Your job contains 1 sequence.
>psy13418
RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF
LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYA
RAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13418
(159 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0036135 - symbol:mRpL2 "mitochondrial ribosomal pr... 412 1.6e-38 1
ZFIN|ZDB-GENE-050809-12 - symbol:im:6908224 "im:6908224" ... 314 3.9e-28 1
UNIPROTKB|Q5T653 - symbol:MRPL2 "39S ribosomal protein L2... 313 5.0e-28 1
UNIPROTKB|E2RCD7 - symbol:MRPL2 "Uncharacterized protein"... 312 6.4e-28 1
UNIPROTKB|Q2TA12 - symbol:MRPL2 "39S ribosomal protein L2... 310 1.0e-27 1
UNIPROTKB|F1RRN2 - symbol:MRPL2 "Uncharacterized protein"... 307 2.2e-27 1
MGI|MGI:1351622 - symbol:Mrpl2 "mitochondrial ribosomal p... 307 2.2e-27 1
UNIPROTKB|F1NY85 - symbol:MRPL2 "Uncharacterized protein"... 306 2.8e-27 1
RGD|1307147 - symbol:Mrpl2 "mitochondrial ribosomal prote... 304 4.5e-27 1
UNIPROTKB|Q498T4 - symbol:Mrpl2 "39S ribosomal protein L2... 304 4.5e-27 1
WB|WBGene00018932 - symbol:mrpl-2 species:6239 "Caenorhab... 295 4.0e-26 1
UNIPROTKB|C9IY40 - symbol:MRPL2 "39S ribosomal protein L2... 258 3.4e-22 1
UNIPROTKB|Q9KNY7 - symbol:rplB "50S ribosomal protein L2"... 165 3.6e-12 1
TIGR_CMR|CHY_2306 - symbol:CHY_2306 "ribosomal protein L2... 165 3.6e-12 1
TIGR_CMR|VC_2593 - symbol:VC_2593 "ribosomal protein L2" ... 165 3.6e-12 1
TIGR_CMR|CPS_0870 - symbol:CPS_0870 "ribosomal protein L2... 164 4.7e-12 1
TIGR_CMR|SO_0234 - symbol:SO_0234 "ribosomal protein L2" ... 155 5.2e-11 1
TIGR_CMR|DET_0477 - symbol:DET_0477 "ribosomal protein L2... 154 6.9e-11 1
UNIPROTKB|P60422 - symbol:rplB species:83333 "Escherichia... 152 1.1e-10 1
UNIPROTKB|Q9L0D7 - symbol:rplB "50S ribosomal protein L2"... 152 1.2e-10 1
UNIPROTKB|P95052 - symbol:rplB "50S ribosomal protein L2"... 141 2.2e-09 1
TIGR_CMR|GSU_2854 - symbol:GSU_2854 "ribosomal protein L2... 140 2.7e-09 1
UNIPROTKB|Q9AMK8 - symbol:rplB "50S ribosomal protein L2"... 135 1.0e-08 1
TIGR_CMR|SPO_0484 - symbol:SPO_0484 "ribosomal protein L2... 132 2.3e-08 1
GENEDB_PFALCIPARUM|PF11_0337 - symbol:PF11_0337 "50S ribo... 133 2.7e-08 1
UNIPROTKB|Q8II37 - symbol:PF11_0337 "Mitochondrial riboso... 133 2.7e-08 1
UNIPROTKB|P0C495 - symbol:rpl2-A "50S ribosomal protein L... 129 4.6e-08 1
UNIPROTKB|P0C496 - symbol:rpl2-A "50S ribosomal protein L... 129 4.6e-08 1
UNIPROTKB|P0C497 - symbol:rpl2-A "50S ribosomal protein L... 129 4.6e-08 1
UNIPROTKB|Q6EN83 - symbol:rpl2-A "50S ribosomal protein L... 129 4.6e-08 1
UNIPROTKB|K7GRF2 - symbol:RPL8 "Uncharacterized protein" ... 123 6.8e-08 1
UNIPROTKB|E9PKZ0 - symbol:RPL8 "60S ribosomal protein L8"... 123 7.8e-08 1
RGD|1561333 - symbol:RGD1561333 "similar to 60S ribosomal... 126 8.5e-08 1
UNIPROTKB|G3V1A1 - symbol:RPL8 "Ribosomal protein L8, iso... 122 8.7e-08 1
TIGR_CMR|BA_0113 - symbol:BA_0113 "ribosomal protein L2" ... 126 1.0e-07 1
ZFIN|ZDB-GENE-040426-1670 - symbol:rpl8 "ribosomal protei... 125 1.1e-07 1
TIGR_CMR|NSE_0269 - symbol:NSE_0269 "ribosomal protein L2... 125 1.4e-07 1
UNIPROTKB|F1NIX0 - symbol:RPL8 "Uncharacterized protein" ... 124 1.6e-07 1
UNIPROTKB|E9PKU4 - symbol:RPL8 "60S ribosomal protein L8"... 122 1.8e-07 1
UNIPROTKB|K7GNY4 - symbol:RPL8 "Uncharacterized protein" ... 122 1.8e-07 1
UNIPROTKB|Q3T0S6 - symbol:RPL8 "60S ribosomal protein L8"... 123 1.8e-07 1
UNIPROTKB|E2RIA8 - symbol:RPL8 "Uncharacterized protein" ... 123 1.8e-07 1
UNIPROTKB|P62917 - symbol:RPL8 "60S ribosomal protein L8"... 123 1.8e-07 1
UNIPROTKB|F2Z567 - symbol:RPL8 "Uncharacterized protein" ... 123 1.8e-07 1
MGI|MGI:1350927 - symbol:Rpl8 "ribosomal protein L8" spec... 123 1.8e-07 1
RGD|619827 - symbol:Rpl8 "ribosomal protein L8" species:1... 123 1.8e-07 1
UNIPROTKB|K7GSL7 - symbol:RPL8 "Uncharacterized protein" ... 117 3.8e-07 1
UNIPROTKB|E9PIZ3 - symbol:RPL8 "60S ribosomal protein L8"... 117 5.5e-07 1
UNIPROTKB|K7GLA0 - symbol:RPL8 "Uncharacterized protein" ... 117 5.5e-07 1
UNIPROTKB|E1BHY4 - symbol:E1BHY4 "Uncharacterized protein... 117 8.7e-07 1
UNIPROTKB|P0C8K6 - symbol:RPL2 "60S ribosomal protein L2,... 113 4.1e-05 1
UNIPROTKB|P92812 - symbol:RPL2 "60S ribosomal protein L2,... 113 4.1e-05 1
UNIPROTKB|Q2F969 - symbol:RPL2 "60S ribosomal protein L2,... 113 4.1e-05 1
WB|WBGene00004413 - symbol:rpl-2 species:6239 "Caenorhabd... 105 0.00031 1
TIGR_CMR|CBU_0241 - symbol:CBU_0241 "ribosomal protein L2... 105 0.00035 1
ASPGD|ASPL0000011317 - symbol:AN3649 species:162425 "Emer... 105 0.00069 1
TIGR_CMR|CJE_1872 - symbol:CJE_1872 "ribosomal protein L2... 102 0.00094 1
>FB|FBgn0036135 [details] [associations]
symbol:mRpL2 "mitochondrial ribosomal protein L2"
species:7227 "Drosophila melanogaster" [GO:0006412 "translation"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 GO:GO:0006412
GO:GO:0005762 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR13691 HSSP:P04257
EMBL:AY113486 ProteinModelPortal:Q8MYY5 SMR:Q8MYY5 STRING:Q8MYY5
PRIDE:Q8MYY5 FlyBase:FBgn0036135 InParanoid:Q8MYY5
OrthoDB:EOG4QV9TR ArrayExpress:Q8MYY5 Bgee:Q8MYY5 Uniprot:Q8MYY5
Length = 294
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 86/159 (54%), Positives = 109/159 (68%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+V G+GGGIK+ WV R GPT+ + EE V++++ RTA +ALV GD
Sbjct: 75 RLVAKGIGGGIKQQYRWVKWVRDGPTEGAQ--EELVLEVLRDGC---RTAKVALVAVGDE 129
Query: 61 LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYA 120
LK ILATENMKAGDILKTS FIPRIPVR EGDAYP+GALP+G+ + C+EK PG+ H
Sbjct: 130 LKYILATENMKAGDILKTSRFIPRIPVRPNEGDAYPLGALPVGTRIHCLEKNPGQMCHLI 189
Query: 121 RAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AAG T++R ++VV+QLPSK E A + CMA V +
Sbjct: 190 HAAGTFGTILRKFDEKVVVQLPSKREFAFQRTCMATVGR 228
>ZFIN|ZDB-GENE-050809-12 [details] [associations]
symbol:im:6908224 "im:6908224" species:7955 "Danio
rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR002171 InterPro:IPR022666 InterPro:IPR022669
Pfam:PF00181 Pfam:PF03947 ZFIN:ZDB-GENE-050809-12 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR13691
GeneTree:ENSGT00390000000189 EMBL:CABZ01079772 IPI:IPI00992922
Ensembl:ENSDART00000090644 Bgee:E7F8R3 Uniprot:E7F8R3
Length = 294
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 66/162 (40%), Positives = 107/162 (66%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRR---GPTDDSPPLEERVIQIIPSPAPTVRTANLALVGS 57
R+ G+GGG K+ H + DF+R P + P + E+V+++ P R+A++ALV
Sbjct: 78 RIKTHGIGGGHKQR-HRIIDFQRLRSEPGKEQPVMVEKVLEVRYDPC---RSADIALVAG 133
Query: 58 GDFLKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGA 117
G+ + I+A++NM+AGD++++ I R+ V A+EGDA+PVGALP+G+++ +E FPG GA
Sbjct: 134 GNRKRWIIASQNMEAGDLIQSCRGIGRMAVLAQEGDAHPVGALPVGTLIHNLELFPGRGA 193
Query: 118 HYARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
Y RAAG L+R + ++QLPSKH++ V + C+A V +
Sbjct: 194 QYIRAAGTCGVLLRKVSGTAIIQLPSKHQIQVLETCVATVGR 235
>UNIPROTKB|Q5T653 [details] [associations]
symbol:MRPL2 "39S ribosomal protein L2, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AL355385 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 OMA:LVRQECM CTD:51069 HOGENOM:HOG000046229
HOVERGEN:HBG057412 OrthoDB:EOG4H19WF HSSP:P04257 EMBL:AF132956
EMBL:AK314948 EMBL:BC013685 EMBL:BC020212 EMBL:AB051617
IPI:IPI00411816 RefSeq:NP_057034.2 UniGene:Hs.55041
ProteinModelPortal:Q5T653 SMR:Q5T653 IntAct:Q5T653
MINT:MINT-6492891 STRING:Q5T653 PhosphoSite:Q5T653 DMDM:118573672
PaxDb:Q5T653 PRIDE:Q5T653 DNASU:51069 Ensembl:ENST00000388752
GeneID:51069 KEGG:hsa:51069 UCSC:uc003ots.1 GeneCards:GC06M043068
HGNC:HGNC:14056 HPA:HPA007455 MIM:611822 neXtProt:NX_Q5T653
PharmGKB:PA30949 InParanoid:Q5T653 GenomeRNAi:51069 NextBio:53675
ArrayExpress:Q5T653 Bgee:Q5T653 CleanEx:HS_MRPL2
Genevestigator:Q5T653 GermOnline:ENSG00000112651 Uniprot:Q5T653
Length = 305
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 69/160 (43%), Positives = 101/160 (63%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDD-SPPLEERVIQIIPSPAPTVRTANLALVGSGD 59
R+ V G+GGG K+ + R P + S P EE+VIQ+ P R+A++ALV G
Sbjct: 90 RIRVHGIGGGHKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPC---RSADIALVAGGS 146
Query: 60 FLKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ I+ATENM+AGD + S I R+ V A+EGDA+P+GALP+G+++ VE PG GA Y
Sbjct: 147 RKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQY 206
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
RAAG L+R ++ ++QLPSK ++ V + C+A V +
Sbjct: 207 IRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLETCVATVGR 246
>UNIPROTKB|E2RCD7 [details] [associations]
symbol:MRPL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691 CTD:51069
GeneTree:ENSGT00390000000189 OMA:GNRPRSG EMBL:AAEX03008332
RefSeq:XP_532143.2 Ensembl:ENSCAFT00000002798 GeneID:474908
