BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13418
(159 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5T653|RM02_HUMAN 39S ribosomal protein L2, mitochondrial OS=Homo sapiens GN=MRPL2
PE=1 SV=2
Length = 305
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 101/160 (63%), Gaps = 4/160 (2%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTD-DSPPLEERVIQIIPSPAPTVRTANLALVGSGD 59
R+ V G+GGG K+ + R P + S P EE+VIQ+ P R+A++ALV G
Sbjct: 90 RIRVHGIGGGHKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPC---RSADIALVAGGS 146
Query: 60 FLKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ I+ATENM+AGD + S I R+ V A+EGDA+P+GALP+G+++ VE PG GA Y
Sbjct: 147 RKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQY 206
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
RAAG L+R ++ ++QLPSK ++ V + C+A V +
Sbjct: 207 IRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLETCVATVGR 246
>sp|Q2TA12|RM02_BOVIN 39S ribosomal protein L2, mitochondrial OS=Bos taurus GN=MRPL2 PE=1
SV=2
Length = 306
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPP--LEERVIQIIPSPAPTVRTANLALVGSG 58
R+ V G+GGG K+ + R P +S P EE+VI + P R+A++ALV G
Sbjct: 90 RIQVHGIGGGHKQRYRMIDFLRFRPEQESKPGPFEEKVIVVRYDPC---RSADIALVAGG 146
Query: 59 DFLKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAH 118
+ + I+ATENMKAGD + S I R+ V A+EGDA+P+GALP+G+++ VE PG GA
Sbjct: 147 NRKRWIIATENMKAGDTILNSDHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQ 206
Query: 119 YARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
Y RAAG L+R ++ ++QLPSK ++ V + C A V +
Sbjct: 207 YIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLETCTATVGR 247
>sp|Q9D773|RM02_MOUSE 39S ribosomal protein L2, mitochondrial OS=Mus musculus GN=Mrpl2
PE=2 SV=1
Length = 306
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPP--LEERVIQIIPSPAPTVRTANLALVGSG 58
R+ V G+GGG K++ + R P + P EE+V+ + P R+A++ALV G
Sbjct: 90 RIRVHGIGGGHKQNYRMIDFLRFRPEKEKAPEPFEEKVVVVRYDP---CRSADIALVAGG 146
Query: 59 DFLKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAH 118
+ I+ATENMKAGD + S I R+ V A+EGDA+P+GALP+G+++ VE PG GA
Sbjct: 147 SRKRWIIATENMKAGDTILNSNHIGRMAVAAQEGDAHPLGALPVGTLINNVESEPGRGAQ 206
Query: 119 YARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
Y RAAG L+R ++ ++QLPSK ++ V + C A V +
Sbjct: 207 YIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLESCTATVGR 247
>sp|Q498T4|RM02_RAT 39S ribosomal protein L2, mitochondrial OS=Rattus norvegicus
GN=Mrpl2 PE=2 SV=1
Length = 304
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPP--LEERVIQIIPSPAPTVRTANLALVGSG 58
R+ V G+GGG K++ + R P + P EE+V+ + P R+A++ALV G
Sbjct: 88 RIRVHGIGGGHKQNYRMIDFLRFRPEKGTEPEPFEEKVVVVRYDP---CRSADIALVAGG 144
Query: 59 DFLKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAH 118
+ I+ATENMKAGD + S I R+ V A+EGDA+P+GALP+G+++ VE PG GA
Sbjct: 145 SRKRWIIATENMKAGDTILNSNHIGRMAVAAQEGDAHPLGALPVGTLINNVESEPGRGAQ 204
Query: 119 YARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
Y RAAG L+R ++ ++QLPSK ++ V + C A V +
Sbjct: 205 YIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLESCTATVGR 245
>sp|Q3J8R7|RL2_NITOC 50S ribosomal protein L2 OS=Nitrosococcus oceani (strain ATCC 19707
/ NCIMB 11848) GN=rplB PE=3 SV=1
Length = 274
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V GGG K ++ + DFRR D + RV +I P R+A++AL+ D
Sbjct: 48 RITVRHCGGGHKR-LYRIIDFRRDKID----VLGRVKRIEYDPN---RSAHIALINYSDG 99
Query: 61 LK-LILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
K I+A + +K GDI+ + P ++G+ P+ +P+G++V C+E PG+GA
Sbjct: 100 EKRYIIAPKAVKVGDIITSGREAP-----IRDGNCLPLRNIPVGTLVHCIELKPGKGAQI 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG+SC LV D +L+L S V C A + +
Sbjct: 155 ARSAGSSCQLVAREGDHAMLRLRSGEIRKVPLECRATIGE 194
>sp|B6JET6|RL2_OLICO 50S ribosomal protein L2 OS=Oligotropha carboxidovorans (strain
ATCC 49405 / DSM 1227 / OM5) GN=rplB PE=3 SV=1
Length = 278
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V GGG K+ + DF+R D P ER ++ P+ RTA +AL+ D
Sbjct: 48 RITVRFRGGGHKQTYRLI-DFKRTKVD-VPATVER-LEYDPN-----RTAFIALIKYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
L ILA + + GD + + V K G+A P+G +P+G+IV VE G+G
