Your job contains 1 sequence.
>psy1342
MVAWIQMTVKPELFKFKCVSISSPQTRRRPESLESTNKKKTRKLRGHVSHGHGRVGKHRK
HPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLVSDQTR
EKYKDNKEGKAPIIDCVKAVSINP
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1342
(144 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-030131-8670 - symbol:zgc:77235 "zgc:77235" ... 326 2.1e-29 1
UNIPROTKB|F1NBX4 - symbol:RPL27A "Uncharacterized protein... 319 1.2e-28 1
UNIPROTKB|E9PLL6 - symbol:RPL27A "60S ribosomal protein L... 317 1.9e-28 1
UNIPROTKB|G1K1B4 - symbol:RPL27A "60S ribosomal protein L... 315 3.1e-28 1
UNIPROTKB|Q56K03 - symbol:RPL27A "60S ribosomal protein L... 315 3.1e-28 1
UNIPROTKB|E2RI34 - symbol:RPL27A "Uncharacterized protein... 315 3.1e-28 1
RGD|1309771 - symbol:Rpl27a "ribosomal protein L27a" spec... 315 3.1e-28 1
UNIPROTKB|F1RGC0 - symbol:LOC100739437 "Uncharacterized p... 314 3.9e-28 1
RGD|1562402 - symbol:RGD1562402 "similar to 60S ribosomal... 312 6.4e-28 1
UNIPROTKB|E1BE42 - symbol:E1BE42 "Uncharacterized protein... 311 8.2e-28 1
UNIPROTKB|F1Q0S5 - symbol:RPL27A "Uncharacterized protein... 311 8.2e-28 1
UNIPROTKB|P46776 - symbol:RPL27A "60S ribosomal protein L... 309 1.3e-27 1
UNIPROTKB|G3MWX5 - symbol:G3MWX5 "Uncharacterized protein... 307 2.2e-27 1
UNIPROTKB|F1PWI8 - symbol:LOC100685993 "Uncharacterized p... 304 4.5e-27 1
UNIPROTKB|I3LK51 - symbol:I3LK51 "Uncharacterized protein... 304 4.5e-27 1
RGD|1565415 - symbol:RGD1565415 "similar to ribosomal pro... 295 4.0e-26 1
RGD|1559972 - symbol:RGD1559972 "similar to ribosomal pro... 292 8.4e-26 1
UNIPROTKB|F1LVD0 - symbol:F1LVD0 "Uncharacterized protein... 292 8.4e-26 1
RGD|1561984 - symbol:RGD1561984 "similar to ribosomal pro... 289 1.8e-25 1
FB|FBgn0261606 - symbol:RpL27A "Ribosomal protein L27A" s... 275 5.3e-24 1
RGD|1561360 - symbol:RGD1561360 "similar to ribosomal pro... 275 5.3e-24 1
UNIPROTKB|J9NXP9 - symbol:J9NXP9 "Uncharacterized protein... 272 1.1e-23 1
UNIPROTKB|F1M5H4 - symbol:F1M5H4 "Uncharacterized protein... 267 3.8e-23 1
WB|WBGene00021350 - symbol:Y37E3.8 species:6239 "Caenorha... 264 7.8e-23 1
POMBASE|SPBC776.11 - symbol:rpl2801 "60S ribosomal protei... 252 1.5e-21 1
UNIPROTKB|F1PIL3 - symbol:F1PIL3 "Uncharacterized protein... 250 2.4e-21 1
UNIPROTKB|F1M3C2 - symbol:F1M3C2 "Uncharacterized protein... 249 3.0e-21 1
RGD|1565679 - symbol:RGD1565679 "similar to 60S ribosomal... 245 8.0e-21 1
DICTYBASE|DDB_G0292388 - symbol:rpl27a "S60 ribosomal pro... 240 2.7e-20 1
POMBASE|SPCC5E4.07 - symbol:rpl2802 "60S ribosomal protei... 240 2.7e-20 1
SGD|S000003071 - symbol:RPL28 "Ribosomal 60S subunit prot... 238 4.4e-20 1
GENEDB_PFALCIPARUM|PFF0885w - symbol:PFF0885w "60S riboso... 237 5.7e-20 1
UNIPROTKB|C6KT23 - symbol:PFF0885w "60S ribosomal protein... 237 5.7e-20 1
TAIR|locus:2028080 - symbol:RPL27AB species:3702 "Arabido... 237 5.7e-20 1
TAIR|locus:2033637 - symbol:AT1G70600 species:3702 "Arabi... 237 5.7e-20 1
UNIPROTKB|F1LZW1 - symbol:F1LZW1 "Uncharacterized protein... 235 9.2e-20 1
UNIPROTKB|F1M730 - symbol:F1M730 "Uncharacterized protein... 221 2.8e-18 1
ASPGD|ASPL0000039794 - symbol:AN10416 species:162425 "Eme... 219 4.6e-18 1
UNIPROTKB|G4ML84 - symbol:MGG_06721 "60S ribosomal protei... 215 1.2e-17 1
UNIPROTKB|F1LVX4 - symbol:F1LVX4 "Uncharacterized protein... 196 1.3e-15 1
UNIPROTKB|E9PJD9 - symbol:RPL27A "60S ribosomal protein L... 163 3.9e-12 1
UNIPROTKB|Q29333 - symbol:RPL27A "60S ribosomal protein L... 121 1.1e-07 1
TAIR|locus:2010406 - symbol:AT1G12960 "AT1G12960" species... 92 0.00013 1
UNIPROTKB|E9PLX7 - symbol:RPL27A "60S ribosomal protein L... 91 0.00017 1
>ZFIN|ZDB-GENE-030131-8670 [details] [associations]
symbol:zgc:77235 "zgc:77235" species:7955 "Danio
rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001196 PROSITE:PS00475 Pfam:PF00828
ZFIN:ZDB-GENE-030131-8670 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0200 KO:K02900 InterPro:IPR021131 SUPFAM:SSF52080
HOVERGEN:HBG054587 OrthoDB:EOG4CJVJC EMBL:BC064441 IPI:IPI00497691
RefSeq:NP_956324.1 UniGene:Dr.75969 ProteinModelPortal:Q6P2M0
SMR:Q6P2M0 STRING:Q6P2M0 PRIDE:Q6P2M0 GeneID:336726 KEGG:dre:336726
InParanoid:Q6P2M0 NextBio:20811875 ArrayExpress:Q6P2M0
Uniprot:Q6P2M0
Length = 148
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 60/104 (57%), Positives = 69/104 (66%)
Query: 36 TNKKKTRKLXXXXXXXXXXXXXXXXXXXXXXNAGGMHHHRINFDKYHPGYFGKVGMRNYH 95
T K KTRKL NAGG+HHHRINFDKYHPGYFGKVGMR+YH
Sbjct: 3 TKKSKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMRHYH 62
Query: 96 IKKNAKWCPIINLDRLWTLVSDQTREKYKDNKEGKAPIIDCVKA 139
+K+N +CP INLD+LWTLVS+QTR Y +G APIID V+A
Sbjct: 63 LKRNTTFCPTINLDKLWTLVSEQTRVNYSQKPDGPAPIIDVVRA 106
>UNIPROTKB|F1NBX4 [details] [associations]
symbol:RPL27A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR001196 PROSITE:PS00475 Pfam:PF00828 GO:GO:0006412
GO:GO:0003735 GO:GO:0022625 InterPro:IPR021131 SUPFAM:SSF52080
OMA:FCPTINL GeneTree:ENSGT00390000005534 EMBL:AADN02030565
IPI:IPI00587714 Ensembl:ENSGALT00000009566 Uniprot:F1NBX4
Length = 148
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 57/101 (56%), Positives = 70/101 (69%)
Query: 39 KKTRKLXXXXXXXXXXXXXXXXXXXXXXNAGGMHHHRINFDKYHPGYFGKVGMRNYHIKK 98
+KTRKL NAGGMHHHRINFDKYHPGYFGKVGMR+YH+K+
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKR 65
Query: 99 NAKWCPIINLDRLWTLVSDQTREKYKDNKEGKAPIIDCVKA 139
N K+CP +NLD+LWTLV++QTR Y N+ G AP+ID V++
Sbjct: 66 NQKFCPTVNLDKLWTLVTEQTRLNYAKNQAGLAPVIDVVRS 106
>UNIPROTKB|E9PLL6 [details] [associations]