KEGG:cfa:474908 Uniprot:E2RCD7
Length = 306
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 70/161 (43%), Positives = 101/161 (62%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPT-DDSP-PLEERVIQIIPSPAPTVRTANLALVGSG 58
R+ V G+GGG K+ + R P + P P EE+VI + P R+A++ALV G
Sbjct: 90 RIQVHGIGGGHKQRYRMIDFLRFRPELETKPGPFEEKVIMVRYDPC---RSADIALVAGG 146
Query: 59 DFLKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAH 118
+ I+ATENM+AGDI+ S I R+ V A+EGDA+P+GALP+G+++ VE PG GA
Sbjct: 147 SRKRWIVATENMQAGDIILNSDHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQ 206
Query: 119 YARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
Y RAAG L+R ++ ++QLPSK ++ V + CMA V +
Sbjct: 207 YIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLETCMATVGR 247
>UNIPROTKB|Q2TA12 [details] [associations]
symbol:MRPL2 "39S ribosomal protein L2, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 PDB:2FTC PDBsum:2FTC EMBL:BC111173 IPI:IPI00760520
RefSeq:NP_001035617.2 UniGene:Bt.9362 ProteinModelPortal:Q2TA12
STRING:Q2TA12 PRIDE:Q2TA12 Ensembl:ENSBTAT00000016951 GeneID:514403
KEGG:bta:514403 CTD:51069 GeneTree:ENSGT00390000000189
HOGENOM:HOG000046229 HOVERGEN:HBG057412 InParanoid:Q2TA12
OMA:GNRPRSG OrthoDB:EOG4H19WF EvolutionaryTrace:Q2TA12
NextBio:20871316 Uniprot:Q2TA12
Length = 306
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 70/161 (43%), Positives = 101/161 (62%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDS-P-PLEERVIQIIPSPAPTVRTANLALVGSG 58
R+ V G+GGG K+ + R P +S P P EE+VI + P R+A++ALV G
Sbjct: 90 RIQVHGIGGGHKQRYRMIDFLRFRPEQESKPGPFEEKVIVVRYDPC---RSADIALVAGG 146
Query: 59 DFLKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAH 118
+ + I+ATENMKAGD + S I R+ V A+EGDA+P+GALP+G+++ VE PG GA
Sbjct: 147 NRKRWIIATENMKAGDTILNSDHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQ 206
Query: 119 YARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
Y RAAG L+R ++ ++QLPSK ++ V + C A V +
Sbjct: 207 YIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLETCTATVGR 247
>UNIPROTKB|F1RRN2 [details] [associations]
symbol:MRPL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR002171 InterPro:IPR022666 InterPro:IPR022669
Pfam:PF00181 Pfam:PF03947 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 CTD:51069 GeneTree:ENSGT00390000000189
OMA:GNRPRSG EMBL:CR956433 RefSeq:NP_001171996.1 UniGene:Ssc.21783
Ensembl:ENSSSCT00000001849 GeneID:100151914 KEGG:ssc:100151914
Uniprot:F1RRN2
Length = 306
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 69/161 (42%), Positives = 102/161 (63%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDS-P-PLEERVIQIIPSPAPTVRTANLALVGSG 58
++ V G+GGG K+ + R P +S P P EE+VI + P R+A++ALV G
Sbjct: 90 QIQVHGIGGGHKQRYRMIDFLRFRPEHESKPGPFEEKVIAVRYDPC---RSADIALVAGG 146
Query: 59 DFLKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAH 118
+ + I+ATENMKAGD + S I R+ V A+EGDA+P+GALP+G+++ VE PG GA
Sbjct: 147 NRKRWIIATENMKAGDTVLNSDHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQ 206
Query: 119 YARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
Y RAAG L+R ++ ++QLPSK ++ V + C+A V +
Sbjct: 207 YIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLETCIATVGR 247
>MGI|MGI:1351622 [details] [associations]
symbol:Mrpl2 "mitochondrial ribosomal protein L2"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=ISA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR002171 InterPro:IPR022666 InterPro:IPR022669
Pfam:PF00181 Pfam:PF03947 MGI:MGI:1351622 GO:GO:0006412
GO:GO:0005762 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 eggNOG:COG0090 CTD:51069
GeneTree:ENSGT00390000000189 HOGENOM:HOG000046229
HOVERGEN:HBG057412 OMA:GNRPRSG OrthoDB:EOG4H19WF HSSP:P04257
EMBL:AK009521 EMBL:BC027762 IPI:IPI00109740 RefSeq:NP_079578.1
UniGene:Mm.391007 ProteinModelPortal:Q9D773 SMR:Q9D773
STRING:Q9D773 PhosphoSite:Q9D773 PaxDb:Q9D773 PRIDE:Q9D773
Ensembl:ENSMUST00000002844 GeneID:27398 KEGG:mmu:27398
InParanoid:Q9D773 NextBio:305380 Bgee:Q9D773 CleanEx:MM_MRPL2
Genevestigator:Q9D773 GermOnline:ENSMUSG00000002767 Uniprot:Q9D773
Length = 306
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 68/161 (42%), Positives = 101/161 (62%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDD-SP-PLEERVIQIIPSPAPTVRTANLALVGSG 58
R+ V G+GGG K++ + R P + +P P EE+V+ + P R+A++ALV G
Sbjct: 90 RIRVHGIGGGHKQNYRMIDFLRFRPEKEKAPEPFEEKVVVVRYDPC---RSADIALVAGG 146
Query: 59 DFLKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAH 118
+ I+ATENMKAGD + S I R+ V A+EGDA+P+GALP+G+++ VE PG GA
Sbjct: 147 SRKRWIIATENMKAGDTILNSNHIGRMAVAAQEGDAHPLGALPVGTLINNVESEPGRGAQ 206
Query: 119 YARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
Y RAAG L+R ++ ++QLPSK ++ V + C A V +
Sbjct: 207 YIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLESCTATVGR 247
>UNIPROTKB|F1NY85 [details] [associations]
symbol:MRPL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 GO:GO:0005739
GO:GO:0006412 GO:GO:0016740 GO:GO:0003723 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 TIGRFAMs:TIGR01171 OMA:LVRQECM
GeneTree:ENSGT00390000000189 EMBL:AADN02044222 IPI:IPI00579337
Ensembl:ENSGALT00000013999 Uniprot:F1NY85
Length = 259
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 67/159 (42%), Positives = 101/159 (63%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V G+GGG K + DF+R ++ E+VI + P R+A++ALV G+
Sbjct: 49 RIRVRGIGGGHKRRYRMI-DFQRLRYNEGT---EKVIAVRYDPC---RSADIALVAGGNQ 101
Query: 61 LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYA 120
+ I+ATENM+ GD++K S I R+ V A EGDAYP+GALP+G+++C +E PG+GA Y
Sbjct: 102 KRWIIATENMQPGDLIKNSSHIGRMAVLANEGDAYPLGALPVGTLICNLESHPGKGAQYI 161
Query: 121 RAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
RAAG L+R ++ ++QLPSK + V + C+A V +
Sbjct: 162 RAAGTCGVLLRKVNGTAIVQLPSKRHMQVLETCVATVGR 200
>RGD|1307147 [details] [associations]
symbol:Mrpl2 "mitochondrial ribosomal protein L2" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 RGD:1307147
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 eggNOG:COG0090 CTD:51069 HOGENOM:HOG000046229
HOVERGEN:HBG057412 OrthoDB:EOG4H19WF EMBL:BC100081 IPI:IPI00190153
RefSeq:NP_001029308.1 UniGene:Rn.102111 ProteinModelPortal:Q498T4
STRING:Q498T4 PRIDE:Q498T4 GeneID:301240 KEGG:rno:301240
UCSC:RGD:1307147 NextBio:648365 ArrayExpress:Q498T4
Genevestigator:Q498T4 GermOnline:ENSRNOG00000018057 Uniprot:Q498T4
Length = 304
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 68/161 (42%), Positives = 100/161 (62%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDS-P-PLEERVIQIIPSPAPTVRTANLALVGSG 58
R+ V G+GGG K++ + R P + P P EE+V+ + P R+A++ALV G
Sbjct: 88 RIRVHGIGGGHKQNYRMIDFLRFRPEKGTEPEPFEEKVVVVRYDPC---RSADIALVAGG 144
Query: 59 DFLKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAH 118
+ I+ATENMKAGD + S I R+ V A+EGDA+P+GALP+G+++ VE PG GA
Sbjct: 145 SRKRWIIATENMKAGDTILNSNHIGRMAVAAQEGDAHPLGALPVGTLINNVESEPGRGAQ 204
Query: 119 YARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
Y RAAG L+R ++ ++QLPSK ++ V + C A V +
Sbjct: 205 YIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLESCTATVGR 245
>UNIPROTKB|Q498T4 [details] [associations]
symbol:Mrpl2 "39S ribosomal protein L2, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 RGD:1307147
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 eggNOG:COG0090 CTD:51069 HOGENOM:HOG000046229
HOVERGEN:HBG057412 OrthoDB:EOG4H19WF EMBL:BC100081 IPI:IPI00190153
RefSeq:NP_001029308.1 UniGene:Rn.102111 ProteinModelPortal:Q498T4
STRING:Q498T4 PRIDE:Q498T4 GeneID:301240 KEGG:rno:301240
UCSC:RGD:1307147 NextBio:648365 ArrayExpress:Q498T4
Genevestigator:Q498T4 GermOnline:ENSRNOG00000018057 Uniprot:Q498T4
Length = 304
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 68/161 (42%), Positives = 100/161 (62%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDS-P-PLEERVIQIIPSPAPTVRTANLALVGSG 58
R+ V G+GGG K++ + R P + P P EE+V+ + P R+A++ALV G
Sbjct: 88 RIRVHGIGGGHKQNYRMIDFLRFRPEKGTEPEPFEEKVVVVRYDPC---RSADIALVAGG 144
Query: 59 DFLKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAH 118
+ I+ATENMKAGD + S I R+ V A+EGDA+P+GALP+G+++ VE PG GA
Sbjct: 145 SRKRWIIATENMKAGDTILNSNHIGRMAVAAQEGDAHPLGALPVGTLINNVESEPGRGAQ 204
Query: 119 YARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
Y RAAG L+R ++ ++QLPSK ++ V + C A V +
Sbjct: 205 YIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLESCTATVGR 245
>WB|WBGene00018932 [details] [associations]
symbol:mrpl-2 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040015
"negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040039 "inductive
cell migration" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0032940
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0040039