Sbjct: 100 ELSYILAPQRLAVGDTVVAGSY-----VDVKPGNAMPMGNMPVGTIVHNVEMKIGKGGQM 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVA 158
AR+AG +V HD V+L+L S + V CMA +
Sbjct: 155 ARSAGTYAQIVGRDHDYVILRLNSGEQRMVHGRCMATIG 193
>sp|Q21M54|RL2_SACD2 50S ribosomal protein L2 OS=Saccharophagus degradans (strain 2-40 /
ATCC 43961 / DSM 17024) GN=rplB PE=3 SV=1
Length = 275
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 82/160 (51%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ +GGG K+ + V DFRR D P + ++ P+ RTA +ALV D
Sbjct: 48 RITTRHIGGGHKQH-YRVIDFRR--NKDGIPAKVERLEYDPN-----RTAYIALVCYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ I+A + +KAGD++++ P K G+A P+ +P+GS+V C+E PG+GA
Sbjct: 100 ERRYIIAPKGVKAGDVIQSGDAAP-----IKPGNALPLRNIPVGSVVHCIEMKPGKGAQI 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG S LV L+L S + C A + +
Sbjct: 155 ARSAGTSVQLVAREGQYCTLRLRSGEMRKILSECRATLGE 194
>sp|Q7MPI5|RL2_VIBVY 50S ribosomal protein L2 OS=Vibrio vulnificus (strain YJ016)
GN=rplB PE=3 SV=1
Length = 274
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 14/144 (9%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V +GGG K+ V DF+R T D P + ++ P+ R+AN+ALV D
Sbjct: 48 RITVRHIGGGHKQHYRVV-DFKR--TKDGIPAKVERLEYDPN-----RSANIALVLYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ I+A + M+AGD++++ + P K G+ P+ +P+GS + CVE PG+GA
Sbjct: 100 ERRYIIAPKGMQAGDVIQSGVDAP-----IKAGNTLPMRNIPVGSTIHCVELTPGKGAQL 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPS 143
AR+AG LV V ++L S
Sbjct: 155 ARSAGAYAQLVARDGSYVTIRLRS 178
>sp|Q8DE42|RL2_VIBVU 50S ribosomal protein L2 OS=Vibrio vulnificus (strain CMCP6)
GN=rplB PE=3 SV=1
Length = 274
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 14/144 (9%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V +GGG K+ V DF+R T D P + ++ P+ R+AN+ALV D
Sbjct: 48 RITVRHIGGGHKQHYRVV-DFKR--TKDGIPAKVERLEYDPN-----RSANIALVLYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ I+A + M+AGD++++ + P K G+ P+ +P+GS + CVE PG+GA
Sbjct: 100 ERRYIIAPKGMQAGDVIQSGVDAP-----IKAGNTLPMRNIPVGSTIHCVELTPGKGAQL 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPS 143
AR+AG LV V ++L S
Sbjct: 155 ARSAGAYAQLVARDGSYVTIRLRS 178
>sp|A6W389|RL2_MARMS 50S ribosomal protein L2 OS=Marinomonas sp. (strain MWYL1) GN=rplB
PE=3 SV=1
Length = 274
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ +GGG K+ V DFRR S +E ++ P+ R+AN+AL+ D
Sbjct: 48 RITTRHVGGGHKQHYRMV-DFRRNKDGISAVVER--LEYDPN-----RSANIALIRYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ I+A++ M AG+I+ + P K G+ P+ +P+GS V CVE PG+GA
Sbjct: 100 ERRYIIASKGMVAGNIVFSGADAP-----IKAGNTLPLQNIPVGSTVHCVELKPGKGAQV 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG S LV V L+L S V C A + +
Sbjct: 155 ARSAGASAQLVAREGRYVTLRLRSGEMRKVLTECRATLGE 194
>sp|B6IRQ9|RL2_RHOCS 50S ribosomal protein L2 OS=Rhodospirillum centenum (strain ATCC
51521 / SW) GN=rplB PE=3 SV=1
Length = 275
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGD- 59
R+ +GGG K V DF+R D P ER ++ P+ RTA +AL+ D
Sbjct: 48 RITARRMGGGHKRRYRLV-DFKRRMKPDMPATVER-LEYDPN-----RTAFIALIRYTDG 100
Query: 60 FLKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
L ILA + +KAGD + + V K G+A P+ +P+G+IV VE PG+G
Sbjct: 101 TLAYILAPQRLKAGDTVVSGE-----KVDVKPGNAMPLRNIPVGTIVHNVELKPGKGGQL 155
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVA 158
ARAAG LV L+LPS V C A +
Sbjct: 156 ARAAGTYLQLVGRDQGYAQLKLPSGELRVVRGECFATIG 194
>sp|Q2RFQ0|RL2_MOOTA 50S ribosomal protein L2 OS=Moorella thermoacetica (strain ATCC
39073) GN=rplB PE=3 SV=1
Length = 276
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V GGG K ++ V DF+R D P I+ P+ R+AN+AL+ D
Sbjct: 48 RLTVRHRGGGHKR-LYRVIDFKR--DKDGIPGRVATIEYDPN-----RSANIALINYADG 99
Query: 61 LK-LILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
K ILA EN++ GD I K G+A P+ +P+G++V VE PG+G
Sbjct: 100 EKRYILAPENLQVGD-----QVISGPEADIKVGNALPLSQIPVGTMVHNVELKPGKGGQM 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG L+ +L+LPS V + C A V Q
Sbjct: 155 ARSAGAGAQLMAKEGGYALLRLPSGEVRKVQESCRATVGQ 194
>sp|Q47JA0|RL2_DECAR 50S ribosomal protein L2 OS=Dechloromonas aromatica (strain RCB)
GN=rplB PE=3 SV=1
Length = 275
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V GGG K+ + V DF+R D P + ++ P+ RTAN+AL+ D