symbol:RPL27A "60S ribosomal protein L27a" species:9606
"Homo sapiens" [GO:0005840 "ribosome" evidence=IEA] Pfam:PF00828
GO:GO:0005840 InterPro:IPR021131 SUPFAM:SSF52080 HGNC:HGNC:10329
EMBL:AC091053 IPI:IPI00977964 ProteinModelPortal:E9PLL6 SMR:E9PLL6
Ensembl:ENST00000531978 ArrayExpress:E9PLL6 Bgee:E9PLL6
Uniprot:E9PLL6
Length = 108
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 58/103 (56%), Positives = 70/103 (67%)
Query: 39 KKTRKLXXXXXXXXXXXXXXXXXXXXXXNAGGMHHHRINFDKYHPGYFGKVGMRNYHIKK 98
+KTRKL NAGG+HHHRINFDKYHPGYFGKVGM++YH+K+
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 65
Query: 99 NAKWCPIINLDRLWTLVSDQTREKYKDNKEGKAPIIDCVKAVS 141
N +CP +NLD+LWTLVS+QTR NK G APIID V++VS
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSVS 108
>UNIPROTKB|G1K1B4 [details] [associations]
symbol:RPL27A "60S ribosomal protein L27a" species:9913
"Bos taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR021131 SUPFAM:SSF52080 OMA:HHRINRD UniGene:Bt.23343
GeneTree:ENSGT00390000005534 NextBio:20817618 EMBL:DAAA02040745
PRIDE:G1K1B4 Ensembl:ENSBTAT00000007036 Uniprot:G1K1B4
Length = 147
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 58/101 (57%), Positives = 68/101 (67%)
Query: 39 KKTRKLXXXXXXXXXXXXXXXXXXXXXXNAGGMHHHRINFDKYHPGYFGKVGMRNYHIKK 98
+KTRKL NAGGMHHHRINFDKYHPGYFGKVGMR+YH+K+
Sbjct: 5 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKR 64
Query: 99 NAKWCPIINLDRLWTLVSDQTREKYKDNKEGKAPIIDCVKA 139
N +CP +NLD+LWTLVS+QTR NK G APIID V++
Sbjct: 65 NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 105
>UNIPROTKB|Q56K03 [details] [associations]
symbol:RPL27A "60S ribosomal protein L27a" species:9913
"Bos taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0200 HOGENOM:HOG000231263 KO:K02900 InterPro:IPR021131
SUPFAM:SSF52080 OMA:HHRINRD EMBL:AY911324 EMBL:BC109683
IPI:IPI00694444 RefSeq:NP_001019642.1 UniGene:Bt.23343
ProteinModelPortal:Q56K03 SMR:Q56K03 STRING:Q56K03 PRIDE:Q56K03
Ensembl:ENSBTAT00000025126 GeneID:404190 KEGG:bta:404190 CTD:6157
GeneTree:ENSGT00390000005534 HOVERGEN:HBG054587 OrthoDB:EOG4CJVJC
NextBio:20817618 ArrayExpress:Q56K03 Uniprot:Q56K03
Length = 148
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 58/101 (57%), Positives = 68/101 (67%)
Query: 39 KKTRKLXXXXXXXXXXXXXXXXXXXXXXNAGGMHHHRINFDKYHPGYFGKVGMRNYHIKK 98
+KTRKL NAGGMHHHRINFDKYHPGYFGKVGMR+YH+K+
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKR 65
Query: 99 NAKWCPIINLDRLWTLVSDQTREKYKDNKEGKAPIIDCVKA 139
N +CP +NLD+LWTLVS+QTR NK G APIID V++
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 106
>UNIPROTKB|E2RI34 [details] [associations]
symbol:RPL27A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 KO:K02900
InterPro:IPR021131 SUPFAM:SSF52080 OMA:HHRINRD CTD:6157
GeneTree:ENSGT00390000005534 EMBL:AAEX03013985 EMBL:AAEX03012891
RefSeq:NP_001239154.1 UniGene:Cfa.40197 SMR:E2RI34
Ensembl:ENSCAFT00000011134 Ensembl:ENSCAFT00000017254 GeneID:611398
KEGG:cfa:611398 NextBio:20852440 Uniprot:E2RI34
Length = 148
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 58/101 (57%), Positives = 68/101 (67%)
Query: 39 KKTRKLXXXXXXXXXXXXXXXXXXXXXXNAGGMHHHRINFDKYHPGYFGKVGMRNYHIKK 98
+KTRKL NAGGMHHHRINFDKYHPGYFGKVGMR+YH+K+
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKR 65
Query: 99 NAKWCPIINLDRLWTLVSDQTREKYKDNKEGKAPIIDCVKA 139
N +CP +NLD+LWTLVS+QTR NK G APIID V++
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 106
>RGD|1309771 [details] [associations]
symbol:Rpl27a "ribosomal protein L27a" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISO] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISO] [GO:0022626 "cytosolic ribosome"
evidence=ISO] InterPro:IPR001196 PROSITE:PS00475 RGD:1309771
Pfam:PF00828 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0200 HOGENOM:HOG000231263 KO:K02900 InterPro:IPR021131
SUPFAM:SSF52080 CTD:6157 GeneTree:ENSGT00390000005534
HOVERGEN:HBG054587 OrthoDB:EOG4CJVJC EMBL:X52733 IPI:IPI00371209
PIR:S13071 RefSeq:NP_001099760.1 UniGene:Rn.224527 UniGene:Rn.2722
ProteinModelPortal:P18445 SMR:P18445 STRING:P18445
PhosphoSite:P18445 PRIDE:P18445 Ensembl:ENSRNOT00000019247
GeneID:293418 KEGG:rno:293418 UCSC:RGD:1309771 InParanoid:P18445
NextBio:636059 Genevestigator:P18445 GermOnline:ENSRNOG00000014214
Uniprot:P18445
Length = 148
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 58/101 (57%), Positives = 68/101 (67%)
Query: 39 KKTRKLXXXXXXXXXXXXXXXXXXXXXXNAGGMHHHRINFDKYHPGYFGKVGMRNYHIKK 98
+KTRKL NAGGMHHHRINFDKYHPGYFGKVGMR+YH+K+
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKR 65
Query: 99 NAKWCPIINLDRLWTLVSDQTREKYKDNKEGKAPIIDCVKA 139
N +CP +NLD+LWTLVS+QTR NK G APIID V++
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTRVNAAKNKNGVAPIIDVVRS 106
>UNIPROTKB|F1RGC0 [details] [associations]
symbol:LOC100739437 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR021131 SUPFAM:SSF52080 OMA:FCPTINL
GeneTree:ENSGT00390000005534 EMBL:FP312755
Ensembl:ENSSSCT00000015919 Uniprot:F1RGC0
Length = 148
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 58/101 (57%), Positives = 68/101 (67%)
Query: 39 KKTRKLXXXXXXXXXXXXXXXXXXXXXXNAGGMHHHRINFDKYHPGYFGKVGMRNYHIKK 98
+KTRKL NAGGMHHHRINFDKYHPGYFGKVGMR+YH+K+
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKR 65
Query: 99 NAKWCPIINLDRLWTLVSDQTREKYKDNKEGKAPIIDCVKA 139
N +CP +NLD+LWTLVS+QTR NK G APIID V++
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTRINAAKNKTGAAPIIDVVRS 106
>RGD|1562402 [details] [associations]