GO:GO:0040015 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 PANTHER:PTHR13691 eggNOG:COG0090
GeneTree:ENSGT00390000000189 HOGENOM:HOG000046229 OMA:GNRPRSG
HSSP:P04257 EMBL:FO081484 PIR:A88633 RefSeq:NP_499987.2
ProteinModelPortal:O45110 SMR:O45110 STRING:O45110 PaxDb:O45110
EnsemblMetazoa:F56B3.8 GeneID:176903 KEGG:cel:CELE_F56B3.8
UCSC:F56B3.8 CTD:176903 WormBase:F56B3.8 InParanoid:O45110
NextBio:894522 Uniprot:O45110
Length = 321
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 63/160 (39%), Positives = 96/160 (60%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R V +GGG+K D + RRGP D +ER+++I P RT ++AL +
Sbjct: 72 RKVNQHIGGGVKFDYFMIDFHRRGPADQGATYDERILEIRRDPN---RTCHIALCAGING 128
Query: 61 LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPG-EGAHY 119
+ ILATENMKAGD++ TS + PV EG+AYP+G+L G+++ +E++P + +
Sbjct: 129 KRWILATENMKAGDVISTSGHLSENPVIGVEGNAYPIGSLAAGTVINSIERYPTMDSETF 188
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
+AAG S T+VR D V++LP KHE ++ + CMA V +
Sbjct: 189 VKAAGTSATIVRHQGDFTVVKLPHKHEFSLHRTCMATVGR 228
>UNIPROTKB|C9IY40 [details] [associations]
symbol:MRPL2 "39S ribosomal protein L2, mitochondrial"
species:9606 "Homo sapiens" [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AL355385 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR13691 HOGENOM:HOG000046229 HGNC:HGNC:14056
IPI:IPI00946567 ProteinModelPortal:C9IY40 SMR:C9IY40 STRING:C9IY40
Ensembl:ENST00000230413 ArrayExpress:C9IY40 Bgee:C9IY40
Uniprot:C9IY40
Length = 225
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 58/125 (46%), Positives = 80/125 (64%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDD-SPPLEERVIQIIPSPAPTVRTANLALVGSGD 59
R+ V G+GGG K+ + R P + S P EE+VIQ+ P R+A++ALV G
Sbjct: 90 RIRVHGIGGGHKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPC---RSADIALVAGGS 146
Query: 60 FLKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ I+ATENM+AGD + S I R+ V A+EGDA+P+GALP+G+++ VE PG GA Y
Sbjct: 147 RKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQY 206
Query: 120 ARAAG 124
RAAG
Sbjct: 207 IRAAG 211
>UNIPROTKB|Q9KNY7 [details] [associations]
symbol:rplB "50S ribosomal protein L2" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0016740 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 eggNOG:COG0090 KO:K02886 OMA:STIHCIE
ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 PIR:C82059
RefSeq:NP_232221.1 ProteinModelPortal:Q9KNY7 SMR:Q9KNY7
PRIDE:Q9KNY7 DNASU:2615610 GeneID:2615610 KEGG:vch:VC2593
PATRIC:20084212 Uniprot:Q9KNY7
Length = 274
Score = 165 (63.1 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 51/144 (35%), Positives = 80/144 (55%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V +GGG K+ V DF+R T D P + ++ P+ R+AN+ALV D
Sbjct: 48 RITVRHIGGGHKQHYRLV-DFKR--TKDGIPAKVERLEYDPN-----RSANIALVLYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ I+A + ++AGD++++ P P++A G+A P+ +P+GS + VE PG+GA
Sbjct: 100 ERRYIIAPKGLQAGDVIQSG---PDAPIKA--GNAMPMRNIPVGSTIHNVELTPGKGAQL 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPS 143
AR+AG LV V L+L S
Sbjct: 155 ARSAGAYAQLVARDGAYVTLRLRS 178
>TIGR_CMR|CHY_2306 [details] [associations]
symbol:CHY_2306 "ribosomal protein L2" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0016740
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
RefSeq:YP_361115.1 ProteinModelPortal:Q3A9R9 SMR:Q3A9R9
STRING:Q3A9R9 GeneID:3726958 KEGG:chy:CHY_2306 PATRIC:21277683
BioCyc:CHYD246194:GJCN-2305-MONOMER Uniprot:Q3A9R9
Length = 274
Score = 165 (63.1 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 51/160 (31%), Positives = 80/160 (50%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V GGG K ++ + DF+R D P + I+ P+ RTA +AL+ D
Sbjct: 48 RLTVRHRGGGHKR-MYRIIDFKRNK--DGIPAKVVAIEYDPN-----RTARIALLAYADG 99
Query: 61 LK-LILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
K I+A +K GD+L + P + K G+A P+ +P+G++V +E +PG+G
Sbjct: 100 EKRYIIAPHGLKVGDVLMSG---PDADI--KVGNALPLANIPVGTLVHNIELYPGKGGQL 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
RAAG + L+ +L+LPS V C A + Q
Sbjct: 155 VRAAGTAAQLLGKEGRYAILRLPSGEMRKVLLECRATIGQ 194
>TIGR_CMR|VC_2593 [details] [associations]
symbol:VC_2593 "ribosomal protein L2" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 eggNOG:COG0090 KO:K02886 OMA:STIHCIE
ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 PIR:C82059
RefSeq:NP_232221.1 ProteinModelPortal:Q9KNY7 SMR:Q9KNY7
PRIDE:Q9KNY7 DNASU:2615610 GeneID:2615610 KEGG:vch:VC2593
PATRIC:20084212 Uniprot:Q9KNY7
Length = 274
Score = 165 (63.1 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 51/144 (35%), Positives = 80/144 (55%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V +GGG K+ V DF+R T D P + ++ P+ R+AN+ALV D
Sbjct: 48 RITVRHIGGGHKQHYRLV-DFKR--TKDGIPAKVERLEYDPN-----RSANIALVLYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ I+A + ++AGD++++ P P++A G+A P+ +P+GS + VE PG+GA
Sbjct: 100 ERRYIIAPKGLQAGDVIQSG---PDAPIKA--GNAMPMRNIPVGSTIHNVELTPGKGAQL 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPS 143
AR+AG LV V L+L S
Sbjct: 155 ARSAGAYAQLVARDGAYVTLRLRS 178
>TIGR_CMR|CPS_0870 [details] [associations]
symbol:CPS_0870 "ribosomal protein L2" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
RefSeq:YP_267619.1 ProteinModelPortal:Q487Z6 SMR:Q487Z6
STRING:Q487Z6 PRIDE:Q487Z6 GeneID:3519963 KEGG:cps:CPS_0870
PATRIC:21465033 BioCyc:CPSY167879:GI48-956-MONOMER Uniprot:Q487Z6
Length = 274
Score = 164 (62.8 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 53/160 (33%), Positives = 81/160 (50%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V +GGG K+ V DF+R D P ER ++ P+ R+AN+ALV D
Sbjct: 48 RITVRHIGGGHKQHYRIV-DFKR-LKDGIPAKVER-LEYDPN-----RSANIALVLYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ ILA + + AGD + + + P K G+ P+ +P+GS++ +E PG+GA
Sbjct: 100 ERRYILAPKGLSAGDSILSGVGAP-----IKPGNTMPLRNIPLGSVIHAIELKPGKGAQI 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
ARAAG LV V L+L S ++ C A + +
Sbjct: 155 ARAAGTYAQLVAKDGAYVTLRLRSGEMRKIESDCRATLGE 194
>TIGR_CMR|SO_0234 [details] [associations]
symbol:SO_0234 "ribosomal protein L2" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
RefSeq:NP_715874.1 ProteinModelPortal:Q8EK65 SMR:Q8EK65
GeneID:1168117 KEGG:son:SO_0234 PATRIC:23520161 Uniprot:Q8EK65
Length = 274
Score = 155 (59.6 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 53/160 (33%), Positives = 80/160 (50%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V +GGG K+ + DF+R D P ER ++ P+ RTA++ALV D
Sbjct: 48 RITVRHVGGGHKQHYRLI-DFKRDK-DGIPAKIER-LEYDPN-----RTAHIALVLYADG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ ILA + M+AGD +++ + K G+A P+ +P+GS+V VE PG+GA
Sbjct: 100 ERRYILAAKGMQAGDKIQSG-----VEAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQI 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG +V L+L S V C A +
Sbjct: 155 ARSAGAYVQVVARDGAYATLRLRSGEMRKVPVDCRATFGE 194
>TIGR_CMR|DET_0477 [details] [associations]
symbol:DET_0477 "ribosomal protein L2" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740 GO:GO:0003735
EMBL:CP000027 GenomeReviews:CP000027_GR Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 OMA:STIHCIE
ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 RefSeq:YP_181221.1
ProteinModelPortal:Q3Z978 SMR:Q3Z978 STRING:Q3Z978 GeneID:3230152
KEGG:det:DET0477 PATRIC:21608023 BioCyc:DETH243164:GJNF-477-MONOMER
Uniprot:Q3Z978
Length = 274
Score = 154 (59.3 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 53/160 (33%), Positives = 73/160 (45%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
RV V GGG K I V DF+R D + R+ I P RTA +ALV D
Sbjct: 48 RVTVRHRGGGSKTQIR-VIDFKRNKLD----VPGRIAAIEYDPN---RTARIALVFYTDG 99
Query: 61 LK-LILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
K ILA ++K GD++ K G+A P+ A+P G+ + +E G G
Sbjct: 100 EKRYILAPSDLKIGDVIMAGE-----NAEPKSGNALPLSAIPTGTFIHNIELIKGRGGIM 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
R+AG + L+ D +++LPS V C A V Q
Sbjct: 155 VRSAGAAAQLMAKEGDYALVRLPSGEMRKVRSDCSATVGQ 194
>UNIPROTKB|P60422 [details] [associations]
symbol:rplB species:83333 "Escherichia coli K-12"
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0015934 "large ribosomal
subunit" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 GO:GO:0016740 GO:GO:0008270
EMBL:U18997 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 PDB:2VHM PDBsum:2VHM PDB:2RDO PDBsum:2RDO
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12 PDB:3J14 PDB:3SGF
PDB:3UOS PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11
PDBsum:3J12 PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS PDB:1P85 PDB:1P86
PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4 PDB:2AWB PDB:2GYA PDB:2GYC
PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM PDB:2QAO PDB:2QBA PDB:2QBC
PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK PDB:2QOV PDB:2QOX PDB:2QOZ
PDB:2QP1 PDB:2VHN PDB:2WWQ PDB:2Z4L PDB:2Z4N PDB:3DF2 PDB:3DF4
PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P PDB:3I1R PDB:3I1T
PDB:3I20 PDB:3I22 PDB:3IZT PDB:3IZU PDB:3J01 PDB:3J19 PDB:3KCR
PDB:3OAS PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ PDB:3OFR PDB:3OFZ
PDB:3OG0 PDB:3ORB PDB:3R8S PDB:3R8T PDB:487D PDB:4GAR PDB:4GAU
PDBsum:1P85 PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8 PDBsum:1VT2
PDBsum:2AW4 PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC PDBsum:2I2T
PDBsum:2I2V PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO PDBsum:2QBA
PDBsum:2QBC PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI PDBsum:2QBK
PDBsum:2QOV PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1 PDBsum:2VHN
PDBsum:2WWQ PDBsum:2Z4L PDBsum:2Z4N PDBsum:3DF2 PDBsum:3DF4
PDBsum:3E1B PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N PDBsum:3I1P
PDBsum:3I1R PDBsum:3I1T PDBsum:3I20 PDBsum:3I22 PDBsum:3IZT
PDBsum:3IZU PDBsum:3J01 PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS
PDBsum:3OAT PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR
PDBsum:3OFZ PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T
PDBsum:487D PDBsum:4GAR PDBsum:4GAU PDB:3BBX PDBsum:3BBX
EMBL:X02613 OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
PIR:E23129 RefSeq:NP_417776.1 RefSeq:YP_492115.1
ProteinModelPortal:P60422 SMR:P60422 DIP:DIP-35747N IntAct:P60422
MINT:MINT-1322809 PaxDb:P60422 PRIDE:P60422
EnsemblBacteria:EBESCT00000003048 EnsemblBacteria:EBESCT00000015239
GeneID:12932295 GeneID:947820 KEGG:ecj:Y75_p3859 KEGG:eco:b3317
PATRIC:32122066 EchoBASE:EB0858 EcoGene:EG10865
BioCyc:EcoCyc:EG10865-MONOMER BioCyc:ECOL316407:JW3279-MONOMER
EvolutionaryTrace:P60422 Genevestigator:P60422 Uniprot:P60422
Length = 273
Score = 152 (58.6 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 52/160 (32%), Positives = 80/160 (50%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ +GGG K+ V DF+R D P + ER ++ P+ R+AN+ALV D
Sbjct: 48 RITTRHIGGGHKQAYRIV-DFKRNK-DGIPAVVER-LEYDPN-----RSANIALVLYKDG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ ILA + +KAGD +++ + K G+ P+ +P+GS V VE PG+G
Sbjct: 100 ERRYILAPKGLKAGDQIQSG-----VDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQL 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG +V V L+L S V+ C A + +
Sbjct: 155 ARSAGTYVQIVARDGAYVTLRLRSGEMRKVEADCRATLGE 194
>UNIPROTKB|Q9L0D7 [details] [associations]
symbol:rplB "50S ribosomal protein L2" species:100226
"Streptomyces coelicolor A3(2)" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
GO:GO:0003735 EMBL:AL939121 GenomeReviews:AL645882_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
RefSeq:NP_628864.1 ProteinModelPortal:Q9L0D7 SMR:Q9L0D7
PhosSite:P11111097 GeneID:1100146 KEGG:sco:SCO4705 PATRIC:23739232
Uniprot:Q9L0D7
Length = 278
Score = 152 (58.6 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 54/160 (33%), Positives = 77/160 (48%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
RV V GGG K + V DFRR D P +V I P RTA +AL+ D
Sbjct: 48 RVTVRHQGGGHKR-AYRVIDFRRHDKDGVPA---KVAHIEYDPN---RTARIALLHYADG 100
Query: 61 LK-LILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
K ILA N++ GD ++ P + K G+ + +P+G+ + +E PG GA +
Sbjct: 101 EKRYILAPRNLQQGDRVENG---PGADI--KPGNNLALRNIPVGTTIHAIELRPGGGAKF 155
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG S L+ L++PS VD+ C A V +
Sbjct: 156 ARSAGASVQLLAKEGTMAHLRMPSGEIRLVDQRCRATVGE 195
>UNIPROTKB|P95052 [details] [associations]
symbol:rplB "50S ribosomal protein L2" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 GO:GO:0005886 GO:GO:0040007 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006412
GO:GO:0016740 EMBL:BX842574 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 OMA:STIHCIE
ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 PIR:C70642
RefSeq:NP_215218.1 RefSeq:NP_335148.1 RefSeq:YP_006514048.1
ProteinModelPortal:P95052 SMR:P95052 PRIDE:P95052
EnsemblBacteria:EBMYCT00000002534 EnsemblBacteria:EBMYCT00000069561
GeneID:13318593 GeneID:888341 GeneID:926021 KEGG:mtc:MT0731
KEGG:mtu:Rv0704 KEGG:mtv:RVBD_0704 PATRIC:18123339
TubercuList:Rv0704 Uniprot:P95052
Length = 280
Score = 141 (54.7 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 47/159 (29%), Positives = 73/159 (45%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ GGG K + DFRR +D + +V I P T R A L + G+
Sbjct: 48 RITTRHKGGGHKRAYRMI-DFRR---NDKDGVNAKVAHIEYDPNRTARIALLHYL-DGE- 101
Query: 61 LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYA 120
+ I+A + GD++++ K G+ P+ +P G+++ VE PG GA A
Sbjct: 102 KRYIIAPNGLSQGDVVESGA-----NADIKPGNNLPLRNIPAGTLIHAVELRPGGGAKLA 156
Query: 121 RAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
R+AG+S L+ L++PS VD C A V +
Sbjct: 157 RSAGSSIQLLGKEASYASLRMPSGEIRRVDVRCRATVGE 195
>TIGR_CMR|GSU_2854 [details] [associations]
symbol:GSU_2854 "ribosomal protein L2" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 OMA:STIHCIE
ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 RefSeq:NP_953897.1
ProteinModelPortal:P60401 SMR:P60401 GeneID:2685862
KEGG:gsu:GSU2854 PATRIC:22028555
BioCyc:GSUL243231:GH27-2828-MONOMER Uniprot:P60401
Length = 274
Score = 140 (54.3 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 49/160 (30%), Positives = 76/160 (47%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ +GGG K+ + DFRR + P + I+ P+ R+A +AL+ D
Sbjct: 48 RITARHIGGGHKKKYRII-DFRRNKVE--VPAKVASIEYDPN-----RSARIALLHYADG 99
Query: 61 LK-LILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
K ILA ++K GD + S K G+A P+ A+P+G+I+ +E G+G
Sbjct: 100 AKRYILAPLDLKVGDSIVASS-----NADIKPGNALPLRAIPLGTIIHNIELKIGKGGQL 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG L+ ++LPS V CMA + Q
Sbjct: 155 ARSAGTFAQLMAKEGKYAQVKLPSGEVRMVLLDCMATIGQ 194
>UNIPROTKB|Q9AMK8 [details] [associations]
symbol:rplB "50S ribosomal protein L2" species:42684
"Streptomyces collinus" [GO:0003735 "structural constituent of
ribosome" evidence=IDA] [GO:0006412 "translation" evidence=IDA]
[GO:0015934 "large ribosomal subunit" evidence=IDA]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 PANTHER:PTHR13691:SF5 EMBL:AF324467
ProteinModelPortal:Q9AMK8 SMR:Q9AMK8 Uniprot:Q9AMK8
Length = 278
Score = 135 (52.6 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 50/160 (31%), Positives = 75/160 (46%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V GGG K V DFRR D P +V I P R+A +AL+ D
Sbjct: 48 RITVRHQGGGHKRAYRIV-DFRRHDKDGVPA---KVAHIEYDPN---RSARIALLHYADG 100
Query: 61 LK-LILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
K ILA N++ GD ++ P + K G+ + +P+G+ + +E PG GA +
Sbjct: 101 EKRYILAPRNLQQGDRVENG---PGADI--KPGNNLALRNIPVGTTIHAIELRPGGGAKF 155
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
AR+AG S L+ L++PS V+ C A + +
Sbjct: 156 ARSAGASVQLLAKEGAYAHLRMPSGEIRLVNVRCRATIGE 195
>TIGR_CMR|SPO_0484 [details] [associations]
symbol:SPO_0484 "ribosomal protein L2" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006412 GO:GO:0016740 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 ProtClustDB:PRK09374
PANTHER:PTHR13691:SF5 OMA:LVRQECM RefSeq:YP_165746.1
ProteinModelPortal:Q5LW59 SMR:Q5LW59 GeneID:3195307
KEGG:sil:SPO0484 PATRIC:23374229 Uniprot:Q5LW59
Length = 280
Score = 132 (51.5 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 49/158 (31%), Positives = 73/158 (46%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ GGG K ++ + DF+R D + +E I+ P+ RTA +AL+ D
Sbjct: 48 RITSRRRGGGAKR-LYRIVDFKRNKFDVAATVER--IEYDPN-----RTAFIALIKYEDG 99
Query: 61 LKL-ILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ ILA + + GD + S K G+A P +P+G+IV +E PG+G
Sbjct: 100 EQAYILAPQRLAVGDKVVASA-----KADIKPGNAMPFSGMPIGTIVHNIEMKPGKGGQI 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVV 157
ARAAG V ++L S V + CMA V
Sbjct: 155 ARAAGTYAQFVGRDGGYAQIRLSSGELRMVRQECMATV 192
>GENEDB_PFALCIPARUM|PF11_0337 [details] [associations]
symbol:PF11_0337 "50S ribosomal protein L2,
putative" species:5833 "Plasmodium falciparum" [GO:0000315
"organellar large ribosomal subunit" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 GO:GO:0005739 GO:GO:0006412 GO:GO:0016740
GO:GO:0003723 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014186 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0020011 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 PANTHER:PTHR13691:SF5
HSSP:P04257 RefSeq:XP_001348008.1 ProteinModelPortal:Q8II37
SMR:Q8II37 EnsemblProtists:PF11_0337:mRNA GeneID:810884
KEGG:pfa:PF11_0337 EuPathDB:PlasmoDB:PF3D7_1132700 OMA:NEYATIK
ProtClustDB:PTZ00031 Uniprot:Q8II37
Length = 333
Score = 133 (51.9 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 44/160 (27%), Positives = 77/160 (48%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGD- 59