Sbjct: 48 RITVRHQGGGHKQ-AYRVIDFKR--NKDGIPAKVERLEYDPN-----RTANIALLCYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ I+A + M G + + P K G+A P+ +P+G+ +CCVE PG+GA
Sbjct: 100 ERRYIIANKGMVVGQPIMSGSEAP-----IKSGNALPIRNIPVGTTICCVEMLPGKGAQL 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG S L+ ++L S V C A + +
Sbjct: 155 ARSAGTSVQLLAREGTYAQIRLRSGEVRRVHVECRATIGE 194
>sp|Q7UZV0|RL2_PROMP 50S ribosomal protein L2 OS=Prochlorococcus marinus subsp. pastoris
(strain CCMP1986 / MED4) GN=rplB PE=3 SV=1
Length = 287
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 74/153 (48%), Gaps = 14/153 (9%)
Query: 8 GGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDFLK-LILA 66
GGG K V DFRR D + +V I P R A LAL+ D K I+A
Sbjct: 55 GGGHKRQYRLV-DFRR----DKKNINAKVAAIHYDPH---RNARLALLFYEDGEKRYIIA 106
Query: 67 TENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGNS 126
+K G + + +P +EG+A P+ ++P+GS V CVE + G GA R+AG S
Sbjct: 107 PAGIKVGQNVISGEGVP-----IEEGNAMPLSSMPLGSNVHCVELYAGRGAQMVRSAGAS 161
Query: 127 CTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
L+ + V L+LPS V K C A + +
Sbjct: 162 AQLMAKEGEYVALKLPSTEVRLVRKECYATLGE 194
>sp|Q3IF22|RL2_PSEHT 50S ribosomal protein L2 OS=Pseudoalteromonas haloplanktis (strain
TAC 125) GN=rplB PE=3 SV=1
Length = 274
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V +GGG K+ + DF+R T D P ++ P+ R+AN+ALV D
Sbjct: 48 RITVRHIGGGHKQHYRLI-DFKR--TKDGIPATVERLEYDPN-----RSANIALVLYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ I+A + +KAGD +++ + P K G+A P+ +P+GS V VE PG+GA
Sbjct: 100 ERRYIIAPKGLKAGDAIQSGVDAP-----IKPGNALPMRNMPVGSTVHNVELKPGKGAQI 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG ++ V L+L S V+ C A + +
Sbjct: 155 ARSAGAYVQILARDGQYVTLRLRSGEVRKVEADCRATLGE 194
>sp|A3Q985|RL2_SHELP 50S ribosomal protein L2 OS=Shewanella loihica (strain ATCC
BAA-1088 / PV-4) GN=rplB PE=3 SV=1
Length = 275
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V +GGG K+ V DF+R D P + ++ P+ RTAN+ALV D
Sbjct: 48 RITVRHVGGGHKQHYRIV-DFKR--NKDGIPAKVERLEYDPN-----RTANIALVLYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ ILA + M+AGD +++ I K G+A P+ +P+GS+V VE PG+GA
Sbjct: 100 ERRYILAAKGMQAGDQIQSG-----IDAEIKAGNALPLRNIPVGSVVHAVEMKPGKGAQI 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG +V L+L S V C A + +
Sbjct: 155 ARSAGTYVQVVARDGAYATLRLRSGEMRKVPVDCRATLGE 194
>sp|Q1QN27|RL2_NITHX 50S ribosomal protein L2 OS=Nitrobacter hamburgensis (strain X14 /
DSM 10229) GN=rplB PE=3 SV=1
Length = 277
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V GGG K+ V DF+RG +D P + ER ++ P+ RTA +AL+ D
Sbjct: 48 RITVRFRGGGHKQAYRNV-DFKRG-KEDVPAIVER-LEYDPN-----RTAFIALIKYQDG 99
Query: 61 LK-LILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ ILA + + GD + + V K G+ P+G +P+G+IV VE G+G
Sbjct: 100 EQAYILAPQRLAVGDTVVAGNY-----VDVKPGNVMPLGNMPVGTIVHNVEMKIGKGGQL 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVA 158
AR+AG +V HD V+L+L S + V C +
Sbjct: 155 ARSAGTYAQIVGRDHDYVILRLNSGEQRLVHGRCRGAIG 193
>sp|C4L7T3|RL2_TOLAT 50S ribosomal protein L2 OS=Tolumonas auensis (strain DSM 9187 /
TA4) GN=rplB PE=3 SV=1
Length = 273
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ +GGG K+ + DF+R D P + ++ P+ R+AN+ALV D
Sbjct: 48 RITTRHIGGGHKQHYRLI-DFKR--NKDGIPAKIERLEYDPN-----RSANIALVLYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ ILA +N+KAGD + + + P K G+A P+ +P+G+ V VE PG+GA
Sbjct: 100 ERRYILAPKNLKAGDPIVSGVDAP-----IKAGNALPMRNIPVGTTVHAVEMKPGKGAQI 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG S ++ V L+L S V C A V +
Sbjct: 155 ARSAGASVQILAREGAYVTLRLRSGEVRKVLAECRATVGE 194
>sp|A8G1E5|RL2_SHESH 50S ribosomal protein L2 OS=Shewanella sediminis (strain HAW-EB3)
GN=rplB PE=3 SV=1
Length = 275
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V +GGG K+ + DF+R D P + ++ P+ RTAN+ALV D
Sbjct: 48 RITVRHIGGGHKQHYRII-DFKR--IKDGIPAKVERLEYDPN-----RTANIALVLYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ ILA + M+AGD +++ I K G+A P+ +P+GS+V VE PG+GA
Sbjct: 100 ERRYILAAKGMQAGDPIQSG-----IDAEIKVGNALPLRNIPIGSVVHAVEMKPGKGAQI 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG +V + L+L S V C A + +
Sbjct: 155 ARSAGTYVQVVARDGEYATLRLRSGEMRKVPVDCRATLGE 194