symbol:RGD1562402 "similar to 60S ribosomal protein L27a"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001196 PROSITE:PS00475 RGD:1562402 Pfam:PF00828
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR021131
SUPFAM:SSF52080 GeneTree:ENSGT00390000005534 OrthoDB:EOG4CJVJC
OMA:ACVLLKP IPI:IPI00560893 RefSeq:XP_001079874.1
RefSeq:XP_574425.1 PRIDE:D3ZF07 Ensembl:ENSRNOT00000045301
GeneID:499133 KEGG:rno:499133 UCSC:RGD:1562402 CTD:499133
NextBio:701943 Uniprot:D3ZF07
Length = 148
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 57/101 (56%), Positives = 68/101 (67%)
Query: 39 KKTRKLXXXXXXXXXXXXXXXXXXXXXXNAGGMHHHRINFDKYHPGYFGKVGMRNYHIKK 98
+KTRKL NAGGMHHHRINFDKYHPGYFGKVG+R+YH+K+
Sbjct: 6 RKTRKLRGHVSHSHGRIGKHRKHPGGLGNAGGMHHHRINFDKYHPGYFGKVGIRHYHLKR 65
Query: 99 NAKWCPIINLDRLWTLVSDQTREKYKDNKEGKAPIIDCVKA 139
N +CP +NLD+LWTLVS+QTR NK G APIID V++
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTRVNAAKNKNGVAPIIDVVRS 106
>UNIPROTKB|E1BE42 [details] [associations]
symbol:E1BE42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] Pfam:PF00828 GO:GO:0005840 InterPro:IPR021131
SUPFAM:SSF52080 GeneTree:ENSGT00390000005534 OMA:ACVLLKP
EMBL:DAAA02007126 IPI:IPI00823813 Ensembl:ENSBTAT00000028851
NextBio:20928048 Uniprot:E1BE42
Length = 148
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 57/101 (56%), Positives = 68/101 (67%)
Query: 39 KKTRKLXXXXXXXXXXXXXXXXXXXXXXNAGGMHHHRINFDKYHPGYFGKVGMRNYHIKK 98
+KTRKL NAGGMHHHRINFDKYHPGYFGKVGMR+YH+K+
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKR 65
Query: 99 NAKWCPIINLDRLWTLVSDQTREKYKDNKEGKAPIIDCVKA 139
N +CP +NLD+LWTLVS+QT+ NK G APIID V++
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTQVNAAKNKTGAAPIIDVVRS 106
>UNIPROTKB|F1Q0S5 [details] [associations]
symbol:RPL27A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR021131 SUPFAM:SSF52080 GeneTree:ENSGT00390000005534
OMA:ACVLLKP EMBL:AAEX03012891 Ensembl:ENSCAFT00000017640
Uniprot:F1Q0S5
Length = 164
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 53/73 (72%), Positives = 62/73 (84%)
Query: 67 NAGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLVSDQTREKYKDN 126
NAGGMHHHRINFDKYHPGYFGKVGMR+YH+K+N +CP +NLD+LWTLVS+QTR N
Sbjct: 41 NAGGMHHHRINFDKYHPGYFGKVGMRHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKN 100
Query: 127 KEGKAPIIDCVKA 139
K G APIID V++
Sbjct: 101 KTGAAPIIDVVRS 113
>UNIPROTKB|P46776 [details] [associations]
symbol:RPL27A "60S ribosomal protein L27a" species:9606
"Homo sapiens" [GO:0006412 "translation" evidence=NAS;TAS]
[GO:0003735 "structural constituent of ribosome" evidence=NAS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0003723 "RNA binding" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 Reactome:REACT_116125 EMBL:CH471064 GO:GO:0000184
GO:GO:0006413 GO:GO:0003723 GO:GO:0003735 GO:GO:0006415
GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625
GO:GO:0019083 eggNOG:COG0200 HOGENOM:HOG000231263 KO:K02900
InterPro:IPR021131 SUPFAM:SSF52080 OMA:HHRINRD CTD:6157
HOVERGEN:HBG054587 OrthoDB:EOG4CJVJC EMBL:U14968 EMBL:AB020236
EMBL:AK311767 EMBL:BC005326 EMBL:BC020169 EMBL:AB007178
IPI:IPI00456758 PIR:S55914 RefSeq:NP_000981.1 UniGene:Hs.523463
ProteinModelPortal:P46776 SMR:P46776 IntAct:P46776
MINT:MINT-1150308 STRING:P46776 PhosphoSite:P46776 DMDM:1173017
SWISS-2DPAGE:P46776 PaxDb:P46776 PRIDE:P46776
Ensembl:ENST00000314138 GeneID:6157 KEGG:hsa:6157 UCSC:uc001mgs.4
GeneCards:GC11P008703 HGNC:HGNC:10329 MIM:603637 neXtProt:NX_P46776
PharmGKB:PA34708 InParanoid:P46776 PhylomeDB:P46776 GenomeRNAi:6157
NextBio:23911 ArrayExpress:P46776 Bgee:P46776 CleanEx:HS_RPL27A
Genevestigator:P46776 GermOnline:ENSG00000166441 Uniprot:P46776
Length = 148
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 56/101 (55%), Positives = 68/101 (67%)
Query: 39 KKTRKLXXXXXXXXXXXXXXXXXXXXXXNAGGMHHHRINFDKYHPGYFGKVGMRNYHIKK 98
+KTRKL NAGG+HHHRINFDKYHPGYFGKVGM++YH+K+
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 65
Query: 99 NAKWCPIINLDRLWTLVSDQTREKYKDNKEGKAPIIDCVKA 139
N +CP +NLD+LWTLVS+QTR NK G APIID V++
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 106
>UNIPROTKB|G3MWX5 [details] [associations]
symbol:G3MWX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR021131 SUPFAM:SSF52080 OMA:FCPTINL
GeneTree:ENSGT00390000005534 EMBL:DAAA02014587
Ensembl:ENSBTAT00000026400 NextBio:20925035 Uniprot:G3MWX5
Length = 148
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 57/101 (56%), Positives = 67/101 (66%)
Query: 39 KKTRKLXXXXXXXXXXXXXXXXXXXXXXNAGGMHHHRINFDKYHPGYFGKVGMRNYHIKK 98
+KTRKL NAGGMHHHRINFDKYHPGYFGKVGMR+YH+K+
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKR 65
Query: 99 NAKWCPIINLDRLWTLVSDQTREKYKDNKEGKAPIIDCVKA 139
N +CP + LD+LWTLVS+QTR NK G APIID V++
Sbjct: 66 NQSFCPTVYLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 106
>UNIPROTKB|F1PWI8 [details] [associations]
symbol:LOC100685993 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
Pfam:PF00828 GO:GO:0005840 InterPro:IPR021131 SUPFAM:SSF52080
GeneTree:ENSGT00390000005534 EMBL:AAEX03017148
Ensembl:ENSCAFT00000016285 OMA:SRREEKI Uniprot:F1PWI8
Length = 149
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 58/101 (57%), Positives = 67/101 (66%)
Query: 40 KTRKLXXXXXXXXXXXXXXXXXXXXXXNAGGMHHHRINFDKYHPGYFGKVGMRNYHIKKN 99
KTRKL NAGGMHHHRINFDKYHPGYFGKVGMR+YH+K+N
Sbjct: 7 KTRKLRGHVSHGHSRIGKHWKHPGGQGNAGGMHHHRINFDKYHPGYFGKVGMRHYHLKRN 66
Query: 100 AKWCPI-INLDRLWTLVSDQTREKYKDNKEGKAPIIDCVKA 139
+CP +NLD+LWTLVS+QTR NK G APIID V++
Sbjct: 67 QSFCPTTVNLDKLWTLVSEQTRVNATKNKTGAAPIIDVVRS 107
