BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13427
(268 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|156538291|ref|XP_001603481.1| PREDICTED: 28S ribosomal protein S2, mitochondrial [Nasonia
vitripennis]
Length = 256
Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 143/240 (59%), Positives = 174/240 (72%), Gaps = 20/240 (8%)
Query: 13 RLSTQTHYLFKKLSTVPNVDPLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDM 72
+LSTQT PN+ P ST S PL++ DYFQV L VKD+
Sbjct: 30 KLSTQTQ---------PNIQPEESTEVRLS-----------PLQHPDYFQVHKLFTVKDL 69
Query: 73 FDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLF 132
FDA+VH GHK G+LDE M+P+IYG R G +IFDLD +AELLR+ALNF AHIAY GI+LF
Sbjct: 70 FDARVHYGHKEGTLDEHMRPFIYGSRMGHLIFDLDHTAELLREALNFTAHIAYNQGIILF 129
Query: 133 VGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLE 192
+ ++ QN+ L+EKTA++C EFAHTR WR G+FTNS K F AVTRLPDL I +TL TV+
Sbjct: 130 LCRNPQNTHLVEKTAKECGEFAHTRRWRGGIFTNSTKEFGAVTRLPDLCIFLSTLNTVML 189
Query: 193 PNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
+ A+ AAKM IPTVGIVDSNCNPNLITYPVPGNDDTP A++ YC++FK AIL GK+A+
Sbjct: 190 EHRAVSNAAKMLIPTVGIVDSNCNPNLITYPVPGNDDTPCAVELYCKLFKQAILLGKEAR 249
>gi|91079290|ref|XP_972870.1| PREDICTED: similar to mitochondrial ribosomal protein S2 CG2937-PA
[Tribolium castaneum]
gi|270003534|gb|EEZ99981.1| hypothetical protein TcasGA2_TC002780 [Tribolium castaneum]
Length = 249
Score = 286 bits (731), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 131/206 (63%), Positives = 166/206 (80%)
Query: 53 NPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAEL 112
N L + DYF V +L V+D+F+A+VH GHK GSL+ERM PYIYG R G IIFDLD++A+
Sbjct: 44 NVLTHPDYFHVHDLFTVRDLFNARVHYGHKEGSLNERMLPYIYGSRLGHIIFDLDKTADY 103
Query: 113 LRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFR 172
LR ALNF AHIAYRDGI+LF+ + AQNS L+EKTAQ+C EFAHTRFWR G+FTNS K F
Sbjct: 104 LRRALNFAAHIAYRDGIILFLLRGAQNSHLVEKTAQECGEFAHTRFWRGGIFTNSTKQFG 163
Query: 173 AVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPS 232
AVTRLPDL I NTL VL + A+ ++AKM I T+GIVDSNC+PNL+TYPVPGNDD+P+
Sbjct: 164 AVTRLPDLCIFLNTLNNVLLQHTAVRDSAKMGIATIGIVDSNCDPNLLTYPVPGNDDSPA 223
Query: 233 AIQYYCQVFKTAILKGKKAKQDTLKL 258
+I+ YC++FK AIL+GK+ ++ ++L
Sbjct: 224 SIELYCKLFKAAILRGKERRKKDMQL 249
>gi|340721308|ref|XP_003399065.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Bombus
terrestris]
Length = 263
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/234 (57%), Positives = 177/234 (75%), Gaps = 7/234 (2%)
Query: 24 KLSTVPNVD-PLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHK 82
KLST P + + SNTES E NPL + D+F V ++ VKD+FDA+VH GHK
Sbjct: 31 KLSTKPELQQEIKDVSNTESL------EDINPLSHPDFFHVYDMFTVKDLFDARVHFGHK 84
Query: 83 IGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLL 142
GSL++ M+P+I+G R G +I DLDQ+AELLR ALNF AHIA R+GI+LF+ +++Q S L
Sbjct: 85 EGSLNDHMRPFIFGSRLGHLIIDLDQTAELLRQALNFTAHIASRNGIILFIARNSQISYL 144
Query: 143 IEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
+E+TA+ CQE+AHTRFW+ G FTN++ F AVTRLPDL I NT+ +V+E + A+ AAK
Sbjct: 145 VEETAKQCQEYAHTRFWKPGTFTNTKCEFGAVTRLPDLCIFLNTMQSVVEQHTAVIHAAK 204
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTL 256
MCIPT+GIVD+NC+P LITYPVPGNDDTP AI+ YC++FK A+++GKK K + L
Sbjct: 205 MCIPTIGIVDTNCDPKLITYPVPGNDDTPCAIELYCKLFKEAVMRGKKYKNEML 258
>gi|195342548|ref|XP_002037862.1| GM18067 [Drosophila sechellia]
gi|194132712|gb|EDW54280.1| GM18067 [Drosophila sechellia]
Length = 265
Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 129/211 (61%), Positives = 165/211 (78%), Gaps = 2/211 (0%)
Query: 55 LRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLR 114
L++ DYFQV NL V+D+F+A+VH GHK GSLDERM+PY++G R G +IFDLD++A LR
Sbjct: 46 LKHPDYFQVHNLFTVRDLFNARVHYGHKEGSLDERMRPYLFGSRLGHLIFDLDKTASHLR 105
Query: 115 DALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAV 174
DALNF AHIA+RDGI+LF ++A NS L+E+ AQ+ EF+HTRFWR G+FTN+ F AV
Sbjct: 106 DALNFAAHIAFRDGIILFFNRNAMNSHLVERKAQEAGEFSHTRFWRGGIFTNANVQFDAV 165
Query: 175 TRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAI 234
TRLPDL I NT V+ + A+ +AAKM IPT+GIVDSNCNPNLITYPVPGNDD+P+A+
Sbjct: 166 TRLPDLCIFLNTQNNVMAQHTAVRDAAKMAIPTIGIVDSNCNPNLITYPVPGNDDSPAAV 225
Query: 235 QYYCQVFKTAILKGKKAKQDTLKL--LSEKQ 263
+ YC +FK AIL+GK+ ++ L L L E Q
Sbjct: 226 ELYCNLFKEAILRGKRERRQLLGLPPLDESQ 256
>gi|28574694|ref|NP_523473.2| mitochondrial ribosomal protein S2 [Drosophila melanogaster]
gi|195576610|ref|XP_002078168.1| GD22685 [Drosophila simulans]
gi|21428678|gb|AAM49999.1| RE59650p [Drosophila melanogaster]
gi|28380249|gb|AAF50970.2| mitochondrial ribosomal protein S2 [Drosophila melanogaster]
gi|194190177|gb|EDX03753.1| GD22685 [Drosophila simulans]
gi|220949104|gb|ACL87095.1| mRpS2-PA [synthetic construct]
gi|220958178|gb|ACL91632.1| mRpS2-PA [synthetic construct]
Length = 264
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 128/211 (60%), Positives = 165/211 (78%), Gaps = 2/211 (0%)
Query: 55 LRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLR 114
L++ DYFQV NL V+D+F+A+VH GHK GSLD+RM+PY++G R G +IFDLD++A LR
Sbjct: 46 LKHPDYFQVHNLFTVRDLFNARVHYGHKEGSLDDRMRPYLFGSRLGHLIFDLDKTASHLR 105
Query: 115 DALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAV 174
DALNF AHIA+RDGI+LF ++A NS L+E+ AQ+ EF+HTRFWR G+FTN+ F AV
Sbjct: 106 DALNFAAHIAFRDGIILFFNRNAMNSHLVERKAQEAGEFSHTRFWRGGIFTNANVQFDAV 165
Query: 175 TRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAI 234
TRLPDL I NT V+ + A+ +AAKM IPT+GIVDSNCNPNLITYPVPGNDD+P+A+
Sbjct: 166 TRLPDLCIFLNTQNNVMAQHTAVRDAAKMAIPTIGIVDSNCNPNLITYPVPGNDDSPAAV 225
Query: 235 QYYCQVFKTAILKGKKAKQDTLKL--LSEKQ 263
+ YC +FK AIL+GK+ ++ L L L E Q
Sbjct: 226 ELYCNLFKEAILRGKRERRQLLGLPPLDESQ 256
>gi|195471357|ref|XP_002087971.1| GE14662 [Drosophila yakuba]
gi|194174072|gb|EDW87683.1| GE14662 [Drosophila yakuba]
Length = 264
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 125/204 (61%), Positives = 162/204 (79%)
Query: 55 LRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLR 114
L++ DYFQV NL V+D+F+A+VH GHK GSLD+RM+PY++G R G +IFDLD++A LR
Sbjct: 46 LKHPDYFQVHNLFTVRDLFNARVHYGHKEGSLDDRMRPYLFGSRLGHLIFDLDKTASHLR 105
Query: 115 DALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAV 174
DALNF AHIA+RDGI+LF ++A NS L+E+ AQ+ EF+HTRFWR G+FTN+ F AV
Sbjct: 106 DALNFAAHIAFRDGIILFFNRNAMNSHLVERKAQEAGEFSHTRFWRGGIFTNANVQFDAV 165
Query: 175 TRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAI 234
TRLPDL I NT V+ + A+ +AAKM IPT+GIVDSNCNPNLITYPVPGNDD+P+A+
Sbjct: 166 TRLPDLCIFLNTQNNVMAQHTAVRDAAKMAIPTIGIVDSNCNPNLITYPVPGNDDSPAAV 225
Query: 235 QYYCQVFKTAILKGKKAKQDTLKL 258
+ YC +FK AIL+GK+ ++ L L
Sbjct: 226 ELYCNLFKEAILRGKRERRQLLGL 249
>gi|195437396|ref|XP_002066626.1| GK24593 [Drosophila willistoni]
gi|194162711|gb|EDW77612.1| GK24593 [Drosophila willistoni]
Length = 275
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 130/210 (61%), Positives = 165/210 (78%), Gaps = 2/210 (0%)
Query: 55 LRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLR 114
L++ DYF V NL V+D+F+A+VH GHK GSLD+RM+PY+YG R G +IFDLD++A LR
Sbjct: 55 LKHPDYFNVHNLFTVRDLFNARVHYGHKEGSLDDRMRPYLYGNRLGHLIFDLDKTAAHLR 114
Query: 115 DALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAV 174
DALNFVAHIA+RDGI+LF ++A NS L+E+ A + EF+HTRFWR G+FTN+ F AV
Sbjct: 115 DALNFVAHIAFRDGIILFFNRNALNSHLVEQKALEAGEFSHTRFWRGGIFTNANVQFDAV 174
Query: 175 TRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAI 234
TRLPDL I NT VL + A+ +AAKM IPTVGIVDSNCNPNLITYPVPGNDD+P+A+
Sbjct: 175 TRLPDLCIFLNTQNNVLSQHTAVRDAAKMAIPTVGIVDSNCNPNLITYPVPGNDDSPAAV 234
Query: 235 QYYCQVFKTAILKGKKAKQDTLKL--LSEK 262
+ YC +FK AIL+GK+ +++ L L L EK
Sbjct: 235 ELYCNLFKEAILRGKRKRRELLGLPPLEEK 264
>gi|125985943|ref|XP_001356735.1| GA15531 [Drosophila pseudoobscura pseudoobscura]
gi|195148144|ref|XP_002015034.1| GL19496 [Drosophila persimilis]
gi|54645060|gb|EAL33800.1| GA15531 [Drosophila pseudoobscura pseudoobscura]
gi|194106987|gb|EDW29030.1| GL19496 [Drosophila persimilis]
Length = 278
Score = 280 bits (716), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 136/236 (57%), Positives = 175/236 (74%), Gaps = 9/236 (3%)
Query: 35 PSTSNTESKDTSQEPE-----VPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDER 89
P+ + T S D EPE L++ DYFQV NL V+D+F+A+VH GHK GSLD+R
Sbjct: 31 PAITTTVSADA--EPEDIAVIEQRILKHPDYFQVHNLFTVRDLFNARVHYGHKEGSLDDR 88
Query: 90 MKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQD 149
M+PY+YG R G +IFDLD++A LRDALNFVAHIA+RDGI+LF ++A N+ L+E+ A +
Sbjct: 89 MRPYLYGNRLGHLIFDLDKTAVHLRDALNFVAHIAFRDGIILFFNRNALNAHLVEQKALE 148
Query: 150 CQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVG 209
EF+HTRFWR G+FTN+ F AVTRLPDL I NT V+ + A+ +AAKM IPTVG
Sbjct: 149 AGEFSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNTQNNVMSQHTAVRDAAKMAIPTVG 208
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL--LSEKQ 263
IVDSNCNPNLITYPVPGNDD+P+A++ YC +FK AIL+GK+ +++ L L L E Q
Sbjct: 209 IVDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAILRGKRKRRELLGLPPLDETQ 264
>gi|194766019|ref|XP_001965122.1| GF21552 [Drosophila ananassae]
gi|190617732|gb|EDV33256.1| GF21552 [Drosophila ananassae]
Length = 265
Score = 279 bits (714), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 127/211 (60%), Positives = 165/211 (78%), Gaps = 2/211 (0%)
Query: 55 LRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLR 114
L++ DYFQV NL V+D+F+A+VH GHK GSLD+RM+PY++G R G +IFDLD++A LR
Sbjct: 46 LKHPDYFQVHNLFTVRDLFNARVHYGHKEGSLDDRMRPYLFGSRLGHLIFDLDKTASHLR 105
Query: 115 DALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAV 174
DALNF AHIA+RDGI++F ++A N+ L+E+ AQ+ EF+HTRFWR G+FTN+ F AV
Sbjct: 106 DALNFAAHIAFRDGIIVFFNRNALNAHLVEQKAQEAGEFSHTRFWRGGIFTNANVQFDAV 165
Query: 175 TRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAI 234
TRLPDL I NT V+ + A+ +AAKM IPT+GIVDSNCNPNLITYPVPGNDDTP+A+
Sbjct: 166 TRLPDLCIFLNTQNNVMAQHTAVRDAAKMAIPTIGIVDSNCNPNLITYPVPGNDDTPAAV 225
Query: 235 QYYCQVFKTAILKGKKAKQDTLKL--LSEKQ 263
+ YC +FK AIL+GK+ ++ L L L E Q
Sbjct: 226 ELYCNLFKEAILRGKRERRQLLGLPPLDESQ 256
>gi|350406965|ref|XP_003487938.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Bombus
impatiens]
Length = 254
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 132/234 (56%), Positives = 174/234 (74%), Gaps = 7/234 (2%)
Query: 24 KLSTVPNVD-PLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHK 82
KLST P V + SN ES E NPL + D+F V ++ VKD+FDA+VH GHK
Sbjct: 22 KLSTKPEVQQEIKDVSNIESL------EDINPLSHPDFFHVYDMFTVKDLFDARVHFGHK 75
Query: 83 IGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLL 142
GSL++ M+P+I+G R G +I DLDQ+AELLR ALNF AHIA R+GI+LF+ +++Q S L
Sbjct: 76 EGSLNDHMRPFIFGSRLGHLIIDLDQTAELLRQALNFTAHIASRNGIILFIARNSQISYL 135
Query: 143 IEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
+E+TA+ CQE+AHTR W+ G FTN+ F AVTRLPDL I NT+ +V+E + A+ AAK
Sbjct: 136 VEETAKQCQEYAHTRLWKPGTFTNAICEFGAVTRLPDLCIFLNTMQSVVEQHIAVIHAAK 195
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTL 256
MCIPT+GIVD+NC+P LITYP+PGNDDTP AI+ YC++FK AI++GKK + + L
Sbjct: 196 MCIPTIGIVDTNCDPKLITYPIPGNDDTPCAIELYCKLFKEAIMRGKKYRNEML 249
>gi|194856293|ref|XP_001968718.1| GG24347 [Drosophila erecta]
gi|190660585|gb|EDV57777.1| GG24347 [Drosophila erecta]
Length = 264
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 165/211 (78%), Gaps = 2/211 (0%)
Query: 55 LRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLR 114
L++ DYFQV NL V+D+F+A+VH GHK GSLD+RM+PY++G R G +IFDLD++A LR
Sbjct: 46 LKHPDYFQVHNLFTVRDLFNARVHYGHKEGSLDDRMRPYLFGSRLGHLIFDLDKTALHLR 105
Query: 115 DALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAV 174
DALNF AHIA+RDGI+LF ++A NS L+E+ AQ+ EF+HTRFWR G+FTN+ F AV
Sbjct: 106 DALNFAAHIAFRDGIILFFNRNAMNSHLVERKAQEAGEFSHTRFWRGGIFTNANVQFDAV 165
Query: 175 TRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAI 234
TRLPDL I NT V+ + A+ +AAKM IPT+G+VD+NCNPNLITYPVPGNDD+P+A+
Sbjct: 166 TRLPDLCIFLNTQNNVMTQHTAVRDAAKMAIPTIGVVDTNCNPNLITYPVPGNDDSPAAV 225
Query: 235 QYYCQVFKTAILKGKKAKQDTLKL--LSEKQ 263
+ YC +FK AIL+GK+ ++ L L L E Q
Sbjct: 226 ELYCNLFKEAILRGKRERRQLLGLPPLDESQ 256
>gi|195401303|ref|XP_002059253.1| GJ16130 [Drosophila virilis]
gi|194156127|gb|EDW71311.1| GJ16130 [Drosophila virilis]
Length = 271
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/233 (56%), Positives = 170/233 (72%), Gaps = 15/233 (6%)
Query: 46 SQEPEVPNP-------------LRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKP 92
+Q +VP P L++ DYFQV NL V+D+F+A+VH GHK GSLD+RM+P
Sbjct: 25 TQAAQVPTPAEPEDIDVIEQRILKHPDYFQVHNLFTVRDLFNARVHYGHKEGSLDDRMRP 84
Query: 93 YIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQE 152
Y+YG R G +IFDLD++A LRDALN VAHIA+RDGI+LF ++A N+ L+E+ A + E
Sbjct: 85 YLYGSRLGHLIFDLDKTAAHLRDALNVVAHIAFRDGIILFFNRNALNAHLVEQKAMEAGE 144
Query: 153 FAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVD 212
F+HTRFWR G+FTN+ F AVTRLPDL I NT VL + A+ +AAKM IPTVGIVD
Sbjct: 145 FSHTRFWRGGIFTNANVQFHAVTRLPDLCIFLNTQNNVLAQHTAVRDAAKMAIPTVGIVD 204
Query: 213 SNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL--LSEKQ 263
SNCNPNLITYPVPGNDD+P+A++ YC +FK AI +GK+ +++ L L L E Q
Sbjct: 205 SNCNPNLITYPVPGNDDSPAAVELYCNLFKEAIWRGKRKRRELLGLPPLDEAQ 257
>gi|195118572|ref|XP_002003810.1| GI21009 [Drosophila mojavensis]
gi|193914385|gb|EDW13252.1| GI21009 [Drosophila mojavensis]
Length = 271
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/211 (60%), Positives = 164/211 (77%), Gaps = 2/211 (0%)
Query: 55 LRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLR 114
L++ DYFQV NL V+D+F+A+VH GHK GSLD+RM+PYIYG R G +IFDLD++A LR
Sbjct: 47 LKHPDYFQVNNLFTVRDLFNARVHYGHKEGSLDDRMRPYIYGSRLGHLIFDLDKTASHLR 106
Query: 115 DALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAV 174
DALNF AHIA+RDGI+LF ++A N+ L+EK A + EF+HTRFWR G+FTN+ F AV
Sbjct: 107 DALNFAAHIAFRDGIILFFNRNAINAHLVEKKAMEAGEFSHTRFWRGGIFTNANVQFDAV 166
Query: 175 TRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAI 234
TRLPDL I NT V+ + A+ ++AKM IPT+GIVDSNCNPNLITYPVPGNDD+P+A+
Sbjct: 167 TRLPDLCIFLNTQNNVMAQHTAVRDSAKMAIPTIGIVDSNCNPNLITYPVPGNDDSPAAV 226
Query: 235 QYYCQVFKTAILKGKKAKQDTLKL--LSEKQ 263
+ YC +FK AI +GK+ +++ L L L E Q
Sbjct: 227 ELYCNLFKEAIWRGKRKRRELLGLPPLDETQ 257
>gi|321468436|gb|EFX79421.1| hypothetical protein DAPPUDRAFT_304832 [Daphnia pulex]
Length = 259
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/243 (54%), Positives = 173/243 (71%), Gaps = 1/243 (0%)
Query: 12 SRLSTQTHYLFKKLSTVPNVDPLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKD 71
R TQT + S N L TE K+ S+ E+ NPLR+ DYF VRNL ++KD
Sbjct: 14 GRCLTQTCSITSDTSHCQNATALKVNQPTELKE-SELKEITNPLRFPDYFGVRNLFRLKD 72
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+FDAKVH GHK G+L MKPYI+G R G IIFDLD++ ELL+DALNF AHIAY+ GI+L
Sbjct: 73 LFDAKVHYGHKDGTLHPNMKPYIFGSRLGHIIFDLDKTTELLQDALNFTAHIAYKGGIIL 132
Query: 132 FVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVL 191
FV Q++L +E A++ E+AH R W + TNSEK+++ VTRLPDL+I+ +TL +
Sbjct: 133 FVSHYPQHTLTVENAAKEAGEYAHAREWDFHLLTNSEKIYKGVTRLPDLIIMVSTLNPQM 192
Query: 192 EPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+ + A+ +AAKMCIPT+GIVDSN NPNLITYPVPGNDD+P+A+Q YC +F+ AIL GK
Sbjct: 193 QEHTAVRDAAKMCIPTIGIVDSNSNPNLITYPVPGNDDSPTAVQLYCNLFRDAILLGKSK 252
Query: 252 KQD 254
K +
Sbjct: 253 KSE 255
>gi|195051760|ref|XP_001993165.1| GH13663 [Drosophila grimshawi]
gi|193900224|gb|EDV99090.1| GH13663 [Drosophila grimshawi]
Length = 267
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 133/245 (54%), Positives = 178/245 (72%), Gaps = 7/245 (2%)
Query: 21 LFKKLSTVPNVDPLPST-SNTESKDTS-QEPE-----VPNPLRYHDYFQVRNLVKVKDMF 73
L K + +P L S +T+S T+ +EPE L++ DYFQV NL V+D+F
Sbjct: 2 LRKSFNNLPRFGQLFSRLQSTQSAATAVEEPEDIDVIEERILKHPDYFQVNNLFTVRDLF 61
Query: 74 DAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFV 133
+A+VH GHK GSLD+RM+PY+YG R G +IFDLD++A LR ALNF AHIA+RDGI+LF
Sbjct: 62 NARVHYGHKEGSLDDRMRPYLYGNRLGHLIFDLDKTATHLRQALNFTAHIAFRDGIILFF 121
Query: 134 GQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEP 193
++A N+LL+E+ A + E++HTRFWR G+FTN+ F AVTRLPDL I NT V+
Sbjct: 122 NRNALNALLVEQKAMEAGEYSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNTQNNVMAQ 181
Query: 194 NPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+ A+ +AAKM IPT+GIVDSNCNPNLITYPVPGNDD+P+A++ YC +FK AI +GK+ ++
Sbjct: 182 HTAVRDAAKMAIPTIGIVDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAIWRGKRKRR 241
Query: 254 DTLKL 258
+ L L
Sbjct: 242 EVLGL 246
>gi|322785450|gb|EFZ12121.1| hypothetical protein SINV_06769 [Solenopsis invicta]
Length = 266
Score = 276 bits (706), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 126/227 (55%), Positives = 168/227 (74%), Gaps = 5/227 (2%)
Query: 36 STSNTESKDTSQEPEVP-----NPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERM 90
S NTE D S PE +PL + D+FQV L VKD++DA+VH GHK SL+E M
Sbjct: 38 SQPNTEEADLSNVPESSEVTTLDPLIHPDFFQVHKLFTVKDLYDARVHYGHKETSLNEHM 97
Query: 91 KPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDC 150
+ +I+G R G +I DLDQ+AELLR ALNF AHIA+R GI+LF+ ++ Q + L++KTA++C
Sbjct: 98 ETFIFGSRLGHLIIDLDQTAELLRQALNFTAHIAFRGGIILFISRNPQVTHLVDKTAREC 157
Query: 151 QEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGI 210
+E++ TRFWR G+F NS F+A TRLPDL I TL TV+ + A+ AAKMCIP+VGI
Sbjct: 158 KEYSQTRFWRHGLFPNSRNQFKATTRLPDLCIFLGTLDTVMSEHKAVRHAAKMCIPSVGI 217
Query: 211 VDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLK 257
VD+NCNPNLITYPVPGNDD+P AI+ YC +FK AI++GK+A++ ++
Sbjct: 218 VDTNCNPNLITYPVPGNDDSPCAIELYCSLFKEAIMRGKRARERLMQ 264
>gi|383847444|ref|XP_003699364.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Megachile
rotundata]
Length = 260
Score = 276 bits (705), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 162/206 (78%)
Query: 53 NPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAEL 112
+PL + DYF V ++ VKD+F+A+VH GHK GSL++ MKP+I+G R G +I DLD++AEL
Sbjct: 50 DPLSHPDYFHVHDMFTVKDLFNARVHFGHKEGSLNDLMKPFIFGSRLGHLIIDLDKTAEL 109
Query: 113 LRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFR 172
LRDALNF AHIAYR GI+LF+ ++ Q S ++EKTA++C E+AHTR W+ G FTNS F
Sbjct: 110 LRDALNFTAHIAYRGGIILFIAKNPQISYIVEKTAKECNEYAHTRKWKLGTFTNSTAEFG 169
Query: 173 AVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPS 232
TRLPDL I T+ +V++ + A+ AAKM IPTVGIVD+NCNPNLITYPVPGNDDTP
Sbjct: 170 TTTRLPDLCIFLTTMESVIQQHVAVAHAAKMAIPTVGIVDTNCNPNLITYPVPGNDDTPC 229
Query: 233 AIQYYCQVFKTAILKGKKAKQDTLKL 258
I++YC++FK AI++GKK + ++L++
Sbjct: 230 TIEFYCKLFKEAIMRGKKRRNESLEI 255
>gi|307205969|gb|EFN84095.1| 28S ribosomal protein S2, mitochondrial [Harpegnathos saltator]
Length = 255
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 171/237 (72%)
Query: 26 STVPNVDPLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGS 85
+T P L + S K+ NPL + D+FQ+ L VKD+++A+VH GHK
Sbjct: 19 NTYPRQCQLTTQSQPNVKEVESLEITLNPLTHPDFFQMHTLFTVKDLYNARVHYGHKETL 78
Query: 86 LDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEK 145
L + M+ +I+G R G +I DLDQ+AELLR ALNF+AHIA+RDGI+LF+ ++ Q + L++K
Sbjct: 79 LHKNMETFIFGSRMGHLIIDLDQTAELLRQALNFIAHIAFRDGIILFISRNPQTTYLVDK 138
Query: 146 TAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
TA++C+EF+HTR+WR+G+F NS F+ +TRLPDL I NTL T + + + AAKMCI
Sbjct: 139 TAKECKEFSHTRYWRKGIFPNSTNQFKTITRLPDLCIFLNTLDTAMSEHTGVAHAAKMCI 198
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
P+VGIVD+NCNPNLITYP+PGNDD+ AI+ YC +FK AIL+GKKA++ +KL + +
Sbjct: 199 PSVGIVDTNCNPNLITYPIPGNDDSLCAIELYCSLFKEAILRGKKAREQLMKLANSR 255
>gi|380015787|ref|XP_003691877.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Apis
florea]
Length = 259
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 162/204 (79%)
Query: 53 NPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAEL 112
+PL + D+F V N+ +KD+FDAKVH GHK GSL++ M+P+I+G R G +I DLD+SAEL
Sbjct: 51 DPLSHPDFFHVYNMFTIKDLFDAKVHFGHKEGSLNDHMRPFIFGSRLGHLIIDLDKSAEL 110
Query: 113 LRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFR 172
LR ALNF AHIA++DGI+LF+ ++ Q S L+E TA++CQE+AHTR W G FTNS + F
Sbjct: 111 LRQALNFTAHIAFKDGIILFIAKNPQISYLVENTAKECQEYAHTRKWNLGTFTNSVQEFG 170
Query: 173 AVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPS 232
VTRLPDL I NT+ +V++ + A+ AAKMCIP++GIVD+NC+P LITYPVPGNDDTP
Sbjct: 171 IVTRLPDLCIFLNTMESVVKQHTAVVHAAKMCIPSIGIVDTNCDPKLITYPVPGNDDTPC 230
Query: 233 AIQYYCQVFKTAILKGKKAKQDTL 256
AI+ YC++FK AI+KGKK +++ L
Sbjct: 231 AIELYCKLFKNAIMKGKKYRKEML 254
>gi|66553073|ref|XP_395329.2| PREDICTED: 28S ribosomal protein S2, mitochondrial [Apis mellifera]
Length = 259
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 122/224 (54%), Positives = 172/224 (76%)
Query: 34 LPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPY 93
L +++ + + ++ + E +PL + D+F V N+ +KD+FDAKVH GHK GSL++ M+P+
Sbjct: 32 LSTSAEPKQEISNDDLEKIDPLNHPDFFHVYNMFTIKDLFDAKVHFGHKEGSLNDHMRPF 91
Query: 94 IYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEF 153
I+G R G +I DLD+SAELLR ALNF AHIA+++GI+LF+ ++ Q S L+E TA++CQE+
Sbjct: 92 IFGSRLGHLIIDLDKSAELLRQALNFTAHIAFKNGIILFIAKNPQISYLVENTAKECQEY 151
Query: 154 AHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDS 213
AHTR W G FTN+ + F VTRLPDL I NT+ +V++ + A+ AAKMCIP+VGIVD+
Sbjct: 152 AHTRKWNLGTFTNAVQEFGIVTRLPDLCIFLNTMESVVKQHTAVVHAAKMCIPSVGIVDT 211
Query: 214 NCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLK 257
NC+P LITYPVPGNDDTP AI+ YC++FK AI+KGKK + + L+
Sbjct: 212 NCDPKLITYPVPGNDDTPCAIELYCKLFKNAIIKGKKYRNEMLR 255
>gi|289741867|gb|ADD19681.1| mitochondrial ribosomal protein S2 [Glossina morsitans morsitans]
Length = 265
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 162/208 (77%)
Query: 55 LRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLR 114
++ DYF+V NL V+D+F+A+VH GHK GSLD+RM+P+IYG R G +IFDLD++A LR
Sbjct: 56 IKQADYFEVHNLFSVRDLFNARVHYGHKEGSLDDRMRPFIYGSRLGHLIFDLDKTASHLR 115
Query: 115 DALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAV 174
DALN AHIA+RDGI+ F ++A N+ ++EK A + EF++T+FWR G+FTN+ F AV
Sbjct: 116 DALNITAHIAFRDGIICFFNRNALNAHIVEKKAMEAGEFSYTKFWRGGIFTNANVQFGAV 175
Query: 175 TRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAI 234
TRLPDL I NT +L + A+ ++AKM IPT+GIVDSNCNPNLITYPVPGNDDTP AI
Sbjct: 176 TRLPDLCIFLNTQNNILAQHTAVRDSAKMAIPTIGIVDSNCNPNLITYPVPGNDDTPCAI 235
Query: 235 QYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+ YC +FK AIL+GK+ +++ L+ L+EK
Sbjct: 236 ELYCNLFKAAILRGKQKRREFLEPLNEK 263
>gi|332021375|gb|EGI61747.1| 28S ribosomal protein S2, mitochondrial [Acromyrmex echinatior]
Length = 235
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 124/220 (56%), Positives = 164/220 (74%), Gaps = 4/220 (1%)
Query: 42 SKDTSQEPEVP----NPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGV 97
S D S PE +PL + D+FQV L VKD++DA+VH GHK SL+E M+ +I+G
Sbjct: 11 SIDLSNVPESSEVTLDPLTHPDFFQVHKLFTVKDLYDARVHYGHKETSLNEHMETFIFGS 70
Query: 98 RQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTR 157
R G +I DLDQ+AELLR ALNF AHIA+R GI+LF+ ++ Q L++KTA++C+EF+ TR
Sbjct: 71 RLGHLIIDLDQTAELLRQALNFTAHIAFRGGIILFISRNPQVMHLVDKTAKECKEFSQTR 130
Query: 158 FWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNP 217
FWRQG+F NS F+A TRLPDL I +TL TV+ + A+ AKMCIP+VGIVD+NCNP
Sbjct: 131 FWRQGLFPNSRNQFKATTRLPDLCIFLSTLDTVMAEHVAVRHTAKMCIPSVGIVDTNCNP 190
Query: 218 NLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLK 257
NLITYPVPGNDD+ AIQ YC +FK AI++GK+A++ ++
Sbjct: 191 NLITYPVPGNDDSLCAIQLYCSLFKEAIMRGKRAREQMIQ 230
>gi|170056282|ref|XP_001863960.1| mitochondrial 28S ribosomal protein S2 [Culex quinquefasciatus]
gi|167876029|gb|EDS39412.1| mitochondrial 28S ribosomal protein S2 [Culex quinquefasciatus]
Length = 244
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 130/229 (56%), Positives = 161/229 (70%), Gaps = 9/229 (3%)
Query: 36 STSNTESKDTSQEPEVPNP--------LRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLD 87
S + S T PEV P L++ DYF V L V+D+F A VHLGHK G+L
Sbjct: 12 SAACRRSLSTLVAPEVGVPAADKASEILKHPDYFGVHRLFTVEDLFKANVHLGHKEGTLH 71
Query: 88 ERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTA 147
+ MK Y+YG R G + DLD++AE LR ALN AHIAYR GI+LF ++AQN ++EKTA
Sbjct: 72 DNMKGYLYGSRLGHCVIDLDKTAEYLRHALNVTAHIAYRGGIILFFNRTAQNGHIVEKTA 131
Query: 148 QDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPT 207
+C E++HTRFWR G+FTN+ F AVTRLPDL I NTL+ VL + A+ + AKM IPT
Sbjct: 132 MECGEYSHTRFWRGGVFTNANVQFGAVTRLPDLCIFLNTLSNVLTQHSAVKDCAKMAIPT 191
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK-KAKQDT 255
VGIVD+NCNPNLITYPVPGNDDTP+AI YC++FK+AIL GK K K+D
Sbjct: 192 VGIVDTNCNPNLITYPVPGNDDTPAAIALYCKLFKSAILLGKAKMKEDA 240
>gi|157119238|ref|XP_001653316.1| 30S ribosomal protein S2 (prokaryotic and organellar) [Aedes
aegypti]
gi|108875414|gb|EAT39639.1| AAEL008582-PA [Aedes aegypti]
Length = 239
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/214 (57%), Positives = 158/214 (73%), Gaps = 9/214 (4%)
Query: 55 LRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLR 114
L++ DYF V L V+D+F AK+HLGHK G+L MK Y++G R G I DLD++AE LR
Sbjct: 35 LKHPDYFGVHRLFTVEDLFKAKIHLGHKEGTLHNNMKGYLFGSRLGHCIIDLDKTAEYLR 94
Query: 115 DALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAV 174
ALN AH+AYR G++LF +SAQN ++EKTA +C E++HTRFWR G+FTN+ F AV
Sbjct: 95 LALNVTAHVAYRGGVILFFNRSAQNGHIVEKTAMECGEYSHTRFWRGGVFTNANVQFGAV 154
Query: 175 TRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAI 234
TRLPDL I NT +LE + A+ ++AKM IPT+GIVDSNCNPNLITYPVPGNDDTPSAI
Sbjct: 155 TRLPDLCIFLNTQNNILEMHTAVKDSAKMSIPTIGIVDSNCNPNLITYPVPGNDDTPSAI 214
Query: 235 QYYCQVFKTAILKGKKAKQDTLKLLSEKQEVQHN 268
+ YC++FK+A+L G KAK K++ QHN
Sbjct: 215 ELYCKLFKSAVLLG-KAKM--------KEDAQHN 239
>gi|427795193|gb|JAA63048.1| Putative mitochondrial ribosomal protein s2, partial [Rhipicephalus
pulchellus]
Length = 280
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 162/212 (76%), Gaps = 4/212 (1%)
Query: 53 NPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAEL 112
+PL++ DYF + ++ ++++FDA+VHLGHK G+L+E MKPY++G R G ++ DL+++ +
Sbjct: 54 DPLQHADYFGIGKILSMRELFDARVHLGHKEGTLNELMKPYLFGSRLGYLVIDLEKTFDH 113
Query: 113 LRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFR 172
L ALNFVAHIAYRDGI+LFV + Q + ++E+TA+ CQEFAH R+WR G+FTNS F
Sbjct: 114 LFRALNFVAHIAYRDGIILFVTRHQQTAHMVEETAKACQEFAHARWWRAGLFTNSTAQFG 173
Query: 173 AVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPS 232
VTRLPD VIL +TL +V E +PA+ E M IPTV IVD+NC+P LITYP+PGNDDTPS
Sbjct: 174 TVTRLPDTVILLSTLDSVFEEHPAVKECNNMLIPTVAIVDTNCDPRLITYPIPGNDDTPS 233
Query: 233 AIQYYCQVFKTAILKG----KKAKQDTLKLLS 260
AIQ YC +FKTAIL G KK +++ KL++
Sbjct: 234 AIQLYCNLFKTAILLGKERRKKDQEEAAKLIA 265
>gi|158300812|ref|XP_320639.4| AGAP011886-PA [Anopheles gambiae str. PEST]
gi|157013341|gb|EAA00165.4| AGAP011886-PA [Anopheles gambiae str. PEST]
Length = 211
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 120/209 (57%), Positives = 158/209 (75%), Gaps = 2/209 (0%)
Query: 55 LRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLR 114
L + DYF V L V+D+F A+VH GHK G+L++ MK Y+YG R G I DLD++ + LR
Sbjct: 5 LSHPDYFGVHKLFTVEDLFKARVHFGHKEGTLNDNMKGYLYGSRLGHCIIDLDKTVDYLR 64
Query: 115 DALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAV 174
ALN AHIAYRDGI+LF ++A N+ +E+TA++C EFAHTR+WR G+FTN++ F AV
Sbjct: 65 AALNVAAHIAYRDGIILFFNRNALNAHRVEQTAKECGEFAHTRYWRGGVFTNAKVQFGAV 124
Query: 175 TRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAI 234
TRLPDL I NT+ VL+ + A+ +AAKM IPT+GIVD+NCNPNLITYPVPGNDD+P+AI
Sbjct: 125 TRLPDLCIFFNTMNNVLDMHTAVRDAAKMNIPTIGIVDTNCNPNLITYPVPGNDDSPAAI 184
Query: 235 QYYCQVFKTAILKGKKAKQDTLKLLSEKQ 263
+ YC++FK AIL GK+ ++ L SE Q
Sbjct: 185 ELYCKLFKNAILLGKEKRK--AHLASEAQ 211
>gi|307174869|gb|EFN65147.1| 28S ribosomal protein S2, mitochondrial [Camponotus floridanus]
Length = 197
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 153/188 (81%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+ VKD++DA+VH GHKI S+++ M+ +I+G R +I DLDQ+AELLR ALNF+AH+A+
Sbjct: 1 MFTVKDLYDARVHYGHKITSMNQHMETFIFGSRLDHLIIDLDQTAELLRQALNFIAHVAF 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
RDGI+LF+ ++ Q + L++KTA++C+EF+ TR+WR G+F NS+ F+ +TRLPDL I +
Sbjct: 61 RDGIILFISRNPQTTYLVDKTAKECKEFSQTRYWRIGLFPNSKNQFKTMTRLPDLCIFLS 120
Query: 186 TLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAI 245
TL +VL +PA+ +AKMCIP+VGIVD+NCNPNLITYP+PGNDD+ AI+ YC +FK AI
Sbjct: 121 TLDSVLAEHPAVRHSAKMCIPSVGIVDTNCNPNLITYPIPGNDDSLCAIELYCSLFKEAI 180
Query: 246 LKGKKAKQ 253
L+GKKA++
Sbjct: 181 LRGKKARE 188
>gi|260828589|ref|XP_002609245.1| hypothetical protein BRAFLDRAFT_86845 [Branchiostoma floridae]
gi|229294601|gb|EEN65255.1| hypothetical protein BRAFLDRAFT_86845 [Branchiostoma floridae]
Length = 283
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 161/224 (71%)
Query: 41 ESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQG 100
E +++ E + PL++ D+F+V L +D+F A VH+GHK G+ D M PYI+G R G
Sbjct: 52 EKDESTMERILLEPLKHPDFFEVNKLFTQRDLFRANVHVGHKEGAWDRNMYPYIFGTRLG 111
Query: 101 QIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWR 160
I DLDQ+ ELL ALNF AH+AYR IVLF+ + Q + LIE TA+DC E+AHTR+W+
Sbjct: 112 VHIIDLDQTVELLTRALNFTAHMAYRKAIVLFISRHRQFTHLIENTAKDCGEYAHTRYWQ 171
Query: 161 QGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLI 220
GMFTN+ + RLP+LVI +TL V E + AI +AAK+ IPTVGIVD+NCNPNLI
Sbjct: 172 GGMFTNATLQYGEGVRLPELVIFLHTLNNVFESHVAIRDAAKLNIPTVGIVDTNCNPNLI 231
Query: 221 TYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQE 264
TYPVPGNDD+P A++ YC++FK AILKGK +++ K +++++E
Sbjct: 232 TYPVPGNDDSPEAVELYCRLFKEAILKGKAKREEIEKQIAKERE 275
>gi|260593696|ref|NP_536700.3| 28S ribosomal protein S2, mitochondrial isoform 1 [Mus musculus]
gi|24212377|sp|Q924T2.1|RT02_MOUSE RecName: Full=28S ribosomal protein S2, mitochondrial;
Short=MRP-S2; Short=S2mt
gi|15080678|dbj|BAB62530.1| mitochondrial ribosomal protein S2 [Mus musculus]
gi|26346080|dbj|BAC36691.1| unnamed protein product [Mus musculus]
gi|38051922|gb|AAH60503.1| Mitochondrial ribosomal protein S2 [Mus musculus]
gi|74139196|dbj|BAE38484.1| unnamed protein product [Mus musculus]
gi|74152224|dbj|BAE32396.1| unnamed protein product [Mus musculus]
Length = 291
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/221 (52%), Positives = 159/221 (71%)
Query: 33 PLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKP 92
P+P+ S + D Q + PL++ D+F V+ L VK +F+A+VHLGHK G M+P
Sbjct: 42 PVPAVSEPQDGDDFQSRILDTPLQHSDFFNVKELFSVKSLFEARVHLGHKAGCRHRFMEP 101
Query: 93 YIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQE 152
YI+G R GQ I DLDQ+A L+ ALNF AH+AYR GI+LFV ++ Q S LIE TAQ C E
Sbjct: 102 YIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYRKGIILFVSRNRQFSHLIETTAQACGE 161
Query: 153 FAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVD 212
+AHTR+++ G+ TN++ LF RLPDL+I +TL V EP+ A+ +AAKM IPTVGIVD
Sbjct: 162 YAHTRYFKGGLLTNAQLLFGPSVRLPDLIIFLHTLNNVFEPHVAVRDAAKMNIPTVGIVD 221
Query: 213 SNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+NCNP LITYP+PGNDD+P AIQ +C++F+T I + K+ ++
Sbjct: 222 TNCNPCLITYPIPGNDDSPQAIQLFCKLFRTTINRAKEKRR 262
>gi|148676435|gb|EDL08382.1| mitochondrial ribosomal protein S2, isoform CRA_a [Mus musculus]
Length = 337
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/221 (52%), Positives = 159/221 (71%)
Query: 33 PLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKP 92
P+P+ S + D Q + PL++ D+F V+ L VK +F+A+VHLGHK G M+P
Sbjct: 88 PVPAVSEPQDGDDFQSRILDTPLQHSDFFNVKELFSVKSLFEARVHLGHKAGCRHRFMEP 147
Query: 93 YIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQE 152
YI+G R GQ I DLDQ+A L+ ALNF AH+AYR GI+LFV ++ Q S LIE TAQ C E
Sbjct: 148 YIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYRKGIILFVSRNRQFSHLIETTAQACGE 207
Query: 153 FAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVD 212
+AHTR+++ G+ TN++ LF RLPDL+I +TL V EP+ A+ +AAKM IPTVGIVD
Sbjct: 208 YAHTRYFKGGLLTNAQLLFGPSVRLPDLIIFLHTLNNVFEPHVAVRDAAKMNIPTVGIVD 267
Query: 213 SNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+NCNP LITYP+PGNDD+P AIQ +C++F+T I + K+ ++
Sbjct: 268 TNCNPCLITYPIPGNDDSPQAIQLFCKLFRTTINRAKEKRR 308
>gi|26341776|dbj|BAC34550.1| unnamed protein product [Mus musculus]
Length = 291
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/221 (52%), Positives = 159/221 (71%)
Query: 33 PLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKP 92
P+P+ S + D Q + PL++ D+F V+ L VK +F+A+VHLGHK G M+P
Sbjct: 42 PVPAVSEPQDGDDFQSRILDKPLQHSDFFNVKELFSVKSLFEARVHLGHKAGCRHRFMEP 101
Query: 93 YIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQE 152
YI+G R GQ I DLDQ+A L+ ALNF AH+AYR GI+LFV ++ Q S LIE TAQ C E
Sbjct: 102 YIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYRKGIILFVSRNRQFSHLIETTAQACGE 161
Query: 153 FAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVD 212
+AHTR+++ G+ TN++ LF RLPDL+I +TL V EP+ A+ +AAKM IPTVGIVD
Sbjct: 162 YAHTRYFKGGLLTNAQLLFGPSVRLPDLIIFLHTLNNVFEPHVAVRDAAKMNIPTVGIVD 221
Query: 213 SNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+NCNP LITYP+PGNDD+P AIQ +C++F+T I + K+ ++
Sbjct: 222 TNCNPCLITYPIPGNDDSPQAIQLFCKLFRTTINRAKEKRR 262
>gi|346466089|gb|AEO32889.1| hypothetical protein [Amblyomma maculatum]
Length = 284
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 110/203 (54%), Positives = 157/203 (77%)
Query: 51 VPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSA 110
V +PL++ DYF + L+ V+++F+A+VHLGHK G L++ M+PY++G R G + DLD++
Sbjct: 55 VLDPLQHADYFGLGKLLSVRELFEARVHLGHKEGLLNDLMRPYLFGSRLGYHVIDLDKTL 114
Query: 111 ELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKL 170
+ L ALNF+AH+AYR+GI+LFV + Q + ++E+TA++ EFAHTR+WR G+FTNS
Sbjct: 115 QHLFCALNFIAHVAYRNGIILFVTRHQQTAHMVEETARESHEFAHTRWWRPGLFTNSTAQ 174
Query: 171 FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDT 230
F VTRLPD VIL +TL +V E + A+ E K+ IPTV I+D+NC+P LITYP+PGNDDT
Sbjct: 175 FGTVTRLPDTVILLSTLDSVFEEHLAVKECNKLLIPTVAIMDTNCDPRLITYPIPGNDDT 234
Query: 231 PSAIQYYCQVFKTAILKGKKAKQ 253
P+AIQ YC +FKTAIL+GK+ ++
Sbjct: 235 PAAIQLYCHLFKTAILRGKERRK 257
>gi|351702686|gb|EHB05605.1| 28S ribosomal protein S2, mitochondrial [Heterocephalus glaber]
Length = 258
Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 113/206 (54%), Positives = 153/206 (74%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
PLR+ D+F+V+ L VK +F+A VHLGHK G M+PYI+G R GQ I DL+Q+A L
Sbjct: 34 PLRHSDFFKVKELFSVKSLFNAHVHLGHKAGCRHRFMEPYIFGCRLGQDIIDLEQTASHL 93
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
+ ALNF+AH AYR+GI+LFV ++ Q S LIE AQDC E+AHTR+++ G+ TN+ LF
Sbjct: 94 QLALNFIAHTAYRNGIILFVSRNRQFSHLIESMAQDCGEYAHTRYFKGGLLTNAPLLFGP 153
Query: 174 VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
RLPDL+I +TL V EP+ AI +AAKM IPTVG+VD+NCNP LITYP+PGNDD+PS+
Sbjct: 154 TVRLPDLIIFVHTLNNVFEPHVAIRDAAKMNIPTVGVVDTNCNPCLITYPIPGNDDSPSS 213
Query: 234 IQYYCQVFKTAILKGKKAKQDTLKLL 259
+Q +C++F+T I + K+ ++ LL
Sbjct: 214 VQLFCRLFQTTITRAKEKRRQMEALL 239
>gi|440913251|gb|ELR62727.1| 28S ribosomal protein S2, mitochondrial, partial [Bos grunniens
mutus]
Length = 279
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 114/222 (51%), Positives = 158/222 (71%), Gaps = 1/222 (0%)
Query: 32 DPLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMK 91
DP P+ S D S + PL++ D+F V+ L V+ +F+A+VHLGHK G M+
Sbjct: 20 DPGPACSPPPRPDRSAR-ILSEPLKHSDFFNVKELFSVRSLFNARVHLGHKAGCRHRFME 78
Query: 92 PYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQ 151
PYI+G R GQ I DL+Q+A L+ ALNF AH+A+R GI+LFV ++ Q S LIE TA+ C
Sbjct: 79 PYIFGSRLGQDIIDLEQTATHLQLALNFTAHVAFRGGIILFVSRARQFSHLIESTARSCG 138
Query: 152 EFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIV 211
E+AHTR+++ G+ TN+ L A RLPDL+I +TL V EP+ A+ +AAKM IPTVG+V
Sbjct: 139 EYAHTRYFKGGLLTNAPLLLGARVRLPDLIIFLHTLNNVFEPHVAVRDAAKMSIPTVGVV 198
Query: 212 DSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
D+NCNP LITYPVPGNDD+P A+Q +CQ+F+TA+ + K+ ++
Sbjct: 199 DTNCNPCLITYPVPGNDDSPPAVQLFCQLFQTAVTRAKEKRR 240
>gi|157819459|ref|NP_001102046.1| 28S ribosomal protein S2, mitochondrial [Rattus norvegicus]
gi|149039193|gb|EDL93413.1| mitochondrial ribosomal protein S2 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 291
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 115/221 (52%), Positives = 158/221 (71%)
Query: 33 PLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKP 92
P+P+ S + D Q + PL++ D+F V+ L VK +F+A+VHLGHK G M+P
Sbjct: 42 PVPAVSEPQDGDDFQSRILDVPLQHSDFFNVKELFSVKSLFEARVHLGHKAGCRHRFMEP 101
Query: 93 YIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQE 152
YI+G R GQ I DLDQ+A L+ ALNF AH+AYR GI+LFV ++ Q S LIE TAQ C E
Sbjct: 102 YIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYRKGIILFVSRNRQFSHLIETTAQACGE 161
Query: 153 FAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVD 212
+AHTR+++ G+ TN++ LF RLPDL++ +TL V E + A+ +AAKM IPTVGIVD
Sbjct: 162 YAHTRYFKGGLLTNAQLLFGPTVRLPDLIVFLHTLNNVFESHVAVRDAAKMNIPTVGIVD 221
Query: 213 SNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+NCNP LITYP+PGNDD+P AIQ +C++F+T I + K+ ++
Sbjct: 222 TNCNPCLITYPIPGNDDSPQAIQLFCKLFRTTINRAKEKRR 262
>gi|53131467|emb|CAG31821.1| hypothetical protein RCJMB04_11n4 [Gallus gallus]
Length = 373
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 156/213 (73%), Gaps = 1/213 (0%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
PLR+ D+F+V+NL +KD+FDA+VHLGHK G + MKPYI+G R Q I DLDQ+ + L
Sbjct: 42 PLRHPDFFKVKNLFTLKDLFDARVHLGHKKGCRHQFMKPYIFGCRLDQDIIDLDQTMQHL 101
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
+ ALNF AH+AYR GI+LFV ++ Q L+E TA++C E+AHTR+W+ G+ TN+ F
Sbjct: 102 QLALNFTAHVAYRKGIILFVSRNRQFCHLVESTARECGEYAHTRYWQGGLLTNAHIQFGP 161
Query: 174 VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
RLPDL+I ++L V EP+ AI +AAKM IPTVG+VD+NCNP LITYP+PGNDD+P+A
Sbjct: 162 GIRLPDLLIFLSSLNNVFEPHVAIRDAAKMNIPTVGVVDTNCNPCLITYPIPGNDDSPTA 221
Query: 234 IQYYCQVFKTAILKGKKAKQDTLKLLSEKQEVQ 266
++ YC++FK I+ K K+ +++ E Q Q
Sbjct: 222 MELYCKLFKMTIIHAKN-KRKQIEVFQELQSRQ 253
>gi|311246761|ref|XP_003122327.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like isoform 1
[Sus scrofa]
Length = 289
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/249 (46%), Positives = 167/249 (67%), Gaps = 14/249 (5%)
Query: 24 KLSTVPNVDPLPS-----TSNTESKDTSQEPEVPN---------PLRYHDYFQVRNLVKV 69
+L VP P P+ T + + ++EPE+ N PL++ D+F ++ L V
Sbjct: 21 RLHLVPTATPGPAGPTGRTLGSNAAPAAREPELGNDLRDRILSEPLKHADFFNLKELFSV 80
Query: 70 KDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGI 129
+ +FDA+VHLGHK G M+PY++G R GQ I DL+Q+A L+ ALNF AH+AYR+GI
Sbjct: 81 RSLFDARVHLGHKAGCRHRFMEPYLFGSRLGQDIIDLEQTAAHLQLALNFTAHVAYREGI 140
Query: 130 VLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTT 189
+LFV + Q + LIE TA+DC E+AHTR+++ G+ TN+ L RLPDL+I +TL
Sbjct: 141 ILFVSRHRQFAHLIETTARDCGEYAHTRYFKGGLLTNAPLLLGPGVRLPDLIIFLHTLNN 200
Query: 190 VLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
V EP+ A+ +AAKM IPTVGIVD+NCNP LITYPVPGNDD+P A++ +C++F+ AI + K
Sbjct: 201 VFEPHVAVRDAAKMNIPTVGIVDTNCNPALITYPVPGNDDSPPAVRLFCRLFQVAISRAK 260
Query: 250 KAKQDTLKL 258
+ ++ L
Sbjct: 261 EKRRQVEAL 269
>gi|348570360|ref|XP_003470965.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Cavia
porcellus]
Length = 236
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/214 (52%), Positives = 155/214 (72%)
Query: 46 SQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFD 105
+Q + PLR+ D+F+V+ L VK +FDA+VHLGHK G M+PYI+G R Q I D
Sbjct: 4 AQRKLLDEPLRHSDFFRVKELFSVKSLFDARVHLGHKAGCRHRFMEPYIFGSRLDQDIID 63
Query: 106 LDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFT 165
L+Q+A L+ ALNF+AH+AYR GI+LFV ++ Q S LIE AQDC E+AHTR+++ G+ T
Sbjct: 64 LEQTASHLQLALNFIAHVAYRKGIILFVSRNRQFSHLIENMAQDCGEYAHTRYFKGGLLT 123
Query: 166 NSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVP 225
N+ LF RLPDL+I +TL V EP+ AI +AAKM IPTVG+VD+NCNP LITYP+P
Sbjct: 124 NAPLLFGPTVRLPDLIIFLHTLNNVFEPHVAIRDAAKMNIPTVGVVDTNCNPCLITYPIP 183
Query: 226 GNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLL 259
GNDD+P+++ +C++F+T I + K+ ++ LL
Sbjct: 184 GNDDSPASVHLFCRLFRTTINRAKEKRRQMEALL 217
>gi|354506193|ref|XP_003515149.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like, partial
[Cricetulus griseus]
Length = 287
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/233 (50%), Positives = 162/233 (69%), Gaps = 1/233 (0%)
Query: 34 LPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPY 93
+P S + D Q + PL++ D+F V+ L VK +F+A+VHLGHK G M+PY
Sbjct: 39 VPMVSEPQDGDDLQSRILDVPLQHSDFFNVKELFSVKSLFEARVHLGHKAGCRHRFMEPY 98
Query: 94 IYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEF 153
I+G R GQ I DL+Q+A L+ ALNF AH+AYR GI+LFV ++ Q LIE TA+DC E+
Sbjct: 99 IFGNRLGQDIIDLEQTALNLQLALNFTAHVAYRKGIILFVSRNRQFCHLIENTARDCGEY 158
Query: 154 AHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDS 213
AHTR+++ G+ TN++ LF RLPDL+I +TL V EP+ A+ +AAKM IPTVGIVD+
Sbjct: 159 AHTRYFKGGLLTNAQLLFGPTVRLPDLIIFMHTLNNVFEPHVAVRDAAKMNIPTVGIVDT 218
Query: 214 NCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEVQ 266
NCNP LITYP+PGNDD+P AI +C++F+TAI + K+ K+ ++ L Q Q
Sbjct: 219 NCNPCLITYPIPGNDDSPQAIHLFCKLFRTAITRAKE-KRRQMEALHRLQSSQ 270
>gi|417409309|gb|JAA51165.1| Putative 28s ribosomal protein s2 mitochondrial-like isoform 1,
partial [Desmodus rotundus]
Length = 282
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 117/227 (51%), Positives = 158/227 (69%), Gaps = 8/227 (3%)
Query: 35 PSTSNTESKDTS--QEPE------VPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSL 86
PS+ ES EPE + PL++ D+F V+ L V+ +FDA+VHLGHK G
Sbjct: 29 PSSRTLESAAAPALSEPEDLQDRILSEPLKHSDFFNVKELFSVRSLFDARVHLGHKAGCR 88
Query: 87 DERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKT 146
M+PYI+G R Q I DL+Q+A L+ ALNF+AH+AYR GI+LFVG++ Q S LIE T
Sbjct: 89 HRFMEPYIFGSRLDQDIIDLEQTAAHLQLALNFMAHVAYRKGIILFVGRNRQFSHLIENT 148
Query: 147 AQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
A+DC E+AHTR+++ G+ TN+ L RLPDL+I NTL V EP+ A+ +AAKM IP
Sbjct: 149 ARDCGEYAHTRYFKGGLLTNAPLLLGPGVRLPDLIIFLNTLNNVFEPHVAVRDAAKMNIP 208
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
TVG+VD+NCNP LITYPVPGNDD+P ++Q +C++F+T I + K +Q
Sbjct: 209 TVGVVDTNCNPCLITYPVPGNDDSPPSVQLFCRLFRTTINRAKAKRQ 255
>gi|344308234|ref|XP_003422783.1| PREDICTED: hypothetical protein LOC100658360 [Loxodonta africana]
Length = 656
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 157/221 (71%)
Query: 33 PLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKP 92
P P+ S E + + + PL++ D+F V+ L V +F+A+VHLGHK G M+P
Sbjct: 178 PAPTVSKLEDRSDFNDEIINEPLKHSDFFNVKELFSVTSLFNARVHLGHKAGCRHRFMEP 237
Query: 93 YIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQE 152
YI+G R GQ I DL+Q+A L+ ALNF+AH+AYR GI+LFV ++ Q + LIE TA+DC E
Sbjct: 238 YIFGNRLGQDIIDLEQTAAHLQLALNFMAHVAYRKGIILFVSRNRQFTHLIENTARDCGE 297
Query: 153 FAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVD 212
+AHTR+++ G+FTN+ LF RLPDL+I +TL + EP+ A+ +AAKM IPTVGIVD
Sbjct: 298 YAHTRYFKGGLFTNASLLFGPGVRLPDLIIFLHTLNNIFEPHVAVRDAAKMNIPTVGIVD 357
Query: 213 SNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+NCNP LITYP+PGNDD+P ++ +C +F+T I + K+ ++
Sbjct: 358 TNCNPCLITYPIPGNDDSPPSVHLFCSLFQTTITRAKEKRR 398
>gi|389610079|dbj|BAM18651.1| mitochondrial ribosomal protein S2 [Papilio xuthus]
Length = 218
Score = 243 bits (620), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 115/201 (57%), Positives = 143/201 (71%), Gaps = 4/201 (1%)
Query: 26 STVPNVDPLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGS 85
STV P NT+ P+ NPL + DYF V NL VKD+FDA+VH GHK GS
Sbjct: 21 STVAQTVPQKEPENTQES----VPKRSNPLEHPDYFHVHNLFTVKDLFDARVHFGHKEGS 76
Query: 86 LDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEK 145
L+E M PY+YG R G +IFDLD +A+ LR ALNF AHIAYR GI+ F ++A N+ L+E+
Sbjct: 77 LNEYMTPYLYGSRLGHLIFDLDITADHLRKALNFTAHIAYRGGIICFFNRNALNAHLVER 136
Query: 146 TAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
TAQ+C E+AHTRFWR G+FTN+ F A+TRLPDL I NT +L + A+ ++AKM I
Sbjct: 137 TAQECGEYAHTRFWRGGIFTNANHQFGAITRLPDLCIFLNTQNNILSQHTAVRDSAKMLI 196
Query: 206 PTVGIVDSNCNPNLITYPVPG 226
PT+GIVDSNCNPNL+TYPVPG
Sbjct: 197 PTIGIVDSNCNPNLVTYPVPG 217
>gi|7705805|ref|NP_057118.1| 28S ribosomal protein S2, mitochondrial [Homo sapiens]
gi|24212389|sp|Q9Y399.1|RT02_HUMAN RecName: Full=28S ribosomal protein S2, mitochondrial;
Short=MRP-S2; Short=S2mt
gi|4929651|gb|AAD34086.1|AF151849_1 CGI-91 protein [Homo sapiens]
gi|14124982|gb|AAH08017.1| Mitochondrial ribosomal protein S2 [Homo sapiens]
gi|15080676|dbj|BAB62529.1| mitochondrial ribosomal protein S2 [Homo sapiens]
gi|15341861|gb|AAH13108.1| Mitochondrial ribosomal protein S2 [Homo sapiens]
Length = 296
Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 155/215 (72%), Gaps = 2/215 (0%)
Query: 41 ESKDTS--QEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVR 98
ES+D++ + + PL++ D+F V+ L V+ +FDA+VHLGHK G M+PYI+G R
Sbjct: 51 ESEDSTDFNDKILNEPLKHSDFFNVKELFSVRSLFDARVHLGHKAGCRHRFMEPYIFGSR 110
Query: 99 QGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRF 158
I DL+Q+A L+ ALNF AH+AYR GI+LF+ ++ Q S LIE A+DC E+AHTR+
Sbjct: 111 LDHDIIDLEQTATHLQLALNFTAHMAYRKGIILFISRNRQFSYLIENMARDCGEYAHTRY 170
Query: 159 WRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPN 218
+R GM TN+ LF RLPDL+I +TL + EP+ A+ +AAKM IPTVGIVD+NCNP
Sbjct: 171 FRGGMLTNARLLFGPTVRLPDLIIFLHTLNNIFEPHVAVRDAAKMNIPTVGIVDTNCNPC 230
Query: 219 LITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
LITYPVPGNDD+P A+ YC++F+TAI + K+ +Q
Sbjct: 231 LITYPVPGNDDSPLAVHLYCRLFQTAITRAKEKRQ 265
>gi|73967792|ref|XP_850391.1| PREDICTED: 28S ribosomal protein S2, mitochondrial [Canis lupus
familiaris]
Length = 288
Score = 243 bits (619), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 115/230 (50%), Positives = 160/230 (69%), Gaps = 1/230 (0%)
Query: 34 LPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPY 93
+P+ E + PL++ D+F V+ L V+ +F+A+VHLGHK G M+PY
Sbjct: 45 IPAVGEPEGSADISHHILSEPLKHSDFFNVKELFSVRSLFNARVHLGHKAGCRHRFMEPY 104
Query: 94 IYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEF 153
I+G R GQ I DL+Q+A L+ ALNF AH+AYR GI+LFV ++ Q S LIE TAQDC E+
Sbjct: 105 IFGSRLGQDIIDLEQTAVHLQLALNFTAHVAYRKGIILFVSRNRQFSHLIETTAQDCGEY 164
Query: 154 AHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDS 213
AHTR+++ G+ TNS L ++ RLPDL+I +TL V EP+ A+ +AAKM IPTVGIVD+
Sbjct: 165 AHTRYFKGGLLTNSSLLLGSMVRLPDLIIFLHTLNNVFEPHVAVRDAAKMHIPTVGIVDT 224
Query: 214 NCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQ 263
NCNP LITYP+PGNDD+P A+ +C++F+T I + K+ K+ ++ L E Q
Sbjct: 225 NCNPCLITYPIPGNDDSPPAVHLFCRLFRTTINRAKQ-KRRQIEALYELQ 273
>gi|119608558|gb|EAW88152.1| mitochondrial ribosomal protein S2, isoform CRA_a [Homo sapiens]
gi|119608559|gb|EAW88153.1| mitochondrial ribosomal protein S2, isoform CRA_a [Homo sapiens]
Length = 319
Score = 243 bits (619), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 155/215 (72%), Gaps = 2/215 (0%)
Query: 41 ESKDTS--QEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVR 98
ES+D++ + + PL++ D+F V+ L V+ +FDA+VHLGHK G M+PYI+G R
Sbjct: 74 ESEDSTDFNDKILNEPLKHSDFFNVKELFSVRSLFDARVHLGHKAGCRHRFMEPYIFGSR 133
Query: 99 QGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRF 158
I DL+Q+A L+ ALNF AH+AYR GI+LF+ ++ Q S LIE A+DC E+AHTR+
Sbjct: 134 LDHDIIDLEQTATHLQLALNFTAHMAYRKGIILFISRNRQFSYLIENMARDCGEYAHTRY 193
Query: 159 WRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPN 218
+R GM TN+ LF RLPDL+I +TL + EP+ A+ +AAKM IPTVGIVD+NCNP
Sbjct: 194 FRGGMLTNARLLFGPTVRLPDLIIFLHTLNNIFEPHVAVRDAAKMNIPTVGIVDTNCNPC 253
Query: 219 LITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
LITYPVPGNDD+P A+ YC++F+TAI + K+ +Q
Sbjct: 254 LITYPVPGNDDSPLAVHLYCRLFQTAITRAKEKRQ 288
>gi|149642651|ref|NP_001092347.1| 28S ribosomal protein S2, mitochondrial [Bos taurus]
gi|189031800|sp|P82923.2|RT02_BOVIN RecName: Full=28S ribosomal protein S2, mitochondrial;
Short=MRP-S2; Short=S2mt
gi|148877364|gb|AAI46029.1| MRPS2 protein [Bos taurus]
gi|296481952|tpg|DAA24067.1| TPA: 28S ribosomal protein S2, mitochondrial [Bos taurus]
Length = 293
Score = 243 bits (619), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 150/200 (75%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
PL++ D+F V+ L V+ +F+A+VHLGHK G M+PYI+G R GQ I DL+Q+A L
Sbjct: 55 PLKHSDFFNVKELFSVRSLFNARVHLGHKAGCRHRFMEPYIFGSRLGQDIIDLEQTATHL 114
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
+ ALNF AH+A+R GI+LFV ++ Q S LIE TA+ C E+AHTR+++ G+ TN+ L A
Sbjct: 115 QLALNFTAHVAFRGGIILFVSRARQFSHLIESTARSCGEYAHTRYFKGGLLTNAPLLLGA 174
Query: 174 VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
RLPDL+I +TL V EP+ A+ +AAKM IPTVG+VD+NCNP LITYPVPGNDD+P A
Sbjct: 175 RVRLPDLIIFLHTLNNVFEPHVAVRDAAKMSIPTVGVVDTNCNPCLITYPVPGNDDSPPA 234
Query: 234 IQYYCQVFKTAILKGKKAKQ 253
+Q +CQ+F+TA+ + K+ ++
Sbjct: 235 VQLFCQLFQTAVTRAKEKRR 254
>gi|443696972|gb|ELT97562.1| hypothetical protein CAPTEDRAFT_21914 [Capitella teleta]
Length = 245
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/241 (49%), Positives = 164/241 (68%), Gaps = 7/241 (2%)
Query: 13 RLSTQT-HYLFKKLSTVPNVDPLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKD 71
RLS+Q+ YL ++ S + S T S + S + + NPL + DYF V+ L K D
Sbjct: 4 RLSSQSLRYLQRQCSLQSRL-----CSQTSSIEESTQTSI-NPLEHDDYFDVKRLTKKID 57
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+F+ +VHLGHK+G+ + M PYI+G R G I DLDQ+ EL+++ALNF+AH+AYRDGI+L
Sbjct: 58 LFNNRVHLGHKVGTRNPYMLPYIFGNRLGVDILDLDQTHELMKEALNFIAHVAYRDGIIL 117
Query: 132 FVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVL 191
F+ + L+EK A++C E++H R W G TNS F AVTRLPDL I +T TV
Sbjct: 118 FISRHLHTIPLVEKAAEECGEYSHCRQWMTGTLTNSSVKFGAVTRLPDLCIFLSTQDTVF 177
Query: 192 EPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
E + A+ EAAKM IP+V +VDS C+P LITYP+PGNDDTP A++ Y ++FK AILKGK+
Sbjct: 178 EQHAAVIEAAKMYIPSVAVVDSACDPRLITYPIPGNDDTPCAVELYLKLFKEAILKGKQQ 237
Query: 252 K 252
+
Sbjct: 238 R 238
>gi|193643449|ref|XP_001946401.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like
[Acyrthosiphon pisum]
Length = 264
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 148/202 (73%), Gaps = 4/202 (1%)
Query: 59 DYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALN 118
D F V+++V++K +F+A VH GH G+LD RMK Y+YG R G +I DL+ + LL+ ALN
Sbjct: 56 DAFDVKSMVRIKSLFEAGVHFGHTEGTLDNRMKQYLYGNRLGHLIIDLNHTKRLLQQALN 115
Query: 119 FVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLP 178
AHI+YR G++LF+ QS N L +E A++C EFAHTR+WR GMFTNS ++F++ TRLP
Sbjct: 116 VTAHISYRGGVILFLCQSPLNCLTVENCAKECGEFAHTRYWRDGMFTNSSRIFKSETRLP 175
Query: 179 DLVILTNTLTTVLEPNPA----IGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAI 234
DL I+ NTL++ + N + +AAKM IPT+ IVD++ NPN++TYP+PGNDDTPSAI
Sbjct: 176 DLCIVLNTLSSTSKNNSGQHSVLSDAAKMLIPTIAIVDTDANPNIVTYPIPGNDDTPSAI 235
Query: 235 QYYCQVFKTAILKGKKAKQDTL 256
YC +FK IL+ KK +++ L
Sbjct: 236 NLYCDLFKNVILRAKKVRKEIL 257
>gi|260593698|ref|NP_001159503.2| 28S ribosomal protein S2, mitochondrial isoform 2 [Mus musculus]
Length = 272
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 112/200 (56%), Positives = 150/200 (75%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
PL++ D+F V+ L VK +F+A+VHLGHK G M+PYI+G R GQ I DLDQ+A L
Sbjct: 44 PLQHSDFFNVKELFSVKSLFEARVHLGHKAGCRHRFMEPYIFGNRLGQDIIDLDQTALNL 103
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
+ ALNF AH+AYR GI+LFV ++ Q S LIE TAQ C E+AHTR+++ G+ TN++ LF
Sbjct: 104 QLALNFTAHVAYRKGIILFVSRNRQFSHLIETTAQACGEYAHTRYFKGGLLTNAQLLFGP 163
Query: 174 VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
RLPDL+I +TL V EP+ A+ +AAKM IPTVGIVD+NCNP LITYP+PGNDD+P A
Sbjct: 164 SVRLPDLIIFLHTLNNVFEPHVAVRDAAKMNIPTVGIVDTNCNPCLITYPIPGNDDSPQA 223
Query: 234 IQYYCQVFKTAILKGKKAKQ 253
IQ +C++F+T I + K+ ++
Sbjct: 224 IQLFCKLFRTTINRAKEKRR 243
>gi|301792270|ref|XP_002931102.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Ailuropoda
melanoleuca]
Length = 283
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 112/224 (50%), Positives = 157/224 (70%)
Query: 35 PSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYI 94
P+ S E + + PL++ D+F V+ L V+ +FDA+VHLGHK G M+PYI
Sbjct: 36 PAVSEPEGSTDVSDKILSEPLKHSDFFNVKELFSVRSLFDARVHLGHKAGCRHRFMEPYI 95
Query: 95 YGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFA 154
+G R GQ I DL+Q+A L+ ALNF AH+AYR GI+LFV +S Q S LIE TA+ C E+A
Sbjct: 96 FGSRLGQDIIDLEQTATHLQLALNFTAHVAYRGGIILFVSRSRQFSHLIETTARSCGEYA 155
Query: 155 HTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSN 214
HTR+++ G+ TN+ L + RLPDL+I +TL V EP+ A+ +AAKM IPTVG+VD+N
Sbjct: 156 HTRYFKGGLLTNAPLLLGPMVRLPDLIIFLHTLNNVFEPHVAVRDAAKMHIPTVGVVDTN 215
Query: 215 CNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
CNP LITYPVPGNDD+P +++ +C++F+TAI + K+ ++ L
Sbjct: 216 CNPCLITYPVPGNDDSPPSVRLFCRLFQTAINRAKQKRRQVEAL 259
>gi|395844557|ref|XP_003795026.1| PREDICTED: 28S ribosomal protein S2, mitochondrial [Otolemur
garnettii]
Length = 336
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 157/215 (73%), Gaps = 2/215 (0%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
PL++ D+F+V+ L V+ +FDA+VHLGHK G M+PYI+G R Q I DL+Q+A L
Sbjct: 109 PLKHSDFFRVKELFSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDQDIIDLEQTAVHL 168
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
+ ALNF AH+AYR GI+LFV ++ Q S LIE TA+DC E+AHTR+++ G+ TN+ LF
Sbjct: 169 QLALNFTAHVAYRKGIILFVSRNRQFSHLIENTARDCGEYAHTRYFKGGLLTNAPLLFGP 228
Query: 174 VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
RLPDL+I +TL V EP+ A+ +AAKM IPTVGIVD+NCNP LITYP+P NDD+P A
Sbjct: 229 TVRLPDLIIFLHTLNNVFEPHVAVRDAAKMNIPTVGIVDTNCNPCLITYPIPANDDSPPA 288
Query: 234 IQYYCQVFKTAI--LKGKKAKQDTLKLLSEKQEVQ 266
+Q +C++F+TAI K K+++ + L L +QE +
Sbjct: 289 VQLFCRLFRTAITRAKDKRSQVEALYRLQGQQEAK 323
>gi|326930483|ref|XP_003211376.1| PREDICTED: hypothetical protein LOC100545851 [Meleagris gallopavo]
Length = 1577
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 106/200 (53%), Positives = 149/200 (74%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
PLR+ D+F V+ L +KD+FDA+VHLGHK G + M+PYI+G R Q I DLDQ+ + L
Sbjct: 1352 PLRHPDFFNVKELFSLKDLFDARVHLGHKKGCRHQFMEPYIFGCRLDQDIIDLDQTMQHL 1411
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
+ ALNF AH+AYR GI+LFV ++ Q L+E TA++C E+AHTR+W+ G+ TN+ F
Sbjct: 1412 QLALNFTAHVAYRKGIILFVSRNRQFCHLVESTARECGEYAHTRYWQGGLLTNAHIQFGP 1471
Query: 174 VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
RLPDL+I ++L V EP+ AI +AAKM IPTVG+VD+NCNP LITYP+PGNDD+P++
Sbjct: 1472 GIRLPDLLIFLSSLNNVFEPHVAIRDAAKMNIPTVGVVDTNCNPCLITYPIPGNDDSPTS 1531
Query: 234 IQYYCQVFKTAILKGKKAKQ 253
++ YC++FK I++ K ++
Sbjct: 1532 MELYCKLFKMTIIRAKNKRK 1551
>gi|431898955|gb|ELK07325.1| 28S ribosomal protein S2, mitochondrial [Pteropus alecto]
Length = 281
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 113/222 (50%), Positives = 158/222 (71%), Gaps = 2/222 (0%)
Query: 47 QEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDL 106
Q+ + PL++ D+F V+ L V+ +FDA+VHLGHK G M+PYI+G R I DL
Sbjct: 24 QDRILSEPLKHSDFFSVKELFSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLEHDIIDL 83
Query: 107 DQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN 166
+Q+A L+ ALNF AH+AYR GI+LFVG++ Q S LIE TA+ C E+AHTR+++ G+ TN
Sbjct: 84 EQTAAHLQLALNFTAHVAYRKGIILFVGRNRQFSHLIESTARACGEYAHTRYFKGGLLTN 143
Query: 167 SEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPG 226
+ L RLPDL+I +TL V EP+ A+ +AAKM IPTVGIVD+NCNP LITYPVPG
Sbjct: 144 APLLLGPSVRLPDLIIFLHTLNNVFEPHVAVRDAAKMSIPTVGIVDTNCNPCLITYPVPG 203
Query: 227 NDDTPSAIQYYCQVFKTAILKGKKAKQ--DTLKLLSEKQEVQ 266
NDD+P ++Q +C++F+TAI + K+ ++ + L L E+ E +
Sbjct: 204 NDDSPPSVQLFCRLFQTAICRAKEKRRQVEALYRLQEQAEAR 245
>gi|332833303|ref|XP_520354.3| PREDICTED: 28S ribosomal protein S2, mitochondrial isoform 3 [Pan
troglodytes]
Length = 319
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/215 (51%), Positives = 155/215 (72%), Gaps = 2/215 (0%)
Query: 41 ESKDTS--QEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVR 98
ES+D++ + + PL++ D+F V+ L V+ +FDA+VHLGHK G M+PYI+G R
Sbjct: 74 ESEDSTDFNDKILNEPLKHSDFFNVKELFSVRSLFDARVHLGHKAGCRHRFMEPYIFGSR 133
Query: 99 QGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRF 158
I DL+Q+A L+ ALNF AH+AYR GI+LF+ ++ Q S LIE A+DC E+AHTR+
Sbjct: 134 LDHDIIDLEQTATRLQLALNFTAHMAYRKGIILFISRNRQFSYLIENMARDCGEYAHTRY 193
Query: 159 WRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPN 218
++ GM TN+ LF RLPDL+I +TL + EP+ A+ +AAKM IPTVGIVD+NCNP
Sbjct: 194 FKGGMLTNARLLFGPTVRLPDLIIFLHTLNNIFEPHVAVRDAAKMNIPTVGIVDTNCNPC 253
Query: 219 LITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
LITYPVPGNDD+P A+ YC++F+TAI + K+ ++
Sbjct: 254 LITYPVPGNDDSPLAVHLYCRLFQTAITRAKEKRR 288
>gi|355704429|gb|AES02224.1| mitochondrial ribosomal protein S2 [Mustela putorius furo]
Length = 261
Score = 240 bits (612), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 111/215 (51%), Positives = 154/215 (71%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
PL++ D+F ++ L V+ +FDA+VHLGHK G M+PYI+G R GQ I DL+Q+A L
Sbjct: 35 PLKHSDFFNLKELFSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLGQDIIDLEQTAVHL 94
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
+ ALNF AH+AYR GI+LF+G++ Q S LIE TA+DC E+AHTR+++ G+ TN+ L
Sbjct: 95 QLALNFTAHVAYRKGIILFMGRNRQFSHLIETTARDCGEYAHTRYFKGGLLTNAPLLLGP 154
Query: 174 VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
RLPDL+I +TL V EP+ A+ +AAKM IPTVGIVD+NCNP LITYPVPGNDD+P A
Sbjct: 155 GVRLPDLIIFLHTLNNVFEPHVAVRDAAKMHIPTVGIVDTNCNPCLITYPVPGNDDSPPA 214
Query: 234 IQYYCQVFKTAILKGKKAKQDTLKLLSEKQEVQHN 268
+Q +C++F+T I + K+ ++ L + V+
Sbjct: 215 VQLFCRLFQTTIHRAKEKRRQMEALYRLQGPVEQG 249
>gi|410294668|gb|JAA25934.1| mitochondrial ribosomal protein S2 [Pan troglodytes]
Length = 319
Score = 240 bits (612), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 156/220 (70%), Gaps = 2/220 (0%)
Query: 41 ESKDTS--QEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVR 98
ES+D++ + + PL++ D+F V+ L V+ +FDA+VHLGHK G M+PYI+G R
Sbjct: 74 ESEDSTDFNDKILNEPLKHSDFFNVKELFSVRSLFDARVHLGHKAGCRHRFMEPYIFGSR 133
Query: 99 QGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRF 158
I DL+Q+A L+ ALNF AH+AYR GI+LF+ ++ Q S LIE A+DC E+AHTR+
Sbjct: 134 LDHDIIDLEQTATHLQLALNFTAHMAYRKGIILFISRNRQFSYLIENMARDCGEYAHTRY 193
Query: 159 WRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPN 218
++ GM TN+ LF RLPDL+I +TL + EP+ A+ +AAKM IPTVGIVD+NCNP
Sbjct: 194 FKGGMLTNARLLFGPTVRLPDLIIFLHTLNNIFEPHVAVRDAAKMNIPTVGIVDTNCNPC 253
Query: 219 LITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
LITYPVPGNDD+P A+ YC++F+TAI + K+ ++ L
Sbjct: 254 LITYPVPGNDDSPLAVHLYCRLFQTAITRAKEKRRQVEAL 293
>gi|410215324|gb|JAA04881.1| mitochondrial ribosomal protein S2 [Pan troglodytes]
gi|410263786|gb|JAA19859.1| mitochondrial ribosomal protein S2 [Pan troglodytes]
gi|410334427|gb|JAA36160.1| mitochondrial ribosomal protein S2 [Pan troglodytes]
Length = 296
Score = 240 bits (612), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 111/215 (51%), Positives = 155/215 (72%), Gaps = 2/215 (0%)
Query: 41 ESKDTS--QEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVR 98
ES+D++ + + PL++ D+F V+ L V+ +FDA+VHLGHK G M+PYI+G R
Sbjct: 51 ESEDSTDFNDKILNEPLKHSDFFSVKELFSVRSLFDARVHLGHKAGCRHRFMEPYIFGSR 110
Query: 99 QGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRF 158
I DL+Q+A L+ ALNF AH+AYR GI+LF+ ++ Q S LIE A+DC E+AHTR+
Sbjct: 111 LDHDIIDLEQTATHLQLALNFTAHMAYRKGIILFISRNRQFSYLIENMARDCGEYAHTRY 170
Query: 159 WRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPN 218
++ GM TN+ LF RLPDL+I +TL + EP+ A+ +AAKM IPTVGIVD+NCNP
Sbjct: 171 FKGGMLTNARLLFGPTVRLPDLIIFLHTLNNIFEPHVAVRDAAKMNIPTVGIVDTNCNPC 230
Query: 219 LITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
LITYPVPGNDD+P A+ YC++F+TAI + K+ ++
Sbjct: 231 LITYPVPGNDDSPLAVHLYCRLFQTAITRAKEKRR 265
>gi|397492139|ref|XP_003816986.1| PREDICTED: 28S ribosomal protein S2, mitochondrial [Pan paniscus]
Length = 319
Score = 239 bits (611), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 156/220 (70%), Gaps = 2/220 (0%)
Query: 41 ESKDTS--QEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVR 98
ES+D++ + + PL++ D+F V+ L V+ +FDA+VHLGHK G M+PYI+G R
Sbjct: 74 ESEDSTDFNDKILNEPLKHSDFFNVKELFSVRSLFDARVHLGHKAGCRHRFMEPYIFGSR 133
Query: 99 QGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRF 158
I DL+Q+A L+ ALNF AH+AYR GI+LF+ ++ Q S LIE A+DC E+AHTR+
Sbjct: 134 LDHDIIDLEQTATHLQLALNFTAHMAYRKGIILFISRNRQFSYLIENMARDCGEYAHTRY 193
Query: 159 WRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPN 218
++ GM TN+ LF RLPDL+I +TL + EP+ A+ +AAKM IPTVGIVD+NCNP
Sbjct: 194 FKGGMLTNARLLFGPTVRLPDLIIFLHTLNNIFEPHVAVRDAAKMNIPTVGIVDTNCNPC 253
Query: 219 LITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
LITYPVPGNDD+P A+ YC++F+TAI + K+ ++ L
Sbjct: 254 LITYPVPGNDDSPLAVHLYCRLFQTAITRAKEKRRQVEAL 293
>gi|403301607|ref|XP_003941478.1| PREDICTED: 28S ribosomal protein S2, mitochondrial [Saimiri
boliviensis boliviensis]
Length = 331
Score = 239 bits (611), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 112/224 (50%), Positives = 154/224 (68%)
Query: 35 PSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYI 94
P+ E Q+ + PL++ D+F V+ L V+ +FDA+VHLGHK G M+PYI
Sbjct: 82 PAIGEPEDGSDLQDKILNEPLKHSDFFNVKELFSVRSLFDARVHLGHKAGCRHRFMEPYI 141
Query: 95 YGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFA 154
+G R Q I DL+Q+A L+ ALNF AH+AYR GI+LF+ ++ Q S LIE A+DC E+A
Sbjct: 142 FGCRLDQDIIDLEQTATHLQLALNFTAHMAYRKGIILFISRNRQFSYLIENLARDCGEYA 201
Query: 155 HTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSN 214
HTR++ G+ TN+ LF RLPDL+I +TL V EP+ A+ +AAKM IPTVGIVD+N
Sbjct: 202 HTRYFTGGLLTNAPLLFGPGVRLPDLIIFLHTLNNVFEPHIAVRDAAKMNIPTVGIVDTN 261
Query: 215 CNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
CNP L+TYPVPGNDD+P A+ YC++F+TAI + K+ ++ L
Sbjct: 262 CNPCLVTYPVPGNDDSPPAVHLYCRLFRTAITRAKEKRRQVEAL 305
>gi|441623322|ref|XP_003279679.2| PREDICTED: 28S ribosomal protein S2, mitochondrial [Nomascus
leucogenys]
Length = 319
Score = 239 bits (610), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 108/205 (52%), Positives = 149/205 (72%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
PL++ D+F V+ L V+ +FDA+VHLGHK G M+PYI+G R I DL+Q+A L
Sbjct: 89 PLKHSDFFNVKELFSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDHDIIDLEQTATHL 148
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
+ ALNF AH+AYR GI+LF+ ++ Q S LIE TA+DC E+AHTR+++ G+ TN+ LF
Sbjct: 149 QLALNFTAHVAYRKGIILFISRNRQFSYLIENTARDCGEYAHTRYFKGGLLTNAPLLFGP 208
Query: 174 VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
RLPDL+I +TL+ + EP+ A+ +AAKM IPTVGIVD+NCNP LITYPVPGNDD+P A
Sbjct: 209 TVRLPDLIIFLHTLSNIFEPHVAVRDAAKMNIPTVGIVDTNCNPCLITYPVPGNDDSPLA 268
Query: 234 IQYYCQVFKTAILKGKKAKQDTLKL 258
+ YC++F+T I + K+ ++ L
Sbjct: 269 VHLYCRLFRTVITRAKEKRRQVEAL 293
>gi|355766323|gb|EHH62510.1| hypothetical protein EGM_20873, partial [Macaca fascicularis]
Length = 275
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 110/213 (51%), Positives = 154/213 (72%), Gaps = 2/213 (0%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
PL++ D+F V+ L V+ +FDA+VHLGHK G M+PYI+G R Q I DL+Q+A L
Sbjct: 45 PLKHSDFFNVKELFSVRSLFDARVHLGHKAGCRHRFMEPYIFGNRLDQDIIDLEQTAAHL 104
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
+ ALNF AH+AYR GI+LF+ ++ Q S LIE TA+ C E+AHTR+++ G+ TN+ LF
Sbjct: 105 QLALNFTAHVAYRKGIILFISRNRQFSYLIENTARHCGEYAHTRYFKGGLLTNAPLLFGP 164
Query: 174 VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
RLPDL+I +TL T+ EP+ A+ +AAKM IPTVGIVD+NCNP LITYP+PGNDD+P A
Sbjct: 165 AVRLPDLIIFLHTLNTIFEPHVAVRDAAKMNIPTVGIVDTNCNPCLITYPIPGNDDSPPA 224
Query: 234 IQYYCQVFKTAILKGKKAKQ--DTLKLLSEKQE 264
+ YC++F+T I + K+ ++ + L L ++E
Sbjct: 225 VHLYCRLFQTTITRAKEKRRQVEALYRLQAQKE 257
>gi|355567346|gb|EHH23687.1| hypothetical protein EGK_07212, partial [Macaca mulatta]
Length = 281
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 110/213 (51%), Positives = 154/213 (72%), Gaps = 2/213 (0%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
PL++ D+F V+ L V+ +FDA+VHLGHK G M+PYI+G R Q I DL+Q+A L
Sbjct: 51 PLKHSDFFNVKELFSVRSLFDARVHLGHKAGCRHRFMEPYIFGNRLDQDIIDLEQTAAHL 110
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
+ ALNF AH+AYR GI+LF+ ++ Q S LIE TA+ C E+AHTR+++ G+ TN+ LF
Sbjct: 111 QLALNFTAHVAYRKGIILFISRNRQFSYLIENTARHCGEYAHTRYFKGGLLTNAPLLFGP 170
Query: 174 VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
RLPDL+I +TL T+ EP+ A+ +AAKM IPTVGIVD+NCNP LITYP+PGNDD+P A
Sbjct: 171 AVRLPDLIIFLHTLNTIFEPHVAVRDAAKMNIPTVGIVDTNCNPCLITYPIPGNDDSPPA 230
Query: 234 IQYYCQVFKTAILKGKKAKQ--DTLKLLSEKQE 264
+ YC++F+T I + K+ ++ + L L ++E
Sbjct: 231 VHLYCRLFQTTITRAKEKRRQVEALYRLQAQKE 263
>gi|297269902|ref|XP_001097716.2| PREDICTED: 28S ribosomal protein S2, mitochondrial isoform 2
[Macaca mulatta]
Length = 363
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 110/213 (51%), Positives = 154/213 (72%), Gaps = 2/213 (0%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
PL++ D+F V+ L V+ +FDA+VHLGHK G M+PYI+G R Q I DL+Q+A L
Sbjct: 133 PLKHSDFFNVKELFSVRSLFDARVHLGHKAGCRHRFMEPYIFGNRLDQDIIDLEQTAAHL 192
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
+ ALNF AH+AYR GI+LF+ ++ Q S LIE TA+ C E+AHTR+++ G+ TN+ LF
Sbjct: 193 QLALNFTAHVAYRKGIILFISRNRQFSYLIENTARHCGEYAHTRYFKGGLLTNAPLLFGP 252
Query: 174 VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
RLPDL+I +TL T+ EP+ A+ +AAKM IPTVGIVD+NCNP LITYP+PGNDD+P A
Sbjct: 253 AVRLPDLIIFLHTLNTIFEPHVAVRDAAKMNIPTVGIVDTNCNPCLITYPIPGNDDSPPA 312
Query: 234 IQYYCQVFKTAILKGKKAKQ--DTLKLLSEKQE 264
+ YC++F+T I + K+ ++ + L L ++E
Sbjct: 313 VHLYCRLFQTTITRAKEKRRQVEALYRLQAQKE 345
>gi|281352038|gb|EFB27622.1| hypothetical protein PANDA_021849 [Ailuropoda melanoleuca]
Length = 234
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 151/205 (73%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
PL++ D+F V+ L V+ +FDA+VHLGHK G M+PYI+G R GQ I DL+Q+A L
Sbjct: 10 PLKHSDFFNVKELFSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLGQDIIDLEQTATHL 69
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
+ ALNF AH+AYR GI+LFV +S Q S LIE TA+ C E+AHTR+++ G+ TN+ L
Sbjct: 70 QLALNFTAHVAYRGGIILFVSRSRQFSHLIETTARSCGEYAHTRYFKGGLLTNAPLLLGP 129
Query: 174 VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
+ RLPDL+I +TL V EP+ A+ +AAKM IPTVG+VD+NCNP LITYPVPGNDD+P +
Sbjct: 130 MVRLPDLIIFLHTLNNVFEPHVAVRDAAKMHIPTVGVVDTNCNPCLITYPVPGNDDSPPS 189
Query: 234 IQYYCQVFKTAILKGKKAKQDTLKL 258
++ +C++F+TAI + K+ ++ L
Sbjct: 190 VRLFCRLFQTAINRAKQKRRQVEAL 214