>sp|C3LRQ5|RL2_VIBCM 50S ribosomal protein L2 OS=Vibrio cholerae serotype O1 (strain
M66-2) GN=rplB PE=3 SV=1
Length = 274
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 80/144 (55%), Gaps = 14/144 (9%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V +GGG K+ V DF+R T D P + ++ P+ R+AN+ALV D
Sbjct: 48 RITVRHIGGGHKQHYRLV-DFKR--TKDGIPAKVERLEYDPN-----RSANIALVLYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ I+A + ++AGD++++ P P++A G+A P+ +P+GS + VE PG+GA
Sbjct: 100 ERRYIIAPKGLQAGDVIQSG---PDAPIKA--GNAMPMRNIPVGSTIHNVELTPGKGAQL 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPS 143
AR+AG LV V L+L S
Sbjct: 155 ARSAGAYAQLVARDGAYVTLRLRS 178
>sp|Q9KNY7|RL2_VIBCH 50S ribosomal protein L2 OS=Vibrio cholerae serotype O1 (strain
ATCC 39315 / El Tor Inaba N16961) GN=rplB PE=3 SV=1
Length = 274
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 80/144 (55%), Gaps = 14/144 (9%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V +GGG K+ V DF+R T D P + ++ P+ R+AN+ALV D
Sbjct: 48 RITVRHIGGGHKQHYRLV-DFKR--TKDGIPAKVERLEYDPN-----RSANIALVLYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ I+A + ++AGD++++ P P++A G+A P+ +P+GS + VE PG+GA
Sbjct: 100 ERRYIIAPKGLQAGDVIQSG---PDAPIKA--GNAMPMRNIPVGSTIHNVELTPGKGAQL 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPS 143
AR+AG LV V L+L S
Sbjct: 155 ARSAGAYAQLVARDGAYVTLRLRS 178
>sp|A5F546|RL2_VIBC3 50S ribosomal protein L2 OS=Vibrio cholerae serotype O1 (strain
ATCC 39541 / Ogawa 395 / O395) GN=rplB PE=3 SV=1
Length = 274
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 80/144 (55%), Gaps = 14/144 (9%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V +GGG K+ V DF+R T D P + ++ P+ R+AN+ALV D
Sbjct: 48 RITVRHIGGGHKQHYRLV-DFKR--TKDGIPAKVERLEYDPN-----RSANIALVLYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ I+A + ++AGD++++ P P++A G+A P+ +P+GS + VE PG+GA
Sbjct: 100 ERRYIIAPKGLQAGDVIQSG---PDAPIKA--GNAMPMRNIPVGSTIHNVELTPGKGAQL 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPS 143
AR+AG LV V L+L S
Sbjct: 155 ARSAGAYAQLVARDGAYVTLRLRS 178
>sp|Q211F1|RL2_RHOPB 50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain
BisB18) GN=rplB PE=3 SV=1
Length = 277
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+VV GGG K+ V DF+R D P + ER ++ P+ RTA +AL+ D
Sbjct: 48 RIVVRFRGGGHKQTYRIV-DFKRTKVD-MPAVVER-LEYDPN-----RTAFIALIKYTDG 99
Query: 61 LK-LILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ ILA + + GD + + V K G+ P+G +P+G+IV VE G+G
Sbjct: 100 TQAYILAPQRLAVGDTVLAGAY-----VDVKPGNVMPLGNMPIGTIVHNVELKIGKGGQI 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVA 158
AR+AG LV HD V+++L S + V C A +
Sbjct: 155 ARSAGTYAQLVGRDHDYVIVRLNSGEQRLVHGRCTATIG 193
>sp|A4YSJ5|RL2_BRASO 50S ribosomal protein L2 OS=Bradyrhizobium sp. (strain ORS278)
GN=rplB PE=3 SV=1
Length = 277
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V LGGG K+ V DF+R D P ER ++ P+ RTA +ALV D
Sbjct: 48 RITVRFLGGGHKQSYRTV-DFKRDKVD-VPATVER-LEYDPN-----RTAFIALVKYQDG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
L ILA + + GD + + V K G+ P+G +P+G+IV +E G+G
Sbjct: 100 ELAYILAPQRLAVGDTIVAGNY-----VDVKPGNVMPLGNMPVGTIVHNIEVKIGKGGQL 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVA 158
AR+AG LV HD V+++L S + V C +
Sbjct: 155 ARSAGTYAQLVGRDHDYVIVRLNSGEQRLVHGRCRGTIG 193
>sp|B0TM09|RL2_SHEHH 50S ribosomal protein L2 OS=Shewanella halifaxensis (strain
HAW-EB4) GN=rplB PE=3 SV=1
Length = 275
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V +GGG K+ + DF+R D P + ++ P+ RTAN+ALV D
Sbjct: 48 RITVRHIGGGHKQHYRLI-DFKR--NKDGIPAKVERLEYDPN-----RTANIALVLYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ ILA + M+AGD +++ I K G+A P+ +P+GS+V VE PG+GA
Sbjct: 100 ERRYILAAKGMQAGDKIQSG-----IDAEIKSGNAMPLRNIPVGSVVHAVEMKPGKGAQI 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG ++ L+L S V C A + +
Sbjct: 155 ARSAGAYVQVIARDGAYATLRLRSGEMRKVPVDCRATLGE 194
>sp|B1KMY0|RL2_SHEWM 50S ribosomal protein L2 OS=Shewanella woodyi (strain ATCC 51908 /
MS32) GN=rplB PE=3 SV=1
Length = 275
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V +GGG K+ + DF+R D P + ++ P+ RTAN+ALV D