>UNIPROTKB|I3LK51 [details] [associations]
symbol:I3LK51 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001196 PROSITE:PS00475 Pfam:PF00828 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR021131 SUPFAM:SSF52080
GeneTree:ENSGT00390000005534 OMA:ACVLLKP EMBL:FP102759
Ensembl:ENSSSCT00000026597 Uniprot:I3LK51
Length = 163
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 52/73 (71%), Positives = 61/73 (83%)
Query: 67 NAGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLVSDQTREKYKDN 126
NAGGMHHHRINFDKYHPGYFGKV MR+YH+K+N +CP +NLD+LWTLVS+QTR N
Sbjct: 40 NAGGMHHHRINFDKYHPGYFGKVAMRHYHLKRNQSFCPTVNLDKLWTLVSEQTRINAAKN 99
Query: 127 KEGKAPIIDCVKA 139
K G APIID V++
Sbjct: 100 KTGAAPIIDVVRS 112
>RGD|1565415 [details] [associations]
symbol:RGD1565415 "similar to ribosomal protein L27a"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001196 PROSITE:PS00475 RGD:1565415 Pfam:PF00828
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR021131
SUPFAM:SSF52080 GeneTree:ENSGT00390000005534 OrthoDB:EOG4CJVJC
IPI:IPI00554298 RefSeq:XP_001057231.1 RefSeq:XP_575475.1
Ensembl:ENSRNOT00000041621 GeneID:500123 KEGG:rno:500123
UCSC:RGD:1565415 CTD:500123 OMA:SHGHCRI NextBio:705163
Uniprot:D3ZG03
Length = 148
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 56/101 (55%), Positives = 65/101 (64%)
Query: 39 KKTRKLXXXXXXXXXXXXXXXXXXXXXXNAGGMHHHRINFDKYHPGYFGKVGMRNYHIKK 98
+KTRKL NAGG HHHRIN DKYHPGYFGKVGMR+YH+K+
Sbjct: 6 RKTRKLWGHVSHGHCRIGKHRKHPGGRGNAGGEHHHRINSDKYHPGYFGKVGMRHYHLKR 65
Query: 99 NAKWCPIINLDRLWTLVSDQTREKYKDNKEGKAPIIDCVKA 139
N +CP +NLD+LWTLVS QTR NK G APIID V++
Sbjct: 66 NQSFCPTVNLDKLWTLVSKQTRVNAAKNKTGAAPIIDVVRS 106
>RGD|1559972 [details] [associations]
symbol:RGD1559972 "similar to ribosomal protein L27a"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] InterPro:IPR001196 PROSITE:PS00475 RGD:1559972
Pfam:PF00828 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR021131 SUPFAM:SSF52080 GeneTree:ENSGT00390000005534
OrthoDB:EOG4CJVJC IPI:IPI00358600 PRIDE:D4AAY6
Ensembl:ENSRNOT00000041326 UCSC:RGD:1559972 Uniprot:D4AAY6
Length = 148
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 55/101 (54%), Positives = 65/101 (64%)
Query: 39 KKTRKLXXXXXXXXXXXXXXXXXXXXXXNAGGMHHHRINFDKYHPGYFGKVGMRNYHIKK 98
+KTRKL NAGG+HHHRINFDKYHPGYF KVGMR H+K+
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFVKVGMRQCHLKR 65
Query: 99 NAKWCPIINLDRLWTLVSDQTREKYKDNKEGKAPIIDCVKA 139
N +CP +NLD+LWTLVS+QTR NK G APIID V++
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGVAPIIDVVRS 106
>UNIPROTKB|F1LVD0 [details] [associations]
symbol:F1LVD0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005840 "ribosome" evidence=IEA]
Pfam:PF00828 GO:GO:0005840 InterPro:IPR021131 SUPFAM:SSF52080
GeneTree:ENSGT00390000005534 IPI:IPI00366608
Ensembl:ENSRNOT00000033738 Uniprot:F1LVD0
Length = 136
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 50/71 (70%), Positives = 58/71 (81%)
Query: 67 NAGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLVSDQTREKYKDN 126
NAGG+HHHRINFDKYHPGYF KVGMR+YH+K+N +CP +NLD+LWTLVS+QTR N
Sbjct: 22 NAGGLHHHRINFDKYHPGYFRKVGMRHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKN 81
Query: 127 KEGKAPIIDCV 137
K G AP ID V
Sbjct: 82 KTGAAPTIDVV 92
>RGD|1561984 [details] [associations]
symbol:RGD1561984 "similar to ribosomal protein L27a"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001196 PROSITE:PS00475 RGD:1561984 Pfam:PF00828
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR021131
SUPFAM:SSF52080 GeneTree:ENSGT00390000005534 OrthoDB:EOG4CJVJC
IPI:IPI00366149 RefSeq:XP_001071033.1 RefSeq:XP_236218.1
Ensembl:ENSRNOT00000041555 GeneID:315642 KEGG:rno:315642
UCSC:RGD:1561984 CTD:315642 OMA:HHYRINS NextBio:669550
Uniprot:D3ZI60
Length = 148
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 49/73 (67%), Positives = 60/73 (82%)
Query: 67 NAGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLVSDQTREKYKDN 126
NAGG+HH+RIN DKYHPGYFGK GMR+YH+K+N +CP +NLD+LWTLVS+QTR N
Sbjct: 34 NAGGVHHYRINSDKYHPGYFGKAGMRHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKN 93
Query: 127 KEGKAPIIDCVKA 139
K G APIID V++
Sbjct: 94 KTGAAPIIDVVRS 106
>FB|FBgn0261606 [details] [associations]
symbol:RpL27A "Ribosomal protein L27A" species:7227
"Drosophila melanogaster" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS;NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISS;IDA;NAS] [GO:0006412 "translation"
evidence=ISS;NAS] [GO:0005840 "ribosome" evidence=IDA;NAS]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0051298
"centrosome duplication" evidence=IMP] InterPro:IPR001196
PROSITE:PS00475 Pfam:PF00828 EMBL:AE014134 GO:GO:0051298
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0000022
eggNOG:COG0200 KO:K02900 InterPro:IPR021131 SUPFAM:SSF52080
CTD:6157 GeneTree:ENSGT00390000005534 EMBL:X74484 EMBL:U66357
EMBL:U66358 EMBL:AY071144 PIR:JC2392 PIR:JC6202 RefSeq:NP_476963.1
UniGene:Dm.295 ProteinModelPortal:P41092 SMR:P41092 DIP:DIP-18398N
MINT:MINT-874607 STRING:P41092 PaxDb:P41092
EnsemblMetazoa:FBtr0077452 GeneID:33654 KEGG:dme:Dmel_CG15442
FlyBase:FBgn0261606 InParanoid:P41092 OMA:HHHRTNL OrthoDB:EOG48W9JC
PhylomeDB:P41092 ChiTaRS:RPL27A GenomeRNAi:33654 NextBio:784636
GermOnline:CG15442 Uniprot:P41092
Length = 149
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 52/106 (49%), Positives = 66/106 (62%)
Query: 33 LESTNKKKTRKLXXXXXXXXXXXXXXXXXXXXXXNAGGMHHHRINFDKYHPGYFGKVGMR 92
+ + +KKTRKL NAGGMHHHRINFDKYHPGYFGKVGMR