>gi|426363535|ref|XP_004048894.1| PREDICTED: 28S ribosomal protein S2, mitochondrial [Gorilla gorilla
gorilla]
Length = 296
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 154/215 (71%), Gaps = 2/215 (0%)
Query: 41 ESKDTS--QEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVR 98
ES+D++ + + PL++ D+F V+ L V+ +FDA+VHLGHK G M+PYI+G R
Sbjct: 51 ESEDSTDFNDKILNEPLKHSDFFNVKELFSVRSLFDARVHLGHKAGCRHRFMEPYIFGSR 110
Query: 99 QGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRF 158
I DL+Q+A L+ ALNF AH+AYR GI+LF+ ++ Q S LIE A+DC E+AHTR+
Sbjct: 111 LDHDIIDLEQTATHLQLALNFTAHMAYRKGIILFISRNRQFSYLIENMARDCGEYAHTRY 170
Query: 159 WRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPN 218
++ GM TN+ LF RLP L+I +TL + EP+ A+ +AAKM IPTVGIVD+NCNP
Sbjct: 171 FKGGMLTNARLLFGPTVRLPGLIIFLHTLNNIFEPHVAVRDAAKMNIPTVGIVDTNCNPC 230
Query: 219 LITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
LITYPVPGNDD+P A+ YC++F+TAI + K+ ++
Sbjct: 231 LITYPVPGNDDSPLAVHLYCRLFQTAITRAKEKRR 265
>gi|363740575|ref|XP_003642353.1| PREDICTED: 28S ribosomal protein S2, mitochondrial, partial [Gallus
gallus]
Length = 223
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 152/208 (73%), Gaps = 1/208 (0%)
Query: 59 DYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALN 118
D+F+V+NL +KD+FDA+VHLGHK G + MKPYI+G R Q I DLDQ+ + L+ ALN
Sbjct: 3 DFFKVKNLFTLKDLFDARVHLGHKKGCRHQFMKPYIFGCRLDQDIIDLDQTMQHLQLALN 62
Query: 119 FVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLP 178
F AH+AYR GI+LFV ++ Q L+E TA++C E+AHTR+W+ G+ TN+ F RLP
Sbjct: 63 FTAHVAYRKGIILFVSRNRQFCHLVESTARECGEYAHTRYWQGGLLTNAHIQFGPGIRLP 122
Query: 179 DLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYC 238
DL+I ++L V EP+ AI +AAKM IPTVG+VD+NCNP LITYP+PGNDD+P+A++ YC
Sbjct: 123 DLLIFLSSLNNVFEPHVAIRDAAKMNIPTVGVVDTNCNPCLITYPIPGNDDSPTAMELYC 182
Query: 239 QVFKTAILKGKKAKQDTLKLLSEKQEVQ 266
++FK I+ K K+ +++ E Q Q
Sbjct: 183 KLFKMTIIHAKN-KRKQIEVFQELQSRQ 209
>gi|296399414|gb|ADH10532.1| mitochondrial ribosomal protein S2 [Zonotrichia albicollis]
Length = 239
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 151/218 (69%)
Query: 38 SNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGV 97
S+ + + + PL + D+F V+ L +KD+FDA+VHLGHK G M+PYI+G
Sbjct: 9 SSVGATKADDDKLLTEPLSHPDFFSVKELFTLKDLFDARVHLGHKKGCRHRFMEPYIFGC 68
Query: 98 RQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTR 157
R Q I DLDQ+ + L+ ALNF AH+AYR GI+LFV + Q L+E TA+ C E+AHTR
Sbjct: 69 RLDQDIIDLDQTMQHLQLALNFTAHVAYRGGIILFVSRRRQFCHLVESTARACGEYAHTR 128
Query: 158 FWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNP 217
+W+ G+ TN+ F RLPDL+I NTL V EP+ AI +AAKM IPTVG+VD+NCNP
Sbjct: 129 YWQGGLLTNAHIQFGPGVRLPDLLIFLNTLNNVFEPHVAIRDAAKMNIPTVGVVDTNCNP 188
Query: 218 NLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
LITYP+PGNDD+P+A++ YC++F+ I++ K ++ +
Sbjct: 189 CLITYPIPGNDDSPAAVELYCRLFRMTIIRAKDKRRQS 226
>gi|335281196|ref|XP_003353757.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like isoform 2
[Sus scrofa]
Length = 247
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 107/205 (52%), Positives = 150/205 (73%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
PL++ D+F ++ L V+ +FDA+VHLGHK G M+PY++G R GQ I DL+Q+A L
Sbjct: 23 PLKHADFFNLKELFSVRSLFDARVHLGHKAGCRHRFMEPYLFGSRLGQDIIDLEQTAAHL 82
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
+ ALNF AH+AYR+GI+LFV + Q + LIE TA+DC E+AHTR+++ G+ TN+ L
Sbjct: 83 QLALNFTAHVAYREGIILFVSRHRQFAHLIETTARDCGEYAHTRYFKGGLLTNAPLLLGP 142
Query: 174 VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
RLPDL+I +TL V EP+ A+ +AAKM IPTVGIVD+NCNP LITYPVPGNDD+P A
Sbjct: 143 GVRLPDLIIFLHTLNNVFEPHVAVRDAAKMNIPTVGIVDTNCNPALITYPVPGNDDSPPA 202
Query: 234 IQYYCQVFKTAILKGKKAKQDTLKL 258
++ +C++F+ AI + K+ ++ L
Sbjct: 203 VRLFCRLFQVAISRAKEKRRQVEAL 227
>gi|224073802|ref|XP_002187161.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like
[Taeniopygia guttata]
Length = 240
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 107/215 (49%), Positives = 153/215 (71%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
PL + D+F V+ L +KD+FDA+VHLGHK G M+PYI+G R Q I DLDQ+ + L
Sbjct: 26 PLSHPDFFSVKELFTLKDLFDARVHLGHKKGCRHRFMEPYIFGCRLDQDIIDLDQTMQHL 85
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
+ ALNF AH+AYR GI+LFV + Q L+E TA+ C E+AHTR+W+ G+ TN+ LF
Sbjct: 86 QLALNFTAHVAYRGGIILFVSRRRQFCHLVESTARACGEYAHTRYWQGGLLTNAHILFGP 145
Query: 174 VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
RLPDL+I +TL V EP+ AI +AAKM IPTVG+VD+NCNP LI+YP+PGNDD+P+A
Sbjct: 146 GVRLPDLLIFLSTLNNVFEPHVAIRDAAKMNIPTVGVVDTNCNPCLISYPIPGNDDSPAA 205
Query: 234 IQYYCQVFKTAILKGKKAKQDTLKLLSEKQEVQHN 268
++ YC++F+ I++ K ++ + + +++ + N
Sbjct: 206 MELYCKLFRMTIIRAKDKRRQSEAVEELQRKAEGN 240
>gi|291230876|ref|XP_002735378.1| PREDICTED: mitochondrial ribosomal protein S2-like [Saccoglossus
kowalevskii]
Length = 300
Score = 236 bits (602), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 110/223 (49%), Positives = 158/223 (70%), Gaps = 5/223 (2%)
Query: 37 TSNTESKDTSQEPE-----VPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMK 91
++N ++ +Q+ E + +PL++ DYF V L ++D+F A VH+GHK G L+ M+
Sbjct: 70 STNAATQKLAQQTESGTVKIQDPLQHPDYFDVHKLFTLQDLFRANVHVGHKTGLLNVHMR 129
Query: 92 PYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQ 151
YI+GVRQ I DLD++ + L+ ALNF +HIAYR G +LF+ +S Q + L+EKTA++C
Sbjct: 130 KYIFGVRQKICIIDLDKTVKHLQIALNFASHIAYRKGSILFINRSLQFTHLVEKTAKECG 189
Query: 152 EFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIV 211
EFA TR W+ G FTNS + +LPDLV+ NT V + + A+ ++AKM IPT+GIV
Sbjct: 190 EFAQTRRWQGGCFTNSLVQYGPEVKLPDLVVFLNTQNNVFQEHAAVRDSAKMNIPTIGIV 249
Query: 212 DSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
D+NCNPNLITYPVPGNDDTP A++ YC++FK AILK K+ +++
Sbjct: 250 DTNCNPNLITYPVPGNDDTPDAMELYCRLFKNAILKAKQMRKE 292
>gi|390458485|ref|XP_002743530.2| PREDICTED: 28S ribosomal protein S2, mitochondrial [Callithrix
jacchus]
Length = 296
Score = 236 bits (601), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 151/219 (68%)
Query: 35 PSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYI 94
P+ E + + PL++ D+F V+ L V+ +FDA+VHLGHK G M+PYI
Sbjct: 47 PAIGEPEDGSDLHDKILNEPLKHSDFFNVKELFSVRSLFDARVHLGHKAGCRHRFMEPYI 106
Query: 95 YGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFA 154
+G R Q I DL+Q+A L+ ALNF AH+AYR GI+LF+ ++ Q S LIE A+DC E+A
Sbjct: 107 FGSRLDQDIIDLEQTATHLQLALNFTAHMAYRKGIILFISRNRQFSYLIENLARDCGEYA 166
Query: 155 HTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSN 214
HTR++ G+ TN+ LF RLPDL+I +TL V EP+ A+ +AAKM IPTVGIVD+N
Sbjct: 167 HTRYFTGGLLTNAPLLFGPGVRLPDLIIFLHTLNNVFEPHIAVRDAAKMNIPTVGIVDTN 226
Query: 215 CNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
CNP L+TYPVPGNDD+P A+ YC++F+T I + K+ ++
Sbjct: 227 CNPCLVTYPVPGNDDSPPAVHLYCRLFRTTITRAKEKRR 265
>gi|410979418|ref|XP_003996081.1| PREDICTED: 28S ribosomal protein S2, mitochondrial, partial [Felis
catus]
Length = 333
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 108/192 (56%), Positives = 143/192 (74%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
PL++ D+F V+ L V+ +FDA+VHLGHK G M+PYI+G R Q I DL+Q+A L
Sbjct: 49 PLKHSDFFNVKELFSVRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDQDIIDLEQTAAHL 108
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
R ALNF AH+AYR GI+LFVG++ Q S LIE TA+DC E+AHTR+++ G+ TN+ L
Sbjct: 109 RLALNFTAHVAYRKGIILFVGRNRQFSHLIETTARDCGEYAHTRYFKGGLLTNAPLLLGP 168
Query: 174 VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
RLPDL+I +TL V EP+ A+ +AAKM IPTVGIVD+NCNP LITYPVPGNDD+P +
Sbjct: 169 KVRLPDLIIFLHTLNNVFEPHVAVRDAAKMQIPTVGIVDTNCNPCLITYPVPGNDDSPPS 228
Query: 234 IQYYCQVFKTAI 245
+ +C++F+T I
Sbjct: 229 VHLFCRLFQTII 240
>gi|296399411|gb|ADH10530.1| mitochondrial ribosomal protein S2 [Zonotrichia albicollis]
Length = 239
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 151/218 (69%)
Query: 38 SNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGV 97
S+ + + + PL + D+F V+ L +KD+FDA+VHLGHK G M+PYI+G
Sbjct: 9 SSVGATKADDDKLLTEPLSHPDFFSVKELFTLKDLFDARVHLGHKKGCRHRFMEPYIFGC 68
Query: 98 RQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTR 157
R Q I DLDQ+ + L+ ALNF AH+AYR GI+LFV + Q L+E TA+ C E+AHTR
Sbjct: 69 RLDQDIIDLDQTMQHLQLALNFTAHVAYRGGIILFVSRRRQFCHLVESTARACGEYAHTR 128
Query: 158 FWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNP 217
+W+ G+ TN+ F RLPDL+I +TL V EP+ AI +AAKM IPTVG+VD+NCNP
Sbjct: 129 YWQGGLLTNAHIQFGPGVRLPDLLIFLSTLNNVFEPHVAIRDAAKMNIPTVGVVDTNCNP 188
Query: 218 NLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
LITYP+PGNDD+P+A++ YC++F+ I++ K ++ +
Sbjct: 189 CLITYPIPGNDDSPAAVELYCRLFRMTIIRAKDKRRQS 226
>gi|432884766|ref|XP_004074577.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Oryzias
latipes]
Length = 269
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 142/200 (71%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
PL D+F+V L +KD+FDA+VHLGHK G M+PY+YG R Q IFDLDQ+ E L
Sbjct: 54 PLEKPDFFRVAELFSLKDLFDARVHLGHKKGCRHRLMEPYLYGCRLDQDIFDLDQTVEHL 113
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
+ ALNF AHIAYR GI+LFV + Q L+E TA+DC E+AHTR+W+ G+ TN+ +
Sbjct: 114 QLALNFTAHIAYRGGIILFVSRRRQFGHLVESTAKDCGEYAHTRYWQGGLLTNANIQYGP 173
Query: 174 VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
RLPDL+I +TL V + + + +AAKM IPTVG+VDSNCNP L+TYPVPGNDDTP A
Sbjct: 174 GVRLPDLIIFLSTLNNVFQQHVGVRDAAKMNIPTVGVVDSNCNPCLVTYPVPGNDDTPVA 233
Query: 234 IQYYCQVFKTAILKGKKAKQ 253
++ YC++FK I + K ++
Sbjct: 234 MELYCRLFKMTINRAKDKRR 253
>gi|47228392|emb|CAG05212.1| unnamed protein product [Tetraodon nigroviridis]
Length = 262
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/206 (52%), Positives = 149/206 (72%), Gaps = 1/206 (0%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
PL+ D+F+V L +KD+FDA+VHLGHK G M+PY+YG R Q I DLDQ+ E L
Sbjct: 54 PLKKQDFFRVSELFSLKDLFDARVHLGHKRGCRHRLMEPYLYGCRLEQDIIDLDQTMEHL 113
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
+ ALNF AH+AYR G++LFV + Q L+E TA++C E+AHTR+W+ G+ TN+ +
Sbjct: 114 QLALNFTAHVAYRGGVILFVSRRRQFGHLVECTAKECGEYAHTRYWQGGLLTNANIQYGP 173
Query: 174 VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
RLPDL+I +TL V + + I +AAKM IPTVG+VDSNCNP+L+TYPVPGNDDTP+A
Sbjct: 174 GVRLPDLIIFLSTLNNVFQQHVGIRDAAKMNIPTVGVVDSNCNPSLLTYPVPGNDDTPAA 233
Query: 234 IQYYCQVFKTAILKGKKAKQDTLKLL 259
+++YC++FK I + K K+ ++LL
Sbjct: 234 VEFYCRLFKMTITRAKD-KRRQMELL 258
>gi|348524346|ref|XP_003449684.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like
[Oreochromis niloticus]
Length = 274
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/228 (50%), Positives = 152/228 (66%), Gaps = 7/228 (3%)
Query: 27 TVPNVDP-LPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGS 85
T P+V P P + K +Q E P D+F+V L +KD+FDA+VHLGHK G
Sbjct: 32 TAPSVKPPQPQADDVTEKILNQPLEKP------DFFRVAELFSLKDLFDARVHLGHKKGC 85
Query: 86 LDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEK 145
M+PY+YG R I DLDQ+ E L+ ALNF AHIAYR GI+LFV + Q L+E
Sbjct: 86 RHRLMEPYLYGCRLDHDIIDLDQTMEHLQLALNFTAHIAYRGGIILFVSRRRQFGHLVET 145
Query: 146 TAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
TA+DC E+AHTR+W+ G+ TN+ + RLPDL+I +TL V + + I +AAKM I
Sbjct: 146 TAKDCGEYAHTRYWQGGLLTNANIQYGPGVRLPDLIIFLSTLNNVFQQHVGIRDAAKMNI 205
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
PTVG+VDSNCNP+L+TYPVPGNDDTP+A++ YC++FK I + K ++
Sbjct: 206 PTVGVVDSNCNPSLVTYPVPGNDDTPAAVELYCRLFKMTINRAKDRRK 253
>gi|256090197|ref|XP_002581095.1| 30S ribosomal protein S2 [Schistosoma mansoni]
gi|360044376|emb|CCD81923.1| putative 30s ribosomal protein S2 (prokaryotic and organellar)
[Schistosoma mansoni]
Length = 255
Score = 233 bits (593), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 115/235 (48%), Positives = 160/235 (68%), Gaps = 6/235 (2%)
Query: 36 STSNTESKDTSQEPE---VPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKP 92
+TS +E + P +PL DYF ++NLV V D+F A+VHLGH+ +E MKP
Sbjct: 22 TTSGSEKLKQNNCPHSSYCEDPLSCSDYFGLKNLVNVTDLFQARVHLGHRSVLRNEYMKP 81
Query: 93 YIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQE 152
YIYG RQG I DL Q+ L+ DALNF AHIAYR GI+LF+ Q+ Q LIEKTA++ E
Sbjct: 82 YIYGCRQGIDIIDLQQTCSLMFDALNFAAHIAYRQGIILFMHQNKQMLPLIEKTAENIGE 141
Query: 153 FAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVD 212
++H R W G+FTNS +F RLPDL++ +T ++ P+ A+ +AAKM IPT+G+VD
Sbjct: 142 YSHCRKWEGGVFTNSSDVFHDSVRLPDLILFLSTCNSISRPHSAVRDAAKMLIPTIGVVD 201
Query: 213 SNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK-AKQDTLKLLSEKQEVQ 266
+N +P LI+YPVPGNDD+P+A++ +C +F AI +GKK A +D +LL E+ + Q
Sbjct: 202 TNSDPRLISYPVPGNDDSPTAVRLFCALFAEAITRGKKTATRD--QLLKEQLDRQ 254
>gi|257206626|emb|CAX82941.1| Mitochondrial 28S ribosomal protein S2 [Schistosoma japonicum]
Length = 270
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 105/201 (52%), Positives = 147/201 (73%)
Query: 51 VPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSA 110
+ NPL DYF +++LV V D+F A+VHLGH+ ++ MKPYI+G RQG I DLDQ+
Sbjct: 40 ISNPLSCPDYFGLKSLVSVTDLFQARVHLGHRSVLRNDYMKPYIFGCRQGIDIIDLDQTC 99
Query: 111 ELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKL 170
LL DALNF AHIAYR GI+LFV Q+ Q L+E+TA++ E+++ R W G+FTNS +
Sbjct: 100 SLLFDALNFTAHIAYRQGIILFVYQNKQMLPLVERTAENVGEYSYCRKWEGGVFTNSSDV 159
Query: 171 FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDT 230
F RLPDLV+L +T ++ P+ A+ +AAKM IPTVG+VD+N +P LI+YPVPGNDD+
Sbjct: 160 FHDSVRLPDLVLLLSTCNSISRPHSAVRDAAKMLIPTVGVVDTNADPRLISYPVPGNDDS 219
Query: 231 PSAIQYYCQVFKTAILKGKKA 251
P+A++ +C +F AI +GK++
Sbjct: 220 PTAVRLFCALFAEAIARGKRS 240
>gi|357610893|gb|EHJ67198.1| hypothetical protein KGM_10814 [Danaus plexippus]
Length = 171
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 132/172 (76%), Gaps = 3/172 (1%)
Query: 90 MKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQD 149
M PYIYG RQG +IFDLD +AE LR ALNF AHIAYR GI+ F ++A N+ L+EKTAQ+
Sbjct: 1 MLPYIYGSRQGHLIFDLDITAEHLRKALNFAAHIAYRGGIICFFNRNALNAHLVEKTAQE 60
Query: 150 CQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVG 209
C E+AHTRFWR G+FTN+ F AVTRLPDL I NT +L + A+ ++AKM IPT+G
Sbjct: 61 CGEYAHTRFWRGGIFTNANHQFGAVTRLPDLCIFMNTQNNILNQHTAVRDSAKMLIPTIG 120
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSE 261
IVDSNC+PNLITYPVPGNDDTP AI+ YC++FK AI +GK A+ +K L E
Sbjct: 121 IVDSNCSPNLITYPVPGNDDTPRAIEMYCKLFKEAIKRGKDAR---MKFLQE 169
>gi|395506410|ref|XP_003757525.1| PREDICTED: 28S ribosomal protein S2, mitochondrial [Sarcophilus
harrisii]
Length = 405
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/213 (50%), Positives = 153/213 (71%), Gaps = 1/213 (0%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
PL++ D+F ++ L +K +FDA+VHLGHK G M+PYI+G R Q I DLDQ+ + L
Sbjct: 174 PLKHADFFNIKELFSLKTLFDARVHLGHKRGCRHRFMEPYIFGTRLEQDIIDLDQTVKHL 233
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
+ ALNF AH+AYR GI+LFV ++ Q + LIEK A +C+E+AHTR+++ G+ TN+ F
Sbjct: 234 QLALNFTAHMAYRKGIILFVSRNRQFTHLIEKMALNCEEYAHTRYFKGGLLTNAPVQFGP 293
Query: 174 VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
RLPDL++ +TL V EP+ A+ +AAKM IPTVGIVD+NCNP LI+YP+PGNDD+P +
Sbjct: 294 SVRLPDLMVFFHTLNNVFEPHVAVRDAAKMNIPTVGIVDTNCNPCLISYPIPGNDDSPDS 353
Query: 234 IQYYCQVFKTAILKGKKAKQDTLKLLSEKQEVQ 266
I+ +C +F+T I K KAK+ ++ L +Q Q
Sbjct: 354 IKLFCHLFETTI-KRAKAKRKQMEFLYSQQSKQ 385
>gi|410903768|ref|XP_003965365.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Takifugu
rubripes]
Length = 330
Score = 229 bits (585), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 147/210 (70%)
Query: 44 DTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQII 103
D S E + PL + D+F V L +KD+F+A+VHLGHK G M+PY+YG R Q I
Sbjct: 105 DDSSEKIMDLPLNHPDFFHVSELFSLKDLFNARVHLGHKRGCRHRLMEPYLYGCRLEQDI 164
Query: 104 FDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGM 163
DL+Q+ E L+ ALNF AH+AYR GI+LF+ + Q L+E TA++C E+AH R+W+ G+
Sbjct: 165 IDLEQTVEHLQLALNFTAHVAYRGGIILFISRRRQFGHLVECTAKECGEYAHARYWQGGL 224
Query: 164 FTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYP 223
FTN++ + RLPDL+I +TL V + + I +AAKM IPTVG+VD+NCNP+L+TYP
Sbjct: 225 FTNADTQYSPGVRLPDLIIFLSTLNNVFQQHIGIRDAAKMNIPTVGVVDTNCNPSLLTYP 284
Query: 224 VPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
VPGNDDTP A++ YC++FK I + K ++
Sbjct: 285 VPGNDDTPVAMELYCRLFKMTINRAKDRRR 314
>gi|67677978|gb|AAH97661.1| Unknown (protein for IMAGE:6631538), partial [Xenopus laevis]
Length = 274
Score = 229 bits (584), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 115/241 (47%), Positives = 163/241 (67%), Gaps = 5/241 (2%)
Query: 23 KKLSTVPNVDPLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHK 82
K S+ P L TS + D +Q+ V NPL++ D+F V+ L ++++FDA+VHLGHK
Sbjct: 33 KCYSSAPAAHQLQETS---TADFTQKLLV-NPLKHPDFFNVKELFSLRELFDARVHLGHK 88
Query: 83 IGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLL 142
G M+ Y++G R Q I DLDQ+ L+ ALN AHIAYR G++LFV ++ Q + L
Sbjct: 89 KGCRHRLMESYLFGCRLEQDIIDLDQTMSHLQLALNITAHIAYRKGVILFVSRNRQFTHL 148
Query: 143 IEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
IE TA+DC E+AHTR+W+ G+ TN+ + RLPDL+I ++L V E + AI +AAK
Sbjct: 149 IESTAKDCGEYAHTRYWQGGLLTNAPVQYGVGIRLPDLIIFLSSLNNVFEQHLAIRDAAK 208
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
M IPT+GIVD+NCNP+LITYP+PGNDD+P A++ YC++FK I + K K+ ++LL
Sbjct: 209 MNIPTMGIVDTNCNPSLITYPIPGNDDSPPAMELYCRLFKMTINRAKD-KRKQMELLQGL 267
Query: 263 Q 263
Q
Sbjct: 268 Q 268
>gi|148235576|ref|NP_001089112.1| uncharacterized protein LOC733351 [Xenopus laevis]
gi|115292090|gb|AAI22476.1| LOC733351 protein [Xenopus laevis]
Length = 282
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 157/234 (67%), Gaps = 3/234 (1%)
Query: 33 PLPSTSNTESKDTSQ--EPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERM 90
P P+ + T+ + +PL++ D+F V+ L ++++FDA+VHLGHK G M
Sbjct: 45 PAPAAQQHQETSTTDFTQKLFADPLKHPDFFNVKELFSLRELFDARVHLGHKKGCRHRLM 104
Query: 91 KPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDC 150
+ Y++G R Q I DLDQ+ L+ ALN AHIAYR GI+LFV ++ Q + LIE TA+DC
Sbjct: 105 ESYLFGCRLEQDIIDLDQTMSHLQLALNITAHIAYRKGIILFVSRNRQFTYLIESTAKDC 164
Query: 151 QEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGI 210
E+AHTR+W+ G+ TN+ + RLPDL+I +TL V E + AI +AAKM IPT+GI
Sbjct: 165 GEYAHTRYWQGGLLTNAPVQYGVGVRLPDLIIFLSTLNNVFEQHMAIRDAAKMNIPTMGI 224
Query: 211 VDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQE 264
VD+NCNP+LITYP+PGNDD+P A++ YC++FK I + K K+ ++LL Q
Sbjct: 225 VDTNCNPSLITYPIPGNDDSPPAMELYCRLFKMTINRAKD-KRKQMELLQGLQS 277
>gi|62857737|ref|NP_001016765.1| mitochondrial ribosomal protein S2 [Xenopus (Silurana) tropicalis]
gi|89267463|emb|CAJ83584.1| mitochondrial ribosomal protein S2 [Xenopus (Silurana) tropicalis]
Length = 280
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 151/210 (71%), Gaps = 1/210 (0%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
PL++ D+F V+ L +++++D++VHLGHK G M+PY++G R Q I DLDQ+ L
Sbjct: 66 PLKHPDFFNVKELFSLRELYDSRVHLGHKKGCRHRLMEPYLFGCRLEQDIIDLDQTMRHL 125
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
+ ALN AHIAYR G++LFV ++ Q S LIE TA+DC E+AHTR+W+ G+ TN+ + A
Sbjct: 126 QLALNVTAHIAYRKGVILFVSRNRQFSHLIESTARDCGEYAHTRYWQGGLLTNAPVQYGA 185
Query: 174 VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
RLPDL++ +TL TV E + AI +AAKM IPTVG+VD+NCNP LITYP+PGNDD+ A
Sbjct: 186 GVRLPDLIVFLSTLNTVFEQHVAIRDAAKMNIPTVGVVDTNCNPGLITYPIPGNDDSAPA 245
Query: 234 IQYYCQVFKTAILKGKKAKQDTLKLLSEKQ 263
++ YC++FK I + K+ K+ ++LL Q
Sbjct: 246 MELYCRLFKMTINRAKE-KRKQMELLQGLQ 274
>gi|147899103|ref|NP_001085303.1| mitochondrial ribosomal protein S2 [Xenopus laevis]
gi|133737010|gb|AAI33759.1| LOC443704 protein [Xenopus laevis]
Length = 280
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 162/238 (68%), Gaps = 5/238 (2%)
Query: 26 STVPNVDPLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGS 85
S+ P L TS + D +Q+ + NPL++ D+F V+ L ++++FDA+VHLGHK G
Sbjct: 42 SSAPAAHQLQETS---TADFTQK-LLMNPLKHPDFFNVKELFSLRELFDARVHLGHKKGC 97
Query: 86 LDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEK 145
M+ Y++G R Q I DLDQ+ L+ ALN AHIAYR G++LFV ++ Q + LIE
Sbjct: 98 RHRLMESYLFGCRLEQDIIDLDQTMSHLQLALNITAHIAYRKGVILFVSRNRQFTHLIES 157
Query: 146 TAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
TA+DC E+AHTR+W+ G+ TN+ + RLPDL+I ++L V E + AI +AAKM I
Sbjct: 158 TAKDCGEYAHTRYWQGGLLTNAPVQYGVGVRLPDLIIFLSSLNNVFEQHLAIRDAAKMNI 217
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQ 263
PT+GIVD+NCNP+LITYP+PGNDD+P A++ YC++FK I + K K+ ++LL Q
Sbjct: 218 PTMGIVDTNCNPSLITYPIPGNDDSPPAMELYCRLFKMTINRAKD-KRKQMELLQGLQ 274
>gi|49257614|gb|AAH74242.1| LOC443704 protein, partial [Xenopus laevis]
Length = 277
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/238 (47%), Positives = 162/238 (68%), Gaps = 5/238 (2%)
Query: 26 STVPNVDPLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGS 85
S+ P L TS + D +Q+ + NPL++ D+F V+ L ++++FDA+VHLGHK G
Sbjct: 39 SSAPAAHQLQETS---TADFTQK-LLMNPLKHPDFFNVKELFSLRELFDARVHLGHKKGC 94
Query: 86 LDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEK 145
M+ Y++G R Q I DLDQ+ L+ ALN AHIAYR G++LFV ++ Q + LIE
Sbjct: 95 RHRLMESYLFGCRLEQDIIDLDQTMSHLQLALNITAHIAYRKGVILFVSRNRQFTHLIES 154
Query: 146 TAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
TA+DC E+AHTR+W+ G+ TN+ + RLPDL+I ++L V E + AI +AAKM I
Sbjct: 155 TAKDCGEYAHTRYWQGGLLTNAPVQYGVGVRLPDLIIFLSSLNNVFEQHLAIRDAAKMNI 214
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQ 263
PT+GIVD+NCNP+LITYP+PGNDD+P A++ YC++FK I + K K+ ++LL Q
Sbjct: 215 PTMGIVDTNCNPSLITYPIPGNDDSPPAMELYCRLFKMTINRAKD-KRKQMELLQGLQ 271
>gi|334312220|ref|XP_001372572.2| PREDICTED: 28S ribosomal protein S2, mitochondrial-like
[Monodelphis domestica]
Length = 362
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/234 (48%), Positives = 155/234 (66%), Gaps = 2/234 (0%)
Query: 33 PLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKP 92
P P E D Q+ + PL++ D+F +R L ++ +FDA+VHLGHK G M+P
Sbjct: 116 PAPGIFQQED-DNLQDKILSEPLKHSDFFNIRELFSLQTLFDARVHLGHKKGCRHRFMEP 174
Query: 93 YIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQE 152
YI+G R Q I DLDQ+ + L+ ALNF AH+AYR GI+LFV ++ Q + LIEK A DC E
Sbjct: 175 YIFGTRLEQDIIDLDQTVKHLQLALNFTAHVAYRKGIILFVSRNRQFTHLIEKLAVDCGE 234
Query: 153 FAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVD 212
+AH R+++ G+ TN+ F RLPDL+I +TL V E + A+ +AAKM IPTVGIVD
Sbjct: 235 YAHVRYFKGGLLTNAPVQFGPGVRLPDLMIFFHTLNNVFETHVAVRDAAKMNIPTVGIVD 294
Query: 213 SNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEVQ 266
+NCNP LI+YP+PGNDD+P +I+ +CQ+F I K KAK+ ++ L Q Q
Sbjct: 295 TNCNPCLISYPIPGNDDSPDSIKLFCQLFGMTI-KRAKAKRKQMEFLYSLQSKQ 347
>gi|76780354|gb|AAI06456.1| LOC733351 protein [Xenopus laevis]
Length = 278
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 109/233 (46%), Positives = 157/233 (67%), Gaps = 3/233 (1%)
Query: 33 PLPSTSNTESKDTSQ--EPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERM 90
P P+ + T+ + +PL++ D+F V+ L ++++FDA+VHLGHK G M
Sbjct: 41 PAPAAQQHQETSTTDFTQKLFADPLKHPDFFNVKELFSLRELFDARVHLGHKKGCRHRLM 100
Query: 91 KPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDC 150
+ Y++G R Q I DLDQ+ L+ ALN AHIAYR GI+LFV ++ Q + +IE TA+DC
Sbjct: 101 ESYLFGCRLEQDIIDLDQTMSHLQLALNITAHIAYRKGIILFVSRNRQFTYMIESTAKDC 160
Query: 151 QEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGI 210
E+AHTR+W+ G+ TN+ + RLPDL+I +TL V E + AI +AAKM IPT+GI
Sbjct: 161 GEYAHTRYWQGGLLTNAPVQYGVGVRLPDLIIFLSTLNNVFEQHMAIRDAAKMNIPTMGI 220
Query: 211 VDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQ 263
VD+NCNP+LITYP+PGNDD+P A++ YC++FK I + K K+ ++LL Q
Sbjct: 221 VDTNCNPSLITYPIPGNDDSPPAMELYCRLFKMTINRAKD-KRKQMELLQGLQ 272
>gi|324519945|gb|ADY47523.1| 28S ribosomal protein S2 [Ascaris suum]
Length = 254
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 148/205 (72%)
Query: 48 EPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLD 107
+P V + L+ DYF++ LV+++DMF A+VH GHKIG+L+E+MK +YG R G IFDLD
Sbjct: 43 KPYVGDILQNEDYFEMSRLVRIEDMFHARVHYGHKIGTLNEKMKWSLYGERLGICIFDLD 102
Query: 108 QSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS 167
+ + L ALNF++H+AYR G++LFV N L+IE+ A E++H R W++G TNS
Sbjct: 103 ITRKYLIKALNFISHVAYRGGVILFVSSDRNNMLMIERMASLVGEYSHVRKWQEGTLTNS 162
Query: 168 EKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGN 227
+LF A RLPD +I +TLT+VLE +PA+ EAAKM IP+VG+VDSN +P+ I+Y +PGN
Sbjct: 163 RQLFGAPIRLPDTIIFLSTLTSVLETHPAVIEAAKMAIPSVGVVDSNSDPSYISYAIPGN 222
Query: 228 DDTPSAIQYYCQVFKTAILKGKKAK 252
DD+ +++Y+ +F AI GK+A+
Sbjct: 223 DDSTPSVEYFMNLFVRAIETGKRAR 247
>gi|123701323|ref|NP_001074162.1| 28S ribosomal protein S2, mitochondrial [Danio rerio]
gi|120537789|gb|AAI29436.1| Zgc:158760 [Danio rerio]
Length = 264
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 145/206 (70%), Gaps = 1/206 (0%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
PL DYF + L +KD+FDA+VHLGHK G M+PY++G R I DL+Q+ + L
Sbjct: 57 PLTQPDYFHLSELFSMKDLFDARVHLGHKKGCRHALMEPYLFGCRLDMDIIDLEQTVDHL 116
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
+ ALNF AH+A+R G+VLFV + Q + L+E TA+DC E+AHTR+W+ G+ TN+ +
Sbjct: 117 QRALNFTAHVAFRGGVVLFVSRRRQFAHLVETTARDCGEYAHTRYWKGGLLTNAPIQYNP 176
Query: 174 VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
RLPDL++ +TL V + I +AAKM IPTVGIVDSNCNP+LI+YPVPGNDDTP+A
Sbjct: 177 GVRLPDLIVFLSTLNNVFREHVGIRDAAKMNIPTVGIVDSNCNPSLISYPVPGNDDTPAA 236
Query: 234 IQYYCQVFKTAILKGKKAKQDTLKLL 259
++ YC++FK I K K K+ ++LL
Sbjct: 237 MELYCRLFKMTI-KRAKDKRRQMELL 261
>gi|390347793|ref|XP_787912.3| PREDICTED: 28S ribosomal protein S2, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 246
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/224 (48%), Positives = 151/224 (67%), Gaps = 5/224 (2%)
Query: 31 VDPLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERM 90
V P S +DT E L + D+F V L ++F+++VHLGHK G LD+RM
Sbjct: 22 VTPESSLEGETRRDTVDES-----LNHDDFFGVSKLFTRTELFESRVHLGHKEGLLDQRM 76
Query: 91 KPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDC 150
K Y+ G R+ Q I DLDQ+ LL ALNF A+IAYR+GI+LFV + Q + +E+ A+ C
Sbjct: 77 KKYMIGTRREQCIMDLDQTTPLLNSALNFTANIAYRNGIILFVNRVPQFAHAVEEMARAC 136
Query: 151 QEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGI 210
E+AHTR W++G FTN++ TRLPDL+I NTL V + A+ +AAKM IPT+ +
Sbjct: 137 GEYAHTRHWQKGCFTNAQIQMGPGTRLPDLIIFLNTLNDVFSQHQAVIDAAKMNIPTIAV 196
Query: 211 VDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
VDSNCNPNLITYP+PGNDDTP A++ + ++FK ++L GK+ +++
Sbjct: 197 VDSNCNPNLITYPIPGNDDTPVAVELFMRLFKESVLLGKQKRKE 240
>gi|72009567|ref|XP_780586.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 267
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/224 (48%), Positives = 151/224 (67%), Gaps = 5/224 (2%)
Query: 31 VDPLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERM 90
V P S +DT E L + D+F V NL ++F+++VHLGHK G LD+RM
Sbjct: 43 VTPESSLEGETRRDTVDES-----LNHDDFFGVSNLFTRTELFESRVHLGHKEGLLDQRM 97
Query: 91 KPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDC 150
K Y+ G R+ Q I DLDQ+ LL ALN A+IAYR+GI+LFV + Q + +E+ A+ C
Sbjct: 98 KKYMIGTRREQCIMDLDQTTPLLNSALNXTANIAYRNGIILFVNRVPQFAHAVEEMARAC 157
Query: 151 QEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGI 210
E+AHTR W++G FTN++ TRLPDL+I NTL V + A+ +AAKM IPT+ +
Sbjct: 158 GEYAHTRHWQKGCFTNAQIQMGPGTRLPDLIIFLNTLNDVFSQHQAVVDAAKMNIPTIAV 217
Query: 211 VDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
VDSNCNPNLITYP+PGNDDTP A++ + ++FK ++L GK+ +++
Sbjct: 218 VDSNCNPNLITYPIPGNDDTPVAVELFMRLFKESVLLGKQKRKE 261
>gi|358342896|dbj|GAA51608.1| 28S ribosomal protein S2 mitochondrial [Clonorchis sinensis]
Length = 249
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 146/205 (71%), Gaps = 1/205 (0%)
Query: 53 NPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAEL 112
NPL DYF ++++V +++F A+ HLGH+ +E M PYIYG RQG I DLDQ+ L
Sbjct: 18 NPLDSPDYFSLKDIVTTRELFHARAHLGHRSVLRNEYMIPYIYGCRQGVDILDLDQTGPL 77
Query: 113 LRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFR 172
L DALNF AHIAYR GI+LF+ + Q L+E+TA++ EF+ R W +FT+++ LFR
Sbjct: 78 LFDALNFTAHIAYRKGIILFISDNQQTLPLVERTARNVGEFSCCRKWYTAVFTDTKNLFR 137
Query: 173 AVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPS 232
RLPDLVI +TLTT+ +P+ A+ +AAK+ IP+VGIVD+N +P LITYP+P NDD+P
Sbjct: 138 GAVRLPDLVIFLSTLTTLAQPHTAVRDAAKLLIPSVGIVDTNADPRLITYPIPANDDSPV 197
Query: 233 AIQYYCQVFKTAILKGK-KAKQDTL 256
I+ +C +F AI++GK +A +D +
Sbjct: 198 TIRLFCALFSEAIVRGKRRAARDAM 222
>gi|242020264|ref|XP_002430575.1| mitochondrial 28S ribosomal protein S2, putative [Pediculus humanus
corporis]
gi|212515747|gb|EEB17837.1| mitochondrial 28S ribosomal protein S2, putative [Pediculus humanus
corporis]
Length = 229
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 99/187 (52%), Positives = 139/187 (74%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+ +KD+F+A+VH GHKI SL++ MK Y++G R G +IFDLD +++ L+ ALNF AH+AY
Sbjct: 1 MFTIKDLFNARVHYGHKISSLNDNMKQYLFGSRLGHLIFDLDITSQHLQKALNFTAHVAY 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
++GI+LF+ ++ + +L++EKTA CQE+A TR W FT S ++F RLPDL I N
Sbjct: 61 QNGIILFISKNPRFTLVVEKTAVACQEYAVTREWNAFTFTGSYRVFENYIRLPDLCIFLN 120
Query: 186 TLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAI 245
TL E +PA+ +AAKMCIPT+ I D+NC+PNLIT+PVPGNDD+ +I YC++FK AI
Sbjct: 121 TLQENCEQHPAVKDAAKMCIPTIAITDTNCDPNLITFPVPGNDDSIESINLYCKLFKNAI 180
Query: 246 LKGKKAK 252
L GK A+
Sbjct: 181 LAGKNAR 187
>gi|312076041|ref|XP_003140684.1| 28S ribosomal protein S2 [Loa loa]
gi|307764151|gb|EFO23385.1| 28S ribosomal protein S2 [Loa loa]
Length = 255
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 142/206 (68%)
Query: 51 VPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSA 110
V + L+ DYF + ++K+ D+F A+ H GHK+G+++ERMK ++G R G IFDL ++
Sbjct: 47 VDDTLKESDYFGFKKMIKIDDLFHARAHYGHKVGTVNERMKWSLFGERLGVCIFDLQKTR 106
Query: 111 ELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKL 170
E L ALNFVAH+A R G+ LF+ N L++E+ A + EFAH R W++ N++ L
Sbjct: 107 ECLITALNFVAHMAMRGGMFLFITTGRNNMLMVERKALEIDEFAHVRGWKEDTLLNAKAL 166
Query: 171 FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDT 230
F A RLPD +I +TLT++LE +PA+ EAAKM IPTVG+VDSN +P ITYP+PGNDD+
Sbjct: 167 FGAPIRLPDTIIFLSTLTSILETHPAVREAAKMVIPTVGVVDSNADPTYITYPIPGNDDS 226
Query: 231 PSAIQYYCQVFKTAILKGKKAKQDTL 256
S++QY+ F AI GK++++ L
Sbjct: 227 TSSVQYFMDCFVKAIKMGKESRRSLL 252
>gi|198424928|ref|XP_002126843.1| PREDICTED: similar to Mitochondrial 28S ribosomal protein S2 (S2mt)
(MRP-S2) [Ciona intestinalis]
Length = 278
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/215 (47%), Positives = 147/215 (68%), Gaps = 4/215 (1%)
Query: 51 VPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSA 110
+ +PL++ D+F ++NLV +K +F ++V+ GHK GS +E M+PY+YG R G IFDLDQ+
Sbjct: 64 ITDPLQHPDFFGIKNLVTMKKLFFSRVYFGHKKGSRNEHMQPYLYGNRLGVDIFDLDQTL 123
Query: 111 ELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKL 170
E + ALNFVAHIAY GI+LF+ +S Q+ +E A+ C E+AHTR W+QG+ N +
Sbjct: 124 EHMHRALNFVAHIAYLKGIILFIMRSQQHGHAVELAAKACGEYAHTREWQQGLLLNMGQK 183
Query: 171 FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDT 230
R+V RLPD+ I + + + +PA+ E K+ I TVGIVDSN NP +ITYPVPGNDD+
Sbjct: 184 HRSV-RLPDICIFLSLQDVMNQEHPAVAECGKLKIATVGIVDSNVNPTMITYPVPGNDDS 242
Query: 231 PSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEV 265
P ++ Y Q+F+ AI G KQ ++ +KQ+V
Sbjct: 243 PESVGLYLQLFQLAIQSG---KQKRIEADQQKQDV 274
>gi|341899680|gb|EGT55615.1| hypothetical protein CAEBREN_00965 [Caenorhabditis brenneri]
Length = 266
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 140/209 (66%)
Query: 45 TSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIF 104
T +P V L++ D F L+ V +MF A++H GHK+G+L++ MK +YG R G IF
Sbjct: 52 TVLKPYVSASLQHEDLFNFEKLIHVDEMFKARLHYGHKVGTLNDNMKWALYGERLGVCIF 111
Query: 105 DLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMF 164
DLD + + L ALNFVAH+A R G++LFV + + +EK A++ +++H R W+ G
Sbjct: 112 DLDVTKKFLVRALNFVAHVAMRGGMILFVTSNRDSMFDVEKAAEEVGQYSHVRKWQSGTL 171
Query: 165 TNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPV 224
TN+ +L A RLPD V +TLT++ E +PAI EAAKM IPT+G+VDSN +P +TY V
Sbjct: 172 TNTRQLLGASVRLPDAVCFLSTLTSLGENHPAIIEAAKMAIPTIGVVDSNSDPAYLTYLV 231
Query: 225 PGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
PGNDDTP + +Y ++FK A+ KG++ ++
Sbjct: 232 PGNDDTPQSTEYLMRMFKEAVRKGQEERK 260
>gi|344239633|gb|EGV95736.1| 28S ribosomal protein S2, mitochondrial [Cricetulus griseus]
Length = 193
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 131/177 (74%), Gaps = 1/177 (0%)
Query: 90 MKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQD 149
M+PYI+G R GQ I DL+Q+A L+ ALNF AH+AYR GI+LFV ++ Q LIE TA+D
Sbjct: 1 MEPYIFGNRLGQDIIDLEQTALNLQLALNFTAHVAYRKGIILFVSRNRQFCHLIENTARD 60
Query: 150 CQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVG 209
C E+AHTR+++ G+ TN++ LF RLPDL+I +TL V EP+ A+ +AAKM IPTVG
Sbjct: 61 CGEYAHTRYFKGGLLTNAQLLFGPTVRLPDLIIFMHTLNNVFEPHVAVRDAAKMNIPTVG 120
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEVQ 266
IVD+NCNP LITYP+PGNDD+P AI +C++F+TAI + K+ K+ ++ L Q Q
Sbjct: 121 IVDTNCNPCLITYPIPGNDDSPQAIHLFCKLFRTAITRAKE-KRRQMEALHRLQSSQ 176
>gi|268554726|ref|XP_002635350.1| Hypothetical protein CBG01521 [Caenorhabditis briggsae]
Length = 257
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 138/215 (64%), Gaps = 4/215 (1%)
Query: 48 EPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLD 107
+P V L++ D F LV V +MF A++H GHKIG+++ MK +YG R G +FDLD
Sbjct: 45 KPFVSASLQHEDLFNFEKLVHVDEMFKARLHYGHKIGTVNNNMKWALYGERLGVCVFDLD 104
Query: 108 QSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS 167
+ + L ALNFVAH+A R G++LFV + +EK A++ +++H R W+ G TN+
Sbjct: 105 ITKQYLVRALNFVAHVAMRGGMILFVTSNRDTMFDVEKAAEEVGQYSHVRKWQSGTLTNT 164
Query: 168 EKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGN 227
+L A RLPD V +TLT++ E +PAI EAAKM IPT+G+VDSN +P +TY +P N
Sbjct: 165 RQLLGASVRLPDAVFFLSTLTSLGENHPAIIEAAKMTIPTIGVVDSNSDPAYLTYLIPAN 224
Query: 228 DDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
DDTP + +Y ++FK AI KG QD K L ++
Sbjct: 225 DDTPQSTEYLLRMFKEAIRKG----QDERKRLQQR 255
>gi|308496805|ref|XP_003110590.1| hypothetical protein CRE_05534 [Caenorhabditis remanei]
gi|308243931|gb|EFO87883.1| hypothetical protein CRE_05534 [Caenorhabditis remanei]
Length = 261
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 145/231 (62%), Gaps = 10/231 (4%)
Query: 33 PLPSTSN------TESKDTSQ----EPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHK 82
P PSTS+ T K T Q +P V L++ D F LV V +MF A++H GHK
Sbjct: 25 PTPSTSSSVPDRATLEKGTVQPTVLKPFVSASLQHEDLFNFEKLVHVDEMFKARIHYGHK 84
Query: 83 IGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLL 142
+G+++ MK +YG R G +FDLD + + L ALNFVAH++ R G++LFV +
Sbjct: 85 VGTVNNNMKWALYGERLGVCLFDLDITKQYLVRALNFVAHVSMRGGMILFVTSNRDTMFD 144
Query: 143 IEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
+EK A++ +++H R W+ G TN+ +L A RLPD V +TLT++ E +PAI EAAK
Sbjct: 145 VEKAAEEVGQYSHVRKWQSGTLTNTRQLLGASVRLPDAVCFLSTLTSLGENHPAIIEAAK 204
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
M IPT+G+VDSN +P +TY VP NDDTP + +Y ++FK A+ +G+ ++
Sbjct: 205 MAIPTIGVVDSNSDPAYLTYLVPANDDTPQSTEYLLRMFKEAVRRGQDERK 255
>gi|391346832|ref|XP_003747672.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like
[Metaseiulus occidentalis]
Length = 255
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 137/209 (65%), Gaps = 4/209 (1%)
Query: 49 PEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQ 108
P+ LR D F+V++LV + +M + ++HLGHK L+ MKP+IYG R Q+I DL+Q
Sbjct: 40 PKAYALLREPDAFKVKDLVSISEMMENRMHLGHKKTLLNPFMKPFIYGSRFDQLIIDLEQ 99
Query: 109 SAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSE 168
S E + ALNFVAHIAY DGI+L + + + + +EK A +C+EFAH R W QGM TN
Sbjct: 100 SREHMVKALNFVAHIAYNDGIILLISRHNETAHEVEKCAMECKEFAHVRPWYQGMLTNCG 159
Query: 169 KLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGND 228
F RLPDL + T + A E AK+ IP+VG+VD++ +P LITYPVPGND
Sbjct: 160 TSFGTEIRLPDLGLFITTRGS----QTAANEFAKLMIPSVGVVDTDTDPRLITYPVPGND 215
Query: 229 DTPSAIQYYCQVFKTAILKGKKAKQDTLK 257
D+ I+YY ++FK AIL+GK+ ++ L+
Sbjct: 216 DSTETIRYYIRLFKEAILRGKERRKRDLE 244
>gi|196000004|ref|XP_002109870.1| hypothetical protein TRIADDRAFT_21033 [Trichoplax adhaerens]
gi|190587994|gb|EDV28036.1| hypothetical protein TRIADDRAFT_21033 [Trichoplax adhaerens]
Length = 242
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 135/202 (66%), Gaps = 5/202 (2%)
Query: 53 NPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAEL 112
NPL + D+F VR L +K +FDA VHLGHK G + MK YIYG R G I DL+++
Sbjct: 21 NPLAHKDFFDVRQLYSIKSLFDAGVHLGHKTGVWNPLMKQYIYGDRHGNHIIDLNETDRH 80
Query: 113 LRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFR 172
L ALN +HIAYR G++LFV Q L++KTA++CQEF + WR G+ TN+ KL
Sbjct: 81 LFLALNVTSHIAYRKGVILFVCCRPQFQHLVQKTARECQEFFVIQRWRGGILTNAHKLL- 139
Query: 173 AVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPS 232
V RLPDL+I + + AI E+A+ IP++GIVD++CNPNLITYP+ GNDD+ S
Sbjct: 140 PVPRLPDLIIFLSVPYNM----DAIRESAQANIPSIGIVDTDCNPNLITYPIAGNDDSLS 195
Query: 233 AIQYYCQVFKTAILKGKKAKQD 254
+++ YC++F TAIL K +Q+
Sbjct: 196 SLELYCRLFSTAILNAKVQRQN 217
>gi|290462943|gb|ADD24519.1| 28S ribosomal protein S2, mitochondrial [Lepeophtheirus salmonis]
Length = 232
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 134/205 (65%), Gaps = 1/205 (0%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
P DYF V +L V+D+F A+VH+GH GS+ MKP+IYG R G I DLDQ+A L
Sbjct: 26 PTSVEDYFGVNSLFSVEDLFRARVHMGHVTGSIHPHMKPFIYGTRFGSTIIDLDQTALHL 85
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
R+ALNF+AHIA R GI+LFV + Q + E A E+AH R W +F + ++
Sbjct: 86 REALNFLAHIANRKGIILFVCRQPQFVHMTEVAALSSGEYAHCRTWSHKLFGDPRASYKC 145
Query: 174 VTRLPDLVILTNTLTTV-LEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPS 232
RLPD VI+ +T V + + A+ +AAK IPT+GIVDS+CNPN+I+YP+PGNDD+
Sbjct: 146 EVRLPDAVIMVHTKNGVKYDEHGAVVDAAKAGIPTIGIVDSDCNPNIISYPIPGNDDSIP 205
Query: 233 AIQYYCQVFKTAILKGKKAKQDTLK 257
+I+ Y +F+ AIL GK+ + + L+
Sbjct: 206 SIRLYLDLFQKAILLGKEKRNENLR 230
>gi|449478286|ref|XP_004174403.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like
[Taeniopygia guttata]
Length = 202
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 128/179 (71%)
Query: 90 MKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQD 149
M+PY +G R Q I DLDQ+ + L+ ALNF AH+AYR GI+LFV + Q L+E TA+
Sbjct: 24 MEPYHFGCRLDQDIIDLDQTMQHLQLALNFTAHVAYRGGIILFVSRRRQFCHLVESTARA 83
Query: 150 CQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVG 209
C E+AHTR+W+ G+ TN+ LF RLPDL+I +TL V EP+ AI +AAKM IPTVG
Sbjct: 84 CGEYAHTRYWQGGLLTNAHILFGPGVRLPDLLIFLSTLNNVFEPHVAIRDAAKMNIPTVG 143
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEVQHN 268
+VD+NCNP LI+YPVPGNDD+P+A++ YC++F+ I++ K ++ + + +++ + N
Sbjct: 144 VVDTNCNPCLISYPVPGNDDSPAAMELYCKLFRMTIIRAKDKRRQSEAVEELQRKAEGN 202
>gi|17564586|ref|NP_505180.1| Protein MRPS-2 [Caenorhabditis elegans]
gi|373220279|emb|CCD72915.1| Protein MRPS-2 [Caenorhabditis elegans]
Length = 264
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 136/209 (65%)
Query: 45 TSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIF 104
T +P V L++ D F +V + +MF A++H GHK+G+++ MK +YG R G +F
Sbjct: 50 TVLKPFVSASLQHEDLFNFEKMVHIDEMFKARLHYGHKVGTVNNNMKWALYGERLGVCLF 109
Query: 105 DLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMF 164
DLD + + L ALNFVAH++ R G++LFV + +EK A + +++H R W+ G
Sbjct: 110 DLDITKKYLVRALNFVAHVSLRGGMILFVTSNRDTMFDVEKAADEVGQYSHVRKWQSGTL 169
Query: 165 TNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPV 224
TN+ +L A RLPD V +TLT++ E +PAI EAAKM IPT+G+VDSN +P +TY V
Sbjct: 170 TNTRQLLGASVRLPDAVCFLSTLTSLGENHPAIVEAAKMAIPTIGVVDSNSDPAYLTYLV 229
Query: 225 PGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P NDDTP + +Y ++FK A+ KG++ ++
Sbjct: 230 PANDDTPQSTEYLLRMFKEAVRKGQEERK 258
>gi|241862476|ref|XP_002416382.1| ribosomal protein, putative [Ixodes scapularis]
gi|215510596|gb|EEC20049.1| ribosomal protein, putative [Ixodes scapularis]
Length = 173
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/172 (54%), Positives = 121/172 (70%), Gaps = 1/172 (0%)
Query: 48 EPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLD 107
+P +PL + DYF V L+ V+++F+A+ HLGHK G L++ MKPYI+G R G I DLD
Sbjct: 3 KPRTLSPLEHADYFGVSKLISVRELFEARAHLGHKEGLLNDLMKPYIFGSRLGHHIIDLD 62
Query: 108 QSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS 167
Q+ L ALNF AHIAYRDGI+LFV ++ Q S ++E+TA+ C EFAHTR+WR G+F NS
Sbjct: 63 QTVPHLFRALNFAAHIAYRDGIILFVTRNQQTSHMVEETAKACGEFAHTRWWRPGLFPNS 122
Query: 168 EKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNL 219
E+ F VTRLPDLV+L +TL TV E + E A+M IPT NCNP+L
Sbjct: 123 ERQFGTVTRLPDLVVLLSTLDTVFEEHLGRAECARMLIPTRP-CGHNCNPSL 173
>gi|221119128|ref|XP_002156548.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Hydra
magnipapillata]
Length = 244
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 130/200 (65%), Gaps = 2/200 (1%)
Query: 55 LRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLR 114
L D+F V+ LV +K +FD++VHLGH G+ + +PYIYG R Q+I DL+Q+ E L
Sbjct: 45 LEQDDFFDVKKLVDLKKLFDSRVHLGHHEGTWNPLTRPYIYGQRSTQLIIDLNQTVECLN 104
Query: 115 DALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAV 174
ALN ++HI Y GI+LF+ + + LI+KTA+DC+E+ T W++G+FTNS L
Sbjct: 105 CALNVLSHIVYNQGIILFISMNPRFDYLIQKTARDCEEYFITHGWQKGLFTNSP-LKLGT 163
Query: 175 TRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAI 234
+LPDLVI N + + AI EA+ IP +GIVD++C+P LITYP+P NDDT ++
Sbjct: 164 QKLPDLVIAFNN-SRFEKTRDAIIEASMCNIPVIGIVDTDCDPRLITYPIPANDDTYDSV 222
Query: 235 QYYCQVFKTAILKGKKAKQD 254
+ C +FK AIL K + +
Sbjct: 223 SHLCDIFKQAILNAKLKRNE 242
>gi|312372056|gb|EFR20103.1| hypothetical protein AND_20652 [Anopheles darlingi]
Length = 418
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/163 (53%), Positives = 117/163 (71%), Gaps = 4/163 (2%)
Query: 46 SQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFD 105
S P PL HD + NL V+D+F A+VHLGHK G+L++ MK Y+YG R G + D
Sbjct: 193 SSWPIENKPL--HD--ECGNLFTVEDLFKARVHLGHKEGTLNDNMKGYLYGSRLGHCVID 248
Query: 106 LDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFT 165
LD++AE LR ALN AHIA+RDGI+LF ++A N+ +EKTA++C E+AHTR+WR G+FT
Sbjct: 249 LDKTAEHLRMALNIAAHIAFRDGIILFFNRNALNAHQVEKTAKECGEYAHTRYWRGGVFT 308
Query: 166 NSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTV 208
N++ F AVTRLPDL I NT+ VL+ + A+ +AAKM IPT+
Sbjct: 309 NAKVQFGAVTRLPDLCIFFNTMNNVLDMHTAVRDAAKMNIPTI 351
>gi|170587222|ref|XP_001898377.1| 28S ribosomal protein S2, mitochondrial [Brugia malayi]
gi|158594203|gb|EDP32789.1| 28S ribosomal protein S2, mitochondrial, putative [Brugia malayi]
Length = 229
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 124/206 (60%), Gaps = 25/206 (12%)
Query: 51 VPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSA 110
V + L+ D+F + ++ + D+F A+VH GHK ++
Sbjct: 47 VDDILKERDHFGFKKMITIDDLFHARVHYGHK-------------------------KTR 81
Query: 111 ELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKL 170
E L ALNFVAH+A R G+ LF+ N L++E+ A + EFAH R W++ N++ L
Sbjct: 82 ECLITALNFVAHLAMRGGMFLFITTERNNMLMVERKALEINEFAHVRGWKEDTLLNAKAL 141
Query: 171 FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDT 230
F A RLPD +I +TLT+VLE +PA+ EAAKM IPT+GIVDSN +P ITYP+PGNDD+
Sbjct: 142 FGAPVRLPDTIIFLSTLTSVLETHPAVREAAKMVIPTIGIVDSNADPTNITYPIPGNDDS 201
Query: 231 PSAIQYYCQVFKTAILKGKKAKQDTL 256
S++QY+ F A+ GK+A++ L
Sbjct: 202 VSSVQYFMDCFVKAVKVGKEARRSLL 227
>gi|56754323|gb|AAW25349.1| SJCHGC05092 protein [Schistosoma japonicum]
Length = 200
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 112/159 (70%)
Query: 51 VPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSA 110
+ NPL DYF +++LV V D+F A+VH+GH+ ++ MKPYI+G RQG I DLDQ+
Sbjct: 40 ISNPLSCPDYFGLKSLVSVTDLFQARVHMGHRSVLRNDYMKPYIFGCRQGIDIIDLDQTC 99
Query: 111 ELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKL 170
LL DALNF AHIAYR GI+LFV Q+ Q L+E+TA++ E+++ R W G+FTNS +
Sbjct: 100 SLLFDALNFTAHIAYRQGIILFVYQNKQMLPLVERTAENVGEYSYCRKWEGGVFTNSSDV 159
Query: 171 FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVG 209
F RLPDLV+L +T ++ P+ A+ +AAKM IPTVG
Sbjct: 160 FHDSVRLPDLVLLLSTCNSISRPHSAVRDAAKMLIPTVG 198
>gi|156353059|ref|XP_001622894.1| predicted protein [Nematostella vectensis]
gi|156209527|gb|EDO30794.1| predicted protein [Nematostella vectensis]
Length = 196
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 122/198 (61%), Gaps = 2/198 (1%)
Query: 55 LRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLR 114
L D+F V LV ++D+F A VH GH G + MKPY+YG R+ I DL+Q+ + R
Sbjct: 1 LNQQDFFDVHQLVSLRDLFVAGVHYGHHEGCWNPLMKPYLYGTREHFHIIDLNQTIKHFR 60
Query: 115 DALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAV 174
AL+ + H YR G VLF+ Q L + A+D E+ T+ WR G FTNS +
Sbjct: 61 LALDVLCHTVYRGGKVLFISCKPQFEELTQSLARDSGEYFVTQRWRGGTFTNSYMVLET- 119
Query: 175 TRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAI 234
LPDLV+ + + ++ A+ E A IP++GIVDS+CNPNLI YP+PGNDD PSA+
Sbjct: 120 RNLPDLVVFLH-VPSLGRNALAVKETAMCNIPSIGIVDSDCNPNLIMYPIPGNDDMPSAV 178
Query: 235 QYYCQVFKTAILKGKKAK 252
Q YC++FK+A+L K+ +
Sbjct: 179 QMYCRIFKSAVLTAKEKR 196
>gi|340381065|ref|XP_003389042.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like [Amphimedon
queenslandica]
Length = 234
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 136/231 (58%), Gaps = 6/231 (2%)
Query: 20 YLFKKLSTVPNVDPLPSTSNTESK-DTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVH 78
+L L + P + +NT +K D S E +D F + +V V+ +F+A++H
Sbjct: 3 FLRALLKSSPALRLCRFCTNTVAKVDISFEENSNTASDIYDKFNINEIVTVRKLFEARMH 62
Query: 79 LGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQ 138
LGHK G ++ MK YI+G+R+ IFDLD ++E L+ AL IA + G++LFV +Q
Sbjct: 63 LGHKHGVSNQLMKDYIWGLREKIQIFDLDITSEHLKRALLVAGLIAEKKGVILFVNSRSQ 122
Query: 139 NSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIG 198
LI TA DC E+ + WR G FTNS+ + + RLPDLV+L N T V AI
Sbjct: 123 FDRLIRDTATDCGEYYLSPTWRPGTFTNSQVMLKTC-RLPDLVVLLNWHTNV----QAIR 177
Query: 199 EAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
E+ IPTV + DS+ +P L+TY VPGNDDTPS+++++C+ F+ I K
Sbjct: 178 ESIMCNIPTVCLTDSDSDPRLVTYAVPGNDDTPSSVKFFCEAFRDVIRNAK 228
>gi|426259033|ref|XP_004023106.1| PREDICTED: 28S ribosomal protein S2, mitochondrial-like, partial
[Ovis aries]
Length = 164
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 96/130 (73%)
Query: 124 AYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVIL 183
A+R GI+LFV ++ Q S LIE TA+ C E+AHTR+++ G+ TN+ L RLPDLVI
Sbjct: 1 AFRGGIILFVSRARQFSHLIESTARSCGEYAHTRYFKGGLLTNAPLLLGPRVRLPDLVIF 60
Query: 184 TNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKT 243
+TL V EP+ A+ +AAKM IPTVGIVD+NCNP LITYPVPGND +P A+Q +CQ+F+T
Sbjct: 61 LHTLNNVFEPHVAVRDAAKMNIPTVGIVDTNCNPCLITYPVPGNDASPPAVQLFCQLFQT 120
Query: 244 AILKGKKAKQ 253
+ + K+ Q
Sbjct: 121 VVTRAKEKLQ 130
>gi|320164687|gb|EFW41586.1| mitochondrial ribosomal protein subunit S2 [Capsaspora owczarzaki
ATCC 30864]
Length = 960
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 109/198 (55%), Gaps = 5/198 (2%)
Query: 61 FQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFV 120
F + V ++ +FDA VHLGHK G + YI+G R G I DL+Q+ LR A +
Sbjct: 751 FLSEHSVTLRQLFDAGVHLGHKAGCHNVFANSYIFGERDGIHIIDLEQTIVALRRACRVL 810
Query: 121 AHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL 180
HIAY++G++LFVG +++ L+ +TA E+ W G TN A+ R PDL
Sbjct: 811 KHIAYQNGVILFVGGRSKHKQLVRETAMSVGEYYIANKWMPGTLTNPMSTLGAL-RQPDL 869
Query: 181 VILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQV 240
++LT + + EA +PT+GI D++C+P +TY +P NDD+P ++ V
Sbjct: 870 IVLTCMPMS----SQVAREANLANVPTIGIADTDCDPRQVTYSIPANDDSPRSMALLLNV 925
Query: 241 FKTAILKGKKAKQDTLKL 258
+ AI +GK +Q L L
Sbjct: 926 MRMAIEEGKTKRQAGLPL 943
>gi|167515424|ref|XP_001742053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778677|gb|EDQ92291.1| predicted protein [Monosiga brevicollis MX1]
Length = 233
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 108/199 (54%), Gaps = 15/199 (7%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V + ++FDA+VHLGHK G + +M+PYIY I DL+ + L AL I+
Sbjct: 37 VTIDELFDARVHLGHKRGMWNPKMEPYIYTTLADSHIIDLNVTKAHLEHALELTRRISAD 96
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------SEKLFRAVT----- 175
G+VLFVG Q LI A+ C E+ TR W G TN S +L V
Sbjct: 97 GGVVLFVGGRPQFEGLIRHEARRCGEYFVTRKWIGGTLTNNTEARTSHRLVHGVQTLGGL 156
Query: 176 RLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQ 235
R+PDL++ + + + EA IP+VGI+D++ +P+ +TY VPGNDDT AI+
Sbjct: 157 RMPDLILFFCVPVSKV----GVKEALDCDIPSVGIIDTDGDPDGVTYVVPGNDDTTQAIE 212
Query: 236 YYCQVFKTAILKGKKAKQD 254
+Y + F A+L GK+A D
Sbjct: 213 FYVRKFADAVLAGKEAISD 231
>gi|91206097|ref|YP_538452.1| 30S ribosomal protein S2 [Rickettsia bellii RML369-C]
gi|157826470|ref|YP_001495534.1| 30S ribosomal protein S2 [Rickettsia bellii OSU 85-389]
gi|123388083|sp|Q1RH01.1|RS2_RICBR RecName: Full=30S ribosomal protein S2
gi|166226747|sp|A8GUK1.1|RS2_RICB8 RecName: Full=30S ribosomal protein S2
gi|91069641|gb|ABE05363.1| 30S ribosomal protein S2 [Rickettsia bellii RML369-C]
gi|157801774|gb|ABV78497.1| 30S ribosomal protein S2 [Rickettsia bellii OSU 85-389]
Length = 291
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 108/226 (47%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V VKD+ DA VH GHK + +M PYIYG R I DL Q+A L+ ALN +
Sbjct: 7 VNVKDLLDAGVHFGHKTSRWNPKMAPYIYGERDEVHIIDLRQTAALMNVALNAIYETVKN 66
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
DG VLFV Q S +I + A+ C ++ W GM TN + + ++ +L
Sbjct: 67 DGKVLFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTISGSIEKLNKLEQTLEN 126
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PDL+++ +T + + AI EA +
Sbjct: 127 EEACIGYTKKEILDMNRKKDKLLLSLAGIRELHSKPDLIVIIDT----NKEHIAISEAVR 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ IP V +VD+N NP+ I YP+PGNDD +I++YC +F A L+G
Sbjct: 183 LDIPIVAVVDTNSNPDHIDYPIPGNDDAIRSIRFYCSLFADAALQG 228
>gi|402819248|ref|ZP_10868817.1| hypothetical protein IMCC14465_00510 [alpha proteobacterium
IMCC14465]
gi|402511952|gb|EJW22212.1| hypothetical protein IMCC14465_00510 [alpha proteobacterium
IMCC14465]
Length = 295
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 105/223 (47%), Gaps = 47/223 (21%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M PYI+G R G I DL Q+ LL AL V G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMAPYIFGDRNGIHIIDLAQTVPLLHQALVAVRDTVAAGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q + +I +TAQ C ++ W G TN + + ++ RL
Sbjct: 68 RVLFVGTKRQATEVIARTAQQCAQYYMNTRWLGGTLTNWKTISNSIKRLRELENMLEDEA 127
Query: 178 --------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCI 205
PDL+I+ +T + AI EA K+ I
Sbjct: 128 STGFTKKEILNLTRERNKLELAIGGIKDMGGLPDLMIVIDTNKESI----AIAEAHKLGI 183
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
P + I+DSNCNP+ I+YPVPGNDD AI+ YC +F A++ G
Sbjct: 184 PVIAILDSNCNPDGISYPVPGNDDATRAIELYCSLFSGAVIDG 226
>gi|157825245|ref|YP_001492965.1| 30S ribosomal protein S2 [Rickettsia akari str. Hartford]
gi|166226746|sp|A8GM32.1|RS2_RICAH RecName: Full=30S ribosomal protein S2
gi|157799203|gb|ABV74457.1| 30S ribosomal protein S2 [Rickettsia akari str. Hartford]
Length = 295
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 108/226 (47%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K++ DA VH GHK + +M YIYG R I DL QSA L+ ALN + +
Sbjct: 7 VNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSAALMSVALNAIYETVKK 66
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
DG VLFV Q S +I + A+ C ++ W GM TN
Sbjct: 67 DGKVLFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLEKTLEN 126
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + PDL+++ +T + + AI EA K
Sbjct: 127 AEALIGYTKKEILDMSRKKEKLLLSLAGIRNLNSKPDLLVVIDT----NKEHIAINEAVK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ +P V +VD+N NP+ + YP+PGNDD+ +I+ YC++F A L+G
Sbjct: 183 LNVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCRLFADAALQG 228
>gi|383501062|ref|YP_005414421.1| 30S ribosomal protein S2 [Rickettsia australis str. Cutlack]
gi|378932073|gb|AFC70578.1| 30S ribosomal protein S2 [Rickettsia australis str. Cutlack]
Length = 295
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 107/226 (47%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K++ DA VH GHK + +M YIYG R I DL QSA L+ ALN + +
Sbjct: 7 VNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSAALMSVALNTIYETVKK 66
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
DG +LFV Q S +I + A+ C ++ W GM TN
Sbjct: 67 DGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLEKTLEN 126
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + PDL+++ +T + + AI EA K
Sbjct: 127 EEALMGYTKKEILDMSRKKEKLLLSLAGIRNLNSKPDLLVVIDT----NKEHIAINEAVK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ +P V +VD+N NP+ I YP+PGNDD+ +I+ YC +F A L+G
Sbjct: 183 LNVPIVAVVDTNSNPDNIDYPIPGNDDSIRSIRLYCSLFADAALQG 228
>gi|67458461|ref|YP_246085.1| 30S ribosomal protein S2 [Rickettsia felis URRWXCal2]
gi|75537069|sp|Q4UND8.1|RS2_RICFE RecName: Full=30S ribosomal protein S2
gi|67003994|gb|AAY60920.1| 30S ribosomal protein S2 [Rickettsia felis URRWXCal2]
Length = 295
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 107/226 (47%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K++ DA VH GHK + +M YIYG R I DL QSA L+ ALN + +
Sbjct: 7 VNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSAALMSVALNTIYETVKK 66
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
DG +LFV Q S +I + A+ C ++ W GM TN
Sbjct: 67 DGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLEKTLEN 126
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + PDL+++ +T + + AI EA K
Sbjct: 127 EEALMGYTKKEILDMSRKKEKLLLSLAGIRNLNSKPDLLVVIDT----NKEHIAINEAVK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ +P V +VD+N NP+ + YP+PGNDD+ +I+ YC +F A L+G
Sbjct: 183 LNVPIVAVVDTNSNPDNVNYPIPGNDDSIRSIRLYCSLFADAALQG 228
>gi|402704093|ref|ZP_10852072.1| 30S ribosomal protein S2 [Rickettsia helvetica C9P9]
Length = 295
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 108/226 (47%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K++ DA VH GHK + +M YIYG R I DL QSA L+ ALN + +
Sbjct: 7 VNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSAALMSVALNAIYETVKK 66
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
DG +LFV Q S +I + A+ C ++ W GM TN + + ++ +L
Sbjct: 67 DGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLEKTLES 126
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PDL+++ +T + + AI EA K
Sbjct: 127 EEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDT----NKEHIAINEAVK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ IP V +VD+N NP+ + YP+PGNDD+ +I+ YC +F A L+G
Sbjct: 183 LNIPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFAGAALQG 228
>gi|51473262|ref|YP_067019.1| 30S ribosomal protein S2 [Rickettsia typhi str. Wilmington]
gi|383752036|ref|YP_005427136.1| 30S ribosomal protein S2 [Rickettsia typhi str. TH1527]
gi|383842871|ref|YP_005423374.1| 30S ribosomal protein S2 [Rickettsia typhi str. B9991CWPP]
gi|61215503|sp|Q68XV5.1|RS2_RICTY RecName: Full=30S ribosomal protein S2
gi|51459574|gb|AAU03537.1| 30S ribosomal protein S2 [Rickettsia typhi str. Wilmington]
gi|380758679|gb|AFE53914.1| 30S ribosomal protein S2 [Rickettsia typhi str. TH1527]
gi|380759518|gb|AFE54752.1| 30S ribosomal protein S2 [Rickettsia typhi str. B9991CWPP]
Length = 295
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 111/222 (50%), Gaps = 40/222 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K++ DA VH GHK + +M YIYG R I DL QSA L+ ALN + +
Sbjct: 7 INIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSAALMSVALNAIYETVKK 66
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS----------EKLFRA--- 173
DG +LFV Q S +I + A+ C ++ W GM TN EKL +
Sbjct: 67 DGKILFVSTKIQASDIIAEYAEKCGQYYVNNRWLGGMLTNWKTIACSIEKLEKLEKTLES 126
Query: 174 --------------VTRLPDLVILT-------NT---LTTVLEPNP---AIGEAAKMCIP 206
++R D ++L+ N+ L V++ N AI EA K+ IP
Sbjct: 127 EETRVCYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDTNKEHIAINEAVKLNIP 186
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
V +VD+N NP+ I YP+PGNDD+ +I+ YC +F A L+G
Sbjct: 187 IVAVVDTNSNPDNINYPIPGNDDSIRSIRLYCSLFADAALQG 228
>gi|326437226|gb|EGD82796.1| hypothetical protein PTSG_03446 [Salpingoeca sp. ATCC 50818]
Length = 366
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 110/195 (56%), Gaps = 7/195 (3%)
Query: 56 RYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRD 115
R+ + + ++D+ A+VHLGH G + +M +IY R G + DLD++ LL+
Sbjct: 42 RWLPHVRTATTFSMEDLVQARVHLGHTHGVNNPKMDDFIYEKRHGLTVLDLDKTVPLLQR 101
Query: 116 ALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVT 175
AL+ IA R G++LFV Q ++ +TA C E+ ++ W G TN+ ++ +
Sbjct: 102 ALDITREIASRGGVILFVSNRPQFETMVRRTATSCGEYFVSKKWVGGCLTNTYRVLGGM- 160
Query: 176 RLPDLVILTNTLTTVLEPNPAIGEAAKMC-IPTVGIVDSNCNPNLITYPVPGNDDTPSAI 234
+LPDLV+ + L N A + + C IP VG+VD++C+P+ + YPVP NDD+ +++
Sbjct: 161 QLPDLVLFFS-----LPVNQAALKEVRDCMIPCVGLVDTDCDPSSVDYPVPANDDSETSV 215
Query: 235 QYYCQVFKTAILKGK 249
+F A+ +GK
Sbjct: 216 NLMLDLFAGAVNEGK 230
>gi|15606996|ref|NP_214378.1| 30S ribosomal protein S2 [Aquifex aeolicus VF5]
gi|7388166|sp|O67809.1|RS2_AQUAE RecName: Full=30S ribosomal protein S2
gi|2984239|gb|AAC07767.1| ribosomal protein S02 [Aquifex aeolicus VF5]
Length = 274
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 117/241 (48%), Gaps = 47/241 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K++ +A VH GH + +M PYIYGVR G I DL+++ +L DA +FV+ +
Sbjct: 3 VVSMKELLEAGVHFGHSKSRWNPKMAPYIYGVRHGIHIIDLNKTIVMLEDAYHFVSDVIA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+ G +LFVG Q +I++ A+ C F W G+ TN
Sbjct: 63 QGGEILFVGTKKQAKDIIKEEAERCGAFYVNERWVGGLLTNFQTVRKSIMKLQTLERMEE 122
Query: 167 ------------------SEKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + +LPD++ + +T+ + A+ EA K
Sbjct: 123 DGIFDVLPKKEVRNLRRKMEKLRKLYNGIRDMKKLPDVIWIVDTVREKI----AVSEARK 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+ IP V I DSNC+P +I Y +PGNDD +I+ A+L+GK+ ++ +++ K
Sbjct: 179 LGIPIVAIADSNCDPTVIDYTIPGNDDAIKSIKLLTSKIADAVLEGKQRRESAEEVVPTK 238
Query: 263 Q 263
+
Sbjct: 239 E 239
>gi|395741166|ref|XP_002820416.2| PREDICTED: 28S ribosomal protein S2, mitochondrial, partial [Pongo
abelii]
Length = 129
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 76/103 (73%)
Query: 156 TRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNC 215
TR+++ GM TN+ LF RLPDL+I +TL + EP+ A+ +AAKM IPTVGIVD+NC
Sbjct: 1 TRYFKGGMLTNARLLFGPTVRLPDLIIFLHTLNNIFEPHVAVRDAAKMNIPTVGIVDTNC 60
Query: 216 NPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
NP LITYPVPGNDD+P A+ YC++F+TAI + K+ ++ L
Sbjct: 61 NPCLITYPVPGNDDSPLAVHLYCRLFQTAITRAKEKRRQVEAL 103
>gi|15603964|ref|NP_220479.1| 30S ribosomal protein S2 [Rickettsia prowazekii str. Madrid E]
gi|383486933|ref|YP_005404613.1| 30S ribosomal protein S2 [Rickettsia prowazekii str. GvV257]
gi|383487509|ref|YP_005405188.1| 30S ribosomal protein S2 [Rickettsia prowazekii str. Chernikova]
gi|383488355|ref|YP_005406033.1| 30S ribosomal protein S2 [Rickettsia prowazekii str. Katsinyian]
gi|383489198|ref|YP_005406875.1| 30S ribosomal protein S2 [Rickettsia prowazekii str. Dachau]
gi|383499333|ref|YP_005412694.1| 30S ribosomal protein S2 [Rickettsia prowazekii str. BuV67-CWPP]
gi|383500173|ref|YP_005413533.1| 30S ribosomal protein S2 [Rickettsia prowazekii str. RpGvF24]
gi|386081914|ref|YP_005998491.1| 30S ribosomal protein S2 [Rickettsia prowazekii str. Rp22]
gi|6226099|sp|Q9ZE61.1|RS2_RICPR RecName: Full=30S ribosomal protein S2
gi|3860655|emb|CAA14556.1| 30S RIBOSOMAL PROTEIN S2 (rpsB) [Rickettsia prowazekii str. Madrid
E]
gi|292571678|gb|ADE29593.1| 30S ribosomal protein S2 [Rickettsia prowazekii str. Rp22]
gi|380757298|gb|AFE52535.1| 30S ribosomal protein S2 [Rickettsia prowazekii str. GvV257]
gi|380757870|gb|AFE53106.1| 30S ribosomal protein S2 [Rickettsia prowazekii str. RpGvF24]
gi|380760388|gb|AFE48910.1| 30S ribosomal protein S2 [Rickettsia prowazekii str. Chernikova]
gi|380761234|gb|AFE49755.1| 30S ribosomal protein S2 [Rickettsia prowazekii str. Katsinyian]
gi|380762079|gb|AFE50599.1| 30S ribosomal protein S2 [Rickettsia prowazekii str. BuV67-CWPP]
gi|380762921|gb|AFE51440.1| 30S ribosomal protein S2 [Rickettsia prowazekii str. Dachau]
Length = 296
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 108/226 (47%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K++ DA VH GHK + +M YIYG R I DL QSA L+ ALN + +
Sbjct: 7 INIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSAALMSVALNAIYETVKK 66
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
DG +LFV Q S +I + A+ C ++ W GM TN + + ++ +L
Sbjct: 67 DGKILFVSTKIQASDIIAEYAEKCGQYYVNNRWLGGMLTNWKTIACSIEKLEKLEKTLES 126
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PDL+++ +T + + AI EA K
Sbjct: 127 EEARICYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDT----NKEHIAINEAVK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ IP V +VD+N NP+ + YP+PGNDD+ +I+ YC +F A L+G
Sbjct: 183 LNIPVVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQG 228
>gi|157803269|ref|YP_001491818.1| 30S ribosomal protein S2 [Rickettsia canadensis str. McKiel]
gi|379022480|ref|YP_005299141.1| 30S ribosomal protein S2 [Rickettsia canadensis str. CA410]
gi|166226748|sp|A8EXF0.1|RS2_RICCK RecName: Full=30S ribosomal protein S2
gi|157784532|gb|ABV73033.1| 30S ribosomal protein S2 [Rickettsia canadensis str. McKiel]
gi|376323418|gb|AFB20659.1| 30S ribosomal protein S2 [Rickettsia canadensis str. CA410]
Length = 295
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 108/226 (47%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K++ DA VH GHK + +M YIYG R I DL QSA L+ ALN + +
Sbjct: 7 VNIKELLDAGVHFGHKTSRWNPKMGSYIYGERDDVHIIDLRQSAVLMSVALNAIYETVKK 66
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
DG +LFV Q S +I + A+ C ++ W GM TN + + ++ +L
Sbjct: 67 DGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLEKTLGN 126
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PDL+++ +T + + AI EA K
Sbjct: 127 EEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDT----NKEHIAINEAVK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ +P V +VD+N NP+ + YP+PGNDD+ +I+ YC +F A L+G
Sbjct: 183 LNVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQG 228
>gi|383481055|ref|YP_005389970.1| 30S ribosomal protein S2 [Rickettsia rhipicephali str.
3-7-female6-CWPP]
gi|378933394|gb|AFC71897.1| 30S ribosomal protein S2 [Rickettsia rhipicephali str.
3-7-female6-CWPP]
Length = 293
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 107/226 (47%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K++ DA VH GHK + +M YIYG R I DL QS L+ ALN + +
Sbjct: 12 VNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYETVKK 71
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
DG +LFV Q S +I + A+ C ++ W GM TN + + ++ +L
Sbjct: 72 DGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKTLEN 131
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PDL+++ +T + + AI EA K
Sbjct: 132 EEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDT----NKEHIAINEAVK 187
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ +P V +VD+N NP+ + YP+PGNDD+ +I+ YC +F A L+G
Sbjct: 188 LNVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQG 233
>gi|157964148|ref|YP_001498972.1| 30S ribosomal protein S2 [Rickettsia massiliae MTU5]
gi|157843924|gb|ABV84425.1| 30S ribosomal protein S2 [Rickettsia massiliae MTU5]
Length = 312
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 107/226 (47%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K++ DA VH GHK + +M YIYG R I DL QS L+ ALN + +
Sbjct: 24 VNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYETVKK 83
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
DG +LFV Q S +I + A+ C ++ W GM TN + + ++ +L
Sbjct: 84 DGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKTLEN 143
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PDL+++ +T + + AI EA K
Sbjct: 144 EEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDT----NKEHIAINEAVK 199
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ +P V +VD+N NP+ + YP+PGNDD+ +I+ YC +F A L+G
Sbjct: 200 LNVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQG 245
>gi|239947073|ref|ZP_04698826.1| ribosomal protein S2 [Rickettsia endosymbiont of Ixodes scapularis]
gi|239921349|gb|EER21373.1| ribosomal protein S2 [Rickettsia endosymbiont of Ixodes scapularis]
Length = 295
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 107/226 (47%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K++ DA VH GHK + +M YIYG R I DL QSA L+ ALN + +
Sbjct: 7 VNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSAALMSVALNAIYETVKK 66
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
DG +LFV Q S +I + + C ++ W GM TN + + ++ +L
Sbjct: 67 DGKILFVSTKIQASDIIAEYTEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLEKTLES 126
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PDL+++ +T + + AI EA K
Sbjct: 127 EEALMGYTKKEIIDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDT----NKEHIAINEAVK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ +P V +VD+N NP+ + YP+PGNDD+ +I+ YC +F A L+G
Sbjct: 183 LNVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQG 228
>gi|379713169|ref|YP_005301507.1| 30S ribosomal protein S2 [Rickettsia massiliae str. AZT80]
gi|209573694|sp|A8F0I9.2|RS2_RICM5 RecName: Full=30S ribosomal protein S2
gi|376333815|gb|AFB31047.1| 30S ribosomal protein S2 [Rickettsia massiliae str. AZT80]
Length = 295
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 107/226 (47%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K++ DA VH GHK + +M YIYG R I DL QS L+ ALN + +
Sbjct: 7 VNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYETVKK 66
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
DG +LFV Q S +I + A+ C ++ W GM TN + + ++ +L
Sbjct: 67 DGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKTLEN 126
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PDL+++ +T + + AI EA K
Sbjct: 127 EEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDT----NKEHIAINEAVK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ +P V +VD+N NP+ + YP+PGNDD+ +I+ YC +F A L+G
Sbjct: 183 LNVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQG 228
>gi|383312102|ref|YP_005364903.1| 30S ribosomal protein S2 [Candidatus Rickettsia amblyommii str.
GAT-30V]
gi|378930762|gb|AFC69271.1| 30S ribosomal protein S2 [Candidatus Rickettsia amblyommii str.