++ V GGG + + ++ DF+R D + V++I P+ R+A++AL+ D
Sbjct: 96 KITVRHRGGGHAQRLRFI-DFKRSRKD----IYSTVLRIEYDPS---RSAHIALIQYEDG 147
Query: 60 FLKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
L ILA ++ GD + S + P G++ P+ +P+GSI+ +E PG G
Sbjct: 148 VLSYILAPLLLRPGDKIIASKYANINP-----GNSLPLQNIPVGSIIHNIEMRPGAGGQL 202
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
RAAG T++ ++ ++L S C A + Q
Sbjct: 203 IRAAGTYATIISKDNEYATIKLKSTEIRKFPLQCWATIGQ 242
>UNIPROTKB|Q8II37 [details] [associations]
symbol:PF11_0337 "Mitochondrial ribosomal protein L2"
species:36329 "Plasmodium falciparum 3D7" [GO:0005739
"mitochondrion" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 GO:GO:0005739 GO:GO:0006412 GO:GO:0016740
GO:GO:0003723 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014186 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0020011 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 PANTHER:PTHR13691:SF5
HSSP:P04257 RefSeq:XP_001348008.1 ProteinModelPortal:Q8II37
SMR:Q8II37 EnsemblProtists:PF11_0337:mRNA GeneID:810884
KEGG:pfa:PF11_0337 EuPathDB:PlasmoDB:PF3D7_1132700 OMA:NEYATIK
ProtClustDB:PTZ00031 Uniprot:Q8II37
Length = 333
Score = 133 (51.9 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 44/160 (27%), Positives = 77/160 (48%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGD- 59
++ V GGG + + ++ DF+R D + V++I P+ R+A++AL+ D
Sbjct: 96 KITVRHRGGGHAQRLRFI-DFKRSRKD----IYSTVLRIEYDPS---RSAHIALIQYEDG 147
Query: 60 FLKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
L ILA ++ GD + S + P G++ P+ +P+GSI+ +E PG G
Sbjct: 148 VLSYILAPLLLRPGDKIIASKYANINP-----GNSLPLQNIPVGSIIHNIEMRPGAGGQL 202
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
RAAG T++ ++ ++L S C A + Q
Sbjct: 203 IRAAGTYATIISKDNEYATIKLKSTEIRKFPLQCWATIGQ 242
>UNIPROTKB|P0C495 [details] [associations]
symbol:rpl2-A "50S ribosomal protein L2, chloroplastic"
species:4530 "Oryza sativa" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0009507 GO:GO:0009536
GO:GO:0016020 GO:GO:0006412 GO:GO:0016740 GO:GO:0003723
EMBL:AY522331 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 ProteinModelPortal:P0C495 SMR:P0C495
PRIDE:P0C495 Gramene:P0C495 HOGENOM:HOG000232982
Genevestigator:P0C495 Uniprot:P0C495
Length = 273
Score = 129 (50.5 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 46/153 (30%), Positives = 70/153 (45%)
Query: 8 GGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDFLK-LILA 66
GGG K ++ DFRR D + R++ I P R A + L+ GD K IL
Sbjct: 53 GGGHKR-LYRKIDFRRNQKD----ISGRIVTIEYDPN---RNAYICLIHYGDGEKGYILH 104
Query: 67 TENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGNS 126
GD + + ++P+ G+A P+ +P+G+ + +E G G ARAAG
Sbjct: 105 PRGAIIGDTIVSGT---KVPISM--GNALPLTDMPLGTAIHNIEITRGRGGQLARAAGAV 159
Query: 127 CTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
L+ L+LPS V ++C+A V Q
Sbjct: 160 AKLIAKEGKSATLRLPSGEVRLVSQNCLATVGQ 192
>UNIPROTKB|P0C496 [details] [associations]
symbol:rpl2-A "50S ribosomal protein L2, chloroplastic"
species:39946 "Oryza sativa Indica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0009507 GO:GO:0009536 GO:GO:0016020 GO:GO:0006412
GO:GO:0016740 GO:GO:0003723 EMBL:AY522329 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
RefSeq:YP_654244.1 RefSeq:YP_654261.1 ProteinModelPortal:P0C496
SMR:P0C496 PRIDE:P0C496 GeneID:4126865 GeneID:4126903
Gramene:P0C496 ProtClustDB:CLSC858538 Uniprot:P0C496
Length = 273
Score = 129 (50.5 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 46/153 (30%), Positives = 70/153 (45%)
Query: 8 GGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDFLK-LILA 66
GGG K ++ DFRR D + R++ I P R A + L+ GD K IL
Sbjct: 53 GGGHKR-LYRKIDFRRNQKD----ISGRIVTIEYDPN---RNAYICLIHYGDGEKGYILH 104
Query: 67 TENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGNS 126
GD + + ++P+ G+A P+ +P+G+ + +E G G ARAAG
Sbjct: 105 PRGAIIGDTIVSGT---KVPISM--GNALPLTDMPLGTAIHNIEITRGRGGQLARAAGAV 159
Query: 127 CTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
L+ L+LPS V ++C+A V Q
Sbjct: 160 AKLIAKEGKSATLRLPSGEVRLVSQNCLATVGQ 192
>UNIPROTKB|P0C497 [details] [associations]
symbol:rpl2-A "50S ribosomal protein L2, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0009507 GO:GO:0009536 GO:GO:0016020 GO:GO:0006412
GO:GO:0016740 GO:GO:0003723 EMBL:X15901 EMBL:AY522330
GenomeReviews:AY522330_GR GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 EMBL:M22826
EMBL:L40578 ProtClustDB:CHL00052 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 PIR:JQ0270 RefSeq:NP_039427.2 RefSeq:NP_039463.2
ProteinModelPortal:P0C497 SMR:P0C497 STRING:P0C497 GeneID:3131421
GeneID:3131424 KEGG:osa:3131421 KEGG:osa:3131424 Gramene:P0C497
eggNOG:COG0090 KO:K02886 Uniprot:P0C497
Length = 273
Score = 129 (50.5 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 46/153 (30%), Positives = 70/153 (45%)
Query: 8 GGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDFLK-LILA 66
GGG K ++ DFRR D + R++ I P R A + L+ GD K IL
Sbjct: 53 GGGHKR-LYRKIDFRRNQKD----ISGRIVTIEYDPN---RNAYICLIHYGDGEKGYILH 104
Query: 67 TENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGNS 126
GD + + ++P+ G+A P+ +P+G+ + +E G G ARAAG
Sbjct: 105 PRGAIIGDTIVSGT---KVPISM--GNALPLTDMPLGTAIHNIEITRGRGGQLARAAGAV 159
Query: 127 CTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
L+ L+LPS V ++C+A V Q
Sbjct: 160 AKLIAKEGKSATLRLPSGEVRLVSQNCLATVGQ 192
>UNIPROTKB|Q6EN83 [details] [associations]
symbol:rpl2-A "50S ribosomal protein L2, chloroplastic"
species:4536 "Oryza nivara" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0009507 GO:GO:0009536
GO:GO:0006412 GO:GO:0016740 GO:GO:0003723 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AP006728
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 RefSeq:YP_052793.1
RefSeq:YP_052839.1 ProteinModelPortal:Q6EN83 SMR:Q6EN83
GeneID:2885923 GeneID:2885924 Gramene:Q6EN83 ProtClustDB:CHL00052
Gene3D:4.10.950.10 HAMAP:MF_01320_B InterPro:IPR014726
PANTHER:PTHR13691 TIGRFAMs:TIGR01171 Uniprot:Q6EN83
Length = 273
Score = 129 (50.5 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 46/153 (30%), Positives = 70/153 (45%)
Query: 8 GGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDFLK-LILA 66
GGG K ++ DFRR D + R++ I P R A + L+ GD K IL
Sbjct: 53 GGGHKR-LYRKIDFRRNQKD----ISGRIVTIEYDPN---RNAYICLIHYGDGEKGYILH 104
Query: 67 TENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGNS 126
GD + + ++P+ G+A P+ +P+G+ + +E G G ARAAG
Sbjct: 105 PRGAIIGDTIVSGT---KVPISM--GNALPLTDMPLGTAIHNIEITRGRGGQLARAAGAV 159
Query: 127 CTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
L+ L+LPS V ++C+A V Q
Sbjct: 160 AKLIAKEGKSATLRLPSGEVRLVSQNCLATVGQ 192
>UNIPROTKB|K7GRF2 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR13691 GeneTree:ENSGT00390000009907 EMBL:CU468612
Ensembl:ENSSSCT00000034872 Uniprot:K7GRF2
Length = 176
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 43/129 (33%), Positives = 62/129 (48%)
Query: 36 VIQIIPSPAPTVRTANLALVGSGDFLKLILATENMKAGDILKTSMFIP-RIPVRAKEGDA 94
V II P R A LA V D + TE A + + T F+ + G+
Sbjct: 45 VKDIIHDPG---RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNV 101
Query: 95 YPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLV----RTLHDRVVLQLPSKHEVA-V 149
PVG +P G+IVCC+E+ PG+ ARA+GN T++ T RV L SK ++
Sbjct: 102 LPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSA 161
Query: 150 DKHCMAVVA 158
++ + VVA
Sbjct: 162 NRAVVGVVA 170
>UNIPROTKB|E9PKZ0 [details] [associations]
symbol:RPL8 "60S ribosomal protein L8" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 ChiTaRS:RPL8 HGNC:HGNC:10368
EMBL:AF235103 IPI:IPI00976899 SMR:E9PKZ0 Ensembl:ENST00000528957
Ensembl:ENST00000532702 Uniprot:E9PKZ0
Length = 205
Score = 123 (48.4 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 43/129 (33%), Positives = 62/129 (48%)
Query: 36 VIQIIPSPAPTVRTANLALVGSGDFLKLILATENMKAGDILKTSMFIP-RIPVRAKEGDA 94
V II P R A LA V D + TE A + + T F+ + G+
Sbjct: 45 VKDIIHDPG---RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNV 101
Query: 95 YPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLV----RTLHDRVVLQLPSKHEVA-V 149
PVG +P G+IVCC+E+ PG+ ARA+GN T++ T RV L SK ++
Sbjct: 102 LPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSA 161
Query: 150 DKHCMAVVA 158
++ + VVA
Sbjct: 162 NRAVVGVVA 170
>RGD|1561333 [details] [associations]
symbol:RGD1561333 "similar to 60S ribosomal protein L8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 RGD:1561333
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 OMA:DNDTSRI OrthoDB:EOG4XKV7P
HAMAP:MF_01320_A IPI:IPI00368250 RefSeq:XP_001061778.1
RefSeq:XP_574690.1 Ensembl:ENSRNOT00000048691 GeneID:499374
KEGG:rno:499374 UCSC:RGD:1561333 CTD:499374 NextBio:702710