Sbjct: 48 RITVRHVGGGHKQHYRII-DFKR--IKDGIPAKVERLEYDPN-----RTANIALVLYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ ILA + M+AGD +++ I K G+A P+ +P+GS+V VE PG+GA
Sbjct: 100 ERRYILAAKGMQAGDKIQSG-----IDAEIKVGNALPLRNIPVGSVVHAVEMKPGKGAQI 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG +V + L+L S V C A + +
Sbjct: 155 ARSAGTYVQVVARDGEYATLRLRSGEMRKVPVDCRATMGE 194
>sp|Q3SSW3|RL2_NITWN 50S ribosomal protein L2 OS=Nitrobacter winogradskyi (strain Nb-255
/ ATCC 25391) GN=rplB PE=3 SV=1
Length = 277
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 79/159 (49%), Gaps = 14/159 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V GGG K+ V DF+RG TD P + ER ++ P+ RTA +AL+ D
Sbjct: 48 RITVRFRGGGHKQAYRNV-DFKRGKTD-VPAVVER-LEYDPN-----RTAFIALIKYQDG 99
Query: 61 LK-LILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ ILA + M GD + + V K G+ P+G +P+G+IV VE G+G
Sbjct: 100 EQAYILAPQRMAVGDTVVAGNY-----VDVKPGNVMPLGNMPVGTIVHNVEMKIGKGGQL 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVA 158
AR+AG +V D V+L+L S + V C +
Sbjct: 155 ARSAGTYAQIVGRDQDYVILRLNSGEQRLVHGRCRGAIG 193
>sp|B4S094|RL2_ALTMD 50S ribosomal protein L2 OS=Alteromonas macleodii (strain DSM 17117
/ Deep ecotype) GN=rplB1 PE=3 SV=1
Length = 274
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ +GGG K+ + V DF+R D P + ++ P+ R+AN+ALV D
Sbjct: 48 RITTRHIGGGHKQH-YRVIDFKR--NKDGIPAKVERLEYDPN-----RSANIALVLYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ ILA + MKAGD +++ P K G+ P+ +P+G++V +E PG+GA
Sbjct: 100 ERRYILAPKGMKAGDAIQSGSGAP-----IKSGNTLPMRNIPVGTVVHAIEMKPGKGAQI 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG ++ + V L+L S V C A + +
Sbjct: 155 ARSAGAYAQILARDGNYVTLRLRSGEMRKVLSDCRATIGE 194
>sp|Q487Z6|RL2_COLP3 50S ribosomal protein L2 OS=Colwellia psychrerythraea (strain 34H /
ATCC BAA-681) GN=rplB PE=3 SV=1
Length = 274
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V +GGG K+ V DF+R D P + ++ P+ R+AN+ALV D
Sbjct: 48 RITVRHIGGGHKQHYRIV-DFKR--LKDGIPAKVERLEYDPN-----RSANIALVLYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ ILA + + AGD + + + P K G+ P+ +P+GS++ +E PG+GA
Sbjct: 100 ERRYILAPKGLSAGDSILSGVGAP-----IKPGNTMPLRNIPLGSVIHAIELKPGKGAQI 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
ARAAG LV V L+L S ++ C A + +
Sbjct: 155 ARAAGTYAQLVAKDGAYVTLRLRSGEMRKIESDCRATLGE 194
>sp|A2BYT3|RL2_PROM5 50S ribosomal protein L2 OS=Prochlorococcus marinus (strain MIT
9515) GN=rplB PE=3 SV=1
Length = 287
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 8 GGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDFLK-LILA 66
GGG K V DFRR D + +V I P R A LAL+ D K I+A
Sbjct: 55 GGGHKRQYRLV-DFRR----DKRNINAKVAAIHYDPH---RNARLALLFYEDGEKRYIIA 106
Query: 67 TENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGNS 126
+K G + + +P ++G+A P+ +P+GS V CVE + G GA R+AG S
Sbjct: 107 PAGIKVGQNVISGDSVP-----IEDGNAMPLSVMPLGSSVHCVELYAGRGAQMVRSAGAS 161
Query: 127 CTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
L+ D V L+LPS V K C A + +
Sbjct: 162 AQLMAKEGDYVALKLPSTEVRLVRKECYATLGE 194
>sp|Q3A9R9|RL2_CARHZ 50S ribosomal protein L2 OS=Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008) GN=rplB PE=3 SV=1
Length = 274
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V GGG K ++ + DF+R D P + I+ P+ RTA +AL+ D
Sbjct: 48 RLTVRHRGGGHKR-MYRIIDFKR--NKDGIPAKVVAIEYDPN-----RTARIALLAYADG 99
Query: 61 LK-LILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
K I+A +K GD+L M P + K G+A P+ +P+G++V +E +PG+G
Sbjct: 100 EKRYIIAPHGLKVGDVL---MSGPDADI--KVGNALPLANIPVGTLVHNIELYPGKGGQL 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
RAAG + L+ +L+LPS V C A + Q
Sbjct: 155 VRAAGTAAQLLGKEGRYAILRLPSGEMRKVLLECRATIGQ 194
>sp|Q9HPD1|RL2_HALSA 50S ribosomal protein L2P OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=rpl2p PE=3 SV=3
Length = 240
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 26 TDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDFLKLILATENMKAGDILKTSMFIPRI 85
T+D+ L VI + PA + A +A D +L+LA+E + GD ++ I
Sbjct: 33 TEDTDVLAGEVIDVEHDPARSAPVARVAF--EDDDQRLVLASEGVGVGDTIEIG-----I 85
Query: 86 PVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLVRTLHDRVVLQLPSKH 145
+EG+ P+ +P G VC VE PG+G +ARA G + LV D +++LPS