Sbjct: 1 MSNIKRKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMR 60
Query: 93 NYHIKKNAKWCPIINLDRLWTLVSDQTREKYKDNKEGKAPIIDCVK 138
N+H+++ K+ P INLD+LW+LV + + + K KAP+ID VK
Sbjct: 61 NFHLRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVK 106
>RGD|1561360 [details] [associations]
symbol:RGD1561360 "similar to ribosomal protein L27a"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001196 PROSITE:PS00475 RGD:1561360 Pfam:PF00828
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR021131
SUPFAM:SSF52080 OrthoDB:EOG4CJVJC IPI:IPI00369933
Ensembl:ENSRNOT00000031606 NextBio:651011 Uniprot:D3ZUK0
Length = 147
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 47/73 (64%), Positives = 59/73 (80%)
Query: 67 NAGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLVSDQTREKYKDN 126
NAGG HHHRIN +K+HPG+FGK GMR+YH+K+N +CP +NLD+LWTLVS+QTR N
Sbjct: 33 NAGGEHHHRINSNKHHPGHFGKAGMRHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKN 92
Query: 127 KEGKAPIIDCVKA 139
K G APIID V++
Sbjct: 93 KTGVAPIIDVVQS 105
>UNIPROTKB|J9NXP9 [details] [associations]
symbol:J9NXP9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] Pfam:PF00828
GO:GO:0005840 InterPro:IPR021131 SUPFAM:SSF52080
GeneTree:ENSGT00390000005534 EMBL:AAEX03012968
Ensembl:ENSCAFT00000000835 Uniprot:J9NXP9
Length = 147
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 49/73 (67%), Positives = 58/73 (79%)
Query: 67 NAGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLVSDQTREKYKDN 126
NAGGMHHHRINFDKYH GYFGKVGMR+YH+K+N +CP +NL +LWTLVS+QT N
Sbjct: 34 NAGGMHHHRINFDKYHTGYFGKVGMRHYHLKRNQSFCPTVNLHKLWTLVSEQTWVNATKN 93
Query: 127 KEGKAPIIDCVKA 139
K G A IID V++
Sbjct: 94 KTG-ATIIDVVRS 105
>UNIPROTKB|F1M5H4 [details] [associations]
symbol:F1M5H4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005840 "ribosome" evidence=IEA]
Pfam:PF00828 GO:GO:0005840 InterPro:IPR021131 SUPFAM:SSF52080
GeneTree:ENSGT00390000005534 IPI:IPI00947741
Ensembl:ENSRNOT00000046786 Uniprot:F1M5H4
Length = 146
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 47/73 (64%), Positives = 59/73 (80%)
Query: 67 NAGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLVSDQTREKYKDN 126
NAGG ++HRINFDKYHPGYFGKVGMR+YH+K++ +CP +NLD+LW LVS+QTR N
Sbjct: 35 NAGG-NYHRINFDKYHPGYFGKVGMRHYHLKRSQSFCPTVNLDKLWMLVSEQTRVNAVKN 93
Query: 127 KEGKAPIIDCVKA 139
K G API D V++
Sbjct: 94 KTGAAPITDIVRS 106
>WB|WBGene00021350 [details] [associations]
symbol:Y37E3.8 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR001196 PROSITE:PS00475 Pfam:PF00828 GO:GO:0009792
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:FO081769
eggNOG:COG0200 HOGENOM:HOG000231263 KO:K02900 InterPro:IPR021131
SUPFAM:SSF52080 OMA:HHRINRD GeneTree:ENSGT00390000005534
RefSeq:NP_490927.1 ProteinModelPortal:Q9BKU5 SMR:Q9BKU5
STRING:Q9BKU5 PaxDb:Q9BKU5 PRIDE:Q9BKU5 EnsemblMetazoa:Y37E3.8a.1
EnsemblMetazoa:Y37E3.8a.2 GeneID:171767 KEGG:cel:CELE_Y37E3.8
UCSC:Y37E3.8a.1 CTD:171767 WormBase:Y37E3.8a InParanoid:Q9BKU5
NextBio:872603 ArrayExpress:Q9BKU5 Uniprot:Q9BKU5
Length = 145
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 49/100 (49%), Positives = 61/100 (61%)
Query: 39 KKTRKLXXXXXXXXXXXXXXXXXXXXXXNAGGMHHHRINFDKYHPGYFGKVGMRNYHIKK 98
+KTRKL NAGG HHHRIN DKYHPGYFGKVGMR +H+ K
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINRDKYHPGYFGKVGMRVFHLNK 65
Query: 99 NAKWCPIINLDRLWTLVSDQTREKYKDNKEGKAPIIDCVK 138
N +CP +N++RLW+LV + R+K GK+P+IDC K
Sbjct: 66 NQHYCPTVNVERLWSLVPQEVRDKATG---GKSPVIDCTK 102
>POMBASE|SPBC776.11 [details] [associations]
symbol:rpl2801 "60S ribosomal protein L27/L28"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006412 "translation" evidence=ISO] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR001196 PROSITE:PS00475 PomBase:SPBC776.11 Pfam:PF00828
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003735
GO:GO:0002181 GO:GO:0022625 eggNOG:COG0200 HOGENOM:HOG000231263
KO:K02900 InterPro:IPR021131 SUPFAM:SSF52080 OMA:HHHRTNL
OrthoDB:EOG47WRZ6 EMBL:Z37501 PIR:S60001 RefSeq:NP_596326.1
ProteinModelPortal:P57728 SMR:P57728 STRING:P57728
EnsemblFungi:SPBC776.11.1 GeneID:2541130 KEGG:spo:SPBC776.11
NextBio:20802243 Uniprot:P57728
Length = 148
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 48/104 (46%), Positives = 61/104 (58%)
Query: 36 TNKKKTRKLXXXXXXXXXXXXXXXXXXXXXXNAGGMHHHRINFDKYHPGYFGKVGMRNYH 95
T+ KTRKL AGG+ H R +FDKYHPGYFGKVGMR +H
Sbjct: 3 THTSKTRKLRGHVSAGHGRIGKHRKHPGGRGKAGGLQHLRSHFDKYHPGYFGKVGMRRFH 62
Query: 96 IKKNAKWCPIINLDRLWTLVSDQTREKYKDNKEGKAPIIDCVKA 139
+ KN W P +NLDRLWTLV ++TREKY AP+I+ +++
Sbjct: 63 LMKNPLWRPTVNLDRLWTLVPNETREKYLGKNTEVAPVINVLQS 106
>UNIPROTKB|F1PIL3 [details] [associations]
symbol:F1PIL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] Pfam:PF00828
GO:GO:0005840 InterPro:IPR021131 SUPFAM:SSF52080
GeneTree:ENSGT00390000005534 EMBL:AAEX03013089
ProteinModelPortal:F1PIL3 Ensembl:ENSCAFT00000006906 OMA:IHYHRIN
Uniprot:F1PIL3
Length = 136
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 44/73 (60%), Positives = 54/73 (73%)
Query: 67 NAGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLVSDQTREKYKDN 126
+A GMHHHRINF+KYHP Y GKVGMR+YH K++ CP +NLD+LWTLVS Q + N
Sbjct: 25 DASGMHHHRINFNKYHPRYSGKVGMRHYHSKRSQSLCPTVNLDKLWTLVSGQAQVNAAKN 84
Query: 127 KEGKAPIIDCVKA 139
K G PIID V++
Sbjct: 85 KTGAVPIIDVVQS 97
>UNIPROTKB|F1M3C2 [details] [associations]
symbol:F1M3C2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005840 "ribosome" evidence=IEA]
Pfam:PF00828 GO:GO:0022625 InterPro:IPR021131 SUPFAM:SSF52080