GAT-30V]
Length = 295
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 107/226 (47%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K++ DA VH GHK + +M YIYG R I DL QS L+ ALN + +
Sbjct: 7 VNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYETVKK 66
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
DG +LFV Q S +I + A+ C ++ W GM TN + + ++ +L
Sbjct: 67 DGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKTLEN 126
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PDL+++ +T + + AI EA K
Sbjct: 127 EEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDT----NKEHIAINEAVK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ +P V +VD+N NP+ + YP+PGNDD+ +I+ YC +F A L+G
Sbjct: 183 LNVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQG 228
>gi|383482927|ref|YP_005391841.1| 30S ribosomal protein S2 [Rickettsia montanensis str. OSU 85-930]
gi|378935281|gb|AFC73782.1| 30S ribosomal protein S2 [Rickettsia montanensis str. OSU 85-930]
Length = 295
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 107/226 (47%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K++ DA VH GHK + +M YIYG R I DL QS L+ ALN + +
Sbjct: 7 VNIKELLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMGVALNAIYETVKK 66
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
DG +LFV Q S +I + A+ C ++ W GM TN + + ++ +L
Sbjct: 67 DGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKTLEN 126
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PDL+++ +T + + AI EA K
Sbjct: 127 EEALMGYTKKEILDMSRKKDKLLLSFAGIRNLNSKPDLLVVIDT----NKEHIAINEAVK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ +P V +VD+N NP+ + YP+PGNDD+ +I+ YC +F A L+G
Sbjct: 183 LNVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIKLYCSLFANAALQG 228
>gi|15892035|ref|NP_359749.1| 30S ribosomal protein S2 [Rickettsia conorii str. Malish 7]
gi|20139896|sp|Q92JF5.1|RS2_RICCN RecName: Full=30S ribosomal protein S2
gi|15619153|gb|AAL02650.1| 30S ribosomal protein S2 [Rickettsia conorii str. Malish 7]
Length = 295
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 106/226 (46%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K + DA VH GHK + +M YIYG R I DL QS L+ ALN + +
Sbjct: 7 VNIKALLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYETVKK 66
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
DG +LFV Q S +I + A+ C ++ W GM TN + + ++ +L
Sbjct: 67 DGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKTLEN 126
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PDL+++ +T + + AI EA K
Sbjct: 127 EEALMGYTKKEILNMSRKKDKLLLSLAGIRNLNSKPDLLVVIDT----NKEHIAINEAVK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ +P V +VD+N NP+ + YP+PGNDD+ AI+ YC +F A L+G
Sbjct: 183 LNVPIVAVVDTNSNPDNVDYPIPGNDDSIRAIRLYCSLFADAALQG 228
>gi|341583343|ref|YP_004763834.1| 30S ribosomal protein S2 [Rickettsia heilongjiangensis 054]
gi|340807569|gb|AEK74157.1| 30S ribosomal protein S2 [Rickettsia heilongjiangensis 054]
Length = 295
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K + DA VH GHK + +M YIYG R I DL QS L+ ALN + +
Sbjct: 7 VNIKALLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYETVKK 66
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
DG +LFV Q S +I + A+ C ++ W GM TN + + ++ +L
Sbjct: 67 DGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIAKLNKLDKTLEN 126
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PDL+++ +T + + AI EA K
Sbjct: 127 EEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDT----NKEHIAINEAVK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ +P V +VD+N NP+ + YP+PGNDD+ +I+ YC +F A L+G
Sbjct: 183 LNVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQG 228
>gi|395791059|ref|ZP_10470517.1| 30S ribosomal protein S2 [Bartonella alsatica IBS 382]
gi|395408422|gb|EJF75032.1| 30S ribosomal protein S2 [Bartonella alsatica IBS 382]
Length = 257
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 105/229 (45%), Gaps = 46/229 (20%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+ +A VH GH+I + +M PYIYG R I DL Q+ LL AL V+ R G +L
Sbjct: 11 LLEAGVHFGHQIHRWNPKMTPYIYGQRNNIHIIDLAQTVPLLHQALKLVSDTVARGGRIL 70
Query: 132 FVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------------- 166
FVG Q S +I A ++ W GM TN
Sbjct: 71 FVGTKRQASDIIADAANRSAQYYVNARWLGGMLTNWKTISHSIHRLRKLDKILAAEAQGF 130
Query: 167 -----------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIPTVG 209
EKL RA+ + PDL+ + +T + N AI EA ++ IP +
Sbjct: 131 TKKERLNLERDREKLNRALGGIKDMGSVPDLIFVIDTN----KENIAIQEAKRLGIPVIA 186
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
I+D+NC+P+ +TYP+PGNDD AI YC +F A L G +Q + +
Sbjct: 187 IIDTNCDPDDVTYPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGV 235
>gi|452965787|gb|EME70805.1| 30S ribosomal protein S2 [Magnetospirillum sp. SO-1]
Length = 266
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 107/227 (47%), Gaps = 47/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + +M Y++G+R G I DL QS +L A+ V + G
Sbjct: 8 MRQLVEAGVHFGHNTRRWNPKMASYLFGIRNGIHIIDLQQSVPMLHRAMQAVRDVTAGGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S ++ ++A+ C ++ W GM TN
Sbjct: 68 RVLFVGTKHQASEIVAESAKRCGQYFVNHRWLGGMLTNWKTISNSIRRLRELDEQLASGA 127
Query: 167 ---------------SEKLFRAVTR------LPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
EKL RA+ LPD++ + +T L A+ EA K+ I
Sbjct: 128 LSALTKKEQLVLSREKEKLDRALGGIKDMGGLPDILFIIDTNKEAL----AVQEANKLGI 183
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
P V I+DSNC+P ITYP+PGNDD AIQ YC + A+L G +A+
Sbjct: 184 PVVAIIDSNCDPAGITYPIPGNDDAIRAIQTYCDLMSGAVLDGIQAE 230
>gi|350273137|ref|YP_004884450.1| 30S ribosomal protein S2 [Rickettsia japonica YH]
gi|348592350|dbj|BAK96311.1| 30S ribosomal protein S2 [Rickettsia japonica YH]
Length = 295
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K + DA VH GHK + +M YIYG R I DL QS L+ ALN + +
Sbjct: 7 VNIKALLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYETVKK 66
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
DG +LFV Q S +I + A+ C ++ W GM TN + + ++ +L
Sbjct: 67 DGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKTLEN 126
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PDL+++ +T + + AI EA K
Sbjct: 127 EEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDT----NKEHIAINEAVK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ +P V +VD+N NP+ + YP+PGNDD+ +I+ YC +F A L+G
Sbjct: 183 LNVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQG 228
>gi|238650547|ref|YP_002916399.1| 30S ribosomal protein S2 [Rickettsia peacockii str. Rustic]
gi|259495224|sp|C4K1A0.1|RS2_RICPU RecName: Full=30S ribosomal protein S2
gi|238624645|gb|ACR47351.1| 30S ribosomal protein S2 [Rickettsia peacockii str. Rustic]
Length = 295
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K + DA VH GHK + +M YIYG R I DL QS L+ ALN + +
Sbjct: 7 VNIKALLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYETVKK 66
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
DG +LFV Q S +I + A+ C ++ W GM TN + + ++ +L
Sbjct: 67 DGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKTLEN 126
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PDL+++ +T + + AI EA K
Sbjct: 127 EEALMGYTKKEILYMSRKKDKLLLSLAGIRNLNSKPDLLVVIDT----NKEHIAINEAVK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ +P V +VD+N NP+ + YP+PGNDD+ +I+ YC +F A L+G
Sbjct: 183 LNVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQG 228
>gi|427428411|ref|ZP_18918452.1| SSU ribosomal protein S2p (SAe) [Caenispirillum salinarum AK4]
gi|425882144|gb|EKV30826.1| SSU ribosomal protein S2p (SAe) [Caenispirillum salinarum AK4]
Length = 285
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 111/241 (46%), Gaps = 48/241 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ M ++ H GH + RM P++YGVR G I DL Q+ +L A+ V + G
Sbjct: 8 LRQMIESGCHFGHNTRRWNPRMAPFLYGVRDGVHIIDLQQTVPMLYRAMEAVRDVTANGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q + ++ ++A C ++ W GM TN
Sbjct: 68 RVLFVGTKRQAAEIVAESASRCGQYYVNHRWLGGMLTNWRTVSNSIKRLRELDEMFEVGV 127
Query: 167 ---------------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCI 205
EKL RA+ + PDL+ + +T+ L AI EA K+ I
Sbjct: 128 PSALTKRETLSLEREREKLTRALGGIKEMGGQPDLIFVIDTVKESL----AIAEANKLGI 183
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL-LSEKQE 264
P V ++DSN +PN I YP+PGNDD AI+ YC + A+L G A+ + + E++E
Sbjct: 184 PVVAVLDSNSDPNGIAYPIPGNDDAIRAIKMYCDLISGAVLDGISAEMAAAGVDIGEQEE 243
Query: 265 V 265
Sbjct: 244 A 244
>gi|379711855|ref|YP_005300194.1| 30S ribosomal protein S2 [Rickettsia philipii str. 364D]
gi|376328500|gb|AFB25737.1| 30S ribosomal protein S2 [Rickettsia philipii str. 364D]
Length = 295
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K + DA VH GHK + +M YIYG R I DL QS L+ ALN + +
Sbjct: 7 VNIKALLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMNVALNAIYETVKK 66
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
DG +LFV Q S +I + A+ C ++ W GM TN + + ++ +L
Sbjct: 67 DGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKTLEN 126
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PDL+++ +T + + AI EA K
Sbjct: 127 EEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDT----NKEHIAINEAVK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ +P V +VD+N NP+ + YP+PGNDD+ +I+ YC +F A L+G
Sbjct: 183 LNVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQG 228
>gi|157827988|ref|YP_001494230.1| 30S ribosomal protein S2 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165932681|ref|YP_001649470.1| 30S ribosomal protein S2 [Rickettsia rickettsii str. Iowa]
gi|378720787|ref|YP_005285674.1| 30S ribosomal protein S2 [Rickettsia rickettsii str. Colombia]
gi|378722140|ref|YP_005287026.1| 30S ribosomal protein S2 [Rickettsia rickettsii str. Arizona]
gi|378723499|ref|YP_005288383.1| 30S ribosomal protein S2 [Rickettsia rickettsii str. Hauke]
gi|379016950|ref|YP_005293185.1| 30S ribosomal protein S2 [Rickettsia rickettsii str. Brazil]
gi|379017287|ref|YP_005293521.1| 30S ribosomal protein S2 [Rickettsia rickettsii str. Hino]
gi|379018618|ref|YP_005294852.1| 30S ribosomal protein S2 [Rickettsia rickettsii str. Hlp#2]
gi|166226749|sp|A8GQP7.1|RS2_RICRS RecName: Full=30S ribosomal protein S2
gi|189045001|sp|B0BW38.1|RS2_RICRO RecName: Full=30S ribosomal protein S2
gi|157800469|gb|ABV75722.1| 30S ribosomal protein S2 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165907768|gb|ABY72064.1| SSU ribosomal protein S2P [Rickettsia rickettsii str. Iowa]
gi|376325474|gb|AFB22714.1| 30S ribosomal protein S2 [Rickettsia rickettsii str. Brazil]
gi|376325811|gb|AFB23050.1| 30S ribosomal protein S2 [Rickettsia rickettsii str. Colombia]
gi|376327164|gb|AFB24402.1| 30S ribosomal protein S2 [Rickettsia rickettsii str. Arizona]
gi|376329852|gb|AFB27088.1| 30S ribosomal protein S2 [Rickettsia rickettsii str. Hino]
gi|376331198|gb|AFB28432.1| 30S ribosomal protein S2 [Rickettsia rickettsii str. Hlp#2]
gi|376332514|gb|AFB29747.1| 30S ribosomal protein S2 [Rickettsia rickettsii str. Hauke]
Length = 295
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K + DA VH GHK + +M YIYG R I DL QS L+ ALN + +
Sbjct: 7 VNIKALLDAGVHFGHKTSRWNPKMASYIYGKRDDVHIIDLRQSVALMNVALNAIYETVKK 66
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
DG +LFV Q S +I + A+ C ++ W GM TN + + ++ +L
Sbjct: 67 DGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKTLEN 126
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PDL+++ +T + + AI EA K
Sbjct: 127 EEALMGYTKKEILDMSRKKDKLLLSLAGIRNLNSKPDLLVVIDT----NKEHIAINEAVK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ +P V +VD+N NP+ + YP+PGNDD+ +I+ YC +F A L+G
Sbjct: 183 LNVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQG 228
>gi|374318862|ref|YP_005065360.1| 30S ribosomal protein S2 [Rickettsia slovaca 13-B]
gi|383750756|ref|YP_005425857.1| 30S ribosomal protein S2 [Rickettsia slovaca str. D-CWPP]
gi|360041410|gb|AEV91792.1| 30S ribosomal protein S2 [Rickettsia slovaca 13-B]
gi|379773770|gb|AFD19126.1| 30S ribosomal protein S2 [Rickettsia slovaca str. D-CWPP]
Length = 295
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K + DA VH GHK + +M YIYG R I DL QS L+ ALN + +
Sbjct: 7 VNIKALLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYETVKK 66
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
DG +LFV Q S +I + A+ C ++ W GM TN + + ++ +L
Sbjct: 67 DGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKTLEN 126
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PDL+++ +T + + AI EA K
Sbjct: 127 EEALMGYTKKEILNMSRKKDKLLLSLAGIRNLNSKPDLLVVIDT----NKEHIAINEAVK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ +P V +VD+N NP+ + YP+PGNDD+ +I+ YC +F A L+G
Sbjct: 183 LNVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQG 228
>gi|34580930|ref|ZP_00142410.1| 30S ribosomal protein S2 [Rickettsia sibirica 246]
gi|229586324|ref|YP_002844825.1| 30S ribosomal protein S2 [Rickettsia africae ESF-5]
gi|383483462|ref|YP_005392375.1| 30S ribosomal protein S2 [Rickettsia parkeri str. Portsmouth]
gi|259495223|sp|C3PMC2.1|RS2_RICAE RecName: Full=30S ribosomal protein S2
gi|28262315|gb|EAA25819.1| 30S ribosomal protein S2 [Rickettsia sibirica 246]
gi|228021374|gb|ACP53082.1| 30S ribosomal protein S2 [Rickettsia africae ESF-5]
gi|378935816|gb|AFC74316.1| 30S ribosomal protein S2 [Rickettsia parkeri str. Portsmouth]
Length = 295
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K + DA VH GHK + +M YIYG R I DL QS L+ ALN + +
Sbjct: 7 VNIKALLDAGVHFGHKTSRWNPKMASYIYGERDDVHIIDLRQSVALMSVALNAIYETVKK 66
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
DG +LFV Q S +I + A+ C ++ W GM TN + + ++ +L
Sbjct: 67 DGKILFVSTKIQASDIIAEYAEKCGQYYVNHRWLGGMLTNWKTIAGSIEKLNKLDKTLEN 126
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PDL+++ +T + + AI EA K
Sbjct: 127 EEALMGYTKKEILNMSRKKDKLLLSLAGIRNLNSKPDLLVVIDT----NKEHIAINEAVK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ +P V +VD+N NP+ + YP+PGNDD+ +I+ YC +F A L+G
Sbjct: 183 LNVPIVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSLFADAALQG 228
>gi|256823127|ref|YP_003147090.1| 30S ribosomal protein S2 [Kangiella koreensis DSM 16069]
gi|256796666|gb|ACV27322.1| ribosomal protein S2 [Kangiella koreensis DSM 16069]
Length = 244
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 106/228 (46%), Gaps = 39/228 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GHK + +M+PYI+G R I +L+++ + DALN++ +A
Sbjct: 4 VSMRDMLQAGVHFGHKTRFWNPQMRPYIFGARNKIHIINLEETVPMFNDALNYLGKVASN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G +LFVG S ++++ A +F + W GM TN + + ++ RL DL
Sbjct: 64 KGKILFVGTKRAASEIVKEEATRSGQFFVDKRWLGGMLTNYKTIRGSINRLKDLEKQSED 123
Query: 181 ----------VILTNTLTTVLEP-----------------------NPAIGEAAKMCIPT 207
++ LE N AI EA KM IP
Sbjct: 124 GTFERLTKKEALMRRREMEKLEASIGGIKNMGGLPDVLFVIDADHENIAIAEANKMGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V +VD+N NP + Y +PGNDD AI+ YC A+L GK++ T
Sbjct: 184 VAVVDTNSNPKGVDYIIPGNDDAIRAIRLYCAAVADAVLDGKQSSATT 231
>gi|46202352|ref|ZP_00053343.2| COG0052: Ribosomal protein S2 [Magnetospirillum magnetotacticum
MS-1]
Length = 266
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 107/227 (47%), Gaps = 47/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + +M Y++G+R G I DL QS +L A+ V + G
Sbjct: 8 MRQLVEAGVHFGHNTRRWNPKMASYLFGIRNGIHIIDLQQSVPMLHRAMQAVRDVTAGGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S ++ ++A+ C ++ W GM TN
Sbjct: 68 RVLFVGTKHQASEVVAESAKRCGQYFVNHRWLGGMLTNWKTISNSIRRLRELDEQLASGA 127
Query: 167 ---------------SEKLFRAVTR------LPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
EKL RA+ LPD++ + +T L A+ EA K+ I
Sbjct: 128 LAGLTKKEQLVLSREKEKLDRALGGIKDMGGLPDILFIIDTNKEAL----AVQEANKLGI 183
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
P V I+DSNC+P ITYP+PGNDD AIQ YC + A+L G +A+
Sbjct: 184 PVVAIIDSNCDPAGITYPIPGNDDAIRAIQTYCDLMSGAVLDGIQAE 230
>gi|83311597|ref|YP_421861.1| 30S ribosomal protein S2 [Magnetospirillum magneticum AMB-1]
gi|123767989|sp|Q2W4C3.1|RS2_MAGMM RecName: Full=30S ribosomal protein S2
gi|82946438|dbj|BAE51302.1| Ribosomal protein S2 [Magnetospirillum magneticum AMB-1]
Length = 266
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 107/227 (47%), Gaps = 47/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + +M Y++G+R G I DL QS +L A+ V + G
Sbjct: 8 MRQLVEAGVHFGHNTRRWNPKMASYLFGIRNGIHIIDLQQSVPMLHRAMQAVRDVTAGGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S ++ ++A+ C ++ W GM TN
Sbjct: 68 RVLFVGTKHQASDVVAESAKRCGQYFVNHRWLGGMLTNWKTISNSIRRLRELDEQLASGA 127
Query: 167 ---------------SEKLFRAVTR------LPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
EKL RA+ LPD++ + +T L A+ EA K+ I
Sbjct: 128 LAGLTKKEQLVLSREKEKLDRALGGIKDMGGLPDILFIIDTNKEAL----AVQEANKLGI 183
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
P V I+DSNC+P ITYP+PGNDD AIQ YC + A+L G +A+
Sbjct: 184 PVVAIIDSNCDPAGITYPIPGNDDAIRAIQTYCDLMSGAVLDGIQAE 230
>gi|88606909|ref|YP_505002.1| 30S ribosomal protein S2 [Anaplasma phagocytophilum HZ]
gi|123750113|sp|Q2GKU9.1|RS2_ANAPZ RecName: Full=30S ribosomal protein S2
gi|88597972|gb|ABD43442.1| ribosomal protein S2 [Anaplasma phagocytophilum HZ]
Length = 296
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 40/219 (18%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGV-RQGQI-IFDLDQSAELLRDALNFVAHIAYR 126
++D+ +A VHLGHK G + M PYIYGV R I I DL ++A LLR+AL+ + + +R
Sbjct: 9 IRDLMEAGVHLGHKAGRWNPAMAPYIYGVHRYKDIHIIDLRKTAVLLRNALSVLYDVVHR 68
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
G VLFVG Q S +I + A C ++ W GM TN E + ++ RL D L N
Sbjct: 69 RGRVLFVGTKVQASNVIAEEAARCGQYYVNHRWLGGMLTNWETVSSSIRRLLDFEKLLND 128
Query: 187 -----------------------------------LTTVLEPNP---AIGEAAKMCIPTV 208
+ V++ N AI EA K+ IP V
Sbjct: 129 TDAKFTKKELLMFDKKREKLERSLGGIREMGGLPHILFVIDTNKEHIAIQEANKLKIPVV 188
Query: 209 GIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILK 247
++D+N +P + YP+PGNDD+ +I ++C+ IL+
Sbjct: 189 AVLDTNSDPRGVDYPIPGNDDSIRSIDFFCRAVSNTILE 227
>gi|409437277|ref|ZP_11264396.1| 30S ribosomal subunit protein S2 [Rhizobium mesoamericanum STM3625]
gi|408751001|emb|CCM75552.1| 30S ribosomal subunit protein S2 [Rhizobium mesoamericanum STM3625]
Length = 255
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 105/229 (45%), Gaps = 46/229 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ +L AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S LI +A+ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASELIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLDEILASEQ 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 SGYSKKERLNLEREREKLDKALGGIKDMGGTPDLMFIVDTNKEKI----AIDEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V I+DSNC+P+LI YP+PGNDD AI YC + A + G +Q +
Sbjct: 184 VVAIIDSNCDPDLIDYPIPGNDDASRAIALYCDLIARAAIDGIARQQSS 232
>gi|222148862|ref|YP_002549819.1| 30S ribosomal protein S2 [Agrobacterium vitis S4]
gi|221735848|gb|ACM36811.1| 30S ribosomal protein S2 [Agrobacterium vitis S4]
Length = 248
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 105/229 (45%), Gaps = 46/229 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ +L AL V+ R G
Sbjct: 1 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S LI A+ ++ W GM TN + + ++ RL
Sbjct: 61 RVLFVGTKRQASDLIADAAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLDEILNSEA 120
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+++ +T + AI EA ++ IP
Sbjct: 121 QGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMVIVDTNKEKI----AIDEAKRLGIP 176
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V I+DSNC+P+LI YP+PGNDD AI YC + A + G +Q +
Sbjct: 177 VVAIIDSNCDPDLIDYPIPGNDDASRAIALYCDLISRAAIDGIARQQGS 225
>gi|395787525|ref|ZP_10467124.1| 30S ribosomal protein S2 [Bartonella birtlesii LL-WM9]
gi|395411040|gb|EJF77575.1| 30S ribosomal protein S2 [Bartonella birtlesii LL-WM9]
Length = 262
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 105/229 (45%), Gaps = 46/229 (20%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+ +A VH GH+ + +M PYIYG R I DL Q+ LL AL V+ I R G +L
Sbjct: 11 LLEAGVHFGHQTHRWNPKMTPYIYGERNNIHIIDLAQTVPLLHQALKLVSDIVARGGRIL 70
Query: 132 FVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------------- 166
FVG Q S +I A ++ W GM TN
Sbjct: 71 FVGTKRQASDIIADAANRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLDKILASEAQGF 130
Query: 167 -----------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIPTVG 209
EKL RA+ + PDL+ + +T + N AI EA ++ IP +
Sbjct: 131 TKKERLNLERDREKLNRALGGIKDMGSVPDLIFVIDTN----KENIAIQEAKRLGIPVIA 186
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
I+D+NC+P+ +T+P+PGNDD AI YC +F A L G +Q + +
Sbjct: 187 IIDTNCDPDNVTHPIPGNDDASRAIALYCDLFARAALDGIARQQGAMGV 235
>gi|399037078|ref|ZP_10733988.1| ribosomal protein S2 [Rhizobium sp. CF122]
gi|398065365|gb|EJL57003.1| ribosomal protein S2 [Rhizobium sp. CF122]
Length = 255
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 105/229 (45%), Gaps = 46/229 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ +L AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S LI +A+ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASELIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLDEILSSEQ 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 SGYSKKERLTLEREREKLDKALGGIKDMGGTPDLMFIIDTNKEKI----AIDEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V I+DSNC+P+LI YP+PGNDD AI YC + A + G +Q +
Sbjct: 184 VVAIIDSNCDPDLIDYPIPGNDDASRAIALYCDLIARAAIDGIARQQSS 232
>gi|319404371|emb|CBI77974.1| 30S ribosomal protein S2 [Bartonella rochalimae ATCC BAA-1498]
gi|319407374|emb|CBI81025.1| 30S ribosomal protein S2 [Bartonella sp. 1-1C]
Length = 266
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 106/232 (45%), Gaps = 46/232 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M PYIYG R I DL Q+ LL AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMAPYIYGQRNNIHIIDLSQTVPLLHQALKVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S +I A ++ W GM TN
Sbjct: 68 RVLFVGTKRQASDIISDAANRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLDKTLSSGV 127
Query: 167 --------------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL RA+ + PDL+ + +T + N AI EA ++ IP
Sbjct: 128 QGFTKKERLNLERDREKLNRALGGIKDMGSVPDLMFIIDTN----KENIAIQEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
V ++D+NC+P+ I YP+PGNDD A+ +YC + A L G +Q T+ +
Sbjct: 184 VVAVIDTNCDPDNIDYPIPGNDDASRAVTFYCDLIARAALDGIARQQSTMGV 235
>gi|88608048|ref|YP_506812.1| 30S ribosomal protein S2 [Neorickettsia sennetsu str. Miyayama]
gi|123722735|sp|Q2GCI4.1|RS2_NEOSM RecName: Full=30S ribosomal protein S2
gi|88600217|gb|ABD45685.1| ribosomal protein S2 [Neorickettsia sennetsu str. Miyayama]
Length = 298
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 109/221 (49%), Gaps = 39/221 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQI-IFDLDQSAELLRDALNFVAHIAY 125
V VK++F+ HLGHK + +M YIYG + I DL ++ +LR ALN ++ +A
Sbjct: 8 VTVKNLFEVGAHLGHKTRFWNPKMVSYIYGTSNAKTHIVDLQKTVPMLRTALNAISDVAA 67
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL-------- 177
G VLFVG Q +I++ A C ++ W GMFTN + ++V +L
Sbjct: 68 NSGRVLFVGTKMQACDIIKEEATRCGQYYVNLRWPSGMFTNWNTVSKSVKKLVHYEKLLE 127
Query: 178 --PDLVILTNTLTT-------------------------VLEPNP---AIGEAAKMCIPT 207
D++ L+ V++P A+ EA K+ IP
Sbjct: 128 QEGDVLSKKERLSINRKRERIEKYLGGVRKMGGLPNIIFVIDPKKEHIAVEEAWKLGIPV 187
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
V +VD+NC+P+ ITY +PGNDD+ I+YYC + A+L G
Sbjct: 188 VAVVDTNCDPSKITYAIPGNDDSLRCIEYYCSLVADAVLVG 228
>gi|417108868|ref|ZP_11962971.1| 30S ribosomal protein S2 [Rhizobium etli CNPAF512]
gi|327189222|gb|EGE56401.1| 30S ribosomal protein S2 [Rhizobium etli CNPAF512]
Length = 255
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 106/229 (46%), Gaps = 46/229 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ +L AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQIVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S +I +A+ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLDEILGGEA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 QGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKI----AIDEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V I+DSNC+P+LI YP+PGNDD AI YC++ A + G +Q +
Sbjct: 184 VVAIIDSNCDPDLIDYPIPGNDDASRAIALYCELISRAAIDGIARQQSS 232
>gi|86357534|ref|YP_469426.1| 30S ribosomal protein S2 [Rhizobium etli CFN 42]
gi|209549182|ref|YP_002281099.1| 30S ribosomal protein S2 [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|424890531|ref|ZP_18314130.1| ribosomal protein S2 [Rhizobium leguminosarum bv. trifolii WSM2012]
gi|424894887|ref|ZP_18318461.1| ribosomal protein S2 [Rhizobium leguminosarum bv. trifolii WSM2297]
gi|424914132|ref|ZP_18337496.1| ribosomal protein S2 [Rhizobium leguminosarum bv. trifolii WSM597]
gi|123738344|sp|Q2K8Y7.1|RS2_RHIEC RecName: Full=30S ribosomal protein S2
gi|238058199|sp|B5ZN83.1|RS2_RHILW RecName: Full=30S ribosomal protein S2
gi|86281636|gb|ABC90699.1| 30S ribosomal protein S2 [Rhizobium etli CFN 42]
gi|209534938|gb|ACI54873.1| ribosomal protein S2 [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|392850308|gb|EJB02829.1| ribosomal protein S2 [Rhizobium leguminosarum bv. trifolii WSM597]
gi|393172749|gb|EJC72794.1| ribosomal protein S2 [Rhizobium leguminosarum bv. trifolii WSM2012]
gi|393179114|gb|EJC79153.1| ribosomal protein S2 [Rhizobium leguminosarum bv. trifolii WSM2297]
Length = 255
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 106/229 (46%), Gaps = 46/229 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ +L AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S +I +A+ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLDEILNGEA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 QGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKI----AIDEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V I+DSNC+P+LI YP+PGNDD AI YC++ A + G +Q +
Sbjct: 184 VVAIIDSNCDPDLIDYPIPGNDDASRAIALYCELISRAAIDGIARQQSS 232
>gi|440226541|ref|YP_007333632.1| 30S ribosomal protein S2 [Rhizobium tropici CIAT 899]
gi|440038052|gb|AGB71086.1| 30S ribosomal protein S2 [Rhizobium tropici CIAT 899]
Length = 255
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 104/227 (45%), Gaps = 46/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ LL AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPLLSRALQVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S LI +A+ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASELIADSAKRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLDEILSGEA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 QGFTKKERLNLEREREKLDKALGGIKDMGGTPDLMFIIDTNKEKI----AIDEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V I+DSNC+P+LI YP+PGNDD AI YC + A + G +Q
Sbjct: 184 VVAIIDSNCDPDLIDYPIPGNDDASRAIALYCDLISRAAIDGIARQQ 230
>gi|313231056|emb|CBY19054.1| unnamed protein product [Oikopleura dioica]
Length = 261
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 116/207 (56%), Gaps = 21/207 (10%)
Query: 55 LRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLR 114
L D F ++N +K +DM+ A++HLGH + + M+PYI G R G I DLDQS L
Sbjct: 36 LEQKDCFDLKNKIKWQDMYKARMHLGHSVIMRNPFMEPYILGCRNGTDIIDLDQSRAQLL 95
Query: 115 DALNFVAHIAYRDGIVLFV----GQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKL 170
ALNF+ H+A R G +LF+ G S++ +L K A++ E+ T +E +
Sbjct: 96 IALNFIGHVALRGGTILFMPNSEGSSSRAAL---KAAKEAGEYCDTSV--------NEPV 144
Query: 171 FRA--VTRL-PDLVILTNTL--TTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVP 225
F + TR+ PD+VIL N L T + P G + IP +GIVD++ NP++I+YP+P
Sbjct: 145 FVSDNATRVEPDIVILLNCLGKTPGVLPRHITG-CCERNIPIIGIVDTDINPSMISYPIP 203
Query: 226 GNDDTPSAIQYYCQVFKTAILKGKKAK 252
ND++ ++ Y + IL K+ +
Sbjct: 204 CNDESTLSVNYVLKQMVDVILNAKELR 230
>gi|116251977|ref|YP_767815.1| 30S ribosomal protein S2 [Rhizobium leguminosarum bv. viciae 3841]
gi|241204504|ref|YP_002975600.1| 30S ribosomal protein S2 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|402487551|ref|ZP_10834369.1| 30S ribosomal protein S2 [Rhizobium sp. CCGE 510]
gi|424870451|ref|ZP_18294113.1| ribosomal protein S2 [Rhizobium leguminosarum bv. viciae WSM1455]
gi|123081925|sp|Q1MH54.1|RS2_RHIL3 RecName: Full=30S ribosomal protein S2
gi|115256625|emb|CAK07713.1| putative 30S ribosomal protein S2 [Rhizobium leguminosarum bv.
viciae 3841]
gi|240858394|gb|ACS56061.1| ribosomal protein S2 [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|393166152|gb|EJC66199.1| ribosomal protein S2 [Rhizobium leguminosarum bv. viciae WSM1455]
gi|401813420|gb|EJT05764.1| 30S ribosomal protein S2 [Rhizobium sp. CCGE 510]
Length = 255
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 106/229 (46%), Gaps = 46/229 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ +L AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S +I +A+ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLDEILNGEA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 QGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKI----AIDEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V I+DSNC+P+LI YP+PGNDD AI YC++ A + G +Q +
Sbjct: 184 VVAIIDSNCDPDLIDYPIPGNDDASRAIALYCELISRAAIDGIARQQGS 232
>gi|284107230|ref|ZP_06386371.1| Ribosomal protein S2 [Candidatus Poribacteria sp. WGA-A3]
gi|283829977|gb|EFC34256.1| Ribosomal protein S2 [Candidatus Poribacteria sp. WGA-A3]
Length = 269
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 105/223 (47%), Gaps = 39/223 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
N+V +KDM +A VH GH+ + +MKPY++G R G + DL Q+A+ DA NFV
Sbjct: 7 NMVSIKDMLEAGVHFGHQTNRWNPKMKPYLFGERNGIYLIDLQQTAKFFFDAYNFVRDTV 66
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
VLFVG Q ++E+ AQ C + T+ W GM TN E + +++ +L L
Sbjct: 67 AAGESVLFVGTKRQAVDIVEQEAQRCGMYYVTQRWLGGMLTNFETIKKSINQLKKLEAAQ 126
Query: 181 ------------VILTNTLTTVLEP-----------------------NPAIGEAAKMCI 205
V+L LE + + EA ++ I
Sbjct: 127 TDGTHERLKKKEVLLMEKERGKLEKYLSGIKTMEGLPGCIYVLDTRIQHITVKEANRLGI 186
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
P V IVD+NC+P I +P+PGNDD +++ + A L+G
Sbjct: 187 PVVAIVDTNCDPTRIDFPIPGNDDAIRSLKLFTARIADACLEG 229
>gi|190891607|ref|YP_001978149.1| 30S ribosomal protein S2 [Rhizobium etli CIAT 652]
gi|421589141|ref|ZP_16034329.1| 30S ribosomal protein S2 [Rhizobium sp. Pop5]
gi|238692537|sp|B3PYP2.1|RS2_RHIE6 RecName: Full=30S ribosomal protein S2
gi|190696886|gb|ACE90971.1| 30S ribosomal protein S2 [Rhizobium etli CIAT 652]
gi|403705986|gb|EJZ21396.1| 30S ribosomal protein S2 [Rhizobium sp. Pop5]
Length = 255
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 106/229 (46%), Gaps = 46/229 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ +L AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S +I +A+ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLDEILGGEA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 QGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKI----AIDEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V I+DSNC+P+LI YP+PGNDD AI YC++ A + G +Q +
Sbjct: 184 VVAIIDSNCDPDLIDYPIPGNDDASRAIALYCELISRAAIDGIARQQSS 232
>gi|424881415|ref|ZP_18305047.1| ribosomal protein S2 [Rhizobium leguminosarum bv. trifolii WU95]
gi|392517778|gb|EIW42510.1| ribosomal protein S2 [Rhizobium leguminosarum bv. trifolii WU95]
Length = 255
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 106/229 (46%), Gaps = 46/229 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ +L AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S +I +A+ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLDEILNGEA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 QGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKI----AIDEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V I+DSNC+P+LI YP+PGNDD AI YC++ A + G +Q +
Sbjct: 184 VVAIIDSNCDPDLIDYPIPGNDDASRAIALYCELISRAAIDGIARQQGS 232
>gi|222085857|ref|YP_002544388.1| 30S ribosomal protein S2 [Agrobacterium radiobacter K84]
gi|398378662|ref|ZP_10536818.1| ribosomal protein S2 [Rhizobium sp. AP16]
gi|254764450|sp|B9JEX0.1|RS2_AGRRK RecName: Full=30S ribosomal protein S2
gi|221723305|gb|ACM26461.1| ribosomal protein S2 [Agrobacterium radiobacter K84]
gi|397724314|gb|EJK84785.1| ribosomal protein S2 [Rhizobium sp. AP16]
Length = 256
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 104/227 (45%), Gaps = 46/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ LL AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPLLSRALQVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S LI +A+ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASELIADSAKRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLDEILNGDA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 QGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKI----AIDEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V I+DSNC+P+LI YP+PGNDD AI YC + A + G +Q
Sbjct: 184 VVAIIDSNCDPDLIDYPIPGNDDASRAIALYCDLIARAAIDGIARQQ 230
>gi|255020967|ref|ZP_05293022.1| SSU ribosomal protein S2p (SAe) [Acidithiobacillus caldus ATCC
51756]
gi|340781583|ref|YP_004748190.1| 30S ribosomal protein S2p (SAe) [Acidithiobacillus caldus SM-1]
gi|254969572|gb|EET27079.1| SSU ribosomal protein S2p (SAe) [Acidithiobacillus caldus ATCC
51756]
gi|340555736|gb|AEK57490.1| SSU ribosomal protein S2p (SAe) [Acidithiobacillus caldus SM-1]
Length = 251
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 107/229 (46%), Gaps = 39/229 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ + +A H GH+ +M PYI+G R I +L+ + +LR AL F+ ++ +
Sbjct: 6 VSMRALLEAGAHFGHQSRYWHPKMAPYIFGERNRIHIINLEHTLPMLRTALAFLEQVSRK 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
G VLFVG Q IE+ A+ C F + W G TN
Sbjct: 66 HGRVLFVGTKRQAREAIEEEARRCGAFYVNQRWLGGTLTNFKTIRQSLRRFEELEQMSVD 125
Query: 167 -----------------SEKLFRAVTRLPDLVILTNTL--TTVLEPNPAIGEAAKMCIPT 207
EKL R++ + D+ + + L V N A+ EA K+ IP
Sbjct: 126 GTLEKLTKKEVLTLTREREKLERSLGGIKDMTGVPDALFVIDVGHENIAVAEAKKLGIPV 185
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTL 256
VG+VDSNC+P+ I YP+PGNDD AI+ Y + AIL G++ + L
Sbjct: 186 VGVVDSNCDPSPIDYPIPGNDDATRAIRLYASLAADAILAGRQGSEADL 234
>gi|294084088|ref|YP_003550846.1| 30S ribosomal protein S2 [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663661|gb|ADE38762.1| Ribosomal protein S2 [Candidatus Puniceispirillum marinum IMCC1322]
Length = 287
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 103/219 (47%), Gaps = 39/219 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ M +A VH GH D RM+P+I+G R I DL Q+ +L AL ++ +A + G
Sbjct: 8 MRQMLEAGVHFGHSTRRWDPRMEPFIFGERNKTHILDLQQTVPMLHHALKAISDVAAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI------ 182
VLFVG S I +TA+DC ++ W GM TN + +++ RL DL
Sbjct: 68 RVLFVGTKRAASEKIAETARDCGQYYVNHRWLGGMLTNWATVSQSIRRLRDLEARMESGE 127
Query: 183 ------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPTVG 209
L TL + E A+ EA ++ IP V
Sbjct: 128 INQLTKKEILQLTREQEKLERTLGGIKEMGGLPDILFILDTNKEAIAVQEANRLNIPVVA 187
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+VDSN +P + Y +PGNDD AI +YC++ + A+L G
Sbjct: 188 VVDSNASPEGVDYLIPGNDDAMRAITFYCELVQGAVLDG 226
>gi|430003534|emb|CCF19323.1| 30S ribosomal protein S2 [Rhizobium sp.]
Length = 259
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 104/227 (45%), Gaps = 46/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ +L AL ++ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRSNIHIIDLAQTVPMLSRALQVISDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S LI +A+ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASELIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIARLRKLDEILASEA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 SGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKI----AIDEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V I+DSNC+P+LI YP+PGNDD AI YC + A + G +Q
Sbjct: 184 VVAIIDSNCDPDLIDYPIPGNDDASRAIALYCDLIARAAIDGIARQQ 230
>gi|395792167|ref|ZP_10471605.1| 30S ribosomal protein S2 [Bartonella vinsonii subsp. arupensis
Pm136co]
gi|423714172|ref|ZP_17688431.1| 30S ribosomal protein S2 [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395421319|gb|EJF87575.1| 30S ribosomal protein S2 [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395432681|gb|EJF98656.1| 30S ribosomal protein S2 [Bartonella vinsonii subsp. arupensis
Pm136co]
Length = 257
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 104/229 (45%), Gaps = 46/229 (20%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+ +A VH GH+ + +M PYIYG R I DL Q+ LL AL V+ R G +L
Sbjct: 11 LLEAGVHFGHQTHRWNPKMTPYIYGQRNNIHIIDLAQTVPLLHQALKLVSDTVARGGRIL 70
Query: 132 FVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------------- 166
FVG Q S +I A ++ W GM TN
Sbjct: 71 FVGTKRQASDIIADAANRSAQYYVNARWLGGMLTNWKTISHSIHRLRKLDKILAAEAQGF 130
Query: 167 -----------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIPTVG 209
EKL RA+ + PDL+ + +T + N AI EA ++ IP +
Sbjct: 131 TKKERLNLERDREKLNRALGGIKDMGSVPDLIFVIDTN----KENIAIQEAKRLGIPVIA 186
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
I+D+NC+P+ IT+P+PGNDD AI YC +F A L G +Q + +
Sbjct: 187 IIDTNCDPDNITHPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGV 235
>gi|158520491|ref|YP_001528361.1| 30S ribosomal protein S2 [Desulfococcus oleovorans Hxd3]
gi|158509317|gb|ABW66284.1| ribosomal protein S2 [Desulfococcus oleovorans Hxd3]
Length = 304
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 49/244 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K++ ++ VH GH+ + +MKPYI+G R G I DL ++ + +DA +F+ H+A +
Sbjct: 4 ITMKELLESGVHFGHQTRRWNPKMKPYIFGARNGIYIIDLQKTVRMFKDAYDFIGHVAEK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEF-AHTRFWRQGMFTN------------------- 166
G VLFVG Q I + A + F H R W GM TN
Sbjct: 64 GGSVLFVGTKKQARESIYEEANRAEMFYVHNR-WLGGMLTNFQTIKKSIDQLHYLNELVN 122
Query: 167 ------------------SEKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL +++TRLP + + + + A+GEA +
Sbjct: 123 DGSIERYPKKEQAGLMRQREKLDSVLGGIQSMTRLPAALFVIDVRKEAI----AVGEARR 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+ IP V +VD+NC+P+ I Y +PGNDD AI+ A + G+K ++ + +K
Sbjct: 179 LGIPVVAVVDTNCDPDNIDYVIPGNDDAIRAIRLMSSRVADACIDGRKRFEEKKQAFEDK 238
Query: 263 QEVQ 266
E +
Sbjct: 239 AEAE 242
>gi|384084925|ref|ZP_09996100.1| 30S ribosomal protein S2 [Acidithiobacillus thiooxidans ATCC 19377]
Length = 250
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 111/238 (46%), Gaps = 41/238 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ + +A VH GH+ +M PY++G R I +L+ + +LR AL F+ ++ +
Sbjct: 5 VSMRALLEAGVHFGHQARYWHPKMAPYLFGERNRIHIINLEHTLPMLRSALAFIEQVSRK 64
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
G VLFVG Q +E+ A+ C F + W G TN + + +++ RL +L +T
Sbjct: 65 HGRVLFVGTKRQAREAVEQEARRCGAFFVNQRWLGGTLTNFKTIRQSIRRLDELDQMTAD 124
Query: 187 LT---------------------------------------TVLEPNPAIGEAAKMCIPT 207
T V N A+ EA K+ IP
Sbjct: 125 GTLEKLTKKEGLTLSRERDKLERSLGGIKEMNGLPDAIFVIDVGHENIAVLEARKLGIPV 184
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEV 265
+G+VDSNC+P LI YP+PGNDD AI+ Y + AIL G++ LL E EV
Sbjct: 185 IGVVDSNCDPLLIDYPIPGNDDATRAIRLYASLVADAILAGRQGG--AADLLDEFVEV 240
>gi|347735263|ref|ZP_08868172.1| 30S ribosomal protein S2 [Azospirillum amazonense Y2]
gi|346921563|gb|EGY02237.1| 30S ribosomal protein S2 [Azospirillum amazonense Y2]
Length = 252
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + +M PYI+GVR G I DL+QS +L A+ V + G
Sbjct: 1 MRQLLEAGVHFGHHTRRWNPKMAPYIFGVRNGVHIIDLEQSVPMLHRAMQAVRDVVAGGG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR------------ 176
VLFVG Q + + A C ++ W GM TN + + +++ R
Sbjct: 61 RVLFVGTKRQAQEKVAEAAGRCGQYYVNHRWLGGMLTNWKTISQSIKRLREMDELLGGQI 120
Query: 177 ------------------------------LPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
LPD++++ +T L A+ EA K+ IP
Sbjct: 121 AGLTKKELLNRTRDRDKLERALGGIKEMGGLPDILVIIDTNKESL----AVQEANKLGIP 176
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V ++DSN NP+ +T+P+PGNDD AI+ YC++ A+L G A+
Sbjct: 177 VVAVLDSNSNPDGVTFPIPGNDDALRAIELYCELISGAVLDGLHAE 222
>gi|262277279|ref|ZP_06055072.1| ribosomal protein S2 [alpha proteobacterium HIMB114]
gi|262224382|gb|EEY74841.1| ribosomal protein S2 [alpha proteobacterium HIMB114]
Length = 281
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 116/244 (47%), Gaps = 50/244 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V VKD+ +A VHLGHK + +MKPYI+G + I DL ++ ELL+ AL +
Sbjct: 25 VTVKDLLEAGVHLGHKTFRWNPKMKPYIFGEKNSIHIIDLSKTLELLKTALLELHKSVSS 84
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
G VLFV Q S LI + A++ + W GM TN
Sbjct: 85 GGKVLFVSTKKQASELIAEVAKETDNYYVNFRWLGGMLTNWNTITNSIKRLKELKKNLLK 144
Query: 167 ----------------SEKLFRAV------TRLPDLVILTNTLTTVLEPNPAIGEAAKMC 204
EKL R++ ++PD++ + +T L A+ EA K+
Sbjct: 145 EDSGFTKKELIKMNLEKEKLERSLGGISEMKKIPDIIFVIDTNIESL----AVLEAKKLN 200
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQE 264
IP +G++DSN +P+ I +P+PGNDD +I YC + K IL KK +K+ +K++
Sbjct: 201 IPIIGVLDSNSDPDNIDFPIPGNDDARRSINLYCDLIKKTILDAKK----NIKVSEKKEK 256
Query: 265 VQHN 268
+ N
Sbjct: 257 INDN 260
>gi|408380392|ref|ZP_11177976.1| 30S ribosomal protein S2 [Agrobacterium albertimagni AOL15]
gi|407745605|gb|EKF57137.1| 30S ribosomal protein S2 [Agrobacterium albertimagni AOL15]
Length = 255
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 104/227 (45%), Gaps = 46/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ +L AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRSNIHIIDLAQTVPMLSRALQVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S +I +A+ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIARLRKLDEILASEA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 SGYSKKERLNLEREREKLEKALGGIRDMGGTPDLMFIIDTNKEKI----AIDEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V ++DSNC+P+LI YP+PGNDD AI YC + A + G +Q
Sbjct: 184 VVAVIDSNCDPDLIDYPIPGNDDASRAIALYCDLISRAAIDGIARQQ 230
>gi|222109130|ref|YP_002551395.1| 30S ribosomal protein S2 [Agrobacterium vitis S4]
gi|221738404|gb|ACM39269.1| 30S ribosomal protein S2 [Agrobacterium vitis S4]
Length = 307
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 104/227 (45%), Gaps = 46/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ G + +MKPYI+G R I DL Q+ LL AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTGRWNPKMKPYIFGDRSNIHIIDLGQTVPLLSRALQVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S +I +A+ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLDEILNSEG 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 SGYSKKERLTLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKI----AIEEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V I+D+NC+P+ I +P+PGNDD AI YC + A + G +Q
Sbjct: 184 VVAIIDTNCDPDSIDFPIPGNDDASRAISLYCDLIARAAIDGIGRQQ 230
>gi|153009359|ref|YP_001370574.1| 30S ribosomal protein S2 [Ochrobactrum anthropi ATCC 49188]
gi|404319062|ref|ZP_10966995.1| 30S ribosomal protein S2 [Ochrobactrum anthropi CTS-325]
gi|166225290|sp|A6X0J1.1|RS2_OCHA4 RecName: Full=30S ribosomal protein S2
gi|151561247|gb|ABS14745.1| ribosomal protein S2 [Ochrobactrum anthropi ATCC 49188]
Length = 256
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 104/232 (44%), Gaps = 46/232 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M PYIYG R I DL Q+ LL +AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMAPYIYGDRNNIHILDLSQTVPLLHNALKIVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S +I A ++ W GM TN
Sbjct: 68 RVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLDELLAGEA 127
Query: 167 --------------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL RA+ + PDL+ + +T + AI EA ++ IP
Sbjct: 128 QGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAI----AIQEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
V ++DSNC+P+ I YP+PGNDD AI YC + A L G +Q + +
Sbjct: 184 VVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGI 235
>gi|239832049|ref|ZP_04680378.1| ribosomal protein S2 [Ochrobactrum intermedium LMG 3301]
gi|444310388|ref|ZP_21146010.1| 30S ribosomal protein S2 [Ochrobactrum intermedium M86]
gi|239824316|gb|EEQ95884.1| ribosomal protein S2 [Ochrobactrum intermedium LMG 3301]
gi|443486196|gb|ELT48976.1| 30S ribosomal protein S2 [Ochrobactrum intermedium M86]
Length = 256
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 104/232 (44%), Gaps = 46/232 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M PYIYG R I DL Q+ LL +AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMAPYIYGDRNNIHILDLSQTVPLLHNALKIVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S +I A ++ W GM TN
Sbjct: 68 RVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLDELLAGEA 127
Query: 167 --------------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL RA+ + PDL+ + +T + AI EA ++ IP
Sbjct: 128 QGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAI----AIQEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
V ++DSNC+P+ I YP+PGNDD AI YC + A L G +Q + +
Sbjct: 184 VVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGI 235
>gi|328954580|ref|YP_004371914.1| 30S ribosomal protein S2 [Desulfobacca acetoxidans DSM 11109]
gi|328454904|gb|AEB10733.1| ribosomal protein S2 [Desulfobacca acetoxidans DSM 11109]
Length = 281
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 111/235 (47%), Gaps = 39/235 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K++ +A VH GH+ + +MKPYI+G R G I DL ++ +L + A +FV
Sbjct: 4 VTMKELLEAGVHFGHQTRRWNPKMKPYIFGARNGIYIIDLQKTVQLFKVAFDFVTERVAS 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
G +LFVG Q I + A C F W GM TN + + +++ RL
Sbjct: 64 GGKMLFVGTKKQAQDAIFEEANRCGMFFVNHRWLGGMLTNFQTIKKSIDRLKNFEQMKED 123
Query: 178 ------PDLVILT------------------NTL---TTVLEP---NPAIGEAAKMCIPT 207
P ILT N L V++P N A+ EA KM IP
Sbjct: 124 GSIKRFPKKEILTMEKKAAKLDKSLGGIKNMNGLPDAVFVVDPHKENIAVQEARKMQIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
V IVDSNC+P I Y +PGNDD AI+ A L+G+K + + L+ S+K
Sbjct: 184 VAIVDSNCDPTEIDYVIPGNDDAIRAIRLITSRIANACLEGQKLRAERLQAESDK 238
>gi|344199451|ref|YP_004783777.1| 30S ribosomal protein S2 [Acidithiobacillus ferrivorans SS3]
gi|343774895|gb|AEM47451.1| ribosomal protein S2 [Acidithiobacillus ferrivorans SS3]
Length = 250
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 110/229 (48%), Gaps = 39/229 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ + +A VH GH+ +M PY++G R I +L+ + +LR AL+FV I+ +
Sbjct: 5 VTMRALLEAGVHFGHQSRYWHPKMAPYLFGERNRIHIINLEHTLPMLRTALSFVEQISRK 64
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG Q +E+ A+ F + W G TN + + +++ RL +L
Sbjct: 65 HGRVLFVGTKRQAREAVEQEARRSSAFFVNQRWLGGTLTNFKTIRQSIRRLDELDQMAAD 124
Query: 181 ---------VILTNT------------------------LTTVLEPNPAIGEAAKMCIPT 207
+LT T + V N A+ EA K+ IP
Sbjct: 125 GTMEKLTKKEVLTLTRERDKLERSLGGIKDMNGLPDAIFVIDVGHENIAVLEARKLGIPV 184
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTL 256
+G+VDSNC+P LI YP+PGNDD AI+ Y + AIL G++ + L
Sbjct: 185 IGVVDSNCDPLLIDYPIPGNDDATRAIRLYASLVADAILDGRQGGESAL 233
>gi|188996518|ref|YP_001930769.1| 30S ribosomal protein S2 [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931585|gb|ACD66215.1| ribosomal protein S2 [Sulfurihydrogenibium sp. YO3AOP1]
Length = 294
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 47/230 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++++ +A VH GH + + +MKPYIY R G I DL ++ L R AL FV
Sbjct: 5 ISMRELLEAGVHFGHPVRRWNPKMKPYIYTKRNGIHIIDLSKTVPLFRQALEFVTEQVAN 64
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS------------------- 167
+LF+G Q +IE+ A+ C+ + W GMFTN
Sbjct: 65 GAEILFLGTKKQAQNIIEEEAKRCRAYYVNYKWLGGMFTNFATVKKSIAKLRKLQKMEAE 124
Query: 168 ---------------------EKLFRAVT---RLPDLVILTNTLTTVLEPNPAIGEAAKM 203
EK + + R+PD++ + +T + N A+ EA K+
Sbjct: 125 GVFEVLPKKEARTLMKQKEKLEKYLKGIVDMDRVPDIIFVVDT----VRENNAVTEANKL 180
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+ V I D+NC+P+ I YP+PGNDD AIQ A+++GKK ++
Sbjct: 181 GVRVVAIADTNCDPDKIDYPIPGNDDAIKAIQLITSKIADAVIEGKKMRE 230
>gi|374854465|dbj|BAL57346.1| 30S ribosomal protein S2 [uncultured gamma proteobacterium]
Length = 248
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 113/229 (49%), Gaps = 39/229 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++++ +A VH GH+ + +M P+IYGVR G I +L+++ LR+AL+F+ A
Sbjct: 4 VSMRELLEAGVHFGHQTRYWNPKMAPFIYGVRSGIHIINLEKTLPYLREALHFLEQTAAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G+VLF G +++ A C W G TN + ++V RL +L
Sbjct: 64 RGVVLFAGTKKTAQKAVQEEAVRCGMPYVNYRWLGGTLTNFRTIRQSVKRLKELETMRDD 123
Query: 183 --------------------LTNTLTTV--LEPNP-------------AIGEAAKMCIPT 207
L +L + +E P A+ EA K+ IP
Sbjct: 124 GTLQRFSKREALELMRELEKLERSLGGIKDMEELPDALFVLDVGHEYIAVREAQKLGIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTL 256
VG+VD+N +P+ I YP+PGNDD+ AIQ YC+ TAIL+GK ++ + +
Sbjct: 184 VGVVDTNNSPDGIDYPIPGNDDSIRAIQLYCRAAATAILEGKASRVELM 232
>gi|163746350|ref|ZP_02153708.1| 30S ribosomal protein S2 [Oceanibulbus indolifex HEL-45]
gi|161380235|gb|EDQ04646.1| 30S ribosomal protein S2 [Oceanibulbus indolifex HEL-45]
Length = 292
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 101/226 (44%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM PYIYG R G I DL Q+ +L DAL + + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMGPYIYGARNGIHIMDLTQTVPMLDDALKIIRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q + I + A+ C ++ W G TN + + +++ RL
Sbjct: 68 SVLFVGTKRQAAQPIAEAAEKCAQYYMNHRWLGGTLTNWQTVSQSINRLKNIDEQSERGF 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + L AI EA K+ IP
Sbjct: 128 EGLTKKERLGMERDQYKLEASLGGIREMGGRPDLLFVIDVKKEAL----AIAEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V +VD+NC+P+ + Y +PGNDD AI YC + A L G A+
Sbjct: 184 VVAVVDTNCSPDGVDYIIPGNDDAARAISLYCDLAARAALDGMSAQ 229
>gi|426401292|ref|YP_007020264.1| 30S ribosomal protein S2 [Candidatus Endolissoclinum patella L2]
gi|425857960|gb|AFX98996.1| ribosomal protein S2 [Candidatus Endolissoclinum patella L2]
Length = 256
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+ +A VH GH + +M+PYI+GVR I DL Q+ LL AL V I +G VL
Sbjct: 11 LLEAGVHFGHHTRRWNPKMEPYIFGVRNNVHILDLRQTVPLLHQALEAVRDIVANNGRVL 70
Query: 132 FVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------------- 166
FVG Q + +I K AQ+ ++ W GM TN
Sbjct: 71 FVGTKRQAADMIAKAAQESGQYYVNHRWLGGMLTNWKTISNSIKRLRELEERMEAGIDGL 130
Query: 167 -----------SEKLFRAVTRLPDLVILTNTLTTVLEPNP---AIGEAAKMCIPTVGIVD 212
+KL RA+ + ++ L N + V++ N AI EA + IP V I+D
Sbjct: 131 TKKETLGLSRERDKLGRALDGIKEMGGLPNIM-VVIDTNKESLAIQEANTLDIPVVAILD 189
Query: 213 SNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
SNC+P+ +TYP+PGNDD AI Y ++ A++ G KA+
Sbjct: 190 SNCDPDGLTYPIPGNDDAIRAIALYTELMGQAVIGGIKAE 229
>gi|395778287|ref|ZP_10458799.1| 30S ribosomal protein S2 [Bartonella elizabethae Re6043vi]
gi|423715456|ref|ZP_17689680.1| 30S ribosomal protein S2 [Bartonella elizabethae F9251]
gi|395417495|gb|EJF83832.1| 30S ribosomal protein S2 [Bartonella elizabethae Re6043vi]
gi|395429583|gb|EJF95644.1| 30S ribosomal protein S2 [Bartonella elizabethae F9251]
Length = 259
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 104/229 (45%), Gaps = 46/229 (20%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+ +A VH GH+ + +M PYIYG R I DL Q+ LL AL V+ R G +L
Sbjct: 11 LLEAGVHFGHQTHRWNPKMTPYIYGQRNNIHIIDLSQTVPLLHQALKLVSDTVARGGRIL 70
Query: 132 FVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------------- 166
FVG Q S +I A ++ W GM TN
Sbjct: 71 FVGTKRQASEIIADAANRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLDKILAAEAQGF 130
Query: 167 -----------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIPTVG 209
EKL RA+ + PDL+ + +T + N A+ EA ++ IP +
Sbjct: 131 TKKERLNLERDREKLNRALGGIKDMGSVPDLIFVIDTN----KENIALQEAKRLNIPVIA 186
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
I+D+NC+P+ +T+P+PGNDD AI YC +F A L G +Q + +
Sbjct: 187 IIDTNCDPDDVTHPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGV 235
>gi|163868101|ref|YP_001609305.1| 30S ribosomal protein S2 [Bartonella tribocorum CIP 105476]
gi|161017752|emb|CAK01310.1| 30S ribosomal protein S2 [Bartonella tribocorum CIP 105476]
Length = 296
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 104/229 (45%), Gaps = 46/229 (20%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+ +A VH GH+ + +M PYIYG R I DL Q+ LL AL V+ R G +L
Sbjct: 41 LLEAGVHFGHQTHRWNPKMTPYIYGQRNNIHIIDLAQTVPLLHQALKLVSDTVARGGRIL 100
Query: 132 FVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------------- 166
FVG Q S +I A ++ W GM TN
Sbjct: 101 FVGTKRQASEIIADAANRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLDKILAAEAQGF 160
Query: 167 -----------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIPTVG 209
EKL RA+ + PDL+ + +T + N A+ EA ++ IP +
Sbjct: 161 TKKERLNLERDREKLNRALGGIKDMGSVPDLIFVIDTN----KENIALQEAKRLGIPVIA 216
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
I+D+NC+P+ +T+P+PGNDD AI YC +F A L G +Q + +
Sbjct: 217 IIDTNCDPDDVTHPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGI 265
>gi|225627630|ref|ZP_03785667.1| ribosomal protein S2 [Brucella ceti str. Cudo]
gi|237815581|ref|ZP_04594578.1| ribosomal protein S2 [Brucella abortus str. 2308 A]
gi|294852501|ref|ZP_06793174.1| 30S ribosomal protein S2 [Brucella sp. NVSL 07-0026]
gi|225617635|gb|EEH14680.1| ribosomal protein S2 [Brucella ceti str. Cudo]
gi|237788879|gb|EEP63090.1| ribosomal protein S2 [Brucella abortus str. 2308 A]
gi|294821090|gb|EFG38089.1| 30S ribosomal protein S2 [Brucella sp. NVSL 07-0026]
Length = 266
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 110/253 (43%), Gaps = 53/253 (20%)
Query: 48 EPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLD 107
+PE N + D+ ++ + +A VH GH+ + +M P+IYG R I DL
Sbjct: 4 KPEKENKMALPDF-------SMRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLS 56
Query: 108 QSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN- 166
Q+ LL AL V+ R G VLFVG Q S +I A ++ W GM TN
Sbjct: 57 QTVPLLNSALKVVSDTVARGGRVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNW 116
Query: 167 -----------------------------------SEKLFRAVTRL------PDLVILTN 185
EKL RA+ + PDL+ + +
Sbjct: 117 KTISNSIQRLRKLDELLAGEAQGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIID 176
Query: 186 TLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAI 245
T + AI EA ++ IP V ++DSNC+P+ I YP+PGNDD AI YC + A
Sbjct: 177 TNKEAI----AIQEAKRLGIPVVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAA 232
Query: 246 LKGKKAKQDTLKL 258
L G +Q + +
Sbjct: 233 LDGIARQQGAMGI 245
>gi|395764640|ref|ZP_10445264.1| 30S ribosomal protein S2 [Bartonella sp. DB5-6]
gi|395414177|gb|EJF80626.1| 30S ribosomal protein S2 [Bartonella sp. DB5-6]
Length = 257
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 104/229 (45%), Gaps = 46/229 (20%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+ +A VH GH+ + +M PYIYG R I DL Q+ LL AL V+ R G +L
Sbjct: 11 LLEAGVHFGHQTHRWNPKMTPYIYGQRNNIHIIDLAQTVPLLHQALKLVSDTVARGGRIL 70
Query: 132 FVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------------- 166
FVG Q S +I A ++ W GM TN
Sbjct: 71 FVGTKRQASDIIADAANRSAQYYVNARWLGGMLTNWKTISHSIHRLRKLDKILAAEAQGF 130
Query: 167 -----------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIPTVG 209
EKL RA+ + PDL+ + +T + N A+ EA ++ IP +
Sbjct: 131 TKKERLNLERDREKLNRALGGIKDMGSVPDLIFIIDTN----KENIALQEAKRLGIPVIA 186
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
I+D+NC+P+ +T+P+PGNDD AI YC +F A L G +Q + +
Sbjct: 187 IIDTNCDPDNVTHPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGV 235
>gi|319405845|emb|CBI79477.1| 30S ribosomal protein S2 [Bartonella sp. AR 15-3]
Length = 287
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 104/232 (44%), Gaps = 46/232 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M PYIYG R I DL Q+ LL AL V+ G
Sbjct: 29 MRQLLEAGVHFGHQTHRWNPKMAPYIYGERNNIHIIDLSQTVPLLHQALKVVSDTVACGG 88
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S +I A ++ W GM TN + + ++ RL
Sbjct: 89 RVLFVGTKRQASDIISDAANRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLDKTLSSEI 148
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + N AI EA ++ IP
Sbjct: 149 QGFTKKERLNLERDRERLNRALGGIKDMGSVPDLMFIIDTN----KENIAIQEAKRLGIP 204
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
V ++D+NCNP+ I YP+PGNDD A+ +YC + A L G +Q T+ +
Sbjct: 205 VVAVIDTNCNPDNIDYPIPGNDDASRAVAFYCDLIARAALDGIARQQSTMGV 256
>gi|269792353|ref|YP_003317257.1| 30S ribosomal protein S2 [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269099988|gb|ACZ18975.1| ribosomal protein S2 [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 281
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 106/225 (47%), Gaps = 39/225 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + + VH GH+ + +MKPYI+ R G I DL ++ + L A +FV +A
Sbjct: 3 VVSMKQLLECGVHFGHQTRRWNPKMKPYIFTERNGIYIIDLQKTVKGLERAYSFVREVAK 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G +LFVG Q I A C +F + W G+ TN + R V R+ +L +
Sbjct: 63 EGGSMLFVGTKRQAQEPIRNEALRCGQFYINQRWLGGLLTNFATIRRRVNRMVELQKMEA 122
Query: 186 TLTT------------------------------------VLEP---NPAIGEAAKMCIP 206
T +++P N AI EAAK+ IP
Sbjct: 123 DGTINRYPKKEIIQLRKEREKLEKYLSGIKDMRDVPDALFIIDPRRENIAILEAAKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V IVD+NC+P LITYP+PGNDD AI+ + +A ++G++
Sbjct: 183 VVAIVDTNCDPELITYPIPGNDDAIRAIELITGLMASAFIEGRQG 227
>gi|197105243|ref|YP_002130620.1| 30S ribosomal protein S2 [Phenylobacterium zucineum HLK1]
gi|238690150|sp|B4RBZ4.1|RS2_PHEZH RecName: Full=30S ribosomal protein S2
gi|196478663|gb|ACG78191.1| 30S ribosomal protein S2 [Phenylobacterium zucineum HLK1]
Length = 295
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 100/227 (44%), Gaps = 46/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A H GH+ + +M YI+G R I DL QS LL AL V +A G
Sbjct: 8 MRQLLEAGAHFGHQTHRWNPKMDKYIFGARSNIHIIDLSQSIPLLHQALVKVREVAAGGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
+LFVG Q S I A+ C ++ W G TN + ++ RL
Sbjct: 68 RILFVGTKRQASEPIATAAKRCAQYYVNHRWLGGTLTNWRTVSNSIARLRELESVLGGEG 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA K+ IP
Sbjct: 128 QGRSKKELLQLTRERDKLELSLGGIKDMGGIPDLMFVIDTNKEAI----AIQEARKLNIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+ I+D+NCNP+ ITYP+PGNDD AIQ YC + AIL G A Q
Sbjct: 184 VIAILDTNCNPDGITYPIPGNDDAARAIQLYCDLMADAILDGLAAGQ 230
>gi|337268723|ref|YP_004612778.1| 30S ribosomal protein S2 [Mesorhizobium opportunistum WSM2075]
gi|336029033|gb|AEH88684.1| ribosomal protein S2 [Mesorhizobium opportunistum WSM2075]
Length = 260
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 104/232 (44%), Gaps = 46/232 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A +H GH+ + +M PYIYG R I DL Q+ LL AL V+ + G
Sbjct: 8 MRQLLEAGIHFGHQTHRWNPKMAPYIYGARNNIHIIDLSQTVPLLHQALKQVSDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S ++ AQ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASDIVADAAQRSAQYYVNSRWLGGMLTNWKTISNSIQRLRKLDEMLAGEA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 QGLTKKERLNLDREREKLDKALGGIKDMGSTPDLMFVIDTNKEAI----AILEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
V I+DSNC+P+ I +P+PGNDD AIQ YC + A + G +Q L +
Sbjct: 184 VVAIIDSNCDPDKIDFPIPGNDDAARAIQLYCDLIAKAAIDGIARQQGALGV 235
>gi|209573723|sp|A9ISJ8.2|RS2_BART1 RecName: Full=30S ribosomal protein S2
Length = 266
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 104/229 (45%), Gaps = 46/229 (20%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+ +A VH GH+ + +M PYIYG R I DL Q+ LL AL V+ R G +L
Sbjct: 11 LLEAGVHFGHQTHRWNPKMTPYIYGQRNNIHIIDLAQTVPLLHQALKLVSDTVARGGRIL 70
Query: 132 FVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------------- 166
FVG Q S +I A ++ W GM TN
Sbjct: 71 FVGTKRQASEIIADAANRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLDKILAAEAQGF 130
Query: 167 -----------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIPTVG 209
EKL RA+ + PDL+ + +T + N A+ EA ++ IP +
Sbjct: 131 TKKERLNLERDREKLNRALGGIKDMGSVPDLIFVIDTN----KENIALQEAKRLGIPVIA 186
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
I+D+NC+P+ +T+P+PGNDD AI YC +F A L G +Q + +
Sbjct: 187 IIDTNCDPDDVTHPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGI 235
>gi|381166876|ref|ZP_09876089.1| 30S ribosomal protein S2 [Phaeospirillum molischianum DSM 120]
gi|380683928|emb|CCG40901.1| 30S ribosomal protein S2 [Phaeospirillum molischianum DSM 120]
Length = 265
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 47/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + +M PY++GVR G I DL QS +L + V + G
Sbjct: 8 MRQLVEAGVHFGHNTRRWNPKMAPYLFGVRNGIHIIDLQQSVPMLHRGMQAVRDVTAAGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR------------ 176
VLFVG Q S ++ ++A+ C ++ W GM TN + + +++ R
Sbjct: 68 RVLFVGTKRQASEIVAESARRCGQYFVNHRWLGGMLTNWKTISQSIRRLRELDEQLSTGA 127
Query: 177 -------------------------------LPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
LPD++ + +T L A+ EA K+ I
Sbjct: 128 LSGLTKKEQLNLTRERDKLERALGGIKEMGGLPDILFIIDTNKEAL----AVQEANKLGI 183
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
P V ++DSN +P I++P+PGNDD AIQ YC + A+L G +A+
Sbjct: 184 PVVAVIDSNSDPQGISFPIPGNDDAIRAIQTYCDLMSGAVLDGIQAE 230
>gi|410614328|ref|ZP_11325376.1| small subunit ribosomal protein S2 [Glaciecola psychrophila 170]
gi|410166163|dbj|GAC39265.1| small subunit ribosomal protein S2 [Glaciecola psychrophila 170]
Length = 243
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 114/237 (48%), Gaps = 42/237 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +ALNFV IA +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGSRNKVHIINLEKTVPMFNEALNFVGGIASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G +LFVG S ++ A C +F + W GM TN + + +++ RL +L
Sbjct: 64 KGKILFVGTKRAASDAVKDAADKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKELEQQSQD 123
Query: 181 -----------VILTNTLTT-------------------VLEPNP---AIGEAAKMCIPT 207
++LT +T V++ + AI EA + IP
Sbjct: 124 GTFEKLTKKEVLMLTREMTKLETSLGGIKNMGGLPDVLFVVDADHEHIAITEAGNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQE 264
V IVD+N NP+ + Y VPGNDD A+Q Y A++ G + L+ +EK E
Sbjct: 184 VSIVDTNSNPDGVDYIVPGNDDAIRAVQLYLNAAADAVING---RDQNLEAQAEKGE 237
>gi|13470846|ref|NP_102415.1| 30S ribosomal protein S2 [Mesorhizobium loti MAFF303099]
gi|25009218|sp|Q98MB2.1|RS2_RHILO RecName: Full=30S ribosomal protein S2
gi|14021589|dbj|BAB48201.1| 30S ribosomal protein S2 [Mesorhizobium loti MAFF303099]
Length = 260
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 104/232 (44%), Gaps = 46/232 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A +H GH+ + +M PYIYG R I DL Q+ LL AL V+ + G
Sbjct: 8 MRQLLEAGIHFGHQTHRWNPKMAPYIYGARNNIHIIDLSQTVPLLHQALKQVSDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S ++ AQ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASDIVADAAQRSAQYYVNSRWLGGMLTNWKTISNSIQRLRKLDEMLAGEA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 QGLTKKERLNLDREREKLDKALGGIKDMGSTPDLMFVIDTNKEAI----AILEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
V I+DSNC+P+ I +P+PGNDD AIQ YC + A + G +Q L +
Sbjct: 184 VVAIIDSNCDPDKIDFPIPGNDDAARAIQLYCDLIAKAAIDGIARQQGALGV 235
>gi|240850304|ref|YP_002971697.1| 30S ribosomal protein S2 [Bartonella grahamii as4aup]
gi|240267427|gb|ACS51015.1| 30S ribosomal protein S2 [Bartonella grahamii as4aup]
Length = 259
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 104/229 (45%), Gaps = 46/229 (20%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+ +A VH GH+ + +M PYIYG R I DL Q+ LL AL V+ R G +L
Sbjct: 11 LLEAGVHFGHQTHRWNPKMTPYIYGQRNNIHIIDLAQTVPLLHQALKLVSDTVARGGRIL 70
Query: 132 FVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------------- 166
FVG Q S +I A ++ W GM TN
Sbjct: 71 FVGTKRQASDIIADAANRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLDKILAAEAQGF 130
Query: 167 -----------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIPTVG 209
EKL RA+ + PDL+ + +T + N A+ EA ++ IP +
Sbjct: 131 TKKERLNLERDREKLNRALGGIKDMGSVPDLIFVIDTN----KENIALQEAKRLGIPVIA 186
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
I+D+NC+P+ +T+P+PGNDD AI YC +F A L G +Q + +
Sbjct: 187 IIDTNCDPDDVTHPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGI 235
>gi|395786132|ref|ZP_10465859.1| 30S ribosomal protein S2 [Bartonella tamiae Th239]
gi|423716975|ref|ZP_17691165.1| 30S ribosomal protein S2 [Bartonella tamiae Th307]
gi|395422430|gb|EJF88626.1| 30S ribosomal protein S2 [Bartonella tamiae Th239]
gi|395429049|gb|EJF95124.1| 30S ribosomal protein S2 [Bartonella tamiae Th307]
Length = 265
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 105/232 (45%), Gaps = 46/232 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M PYIYG R I DL Q+ LL AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMAPYIYGQRNNIHIIDLAQTVPLLHQALKVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S ++ +A ++ W GM TN
Sbjct: 68 RVLFVGTKRQASEIVADSANRSAQYYVNARWLGGMLTNWKTISNSIQRLRKVDEILSDEA 127
Query: 167 --------------SEKLFRA------VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL RA + +PDL+ + +T + AI EA ++ IP
Sbjct: 128 AGFTKKERLNLDREREKLDRALGGIKDMGSIPDLIFVIDTNKEAI----AIQEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
V ++D+NC+P+ I YP+PGNDD AI YC + A L G +Q ++ +
Sbjct: 184 VVAVIDTNCDPDNIDYPIPGNDDASRAISLYCDLIARAALDGIARQQGSMGV 235
>gi|357417898|ref|YP_004930918.1| 30S ribosomal protein S2 [Pseudoxanthomonas spadix BD-a59]
gi|355335476|gb|AER56877.1| 30S ribosomal protein S2 [Pseudoxanthomonas spadix BD-a59]
Length = 260
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 113/226 (50%), Gaps = 43/226 (19%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++ M +A VH GH+ + +M PYI+G R I +L+++ L DA+NF++ IA +
Sbjct: 4 ITMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTLPLFVDAMNFISAIAQK 63
Query: 127 DGIVLFVG--QSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI-- 182
G +LF+G +SA++S I++ A+ C T+ W G TN + ++V RL +L
Sbjct: 64 RGTILFIGTKRSARDS--IKEEAERCNMPYMTQRWLGGTLTNFATVKKSVARLKELEAAE 121
Query: 183 ----------------------LTNTLTTVLEPNP---------------AIGEAAKMCI 205
L +L + E N AI EA K+ I
Sbjct: 122 TDGTFEKLVKHEVLGLRRERDKLLASLGGIKEMNRLPDALFVIDIGHEDIAIKEAKKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
P V +VDSN +P L+ YP+PGNDD A+Q Y + A+L+GK A
Sbjct: 182 PVVAVVDSNYDPALVDYPIPGNDDAIRAVQLYARAAADAVLEGKAA 227
>gi|357028509|ref|ZP_09090543.1| 30S ribosomal protein S2 [Mesorhizobium amorphae CCNWGS0123]
gi|355538486|gb|EHH07731.1| 30S ribosomal protein S2 [Mesorhizobium amorphae CCNWGS0123]
Length = 260
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 104/232 (44%), Gaps = 46/232 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A +H GH+ + +M PYIYG R I DL Q+ LL AL V+ + G
Sbjct: 8 MRQLLEAGIHFGHQTHRWNPKMAPYIYGARNNIHIIDLSQTVPLLHQALKQVSDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S ++ AQ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASDIVADAAQRSAQYYVNSRWLGGMLTNWKTISNSIQRLRKLDELLAGEA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 QGLTKKERLNLDREREKLDKALGGIKDMGSTPDLMFVIDTNKEAI----AILEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
V I+DSNC+P+ I +P+PGNDD AIQ YC + A + G +Q L +
Sbjct: 184 VVAIIDSNCDPDKIDFPIPGNDDAARAIQLYCDLIAKAAIDGIARQQGALGV 235
>gi|410632359|ref|ZP_11343020.1| small subunit ribosomal protein S2 [Glaciecola arctica BSs20135]
gi|410148129|dbj|GAC19887.1| small subunit ribosomal protein S2 [Glaciecola arctica BSs20135]
Length = 243
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 114/237 (48%), Gaps = 42/237 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +ALNFV IA +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGSRNKVHIINLEKTVPMFNEALNFVGGIASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G +LFVG S ++ A C +F + W GM TN + + +++ RL +L
Sbjct: 64 KGKILFVGTKRAASDAVKDAADKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKELEQQSQD 123
Query: 181 -----------VILTNTLTT-------------------VLEPNP---AIGEAAKMCIPT 207
++LT +T V++ + AI EA + IP
Sbjct: 124 GTFEKLTKKEVLMLTREMTKLETSLGGIKNMGGLPDVLFVVDADHEHIAITEAGNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQE 264
V IVD+N NP+ + Y VPGNDD A+Q Y A++ G + L+ +EK E
Sbjct: 184 VSIVDTNSNPDGVDYIVPGNDDAIRAVQLYLNAAADAVIAG---RDQNLEAQAEKGE 237
>gi|121602757|ref|YP_988892.1| 30S ribosomal protein S2 [Bartonella bacilliformis KC583]
gi|421760694|ref|ZP_16197509.1| 30S ribosomal protein S2 [Bartonella bacilliformis INS]
gi|166225242|sp|A1USD9.1|RS2_BARBK RecName: Full=30S ribosomal protein S2
gi|120614934|gb|ABM45535.1| ribosomal protein S2 [Bartonella bacilliformis KC583]
gi|411174783|gb|EKS44813.1| 30S ribosomal protein S2 [Bartonella bacilliformis INS]
Length = 271
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 104/232 (44%), Gaps = 46/232 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M YIYG R I DL Q+ LL AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPKMARYIYGQRNNVHIIDLSQTVPLLYQALKLVSDTVVRGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S +I A ++ W GM TN
Sbjct: 68 RVLFVGTKRQASDIIADAASRSAQYHVNARWLGGMLTNWKTISNSIHRLRKLDKILAAEA 127
Query: 167 --------------SEKLFRAVT------RLPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL RA+ +PDL+ + +T + N AI EA ++ IP
Sbjct: 128 RGFTKKERLNLERDREKLNRALGGIKDMGSIPDLMFVIDTN----KENIAIQEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
V I+D+NC+P+ I YP+PGNDD AI YC +F A L G +Q + +
Sbjct: 184 VVAIIDTNCDPDGIDYPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGV 235
>gi|395784459|ref|ZP_10464297.1| 30S ribosomal protein S2 [Bartonella melophagi K-2C]
gi|395423709|gb|EJF89903.1| 30S ribosomal protein S2 [Bartonella melophagi K-2C]
Length = 258
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 105/232 (45%), Gaps = 46/232 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M PYIYG R I DL Q+ LL AL V+ + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPKMAPYIYGQRNNIHIIDLAQTVPLLYQALKLVSDTVAQGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S +I A ++ W GM TN
Sbjct: 68 RVLFVGTKRQASDIIADAASRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLDKILTTEA 127
Query: 167 --------------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL RA+ + PDL+ + +T + N AI EA ++ +P
Sbjct: 128 QGFTKKERLNLERDREKLNRALGGIKDMGSVPDLMFIVDTN----KENIAIQEAKRLGVP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
+ IVD+NC+P+ I YP+PGNDD AI YC + A L G +Q T+ +
Sbjct: 184 VIAIVDTNCDPDGIDYPIPGNDDASRAISLYCDLVARAALDGIARQQGTMNI 235
>gi|395780025|ref|ZP_10460492.1| 30S ribosomal protein S2 [Bartonella washoensis 085-0475]
gi|423711359|ref|ZP_17685679.1| 30S ribosomal protein S2 [Bartonella washoensis Sb944nv]
gi|395415273|gb|EJF81708.1| 30S ribosomal protein S2 [Bartonella washoensis Sb944nv]
gi|395419292|gb|EJF85592.1| 30S ribosomal protein S2 [Bartonella washoensis 085-0475]
Length = 257
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 103/229 (44%), Gaps = 46/229 (20%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+ +A VH GH+ + +M PYIYG R I DL Q+ LL AL V+ R G +L
Sbjct: 11 LLEAGVHFGHQTHRWNPKMAPYIYGQRNNIHIIDLAQTVPLLHQALKLVSDTVARGGRIL 70
Query: 132 FVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------------- 166
FVG Q S ++ A ++ W GM TN
Sbjct: 71 FVGTKRQASEIVADAANRSAQYYVNARWLGGMLTNWKTISHSIHRLRKLDKILAAEAQGF 130
Query: 167 -----------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIPTVG 209
EKL RA+ + PDL+ + +T + N AI EA ++ IP +
Sbjct: 131 TKKERLNLERDREKLNRALGGIKDMGSVPDLIFIVDTN----KENIAIQEAKRLGIPVIA 186
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
I+D+NC+P+ I +P+PGNDD AI YC +F A L G +Q + +
Sbjct: 187 IIDTNCDPDNIDHPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGV 235
>gi|395789916|ref|ZP_10469424.1| 30S ribosomal protein S2 [Bartonella taylorii 8TBB]
gi|395428138|gb|EJF94220.1| 30S ribosomal protein S2 [Bartonella taylorii 8TBB]
Length = 257
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 104/229 (45%), Gaps = 46/229 (20%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+ +A VH GH+ + +M PYIYG R I DL Q+ LL AL V+ + G VL
Sbjct: 11 LLEAGVHFGHQTHRWNPKMTPYIYGQRNNIHIIDLAQTVPLLHQALKLVSDTVAQGGRVL 70
Query: 132 FVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------------- 166
FVG Q S +I A ++ W GM TN
Sbjct: 71 FVGTKRQASDIIADAANRSAQYYVNARWLGGMLTNWKTISHSIHRLRKLDKILAAEAQGF 130
Query: 167 -----------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIPTVG 209
EKL RA+ + PDL+ + +T + N AI EA ++ IP +
Sbjct: 131 TKKERLNLERDREKLNRALGGIKDMGSVPDLIFIIDTN----KENIAIQEAKRLGIPVIA 186
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
I+D+NC+P+ +T+P+PGNDD AI YC +F A L G +Q + +
Sbjct: 187 IIDTNCDPDNVTHPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGV 235
>gi|322420126|ref|YP_004199349.1| 30S ribosomal protein S2 [Geobacter sp. M18]
gi|320126513|gb|ADW14073.1| ribosomal protein S2 [Geobacter sp. M18]
Length = 255
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 108/230 (46%), Gaps = 39/230 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K++ +A VH GH+ + +MKPYI+G R G I DL ++ L ++A +FV A
Sbjct: 4 ITMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKNAYSFVTDAAQS 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLP--DLVILT 184
VLFVG Q + + AQ C +F W GM TN + +++ RL D +I
Sbjct: 64 GDTVLFVGTKKQAQDSVAEEAQRCGQFFVNDRWLGGMLTNFSTVKQSIDRLKRLDAMIAD 123
Query: 185 NTLTT----------------------------------VLEPNP---AIGEAAKMCIPT 207
T+ V++P A+ EA K+ IP
Sbjct: 124 GTIEAYTKKEQLKLAKEREKLEKTLGGIKGMGKVPGVLFVVDPKNEEIAVSEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLK 257
V IVD+NC+P+ I Y +PGNDD AI+ A+L+G +A+ L+
Sbjct: 184 VAIVDTNCDPDDINYVIPGNDDAIRAIRLLTSKMADAVLEGAQARNARLQ 233
>gi|282855673|ref|ZP_06264982.1| ribosomal protein S2 [Pyramidobacter piscolens W5455]
gi|282586473|gb|EFB91732.1| ribosomal protein S2 [Pyramidobacter piscolens W5455]
Length = 271
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 109/228 (47%), Gaps = 41/228 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + + VH GH+ + +MKPYI+ R G I DL ++ + L A +FV +A
Sbjct: 2 SVVSMKQLLECGVHFGHQTRRWNPKMKPYIFTERNGVYIIDLQKTVKGLEKAYDFVRSVA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL------- 177
G VLFVG Q I + AQ C +F + W G+ TN + + V R+
Sbjct: 62 KDGGSVLFVGTKRQAQDTIREEAQRCGQFYINQRWLGGLMTNFATIRKRVQRMIELEKHE 121
Query: 178 ------------------------------PDLVILTNTLTTVLEP---NPAIGEAAKMC 204
D+ L + L V++P N A+ EA K+
Sbjct: 122 ADNDWGDYTKKEISLFRKELAKLEKYLLGIKDMRALPDAL-FVIDPRRENIAVMEARKLH 180
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
+P + IVD+NC+P +I YP+PGNDD AI+ C + A+++G+ +
Sbjct: 181 VPVISIVDTNCDPEMIDYPIPGNDDAIRAIKLICGLMANAVIEGRGGE 228
>gi|319783674|ref|YP_004143150.1| 30S ribosomal protein S2 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169562|gb|ADV13100.1| ribosomal protein S2 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 262
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 104/232 (44%), Gaps = 46/232 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A +H GH+ + +M PYIYG R I DL Q+ LL AL V+ + G
Sbjct: 8 MRQLLEAGIHFGHQTHRWNPKMAPYIYGARNNIHIIDLSQTVPLLHQALKQVSDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S ++ AQ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASDIVADAAQRSAQYYVNSRWLGGMLTNWKTISNSIQRLRKLDEMLAGEA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 QGLTKKERLNLDREREKLDKALGGIKDMGSTPDLMFVIDTNKEAI----AILEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
V I+DSNC+P+ I +P+PGNDD AIQ YC + A + G +Q L +
Sbjct: 184 VVAIIDSNCDPDKIDFPIPGNDDAARAIQLYCDLIAKAAIDGIARQQGALGV 235
>gi|319899043|ref|YP_004159136.1| 30S ribosomal protein S2 [Bartonella clarridgeiae 73]
gi|319403007|emb|CBI76562.1| 30S ribosomal protein S2 [Bartonella clarridgeiae 73]
Length = 279
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 105/232 (45%), Gaps = 46/232 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M YIYG R I DL Q+ LL AL V+ R G
Sbjct: 29 MRQLLEAGVHFGHQTHRWNPKMASYIYGQRSNIHIIDLSQTVPLLHQALKAVSDTVARGG 88
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S +I A ++ W GM TN
Sbjct: 89 RVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMLTNWKTVSNSIHRLRKLDKTLASDV 148
Query: 167 --------------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL RA+ + PDL+ + +T + N AI EA ++ IP
Sbjct: 149 QGFTKKERLKLERDREKLNRALGGIKDMGSVPDLMFIIDTN----KENIAIQEAKRLGIP 204
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
V I+D+NC+P+ I YP+PGNDD A+ +YC + A L G +Q T+ +
Sbjct: 205 VVAIIDTNCDPDNIDYPIPGNDDASRAVSFYCDLIARAALDGIARQQGTMGV 256
>gi|359792128|ref|ZP_09294951.1| 30S ribosomal protein S2 [Mesorhizobium alhagi CCNWXJ12-2]
gi|359251812|gb|EHK55138.1| 30S ribosomal protein S2 [Mesorhizobium alhagi CCNWXJ12-2]
Length = 268
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 105/233 (45%), Gaps = 47/233 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A +H GH+ + +M PYIYG R + DL Q+ +L AL V+ + + G
Sbjct: 8 MRQLLEAGIHFGHQTHRWNPKMAPYIYGARNNIHVIDLSQTVPMLHQALKQVSDVVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S +I AQ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASDIIADAAQRSAQYYVNSRWLGGMLTNWKTISNSIQRLRKLDEILAGEG 127
Query: 178 --------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCI 205
PDL+ + +T + AI EA ++ I
Sbjct: 128 SGGLTKKELLNLQREREKLDKALGGIKDMGSTPDLMFVIDTNKEAI----AILEAKRLGI 183
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
P V ++DSNC+P+ I +P+PGNDD AIQ YC + A + G +Q L +
Sbjct: 184 PVVAVIDSNCDPDKIDFPIPGNDDAARAIQLYCDLIAKAAIDGIARQQGALGV 236
>gi|221133314|ref|ZP_03559619.1| ribosomal protein S2 [Glaciecola sp. HTCC2999]
Length = 242
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ L +ALN+V+ +A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNNALNYVSSVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG +++ A C +F + W GM TN + + +++ RL +L
Sbjct: 64 KGKVLFVGTKRAAGEAVKEAAIKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKELEAQSQD 123
Query: 181 ----------VILTNTLTTVLEPN-----------------------PAIGEAAKMCIPT 207
V++ T LE + A+ EA + IP
Sbjct: 124 GTFDKLTKKEVLMLQREMTKLESSLGGIKDMGGLPDVIFVIDADHEHIAVTEARNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
VG+VD+N NP+ + Y +PGNDD AIQ Y A++ G+
Sbjct: 184 VGVVDTNSNPDGVDYIIPGNDDAIRAIQLYLNAAADAVISGR 225
>gi|395781533|ref|ZP_10461951.1| 30S ribosomal protein S2 [Bartonella rattimassiliensis 15908]
gi|395420966|gb|EJF87224.1| 30S ribosomal protein S2 [Bartonella rattimassiliensis 15908]
Length = 258
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 104/226 (46%), Gaps = 40/226 (17%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+ +A VH GH+ + +M PYIYG R I DL Q+ LL AL V+ R G +L
Sbjct: 11 LLEAGVHFGHQTHRWNPKMTPYIYGQRNNIHIIDLSQTVPLLHQALKLVSDTVARGGRIL 70
Query: 132 FVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------------- 166
FVG Q S +I A ++ W GM TN
Sbjct: 71 FVGTKRQASDIIADAANRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLDKILAAEAQGF 130
Query: 167 -----------SEKLFRAVTRLPDLVILTNTLTTVLEPNP---AIGEAAKMCIPTVGIVD 212
EKL RA+ + D+ + + L V++ N A+ EA ++ IP + I+D
Sbjct: 131 TKKERLNLERDREKLNRALGGIKDMGSIPD-LIFVIDTNKEKIALQEAKRLGIPVIAIID 189
Query: 213 SNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
+NC+P+ +T+P+PGNDD AI YC +F A L G +Q + +
Sbjct: 190 TNCDPDDVTHPIPGNDDASRAISLYCDLFARAALDGIARQQGAMDI 235
>gi|148558832|ref|YP_001259080.1| 30S ribosomal protein S2 [Brucella ovis ATCC 25840]
gi|209573651|sp|A5VQT3.1|RS2_BRUO2 RecName: Full=30S ribosomal protein S2
gi|148370089|gb|ABQ60068.1| ribosomal protein S2 [Brucella ovis ATCC 25840]
Length = 254
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 102/232 (43%), Gaps = 46/232 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M P+IYG R I DL Q+ LL AL V+ R G
Sbjct: 6 MRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVSDTVARGG 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S +I A ++ W GM TN + + ++ RL
Sbjct: 66 RVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLDELLAGEA 125
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 126 QGFTKKERLNLEREREKLDRTLGGIKDMGSVPDLMFIIDTNKEAI----AIQEAKRLGIP 181
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
V ++DSNC+P+ I YP+PGNDD AI YC + A L G +Q + +
Sbjct: 182 VVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGI 233
>gi|49475410|ref|YP_033451.1| 30S ribosomal protein S2 [Bartonella henselae str. Houston-1]
gi|61215541|sp|Q6G5C9.1|RS2_BARHE RecName: Full=30S ribosomal protein S2
gi|49238216|emb|CAF27426.1| 30S ribosomal protein s2 [Bartonella henselae str. Houston-1]
Length = 257
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 103/229 (44%), Gaps = 46/229 (20%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+ +A VH GH+ + +M PYIYG R I DL Q+ LL AL V+ R G +L
Sbjct: 11 LLEAGVHFGHQTHRWNPKMTPYIYGQRNNIHIIDLAQTVPLLHQALKLVSDTVARGGRIL 70
Query: 132 FVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------------- 166
FVG Q S +I A ++ W GM TN
Sbjct: 71 FVGTKRQASDIIADAANRSAQYYVNARWLGGMLTNWKTISNSIQRLRKLDKILAAEAQGF 130
Query: 167 -----------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIPTVG 209
EKL RA+ + PDL+ + +T + N AI EA ++ IP +
Sbjct: 131 TKKERLNLERDREKLNRALGGIKDMGSVPDLIFIIDTN----KENIAIQEAKRLGIPVIA 186
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
I+D+NC+P+ + +P+PGNDD AI YC +F A L G +Q + +
Sbjct: 187 IIDTNCDPDNVDHPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGI 235
>gi|306841885|ref|ZP_07474565.1| ribosomal protein S2 [Brucella sp. BO2]
gi|306288015|gb|EFM59417.1| ribosomal protein S2 [Brucella sp. BO2]
Length = 254
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 103/232 (44%), Gaps = 46/232 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M P+IYG R I DL Q+ LL AL V+ R G
Sbjct: 6 MRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVSDTVARGG 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S +I A ++ W GM TN
Sbjct: 66 RVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLDELLAGEA 125
Query: 167 --------------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL RA+ + PDL+ + +T + AI EA ++ IP
Sbjct: 126 QGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAI----AIQEAKRLGIP 181
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
V ++DSNC+P+ I YP+PGNDD AI YC + A L G +Q + +
Sbjct: 182 VVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGI 233
>gi|384445218|ref|YP_005603937.1| 30S ribosomal protein S2 [Brucella melitensis NI]
gi|349743209|gb|AEQ08752.1| 30S ribosomal protein S2 [Brucella melitensis NI]
Length = 249
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 103/232 (44%), Gaps = 46/232 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M P+IYG R I DL Q+ LL AL V+ R G
Sbjct: 1 MRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVSDTVARGG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S +I A ++ W GM TN
Sbjct: 61 RVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLDELLAGEA 120
Query: 167 --------------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL RA+ + PDL+ + +T + AI EA ++ IP
Sbjct: 121 QGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAI----AIQEAKRLGIP 176
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
V ++DSNC+P+ I YP+PGNDD AI YC + A L G +Q + +
Sbjct: 177 VVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGI 228
>gi|253700110|ref|YP_003021299.1| 30S ribosomal protein S2 [Geobacter sp. M21]
gi|259495215|sp|C6E512.1|RS2_GEOSM RecName: Full=30S ribosomal protein S2
gi|251774960|gb|ACT17541.1| ribosomal protein S2 [Geobacter sp. M21]
Length = 255
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 108/230 (46%), Gaps = 39/230 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K++ +A VH GH+ + +MKPYI+G R G I DL ++ L ++A +FV A
Sbjct: 4 ITMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKNAYSFVTDAAQA 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLP--DLVILT 184
VLFVG Q + + AQ C +F W GM TN + +++ RL D +I
Sbjct: 64 GETVLFVGTKKQAQDSVAEEAQRCGQFYVNDRWLGGMLTNFSTVKQSIDRLKRLDAMIAD 123
Query: 185 NTLTT----------------------------------VLEPNP---AIGEAAKMCIPT 207
T+ V++P A+ EA K+ IP
Sbjct: 124 GTIEAYTKKEQLKLAKEREKLEKTLGGIKGMGKVPGVLFVVDPKNEEIAVSEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLK 257
V IVD+NC+P+ I Y +PGNDD AI+ A+L+G +A+ L+
Sbjct: 184 VAIVDTNCDPDDINYVIPGNDDAIRAIRLLTSKMADAVLEGGQARNARLQ 233
>gi|23502040|ref|NP_698167.1| 30S ribosomal protein S2 [Brucella suis 1330]
gi|62290075|ref|YP_221868.1| 30S ribosomal protein S2 [Brucella abortus bv. 1 str. 9-941]
gi|82700001|ref|YP_414575.1| 30S ribosomal protein S2 [Brucella melitensis biovar Abortus 2308]
gi|161619113|ref|YP_001593000.1| 30S ribosomal protein S2 [Brucella canis ATCC 23365]
gi|163843426|ref|YP_001627830.1| 30S ribosomal protein S2 [Brucella suis ATCC 23445]
gi|189024314|ref|YP_001935082.1| 30S ribosomal protein S2 [Brucella abortus S19]
gi|225852659|ref|YP_002732892.1| 30S ribosomal protein S2 [Brucella melitensis ATCC 23457]
gi|256263847|ref|ZP_05466379.1| ribosomal protein S2 [Brucella melitensis bv. 2 str. 63/9]
gi|256369587|ref|YP_003107097.1| 30S ribosomal protein S2 [Brucella microti CCM 4915]
gi|260546625|ref|ZP_05822364.1| ribosomal protein S2 [Brucella abortus NCTC 8038]
gi|260565583|ref|ZP_05836067.1| ribosomal protein S2 [Brucella melitensis bv. 1 str. 16M]
gi|260566305|ref|ZP_05836775.1| ribosomal protein S2 [Brucella suis bv. 4 str. 40]
gi|260754903|ref|ZP_05867251.1| 30S ribosomal protein S2 [Brucella abortus bv. 6 str. 870]
gi|260758120|ref|ZP_05870468.1| 30S ribosomal protein S2 [Brucella abortus bv. 4 str. 292]
gi|260761946|ref|ZP_05874289.1| 30S ribosomal protein S2 [Brucella abortus bv. 2 str. 86/8/59]
gi|260883915|ref|ZP_05895529.1| 30S ribosomal protein S2 [Brucella abortus bv. 9 str. C68]
gi|261214155|ref|ZP_05928436.1| 30S ribosomal protein S2 [Brucella abortus bv. 3 str. Tulya]
gi|261219509|ref|ZP_05933790.1| 30S ribosomal protein S2 [Brucella ceti M13/05/1]
gi|261222328|ref|ZP_05936609.1| 30S ribosomal protein S2 [Brucella ceti B1/94]
gi|261317795|ref|ZP_05956992.1| 30S ribosomal protein S2 [Brucella pinnipedialis B2/94]
gi|261322004|ref|ZP_05961201.1| 30S ribosomal protein S2 [Brucella ceti M644/93/1]
gi|261325251|ref|ZP_05964448.1| 30S ribosomal protein S2 [Brucella neotomae 5K33]
gi|261752467|ref|ZP_05996176.1| 30S ribosomal protein S2 [Brucella suis bv. 5 str. 513]
gi|261755126|ref|ZP_05998835.1| 30S ribosomal protein S2 [Brucella suis bv. 3 str. 686]
gi|261758351|ref|ZP_06002060.1| ribosomal protein S2 [Brucella sp. F5/99]
gi|265984219|ref|ZP_06096954.1| 30S ribosomal protein S2 [Brucella sp. 83/13]
gi|265988826|ref|ZP_06101383.1| 30S ribosomal protein S2 [Brucella pinnipedialis M292/94/1]
gi|265991241|ref|ZP_06103798.1| 30S ribosomal protein S2 [Brucella melitensis bv. 1 str. Rev.1]
gi|265995077|ref|ZP_06107634.1| 30S ribosomal protein S2 [Brucella melitensis bv. 3 str. Ether]
gi|265998292|ref|ZP_06110849.1| 30S ribosomal protein S2 [Brucella ceti M490/95/1]
gi|297248473|ref|ZP_06932191.1| 30S ribosomal protein S2 [Brucella abortus bv. 5 str. B3196]
gi|306837973|ref|ZP_07470831.1| ribosomal protein S2 [Brucella sp. NF 2653]
gi|306844026|ref|ZP_07476621.1| ribosomal protein S2 [Brucella inopinata BO1]
gi|340790780|ref|YP_004756245.1| 30S ribosomal protein S2 [Brucella pinnipedialis B2/94]
gi|376273110|ref|YP_005151688.1| 30S ribosomal protein S2 [Brucella abortus A13334]
gi|376276229|ref|YP_005116668.1| 30S ribosomal protein S2 [Brucella canis HSK A52141]
gi|376280834|ref|YP_005154840.1| 30S ribosomal protein S2 [Brucella suis VBI22]
gi|384211527|ref|YP_005600609.1| 30S ribosomal protein S2 [Brucella melitensis M5-90]
gi|384224828|ref|YP_005615992.1| 30S ribosomal protein S2 [Brucella suis 1330]
gi|384408633|ref|YP_005597254.1| 30S ribosomal protein2 [Brucella melitensis M28]
gi|423166739|ref|ZP_17153442.1| 30S ribosomal protein S2 [Brucella abortus bv. 1 str. NI435a]
gi|423170887|ref|ZP_17157562.1| 30S ribosomal protein S2 [Brucella abortus bv. 1 str. NI474]
gi|423173031|ref|ZP_17159702.1| 30S ribosomal protein S2 [Brucella abortus bv. 1 str. NI486]
gi|423178276|ref|ZP_17164920.1| 30S ribosomal protein S2 [Brucella abortus bv. 1 str. NI488]
gi|423180317|ref|ZP_17166958.1| 30S ribosomal protein S2 [Brucella abortus bv. 1 str. NI010]
gi|423183449|ref|ZP_17170086.1| 30S ribosomal protein S2 [Brucella abortus bv. 1 str. NI016]
gi|423185611|ref|ZP_17172225.1| 30S ribosomal protein S2 [Brucella abortus bv. 1 str. NI021]
gi|423188746|ref|ZP_17175356.1| 30S ribosomal protein S2 [Brucella abortus bv. 1 str. NI259]
gi|38258384|sp|Q8G0D6.1|RS2_BRUSU RecName: Full=30S ribosomal protein S2
gi|75505270|sp|Q57CX7.1|RS2_BRUAB RecName: Full=30S ribosomal protein S2
gi|123768485|sp|Q2YRJ1.1|RS2_BRUA2 RecName: Full=30S ribosomal protein S2
gi|189044927|sp|A9M5H4.1|RS2_BRUC2 RecName: Full=30S ribosomal protein S2
gi|189044928|sp|B0CGV9.1|RS2_BRUSI RecName: Full=30S ribosomal protein S2
gi|238689378|sp|B2S611.1|RS2_BRUA1 RecName: Full=30S ribosomal protein S2
gi|254764461|sp|C0RJD0.1|RS2_BRUMB RecName: Full=30S ribosomal protein S2
gi|23347995|gb|AAN30082.1| ribosomal protein S2 [Brucella suis 1330]
gi|62196207|gb|AAX74507.1| RpsB, ribosomal protein S2 [Brucella abortus bv. 1 str. 9-941]
gi|82616102|emb|CAJ11140.1| Ribosomal protein S2:Ribosomal protein S2, bacterial and organelle
form [Brucella melitensis biovar Abortus 2308]
gi|161335924|gb|ABX62229.1| ribosomal protein S2 [Brucella canis ATCC 23365]
gi|163674149|gb|ABY38260.1| ribosomal protein S2 [Brucella suis ATCC 23445]
gi|189019886|gb|ACD72608.1| Ribosomal protein S2 [Brucella abortus S19]
gi|225641024|gb|ACO00938.1| ribosomal protein S2 [Brucella melitensis ATCC 23457]
gi|255999749|gb|ACU48148.1| 30S ribosomal protein S2 [Brucella microti CCM 4915]
gi|260095675|gb|EEW79552.1| ribosomal protein S2 [Brucella abortus NCTC 8038]
gi|260151651|gb|EEW86745.1| ribosomal protein S2 [Brucella melitensis bv. 1 str. 16M]
gi|260155823|gb|EEW90903.1| ribosomal protein S2 [Brucella suis bv. 4 str. 40]
gi|260668438|gb|EEX55378.1| 30S ribosomal protein S2 [Brucella abortus bv. 4 str. 292]
gi|260672378|gb|EEX59199.1| 30S ribosomal protein S2 [Brucella abortus bv. 2 str. 86/8/59]
gi|260675011|gb|EEX61832.1| 30S ribosomal protein S2 [Brucella abortus bv. 6 str. 870]
gi|260873443|gb|EEX80512.1| 30S ribosomal protein S2 [Brucella abortus bv. 9 str. C68]
gi|260915762|gb|EEX82623.1| 30S ribosomal protein S2 [Brucella abortus bv. 3 str. Tulya]
gi|260920912|gb|EEX87565.1| 30S ribosomal protein S2 [Brucella ceti B1/94]
gi|260924598|gb|EEX91166.1| 30S ribosomal protein S2 [Brucella ceti M13/05/1]
gi|261294694|gb|EEX98190.1| 30S ribosomal protein S2 [Brucella ceti M644/93/1]
gi|261297018|gb|EEY00515.1| 30S ribosomal protein S2 [Brucella pinnipedialis B2/94]
gi|261301231|gb|EEY04728.1| 30S ribosomal protein S2 [Brucella neotomae 5K33]
gi|261738335|gb|EEY26331.1| ribosomal protein S2 [Brucella sp. F5/99]
gi|261742220|gb|EEY30146.1| 30S ribosomal protein S2 [Brucella suis bv. 5 str. 513]
gi|261744879|gb|EEY32805.1| 30S ribosomal protein S2 [Brucella suis bv. 3 str. 686]
gi|262552760|gb|EEZ08750.1| 30S ribosomal protein S2 [Brucella ceti M490/95/1]
gi|262766190|gb|EEZ11979.1| 30S ribosomal protein S2 [Brucella melitensis bv. 3 str. Ether]
gi|263002025|gb|EEZ14600.1| 30S ribosomal protein S2 [Brucella melitensis bv. 1 str. Rev.1]
gi|263093978|gb|EEZ17912.1| ribosomal protein S2 [Brucella melitensis bv. 2 str. 63/9]
gi|264661023|gb|EEZ31284.1| 30S ribosomal protein S2 [Brucella pinnipedialis M292/94/1]
gi|264662811|gb|EEZ33072.1| 30S ribosomal protein S2 [Brucella sp. 83/13]
gi|297175642|gb|EFH34989.1| 30S ribosomal protein S2 [Brucella abortus bv. 5 str. B3196]
gi|306275781|gb|EFM57505.1| ribosomal protein S2 [Brucella inopinata BO1]
gi|306406897|gb|EFM63118.1| ribosomal protein S2 [Brucella sp. NF 2653]
gi|326409180|gb|ADZ66245.1| Ribosomal protein S2 [Brucella melitensis M28]
gi|326538890|gb|ADZ87105.1| ribosomal protein S2 [Brucella melitensis M5-90]
gi|340559239|gb|AEK54477.1| 30S ribosomal protein S2 [Brucella pinnipedialis B2/94]
gi|343383008|gb|AEM18500.1| 30S ribosomal protein S2 [Brucella suis 1330]
gi|358258433|gb|AEU06168.1| 30S ribosomal protein S2 [Brucella suis VBI22]
gi|363400716|gb|AEW17686.1| 30S ribosomal protein S2 [Brucella abortus A13334]
gi|363404796|gb|AEW15091.1| 30S ribosomal protein S2 [Brucella canis HSK A52141]
gi|374539465|gb|EHR10969.1| 30S ribosomal protein S2 [Brucella abortus bv. 1 str. NI474]
gi|374542970|gb|EHR14454.1| 30S ribosomal protein S2 [Brucella abortus bv. 1 str. NI435a]
gi|374543586|gb|EHR15068.1| 30S ribosomal protein S2 [Brucella abortus bv. 1 str. NI486]
gi|374545515|gb|EHR16976.1| 30S ribosomal protein S2 [Brucella abortus bv. 1 str. NI488]
gi|374548881|gb|EHR20328.1| 30S ribosomal protein S2 [Brucella abortus bv. 1 str. NI010]
gi|374549512|gb|EHR20955.1| 30S ribosomal protein S2 [Brucella abortus bv. 1 str. NI016]
gi|374558404|gb|EHR29797.1| 30S ribosomal protein S2 [Brucella abortus bv. 1 str. NI259]
gi|374559702|gb|EHR31087.1| 30S ribosomal protein S2 [Brucella abortus bv. 1 str. NI021]
Length = 256
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 103/232 (44%), Gaps = 46/232 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M P+IYG R I DL Q+ LL AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S +I A ++ W GM TN
Sbjct: 68 RVLFVGTKRQASDIIADAANRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLDELLAGEA 127
Query: 167 --------------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL RA+ + PDL+ + +T + AI EA ++ IP
Sbjct: 128 QGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAI----AIQEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
V ++DSNC+P+ I YP+PGNDD AI YC + A L G +Q + +
Sbjct: 184 VVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGI 235
>gi|406990087|gb|EKE09776.1| hypothetical protein ACD_16C00110G0011 [uncultured bacterium]
Length = 318
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 104/226 (46%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ D +M PY++G R G I DL Q+ +L +L + G
Sbjct: 7 MRQLLEAGVHFGHQTRRWDPKMAPYLFGSRGGIHIIDLQQTVPMLHHSLEVIRDTVANGG 66
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR------------ 176
VLFVG Q S I++ A C +F W GM TN + + +++TR
Sbjct: 67 RVLFVGTKRQASQKIKEAASLCGQFYVNHRWLGGMLTNWKTISQSITRLRELQEKLGEGA 126
Query: 177 ------------------------------LPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
LPD++ + +T + AI EA K+ IP
Sbjct: 127 HGFTKKELLSLERERDKLELSLGGIKDMGGLPDILFVIDTNKEEI----AIKEANKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V IVDSN NP+ I Y +PGNDD AI+ +C + AIL G +A+
Sbjct: 183 VVAIVDSNSNPDNIDYLIPGNDDAQRAIELFCTLVSAAILDGLQAE 228
>gi|330814007|ref|YP_004358246.1| 30S ribosomal protein S2 [Candidatus Pelagibacter sp. IMCC9063]
gi|327487102|gb|AEA81507.1| SSU ribosomal protein S2p (SAe) [Candidatus Pelagibacter sp.