Sbjct: 86 SATIEEGNTLPLAEIPEGVPVCNVESHPGDGGKFARAGGVNADLVTHERDATIVELPSGE 145
Query: 146 EVAVDKHCMAVVA 158
+ C A +
Sbjct: 146 TKRLSPDCRATIG 158
>sp|B0R659|RL2_HALS3 50S ribosomal protein L2P OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=rpl2p PE=3 SV=1
Length = 240
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 26 TDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDFLKLILATENMKAGDILKTSMFIPRI 85
T+D+ L VI + PA + A +A D +L+LA+E + GD ++ I
Sbjct: 33 TEDTDVLAGEVIDVEHDPARSAPVARVAF--EDDDQRLVLASEGVGVGDTIEIG-----I 85
Query: 86 PVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLVRTLHDRVVLQLPSKH 145
+EG+ P+ +P G VC VE PG+G +ARA G + LV D +++LPS
Sbjct: 86 SATIEEGNTLPLAEIPEGVPVCNVESHPGDGGKFARAGGVNADLVTHERDATIVELPSGE 145
Query: 146 EVAVDKHCMAVVA 158
+ C A +
Sbjct: 146 TKRLSPDCRATIG 158
>sp|A8GYX9|RL2_SHEPA 50S ribosomal protein L2 OS=Shewanella pealeana (strain ATCC 700345
/ ANG-SQ1) GN=rplB PE=3 SV=1
Length = 275
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V +GGG K+ + DF+R D P + ++ P+ RTAN+ALV D
Sbjct: 48 RITVRHIGGGHKQHYRLI-DFKR--NKDGIPAKVERLEYDPN-----RTANIALVLYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ ILA + MKAGD +++ I K G+A P+ +P+GS+V VE P +GA
Sbjct: 100 ERRYILAAKGMKAGDKIQSG-----IDAEIKSGNALPLRNIPVGSVVHAVEMKPAKGAQI 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG ++ L+L S V C A + +
Sbjct: 155 ARSAGAYVQVIARDGAYATLRLRSGEMRKVPVDCRATLGE 194
>sp|A6T3K1|RL2_JANMA 50S ribosomal protein L2 OS=Janthinobacterium sp. (strain
Marseille) GN=rplB PE=3 SV=1
Length = 275
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 7 LGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF-LKLIL 65
+GGG K+ + V DF+R T D P + I+ P+ RTAN+ALV D + I+
Sbjct: 54 IGGGHKQH-YRVIDFKR--TKDGIPAKVERIEYDPN-----RTANIALVLYADGERQYII 105
Query: 66 ATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGN 125
AT+ M GD L P K G+ P+ +P+G+++ CVE PG+GA AR AG
Sbjct: 106 ATKGMAVGDQLMNGSEAP-----IKSGNCLPIRNIPVGTVMHCVEMLPGKGAQMARTAGA 160
Query: 126 SCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
L+ ++L S V C A V +
Sbjct: 161 GVVLMAREGTYAQVRLRSGEVRRVHIECRATVGE 194
>sp|B3PK40|RL2_CELJU 50S ribosomal protein L2 OS=Cellvibrio japonicus (strain Ueda107)
GN=rplB PE=3 SV=1
Length = 275
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ +GGG K+ V DFRR D P ER I+ P+ RTA +ALV D
Sbjct: 48 RITTRHVGGGHKQHYRIV-DFRRN-KDGIPATVER-IEYDPN-----RTAYIALVVYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ I+A + + AGD +++ K G+ PV +P+GS++ CVE PG+GA
Sbjct: 100 ERRYIIAPKGLSAGDKIESGNAAA-----IKVGNTLPVRNIPLGSVIHCVELKPGKGAQL 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG S LV V L+L S V C A + +
Sbjct: 155 ARSAGASAQLVAKDGAYVTLRLRSGEMRKVLSDCRATLGE 194
>sp|Q11HQ5|RL2_MESSB 50S ribosomal protein L2 OS=Mesorhizobium sp. (strain BNC1) GN=rplB
PE=3 SV=1
Length = 278
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ GGG K + DF+R D S +E ++ P+ RT +ALV D
Sbjct: 48 RITARFQGGGHKRTYRLI-DFKRRKFDVSGVIER--LEYDPN-----RTGFIALVRYDDG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
L ILA + + AGD + +S V K G+A P+ A+P+G+IV VE PG+G
Sbjct: 100 ELSYILAPQRLAAGDRVISSA----QSVDVKPGNAMPLAAMPVGTIVHNVELKPGKGGQI 155
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVA 158
AR+AG+ LV +L+L S + V CMA V
Sbjct: 156 ARSAGSYAQLVGRDQGMAILRLNSGEQRLVSGTCMATVG 194
>sp|A4G9T5|RL2_HERAR 50S ribosomal protein L2 OS=Herminiimonas arsenicoxydans GN=rplB
PE=3 SV=1
Length = 275
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 7 LGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF-LKLIL 65
+GGG K+ + V DF+R T D P + I+ P+ RTAN+ALV D + I+
Sbjct: 54 IGGGHKQH-YRVIDFKR--TKDGIPAKVERIEYDPN-----RTANIALVLYADGERQYII 105
Query: 66 ATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGN 125
AT+ M GD L P K G+ P+ +P+G+I+ CVE PG+GA AR AG
Sbjct: 106 ATKGMAVGDQLMNGSEAP-----IKSGNCLPIRNIPVGTIMHCVEMLPGKGAQMARTAGA 160
Query: 126 SCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
L+ ++L S V C A V +
Sbjct: 161 GVVLMAREGVYAQVRLRSGEVRRVHIECRATVGE 194
>sp|Q8K953|RL2_BUCAP 50S ribosomal protein L2 OS=Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg) GN=rplB PE=3 SV=1
Length = 273
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ +GGG K I+ + DF+R + + +E + P+ R++N+AL+ D