GeneTree:ENSGT00390000005534 IPI:IPI00951975
Ensembl:ENSRNOT00000031419 Uniprot:F1M3C2
Length = 145
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 44/71 (61%), Positives = 56/71 (78%)
Query: 67 NAGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLVSDQTREKYKDN 126
+AGGM HHRINFDKY+PG FGKVG+R+Y +K+N +C +NLD+ WTLVS+QTR+ N
Sbjct: 30 DAGGMRHHRINFDKYNPGSFGKVGVRHYCLKRNQSFCLAVNLDKSWTLVSEQTRDNATKN 89
Query: 127 KEGKAPIIDCV 137
K G API+D V
Sbjct: 90 KTGAAPIMDVV 100
>RGD|1565679 [details] [associations]
symbol:RGD1565679 "similar to 60S ribosomal protein L27a (L29)"
species:10116 "Rattus norvegicus" [GO:0005840 "ribosome"
evidence=IEA] RGD:1565679 Pfam:PF00828 GO:GO:0005840
InterPro:IPR021131 SUPFAM:SSF52080 GeneTree:ENSGT00390000005534
OrthoDB:EOG4CJVJC IPI:IPI00781596 RefSeq:XP_001073308.1
RefSeq:XP_234016.1 Ensembl:ENSRNOT00000060587 GeneID:298892
KEGG:rno:298892 CTD:298892 NextBio:644470 Uniprot:D4AAX8
Length = 144
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 41/69 (59%), Positives = 51/69 (73%)
Query: 67 NAGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLVSDQTREKYKDN 126
NAGG HHRI+FDKYHPGYF KV R YH+K+N ++CP +NLD+ WTL+S+QTR N
Sbjct: 34 NAGGTRHHRIDFDKYHPGYFRKVRRRRYHLKRNQRFCPTVNLDKSWTLISEQTRVNAVKN 93
Query: 127 KEGKAPIID 135
+ G PI D
Sbjct: 94 RTGAVPITD 102
>DICTYBASE|DDB_G0292388 [details] [associations]
symbol:rpl27a "S60 ribosomal protein L27a"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA;ISS]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001196 PROSITE:PS00475
dictyBase:DDB_G0292388 Pfam:PF00828 GenomeReviews:CM000155_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AAFI02000190
eggNOG:COG0200 KO:K02900 InterPro:IPR021131 SUPFAM:SSF52080
OMA:FCPTINL EMBL:D50338 PIR:JE0320 RefSeq:XP_629601.1
ProteinModelPortal:P48160 SMR:P48160 STRING:P48160 PRIDE:P48160
EnsemblProtists:DDB0201638 GeneID:8628661 KEGG:ddi:DDB_G0292388
ProtClustDB:PTZ00160 Uniprot:P48160
Length = 148
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 37/69 (53%), Positives = 53/69 (76%)
Query: 67 NAGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLVSDQTREKYKDN 126
NAGG+ HHRINFDKYHPGYFGK+GMR++H+ +N CP ++L+++WTLV + R+
Sbjct: 34 NAGGLTHHRINFDKYHPGYFGKLGMRHFHLLRNQYHCPTVSLEKIWTLVPESVRKSLAAK 93
Query: 127 KEGKAPIID 135
+G AP++D
Sbjct: 94 NDGTAPVVD 102
>POMBASE|SPCC5E4.07 [details] [associations]
symbol:rpl2802 "60S ribosomal protein L27/L28"
species:4896 "Schizosaccharomyces pombe" [GO:0003735 "structural
constituent of ribosome" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006412 "translation" evidence=ISO] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR001196 PROSITE:PS00475 PomBase:SPCC5E4.07 Pfam:PF00828
GO:GO:0005739 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0022625 HOGENOM:HOG000231263 KO:K02900
InterPro:IPR021131 SUPFAM:SSF52080 EMBL:X57207 EMBL:X80929
PIR:S60002 RefSeq:NP_587907.1 ProteinModelPortal:P36585 SMR:P36585
IntAct:P36585 STRING:P36585 EnsemblFungi:SPCC5E4.07.1
GeneID:2539548 KEGG:spo:SPCC5E4.07 OMA:ACVLLKP OrthoDB:EOG47WRZ6
NextBio:20800708 Uniprot:P36585
Length = 148
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 45/104 (43%), Positives = 60/104 (57%)
Query: 36 TNKKKTRKLXXXXXXXXXXXXXXXXXXXXXXNAGGMHHHRINFDKYHPGYFGKVGMRNYH 95
T+ KTRKL AGG+ H R +FDKYHPGYFGKVGMR +H
Sbjct: 3 THVSKTRKLRGHVSAGHGRIGKHRKHPGGRGKAGGLQHLRSHFDKYHPGYFGKVGMRRFH 62
Query: 96 IKKNAKWCPIINLDRLWTLVSDQTREKYKDNKEGKAPIIDCVKA 139
+ KN W P +NLDRLWTL+ ++ R+KY AP+I+ +++
Sbjct: 63 LMKNPLWRPTVNLDRLWTLLPNEARDKYLGKNTEVAPVINVLQS 106
>SGD|S000003071 [details] [associations]
symbol:RPL28 "Ribosomal 60S subunit protein L28" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IMP]
[GO:0006412 "translation" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=TAS] [GO:0002181 "cytoplasmic translation" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0046677 "response to antibiotic" evidence=IEA] [GO:0046898
"response to cycloheximide" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;TAS] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001196 PROSITE:PS00475
SGD:S000003071 Pfam:PF00828 GO:GO:0005634 EMBL:BK006941
GO:GO:0046677 GO:GO:0003723 GO:GO:0003735 GO:GO:0002181 PDB:4B6A
PDBsum:4B6A GO:GO:0046898 GO:GO:0022625 eggNOG:COG0200
HOGENOM:HOG000231263 KO:K02900 InterPro:IPR021131 SUPFAM:SSF52080
PDB:1K5Y PDB:1S1I PDB:3IZS PDB:3O58 PDB:3O5H PDB:3U5E PDB:3U5I
PDBsum:1K5Y PDBsum:1S1I PDBsum:3IZS PDBsum:3O58 PDBsum:3O5H
PDBsum:3U5E PDBsum:3U5I GeneTree:ENSGT00390000005534 OMA:HHHRTNL
OrthoDB:EOG47WRZ6 EMBL:X01573 EMBL:Z72625 EMBL:M19490 PIR:A02782
RefSeq:NP_011412.1 ProteinModelPortal:P02406 SMR:P02406
IntAct:P02406 MINT:MINT-1324980 STRING:P02406 PaxDb:P02406
PeptideAtlas:P02406 EnsemblFungi:YGL103W GeneID:852775
KEGG:sce:YGL103W EvolutionaryTrace:P02406 NextBio:972248
Genevestigator:P02406 GermOnline:YGL103W Uniprot:P02406
Length = 149
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 41/73 (56%), Positives = 54/73 (73%)
Query: 68 AGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLVSDQTREKY-KDN 126
AGG HHHRIN DKYHPGYFGKVGMR +H ++ W P++NLD+LWTL+ + R++Y K
Sbjct: 35 AGGQHHHRINMDKYHPGYFGKVGMRYFHKQQAHFWKPVLNLDKLWTLIPEDKRDQYLKSA 94
Query: 127 KEGKAPIIDCVKA 139
+ AP+ID + A
Sbjct: 95 SKETAPVIDTLAA 107
>GENEDB_PFALCIPARUM|PFF0885w [details] [associations]
symbol:PFF0885w "60S ribosomal protein L27a,
putative" species:5833 "Plasmodium falciparum" [GO:0015934 "large
ribosomal subunit" evidence=ISS] InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 GO:GO:0006412 GO:GO:0003735 EMBL:AL844505