IMCC9063]
Length = 267
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 100/216 (46%), Gaps = 46/216 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +KD+ +A VHLGHK + +MKP+I+G + I DL Q+ ELL AL + A
Sbjct: 6 VTIKDLLEAGVHLGHKTFRWNPKMKPFIFGEKNSVHIIDLSQTLELLNKALLELHRCASN 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
+G +LFV Q S L+ A++ F W GM TN
Sbjct: 66 NGKILFVSTKKQASELVANVAKETNNFYVNHRWLGGMLTNWNTINKSIKRLKRIEEDLKL 125
Query: 167 ----------------SEKLFRAV------TRLPDLVILTNTLTTVLEPNPAIGEAAKMC 204
EKL R++ +LPD++ + +T L A+ EA K+
Sbjct: 126 EDTGFTKKELIKMSMEKEKLDRSLGGIANMKKLPDMIFIIDTNIESL----AVLEAKKLN 181
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQV 240
IP V +VDSN NP I +P+PGNDD +I YC +
Sbjct: 182 IPIVAVVDSNSNPEFIDFPIPGNDDARRSIDLYCDL 217
>gi|420240535|ref|ZP_14744752.1| ribosomal protein S2 [Rhizobium sp. CF080]
gi|398076189|gb|EJL67268.1| ribosomal protein S2 [Rhizobium sp. CF080]
Length = 257
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 104/223 (46%), Gaps = 38/223 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ +L AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT-- 186
VLFVG Q S LI +A+ ++ W GM TN + + ++ RL L + N+
Sbjct: 68 RVLFVGTKRQASELIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLDEILNSEQ 127
Query: 187 ---------------------------------LTTVLEPNP---AIGEAAKMCIPTVGI 210
L +++ N AI EA ++ IP V I
Sbjct: 128 SGYSKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKIAIDEAKRLGIPVVAI 187
Query: 211 VDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+DSNC+P+LI YP+PGNDD AI Y + A + G +Q
Sbjct: 188 IDSNCDPDLIDYPIPGNDDASRAIALYTDLIARAAIDGIARQQ 230
>gi|407782662|ref|ZP_11129872.1| 30S ribosomal protein S2 [Oceanibaculum indicum P24]
gi|407205320|gb|EKE75293.1| 30S ribosomal protein S2 [Oceanibaculum indicum P24]
Length = 263
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 109/222 (49%), Gaps = 38/222 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + +M P+I+GVR G I DL+Q+ +L AL + + + G
Sbjct: 8 MRQLLEAGVHFGHHTRRWNPKMAPFIFGVRNGVHIIDLEQTVPMLHRALQAIRDVTAQGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPD----LVILT 184
VLFVG Q + I + A ++ W GM TN + + ++ RL D L T
Sbjct: 68 RVLFVGTKRQAAEKIAEAAGKSGQYYVNHRWLGGMLTNWKTISHSIKRLRDLDEQLAGDT 127
Query: 185 NTLTT-------------------------------VLEPNP---AIGEAAKMCIPTVGI 210
+ LT V++ N AI EA K+ IP + I
Sbjct: 128 HGLTKKELLNLTREREKLDRALGGIREMGGLPDVLFVIDTNKESIAIQEANKLGIPVIAI 187
Query: 211 VDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
+DSNC+P+ I +P+PGNDD AI+ YC++ +++L G +A+
Sbjct: 188 LDSNCDPDGIAFPIPGNDDAMRAIELYCELVSSSVLDGLQAE 229
>gi|410623465|ref|ZP_11334278.1| small subunit ribosomal protein S2 [Glaciecola pallidula DSM 14239
= ACAM 615]
gi|410156957|dbj|GAC29652.1| small subunit ribosomal protein S2 [Glaciecola pallidula DSM 14239
= ACAM 615]
Length = 244
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 115/237 (48%), Gaps = 41/237 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +M YI+G R I +L+++ L +AL++++ ++++
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMAQYIFGARNRVHIINLEKTVPLFNEALSYLSGVSHK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G +LFVG S+ + + A+ C +F + W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASIAVREAAEKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKDLEVQSAD 123
Query: 181 ----------VILTNTLTTVLE-----------------------PNPAIGEAAKMCIPT 207
V++ T LE + A+ EA + IP
Sbjct: 124 GTFEKLTKKEVLMLQREMTKLEGSLGGIKNMGGLPDVIFVIDADHEHIAVTEARNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQE 264
VG+VD+N NP+ + Y +PGNDD A+ Y AI +G+ QD + +SEK +
Sbjct: 184 VGVVDTNSNPDGVDYVIPGNDDAIRAVNLYTNAAADAINEGR--NQDIIVAVSEKDD 238
>gi|398831765|ref|ZP_10589941.1| ribosomal protein S2 [Phyllobacterium sp. YR531]
gi|398211467|gb|EJM98085.1| ribosomal protein S2 [Phyllobacterium sp. YR531]
Length = 287
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 106/238 (44%), Gaps = 46/238 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M PYIYG R I DL Q+ LL AL V+ R G
Sbjct: 30 MRQLLEAGVHFGHQTHRWNPKMAPYIYGSRNNIHILDLAQTYPLLNTALKKVSDTVARGG 89
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S +I A ++ W GM TN
Sbjct: 90 RVLFVGTKRQASDIIADAATRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLDELLSGEA 149
Query: 167 --------------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL RA+ + PDL+ + +T + AI EA ++ IP
Sbjct: 150 QGFTKKERLNLDREREKLNRALGGIKNMGSVPDLIFIIDTNKEAI----AIQEAKRLGIP 205
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQE 264
V ++DSNC+P+ I +P+PGNDD AI YC + A L G +Q +L + QE
Sbjct: 206 VVAVIDSNCDPDQIDFPIPGNDDASRAISLYCDLVAKAALDGILRQQGSLGIDVGAQE 263
>gi|197119129|ref|YP_002139556.1| 30S ribosomal protein S2 [Geobacter bemidjiensis Bem]
gi|238690890|sp|B5EHW1.1|RS2_GEOBB RecName: Full=30S ribosomal protein S2
gi|197088489|gb|ACH39760.1| ribosomal protein S2 [Geobacter bemidjiensis Bem]
Length = 255
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 108/230 (46%), Gaps = 39/230 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K++ +A VH GH+ + +MKPYI+G R G I DL ++ L ++A +FV A
Sbjct: 4 ITMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKNAYSFVTDAAQA 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLP--DLVILT 184
VLFVG Q + + AQ C +F W GM TN + +++ RL D +I
Sbjct: 64 GETVLFVGTKKQAQDSVAEEAQRCGQFYVNDRWLGGMLTNFATVKQSIDRLKRLDAMIAD 123
Query: 185 NTLTT----------------------------------VLEPNP---AIGEAAKMCIPT 207
T+ V++P A+ EA K+ IP
Sbjct: 124 GTIEAYTKKEQLKLAKEREKLEKTLGGIKGMGKVPGVLFVVDPKNEEIAVSEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLK 257
V IVD+NC+P+ I Y +PGNDD AI+ A+L+G +A+ L+
Sbjct: 184 VAIVDTNCDPDDINYVIPGNDDAIRAIRLLTSKMADAVLEGGQARNARLQ 233
>gi|442763253|gb|JAA73785.1| Putative ribosomal protein, partial [Ixodes ricinus]
Length = 130
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 80/122 (65%), Gaps = 5/122 (4%)
Query: 41 ESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQG 100
E + +P +PL + DYF V L+ V+++F+A+ HLGHK G L++ MKPYI+G R G
Sbjct: 4 EKVEEPPKPRALSPLEHADYFGVSKLISVRELFEARAHLGHKEGLLNDLMKPYIFGSRLG 63
Query: 101 QIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWR 160
I DLDQ+ L ALNF AHIAYRDGI+LFV ++ Q S ++E+ A+ C+ R +
Sbjct: 64 HHIIDLDQTVPHLFRALNFAAHIAYRDGIILFVTRNQQTSHMVEEAAKACE-----RAEK 118
Query: 161 QG 162
QG
Sbjct: 119 QG 120
>gi|225848032|ref|YP_002728195.1| 30S ribosomal protein S2 [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644482|gb|ACN99532.1| ribosomal protein S2 [Sulfurihydrogenibium azorense Az-Fu1]
Length = 288
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 47/230 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++++ +A VH GH++ + +MKPYIY R G I DL +S L + A++F+ +
Sbjct: 5 ISMRELLEAGVHFGHQVRRWNPKMKPYIYTKRNGIHIIDLSKSVPLFKQAIDFIINEVAN 64
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVT----------- 175
+LF+G Q +IE+ AQ C + W GMFTN + + +++
Sbjct: 65 GAEILFLGTKKQAQAIIEEQAQRCGAYYVNYRWLGGMFTNFQTVRKSIAKLRKLQKMEAE 124
Query: 176 --------------------------------RLPDLVILTNTLTTVLEPNPAIGEAAKM 203
R+PD++ + +T+ L A+ EA K+
Sbjct: 125 GAFEILPKKEVMKLKKQKEKLEKYLKGIVDMNRVPDIIFVVDTVREDL----AVTEANKL 180
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+ V I D+NC+P+ I YP+PGNDD AI A+++GKK ++
Sbjct: 181 GVTVVAIADTNCDPDKIDYPIPGNDDAIKAISLITSKIADAVIEGKKMRE 230
>gi|198283284|ref|YP_002219605.1| 30S ribosomal protein S2 [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218667004|ref|YP_002425872.1| 30S ribosomal protein S2 [Acidithiobacillus ferrooxidans ATCC
23270]
gi|415977838|ref|ZP_11559026.1| 30S ribosomal protein S2 [Acidithiobacillus sp. GGI-221]
gi|198247805|gb|ACH83398.1| ribosomal protein S2 [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218519217|gb|ACK79803.1| ribosomal protein S2 [Acidithiobacillus ferrooxidans ATCC 23270]
gi|339834143|gb|EGQ61927.1| 30S ribosomal protein S2 [Acidithiobacillus sp. GGI-221]
Length = 250
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 110/229 (48%), Gaps = 39/229 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ + +A VH GH+ +M PY++G R I +L+ + +LR AL+FV I+ +
Sbjct: 5 VTMRALLEAGVHFGHQSRYWHPKMAPYLFGERNRIHIINLEHTLPMLRTALSFVEQISRK 64
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
G +LFVG Q +E+ A+ F + W G TN + + +++ RL +L +T
Sbjct: 65 HGRILFVGTKRQAREAVEQEARRSGAFFVNQRWLGGTLTNFKTIRQSIRRLDELDQMTAD 124
Query: 186 ------------TLTT--------------------------VLEPNPAIGEAAKMCIPT 207
TLT V N A+ EA K+ IP
Sbjct: 125 GTMEKLTKKEGLTLTRERDKLERSLGGIKDMNGLPDAIFVIDVGHENIAVLEARKLGIPV 184
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTL 256
+G+VDSNC+P LI +P+PGNDD AI+ Y + AIL G++ + L
Sbjct: 185 IGVVDSNCDPLLIDFPIPGNDDATRAIRLYASLVADAILDGRQGGESGL 233
>gi|254797267|ref|YP_003082109.1| 30S ribosomal protein S2 [Neorickettsia risticii str. Illinois]
gi|254590505|gb|ACT69867.1| ribosomal protein S2 [Neorickettsia risticii str. Illinois]
Length = 298
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 110/222 (49%), Gaps = 41/222 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQI-IFDLDQSAELLRDALNFVAHIAY 125
V VK++F+ HLGHK + +M YIYG + I DL ++ +LR AL ++ +A
Sbjct: 8 VTVKNLFEVGAHLGHKTRFWNPKMVSYIYGTSNAKTHIVDLQKTVPMLRTALKAISDVAA 67
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDC-QEFAHTRFWRQGMFTNSEKLFRAVTRL------- 177
G VLFVG Q +I++ A C Q + + R W GMFTN + ++V +L
Sbjct: 68 NSGRVLFVGTKMQACDIIKEEAMRCGQHYVNLR-WPSGMFTNWNTVSKSVKKLVHYEKLL 126
Query: 178 ---PDLVILTNTLTT-------------------------VLEPNP---AIGEAAKMCIP 206
D++ L+ V++P A+ EA K+ IP
Sbjct: 127 EQEGDVLSKKERLSINRKRERIEKYLGGVRKMGGLPSIIFVIDPKKEHIAVEEAWKLGIP 186
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
V +VD+NC+P+ ITY +PGNDD+ I+YYC + A+L G
Sbjct: 187 VVAVVDTNCDPSKITYSIPGNDDSLRCIEYYCGLVADAVLVG 228
>gi|209964520|ref|YP_002297435.1| 30S ribosomal protein S2 [Rhodospirillum centenum SW]
gi|238058200|sp|B6ISV1.1|RS2_RHOCS RecName: Full=30S ribosomal protein S2
gi|209957986|gb|ACI98622.1| ribosomal protein S2 [Rhodospirillum centenum SW]
Length = 261
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 106/227 (46%), Gaps = 47/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + +M PY++GVR G I DL+QS ++ A+ V + G
Sbjct: 8 MRQLLEAGVHFGHHTRRWNPKMAPYLFGVRNGVHIIDLEQSVPMMYRAMQAVRDVVAGGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG + ++A+ C ++ W GM TN
Sbjct: 68 RVLFVGTKRAAQEKVAESAKRCGQYYVNHRWLGGMLTNWKTISQSIRRLKEMDEQLAVGE 127
Query: 167 ---------------SEKLFRA------VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
EKL RA + LPDL+ + +T L AI EA K+ I
Sbjct: 128 QSGRTKKELLNMTREREKLERALGGIRDMGGLPDLLFIIDTNKESL----AIQEANKLGI 183
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
P V +VDSN +P+ +T+PVPGNDD AI YC++ A+L G +A+
Sbjct: 184 PVVAVVDSNSDPDGVTFPVPGNDDALRAIDTYCELIAGAVLDGLQAE 230
>gi|407716271|ref|YP_006837551.1| 30S ribosomal protein S2 [Cycloclasticus sp. P1]
gi|407256607|gb|AFT67048.1| 30S ribosomal protein S2 [Cycloclasticus sp. P1]
Length = 265
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 110/238 (46%), Gaps = 42/238 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +++M +A VH GH+ + +M PYI+G R I +L+++ L DALNF+ +A
Sbjct: 4 ITMREMLEAGVHFGHQTRYWNPKMAPYIFGERGKIHIINLEKTLPLFNDALNFINKLAAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
G ++FVG + + A+ C W GM TN + +++ RL +L +
Sbjct: 64 KGTIMFVGTKKAARKTVAEEAKRCSMPYVDHRWLGGMLTNFGTIKKSINRLKELETMRED 123
Query: 186 --------------------------------------TLTTVLEPNPAIGEAAKMCIPT 207
+ V A+ EAAK+ IP
Sbjct: 124 GSLNRFSKKEGLKFMRQLEKLERSVGGIKDLKGPPDAIVVMDVGYEKIAVKEAAKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEV 265
+GIVDSN PN + Y +PGNDD+ A+ YCQ F AIL+GK + +K L + +EV
Sbjct: 184 IGIVDSNNKPNDVDYVIPGNDDSIRALTLYCQSFAGAILEGKAS---VIKELVDNKEV 238
>gi|417860171|ref|ZP_12505227.1| 30S ribosomal protein S2 [Agrobacterium tumefaciens F2]
gi|338823235|gb|EGP57203.1| 30S ribosomal protein S2 [Agrobacterium tumefaciens F2]
Length = 255
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 103/227 (45%), Gaps = 46/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ +L AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S +I +A+ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKVDEILNSEA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 SGYSKKERLNLEREREKLEKALGGIRDMGGVPDLMFIIDTNKEKI----AIEEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V I+DSNC+P+ I YP+PGNDD AI YC + A + G +Q
Sbjct: 184 VVAIIDSNCDPDHIDYPIPGNDDASRAISLYCDLIARAAIDGIARQQ 230
>gi|256830143|ref|YP_003158871.1| 30S ribosomal protein S2 [Desulfomicrobium baculatum DSM 4028]
gi|256579319|gb|ACU90455.1| ribosomal protein S2 [Desulfomicrobium baculatum DSM 4028]
Length = 261
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 108/228 (47%), Gaps = 39/228 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K M + VH GH+ + +M+P+I+G R+G I DL Q+ +L R A +F+A R
Sbjct: 4 VSMKQMLETGVHFGHQTRRWNPKMRPFIFGARKGIHIIDLQQTVKLYRKAHDFIADTVAR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G ++FVG Q +I+ A+ C + T W G TN + + ++TRL L
Sbjct: 64 GGKIIFVGTKRQAQDVIKTEAERCGMYHVTNRWLGGTLTNYQTIRTSITRLKKLEGMFED 123
Query: 181 -----------VILTNTLTTV---------LEPNP-------------AIGEAAKMCIPT 207
V + +T + +E P A+ E K+ IP
Sbjct: 124 GSVSRFLKKEVVRMEREVTKLNLTLGGIKDMEEPPAAAFIIDPHREEIAVKECRKLGIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V +VD+NC+P+LI Y +PGNDD AI+ + A ++G + +D
Sbjct: 184 VAVVDTNCDPDLIDYIIPGNDDAIRAIKLFAGAMADACMEGAASTKDA 231
>gi|451941667|ref|YP_007462304.1| 30S ribosomal protein S2 [Bartonella vinsonii subsp. berkhoffii
str. Winnie]
gi|451901054|gb|AGF75516.1| 30S ribosomal protein S2 [Bartonella vinsonii subsp. berkhoffii
str. Winnie]
Length = 257
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 103/229 (44%), Gaps = 46/229 (20%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+ +A VH GH+ + +M PYIYG R I DL Q+ LL AL V+ G +L
Sbjct: 11 LLEAGVHFGHQTHRWNPKMTPYIYGQRNNIHIIDLSQTVPLLHQALKLVSDTVACGGRIL 70
Query: 132 FVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------------- 166
FVG Q S +I A ++ W GM TN
Sbjct: 71 FVGTKRQASDIIADAANRSAQYYVNARWLGGMLTNWKTISHSIHRLRKLDKILAAEAQGF 130
Query: 167 -----------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIPTVG 209
EKL RA+ + PDL+ + +T + N AI EA ++ IP +
Sbjct: 131 TKKERLNLERDREKLNRALGGIKDMGSVPDLIFVIDTN----KENIAIQEAKRLGIPVIA 186
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
I+D+NC+P+ IT+P+PGNDD AI YC +F A L G +Q + +
Sbjct: 187 IIDTNCDPDNITHPIPGNDDASRAIALYCDLFARAALDGIARQQGAMGV 235
>gi|429124711|ref|ZP_19185243.1| 30S ribosomal protein S2 [Brachyspira hampsonii 30446]
gi|445062063|ref|ZP_21374502.1| 30S ribosomal protein S2 [Brachyspira hampsonii 30599]
gi|426279484|gb|EKV56507.1| 30S ribosomal protein S2 [Brachyspira hampsonii 30446]
gi|444506555|gb|ELV06878.1| 30S ribosomal protein S2 [Brachyspira hampsonii 30599]
Length = 271
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 48/232 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+KD+ +A VH GH D RMKP+I+ R I DL ++ ++ A V +A G
Sbjct: 6 MKDLLEAGVHFGHPTRKWDPRMKPFIFQERNDIYIIDLMKTLTYVKKAHEAVKEMARNGG 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR------------ 176
VLFVG Q S I++ A+ C + W GM TN + +++ R
Sbjct: 66 NVLFVGTKKQASQSIKEAAEKCDMYYVNNRWLGGMLTNFATIKKSIARLKKIEKEEVDGT 125
Query: 177 -------------------------------LPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
LPD++ + + + + A+ EA K+ I
Sbjct: 126 FDKLPKKEVILLLKEKERLEKNFAGIKDMENLPDMLFVIDPMQEAI----AVSEARKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK-KAKQDTL 256
P V +VD+NCNP +I YP+PGNDD AI + V +A+++G+ +A ++TL
Sbjct: 182 PVVAVVDTNCNPEVIDYPIPGNDDAIRAISLFAGVVASAVIEGQNEAGKETL 233
>gi|408785389|ref|ZP_11197136.1| 30S ribosomal protein S2 [Rhizobium lupini HPC(L)]
gi|418296188|ref|ZP_12908032.1| 30S ribosomal protein S2 [Agrobacterium tumefaciens CCNWGS0286]
gi|424910233|ref|ZP_18333610.1| ribosomal protein S2 [Rhizobium leguminosarum bv. viciae USDA 2370]
gi|355539620|gb|EHH08858.1| 30S ribosomal protein S2 [Agrobacterium tumefaciens CCNWGS0286]
gi|392846264|gb|EJA98786.1| ribosomal protein S2 [Rhizobium leguminosarum bv. viciae USDA 2370]
gi|408488983|gb|EKJ97290.1| 30S ribosomal protein S2 [Rhizobium lupini HPC(L)]
Length = 255
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 103/227 (45%), Gaps = 46/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ +L AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S +I +A+ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKVDEILNSEG 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 SGYSKKERLNLEREREKLEKALGGIRDMGGVPDLMFIIDTNKEKI----AIEEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V I+DSNC+P+ I YP+PGNDD AI YC + A + G +Q
Sbjct: 184 VVAIIDSNCDPDHIDYPIPGNDDASRAISLYCDLIARAAIDGIARQQ 230
>gi|159184736|ref|NP_354381.2| 30S ribosomal protein S2 [Agrobacterium fabrum str. C58]
gi|335034977|ref|ZP_08528320.1| 30S ribosomal protein S2 [Agrobacterium sp. ATCC 31749]
gi|25009204|sp|Q8UFM3.1|RS2_AGRT5 RecName: Full=30S ribosomal protein S2
gi|159140024|gb|AAK87166.2| 30S ribosomal protein S2 [Agrobacterium fabrum str. C58]
gi|333793408|gb|EGL64762.1| 30S ribosomal protein S2 [Agrobacterium sp. ATCC 31749]
Length = 255
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 103/227 (45%), Gaps = 46/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ +L AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S +I +A+ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKVDEILNSEG 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 SGYSKKERLTLEREREKLEKALGGIRDMGGVPDLMFIIDTNKEKI----AIEEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V I+DSNC+P+ I YP+PGNDD AI YC + A + G +Q
Sbjct: 184 VVAIIDSNCDPDHIDYPIPGNDDASRAISLYCDLIARAAIDGIARQQ 230
>gi|389843131|ref|YP_006345211.1| 30S ribosomal protein S2 [Mesotoga prima MesG1.Ag.4.2]
gi|387857877|gb|AFK05968.1| ribosomal protein S2 [Mesotoga prima MesG1.Ag.4.2]
Length = 283
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 119/249 (47%), Gaps = 51/249 (20%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + +A VH GH+ + +MKPYIYG R+G I DL ++ +L+ +A +FV + A
Sbjct: 15 SVVSMKQLLEAGVHFGHRTRRWNPKMKPYIYGERKGIYIVDLQKTLKLIEEAYDFVRNSA 74
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------ 166
LFVG Q ++E+ A+ C F W G+ TN
Sbjct: 75 QEGATFLFVGTKRQAQQIVEEEAKRCDSFYVNNRWLGGLLTNFTTIKKRIEALKNFEEME 134
Query: 167 -SEKL------------------------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAA 201
S KL + + +LPD++ + + + A+ EA
Sbjct: 135 ESGKLSALPKKEQSMINKRLDKLRKNLSGVKEMQKLPDVIFIVDP----KQEEIAVAEAN 190
Query: 202 KMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK----AKQDTLK 257
K+ I +GI D+NC+P++I + +PGNDD AIQ AIL+G++ A ++ K
Sbjct: 191 KLGIKVIGIADTNCDPDVIDFIIPGNDDAIRAIQLIVHTMADAILEGREGLEAAAIESKK 250
Query: 258 LLSEKQEVQ 266
+ +E++ V+
Sbjct: 251 VTTEEEAVK 259
>gi|15639594|ref|NP_219044.1| 30S ribosomal protein S2 [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189025832|ref|YP_001933604.1| 30S ribosomal protein S2 [Treponema pallidum subsp. pallidum SS14]
gi|378973113|ref|YP_005221718.1| 30S ribosomal protein S2 [Treponema pallidum subsp. pertenue str.
SamoaD]
gi|378974180|ref|YP_005222787.1| 30S ribosomal protein S2 [Treponema pallidum subsp. pertenue str.
Gauthier]
gi|378975239|ref|YP_005223848.1| 30S ribosomal protein S2 [Treponema pallidum subsp. pallidum DAL-1]
gi|378982089|ref|YP_005230395.1| 30S ribosomal protein S2 [Treponema pallidum subsp. pertenue str.
CDC2]
gi|384422111|ref|YP_005631470.1| 30S ribosomal protein S2 [Treponema pallidum subsp. pallidum str.
Chicago]
gi|408502470|ref|YP_006869914.1| ribosomal protein S2 [Treponema pallidum subsp. pallidum str.
Mexico A]
gi|6094174|sp|O83615.1|RS2_TREPA RecName: Full=30S ribosomal protein S2
gi|238689332|sp|B2S3J6.1|RS2_TREPS RecName: Full=30S ribosomal protein S2
gi|3322900|gb|AAC65579.1| ribosomal protein S2 (rpsB) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018407|gb|ACD71025.1| ribosomal protein S2 [Treponema pallidum subsp. pallidum SS14]
gi|291059977|gb|ADD72712.1| ribosomal protein S2 [Treponema pallidum subsp. pallidum str.
Chicago]
gi|374677437|gb|AEZ57730.1| ribosomal protein S2 [Treponema pallidum subsp. pertenue str.
SamoaD]
gi|374678507|gb|AEZ58799.1| ribosomal protein S2 [Treponema pallidum subsp. pertenue str. CDC2]
gi|374679576|gb|AEZ59867.1| ribosomal protein S2 [Treponema pallidum subsp. pertenue str.
Gauthier]
gi|374680638|gb|AEZ60928.1| ribosomal protein S2 [Treponema pallidum subsp. pallidum DAL-1]
gi|408475833|gb|AFU66598.1| ribosomal protein S2 [Treponema pallidum subsp. pallidum str.
Mexico A]
Length = 291
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 109/242 (45%), Gaps = 49/242 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K++ ++ VH GH++ D RMK YI+ R G I DL ++ +R+A + V
Sbjct: 3 VVTIKNLLESGVHFGHQVRRWDPRMKKYIFAERNGIHIIDLQKTITAIREAYDMVRRTVS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR--------- 176
VLFVG Q+ I K AQ C F T W GM TN + ++++R
Sbjct: 63 SGKSVLFVGTKKQSQQTIAKEAQRCGMFYVTNRWLGGMLTNFSTIRKSLSRLKKIERMEI 122
Query: 177 ----------------------------------LPDLVILTNTLTTVLEPNPAIGEAAK 202
LP +V + +T + AI EA +
Sbjct: 123 DGTFEHLSKKEVASLRKEHAKLEKNLGGIKEMKELPGVVFIIDTRKETI----AIREARR 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+ IP V +VD+NCNP I YP+PGNDD AI + Q+ A+++ + LK++
Sbjct: 179 VGIPIVAVVDTNCNPEGIDYPIPGNDDAIRAISLFTQLIANAVMEA--GNEHGLKIIENL 236
Query: 263 QE 264
Q+
Sbjct: 237 QD 238
>gi|319408395|emb|CBI82050.1| 30S ribosomal protein S2 [Bartonella schoenbuchensis R1]
Length = 258
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 104/232 (44%), Gaps = 46/232 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M PYIYG R I DL Q+ LL AL V+ + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPKMAPYIYGQRNNIHIIDLAQTVPLLYQALKLVSDTVAQGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S +I A ++ W GM TN
Sbjct: 68 RVLFVGTKRQASDIIADAASRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLDKILTTEA 127
Query: 167 --------------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL RA+ + PDL+ + +T + N AI EA ++ +P
Sbjct: 128 QGFTKKERLNLERDREKLNRALGGIKDMGSVPDLMFIVDTN----KENIAIQEAKRLGVP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
+ IVD+NC+P+ I YP+PGNDD AI YC + A L G +Q + +
Sbjct: 184 VIAIVDTNCDPDGIDYPIPGNDDASRAISLYCDLVARAALDGIARQQGAMNI 235
>gi|338706567|ref|YP_004673335.1| 30S ribosomal protein S2 [Treponema paraluiscuniculi Cuniculi A]
gi|335344628|gb|AEH40544.1| ribosomal protein S2 [Treponema paraluiscuniculi Cuniculi A]
Length = 291
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 109/242 (45%), Gaps = 49/242 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K++ ++ VH GH++ D RMK YI+ R G I DL ++ +R+A + V
Sbjct: 3 VVTIKNLLESGVHFGHQVRRWDPRMKKYIFAERNGIHIIDLQKTITAIREAYDMVRRTVS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR--------- 176
VLFVG Q+ I K AQ C F T W GM TN + ++++R
Sbjct: 63 SGKSVLFVGTKKQSQQTIAKEAQRCGMFYVTNRWLGGMLTNFSTIRKSLSRLKKIERMEI 122
Query: 177 ----------------------------------LPDLVILTNTLTTVLEPNPAIGEAAK 202
LP +V + +T + AI EA +
Sbjct: 123 DGAFEHLSKKEVASLRKEHAKLEKNLGGIKEMKELPGVVFIIDTRKETI----AIREARR 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+ IP V +VD+NCNP I YP+PGNDD AI + Q+ A+++ + LK++
Sbjct: 179 VGIPIVAVVDTNCNPEGIDYPIPGNDDAIRAISLFTQLIANAVMEA--GNEHGLKIIENL 236
Query: 263 QE 264
Q+
Sbjct: 237 QD 238
>gi|333894186|ref|YP_004468061.1| 30S ribosomal protein S2 [Alteromonas sp. SN2]
gi|332994204|gb|AEF04259.1| ribosomal protein S2 [Alteromonas sp. SN2]
Length = 243
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKPYI+G R I +L+++ L +ALN+++ +A +
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPYIFGARNKVHIINLEKTVPLFNNALNYLSSVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G +LFVG ++ A C +F + W GM TN + + +++ RL +L
Sbjct: 64 KGKILFVGTKRAAGDAVKDAAVKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKELEQKSQD 123
Query: 181 ------------------VILTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFEKLTKKEALMLQREMEKLENSLGGIKDMGGLPDAIFVVDADHEHIAITEARNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
VG+VD+N NP+ + Y +PGNDD A+Q Y A++ G+++
Sbjct: 184 VGVVDTNSNPDGVDYIIPGNDDAIRAVQLYLDAAANAVISGRES 227
>gi|315924465|ref|ZP_07920687.1| 30S ribosomal protein S2 [Pseudoramibacter alactolyticus ATCC
23263]
gi|315622344|gb|EFV02303.1| 30S ribosomal protein S2 [Pseudoramibacter alactolyticus ATCC
23263]
Length = 265
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 107/229 (46%), Gaps = 43/229 (18%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +MKPYI+ R G I DL Q+ +++ DA NFV +A
Sbjct: 20 IVTMKQLLEAGVHFGHQTRRWNPKMKPYIFTERNGIYIIDLQQTVKMIGDAYNFVRDLAA 79
Query: 126 RDGIVLFVG--QSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVIL 183
+LFVG + AQNS IE A+ F W G TN E + + + RL DL +
Sbjct: 80 EGKDILFVGTKKQAQNS--IENEAKRSGSFYVNHRWLGGTLTNWETINKRINRLKDLKRM 137
Query: 184 TNTLTTVLEPNP---------------------------------------AIGEAAKMC 204
T L P AI EA K+
Sbjct: 138 EEDGTFDLLPKKEVIGLRREREKLEKFLGGIEDMHGMPGAMVIIDCKKERIAIQEAHKLG 197
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
IP + IVD+NC+P+ + Y +PGNDD A+ +V A+L+GK+ +Q
Sbjct: 198 IPIISIVDTNCDPDDVDYIIPGNDDAIRAVALILRVLADAVLEGKQGEQ 246
>gi|255003257|ref|ZP_05278221.1| 30S ribosomal protein S2 [Anaplasma marginale str. Puerto Rico]
gi|255004385|ref|ZP_05279186.1| 30S ribosomal protein S2 [Anaplasma marginale str. Virginia]
Length = 328
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 40/219 (18%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQII--FDLDQSAELLRDALNFVAHIAYR 126
++D+ +A VHLGHK G + M PYIYGV + + I DL ++ LLRDAL+ + + +
Sbjct: 10 IRDLVEAGVHLGHKAGRWNPAMAPYIYGVHKYKDIHVIDLRKTLVLLRDALSVLYDVVLK 69
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
G VLFVG Q S ++ + A C ++ W GM TN E + ++ RL + L N
Sbjct: 70 RGRVLFVGTKVQASNIVAEEATRCGQYYVNHRWLGGMLTNWETVSSSIRRLVEFERLINN 129
Query: 186 ----------------------TLTTVLEPNP---------------AIGEAAKMCIPTV 208
+L + E AI EA K+ IP V
Sbjct: 130 NEGQFTKKELLMLDKQRGKLERSLGGIREMGGLPHALFVIDTNKEHIAIREANKLKIPVV 189
Query: 209 GIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILK 247
I+D+N +P + YP+PGNDD+ +I ++C+ IL+
Sbjct: 190 AILDTNSDPGGVDYPIPGNDDSVRSIDFFCRAVSRTILE 228
>gi|11466554|ref|NP_044803.1| ribosomal protein S2 (mitochondrion) [Reclinomonas americana]
gi|2258384|gb|AAD11918.1| ribosomal protein S2 (mitochondrion) [Reclinomonas americana]
Length = 212
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 99/197 (50%), Gaps = 24/197 (12%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
M VH+GH + + PY+ G R I DL+++ LLR L+FV+ ++ R G +L
Sbjct: 14 MLRNGVHIGHHVNKWNSETGPYLLGQRGNIHIIDLEKTLFLLRKTLSFVSELSSRGGSIL 73
Query: 132 FVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN--------------SEKLF------ 171
F+ S ++E+ A+ C + R W G+ TN SEK
Sbjct: 74 FISTMYDFSNIVEENAKKCGQPYVNRRWIGGLLTNFTHIKKKLRNPKGCSEKFIFSTQGI 133
Query: 172 RAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTP 231
R + RLP + + V A+ EA+K+ IPT+ IVDSN + ITYP+PGNDD+
Sbjct: 134 RNMERLPSAIFIVG----VNNCRTALLEASKLNIPTIAIVDSNTSIQDITYPIPGNDDSI 189
Query: 232 SAIQYYCQVFKTAILKG 248
A+ YCQ+ AIL G
Sbjct: 190 LAVNLYCQLISNAILSG 206
>gi|161544987|ref|YP_153979.2| 30S ribosomal protein S2 [Anaplasma marginale str. St. Maries]
gi|209573722|sp|Q5PAF6.2|RS2_ANAMM RecName: Full=30S ribosomal protein S2
Length = 327
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 40/219 (18%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQII--FDLDQSAELLRDALNFVAHIAYR 126
++D+ +A VHLGHK G + M PYIYGV + + I DL ++ LLRDAL+ + + +
Sbjct: 9 IRDLVEAGVHLGHKAGRWNPAMAPYIYGVHKYKDIHVIDLRKTLVLLRDALSVLYDVVLK 68
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
G VLFVG Q S ++ + A C ++ W GM TN E + ++ RL + L N
Sbjct: 69 RGRVLFVGTKVQASNIVAEEATRCGQYYVNHRWLGGMLTNWETVSSSIRRLVEFERLINN 128
Query: 186 ----------------------TLTTVLEPNP---------------AIGEAAKMCIPTV 208
+L + E AI EA K+ IP V
Sbjct: 129 NEGQFTKKELLMLDKQRGKLERSLGGIREMGGLPHALFVIDTNKEHIAIREANKLKIPVV 188
Query: 209 GIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILK 247
I+D+N +P + YP+PGNDD+ +I ++C+ IL+
Sbjct: 189 AILDTNSDPGGVDYPIPGNDDSVRSIDFFCRAVSRTILE 227
>gi|383316036|ref|YP_005376878.1| 30S ribosomal protein S2 [Frateuria aurantia DSM 6220]
gi|379043140|gb|AFC85196.1| ribosomal protein S2 [Frateuria aurantia DSM 6220]
Length = 283
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 109/229 (47%), Gaps = 49/229 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+++ L DALNF++ +A +
Sbjct: 4 VTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTLPLFTDALNFLSGVAQK 63
Query: 127 DGIVLFVG-QSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
G +LFVG + + L E+ A+ F R W GM TN
Sbjct: 64 RGTILFVGTKRSAREPLAEEAARAGMPFVTAR-WLGGMLTNFRTVKQSVARLKELEAAET 122
Query: 167 ------------------SEKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL + +TRLPD + + + + + A+ EA K
Sbjct: 123 DGSFDKLVKHEVLTRRREREKLENSLGGIKNMTRLPDALFIVD----IGHEDIAVQEAKK 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+ IP V +VD+N NP L+ Y +PGNDD AIQ Y + AIL+GK A
Sbjct: 179 LGIPVVAVVDTNYNPELVDYAIPGNDDAIRAIQLYARAAADAILEGKAA 227
>gi|325292737|ref|YP_004278601.1| 30S ribosomal protein S2 [Agrobacterium sp. H13-3]
gi|418406893|ref|ZP_12980212.1| 30S ribosomal protein S2 [Agrobacterium tumefaciens 5A]
gi|325060590|gb|ADY64281.1| 30S ribosomal protein S2 [Agrobacterium sp. H13-3]
gi|358007386|gb|EHJ99709.1| 30S ribosomal protein S2 [Agrobacterium tumefaciens 5A]
Length = 255
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 101/222 (45%), Gaps = 46/222 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ +L AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S +I +A+ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKVDEILNSEG 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 TGYSKKERLTLEREREKLEKALGGIRDMGGVPDLMFIIDTNKEKI----AIEEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
V I+DSNC+P+ I YP+PGNDD AI YC + A + G
Sbjct: 184 VVAIIDSNCDPDHIDYPIPGNDDASRAISLYCDLIARAAIDG 225
>gi|333979943|ref|YP_004517888.1| 30S ribosomal protein S2 [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823424|gb|AEG16087.1| ribosomal protein S2 [Desulfotomaculum kuznetsovii DSM 6115]
Length = 235
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 39/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M PYI+ R G I DL ++ + +A NFV ++A
Sbjct: 3 IISMKQLLEAGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTVRKIEEAYNFVRNLAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G +LFVG Q +++ A+ C F + W GM TN + + R + RL +L + +
Sbjct: 63 EGGTILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGMLTNFQTIRRRIERLHELERMED 122
Query: 186 TLTTVLEPNP---------------------------------------AIGEAAKMCIP 206
T + P A+ EA K+ IP
Sbjct: 123 DGTLAVLPKKEVAELIHEKERLQKFLGGIKNMRKLPDALFVIDPRKERIAVAEARKLKIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V IVD+NC+P+ I Y +PGNDD A++ A+L+G++ +Q
Sbjct: 183 IVAIVDTNCDPDEIDYVIPGNDDAIRAVRLLTSKIADAVLEGRQGEQ 229
>gi|56388137|gb|AAV86724.1| 30S ribosomal protein S2 [Anaplasma marginale str. St. Maries]
Length = 365
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 108/223 (48%), Gaps = 40/223 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQII--FDLDQSAELLRDALNFVAHIAYR 126
++D+ +A VHLGHK G + M PYIYGV + + I DL ++ LLRDAL+ + + +
Sbjct: 47 IRDLVEAGVHLGHKAGRWNPAMAPYIYGVHKYKDIHVIDLRKTLVLLRDALSVLYDVVLK 106
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
G VLFVG Q S ++ + A C ++ W GM TN E + ++ RL + L N
Sbjct: 107 RGRVLFVGTKVQASNIVAEEATRCGQYYVNHRWLGGMLTNWETVSSSIRRLVEFERLINN 166
Query: 186 ----------------------TLTTVLEPNP---------------AIGEAAKMCIPTV 208
+L + E AI EA K+ IP V
Sbjct: 167 NEGQFTKKELLMLDKQRGKLERSLGGIREMGGLPHALFVIDTNKEHIAIREANKLKIPVV 226
Query: 209 GIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
I+D+N +P + YP+PGNDD+ +I ++C+ IL+ ++
Sbjct: 227 AILDTNSDPGGVDYPIPGNDDSVRSIDFFCRAVSRTILEAIRS 269
>gi|222475272|ref|YP_002563688.1| 30S ribosomal protein S2 [Anaplasma marginale str. Florida]
gi|222419409|gb|ACM49432.1| 30S ribosomal protein S2 (rpsB) [Anaplasma marginale str. Florida]
Length = 365
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 108/223 (48%), Gaps = 40/223 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQII--FDLDQSAELLRDALNFVAHIAYR 126
++D+ +A VHLGHK G + M PYIYGV + + I DL ++ LLRDAL+ + + +
Sbjct: 47 IRDLVEAGVHLGHKAGRWNPAMAPYIYGVHKYKDIHVIDLRKTLVLLRDALSVLYDVVLK 106
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
G VLFVG Q S ++ + A C ++ W GM TN E + ++ RL + L N
Sbjct: 107 RGRVLFVGTKVQASNIVAEEATRCGQYYVNHRWLGGMLTNWETVSSSIRRLVEFERLINN 166
Query: 186 ----------------------TLTTVLEPNP---------------AIGEAAKMCIPTV 208
+L + E AI EA K+ IP V
Sbjct: 167 NEGQFTKKELLMLDKQRGKLERSLGGIREMGGLPHALFVIDTNKEHIAIREANKLKIPVV 226
Query: 209 GIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
I+D+N +P + YP+PGNDD+ +I ++C+ IL+ ++
Sbjct: 227 AILDTNSDPGGVDYPIPGNDDSVRSIDFFCRAVSRTILEAIRS 269
>gi|17982767|gb|AAL52004.1| ssu ribosomal protein s2p [Brucella melitensis bv. 1 str. 16M]
Length = 266
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 109/253 (43%), Gaps = 53/253 (20%)
Query: 48 EPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLD 107
+PE N + D+ ++ + +A VH GH+ + +M P+IYG R I DL
Sbjct: 4 KPEKENKMALPDF-------SMRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLS 56
Query: 108 QSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN- 166
Q+ LL AL V+ R G VL+VG Q S +I ++ W GM TN
Sbjct: 57 QTVPLLNSALKVVSDTVARGGRVLYVGTKRQASDIIADAGNRSAQYYVNARWLGGMMTNW 116
Query: 167 -----------------------------------SEKLFRAVTRL------PDLVILTN 185
EKL RA+ + PDL+ + +
Sbjct: 117 KTISNSIQRLRKLDELLAGEAQGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIID 176
Query: 186 TLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAI 245
T + AI EA ++ IP V ++DSNC+P+ I YP+PGNDD AI YC + A
Sbjct: 177 TNKEAI----AIQEAKRLGIPVVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAA 232
Query: 246 LKGKKAKQDTLKL 258
L G +Q + +
Sbjct: 233 LDGIARQQGAMGI 245
>gi|410636558|ref|ZP_11347151.1| small subunit ribosomal protein S2 [Glaciecola lipolytica E3]
gi|410143840|dbj|GAC14356.1| small subunit ribosomal protein S2 [Glaciecola lipolytica E3]
Length = 243
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 39/223 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ L +ALN+++ ++ +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEKTVPLFNEALNYISGVSAK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG S +++ AQ C +F + W GM TN + + +++ RL +L
Sbjct: 64 KGKVLFVGTKRAASDAVKEAAQKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKELEQQSQD 123
Query: 181 ----------VILTNTLTTVLEPN-----------------------PAIGEAAKMCIPT 207
V++ T LE + AI EA + IP
Sbjct: 124 GTFDKLTKKEVLMLQREMTKLESSLGGIKDMGGLPDCLFVIDADHEHIAITEARNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
+ +VD+N NP+ + Y +PGNDD A+Q Y A+ +G++
Sbjct: 184 ISVVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAADAVSQGRE 226
>gi|419759846|ref|ZP_14286131.1| 30S ribosomal protein S2 [Thermosipho africanus H17ap60334]
gi|407514885|gb|EKF49671.1| 30S ribosomal protein S2 [Thermosipho africanus H17ap60334]
Length = 259
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 108/229 (47%), Gaps = 47/229 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +MK YI+G R+G I DL ++++LL +A NFV A
Sbjct: 3 VLTMKQLLEAGVHFGHRTQRWNPKMKEYIFGARKGIYIIDLQKTSKLLDEAYNFVRDKAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKL--------------- 170
G +LFVG Q +I++ A+ C F W G+ TN E +
Sbjct: 63 EGGTILFVGTKKQAQQVIKQEAERCGAFYVNHRWLGGLLTNFETIRKRIDKLIELEEMEA 122
Query: 171 ----------------------------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
+ +TRLPD++ + + E N A+ EA
Sbjct: 123 NGEFDHLPKKEQSRLRRILEKLRKNLGGLKNMTRLPDVIYIVDPRK---ERN-AVFEANL 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+ IPTV IVD+NC+P+ I Y +PGNDD AIQ A L+G++
Sbjct: 179 LKIPTVAIVDTNCDPDEIDYIIPGNDDAIRAIQLITSKIADAYLEGREG 227
>gi|94263229|ref|ZP_01287046.1| Ribosomal protein S2 [delta proteobacterium MLMS-1]
gi|93456447|gb|EAT06567.1| Ribosomal protein S2 [delta proteobacterium MLMS-1]
Length = 270
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +++M +A +H GH+ + +MKPYI+G R G I +LD++ L + A +VA A +
Sbjct: 9 ISMREMLEAGLHFGHQTRRWNPKMKPYIFGARNGIYIINLDKTLPLFQRATEYVARKAAK 68
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPD------- 179
G +LFVG Q ++ + A+ C + W GM TN + + ++V RL
Sbjct: 69 GGSILFVGTKRQAQDIVREEAERCGMYFVNHRWLGGMLTNHQTIKKSVDRLKSYTSMQED 128
Query: 180 -----------LVILTNTLTT------------------VLEP---NPAIGEAAKMCIPT 207
++I TL V++P + A+ EA ++ +P
Sbjct: 129 GSIHRYKKKEIMMIQKETLKLERNLGGIKEMKSLPAAIFVVDPKREDIAVTEANRLGVPV 188
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V I D+NC+P I Y +PGNDD +I+ C AIL GK++
Sbjct: 189 VAIADTNCDPTGIDYLIPGNDDAIKSIRLVCSKLADAILAGKES 232
>gi|296127747|ref|YP_003634999.1| 30S ribosomal protein S2 [Brachyspira murdochii DSM 12563]
gi|296019563|gb|ADG72800.1| ribosomal protein S2 [Brachyspira murdochii DSM 12563]
Length = 271
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 48/241 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+KD+ +A VH GH D RMKP+I+ R I DL ++ ++ A + V +A G
Sbjct: 6 MKDLLEAGVHFGHPTRKWDPRMKPFIFQERNDIYIIDLMKTLTYVKKAYDAVKEMARNGG 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR------------ 176
VLFVG Q S I++ A+ C + W GM TN + +++ R
Sbjct: 66 NVLFVGTKKQASQSIKEAAEKCDMYYVNNRWLGGMLTNFATIKKSIARLKRIEKEEVDGT 125
Query: 177 -------------------------------LPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
LPD++ + + + + A+ EA K+ I
Sbjct: 126 FDKLPKKEVILLLKEKERLEKNFAGIKDMENLPDMLFVIDPMQEAI----AVSEARKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK-KAKQDTLKLLSEKQE 264
P V +VD+NCNP +I +P+PGNDD AI + V +A+++G+ +A ++TL E
Sbjct: 182 PVVAVVDTNCNPEVIDHPIPGNDDAIRAISLFAGVVASAVIEGQNEAGKETLAKHDSSSE 241
Query: 265 V 265
V
Sbjct: 242 V 242
>gi|433775275|ref|YP_007305742.1| ribosomal protein S2 [Mesorhizobium australicum WSM2073]
gi|433667290|gb|AGB46366.1| ribosomal protein S2 [Mesorhizobium australicum WSM2073]
Length = 260
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 103/232 (44%), Gaps = 46/232 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A +H GH+ + +M YIYG R I DL Q+ LL AL V+ + G
Sbjct: 8 MRQLLEAGIHFGHQTHRWNPKMASYIYGARNNIHIIDLSQTVPLLHQALKQVSDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S ++ AQ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASDIVADAAQRSAQYYVNSRWLGGMLTNWKTISNSIQRLRKLDEMLAGEA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 QGLTKKERLNLDREREKLDKALGGIKDMGSTPDLMFVIDTNKEAI----AILEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
V I+DSNC+P+ I +P+PGNDD AIQ YC + A + G +Q L +
Sbjct: 184 VVAIIDSNCDPDKIDFPIPGNDDAARAIQLYCDLIAKAAIDGIARQQGALGM 235
>gi|402896134|ref|XP_003911162.1| PREDICTED: 28S ribosomal protein S2, mitochondrial [Papio anubis]
Length = 229
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 69/91 (75%)
Query: 163 MFTNSEKLFRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITY 222
+ TN+ LF RLPDL+I +TL T+ EP+ A+ +AAKM IPTVGIVD+NCNP LITY
Sbjct: 108 LLTNAPLLFGPTVRLPDLIIFLHTLNTIFEPHVAVRDAAKMNIPTVGIVDTNCNPCLITY 167
Query: 223 PVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P+PGNDD+P A+ YC++F+T I + K+ ++
Sbjct: 168 PIPGNDDSPPAVHLYCRLFQTTITRAKEKRR 198
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIG 84
PL++ D+F V+ L V+ +FDA+VHLGHK G
Sbjct: 66 PLKHSDFFNVKELFSVRSLFDARVHLGHKAG 96
>gi|380513316|ref|ZP_09856723.1| 30S ribosomal protein S2 [Xanthomonas sacchari NCPPB 4393]
Length = 265
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 113/235 (48%), Gaps = 39/235 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+++ L DA+NF++ +A +
Sbjct: 4 VTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFISSVAQK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LF+G +++ A+ C + T+ W G TN + ++V RL +L
Sbjct: 64 RGTILFLGTKRSARDAVKEEAERCGQPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L +L + E P+ AI EA K+ IP
Sbjct: 124 GTFDKLVKHEVLTLRRERDKLEASLGGIKEMTRLPDALFVIDIGHEDIAIKEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+ +VD+N NP+L+ Y +PGNDD A+Q Y + A+L+GK A + + E+
Sbjct: 184 IAVVDTNYNPDLVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNAASVREEE 238
>gi|4469299|emb|CAB38449.1| 30S ribosomal protein S2 [Prototheca wickerhamii]
Length = 257
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 114/247 (46%), Gaps = 47/247 (19%)
Query: 63 VRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAH 122
++ ++K++DM + +H GH + RM+P+IYG R G+ I DL Q+ LL + L F+
Sbjct: 5 IKKIIKLEDMVQSGMHFGHFTSEWNPRMQPFIYGKRHGRHILDLVQTYYLLNNLLAFLEK 64
Query: 123 IAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKL---------FRA 173
A + LFVG Q + LI KTA C + + W GM TN + + FR
Sbjct: 65 SAMQGKKFLFVGTKKQIAPLIAKTAISCNSYYVNQRWLGGMLTNWKTIQNSLYQLQEFRK 124
Query: 174 VTR----------------------------------LPDLVILTNTLTTVLEPNPAIGE 199
+ LPD+VI+ E A+ E
Sbjct: 125 AEQLGEWNLLKKKEIAQKKRQKLRLDKNLSGLENMKSLPDIVIIIGQ----AEELNAVKE 180
Query: 200 AAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLL 259
++ I TV ++DSNC+P L + +P NDD+ +A+QY FK AI+ G+K L+
Sbjct: 181 CRQLGITTVTLLDSNCDPFLADWYIPANDDSVAAVQYLLSNFKEAIISGQKTNNANQSLV 240
Query: 260 SEKQEVQ 266
+ K ++
Sbjct: 241 NAKSNIK 247
>gi|163760883|ref|ZP_02167962.1| putative 30S ribosomal protein S2 [Hoeflea phototrophica DFL-43]
gi|162281927|gb|EDQ32219.1| putative 30S ribosomal protein S2 [Hoeflea phototrophica DFL-43]
Length = 262
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 103/224 (45%), Gaps = 40/224 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKP+I+G R I DL Q+ +L AL V+ + G
Sbjct: 1 MRQLLEAGVHFGHQTHRWNPKMKPFIFGARNNLHILDLGQTVPMLNQALKLVSDTVSKGG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S ++ A ++ W GM TN
Sbjct: 61 RVLFVGTKRQASEIVADAASRSAQYYVNARWLGGMLTNWKTISHSIQRLRKLDEILQAEA 120
Query: 167 --------------SEKLFRAVTRLPDLVILTNTLTTVLEPNP---AIGEAAKMCIPTVG 209
EKL RA+ + D+ T L V++ N AI EA ++ IP V
Sbjct: 121 SGFTKKERLNLEREREKLDRALGGIRDMG-GTPDLMFVIDTNKEGIAIQEAKRLGIPVVA 179
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
I+DSNC+P+++ YP+PGNDD AI YC + A + G +Q
Sbjct: 180 IIDSNCDPDVVDYPIPGNDDASRAISLYCDLISRACIDGIARQQ 223
>gi|418938720|ref|ZP_13492194.1| ribosomal protein S2 [Rhizobium sp. PDO1-076]
gi|375054576|gb|EHS50926.1| ribosomal protein S2 [Rhizobium sp. PDO1-076]
Length = 255
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 103/227 (45%), Gaps = 46/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A +H GH+ + +MKPYI+G R I DL Q+ +L AL V+ R G
Sbjct: 8 MRQLLEAGIHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S +I +A+ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIARLRKLDEILASDA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T + AI EA ++ IP
Sbjct: 128 SGYSKKERLNLEREREKLDKALGGIKDMGGTPDLMFIIDTNKEKI----AIDEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V ++DSNC+P+LI Y +PGNDD AI YC + A + G +Q
Sbjct: 184 VVAVIDSNCDPDLIDYAIPGNDDASRAIALYCDLIARAAIDGIARQQ 230
>gi|340779614|ref|ZP_08699557.1| 30S ribosomal protein S2 [Acetobacter aceti NBRC 14818]
Length = 266
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 102/226 (45%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + RM PY++GVR I DL Q+ LL AL + G
Sbjct: 8 LRQLLEAGVHFGHHTRRWNPRMAPYLFGVRNQVHIIDLQQTVVLLDRALKVIRDTVASGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG S + + AQ C ++ W GM TN
Sbjct: 68 RVLFVGTKRAASDQVAEAAQRCGQYYVNHRWLGGMLTNWKTITGSIKRLRQIEDMLGGET 127
Query: 167 --------------SEKLFRAVTR------LPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL R++ LPD++ + +T L AI EA K+ IP
Sbjct: 128 QGLTKKEILDITRDKEKLERSLGGIKEMGGLPDILFVIDTTKEKL----AIEEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V ++DSN NP +TYP+PGNDD AI+ YC + +A+L G A+
Sbjct: 184 VVAVLDSNSNPEGVTYPIPGNDDAIRAIELYCNLVSSAVLDGISAE 229
>gi|442608812|ref|ZP_21023554.1| SSU ribosomal protein S2p (SAe) [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
gi|441749861|emb|CCQ09616.1| SSU ribosomal protein S2p (SAe) [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
Length = 242
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 108/224 (48%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + DAL F++++A
Sbjct: 4 VSMRDMLQAGVHFGHQARYWNPKMKPFIFGARNRVHIINLEKTVPMFNDALKFLSNVASN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
G +LFVG S +++ A C +F W GM TN + + +++ RL DL I +
Sbjct: 64 KGKILFVGTKRAASEAVKEAATGCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 186 ------------TLTTVLE---------------PNP-----------AIGEAAKMCIPT 207
LT +E P+ AI EA + IP
Sbjct: 124 GTFEKLTKKEALMLTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIREANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V IVD+N NP+ + + VPGNDD AIQ Y A+ +G+++
Sbjct: 184 VSIVDTNSNPDGVDFVVPGNDDAIRAIQLYTGAVAQAVTEGRES 227
>gi|373449946|ref|ZP_09542034.1| 30S ribosomal protein S2 [Wolbachia pipientis wAlbB]
gi|371932851|emb|CCE77021.1| 30S ribosomal protein S2 [Wolbachia pipientis wAlbB]
Length = 271
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 122/247 (49%), Gaps = 53/247 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGV-RQGQI-IFDLDQSAELLRDALNFVAHIA 124
V ++D+ ++ VH GHK+ + +M PYIYG+ +Q I I DL ++ LL A+ + +A
Sbjct: 7 VTIRDLAESGVHFGHKVSRWNAKMAPYIYGIHQQNHIHIIDLRKTLPLLEAAMKALYDVA 66
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS-------------EKL- 170
+DG +LFVG Q ++ A C ++ W GM TN EK+
Sbjct: 67 SQDGRILFVGTKFQALDIVASEAVRCGQYYVNDRWLGGMLTNWNTVSSSIKTLIQYEKIS 126
Query: 171 ----------------------------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
R + +PD++ + +T + + A+ EA K
Sbjct: 127 NDEDSILTKKELGDIEKKRKKLDKELGGIREMGAVPDILFIIDT----NKEHIAVKEAKK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG-----KKAKQDTLK 257
+ IP VG++D+N +P+ ITYP+PGNDD+ +I+ YC++ +IL G +++ +
Sbjct: 183 LGIPVVGVLDTNSDPDGITYPIPGNDDSRKSIELYCKLVADSILAGIESSLTRSRVKDHE 242
Query: 258 LLSEKQE 264
L+ EK+E
Sbjct: 243 LIQEKEE 249
>gi|110633734|ref|YP_673942.1| 30S ribosomal protein S2 [Chelativorans sp. BNC1]
gi|123057988|sp|Q11IJ8.1|RS2_MESSB RecName: Full=30S ribosomal protein S2
gi|110284718|gb|ABG62777.1| SSU ribosomal protein S2P [Chelativorans sp. BNC1]
Length = 267
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 46/232 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M PYI+G R I DL Q+ LL AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMTPYIFGERNNIHIIDLSQTVPLLHQALKVVSDTVGRGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
+LFVG Q S ++ A+ ++ W GM TN + + ++ RL
Sbjct: 68 RLLFVGTKRQASDIVADAARRSAQYYVNSRWLGGMLTNWKTISNSIQRLRRLDEMLSSEN 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PD++ + +T + A+ EA ++ IP
Sbjct: 128 LGLTKKERLNLERERDKLERALGGIRDMGSTPDMMFVIDTNKEAI----AVQEARRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
+ ++DSNC+P+++ YP+PGNDD AI YC + A + G + +Q +L +
Sbjct: 184 VIAVIDSNCDPDVVDYPIPGNDDAARAIALYCDLIAKAAIDGIERQQGSLGV 235
>gi|332307505|ref|YP_004435356.1| 30S ribosomal protein S2 [Glaciecola sp. 4H-3-7+YE-5]
gi|410642038|ref|ZP_11352556.1| small subunit ribosomal protein S2 [Glaciecola chathamensis S18K6]
gi|410647250|ref|ZP_11357685.1| small subunit ribosomal protein S2 [Glaciecola agarilytica NO2]
gi|332174834|gb|AEE24088.1| ribosomal protein S2 [Glaciecola sp. 4H-3-7+YE-5]
gi|410133105|dbj|GAC06084.1| small subunit ribosomal protein S2 [Glaciecola agarilytica NO2]
gi|410138355|dbj|GAC10743.1| small subunit ribosomal protein S2 [Glaciecola chathamensis S18K6]
Length = 243
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 39/223 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ L +ALN+++ +A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNNALNYISSVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G +LFVG S + + A C +F + W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASDSVREAAIKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKDLEQQSQD 123
Query: 181 ------------------VILTNTLTTVLE---------------PNPAIGEAAKMCIPT 207
L N+L + + AI EA + IP
Sbjct: 124 GTFDKITKKEVLMLQREMAKLENSLGGIKNMGGLPDCLFVVDADHEHIAITEARNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
V IVD+N NP+ + Y +PGNDD A+Q Y A+++G++
Sbjct: 184 VSIVDTNSNPDGVDYIIPGNDDAIRAVQLYLNSAADAVIEGRE 226
>gi|84501132|ref|ZP_00999367.1| 30S ribosomal protein S2 [Oceanicola batsensis HTCC2597]
gi|84391199|gb|EAQ03617.1| 30S ribosomal protein S2 [Oceanicola batsensis HTCC2597]
Length = 255
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 101/222 (45%), Gaps = 38/222 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM +IYG R G I DL Q+ +L ALN + ++G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMGEFIYGARNGIHIVDLTQTVPMLDQALNVIRETVAKNG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S I + A+ C ++ W G TN + + +++ RL
Sbjct: 68 RVLFVGTKRQASAPIAEAAEKCAQYYMNHRWLGGTLTNWKTVSQSINRLNEIDEKLSAGA 127
Query: 178 ------------PDLVILTNTLTTVLEPNP---------------AIGEAAKMCIPTVGI 210
D LT +L + E A+ EA K+ IP V +
Sbjct: 128 EGLTKKERLGMERDQEKLTASLGGIREMGGVPDLLFVIDVKKEQLAVAEANKLGIPVVAV 187
Query: 211 VDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
VD+NC+P+ I Y +PGNDD AI YC + A L G A+
Sbjct: 188 VDTNCSPDGIDYIIPGNDDAARAISLYCDLASRAALDGMTAQ 229
>gi|114704876|ref|ZP_01437784.1| 30S ribosomal protein S2 [Fulvimarina pelagi HTCC2506]
gi|114539661|gb|EAU42781.1| 30S ribosomal protein S2 [Fulvimarina pelagi HTCC2506]
Length = 284
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 100/227 (44%), Gaps = 46/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M PYI+G R I DL Q+ LL AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMSPYIFGARNNIHILDLAQTVPLLHRALQAVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S +I AQ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASDIIADAAQRSAQYYVNARWLGGMMTNWKTISHSIQRLRKLDELLSGEA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PD++ + +T + AI EA ++ IP
Sbjct: 128 QGFTKKERLTLTRERDKLETALGGIRDMGGVPDMMFIIDTNKESI----AIDEARRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V +VDSNC+P + YP+PGNDD AI YC + A + G +Q
Sbjct: 184 VVAVVDSNCDPARVDYPIPGNDDASRAIALYCDLIARAAVDGIARQQ 230
>gi|406922451|gb|EKD59939.1| hypothetical protein ACD_54C01036G0001 [uncultured bacterium]
Length = 252
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 102/226 (45%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M PYIYG R G I DL Q+ +L AL V + G
Sbjct: 8 MRQLLEAGVHYGHQTARWNPKMGPYIYGDRNGIHILDLTQTVPMLDAALKLVRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
+LFVG Q I + A+ C +F W G TN + + +++ RL
Sbjct: 68 RILFVGTKRQAQKPIAEAAERCAQFYMNHRWLGGTLTNWKTVSQSIQRLKQIDELLGAGG 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + V + N AI EA K+ IP
Sbjct: 128 EGLTKKERLMMERDQSKLQASLGGIREMGGTPDLIFVID----VGKENLAILEAQKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
VG+VD+N +P + Y +PGNDD AIQ YC++ A L G A+
Sbjct: 184 VVGVVDTNNSPKGVDYVIPGNDDAARAIQLYCELIAKAALDGMSAQ 229
>gi|49474296|ref|YP_032338.1| 30S ribosomal protein S2 [Bartonella quintana str. Toulouse]
gi|403530577|ref|YP_006665106.1| 30S ribosomal protein S2 [Bartonella quintana RM-11]
gi|61215535|sp|Q6FZN0.1|RS2_BARQU RecName: Full=30S ribosomal protein S2
gi|49239800|emb|CAF26190.1| 30s ribosomal protein s2 [Bartonella quintana str. Toulouse]
gi|403232648|gb|AFR26391.1| 30S ribosomal protein S2 [Bartonella quintana RM-11]
Length = 257
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 102/229 (44%), Gaps = 46/229 (20%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+ +A VH GH+ + +M YIYG R I DL Q+ LL AL V+ R G +L
Sbjct: 11 LLEAGVHFGHQTHRWNPKMIRYIYGQRNNIHIIDLAQTVPLLHQALKLVSDTVARGGRIL 70
Query: 132 FVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------------- 166
FVG Q S +I A ++ W GM TN
Sbjct: 71 FVGTKRQASDIIADAANRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLDKILATETQGF 130
Query: 167 -----------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIPTVG 209
EKL RA+ + PDL+ + +T + N AI EA ++ IP +
Sbjct: 131 TKKERLNLERDREKLNRALGGIKDMGSVPDLIFIIDTN----KENIAIQEAKRLGIPVIA 186
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
I+D+NCNP+ + +P+PGNDD AI YC +F A L G +Q + +
Sbjct: 187 IIDTNCNPDNVDHPIPGNDDASRAISLYCDLFARAALDGIARQQGAMGI 235
>gi|406936242|gb|EKD70016.1| hypothetical protein ACD_46C00671G0004 [uncultured bacterium]
Length = 267
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 110/230 (47%), Gaps = 39/230 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++D+ A VH GH+ + +M YIYG R I DL ++ L +DALNF+ IA +
Sbjct: 3 ITIQDLLKAGVHFGHQTRYWNPKMGSYIYGSRNKIHIIDLGKTLPLFQDALNFIGGIAAK 62
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
G +LFVG LI++ A+ C+ R W GM TN + + +++ RL +L + ++
Sbjct: 63 KGKILFVGTKYAAQDLIQQEAERCKMPYVNRRWLGGMLTNYKTIRQSIKRLKELEAMFDS 122
Query: 187 ---------------------------------------LTTVLEPNPAIGEAAKMCIPT 207
+ V A+ EA ++ IP
Sbjct: 123 GKFGRLTKKEILGLEREKAKLLISLGGIKNMGGIPDALFVIDVGHEKIAVREANRLGIPV 182
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLK 257
+G+VDSN +P+ I+Y +PGNDD+ AI+YY AI + + + D ++
Sbjct: 183 IGVVDSNNDPDGISYIIPGNDDSTRAIRYYTSSVADAITEARASVLDNVE 232
>gi|392407745|ref|YP_006444353.1| 30S ribosomal protein S2 [Anaerobaculum mobile DSM 13181]
gi|390620881|gb|AFM22028.1| ribosomal protein S2 [Anaerobaculum mobile DSM 13181]
Length = 283
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 39/226 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + + VH GH+ D +MKPYI+ R G I DL ++ + A +F+ ++
Sbjct: 2 SVVSMKQLLECGVHFGHQTRRWDPKMKPYIFAERNGIYIIDLQKTVRAIERAYDFLREVS 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
G VLFVG Q I++ AQ C +F + W G+ TN + + V R+ +L +
Sbjct: 62 KGGGTVLFVGTKRQAQETIQEEAQRCGQFYINQRWLGGLLTNFSTISKRVRRMIELQEME 121
Query: 185 NT------------------------------------LTTVLEPNP---AIGEAAKMCI 205
V++P A+ EA ++ I
Sbjct: 122 EKGEFLKYPKKEAIKLRKEKERLEKYLGGIRDMKDVPDALFVIDPRREYIAVAEARRLYI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
P + +VD+NC+P LI YP+PGNDD AI+ + AI++G++
Sbjct: 182 PIISVVDTNCDPTLIDYPIPGNDDAIRAIKLITSLMADAIIEGRQG 227
>gi|217077270|ref|YP_002334988.1| 30S ribosomal protein S2 [Thermosipho africanus TCF52B]
gi|226697648|sp|B7IHT3.1|RS2_THEAB RecName: Full=30S ribosomal protein S2
gi|217037125|gb|ACJ75647.1| ribosomal protein S2 [Thermosipho africanus TCF52B]
Length = 259
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 107/225 (47%), Gaps = 39/225 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +MK YI+G R+G I DL ++++LL +A NFV A
Sbjct: 3 VLTMKQLLEAGVHFGHRTQRWNPKMKEYIFGARKGIYIIDLQKTSKLLDEAYNFVRDKAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT- 184
G +LFVG Q +I++ A+ C F W G+ TN E + + + +L +L +
Sbjct: 63 EGGTILFVGTKKQAQQVIKQEAERCGAFYVNHRWLGGLLTNFETIRKRIDKLIELEEMEA 122
Query: 185 ------------NTLTTVLE--------------------------PNPAIGEAAKMCIP 206
+ L +LE A+ EA + IP
Sbjct: 123 NGEFDHLPKKEQSRLRRILEKLRKNLGGLKNMTSLPDVIYIVDPRKERNAVYEANLLKIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
TV IVD+NC+P+ I Y +PGNDD AIQ A L+G++
Sbjct: 183 TVAIVDTNCDPDEIDYIIPGNDDAIRAIQLITSKIADAYLEGREG 227
>gi|222054620|ref|YP_002536982.1| 30S ribosomal protein S2 [Geobacter daltonii FRC-32]
gi|254764478|sp|B9M5C6.1|RS2_GEOSF RecName: Full=30S ribosomal protein S2
gi|221563909|gb|ACM19881.1| ribosomal protein S2 [Geobacter daltonii FRC-32]
Length = 255
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 107/237 (45%), Gaps = 39/237 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K++ +A VH GH+ + +MKPYI+G R G I DL ++ L + A NFV A
Sbjct: 4 ITMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKSAYNFVFEAAQA 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
+LFVG Q + + AQ C F W GM TN + +++ RL +
Sbjct: 64 GETMLFVGTKKQAQDSVAEEAQRCGMFFVNDRWLGGMLTNFSTVKQSIERLKRIDAMFAD 123
Query: 181 ------------------VILTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
V L TL + N A+ EA K+ IP
Sbjct: 124 GTIEAYTKKEALQMEKERVKLEKTLGGIKGMNKLPGLLFVIDPKNEEIAVSEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQE 264
V IVD+NC+P+ I Y +PGNDD AI+ A+++G +A+ L+ +E E
Sbjct: 184 VAIVDTNCDPDNIDYVIPGNDDAIRAIRLLTSKVADAMIEGGQARNTQLQTDTEGAE 240
>gi|163783684|ref|ZP_02178671.1| 30S ribosomal protein S2 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881009|gb|EDP74526.1| 30S ribosomal protein S2 [Hydrogenivirga sp. 128-5-R1-1]
Length = 269
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 113/238 (47%), Gaps = 47/238 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K++ +A VH GH + +M PY+YGV+ G I DL+++ LL +A NFV+ +
Sbjct: 1 MKELLEAGVHFGHSKSRWNPKMAPYLYGVKNGIHIIDLNRTLVLLEEAYNFVSDSVAQGA 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------SEKL 170
++FVG Q +I + A+ C + W G+ TN +E +
Sbjct: 61 DIVFVGTKRQAKEIIREEAERCGAYYVNERWVGGLLTNFQTVRRSIQKLNKLERMEAEGV 120
Query: 171 F-------------------------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
F R +T+LPDL+ + +T+ + AI EA K+ I
Sbjct: 121 FDVLPKKEVRRLRRQMEKMRKLYGGIREMTKLPDLMWVVDTIRESI----AIQEAKKLGI 176
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQ 263
P V I DSNC+P++I Y +PGNDD +I+ A+ +G+ ++ ++ + K+
Sbjct: 177 PVVAIADSNCDPDVIDYIIPGNDDAIKSIKLLTSKIADAVEEGRNRRESAEEVEARKE 234
>gi|395766769|ref|ZP_10447307.1| 30S ribosomal protein S2 [Bartonella doshiae NCTC 12862]
gi|395415381|gb|EJF81815.1| 30S ribosomal protein S2 [Bartonella doshiae NCTC 12862]
Length = 257
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 102/229 (44%), Gaps = 46/229 (20%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+ +A VH GH+ + +M PYIYG R I DL Q+ LL AL V+ R G +L
Sbjct: 11 LLEAGVHFGHQTHRWNPKMTPYIYGQRNNIHIIDLAQTVPLLHQALKLVSDTVARGGRIL 70
Query: 132 FVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------------- 166
FVG Q S +I A ++ W GM TN
Sbjct: 71 FVGTKRQASDIIADAANRSAQYYVNARWLGGMLTNWKTISHSIHRLRKLDKILAAEAQGF 130
Query: 167 -----------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIPTVG 209
EKL RA+ + PDL+ + +T + N AI EA ++ IP +
Sbjct: 131 TKKERLNLERDREKLNRALGGIKDMGSVPDLIFIIDT----NKENIAIQEAKRLGIPVIA 186
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
++D+NC+P+ I +P+PGNDD AI YC + A L G +Q + +
Sbjct: 187 VIDTNCDPDNIDHPIPGNDDASRAISLYCDLVARAALDGIARQQGAMGI 235
>gi|392412271|ref|YP_006448878.1| ribosomal protein S2 [Desulfomonile tiedjei DSM 6799]
gi|390625407|gb|AFM26614.1| ribosomal protein S2 [Desulfomonile tiedjei DSM 6799]
Length = 275
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 108/232 (46%), Gaps = 39/232 (16%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+L+ +K + +A VH GH+ + +MKPYI+G R G I DL ++ L + A +FV
Sbjct: 2 SLITMKQLLEAGVHFGHQTRRWNPKMKPYIFGARNGIYIIDLQKTVRLFKRAYSFVQETC 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL------- 177
VLFVG Q I++ A C +F + W GM TN + +++ RL
Sbjct: 62 ASGQSVLFVGTKKQAQDAIQEEASRCNQFYVNQRWLGGMLTNFSTIKQSIERLNHINAIL 121
Query: 178 ----------PDLV-------ILTNTLTTVLE---------------PNPAIGEAAKMCI 205
+LV L+ L+ + E N + EA K+ I
Sbjct: 122 DRPEETNYTKKELVNLQRQFEKLSKNLSGIREMKRLPGAVFIVDPKKENIGVKEARKLNI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLK 257
P V IVDSNC+P+ + Y +PGNDD AI+ + A ++G+ + +LK
Sbjct: 182 PIVAIVDSNCDPDEVDYVIPGNDDAIRAIRLFSAKMADACIEGRSMYEASLK 233
>gi|289662909|ref|ZP_06484490.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. vasculorum
NCPPB 702]
gi|289670220|ref|ZP_06491295.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. musacearum
NCPPB 4381]
Length = 267
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 39/235 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+++ L DA+NF++ IA +
Sbjct: 4 VTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSIAQK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G VLF+G I++ A+ C T+ W G TN + ++V RL +L
Sbjct: 64 RGTVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETD 123
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L +L + E N AI EA K+ IP
Sbjct: 124 GTFEKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+ +VD+N +P L+ Y +PGNDD A+Q Y + A+L+GK A ++ + E+
Sbjct: 184 IAVVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNSASVREEE 238
>gi|66769169|ref|YP_243931.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188992317|ref|YP_001904327.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris
str. B100]
gi|384427301|ref|YP_005636659.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. raphani 756C]
gi|81304871|sp|Q4USR2.1|RS2_XANC8 RecName: Full=30S ribosomal protein S2
gi|229559898|sp|B0RW65.1|RS2_XANCB RecName: Full=30S ribosomal protein S2
gi|66574501|gb|AAY49911.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris
str. 8004]
gi|167734077|emb|CAP52283.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris]
gi|341936402|gb|AEL06541.1| ribosomal protein S2 [Xanthomonas campestris pv. raphani 756C]
Length = 275
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 111/235 (47%), Gaps = 39/235 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+++ L DA+NF++ IA +
Sbjct: 4 VTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSIAQK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G VLF+G I++ A+ C T+ W G TN + ++V RL +L
Sbjct: 64 RGTVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETD 123
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L +L + E N AI EA K+ IP
Sbjct: 124 GTFEKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+ +VD+N +P L+ Y +PGNDD A+Q Y + A+L+GK A ++ + E+
Sbjct: 184 IAVVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNSASVREEE 238
>gi|161511149|ref|NP_539740.2| 30S ribosomal protein S2 [Brucella melitensis bv. 1 str. 16M]
gi|38258888|sp|Q8YHH6.2|RS2_BRUME RecName: Full=30S ribosomal protein S2
Length = 256
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 102/232 (43%), Gaps = 46/232 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M P+IYG R I DL Q+ LL AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMAPFIYGERNNIHILDLSQTVPLLNSALKVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VL+VG Q S +I ++ W GM TN
Sbjct: 68 RVLYVGTKRQASDIIADAGNRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLDELLAGEA 127
Query: 167 --------------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL RA+ + PDL+ + +T + AI EA ++ IP
Sbjct: 128 QGFTKKERLNLEREREKLDRALGGIKDMGSVPDLMFIIDTNKEAI----AIQEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
V ++DSNC+P+ I YP+PGNDD AI YC + A L G +Q + +
Sbjct: 184 VVAVIDSNCDPDQIDYPIPGNDDAARAIALYCDLIARAALDGIARQQGAMGI 235
>gi|83942429|ref|ZP_00954890.1| 30S ribosomal protein S2 [Sulfitobacter sp. EE-36]
gi|83846522|gb|EAP84398.1| 30S ribosomal protein S2 [Sulfitobacter sp. EE-36]
Length = 289
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM P+IYG R G I DL Q+ +L AL + + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMGPFIYGARNGIHIMDLTQTVPMLDQALQVIRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
+LFVG Q + I + A+ C ++ W G TN + + +++ RL
Sbjct: 68 SILFVGTKRQAAQPIAEAAEKCAQYYMNHRWLGGTLTNWQTVSKSIQRLKSIDEQSERGF 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + L A+ EA K+ IP
Sbjct: 128 SGLTKKERLGMERDQAKLEASLGGIREMGGRPDLIFVIDVKKEAL----AVAEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
+ +VD+NC+P+ I Y +PGNDD AI YC + A L G A+
Sbjct: 184 VIAVVDTNCSPDGIDYIIPGNDDAARAIHMYCDLAARAALDGMSAQ 229
>gi|319786515|ref|YP_004145990.1| 30S ribosomal protein S2 [Pseudoxanthomonas suwonensis 11-1]
gi|317465027|gb|ADV26759.1| ribosomal protein S2 [Pseudoxanthomonas suwonensis 11-1]
Length = 271
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 109/224 (48%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++ M +A VH GH+ + +M PYI+G R I +L+++ L +DA+NF++ IA +
Sbjct: 4 ITMRQMLEAGVHFGHQTRYWNPKMGPYIFGARGKIHIINLEKTVPLFQDAMNFISGIAQK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LF+G +++ A+ C T+ W G TN + ++V+RL +L
Sbjct: 64 RGTILFLGTKRSARDAMKEEAERCGMPYMTQRWLGGTLTNFRTVKQSVSRLKELEAAETD 123
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L +L + + N AI EA K+ IP
Sbjct: 124 GTFEKLVKHEVLGLRRERDKLEASLGGIKDMNRLPDALFVIDIGHEDIAIKEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V +VD+N +PNL+ Y +PGNDD A+Q Y + A+L+GK A
Sbjct: 184 VAVVDTNYDPNLVDYAIPGNDDAIRAVQLYARAAADAVLEGKAA 227
>gi|294102178|ref|YP_003554036.1| 30S ribosomal protein S2 [Aminobacterium colombiense DSM 12261]
gi|293617158|gb|ADE57312.1| ribosomal protein S2 [Aminobacterium colombiense DSM 12261]
Length = 266
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 115/241 (47%), Gaps = 40/241 (16%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + + VH GH+ + +MKPYI+ R G I DL ++ L A FV IA
Sbjct: 2 SVVSMKQLLECGVHFGHQTRRWNPKMKPYIFTERNGVYIIDLQKTVRGLEKAYAFVREIA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
+G +LFVG Q I + A+ ++ + W G+ TN + + VTR+ +L
Sbjct: 62 QNNGSLLFVGTKRQAQDTIREEAERSGQYFINQRWLGGLLTNFSTIRKRVTRMVELRKMA 121
Query: 181 -------------VILTNTLTT-------------------VLEPNP---AIGEAAKMCI 205
+L L +++P AI EA K+ I
Sbjct: 122 AEDNWSNLPKKEVALLKKELAKLEKYLSGIAGMKNVPDALFLIDPRREEIAILEAKKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ-DTLKLLSEKQE 264
P + IVD+NC+P +I YP+PGNDD AI+ + A+++G++ + D K++ E +E
Sbjct: 182 PVIAIVDTNCDPEMIDYPIPGNDDAIRAIKLISGLMADAMIEGRQGEDADVKKVVEEGEE 241
Query: 265 V 265
V
Sbjct: 242 V 242
>gi|390448085|ref|ZP_10233708.1| 30S ribosomal protein S2 [Nitratireductor aquibiodomus RA22]
gi|389666724|gb|EIM78168.1| 30S ribosomal protein S2 [Nitratireductor aquibiodomus RA22]
Length = 264
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 46/234 (19%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++ + +A VH GH+ + +M YI+G R I DL Q+ L+ AL V+ +
Sbjct: 6 ISMRQLLEAGVHFGHQTHRWNPKMSNYIFGARNNVHIIDLSQTVPLMHQALKAVSDTVAK 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
G +LFVG Q S ++ +A+ ++ W GM TN
Sbjct: 66 GGRILFVGTKRQASEIVADSAKRSAQYYVNARWLGGMLTNWKTISNSIQRLRKLDELLAA 125
Query: 167 ----------------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMC 204
EKL RA+ + PDL+ + +T + A+ EA ++
Sbjct: 126 DAQGFTKKERLNLEREREKLDRALGGIRDMGSTPDLMFVIDTNKEAI----AVQEAKRLG 181
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
IP V IVDSNC+P+++ YP+PGNDD A+ YC + A + G + +Q L L
Sbjct: 182 IPVVAIVDSNCDPDVVDYPIPGNDDAARALALYCDLVAKAAIDGIERQQGALGL 235
>gi|389877640|ref|YP_006371205.1| 30S ribosomal protein S2 [Tistrella mobilis KA081020-065]
gi|388528424|gb|AFK53621.1| 30S ribosomal protein S2 [Tistrella mobilis KA081020-065]
Length = 268
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 103/219 (47%), Gaps = 39/219 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM PY+YG R G I DL ++ L A+ V I G
Sbjct: 8 MRQLLEAGVHFGHQSRRWNPRMAPYLYGTRNGIHIIDLRETQPQLYRAMEAVRDIVANRG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------P 178
VLFVG Q L+ + A+ C ++ R W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQAQELVAEGAKRCGQYYVNRRWLGGMLTNWQTISNSIRRLREIEQLLDQQA 127
Query: 179 DLVILTNTLTT--------------------------VLEPNP---AIGEAAKMCIPTVG 209
DL + L V++ N A+ EAAK+ IP +
Sbjct: 128 DLGLTKKELLKLTRQRDNLEASLGGIKDMGGLPDALFVIDTNKEELAVREAAKLGIPVIA 187
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
I+DSN NP+ +T+PV GNDD+ AIQ Y ++ A+L G
Sbjct: 188 ILDSNSNPDGVTFPVAGNDDSTKAIQLYLELVSGAVLDG 226
>gi|325923979|ref|ZP_08185568.1| SSU ribosomal protein S2P [Xanthomonas gardneri ATCC 19865]
gi|325545562|gb|EGD16827.1| SSU ribosomal protein S2P [Xanthomonas gardneri ATCC 19865]
Length = 279
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 111/235 (47%), Gaps = 39/235 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+++ L DA+NF++ IA +
Sbjct: 4 VTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSIAQK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LF+G I++ A+ C T+ W G TN + ++V RL +L
Sbjct: 64 RGTILFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETD 123
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L +L + E N AI EA K+ IP
Sbjct: 124 GTFEKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+ +VD+N +P L+ Y +PGNDD A+Q Y + A+L+GK A ++ + E+
Sbjct: 184 IAVVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNSASVREEE 238
>gi|109897574|ref|YP_660829.1| 30S ribosomal protein S2 [Pseudoalteromonas atlantica T6c]
gi|123171513|sp|Q15WG3.1|RS2_PSEA6 RecName: Full=30S ribosomal protein S2
gi|109699855|gb|ABG39775.1| SSU ribosomal protein S2P [Pseudoalteromonas atlantica T6c]
Length = 243
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 39/223 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ L +ALN++ +A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNNALNYIGSVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G +LFVG S + A C +F + W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASDSVRDAAVKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKDLEQQSQD 123
Query: 181 ------------------VILTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L N+L + AI EA + IP
Sbjct: 124 GTFDKITKKEVLMLQREMAKLENSLGGIKNMGGLPDCLFVVDADHEHIAITEARNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
V IVD+N NP+ + Y +PGNDD A+Q Y A+++G++
Sbjct: 184 VSIVDTNSNPDGVDYIIPGNDDAIRAVQLYLNSAADAVIEGRE 226
>gi|20807856|ref|NP_623027.1| 30S ribosomal protein S2 [Thermoanaerobacter tengcongensis MB4]
gi|25009202|sp|Q8RA21.1|RS2_THETN RecName: Full=30S ribosomal protein S2
gi|20516420|gb|AAM24631.1| Ribosomal protein S2 [Thermoanaerobacter tengcongensis MB4]
Length = 235
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + +A VH GH+ + +M PYI+ R G I DL Q+ E L A FV +
Sbjct: 2 SIVSMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKKLV 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
G +LFVG Q I++ A+ C F + W G TN + + + RL +L +
Sbjct: 62 MDGGTILFVGTKKQAQESIKEEAERCGMFYVNQRWLGGTLTNFKTIKTRIQRLKELKRME 121
Query: 185 NTLTTVLEPNP---------------------------------------AIGEAAKMCI 205
T + P A+ EA + I
Sbjct: 122 EDGTFEVLPKKEVIRLRKEKERLQKFLGGIENMESLPSALFIVDPKKEAIAVSEARALEI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P V IVD+NC+P LI YP+PGNDD A++ A+L+GK+ +Q
Sbjct: 182 PIVAIVDTNCDPELIDYPIPGNDDAIRAVKLITSKIADAVLEGKQGEQ 229
>gi|410618529|ref|ZP_11329472.1| small subunit ribosomal protein S2 [Glaciecola polaris LMG 21857]
gi|410161913|dbj|GAC33610.1| small subunit ribosomal protein S2 [Glaciecola polaris LMG 21857]
Length = 243
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 39/223 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ L +ALN++ +A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGSRNKVHIINLEKTVPLFNNALNYIGGVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G +LFVG S + A C +F + W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASDAVRDAAIKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKDLEQQSQD 123
Query: 181 ------------------VILTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L N+L + AI EA + IP
Sbjct: 124 GTFDKITKKEVLMLQREMAKLENSLGGIKNMGGLPDCLFVVDADHEHIAITEARNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
V IVD+N NP+ + Y +PGNDD A+Q Y A+++G++
Sbjct: 184 VSIVDTNSNPDGVDYIIPGNDDAIRAVQLYLNTAADAVIEGRE 226
>gi|372281538|ref|ZP_09517574.1| 30S ribosomal protein S2 [Oceanicola sp. S124]
Length = 260
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 101/226 (44%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM +IYG R G I DL Q+ +L ALN + ++G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMGEFIYGARNGIHILDLTQTVPMLDAALNVIRDTVAKNG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S I + A+ C ++ W G TN + + +++ RL
Sbjct: 68 RVLFVGTKRQASAPIAEAAEKCAQYYMNHRWLGGTLTNWKTVSQSINRLKEIDEKMEGGA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + V + AI EA K+ IP
Sbjct: 128 EGLTKKERLQMEREQGKLQASLGGIREMGGVPDLLFIID----VKKEQLAIAEAKKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V IVD+NC+P + Y +PGNDD AI YC + A L G A+
Sbjct: 184 VVAIVDTNCSPEGVDYIIPGNDDAARAIALYCDLASRAALDGMTAQ 229
>gi|384208873|ref|YP_005594593.1| 30S ribosomal protein S2 [Brachyspira intermedia PWS/A]
gi|343386523|gb|AEM22013.1| 30S ribosomal protein S2 [Brachyspira intermedia PWS/A]
Length = 273
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 40/228 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+KD+ +A VH GH D RMKP+I+ R I DL ++ ++ A V +A G
Sbjct: 8 MKDLLEAGVHFGHPTRKWDPRMKPFIFQERNDIYIIDLMKTLTYVKKAHEAVKEMARNGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-------- 180
VLFVG Q S I++ A+ C + W GM TN + +++ RL +
Sbjct: 68 NVLFVGTKKQASQSIKEAAEKCDMYYVNNRWLGGMLTNFATIKKSIARLKKIEKEEVDGT 127
Query: 181 --------VILTNTLTTVLEPN-----------------------PAIGEAAKMCIPTVG 209
VIL LE N A+ EA K+ IP V
Sbjct: 128 FDKLPKKEVILLLKEKERLEKNFAGIKDMENLPDMLFVIDPMQEAIAVSEARKLGIPVVA 187
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK-KAKQDTL 256
+VD+NCNP +I +P+PGNDD AI + V +A+++G+ +A ++TL
Sbjct: 188 VVDTNCNPEVIDHPIPGNDDAIRAISLFAGVVASAVIEGQNEAGKETL 235
>gi|269958681|ref|YP_003328468.1| 30S ribosomal protein S2 [Anaplasma centrale str. Israel]
gi|269848510|gb|ACZ49154.1| 30S ribosomal protein S2 [Anaplasma centrale str. Israel]
Length = 340
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 111/223 (49%), Gaps = 40/223 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQII--FDLDQSAELLRDALNFVAHIAYR 126
++D+ +A VHLGHK G + M PYIYGV + + I DL ++ LLRDAL+ + + +
Sbjct: 30 IRDLVEAGVHLGHKAGRWNPAMAPYIYGVHKYKDIHVIDLRKTLVLLRDALSVLYDVVLK 89
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
G VLFVG Q S +I + A C ++ W GM TN E + ++ RL
Sbjct: 90 RGRVLFVGTKVQASNMIAEEATRCGQYYVNHRWLGGMLTNWETVSSSIRRLVEFEKLISN 149
Query: 178 -------PDLVIL-------TNTLTTVLEPNP---------------AIGEAAKMCIPTV 208
+L++L +L + E AI EA K+ IP V
Sbjct: 150 NEGQFTKKELLMLDKQRGKLERSLGGIREMGGLPHALFVIDTNKEHIAIREANKLRIPVV 209
Query: 209 GIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
++D+N +P+ + YP+PGNDD+ +I ++C+ IL+ ++
Sbjct: 210 AVLDTNSDPSGVDYPIPGNDDSVRSIDFFCRAVSKTILEAIRS 252
>gi|410626424|ref|ZP_11337185.1| small subunit ribosomal protein S2 [Glaciecola mesophila KMM 241]
gi|410153963|dbj|GAC23954.1| small subunit ribosomal protein S2 [Glaciecola mesophila KMM 241]
Length = 243
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 39/223 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ L +ALN++ +A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNNALNYIGGVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G +LFVG S + A C +F + W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASDSVRDAAVKCDQFYVNKRWLGGMLTNWKTVRQSIKRLKDLEQQSQD 123
Query: 181 ------------------VILTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L N+L + AI EA + IP
Sbjct: 124 GTFDKITKKEVLMLQREMAKLENSLGGIKNMGGLPDCLFVVDADHEHIAITEARNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
V IVD+N NP+ + Y +PGNDD A+Q Y A+++G++
Sbjct: 184 VSIVDTNSNPDGVDYIIPGNDDAIRAVQLYLNSAADAVIEGRE 226
>gi|381394696|ref|ZP_09920408.1| small subunit ribosomal protein S2 [Glaciecola punicea DSM 14233 =
ACAM 611]
gi|379329663|dbj|GAB55541.1| small subunit ribosomal protein S2 [Glaciecola punicea DSM 14233 =
ACAM 611]
Length = 241
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM +A VH GH+ + +M +I+G R I +L+++ L DAL+F+ +A+R
Sbjct: 4 VSMRDMLNAGVHFGHQTRYWNPKMAQFIFGARNKVHIINLEKTVPLFNDALSFLQSVAHR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G +LFVG S ++++A C ++ + W GM TN + + +++ RL +L
Sbjct: 64 KGKILFVGTKRAASDAVKESALRCGQYYVNKRWLGGMLTNWKTVRQSINRLKELEAQSAD 123
Query: 181 ----------VILTNTLTTVLEPN-----------------------PAIGEAAKMCIPT 207
V+L N T LE + AI EA + IP
Sbjct: 124 GTFDKLTKKEVLLLNREMTKLESSLGGIKNMGGLPDVIFVIDADHEHIAITEARNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
V IVD+N NP+ + Y +PGNDD A+Q Y A+L+ +
Sbjct: 184 VSIVDTNSNPDGVDYIIPGNDDAIRAVQLYTNAVADAVLEDR 225
>gi|407785559|ref|ZP_11132706.1| 30S ribosomal protein S2 [Celeribacter baekdonensis B30]
gi|407202509|gb|EKE72499.1| 30S ribosomal protein S2 [Celeribacter baekdonensis B30]
Length = 257
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 102/222 (45%), Gaps = 46/222 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM+ +IYG R G IFDL Q+ +L AL V A + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMQEFIYGERNGIHIFDLTQTLPMLEQALQVVRDTAAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
+LFVG Q + + + A+ C ++ W G TN + + +++ RL
Sbjct: 68 RILFVGTKRQAAGPVAEAAEKCAQYYMNHRWLGGTLTNWKTVSQSIQRLNMIDESLANGA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + V + + AI EA K+ IP
Sbjct: 128 EGLTKKERLNMERDQAKLQASLGGIREMGGVPDLLFVID----VKKEDLAILEAKKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
V +VDSNC+PN + Y +PGNDD AI YC + A L G
Sbjct: 184 VVAVVDSNCSPNGVDYIIPGNDDASRAISLYCDLVARAALAG 225
>gi|114768793|ref|ZP_01446419.1| 30S ribosomal protein S2 [Rhodobacterales bacterium HTCC2255]
gi|114549710|gb|EAU52591.1| 30S ribosomal protein S2 [Rhodobacterales bacterium HTCC2255]
Length = 344
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 99/226 (43%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM YIYG R G I DL Q+ LL ALN V + G
Sbjct: 8 LRQLLEAGVHFGHQTHRWNPRMDQYIYGSRNGIHIMDLTQTVPLLDQALNVVRETVSKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
+LFVG Q S + + A+ ++ W G TN + + +++ RL
Sbjct: 68 RILFVGTKRQASKAVAEAAERSAQYYMNHRWLGGTLTNWQTVSKSIQRLKAISAQMETGF 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T L A+ EA K+ IP
Sbjct: 128 DGLTKKERLGMEREHAKLHASLNGIAEMGGTPDLLFVIDTNKEAL----AVAEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
+GI+D+N P I YP+PGNDD AI YC + + L G A+
Sbjct: 184 VIGILDTNSAPEGIDYPIPGNDDAARAIGLYCDLIARSALDGMAAQ 229
>gi|150020818|ref|YP_001306172.1| 30S ribosomal protein S2 [Thermosipho melanesiensis BI429]
gi|166226766|sp|A6LLI6.1|RS2_THEM4 RecName: Full=30S ribosomal protein S2
gi|149793339|gb|ABR30787.1| ribosomal protein S2 [Thermosipho melanesiensis BI429]
Length = 257
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 107/225 (47%), Gaps = 39/225 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +MK YI+G R+G I DL ++++LL +A NFV A
Sbjct: 3 VVTMKQLLEAGVHFGHRTQRWNPKMKEYIFGARKGIYIIDLQKTSKLLEEAYNFVRDKAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G +LFVG Q +I++ A+ C F W G+ TN + + + + +L +L +
Sbjct: 63 EGGTILFVGTKKQAQQVIKQEAERCGAFYVNHRWLGGLLTNFQTIRKRIDKLIELEEMEA 122
Query: 186 T------------------------------------LTTVLEPNP---AIGEAAKMCIP 206
+ +++P A+ EA + IP
Sbjct: 123 NGEFDNLPKKEQSRLRRILDKLRKNLGGLKEMDRIPDVIYIVDPRKERNAVYEANLLKIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
TV IVD+NC+P+ I Y +PGNDD AIQ A L+GK+
Sbjct: 183 TVSIVDTNCDPDEIDYIIPGNDDAIRAIQLITSKIADAYLEGKEG 227
>gi|225619456|ref|YP_002720703.1| 30S ribosomal protein S2 [Brachyspira hyodysenteriae WA1]
gi|225214275|gb|ACN83009.1| 30S ribosomal protein S2 [Brachyspira hyodysenteriae WA1]
Length = 266
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 40/228 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+KD+ +A VH GH D RMKP+I+ R I DL ++ ++ A V +A G
Sbjct: 1 MKDLLEAGVHFGHPTRKWDPRMKPFIFQERNDIYIIDLMKTLTYVKKAHEAVKEMARNGG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-------- 180
VLFVG Q S I++ A+ C + W GM TN + +++ RL +
Sbjct: 61 NVLFVGTKKQASQSIKEAAEKCDMYYVNNRWLGGMLTNFATIKKSIARLKKIEKEEVDGT 120
Query: 181 --------VILTNTLTTVLEPN-----------------------PAIGEAAKMCIPTVG 209
VIL LE N A+ EA K+ IP V
Sbjct: 121 FDKLPKKEVILLLKEKERLEKNFAGIKDMENLPDMLFVIDPMQEAIAVSEARKLGIPVVA 180
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK-KAKQDTL 256
+VD+NCNP +I +P+PGNDD AI + V +A+++G+ +A ++TL
Sbjct: 181 VVDTNCNPEVIDHPIPGNDDAIRAISLFAGVVASAVIEGQNEAGKETL 228
>gi|78047035|ref|YP_363210.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|346724323|ref|YP_004850992.1| 30S ribosomal protein S2 [Xanthomonas axonopodis pv. citrumelo F1]
gi|123757529|sp|Q3BVK3.1|RS2_XANC5 RecName: Full=30S ribosomal protein S2
gi|78035465|emb|CAJ23110.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|346649070|gb|AEO41694.1| 30S ribosomal protein S2 [Xanthomonas axonopodis pv. citrumelo F1]
Length = 265
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 111/235 (47%), Gaps = 39/235 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+++ L DA+NF++ +A +
Sbjct: 4 VTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSVAQK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G VLF+G I++ A+ C T+ W G TN + ++V RL +L
Sbjct: 64 RGTVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETD 123
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L +L + E N AI EA K+ IP
Sbjct: 124 GTFDKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+ +VD+N +P L+ Y +PGNDD A+Q Y + A+L+GK A ++ + E+
Sbjct: 184 IAVVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNSASVREEE 238
>gi|357420020|ref|YP_004933012.1| 30S ribosomal protein S2 [Thermovirga lienii DSM 17291]
gi|355397486|gb|AER66915.1| SSU ribosomal protein S2P [Thermovirga lienii DSM 17291]
Length = 285
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 39/226 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + ++ VH GH+ + +MKPYI+ R G I DL ++ + L A +F+ ++
Sbjct: 2 SVVSMKQLLESGVHFGHQTRRWNPKMKPYIFTERNGVYILDLQKTVKGLERAYDFLREVS 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
G VLFVG Q I A C +F W G+ TN + R V R+ +L L
Sbjct: 62 KGGGSVLFVGTKKQAQETIRDEALRCGQFYINHRWLGGLLTNFSTIRRRVNRMIELQELE 121
Query: 185 NTLT------------------------------------TVLEP---NPAIGEAAKMCI 205
+ +++P N A+ EA K+ I
Sbjct: 122 EKESMERMSKKELAALKKERAKLEKFLLGIKDMRSLPDALVIVDPRRENIAVMEARKLNI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
P V IVD+NC+P+LI +P+PGNDD AI+ AI++GK+
Sbjct: 182 PIVAIVDTNCDPDLIDFPIPGNDDAIRAIRLIIGTLANAIIEGKQG 227
>gi|406943710|gb|EKD75645.1| hypothetical protein ACD_44C00069G0004 [uncultured bacterium]
Length = 260
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +KDM +A VH GH+ + M PY+YG R I +L+++ RDALNFV ++A +
Sbjct: 3 VTMKDMLEAGVHFGHQTRYWNPEMAPYLYGARNKIHIINLEKTLPYFRDALNFVGNLASK 62
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
+LFVG + I++ A C W G+ TN + + +++ RL ++ +
Sbjct: 63 KAKILFVGTKRAAQVAIKEQAIRCHMPYINHRWLGGLLTNYKTVRQSIKRLREVESMETD 122
Query: 187 LT---------------------------------------TVLEPNPAIGEAAKMCIPT 207
T V N A+ EA KM IP
Sbjct: 123 GTLEKITKKERLMIAREKQKLERSLGGIKSMGGLPDALFVIDVGHENIAVKEAKKMKIPV 182
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+G+VDSN +P I Y +PGNDD A+Q+Y AIL+G+
Sbjct: 183 IGVVDSNNSPREIDYVIPGNDDALRAVQFYATAIADAILEGR 224
>gi|7524785|ref|NP_045787.1| ribosomal protein S2 [Chlorella vulgaris]
gi|3024553|sp|P56351.1|RR2_CHLVU RecName: Full=30S ribosomal protein S2, chloroplastic
gi|2224378|dbj|BAA57862.1| 30S ribosomal protein S2 [Chlorella vulgaris]
Length = 267
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 102/226 (45%), Gaps = 47/226 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
VK++DM + +H GH + RM PYIYG R G+ I DL Q+ LL L F+ A +
Sbjct: 5 VKLEDMIQSGMHFGHSTREWNPRMAPYIYGERNGRHILDLVQTYYLLNKVLAFLEEQAAQ 64
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS------------------- 167
LFVG Q + LI KTA C+ F + W GM TN
Sbjct: 65 GKTFLFVGTKQQAAPLIAKTALACESFYVNQRWLGGMLTNWRTIQKSLRKLQEYRRAEER 124
Query: 168 ---------------------EKLFRAV---TRLPDLVILTNTLTTVLEPNPAIGEAAKM 203
EK V +RLP +VIL + A+ E ++
Sbjct: 125 GDWNLLKKQEVARKRREKDRLEKYLSGVENMSRLPGVVILIGQTEEI----HAVKECRQL 180
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IPTV ++DSNC+PNL + +P NDD+ SA++ F+ AI G+
Sbjct: 181 GIPTVTLLDSNCDPNLADWFLPANDDSVSALRLILAWFQQAIQTGQ 226
>gi|297717884|gb|ADI50085.1| SSU ribosomal protein S2p [Candidatus Odyssella thessalonicensis
L13]
Length = 254
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A +H GH + +M P+++GVR I DL+Q+ LL AL + + G
Sbjct: 8 MRQLLEAGIHYGHHTRRWNPKMAPFLFGVRNNIHIIDLEQTVNLLHRALEAIRNTVAAGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR------------ 176
VLFVG Q S +++ A C ++ W G TN + + +++ R
Sbjct: 68 RVLFVGTKPQASAKVKEAALKCGQYYINHRWLGGTLTNWKTVNQSIKRMKEQEERLNQHS 127
Query: 177 ------------------------------LPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
LPDL+ + +T + AI EA ++ IP
Sbjct: 128 QGLTKKEQLDLQREYNKLELALGGIRDMGGLPDLLFVIDTNKEAI----AIQEARRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
VG++DSN +P ++YP+PGNDD AIQ YC++ A+L G +A+
Sbjct: 184 VVGVLDSNSDPAGVSYPIPGNDDAQRAIQMYCELVAGAVLDGLQAE 229
>gi|344925115|ref|ZP_08778576.1| 30S ribosomal protein S2 [Candidatus Odyssella thessalonicensis
L13]
Length = 255
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A +H GH + +M P+++GVR I DL+Q+ LL AL + + G
Sbjct: 8 MRQLLEAGIHYGHHTRRWNPKMAPFLFGVRNNIHIIDLEQTVNLLHRALEAIRNTVAAGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR------------ 176
VLFVG Q S +++ A C ++ W G TN + + +++ R
Sbjct: 68 RVLFVGTKPQASAKVKEAALKCGQYYINHRWLGGTLTNWKTVNQSIKRMKEQEERLNQHS 127
Query: 177 ------------------------------LPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
LPDL+ + +T + AI EA ++ IP
Sbjct: 128 QGLTKKEQLDLQREYNKLELALGGIRDMGGLPDLLFVIDTNKEAI----AIQEARRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
VG++DSN +P ++YP+PGNDD AIQ YC++ A+L G +A+
Sbjct: 184 VVGVLDSNSDPAGVSYPIPGNDDAQRAIQMYCELVAGAVLDGLQAE 229
>gi|365873885|ref|ZP_09413418.1| ribosomal protein S2 [Thermanaerovibrio velox DSM 12556]
gi|363983972|gb|EHM10179.1| ribosomal protein S2 [Thermanaerovibrio velox DSM 12556]
Length = 280
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 107/225 (47%), Gaps = 39/225 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + + VH GH+ + +MKPYI+ R G I DL ++ + L A +FV +A
Sbjct: 3 VVSMKQLLECGVHFGHQTRRWNPKMKPYIFTERNGIYIIDLQKTVKGLERAYSFVREVAK 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
G +LFVG Q I A C +F + W G+ TN + R + R+ +L
Sbjct: 63 EGGSMLFVGTKRQAQEPIRNEALRCGQFYINQRWLGGLLTNFATIRRRINRMIELQKMEA 122
Query: 181 -----------VI--------LTNTLTT------------VLEP---NPAIGEAAKMCIP 206
+I L L+ V++P N A+ EAAK+ IP
Sbjct: 123 DGSINRYPKKEIIQLRKEREKLEKYLSGIRDMRDMPDALFVIDPRRENIAVLEAAKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V IVD+NC+P LI YP+PGNDD AI+ + A ++G++
Sbjct: 183 VVAIVDTNCDPELIDYPIPGNDDAIRAIELITGLMANAFIEGRQG 227
>gi|389736331|ref|ZP_10189892.1| 30S ribosomal protein S2, partial [Rhodanobacter sp. 115]
gi|389737062|ref|ZP_10190551.1| 30S ribosomal protein S2, partial [Rhodanobacter sp. 115]
gi|388437781|gb|EIL94553.1| 30S ribosomal protein S2, partial [Rhodanobacter sp. 115]
gi|388439498|gb|EIL96049.1| 30S ribosomal protein S2, partial [Rhodanobacter sp. 115]
Length = 279
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 108/225 (48%), Gaps = 41/225 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+++ L DA+NF++ +A +
Sbjct: 4 VTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTLPLFTDAMNFLSGLAQK 63
Query: 127 DGIVLFVG-QSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI--- 182
G +LFVG + + L E+ A+ F R W GM TN + ++V RL +L
Sbjct: 64 RGTILFVGTKRSAREPLAEEAARAGMPFVTAR-WLGGMLTNFRTVKQSVARLKELEAAET 122
Query: 183 ---------------------LTNTLTTVLEPNP---------------AIGEAAKMCIP 206
L N+L + N A+ EA K+ IP
Sbjct: 123 DGSFDKLVKHEVLARRRERDKLENSLGGIKNMNRLPDALFVIDIGHEDIAVQEAKKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+ +VD+N NP L+ Y +PGNDD AIQ Y + +IL+GK A
Sbjct: 183 VIAVVDTNYNPELVDYAIPGNDDAIRAIQLYARAAADSILEGKAA 227
>gi|300869880|ref|YP_003784751.1| 30S ribosomal protein S2 [Brachyspira pilosicoli 95/1000]
gi|300687579|gb|ADK30250.1| 30S ribosomal protein S2 [Brachyspira pilosicoli 95/1000]
Length = 273
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 110/232 (47%), Gaps = 40/232 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+L +KD+ +A VH GH+ + +MKP+I+ R I DL ++ ++ A + V ++
Sbjct: 4 SLPAMKDLLEAGVHFGHQTRKWNPKMKPFIFQERNDIHIIDLMKTLTYVKKAYDAVKEMS 63
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
G +LFVG Q S I++ A+ C + W GM TN + +++ RL +
Sbjct: 64 RNGGNILFVGTKKQASQSIKEAAEKCDMYYVNNRWLGGMLTNFATIKKSIARLKRIEKEE 123
Query: 181 ------------VILTNTLTTVLEPN-----------------------PAIGEAAKMCI 205
VIL LE N A+ EA K+ I
Sbjct: 124 VDGTFDKLPKKEVILLLKEKDKLEKNFAGIKDMENLPDMIFVIDPMQEHIAVSEARKLGI 183
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK-KAKQDTL 256
P V +VD+NCNP LI YP+PGNDD AI + V +AI+ G+ +A ++TL
Sbjct: 184 PVVAVVDTNCNPELIDYPIPGNDDAIRAISLFAGVISSAIIDGQNEAGKETL 235
>gi|336367140|gb|EGN95485.1| hypothetical protein SERLA73DRAFT_94949 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379858|gb|EGO21012.1| hypothetical protein SERLADRAFT_363187 [Serpula lacrymans var.