Uniprot:D4A6W6
Length = 257
Score = 126 (49.4 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 43/129 (33%), Positives = 63/129 (48%)
Query: 36 VIQIIPSPAPTVRTANLALVGSGDFLKLILATENMKAGDILKTSMFIP-RIPVRAKEGDA 94
V II P R+A LA V D + TE A + + T F+ + G+
Sbjct: 45 VKDIIHDPG---RSAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNV 101
Query: 95 YPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLV----RTLHDRVVLQLPSKHEVA-V 149
PVG +P G+IVCC+E+ PG+ ARA+GN T++ T RV L SK ++
Sbjct: 102 LPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSA 161
Query: 150 DKHCMAVVA 158
++ + VVA
Sbjct: 162 NRAVVGVVA 170
>UNIPROTKB|G3V1A1 [details] [associations]
symbol:RPL8 "Ribosomal protein L8, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH471162 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR13691 ChiTaRS:RPL8 UniGene:Hs.178551 HGNC:HGNC:10368
EMBL:AF235103 ProteinModelPortal:G3V1A1 SMR:G3V1A1 PRIDE:G3V1A1
Ensembl:ENST00000529920 ArrayExpress:G3V1A1 Bgee:G3V1A1
Uniprot:G3V1A1
Length = 167
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 43/127 (33%), Positives = 60/127 (47%)
Query: 36 VIQIIPSPAPTVRTANLALVGSGDFLKLILATENMKAGDILKTSMFIP-RIPVRAKEGDA 94
V II P R A LA V D + TE A + + T F+ + G+
Sbjct: 45 VKDIIHDPG---RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNV 101
Query: 95 YPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLV----RTLHDRVVLQLPSKHEVAVD 150
PVG +P G+IVCC+E+ PG+ ARA+GN T++ T RV +LPS + +
Sbjct: 102 LPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRV--KLPSGSKKVIS 159
Query: 151 KHCMAVV 157
AVV
Sbjct: 160 SANRAVV 166
>TIGR_CMR|BA_0113 [details] [associations]
symbol:BA_0113 "ribosomal protein L2" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006412 GO:GO:0016740 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
RefSeq:NP_842681.1 RefSeq:YP_016718.1 RefSeq:YP_026399.1
ProteinModelPortal:Q81VS7 SMR:Q81VS7 DNASU:1087436
EnsemblBacteria:EBBACT00000013045 EnsemblBacteria:EBBACT00000017422
EnsemblBacteria:EBBACT00000020733 GeneID:1087436 GeneID:2819234
GeneID:2850447 KEGG:ban:BA_0113 KEGG:bar:GBAA_0113 KEGG:bat:BAS0113
BioCyc:BANT260799:GJAJ-124-MONOMER
BioCyc:BANT261594:GJ7F-126-MONOMER Uniprot:Q81VS7
Length = 276
Score = 126 (49.4 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 48/161 (29%), Positives = 76/161 (47%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
++ V GGG K + DF+R D P I+ P+ R+AN+AL+ D
Sbjct: 48 KITVRHQGGGHKRQYRII-DFKRNK--DGIPGRVATIEYDPN-----RSANIALINYVDG 99
Query: 61 LK-LILATENMKAG-DILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAH 118
K ILA +N++ G +I+ + K G+A P+ +P+G++V +E PG G
Sbjct: 100 EKRYILAPKNLEVGMEIMSGA------EADIKIGNALPLINIPVGTVVHNIELKPGRGGQ 153
Query: 119 YARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
R+AG S ++ V+++L S V C A V Q
Sbjct: 154 LVRSAGTSAQVLGKEGKYVLVRLTSGEVRLVLSACRATVGQ 194
>ZFIN|ZDB-GENE-040426-1670 [details] [associations]
symbol:rpl8 "ribosomal protein L8" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
InterPro:IPR023672 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 ZFIN:ZDB-GENE-040426-1670 GO:GO:0006412
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 KO:K02938 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 eggNOG:COG0090
GeneTree:ENSGT00390000009907 HOGENOM:HOG000232983 OMA:GRVIRNQ
CTD:6132 HOVERGEN:HBG079431 OrthoDB:EOG4XKV7P EMBL:BC059473
EMBL:BC065432 IPI:IPI00505170 RefSeq:NP_957007.1 UniGene:Dr.4091
ProteinModelPortal:Q6P0V6 SMR:Q6P0V6 STRING:Q6P0V6 PRIDE:Q6P0V6
Ensembl:ENSDART00000006948 Ensembl:ENSDART00000140039 GeneID:393686
KEGG:dre:393686 InParanoid:Q6P0V6 NextBio:20814689
ArrayExpress:Q6P0V6 Bgee:Q6P0V6 Uniprot:Q6P0V6
Length = 257
Score = 125 (49.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 44/129 (34%), Positives = 62/129 (48%)
Query: 36 VIQIIPSPAPTVRTANLALVGSGDFLKLILATENMKAGDILKTSMFIP-RIPVRAKEGDA 94
V II P R A LA V D + TE A + + T FI + G+
Sbjct: 45 VKDIIHDPG---RGAPLAKVMFRDPYRFKKRTELFIAAEGIHTGQFIYCGKKAQLNIGNV 101
Query: 95 YPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLV----RTLHDRVVLQLPSKHEVA-V 149
PVG +P G+IVCC+E+ PG+ ARA+GN T++ T RV L SK ++
Sbjct: 102 LPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKSRVKLPSGSKKVISSA 161
Query: 150 DKHCMAVVA 158
++ + VVA
Sbjct: 162 NRAVVGVVA 170
>TIGR_CMR|NSE_0269 [details] [associations]
symbol:NSE_0269 "ribosomal protein L2" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 ProtClustDB:PRK09374
PANTHER:PTHR13691:SF5 OMA:LVRQECM RefSeq:YP_506160.1 STRING:Q2GED6
PRIDE:Q2GED6 GeneID:3931693 KEGG:nse:NSE_0269 PATRIC:22680629
BioCyc:NSEN222891:GHFU-296-MONOMER Uniprot:Q2GED6
Length = 279
Score = 125 (49.1 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 48/161 (29%), Positives = 74/161 (45%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V GG K + F R + +P + V++ I P RTA +ALV DF
Sbjct: 48 RITVRHRGGRGKVRYRLI-SFSRF-SSGAPLFTKAVVERIEYD-PN-RTAFIALVR--DF 101
Query: 61 L----KLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEG 116
I+A E +K D+L T +F P G P+G +P+G+ V VE PG G
Sbjct: 102 KTGLPSYIIAPEGLKKSDVLSTDVFDDMAP-----GACMPLGKVPLGTTVHNVELKPGAG 156
Query: 117 AHYARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVV 157
R+AG+S ++ + ++ LPS + + C A +
Sbjct: 157 GQLVRSAGSSARVIARDGNYTLVTLPSGEKRLILSTCHATI 197
>UNIPROTKB|F1NIX0 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 OMA:GRVIRNQ HAMAP:MF_01320_A
EMBL:AADN02011032 IPI:IPI00590272 Ensembl:ENSGALT00000026174
Uniprot:F1NIX0
Length = 269
Score = 124 (48.7 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 42/127 (33%), Positives = 60/127 (47%)
Query: 36 VIQIIPSPAPTVRTANLALVGSGDFLKLILATENMKAGDILKTSMFIP-RIPVRAKEGDA 94
V II P R A LA + D + TE A + + T F+ + G+
Sbjct: 57 VKDIIHDPG---RGAPLAKIAFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNV 113
Query: 95 YPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLV----RTLHDRVVLQLPSKHEVAVD 150
PVG +P G+IVCC+E+ PG+ ARA+GN T++ T RV +LPS + +
Sbjct: 114 LPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRV--KLPSGSKKVIS 171
Query: 151 KHCMAVV 157
AVV
Sbjct: 172 SANRAVV 178
>UNIPROTKB|E9PKU4 [details] [associations]
symbol:RPL8 "60S ribosomal protein L8" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 ChiTaRS:RPL8 HGNC:HGNC:10368 EMBL:AF235103
IPI:IPI01015034 ProteinModelPortal:E9PKU4 SMR:E9PKU4
Ensembl:ENST00000533397 ArrayExpress:E9PKU4 Bgee:E9PKU4
Uniprot:E9PKU4
Length = 235
Score = 122 (48.0 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 36/104 (34%), Positives = 52/104 (50%)
Query: 36 VIQIIPSPAPTVRTANLALVGSGDFLKLILATENMKAGDILKTSMFIP-RIPVRAKEGDA 94
V II P R A LA V D + TE A + + T F+ + G+
Sbjct: 45 VKDIIHDPG---RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNV 101
Query: 95 YPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLVRTLHDRVV 138
PVG +P G+IVCC+E+ PG+ ARA+GN T++ + + VV
Sbjct: 102 LPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISSANRAVV 145
>UNIPROTKB|K7GNY4 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 EMBL:CU468612
Ensembl:ENSSSCT00000035638 Uniprot:K7GNY4
Length = 236
Score = 122 (48.0 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 36/104 (34%), Positives = 52/104 (50%)
Query: 36 VIQIIPSPAPTVRTANLALVGSGDFLKLILATENMKAGDILKTSMFIP-RIPVRAKEGDA 94
V II P R A LA V D + TE A + + T F+ + G+
Sbjct: 45 VKDIIHDPG---RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNV 101
Query: 95 YPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLVRTLHDRVV 138
PVG +P G+IVCC+E+ PG+ ARA+GN T++ + + VV
Sbjct: 102 LPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISSANRAVV 145
>UNIPROTKB|Q3T0S6 [details] [associations]
symbol:RPL8 "60S ribosomal protein L8" species:9913 "Bos
taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 KO:K02938
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 GeneTree:ENSGT00390000009907 HOGENOM:HOG000232983
OMA:GRVIRNQ EMBL:BC102277 EMBL:BC151407 IPI:IPI00698077
RefSeq:NP_001029797.1 UniGene:Bt.48839 ProteinModelPortal:Q3T0S6
SMR:Q3T0S6 STRING:Q3T0S6 PRIDE:Q3T0S6 Ensembl:ENSBTAT00000037367
GeneID:535056 KEGG:bta:535056 CTD:6132 HOVERGEN:HBG079431
InParanoid:Q3T0S6 OrthoDB:EOG4XKV7P NextBio:20876611 Uniprot:Q3T0S6
Length = 257
Score = 123 (48.4 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 43/129 (33%), Positives = 62/129 (48%)
Query: 36 VIQIIPSPAPTVRTANLALVGSGDFLKLILATENMKAGDILKTSMFIP-RIPVRAKEGDA 94
V II P R A LA V D + TE A + + T F+ + G+
Sbjct: 45 VKDIIHDPG---RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNV 101
Query: 95 YPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLV----RTLHDRVVLQLPSKHEVA-V 149
PVG +P G+IVCC+E+ PG+ ARA+GN T++ T RV L SK ++
Sbjct: 102 LPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSA 161
Query: 150 DKHCMAVVA 158
++ + VVA
Sbjct: 162 NRAVVGVVA 170