Sbjct: 48 RITTRHIGGGHKR-IYRIIDFKRNKDNITASIER--FEYDPN-----RSSNIALILYKDG 99
Query: 61 LK-LILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ ILA +N+K GD + + +P K G++ P+ +P+GS + VE PG+G
Sbjct: 100 KRNYILAPKNLKVGDTVISGENVP-----IKIGNSLPIKNIPVGSFIHNVEMRPGKGGQI 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG+ LV + L+L S + +C A + +
Sbjct: 155 ARSAGSYVQLVACDKEYATLRLRSGEMRKTESNCRATIGE 194
>sp|A4VHN3|RL2_PSEU5 50S ribosomal protein L2 OS=Pseudomonas stutzeri (strain A1501)
GN=rplB PE=3 SV=1
Length = 273
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ +GGG K+ V DFRR D P + ER I+ P+ RTA++AL+ D
Sbjct: 48 RITTRHIGGGHKQHYRLV-DFRRN-KDGIPAIVER-IEYDPN-----RTAHIALLKYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ I+A + + AGD L + + P K G++ P+ +P+GS V +E PG+GA
Sbjct: 100 ERRYIIAPKGVSAGDQLVSGINAP-----IKAGNSLPLRNIPLGSTVHGIELKPGKGAQL 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
R+AG S LV V L+L S V C A + +
Sbjct: 155 VRSAGASAQLVAREGSYVTLRLRSGEMRKVLAECRATLGE 194
>sp|B8CND6|RL2_SHEPW 50S ribosomal protein L2 OS=Shewanella piezotolerans (strain WP3 /
JCM 13877) GN=rplB PE=3 SV=1
Length = 275
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ +GGG K+ + DF+R D P + ++ P+ RTAN+ALV D
Sbjct: 48 RITSRHIGGGHKQHYRLI-DFKR--NKDGIPAKVERLEYDPN-----RTANIALVLYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ I+A + MKAGD +++ I K G+A P+ +P+GS+V VE PG+GA
Sbjct: 100 ERRYIIAAKGMKAGDSIQSG-----IDAEIKSGNAMPLRNIPVGSVVHAVEMKPGKGAQI 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG ++ L+L S V C A + +
Sbjct: 155 ARSAGAYVQVIARDGAYATLRLRSGEMRKVPVDCRATLGE 194
>sp|Q318I7|RL2_PROM9 50S ribosomal protein L2 OS=Prochlorococcus marinus (strain MIT
9312) GN=rplB PE=3 SV=1
Length = 287
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 8 GGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDFLK-LILA 66
GGG K V DFRR D + +V I P R A LAL+ D K I+A
Sbjct: 55 GGGHKRQYRLV-DFRR----DKRNINAKVAAIHYDPH---RNARLALLFYEDGEKRYIIA 106
Query: 67 TENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGNS 126
+K G + + +P ++G+A P+ +P+GS V CVE + G GA R+AG S
Sbjct: 107 PAGVKVGQNVISGESVP-----IEDGNAMPLSVMPLGSSVHCVELYAGRGAQMVRSAGAS 161
Query: 127 CTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
++ D V L+LPS V K C A + +
Sbjct: 162 AQVMAKEGDYVALKLPSTEVRLVRKECYATLGE 194
>sp|P60400|RL2_CORDI 50S ribosomal protein L2 OS=Corynebacterium diphtheriae (strain
ATCC 700971 / NCTC 13129 / Biotype gravis) GN=rplB PE=3
SV=1
Length = 280
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 2 VVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDFL 61
+ V GGG K + DFRR D P +V I P RTAN+AL+ D
Sbjct: 49 ITVRHKGGGHKRQYRLI-DFRRNDKDGIP---AKVAHIEYDPN---RTANIALLHYVDGE 101
Query: 62 K-LILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYA 120
K I+A + ++ G ++++ + K G+ P+ +P G+ + CVE PG GA A
Sbjct: 102 KRYIIAPKGLQQGQMIESG-----VNADIKVGNNLPLRNIPAGTTIHCVELKPGAGAKLA 156
Query: 121 RAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
R+AG S L+ VL++PS VD C A V +
Sbjct: 157 RSAGASIQLLGKAGKYAVLRMPSSEIRRVDIRCRATVGE 195
>sp|A3PF44|RL2_PROM0 50S ribosomal protein L2 OS=Prochlorococcus marinus (strain MIT
9301) GN=rplB PE=3 SV=1
Length = 287
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 8 GGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDFLK-LILA 66
GGG K V DFRR D + +V I P R A LAL+ D K I+A
Sbjct: 55 GGGHKRQYRLV-DFRR----DKRNINAKVAAIHYDPH---RNARLALLFYEDGEKRYIIA 106
Query: 67 TENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGNS 126
+K G + + +P ++G+A P+ +P+GS V CVE + G GA R+AG S
Sbjct: 107 PAGVKVGQNVISGESVP-----IEDGNAMPLSVMPLGSSVHCVELYAGRGAQMVRSAGAS 161
Query: 127 CTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
++ D V L+LPS V K C A + +
Sbjct: 162 AQVMAKEGDYVALKLPSTEVRLVRKECYATLGE 194
>sp|Q6LVB3|RL2_PHOPR 50S ribosomal protein L2 OS=Photobacterium profundum GN=rplB PE=3
SV=1
Length = 275
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V +GGG K+ + DF+R T D P + ++ P+ R+AN+ALV D
Sbjct: 48 RITVRHIGGGNKQHYRLI-DFKR--TKDGIPAKVERLEYDPN-----RSANIALVLYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ I+A + + AGD++++ K G+ P+ +P+GS V CVE PG+GA