lacrymans S7.9]
Length = 310
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+ A HLGH ++ PY YGVR G I DLD + LLR A N V I RDG V+
Sbjct: 97 LIAAGAHLGHSKSLMNPNFMPYAYGVRAGITIIDLDHTLPLLRRAANLVRAIVSRDGTVV 156
Query: 132 FVGQSAQNSLLIEKTAQDC--QEFAHTRFWRQGMFTNSEKLF-----RAVTRLPDLVILT 184
FVG + + K A+ Q F W G TN ++F + PDL I
Sbjct: 157 FVGTRPDLRVTVRKAAERIGPQAFHVGERWLPGTLTNKLQMFGPEVSKEQRIAPDLAIFL 216
Query: 185 NTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTA 244
N L+ + AI E A +PT+GIVD+N +P ++ YP+P ND+ P + + A
Sbjct: 217 NPLSNMH----AIRECAIQHVPTIGIVDTNVDPRIVMYPIPANDEHPRTAELIAGILSVA 272
Query: 245 ILKGK 249
+G+
Sbjct: 273 GREGR 277
>gi|451940570|ref|YP_007461208.1| 30S ribosomal protein S2 [Bartonella australis Aust/NH1]
gi|451899957|gb|AGF74420.1| 30S ribosomal protein S2 [Bartonella australis Aust/NH1]
Length = 280
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 102/230 (44%), Gaps = 46/230 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M PYIYG R I DL Q+ LL AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMAPYIYGQRNDIHIIDLAQTVPLLHQALKLVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S +I A ++ W GM TN
Sbjct: 68 RVLFVGTKRQASDIIADAAGRSAQYYVNARWLGGMLTNWKTISNSIHRLRKLDKILAAEA 127
Query: 167 --------------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL RA+ + PDL+ + +T + AI EA ++ IP
Sbjct: 128 QGFTKKERLNLERDREKLNRALGGIKDMGSVPDLIFIIDTNKEGI----AIQEAKRLNIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTL 256
V ++D+NC+P+ I YP+PGNDD A+ YC + A L G +Q +
Sbjct: 184 VVAVIDTNCDPDDIDYPIPGNDDASRAVALYCDLVARAALDGIARQQGAM 233
>gi|434381878|ref|YP_006703661.1| 30S ribosomal protein S2 [Brachyspira pilosicoli WesB]
gi|404430527|emb|CCG56573.1| 30S ribosomal protein S2 [Brachyspira pilosicoli WesB]
Length = 271
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 110/232 (47%), Gaps = 40/232 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+L +KD+ +A VH GH+ + +MKP+I+ R I DL ++ ++ A + V ++
Sbjct: 2 SLPAMKDLLEAGVHFGHQTRKWNPKMKPFIFQERNDIHIIDLMKTLTYVKKAYDAVKEMS 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
G +LFVG Q S I++ A+ C + W GM TN + +++ RL +
Sbjct: 62 RNGGNILFVGTKKQASQSIKEAAEKCDMYYVNNRWLGGMLTNFATIKKSIARLKRIEKEE 121
Query: 181 ------------VILTNTLTTVLEPN-----------------------PAIGEAAKMCI 205
VIL LE N A+ EA K+ I
Sbjct: 122 VDGTFDKLPKKEVILLLKEKDKLEKNFAGIKDMENLPDMIFVIDPMQEHIAVSEARKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK-KAKQDTL 256
P V +VD+NCNP LI YP+PGNDD AI + V +AI+ G+ +A ++TL
Sbjct: 182 PVVAVVDTNCNPELIDYPIPGNDDAIRAISLFAGVISSAIIDGQNEAGKETL 233
>gi|406595861|ref|YP_006746991.1| 30S ribosomal protein S2 [Alteromonas macleodii ATCC 27126]
gi|407682812|ref|YP_006797986.1| 30S ribosomal protein S2 [Alteromonas macleodii str. 'English
Channel 673']
gi|407686727|ref|YP_006801900.1| 30S ribosomal protein S2 [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|407699167|ref|YP_006823954.1| 30S ribosomal protein S2 [Alteromonas macleodii str. 'Black Sea
11']
gi|406373182|gb|AFS36437.1| 30S ribosomal protein S2 [Alteromonas macleodii ATCC 27126]
gi|407244423|gb|AFT73609.1| 30S ribosomal protein S2 [Alteromonas macleodii str. 'English
Channel 673']
gi|407248314|gb|AFT77499.1| 30S ribosomal protein S2 [Alteromonas macleodii str. 'Black Sea
11']
gi|407290107|gb|AFT94419.1| 30S ribosomal protein S2 [Alteromonas macleodii str. 'Balearic Sea
AD45']
Length = 243
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ L +ALN+++ +A +
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNNALNYLSGVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLV----- 181
G +LFVG ++ A C ++ + W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAAGEAVKDAALKCDQYYVNKRWLGGMLTNWKTVRQSIKRLKDLEQQSQD 123
Query: 182 -------------------ILTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ A+ EA + IP
Sbjct: 124 GTFEKLTKKEALMLQREMDKLENSLGGIKDMGGLPDAIFVIDADHEHIAVTEARNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
VG+VD+N NP+ + Y +PGNDD AIQ Y AI G+++
Sbjct: 184 VGVVDTNSNPDGVDYIIPGNDDAIRAIQLYLDAAANAINSGRES 227
>gi|21242175|ref|NP_641757.1| 30S ribosomal protein S2 [Xanthomonas axonopodis pv. citri str.
306]
gi|294624549|ref|ZP_06703226.1| 30S ribosomal protein S2 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294666403|ref|ZP_06731649.1| 30S ribosomal protein S2 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|390989415|ref|ZP_10259713.1| ribosomal protein S2 [Xanthomonas axonopodis pv. punicae str. LMG
859]
gi|418515720|ref|ZP_13081899.1| 30S ribosomal protein S2 [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
gi|418521725|ref|ZP_13087767.1| 30S ribosomal protein S2 [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|25009201|sp|Q8PMK5.1|RS2_XANAC RecName: Full=30S ribosomal protein S2
gi|21107592|gb|AAM36293.1| 30S ribosomal protein S2 [Xanthomonas axonopodis pv. citri str.
306]
gi|292601155|gb|EFF45215.1| 30S ribosomal protein S2 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292603845|gb|EFF47250.1| 30S ribosomal protein S2 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|372555919|emb|CCF66688.1| ribosomal protein S2 [Xanthomonas axonopodis pv. punicae str. LMG
859]
gi|410702260|gb|EKQ60769.1| 30S ribosomal protein S2 [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|410707629|gb|EKQ66080.1| 30S ribosomal protein S2 [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
Length = 265
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 111/235 (47%), Gaps = 39/235 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+++ L DA+NF++ +A +
Sbjct: 4 VTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSVAQK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G VLF+G I++ A+ C T+ W G TN + ++V RL +L
Sbjct: 64 RGTVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETD 123
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L +L + E N AI EA K+ IP
Sbjct: 124 GTFDKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+ +VD+N +P L+ Y +PGNDD A+Q Y + A+L+GK A ++ + E+
Sbjct: 184 IAVVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNSASVREEE 238
>gi|404476199|ref|YP_006707630.1| 30S ribosomal protein S0 [Brachyspira pilosicoli B2904]
gi|431807060|ref|YP_007233958.1| 30S ribosomal protein S2 [Brachyspira pilosicoli P43/6/78]
gi|404437688|gb|AFR70882.1| 30S ribosomal protein S0 [Brachyspira pilosicoli B2904]
gi|430780419|gb|AGA65703.1| 30S ribosomal protein S2 [Brachyspira pilosicoli P43/6/78]
Length = 271
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 110/232 (47%), Gaps = 40/232 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+L +KD+ +A VH GH+ + +MKP+I+ R I DL ++ ++ A + V ++
Sbjct: 2 SLPAMKDLLEAGVHFGHQTRKWNPKMKPFIFQERNDIHIIDLMKTLTYVKKAYDAVKEMS 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
G +LFVG Q S I++ A+ C + W GM TN + +++ RL +
Sbjct: 62 RNGGNILFVGTKKQASQSIKEAAEKCDMYYVNNRWLGGMLTNFATIKKSIARLKRIEKEE 121
Query: 181 ------------VILTNTLTTVLEPN-----------------------PAIGEAAKMCI 205
VIL LE N A+ EA K+ I
Sbjct: 122 VDGTFDKLPKKEVILLLKEKDKLEKNFAGIKDMENLPDMIFVIDPMQEHIAVSEARKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK-KAKQDTL 256
P V +VD+NCNP LI YP+PGNDD AI + V +AI+ G+ +A ++TL
Sbjct: 182 PVVAVVDTNCNPELIDYPIPGNDDAIRAISLFAGVISSAIIDGQNEAGKETL 233
>gi|410860611|ref|YP_006975845.1| 30S ribosomal protein S2 [Alteromonas macleodii AltDE1]
gi|410817873|gb|AFV84490.1| 30S ribosomal protein S2 [Alteromonas macleodii AltDE1]
Length = 243
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ L +ALN+++ +A +
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNNALNYLSGVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLV----- 181
G +LFVG ++ A C ++ + W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAAGEAVKDAALKCDQYYVNKRWLGGMLTNWKTVRQSIKRLKDLEQQAQD 123
Query: 182 -------------------ILTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ A+ EA + IP
Sbjct: 124 GTFEKLTKKEALMLQREMDKLENSLGGIKDMGGLPDAIFVIDADHEHIAVTEARNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
VG+VD+N NP+ + Y +PGNDD AIQ Y AI G+++
Sbjct: 184 VGVVDTNSNPDGVDYIIPGNDDAIRAIQLYLDAAANAINSGRES 227
>gi|398353387|ref|YP_006398851.1| 30S ribosomal protein S2 [Sinorhizobium fredii USDA 257]
gi|390128713|gb|AFL52094.1| 30S ribosomal protein S2 [Sinorhizobium fredii USDA 257]
Length = 255
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 102/227 (44%), Gaps = 46/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ LL AL V+ G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNVHIIDLAQTVPLLSRALQVVSDTVANGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S +I A+ ++ W GM TN
Sbjct: 68 RVLFVGTKRQASEIIADAAKRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLDEILASEA 127
Query: 167 --------------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL RA+ + PDL+ + +T + AI EA ++ IP
Sbjct: 128 SGFTKKERLNLEREREKLNRALGGIRDMGGTPDLMFIIDTNKESI----AIEEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V ++DSNC+P+ I YP+PGNDD A+ YC + A + G +Q
Sbjct: 184 VVAVIDSNCDPDQIDYPIPGNDDASRAVALYCDLIARAAIDGIARQQ 230
>gi|350427681|ref|XP_003494842.1| PREDICTED: 30S ribosomal protein S2-like [Bombus impatiens]
Length = 237
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 104/224 (46%), Gaps = 39/224 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++DM A VH GH+ + +MKP+I+G R I +L+++ + DAL + IA R G
Sbjct: 1 MRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELNKIAARRG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-------- 180
+LFVG S +++ A++C +F W GM TN + + +++ RL DL
Sbjct: 61 KILFVGTKRAASEAVKQAAENCNQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQANDGT 120
Query: 181 ----------------VILTNTLTTVLE----PNP-----------AIGEAAKMCIPTVG 209
L N+L + P+ AI EA + IP
Sbjct: 121 FDKLTKKEALMRTREMAKLENSLGGIKNMGGLPDAIFVIGADHEHIAIKEANNLGIPVFA 180
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
IVD+N NP+ I Y +PGNDD AIQ Y AI G++ Q
Sbjct: 181 IVDTNSNPDGIDYVIPGNDDAIRAIQLYTTAVSQAISAGREQNQ 224
>gi|325913955|ref|ZP_08176311.1| SSU ribosomal protein S2P [Xanthomonas vesicatoria ATCC 35937]
gi|325539724|gb|EGD11364.1| SSU ribosomal protein S2P [Xanthomonas vesicatoria ATCC 35937]
Length = 266
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 39/233 (16%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ M +A VH GH+ + +M PYI+G R I +L+++ L DA+NF++ IA + G
Sbjct: 1 MRQMLEAGVHFGHRTCYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSIAQKRG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI------ 182
VLF+G I++ A+ C T+ W G TN + ++V RL +L
Sbjct: 61 TVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGT 120
Query: 183 ------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPTVG 209
L +L + E N AI EA K+ IP +
Sbjct: 121 FEKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIA 180
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+VD+N +P L+ Y +PGNDD A+Q Y + A+L+GK A ++ + E+
Sbjct: 181 VVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNSASVREEE 233
>gi|302392363|ref|YP_003828183.1| 30S ribosomal protein S2P [Acetohalobium arabaticum DSM 5501]
gi|302204440|gb|ADL13118.1| SSU ribosomal protein S2P [Acetohalobium arabaticum DSM 5501]
Length = 266
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 108/238 (45%), Gaps = 39/238 (16%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K+M ++ VH GHK + +M+ YI+ R G I DL Q+ +L +A NFV +A
Sbjct: 2 SVVTMKEMLESGVHFGHKTRRWNPKMESYIFTERNGIYIIDLQQTEKLAEEAYNFVRDLA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVIL- 183
+LF Q IE+ A C W GM TN + + + + RL +L +
Sbjct: 62 SEGKQILFASTKKQAQETIEREATRCGMPYVKERWLGGMLTNYQTISKRIDRLEELEQME 121
Query: 184 TNTLTTVL--------------------------------------EPNPAIGEAAKMCI 205
+ L VL A+ EA K+ I
Sbjct: 122 EDGLFEVLPKKEVMELKRERDKLVRFLGGIRDMDGLPDAIFIADPRREEIAVAEANKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQ 263
P V IVD+NC+P+LI Y +PGNDD A++ + A+L+GK+ KQ+ + E Q
Sbjct: 182 PIVAIVDTNCDPDLIDYVIPGNDDAIRAVKLLTGIMADAVLEGKQGKQEQEAEVQEAQ 239
>gi|91761975|ref|ZP_01263940.1| probable 30S ribosomal protein S2 [Candidatus Pelagibacter ubique
HTCC1002]
gi|91717777|gb|EAS84427.1| probable 30S ribosomal protein S2 [Candidatus Pelagibacter ubique
HTCC1002]
Length = 273
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 103/225 (45%), Gaps = 46/225 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VHLGHK + +MK YI+G R I DL Q+ EL AL V + +G
Sbjct: 8 IQQLLEAGVHLGHKTLRWNPKMKKYIFGKRDSIHIIDLTQTLELTNVALEKVYNTIANNG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
+LFV Q S I + A++ ++ W GM TN
Sbjct: 68 KILFVSTKKQASEAIAEVAKETGQYFVNYRWLGGMLTNWGTISGSIKKMKKYEADLVAEN 127
Query: 167 --------------SEKLFRAV------TRLPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
+KL RA+ ++PDLV + +T L AI EA+K+ IP
Sbjct: 128 RGFTKKELLKMSVKKDKLERALGGIAEMKKVPDLVFIIDTNYESL----AIAEASKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
I+DSN NP+ I YP+PGNDD AI YC + K I KKA
Sbjct: 184 ICAILDSNSNPDGIDYPIPGNDDARRAIDLYCNLVKETIENAKKA 228
>gi|144897594|emb|CAM74458.1| 30S ribosomal protein S2 [Magnetospirillum gryphiswaldense MSR-1]
Length = 264
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 107/235 (45%), Gaps = 53/235 (22%)
Query: 61 FQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFV 120
F +R LV +A VH GH + +M P+++G+R G I DL QS +L A+ V
Sbjct: 6 FSMRQLV------EAGVHFGHNTRRWNPKMAPFLFGIRNGIHIIDLQQSVPMLHAAMTAV 59
Query: 121 AHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------- 166
++ G VLFVG S + + A+ C ++ W GM TN
Sbjct: 60 RNVVAGGGRVLFVGTKRAASDTVAEAAKKCGQYYVNHRWLGGMLTNWKTISHSIKRLREL 119
Query: 167 -----------------------SEKLFRA------VTRLPDLVILTNTLTTVLEPNPAI 197
EKL RA + LPD++ + +T L A+
Sbjct: 120 DEMLASGTLAGLTKKEQLVLAREKEKLDRALGGIKDMGGLPDILFIIDTNKEAL----AV 175
Query: 198 GEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
EA K+ IP V I+DSN +P+ + +PVPGNDD AIQ YC + A+L G +A+
Sbjct: 176 QEANKLGIPVVAILDSNSDPSGVQFPVPGNDDAIRAIQTYCDLMVGAVLDGIQAE 230
>gi|302342177|ref|YP_003806706.1| 30S ribosomal protein S2 [Desulfarculus baarsii DSM 2075]
gi|301638790|gb|ADK84112.1| ribosomal protein S2 [Desulfarculus baarsii DSM 2075]
Length = 273
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 47/225 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ + +A VH GH G + +M+ YI+G R G I DL ++ +L RDA + V R
Sbjct: 4 VTMRQLLEAGVHFGHHTGRWNPKMRGYIFGARNGIHIVDLQKTVKLFRDAYDAVVKAVSR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAV------------ 174
G VLFVG Q + ++ + A+ C + W GM TN + + +++
Sbjct: 64 GGDVLFVGTKRQAADIVMEEARRCGMYYVNHRWLGGMLTNFQTIKKSIDRYKWLEGIIAD 123
Query: 175 -------------------------------TRLPDLVILTNTLTTVLEPNPAIGEAAKM 203
TRLP ++ + + + + A+ EA ++
Sbjct: 124 GTIDNYPKKEAIGLRRELEKLELNLGGIKDMTRLPSVIFIVD----IRKERIAVSEAKRL 179
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
IPTV IVD+NC+P+ I Y +PGNDD AI+ C A ++G
Sbjct: 180 GIPTVAIVDTNCDPDNIDYVIPGNDDAIRAIRLMCSKVAEATMEG 224
>gi|148265753|ref|YP_001232459.1| 30S ribosomal protein S2 [Geobacter uraniireducens Rf4]
gi|189044940|sp|A5G7W8.1|RS2_GEOUR RecName: Full=30S ribosomal protein S2
gi|146399253|gb|ABQ27886.1| SSU ribosomal protein S2P [Geobacter uraniireducens Rf4]
Length = 256
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 39/225 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K++ +A VH GH+ + +MKPYI+G R G I DL ++ L + A NFV A
Sbjct: 4 ITMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKGAYNFVVDAAQS 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLP--DLVILT 184
+LFVG Q + + AQ C F W GM TN + +++ RL D ++
Sbjct: 64 GETMLFVGTKKQAQDSVSEEAQRCGMFYVNDRWLGGMLTNFSTVKQSIDRLKRLDAMVAD 123
Query: 185 NTLTT----------------------------------VLEPNP---AIGEAAKMCIPT 207
T+ V++P A+ EA K+ IP
Sbjct: 124 GTIEAYTKKEALQMEKDRQKLEKTLGGIKGMNKLPGVLFVIDPKNEEIAVSEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V IVD+NC+P+ I Y +PGNDD AI+ A+++G +A+
Sbjct: 184 VAIVDTNCDPDDIDYVIPGNDDAIRAIRLLTSKVADAMIEGGQAR 228
>gi|115378600|ref|ZP_01465753.1| ribosomal protein S2 [Stigmatella aurantiaca DW4/3-1]
gi|310823277|ref|YP_003955635.1| 30S ribosomal protein S2 [Stigmatella aurantiaca DW4/3-1]
gi|115364387|gb|EAU63469.1| ribosomal protein S2 [Stigmatella aurantiaca DW4/3-1]
gi|309396349|gb|ADO73808.1| 30S ribosomal protein S2 [Stigmatella aurantiaca DW4/3-1]
Length = 333
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 39/221 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K + +A VH GH+ + +MKPYI+G R G I DL ++ + R A FVA I R
Sbjct: 38 ITMKQLLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVVMARSAFRFVADITSR 97
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
G VLFVG Q +I + A +F T W G TN + + + + RL L ++
Sbjct: 98 GGSVLFVGTKKQAQDVIREEAARAGQFFVTSRWLGGTLTNFKTIKQGIDRLKTLEKMSED 157
Query: 187 LT------------------------------------TVLEPNP---AIGEAAKMCIPT 207
T V++P AI EA ++ IP
Sbjct: 158 GTFERLPKKEVASLEREREKLEKNLGGVKEMAKLPRCVFVIDPKKEHIAIHEATRLGIPV 217
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+G+VD+NC+P+ I + +PGNDD +I+ + A L+G
Sbjct: 218 IGVVDTNCDPDGIDFVIPGNDDAIRSIKLFTSKIADACLEG 258
>gi|21230832|ref|NP_636749.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|25009200|sp|Q8PAV2.1|RS2_XANCP RecName: Full=30S ribosomal protein S2
gi|21112436|gb|AAM40673.1| 30S ribosomal protein S2 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
Length = 275
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 111/235 (47%), Gaps = 39/235 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + ++ PYI+G R I +L+++ L DA+NF++ IA +
Sbjct: 4 VTMRQMLEAGVHFGHQTRYWNPKLAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSIAQK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G VLF+G I++ A+ C T+ W G TN + ++V RL +L
Sbjct: 64 RGTVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETD 123
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L +L + E N AI EA K+ IP
Sbjct: 124 GTFEKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+ +VD+N +P L+ Y +PGNDD A+Q Y + A+L+GK A ++ + E+
Sbjct: 184 IAVVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNSASVREEE 238
>gi|407973250|ref|ZP_11154162.1| 30S ribosomal protein S2 [Nitratireductor indicus C115]
gi|407431091|gb|EKF43763.1| 30S ribosomal protein S2 [Nitratireductor indicus C115]
Length = 259
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 46/234 (19%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++ + +A VH GH+ + +M YI+G R I DL Q+ L+ AL V+ +
Sbjct: 6 ISMRQLLEAGVHFGHQTHRWNPKMANYIFGARNNVHIIDLSQTVPLMHQALKVVSDTVAK 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
G +LFVG Q S ++ A+ ++ W GM TN
Sbjct: 66 GGRILFVGTKRQASDIVADAAKRSAQYYVNARWLGGMLTNWKTISNSIQRLRKLDELLAS 125
Query: 167 ----------------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMC 204
EKL RA+ + PDL+ + +T + A+ EA ++
Sbjct: 126 DAQGFTKKERLNLEREREKLDRALGGIRDMGSTPDLMFVIDTNKEAI----AVQEAKRLG 181
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
IP V IVDSNC+P+++ YP+PGNDD A+ YC + A + G + +Q ++ +
Sbjct: 182 IPVVAIVDSNCDPDVVDYPIPGNDDAARALALYCDLISRAAIDGIERQQGSMGI 235
>gi|333897133|ref|YP_004471007.1| 30S ribosomal protein S2 [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333112398|gb|AEF17335.1| ribosomal protein S2 [Thermoanaerobacterium xylanolyticum LX-11]
Length = 235
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 39/230 (16%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +M PYI+ R G I DL ++ + + +A +F+ +
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKIEEAYDFIKEVV 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVIL- 183
DG VLFVG Q +++ A+ C + + W GM TN + + V RL +L +
Sbjct: 62 SNDGTVLFVGTKKQAQDSVKEEAERCGMYYVNQRWLGGMLTNYKTIRSRVERLKELKKME 121
Query: 184 --------------------------------TNTLTTVL---EPNP---AIGEAAKMCI 205
N+L +VL +P AI EA + I
Sbjct: 122 EDGTFEVLPKKEVIKLRKEKEKLQKYLGGIENMNSLPSVLFVVDPKKEAIAIAEAKNLDI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
P V IVD+NC+P + YP+PGNDD A++ A+++ K+ +Q T
Sbjct: 182 PIVAIVDTNCDPEEVDYPIPGNDDAIRAVKLIASKIADAVIEAKQGEQLT 231
>gi|384260555|ref|YP_005415741.1| 30S ribosomal protein S2 [Rhodospirillum photometricum DSM 122]
gi|378401655|emb|CCG06771.1| 30S ribosomal protein S2 [Rhodospirillum photometricum DSM 122]
Length = 281
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 47/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A H GH + +M PY+YG R I DL Q+ LL ++ V +A G
Sbjct: 26 MRQLIEAGCHFGHNTRRWNPKMAPYLYGQRDNVHIIDLQQTVPLLYRSMQAVRDVAAAGG 85
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
+LFVG Q ++ + A+ C ++ W GM TN + + ++ RL
Sbjct: 86 RILFVGTKRQAQDVVAEHARRCGQYYVNHRWLGGMLTNWKTISHSIKRLRDLEERFAAGD 145
Query: 178 --------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCI 205
PD++ + +T+ L A+ EA K+ +
Sbjct: 146 LQGLTKKEQLNLDRERAKLELALGGIKDMGGLPDMLFIIDTVKESL----AVSEANKLGM 201
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
P V ++DSN +P+ I YP+PGNDD AIQ YC++ AIL G +A+
Sbjct: 202 PVVAVIDSNSDPDGIAYPIPGNDDAIRAIQTYCELMSGAILDGIQAQ 248
>gi|157376293|ref|YP_001474893.1| 30S ribosomal protein S2 [Shewanella sediminis HAW-EB3]
gi|189044994|sp|A8FY42.1|RS2_SHESH RecName: Full=30S ribosomal protein S2
gi|157318667|gb|ABV37765.1| ribosomal protein S2 [Shewanella sediminis HAW-EB3]
Length = 242
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 112/233 (48%), Gaps = 45/233 (19%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R G I +L+ + + +AL F++++A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG S I+++A C++F W GM TN + + +++ RL DL
Sbjct: 64 KGKVLFVGTKRAASEAIKESAISCEQFYVDHRWLGGMLTNWKTVRQSIKRLKDLESQSVD 123
Query: 181 -----------VILTNTLTTVLEP----------------------NPAIGEAAKMCIPT 207
++ T L + + + AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVIFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK------KAKQD 254
V +VD+N +P+ I Y VPGNDD +I+ Y Q A G+ +A+QD
Sbjct: 184 VAVVDTNSSPDGINYIVPGNDDAMRSIRLYTQSVAAAAKAGRGQDLAVQAEQD 236
>gi|159044097|ref|YP_001532891.1| 30S ribosomal protein S2 [Dinoroseobacter shibae DFL 12]
gi|189044937|sp|A8LK91.1|RS2_DINSH RecName: Full=30S ribosomal protein S2
gi|157911857|gb|ABV93290.1| ribosomal protein S2 [Dinoroseobacter shibae DFL 12]
Length = 259
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 100/226 (44%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM PYIYG R G I DL Q+ +L AL V + G
Sbjct: 8 IRQLLEAGVHFGHQTQRWNPRMAPYIYGDRNGIHIMDLTQTVPMLDQALQAVRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q I + A+ C ++ W G TN + + ++ RL
Sbjct: 68 RVLFVGTKRQAQKPIAEAAERCAQYYMNHRWLGGTLTNWKTVSNSIGRLKSIDEAMEGGF 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + V + + AI EA K+ IP
Sbjct: 128 EGLTKKERLGMERDQGKLQASLGGIREMGGVPDLIFVID----VKKEDLAIAEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V +VD+NC+P+ + Y +PGNDD AI YC + A L G A+
Sbjct: 184 VVAVVDTNCSPDGVDYVIPGNDDAARAIALYCDLVARAALDGMSAQ 229
>gi|71083604|ref|YP_266323.1| 30S ribosomal protein S2 [Candidatus Pelagibacter ubique HTCC1062]
gi|71062717|gb|AAZ21720.1| probable 30S ribosomal protein S2 [Candidatus Pelagibacter ubique
HTCC1062]
Length = 273
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 103/225 (45%), Gaps = 46/225 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VHLGHK + +MK YI+G R I DL Q+ EL AL V + +G
Sbjct: 8 IQQLLEAGVHLGHKTLRWNPKMKKYIFGKRDSIHIIDLTQTLELTNVALEKVYNTIANNG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
+LFV Q S I + A++ ++ W GM TN
Sbjct: 68 KILFVSTKKQASEAIAEVAKETGQYFVNYRWLGGMLTNWGTISGSIKKMKKYEADLVAEN 127
Query: 167 --------------SEKLFRAV------TRLPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
+KL RA+ ++PDLV + +T L AI EA+K+ IP
Sbjct: 128 RGFTKKELLKMSVKKDKLERALGGIAEMKKVPDLVFIIDTNYESL----AIAEASKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
I+DSN NP+ I YP+PGNDD AI YC + K I KKA
Sbjct: 184 ICAILDSNSNPDGIDYPIPGNDDARRAIDLYCNLVKETIENAKKA 228
>gi|289522431|ref|ZP_06439285.1| ribosomal protein S2 [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289504267|gb|EFD25431.1| ribosomal protein S2 [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 320
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 106/226 (46%), Gaps = 39/226 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + + VH GH+ D +MKPYI+ R G I DL ++ + A +F+ ++
Sbjct: 40 SVVSMKQLLECGVHFGHQTRRWDPKMKPYIFAERNGIYIIDLQKTVRAIERAYDFLREVS 99
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
G VLFVG Q I++ A+ C +F + W G+ TN L + V R+ +L
Sbjct: 100 KGGGTVLFVGTKRQAQETIKEEAERCGQFYINQRWLGGLLTNFSTLSKRVRRMIELQEME 159
Query: 181 ------------VILTNTLTTVLE------------PNP-----------AIGEAAKMCI 205
VI LE P+ A+ EA K+ I
Sbjct: 160 EKGEFQKYPKKEVIKLRKEKERLEKYLGGIRNMRDLPDALFVIDPRREYIAVAEARKLYI 219
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
P + +VD+NC+P LI +P+PGNDD AI+ + A+++G++
Sbjct: 220 PIISVVDTNCDPTLIDFPIPGNDDAIRAIRLITSLMADAVIEGRQG 265
>gi|406904119|gb|EKD45997.1| hypothetical protein ACD_69C00052G0001 [uncultured bacterium]
Length = 327
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 123/240 (51%), Gaps = 42/240 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH++ + +M PYI+G++ I DL+++ + + A+NF+ +A +
Sbjct: 4 VTMRQMLEAGVHFGHQVRFWNPKMAPYIFGIKSKIHIIDLEKTLPMYKHAVNFLGSVAAK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRF-WRQGMFTNSEKLFRAVTRLPDLVILTN 185
G +LFVG Q L+ A+ C+ + F W GM TN + + +++ RL +L L +
Sbjct: 64 KGKILFVGTKQQARALVRAEAERCR-MPYVDFRWLGGMLTNYKTIRQSLKRLKELEDLRD 122
Query: 186 TLT----------------TVLE------------PNP-----------AIGEAAKMCIP 206
+ T T LE P+ A+ EAAK+ IP
Sbjct: 123 SATFVRLAKKEALSIMREITKLERSLGGIRDMGGLPDALFVLDVGHEKIAVTEAAKLKIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEVQ 266
VGIVD+N P+ I Y +PGNDD+ AI+ Y Q AI+ + + D ++++EK++ +
Sbjct: 183 IVGIVDTNNIPDNIDYIIPGNDDSIRAIKLYLQGVADAIIDARGSIIDE-EVIAEKEDTE 241
>gi|383936726|ref|ZP_09990147.1| small subunit ribosomal protein S2 [Rheinheimera nanhaiensis
E407-8]
gi|383702154|dbj|GAB60238.1| small subunit ribosomal protein S2 [Rheinheimera nanhaiensis
E407-8]
Length = 242
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+Q+ ++ DAL F+ +A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEQTVPMMNDALAFIQQVAAK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S I++ A +F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAIKEAAVKSDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQD 123
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L +L + + AI EA + IP
Sbjct: 124 GTFDKLTKKEALDRTREMDKLEKSLGGIKDMGGLPDVLFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
V IVD+N +P + Y VPGNDD AIQ Y AIL+G+
Sbjct: 184 VAIVDTNSDPKGVDYVVPGNDDAIRAIQLYLGAVGQAILEGR 225
>gi|221632991|ref|YP_002522214.1| 30S ribosomal protein S2 [Thermomicrobium roseum DSM 5159]
gi|221156593|gb|ACM05720.1| ribosomal protein S2 [Thermomicrobium roseum DSM 5159]
Length = 290
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 104/226 (46%), Gaps = 47/226 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K + +A VH GH+ + +M+PYI+G R G I DL Q+ LL +A +F ++A R
Sbjct: 11 VPLKALLEAGVHFGHQSKRWNPKMRPYIFGERNGIHIIDLRQTVRLLAEAESFARNLAAR 70
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
G+ +FVG Q +I A+ C ++ T W G TN
Sbjct: 71 GGVFVFVGTKKQAQEIIRSEAERCGMYSVTERWLGGTLTNFVTIRQRLRYLVQLEEEVRS 130
Query: 167 --------SEKL---------------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKM 203
E++ R +TRLPD + + + + A+ EA ++
Sbjct: 131 PNFAFLPKKEQMRKLRELAKLERTLGGLRGLTRLPDALYVVDPKREAI----AVAEARRL 186
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IP + +VD+NC+P+LI Y +P NDD +I+ AIL G+
Sbjct: 187 GIPIIAMVDTNCDPDLIDYVIPANDDAIRSIRLITSRIADAILAGR 232
>gi|407893660|ref|ZP_11152690.1| 30S ribosomal protein S2 [Diplorickettsia massiliensis 20B]
Length = 294
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 120/249 (48%), Gaps = 42/249 (16%)
Query: 60 YFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNF 119
+ ++ +LV +K++F+A +H GH+ + +M PYIYGVR G I DL+ + + L +AL++
Sbjct: 24 WRKIVSLVTLKELFEAGIHFGHRTRFREPKMSPYIYGVRNGISIIDLEITRKHLIEALDY 83
Query: 120 VAHIAYRDGI-VLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------ 166
VA +A R G ++FVG LI+ A C W G+ TN
Sbjct: 84 VAKLAARPGSKIMFVGTKRAAQDLIKAEAMRCGMPYVNHRWLGGLLTNYRTIRQSIKRLK 143
Query: 167 -------------------------SEKLFRAVTRLPDLVILTNTLTTVLE--PNPAIGE 199
EKL R++ + D+ L + L + N AI E
Sbjct: 144 ELETRSQDGSFAQLTKKEALNLQRQMEKLERSLGGIKDMSGLPDALFVIDRGYENIAIAE 203
Query: 200 AAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAIL--KGKKAKQDTLK 257
A K+ IP + IVD+N +P I Y +PGNDD AI Y ++F IL + K A+ L+
Sbjct: 204 AQKLKIPVISIVDTNHSPEGIDYIIPGNDDAARAIVLYTKLFADTILEARAKAAQAIELE 263
Query: 258 LLSEKQEVQ 266
++EK ++
Sbjct: 264 AIAEKTNLE 272
>gi|285018791|ref|YP_003376502.1| 30S ribosomal protein S2 [Xanthomonas albilineans GPE PC73]
gi|283474009|emb|CBA16510.1| probable 30s ribosomal protein s2 [Xanthomonas albilineans GPE
PC73]
Length = 265
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ +M YI+G R I +L+++ L DA+NF++ IA +
Sbjct: 4 VTMRQMLEAGVHFGHQCRYWHPKMAQYIFGARGKIHIINLEKTVPLFNDAMNFISSIAQK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LF+G +++ A+ C + T+ W G TN + ++V RL +L
Sbjct: 64 RGTILFLGTKRSARDAVKEEAERCGQPFMTQRWLGGTLTNFRTIKQSVARLKELEAAETD 123
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L +L + E N AI EA K+ IP
Sbjct: 124 GTFDKLVKHEVLTMRRERDKLEASLGGIKEMNRLPDALFVIDIGHEDIAIKEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+ +VD+N NP L+ Y +PGNDD A+Q Y + A+L+GK A
Sbjct: 184 IAVVDTNYNPELVDYAIPGNDDAIRAVQLYARAAADAVLEGKAA 227
>gi|419694347|ref|ZP_14222315.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
9872]
gi|380670951|gb|EIB86189.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
9872]
Length = 263
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 48/244 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G + DL ++ R N V A
Sbjct: 1 MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+LFVG Q I++ A+ C W GM TN
Sbjct: 61 EGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEE 120
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + PD++ + +T+ + A+ EA +
Sbjct: 121 DGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVVDTVKEKI----AVQEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK-QDTLKLLSE 261
+ IP V +D+NC+P+L+TYP+PGNDD ++Q +CQ AI +GK + QD L +E
Sbjct: 177 LRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALREQDGEALANE 236
Query: 262 KQEV 265
+QE+
Sbjct: 237 EQEI 240
>gi|83858388|ref|ZP_00951910.1| 30S ribosomal protein S2 [Oceanicaulis sp. HTCC2633]
gi|83853211|gb|EAP91063.1| 30S ribosomal protein S2 [Oceanicaulis sp. HTCC2633]
Length = 279
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 104/230 (45%), Gaps = 40/230 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A H GH+ + +MK YI+G R I DL Q+ +L AL V +A + G
Sbjct: 8 MRQLLEAGCHFGHQTHRWNPKMKEYIFGERANIHIIDLSQTVPMLHQALVKVREVAAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVIL----- 183
VLFVG Q + I + A C ++ W G TN + + +++ RL +L L
Sbjct: 68 RVLFVGTKRQAAEPISQAASRCAQYYMNHRWLGGTLTNWQTISKSIARLRELESLLDAEG 127
Query: 184 --------------------------------TNTLTTVLEPNP---AIGEAAKMCIPTV 208
T L V++ N AI EA ++ IP V
Sbjct: 128 GPTGLTKKEILMLTREREKLERSLGGIKEMGGTPDLMFVIDTNKESIAIQEAKRLGIPVV 187
Query: 209 GIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
+VD+NC+P+ I +P+PGNDD A+ YC + A+L G Q L +
Sbjct: 188 AVVDTNCDPDPIDFPIPGNDDASRALSLYCDLIADAVLDGISDSQAALGM 237
>gi|423205630|ref|ZP_17192186.1| 30S ribosomal protein S2 [Aeromonas veronii AMC34]
gi|404623905|gb|EKB20754.1| 30S ribosomal protein S2 [Aeromonas veronii AMC34]
Length = 242
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 39/223 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MK YI+G R I +L+++ + DA+NF++ +A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKSYIFGARSKVHIINLEKTVPMFDDAMNFISSVAAK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG S +++ A+ C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKVLFVGTKRAASEAVKEAAERCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 181 ----------VILTNTLTTVLEPN-----------------------PAIGEAAKMCIPT 207
++ LE + AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDVLFVVDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
V IVD+N NP+ + Y +PGNDD A+Q Y +L+ ++
Sbjct: 184 VSIVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAAADTVLEARE 226
>gi|390934911|ref|YP_006392416.1| 30S ribosomal protein S2 [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570412|gb|AFK86817.1| ribosomal protein S2 [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 235
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 39/230 (16%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +M PYI+ R G I DL ++ + + +A +F+ +
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKIEEAYDFIKDVV 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVIL- 183
DG VLFVG Q +++ A+ C + + W GM TN + + V RL +L +
Sbjct: 62 SNDGTVLFVGTKKQAQDSVKEEAERCGMYYVNQRWLGGMLTNYKTIRSRVERLKELKKME 121
Query: 184 --------------------------------TNTLTTVL---EPNP---AIGEAAKMCI 205
N+L +VL +P AI EA + I
Sbjct: 122 EDGTFEVLPKKEVIKLRKEKEKLQKYLGGIENMNSLPSVLFVVDPKKEAIAIAEAKNLDI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
P V IVD+NC+P + YP+PGNDD A++ A+++ K+ +Q T
Sbjct: 182 PIVAIVDTNCDPEEVDYPIPGNDDAIRAVKLIASKIADAVIEAKQGEQLT 231
>gi|163750351|ref|ZP_02157591.1| 30S ribosomal protein S2 [Shewanella benthica KT99]
gi|161329841|gb|EDQ00827.1| 30S ribosomal protein S2 [Shewanella benthica KT99]
Length = 242
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 112/233 (48%), Gaps = 45/233 (19%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R G I +L+ + + +AL F+++IA +
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNIASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG S I+++A C ++ W GM TN + + +++ RL DL
Sbjct: 64 KGKVLFVGTKRAASEAIKESAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKDLESQSID 123
Query: 181 -----------VILTNTLTT----------------VL------EPNPAIGEAAKMCIPT 207
++ T L VL + A+ EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELAKLDRSLGGIKNMGGLPDVLFVIGADHEHIAVKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK------KAKQD 254
V IVD+N NP+ I Y +PGNDD +I+ Y + A+ G+ +A+QD
Sbjct: 184 VAIVDTNSNPDGINYIIPGNDDAMRSIRLYTESVAAAVKAGRGQDLAIQAEQD 236
>gi|114327943|ref|YP_745100.1| 30S ribosomal protein S2 [Granulibacter bethesdensis CGDNIH1]
gi|122327094|sp|Q0BSM5.1|RS2_GRABC RecName: Full=30S ribosomal protein S2
gi|114316117|gb|ABI62177.1| SSU ribosomal protein S2P [Granulibacter bethesdensis CGDNIH1]
Length = 258
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 105/223 (47%), Gaps = 40/223 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + RM P+I+GVR I DL Q+ LL +L + + G
Sbjct: 8 LRQLLEAGVHFGHHTRRWNPRMAPFIFGVRNQVHILDLQQTVPLLDRSLRAIRDVVAGGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG + + ++AQ C ++ W GM TN
Sbjct: 68 RVLFVGTKRAAAEYVAESAQRCGQYYVNHRWLGGMLTNWKTITGSIKRLRQIDEMLAGDT 127
Query: 167 --------------SEKLFRAVTRLPDLVILTNTLTTVLEPNP---AIGEAAKMCIPTVG 209
EKL RA+ + D+ L + L +++ N A+ EA K+ IP V
Sbjct: 128 TGLTKKEVLDITRDREKLERALGGIKDMGGLPDIL-FIIDTNKEKLAVEEANKLGIPVVA 186
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
++DSN +P+ +TYP+PGNDD AI YC + +A+L G A+
Sbjct: 187 VLDSNSDPSGVTYPIPGNDDAIRAITMYCDLVASAVLDGISAE 229
>gi|378825809|ref|YP_005188541.1| 30S ribosomal protein S2 [Sinorhizobium fredii HH103]
gi|365178861|emb|CCE95716.1| 30S ribosomal protein S2 [Sinorhizobium fredii HH103]
Length = 255
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 102/227 (44%), Gaps = 46/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ +L AL V+ G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNVHIIDLAQTVPMLSRALQVVSDTVANGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S +I A+ ++ W GM TN
Sbjct: 68 RVLFVGTKRQASEIIADAAKRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLDEILASEA 127
Query: 167 --------------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL RA+ + PDL+ + +T + AI EA ++ IP
Sbjct: 128 SGFTKKERLNLEREREKLNRALGGIRDMGGTPDLMFIIDTNKESI----AIEEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V ++DSNC+P+ I YP+PGNDD A+ YC + A + G +Q
Sbjct: 184 VVAVIDSNCDPDQIDYPIPGNDDASRAVALYCDLIARAAIDGIARQQ 230
>gi|334703603|ref|ZP_08519469.1| 30S ribosomal protein S2 [Aeromonas caviae Ae398]
Length = 242
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 39/223 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MK YI+G R I +L+++ + DA+NF++ +A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKSYIFGARSKVHIINLEKTVPMFDDAMNFISSVAAK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG S +++ A+ C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKVLFVGTKRAASEAVKEAAERCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSED 123
Query: 181 ----------VILTNTLTTVLEPN-----------------------PAIGEAAKMCIPT 207
++ LE + AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDVLFVVDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
V IVD+N NP+ + Y +PGNDD A+Q Y +L+ ++
Sbjct: 184 VSIVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAAADTVLEARE 226
>gi|344206673|ref|YP_004791814.1| 30S ribosomal protein S2 [Stenotrophomonas maltophilia JV3]
gi|343778035|gb|AEM50588.1| ribosomal protein S2 [Stenotrophomonas maltophilia JV3]
Length = 268
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+++ L DA+NF++ +A +
Sbjct: 4 VTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFISSVAQK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G VLF+G I++ A+ C + W G TN + ++V RL +L
Sbjct: 64 RGTVLFLGTKRSARETIKEEAERCGMPFMNQRWLGGTLTNFRTVKQSVARLKELEAGETD 123
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L +L + + N AI EA K+ IP
Sbjct: 124 GTFEKLVKHEVLGLRRERDKLEASLGGIKDMNRLPDAIFVIDIGHEDIAIKEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+ +VD+N NP L+ Y +PGNDD A+Q Y + A+L+GK A
Sbjct: 184 IAVVDTNYNPELVDYAIPGNDDAIRAVQLYARAAADAVLEGKAA 227
>gi|381180832|ref|ZP_09889669.1| SSU ribosomal protein S2P [Treponema saccharophilum DSM 2985]
gi|380767188|gb|EIC01190.1| SSU ribosomal protein S2P [Treponema saccharophilum DSM 2985]
Length = 285
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 100/222 (45%), Gaps = 39/222 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + ++ VH GH++ D RMK YI+ R G I DL ++ ++D+ V I
Sbjct: 3 VVTMKSLLESGVHFGHQVKRWDPRMKKYIFAERNGIHIIDLQKTIAAIKDSYEAVRKIVS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT- 184
VLFVG Q I+K A+ C + W GM TN + +++ RL + +
Sbjct: 63 SGKSVLFVGTKKQAQQAIQKEAERCGMYYVNNRWLGGMLTNFSTIKKSLQRLKKIEKMEV 122
Query: 185 ----NTLT-----------TVLEPN-----------------------PAIGEAAKMCIP 206
+ LT LE N A+ EA +M IP
Sbjct: 123 DGTFDNLTKKEVSSLQKEKAKLEKNLGGVKDMKELPGVIFIIDTHKEQNAVAEALRMKIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
V +VD+NCNP ITYP+PGNDD AI + V A+L+
Sbjct: 183 VVAVVDTNCNPEGITYPIPGNDDAIRAISLFTSVIANAVLEA 224
>gi|150396350|ref|YP_001326817.1| 30S ribosomal protein S2 [Sinorhizobium medicae WSM419]
gi|166226757|sp|A6U8K2.1|RS2_SINMW RecName: Full=30S ribosomal protein S2
gi|150027865|gb|ABR59982.1| ribosomal protein S2 [Sinorhizobium medicae WSM419]
Length = 255
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 102/227 (44%), Gaps = 46/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ +L AL V+ G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNVHIIDLAQTVPMLSRALQVVSDTVASGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S +I A+ ++ W GM TN
Sbjct: 68 RVLFVGTKRQASEIIADAAKRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLDEILASEA 127
Query: 167 --------------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL RA+ + PDL+ + +T + AI EA ++ IP
Sbjct: 128 SGFTKKERLNLEREREKLNRALGGIRDMGGTPDLMFIIDTNKESI----AIEEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V ++DSNC+P+ I YP+PGNDD A+ YC + A + G +Q
Sbjct: 184 VVAVIDSNCDPDQIDYPIPGNDDASRAVALYCDLIARAAIDGIARQQ 230
>gi|440731292|ref|ZP_20911324.1| 30S ribosomal protein S2 [Xanthomonas translucens DAR61454]
gi|440373775|gb|ELQ10520.1| 30S ribosomal protein S2 [Xanthomonas translucens DAR61454]
Length = 265
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 115/237 (48%), Gaps = 43/237 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ +M YI+G R I +L+++ L DA+NF++ +A +
Sbjct: 4 VTMRQMLEAGVHFGHQCRYWHPKMAQYIFGARGKIHIINLEKTVPLFNDAMNFISSVAQK 63
Query: 127 DGIVLFVG--QSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI-- 182
G +LF+G +SA++S +++ A+ C + T+ W G TN + ++V RL +L
Sbjct: 64 RGTILFLGTKRSARDS--VKEEAERCGQPFMTQRWLGGTLTNFRTVKQSVARLKELEAAE 121
Query: 183 ----------------------LTNTLTTVLEPNP---------------AIGEAAKMCI 205
L +L + E N AI EA K+ I
Sbjct: 122 TDGTFDKLVKHEVLTLRREREKLLASLGGIKEMNRLPDALFVIDIGHEDIAIKEAKKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
P V +VD+N NP L+ Y +PGNDD A+Q Y + A+L+GK A + + E+
Sbjct: 182 PVVAVVDTNYNPELVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNAASVREEE 238
>gi|375091578|ref|ZP_09737867.1| 30S ribosomal protein S2 [Helcococcus kunzii ATCC 51366]
gi|374563100|gb|EHR34422.1| 30S ribosomal protein S2 [Helcococcus kunzii ATCC 51366]
Length = 285
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 113/235 (48%), Gaps = 39/235 (16%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +M +I+ R G I DL ++ + + +A + V +A
Sbjct: 2 SVISMKALLEAGVHFGHQTRRWNPKMGKFIFTERNGIYIIDLQKTVKKVDEAYDVVREVA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
G +LFVG Q +E A+ C ++ + W GM TN + + +++ RL D+ ++
Sbjct: 62 AESGNILFVGTKKQAQDAVEFEAKRCDQYYVSHRWLGGMLTNHKTIKKSIQRLEDIKTMS 121
Query: 185 N------------------------------------TLTTVLEP---NPAIGEAAKMCI 205
L V++P N A+ EA K+ I
Sbjct: 122 EDGTFDLLPKKEVINLERELEKLEKFLGGIKDIPALPDLLFVIDPKNENIAVKEARKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLS 260
P VGIVD+NC+P+ + YP+PGNDD A++ A+++G++ + + + S
Sbjct: 182 PIVGIVDTNCDPDDVDYPIPGNDDAIRAVKLITAAMADAVIEGRQGESNDVDAAS 236
>gi|325929601|ref|ZP_08190715.1| SSU ribosomal protein S2P [Xanthomonas perforans 91-118]
gi|325540111|gb|EGD11739.1| SSU ribosomal protein S2P [Xanthomonas perforans 91-118]
Length = 260
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 39/233 (16%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ M +A VH GH+ + +M PYI+G R I +L+++ L DA+NF++ +A + G
Sbjct: 1 MRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSVAQKRG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI------ 182
VLF+G I++ A+ C T+ W G TN + ++V RL +L
Sbjct: 61 TVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGT 120
Query: 183 ------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPTVG 209
L +L + E N AI EA K+ IP +
Sbjct: 121 FDKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIA 180
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+VD+N +P L+ Y +PGNDD A+Q Y + A+L+GK A ++ + E+
Sbjct: 181 VVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNSASVREEE 233
>gi|227821897|ref|YP_002825867.1| 30S ribosomal protein S2 [Sinorhizobium fredii NGR234]
gi|254764486|sp|C3MBQ2.1|RS2_RHISN RecName: Full=30S ribosomal protein S2
gi|227340896|gb|ACP25114.1| 30S ribosomal protein S2 [Sinorhizobium fredii NGR234]
Length = 255
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 102/227 (44%), Gaps = 46/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ +L AL V+ G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNVHIIDLAQTVPMLSRALQVVSDTVANGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S +I A+ ++ W GM TN
Sbjct: 68 RVLFVGTKRQASEIIADAAKRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLDEILASEA 127
Query: 167 --------------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL RA+ + PDL+ + +T + AI EA ++ IP
Sbjct: 128 SGFTKKERLNLEREREKLNRALGGIRDMGGTPDLMFIIDTNKESI----AIEEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V ++DSNC+P+ I YP+PGNDD A+ YC + A + G +Q
Sbjct: 184 VVAVIDSNCDPDQIDYPIPGNDDASRAVALYCDLIARAAIDGIARQQ 230
>gi|121998248|ref|YP_001003035.1| 30S ribosomal protein S2 [Halorhodospira halophila SL1]
gi|166225278|sp|A1WX21.1|RS2_HALHL RecName: Full=30S ribosomal protein S2
gi|121589653|gb|ABM62233.1| SSU ribosomal protein S2P [Halorhodospira halophila SL1]
Length = 247
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 104/224 (46%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ D +M+PYI+G R I +L+++ L +DALNF +A
Sbjct: 4 VSMRQMLEAGVHFGHQTRFWDPKMRPYIFGERNKIHIINLEKTLPLYKDALNFAGRLASN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG L+ + A C W GM TN + ++ RL DL
Sbjct: 64 GGKILFVGTKRPARELVREHAARCGMPYVDHRWLGGMMTNFRTVKHSIARLKDLETQAED 123
Query: 183 --------------------LTNTLTTV--LEPNP-------------AIGEAAKMCIPT 207
L +L+ + +E P AI EA K+ IP
Sbjct: 124 GTFDKVTKREALALSREREKLDRSLSGIKNMERLPDAMFVVDVGYEHIAISEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+G+VD+NC+P + Y +PGNDD AI+ Y A+++ K+A
Sbjct: 184 IGVVDTNCSPREVDYVIPGNDDAIRAIELYVSGIADAVIEAKQA 227
>gi|167037637|ref|YP_001665215.1| 30S ribosomal protein S2 [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|238687715|sp|B0K9R6.1|RS2_THEP3 RecName: Full=30S ribosomal protein S2
gi|166856471|gb|ABY94879.1| ribosomal protein S2 [Thermoanaerobacter pseudethanolicus ATCC
33223]
Length = 235
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 39/228 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +M PYI+ R G I DL Q+ E L A FV +A
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKKLA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
G +LFVG Q I++ A+ C F + W G TN + + + RL +L +
Sbjct: 62 MEGGTILFVGTKKQAQDSIKEEAERCGMFYVNQRWLGGTLTNFKTIRGRIQRLKELKKME 121
Query: 185 NTLT------------------------------------TVLEPNP---AIGEAAKMCI 205
T +++P A+ EA + I
Sbjct: 122 EDGTFDVLPKKEVIKLRKEKERLQKFLGGIENMESLPSALFIVDPKKEAIAVAEARSLEI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P V IVD+NC+P LI YP+PGNDD A++ A+++G + +Q
Sbjct: 182 PIVAIVDTNCDPELIDYPIPGNDDAIRAVKLITSKIADAVIEGNQGEQ 229
>gi|254525018|ref|ZP_05137073.1| ribosomal protein S2 [Stenotrophomonas sp. SKA14]
gi|219722609|gb|EED41134.1| ribosomal protein S2 [Stenotrophomonas sp. SKA14]
Length = 268
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+++ L DA+NF++ +A +
Sbjct: 4 VTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFISSVAQK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G VLF+G I++ A+ C + W G TN + ++V RL +L
Sbjct: 64 RGTVLFLGTKRSARETIKEEAERCGMPFMNQRWLGGTLTNFRTVKQSVARLKELEAGETD 123
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L +L + + N AI EA K+ IP
Sbjct: 124 GTFEKLVKHEVLGLRRERDKLEASLGGIKDMNRLPDAIFVIDIGHEDIAIKEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+ +VD+N NP L+ Y +PGNDD A+Q Y + A+L+GK A
Sbjct: 184 IAVVDTNYNPELVDYAIPGNDDAIRAVQLYARAAADAVLEGKAA 227
>gi|226697647|sp|B8CQ85.1|RS2_SHEPW RecName: Full=30S ribosomal protein S2
gi|212557761|gb|ACJ30215.1| Ribosomal protein S2 [Shewanella piezotolerans WP3]
Length = 242
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 111/233 (47%), Gaps = 45/233 (19%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R G I +L+ + + +AL F+++IA +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNIASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG S I++ A C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKVLFVGTKRAASEAIKEAAVSCDQFYVDHRWLGGMLTNWKTVRQSIKRLKDLESQSID 123
Query: 181 -----------VILTNTLTTVLEP----------------------NPAIGEAAKMCIPT 207
++ T L + + + AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELEKLEKSLGGIKNMAGLPDVIFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK------KAKQD 254
V +VD+N +P+ I Y +PGNDD +I+ Y + TA G+ +A+QD
Sbjct: 184 VAVVDTNSSPDGINYIIPGNDDAMRSIRLYTESVATAAKAGRNQDLAVQAEQD 236
>gi|147677587|ref|YP_001211802.1| 30S ribosomal protein S2 [Pelotomaculum thermopropionicum SI]
gi|189044947|sp|A5D2T5.1|RS2_PELTS RecName: Full=30S ribosomal protein S2
gi|146273684|dbj|BAF59433.1| ribosomal protein S2 [Pelotomaculum thermopropionicum SI]
Length = 232
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 39/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M PYI+ R G I DL ++ + + +A NF+ +A
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTVKKVEEAYNFIKQLAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
VLFVG Q +++ A+ C F + W GM TN + + R + RL +L +
Sbjct: 63 EGETVLFVGTKKQAQEAVQEEAERCGMFYVNQRWLGGMLTNFQTIRRRIDRLQELEKMEE 122
Query: 186 TLTT------------------------------------VLEPNP---AIGEAAKMCIP 206
+ V++P A+ EA K+ IP
Sbjct: 123 NGSLEVLPKKEVAELMHEKEKLQKFLGGIKEMRRLPGALFVIDPRKERIAVAEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V IVD+NC+P+ + Y +PGNDD A++ A+L+GK+ +Q
Sbjct: 183 IVAIVDTNCDPDEVDYVIPGNDDAIRAVRLLTAKMADAVLEGKQGEQ 229
>gi|392382122|ref|YP_005031319.1| 30S ribosomal subunit protein S2 [Azospirillum brasilense Sp245]
gi|356877087|emb|CCC97888.1| 30S ribosomal subunit protein S2 [Azospirillum brasilense Sp245]
Length = 254
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + +M PYI+GVR G I DL+Q+ L AL V + G
Sbjct: 1 MRQLLEAGVHFGHHTRRWNPKMGPYIFGVRNGVHIIDLEQTVPALHRALQAVRDVVAGGG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR------------ 176
VLFVG Q + + A C ++ W GM TN + + +++ R
Sbjct: 61 RVLFVGTKRQAQEKVAEAASKCGQYYVNHRWLGGMLTNWKTISQSIKRLREMEERLGGDT 120
Query: 177 ------------------------------LPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
LPD++ + +T + A+ EA K+ IP
Sbjct: 121 SGLTKREILELTRERDKLERALGGIKEMGGLPDVLFIIDTNKESI----AVKEANKLGIP 176
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
+ ++DSN +P+ + +P+PGNDD AI YC++ A+L G +A+
Sbjct: 177 VIAVIDSNSDPDGVAFPIPGNDDALRAIDLYCELVNGAVLDGLQAE 222
>gi|381171141|ref|ZP_09880290.1| ribosomal protein S2 [Xanthomonas citri pv. mangiferaeindicae LMG
941]
gi|380688365|emb|CCG36777.1| ribosomal protein S2 [Xanthomonas citri pv. mangiferaeindicae LMG
941]
Length = 260
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 39/233 (16%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ M +A VH GH+ + +M PYI+G R I +L+++ L DA+NF++ +A + G
Sbjct: 1 MRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFLSSVAQKRG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI------ 182
VLF+G I++ A+ C T+ W G TN + ++V RL +L
Sbjct: 61 TVLFLGTKRSARESIKEEAERCNMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGT 120
Query: 183 ------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPTVG 209
L +L + E N AI EA K+ IP +
Sbjct: 121 FDKLVKHEVLGLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIA 180
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+VD+N +P L+ Y +PGNDD A+Q Y + A+L+GK A ++ + E+
Sbjct: 181 VVDTNYDPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNSASVREEE 233
>gi|117621095|ref|YP_855714.1| 30S ribosomal protein S2 [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|330830755|ref|YP_004393707.1| 30S ribosomal protein S2 [Aeromonas veronii B565]
gi|406675998|ref|ZP_11083184.1| 30S ribosomal protein S2 [Aeromonas veronii AMC35]
gi|411010339|ref|ZP_11386668.1| 30S ribosomal protein S2 [Aeromonas aquariorum AAK1]
gi|423197730|ref|ZP_17184313.1| 30S ribosomal protein S2 [Aeromonas hydrophila SSU]
gi|423202613|ref|ZP_17189192.1| 30S ribosomal protein S2 [Aeromonas veronii AER39]
gi|423208572|ref|ZP_17195126.1| 30S ribosomal protein S2 [Aeromonas veronii AER397]
gi|166225235|sp|A0KHG3.1|RS2_AERHH RecName: Full=30S ribosomal protein S2
gi|117562502|gb|ABK39450.1| ribosomal protein S2 [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|328805891|gb|AEB51090.1| 30S ribosomal protein S2 [Aeromonas veronii B565]
gi|404614809|gb|EKB11788.1| 30S ribosomal protein S2 [Aeromonas veronii AER39]
gi|404618417|gb|EKB15337.1| 30S ribosomal protein S2 [Aeromonas veronii AER397]
gi|404626221|gb|EKB23031.1| 30S ribosomal protein S2 [Aeromonas veronii AMC35]
gi|404631418|gb|EKB28054.1| 30S ribosomal protein S2 [Aeromonas hydrophila SSU]
Length = 242
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MK YI+G R I +L+++ + DA+NF++ +A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKSYIFGARSKVHIINLEKTVPMFDDAMNFISSVAAK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG S +++ A+ C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKVLFVGTKRAASEAVKEAAERCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 181 ----------VILTNTLTTVLEPN-----------------------PAIGEAAKMCIPT 207
++ LE + AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTREMEKLEKSLGGIKNMGGLPDVLFVVDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
V IVD+N NP+ + Y +PGNDD A+Q Y +L+ +
Sbjct: 184 VSIVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAAADTVLEAR 225
>gi|352086338|ref|ZP_08953879.1| ribosomal protein S2 [Rhodanobacter sp. 2APBS1]
gi|389798395|ref|ZP_10201412.1| 30S ribosomal protein S2 [Rhodanobacter sp. 116-2]
gi|351679637|gb|EHA62774.1| ribosomal protein S2 [Rhodanobacter sp. 2APBS1]
gi|388445003|gb|EIM01091.1| 30S ribosomal protein S2 [Rhodanobacter sp. 116-2]
Length = 290
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 109/223 (48%), Gaps = 41/223 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+++ L DA+NF++ +A +
Sbjct: 4 VTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTLPLFTDAMNFLSGLAQK 63
Query: 127 DGIVLFVG-QSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI--- 182
G VLFVG + + L E+ A+ F +R W GM TN + ++V+RL +L
Sbjct: 64 RGTVLFVGTKRSAREPLAEEAARAGMPFVTSR-WLGGMLTNFRTVKQSVSRLKELEAAET 122
Query: 183 ---------------------LTNTLTTVLEPNP---------------AIGEAAKMCIP 206
L +L + + N A+ EA K+ IP
Sbjct: 123 DGSFEKLVKHEVLARRRERDKLQASLGGIKDMNRLPDALFVIDIGHEDIAVQEAKKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+ +VD+N NP L+ Y +PGNDD AIQ Y + +IL+GK
Sbjct: 183 VIAVVDTNYNPELVDYAIPGNDDAIRAIQLYARAAADSILEGK 225
>gi|308048669|ref|YP_003912235.1| 30S ribosomal protein S2P [Ferrimonas balearica DSM 9799]
gi|307630859|gb|ADN75161.1| SSU ribosomal protein S2P [Ferrimonas balearica DSM 9799]
Length = 242
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 104/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+ + ++ +AL ++ +A +
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEHTVPMMNEALAYLGGVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
+G VLFVG + + AQ C +F W GM TN + + +++ RL DL
Sbjct: 64 NGKVLFVGTKRAAGQAVREAAQSCDQFYVDNRWLGGMLTNWKTVRQSIKRLKDLEAQAQD 123
Query: 181 ------------------VILTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L +L + + P+ AI EA + IP
Sbjct: 124 GTFEKLTKKEALMRSREMAKLEKSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
V IVD+N NP+ + Y VPGNDD AIQ Y A+ +G+
Sbjct: 184 VAIVDTNTNPDGVDYIVPGNDDAIRAIQLYTGAVAQAVKEGR 225
>gi|384917994|ref|ZP_10018092.1| 30S ribosomal protein S2 [Citreicella sp. 357]
gi|384468107|gb|EIE52554.1| 30S ribosomal protein S2 [Citreicella sp. 357]
Length = 254
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 100/229 (43%), Gaps = 46/229 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM +IYG R G I DL Q+ +L ALN + R G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMGEFIYGARNGIHIMDLTQTVPMLDAALNAIRDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q + I + A+ C ++ W G TN + + +++ RL
Sbjct: 68 RVLFVGTKRQAAQPIAEAAEKCAQYYMNHRWLGGTLTNWQTVSKSIQRLKTIDEQMDAGA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PD++ + + L AI EA K+ IP
Sbjct: 128 EGLTKKERLHMERDQSKLQASLGGIRDMGGVPDMLFVIDVKKEAL----AILEAKKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V IVD+NC+P+ I Y +PGNDD AI YC + A L G + +
Sbjct: 184 VVAIVDTNCSPDGIDYIIPGNDDAARAIALYCDLVSRAALDGMTGQMEA 232
>gi|260433686|ref|ZP_05787657.1| ribosomal protein S2 [Silicibacter lacuscaerulensis ITI-1157]
gi|260417514|gb|EEX10773.1| ribosomal protein S2 [Silicibacter lacuscaerulensis ITI-1157]
Length = 259
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 99/226 (43%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM PYIYG R G I DL Q+ +L AL + + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMAPYIYGARNGIHIIDLTQTVPMLDQALQVIRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S I + A+ ++ W G TN + + +++ RL
Sbjct: 68 RVLFVGTKRQASGPIAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSIQRLNQIDEAMQSGA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + L AI EA K+ IP
Sbjct: 128 EGLTKKERLGMERDQAKLQASLGGIREMGGVPDLLFVIDVKKEAL----AIAEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V +VD+NC+P+ + Y +PGNDD AI YC + A L G A+
Sbjct: 184 VVAVVDTNCSPDGVDYVIPGNDDAARAIALYCDLAARAALDGMSAQ 229
>gi|190573503|ref|YP_001971348.1| 30S ribosomal protein S2 [Stenotrophomonas maltophilia K279a]
gi|386717753|ref|YP_006184079.1| 30S ribosomal protein S2 [Stenotrophomonas maltophilia D457]
gi|408824918|ref|ZP_11209808.1| 30S ribosomal protein S2 [Pseudomonas geniculata N1]
gi|424667771|ref|ZP_18104796.1| 30S ribosomal protein S2 [Stenotrophomonas maltophilia Ab55555]
gi|229559896|sp|B2FIA9.1|RS2_STRMK RecName: Full=30S ribosomal protein S2
gi|190011425|emb|CAQ45043.1| putative 30S ribosomal protein S2 [Stenotrophomonas maltophilia
K279a]
gi|384077315|emb|CCH11901.1| SSU ribosomal protein S2p (SAe) [Stenotrophomonas maltophilia D457]
gi|401068033|gb|EJP76557.1| 30S ribosomal protein S2 [Stenotrophomonas maltophilia Ab55555]
gi|456733857|gb|EMF58679.1| SSU ribosomal protein S2p (SAe) [Stenotrophomonas maltophilia EPM1]
Length = 268
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+++ L DA+NF++ +A +
Sbjct: 4 VTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFISSVAQK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G VLF+G I++ A+ C + W G TN + ++V RL +L
Sbjct: 64 RGTVLFLGTKRSARETIKEEAERCGMPFMNQRWLGGTLTNFRTVKQSVARLKELEAGETD 123
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L +L + + N AI EA K+ IP
Sbjct: 124 GTFEKLVKHEVLGLRRERDKLEASLGGIKDMNRLPDAIFVIDIGHEDIAIKEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+ +VD+N NP L+ Y +PGNDD A+Q Y + A+L+GK A
Sbjct: 184 IAVVDTNYNPELVDYAIPGNDDAIRAVQLYARAAADAVLEGKAA 227
>gi|58426194|gb|AAW75231.1| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzae KACC 10331]
Length = 375
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 109/235 (46%), Gaps = 39/235 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ M YI+G R I +L+++ L DA+N+++ IA +
Sbjct: 112 VTMRQMLEAGVHFGHQCRYWHPNMAQYIFGARGKIHIINLEKTVPLFNDAMNYLSSIAQK 171
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LF+G I++ A+ C T+ W G TN + ++V RL +L
Sbjct: 172 RGTILFLGTKRSARASIKEEAERCGMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETD 231
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L +L + E N AI EA K+ IP
Sbjct: 232 GTFDKLVKHEVLSLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPV 291
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+ +VD+N NPNL+ Y +PGNDD A+Q Y + A+L+GK A ++ + E+
Sbjct: 292 IAVVDTNYNPNLVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNSASVREEE 346
>gi|167040298|ref|YP_001663283.1| 30S ribosomal protein S2 [Thermoanaerobacter sp. X514]
gi|307724382|ref|YP_003904133.1| 30S ribosomal protein S2 [Thermoanaerobacter sp. X513]
gi|326389451|ref|ZP_08211018.1| ribosomal protein S2 [Thermoanaerobacter ethanolicus JW 200]
gi|238687581|sp|B0K1P9.1|RS2_THEPX RecName: Full=30S ribosomal protein S2
gi|166854538|gb|ABY92947.1| ribosomal protein S2 [Thermoanaerobacter sp. X514]
gi|307581443|gb|ADN54842.1| ribosomal protein S2 [Thermoanaerobacter sp. X513]
gi|325994456|gb|EGD52881.1| ribosomal protein S2 [Thermoanaerobacter ethanolicus JW 200]
Length = 235
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 39/228 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +M PYI+ R G I DL Q+ E L A FV +A
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKKLA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
G +LFVG Q I++ A+ C F + W G TN + + + RL +L +
Sbjct: 62 MEGGTILFVGTKKQAQDSIKEEAERCGMFYVNQRWLGGTLTNFKTIRGRIQRLKELKKME 121
Query: 185 NTLT------------------------------------TVLEPNP---AIGEAAKMCI 205
T +++P A+ EA + I
Sbjct: 122 EDGTFDVLPKKEVIKLRKEKERLQKFLGGIENMQSLPSALFIVDPKKEAIAVAEARSLEI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P V IVD+NC+P LI YP+PGNDD A++ A+++G + +Q
Sbjct: 182 PIVAIVDTNCDPELIDYPIPGNDDAIRAVKLITSKIADAVIEGNQGEQ 229
>gi|392548406|ref|ZP_10295543.1| 30S ribosomal protein S2 [Pseudoalteromonas rubra ATCC 29570]
Length = 242
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + DAL F++++A
Sbjct: 4 VSMRDMLQAGVHFGHQARYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALKFLSNVASN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A ++F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVKEAAIQSEQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L +L + + P+ AI EA + IP
Sbjct: 124 GTFEKLTKKEALMKTREMEKLEKSLGGIKDMGGLPDAIFIIDADHEHIAIREANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V +VD+N NP+ + Y +PGNDD AIQ Y TAI +G+++
Sbjct: 184 VSVVDTNSNPDGVDYIIPGNDDAIRAIQLYTGAVATAITEGRES 227
>gi|403066533|ref|YP_006639022.1| 30S ribosomal protein S2 (chloroplast) [Saccharina japonica]
gi|378787446|gb|AFC40076.1| 30S ribosomal protein S2 (chloroplast) [Saccharina japonica]
Length = 231
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 109/235 (46%), Gaps = 50/235 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+++ + DA VH GHK + +M PYIY R G I DL Q+ E L+ A +F + +
Sbjct: 4 IELAQLLDAGVHFGHKAHRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKKASAK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN----------------SEKL 170
+ LFVG Q S LI AQ C F W GM TN EKL
Sbjct: 64 NQTFLFVGTKKQASSLIAIEAQKCGAFYVNHRWLGGMLTNWVTIKGRIDRLNQLEEQEKL 123
Query: 171 ---------------------------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKM 203
+ + ++PD++++ + ++ AI EA +
Sbjct: 124 NSFNNLPKKEASNLKKELEKLKKYFNGVKGMKKIPDILVIIDQKREII----AIQEALSL 179
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
IP + I+D+NC+PNL T P+PGNDD+ +I+Y + +I G +Q++LK+
Sbjct: 180 DIPIISILDTNCDPNLATIPIPGNDDSIRSIKYIIKNIADSICLG---QQNSLKI 231
>gi|407791703|ref|ZP_11138783.1| 30S ribosomal protein S2 [Gallaecimonas xiamenensis 3-C-1]
gi|407199180|gb|EKE69201.1| 30S ribosomal protein S2 [Gallaecimonas xiamenensis 3-C-1]
Length = 240
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 102/224 (45%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+Q+ + DALN+++ +A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEQTLPMFHDALNYLSSVAGK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
G VLFVG S ++ A C ++ W GM TN + + +++ RL DL +
Sbjct: 64 KGKVLFVGTKRAASEAVKDAANSCGQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 186 ------------TLTTVLE--------------------------PNPAIGEAAKMCIPT 207
LT +E + AI EA + IP
Sbjct: 124 GTFDKLTKKEALDLTREMEKLEKSLGGIKDMGGLPDVLFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V IVD+N NP+ + Y VPGNDD AIQ Y + K A
Sbjct: 184 VSIVDTNSNPDGVDYVVPGNDDAIRAIQLYVGAVAATVNDAKGA 227
>gi|436842896|ref|YP_007327274.1| ribosomal protein S2 [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432171802|emb|CCO25175.1| ribosomal protein S2 [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 253
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 108/235 (45%), Gaps = 39/235 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K M + VH GH+ + +M+PYI+G R G I DL Q+ +L R A +F+A +
Sbjct: 4 VTMKQMLETGVHFGHQTRRWNPKMRPYIFGARNGIHIMDLQQTVKLFRTAHDFIADAVAQ 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLF+G Q I A F T W G TN + + R + RL L
Sbjct: 64 GGKVLFIGTKRQAQESIAAEASRAGMFHVTHRWMGGTLTNFQTIKRRIDRLKKLEEMFED 123
Query: 181 ----------VILTN--------------------TLTTVLEPNP---AIGEAAKMCIPT 207
+++ ++ V++P AI E K+ IP
Sbjct: 124 GSIKRFPKKEIVMMGREVKKLTLALGGIKDLHGAPSVAFVIDPKREQIAIQECRKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
V +VDSNC+P+++ + +PGNDD AI+ + A L+G +++ ++ +EK
Sbjct: 184 VAVVDSNCDPDMVDFIIPGNDDAIRAIKLFATHMADACLEGAARRKEDKEMEAEK 238
>gi|194365044|ref|YP_002027654.1| 30S ribosomal protein S2 [Stenotrophomonas maltophilia R551-3]
gi|238693464|sp|B4SQ23.1|RS2_STRM5 RecName: Full=30S ribosomal protein S2
gi|194347848|gb|ACF50971.1| ribosomal protein S2 [Stenotrophomonas maltophilia R551-3]
Length = 267
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+++ L DA+NF++ +A +
Sbjct: 4 VTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFISSVAQK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G VLF+G I++ A+ C + W G TN + ++V RL +L
Sbjct: 64 RGTVLFLGTKRSARETIKEEAERCGMPFMNQRWLGGTLTNFRTVKQSVARLKELEAGETD 123
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L +L + + N AI EA K+ IP
Sbjct: 124 GTFEKLVKHEVLGLRRERDKLEASLGGIKDMNRLPDAIFVIDIGHEDIAIKEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+ +VD+N NP L+ Y +PGNDD A+Q Y + A+L+GK A
Sbjct: 184 IAVVDTNYNPELVDYAIPGNDDAIRAVQLYSRAAADAVLEGKAA 227
>gi|345017718|ref|YP_004820071.1| 30S ribosomal protein S2 [Thermoanaerobacter wiegelii Rt8.B1]
gi|392940938|ref|ZP_10306582.1| ribosomal protein S2 [Thermoanaerobacter siderophilus SR4]
gi|344033061|gb|AEM78787.1| ribosomal protein S2 [Thermoanaerobacter wiegelii Rt8.B1]
gi|392292688|gb|EIW01132.1| ribosomal protein S2 [Thermoanaerobacter siderophilus SR4]
Length = 261
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 39/228 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +M PYI+ R G I DL Q+ E L A FV +A
Sbjct: 28 SVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKKLA 87
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
G +LFVG Q I++ A+ C F + W G TN + + + RL +L +
Sbjct: 88 MEGGTILFVGTKKQAQDSIKEEAERCGMFYVNQRWLGGTLTNFKTIRGRIQRLKELKKME 147
Query: 185 NTLT------------------------------------TVLEPNP---AIGEAAKMCI 205
T +++P A+ EA + I
Sbjct: 148 EDGTFDVLPKKEVIKLRKEKERLQKFLGGIENMQSLPSALFIVDPKKEAIAVAEARSLEI 207
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P V IVD+NC+P LI YP+PGNDD A++ A+++G + +Q
Sbjct: 208 PIVAIVDTNCDPELIDYPIPGNDDAIRAVKLITSKIADAVIEGNQGEQ 255
>gi|254455660|ref|ZP_05069089.1| ribosomal protein S2 [Candidatus Pelagibacter sp. HTCC7211]
gi|207082662|gb|EDZ60088.1| ribosomal protein S2 [Candidatus Pelagibacter sp. HTCC7211]
Length = 272
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 102/221 (46%), Gaps = 46/221 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++ + +A VHLGHK + +MK YI+G R I DL Q+ EL + AL V +I
Sbjct: 6 ITIQQLLEAGVHLGHKTLRWNPKMKKYIFGKRDSIHIIDLTQTLELTKVALEKVYNIIAN 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
+G +LFV Q S I + A++ ++ W GM TN
Sbjct: 66 NGKILFVSTKKQASEAIAEVAKETDQYFVNYRWLGGMLTNWGTISGSIKKMKKYETALAA 125
Query: 167 ----------------SEKLFRA------VTRLPDLVILTNTLTTVLEPNPAIGEAAKMC 204
+KL R+ + + PDLV + +T L AI E+ K+
Sbjct: 126 ENRGFTKKELLKMSVKKDKLERSLGGIAEMKKTPDLVFIIDTNYESL----AIAESVKLG 181
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAI 245
IP + I+DSN NP+ I YP+PGNDD AI YC + K I
Sbjct: 182 IPIIAILDSNSNPDNIDYPIPGNDDARRAIDLYCNLIKETI 222
>gi|294649929|ref|ZP_06727321.1| 30S ribosomal protein S2 [Acinetobacter haemolyticus ATCC 19194]
gi|292824158|gb|EFF82969.1| 30S ribosomal protein S2 [Acinetobacter haemolyticus ATCC 19194]
Length = 282
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 121/272 (44%), Gaps = 52/272 (19%)
Query: 25 LSTVPNVDPLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNL----VKVKDMFDAKVHLG 80
+S+V D + + E+ D + PNP F+V+ + V ++D+ A H G
Sbjct: 1 MSSVATTDKVTAIPWVENADIWR----PNP-----NFKVKKMADYNVSMRDLLQAGAHFG 51
Query: 81 HKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNS 140
H+ + +M+ YI+G R I +L+ + L DALNFV ++A + VLFVG S
Sbjct: 52 HQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFVNNLASKKNKVLFVGTKRAAS 111
Query: 141 LLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN-------TLTTVLE- 192
+I + AQ + W GM TN + L +++ RL DL + T LE
Sbjct: 112 NIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQDGTFAKLTKREALER 171
Query: 193 --------------------PNP-----------AIGEAAKMCIPTVGIVDSNCNPNLIT 221
P+ AI EA + IP +GIVD+N NP+ +
Sbjct: 172 TREMEKLERALGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPVIGIVDTNSNPDNVD 231
Query: 222 YPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
Y +PGNDD A+ Y AIL GK+ Q
Sbjct: 232 YVIPGNDDAIRAVTLYASAMADAILAGKEYAQ 263
>gi|404496110|ref|YP_006720216.1| 30S ribosomal protein S2 [Geobacter metallireducens GS-15]
gi|418065467|ref|ZP_12702840.1| ribosomal protein S2 [Geobacter metallireducens RCH3]
gi|123756464|sp|Q39W88.1|RS2_GEOMG RecName: Full=30S ribosomal protein S2
gi|78193719|gb|ABB31486.1| ribosomal protein S2 [Geobacter metallireducens GS-15]
gi|373562207|gb|EHP88424.1| ribosomal protein S2 [Geobacter metallireducens RCH3]
Length = 251
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 106/230 (46%), Gaps = 39/230 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K++ +A VH GH+ + +MKPYI+G R G I DL ++ L ++A +FV A
Sbjct: 4 VTMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKNAYSFVRECAQS 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLP--DLVILT 184
+LFVG Q I + A C + + W GM TN + +++ RL D +
Sbjct: 64 GETILFVGTKKQAQDAIGEEASRCNMYYVNQRWLGGMLTNFATVKQSIDRLKRLDAMFAD 123
Query: 185 NTLTT----------------------------------VLEPNP---AIGEAAKMCIPT 207
T+ V++P AI EA K+ IP
Sbjct: 124 GTVEAYTKKEALQLEKERQKLEKTLGGIKGMGKVPGALFVIDPKNETIAINEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLK 257
V +VD+NC+P+ I Y +PGNDD AI+ A+L+G +A+ L+
Sbjct: 184 VAVVDTNCDPDPIDYVIPGNDDAIRAIRLLTSKMADAVLEGAQARDAQLQ 233
>gi|257458511|ref|ZP_05623648.1| ribosomal protein S2 [Treponema vincentii ATCC 35580]
gi|257444108|gb|EEV19214.1| ribosomal protein S2 [Treponema vincentii ATCC 35580]
Length = 294
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K++ ++ VH GH++ D RMK YI+ R G I DL ++ +R+A + V
Sbjct: 3 VVTMKNLLESGVHFGHQVKRWDPRMKKYIFAERNGIHIIDLQKTITAIREAYDAVRKTTA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
VLFVG Q I K A+ C F W GM TN + +++ RL + + N
Sbjct: 63 AGKSVLFVGTKKQVQQTIAKEAERCGMFYVNNRWLGGMLTNFSTIKKSLARLKKIEKMEN 122
Query: 186 TLT----------------TVLEPN-----------------------PAIGEAAKMCIP 206
T LE N AI EA +M IP
Sbjct: 123 DGTFDSLTKKEVAVLQKEKAKLEKNLGGIKEMKELPGIIFIIDTRKETIAISEARRMGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILK 247
V +VD+NCNP I YP+PGNDD +I + Q+ A+++
Sbjct: 183 IVAVVDTNCNPEGIDYPIPGNDDAIRSISLFTQIIANAVIE 223
>gi|399090307|ref|ZP_10754008.1| ribosomal protein S2 [Caulobacter sp. AP07]
gi|398027936|gb|EJL21462.1| ribosomal protein S2 [Caulobacter sp. AP07]
Length = 306
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 100/227 (44%), Gaps = 46/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A H GH+ + +M YI+G R I DL QS LL AL V +A G
Sbjct: 8 MRQLLEAGAHFGHQTHRWNPKMDRYIFGSRSNIHIIDLSQSIPLLHQALVKVREVAAAGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S + A+ C ++ W G TN + ++ RL
Sbjct: 68 RVLFVGTKRQASDPVATAAKRCAQYYVNHRWLGGTLTNWRTVSGSIARLRELEGVLGGEG 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PD++ + +T + AI EA K+ IP
Sbjct: 128 AGRSKKELLQLTRERDKLELSLGGIKDMGGIPDIMFVIDTNKEAI----AILEARKLNIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V I+D+NC+P+ ITYP+PGNDD A+Q YC + A+L G A Q
Sbjct: 184 VVAILDTNCDPDGITYPIPGNDDAARALQLYCDLIADAVLDGLAAGQ 230
>gi|405354504|ref|ZP_11023865.1| SSU ribosomal protein S2p (SAe) [Chondromyces apiculatus DSM 436]
gi|397092219|gb|EJJ22993.1| SSU ribosomal protein S2p (SAe) [Myxococcus sp. (contaminant ex DSM
436)]
Length = 324
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 101/221 (45%), Gaps = 39/221 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++ + +A VH GH+ + +MKPYI+G R G I DL ++ + R A FVA I R
Sbjct: 19 ITMRQLLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVVMARSAFRFVADITAR 78
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG Q +I + A +F T W G TN + + + + RL L
Sbjct: 79 GGSVLFVGTKKQAQDVIREEASRAGQFFVTSRWLGGTLTNFKTIKQGIDRLKGLEKMAED 138
Query: 181 ----------VILTNTLTTVLEPN-----------------------PAIGEAAKMCIPT 207
V L LE N AI EA+++ IP
Sbjct: 139 GTFDRLPKKEVALLEREREKLEKNLGGVKEMSKLPRCVFVIDPKKEHIAIHEASRLGIPV 198
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+G+VD+NC+P+ I + +PGNDD +I+ + A ++G
Sbjct: 199 IGLVDTNCDPDGIDFVIPGNDDAIRSIKLFTSKIAEACIEG 239
>gi|302389815|ref|YP_003825636.1| 30S ribosomal protein S2P [Thermosediminibacter oceani DSM 16646]
gi|302200443|gb|ADL08013.1| SSU ribosomal protein S2P [Thermosediminibacter oceani DSM 16646]
Length = 233
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 111/228 (48%), Gaps = 39/228 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +MK YI+ R G I DL ++ + + +A FV ++A
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKEYIFTERNGIYIIDLQKTVKKMEEAYEFVKNLA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVIL- 183
G +LFVG Q I++ A+ C+ F + W GM TN + + + + RL +L +
Sbjct: 62 AEGGKILFVGTKKQAQESIQEEAKRCEMFYVNQRWLGGMLTNFKTIKKRIERLKELERME 121
Query: 184 -----------------------------TNTLTT------VLEPNP---AIGEAAKMCI 205
+T+ V++P A+ EA K+ I
Sbjct: 122 EEGVFNVLPKKEVLNLRREKERLEKYLGGIKNMTSLPDALFVVDPRKEKIAVSEARKLKI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P + IVD+NC+P+ + Y +PGNDD A++ + A+L+GK+ Q
Sbjct: 182 PIIAIVDTNCDPDEVDYVIPGNDDAIRAVKLLTEKIADAVLEGKQGVQ 229
>gi|389809712|ref|ZP_10205434.1| 30S ribosomal protein S2 [Rhodanobacter thiooxydans LCS2]
gi|388441611|gb|EIL97873.1| 30S ribosomal protein S2 [Rhodanobacter thiooxydans LCS2]
Length = 290
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 109/223 (48%), Gaps = 41/223 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+++ L DA+NF++ +A +
Sbjct: 4 VTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTLPLFTDAMNFLSGLAQK 63
Query: 127 DGIVLFVG-QSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI--- 182
G +LFVG + + L E+ A+ F +R W GM TN + ++V+RL +L
Sbjct: 64 RGTILFVGTKRSAREPLAEEAARAGMPFVTSR-WLGGMLTNFRTVKQSVSRLKELEAAET 122
Query: 183 ---------------------LTNTLTTVLEPNP---------------AIGEAAKMCIP 206
L +L + + N A+ EA K+ IP
Sbjct: 123 DGSFEKLVKHEVLARRRERDKLQASLGGIKDMNRLPDALFVIDIGHEDIAVQEAKKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+ +VD+N NP L+ Y +PGNDD AIQ Y + +IL+GK
Sbjct: 183 VIAVVDTNYNPELVDYAIPGNDDAIRAIQLYARAAADSILEGK 225
>gi|389792809|ref|ZP_10195991.1| 30S ribosomal protein S2 [Rhodanobacter fulvus Jip2]
gi|388435673|gb|EIL92570.1| 30S ribosomal protein S2 [Rhodanobacter fulvus Jip2]
Length = 282
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 110/223 (49%), Gaps = 41/223 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+++ L DA+NF++ +A +
Sbjct: 4 VTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTLPLFTDAMNFLSGLAQK 63
Query: 127 DGIVLFVG-QSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI--- 182
G +LFVG + + L E+ A+ F +R W GM TN + ++V+RL +L
Sbjct: 64 RGTILFVGTKRSAREPLAEEAARAGMPFVTSR-WLGGMLTNFRTVKQSVSRLKELEAAET 122
Query: 183 ---------------------LTNTLTTVLEPNP---------------AIGEAAKMCIP 206
L +L + + N A+ EA K+ IP
Sbjct: 123 DGSFDKLVKHEVLARRREREKLQASLGGIKDMNRLPDALFVIDIGHEDIAVQEAKKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+ +VD+N NP+L+ Y +PGNDD AIQ Y + +IL+GK
Sbjct: 183 VIAVVDTNYNPDLVDYAIPGNDDAIRAIQLYARAAADSILEGK 225
>gi|218562794|ref|YP_002344573.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni NCTC
11168 = ATCC 700819]
gi|403055917|ref|YP_006633322.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
gi|419652177|ref|ZP_14183259.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
2008-894]
gi|419682457|ref|ZP_14211190.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 1213]
gi|25009226|sp|Q9PNB3.1|RS2_CAMJE RecName: Full=30S ribosomal protein S2
gi|112360500|emb|CAL35297.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni NCTC
11168 = ATCC 700819]
gi|380629921|gb|EIB48167.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
2008-894]
gi|380661567|gb|EIB77460.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 1213]
gi|401781569|emb|CCK67274.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
Length = 263
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 113/244 (46%), Gaps = 48/244 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G + DL ++ R N V A
Sbjct: 1 MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+LFVG Q I++ A+ C W GM TN
Sbjct: 61 EGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEE 120
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + PD++ + +T+ + A+ EA +
Sbjct: 121 DGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKI----AVQEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK-QDTLKLLSE 261
+ IP V +D+NC+P+L+TYP+PGNDD ++Q +CQ AI +GK + QD L++E
Sbjct: 177 LRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALREQDGEALVNE 236
Query: 262 KQEV 265
++E+
Sbjct: 237 EKEI 240
>gi|225181368|ref|ZP_03734812.1| ribosomal protein S2 [Dethiobacter alkaliphilus AHT 1]
gi|225167949|gb|EEG76756.1| ribosomal protein S2 [Dethiobacter alkaliphilus AHT 1]
Length = 251
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 114/242 (47%), Gaps = 39/242 (16%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +MK YI+ R G I DL ++ ++ D NFV ++A
Sbjct: 3 VVSMKQLLEAGVHFGHQTRRWNPKMKTYIFTERNGIYIIDLQKTVRMIDDCYNFVKNLAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
G ++FVG Q I+ A+ C F + W GM TN + + V RL +L
Sbjct: 63 DGGKIMFVGTKKQAQESIQTEAERCGMFYVNQRWLGGMLTNFKTIRNRVNRLIELEKMEE 122
Query: 181 -----------VI--------LTNTLTTV------------LEPNP---AIGEAAKMCIP 206
VI L L+ V ++P A+ EA K+ IP
Sbjct: 123 DGVFEVLPKKEVIKLRHEYDKLNKFLSGVRNMKSLPDALFIVDPRKEKIAVAEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEVQ 266
V IVD+NC+P+ I Y +PGNDD A++ A+L+G + +QD + + E + Q
Sbjct: 183 IVAIVDTNCDPDEIDYIIPGNDDAIRAVKLISGRMADAVLEGLEGRQDHVVVEDEANQQQ 242
Query: 267 HN 268
+
Sbjct: 243 AD 244
>gi|57168060|ref|ZP_00367199.1| ribosomal protein S2 [Campylobacter coli RM2228]
gi|419536226|ref|ZP_14075709.1| 30S ribosomal protein S2 [Campylobacter coli 111-3]
gi|419539153|ref|ZP_14078497.1| 30S ribosomal protein S2 [Campylobacter coli 90-3]
gi|419540956|ref|ZP_14080182.1| 30S ribosomal protein S2 [Campylobacter coli Z163]
gi|419542852|ref|ZP_14081962.1| 30S ribosomal protein S2 [Campylobacter coli 2548]
gi|419544253|ref|ZP_14083217.1| 30S ribosomal protein S2 [Campylobacter coli 2553]
gi|419547210|ref|ZP_14085948.1| 30S ribosomal protein S2 [Campylobacter coli 2680]
gi|419549300|ref|ZP_14087902.1| 30S ribosomal protein S2 [Campylobacter coli 2685]
gi|419550991|ref|ZP_14089466.1| 30S ribosomal protein S2 [Campylobacter coli 2688]
gi|419552499|ref|ZP_14090804.1| 30S ribosomal protein S2 [Campylobacter coli 2692]