GO:GO:0015934 HOGENOM:HOG000231263 InterPro:IPR021131
SUPFAM:SSF52080 OMA:FCPTINL ProtClustDB:PTZ00160 RefSeq:XP_966168.1
ProteinModelPortal:C6KT23 SMR:C6KT23 PRIDE:C6KT23
EnsemblProtists:PFF0885w:mRNA GeneID:3885802 KEGG:pfa:PFF0885w
EuPathDB:PlasmoDB:PF3D7_0618300 Uniprot:C6KT23
Length = 148
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 39/71 (54%), Positives = 57/71 (80%)
Query: 68 AGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLVSDQTREKYKDNK 127
AGG+HH RINFDKYHPGYFGKVGMR+ ++ KN +CP IN+D+LW L+ ++ ++++ +NK
Sbjct: 35 AGGLHHMRINFDKYHPGYFGKVGMRHLNLLKNRTYCPTINVDKLWGLLPEEKKKEFSENK 94
Query: 128 EGKAPIIDCVK 138
+ AP+ID +
Sbjct: 95 D-IAPVIDVTR 104
>UNIPROTKB|C6KT23 [details] [associations]
symbol:PFF0885w "60S ribosomal protein L27a, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0015934 "large
ribosomal subunit" evidence=ISS] InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 GO:GO:0006412 GO:GO:0003735 EMBL:AL844505
GO:GO:0015934 HOGENOM:HOG000231263 InterPro:IPR021131
SUPFAM:SSF52080 OMA:FCPTINL ProtClustDB:PTZ00160 RefSeq:XP_966168.1
ProteinModelPortal:C6KT23 SMR:C6KT23 PRIDE:C6KT23
EnsemblProtists:PFF0885w:mRNA GeneID:3885802 KEGG:pfa:PFF0885w
EuPathDB:PlasmoDB:PF3D7_0618300 Uniprot:C6KT23
Length = 148
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 39/71 (54%), Positives = 57/71 (80%)
Query: 68 AGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLVSDQTREKYKDNK 127
AGG+HH RINFDKYHPGYFGKVGMR+ ++ KN +CP IN+D+LW L+ ++ ++++ +NK
Sbjct: 35 AGGLHHMRINFDKYHPGYFGKVGMRHLNLLKNRTYCPTINVDKLWGLLPEEKKKEFSENK 94
Query: 128 EGKAPIIDCVK 138
+ AP+ID +
Sbjct: 95 D-IAPVIDVTR 104
>TAIR|locus:2028080 [details] [associations]
symbol:RPL27AB species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=ISS;TAS] [GO:0015934 "large ribosomal
subunit" evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0009908 "flower
development" evidence=IMP] [GO:0010229 "inflorescence development"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001196 PROSITE:PS00475 Pfam:PF00828 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005730 GO:GO:0006412
GO:GO:0003735 GO:GO:0009908 GO:GO:0010229 EMBL:AC005292
GO:GO:0022625 eggNOG:COG0200 HOGENOM:HOG000231263 KO:K02900
ProtClustDB:CLSN2682070 InterPro:IPR021131 SUPFAM:SSF52080
EMBL:AF324716 EMBL:AF349525 EMBL:AF410280 EMBL:BT000542 EMBL:Z26208
IPI:IPI00544566 RefSeq:NP_173743.1 UniGene:At.20789
ProteinModelPortal:Q9LR33 SMR:Q9LR33 IntAct:Q9LR33 STRING:Q9LR33
PaxDb:Q9LR33 PRIDE:Q9LR33 EnsemblPlants:AT1G23290.1 GeneID:838938
KEGG:ath:AT1G23290 TAIR:At1g23290 InParanoid:Q9LR33 OMA:HHRINRD
PhylomeDB:Q9LR33 Genevestigator:Q9LR33 GermOnline:AT1G23290
Uniprot:Q9LR33
Length = 146
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 67 NAGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLVSDQTREKY-KD 125
NAGGMHHHRI FDKYHPGYFGKVGMR +H +N +CPI+NLD+LW+LV + + K KD
Sbjct: 34 NAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFFCPIVNLDKLWSLVPEDVKAKSSKD 93
Query: 126 NKEGKAPIID 135
N P+ID
Sbjct: 94 N----VPLID 99
>TAIR|locus:2033637 [details] [associations]
symbol:AT1G70600 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0022626 "cytosolic ribosome"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001196 PROSITE:PS00475 Pfam:PF00828 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0016020 GO:GO:0006412
EMBL:AC011663 GO:GO:0003735 GO:GO:0022625 eggNOG:COG0200
HOGENOM:HOG000231263 KO:K02900 ProtClustDB:CLSN2682070
InterPro:IPR021131 SUPFAM:SSF52080 EMBL:X91959 EMBL:AY039519
EMBL:AY048228 EMBL:AY091706 EMBL:AY085573 EMBL:Z17767
IPI:IPI00548463 PIR:S71256 RefSeq:NP_177217.1 UniGene:At.24536
UniGene:At.72396 ProteinModelPortal:P49637 SMR:P49637 STRING:P49637
PaxDb:P49637 PRIDE:P49637 EnsemblPlants:AT1G70600.1 GeneID:843397
KEGG:ath:AT1G70600 TAIR:At1g70600 InParanoid:P49637 OMA:FCPTINL
PhylomeDB:P49637 Genevestigator:P49637 GermOnline:AT1G70600
Uniprot:P49637
Length = 146
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 44/70 (62%), Positives = 53/70 (75%)
Query: 67 NAGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLVSDQTREKY-KD 125
NAGGMHHHRI FDKYHPGYFGKVGMR +H +N +CPI+NLD+LW+LV + + K KD
Sbjct: 34 NAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFFCPIVNLDKLWSLVPEDVKAKSTKD 93
Query: 126 NKEGKAPIID 135
N P+ID
Sbjct: 94 N----VPLID 99
>UNIPROTKB|F1LZW1 [details] [associations]
symbol:F1LZW1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001196
PROSITE:PS00475 Pfam:PF00828 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR021131 SUPFAM:SSF52080 IPI:IPI00779755
Ensembl:ENSRNOT00000056160 Uniprot:F1LZW1
Length = 140
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 42/72 (58%), Positives = 52/72 (72%)
Query: 67 NAGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLVSDQTREKYKDN 126
NAGG HHHRIN DK HPG FGKV MR+ H+K+N +CP +NLD+L TLVS+Q R N
Sbjct: 29 NAGGKHHHRINSDKCHPGNFGKVVMRHVHLKRNQSFCPTVNLDKLGTLVSEQIRVNAAKN 88
Query: 127 KEGKAPIIDCVK 138
K AP+ID ++
Sbjct: 89 KTAAAPVIDAIR 100
>UNIPROTKB|F1M730 [details] [associations]
symbol:F1M730 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005840 "ribosome" evidence=IEA]
Pfam:PF00828 GO:GO:0005840 InterPro:IPR021131 SUPFAM:SSF52080
OMA:IHYHRIN IPI:IPI00782389 Ensembl:ENSRNOT00000060788
Uniprot:F1M730
Length = 119
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 40/72 (55%), Positives = 53/72 (73%)
Query: 67 NAGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLVSDQTREKYKDN 126