>UNIPROTKB|E2RIA8 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
KO:K02938 Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 OMA:GRVIRNQ CTD:6132 EMBL:AAEX03008983
RefSeq:XP_858496.1 ProteinModelPortal:E2RIA8 SMR:E2RIA8
PRIDE:E2RIA8 Ensembl:ENSCAFT00000002627 GeneID:475130
KEGG:cfa:475130 NextBio:20851021 HAMAP:MF_01320_A Uniprot:E2RIA8
Length = 257
Score = 123 (48.4 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 43/129 (33%), Positives = 62/129 (48%)
Query: 36 VIQIIPSPAPTVRTANLALVGSGDFLKLILATENMKAGDILKTSMFIP-RIPVRAKEGDA 94
V II P R A LA V D + TE A + + T F+ + G+
Sbjct: 45 VKDIIHDPG---RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNV 101
Query: 95 YPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLV----RTLHDRVVLQLPSKHEVA-V 149
PVG +P G+IVCC+E+ PG+ ARA+GN T++ T RV L SK ++
Sbjct: 102 LPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSA 161
Query: 150 DKHCMAVVA 158
++ + VVA
Sbjct: 162 NRAVVGVVA 170
>UNIPROTKB|P62917 [details] [associations]
symbol:RPL8 "60S ribosomal protein L8" species:9606 "Homo
sapiens" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=NAS;TAS] [GO:0003735 "structural constituent
of ribosome" evidence=NAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0006414 "translational elongation" evidence=TAS] [GO:0006415
"translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR002171 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 InterPro:IPR023672 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 Reactome:REACT_116125
GO:GO:0000184 GO:GO:0006413 GO:GO:0003723 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH471162
GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0006415
GO:GO:0006414 InterPro:IPR008991 SUPFAM:SSF50104
Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625 GO:GO:0019083
KO:K02938 Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 OMA:GRVIRNQ CTD:6132 HOVERGEN:HBG079431
OrthoDB:EOG4XKV7P ChiTaRS:RPL8 EMBL:Z28407 EMBL:AB061821
EMBL:BT007379 EMBL:CR457046 EMBL:AK289459 EMBL:BC000047
EMBL:BC000077 EMBL:BC012197 EMBL:BC013104 EMBL:BC093064
EMBL:AB007168 IPI:IPI00012772 PIR:JN0923 RefSeq:NP_000964.1
RefSeq:NP_150644.1 UniGene:Hs.178551 ProteinModelPortal:P62917
SMR:P62917 IntAct:P62917 MINT:MINT-1135693 STRING:P62917
PhosphoSite:P62917 DMDM:51702823 PaxDb:P62917 PRIDE:P62917
DNASU:6132 Ensembl:ENST00000262584 Ensembl:ENST00000394920
GeneID:6132 KEGG:hsa:6132 UCSC:uc003zeb.3 GeneCards:GC08M145985
HGNC:HGNC:10368 MIM:604177 neXtProt:NX_P62917 PharmGKB:PA34768
InParanoid:P62917 PhylomeDB:P62917 GenomeRNAi:6132 NextBio:23815
ArrayExpress:P62917 Bgee:P62917 CleanEx:HS_RPL8
Genevestigator:P62917 GermOnline:ENSG00000161016 Uniprot:P62917
Length = 257
Score = 123 (48.4 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 43/129 (33%), Positives = 62/129 (48%)
Query: 36 VIQIIPSPAPTVRTANLALVGSGDFLKLILATENMKAGDILKTSMFIP-RIPVRAKEGDA 94
V II P R A LA V D + TE A + + T F+ + G+
Sbjct: 45 VKDIIHDPG---RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNV 101
Query: 95 YPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLV----RTLHDRVVLQLPSKHEVA-V 149
PVG +P G+IVCC+E+ PG+ ARA+GN T++ T RV L SK ++
Sbjct: 102 LPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSA 161
Query: 150 DKHCMAVVA 158
++ + VVA
Sbjct: 162 NRAVVGVVA 170
>UNIPROTKB|F2Z567 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
KO:K02938 Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 OMA:GRVIRNQ CTD:6132 HAMAP:MF_01320_A
EMBL:CU468612 RefSeq:XP_001924964.1 UniGene:Ssc.53780
ProteinModelPortal:F2Z567 SMR:F2Z567 PRIDE:F2Z567
Ensembl:ENSSSCT00000031015 GeneID:100154456 KEGG:ssc:100154456
Uniprot:F2Z567
Length = 257
Score = 123 (48.4 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 43/129 (33%), Positives = 62/129 (48%)
Query: 36 VIQIIPSPAPTVRTANLALVGSGDFLKLILATENMKAGDILKTSMFIP-RIPVRAKEGDA 94
V II P R A LA V D + TE A + + T F+ + G+
Sbjct: 45 VKDIIHDPG---RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNV 101
Query: 95 YPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLV----RTLHDRVVLQLPSKHEVA-V 149
PVG +P G+IVCC+E+ PG+ ARA+GN T++ T RV L SK ++
Sbjct: 102 LPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSA 161
Query: 150 DKHCMAVVA 158
++ + VVA
Sbjct: 162 NRAVVGVVA 170
>MGI|MGI:1350927 [details] [associations]
symbol:Rpl8 "ribosomal protein L8" species:10090 "Mus
musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
InterPro:IPR023672 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 MGI:MGI:1350927 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 KO:K02938 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 eggNOG:COG0090
GeneTree:ENSGT00390000009907 HOGENOM:HOG000232983 OMA:GRVIRNQ
CTD:6132 HOVERGEN:HBG079431 OrthoDB:EOG4XKV7P ChiTaRS:RPL8
EMBL:U67771 EMBL:AK088263 EMBL:AK131970 EMBL:AK145498 EMBL:AK167775
EMBL:AK168769 EMBL:BC043017 IPI:IPI00137787 RefSeq:NP_036183.1
UniGene:Mm.30066 ProteinModelPortal:P62918 SMR:P62918 STRING:P62918
PaxDb:P62918 PRIDE:P62918 Ensembl:ENSMUST00000004072 GeneID:26961
KEGG:mmu:26961 UCSC:uc007wmt.2 InParanoid:P62918 NextBio:304899
Bgee:P62918 CleanEx:MM_RPL8 Genevestigator:P62918
GermOnline:ENSMUSG00000003970 Uniprot:P62918
Length = 257
Score = 123 (48.4 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 43/129 (33%), Positives = 62/129 (48%)
Query: 36 VIQIIPSPAPTVRTANLALVGSGDFLKLILATENMKAGDILKTSMFIP-RIPVRAKEGDA 94
V II P R A LA V D + TE A + + T F+ + G+
Sbjct: 45 VKDIIHDPG---RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNV 101
Query: 95 YPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLV----RTLHDRVVLQLPSKHEVA-V 149
PVG +P G+IVCC+E+ PG+ ARA+GN T++ T RV L SK ++
Sbjct: 102 LPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSA 161
Query: 150 DKHCMAVVA 158
++ + VVA
Sbjct: 162 NRAVVGVVA 170
>RGD|619827 [details] [associations]
symbol:Rpl8 "ribosomal protein L8" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
RGD:619827 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
KO:K02938 Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 GeneTree:ENSGT00390000009907 HOGENOM:HOG000232983
OMA:GRVIRNQ CTD:6132 HOVERGEN:HBG079431 OrthoDB:EOG4XKV7P
EMBL:X62145 EMBL:BC126063 IPI:IPI00215208 PIR:JU0177
RefSeq:NP_001030088.2 RefSeq:XP_002729189.1 RefSeq:XP_003750416.1
UniGene:Rn.127774 UniGene:Rn.9810 ProteinModelPortal:P62919
SMR:P62919 IntAct:P62919 STRING:P62919 PRIDE:P62919
Ensembl:ENSRNOT00000005960 Ensembl:ENSRNOT00000041984
GeneID:100360117 GeneID:100910370 GeneID:26962 KEGG:rno:100360117
KEGG:rno:100910370 KEGG:rno:26962 UCSC:RGD:619827 InParanoid:P62919
NextBio:608033 Genevestigator:P62919 GermOnline:ENSRNOG00000004497
GermOnline:ENSRNOG00000032635 Uniprot:P62919
Length = 257
Score = 123 (48.4 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 43/129 (33%), Positives = 62/129 (48%)
Query: 36 VIQIIPSPAPTVRTANLALVGSGDFLKLILATENMKAGDILKTSMFIP-RIPVRAKEGDA 94
V II P R A LA V D + TE A + + T F+ + G+
Sbjct: 45 VKDIIHDPG---RGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNV 101
Query: 95 YPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLV----RTLHDRVVLQLPSKHEVA-V 149
PVG +P G+IVCC+E+ PG+ ARA+GN T++ T RV L SK ++
Sbjct: 102 LPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSA 161
Query: 150 DKHCMAVVA 158
++ + VVA
Sbjct: 162 NRAVVGVVA 170
>UNIPROTKB|K7GSL7 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF03947 PROSITE:PS00467 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 EMBL:CU468612
Ensembl:ENSSSCT00000035903 Uniprot:K7GSL7
Length = 202
Score = 117 (46.2 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 92 GDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLV----RTLHDRVVLQLPSKHEV 147
G+ PVG +P G+IVCC+E+ PG+ ARA+GN T++ T RV L SK +
Sbjct: 44 GNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVI 103
Query: 148 A-VDKHCMAVVA 158
+ ++ + VVA
Sbjct: 104 SSANRAVVGVVA 115
>UNIPROTKB|E9PIZ3 [details] [associations]
symbol:RPL8 "60S ribosomal protein L8" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002171 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR012340
SUPFAM:SSF50249 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 ChiTaRS:RPL8 HGNC:HGNC:10368
EMBL:AF235103 IPI:IPI00975850 ProteinModelPortal:E9PIZ3 SMR:E9PIZ3
Ensembl:ENST00000534813 ArrayExpress:E9PIZ3 Bgee:E9PIZ3
Uniprot:E9PIZ3
Length = 221
Score = 117 (46.2 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 92 GDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLV----RTLHDRVVLQLPSKHEV 147
G+ PVG +P G+IVCC+E+ PG+ ARA+GN T++ T RV L SK +
Sbjct: 63 GNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVI 122
Query: 148 A-VDKHCMAVVA 158
+ ++ + VVA
Sbjct: 123 SSANRAVVGVVA 134