gi|419555200|ref|ZP_14093300.1| 30S ribosomal protein S2 [Campylobacter coli 2698]
gi|419556849|ref|ZP_14094824.1| 30S ribosomal protein S2 [Campylobacter coli 84-2]
gi|419561041|ref|ZP_14098670.1| 30S ribosomal protein S2 [Campylobacter coli 86119]
gi|419562362|ref|ZP_14099876.1| 30S ribosomal protein S2 [Campylobacter coli 1091]
gi|419564083|ref|ZP_14101467.1| 30S ribosomal protein S2 [Campylobacter coli 1098]
gi|419566569|ref|ZP_14103824.1| 30S ribosomal protein S2 [Campylobacter coli 1148]
gi|419568912|ref|ZP_14106039.1| 30S ribosomal protein S2 [Campylobacter coli 1417]
gi|419570942|ref|ZP_14107956.1| 30S ribosomal protein S2 [Campylobacter coli 7--1]
gi|419571638|ref|ZP_14108585.1| 30S ribosomal protein S2 [Campylobacter coli 132-6]
gi|419573770|ref|ZP_14110558.1| 30S ribosomal protein S2 [Campylobacter coli 1891]
gi|419575752|ref|ZP_14112433.1| 30S ribosomal protein S2 [Campylobacter coli 1909]
gi|419576924|ref|ZP_14113489.1| 30S ribosomal protein S2 [Campylobacter coli 59-2]
gi|419579561|ref|ZP_14115967.1| 30S ribosomal protein S2 [Campylobacter coli 1948]
gi|419580430|ref|ZP_14116753.1| 30S ribosomal protein S2 [Campylobacter coli 1957]
gi|419582701|ref|ZP_14118896.1| 30S ribosomal protein S2 [Campylobacter coli 1961]
gi|419585803|ref|ZP_14121847.1| 30S ribosomal protein S2 [Campylobacter coli 202/04]
gi|419587543|ref|ZP_14123461.1| 30S ribosomal protein S2 [Campylobacter coli 67-8]
gi|419591454|ref|ZP_14126803.1| 30S ribosomal protein S2 [Campylobacter coli 37/05]
gi|419592964|ref|ZP_14128202.1| 30S ribosomal protein S2 [Campylobacter coli LMG 9854]
gi|419595967|ref|ZP_14131041.1| 30S ribosomal protein S2 [Campylobacter coli LMG 23336]
gi|419597914|ref|ZP_14132835.1| 30S ribosomal protein S2 [Campylobacter coli LMG 23341]
gi|419599235|ref|ZP_14134100.1| 30S ribosomal protein S2 [Campylobacter coli LMG 23342]
gi|419601400|ref|ZP_14136113.1| 30S ribosomal protein S2 [Campylobacter coli LMG 23344]
gi|419602477|ref|ZP_14137055.1| 30S ribosomal protein S2 [Campylobacter coli 151-9]
gi|419604692|ref|ZP_14139151.1| 30S ribosomal protein S2 [Campylobacter coli LMG 9853]
gi|419605851|ref|ZP_14140238.1| 30S ribosomal protein S2 [Campylobacter coli LMG 9860]
gi|419609502|ref|ZP_14143636.1| 30S ribosomal protein S2 [Campylobacter coli H6]
gi|419611237|ref|ZP_14145279.1| 30S ribosomal protein S2 [Campylobacter coli H8]
gi|419613381|ref|ZP_14147226.1| 30S ribosomal protein S2 [Campylobacter coli H9]
gi|419613942|ref|ZP_14147734.1| 30S ribosomal protein S2 [Campylobacter coli H56]
gi|419616165|ref|ZP_14149816.1| 30S ribosomal protein S2 [Campylobacter coli Z156]
gi|57020434|gb|EAL57103.1| ribosomal protein S2 [Campylobacter coli RM2228]
gi|380515735|gb|EIA41889.1| 30S ribosomal protein S2 [Campylobacter coli Z163]
gi|380515929|gb|EIA42075.1| 30S ribosomal protein S2 [Campylobacter coli 90-3]
gi|380518619|gb|EIA44712.1| 30S ribosomal protein S2 [Campylobacter coli 111-3]
gi|380521166|gb|EIA46913.1| 30S ribosomal protein S2 [Campylobacter coli 2680]
gi|380521899|gb|EIA47606.1| 30S ribosomal protein S2 [Campylobacter coli 2548]
gi|380525412|gb|EIA50934.1| 30S ribosomal protein S2 [Campylobacter coli 2553]
gi|380526274|gb|EIA51742.1| 30S ribosomal protein S2 [Campylobacter coli 2685]
gi|380529325|gb|EIA54493.1| 30S ribosomal protein S2 [Campylobacter coli 2688]
gi|380530428|gb|EIA55508.1| 30S ribosomal protein S2 [Campylobacter coli 2698]
gi|380531381|gb|EIA56406.1| 30S ribosomal protein S2 [Campylobacter coli 2692]
gi|380534320|gb|EIA59123.1| 30S ribosomal protein S2 [Campylobacter coli 84-2]
gi|380536417|gb|EIA61050.1| 30S ribosomal protein S2 [Campylobacter coli 86119]
gi|380541139|gb|EIA65417.1| 30S ribosomal protein S2 [Campylobacter coli 1091]
gi|380543010|gb|EIA67232.1| 30S ribosomal protein S2 [Campylobacter coli 1098]
gi|380544686|gb|EIA68701.1| 30S ribosomal protein S2 [Campylobacter coli 1417]
gi|380544913|gb|EIA68916.1| 30S ribosomal protein S2 [Campylobacter coli 7--1]
gi|380546099|gb|EIA70059.1| 30S ribosomal protein S2 [Campylobacter coli 1148]
gi|380550831|gb|EIA74465.1| 30S ribosomal protein S2 [Campylobacter coli 1891]
gi|380552928|gb|EIA76469.1| 30S ribosomal protein S2 [Campylobacter coli 1909]
gi|380553146|gb|EIA76674.1| 30S ribosomal protein S2 [Campylobacter coli 132-6]
gi|380556877|gb|EIA80107.1| 30S ribosomal protein S2 [Campylobacter coli 1948]
gi|380558687|gb|EIA81862.1| 30S ribosomal protein S2 [Campylobacter coli 59-2]
gi|380560634|gb|EIA83698.1| 30S ribosomal protein S2 [Campylobacter coli 1957]
gi|380561501|gb|EIA84430.1| 30S ribosomal protein S2 [Campylobacter coli 202/04]
gi|380564206|gb|EIA87022.1| 30S ribosomal protein S2 [Campylobacter coli 67-8]
gi|380564664|gb|EIA87465.1| 30S ribosomal protein S2 [Campylobacter coli 1961]
gi|380568195|gb|EIA90676.1| 30S ribosomal protein S2 [Campylobacter coli 37/05]
gi|380571566|gb|EIA93947.1| 30S ribosomal protein S2 [Campylobacter coli LMG 9854]
gi|380572255|gb|EIA94576.1| 30S ribosomal protein S2 [Campylobacter coli LMG 23341]
gi|380572592|gb|EIA94816.1| 30S ribosomal protein S2 [Campylobacter coli LMG 23336]
gi|380575660|gb|EIA97731.1| 30S ribosomal protein S2 [Campylobacter coli LMG 23342]
gi|380579504|gb|EIB01297.1| 30S ribosomal protein S2 [Campylobacter coli LMG 9853]
gi|380581085|gb|EIB02816.1| 30S ribosomal protein S2 [Campylobacter coli 151-9]
gi|380581623|gb|EIB03343.1| 30S ribosomal protein S2 [Campylobacter coli LMG 23344]
gi|380583587|gb|EIB05115.1| 30S ribosomal protein S2 [Campylobacter coli H6]
gi|380587692|gb|EIB08872.1| 30S ribosomal protein S2 [Campylobacter coli LMG 9860]
gi|380588092|gb|EIB09242.1| 30S ribosomal protein S2 [Campylobacter coli H9]
gi|380588681|gb|EIB09788.1| 30S ribosomal protein S2 [Campylobacter coli H8]
gi|380593408|gb|EIB14236.1| 30S ribosomal protein S2 [Campylobacter coli H56]
gi|380596091|gb|EIB16800.1| 30S ribosomal protein S2 [Campylobacter coli Z156]
Length = 263
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 48/244 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G + DL ++ R N V A
Sbjct: 1 MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+LFVG Q I++ A+ C W GM TN
Sbjct: 61 EGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEE 120
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + PD++ + +T+ + A+ EA +
Sbjct: 121 DGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKI----AVQEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK-QDTLKLLSE 261
+ IP V +D+NC+P+L+TYP+PGNDD ++Q +CQ AI +GK + QD L SE
Sbjct: 177 LRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALREQDGEALPSE 236
Query: 262 KQEV 265
++E+
Sbjct: 237 EKEI 240
>gi|84623524|ref|YP_450896.1| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|122879150|ref|YP_200616.6| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|384419974|ref|YP_005629334.1| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzicola BLS256]
gi|123766594|sp|Q2P4A5.1|RS2_XANOM RecName: Full=30S ribosomal protein S2
gi|209574091|sp|Q5H1E0.2|RS2_XANOR RecName: Full=30S ribosomal protein S2
gi|84367464|dbj|BAE68622.1| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|353462887|gb|AEQ97166.1| ribosomal protein S2 [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 267
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 109/235 (46%), Gaps = 39/235 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ M YI+G R I +L+++ L DA+N+++ IA +
Sbjct: 4 VTMRQMLEAGVHFGHQCRYWHPNMAQYIFGARGKIHIINLEKTVPLFNDAMNYLSSIAQK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LF+G I++ A+ C T+ W G TN + ++V RL +L
Sbjct: 64 RGTILFLGTKRSARASIKEEAERCGMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETD 123
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L +L + E N AI EA K+ IP
Sbjct: 124 GTFDKLVKHEVLSLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+ +VD+N NPNL+ Y +PGNDD A+Q Y + A+L+GK A ++ + E+
Sbjct: 184 IAVVDTNYNPNLVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNSASVREEE 238
>gi|451947678|ref|YP_007468273.1| ribosomal protein S2 [Desulfocapsa sulfexigens DSM 10523]
gi|451907026|gb|AGF78620.1| ribosomal protein S2 [Desulfocapsa sulfexigens DSM 10523]
Length = 260
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 104/225 (46%), Gaps = 39/225 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V VK+M A +H GH+ + +MKPYIYG R G I +LD+S +L A NFV +
Sbjct: 4 VTVKEMLQAGLHFGHQTRRWNPKMKPYIYGPRNGIYIINLDKSKKLFDTASNFVVDEVSK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
G +LFVG Q ++++ A C W GM TN + + ++ RL
Sbjct: 64 GGNILFVGTKRQARNIVKEEAIRCGMPYVDHRWLGGMLTNFQTIKNSIERLKTIESMQED 123
Query: 178 ------PDLVIL-------------------TNTLTTVLEPNP-----AIGEAAKMCIPT 207
P IL NT + +L +P AI EA K+ IP
Sbjct: 124 GSINRFPKKEILLMGKERIKLERNVGGIKNMRNTPSAILVIDPKNETIAINEAKKLRIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
+ + D+NC+P+ I Y +PGNDD +I+ C +L G+ A+
Sbjct: 184 IALADTNCDPDGIDYIIPGNDDAIRSIRLICSQIAEGVLTGQAAR 228
>gi|167646767|ref|YP_001684430.1| 30S ribosomal protein S2 [Caulobacter sp. K31]
gi|189044929|sp|B0SZ21.1|RS2_CAUSK RecName: Full=30S ribosomal protein S2
gi|167349197|gb|ABZ71932.1| ribosomal protein S2 [Caulobacter sp. K31]
Length = 313
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 100/227 (44%), Gaps = 46/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A H GH+ + +M YI+G R I DL QS LL AL V +A G
Sbjct: 8 MRQLLEAGAHFGHQTHRWNPKMDRYIFGSRSNIHIIDLSQSIPLLHQALVKVREVAAAGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S + A+ C ++ W G TN + ++ RL
Sbjct: 68 RVLFVGTKRQASDPVATAAKRCAQYYVNHRWLGGTLTNWRTVSGSIARLRELEGIMGGES 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PD++ + +T + AI EA K+ IP
Sbjct: 128 AGRSKKELLQLTRERDKLELSLGGIKDMGGIPDIMFVIDTNKEAI----AILEARKLNIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V I+D+NC+P+ ITYP+PGNDD A+Q YC + A+L G A Q
Sbjct: 184 VVAILDTNCDPDGITYPIPGNDDAARALQLYCDLIADAVLDGLAAGQ 230
>gi|256750772|ref|ZP_05491657.1| ribosomal protein S2 [Thermoanaerobacter ethanolicus CCSD1]
gi|300914382|ref|ZP_07131698.1| ribosomal protein S2 [Thermoanaerobacter sp. X561]
gi|256750355|gb|EEU63374.1| ribosomal protein S2 [Thermoanaerobacter ethanolicus CCSD1]
gi|300889317|gb|EFK84463.1| ribosomal protein S2 [Thermoanaerobacter sp. X561]
Length = 261
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 39/228 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +M PYI+ R G I DL Q+ E L A FV +A
Sbjct: 28 SVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKKLA 87
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
G +LFVG Q I++ A+ C F + W G TN + + + RL +L +
Sbjct: 88 MEGGTILFVGTKKQAQDSIKEEAERCGMFYVNQRWLGGTLTNFKTIRGRIQRLKELKKME 147
Query: 185 NTLT------------------------------------TVLEPNP---AIGEAAKMCI 205
T +++P A+ EA + I
Sbjct: 148 EDGTFDVLPKKEVIKLRKEKERLQKFLGGIENMQSLPSALFIVDPKKEAIAVAEARSLEI 207
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P V IVD+NC+P LI YP+PGNDD A++ A+++G + +Q
Sbjct: 208 PIVAIVDTNCDPELIDYPIPGNDDAIRAVKLITSKIADAVIEGNQGEQ 255
>gi|320116052|ref|YP_004186211.1| 30S ribosomal protein S2 [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|319929143|gb|ADV79828.1| ribosomal protein S2 [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 261
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 39/228 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +M PYI+ R G I DL Q+ E L A FV +A
Sbjct: 28 SVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKKLA 87
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
G +LFVG Q I++ A+ C F + W G TN + + + RL +L +
Sbjct: 88 MEGGTILFVGTKKQAQDSIKEEAERCGMFYVNQRWLGGTLTNFKTIRGRIQRLKELKKME 147
Query: 185 NTLT------------------------------------TVLEPNP---AIGEAAKMCI 205
T +++P A+ EA + I
Sbjct: 148 EDGTFDVLPKKEVIKLRKEKERLQKFLGGIENMESLPSALFIVDPKKEAIAVAEARSLEI 207
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P V IVD+NC+P LI YP+PGNDD A++ A+++G + +Q
Sbjct: 208 PIVAIVDTNCDPELIDYPIPGNDDAIRAVKLITSKIADAVIEGNQGEQ 255
>gi|399992745|ref|YP_006572985.1| 30S ribosomal protein S2 [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|400754425|ref|YP_006562793.1| 30S ribosomal protein S2 [Phaeobacter gallaeciensis 2.10]
gi|398653578|gb|AFO87548.1| 30S ribosomal protein S2 [Phaeobacter gallaeciensis 2.10]
gi|398657300|gb|AFO91266.1| 30S ribosomal protein S2 [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 257
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 99/226 (43%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM P+IYG R G I DL Q+ +L ALN V + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMSPFIYGSRNGIHILDLTQTVPMLDAALNAVRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q + I A+ ++ W G TN + + +++ RL
Sbjct: 68 RVLFVGTKRQAAQPIADAAEKSAQYFMNHRWLGGTLTNWKTVSQSINRLKEIDEKMASGA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + L AI EA K+ IP
Sbjct: 128 EGLTKKERLGMERDQLKLEASLGGIRDMGGVPDLLFVIDVKKEAL----AIAEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V IVD+NC+P+ + Y +PGNDD AI YC + A L G A+
Sbjct: 184 VVAIVDTNCSPDGVDYIIPGNDDAARAIALYCDLVARAALDGMSAQ 229
>gi|389774312|ref|ZP_10192431.1| 30S ribosomal protein S2 [Rhodanobacter spathiphylli B39]
gi|388437911|gb|EIL94666.1| 30S ribosomal protein S2 [Rhodanobacter spathiphylli B39]
Length = 287
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 109/223 (48%), Gaps = 41/223 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+++ L DA+NF++ +A +
Sbjct: 4 VTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTLPLFTDAMNFLSGLAQK 63
Query: 127 DGIVLFVG-QSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI--- 182
G +LFVG + + L E+ A+ F +R W GM TN + ++V+RL +L
Sbjct: 64 RGTILFVGTKRSAREPLAEEAARAGMPFVTSR-WLGGMLTNFRTVKQSVSRLKELEAAET 122
Query: 183 ---------------------LTNTLTTVLEPNP---------------AIGEAAKMCIP 206
L +L + + N A+ EA K+ IP
Sbjct: 123 DGSFDKLVKHEVLARRRERDKLQASLGGIKDMNRLPDALFVIDIGHEDIAVQEAKKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+ +VD+N NP L+ Y +PGNDD AIQ Y + +IL+GK
Sbjct: 183 VIAVVDTNYNPELVDYAIPGNDDAIRAIQLYARAAADSILEGK 225
>gi|42525107|ref|NP_970487.1| 30S ribosomal protein S2 [Bdellovibrio bacteriovorus HD100]
gi|81697725|sp|Q6MGY6.1|RS2_BDEBA RecName: Full=30S ribosomal protein S2
gi|39577318|emb|CAE81141.1| 30S ribosomal protein S2 [Bdellovibrio bacteriovorus HD100]
Length = 313
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 39/236 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K+M DA VH GH+ + +MKPY+Y R G I DL ++ A FV IA
Sbjct: 4 VTMKEMLDAGVHFGHQTQRWNPKMKPYVYTARGGIHIIDLQKTVVRANKAAEFVKEIAAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
G ++FVG Q I++ A C ++ T+ W GM TN E + ++ RL
Sbjct: 64 GGRLIFVGTKKQAIEPIQEAAAKCGQYYVTKRWLGGMMTNFETIKSSIDRLRKIDTMKEK 123
Query: 178 ---------------PDLVILTNTLTTV--LEPNP-------------AIGEAAKMCIPT 207
+ + LT+ L + ++ P A+ EA ++ IP
Sbjct: 124 GEFNYLTKKERAKLEKEYLRLTDFLAGIRDMKEMPSAMFVVDLPKEHIAVAEAKRLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQ 263
V I D+N +P + + +PGNDD +I+ + + A L+G K + L+ +++KQ
Sbjct: 184 VAIADTNSDPESVDFAIPGNDDAIRSIKLFSNLVADAYLEGAKEWEGKLRTMTDKQ 239
>gi|305431788|ref|ZP_07400955.1| 30S ribosomal protein S2 [Campylobacter coli JV20]
gi|304444872|gb|EFM37518.1| 30S ribosomal protein S2 [Campylobacter coli JV20]
Length = 248
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 48/244 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G + DL ++ R N V A
Sbjct: 1 MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+LFVG Q I++ A+ C W GM TN
Sbjct: 61 EGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEE 120
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + PD++ + +T+ + A+ EA +
Sbjct: 121 DGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKI----AVQEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK-QDTLKLLSE 261
+ IP V +D+NC+P+L+TYP+PGNDD ++Q +CQ AI +GK + QD L SE
Sbjct: 177 LRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALREQDGEALPSE 236
Query: 262 KQEV 265
++E+
Sbjct: 237 EKEI 240
>gi|161899039|ref|YP_198638.2| 30S ribosomal protein S2 [Wolbachia endosymbiont strain TRS of
Brugia malayi]
Length = 279
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 110/226 (48%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQI--IFDLDQSAELLRDALNFVAHIA 124
V V+D+ + VH GHKI + +M PYIYGV Q I DL ++ LL+ A+ + ++A
Sbjct: 4 VTVRDLARSGVHFGHKISRWNAKMAPYIYGVHQENRIHIIDLRKTLPLLQAAMKVLYNVA 63
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS-------------EKLF 171
++ G +LFVG Q +I A C ++ W GM TN EK+
Sbjct: 64 FQGGRILFVGTKFQALDIIASEAIRCGQYYVNYRWLGGMLTNWGTISSSIKTLVQYEKVL 123
Query: 172 -----------------------------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
R + +PD++ + +T + + A+ EA K
Sbjct: 124 NAENSILTKKELGNIEKKRQKLDKALGGIREMGAVPDVLFIIDT----NKEHIAVKEAEK 179
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ IP V I+D+N +P+ ITYP+PGNDD+ +I+ YC++ +IL G
Sbjct: 180 LEIPVVAILDTNSDPDGITYPIPGNDDSRKSIELYCRLAADSILAG 225
>gi|419626014|ref|ZP_14159018.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
23223]
gi|380603932|gb|EIB23979.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
23223]
Length = 263
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 113/244 (46%), Gaps = 48/244 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G + DL ++ R N V A
Sbjct: 1 MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL-------- 177
+LFVG Q I++ A+ C W GM TN + +++ +L
Sbjct: 61 EGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFSTIRQSIRKLEVIEKMEE 120
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PD++ + +T+ + A+ EA +
Sbjct: 121 DGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKI----AVQEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK-QDTLKLLSE 261
+ IP V +D+NC+P+L+TYP+PGNDD ++Q +CQ AI +GK + QD L +E
Sbjct: 177 LRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALREQDGEALANE 236
Query: 262 KQEV 265
++E+
Sbjct: 237 EKEI 240
>gi|75497578|sp|Q5GRH8.1|RS2_WOLTR RecName: Full=30S ribosomal protein S2
gi|58419381|gb|AAW71396.1| Ribosomal protein S2 [Wolbachia endosymbiont strain TRS of Brugia
malayi]
Length = 284
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 110/226 (48%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQI--IFDLDQSAELLRDALNFVAHIA 124
V V+D+ + VH GHKI + +M PYIYGV Q I DL ++ LL+ A+ + ++A
Sbjct: 9 VTVRDLARSGVHFGHKISRWNAKMAPYIYGVHQENRIHIIDLRKTLPLLQAAMKVLYNVA 68
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------ 166
++ G +LFVG Q +I A C ++ W GM TN
Sbjct: 69 FQGGRILFVGTKFQALDIIASEAIRCGQYYVNYRWLGGMLTNWGTISSSIKTLVQYEKVL 128
Query: 167 ------------------SEKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
+KL R + +PD++ + +T + + A+ EA K
Sbjct: 129 NAENSILTKKELGNIEKKRQKLDKALGGIREMGAVPDVLFIIDT----NKEHIAVKEAEK 184
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ IP V I+D+N +P+ ITYP+PGNDD+ +I+ YC++ +IL G
Sbjct: 185 LEIPVVAILDTNSDPDGITYPIPGNDDSRKSIELYCRLAADSILAG 230
>gi|350270834|ref|YP_004882142.1| 30S ribosomal protein S2 [Oscillibacter valericigenes Sjm18-20]
gi|348595676|dbj|BAK99636.1| 30S ribosomal protein S2 [Oscillibacter valericigenes Sjm18-20]
Length = 252
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + +A VH GH+ + +M PYIY R G I DL ++ L +A NFV ++
Sbjct: 5 SIVSMKSLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIVDLQKTVRKLEEAYNFVRDLS 64
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
+LFVG Q I + AQ C ++ W GM TN + + V RL L +
Sbjct: 65 ADGKSLLFVGTKKQAQDAIREEAQRCGQYFVNARWLGGMMTNFKTMRTRVDRLHQLKTMQ 124
Query: 185 NTLTTVLEPNP---------------------------------------AIGEAAKMCI 205
T + P AI EA K+ I
Sbjct: 125 EDGTFDMLPKKEVMKHLGEIAKLEKYLGGVENMKTLPGALFIVDTRKERNAIAEAHKLGI 184
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P V I D+NC+P+ I Y +PGNDD AI+ + A+L+GK+ +Q
Sbjct: 185 PVVAIADTNCDPDEIDYVIPGNDDAIRAIKLISSIMANAMLEGKQGEQ 232
>gi|407777613|ref|ZP_11124881.1| 30S ribosomal protein S2 [Nitratireductor pacificus pht-3B]
gi|407300413|gb|EKF19537.1| 30S ribosomal protein S2 [Nitratireductor pacificus pht-3B]
Length = 265
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 46/234 (19%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++ + +A VH GH+ + +M YI+G R I DL Q+ L+ AL V+ +
Sbjct: 6 ISMRQLLEAGVHFGHQTHRWNPKMANYIFGARNNVHIIDLSQTVPLMHQALKMVSDTVAK 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
G +LFVG Q S ++ A+ ++ W GM TN
Sbjct: 66 GGRILFVGTKRQASDIVADAAKRSAQYYVNARWLGGMLTNWKTISNSIQRLRKLDELLAS 125
Query: 167 ----------------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMC 204
EKL RA+ + PDL+ + +T + A+ EA ++
Sbjct: 126 DAQGFTKKERLNLEREREKLDRALGGIRDMGSTPDLMFVIDTNKEAI----AVQEAKRLG 181
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
IP V IVDSNC+P+ I +P+PGNDD A+ YC + A + G + +Q + +
Sbjct: 182 IPVVAIVDSNCDPDTIDFPIPGNDDAARALALYCDLIARAAIDGIERQQGAMGM 235
>gi|393762682|ref|ZP_10351308.1| 30S ribosomal protein S2 [Alishewanella agri BL06]
gi|392606304|gb|EIW89189.1| 30S ribosomal protein S2 [Alishewanella agri BL06]
Length = 242
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+Q+ ++ DAL F+ +A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEQTVPMMNDALAFIQQVAAK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S I++ A +F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAIKEAAVKADQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQD 123
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L +L + E AI EA + IP
Sbjct: 124 GTFDKLTKKEALDRTREMDKLEKSLGGIKEMGGLPDVLFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
V IVD+N +P + Y +PGNDD AIQ Y AI +G+
Sbjct: 184 VAIVDTNSDPKGVDYVIPGNDDAIRAIQLYLGAVGQAIQEGR 225
>gi|73748222|ref|YP_307461.1| 30S ribosomal protein S2 [Dehalococcoides sp. CBDB1]
gi|147669004|ref|YP_001213822.1| 30S ribosomal protein S2 [Dehalococcoides sp. BAV1]
gi|289432271|ref|YP_003462144.1| 30S ribosomal protein S2 [Dehalococcoides sp. GT]
gi|452203230|ref|YP_007483363.1| 30S ribosomal protein S2 [Dehalococcoides mccartyi DCMB5]
gi|452204666|ref|YP_007484795.1| 30S ribosomal protein S2 [Dehalococcoides mccartyi BTF08]
gi|123759800|sp|Q3ZZC1.1|RS2_DEHSC RecName: Full=30S ribosomal protein S2
gi|189044936|sp|A5FS79.1|RS2_DEHSB RecName: Full=30S ribosomal protein S2
gi|73659938|emb|CAI82545.1| ribosomal protein S2 [Dehalococcoides sp. CBDB1]
gi|146269952|gb|ABQ16944.1| SSU ribosomal protein S2P [Dehalococcoides sp. BAV1]
gi|288945991|gb|ADC73688.1| ribosomal protein S2 [Dehalococcoides sp. GT]
gi|452110289|gb|AGG06021.1| 30S ribosomal protein S2 [Dehalococcoides mccartyi DCMB5]
gi|452111722|gb|AGG07453.1| 30S ribosomal protein S2 [Dehalococcoides mccartyi BTF08]
Length = 245
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 47/230 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K++ +A H GH+ RMK YI+ R G I DL+++ +L A N++ + G
Sbjct: 6 IKELLEAGAHFGHQTSRWHPRMKKYIFTKRNGIHIIDLEKTVVMLDKACNYINQVVSDGG 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q ++ + A+ C + + W G+ TN
Sbjct: 66 KVLFVGTKKQAQEILAEEAKRCGMYFINQRWTGGILTNFHSIQSRIDYLVRLEDQQARGD 125
Query: 167 --------SEKL-------------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
++KL F+ +TRLPD++ + + + + A+ EA +M +
Sbjct: 126 FSRLPKKEAQKLGEEIARLNRTMGGFKEMTRLPDVIFVVDPIKEKI----AMAEAKRMGV 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
P V +VD+NCNP+ + YPVP NDD AI+ C A+++ + A + T
Sbjct: 182 PLVAMVDTNCNPDEVDYPVPSNDDAMRAIKLICSKMADAVIEAQNAMKVT 231
>gi|110679879|ref|YP_682886.1| 30S ribosomal protein S2 [Roseobacter denitrificans OCh 114]
gi|123361841|sp|Q165Z3.1|RS2_ROSDO RecName: Full=30S ribosomal protein S2
gi|109455995|gb|ABG32200.1| ribosomal protein S2 [Roseobacter denitrificans OCh 114]
Length = 260
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM P+IYG R G I DL Q+ +L AL + + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMGPFIYGARNGIHIMDLTQTVPMLDQALQAIRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
+LFVG Q I A+ C ++ W G TN + + +++ RL
Sbjct: 68 SILFVGTKRQAQQPIADAAEKCAQYYMNHRWLGGTLTNWQTVSQSINRLKAIDEQSERGF 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + L A+ EA K+ IP
Sbjct: 128 EGLTKKERLGMERDQGKLQASLGGIREMGGRPDLIFVIDVKKEAL----AVAEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V +VD+NC P+ I Y +PGNDD AI YC + A L G A+
Sbjct: 184 VVAVVDTNCAPDGIDYIIPGNDDASRAISLYCDLAARAALDGMSAQ 229
>gi|419621828|ref|ZP_14155075.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
23216]
gi|419641652|ref|ZP_14173534.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
23357]
gi|380601097|gb|EIB21418.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
23216]
gi|380616233|gb|EIB35445.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
23357]
Length = 263
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 48/244 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G + DL ++ R N V A
Sbjct: 1 MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+LFVG Q I++ A+ C W GM TN
Sbjct: 61 EGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEE 120
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + PD++ + +T+ + A+ EA +
Sbjct: 121 DGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVVDTVKEKI----AVQEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK-QDTLKLLSE 261
+ IP V +D+NC+P+L+TYP+PGNDD ++Q +CQ AI +GK + QD L +E
Sbjct: 177 LRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALREQDGEALANE 236
Query: 262 KQEV 265
++E+
Sbjct: 237 EKEI 240
>gi|383454223|ref|YP_005368212.1| 30S ribosomal protein S2 [Corallococcus coralloides DSM 2259]
gi|380734249|gb|AFE10251.1| 30S ribosomal protein S2 [Corallococcus coralloides DSM 2259]
Length = 326
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 101/221 (45%), Gaps = 39/221 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++ + +A VH GH+ + +MKPYI+G R G I DL ++ + R A FVA I R
Sbjct: 20 ITMRQLLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVTMARAAFRFVADITAR 79
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
G VLFVG Q +I + A +F T W G TN + + + + RL L +
Sbjct: 80 GGSVLFVGTKKQAQDVIHEEAGRAGQFFVTSRWLGGTLTNFKTIKQGIDRLKTLEKMAED 139
Query: 187 LT------------------------------------TVLEPNP---AIGEAAKMCIPT 207
T V++P AI EA ++ IP
Sbjct: 140 GTFEVLPKKEVAQLEREREKLEKNLGGVKNMAKLPRCVFVIDPKKEHIAIHEATRLGIPV 199
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+G+VD+NC+P+ I + +PGNDD +I+ + A L+G
Sbjct: 200 IGLVDTNCDPDGIDFVIPGNDDAIRSIKLFTSKIADACLEG 240
>gi|424793697|ref|ZP_18219774.1| 30S ribosomal protein S2 [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422796437|gb|EKU24943.1| 30S ribosomal protein S2 [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 265
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 114/237 (48%), Gaps = 43/237 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ M YI+G R I +L+++ L DA+NF++ +A +
Sbjct: 4 VTMRQMLEAGVHFGHQCRHWHPNMAQYIFGARGKIHIINLEKTVPLFNDAMNFISSVAQK 63
Query: 127 DGIVLFVG--QSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI-- 182
G +LF+G +SA++S +++ A+ C + T+ W G TN + ++V RL +L
Sbjct: 64 RGTILFLGTKRSARDS--VKEEAERCGQPFMTQRWLGGTLTNFRTVKQSVARLKELEAAE 121
Query: 183 ----------------------LTNTLTTVLEPNP---------------AIGEAAKMCI 205
L +L + E N AI EA K+ I
Sbjct: 122 TDGTFDKLVKHEVLTLRREREKLLASLGGIKEMNRLPDALFVIDIGHEDIAIKEAKKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
P V +VD+N NP L+ Y +PGNDD A+Q Y + A+L+GK A + + E+
Sbjct: 182 PVVAVVDTNYNPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNAASVREEE 238
>gi|303247587|ref|ZP_07333858.1| ribosomal protein S2 [Desulfovibrio fructosovorans JJ]
gi|302491067|gb|EFL50961.1| ribosomal protein S2 [Desulfovibrio fructosovorans JJ]
Length = 266
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 39/227 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K + + VH GH+ + +M+P+I+G R G I DL Q+ L + A +FVA I
Sbjct: 4 VTMKQLLETGVHFGHQTRRWNPKMRPFIFGARNGIHIIDLQQTVRLYQKAHDFVAGIVAG 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G V+FVG Q ++K A+ +F T W GM TN + + +++ RL +L
Sbjct: 64 GGKVVFVGTKRQAQESVKKEAERAGQFFVTNRWMGGMLTNFQTIKKSIDRLKNLERMFGD 123
Query: 181 ----------VILTNTLTTVLEPN-----------------------PAIGEAAKMCIPT 207
+++ L N A+ E K+ IP
Sbjct: 124 GSIKRFPKKEIVMMGREVEKLNANLGGIKDMDKLPQAAFIIDPKREEIAVQECRKLGIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
V +VD+NC+P++I Y +PGNDD AI+ + A L+G +D
Sbjct: 184 VAVVDTNCDPDVIDYVIPGNDDAIRAIKLFASTVAEACLEGAAQTKD 230
>gi|53805191|ref|YP_113086.1| 30S ribosomal protein S2 [Methylococcus capsulatus str. Bath]
gi|61215446|sp|Q60BB0.1|RS2_METCA RecName: Full=30S ribosomal protein S2
gi|53758952|gb|AAU93243.1| ribosomal protein S2 [Methylococcus capsulatus str. Bath]
Length = 256
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 111/240 (46%), Gaps = 41/240 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M P+I+G R I +L+++ L DA+ ++ +A
Sbjct: 4 VTMRQMLEAGVHFGHQTRYWNPKMAPFIFGARSNIHIINLEKTLPLFNDAMKYLEQVAAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
G +LFVG +IE+ A+ C W GM TN + + ++ R+ DL + +
Sbjct: 64 RGKILFVGTKKTMRKVIEEEARRCGMPYVNHRWLGGMLTNFKTIKASIARMKDLQAMRDD 123
Query: 186 ---------------------------------------TLTTVLEPNPAIGEAAKMCIP 206
+ T E N A+ EA K+ IP
Sbjct: 124 GRLNRFSKKEALGMMRELEKLVCNVGGIGDMDRLPDVMFIIDTGYEKN-AVSEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEVQ 266
VG+VD+N +P I Y +PGNDD+ A+Q Y Q TAIL+GK + D + E E++
Sbjct: 183 VVGVVDTNNSPVGIDYVIPGNDDSIRAVQLYAQSAATAILRGKASGVDFGAVADEFVEME 242
>gi|283956580|ref|ZP_06374059.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 1336]
gi|283791829|gb|EFC30619.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 1336]
Length = 263
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 48/244 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G + DL ++ R N V A
Sbjct: 1 MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVREAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+LFVG Q I++ A+ C W GM TN
Sbjct: 61 EGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEE 120
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + PD++ + +T+ + A+ EA +
Sbjct: 121 DGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVVDTVKEKI----AVQEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK-QDTLKLLSE 261
+ IP V +D+NC+P+L+TYP+PGNDD ++Q +CQ AI +GK + QD L +E
Sbjct: 177 LRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALREQDGEALPNE 236
Query: 262 KQEV 265
++E+
Sbjct: 237 EKEI 240
>gi|452995275|emb|CCQ93042.1| ribosomal protein S2 [Clostridium ultunense Esp]
Length = 235
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 39/228 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +M YI+ R G I DL ++ +++ DA NFV I+
Sbjct: 2 SVITMKSLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVKMVEDAYNFVKEIS 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
G +LFVG Q IE A+ C + W GM TN + + + + RL +L
Sbjct: 62 AEGGEILFVGTKKQAQEAIETEAKRCGMHYVNQRWLGGMLTNYKTIRKRIDRLHELGKME 121
Query: 181 ------------VILTNTLTTVLE------------PNP-----------AIGEAAKMCI 205
VI N LE P+ A+ EA + I
Sbjct: 122 EEGIFDVLPKKEVIQLNHERERLEKFLGGIKNMDKTPDALFVVDPRKERIAVNEARILGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P V IVD+NC+P+ I Y +PGNDD A++ + A+L+G++ +Q
Sbjct: 182 PVVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTETMANAVLEGRQGEQ 229
>gi|71275210|ref|ZP_00651497.1| Ribosomal protein S2, bacterial and organelle form [Xylella
fastidiosa Dixon]
gi|170731204|ref|YP_001776637.1| 30S ribosomal protein S2 [Xylella fastidiosa M12]
gi|238687956|sp|B0U5I9.1|RS2_XYLFM RecName: Full=30S ribosomal protein S2
gi|71164019|gb|EAO13734.1| Ribosomal protein S2, bacterial and organelle form [Xylella
fastidiosa Dixon]
gi|71728257|gb|EAO30438.1| Ribosomal protein S2, bacterial and organelle form [Xylella
fastidiosa subsp. sandyi Ann-1]
gi|167965997|gb|ACA13007.1| 30S ribosomal protein S2 [Xylella fastidiosa M12]
Length = 266
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 111/235 (47%), Gaps = 39/235 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ +M P I+G R I +L+++ L DA+NF++ +A +
Sbjct: 4 VTMRQMLEAGVHFGHQTRYRHPKMSPNIFGARGKIHIINLEKTVPLFNDAMNFLSAVAQK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G VLFVG I++ A+ C + W G TN + ++V RL +L +
Sbjct: 64 RGSVLFVGTKRSARDAIKEEAERCGMPYMIQRWLGGTLTNFRTVKQSVARLKELELAETD 123
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L +L + + N AI EA K+ IP
Sbjct: 124 GTFSKLVKHEVLRLRRESGKLQASLGGIKDMNRIPDAIFVIDIGHEDIAIKEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
V +VD+N +P+L+ YP+PGNDD A+Q Y + A+L+GK A + + + E+
Sbjct: 184 VAVVDTNYDPSLVDYPIPGNDDAIRAVQLYARAAADAVLEGKAAMPNAVAVREEE 238
>gi|320535430|ref|ZP_08035539.1| ribosomal protein S2 [Treponema phagedenis F0421]
gi|320147717|gb|EFW39224.1| ribosomal protein S2 [Treponema phagedenis F0421]
Length = 292
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 99/226 (43%), Gaps = 47/226 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K++ ++ VH GH++ D RMK YI+ R G I DL ++ +R+A + V
Sbjct: 3 VVTMKNLLESGVHFGHQVRRWDPRMKKYIFAERNGIHIIDLQKTITAIREAYDAVRKTMA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR--------- 176
VLFVG Q I K A+ C F W GM TN + +++ R
Sbjct: 63 DGKSVLFVGTKKQAQQTIAKEAERCGMFYVNNRWLGGMLTNFSTIKKSLGRLKRIEKMEV 122
Query: 177 ----------------------------------LPDLVILTNTLTTVLEPNPAIGEAAK 202
LP ++ + +T + AI EA K
Sbjct: 123 DGTFDSLTKKEIASLQKEKAKLEKNLGGIKEMKDLPGIIFIIDTRKETI----AINEARK 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
M IP + +VD+NCNP I YP+PGNDD AI + Q+ A+++
Sbjct: 179 MNIPIIAVVDTNCNPEGIDYPIPGNDDAIRAISLFTQIIANAVIEA 224
>gi|339503439|ref|YP_004690859.1| 30S ribosomal protein S2 [Roseobacter litoralis Och 149]
gi|338757432|gb|AEI93896.1| 30S ribosomal protein S2 [Roseobacter litoralis Och 149]
Length = 264
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM P+IYG R G I DL Q+ +L AL + + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMGPFIYGARNGIHIMDLTQTVPMLDQALQAIRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
+LFVG Q I A+ C ++ W G TN + + +++ RL
Sbjct: 68 SILFVGTKRQAQQPIADAAEKCAQYYMNHRWLGGTLTNWQTVSQSINRLKAIDEQSERGF 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + L A+ EA K+ IP
Sbjct: 128 EGLTKKERLGMERDQGKLQSSLGGIREMGGRPDLIFVIDVKKEAL----AVAEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V +VD+NC P+ I Y +PGNDD AI YC + A L G A+
Sbjct: 184 VVAVVDTNCPPDGIDYIIPGNDDASRAISLYCDLAARAALDGMSAQ 229
>gi|164687905|ref|ZP_02211933.1| hypothetical protein CLOBAR_01550 [Clostridium bartlettii DSM
16795]
gi|164602318|gb|EDQ95783.1| ribosomal protein S2 [Clostridium bartlettii DSM 16795]
Length = 241
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 39/225 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M YI+ R G I DL ++ + + +A NF+ IA
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKVEEAYNFMKEIAE 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
VLFVG Q I++ A+ C F W GM TN + + + +L +L
Sbjct: 63 TGKPVLFVGTKKQAQEAIKEEAERCGMFYVNERWLGGMLTNYKTIQTRIKKLRELEKMEE 122
Query: 181 -----------VILTNTLTTVLE-----------------------PNPAIGEAAKMCIP 206
VI L LE N AI EAA++ IP
Sbjct: 123 EGVFEVLPKKEVIKLRALKEKLEKNLNGIKEMPELPGAIFVVDPRKENIAIQEAARLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
VGIVD+NC+P+ + Y +PGNDD A++ TAI++G++
Sbjct: 183 VVGIVDTNCDPDELDYAIPGNDDAIRAVKLITGAMATAIIEGRQG 227
>gi|389580735|ref|ZP_10170762.1| ribosomal protein S2 [Desulfobacter postgatei 2ac9]
gi|389402370|gb|EIM64592.1| ribosomal protein S2 [Desulfobacter postgatei 2ac9]
Length = 289
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 110/239 (46%), Gaps = 43/239 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K++ +A VH GH+ + +MK YI+G R G I DL Q+ +L R A +F+ +IA
Sbjct: 4 ITIKELLEAGVHFGHQTKRWNPKMKRYIFGARNGIYIIDLQQTVKLYRQAHDFIKNIAAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
G VLFV Q S I + A + F W GM TN + + ++R L + N
Sbjct: 64 GGDVLFVATKKQASEAIYEEANRAESFYVENRWLGGMLTNFQTIKNNISRFHFLNSIEND 123
Query: 187 LTTVLEPNP-----------------------------------------AIGEAAKMCI 205
T LE P A+ EA ++ I
Sbjct: 124 GT--LENYPKKEQAKMLKDKAKLEFAIGGISNMKKLPAALFIIDSKNETIAVKEAKRLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQE 264
P V +VD+NC+P+ I Y +PGNDD +I+ + A+++G + ++ + S+K+E
Sbjct: 182 PIVAVVDTNCDPDDIDYVIPGNDDAIRSIRLFASRIADAVIEGHQIWEERQRADSDKEE 240
>gi|169830790|ref|YP_001716772.1| 30S ribosomal protein S2 [Candidatus Desulforudis audaxviator
MP104C]
gi|238688233|sp|B1I2K0.1|RS2_DESAP RecName: Full=30S ribosomal protein S2
gi|169637634|gb|ACA59140.1| ribosomal protein S2 [Candidatus Desulforudis audaxviator MP104C]
Length = 244
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 103/228 (45%), Gaps = 41/228 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M PYI+ R G I DL ++ + +A NF+ I
Sbjct: 3 IVTMKQLLEAGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTVRKIEEAYNFIKQIVA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL-------- 177
VLFVG Q L + + A C F + W GM TN + + R + RL
Sbjct: 63 EGQTVLFVGTKKQAQLTVVEEAGRCGMFYVNQRWLGGMLTNFQTIRRRIDRLKELEKMEA 122
Query: 178 -----------------------------PDLVILTNTLTTVLEPNP---AIGEAAKMCI 205
D+ L L V++P A+ EA K+ I
Sbjct: 123 EGRFEVLPKKEVAELMHEKQRLEKYLKGIKDMTKLPGAL-FVIDPRKERIAVAEARKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P V IVD+NC+P+ I Y +PGNDD A++ A+L+G++ +Q
Sbjct: 182 PIVAIVDTNCDPDEIDYIIPGNDDAIRAVRLLTSRMADAVLEGRQGEQ 229
>gi|433678501|ref|ZP_20510353.1| 30S ribosomal protein S2 [Xanthomonas translucens pv. translucens
DSM 18974]
gi|430816385|emb|CCP40843.1| 30S ribosomal protein S2 [Xanthomonas translucens pv. translucens
DSM 18974]
Length = 265
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 114/237 (48%), Gaps = 43/237 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ M YI+G R I +L+++ L DA+NF++ +A +
Sbjct: 4 VTMRQMLEAGVHFGHQCRYWHPNMAQYIFGARGKIHIINLEKTVPLFNDAMNFISSVAQK 63
Query: 127 DGIVLFVG--QSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI-- 182
G +LF+G +SA++S +++ A+ C + T+ W G TN + ++V RL +L
Sbjct: 64 RGTILFLGTKRSARDS--VKEEAERCGQPFMTQRWLGGTLTNFRTVKQSVARLKELEAAE 121
Query: 183 ----------------------LTNTLTTVLEPNP---------------AIGEAAKMCI 205
L +L + E N AI EA K+ I
Sbjct: 122 TDGTFDKLVKHEVLTLRREREKLLASLGGIKEMNRLPDALFVIDIGHEDIAIKEAKKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
P V +VD+N NP L+ Y +PGNDD A+Q Y + A+L+GK A + + E+
Sbjct: 182 PVVAVVDTNYNPALVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNAASVREEE 238
>gi|242624342|ref|YP_003002260.1| 30S ribosomal protein S2 [Aureoumbra lagunensis]
gi|239997450|gb|ACS36972.1| 30S ribosomal protein S2 [Aureoumbra lagunensis]
Length = 225
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 108/228 (47%), Gaps = 52/228 (22%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+K+ + +A VHLGHK + +M PYIY R G I DL Q+++LL++A ++V + +
Sbjct: 4 IKIAQLLEAGVHLGHKTARWNPKMFPYIYMERNGIHILDLVQTSQLLQEACDYVQSASEQ 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-----------------SEK 169
LFVG Q S +I++ A F W G+ TN E
Sbjct: 64 GKTFLFVGTKPQASEIIKEEALRANSFYVNHRWYGGLLTNWQTVKGRINTLITLEKEEET 123
Query: 170 LF-------------------------RAVTRLPDLVILTNTLTTVLEPN---PAIGEAA 201
LF + + R+PD++I V++ N AI EA
Sbjct: 124 LFATLPKKESANLRKELTKLQTQLNGIKEMDRIPDVMI-------VIDQNYELTAIREAI 176
Query: 202 KMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
K+ IP + ++DSNCNP+LI P+PGNDD ++I+ + +IL G+
Sbjct: 177 KLNIPIISLLDSNCNPDLIDVPIPGNDDAITSIKIILRALSDSILMGR 224
>gi|444921307|ref|ZP_21241144.1| 30S ribosomal protein S2 [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507666|gb|ELV07841.1| 30S ribosomal protein S2 [Wohlfahrtiimonas chitiniclastica SH04]
Length = 251
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 118/237 (49%), Gaps = 48/237 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM +A VH GH+ + +MK YI+G RQ I +L+++ L DA+N ++ IA +
Sbjct: 4 VTMRDMLEAGVHFGHQTRYWNPQMKTYIFGERQKIHIINLEKTMPLFEDAMNVISSIAAK 63
Query: 127 DGIVLFVG--QSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
+G VLFVG ++AQ + E T + Q + R W GM TN + + ++ RL ++
Sbjct: 64 NGRVLFVGTKRAAQEIVAAEAT-RAGQPYVDHR-WLGGMLTNFKTVKNSIKRLREIEAMK 121
Query: 181 -------------VILTNTLTTV-----------------------LEPNPAIGEAAKMC 204
++LT L + E N A+ EA KM
Sbjct: 122 ADGSIERLTKKEGILLTRELEKLERSLGGIKDMPSIPDALFVIDVGYEKN-AVAEARKMG 180
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSE 261
IP + +VD+N +P + Y +PGNDD AIQ Y Q A+++G+ + KL+SE
Sbjct: 181 IPVIAVVDTNNSPEGVDYVIPGNDDAIRAIQLYAQAAADAVIEGRGSNA---KLVSE 234
>gi|57238054|ref|YP_179303.1| 30S ribosomal protein S2 [Campylobacter jejuni RM1221]
gi|86150711|ref|ZP_01068927.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 260.94]
gi|121613320|ref|YP_001000857.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
81-176]
gi|148926187|ref|ZP_01809872.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
CG8486]
gi|157415446|ref|YP_001482702.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 81116]
gi|167005769|ref|ZP_02271527.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
81-176]
gi|205356206|ref|ZP_03222972.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
CG8421]
gi|315124648|ref|YP_004066652.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|384441805|ref|YP_005658108.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni M1]
gi|384443527|ref|YP_005659779.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni S3]
gi|384448425|ref|YP_005656476.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
IA3902]
gi|407942564|ref|YP_006858207.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni PT14]
gi|419618478|ref|ZP_14152019.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
129-258]
gi|419619616|ref|ZP_14153079.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 51494]
gi|419623287|ref|ZP_14156418.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
23218]
gi|419628544|ref|ZP_14161391.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
23263]
gi|419629074|ref|ZP_14161812.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 60004]
gi|419632061|ref|ZP_14164626.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
23264]
gi|419634133|ref|ZP_14166543.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
23269]
gi|419635175|ref|ZP_14167492.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 55037]
gi|419639090|ref|ZP_14171130.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 86605]
gi|419643251|ref|ZP_14175007.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni ATCC
33560]
gi|419644431|ref|ZP_14176013.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
9081]
gi|419645743|ref|ZP_14177225.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 53161]
gi|419647899|ref|ZP_14179251.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
9217]
gi|419649744|ref|ZP_14180980.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
2008-1025]
gi|419654403|ref|ZP_14185339.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
2008-872]
gi|419655486|ref|ZP_14186334.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
2008-988]
gi|419657938|ref|ZP_14188579.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
1997-1]
gi|419658966|ref|ZP_14189512.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
2008-979]
gi|419662605|ref|ZP_14192884.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
2008-831]
gi|419663514|ref|ZP_14193710.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
1997-4]
gi|419665260|ref|ZP_14195333.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
1997-7]
gi|419666576|ref|ZP_14196571.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
1997-10]
gi|419668692|ref|ZP_14198499.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
1997-11]
gi|419670527|ref|ZP_14200217.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
1997-14]
gi|419673089|ref|ZP_14202570.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 51037]
gi|419676112|ref|ZP_14205356.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
110-21]
gi|419676552|ref|ZP_14205722.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 87330]
gi|419679036|ref|ZP_14208061.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 87459]
gi|419680711|ref|ZP_14209566.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
140-16]
gi|419684925|ref|ZP_14213500.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 1577]
gi|419686930|ref|ZP_14215348.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 1798]
gi|419690769|ref|ZP_14218960.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 1893]
gi|419695380|ref|ZP_14223273.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
23210]
gi|419697737|ref|ZP_14225465.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
23211]
gi|424846305|ref|ZP_18270902.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni NW]
gi|424850246|ref|ZP_18274659.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni D2600]
gi|81675565|sp|Q5HTT2.1|RS2_CAMJR RecName: Full=30S ribosomal protein S2
gi|166225257|sp|A1W0G6.1|RS2_CAMJJ RecName: Full=30S ribosomal protein S2
gi|172047157|sp|A8FMN8.1|RS2_CAMJ8 RecName: Full=30S ribosomal protein S2
gi|57166858|gb|AAW35637.1| ribosomal protein S2 [Campylobacter jejuni RM1221]
gi|85841881|gb|EAQ59127.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 260.94]
gi|87249309|gb|EAQ72270.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 81-176]
gi|145845358|gb|EDK22451.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
CG8486]
gi|157386410|gb|ABV52725.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 81116]
gi|205345811|gb|EDZ32448.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
CG8421]
gi|284926406|gb|ADC28758.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
IA3902]
gi|307748088|gb|ADN91358.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni M1]
gi|315018370|gb|ADT66463.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|315058614|gb|ADT72943.1| SSU ribosomal protein S2p (SAe) [Campylobacter jejuni subsp. jejuni
S3]
gi|356486282|gb|EHI16267.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni NW]
gi|356486928|gb|EHI16901.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni D2600]
gi|380594732|gb|EIB15511.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
129-258]
gi|380601465|gb|EIB21776.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
23218]
gi|380602376|gb|EIB22649.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 51494]
gi|380603894|gb|EIB23942.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
23263]
gi|380608440|gb|EIB28233.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 60004]
gi|380609639|gb|EIB29292.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
23264]
gi|380610122|gb|EIB29738.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
23269]
gi|380613436|gb|EIB32919.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 55037]
gi|380617445|gb|EIB36617.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 86605]
gi|380622135|gb|EIB40903.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
9081]
gi|380622706|gb|EIB41447.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni ATCC
33560]
gi|380624701|gb|EIB43335.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 53161]
gi|380626912|gb|EIB45335.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
9217]
gi|380629775|gb|EIB48030.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
2008-1025]
gi|380631199|gb|EIB49404.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
2008-872]
gi|380634045|gb|EIB51957.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
1997-1]
gi|380636768|gb|EIB54437.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
2008-988]
gi|380637757|gb|EIB55367.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
2008-831]
gi|380640688|gb|EIB58134.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
2008-979]
gi|380642904|gb|EIB60153.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
1997-4]
gi|380643999|gb|EIB61205.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
1997-7]
gi|380647398|gb|EIB64314.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
1997-10]
gi|380648645|gb|EIB65488.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
1997-11]
gi|380650669|gb|EIB67291.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
1997-14]
gi|380650790|gb|EIB67401.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
110-21]
gi|380654627|gb|EIB70981.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 51037]
gi|380656078|gb|EIB72361.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 87330]
gi|380658534|gb|EIB74544.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 87459]
gi|380659813|gb|EIB75777.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni
140-16]
gi|380663253|gb|EIB78905.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 1798]
gi|380665711|gb|EIB81273.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 1577]
gi|380668115|gb|EIB83489.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 1893]
gi|380677135|gb|EIB92007.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
23211]
gi|380678595|gb|EIB93447.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
23210]
gi|407906402|gb|AFU43231.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni PT14]
Length = 263
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 48/244 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G + DL ++ R N V A
Sbjct: 1 MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+LFVG Q I++ A+ C W GM TN
Sbjct: 61 EGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEE 120
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + PD++ + +T+ + A+ EA +
Sbjct: 121 DGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKI----AVQEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK-QDTLKLLSE 261
+ IP V +D+NC+P+L+TYP+PGNDD ++Q +CQ AI +GK + QD L +E
Sbjct: 177 LRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALREQDGEALANE 236
Query: 262 KQEV 265
++E+
Sbjct: 237 EKEI 240
>gi|302690908|ref|XP_003035133.1| hypothetical protein SCHCODRAFT_81331 [Schizophyllum commune H4-8]
gi|300108829|gb|EFJ00231.1| hypothetical protein SCHCODRAFT_81331 [Schizophyllum commune H4-8]
Length = 430
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 89/188 (47%), Gaps = 12/188 (6%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+ + A H GH L+ PY YG R G I DLD + LLR A F +AYR G
Sbjct: 81 ISALLAAGAHFGHSTSRLNPNFMPYAYGTRGGITIIDLDHTLPLLRRATQFARSVAYRGG 140
Query: 129 IVLFVGQSAQNSLLIEKTAQDC---QEFAHTRFWRQGMFTNSEKL-----FRAVTRLPDL 180
+LF+G +++K A+ + W G TN + F+ LPDL
Sbjct: 141 QILFLGTRPDLRPVVQKAAERLGPGNGYYIADRWLPGTLTNRFSMLNPDDFKRYNLLPDL 200
Query: 181 VILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQV 240
V+L N + + AI E A +PT+GI+DSN +P L+ YP+P ND++ + V
Sbjct: 201 VVLLNPIQNAV----AIRELAVEHVPTIGIIDSNADPRLVMYPIPANDESTRVAEIIAGV 256
Query: 241 FKTAILKG 248
A +G
Sbjct: 257 ISIAAREG 264
>gi|88596393|ref|ZP_01099630.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 84-25]
gi|419636380|ref|ZP_14168578.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
9879]
gi|419688018|ref|ZP_14216347.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 1854]
gi|419691460|ref|ZP_14219578.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 1928]
gi|88191234|gb|EAQ95206.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 84-25]
gi|380617673|gb|EIB36836.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni LMG
9879]
gi|380666219|gb|EIB81766.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 1854]
gi|380672149|gb|EIB87327.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 1928]
Length = 263
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 48/244 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G + DL ++ R N V A
Sbjct: 1 MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+LFVG Q I++ A+ C W GM TN
Sbjct: 61 EGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEE 120
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + PD++ + +T+ + A+ EA +
Sbjct: 121 DGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKI----AVQEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK-QDTLKLLSE 261
+ IP V +D+NC+P+L+TYP+PGNDD ++Q +CQ AI +GK + QD L +E
Sbjct: 177 LRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALREQDGEALANE 236
Query: 262 KQEV 265
++E+
Sbjct: 237 EKEI 240
>gi|126731215|ref|ZP_01747022.1| 30S ribosomal protein S2 [Sagittula stellata E-37]
gi|126708126|gb|EBA07185.1| 30S ribosomal protein S2 [Sagittula stellata E-37]
Length = 255
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 100/229 (43%), Gaps = 46/229 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM +IYG R G I DL Q+ LL AL + ++G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMGEFIYGARNGIHIMDLTQTVPLLDQALQAIRDCVAKNG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q + I + A+ C ++ W G TN + + +++ RL
Sbjct: 68 RVLFVGTKRQAAQPIAEAAEKCAQYYMNHRWLGGTLTNWQTVSQSINRLRSIDEQMENGA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PD++ + + L A+ EA K+ IP
Sbjct: 128 EGLTKKERLNMERDQQKLQASLGGIREMGGVPDMLFVIDVKKEAL----AVAEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V IVD+NC+P+ I Y +PGNDD AI YC + A L G + +
Sbjct: 184 VVAIVDTNCSPDGIDYIIPGNDDAARAIALYCDLVSRAALDGMTGQMEA 232
>gi|342217968|ref|ZP_08710603.1| ribosomal protein S2 [Megasphaera sp. UPII 135-E]
gi|341592607|gb|EGS35492.1| ribosomal protein S2 [Megasphaera sp. UPII 135-E]
Length = 242
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 39/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +MK +I+ R G I DL ++ + +A NFV I
Sbjct: 3 VVSMKQLLEAGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQKTVKKTEEAYNFVRDIVA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
G +LFVG Q I+ A+ C +F W GM TN + + + V RL +L
Sbjct: 63 NGGKLLFVGTKKQAQDSIKSEAERCNQFFVNERWLGGMLTNFQTIEKRVKRLKELEKQEA 122
Query: 181 ------------VILTNTLTT-------------------VLEPNP---AIGEAAKMCIP 206
++L + + V++P A+ EA K+ IP
Sbjct: 123 DGIFDVLPKKEVILLKHEMEKLHRYLGGIKEMKKLPDALFVIDPKKEEIAVAEARKLHIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+ VD+NC+P+LI YP+P NDD A++ A+L+G + +Q
Sbjct: 183 IIATVDTNCDPDLIDYPIPANDDAIRAVKLLAGKIADAVLEGNQGEQ 229
>gi|424867597|ref|ZP_18291379.1| Ribosomal protein S2 [Leptospirillum sp. Group II 'C75']
gi|124516673|gb|EAY58181.1| ribosomal protein S2 [Leptospirillum rubarum]
gi|387221909|gb|EIJ76416.1| Ribosomal protein S2 [Leptospirillum sp. Group II 'C75']
Length = 274
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 108/239 (45%), Gaps = 42/239 (17%)
Query: 49 PEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQ 108
P NP RY + + V +K+M +A VH GH+ + +MK +IYG R G I DL Q
Sbjct: 4 PGKANP-RYEENVMID--VTLKEMLEAGVHFGHQTKRWNPKMKRFIYGERNGIYILDLQQ 60
Query: 109 SAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSE 168
+ R A F + G +LFVG Q +I++ AQ C + T W GM TN +
Sbjct: 61 TVRRFRVAREFAKSVVRNRGSILFVGTKRQAQPIIQQEAQRCGMYFVTERWLGGMLTNLQ 120
Query: 169 KLFRAVTRL---------------------------PDLVILTNTLTT---------VLE 192
+ ++V RL L + N + V++
Sbjct: 121 TVRKSVERLNKIEEMMESGQISRLPKKEVAQLEKEHEKLASILNGIRGLSHLPAAIFVVD 180
Query: 193 PNP---AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
P A+ EA ++ IP + +VD+NC+P++I +P+P NDD +I+ A+L G
Sbjct: 181 PKKEHIAVHEANRLGIPVIAMVDTNCDPDMIQFPIPSNDDAIRSIRLITAGIADAVLDG 239
>gi|442322846|ref|YP_007362867.1| 30S ribosomal protein S2 [Myxococcus stipitatus DSM 14675]
gi|441490488|gb|AGC47183.1| 30S ribosomal protein S2 [Myxococcus stipitatus DSM 14675]
Length = 324
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 39/221 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++ + +A VH GH+ + +MKPYI+G R G I DL ++ + R A FVA + R
Sbjct: 21 ITMRQLLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVSMARAAFRFVADVTAR 80
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
G VLFVG Q +I + A +F T W G TN + + + + RL L +
Sbjct: 81 GGSVLFVGTKKQAQDVIREEASRAGQFFVTSRWLGGTLTNFKTIKQGIDRLKTLEKMAED 140
Query: 187 LT------------------------------------TVLEPNP---AIGEAAKMCIPT 207
T V++P AI EA ++ IP
Sbjct: 141 GTFERLPKKEVASLEREREKLEKNLGGVKEMSKLPRCVFVIDPKKEHIAIHEATRLGIPV 200
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+G+VD+NC+P+ I + +PGNDD +I+ + A ++G
Sbjct: 201 IGLVDTNCDPDGIDFVIPGNDDAIRSIKLFTSKIAEACIEG 241
>gi|114765356|ref|ZP_01444473.1| 30S ribosomal protein S2 [Pelagibaca bermudensis HTCC2601]
gi|114542336|gb|EAU45365.1| 30S ribosomal protein S2 [Roseovarius sp. HTCC2601]
Length = 255
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 98/225 (43%), Gaps = 38/225 (16%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM +IYG R G I DL Q+ +L ALN + + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMGEFIYGARNGIHILDLTQTVPMLDAALNVIRETVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-------- 180
VLFVG Q + I + A+ C ++ W G TN + + +++ RL +
Sbjct: 68 RVLFVGTKRQAAQPIAEAAEKCAQYYMNHRWLGGTLTNWQTVSQSINRLKAIDEQMEAGA 127
Query: 181 ---------------VILTNTLTTVLEPNP---------------AIGEAAKMCIPTVGI 210
L +L + E AI EA K+ IP V I
Sbjct: 128 EGLTKKERLGMEREQAKLQASLGGIREMGGLPELLFVIDVKKEQLAIAEAKKLGIPVVAI 187
Query: 211 VDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
VD+NC+P + Y +PGNDD AI YC + A L G + +
Sbjct: 188 VDTNCSPEGVDYIIPGNDDAARAIALYCDLVSRAALDGMTGQMEA 232
>gi|86150353|ref|ZP_01068579.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni CF93-6]
gi|85839178|gb|EAQ56441.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni CF93-6]
Length = 262
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 48/244 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G + DL ++ R N V A
Sbjct: 1 MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+LFVG Q I++ A+ C W GM TN
Sbjct: 61 EGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEE 120
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + PD++ + +T+ + A+ EA +
Sbjct: 121 DGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKI----AVQEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK-QDTLKLLSE 261
+ IP V +D+NC+P+L+TYP+PGNDD ++Q +CQ AI +GK + QD L +E
Sbjct: 177 LRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALREQDGEALANE 236
Query: 262 KQEV 265
++E+
Sbjct: 237 EKEI 240
>gi|85059921|ref|YP_455623.1| 30S ribosomal protein S2 [Sodalis glossinidius str. 'morsitans']
gi|123766400|sp|Q2NRK7.1|RS2_SODGM RecName: Full=30S ribosomal protein S2
gi|84780441|dbj|BAE75218.1| 30S ribosomal protein S2 [Sodalis glossinidius str. 'morsitans']
Length = 241
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+Q+ L DAL + IA R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEQTVPLFNDALAELNKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVKEAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFEKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDAEHEHIAINEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD AI Y T + KG+
Sbjct: 184 FAIVDTNSDPDGVDFIIPGNDDAIRAINLYLTAVATTVRKGR 225
>gi|103487444|ref|YP_617005.1| 30S ribosomal protein S2 [Sphingopyxis alaskensis RB2256]
gi|123379689|sp|Q1GRQ0.1|RS2_SPHAL RecName: Full=30S ribosomal protein S2
gi|98977521|gb|ABF53672.1| SSU ribosomal protein S2P [Sphingopyxis alaskensis RB2256]
Length = 277
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 108/229 (47%), Gaps = 41/229 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++++ +A H GH+ + RMKPYI+G R G I DL Q+ L AL+F+A A
Sbjct: 5 VVTMQNLIEAGAHFGHQTHRWNPRMKPYIFGARNGIHILDLSQTVPLFARALDFIASTAA 64
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQ-DCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
G VLFVG Q I A+ Q F + R W GM TN + + ++ RL L
Sbjct: 65 SGGKVLFVGTKRQAQGPIADAARASGQHFVNHR-WLGGMLTNWKTISNSIKRLKTLEEQL 123
Query: 181 ----------VILTNT---------------------LTTVLEPNP---AIGEAAKMCIP 206
+L T + V++ N AI EA + IP
Sbjct: 124 SGDTSGLTKKEVLNKTRERDKLEMSLGGIRDMGGIPDVMFVIDANKEELAIKEANVLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQ-VFKTAILKGKKAKQD 254
V I+DSN +P+ I +PVP NDD AI+ YC V + A G++A+ D
Sbjct: 184 VVAILDSNVSPDGIAFPVPANDDAARAIRLYCDAVAQAATRGGQQARAD 232
>gi|421498360|ref|ZP_15945478.1| 30S ribosomal protein S2 [Aeromonas media WS]
gi|407182661|gb|EKE56600.1| 30S ribosomal protein S2 [Aeromonas media WS]
Length = 237
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 39/220 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++DM A VH GH+ + +MK YI+G R I +L+++ + DA+NF++ +A + G
Sbjct: 1 MRDMLQAGVHFGHQTRYWNPKMKSYIFGARSKVHIINLEKTVPMFDDAMNFISSVAAKKG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-------- 180
VLFVG S +++ A+ C +F W GM TN + + +++ RL DL
Sbjct: 61 KVLFVGTKRAASEAVKEAAERCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120
Query: 181 --------VILTNTLTTVLEPN-----------------------PAIGEAAKMCIPTVG 209
++ LE + AI EA + IP V
Sbjct: 121 FDKLTKKEALMRTREMDKLEKSLGGIKNMGGLPDVLFVVDADHEHIAIKEANNLGIPVVS 180
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N NP+ + Y +PGNDD A+Q Y +L+ +
Sbjct: 181 IVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAAADTVLEAR 220
>gi|283954740|ref|ZP_06372256.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 414]
gi|283793580|gb|EFC32333.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni 414]
Length = 248
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 48/244 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G + DL ++ R N V A
Sbjct: 1 MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+LFVG Q I++ A+ C W GM TN
Sbjct: 61 EGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEE 120
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + PD++ + +T+ + A+ EA +
Sbjct: 121 DGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKI----AVQEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK-QDTLKLLSE 261
+ IP V +D+NC+P+L+TYP+PGNDD ++Q +CQ AI +GK + QD L +E
Sbjct: 177 LRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALREQDGEALSNE 236
Query: 262 KQEV 265
++E+
Sbjct: 237 EKEI 240
>gi|359400214|ref|ZP_09193203.1| small subunit ribosomal protein S2 [Novosphingobium
pentaromativorans US6-1]
gi|357598454|gb|EHJ60183.1| small subunit ribosomal protein S2 [Novosphingobium
pentaromativorans US6-1]
Length = 301
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 104/224 (46%), Gaps = 40/224 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++ + +A H GH+ + RMKPYI+G R G I DL Q+ L+ AL+FV+
Sbjct: 52 VVTMQQLIEAGAHFGHQTHRWNPRMKPYIFGARNGIHIIDLSQTVPLMARALDFVSATVQ 111
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDC-QEFAHTRFWRQGMFTNSEKLFRAVTRL----PDL 180
G VLFVG Q I + A+ C Q F + R W GM TN + + +++ R L
Sbjct: 112 AGGKVLFVGTKRQAQEPIAQAARACGQHFVNHR-WLGGMLTNWKTISQSIKRFKALEEQL 170
Query: 181 VILTNTLTT-------------------------------VLEPNP---AIGEAAKMCIP 206
T LT V++ N AI EA + IP
Sbjct: 171 AGDTAGLTKKEVLQLTRERDKLELSLGGIRDMGGIPDVMFVIDANKEDLAIKEANTLGIP 230
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
V ++D+N +P I +P+PGNDD A++ YC+ A KG +
Sbjct: 231 VVAVLDTNVSPEGIAFPIPGNDDASRAVRLYCEAIAQAATKGGQ 274
>gi|209573724|sp|B2IGT0.2|RS2_BEII9 RecName: Full=30S ribosomal protein S2
Length = 336
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 96/222 (43%), Gaps = 46/222 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + ++ H GH+ + +M PYI+G R I DL Q+ LL AL ++ R G
Sbjct: 8 MRGLLESGAHFGHQAHRWNPKMAPYIFGARNNIHIIDLAQTVPLLHQALKAISDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q I AQ ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQAQEAIADAAQRSAQYYVNSRWLGGMLTNWKTISASIQRLRKLDEILASGA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T L AI EA ++ IP
Sbjct: 128 GGLTKKERLMMSRERDKLEKALGGIKDMGGVPDLIFVIDTNKEQL----AIQEAERLHIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
I+D+NC+P+ ITYP+PGNDD AI YC + A L G
Sbjct: 184 VAAILDTNCDPDGITYPIPGNDDAGRAISLYCDLIARAALDG 225
>gi|188577162|ref|YP_001914091.1| 30S ribosomal protein S2 [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188521614|gb|ACD59559.1| ribosomal protein S2 [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 262
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 108/233 (46%), Gaps = 39/233 (16%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ M +A VH GH+ M YI+G R I +L+++ L DA+N+++ IA + G
Sbjct: 1 MRQMLEAGVHFGHQCRYWHPNMAQYIFGARGKIHIINLEKTVPLFNDAMNYLSSIAQKRG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI------ 182
+LF+G I++ A+ C T+ W G TN + ++V RL +L
Sbjct: 61 TILFLGTKRSARASIKEEAERCGMPFMTQRWLGGTLTNFRTVKQSVARLKELEAAETDGT 120
Query: 183 ------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPTVG 209
L +L + E N AI EA K+ IP +
Sbjct: 121 FDKLVKHEVLSLRREREKLDASLGGIKEMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIA 180
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+VD+N NPNL+ Y +PGNDD A+Q Y + A+L+GK A ++ + E+
Sbjct: 181 VVDTNYNPNLVDYAIPGNDDAIRAVQLYARAAADAVLEGKAAAPNSASVREEE 233
>gi|237808856|ref|YP_002893296.1| 30S ribosomal protein S2 [Tolumonas auensis DSM 9187]
gi|259495227|sp|C4L864.1|RS2_TOLAT RecName: Full=30S ribosomal protein S2
gi|237501117|gb|ACQ93710.1| ribosomal protein S2 [Tolumonas auensis DSM 9187]
Length = 242
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 39/218 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + DALN+++ +A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRFWNPKMKPFIFGARNNVHIINLEKTVPMFDDALNYLSSVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG + +++ A +C++F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAATEAVKEAAANCEQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSLD 123
Query: 183 --------------------LTNTLTTVLE---------------PNPAIGEAAKMCIPT 207
L +L + + + AI EA + IP
Sbjct: 124 GTFEKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDVLFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAI 245
V IVD+N NP+ + Y +PGNDD A+Q Y +I
Sbjct: 184 VSIVDTNSNPDGVDYIIPGNDDAIRAVQLYLNAAADSI 221
>gi|182679184|ref|YP_001833330.1| 30S ribosomal protein S2 [Beijerinckia indica subsp. indica ATCC
9039]
gi|182635067|gb|ACB95841.1| ribosomal protein S2 [Beijerinckia indica subsp. indica ATCC 9039]
Length = 361
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 96/222 (43%), Gaps = 46/222 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + ++ H GH+ + +M PYI+G R I DL Q+ LL AL ++ R G
Sbjct: 33 MRGLLESGAHFGHQAHRWNPKMAPYIFGARNNIHIIDLAQTVPLLHQALKAISDTVARGG 92
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q I AQ ++ W GM TN + + ++ RL
Sbjct: 93 RVLFVGTKRQAQEAIADAAQRSAQYYVNSRWLGGMLTNWKTISASIQRLRKLDEILASGA 152
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T L AI EA ++ IP
Sbjct: 153 GGLTKKERLMMSRERDKLEKALGGIKDMGGVPDLIFVIDTNKEQL----AIQEAERLHIP 208
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
I+D+NC+P+ ITYP+PGNDD AI YC + A L G
Sbjct: 209 VAAILDTNCDPDGITYPIPGNDDAGRAISLYCDLIARAALDG 250
>gi|297568945|ref|YP_003690289.1| 30S ribosomal protein S2 [Desulfurivibrio alkaliphilus AHT2]
gi|296924860|gb|ADH85670.1| ribosomal protein S2 [Desulfurivibrio alkaliphilus AHT2]
Length = 255
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 107/239 (44%), Gaps = 39/239 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K+M +A +H GH+ + +MKPYI+G R G I +LD++ L A + IA +
Sbjct: 4 VNMKEMLEAGLHFGHQTRRWNPKMKPYIFGARNGIYIINLDKTLPLFNKACDAARDIAAK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G +LFVG Q +I + A C F W GM TN + + ++V RL
Sbjct: 64 GGNILFVGTKRQAQEIIREEATRCGMFYVDHRWLGGMLTNHQTIKKSVDRLKAYTSMQED 123
Query: 181 ----------VILTNTLTTVLEPN-----------------------PAIGEAAKMCIPT 207
+++ T LE N A+ EA ++ IP
Sbjct: 124 GSINRYKKKEILMIQKETIKLERNLGGIKEMKTLPAAIFVVDPKRESIAVTEANRLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEVQ 266
I D+NC+P I + +PGNDD +I+ AIL GK++ + ++KQE +
Sbjct: 184 FAIADTNCDPEGINHLIPGNDDAIKSIRLVSAKLADAILDGKESHTAAQQAAADKQEAE 242
>gi|15965248|ref|NP_385601.1| 30S ribosomal protein S2 [Sinorhizobium meliloti 1021]
gi|334316040|ref|YP_004548659.1| 30S ribosomal protein S2 [Sinorhizobium meliloti AK83]
gi|384529208|ref|YP_005713296.1| 30S ribosomal protein S2 [Sinorhizobium meliloti BL225C]
gi|384536510|ref|YP_005720595.1| 30S ribosomal protein S2 [Sinorhizobium meliloti SM11]
gi|407720436|ref|YP_006840098.1| 30S ribosomal protein S2 [Sinorhizobium meliloti Rm41]
gi|418404188|ref|ZP_12977656.1| 30S ribosomal protein S2 [Sinorhizobium meliloti CCNWSX0020]
gi|433613266|ref|YP_007190064.1| ribosomal protein S2, bacterial type [Sinorhizobium meliloti GR4]
gi|25009215|sp|Q92Q55.1|RS2_RHIME RecName: Full=30S ribosomal protein S2
gi|15074428|emb|CAC46074.1| Probable 30S ribosomal protein S2 [Sinorhizobium meliloti 1021]
gi|333811384|gb|AEG04053.1| ribosomal protein S2 [Sinorhizobium meliloti BL225C]
gi|334095034|gb|AEG53045.1| ribosomal protein S2 [Sinorhizobium meliloti AK83]
gi|336033402|gb|AEH79334.1| 30S ribosomal protein S2 [Sinorhizobium meliloti SM11]
gi|359501843|gb|EHK74437.1| 30S ribosomal protein S2 [Sinorhizobium meliloti CCNWSX0020]
gi|407318668|emb|CCM67272.1| 30S ribosomal protein S2 [Sinorhizobium meliloti Rm41]
gi|429551456|gb|AGA06465.1| ribosomal protein S2, bacterial type [Sinorhizobium meliloti GR4]
Length = 255
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 101/227 (44%), Gaps = 46/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MKPYI+G R I DL Q+ +L AL V+ G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNVHIIDLAQTVPMLSRALQVVSDTVASGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S +I A+ ++ W GM TN
Sbjct: 68 RVLFVGTKRQASEIIADAAKRSAQYYVNARWLGGMMTNWKTISNSIQRLRKLDEILASEA 127
Query: 167 --------------SEKLFRAVTRL------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL RA+ + PDL+ + +T + AI EA ++ IP
Sbjct: 128 SGFTKKERLNLEREREKLNRALGGIRDMGGTPDLMFIIDTNKESI----AIDEAKRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V ++DSNC+P+ I Y +PGNDD AI YC + A + G +Q
Sbjct: 184 VVAVIDSNCDPDQIDYAIPGNDDASRAIALYCDLIARAAIDGIARQQ 230
>gi|328543711|ref|YP_004303820.1| 30S ribosomal protein S2 [Polymorphum gilvum SL003B-26A1]
gi|326413455|gb|ADZ70518.1| 30S ribosomal protein S2 [Polymorphum gilvum SL003B-26A1]
Length = 266
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 102/240 (42%), Gaps = 47/240 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM PYI+GVR I DL Q+ LL AL V+ G
Sbjct: 8 MRQLLEAGVHFGHQKHRWNPRMAPYIFGVRNDIHIIDLAQTVPLLHQALKAVSDTVAGGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VL VG Q + A++ ++ W GM TN
Sbjct: 68 RVLLVGTKRQAQESVAGAARNSAQYFVNARWLGGMLTNWKTISGSIQRLRKLEETLSTDA 127
Query: 167 ------SEKLFRAVTR---------------LPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
E+LF R LPDL+ + +T + AI EA ++ I
Sbjct: 128 AGLLTKKERLFMDREREKLERNLGGIKDMGGLPDLIFVIDTNREAI----AIQEARRLGI 183
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEV 265
P I+DSNC+P+ ITYPVPGNDD AI YC + A + G Q + + EV
Sbjct: 184 PVAAILDSNCDPDGITYPVPGNDDAGRAITLYCDLIARAAIDGISRAQGNMGMDIGASEV 243
>gi|148676436|gb|EDL08383.1| mitochondrial ribosomal protein S2, isoform CRA_b [Mus musculus]
Length = 211
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 74/112 (66%)
Query: 33 PLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKP 92
P+P+ S + D Q + PL++ D+F V+ L VK +F+A+VHLGHK G M+P
Sbjct: 88 PVPAVSEPQDGDDFQSRILDTPLQHSDFFNVKELFSVKSLFEARVHLGHKAGCRHRFMEP 147
Query: 93 YIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIE 144
YI+G R GQ I DLDQ+A L+ ALNF AH+AYR GI+LFV ++ Q S L E
Sbjct: 148 YIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYRKGIILFVSRNRQFSHLAE 199
>gi|338813313|ref|ZP_08625442.1| 30S ribosomal protein S2 [Acetonema longum DSM 6540]
gi|337274672|gb|EGO63180.1| 30S ribosomal protein S2 [Acetonema longum DSM 6540]
Length = 236
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 39/228 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +M PYI+ R G I DL ++ + + +A NFV +A
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEEAYNFVREVA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
+LFVG Q +++ A C + W GM TN + + R + RL +L
Sbjct: 62 GEGATILFVGTKKQAQEAVKEEATRCDMYYVNERWLGGMLTNFQTIQRRINRLRELENME 121
Query: 181 ------VILTNTLTT--------------------------VLEPNP---AIGEAAKMCI 205
V+ + T V++P A+ EA K+ I
Sbjct: 122 TQGLFEVLPKKEVITLRHEMDRLQKFLGGIKNMNRLPGALFVIDPRKERIAVAEARKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P V IVD+NC+P+ + Y +PGNDD A++ AIL+G++ +Q
Sbjct: 182 PIVAIVDTNCDPDEVDYVIPGNDDAIRAVKLLTGKVADAILEGRQGEQ 229
>gi|333997813|ref|YP_004530425.1| 30S ribosomal protein S2 [Treponema primitia ZAS-2]
gi|333738330|gb|AEF83820.1| ribosomal protein S2 [Treponema primitia ZAS-2]
Length = 306
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 101/226 (44%), Gaps = 47/226 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K++ ++ VH GH++ D RMK YI+ R G I DL ++ + ++DA + V
Sbjct: 13 VVTMKNLLESGVHFGHQVKRWDPRMKKYIFAERNGIHIIDLQKTIQAIKDAYDAVRKTVA 72
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------S 167
VLFVG Q I+K A+ C F W GM TN
Sbjct: 73 AGKTVLFVGTKKQAQQAIQKEAERCGMFYVNNRWLGGMLTNFVTIKKSLLRLKKLEKMEV 132
Query: 168 EKLFRAVTRL-------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
+ F +T+ P ++ + +T + A+ EA +
Sbjct: 133 DGTFENLTKKEIASLGKERAKLQKNLGGIKEMKDPPGILFIIDTRKEAI----AVAEAER 188
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
M IP V +VD+NCNP ITYP+PGNDD AI + Q+ A+++
Sbjct: 189 MGIPIVAVVDTNCNPEGITYPIPGNDDAIRAITLFTQIVANAVVEA 234
>gi|295689597|ref|YP_003593290.1| 30S ribosomal protein S2 [Caulobacter segnis ATCC 21756]
gi|295431500|gb|ADG10672.1| ribosomal protein S2 [Caulobacter segnis ATCC 21756]
Length = 274
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 100/227 (44%), Gaps = 46/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A H GH+ + +M YI+G R I DL Q+ LL AL V +A G
Sbjct: 8 MRQLLEAGAHFGHQTHRWNPKMDRYIFGSRSNIHIIDLSQTIPLLHQALVKVREVAAAGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S + A+ C ++ W G TN + ++ RL
Sbjct: 68 RVLFVGTKRQASDPVATAAKRCAQYYVNHRWLGGTLTNWRTVSGSIARLRELEGVLAGEA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PD++ + +T + AI EA K+ IP
Sbjct: 128 QGRSKKELLQLTRERDKLELSLGGIKDMGGIPDIMFVIDTNKEAI----AILEARKLNIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V I+D+NC+P+ ITYP+PGNDD A+Q YC + A+L G A Q
Sbjct: 184 VVAILDTNCDPDGITYPIPGNDDAARALQLYCDLIADAVLDGLAAGQ 230
>gi|108758377|ref|YP_633494.1| 30S ribosomal protein S2 [Myxococcus xanthus DK 1622]
gi|122980824|sp|Q1D1H9.1|RS2_MYXXD RecName: Full=30S ribosomal protein S2
gi|108462257|gb|ABF87442.1| ribosomal protein S2 [Myxococcus xanthus DK 1622]
Length = 312
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 39/221 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++ + +A VH GH+ + +MKP+I+G R G I DL ++ + R A FVA I R
Sbjct: 7 ITMRQLLEAGVHFGHQTKRWNPKMKPFIFGARNGIYIIDLQKTVVMARSAFRFVADITAR 66
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
G VLFVG Q ++ + A +F T W G TN + + + + RL L +
Sbjct: 67 GGSVLFVGTKKQAQDVVREEASRAGQFFVTSRWLGGTLTNFKTIKQGIDRLKTLEKMAED 126
Query: 187 LT------------------------------------TVLEPNP---AIGEAAKMCIPT 207
T V++P AI EA ++ IP
Sbjct: 127 GTFERLPKKEVAQLEREREKLEKNLGGVKEMSKLPRCVFVIDPKKEHIAIHEAGRLGIPV 186
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+G+VD+NC+P+ I + +PGNDD +I+ + A L+G
Sbjct: 187 IGLVDTNCDPDGIDFVIPGNDDAIRSIKLFTSKIAEACLEG 227
>gi|254798681|ref|YP_003058331.1| ribosomal protein S2 [Parachlorella kessleri]
gi|229915629|gb|ACQ90972.1| ribosomal protein S2 [Parachlorella kessleri]
Length = 282
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 39/220 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++DM + +H GH + RM PYIYG + G+ + DL Q+ LL+ LNF+ A +
Sbjct: 7 LEDMIKSGMHFGHFTHEWNPRMAPYIYGEKNGRHVLDLVQTHYLLKQVLNFIEESAAQGK 66
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
LFVG Q + LI KTA C F + W GM TN
Sbjct: 67 TFLFVGTKKQAAPLIAKTALACNSFYVNQRWLGGMLTNWRTIQKSLRKLDEYRQAEQRGD 126
Query: 167 ---------------SEKLFRAVTRLPDLVILTNTLTTVLEPNP--AIGEAAKMCIPTVG 209
++L + + L ++ L + + +P A+ E ++ IPT+
Sbjct: 127 WNFLKKQEVARKKREKQRLEKYLAGLENMNQLPGVVIIIGQPEEIHAVRECRQLAIPTIT 186
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
++DSNC+P L + +P NDD+ SA++ +F+ +IL G+
Sbjct: 187 LLDSNCDPTLADWYIPANDDSVSALRVILDLFENSILSGQ 226
>gi|162007985|ref|YP_457642.2| 30S ribosomal protein S2 [Erythrobacter litoralis HTCC2594]
gi|209573716|sp|Q2NBU6.2|RS2_ERYLH RecName: Full=30S ribosomal protein S2
Length = 245
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 103/220 (46%), Gaps = 40/220 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ + +A H GH+ + RMKPYI+G R G I DL Q+ L+ AL+FV A
Sbjct: 6 VTMQQLIEAGSHFGHQTHRWNPRMKPYIFGARNGVHIIDLSQTVPLMARALDFVHATANA 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDC-QEFAHTRFWRQGMFTNSEKLFRAVTRLPD----LV 181
G VLFVG Q I + A+ Q F + R W GM TN + + +++ L L
Sbjct: 66 GGKVLFVGTKRQAQEPIAEAARSSGQHFVNHR-WLGGMLTNWQTISKSIKELKSLEEQLS 124
Query: 182 ILTNTLT-------------------------------TVLEPNP---AIGEAAKMCIPT 207
T+ LT V++ N AI EA + IP
Sbjct: 125 GETHGLTKKEVLNLTRKRDKLELSLGGIRDMGGVPDVMVVIDANKEDLAIKEANVLGIPV 184
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILK 247
VGI+D+N +P+ I +PVPGNDD A++ YC F A K
Sbjct: 185 VGILDTNVDPSGIAFPVPGNDDAARAVRLYCDAFAQAASK 224
>gi|254466088|ref|ZP_05079499.1| ribosomal protein S2 [Rhodobacterales bacterium Y4I]
gi|206686996|gb|EDZ47478.1| ribosomal protein S2 [Rhodobacterales bacterium Y4I]
Length = 257
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 99/226 (43%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM P+IYG R G I DL Q+ +L AL V + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMSPFIYGARNGIHIMDLTQTVPMLDQALQVVRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q + + + A+ ++ W G TN + + +++ RL
Sbjct: 68 RVLFVGTKRQAAGPVAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSINRLKEIDEKMAGGA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + L AI EA K+ IP
Sbjct: 128 EGLTKKERLGMERDQEKLQASLGGIREMGGVPDLLFVIDVKKEAL----AIAEAKKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V +VD+NC+P+ + Y +PGNDD AI YC + A L G A+
Sbjct: 184 VVAVVDTNCSPDGVDYIIPGNDDASRAISLYCDLVARAALDGMSAQ 229
>gi|270290324|ref|ZP_06196549.1| 30S ribosomal protein S2 [Pediococcus acidilactici 7_4]
gi|270281105|gb|EFA26938.1| 30S ribosomal protein S2 [Pediococcus acidilactici 7_4]
Length = 261