N G+H+HRINFDKYHP VGMR Y++K+N +CP +NLD+LWTLVS+QT+ +
Sbjct: 23 NGEGIHYHRINFDKYHP-----VGMRRYYMKRNKSFCPTVNLDKLWTLVSEQTQVNAAKH 77
Query: 127 KEGKAPIIDCVK 138
K G +PIID V+
Sbjct: 78 KTGASPIIDVVR 89
>ASPGD|ASPL0000039794 [details] [associations]
symbol:AN10416 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001196 PROSITE:PS00475 Pfam:PF00828
GO:GO:0006412 EMBL:BN001306 GO:GO:0005840 GO:GO:0003735
HOGENOM:HOG000231263 InterPro:IPR021131 SUPFAM:SSF52080 OMA:HHHRTNL
EnsemblFungi:CADANIAT00009591 Uniprot:C8VHC3
Length = 149
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 39/69 (56%), Positives = 47/69 (68%)
Query: 68 AGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLVSDQTREKY-KDN 126
AGG HHHR N DKYHPGYFGKVGMR +H + W P IN+D+LW+LV + R+ Y
Sbjct: 35 AGGQHHHRTNLDKYHPGYFGKVGMRYFHKTQQQFWKPTINVDKLWSLVPAEQRDAYISGQ 94
Query: 127 KEGKAPIID 135
K AP+ID
Sbjct: 95 KTDTAPVID 103
>UNIPROTKB|G4ML84 [details] [associations]
symbol:MGG_06721 "60S ribosomal protein L28" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001196 PROSITE:PS00475 Pfam:PF00828
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CM001231
GO:GO:0043581 KO:K02900 InterPro:IPR021131 SUPFAM:SSF52080
RefSeq:XP_003709432.1 ProteinModelPortal:G4ML84
EnsemblFungi:MGG_06721T0 GeneID:2684894 KEGG:mgr:MGG_06721
Uniprot:G4ML84
Length = 150
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 41/70 (58%), Positives = 48/70 (68%)
Query: 68 AGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLV-SDQTREKYKDN 126
AGG HHHR N DKYHPGYFGKVGMR++H N W PIIN+D+LW+LV +D+ E K
Sbjct: 35 AGGQHHHRTNLDKYHPGYFGKVGMRHFHHLHNHDWKPIINVDKLWSLVPADKQAEYLKAG 94
Query: 127 KEG-KAPIID 135
K P ID
Sbjct: 95 ANSDKVPQID 104
>UNIPROTKB|F1LVX4 [details] [associations]
symbol:F1LVX4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005840 "ribosome" evidence=IEA]
Pfam:PF00828 GO:GO:0005840 InterPro:IPR021131 SUPFAM:SSF52080
GeneTree:ENSGT00390000005534 IPI:IPI00766682
Ensembl:ENSRNOT00000058502 Uniprot:F1LVX4
Length = 122
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 37/73 (50%), Positives = 52/73 (71%)
Query: 67 NAGGMHHHRINFDKYHPGYFGKVGMRNYHIKKNAKWCPIINLDRLWTLVSDQTREKYKDN 126
NAGG+HHHRINF K HPGYF K+ MR+ H+K+N +C ++ +LWT S+QTR ++
Sbjct: 10 NAGGIHHHRINFGKCHPGYFRKIDMRHDHLKRNQSFCQVV---KLWTRDSEQTRVNAEEK 66
Query: 127 KEGKA-PIIDCVK 138
E +A PII+ V+
Sbjct: 67 TETEAAPIIEGVR 79
>UNIPROTKB|E9PJD9 [details] [associations]
symbol:RPL27A "60S ribosomal protein L27a" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR021131 SUPFAM:SSF52080 HGNC:HGNC:10329 EMBL:AC091053
IPI:IPI00980350 SMR:E9PJD9 Ensembl:ENST00000524496
Ensembl:ENST00000526562 Ensembl:ENST00000530022
Ensembl:ENST00000530913 Uniprot:E9PJD9
Length = 91
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 28/49 (57%), Positives = 38/49 (77%)
Query: 91 MRNYHIKKNAKWCPIINLDRLWTLVSDQTREKYKDNKEGKAPIIDCVKA 139
M++YH+K+N +CP +NLD+LWTLVS+QTR NK G APIID V++
Sbjct: 1 MKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 49
>UNIPROTKB|Q29333 [details] [associations]
symbol:RPL27A "60S ribosomal protein L27a" species:9823
"Sus scrofa" [GO:0005840 "ribosome" evidence=IEA] PROSITE:PS00475
Pfam:PF00828 GO:GO:0005840 eggNOG:COG0200 HOGENOM:HOG000231263
InterPro:IPR021131 SUPFAM:SSF52080 OrthoDB:EOG4CJVJC EMBL:F14739
STRING:Q29333 Uniprot:Q29333
Length = 54
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 20/21 (95%), Positives = 20/21 (95%)
Query: 67 NAGGMHHHRINFDKYHPGYFG 87
NAGGMHHHRINFDKYH GYFG
Sbjct: 34 NAGGMHHHRINFDKYHXGYFG 54
>TAIR|locus:2010406 [details] [associations]
symbol:AT1G12960 "AT1G12960" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
PROSITE:PS00475 Pfam:PF00828 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC012187 GO:GO:0022625
IPI:IPI00537959 PIR:E86263 RefSeq:NP_172756.1 UniGene:At.51592
ProteinModelPortal:Q9LPV3 SMR:Q9LPV3 STRING:Q9LPV3
EnsemblPlants:AT1G12960.1 GeneID:837854 KEGG:ath:AT1G12960
TAIR:At1g12960 eggNOG:COG0200 HOGENOM:HOG000231263
InParanoid:Q9LPV3 KO:K02900 OMA:TRNLREH PhylomeDB:Q9LPV3
ProtClustDB:CLSN2682070 Genevestigator:Q9LPV3 GermOnline:AT1G12960
InterPro:IPR021131 SUPFAM:SSF52080 Uniprot:Q9LPV3
Length = 104
Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 73 HHRINFDKYHPGYFGK--VGMRNYHIKKNAKWCPIINLDRLWTLV 115
H R + PG G VGMR +H +N +C I+NLD+LW++V
Sbjct: 19 HGRFGKHRKLPGSRGNAGVGMRYFHKLRNKFYCQIVNLDKLWSMV 63
>UNIPROTKB|E9PLX7 [details] [associations]
symbol:RPL27A "60S ribosomal protein L27a" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR001196 PROSITE:PS00475
Pfam:PF00828 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR021131 SUPFAM:SSF52080 HGNC:HGNC:10329 EMBL:AC091053
IPI:IPI00976934 ProteinModelPortal:E9PLX7 SMR:E9PLX7
Ensembl:ENST00000532359 ArrayExpress:E9PLX7 Bgee:E9PLX7
Uniprot:E9PLX7
Length = 113
Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
Identities = 19/43 (44%), Positives = 21/43 (48%)
Query: 39 KKTRKLXXXXXXXXXXXXXXXXXXXXXXNAGGMHHHRINFDKY 81
+KTRKL NAGG+HHHRINFDKY
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKY 48
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.426 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 144 122 0.00091 102 3 11 22 0.36 31
29 0.49 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 44
No. of states in DFA: 609 (65 KB)
Total size of DFA: 149 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.05u 0.12s 11.17t Elapsed: 00:00:00
Total cpu time: 11.05u 0.12s 11.17t Elapsed: 00:00:00
Start: Thu Aug 15 15:59:23 2013 End: Thu Aug 15 15:59:23 2013