>UNIPROTKB|K7GLA0 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 EMBL:CU468612
Ensembl:ENSSSCT00000033850 Uniprot:K7GLA0
Length = 221
Score = 117 (46.2 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 92 GDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLV----RTLHDRVVLQLPSKHEV 147
G+ PVG +P G+IVCC+E+ PG+ ARA+GN T++ T RV L SK +
Sbjct: 63 GNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVI 122
Query: 148 A-VDKHCMAVVA 158
+ ++ + VVA
Sbjct: 123 SSANRAVVGVVA 134
>UNIPROTKB|E1BHY4 [details] [associations]
symbol:E1BHY4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 GeneTree:ENSGT00390000009907 EMBL:DAAA02032881
IPI:IPI00710345 PRIDE:E1BHY4 Ensembl:ENSBTAT00000004630 OMA:KAGHAYH
NextBio:20867523 Uniprot:E1BHY4
Length = 257
Score = 117 (46.2 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 92 GDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLV----RTLHDRVVLQLPSKHEV 147
G+ PVG +P G+IVCC+E+ PG+ ARA+GN T++ T RV L SK +
Sbjct: 99 GNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHSPETKKTRVKLPSGSKKVI 158
Query: 148 A-VDKHCMAVVA 158
+ ++ + VVA
Sbjct: 159 SSANRAVVGVVA 170
>UNIPROTKB|P0C8K6 [details] [associations]
symbol:RPL2 "60S ribosomal protein L2, mitochondrial"
species:4530 "Oryza sativa" [GO:0005739 "mitochondrion"
evidence=IC] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PROSITE:PS00467 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:DQ167807 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 RefSeq:YP_002000581.1
ProteinModelPortal:P0C8K6 PRIDE:P0C8K6 GeneID:6450181
KEGG:osa:6450181 Gramene:P0C8K6 HOGENOM:HOG000150660
Genevestigator:P0C8K6 Uniprot:P0C8K6
Length = 502
Score = 113 (44.8 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 85 IPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLVRTLHDRVVLQLPSK 144
+ + +K G++ P+ + MG+ V +E PG+GA ARAAG +++ + +++LPS
Sbjct: 354 LDLNSKVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQCLVRLPSG 413
Query: 145 HEVAVDKHCMAVV 157
E +D C A +
Sbjct: 414 VEKLIDSRCRATI 426
>UNIPROTKB|P92812 [details] [associations]
symbol:RPL2 "60S ribosomal protein L2, mitochondrial"
species:39947 "Oryza sativa Japonica Group" [GO:0005739
"mitochondrion" evidence=IC;ISS] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PROSITE:PS00467 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:BA000029
GenomeReviews:BA000029_GR EMBL:DQ167400 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 RefSeq:YP_002000581.1 GeneID:6450181
KEGG:osa:6450181 EMBL:D78336 PIR:T03019 ProteinModelPortal:P92812
STRING:P92812 PRIDE:P92812 Gramene:P92812 Uniprot:P92812
Length = 502
Score = 113 (44.8 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 85 IPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLVRTLHDRVVLQLPSK 144
+ + +K G++ P+ + MG+ V +E PG+GA ARAAG +++ + +++LPS
Sbjct: 354 LDLNSKVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQCLVRLPSG 413
Query: 145 HEVAVDKHCMAVV 157
E +D C A +
Sbjct: 414 VEKLIDSRCRATI 426
>UNIPROTKB|Q2F969 [details] [associations]
symbol:RPL2 "60S ribosomal protein L2, mitochondrial"
species:39946 "Oryza sativa Indica Group" [GO:0005739
"mitochondrion" evidence=IC] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PROSITE:PS00467 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:DQ167399 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 RefSeq:YP_514664.1
ProteinModelPortal:Q2F969 PRIDE:Q2F969 GeneID:3950683
Gramene:Q2F969 Uniprot:Q2F969
Length = 502
Score = 113 (44.8 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 85 IPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLVRTLHDRVVLQLPSK 144
+ + +K G++ P+ + MG+ V +E PG+GA ARAAG +++ + +++LPS
Sbjct: 354 LDLNSKVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQCLVRLPSG 413
Query: 145 HEVAVDKHCMAVV 157
E +D C A +
Sbjct: 414 VEKLIDSRCRATI 426
>WB|WBGene00004413 [details] [associations]
symbol:rpl-2 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR002171 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 EMBL:Z81453 GO:GO:0006412 GO:GO:0040011 GO:GO:0000003
GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 KO:K02938 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 eggNOG:COG0090
GeneTree:ENSGT00390000009907 HOGENOM:HOG000232983 OMA:GRVIRNQ
PIR:T18676 RefSeq:NP_507940.1 ProteinModelPortal:Q9XVF7 SMR:Q9XVF7
DIP:DIP-24785N IntAct:Q9XVF7 MINT:MINT-1062067 STRING:Q9XVF7
PaxDb:Q9XVF7 PRIDE:Q9XVF7 EnsemblMetazoa:B0250.1.1
EnsemblMetazoa:B0250.1.2 GeneID:180343 KEGG:cel:CELE_B0250.1
UCSC:B0250.1.1 CTD:180343 WormBase:B0250.1 InParanoid:Q9XVF7
NextBio:908952 Uniprot:Q9XVF7
Length = 260
Score = 105 (42.0 bits), Expect = 0.00031, P = 0.00031
Identities = 40/129 (31%), Positives = 62/129 (48%)
Query: 36 VIQIIPSPAPTVRTANLALVGSGDFLKLILATENMKAGDILKTSMFIP-RIPVRAKEGDA 94
V II P R A LA++ D K + A + + T FI + + G+
Sbjct: 45 VKDIIHDPG---RGAPLAIIAFRDPYKYKTVKTTVVAAEGMHTGQFIHCGAKAQIQIGNI 101
Query: 95 YPVGALPMGSIVCCVEKFPGEGAHYARAAGNSCTLVRTLHD--RVVLQLPS--KHEV-AV 149
PVG LP G+ +C VE G+ ARA+GN T++ D + ++LPS K V +V
Sbjct: 102 VPVGTLPEGTTICNVENKSGDRGVIARASGNYATVIAHNPDTKKTRIRLPSGAKKVVQSV 161
Query: 150 DKHCMAVVA 158
++ + +VA
Sbjct: 162 NRAMIGLVA 170
>TIGR_CMR|CBU_0241 [details] [associations]
symbol:CBU_0241 "ribosomal protein L2" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0016740 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
RefSeq:NP_819285.1 ProteinModelPortal:Q83ES1 SMR:Q83ES1
PRIDE:Q83ES1 GeneID:1208122 KEGG:cbu:CBU_0241 PATRIC:17929175
BioCyc:CBUR227377:GJ7S-247-MONOMER Uniprot:Q83ES1
Length = 275
Score = 105 (42.0 bits), Expect = 0.00035, P = 0.00035
Identities = 43/162 (26%), Positives = 79/162 (48%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
R+ V GGG K + + DF+R D +E +V ++ P R+A++ALV D
Sbjct: 48 RITVRRRGGGHKRNYRII-DFKR----DKEGIEGKVERLEYDPN---RSAHIALVLYPDG 99
Query: 61 -LKLILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIVCCVEKFPGEGAHY 119
+ I+A + + G + + P+R G+ P+ +P+G+ + +E PG+GA
Sbjct: 100 ERRYIIAPKGVHKGSKVVSGR---EAPIRP--GNCLPLQNIPLGATIHNIELKPGKGAQL 154
Query: 120 ARAAGNSCTLVRTLHDRVVLQLPS---KHEVAVDKHCMAVVA 158
R+AG S L ++++ S + +AV + C+ V+
Sbjct: 155 VRSAGASAQLAAKEGIYAIIRMRSGETRKILAVCRACIGEVS 196
>ASPGD|ASPL0000011317 [details] [associations]
symbol:AN3649 species:162425 "Emericella nidulans"
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0006631
"fatty acid metabolic process" evidence=IEA] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
Pfam:PF00181 Pfam:PF03947 GO:GO:0006412 GO:GO:0016740 GO:GO:0003723
EMBL:BN001302 GO:GO:0003735 EMBL:AACD01000061 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
HOGENOM:HOG000232982 eggNOG:COG0090 PANTHER:PTHR13691:SF5
OrthoDB:EOG4W9NCQ OMA:QRGNCLP RefSeq:XP_661253.1 STRING:Q5B731
EnsemblFungi:CADANIAT00005086 GeneID:2873068 KEGG:ani:AN3649.2
Uniprot:Q5B731
Length = 405
Score = 105 (42.0 bits), Expect = 0.00069, P = 0.00069
Identities = 45/146 (30%), Positives = 66/146 (45%)
Query: 1 RVVVAGLGGGIKEDIHWVHDFRRGPTDDSPPLEERVIQIIPSPAPTVRTANLALVGSGDF 60
RV V GGG K I V DF+R P + ER+ P + A L +G
Sbjct: 112 RVTVRHHGGGHKRRIRMV-DFKRDAP--GPHIVERIEH---DPGRSAHIALLRSKETGK- 164
Query: 61 LKLILATENMKAGDILKTSMF-IPR--------------IPVR-AKEGDAYPVGALPMGS 104
L ILA + M+AGD++++ M IP + R A G+ P+ +P+GS
Sbjct: 165 LSYILAADGMRAGDVVQSYMAGIPDDLWQSMGGTVDPGVMAARTAWRGNCLPLHMVPVGS 224
Query: 105 IVCCVEKFPGEGAHYARAAGNSCTLV 130
++ V PG G R+AG T++
Sbjct: 225 LIFNVGLRPGGGGQLCRSAGTFATVI 250
>TIGR_CMR|CJE_1872 [details] [associations]
symbol:CJE_1872 "ribosomal protein L2" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 ProtClustDB:PRK09374
PANTHER:PTHR13691:SF5 RefSeq:YP_179842.1 ProteinModelPortal:Q5HS93
SMR:Q5HS93 STRING:Q5HS93 GeneID:3232499 KEGG:cjr:CJE1872
PATRIC:20045576 OMA:LVRQECM BioCyc:CJEJ195099:GJC0-1911-MONOMER
Uniprot:Q5HS93
Length = 276
Score = 102 (41.0 bits), Expect = 0.00094, P = 0.00094
Identities = 34/113 (30%), Positives = 52/113 (46%)
Query: 48 RTANLALVGSGDFLK-LILATENMKAGDILKTSMFIPRIPVRAKEGDAYPVGALPMGSIV 106
R +AL+ D K IL + GDI+ + + K G+A + +P+G+IV
Sbjct: 87 RNCRIALIAYKDGEKRYILQPRGLSVGDIVAAA----ESGLDIKPGNAMKLKNIPVGTIV 142
Query: 107 CCVEKFPGEGAHYARAAGNSCTLVRTLHDRVVLQLPSKHEVAVDKHCMAVVAQ 159
VE PG+G R+AG L+ V+L+L S V CMA + +
Sbjct: 143 HNVELKPGKGGQMIRSAGAYAQLMGKEEKYVILRLASGEMRQVLAECMASIGE 195
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.139 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 159 159 0.00091 106 3 11 22 0.49 31
30 0.43 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 57
No. of states in DFA: 583 (62 KB)
Total size of DFA: 140 KB (2086 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.30u 0.08s 16.38t Elapsed: 00:00:01
Total cpu time: 16.30u 0.08s 16.38t Elapsed: 00:00:01
Start: Thu Aug 15 15:45:25 2013 End: Thu Aug 15 15:45:26 2013