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 39/229 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +MKP+I+ R G I DL ++ +L+ +A NFV +A
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKPFIFTERNGIYIIDLQKTVKLIDNAYNFVKDVA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
DG+VLFVG Q IE+ A+ +F W G TN + + + RL DL
Sbjct: 62 ANDGVVLFVGTKKQAQTAIEEEAKRAGQFYVNHRWLGGTLTNWNTIQKRIKRLKDLKKME 121
Query: 181 ------------VILTNTLTTVLEP------------------NP-----AIGEAAKMCI 205
V L N LE +P AI EA K+ I
Sbjct: 122 EDGTFDRLPKKEVALLNKQKDKLEKFLGGIEDMPHIPDVLFVVDPRKEQIAIKEAQKLNI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
P V +VD+N +P+ + +P NDD AI+ A+++G++ + D
Sbjct: 182 PVVAMVDTNTDPDQVDVIIPSNDDAIRAIRLITSKMADAVVEGRQGEDD 230
>gi|392307304|ref|ZP_10269838.1| 30S ribosomal protein S2 [Pseudoalteromonas citrea NCIMB 1889]
Length = 242
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + DAL F+ + A
Sbjct: 4 VSMRDMLQAGVHFGHQARYWNPKMKPFIFGARNRVHIINLEKTVPMFNDALKFLQNAASN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G +LFVG S ++++A ++F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVKESALQSEQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 181 -----------VILTNTLTTVLE-----------PNP-----------AIGEAAKMCIPT 207
++LT + + + P+ AI EA + IP
Sbjct: 124 GTFEKLTKKEALMLTREMEKLEKSLGGIKDMGGLPDAIFVIDADHEHIAIREANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V +VD+N NP+ + + +PGNDD AIQ Y TAI +G+++
Sbjct: 184 VSVVDTNSNPDGVDFIIPGNDDAIRAIQLYTGAVATAITEGRES 227
>gi|56696849|ref|YP_167211.1| 30S ribosomal protein S2 [Ruegeria pomeroyi DSS-3]
gi|61215365|sp|Q5LRZ4.1|RS2_SILPO RecName: Full=30S ribosomal protein S2
gi|56678586|gb|AAV95252.1| ribosomal protein S2 [Ruegeria pomeroyi DSS-3]
Length = 257
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 99/226 (43%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM P+IYG R G I DL Q+ +L AL V + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMSPFIYGARNGIHILDLTQTVPMLDQALKAVRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S I + A+ ++ W G TN + + +++ RL
Sbjct: 68 RVLFVGTKRQASGPIAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSIQRLRMIDEKMEGGA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + L AI EA K+ IP
Sbjct: 128 EGLTKKERLGMERDQAKLQASLGGIREMGGVPDLLFVIDVKKEAL----AIAEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V +VD+NC+P+ + Y +PGNDD AI YC + A L G A+
Sbjct: 184 VVAVVDTNCSPDGVDYIIPGNDDAARAISLYCDLAARAALDGMTAQ 229
>gi|341614905|ref|ZP_08701774.1| 30S ribosomal protein S2 [Citromicrobium sp. JLT1363]
Length = 251
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 101/224 (45%), Gaps = 48/224 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ + +A H GH+ + RMKPYI+G R G I DL Q+ L+ AL+FVA A
Sbjct: 6 VTMQQLIEAGAHFGHQTHRWNPRMKPYIFGARNGVHIIDLSQTVPLMARALDFVASTAQG 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQ-DCQEFAHTRFWRQGMFTNSEKLFRAVTRL-------- 177
G VLFVG Q + + A+ Q F + R W GM TN + + ++ RL
Sbjct: 66 GGKVLFVGTKRQAQEPVAEAARMAGQHFVNHR-WLGGMLTNWKTISGSIKRLKTLEEQLS 124
Query: 178 ----------------------------------PDLVILTNTLTTVLEPNPAIGEAAKM 203
PD++I+ + L AI EA +
Sbjct: 125 GDTGGLTKKEVLNLTRERDKLELSLGGIRDMGGIPDVMIVIDANKEDL----AIKEANVL 180
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILK 247
IP V ++DSN +P I +PVPGNDD A++ YC F A K
Sbjct: 181 GIPVVAVLDSNTDPTGIAFPVPGNDDASRAVRLYCDAFGEAARK 224
>gi|338536535|ref|YP_004669869.1| 30S ribosomal protein S2 [Myxococcus fulvus HW-1]
gi|337262631|gb|AEI68791.1| 30S ribosomal protein S2 [Myxococcus fulvus HW-1]
Length = 323
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 100/221 (45%), Gaps = 39/221 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++ + +A VH GH+ + +MKP+I+G R G I DL ++ L R A FVA I R
Sbjct: 19 ITMRQLLEAGVHFGHQTKRWNPKMKPFIFGARNGIYIIDLQKTVVLARSAFRFVADITAR 78
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG Q ++ + A +F T W G TN + + + + RL L
Sbjct: 79 GGSVLFVGTKKQAQDVVREEAARAGQFFVTSRWLGGTLTNFKTIKQGIDRLKTLEKMAED 138
Query: 181 ------------------VILTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L L V E N AI EA ++ IP
Sbjct: 139 GTFERLPKKEVAQLEREREKLEKNLGGVKEMNKLPRCVFVIDPKKEHIAIHEAGRLGIPV 198
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+G+VD+NC+P+ I + +PGNDD +I+ + + L+G
Sbjct: 199 IGLVDTNCDPDGIDFVIPGNDDAIRSIKLFTSKIAESCLEG 239
>gi|312143679|ref|YP_003995125.1| 30S ribosomal protein S2 [Halanaerobium hydrogeniformans]
gi|311904330|gb|ADQ14771.1| ribosomal protein S2 [Halanaerobium hydrogeniformans]
Length = 252
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 47/231 (20%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + ++ VH GH+ + +M+PYI+ R G I DL Q+ +L+ A NFV A
Sbjct: 2 SVVNMKQLLESGVHFGHQTKRWNPKMEPYIFTERNGIYIIDLQQTVKLIDKAYNFVKEEA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR-------- 176
VLFVG Q ++K A+ C + W GM TN + + + R
Sbjct: 62 AEGKKVLFVGTKRQAQETVKKEAERCGMPYVNQRWLGGMLTNYHTIKKRIDRLDELEEME 121
Query: 177 -----------------------------------LPDLVILTNTLTTVLEPNPAIGEAA 201
LPD++ +T+ + + A+ EA
Sbjct: 122 EEGIFEVLPKKEVIELNKEHDKLERFLGGIRNMNGLPDVIFITDA----KKEDIAVKEAI 177
Query: 202 KMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
K+ IP V I+D+NC+P+LI Y +PGNDD A++ V A+L GK+ +
Sbjct: 178 KLDIPIVSILDTNCDPDLIDYVIPGNDDAIRAVKLITSVISDAVLAGKQGR 228
>gi|145300061|ref|YP_001142902.1| 30S ribosomal protein S2 [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418357897|ref|ZP_12960586.1| 30S ribosomal protein S2 [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|166225236|sp|A4SQI2.1|RS2_AERS4 RecName: Full=30S ribosomal protein S2
gi|142852833|gb|ABO91154.1| ribosomal protein S2 [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356688809|gb|EHI53358.1| 30S ribosomal protein S2 [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 242
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MK YI+G R I +L+++ + DA+NF++ +A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKSYIFGARSKVHIINLEKTVPMFDDAMNFISSVAAK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG S ++ A C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKVLFVGTKRAASEAVKDAAGRCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 181 ----------VILTNTLTTVLEPN-----------------------PAIGEAAKMCIPT 207
++ LE + AI EA + IP
Sbjct: 124 GTFEKLTKKEALMRTREMDKLEKSLGGIKNMGGLPDVLFVVDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
V IVD+N NP+ + Y +PGNDD A+Q Y +L+ +
Sbjct: 184 VSIVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAAADTVLEAR 225
>gi|15839169|ref|NP_299857.1| 30S ribosomal protein S2 [Xylella fastidiosa 9a5c]
gi|28199827|ref|NP_780141.1| 30S ribosomal protein S2 [Xylella fastidiosa Temecula1]
gi|182682578|ref|YP_001830738.1| 30S ribosomal protein S2 [Xylella fastidiosa M23]
gi|386083912|ref|YP_006000194.1| 30S ribosomal protein S2 [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|417559015|ref|ZP_12209969.1| Ribosomal protein S2 [Xylella fastidiosa EB92.1]
gi|54039457|sp|P66547.1|RS2_XYLFT RecName: Full=30S ribosomal protein S2
gi|54041957|sp|P66546.1|RS2_XYLFA RecName: Full=30S ribosomal protein S2
gi|238691116|sp|B2I9U3.1|RS2_XYLF2 RecName: Full=30S ribosomal protein S2
gi|9107797|gb|AAF85377.1|AE004065_2 30S ribosomal protein S2 [Xylella fastidiosa 9a5c]
gi|28057948|gb|AAO29790.1| 30S ribosomal protein S2 [Xylella fastidiosa Temecula1]
gi|71732029|gb|EAO34086.1| Ribosomal protein S2, bacterial and organelle form [Xylella
fastidiosa subsp. sandyi Ann-1]
gi|182632688|gb|ACB93464.1| ribosomal protein S2 [Xylella fastidiosa M23]
gi|307578859|gb|ADN62828.1| 30S ribosomal protein S2 [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|338178283|gb|EGO81274.1| Ribosomal protein S2 [Xylella fastidiosa EB92.1]
Length = 266
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 110/235 (46%), Gaps = 39/235 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ +M P I+G R I +L+++ L DA+NF++ +A +
Sbjct: 4 VTMRQMLEAGVHFGHQTRYRHPKMSPNIFGARGKIHIINLEKTVPLFNDAMNFLSAVAQK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G VLFVG I++ A+ C + W G TN + ++V RL +L +
Sbjct: 64 RGSVLFVGTKRSARDAIKEEAERCGMPYMIQRWLGGTLTNFRTVKQSVARLKELELAETD 123
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L +L + + N AI EA K+ IP
Sbjct: 124 GTFSKLVKHEVLRLRRESGKLQASLGGIKDMNRIPDAIFVIDIGHEDIAIKEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
V +VD+N +P+L+ YP+PGNDD A+Q Y + A+L+GK A + + E+
Sbjct: 184 VAVVDTNYDPSLVDYPIPGNDDAIRAVQLYARAAADAVLEGKAAMPNAAAVREEE 238
>gi|334140920|ref|YP_004534126.1| 30S ribosomal protein S2 [Novosphingobium sp. PP1Y]
gi|333938950|emb|CCA92308.1| small subunit ribosomal protein S2 [Novosphingobium sp. PP1Y]
Length = 254
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 104/224 (46%), Gaps = 40/224 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++ + +A H GH+ + RMKPYI+G R G I DL Q+ L+ AL+FV+
Sbjct: 5 VVTMQQLIEAGAHFGHQTHRWNPRMKPYIFGARNGIHIIDLSQTVPLMARALDFVSATVQ 64
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDC-QEFAHTRFWRQGMFTNSEKLFRAVTRLP------ 178
G VLFVG Q I + A+ C Q F + R W GM TN + + +++ R
Sbjct: 65 AGGKVLFVGTKRQAQEPIAQAARACGQHFVNHR-WLGGMLTNWKTISQSIKRFKALEEQL 123
Query: 179 --DLVILTNT---------------------------LTTVLEPNP---AIGEAAKMCIP 206
D LT + V++ N AI EA + IP
Sbjct: 124 AGDTAGLTKKEVLQLTRERDKLELSLGGIRDMGGIPDVMFVIDANKEDLAIKEANTLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
V ++D+N +P I +P+PGNDD A++ YC+ A KG +
Sbjct: 184 VVAVLDTNVSPEGIAFPIPGNDDASRAVRLYCEAIAQAATKGGQ 227
>gi|310828086|ref|YP_003960443.1| 30S ribosomal protein S2 [Eubacterium limosum KIST612]
gi|308739820|gb|ADO37480.1| hypothetical protein ELI_2498 [Eubacterium limosum KIST612]
Length = 259
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 98/226 (43%), Gaps = 39/226 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K + +A VH GH+ + +M PYI+ R G I DL Q+ + + A NFV +A
Sbjct: 4 VTMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVKKIDVACNFVKEVAAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
+LFVG Q IEK A+ F W G TN + + + RL +L +
Sbjct: 64 GESILFVGTKKQAQTSIEKEAKRSGSFCVNHRWLGGTLTNFTTISKRIERLKELKAMEED 123
Query: 187 LTTVLEPNP---------------------------------------AIGEAAKMCIPT 207
T L P AI EA K+ IP
Sbjct: 124 GTFELLPKKEVIKLKREREKLQKFLGGIEDMKEMPGAMIVIDSKKERIAIAEAHKLGIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V IVD+NC+P+ I Y +PGNDD A+ V AI++GK+ +Q
Sbjct: 184 VSIVDTNCDPDEIDYVIPGNDDAIRAVALILGVLADAIIEGKQGEQ 229
>gi|167626818|ref|YP_001677318.1| 30S ribosomal protein S2 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167596819|gb|ABZ86817.1| 30S ribosomal protein S2 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 257
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 106/229 (46%), Gaps = 41/229 (17%)
Query: 59 DYFQVRNLVK--VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDA 116
D Q+R + +K+M A VH GHK + +MK YI+G+ G I +L+++ L +DA
Sbjct: 10 DITQIRKIKMSLMKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDA 69
Query: 117 LNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR 176
+NFV G VLFVG Q +IE A+ C + W GM TN + + +++ R
Sbjct: 70 VNFVGKTVANGGKVLFVGTKRQAQDIIEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKR 129
Query: 177 LPDL---------------VILTNTLT---------------------TVLEPNP---AI 197
L L +L N T V++ N AI
Sbjct: 130 LAQLEKMKEDGTFESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAI 189
Query: 198 GEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAIL 246
EA K+ I V IVD+N NP I Y +PGNDD +I +Y + F A++
Sbjct: 190 QEAQKLGIKVVSIVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVI 238
>gi|402497037|ref|YP_006556297.1| 30S ribosomal protein S2 [Wolbachia endosymbiont of Onchocerca
ochengi]
gi|398650310|emb|CCF78480.1| 30S ribosomal protein S2 [Wolbachia endosymbiont of Onchocerca
ochengi]
Length = 282
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 108/226 (47%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQI--IFDLDQSAELLRDALNFVAHIA 124
V V+D+ + VH GHKI + +M PYIYGV Q I DL ++ LL+ A+ + +A
Sbjct: 7 VTVRDLAGSGVHFGHKISRWNAKMAPYIYGVHQENRIHIIDLRKTLPLLQVAMRALYDVA 66
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------SEKLF 171
++ G +LFVG Q +I A C ++ W GM TN EK+
Sbjct: 67 FQGGRILFVGTKFQALDIIASEAIRCGQYYVNYRWLGGMLTNWGTVSSSIKTLIQCEKIL 126
Query: 172 -----------------------------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
R + +PD++ + +T + + A+ EA K
Sbjct: 127 NDENSVLTKKELGNVEKKRQKLDKALGGIREMGAIPDILFIIDT----NKEHIAVKEAKK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ IP V ++D+N NP+ ITYP+PGNDD+ +++ YC++ IL G
Sbjct: 183 LRIPIVAVLDTNSNPDDITYPIPGNDDSRKSVELYCRLAADCILAG 228
>gi|339500033|ref|YP_004698068.1| 30S ribosomal protein S2 [Spirochaeta caldaria DSM 7334]
gi|338834382|gb|AEJ19560.1| ribosomal protein S2 [Spirochaeta caldaria DSM 7334]
Length = 294
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 109/243 (44%), Gaps = 48/243 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + ++ VH GH++ D RMK YI+ R G I DL ++ + ++DA V
Sbjct: 3 VVTMKSLLESGVHFGHQVKRWDPRMKKYIFAERNGIHIIDLQKTIQAIKDAYEAVRKTVS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
VLFVG Q I+K A+ C F W GM TN
Sbjct: 63 SGKTVLFVGTKKQAQQAIQKEAERCGMFYVNNRWLGGMLTNFATIKKSLLRLKKLEKMEV 122
Query: 167 -------SEKLFRAVTR-----------------LPDLVILTNTLTTVLEPNPAIGEAAK 202
++K A+ + LP ++ + +T + A+ EA +
Sbjct: 123 DGTFDNLTKKEIAALAKERAKLQKNLGGIKEMKELPGILFVIDTRKEAI----AVAEAQR 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG-KKAKQDTLKLLSE 261
M IP V +VD+NCNP I YP+PGNDD AI + Q+ A+++ +A ++ L +
Sbjct: 179 MGIPVVAVVDTNCNPEGIDYPIPGNDDAIRAITLFTQIIANAVIEADNEAGLKIIETLGD 238
Query: 262 KQE 264
++E
Sbjct: 239 EEE 241
>gi|251771485|gb|EES52062.1| ribosomal protein S2 [Leptospirillum ferrodiazotrophum]
Length = 255
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 39/230 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K++ DA VH GH+ + +MK +IYG R G I DL Q+ R A F+ +
Sbjct: 4 VTIKELLDAGVHFGHQAKRWNPKMKRFIYGERNGIYIIDLQQTTRRYRQATAFIKKVVGE 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAV------------ 174
VLF+ Q ++ + A+ C F T+ W GM TN + + ++V
Sbjct: 64 GKSVLFIATKKQAQSIVVEEAERCGMFHVTQRWLGGMLTNHQTIRKSVDRLKKIEAMKEG 123
Query: 175 ---TRLPDLVI---------LTNTLTT------------VLEPNP---AIGEAAKMCIPT 207
RLP I L +TL+ V++P AI EA ++ IP
Sbjct: 124 DQWARLPKKEIAQLEKEESKLRSTLSGIRGMSQLPGAVFVIDPKKEHIAIHEANRLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLK 257
V +VD+NC+P+LI +P+P NDD +I+ A+++G +++ K
Sbjct: 184 VAMVDTNCDPDLIDFPIPANDDAIRSIRLIASGIADAVIEGGISRRSAQK 233
>gi|406909542|gb|EKD49775.1| hypothetical protein ACD_63C00052G0003 [uncultured bacterium]
Length = 277
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 101/221 (45%), Gaps = 39/221 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+++M +A VH GH++ MKPYI+ VR I DL Q+ + L++A ++V + ++G
Sbjct: 57 LEEMLEAGVHFGHQVSRWHPNMKPYIFTVRNNVHIIDLQQTQDRLKEACDYVKGVVSKNG 116
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI------ 182
V+FVG Q +IEK A+ C T W G FTN + + + +L DL
Sbjct: 117 TVVFVGTKRQAQDIIEKAAKRCGMPYVTERWLGGTFTNFSSIKKQINKLKDLEKKREAGE 176
Query: 183 -------------------------------LTNTLTTV--LEPNPAIGEAAKMCIPTVG 209
L N++ V E ++ EA K + +G
Sbjct: 177 LKKYTKKEQVDFDKEIERLERFFGGLKSIKNLPNSIFVVDLREDKNSVAEARKKGVNIIG 236
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
+ D+N NP L+ YP+P NDD AI AI++GKK
Sbjct: 237 LCDTNANPRLVNYPIPSNDDAVKAIGIIVNAVADAIIEGKK 277
>gi|218781005|ref|YP_002432323.1| 30S ribosomal protein S2 [Desulfatibacillum alkenivorans AK-01]
gi|226697636|sp|B8FGE6.1|RS2_DESAA RecName: Full=30S ribosomal protein S2
gi|218762389|gb|ACL04855.1| ribosomal protein S2 [Desulfatibacillum alkenivorans AK-01]
Length = 294
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 107/224 (47%), Gaps = 41/224 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K++ +A VH GH+ + +MKPYI+G R G I DL ++ + R A FV+ +
Sbjct: 4 ISMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIVDLQKTVRMFRTACEFVSDVVAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQE-FAHTRFWRQGMFTNSEKLFRAVTRLPDL--VIL 183
G VLFVG Q + + A + + H R W GM TN + + + + RL L + L
Sbjct: 64 GGSVLFVGTKKQAREAVYEEANRAEAYYVHNR-WLGGMLTNFQTIKKGIDRLNYLNEIKL 122
Query: 184 TNTLTT----------------------------------VLEP-NPAIG--EAAKMCIP 206
T+ +++P N AI EA ++ IP
Sbjct: 123 NETINLFPKKERLKLEKERVKLDANLGGIRTMTKLPSVIFIIDPKNEAIAVREAKRLNIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
TV +VD+NC+P+ I Y +PGNDD AI+ A+++GK+
Sbjct: 183 TVAVVDTNCDPDDIDYVIPGNDDAIRAIRLLTSRIAEAVVQGKQ 226
>gi|385799852|ref|YP_005836256.1| 30S ribosomal protein S2 [Halanaerobium praevalens DSM 2228]
gi|309389216|gb|ADO77096.1| SSU ribosomal protein S2P [Halanaerobium praevalens DSM 2228]
Length = 244
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 106/234 (45%), Gaps = 47/234 (20%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + ++ VH GH+ + +MK YI+ R G I DL Q+ +L+ A NFV A
Sbjct: 2 SVVNMKQLLESGVHFGHQTKRWNPKMKQYIFTERNGIYIIDLQQTVKLIDKAYNFVKDQA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL------- 177
VLFVG Q ++ A C + W GM TN + + + + RL
Sbjct: 62 AEGKNVLFVGTKRQAQETVKNEAIKCGMPYVNQRWLGGMLTNYKTIKKRIDRLEEIEQME 121
Query: 178 ------------------------------------PDLVILTNTLTTVLEPNPAIGEAA 201
PDL+ +T+ + + A+ EA
Sbjct: 122 EEGIFEVLPKKEVIELNKEHDKLERFLGGIRDMNGLPDLIFITDAR----KEDIAVSEAR 177
Query: 202 KMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
K+ IP V I+D+NC+P+LI Y +PGNDD A++ V A+L GK+ KQ+
Sbjct: 178 KLDIPIVSILDTNCDPDLIDYVIPGNDDAIRAVKLITSVISDAVLAGKQGKQEA 231
>gi|289578402|ref|YP_003477029.1| 30S ribosomal protein S2 [Thermoanaerobacter italicus Ab9]
gi|297544678|ref|YP_003676980.1| 30S ribosomal protein S2 [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|289528115|gb|ADD02467.1| ribosomal protein S2 [Thermoanaerobacter italicus Ab9]
gi|296842453|gb|ADH60969.1| ribosomal protein S2 [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
Length = 235
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +M PYI+ R G I DL Q+ E L A FV +
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVEKLEQAYEFVKGLV 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
G +LFVG Q I + A+ C F + W G TN + + + RL +L +
Sbjct: 62 MEGGTILFVGTKKQAQDSIREEAERCGMFYVNQRWLGGTLTNFKTIKGRIQRLKELKKME 121
Query: 185 NTLT------------------------------------TVLEPNP---AIGEAAKMCI 205
T +++P A+ EA + I
Sbjct: 122 EDGTFDVLPKKEVIKLRKEKERLQKFLGGIENMQSLPSALFIVDPKKEAIAVAEARSLEI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P V IVD+NC+P+LI YP+PGNDD A++ A+++G + +Q
Sbjct: 182 PIVAIVDTNCDPDLIDYPIPGNDDAIRAVKLITSKIADAVIEGNQGEQ 229
>gi|428771885|ref|YP_007163673.1| 30S ribosomal protein S2 [Cyanobacterium stanieri PCC 7202]
gi|428686164|gb|AFZ46024.1| SSU ribosomal protein S2P [Cyanobacterium stanieri PCC 7202]
Length = 269
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 103/230 (44%), Gaps = 47/230 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K++ D+ VH GH+ + +M YIY R G I DL Q+A+L+ +A N+V A
Sbjct: 3 VVSLKELLDSGVHFGHQTRRWNPKMSQYIYTARNGVHIIDLVQTAQLMDEAYNYVKKAAE 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKL--------------- 170
VLFVG Q + +I + A C F + W GM TN E +
Sbjct: 63 SGKKVLFVGTKRQAAGIIAQEAARCGAFYINQRWLGGMLTNWETIKARVAHLKELEALEE 122
Query: 171 ----------------------------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
+ + R+PDLVI+ + + + AI E K
Sbjct: 123 SGALDRRPKKEASVLRRELTKLRKYLGGIKDMNRVPDLVIIVD----IRREHNAIKECQK 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
+ +P V ++D+NCNP L+ P+P NDD +I+ AI +G+ K
Sbjct: 179 LNLPVVSMLDTNCNPELVDLPIPANDDAIRSIKLIIGKLADAIYEGRYGK 228
>gi|403252504|ref|ZP_10918813.1| 30S ribosomal protein S2 [Thermotoga sp. EMP]
gi|402811994|gb|EJX26474.1| 30S ribosomal protein S2 [Thermotoga sp. EMP]
Length = 262
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 47/229 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M PYIY R+G I DL ++ +LL +A FV A
Sbjct: 3 VVTMKQLLEAGVHFGHRTRRWNPKMAPYIYTERKGIYIIDLQKTQQLLEEAYYFVREKAS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+LFVG Q +I+ A+ C F W G+ TN
Sbjct: 63 EGATILFVGTKKQAQGVIKAEAERCGAFYVNNRWLGGLLTNFKTIRSRIDKLIELEEMEQ 122
Query: 167 ------------------SEKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL + + RLPD++ + + + A+ EA K
Sbjct: 123 SGKLEELPKKEQSRIRRVLEKLRKNLGGLKEMRRLPDIIYIVDPRKEKI----AVAEANK 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+ IP V IVD+NC+P+ I Y +PGNDD +I+ V A L+G++
Sbjct: 179 LGIPIVAIVDTNCDPDPIDYVIPGNDDAIRSIKLITSVIANAYLEGREG 227
>gi|37524673|ref|NP_928017.1| 30S ribosomal protein S2 [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|61215677|sp|Q7N8P7.1|RS2_PHOLL RecName: Full=30S ribosomal protein S2
gi|36784098|emb|CAE12967.1| 30S ribosomal subunit protein S2 [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 241
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + DAL + IA R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELNKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ AQ+C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVKEAAQNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALIRSRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+VD+N +P+ + + +PGNDD A++ Y TA+ +G+
Sbjct: 184 FAVVDTNSDPDGVDFIIPGNDDAIRAVKLYLGAVATAVREGR 225
>gi|296536129|ref|ZP_06898258.1| 30S ribosomal protein S2 [Roseomonas cervicalis ATCC 49957]
gi|296263541|gb|EFH10037.1| 30S ribosomal protein S2 [Roseomonas cervicalis ATCC 49957]
Length = 274
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 100/228 (43%), Gaps = 46/228 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ + +A VH GH + RM PYI+GVR I DL Q+ ++ AL + +
Sbjct: 6 VSLRQLLEAGVHFGHHTRRWNPRMAPYIFGVRNQVHILDLQQTVPMMDRALRAIRDVVAG 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
G VLFVG + + + A C ++ W GM TN
Sbjct: 66 GGRVLFVGTKKSAAEYVAEAATRCGQYYVNHRWLGGMLTNWKTITGSIKRLKQMDEQLGG 125
Query: 167 ----------------SEKLFRAV------TRLPDLVILTNTLTTVLEPNPAIGEAAKMC 204
EKL RA+ LPD++ + + V++ AI EA K+
Sbjct: 126 NTQGLTKKEVLMLTREREKLDRALGGIREMGGLPDIIFVID----VVKEKLAIEEANKLG 181
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
IP V +VDSN +P + +P+PGNDD AI YC + A+ G A+
Sbjct: 182 IPVVAVVDSNADPEGVAFPIPGNDDAIRAINLYCDMVAAAVFDGISAE 229
>gi|206603567|gb|EDZ40047.1| Ribosomal protein S2 [Leptospirillum sp. Group II '5-way CG']
Length = 274
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 39/221 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K+M +A VH GH+ + +MK +IYG R G I DL Q+ R A F +
Sbjct: 19 VTLKEMLEAGVHFGHQTKRWNPKMKRFIYGERNGIYILDLQQTVRRFRVAREFAKSVVRN 78
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
G +LFVG Q +I++ AQ C + T W GM TN + + ++V RL
Sbjct: 79 RGSILFVGTKRQAQPIIQQEAQRCGMYFVTERWLGGMLTNLQTVRKSVERLNKIEEMMES 138
Query: 178 ------------------PDLVILTNTLTT---------VLEPNP---AIGEAAKMCIPT 207
L + N + V++P A+ EA ++ IP
Sbjct: 139 GQISRLPKKEVAQLEKEHEKLASILNGIRGLSHLPAAIFVIDPKKEHIAVHEANRLGIPV 198
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ +VD+NC+P++I +P+P NDD +I+ A+L G
Sbjct: 199 IAMVDTNCDPDMIQFPIPSNDDAIRSIRLITAGIADAVLDG 239
>gi|297617171|ref|YP_003702330.1| 30S ribosomal protein S2 [Syntrophothermus lipocalidus DSM 12680]
gi|297145008|gb|ADI01765.1| ribosomal protein S2 [Syntrophothermus lipocalidus DSM 12680]
Length = 232
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 41/229 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + +A VH GH+ + +M PYIY R G I DL Q+ + +A +FV +
Sbjct: 2 SIVTMKQLLEAGVHFGHQTRRWNPKMAPYIYMERNGIYIIDLQQTVKKFEEAFDFVRSMV 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------ 166
+LFVG Q I+ A C F + W GM TN
Sbjct: 62 SEGKTILFVGTKKQAQETIKDEATRCGMFYVNQRWLGGMLTNFKTIRKRVYRLKELEKME 121
Query: 167 -------------------SEKLFRAVTRLPDLVILTNTLTTVLEPNP---AIGEAAKMC 204
EKL R + + D+ L + V++P A+ EA K+
Sbjct: 122 EEGAFELLPKKEVARLRAEREKLERFLRGIKDMDELPGAV-YVVDPRKEKIAVAEARKLK 180
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
IP +GIVD+NC+P+ I Y +PGNDD A++ A+L+GK+ +Q
Sbjct: 181 IPVIGIVDTNCDPDEIDYIIPGNDDAIRAVKLITSKIADAVLEGKQGEQ 229
>gi|190571619|ref|YP_001975977.1| 30S ribosomal protein S2 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|238058204|sp|B3CNG9.1|RS2_WOLPP RecName: Full=30S ribosomal protein S2
gi|190357891|emb|CAQ55351.1| ribosomal protein S2 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 271
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 111/226 (49%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGV-RQGQI-IFDLDQSAELLRDALNFVAHIA 124
V ++D+ ++ VH GHK+ + +M PYIYGV +Q +I I DL ++ LL A+ + +A
Sbjct: 7 VTIRDLAESGVHFGHKVSRWNAKMAPYIYGVHQQNRIHIIDLRKTLPLLEAAMKALYDVA 66
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS-------------EKLF 171
+DG +LFVG Q ++ A C ++ W GM TN EK+
Sbjct: 67 SQDGRILFVGTKFQALDIVASEAVRCGQYYVNDRWLGGMLTNWNTVSSSIKTLIQYEKIL 126
Query: 172 -----------------------------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
R + +PD++ + +T + + A+ EA K
Sbjct: 127 NDEDSILTKKELGNIEKKRKKLDKELGGIREMGAVPDILFIIDT----NKEHIAVKEAKK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ IP VG++D+N +P+ I YP+ GNDD+ +I+ YC++ +IL G
Sbjct: 183 LGIPVVGVLDTNSDPDDIAYPISGNDDSRKSIELYCKLAADSILAG 228
>gi|375111084|ref|ZP_09757295.1| 30S ribosomal protein S2 [Alishewanella jeotgali KCTC 22429]
gi|397169745|ref|ZP_10493175.1| 30S ribosomal protein S2 [Alishewanella aestuarii B11]
gi|374568626|gb|EHR39798.1| 30S ribosomal protein S2 [Alishewanella jeotgali KCTC 22429]
gi|396088640|gb|EJI86220.1| 30S ribosomal protein S2 [Alishewanella aestuarii B11]
Length = 242
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+Q+ ++ DAL F+ ++ +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEQTVPMMNDALAFIQQVSAK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S I++ A +F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAIKEAAVKVDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQD 123
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L +L + E AI EA + IP
Sbjct: 124 GTFDKLTKKEALDRTREMDKLEKSLGGIKEMGGLPDVLFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
V IVD+N +P + Y +PGNDD AIQ Y AI +G+
Sbjct: 184 VAIVDTNSDPKGVDYVIPGNDDAIRAIQLYLGAVGQAIQEGR 225
>gi|410479865|ref|YP_006767502.1| 30S ribosomal protein S2 [Leptospirillum ferriphilum ML-04]
gi|406775117|gb|AFS54542.1| ribosomal protein S2 [Leptospirillum ferriphilum ML-04]
Length = 259
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 39/221 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K+M +A VH GH+ + +MK +IYG R G I DL Q+ R A F +
Sbjct: 4 VTLKEMLEAGVHFGHQTKRWNPKMKRFIYGERNGIYILDLQQTVRRFRVAREFAKSVVRN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
G +LFVG Q +I++ AQ C + T W GM TN + + ++V RL
Sbjct: 64 RGSILFVGTKRQAQPIIQQEAQRCGMYFVTERWLGGMLTNLQTVRKSVERLNKIEEMMES 123
Query: 178 ------------------PDLVILTNTLTT---------VLEPNP---AIGEAAKMCIPT 207
L + N + V++P A+ EA ++ IP
Sbjct: 124 GQISRLPKKEVAQLEKEHEKLASILNGIRGLSHLPAAIFVVDPKKEHIAVHEANRLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ +VD+NC+P++I +P+P NDD +I+ A+L G
Sbjct: 184 IAMVDTNCDPDMIQFPIPSNDDAIRSIRLITAGIADAVLDG 224
>gi|213019021|ref|ZP_03334828.1| ribosomal protein S2 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212995130|gb|EEB55771.1| ribosomal protein S2 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 281
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 111/226 (49%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGV-RQGQI-IFDLDQSAELLRDALNFVAHIA 124
V ++D+ ++ VH GHK+ + +M PYIYGV +Q +I I DL ++ LL A+ + +A
Sbjct: 17 VTIRDLAESGVHFGHKVSRWNAKMAPYIYGVHQQNRIHIIDLRKTLPLLEAAMKALYDVA 76
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS-------------EKLF 171
+DG +LFVG Q ++ A C ++ W GM TN EK+
Sbjct: 77 SQDGRILFVGTKFQALDIVASEAVRCGQYYVNDRWLGGMLTNWNTVSSSIKTLIQYEKIL 136
Query: 172 -----------------------------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
R + +PD++ + +T + + A+ EA K
Sbjct: 137 NDEDSILTKKELGNIEKKRKKLDKELGGIREMGAVPDILFIIDT----NKEHIAVKEAKK 192
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ IP VG++D+N +P+ I YP+ GNDD+ +I+ YC++ +IL G
Sbjct: 193 LGIPVVGVLDTNSDPDDIAYPISGNDDSRKSIELYCKLAADSILAG 238
>gi|157962704|ref|YP_001502738.1| 30S ribosomal protein S2 [Shewanella pealeana ATCC 700345]
gi|189044995|sp|A8H6L6.1|RS2_SHEPA RecName: Full=30S ribosomal protein S2
gi|157847704|gb|ABV88203.1| ribosomal protein S2 [Shewanella pealeana ATCC 700345]
Length = 242
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 45/233 (19%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R G I +L+ + + +AL F++++A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG S I++ A C ++ W GM TN + + +++ RL DL
Sbjct: 64 KGKVLFVGTKRAASEAIKEAAVSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKDLESQSVD 123
Query: 181 -----------VILTNTLTTVLEP----------------------NPAIGEAAKMCIPT 207
++ T L + + + AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELDKLEKSLGGIKNMAGLPDVIFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK------KAKQD 254
V +VD+N +P+ I Y +PGNDD +I+ Y Q A G+ +A+QD
Sbjct: 184 VAVVDTNSSPDGINYIIPGNDDAMRSIRLYTQSVAAAAKAGRGQDLAVQAEQD 236
>gi|209573718|sp|B0U101.2|RS2_FRAP2 RecName: Full=30S ribosomal protein S2
Length = 239
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 101/217 (46%), Gaps = 39/217 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K+M A VH GHK + +MK YI+G+ G I +L+++ L +DA+NFV G
Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-------- 180
VLFVG Q +IE A+ C + W GM TN + + +++ RL L
Sbjct: 64 KVLFVGTKRQAQDIIEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMKEDGT 123
Query: 181 -------VILTNTLT---------------------TVLEPNP---AIGEAAKMCIPTVG 209
+L N T V++ N AI EA K+ I V
Sbjct: 124 FESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVS 183
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAIL 246
IVD+N NP I Y +PGNDD +I +Y + F A++
Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVI 220
>gi|374298552|ref|YP_005050191.1| 30S ribosomal protein S2 [Desulfovibrio africanus str. Walvis Bay]
gi|332551488|gb|EGJ48532.1| ribosomal protein S2 [Desulfovibrio africanus str. Walvis Bay]
Length = 263
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K M + VH GH+ + +M+P+I+G R G I DL Q+ L R A +F+A
Sbjct: 4 VSMKQMLETGVHFGHQTRRWNPKMRPFIFGARNGIHIIDLQQTVGLFRTAHDFIADSVAA 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLP-------- 178
G +FVG Q I+ A+ ++ T W G TN + + +++ RL
Sbjct: 64 GGSCIFVGTKRQAQEAIKTEAERAGQYYITNRWLGGTLTNFQTISKSIERLKKLEAMFED 123
Query: 179 -----------------------DLVILTN-----TLTTVLEPNP---AIGEAAKMCIPT 207
DL + N ++ V++PN A+ E K+ IP
Sbjct: 124 GTINRYSKKEISRMSREMGKLSGDLGGIKNLEGLPSVAFVIDPNREEIAVKECRKLGIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
V +VD+NC+P+LI Y +PGNDD AI+ + A ++GK
Sbjct: 184 VAVVDTNCDPDLIDYVIPGNDDAIRAIKLFVTAMADACVEGK 225
>gi|226952616|ref|ZP_03823080.1| 30S ribosomal protein S2 [Acinetobacter sp. ATCC 27244]
gi|226836696|gb|EEH69079.1| 30S ribosomal protein S2 [Acinetobacter sp. ATCC 27244]
Length = 267
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 110/245 (44%), Gaps = 48/245 (19%)
Query: 52 PNPLRYHDYFQVRNL----VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLD 107
PNP F+V+ + V ++D+ A H GH+ + +M+ YI+G R I +L+
Sbjct: 9 PNP-----NFKVKKMADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLE 63
Query: 108 QSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS 167
+ L DALNFV ++A + VLFVG S +I + AQ + W GM TN
Sbjct: 64 HTVPALNDALNFVNNLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNW 123
Query: 168 EKLFRAVTRLPDLVILTN-------TLTTVLE---------------------PNP---- 195
+ L +++ RL DL + T LE P+
Sbjct: 124 KTLRQSINRLKDLQTQSQDGTFAKLTKREALERTREMEKLERALGGVKNMGGLPDALFVI 183
Query: 196 -------AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
AI EA + IP +GIVD+N NP+ + Y +PGNDD A+ Y AIL G
Sbjct: 184 DVDHEAIAIKEAKNLGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAG 243
Query: 249 KKAKQ 253
K+ Q
Sbjct: 244 KEYAQ 248
>gi|414343411|ref|YP_006984932.1| 30S ribosomal protein S2 [Gluconobacter oxydans H24]
gi|411028746|gb|AFW02001.1| 30S ribosomal protein S2 [Gluconobacter oxydans H24]
gi|453331345|dbj|GAC86924.1| 30S ribosomal protein S2 [Gluconobacter thailandicus NBRC 3255]
Length = 261
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 99/226 (43%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + M PY++GVR I DL Q+ LL AL V G
Sbjct: 8 MRQLLEAGVHFGHHTRRWNPAMAPYLFGVRNQVHIIDLQQTVPLLDRALKLVRETVANGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG + + + AQ C ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRAAAEHVAEAAQRCGQYYVNHRWLGGMLTNWKTITGSIKRLRQIDEMLSGDT 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T L A+ EA K+ IP
Sbjct: 128 AGLTKKEVLDITRDREKLERSLGGIKEMGGLPDLIFVIDTNKEKL----AVEEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
+GI+DSN NP IT+P+PGNDD AI YC + A+L G A+
Sbjct: 184 VIGILDSNSNPAGITFPIPGNDDAIRAITLYCDLISGAVLDGISAE 229
>gi|288958467|ref|YP_003448808.1| 30S ribosomal protein S2 [Azospirillum sp. B510]
gi|288910775|dbj|BAI72264.1| small subunit ribosomal protein S2 [Azospirillum sp. B510]
Length = 259
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + +M YI+GVR G I DL+Q+ +L AL V + G
Sbjct: 8 MRQLLEAGVHFGHHTRRWNPKMNQYIFGVRNGVHIIDLEQTVPMLHRALQAVRDVVAGGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR------------ 176
VLFVG Q I + A C ++ W GM TN + + +++ R
Sbjct: 68 RVLFVGTKRQAQERIAEAAAKCGQYYVNHRWLGGMLTNWKTISQSIKRLREMEERLGGDT 127
Query: 177 ------------------------------LPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
LPD++ + +T + A+ EA K+ IP
Sbjct: 128 SGLTKREVLELTRERDKLERALGGIKEMGGLPDVIFIIDTNKESI----AVKEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
+ ++DSN +P+ + +P+PGNDD AI+ YC + A+L G +A+
Sbjct: 184 VIAVLDSNSDPDGVAFPIPGNDDALRAIEMYCDLTVGAVLDGLQAE 229
>gi|415734090|ref|ZP_11474519.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|315926601|gb|EFV05982.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni DFVF1099]
Length = 260
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 111/241 (46%), Gaps = 48/241 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++D+ + VH GH+ + +MK +I+G R+G + DL ++ R N V A
Sbjct: 1 MRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAEGK 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
+LFVG Q I++ A+ C W GM TN
Sbjct: 61 TILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEEDGS 120
Query: 167 ---------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
EKL R + PD++ + +T+ + A+ EA ++ I
Sbjct: 121 IKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKI----AVQEANRLRI 176
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK-QDTLKLLSEKQE 264
P V +D+NC+P+L+TYP+PGNDD ++Q +CQ AI +GK + QD L++E++E
Sbjct: 177 PVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALREQDGEALVNEEKE 236
Query: 265 V 265
+
Sbjct: 237 I 237
>gi|154249917|ref|YP_001410742.1| 30S ribosomal protein S2 [Fervidobacterium nodosum Rt17-B1]
gi|171769413|sp|A7HMF2.1|RS2_FERNB RecName: Full=30S ribosomal protein S2
gi|154153853|gb|ABS61085.1| ribosomal protein S2 [Fervidobacterium nodosum Rt17-B1]
Length = 259
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 39/225 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +MKPYIYG R+G I DL ++ +L+ +A +FV +A
Sbjct: 3 VVTMKQLLEAGVHFGHRTQRWNPKMKPYIYGARKGIYIIDLQKTVKLIDEAYDFVRDVAS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
+ G +LFVG Q +++ A+ C F W G+ TN + + + RL +L
Sbjct: 63 KGGTILFVGTKKQAQQVVKNEAERCGGFYVNNRWLGGLLTNFQTIQSRIQRLIELEEMEA 122
Query: 181 ------------VILTNTLTT-------------------VLEPNP---AIGEAAKMCIP 206
L TL V++P A+ EA + IP
Sbjct: 123 NGELDKLPKKEQSKLRKTLEKLRKNLGGLKNMRGLPDVIFVVDPRKEKIAVEEANYLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V +VD+NC+P+ I Y +P NDD AI A L+G++
Sbjct: 183 IVAMVDTNCDPDPIDYVIPSNDDAIRAIALIASKIADAYLEGREG 227
>gi|189425764|ref|YP_001952941.1| 30S ribosomal protein S2 [Geobacter lovleyi SZ]
gi|238692130|sp|B3E716.1|RS2_GEOLS RecName: Full=30S ribosomal protein S2
gi|189422023|gb|ACD96421.1| ribosomal protein S2 [Geobacter lovleyi SZ]
Length = 257
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 39/234 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K++ +A VH GH+ + +MKPYI+G R G I DL ++ + A NFV A +
Sbjct: 4 ISMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRYFKSAYNFVKESAEQ 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
VLFVG Q + + A C ++ + W GM TN + +++ RL L +
Sbjct: 64 GNTVLFVGTKKQAQDSVAEEATRCGQYYVNQRWLGGMLTNFSTVKQSIERLKKLDAMFED 123
Query: 187 LTT------------------------------------VLEPNP---AIGEAAKMCIPT 207
T V++P A+ EA K+ IP
Sbjct: 124 GTIEAYTKKEALKMDKEREKLEKVLGGIKNMNKLPGMMFVIDPKNEEIAVQEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSE 261
V IVD+NC+P++I + +PGNDD AI+ A+ +G A+ L+ +E
Sbjct: 184 VAIVDTNCDPDMIDHVIPGNDDAIRAIRLLTAKIADAVQEGADARNVVLQSGAE 237
>gi|195953649|ref|YP_002121939.1| 30S ribosomal protein S2 [Hydrogenobaculum sp. Y04AAS1]
gi|195933261|gb|ACG57961.1| ribosomal protein S2 [Hydrogenobaculum sp. Y04AAS1]
Length = 271
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 47/230 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +KD+ +A VH GH G + +M PY+YGVR I DL ++ L +A NFV+ +
Sbjct: 3 VSMKDLLEAGVHFGHSKGRWNPKMAPYLYGVRNNIHIIDLGKTVLYLEEAYNFVSDAVSK 62
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS------------------- 167
+LFVG Q ++ + AQ C+ F W G+ TN
Sbjct: 63 GAEMLFVGTKKQAKDVVMEEAQRCESFYVNERWVGGLLTNFKTVRKSIAKLRQLERMEKE 122
Query: 168 ---------------------EKLFRAVT---RLPDLVILTNTLTTVLEPNPAIGEAAKM 203
+KL++ + R+PD++ + +T + A+ EA ++
Sbjct: 123 GVFEVLPKKEVVTMKREMQRLQKLYKGIIDMDRIPDIIWVVDT----NREHIAVTEARRL 178
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+ V I DSNC+P+ I Y +PGNDD +I+ A++ GK+ ++
Sbjct: 179 GVKVVAIADSNCDPDEIDYLIPGNDDAIKSIKLLTSRIADAVIDGKQRRE 228
>gi|359440425|ref|ZP_09230345.1| small subunit ribosomal protein S2 [Pseudoalteromonas sp. BSi20429]
gi|392533955|ref|ZP_10281092.1| 30S ribosomal protein S2 [Pseudoalteromonas arctica A 37-1-2]
gi|358037738|dbj|GAA66594.1| small subunit ribosomal protein S2 [Pseudoalteromonas sp. BSi20429]
Length = 242
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+Q+ + DAL F++ A
Sbjct: 4 VSMRDMLQAGVHFGHQARYWNPKMKPFIFGTRNRVHIINLEQTVPMFNDALKFLSSAAAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG S ++ A + +F W GM TN + + +++ RL DL
Sbjct: 64 KGKVLFVGTKRAASDAVKSAALESDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQD 123
Query: 181 -----VILTNTLTTVLE-----------------PNP-----------AIGEAAKMCIPT 207
+ TLT E P+ AI EA + IP
Sbjct: 124 GTFEKLTKKETLTLNREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAIREANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
V IVD+N NP+ + Y VPGNDD A+ Y AI +G++
Sbjct: 184 VAIVDTNSNPDGVDYIVPGNDDAIRAVSLYTSAVAAAITEGRE 226
>gi|227114687|ref|ZP_03828343.1| 30S ribosomal protein S2 [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|227326537|ref|ZP_03830561.1| 30S ribosomal protein S2 [Pectobacterium carotovorum subsp.
carotovorum WPP14]
gi|253687337|ref|YP_003016527.1| 30S ribosomal protein S2 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|261822599|ref|YP_003260705.1| 30S ribosomal protein S2 [Pectobacterium wasabiae WPP163]
gi|403057413|ref|YP_006645630.1| 30S ribosomal protein S2 [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|259495220|sp|C6DAI3.1|RS2_PECCP RecName: Full=30S ribosomal protein S2
gi|251753915|gb|ACT11991.1| ribosomal protein S2 [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|261606612|gb|ACX89098.1| ribosomal protein S2 [Pectobacterium wasabiae WPP163]
gi|385872913|gb|AFI91433.1| 30S ribosomal protein S2 [Pectobacterium sp. SCC3193]
gi|402804739|gb|AFR02377.1| 30S ribosomal protein S2 [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 241
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + DAL ++ IA R
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELSKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S ++ A +C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVKDAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+VD+N +P+ + Y +PGNDD A+ Y TA+ +G+
Sbjct: 184 FAVVDTNSDPDGVDYIIPGNDDAIRAVSLYLSAVATAVREGR 225
>gi|421082950|ref|ZP_15543829.1| 30S ribosomal subunit protein S2 [Pectobacterium wasabiae CFBP
3304]
gi|401702176|gb|EJS92420.1| 30S ribosomal subunit protein S2 [Pectobacterium wasabiae CFBP
3304]
Length = 241
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + DAL ++ IA R
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELSKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S ++ +A C +F W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASEAVKDSANTCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+VD+N +P+ + + +PGNDD A+ Y TA+ +G+
Sbjct: 184 FAVVDTNSDPDGVDFIIPGNDDAIRAVNLYLSAVATAVREGR 225
>gi|260575091|ref|ZP_05843092.1| ribosomal protein S2 [Rhodobacter sp. SW2]
gi|259022713|gb|EEW26008.1| ribosomal protein S2 [Rhodobacter sp. SW2]
Length = 252
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 99/226 (43%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M YIYG R G I DL Q+ LL AL V + G
Sbjct: 8 MRQLLEAGVHYGHQTARWNPKMGEYIYGDRNGIHILDLTQTVPLLDQALKVVRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
+LFVG Q I + A+ C +F W G TN + + +++ RL
Sbjct: 68 RILFVGTKRQAQKPISEAAERCAQFYMNHRWLGGTLTNWKTVSQSINRLKQVDELMAHGA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + V + + AI EA K+ IP
Sbjct: 128 DGLTKKERLNIEREQTKLQASLGGIREMGGVPDLIFIID----VGKEDLAILEAQKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
+ +VD+NC+P + Y +PGNDD AI YC + A L G A+
Sbjct: 184 VIAVVDTNCSPKGVDYIIPGNDDAARAIALYCDLISRAALDGMTAQ 229
>gi|254875948|ref|ZP_05248658.1| 30S ribosomal protein S2 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254841969|gb|EET20383.1| 30S ribosomal protein S2 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 239
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 101/217 (46%), Gaps = 39/217 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K+M A VH GHK + +MK YI+G+ G I +L+++ L +DA+NFV G
Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-------- 180
VLFVG Q +IE A+ C + W GM TN + + +++ RL L
Sbjct: 64 KVLFVGTKRQAQDIIEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMKEDGT 123
Query: 181 -------VILTNTLT---------------------TVLEPNP---AIGEAAKMCIPTVG 209
+L N T V++ N AI EA K+ I V
Sbjct: 124 FGSLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVS 183
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAIL 246
IVD+N NP I Y +PGNDD +I +Y + F A++
Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVI 220
>gi|304384857|ref|ZP_07367203.1| 30S ribosomal protein S2 [Pediococcus acidilactici DSM 20284]
gi|418069071|ref|ZP_12706351.1| SSU ribosomal protein S2P [Pediococcus acidilactici MA18/5M]
gi|1350975|sp|P49668.1|RS2_PEDAC RecName: Full=30S ribosomal protein S2
gi|897795|emb|CAA50276.1| 30S ribosomal protein [Pediococcus acidilactici]
gi|304329051|gb|EFL96271.1| 30S ribosomal protein S2 [Pediococcus acidilactici DSM 20284]
gi|357537804|gb|EHJ21827.1| SSU ribosomal protein S2P [Pediococcus acidilactici MA18/5M]
Length = 261
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 39/229 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +MKP+I+ R G I DL ++ +L+ +A NFV +A
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKPFIFTERNGIYIIDLQKTVKLIDNAYNFVKDVA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
DG+VLFVG Q IE+ A+ +F W G TN + + + RL DL
Sbjct: 62 ANDGVVLFVGTKKQAQTAIEEEAKRAGQFYVNHRWLGGTLTNWNTIQKRIKRLKDLKKME 121
Query: 181 ------------VILTNTLTTVLEP------------------NP-----AIGEAAKMCI 205
V L N LE +P AI EA K+ I
Sbjct: 122 EDGTFDRLPKKEVALLNKQKDKLEKFLGGIEDMPHIPDVLFVVDPRKEQIAIKEAQKLNI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
P V +VD+N +P+ + +P NDD A++ A+++G++ + D
Sbjct: 182 PVVAMVDTNTDPDQVDVIIPSNDDAIRAVRLITSKMADAVVEGRQGEDD 230
>gi|15643525|ref|NP_228571.1| 30S ribosomal protein S2 [Thermotoga maritima MSB8]
gi|418045067|ref|ZP_12683163.1| ribosomal protein S2 [Thermotoga maritima MSB8]
gi|7388195|sp|Q9WZM1.1|RS2_THEMA RecName: Full=30S ribosomal protein S2
gi|4981290|gb|AAD35844.1|AE001746_5 ribosomal protein S2 [Thermotoga maritima MSB8]
gi|351678149|gb|EHA61296.1| ribosomal protein S2 [Thermotoga maritima MSB8]
Length = 262
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 47/229 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M PYIY R+G I DL ++ +LL +A FV A
Sbjct: 3 VVTMKQLLEAGVHFGHRTRRWNPKMAPYIYTERKGIYIIDLQKTQQLLEEAYYFVREKAS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS------------------ 167
+LFVG Q +I+ A+ C F W G+ TN
Sbjct: 63 EGATILFVGTKKQAQGVIKAEAERCGAFYVNNRWLGGLLTNFKTIRSRIDKLIELEEMEQ 122
Query: 168 -------------------EKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL + + RLPD++ + + + A+ EA K
Sbjct: 123 SGKLEELPKKEQSRIRRVLEKLRKNLGGLKEMRRLPDIIYIVDPRKEKI----AVAEANK 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+ IP V IVD+NC+P+ I Y +PGNDD +I+ V A L+G++
Sbjct: 179 LGIPIVAIVDTNCDPDPIDYVIPGNDDAIRSIKLITSVIADAYLEGREG 227
>gi|410463035|ref|ZP_11316577.1| ribosomal protein S2 [Desulfovibrio magneticus str. Maddingley
MBC34]
gi|409983857|gb|EKO40204.1| ribosomal protein S2 [Desulfovibrio magneticus str. Maddingley
MBC34]
Length = 258
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 39/227 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K + + VH GH+ + +M+P+I+G R G I DL Q+ +L + A +F++++
Sbjct: 4 VTMKQLLETGVHFGHQTRRWNPKMRPFIFGARNGIHIIDLQQTVKLYQKAHDFISNVVAG 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G V+FVG Q ++K A+ +F+ T W GM TN + + +++ R+ +L
Sbjct: 64 GGRVIFVGTKRQAQESVKKEAERVGQFSVTNRWMGGMLTNFQTIKKSIDRMKNLERMFED 123
Query: 181 -----------VILTNTLTT-------------------VLEPNP---AIGEAAKMCIPT 207
V++ + +++P A+ E K+ IP
Sbjct: 124 GSIKRFPKKEIVMMGREVAKLNDNLGGIKHMDRLPQAAFIIDPKREEIAVQECRKLGIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
V +VD+NC+P++I Y +PGNDD AI+ + A ++G +D
Sbjct: 184 VAVVDTNCDPDVIDYVIPGNDDAIRAIKLFAASIAEACMEGAAQTKD 230
>gi|282882124|ref|ZP_06290765.1| ribosomal protein S2 [Peptoniphilus lacrimalis 315-B]
gi|281298154|gb|EFA90609.1| ribosomal protein S2 [Peptoniphilus lacrimalis 315-B]
Length = 274
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 115/243 (47%), Gaps = 39/243 (16%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +M +I+ R G I DL ++ + + +A +F I+
Sbjct: 2 SVISMKSLLEAGVHFGHQTRRWNPKMSKFIFTERNGIYIIDLQKTVKKIEEAYDFAREIS 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
G +LFVG Q IEK A+ C+ + W G+ TN + + + + RL L+ +
Sbjct: 62 ANGGKILFVGTKKQAQDAIEKEAKKCEMPFINQRWLGGLLTNYKTIRKRIDRLFKLIEME 121
Query: 185 NTLT------------------------------------TVLEPNP---AIGEAAKMCI 205
+ T +++P A+ EA + I
Sbjct: 122 DDGTFDVLPKKEVIQLIHERERLEKFLGGIKDMDKMPDALYIVDPKKEKIAVKEAHILGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEV 265
P +GIVD+NC+P+ + +P+PGNDD A++ + A+L+GK+ Q+ ++ E +
Sbjct: 182 PVIGIVDTNCDPDELDFPIPGNDDAIRAVKLITETIANAVLEGKQGTQNVVEDDEENMDT 241
Query: 266 QHN 268
+ N
Sbjct: 242 EEN 244
>gi|452944457|ref|YP_007500622.1| ribosomal protein S2 [Hydrogenobaculum sp. HO]
gi|452882875|gb|AGG15579.1| ribosomal protein S2 [Hydrogenobaculum sp. HO]
Length = 271
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 47/230 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +KD+ +A VH GH G + +M PY+YGVR I DL ++ L +A NFV+ +
Sbjct: 3 VSMKDLLEAGVHFGHSKGRWNPKMAPYLYGVRNNIHIIDLGKTVLYLEEAYNFVSDAVSK 62
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS------------------- 167
VLFVG Q +I + A C+ F W G+ TN
Sbjct: 63 GAEVLFVGTKKQAKDVIMEEALRCESFYVNERWVGGLLTNFKTVRKSIAKLRQLERMEKE 122
Query: 168 ---------------------EKLFRAVT---RLPDLVILTNTLTTVLEPNPAIGEAAKM 203
+KL++ + R+PD++ + +T + A+ EA ++
Sbjct: 123 GVFEVLPKKEVVTMKREMQRLQKLYKGIIDMDRIPDIIWVVDT----NREHIAVTEARRL 178
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+ V I DSNC+P+ I Y +PGNDD +I+ A+L GK+ ++
Sbjct: 179 GVKVVAIADSNCDPDEIDYLIPGNDDAIKSIKLLTSRIADAVLDGKQRRE 228
>gi|414155227|ref|ZP_11411542.1| 30S ribosomal protein S2 [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411453277|emb|CCO09446.1| 30S ribosomal protein S2 [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 232
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 39/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M PYI+ R G I DL ++ + + +A FV +A
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTVKKVEEAYEFVKQLAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G +LFVG Q +++ A+ C F + W GM TN + + + + RL +L +
Sbjct: 63 EGGSLLFVGTKKQAQEAVKEEAERCGMFYVNQRWLGGMLTNFQTIRQRIDRLHELERMEE 122
Query: 186 TLT------------------------------------TVLEPNP---AIGEAAKMCIP 206
T V++P A+ EA K+ IP
Sbjct: 123 DGTFDVLPKKEVARLLHEKEKLDKFLGGIKNMRRLPGALFVIDPRKERIAVAEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V IVD+NC+P+ + Y +PGNDD A++ A+L+GK+ +Q
Sbjct: 183 IVAIVDTNCDPDEVDYVIPGNDDAIRAVKLLTAKIADAVLEGKQGEQ 229
>gi|383785385|ref|YP_005469955.1| 30S ribosomal protein S2 [Leptospirillum ferrooxidans C2-3]
gi|383084298|dbj|BAM07825.1| ribosomal protein S2 [Leptospirillum ferrooxidans C2-3]
Length = 251
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 39/224 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K+M ++ VH GH+ + +MK +IYG R G I DL Q+A+ + A +F+ ++
Sbjct: 6 IKEMLESGVHFGHQTKRWNPKMKRFIYGERNGIYILDLQQTAKRFKAAKDFIRNLVKDKK 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAV-------------- 174
VLFVG Q +I++ A C + T W GM TN + + ++V
Sbjct: 66 SVLFVGTKRQAQPIIQQEADRCGMYYVTERWLGGMLTNLQTVRKSVDRLNKIESMIEAGE 125
Query: 175 -TRLPD-------------LVILTNTLTT--------VLEPNP---AIGEAAKMCIPTVG 209
RLP L IL+ V++P AI EA ++ IP +
Sbjct: 126 IARLPKKEVAILDKEHRKLLAILSGIRGMNRLPGAIFVVDPKKEHIAIHEANRLGIPVIA 185
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+VDSNC+P+LI +PVP NDD +I+ A+L G + Q
Sbjct: 186 MVDSNCDPDLIQFPVPANDDAIRSIRLMTAGIADAVLSGALSGQ 229
>gi|296284724|ref|ZP_06862722.1| 30S ribosomal protein S2 [Citromicrobium bathyomarinum JL354]
Length = 247
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 105/231 (45%), Gaps = 54/231 (23%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ + +A H GH+ + RMKPYI+G R G I DL Q+ L+ AL+FVA A
Sbjct: 6 VTMQQLIEAGAHFGHQTHRWNPRMKPYIFGARNGVHIIDLSQTVPLMARALDFVAATAQA 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQ-DCQEFAHTRFWRQGMFTNSEKLFRAVTRL-------- 177
G VLFVG Q + + A+ Q F + R W GM TN + + ++ RL
Sbjct: 66 KGKVLFVGTKRQAQEPVAEAARMSGQHFVNHR-WLGGMLTNWKTISGSIKRLKTLEEQLS 124
Query: 178 ----------------------------------PDLVILTNTLTTVLEPNPAIGEAAKM 203
PD++I+ + L AI EA +
Sbjct: 125 GDTSGLTKKEVLNLTRERDKLELSLGGIRDMGGIPDVMIVIDANKEDL----AIKEANVL 180
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
IP + ++DSN +P I +PVPGNDD A++ YC F G+ A++D
Sbjct: 181 GIPVIAVLDSNTDPTGIAFPVPGNDDAARAVRLYCDAF------GEAARRD 225
>gi|269101095|ref|YP_003289243.1| 30S ribosomal protein S2 [Ectocarpus siliculosus]
gi|266631603|emb|CAV31274.1| Chloroplast 30S ribosomal protein S2 [Ectocarpus siliculosus]
gi|270118733|emb|CAT18813.1| Chloroplast 30S ribosomal protein S2 [Ectocarpus siliculosus]
Length = 231
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 107/234 (45%), Gaps = 50/234 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+++ + DA VH GHK + +M PYIY R G I DL Q+ E L+ A +F + +
Sbjct: 4 IELAQLLDAGVHFGHKAHRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKRASAK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS------------------- 167
LFVG Q + LI AQ C F W GM TN
Sbjct: 64 KQTFLFVGTKKQAASLIALEAQKCGAFYINHRWLGGMLTNWVTIKSRIDRLNALEEQEKI 123
Query: 168 ------------------EKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKM 203
EKL + + ++PD++++ + ++ AI EA +
Sbjct: 124 NSFSNLPKKEAANLKKELEKLQKYFNGVKGMKKVPDILVIIDQKREII----AIKEALSL 179
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLK 257
IP + I+D+NC+P+L T P+PGNDD+ +I+Y Q +I G +Q++LK
Sbjct: 180 DIPIISILDTNCDPDLATIPIPGNDDSIRSIKYIIQNIADSICLG---QQNSLK 230
>gi|317121840|ref|YP_004101843.1| 30S ribosomal protein S2P [Thermaerobacter marianensis DSM 12885]
gi|315591820|gb|ADU51116.1| SSU ribosomal protein S2P [Thermaerobacter marianensis DSM 12885]
Length = 233
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 100/227 (44%), Gaps = 39/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M+PYI+ R G I DL ++ LL +A NFV +
Sbjct: 3 VVAMKQLLEAGVHFGHQTRRWNPKMRPYIFMERNGIYIIDLQKTVRLLDEAYNFVRELVA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
+ G VLFVG Q I + A C EF W G TN + + RL +L +
Sbjct: 63 QGGRVLFVGTKKQAREAIAEEATRCGEFYINERWLGGTLTNFSTIRTRIDRLAELEQMEA 122
Query: 186 T------------------------------------LTTVLEPNP---AIGEAAKMCIP 206
V++P A+ EA K+ IP
Sbjct: 123 EGHFERLPKKEVARLVREKEKLEKYLGGIKGMKDLPDAVYVVDPRKEKIAVTEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V IVD+NC+P I Y +PGNDD A++ A+L+GK+ Q
Sbjct: 183 VVAIVDTNCDPEEIDYVIPGNDDAIRAVRLITGKIADAVLEGKQGVQ 229
>gi|405382496|ref|ZP_11036279.1| ribosomal protein S2, partial [Rhizobium sp. CF142]
gi|397321089|gb|EJJ25514.1| ribosomal protein S2, partial [Rhizobium sp. CF142]
Length = 229
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 95/209 (45%), Gaps = 46/209 (22%)
Query: 89 RMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQ 148
+MKPYI+G R I DL Q+ +L AL V+ R G VLFVG Q S LI +A+
Sbjct: 4 KMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGGRVLFVGTKRQASELIADSAK 63
Query: 149 DCQEFAHTRFWRQGMFTNSEKLFRAVTRL------------------------------- 177
++ W GM TN + + ++ RL
Sbjct: 64 RSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLDEILSSEQSGYSKKERLNLERERAKLDR 123
Query: 178 -----------PDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPG 226
PDL+ + +T + AI EA ++ IP V I+DSNC+P+LI YP+PG
Sbjct: 124 TLGGIKDMGGTPDLMFIIDTNKEKI----AIDEAKRLGIPVVAIIDSNCDPDLIDYPIPG 179
Query: 227 NDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
NDD AI YC + A + G +Q++
Sbjct: 180 NDDASRAIALYCDLIARAAIDGIARQQNS 208
>gi|118474889|ref|YP_892581.1| 30S ribosomal protein S2 [Campylobacter fetus subsp. fetus 82-40]
gi|424821273|ref|ZP_18246311.1| 30S ribosomal protein S2 [Campylobacter fetus subsp. venerealis
NCTC 10354]
gi|166225254|sp|A0RQU8.1|RS2_CAMFF RecName: Full=30S ribosomal protein S2
gi|118414115|gb|ABK82535.1| ribosomal protein S2 [Campylobacter fetus subsp. fetus 82-40]
gi|342328052|gb|EGU24536.1| 30S ribosomal protein S2 [Campylobacter fetus subsp. venerealis
NCTC 10354]
Length = 258
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 103/227 (45%), Gaps = 47/227 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G I DL ++ R N V A
Sbjct: 1 MVTMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYIIDLQKTIRYFRYTYNIVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
VLFVG Q + I++ A+ C W GM TN
Sbjct: 61 EGKTVLFVGTKKQAGVAIKEYAEKCGMPYVNHRWLGGMMTNFGTIKQSIRKLEVIEAMEE 120
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + LPD+V + +T+ + A+ EA K
Sbjct: 121 DGSINLLTKKEALMLRRKKEKLLATLGGIRNMKSLPDMVFVIDTVKEKI----AVAEANK 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+ +P V +D+NC+P+++ +P+PGNDD ++Q +CQ AI +GK
Sbjct: 177 LRMPVVAPIDTNCDPDIVDFPIPGNDDAIRSVQLFCQEMAEAINEGK 223
>gi|170727620|ref|YP_001761646.1| 30S ribosomal protein S2 [Shewanella woodyi ATCC 51908]
gi|238688708|sp|B1KNU3.1|RS2_SHEWM RecName: Full=30S ribosomal protein S2
gi|169812967|gb|ACA87551.1| ribosomal protein S2 [Shewanella woodyi ATCC 51908]
Length = 242
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 45/233 (19%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R G I +L+ + + +AL F++++A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG S I+++A C ++ W GM TN + + +++ RL DL
Sbjct: 64 KGKVLFVGTKRAASEAIKESAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKDLESQSVD 123
Query: 181 -----------VILTNTLTTVLEP----------------------NPAIGEAAKMCIPT 207
++ T L + + + AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVIFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK------KAKQD 254
V +VD+N +P+ I Y VPGNDD +I+ Y + A G+ +A+QD
Sbjct: 184 VAVVDTNSSPDGINYIVPGNDDAMRSIRLYTESVAAAAKAGRGQDLAVQAEQD 236
>gi|238763979|ref|ZP_04624935.1| 30S ribosomal protein S2 [Yersinia kristensenii ATCC 33638]
gi|238697796|gb|EEP90557.1| 30S ribosomal protein S2 [Yersinia kristensenii ATCC 33638]
Length = 241
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ L +AL + I+ R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELKKISSR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A +C +F W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A++ Y TA+ +G+
Sbjct: 184 FSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLSAVATAVTEGR 225
>gi|319943826|ref|ZP_08018107.1| 30S ribosomal protein S2 [Lautropia mirabilis ATCC 51599]
gi|319743059|gb|EFV95465.1| 30S ribosomal protein S2 [Lautropia mirabilis ATCC 51599]
Length = 250
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 118/239 (49%), Gaps = 42/239 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + RM PYI+G R I +L+++ ++A ++ +A
Sbjct: 3 VTIRQMLEAGVHFGHQTRFWNPRMAPYIFGHRNKIHIINLEKTLVKYQEATRYLRQLAAN 62
Query: 127 DGIVLFVGQSAQNSLLI-EKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPD------ 179
G +LFVG Q+ +I E+ A+ + R W GM TN + + ++ RL D
Sbjct: 63 GGTILFVGTKRQSREIIAEEAARAGMPYVDER-WLGGMLTNFKTVKGSIKRLKDMEQAVE 121
Query: 180 ------------------LVILTNTLTTVLEPNP---------------AIGEAAKMCIP 206
L LT++L + + N A+ EA K+ +P
Sbjct: 122 DGALDQMTKKEALLFTRELAKLTSSLGGIKDLNGLPDALFIVDVGYHKIAVTEARKLGVP 181
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK-QDTLKLLSEKQE 264
VG+VD+N +P I Y +PGNDD+ A++ Y + AIL+GK A+ Q+T+K +E+ E
Sbjct: 182 IVGVVDTNHSPEGIDYVIPGNDDSGRAVRLYARGVADAILEGKAARLQETVKAATEEDE 240
>gi|153952052|ref|YP_001397722.1| 30S ribosomal protein S2 [Campylobacter jejuni subsp. doylei
269.97]
gi|166225256|sp|A7H2J2.1|RS2_CAMJD RecName: Full=30S ribosomal protein S2
gi|152939498|gb|ABS44239.1| ribosomal protein S2 [Campylobacter jejuni subsp. doylei 269.97]
Length = 263
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 48/244 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G + DL ++ R N V A
Sbjct: 1 MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+LFVG Q +++ A+ C W GM TN
Sbjct: 61 EGKTILFVGTKKQAGGALKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEE 120
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + PD++ + +T+ + A+ EA +
Sbjct: 121 DGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKI----AVQEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK-QDTLKLLSE 261
+ IP V +D+NC+P+L+TYP+PGNDD ++Q +CQ AI +GK + QD L +E
Sbjct: 177 LRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALREQDGEALPNE 236
Query: 262 KQEV 265
++E+
Sbjct: 237 EKEI 240
>gi|86138886|ref|ZP_01057458.1| 30S ribosomal protein S2 [Roseobacter sp. MED193]
gi|85824533|gb|EAQ44736.1| 30S ribosomal protein S2 [Roseobacter sp. MED193]
Length = 251
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM PYIYG R G I DL Q+ +L +L V + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMAPYIYGARNGIHIMDLTQTVPMLDQSLQIVRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
+LFVG Q + I + A+ ++ W G TN + + +++ RL
Sbjct: 68 RILFVGTKRQAAGPIAEAAEKSAQYFMNHRWLGGTLTNWKTVSQSIKRLNEINEKLEGGA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + L AI EA K+ IP
Sbjct: 128 EGLTKKERLGMERDQQKLQASLGGIAEMGGVPDLLFVIDVKKEAL----AIAEAKKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V +VD+NC+P+ + + +PGNDD AI YC + A L G A+
Sbjct: 184 VVAVVDTNCSPDGVDFVIPGNDDASRAISLYCDLVARAALDGMSAQ 229
>gi|152978450|ref|YP_001344079.1| 30S ribosomal protein S2 [Actinobacillus succinogenes 130Z]
gi|171704232|sp|A6VME7.1|RS2_ACTSZ RecName: Full=30S ribosomal protein S2
gi|150840173|gb|ABR74144.1| ribosomal protein S2 [Actinobacillus succinogenes 130Z]
Length = 241
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 112/235 (47%), Gaps = 39/235 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +++M +A VH GH+ + +MKP+I+G R G I +L+++ L +AL + IA
Sbjct: 4 VSMREMINAGVHFGHQTRYWNPKMKPFIFGARNGVHIVNLEKTLPLFNEALAELTRIANN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
+G +LFVG S ++ A DCQ+F W GM TN + + +++ RL DL +
Sbjct: 64 NGKILFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 187 LT----------------TVLE------------PNP-----------AIGEAAKMCIPT 207
T LE P+ AI EA + IP
Sbjct: 124 GTFEKLTKKEALDRSREMAKLELSLGGIKDMAGLPDAIFVIGADYEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
IVD+N +P+ + + +PGNDD AIQ Y A+ +G+KA+Q + SE+
Sbjct: 184 FAIVDTNSSPDNVDFVIPGNDDATRAIQLYLTAAAAAVKEGRKAEQAVEEKFSEE 238
>gi|406982054|gb|EKE03423.1| hypothetical protein ACD_20C00206G0007 [uncultured bacterium]
Length = 281
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 39/222 (17%)
Query: 71 DMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIV 130
++ +A VH GH+ + +MK YIYG R G I DL Q++++L DA V A + +
Sbjct: 8 ELLEAGVHFGHQTRRWNPKMKKYIYGERNGIYIIDLQQTSQMLDDAYALVRDYASKGKNI 67
Query: 131 LFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVT--------------- 175
+FVG Q S ++E+ A+ + R W G TN E + +
Sbjct: 68 VFVGTKKQASEIVEEEAKRASAYYINRRWLGGTLTNFETIRSRINKLREIEEFKESGHFE 127
Query: 176 RLP--DLVILTNTLTTV---------LEPNP-------------AIGEAAKMCIPTVGIV 211
RLP ++ LT LT + + P AI EA K+ IP VGIV
Sbjct: 128 RLPKKEVAALTRQLTKLSKSLGGIKEMRGMPDMLFIVDQKKELIAIQEANKIGIPIVGIV 187
Query: 212 DSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
D+NC+P+ I Y +PGNDD +I+ AI++G + ++
Sbjct: 188 DTNCDPDAIDYVIPGNDDAIRSIKLITGKMADAIIEGHQIRE 229
>gi|343425719|emb|CBQ69253.1| related to MRP4-mitochondrial ribosomal protein, small subunit
[Sporisorium reilianum SRZ2]
Length = 357
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 104/211 (49%), Gaps = 30/211 (14%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSA-ELLRDALNFVAHIAYRDGIV 130
+ A +GH + SL +PYIYG R G IFDL+++ LR A + V +A RDG+V
Sbjct: 108 LVAATAQVGHSLSSLKPANQPYIYGQRHGVAIFDLERATLPALRRAASVVKAVAERDGVV 167
Query: 131 LFVG-QSAQNSLLIEKTAQDCQEFAH--TRFWRQGMFTNSEKLFRAV------------- 174
LFVG ++ Q + ++ T + H W G+ TN+ KL +
Sbjct: 168 LFVGTRAGQQAAVLAATKRLGANGFHVTAERWMPGVITNAPKLLASAILKSMEDLDPSGS 227
Query: 175 ---------TRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVP 225
T PDLVI+ N + E + AI EA + IPT+ I DS+ +P +TYP+P
Sbjct: 228 GNTNRLASQTLQPDLVIVLNPV----ENSSAIREATQANIPTIAITDSDVDPRSVTYPIP 283
Query: 226 GNDDTPSAIQYYCQVFKTAILKGKKAKQDTL 256
NDD+ +++ V A +G +A+ L
Sbjct: 284 ANDDSIRSVELIIGVLSKAGEEGLRARAKKL 314
>gi|304414215|ref|ZP_07395583.1| 30S ribosomal subunit protein S2 [Candidatus Regiella insecticola
LSR1]
gi|304283429|gb|EFL91825.1| 30S ribosomal subunit protein S2 [Candidatus Regiella insecticola
LSR1]
Length = 306
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 39/222 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++ M +A VH GH+ + +M PYI+G R I +L+++ +L +AL + I+
Sbjct: 67 IVSMRKMLEAGVHYGHQTRYWNPKMGPYIFGTRNKVHIINLEKTVPMLNEALAELKKIST 126
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
R G +LFVG S I+KTA+DC+++ W GM TN + + +++ RL +L
Sbjct: 127 RKGKILFVGTKRAASESIKKTAEDCKQYFVNHRWLGGMLTNWKTVRQSIKRLKELESQSQ 186
Query: 181 ------------VILTNTLTT-------------------VLEPNP---AIGEAAKMCIP 206
++ T L+ V++ N AI EA + IP
Sbjct: 187 DGTFEKLTKKEVLMRTRELSNLENSLGGIKDMGGLPDALFVIDANHEHIAIKEANNLGIP 246
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
IVD+N +P I + +PGNDD AI Y + TAI +G
Sbjct: 247 IFSIVDTNSSPTGIDFIIPGNDDAIRAINLYLEAVATAIHEG 288
>gi|83592921|ref|YP_426673.1| 30S ribosomal protein S2 [Rhodospirillum rubrum ATCC 11170]
gi|386349652|ref|YP_006047900.1| 30S ribosomal protein S2 [Rhodospirillum rubrum F11]
gi|123767063|sp|Q2RU09.1|RS2_RHORT RecName: Full=30S ribosomal protein S2
gi|29028250|gb|AAO62351.1| putative ribosomal protein S2 [Rhodospirillum rubrum]
gi|83575835|gb|ABC22386.1| SSU ribosomal protein S2P [Rhodospirillum rubrum ATCC 11170]
gi|346718088|gb|AEO48103.1| 30S ribosomal protein S2 [Rhodospirillum rubrum F11]
Length = 262
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 47/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A H GH + +M PY+YG R I DL Q+ +L A+ V + G
Sbjct: 8 MRQLIEAGCHFGHNTRRWNPKMAPYLYGQRDNVHIIDLQQTVPMLYRAMQAVRDVTAGGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q ++ + A+ C ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQAQDVVAEHARRCGQYYVNHRWLGGMLTNWKTISHSIKRLRDLEERFGGGD 127
Query: 178 --------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCI 205
PD++ + +T+ L A+ EA K+ +
Sbjct: 128 LLGLTKKEQLNLGREKDKLDMALGGIKEMGGLPDMLFIIDTVKESL----AVNEANKLGL 183
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
P V ++DSN +P ITYP+PGNDD AIQ YC++ A + G +A+
Sbjct: 184 PVVAVIDSNSDPRGITYPIPGNDDAIRAIQTYCELISGAAIDGIQAQ 230
>gi|239908429|ref|YP_002955171.1| 30S ribosomal protein S2 [Desulfovibrio magneticus RS-1]
gi|259495051|sp|C4XMY2.1|RS2_DESMR RecName: Full=30S ribosomal protein S2
gi|239798296|dbj|BAH77285.1| 30S ribosomal protein S2 [Desulfovibrio magneticus RS-1]
Length = 258
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 111/227 (48%), Gaps = 39/227 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K + + VH GH+ + +M+P+I+G R G I DL Q+ +L + A +F++++
Sbjct: 4 VTMKQLLETGVHFGHQTRRWNPKMRPFIFGARNGIHIIDLQQTVKLYQKAHDFISNVVAG 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS-------------EKLFR- 172
G V+FVG Q ++K A+ +F+ T W GM TN E++F
Sbjct: 64 GGRVIFVGTKRQAQESVKKEAERVGQFSVTNRWMGGMLTNFQTIKKSIDRMKTLERMFED 123
Query: 173 -AVTRLP--DLVILTNTLTT-------------------VLEPNP---AIGEAAKMCIPT 207
++ R P ++V++ + +++P A+ E K+ IP
Sbjct: 124 GSIKRFPKKEIVMMGREVAKLNDNLGGIKHMDRLPQAAFIIDPKREEIAVQECRKLGIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
V +VD+NC+P++I Y +PGNDD AI+ + A ++G +D
Sbjct: 184 VAVVDTNCDPDVIDYVIPGNDDAIRAIKLFAASIAEACMEGAAQNKD 230
>gi|315638916|ref|ZP_07894088.1| 30S ribosomal protein S2 [Campylobacter upsaliensis JV21]
gi|315481134|gb|EFU71766.1| 30S ribosomal protein S2 [Campylobacter upsaliensis JV21]
Length = 262
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 47/231 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK YI+G R+G + DL ++ R N V A
Sbjct: 1 MVSMRDLLECGVHFGHQTRRWNPKMKKYIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+LFVG Q I++ A+ C W GM TN
Sbjct: 61 EGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEE 120
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + PD++ + +T+ + A+ EA +
Sbjct: 121 DGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKSQPDMIFVIDTVKERI----AVAEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+ IP V +D+NC+P+L+TYP+PGNDD ++Q +CQ AI +GK ++
Sbjct: 177 LKIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALRE 227
>gi|57505421|ref|ZP_00371349.1| ribosomal protein S2 [Campylobacter upsaliensis RM3195]
gi|57016246|gb|EAL53032.1| ribosomal protein S2 [Campylobacter upsaliensis RM3195]
Length = 262
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 47/231 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK YI+G R+G + DL ++ R N V A
Sbjct: 1 MVSMRDLLECGVHFGHQTRRWNPKMKKYIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+LFVG Q I++ A+ C W GM TN
Sbjct: 61 EGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEE 120
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + PD++ + +T+ + A+ EA +
Sbjct: 121 DGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKSQPDMIFVIDTVKERI----AVAEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+ IP V +D+NC+P+L+TYP+PGNDD ++Q +CQ AI +GK ++
Sbjct: 177 LKIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALRE 227
>gi|57234832|ref|YP_181123.1| 30S ribosomal protein S2 [Dehalococcoides ethenogenes 195]
gi|123759724|sp|Q3Z9H6.1|RS2_DEHE1 RecName: Full=30S ribosomal protein S2
gi|57225280|gb|AAW40337.1| ribosomal protein S2 [Dehalococcoides ethenogenes 195]
Length = 245
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 47/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K++ +A H GH+ RMK YI+ R G I DL+++ +L A N++ + G
Sbjct: 6 IKELLEAGAHFGHQTSRWHPRMKKYIFTKRNGIHIIDLEKTVVMLDKACNYINQVVSEGG 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q ++ + A+ C + + W G+ TN
Sbjct: 66 KVLFVGTKKQAQEILAEEAKRCGMYFINQRWTGGILTNFHSIQSRIDYLVRLEDQQARGD 125
Query: 167 --------SEKL-------------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
++KL F+ +TRLPD++ + + + A+ EA +M +
Sbjct: 126 FNRLPKKEAQKLAEEIARLNRTMGGFKEMTRLPDVIFVVDPTKEKI----AMAEAKRMGV 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
P V +VD+NCNP+ + YP+P NDD AI+ C ++++ + A
Sbjct: 182 PLVAMVDTNCNPDEVDYPIPSNDDAMRAIKLICSKMADSVIEAQNA 227
>gi|332799208|ref|YP_004460707.1| 30S ribosomal protein S2 [Tepidanaerobacter acetatoxydans Re1]
gi|438002332|ref|YP_007272075.1| SSU ribosomal protein S2p (SAe) [Tepidanaerobacter acetatoxydans
Re1]
gi|332696943|gb|AEE91400.1| ribosomal protein S2 [Tepidanaerobacter acetatoxydans Re1]
gi|432179126|emb|CCP26099.1| SSU ribosomal protein S2p (SAe) [Tepidanaerobacter acetatoxydans
Re1]
Length = 233
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 39/228 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +MK YI+ R G I DL ++ + + +A FV +I+
Sbjct: 2 SIISMKQLLEAGVHFGHQTRRWNPKMKDYIFTERNGIYIIDLQKTVKKIEEAYEFVKNIS 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
G +LFVG Q I++ AQ C F + W GM TN + + + + RL +L +
Sbjct: 62 AEGGSILFVGTKKQAQESIQEEAQRCGMFYVNQRWLGGMLTNFKTIRKRIDRLHELEKME 121
Query: 185 --------------NTL----------------------TTVLEPNP---AIGEAAKMCI 205
N L +++P AI EA K+ I
Sbjct: 122 EDGLFEILPKKEVLNLLHEKERLEKNLGGIKDMTELPQAVFIVDPRKERIAIQEARKLQI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P + IVD+NC+P+ + Y +PGNDD A++ + A+++G++ +Q
Sbjct: 182 PIIAIVDTNCDPDEVDYIIPGNDDAIRAVKLLTEKIADAVIEGRQGEQ 229
>gi|260913181|ref|ZP_05919663.1| 30S ribosomal protein S2 [Pasteurella dagmatis ATCC 43325]
gi|260632768|gb|EEX50937.1| 30S ribosomal protein S2 [Pasteurella dagmatis ATCC 43325]
Length = 240
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R G I +L+++ + DAL + IA
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGPRNGVHIINLEKTVPMFNDALVELTRIASN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
+G +LFVG + ++ TA DCQ++ W GM TN + + +++ RL DL
Sbjct: 64 NGKILFVGTKRAATEAVKSTALDCQQYYVNHRWLGGMLTNWKTVRQSIRRLKDLETQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L +L + E P+ A+ EA + IP
Sbjct: 124 GTFDKLTKKEALMRSREMEKLELSLGGIKEMGGLPDALFVIGADHEHIAVKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD AIQ Y A+ +G+
Sbjct: 184 FAIVDTNSDPDGVDFVIPGNDDAARAIQLYLSAAAAAVKEGR 225
>gi|408419087|ref|YP_006760501.1| 30S ribosomal protein S2 RpsB [Desulfobacula toluolica Tol2]
gi|405106300|emb|CCK79797.1| RpsB: 30S ribosomal protein S2 [Desulfobacula toluolica Tol2]
Length = 284
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 112/240 (46%), Gaps = 39/240 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++++ +A VH GH+ + +MK YI+G R G I DL Q+ +L + A +F+ +A
Sbjct: 4 ITIRELLEAGVHFGHQTKRWNPKMKKYIFGARNGIYIIDLQQTVKLFKQAHDFIKDVAAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
VLFVG Q S I + A ++F W GM TN + + +TR L + N
Sbjct: 64 GQDVLFVGTKKQASEAIYEEANRAEQFYVQNRWLGGMLTNFQTIKNNITRFHFLNSIEND 123
Query: 187 LTT------------------------------------VLEP-NPAIG--EAAKMCIPT 207
T V++P N AI E ++ IP
Sbjct: 124 GTLENYPKKEQGKMLKEKGKLEFAIGGISHMKRLPGAIFVIDPKNEAIAVKEGKRLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEVQH 267
V +VD+NC+P+ I Y +PGNDD +I+ + A ++G++ ++ + S+K +++
Sbjct: 184 VAVVDTNCDPDDIDYVIPGNDDAIRSIRLFASSIADACIEGRELYEEKQRAESDKDDIEE 243
>gi|374291599|ref|YP_005038634.1| 30S ribosomal protein S2 [Azospirillum lipoferum 4B]
gi|357423538|emb|CBS86397.1| 30S ribosomal subunit protein S2 [Azospirillum lipoferum 4B]
Length = 260
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + +M YI+GVR G I DL+Q+ +L AL V + G
Sbjct: 8 MRQLLEAGVHFGHHTRRWNPKMNQYIFGVRNGVHIIDLEQTVPMLHRALQAVRDVVAGGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR------------ 176
VLFVG Q + + A C ++ W GM TN + + +++ R
Sbjct: 68 RVLFVGTKRQAQERVAEAAAKCGQYYVNHRWLGGMLTNWKTISQSIKRLREMEERLAGDT 127
Query: 177 ------------------------------LPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
LPD++ + +T + A+ EA K+ IP
Sbjct: 128 SGLTKREVLELTRERDKLERALGGIKEMGGLPDVIFIIDTNKESI----AVKEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
+ ++DSN +P+ + +P+PGNDD AI+ YC + A+L G +A+
Sbjct: 184 VIAVLDSNSDPDGVAFPIPGNDDALRAIEMYCDLTVGAVLDGLQAE 229
>gi|84786663|gb|ABC62845.1| ribosomal protein S2 [Erythrobacter litoralis HTCC2594]
Length = 238
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 102/218 (46%), Gaps = 40/218 (18%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A H GH+ + RMKPYI+G R G I DL Q+ L+ AL+FV A G
Sbjct: 1 MQQLIEAGSHFGHQTHRWNPRMKPYIFGARNGVHIIDLSQTVPLMARALDFVHATANAGG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDC-QEFAHTRFWRQGMFTNSEKLFRAVTRLPD----LVIL 183
VLFVG Q I + A+ Q F + R W GM TN + + +++ L L
Sbjct: 61 KVLFVGTKRQAQEPIAEAARSSGQHFVNHR-WLGGMLTNWQTISKSIKELKSLEEQLSGE 119
Query: 184 TNTLT-------------------------------TVLEPNP---AIGEAAKMCIPTVG 209
T+ LT V++ N AI EA + IP VG
Sbjct: 120 THGLTKKEVLNLTRKRDKLELSLGGIRDMGGVPDVMVVIDANKEDLAIKEANVLGIPVVG 179
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILK 247
I+D+N +P+ I +PVPGNDD A++ YC F A K
Sbjct: 180 ILDTNVDPSGIAFPVPGNDDAARAVRLYCDAFAQAASK 217
>gi|406979926|gb|EKE01616.1| hypothetical protein ACD_21C00090G0022 [uncultured bacterium]
Length = 329
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 41/223 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++ M +A VH GH++ + +M PYI+G + I +L+++ ++ + A+NF++ +A +
Sbjct: 4 ITMRQMLEAGVHFGHQVRFWNPKMAPYIFGTKSKIHIINLEKTLDMYQQAVNFLSSVAAK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRF-WRQGMFTNSEKLFRAVTRLPDLVILTN 185
G +LFVG Q LI A+ C+ + F W GM TN + + +++ RL +L L +
Sbjct: 64 RGKILFVGTKQQARSLIRSEAERCR-MPYVDFRWLGGMLTNYKTIRQSLKRLKELEALRD 122
Query: 186 TLT----------------TVLE-----------------------PNPAIGEAAKMCIP 206
T T LE N A+ EA K+ IP
Sbjct: 123 GPTFARITKKEALSIMREITKLERGLGGIREMGGLPDAVFVIDVGHENIAVSEATKLKIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
VGIVD+N P+ I Y +PGNDD+ AI+ Y Q AI+ +
Sbjct: 183 IVGIVDTNNKPDGIDYVIPGNDDSIRAIKLYLQGIVDAIIDAR 225
>gi|435853432|ref|YP_007314751.1| ribosomal protein S2 [Halobacteroides halobius DSM 5150]
gi|433669843|gb|AGB40658.1| ribosomal protein S2 [Halobacteroides halobius DSM 5150]
Length = 246
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 106/226 (46%), Gaps = 39/226 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + + VH GH+ + +M PYI+ R G I DL+Q+ +L A +F+ +A
Sbjct: 2 SVVTMKQLLETGVHFGHRTRRWNPKMDPYIFTERNGIYIVDLEQTVKLTEVAYDFIRDLA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
+LFVG Q I++ A+ C + W GM TN + + + + RL ++
Sbjct: 62 SEGKEILFVGTKKQAKQTIKQEAEKCGMPYVSERWLGGMLTNYQTISKRIRRLEEIEQME 121
Query: 181 -----VILTNTLTTVLE-------------------PNP-----------AIGEAAKMCI 205
+L N LE P+ A+ EA K+ I
Sbjct: 122 EDGLFEVLPNKEVIELERERDKLERFLGGVRHMDGLPDAIFLADPRQEEIAVAEANKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
P V IVD+NC+P+LI Y +PGNDD A++ + A+L+GK+
Sbjct: 182 PVVAIVDTNCDPDLIDYVIPGNDDAIRAVKLLTGIMADAVLEGKQG 227
>gi|377809716|ref|YP_005004937.1| 30S ribosomal protein S2 [Pediococcus claussenii ATCC BAA-344]
gi|361056457|gb|AEV95261.1| ribosomal protein S2 [Pediococcus claussenii ATCC BAA-344]
Length = 263
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 39/229 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +MKPYI+ R G I DL ++ +L+ +A NF+ +A
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMKPYIFTERNGIYIIDLQKTVKLVDNAYNFIKGVAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
DGIVLFVG Q IE+ A+ +F W G TN + + + RL DL
Sbjct: 63 EDGIVLFVGTKKQAQNAIEEEAKRAGQFYVNHRWLGGTLTNWNTIQKRIKRLKDLKKMAE 122
Query: 181 -----------VILTNTLTTVLEP------------------NP-----AIGEAAKMCIP 206
V L N LE +P A+ EA K+ IP
Sbjct: 123 DGTFDRLPKKEVALLNKQKDKLEKFLGGIEDMPRIPDVMFIVDPRKEQIAVQEAEKLNIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V +VD+N +P+ + +P NDD A++ A+++G++ + D
Sbjct: 183 VVAMVDTNSDPDQVDVIIPSNDDAIRAVRLITAKMADAVIEGRQGEDDV 231
>gi|269122999|ref|YP_003305576.1| 30S ribosomal protein S2 [Streptobacillus moniliformis DSM 12112]
gi|268314325|gb|ACZ00699.1| ribosomal protein S2 [Streptobacillus moniliformis DSM 12112]
Length = 257
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 40/229 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K++ + H GH+ + +MKPYIY R G I DL Q+ A FV IA
Sbjct: 3 VISMKELLEVGAHFGHQAKRWNPKMKPYIYAERNGLHILDLQQTLVSTEKAYEFVREIAS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
G VLFVG Q +++ A+ C F + W G+ TN E + + V +L +L
Sbjct: 63 EGGKVLFVGTKKQAQEAMKEEAERCGGFYVNQRWLGGLLTNLETIKKRVKKLKELEEMEA 122
Query: 181 -------------VIL----------------TNTLTTVL------EPNPAIGEAAKMCI 205
IL NTL L + A+ EAAK+ I
Sbjct: 123 DGTLDEAYTKKEAAILRKEMEKLQKNVGGIKEMNTLPAALFVVDIKKEFLALEEAAKLGI 182
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
P + ++DSN +P+L+TY +P NDD +I+ + +V A+++ +++
Sbjct: 183 PVIALIDSNVDPDLVTYRIPANDDAIRSIKLFAKVISQAVVEANGGQEN 231
>gi|42520395|ref|NP_966310.1| 30S ribosomal protein S2 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|61215631|sp|Q73HM1.1|RS2_WOLPM RecName: Full=30S ribosomal protein S2
gi|42410133|gb|AAS14244.1| ribosomal protein S2 [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 282
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 109/226 (48%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQI--IFDLDQSAELLRDALNFVAHIA 124
V V+D+ ++ VH GHKI + +M PYIYGV Q I DL ++ LL+ A+ + +A
Sbjct: 7 VTVRDLAESGVHFGHKISRWNAKMAPYIYGVHQENRIHIIDLRKTLPLLQVAMKALYDVA 66
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS-------------EKLF 171
++ G +LFVG Q +I A C ++ W GM TN EK+
Sbjct: 67 FQGGRILFVGTKFQAFDIIASEAIRCGQYYVNHRWLGGMLTNWGTVSSSIKTLMQYEKIL 126
Query: 172 -----------------------------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
R + +PD++ + +T + + A+ EA K
Sbjct: 127 NDEDSILTKKELGNIEKKKQKLDKALGGIREMGAIPDILFIIDT----NKEHIAVKEAKK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ IP V I+D+N +P+ ITY +PGNDD+ +I+ YC++ +IL G
Sbjct: 183 LGIPIVAILDTNSDPDGITYLIPGNDDSRKSIELYCKLATDSILAG 228
>gi|440509847|ref|YP_007347283.1| 30S ribosomal protein S2 [Candidatus Blochmannia chromaiodes str.