Sbjct: 100 ERRYIIAPKGVSAGDMIQSGE-----DAAIKVGNTLPMRNIPVGSTVHCVELKPGKGAQL 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG ++ V L+L S V C A + +
Sbjct: 155 ARSAGAYAQIIARTGTYVTLRLRSGEMRKVLSECRATLGE 194
>sp|A8MLE3|RL2_ALKOO 50S ribosomal protein L2 OS=Alkaliphilus oremlandii (strain OhILAs)
GN=rplB PE=3 SV=1
Length = 276
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 13/152 (8%)
Query: 9 GGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDFLK-LILAT 67
GG ++ + + DF+R D P + I+ P+ R+AN+AL+ D K I+A
Sbjct: 55 GGAQKRHYRIIDFKR--NKDGVPAKVATIEYDPN-----RSANIALLHYVDGEKRYIIAP 107
Query: 68 ENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGNSC 127
+ +K GD++++ P + K G+A P+ +P+G+++ +E PG+GA RAAGNS
Sbjct: 108 QGLKVGDMVESG---PNADI--KTGNALPLANIPVGTMIHNIEMKPGKGAQLVRAAGNSA 162
Query: 128 TLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
L+ +++LPS + C A + Q
Sbjct: 163 QLMAKEGKHALVRLPSTEVRYLPIDCKATIGQ 194
>sp|C5BQ64|RL2_TERTT 50S ribosomal protein L2 OS=Teredinibacter turnerae (strain ATCC
39867 / T7901) GN=rplB PE=3 SV=1
Length = 275
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGD- 59
R+ +GGG K+ + DF+R D P + ++ P+ RTA++ALV D
Sbjct: 48 RITTRHIGGGHKQHYRKI-DFKR--NKDGIPAKVERLEYDPN-----RTAHIALVCYADG 99
Query: 60 FLKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ I+A + +KAGD +++ K G+ P+ +P+GS++ C+E PG+GA
Sbjct: 100 ERRYIIAPKGLKAGDFIESGDASA-----IKVGNTLPLRNVPVGSVIHCIELKPGKGAQL 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG S LV L+L S V+ C A + +
Sbjct: 155 ARSAGASVQLVAREGQYATLRLRSGEMRKVEVECRATLGE 194
>sp|A8G759|RL2_PROM2 50S ribosomal protein L2 OS=Prochlorococcus marinus (strain MIT
9215) GN=rplB PE=3 SV=1
Length = 287
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 8 GGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDFLK-LILA 66
GGG K V DFRR D + +V I P R A LAL+ D K I+A
Sbjct: 55 GGGHKRQYRLV-DFRR----DKRNINAKVAAIHYDPH---RNARLALLFYEDGEKRYIIA 106
Query: 67 TENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGNS 126
+K G + + +P ++G+A P+ +P+GS V CVE + G GA R+AG S
Sbjct: 107 PAGVKVGQNVISGESVP-----IEDGNAMPLSVMPLGSSVHCVELYAGRGAQMVRSAGAS 161
Query: 127 CTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
++ D V L+LPS V K C A + +
Sbjct: 162 AQVMAKEGDYVALKLPSTEVRLVRKECYATLGE 194
>sp|B8I7Y2|RL2_CLOCE 50S ribosomal protein L2 OS=Clostridium cellulolyticum (strain ATCC
35319 / DSM 5812 / JCM 6584 / H10) GN=rplB PE=3 SV=1
Length = 277
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V GGG ++ + V DF+R D ++ +V I P RTAN+AL+ D
Sbjct: 48 RITVRHHGGGNRQK-YRVIDFKR----DKDGIKAKVATIEYDPN---RTANIALLNYADG 99
Query: 61 LK-LILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
K ILA +K GD +++ + G+A P+ +P+GS++ +E PG+G
Sbjct: 100 EKRYILAPVGLKVGDFVESGE-----SSDIRTGNALPLANIPVGSMIHNIELKPGKGGQM 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
RAAGN+ L+ + ++LPS V +C A + Q
Sbjct: 155 VRAAGNAAQLMAKEGEYAQIRLPSGEVRMVRINCRATLGQ 194
>sp|A2BTD4|RL2_PROMS 50S ribosomal protein L2 OS=Prochlorococcus marinus (strain AS9601)
GN=rplB PE=3 SV=1
Length = 287
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 8 GGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDFLK-LILA 66
GGG K V DFRR D + +V I P R A LAL+ D K I+A
Sbjct: 55 GGGHKRQYRLV-DFRR----DKRNINAKVAAIHYDPH---RNARLALLFYEDGEKRYIIA 106
Query: 67 TENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGNS 126
+K G + + +P ++G+A P+ +P+GS V CVE + G GA R+AG S
Sbjct: 107 PAGVKVGQNVISGESVP-----IEDGNAMPLSVMPLGSSVHCVELYAGRGAQMVRSAGAS 161
Query: 127 CTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
++ D V L+LPS V K C A + +
Sbjct: 162 AQVMAKEGDYVALKLPSTEVRLVRKECYATLGE 194
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,876,807
Number of Sequences: 539616
Number of extensions: 2481348
Number of successful extensions: 5894
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 4811
Number of HSP's gapped (non-prelim): 1054
length of query: 159
length of database: 191,569,459
effective HSP length: 108
effective length of query: 51
effective length of database: 133,290,931
effective search space: 6797837481
effective search space used: 6797837481
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)