640]
gi|440454060|gb|AGC03552.1| 30S ribosomal protein S2 [Candidatus Blochmannia chromaiodes str.
640]
Length = 228
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 99/218 (45%), Gaps = 39/218 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++DM A VH GH+ + +MKP+I+GVR I DL+ ++ + R AL + IA
Sbjct: 4 ISIRDMLQAGVHFGHQTRYWNPKMKPFIFGVRNKIHIIDLETTSVMFRKALIELNKIAAL 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S ++KTA C +F W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASESVKKTALTCNQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTV---------------LEPNPAIGEAAKMCIPT 207
L N+L + + AI EA + IP
Sbjct: 124 GTFKKLTKKEALILNRELINLENSLGGIKNMGGLPDAIFAVGATHEHIAIKEANSLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAI 245
IVD+N NP+ I + +PGNDD AI Y + I
Sbjct: 184 FAIVDTNSNPDGIDFVIPGNDDAVRAINLYLNIISNMI 221
>gi|294140003|ref|YP_003555981.1| 30S ribosomal protein S2 [Shewanella violacea DSS12]
gi|293326472|dbj|BAJ01203.1| ribosomal protein S2 [Shewanella violacea DSS12]
Length = 242
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 45/233 (19%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R G I +L+ + + +AL F++++A +
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG S I+++A C ++ W GM TN + + +++ RL DL
Sbjct: 64 KGKVLFVGTKRAASEAIKESAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKDLESQSVD 123
Query: 181 -----------VILTNTLTTVLEP----------------------NPAIGEAAKMCIPT 207
++ T L + + + A+ EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELAKLDKSLGGIKNMGGLPDVLFIIGADHEHIAVKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK------KAKQD 254
V IVD+N +P+ I Y +PGNDD +I+ Y + A G+ +A+QD
Sbjct: 184 VAIVDTNSSPDGINYIIPGNDDAMRSIRLYTESVAAAAKSGRGQDLAVQAEQD 236
>gi|359408404|ref|ZP_09200874.1| ribosomal protein S2 [SAR116 cluster alpha proteobacterium HIMB100]
gi|356676598|gb|EHI48949.1| ribosomal protein S2 [SAR116 cluster alpha proteobacterium HIMB100]
Length = 273
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 104/223 (46%), Gaps = 39/223 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + +M+P+I+G R G I DL Q+ LL AL + A + G
Sbjct: 8 MRQLLEAGVHFGHHTRRWNPKMEPFIFGERNGIHILDLQQTVPLLGRALTAMRDTAAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI------ 182
+LFVG S I +TA+ C ++ W GM TN + +++ RL DL
Sbjct: 68 RILFVGTKRAASDKIAETAKACGQYYVNHRWLGGMLTNWATVSQSIKRLRDLEARLSSDE 127
Query: 183 ------------------LTNTLTTVLE---------------PNPAIGEAAKMCIPTVG 209
L TL + E + A+ EA K+ IP V
Sbjct: 128 VNQLGKKEILQLTRERDKLELTLGGIKEMGGLPDMLFILDTNKEDIAVLEANKLNIPVVA 187
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
++DSN +P + +P+PGNDD AI YC++ + +L G +A+
Sbjct: 188 VIDSNASPAGVDFPIPGNDDAMRAITLYCELAQATVLDGLQAE 230
>gi|89068228|ref|ZP_01155638.1| ribosomal protein S2 [Oceanicola granulosus HTCC2516]
gi|89046145|gb|EAR52203.1| ribosomal protein S2 [Oceanicola granulosus HTCC2516]
Length = 298
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 38/222 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M YIYG R G I DL Q+ +L AL + + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPKMAEYIYGARNGIHIMDLTQTVPMLDAALQAIRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-------- 180
VLFVG Q I + A+ C ++ W G TN + + +++ RL +
Sbjct: 68 RVLFVGTKRQAQKPIAEAAEKCAQYYMNHRWLGGTLTNWQTVSQSINRLRAIDEAADVGF 127
Query: 181 ---------------VILTNTLTTVLE---------------PNPAIGEAAKMCIPTVGI 210
LT +L + E + AI EA K+ IP V +
Sbjct: 128 EGLTKKERLGMEREQAKLTASLGGIREMGGVPDMLFVIDVNKEDLAIAEAKKLGIPVVAV 187
Query: 211 VDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
VD+NC+P + Y +PGNDD AI YC + A L G A+
Sbjct: 188 VDTNCSPAGVDYVIPGNDDAARAIALYCDLVSRAALDGMSAQ 229
>gi|410943177|ref|ZP_11374918.1| 30S ribosomal protein S2 [Gluconobacter frateurii NBRC 101659]
Length = 261
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 99/226 (43%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + M PY++GVR I DL Q+ LL AL V G
Sbjct: 8 MRQLLEAGVHFGHHTRRWNPAMAPYLFGVRNQVHIIDLQQTVPLLDRALKLVRETVANGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG + + + AQ C ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRAAAEHVAEAAQRCGQYYVNHRWLGGMLTNWKTITGSIKRLRQIDEMLAGDT 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T L A+ EA K+ IP
Sbjct: 128 AGLTKKEVLDITRDREKLERSLGGIKEMGGLPDLIFVIDTNKEKL----AVEEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
+GI+DSN NP +T+P+PGNDD AI YC + A+L G A+
Sbjct: 184 VIGILDSNSNPAGVTFPIPGNDDAIRAITLYCDLISGAVLDGISAE 229
>gi|392541356|ref|ZP_10288493.1| 30S ribosomal protein S2 [Pseudoalteromonas piscicida JCM 20779]
gi|409202189|ref|ZP_11230392.1| 30S ribosomal protein S2 [Pseudoalteromonas flavipulchra JG1]
Length = 242
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + DAL F+ ++A
Sbjct: 4 VSMRDMLQAGVHFGHQARYWNPKMKPFIFGARNRVHIINLEKTVPMFNDALKFLQNVASN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G +LFVG S +++ A ++F W GM TN + + +++ RL +L
Sbjct: 64 KGKILFVGTKRAASEAVKEAAIQSEQFYVNHRWLGGMLTNWKTVRQSIKRLKELETQSQD 123
Query: 181 -----------VILTNTLTTVLE-----------PNP-----------AIGEAAKMCIPT 207
++LT + + + P+ AI EA + IP
Sbjct: 124 GTFEKLTKKEALMLTREMQKLEKGLGGIKDMGGLPDAIFVIDADHEHIAIREANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V +VD+N NP+ + + +PGNDD AIQ Y TAI +G+++
Sbjct: 184 VSVVDTNSNPDGVDFIIPGNDDAIRAIQLYTGAVATAITEGRES 227
>gi|223041501|ref|ZP_03611704.1| 30S ribosomal protein S2 [Actinobacillus minor 202]
gi|223017759|gb|EEF16166.1| 30S ribosomal protein S2 [Actinobacillus minor 202]
Length = 236
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 104/224 (46%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM +A VH GH+ + +MKP+I+G R G I +L+++ L +AL + I+
Sbjct: 4 VSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHIINLEKTLPLFNEALAELTRISSN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
+G VLFVG S ++ A DCQ+F W GM TN + + +++ RL DL T
Sbjct: 64 NGKVLFVGTKRAASDAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQTQD 123
Query: 186 -----------------------TLTTVLEPNP---------------AIGEAAKMCIPT 207
+L + + N AI EA + IP
Sbjct: 124 GTFDKITKKEALMRTRELEKLELSLGGIKDMNGLPDAIFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
IVD+N P+ + Y +PGNDD AIQ Y AI +GK A
Sbjct: 184 FAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDSVVAAIKEGKGA 227
>gi|116620034|ref|YP_822190.1| 30S ribosomal protein S2 [Candidatus Solibacter usitatus Ellin6076]
gi|122255565|sp|Q02AL1.1|RS2_SOLUE RecName: Full=30S ribosomal protein S2
gi|116223196|gb|ABJ81905.1| SSU ribosomal protein S2P [Candidatus Solibacter usitatus
Ellin6076]
Length = 303
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 40/223 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K++ +A VH GH+ + +MK YI+G R G I DL ++ ++ +DA FV +A +
Sbjct: 4 ISMKELLEAGVHFGHQTKRWNPKMKEYIFGERNGIYIIDLQKTLKMFKDAARFVGEMAAQ 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
VLFVG Q I + A CQ + + W G+ TN + +++ RL +L + +
Sbjct: 64 GKNVLFVGTKRQAQEAIAEEANRCQMYYVNQRWLGGLLTNMLTVQKSIKRLKELEAMASV 123
Query: 187 -------------------------------------LTTVLEPNP---AIGEAAKMCIP 206
+ V++ N A+ EA ++ IP
Sbjct: 124 EGGYAGRPKKEVIRLERERKHLDQNLSGIKDMPGLPDVLFVIDSNKEGIAVKEARRLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
V IVD+NC+P+ + + +PGNDD AI+ + A+++G+
Sbjct: 184 VVAIVDTNCDPDEVDWVIPGNDDALRAIRLFASKIADAVVEGR 226
>gi|376403687|ref|YP_005090048.1| rps2 gene product (chloroplast) [Fucus vesiculosus]
gi|269991250|emb|CAX12428.1| 30S ribosomal protein S2 [Fucus vesiculosus]
Length = 231
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 108/235 (45%), Gaps = 50/235 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+++ + +A VH GHK + +M PYIY R G I DL Q+ E L+ A +F + +
Sbjct: 4 IELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKKASAK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN----------------SEKL 170
+ LFVG + S LI AQ C F W G TN EKL
Sbjct: 64 NQTFLFVGTKKRASSLIASEAQKCGAFYINHRWLGGTLTNWITIKGRIQRLNNLEEQEKL 123
Query: 171 ---------------------------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKM 203
+ + ++PD++++ + ++ AI EA +
Sbjct: 124 TSFKNLPKKEASNLKKELEKLKKYFNGIKGMKKIPDILVIIDQKREII----AIQEALSL 179
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
IP + I+D+NC+PNL T P+PGNDD+ +I+Y + +I G +Q++LK+
Sbjct: 180 NIPIISIIDTNCDPNLATIPIPGNDDSIRSIKYIIKNISDSICLG---QQNSLKV 231
>gi|386346594|ref|YP_006044843.1| 30S ribosomal protein S2 [Spirochaeta thermophila DSM 6578]
gi|339411561|gb|AEJ61126.1| ribosomal protein S2 [Spirochaeta thermophila DSM 6578]
Length = 315
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 39/221 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K++ ++ VH GH+ D RMK YI+ R G I DL ++ + +++A V
Sbjct: 3 VVTMKNLLESGVHFGHQKRRWDPRMKKYIFAERNGIHIIDLQKTIQAIKEAYEVVRKTVL 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL--VIL 183
VLFVG Q I++ A+ C F W G TN E + +++ RL L + +
Sbjct: 63 SGKSVLFVGTKRQAQAAIQREAERCGMFYVNHRWLGGTLTNFETIKKSILRLKKLEKMEV 122
Query: 184 TNTLTTV--------------LEPN-----------------------PAIGEAAKMCIP 206
T T+ L+ N A+ EA K+ IP
Sbjct: 123 DGTFATMSKKEVSRLMKEKARLQRNLGGIKEMKELPGVVFIIDTKHEAIAVAEAKKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILK 247
+G+VD+NCNP +I +P+PGNDD AI + ++ A+++
Sbjct: 183 IIGVVDTNCNPEIIDHPIPGNDDAIRAINLFTKIIADAVIE 223
>gi|71892053|ref|YP_277783.1| 30S ribosomal protein S2 [Candidatus Blochmannia pennsylvanicus
str. BPEN]
gi|123734156|sp|Q493D2.1|RS2_BLOPB RecName: Full=30S ribosomal protein S2
gi|71796159|gb|AAZ40910.1| 30S ribosomal subunit protein S2 [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 228
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 99/218 (45%), Gaps = 39/218 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++DM A VH GH+ + +MKP+I+GVR I DL+ ++ + R AL + IA
Sbjct: 4 ISIRDMLQAGVHFGHQTRYWNPKMKPFIFGVRNKIHIIDLETTSVMFRQALIELNKIAAL 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S ++KTA C +F W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASESVKKTALACNQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTV---------------LEPNPAIGEAAKMCIPT 207
L N+L + + AI EA + IP
Sbjct: 124 GTFKKLTKKEALILNRELINLENSLGGIKNMGGLPDAIFAVGATHEHIAIKEANSLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAI 245
IVD+N NP+ I + +PGNDD AI Y + I
Sbjct: 184 FAIVDTNSNPDGIDFVIPGNDDAVRAINLYLNIISNMI 221
>gi|336317528|ref|ZP_08572380.1| ribosomal protein S2 [Rheinheimera sp. A13L]
gi|335878150|gb|EGM76097.1| ribosomal protein S2 [Rheinheimera sp. A13L]
Length = 242
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+Q+ ++ DAL F+ +A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNRVHIINLEQTVPMMNDALAFIQSVAAK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S I++ A ++ W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAIKEAASQVDQYYVNHRWLGGMLTNWKTVRQSIKRLKDLESQSQD 123
Query: 183 --------------------LTNTLTTVLE---------------PNPAIGEAAKMCIPT 207
L +L + + + AI EA + IP
Sbjct: 124 GTFDKLTKKEALDRTREMDKLEKSLGGIKDMGGLPDVLFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
V IVD+N +P + Y +PGNDD AIQ Y AI +G+
Sbjct: 184 VSIVDTNSDPKGVDYVIPGNDDAIRAIQLYLGAVNQAITEGR 225
>gi|254462701|ref|ZP_05076117.1| ribosomal protein S2 [Rhodobacterales bacterium HTCC2083]
gi|206679290|gb|EDZ43777.1| ribosomal protein S2 [Rhodobacteraceae bacterium HTCC2083]
Length = 256
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 99/226 (43%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM P+IYG R G I DL Q+ +L ALN + + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMGPFIYGARNGIHIMDLTQTVPMLDAALNAIRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
+LFVG Q + + A+ C ++ W G TN + + +++ RL
Sbjct: 68 RILFVGTKRQAAAPVAAAAEQCAQYYMNHRWLGGTLTNWKTVSQSINRLKSIDEKFETGF 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + L AI EA K+ IP
Sbjct: 128 EGLTKKERLGMERDQGKLQASLGGIREMGGVPDLIFVIDVKKEAL----AIAEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V +VDSNC+P+ I Y +PGNDD AI Y + A L G A+
Sbjct: 184 VVAVVDSNCSPDGIDYIIPGNDDAARAIALYTDLAARAALDGMSAQ 229
>gi|444910053|ref|ZP_21230241.1| SSU ribosomal protein S2p (SAe) [Cystobacter fuscus DSM 2262]
gi|444719651|gb|ELW60443.1| SSU ribosomal protein S2p (SAe) [Cystobacter fuscus DSM 2262]
Length = 324
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 39/221 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++ + +A VH GH+ + +MKP+I+G R G I DL ++ + R A FVA I R
Sbjct: 18 ITMRQLLEAGVHFGHQTKRWNPKMKPFIFGARNGIYIIDLQKTVNMARAAFRFVADITAR 77
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
G VLFVG Q +I++ A+ +F T W G TN + + + + RL L +
Sbjct: 78 GGSVLFVGTKKQAQDVIQEEARRSGQFFVTSRWLGGTLTNFKTIKQGIDRLKTLEKMAED 137
Query: 187 LT------------------------------------TVLEPNP---AIGEAAKMCIPT 207
T V++P A+ EA ++ IP
Sbjct: 138 GTFERLPKKEVATLEREREKLEKNLGGVKEMTKLPKCLFVIDPKKEHIAVHEANRLGIPV 197
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+G+VD+NC+P+ I + +PGNDD +I+ + + ++G
Sbjct: 198 IGVVDTNCDPDGIDFVIPGNDDAIRSIKLFTSKVAESCIEG 238
>gi|404493559|ref|YP_006717665.1| 30S ribosomal protein S2 [Pelobacter carbinolicus DSM 2380]
gi|123743012|sp|Q3A395.1|RS2_PELCD RecName: Full=30S ribosomal protein S2
gi|77545600|gb|ABA89162.1| ribosomal protein S2 [Pelobacter carbinolicus DSM 2380]
Length = 267
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 108/238 (45%), Gaps = 41/238 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K + +A VH GH+ + +MKPYI+G R G I DL ++ + A F+
Sbjct: 4 VSMKQLLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRYFKSAYQFIRETVQN 63
Query: 127 DGIVLFVGQSAQNSLLI-EKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
VLFVG Q I E+TA+ Q + R W GM TN + +++ RL + ++
Sbjct: 64 GDKVLFVGTKKQAQEAIREETARADQFYIDNR-WLGGMLTNFATIKKSIERLKKIEVMAQ 122
Query: 186 TLTT------------------------------------VLEPNP---AIGEAAKMCIP 206
T V++P A+ EA K+ IP
Sbjct: 123 DGTYELLTKKEALNLEREREKLEKTLGGIKGMNKLPGAIFVIDPKKETIAVKEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQE 264
V +VD+NC+P+ I Y +PGNDD AI+ + A + G +A++ ++ S+K E
Sbjct: 183 VVAVVDTNCDPDDIDYIIPGNDDAIRAIRLFAAKMADACIDGAQAREAAIRAESDKAE 240
>gi|307718988|ref|YP_003874520.1| 30S ribosomal protein S2 [Spirochaeta thermophila DSM 6192]
gi|306532713|gb|ADN02247.1| 30S ribosomal protein S2 [Spirochaeta thermophila DSM 6192]
Length = 316
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 39/221 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K++ ++ VH GH+ D RMK YI+ R G I DL ++ + +++A V
Sbjct: 3 VVTMKNLLESGVHFGHQKRRWDPRMKKYIFAERNGIHIIDLQKTIQAIKEAYEVVRKTVL 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL--VIL 183
VLFVG Q I++ A+ C F W G TN E + +++ RL L + +
Sbjct: 63 SGKSVLFVGTKRQAQAAIQREAERCGMFYVNHRWLGGTLTNFETIKKSILRLKKLEKMEV 122
Query: 184 TNTLTTV--------------LEPN-----------------------PAIGEAAKMCIP 206
T T+ L+ N A+ EA K+ IP
Sbjct: 123 DGTFATMSKKEVSRLMKEKARLQRNLGGIKEMKELPGVVFIIDTKHEAIAVAEAKKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILK 247
+G+VD+NCNP +I +P+PGNDD AI + ++ A+++
Sbjct: 183 IIGVVDTNCNPEIIDHPIPGNDDAIRAINLFSKIIADAVIE 223
>gi|300813723|ref|ZP_07094043.1| ribosomal protein S2 [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300512180|gb|EFK39360.1| ribosomal protein S2 [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 274
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 115/243 (47%), Gaps = 39/243 (16%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +M +I+ R G I DL ++ + + +A +F I+
Sbjct: 2 SVISMKSLLEAGVHFGHQTRRWNPKMSKFIFTERNGIYIIDLQKTVKKIEEAYDFAREIS 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
G +LFVG Q IEK A+ C+ + W G+ TN + + + + RL L+ +
Sbjct: 62 ANGGKILFVGTKKQAQDAIEKEAKKCEMPFINQRWLGGLLTNYKTIRKRIDRLFKLIEME 121
Query: 185 NTLT------------------------------------TVLEPNP---AIGEAAKMCI 205
+ T +++P A+ EA + I
Sbjct: 122 DDGTFDVLPKKEVIQLIHERERLEKFLGGIKDMDKMPDALYIVDPKKEKIAVKEAHILGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEV 265
P +GIVD+NC+P+ + +P+PGNDD A++ + A+L+GK+ Q+ ++ E +
Sbjct: 182 PVIGIVDTNCDPDELDFPIPGNDDAIRAVKLITETIANAVLEGKQGTQNVVEDDEENLDT 241
Query: 266 QHN 268
+ N
Sbjct: 242 EEN 244
>gi|77360960|ref|YP_340535.1| 30S ribosomal protein S2 [Pseudoalteromonas haloplanktis TAC125]
gi|123588801|sp|Q3IIX4.1|RS2_PSEHT RecName: Full=30S ribosomal protein S2
gi|76875871|emb|CAI87092.1| 30S ribosomal subunit protein S2 [Pseudoalteromonas haloplanktis
TAC125]
Length = 242
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 42/237 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+Q+ + AL F++ A
Sbjct: 4 VSMRDMLQAGVHFGHQARYWNPKMKPFIFGTRNRVHIINLEQTVPMFNTALKFLSGAAAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G VLFVG S ++++A ++ W GM TN + + +++ RL DL I
Sbjct: 64 KGKVLFVGTKRAASEAVKESAIASDQYYVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 -----LTNTLTTVLE-------------------PNP-----------AIGEAAKMCIPT 207
LT T +L P+ AI EA + IP
Sbjct: 124 GTFEKLTKKETLMLNREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAIREANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQE 264
V IVD+N NP+ + + VPGNDD A+ Y TAI +G +++TL +EK +
Sbjct: 184 VAIVDTNSNPDGVDFIVPGNDDAIRAVSLYTNAVATAITEG---RENTLVAQAEKDD 237
>gi|337754237|ref|YP_004646748.1| 30S ribosomal protein S2 [Francisella sp. TX077308]
gi|336445842|gb|AEI35148.1| SSU ribosomal protein S2p (SAe) [Francisella sp. TX077308]
Length = 239
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 100/217 (46%), Gaps = 39/217 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K+M A VH GHK + +MK YI+G+ G I +L+++ L +DA+NFV G
Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-------- 180
VLFVG Q +IE A+ C + W GM TN + + +++ RL L
Sbjct: 64 KVLFVGTKRQAQDIIEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMKEDGT 123
Query: 181 -------VILTNTLT---------------------TVLEPNP---AIGEAAKMCIPTVG 209
+L N T V++ N AI EA K+ I V
Sbjct: 124 LDSLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVS 183
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAIL 246
IVD+N NP I Y +PGNDD +I +Y F A++
Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMAKFADAVI 220
>gi|222100791|ref|YP_002535359.1| 30S ribosomal protein S2 [Thermotoga neapolitana DSM 4359]
gi|221573181|gb|ACM23993.1| 30S ribosomal protein S2 [Thermotoga neapolitana DSM 4359]
Length = 265
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 47/229 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M PYIY R+G I DL ++ +LL +A FV A
Sbjct: 8 VVTMKQLLEAGVHFGHRTRRWNPKMAPYIYTERKGIYIIDLQKTQQLLEEAYYFVREKAS 67
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+LFVG Q +I+ A+ C F W G+ TN
Sbjct: 68 EGATILFVGTKKQAQGVIKAEAERCGAFYVNNRWLGGLLTNFKTIRSRIDKLIELEEMEQ 127
Query: 167 ------------------SEKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL + + +LPD+V + + + A+ EA K
Sbjct: 128 SGKLDELPKKEQSRIRRVLEKLRKNLGGLKEMRKLPDIVYIVDPRKEKI----AVAEANK 183
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+ IP V IVD+NC+P+ I Y +PGNDD +I+ V A L+G++
Sbjct: 184 LGIPIVAIVDTNCDPDPIDYVIPGNDDAIRSIKLITSVIADAYLEGREG 232
>gi|407775126|ref|ZP_11122422.1| 30S ribosomal protein S2 [Thalassospira profundimaris WP0211]
gi|407282074|gb|EKF07634.1| 30S ribosomal protein S2 [Thalassospira profundimaris WP0211]
Length = 259
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 46/222 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + +MKPYI+G R I +L ++ +L A+ V + G
Sbjct: 8 MRQLMEAGVHFGHHTRRWNPKMKPYIFGARNDIHILNLQETVPMLHRAMQAVRDVTASGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S +I A+ C ++ W GM TN
Sbjct: 68 RVLFVGTKRQASPIIADAAKRCGQYYVNHRWLGGMLTNWNTVSNSIKRLKEQDEILNAGA 127
Query: 167 --------------SEKLFRA------VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
+KL RA + LPD++++ +T L AI +A + IP
Sbjct: 128 EGLTKKEILNLTRSRDKLERALGGIKDMGGLPDIIVVVDTNKESL----AIQDAKNLNIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
V I+DSN +P + +PVPGNDD AIQ YC +F ++L G
Sbjct: 184 VVAILDSNSDPANVQFPVPGNDDAIRAIQLYCDLFVGSVLDG 225
>gi|384228235|ref|YP_005619970.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
gi|345539168|gb|AEO08035.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
Length = 237
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 108/230 (46%), Gaps = 41/230 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ ++DM A VH GH+ + +MKP+I+GVR I +L+++ + ALN + I
Sbjct: 3 MISMRDMLKAGVHFGHQTRYWNPKMKPFIFGVRNKVHIINLEKTLPMFNLALNELKKIYL 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI--- 182
R G +LFVG S I++TA +C++F W GM TN + + +++ RL DL I
Sbjct: 63 RKGRILFVGTKRAASKGIKETAINCEQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEIESK 122
Query: 183 ---------------------LTNTLTTV---------------LEPNPAIGEAAKMCIP 206
L N+L + N AI EA + IP
Sbjct: 123 DGTFSKLTKKEALIRSRELYKLENSLGGIKNMGGLPDCLFVIDAAHENIAIKEANNLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTL 256
IVD+N NP+ + Y +PGNDD ++ Y + +++ K DTL
Sbjct: 183 VFAIVDTNSNPDGVDYIIPGNDDAIRSVTLYLKF--VSLIFSKINHNDTL 230
>gi|114799137|ref|YP_760472.1| 30S ribosomal protein S2 [Hyphomonas neptunium ATCC 15444]
gi|122942421|sp|Q0C1C1.1|RS2_HYPNA RecName: Full=30S ribosomal protein S2
gi|114739311|gb|ABI77436.1| ribosomal protein S2 [Hyphomonas neptunium ATCC 15444]
Length = 263
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 95/219 (43%), Gaps = 39/219 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RMKPYIYG R G I DL + L +L FV + G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPRMKPYIYGERSGIHIMDLSHTVPALHQSLVFVRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q + + AQ C ++ W G TN
Sbjct: 68 RVLFVGTKRQAQEPVAEAAQRCAQYYMNHRWLGGTLTNWSTVSNSIKQLRELNAMFESGG 127
Query: 167 ---------------SEKLFRAVTRLPDLVILTNTLTTVLEPNPAIG--EAAKMCIPTVG 209
+KL +++ + D+ L + + AI EA K+ IP V
Sbjct: 128 GSGLTKKELLDLQRRRDKLQKSLGGIADMGGLPAAIVVIDTNKEAIAVQEARKLGIPVVA 187
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
++D+NCNP+ + PGNDD AI YC +F A+L G
Sbjct: 188 VLDTNCNPSDADFGFPGNDDAARAISLYCNLFADAVLDG 226
>gi|387885941|ref|YP_006316240.1| 30S ribosomal protein S2 [Francisella noatunensis subsp. orientalis
str. Toba 04]
gi|386870757|gb|AFJ42764.1| 30S ribosomal protein S2 [Francisella noatunensis subsp. orientalis
str. Toba 04]
Length = 239
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 102/218 (46%), Gaps = 41/218 (18%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K+M A VH GHK + +MK YI+G+ G I +L+++ L ++A+NFV G
Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVSLFQEAVNFVGKTVANGG 63
Query: 129 IVLFVGQSAQNSLLIEKTAQDC-QEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------- 180
VLFVG Q +IE A+ C F R W GM TN + + +++ RL L
Sbjct: 64 KVLFVGTKRQAQDIIEAEAKRCGMPFVSYR-WLGGMLTNYKTVRQSIKRLAQLEKMKEDG 122
Query: 181 --------VILTNTLT---------------------TVLEPNP---AIGEAAKMCIPTV 208
+L N T V++ N AI EA K+ I V
Sbjct: 123 TLDSLTKKEMLQNIRTIEKLEKVLGGIKKMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVV 182
Query: 209 GIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAIL 246
IVD+N NP I Y +PGNDD +I +Y + F A++
Sbjct: 183 SIVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVI 220
>gi|262369542|ref|ZP_06062870.1| 30S ribosomal protein S2 [Acinetobacter johnsonii SH046]
gi|262315610|gb|EEY96649.1| 30S ribosomal protein S2 [Acinetobacter johnsonii SH046]
Length = 249
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 107/239 (44%), Gaps = 39/239 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++D+ A H GH+ + +M+ YI+G R I +L+ + L DALNFV ++A +
Sbjct: 6 VSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFVNNLASK 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
VLFVG S +I + AQ + W GM TN + L +++ RL DL +
Sbjct: 66 KNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQD 125
Query: 186 ------TLTTVLE---------------------PNP-----------AIGEAAKMCIPT 207
T LE P+ AI EA + IP
Sbjct: 126 GTFAKLTKREALERTREMEKLERALGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPV 185
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEVQ 266
+GIVD+N NP+ + Y +PGNDD A+ Y AIL GK+ Q ++ +E +
Sbjct: 186 IGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKVEEAK 244
>gi|238792755|ref|ZP_04636386.1| 30S ribosomal protein S2 [Yersinia intermedia ATCC 29909]
gi|238727863|gb|EEQ19386.1| 30S ribosomal protein S2 [Yersinia intermedia ATCC 29909]
Length = 241
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ L +AL + I+ R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELKKISSR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S ++ A +C +F W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASEAVKDAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A++ Y TA+ +G+
Sbjct: 184 FSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLNAVATAVTEGR 225
>gi|149039192|gb|EDL93412.1| mitochondrial ribosomal protein S2 (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 170
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 74/112 (66%)
Query: 33 PLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKP 92
P+P+ S + D Q + PL++ D+F V+ L VK +F+A+VHLGHK G M+P
Sbjct: 42 PVPAVSEPQDGDDFQSRILDVPLQHSDFFNVKELFSVKSLFEARVHLGHKAGCRHRFMEP 101
Query: 93 YIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIE 144
YI+G R GQ I DLDQ+A L+ ALNF AH+AYR GI+LFV ++ Q S L E
Sbjct: 102 YIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYRKGIILFVSRNRQFSHLDE 153
>gi|406907321|gb|EKD48186.1| 30S ribosomal protein S2 [uncultured bacterium]
Length = 229
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 47/229 (20%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
N+ ++K+M VH GH + +MK YIYG +QG +FDL+++ L AL+F++
Sbjct: 5 NVKELKEMLKNAVHFGHATSKWNPKMKKYIYGEKQGIHVFDLEKTQACLEKALDFLSKSV 64
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------ 166
V+F+ Q + L+++ A+DC T+ W G+ TN
Sbjct: 65 KEGKTVMFISTKQQVTDLVKEAAKDCGVPYVTQKWVPGLLTNFRTIKQRIRYLKKLKDEE 124
Query: 167 ------------SEKLFRAVTRL-------------PDLVILTNTLTTVLEPNPAIGEAA 201
+ +L + + +L PD+VI+ + V A+ EA+
Sbjct: 125 TTGEFSKYTKKEASELKKTINKLEISLGGVQDLMKPPDIVIILD----VYRDEIAVKEAS 180
Query: 202 KMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
+ + +G+ DSN NP+LI YP+P NDD ++ Y FK I GKK
Sbjct: 181 RTGVKIIGLADSNANPSLIDYPIPANDDAIKSLTYMVNKFKDTIKAGKK 229
>gi|443925857|gb|ELU44618.1| ribosomal protein subunit S2 [Rhizoctonia solani AG-1 IA]
Length = 318
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 91/184 (49%), Gaps = 11/184 (5%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+ A HLG S PY YG R G I DLD + LLR A N V +A G++L
Sbjct: 112 LVAAGAHLGSSSESTRPTFLPYAYGHRAGITIIDLDTTLPLLRRASNVVREVAKSKGLIL 171
Query: 132 FVGQSAQNSLLIEKTAQ--DCQEFAHTRFWRQGMFTNSEKLFRAVTRL-----PDLVILT 184
FVG + + + K AQ Q F W+ G TNS +LF + T + PDLVI
Sbjct: 172 FVGTTEDLAPCVRKAAQRLGSQGFHVGTTWKPGTLTNSWELFGSDTMMNLNTTPDLVIFM 231
Query: 185 NTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTA 244
N L + AI E A IPT+GI+DS+ +P ++ YP+P NDD+ + V A
Sbjct: 232 NPLQNLH----AIRECAISRIPTIGIIDSDVDPRVVMYPIPANDDSIRTAELIAGVLSMA 287
Query: 245 ILKG 248
+G
Sbjct: 288 GKEG 291
>gi|240949046|ref|ZP_04753398.1| 30S ribosomal protein S2 [Actinobacillus minor NM305]
gi|240296559|gb|EER47182.1| 30S ribosomal protein S2 [Actinobacillus minor NM305]
Length = 236
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 104/224 (46%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM +A VH GH+ + +MKP+I+G R G I +L+++ L +AL + I+
Sbjct: 4 VSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHIINLEKTLPLFNEALAELTRISSN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
+G VLFVG S ++ A DCQ+F W GM TN + + +++ RL DL T
Sbjct: 64 NGKVLFVGTKRAASDAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQTQD 123
Query: 186 -----------------------TLTTVLEPNP---------------AIGEAAKMCIPT 207
+L + + N AI EA + IP
Sbjct: 124 GTFDKITKKEALMRTRELEKLELSLGGIKDMNGLPDAIFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
IVD+N P+ + Y +PGNDD AIQ Y AI +GK A
Sbjct: 184 FAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDSAVAAIKEGKGA 227
>gi|357977445|ref|ZP_09141416.1| 30S ribosomal protein S2 [Sphingomonas sp. KC8]
Length = 251
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 107/237 (45%), Gaps = 42/237 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ + DA H GH+ + +MKPYI+G R G I DL Q+ L+ AL+F++
Sbjct: 6 VSMQALLDAGAHFGHQTHRWNPKMKPYIFGDRNGVHIIDLSQTVPLMARALDFISQTVAH 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----PDLVI 182
G VLFVG Q I + A+ + W GM TN + + ++ R L
Sbjct: 66 GGKVLFVGTKRQAQEPIAEAARRSGQHYVNHRWLGGMLTNWKTISGSIKRFKTLEEQLSG 125
Query: 183 LTNTLTT-------------------------------VLEPNP---AIGEAAKMCIPTV 208
T+ LT V++ N AI EA + IP V
Sbjct: 126 DTHGLTKKEVLQLTRERDKFELSLGGIRDMGGIPDVMFVIDANKEELAIKEANTLGIPVV 185
Query: 209 GIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILK----GKKAKQDTLKLLSE 261
I+DSN +P+ I +PVP NDD AI+ YC+ TA + G+ A+ + L L+E
Sbjct: 186 AILDSNVSPDGIAFPVPANDDAARAIRLYCEAVATAATRGDQGGRAARGEDLGALAE 242
>gi|134302597|ref|YP_001122568.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|208780543|ref|ZP_03247882.1| ribosomal protein S2 [Francisella novicida FTG]
gi|254372204|ref|ZP_04987696.1| ribosomal protein S2 [Francisella tularensis subsp. novicida
GA99-3549]
gi|254373687|ref|ZP_04989171.1| hypothetical protein FTDG_01696 [Francisella novicida GA99-3548]
gi|385792163|ref|YP_005825139.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|421752482|ref|ZP_16189507.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
AS_713]
gi|421754348|ref|ZP_16191323.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
831]
gi|421758079|ref|ZP_16194939.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
80700103]
gi|421759910|ref|ZP_16196734.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
70102010]
gi|424675232|ref|ZP_18112141.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
70001275]
gi|166225273|sp|A4IZU6.1|RS2_FRATW RecName: Full=30S ribosomal protein S2
gi|134050374|gb|ABO47445.1| ribosomal protein S2 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|151569934|gb|EDN35588.1| ribosomal protein S2 [Francisella novicida GA99-3549]
gi|151571409|gb|EDN37063.1| hypothetical protein FTDG_01696 [Francisella novicida GA99-3548]
gi|208743518|gb|EDZ89823.1| ribosomal protein S2 [Francisella novicida FTG]
gi|328676309|gb|AEB27179.1| SSU ribosomal protein S2p (SAe) [Francisella cf. novicida Fx1]
gi|409084872|gb|EKM85033.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
831]
gi|409085066|gb|EKM85219.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
AS_713]
gi|409089827|gb|EKM89859.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
70102010]
gi|409090649|gb|EKM90662.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
80700103]
gi|417434181|gb|EKT89149.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
70001275]
Length = 239
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 101/217 (46%), Gaps = 39/217 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K+M A VH GHK + +MK YI+G+ G I +L+++ L +DA+NFV G
Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-------- 180
+LFVG Q ++E A+ C + W GM TN + + +++ RL L
Sbjct: 64 KILFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123
Query: 181 -------VILTNTLT---------------------TVLEPNP---AIGEAAKMCIPTVG 209
+L N T V++ N AI EA K+ I V
Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVA 183
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAIL 246
IVD+N NP I Y +PGNDD +I +Y + F A++
Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVI 220
>gi|118496840|ref|YP_897890.1| 30S ribosomal protein S2 [Francisella novicida U112]
gi|194324476|ref|ZP_03058248.1| ribosomal protein S2 [Francisella novicida FTE]
gi|166225272|sp|A0Q4H1.1|RS2_FRATN RecName: Full=30S ribosomal protein S2
gi|118422746|gb|ABK89136.1| 30S ribosomal protein S2 [Francisella novicida U112]
gi|194321311|gb|EDX18797.1| ribosomal protein S2 [Francisella tularensis subsp. novicida FTE]
Length = 239
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 101/217 (46%), Gaps = 39/217 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K+M A VH GHK + +MK YI+G+ G I +L+++ L +DA+NFV G
Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-------- 180
+LFVG Q ++E A+ C + W GM TN + + +++ RL L
Sbjct: 64 KILFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123
Query: 181 -------VILTNTLT---------------------TVLEPNP---AIGEAAKMCIPTVG 209
+L N T V++ N AI EA K+ I V
Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVA 183
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAIL 246
IVD+N NP I Y +PGNDD +I +Y + F A++
Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVI 220
>gi|348029862|ref|YP_004872548.1| 30S ribosomal protein S2 [Glaciecola nitratireducens FR1064]
gi|347947205|gb|AEP30555.1| ribosomal protein S2 [Glaciecola nitratireducens FR1064]
Length = 244
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 41/237 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +M YI+G R I +L+++ L +AL++++ ++++
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMAQYIFGARNRVHIINLEKTVPLFNEALSYLSGVSHK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G +LFVG S +++ A+ +F + W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVKEAAEKSGQFYVNKRWLGGMLTNWKTVRQSIKRLKDLEVQSTD 123
Query: 181 ----------VILTNTLTTVLEPN-----------------------PAIGEAAKMCIPT 207
V++ T LE + A+ EA + IP
Sbjct: 124 GTFDKITKKEVLMLKREMTKLEGSLGGIKNMGGLPDVIFVIDADHEHIAVTEARNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQE 264
VG+VD+N NP+ + Y +PGNDD A+ Y AI +G+ QD + +EK +
Sbjct: 184 VGVVDTNSNPDGVDYIIPGNDDAIRAVNLYTSAAADAINEGR--NQDVVIASTEKDD 238
>gi|406669324|ref|ZP_11076603.1| ribosomal protein S2 [Facklamia ignava CCUG 37419]
gi|405583837|gb|EKB57768.1| ribosomal protein S2 [Facklamia ignava CCUG 37419]
Length = 262
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 103/229 (44%), Gaps = 47/229 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ D +MKPYI+ R G I DL Q+ +L+ A NFV
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWDPKMKPYIFTERNGIYIIDLQQTVKLVDKAYNFVRDEVS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVT---------- 175
GIVLFVG Q + IE+ A+ ++ W G+ TN E + +++
Sbjct: 63 NGGIVLFVGTKKQAAQSIEEQAKRAGQYYINHRWLGGLLTNWETIQQSIKRLKRIEEMEQ 122
Query: 176 ---------------------------------RLPDLVILTNTLTTVLEPNPAIGEAAK 202
RLPD++ + + + A+ EA K
Sbjct: 123 DGTFDVLPKKEVQELRKELDRLEQNLGGIKDMPRLPDVIYIVDPRKEQI----AVKEARK 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+ IP VG+VD+NC+P + Y +P NDD AI+ A+++G +
Sbjct: 179 LNIPLVGMVDTNCDPEEVDYVIPSNDDAIRAIKLITTAIADAVIEGNQG 227
>gi|304316878|ref|YP_003852023.1| 30S ribosomal protein S2 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433655021|ref|YP_007298729.1| ribosomal protein S2 [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|302778380|gb|ADL68939.1| ribosomal protein S2 [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|433293210|gb|AGB19032.1| ribosomal protein S2 [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 235
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 39/230 (16%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +M PYI+ R G I DL ++ + + +A +F+ +
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKIEEAYDFIKEVV 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
+G VLFVG Q +++ A+ C + + W GM TN + + V RL +L +
Sbjct: 62 SNNGTVLFVGTKKQAQDSVKEEAERCGMYYVNQRWLGGMLTNYKTIRSRVERLKELKRME 121
Query: 185 N------------------------------------TLTTVLEPNP---AIGEAAKMCI 205
++ V++P AI EA + I
Sbjct: 122 EDGTFDVLPKKEVIKLKKEKEKLEKYLGGIENMNGIPSVLFVVDPKKEAIAIAEAKNLDI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
P V IVD+NC+P + YP+PGNDD A++ A+++ K+ +Q T
Sbjct: 182 PIVAIVDTNCDPEEVDYPIPGNDDAIRAVKLIASKIADAVIEAKQGEQLT 231
>gi|238784880|ref|ZP_04628880.1| 30S ribosomal protein S2 [Yersinia bercovieri ATCC 43970]
gi|238787235|ref|ZP_04631034.1| 30S ribosomal protein S2 [Yersinia frederiksenii ATCC 33641]
gi|238714197|gb|EEQ06209.1| 30S ribosomal protein S2 [Yersinia bercovieri ATCC 43970]
gi|238724497|gb|EEQ16138.1| 30S ribosomal protein S2 [Yersinia frederiksenii ATCC 33641]
Length = 241
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ L +AL + I+ R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELKKISSR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A +C +F W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A++ Y TA+ +G+
Sbjct: 184 FSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLSAVATAVNEGR 225
>gi|257439094|ref|ZP_05614849.1| ribosomal protein S2 [Faecalibacterium prausnitzii A2-165]
gi|257198472|gb|EEU96756.1| ribosomal protein S2 [Faecalibacterium prausnitzii A2-165]
Length = 257
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 97/227 (42%), Gaps = 39/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +MK YI+ R G I DL ++ + L +A N+V +A
Sbjct: 21 VVSMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKLDEAYNYVKEVAA 80
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G +LFVG Q I A C W GM TN + + + R+ L +
Sbjct: 81 EGGDILFVGTKKQAQESIRDEALRCGMHYVNARWLGGMLTNFRTIRKRIDRMDQLAKMKE 140
Query: 186 TLTTVLEPNP---------------------------------------AIGEAAKMCIP 206
T L P A+ EA K+ IP
Sbjct: 141 NGTFELLPKKEVAKLELEMEKLDKYLGGVKNMKTLPKAMFIVDPHKERIAVAEARKLNIP 200
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V IVD+NCNP+ I Y +PGNDD A++ A+L+GK+ Q
Sbjct: 201 IVAIVDTNCNPDEIDYVIPGNDDAIRAVKLIAGAMADAVLEGKQGNQ 247
>gi|254421050|ref|ZP_05034774.1| ribosomal protein S2 [Brevundimonas sp. BAL3]
gi|196187227|gb|EDX82203.1| ribosomal protein S2 [Brevundimonas sp. BAL3]
Length = 302
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 101/221 (45%), Gaps = 38/221 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A H GH+ + +M YI+G R I DL Q+ L AL V +A + G
Sbjct: 8 MRTLLEAGAHFGHQTHRWNPKMDRYIFGSRSNIHIIDLSQTMPLFHQALVAVRDVAAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-VILTNT- 186
VLFVG Q S + + A+ C ++ W G TN + ++ RL +L IL N
Sbjct: 68 RVLFVGTKRQASEPVAEAAKRCAQYYMNNRWLGGTLTNWRTVSGSIARLRELEGILENGG 127
Query: 187 ---------------------------------LTTVLEPNP---AIGEAAKMCIPTVGI 210
+ V++ N AI EA K+ IP + I
Sbjct: 128 EGRVKKELLNLQREKDKLELSLGGIKDMGSIPDIMFVIDTNKEAIAIQEARKLNIPIIAI 187
Query: 211 VDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+D+N +P+ ITYPVPGNDD AIQ YC + A+L G A
Sbjct: 188 LDTNSDPDGITYPVPGNDDAARAIQTYCDLIADAVLDGLAA 228
>gi|332850397|ref|ZP_08432717.1| ribosomal protein S2 [Acinetobacter baumannii 6013150]
gi|332871836|ref|ZP_08440259.1| ribosomal protein S2 [Acinetobacter baumannii 6013113]
gi|332875272|ref|ZP_08443104.1| ribosomal protein S2 [Acinetobacter baumannii 6014059]
gi|384143964|ref|YP_005526674.1| 30S ribosomal protein S2 [Acinetobacter baumannii MDR-ZJ06]
gi|332730668|gb|EGJ61979.1| ribosomal protein S2 [Acinetobacter baumannii 6013150]
gi|332731165|gb|EGJ62465.1| ribosomal protein S2 [Acinetobacter baumannii 6013113]
gi|332736529|gb|EGJ67524.1| ribosomal protein S2 [Acinetobacter baumannii 6014059]
gi|347594457|gb|AEP07178.1| ribosomal protein S2 [Acinetobacter baumannii MDR-ZJ06]
Length = 267
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 108/245 (44%), Gaps = 48/245 (19%)
Query: 52 PNPLRYHDYFQVRNL----VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLD 107
PNP F+V+ + V ++D+ A H GH+ + +M+ YI+G R I +L+
Sbjct: 9 PNPT-----FKVKKMADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLE 63
Query: 108 QSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS 167
+ L DALNF +A + VLFVG S +I + AQ + W GM TN
Sbjct: 64 HTVPALNDALNFANQLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNW 123
Query: 168 EKLFRAVTRLPDLVILTN-------TLTTVLE---------------------PNP---- 195
+ L +++ RL DL + T LE P+
Sbjct: 124 KTLRQSINRLKDLQTQSQDGTFAKLTKREALERTREMEKLERSLGGVKNMGGLPDALFVI 183
Query: 196 -------AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
AI EA + IP +GIVD+N NP+ + Y +PGNDD A+ Y AIL G
Sbjct: 184 DVDHEAIAIKEAKNLGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAG 243
Query: 249 KKAKQ 253
K+ Q
Sbjct: 244 KEYAQ 248
>gi|270307750|ref|YP_003329808.1| 30S ribosomal protein S2 [Dehalococcoides sp. VS]
gi|270153642|gb|ACZ61480.1| ribosomal protein S2 [Dehalococcoides sp. VS]
Length = 245
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 47/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K++ +A H GH+ RMK YI+ R G I DL+++ +L A N++ + G
Sbjct: 6 IKELLEAGAHFGHQTSRWHPRMKKYIFTKRNGIHIIDLEKTVVMLDKACNYINQVVSDGG 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q ++ + A+ C + + W G+ TN
Sbjct: 66 KVLFVGTKKQAQEILAEEAKRCGMYFINQRWTGGILTNFHSIQSRIDYLVRLEDQQARGD 125
Query: 167 --------SEKL-------------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
++KL F+ +TRLPD++ + + + A+ EA +M +
Sbjct: 126 FNRLPKKEAQKLAEEIARLNRTMGGFKEMTRLPDVIFVVDPTKEKI----AMAEAKRMGV 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
P V +VD+NCNP+ + YP+P NDD AI+ C ++++ + A
Sbjct: 182 PLVAMVDTNCNPDEVDYPIPSNDDAMRAIKLICSKMADSVIEAQNA 227
>gi|85859430|ref|YP_461632.1| 30S ribosomal protein S2 [Syntrophus aciditrophicus SB]
gi|123725263|sp|Q2LTQ7.1|RS2_SYNAS RecName: Full=30S ribosomal protein S2
gi|85722521|gb|ABC77464.1| ribosomal protein S2 [Syntrophus aciditrophicus SB]
Length = 277
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 41/237 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +MKPYI+G R I DL Q+ L ++A NFV
Sbjct: 3 IISMKQLLEAGVHFGHQTNKWNPKMKPYIFGARNNIYIIDLQQTVGLFQNAYNFVIDTVS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
G ++F+G Q+ I A C + W GM TN
Sbjct: 63 EGGEIMFIGTKKQSQDSIHDEATRCGMPYVNQRWLGGMLTNFVTIKKRIDRLNYLDQIFE 122
Query: 167 ------------------SEKLFRAVTRLPDLVILTNTLTTVLEPNP---AIGEAAKMCI 205
EKL + + + + L L +++P A+ EA K+ I
Sbjct: 123 DDSVRAFPKKEIMGLQKEREKLVKVLGGIQKMKSLPAAL-FIVDPKRETIAVNEAKKLRI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
P + IVD+NC+P I Y +PGNDD AI+ + F A+ +GK+ ++ L+ ++K
Sbjct: 182 PIIAIVDTNCDPENIDYIIPGNDDAIRAIKLFSSKFADAVTEGKRRYEERLQAETDK 238
>gi|127513563|ref|YP_001094760.1| 30S ribosomal protein S2 [Shewanella loihica PV-4]
gi|166226753|sp|A3QGA3.1|RS2_SHELP RecName: Full=30S ribosomal protein S2
gi|126638858|gb|ABO24501.1| SSU ribosomal protein S2P [Shewanella loihica PV-4]
Length = 242
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 45/233 (19%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R G I +L+ + + +AL F++++A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG S I++ A C ++ W GM TN + + +++ RL DL
Sbjct: 64 KGKVLFVGTKRAASEAIKEAAISCDQYYVDNRWLGGMLTNWKTVRQSIKRLKDLESQSVD 123
Query: 181 -----------VILTNTLTTVLEP----------------------NPAIGEAAKMCIPT 207
++ T L + + + AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVIFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK------KAKQD 254
V +VD+N +P+ I Y VPGNDD AI+ Y + A G+ +A+QD
Sbjct: 184 VAVVDTNSSPDGINYIVPGNDDAMRAIRLYAESVAAAAKAGRGQDLAVQAEQD 236
>gi|114569930|ref|YP_756610.1| 30S ribosomal protein S2 [Maricaulis maris MCS10]
gi|122316103|sp|Q0APW5.1|RS2_MARMM RecName: Full=30S ribosomal protein S2
gi|114340392|gb|ABI65672.1| SSU ribosomal protein S2P [Maricaulis maris MCS10]
Length = 288
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 102/225 (45%), Gaps = 40/225 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A H GH+ + +MK +I+G R I DL Q+ LL AL V A + G
Sbjct: 8 MRQLLEAGCHFGHQTHRWNPKMKDFIFGERSNIHIIDLSQTVPLLHQALVKVRETAAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-------- 180
VLFVG Q + + A C ++ + W G TN + ++ RL +L
Sbjct: 68 RVLFVGTKRQAQDPLAQAAGRCAQYYMNQRWLGGTLTNWRTISNSIARLRELEGMFENEG 127
Query: 181 ----------VILTNT-------------------LTTVLEPNP---AIGEAAKMCIPTV 208
++LT L V++ N AI EA K+ IP +
Sbjct: 128 GMAGLTKKEQLMLTREREKLDRSLGGIKDMGGTPDLMFVIDTNKEGIAIQEAKKLGIPVI 187
Query: 209 GIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+VD+NC+P+L+ +P+PGNDD AI YC + A+L G Q
Sbjct: 188 AVVDTNCDPDLVDFPIPGNDDASRAISLYCDLIADAVLDGMGDSQ 232
>gi|428769483|ref|YP_007161273.1| 30S ribosomal protein S2 [Cyanobacterium aponinum PCC 10605]
gi|428683762|gb|AFZ53229.1| SSU ribosomal protein S2P [Cyanobacterium aponinum PCC 10605]
Length = 272
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 106/243 (43%), Gaps = 47/243 (19%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K++ D+ VH GH+ + +M PYIY R G I DL Q+A+LL +A ++ A
Sbjct: 2 SVVSLKELLDSGVHFGHQTRRWNPKMSPYIYTARNGVHIIDLVQTAQLLEEAYAYLKKAA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL------- 177
VLFVG Q + +I + A C F + W GM TN E + V RL
Sbjct: 62 ENGKKVLFVGTKRQAAGIIAQEAARCGAFYINQRWLGGMLTNWETIKSRVGRLKELEELE 121
Query: 178 ------------------------------------PDLVILTNTLTTVLEPNPAIGEAA 201
PD+V++ + + + A+ E
Sbjct: 122 ESGAINLRPKKEASVLRRELTKLQRYLGGIKDMRRVPDIVVIID----IRREHNAVKECE 177
Query: 202 KMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSE 261
K+ + + ++D+NCNP L+ YP+P NDD +I+ AI +G+ K L E
Sbjct: 178 KLGLSVISMLDTNCNPELVDYPIPANDDAIRSIKLIIGKLADAIYEGRYGKAAAEGKLDE 237
Query: 262 KQE 264
E
Sbjct: 238 FME 240
>gi|254368535|ref|ZP_04984551.1| hypothetical protein FTAG_01515 [Francisella tularensis subsp.
holarctica FSC022]
gi|157121438|gb|EDO65629.1| hypothetical protein FTAG_01515 [Francisella tularensis subsp.
holarctica FSC022]
Length = 239
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 101/217 (46%), Gaps = 39/217 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K+M A VH GHK + +MK YI+G+ G I +L+++ L +DA+NFV G
Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-------- 180
+LFVG Q ++E A+ C + W GM TN + + +++ RL L
Sbjct: 64 KILFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123
Query: 181 -------VILTNTLT---------------------TVLEPNP---AIGEAAKMCIPTVG 209
+L N T V++ N AI EA K+ I V
Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDGNKEHIAIQEAQKLGIKVVA 183
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAIL 246
IVD+N NP I Y +PGNDD +I +Y + F A++
Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVI 220
>gi|114777900|ref|ZP_01452814.1| ribosomal protein S2 [Mariprofundus ferrooxydans PV-1]
gi|114551687|gb|EAU54239.1| ribosomal protein S2 [Mariprofundus ferrooxydans PV-1]
Length = 252
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K + +A VH GH+ + +M PYI+G R G I DL ++ + +A F+ +A G
Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAPYIFGKRNGIHIIDLQKTLRMANEAYTFMQELATAGG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS--------------------- 167
VLFVG Q I++ A +F W G TN
Sbjct: 61 RVLFVGTKRQARDAIKEEACRAGQFYINHRWLGGTLTNFATVQQSVRKMKDLQRQKEEGV 120
Query: 168 ----------------EKLFRAVTRLPDLVILTNTL--TTVLEPNPAIGEAAKMCIPTVG 209
EKL R++ + ++V L + L V + AI EA K+ IP V
Sbjct: 121 FELLTKKEALQMQRELEKLERSLGGIKEMVNLPDCLFVVDVRKEELAIKEAQKLGIPVVA 180
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+VDSNCNP I Y +PGNDD A++ +C A+++G +A
Sbjct: 181 VVDSNCNPTGIDYIIPGNDDAIRAVRLFCSKIADALMEGAEA 222
>gi|293609659|ref|ZP_06691961.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828111|gb|EFF86474.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 267
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 108/245 (44%), Gaps = 48/245 (19%)
Query: 52 PNPLRYHDYFQVRNL----VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLD 107
PNP F+V+ + V ++D+ A H GH+ + +M+ YI+G R I +L+
Sbjct: 9 PNPT-----FKVKKMADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLE 63
Query: 108 QSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS 167
+ L DALNF +A + VLFVG S +I + AQ + W GM TN
Sbjct: 64 HTVPALNDALNFANQLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNW 123
Query: 168 EKLFRAVTRLPDLVILTN-------TLTTVLE---------------------PNP---- 195
+ L +++ RL DL + T LE P+
Sbjct: 124 KTLRQSINRLKDLQTQSQDGTFAKLTKREALERAREMEKLERSLGGVKNMGGLPDALFVI 183
Query: 196 -------AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
AI EA + IP +GIVD+N NP+ + Y +PGNDD A+ Y AIL G
Sbjct: 184 DVDHEAIAIKEAKNLGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAG 243
Query: 249 KKAKQ 253
K+ Q
Sbjct: 244 KEYAQ 248
>gi|134299825|ref|YP_001113321.1| 30S ribosomal protein S2 [Desulfotomaculum reducens MI-1]
gi|172044310|sp|A4J5Z3.1|RS2_DESRM RecName: Full=30S ribosomal protein S2
gi|134052525|gb|ABO50496.1| SSU ribosomal protein S2P [Desulfotomaculum reducens MI-1]
Length = 232
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 39/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M PYI+ R G I DL ++ + + + +FV +A
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTVKKVEECYDFVKQLAG 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G +LFVG Q +++ A+ C F + W GM TN + + + RL +L +
Sbjct: 63 EGGTLLFVGTKKQAQEAVKEEAERCGMFFVNQRWLGGMLTNFQTIRNRIDRLHELERMEE 122
Query: 186 TLT------------------------------------TVLEPNP---AIGEAAKMCIP 206
T V++P A+ EA K+ IP
Sbjct: 123 DGTFEVLPKKEVAQLLHEKEKLDKFLGGIKNMRRLPGALFVIDPRKERIAVAEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V IVD+NC+P+ I Y +PGNDD A++ AIL+GK+ +Q
Sbjct: 183 IVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGKIADAILEGKQGEQ 229
>gi|113461231|ref|YP_719300.1| 30S ribosomal protein S2 [Haemophilus somnus 129PT]
gi|170717230|ref|YP_001784349.1| 30S ribosomal protein S2 [Haemophilus somnus 2336]
gi|122945346|sp|Q0I458.1|RS2_HAES1 RecName: Full=30S ribosomal protein S2
gi|189044941|sp|B0UTA0.1|RS2_HAES2 RecName: Full=30S ribosomal protein S2
gi|112823274|gb|ABI25363.1| SSU ribosomal protein S2P [Haemophilus somnus 129PT]
gi|168825359|gb|ACA30730.1| ribosomal protein S2 [Haemophilus somnus 2336]
Length = 239
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R G I +L+++ + +AL + IA
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGPRNGVHIINLEKTVPMFNEALVELTRIASN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
+G +LFVG S +++ A DCQ++ W GM TN + + +++ RL DL
Sbjct: 64 NGRILFVGTKRAASEVVKAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 183 -----LTNTLTTV-------LE------------PNP-----------AIGEAAKMCIPT 207
LT V LE P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALVRTREMEKLELSLGGIKDMGGLPDAIFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD AIQ Y TA+ +G+
Sbjct: 184 FAIVDTNSSPDGVDFVIPGNDDASRAIQLYLSAATTAVKEGR 225
>gi|374583999|ref|ZP_09657091.1| SSU ribosomal protein S2P [Leptonema illini DSM 21528]
gi|373872860|gb|EHQ04854.1| SSU ribosomal protein S2P [Leptonema illini DSM 21528]
Length = 293
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 100/226 (44%), Gaps = 41/226 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K + +A VH GH+ D RM PYI+ R G I DL ++ ++ + A + +R
Sbjct: 4 ISMKTLLEAGVHFGHQTRKWDPRMAPYIFTARNGIHIIDLQKTVQMAKKAYEALREHTHR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
VLFVG Q +E+ A+ C+ F W G+ TN + +++ RL L + T
Sbjct: 64 GEKVLFVGTKKQARSAVEREAKRCKMFYINTRWPGGLLTNWNTVRKSIARLKKLEAMEET 123
Query: 187 LT--------------------------------------TVLEPNP---AIGEAAKMCI 205
T +++P+ A+ EA K+ I
Sbjct: 124 GTFDQEARTKKEILMLQRELDKLRKDLAGIKDMNNLPENIFIIDPDRERIAVQEAQKLGI 183
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+VDSNCNP I +P+PGNDD AI + Q AI++G +
Sbjct: 184 RIFAVVDSNCNPEPIDFPIPGNDDAIRAISLFLQTMADAIIEGTEG 229
>gi|156252211|gb|ABU60717.1| ribosomal protein S2 [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 236
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 101/217 (46%), Gaps = 39/217 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K+M A VH GHK + +MK YI+G+ G I +L+++ L +DA+NFV G
Sbjct: 1 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-------- 180
+LFVG Q ++E A+ C + W GM TN + + +++ RL L
Sbjct: 61 KILFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 120
Query: 181 -------VILTNTLT---------------------TVLEPNP---AIGEAAKMCIPTVG 209
+L N T V++ N AI EA K+ I V
Sbjct: 121 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDGNKEHIAIQEAQKLGIKVVA 180
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAIL 246
IVD+N NP I Y +PGNDD +I +Y + F A++
Sbjct: 181 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVI 217
>gi|85712038|ref|ZP_01043092.1| 30S ribosomal protein S2 [Idiomarina baltica OS145]
gi|85694224|gb|EAQ32168.1| 30S ribosomal protein S2 [Idiomarina baltica OS145]
Length = 242
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 106/224 (47%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + DAL+++ H+A
Sbjct: 4 VSMRDMLKAGVHFGHQTRFWNPKMKPFIFGARNKIHIINLEKTVPMFNDALSYMQHVASN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG + +++ A +C ++ W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAAAEPVKEAALNCGQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETMSQD 123
Query: 183 -----------LTNT------------------LTTVL------EPNPAIGEAAKMCIPT 207
L NT L VL + AI EA + IP
Sbjct: 124 GTFDKLTKKEALVNTREMEKLEKGLGGIKNMGGLPDVLFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V +VD+N +P+ + Y +PGNDD A+Q Y AI + K A
Sbjct: 184 VSVVDTNSDPDGVDYVIPGNDDAIRAVQLYLNAAADAIKEAKSA 227
>gi|427439033|ref|ZP_18923775.1| 30S ribosomal protein S2 [Pediococcus lolii NGRI 0510Q]
gi|425788411|dbj|GAC44563.1| 30S ribosomal protein S2 [Pediococcus lolii NGRI 0510Q]
Length = 256
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 39/225 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K + +A VH GH+ + +MKP+I+ R G I DL ++ +L+ +A NFV +A DG
Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMKPFIFTERNGIYIIDLQKTVKLIDNAYNFVKDVAANDG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-------- 180
+VLFVG Q IE+ A+ +F W G TN + + + RL DL
Sbjct: 61 VVLFVGTKKQAQTAIEEEAKRAGQFYVNHRWLGGTLTNWNTIQKRIKRLKDLKKMEEDGT 120
Query: 181 --------VILTNTLTTVLEP------------------NP-----AIGEAAKMCIPTVG 209
V L N LE +P AI EA K+ IP V
Sbjct: 121 FDRLPKKEVALLNKQKDKLEKFLGGIEDMPHIPDVLFVVDPRKEQIAIKEAQKLNIPVVA 180
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
+VD+N +P+ + +P NDD A++ A+++G++ + D
Sbjct: 181 MVDTNTDPDQVDVIIPSNDDAIRAVRLITSKMADAVVEGRQGEDD 225
>gi|381198101|ref|ZP_09905440.1| 30S ribosomal protein S2 [Acinetobacter lwoffii WJ10621]
Length = 249
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 106/239 (44%), Gaps = 39/239 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++D+ A H GH+ + +M+ YI+G R I +L+ + L DALNFV +A +
Sbjct: 6 VSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFVNSLASK 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
VLFVG S +I + AQ + W GM TN + L +++ RL DL +
Sbjct: 66 KNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQD 125
Query: 186 ------TLTTVLE---------------------PNP-----------AIGEAAKMCIPT 207
T LE P+ AI EA + IP
Sbjct: 126 GTFAKLTKREALERTREMEKLERALGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPV 185
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEVQ 266
+GIVD+N NP+ + Y +PGNDD A+ Y AIL GK+ Q ++ +E +
Sbjct: 186 IGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKVEEAK 244
>gi|238754807|ref|ZP_04616158.1| 30S ribosomal protein S2 [Yersinia ruckeri ATCC 29473]
gi|238706967|gb|EEP99333.1| 30S ribosomal protein S2 [Yersinia ruckeri ATCC 29473]
Length = 241
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + AL + I+ R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNQALAELTKISSR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S ++++A +C +F W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASEAVKESANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD AI+ Y TA+ +G+
Sbjct: 184 FSIVDTNSDPDGVDFIIPGNDDAIRAIKLYLGAVATAVREGR 225
>gi|89255658|ref|YP_513019.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
LVS]
gi|115314159|ref|YP_762882.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
OSU18]
gi|254367049|ref|ZP_04983085.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
257]
gi|290953223|ref|ZP_06557844.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
URFT1]
gi|394894374|ref|YP_001427673.2| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|422938154|ref|YP_007011301.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
FSC200]
gi|423049968|ref|YP_007008402.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
F92]
gi|122325797|sp|Q0BNT9.1|RS2_FRATO RecName: Full=30S ribosomal protein S2
gi|122999778|sp|Q2A5I2.1|RS2_FRATH RecName: Full=30S ribosomal protein S2
gi|209573719|sp|A7N9R4.2|RS2_FRATF RecName: Full=30S ribosomal protein S2
gi|89143489|emb|CAJ78665.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
LVS]
gi|115129058|gb|ABI82245.1| ribosomal protein S2 [Francisella tularensis subsp. holarctica
OSU18]
gi|134252875|gb|EBA51969.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
257]
gi|407293305|gb|AFT92211.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
FSC200]
gi|421950690|gb|AFX69939.1| 30S ribosomal protein S2 [Francisella tularensis subsp. holarctica
F92]
Length = 239
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 101/217 (46%), Gaps = 39/217 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K+M A VH GHK + +MK YI+G+ G I +L+++ L +DA+NFV G
Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-------- 180
+LFVG Q ++E A+ C + W GM TN + + +++ RL L
Sbjct: 64 KILFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123
Query: 181 -------VILTNTLT---------------------TVLEPNP---AIGEAAKMCIPTVG 209
+L N T V++ N AI EA K+ I V
Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDGNKEHIAIQEAQKLGIKVVA 183
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAIL 246
IVD+N NP I Y +PGNDD +I +Y + F A++
Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVI 220
>gi|90419592|ref|ZP_01227502.1| 30S ribosomal protein S2 [Aurantimonas manganoxydans SI85-9A1]
gi|90336529|gb|EAS50270.1| 30S ribosomal protein S2 [Aurantimonas manganoxydans SI85-9A1]
Length = 284
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 98/227 (43%), Gaps = 46/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M YI+G R I DL Q+ LL AL V+ R G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMSSYIFGARNNIHILDLGQTVPLLHRALQAVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S ++ A ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQASDIVADAANRSAQYYVNARWLGGMLTNWKTISNSIQRLRKLDEMLAGEA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PD++ + +T + AI EA ++ IP
Sbjct: 128 QGFTKKERLTLQRERDKLDRALGGIKDMGGVPDMIFIIDTNKESI----AIEEAKRLHIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V +VDSNC+P I YP+PGNDD AI YC + A + G +Q
Sbjct: 184 IVAVVDSNCDPAPIDYPIPGNDDAARAITLYCDLIARAAVDGIARQQ 230
>gi|39997019|ref|NP_952970.1| 30S ribosomal protein S2 [Geobacter sulfurreducens PCA]
gi|409912448|ref|YP_006890913.1| 30S ribosomal protein S2 [Geobacter sulfurreducens KN400]
gi|61215648|sp|Q74BW1.1|RS2_GEOSL RecName: Full=30S ribosomal protein S2
gi|39983907|gb|AAR35297.1| ribosomal protein S2 [Geobacter sulfurreducens PCA]
gi|298506036|gb|ADI84759.1| ribosomal protein S2 [Geobacter sulfurreducens KN400]
Length = 251
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 103/230 (44%), Gaps = 39/230 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K++ +A VH GH+ + +MKPYI+G R G I DL ++ L ++A NFV A
Sbjct: 4 ITMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKNAYNFVRENAQA 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
+LFVG Q I + A C + + W GM TN
Sbjct: 64 GETMLFVGTKKQAQDAIGEEAVRCGMYFVNQRWLGGMLTNFVTVKQSIDRLKRLDAMFAD 123
Query: 167 -----------------SEKLFRAVTRLPDLVILTNTLTTVLEPNP--AIGEAAKMCIPT 207
EKL + + + + L L + N AI EA K+ IP
Sbjct: 124 GSIEAYTKKEALQLEKEREKLEKILGGIKGMGKLPGALFVIDPKNETIAISEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLK 257
V +VD+NC+P+ I Y +PGNDD AI+ A+++G +A+ L+
Sbjct: 184 VAVVDTNCDPDPIDYVIPGNDDAIRAIRLLTSKMADAVIEGSQARDAVLQ 233
>gi|262375514|ref|ZP_06068747.1| ribosomal protein S2 [Acinetobacter lwoffii SH145]
gi|262309768|gb|EEY90898.1| ribosomal protein S2 [Acinetobacter lwoffii SH145]
gi|407006811|gb|EKE22632.1| hypothetical protein ACD_6C00770G0006 [uncultured bacterium]
Length = 248
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 105/238 (44%), Gaps = 39/238 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++D+ A H GH+ + +M+ YI+G R I +L+ + L DALNF ++A +
Sbjct: 6 VSMRDLLQAGAHFGHQTRFWNPKMRDYIFGARNKIHIINLEHTVPALNDALNFANNLASK 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
VLFVG S +I + AQ + W GM TN + L +++ RL DL +
Sbjct: 66 KNKVLFVGTKRAASAIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQD 125
Query: 186 ------TLTTVLE---------------------PNP-----------AIGEAAKMCIPT 207
T LE P+ AI EA + IP
Sbjct: 126 GTFAKLTKREALERTREMEKLERGLGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPV 185
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEV 265
+GIVD+N NP+ + Y +PGNDD A+ Y AIL GK+ Q ++ +E
Sbjct: 186 IGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKAEEA 243
>gi|237750359|ref|ZP_04580839.1| ribosomal protein S2 [Helicobacter bilis ATCC 43879]
gi|229373889|gb|EEO24280.1| ribosomal protein S2 [Helicobacter bilis ATCC 43879]
Length = 268
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 47/228 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +KD+ + VH GH+ + +MK +I+GVR+ I DL ++ R N V A
Sbjct: 1 MVTMKDLLECGVHFGHQTRRWNPKMKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDAAS 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+++FVG Q S + + A+ W GM TN
Sbjct: 61 EGKVIMFVGTKKQASDTLREYAEKVNAPYVNYRWLGGMLTNFSTIKKSVRKLEIIEEMES 120
Query: 167 ---------SEKLF---------------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + + PD++ + + L + A+GEA K
Sbjct: 121 SGQIDLLTKKEKLMLMRKKEKLNKYLGGIRHLKKAPDMLFVVDALKEKI----AVGEARK 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
+ IP V +D+NC+P+LI YP+PGNDD +IQ +C+ AI +G++
Sbjct: 177 LGIPVVAPLDTNCDPDLIDYPIPGNDDAIRSIQLFCKEISDAITEGRE 224
>gi|389721537|ref|ZP_10188289.1| 30S ribosomal protein S2 [Acinetobacter sp. HA]
gi|388608833|gb|EIM38029.1| 30S ribosomal protein S2 [Acinetobacter sp. HA]
Length = 248
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 104/238 (43%), Gaps = 39/238 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++D+ A H GH+ + +M+ YI+G R I +L+ + L DALNF +A +
Sbjct: 6 VSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFANQLASK 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
VLFVG S +I + AQ + W GM TN + L +++ RL DL +
Sbjct: 66 KNKVLFVGTKRAASAIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQD 125
Query: 186 ------TLTTVLE---------------------PNP-----------AIGEAAKMCIPT 207
T LE P+ AI EA + IP
Sbjct: 126 GTFAKLTKREALERTREMEKLERGLGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPV 185
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEV 265
+GIVD+N NP+ + Y +PGNDD A+ Y AIL GK+ Q ++ +E
Sbjct: 186 IGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKAEEA 243
>gi|393774547|ref|ZP_10362909.1| 30S ribosomal protein S2 [Novosphingobium sp. Rr 2-17]
gi|392720030|gb|EIZ77533.1| 30S ribosomal protein S2 [Novosphingobium sp. Rr 2-17]
Length = 255
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V + + +A H GH+ + RMKPYI+G R G I DL Q+ L AL FV
Sbjct: 5 VVTMTQLIEAGAHFGHQTHRWNPRMKPYIFGARNGIHIIDLSQTVPLFARALEFVQSTVQ 64
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDC-QEFAHTRFWRQGMFTN------SEKLFRA----- 173
G VLFVG Q I + A+ C Q F + R W GM TN S K F+A
Sbjct: 65 AGGKVLFVGTKRQAQEPIAQAARACGQHFVNHR-WLGGMLTNWKTISGSIKRFKALEEQL 123
Query: 174 --------------VTR-----------------LPDLVILTNTLTTVLEPNPAIGEAAK 202
+TR +PD++ + + L AI EA
Sbjct: 124 AGDTAGLTKKEVLQLTRERDKLELSLGGIRDMGGIPDVMFVIDANKEEL----AIKEANV 179
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
+ IP V ++D+N NP I++P+PGNDD A++ YC A KG +
Sbjct: 180 LGIPVVAVLDTNVNPQGISFPIPGNDDASRAVRLYCDAIAKAATKGGR 227
>gi|383787479|ref|YP_005472048.1| 30S ribosomal protein S2 [Fervidobacterium pennivorans DSM 9078]
gi|383110326|gb|AFG35929.1| ribosomal protein S2 [Fervidobacterium pennivorans DSM 9078]
Length = 258
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 47/229 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +MKPYIYG R+G I DL ++ +LL +A +FV +A
Sbjct: 3 VVTMKQLLEAGVHFGHRTQRWNPKMKPYIYGARKGIYIIDLQKTVKLLDEAYDFVRDVAS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS------------------ 167
+ G +LFVG Q +++ A+ C F W G+ TN
Sbjct: 63 KGGTILFVGTKKQAQQVVKNEAERCGGFYVNNRWLGGLLTNFSTIQTRIQKLIELEEMEA 122
Query: 168 -------------------EKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL + + LPD++ + + + A+ EA
Sbjct: 123 NGELDKLPKKEQSKLRKKLEKLRKNLGGVKNMKSLPDVIFIVDPRKEKI----AVEEANH 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+ IP V +VD+NC+P+ I Y +P NDD AI A L+G++
Sbjct: 179 LKIPIVAMVDTNCDPDPIDYVIPSNDDAIRAIALIAGKIADAYLEGREG 227
>gi|154500331|ref|ZP_02038369.1| hypothetical protein BACCAP_03998 [Bacteroides capillosus ATCC
29799]
gi|150270836|gb|EDM98119.1| ribosomal protein S2 [Pseudoflavonifractor capillosus ATCC 29799]
Length = 241
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 101/226 (44%), Gaps = 39/226 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M YIY R G I DL ++ + L +A NFV +A
Sbjct: 3 VVSMKQLLEAGVHFGHQTRRWNPKMAAYIYTERNGIYIIDLQKTVKKLEEAYNFVRELAQ 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR--------- 176
+LFVG Q I++ A C + W GM TN + + V R
Sbjct: 63 NGQTLLFVGTKKQAQEAIKEEAGRCGGYYVNARWLGGMLTNFKTMRGRVDRLNQLKKMQE 122
Query: 177 ---------------LPDLVILTNTLTTVLE---------------PNPAIGEAAKMCIP 206
L ++ L L V+E AI EA K+ IP
Sbjct: 123 DGTFDMLPKKEVMKHLGEIAKLEKYLGGVVEMKKLPGALFVVDPRKERNAINEARKLNIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V IVD+NC+P+ I Y +PGNDD AI+ V AI++GK+ +
Sbjct: 183 IVAIVDTNCDPDEIDYVIPGNDDAIRAIKLISSVMANAIMEGKQGQ 228
>gi|392595639|gb|EIW84962.1| ribosomal protein S2 [Coniophora puteana RWD-64-598 SS2]
Length = 301
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 90/184 (48%), Gaps = 10/184 (5%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+ A HLGH ++ PY YGVR I DLDQ+ LLR A + IA RDG ++
Sbjct: 99 LIAAGAHLGHSKSLMNPNFMPYAYGVRADITIIDLDQTLPLLRRAASLTRAIAARDGTIV 158
Query: 132 FVGQSAQNSLLIEKTAQDC--QEFAHTRFWRQGMFTNSEKLFRAVTR----LPDLVILTN 185
FVG + K A+ Q + W G TN +F A + +PDLVI N
Sbjct: 159 FVGTRKDLQPAVVKAAERIGPQAYNVGERWLPGTLTNRFTMFGAGIKDQRVIPDLVIFLN 218
Query: 186 TLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAI 245
L + AI E A +PT+GIVDSN +P ++ YP+P ND++ + + A
Sbjct: 219 PLANM----NAIRECAIQHVPTIGIVDSNVDPRIVMYPIPANDESTRTAELITGMLSIAG 274
Query: 246 LKGK 249
+GK
Sbjct: 275 KEGK 278
>gi|392402013|ref|YP_006438625.1| SSU ribosomal protein S2P [Turneriella parva DSM 21527]
gi|390609967|gb|AFM11119.1| SSU ribosomal protein S2P [Turneriella parva DSM 21527]
Length = 270
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 102/228 (44%), Gaps = 41/228 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K + +A VH GH+ + +MK YI+ R G I +L ++ L +DA + +A +
Sbjct: 4 ISMKSLLEAGVHFGHQTRRWNPKMKKYIFTARNGIHILNLQKTIVLAKDAYEAMRDLASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL--VILT 184
G VLFVG Q IEK A C +F W G+ TN + ++ RL L T
Sbjct: 64 GGKVLFVGTKKQAQADIEKAATRCGQFYINNRWLGGLLTNFRTVKLSIQRLRKLEEAFAT 123
Query: 185 NTLTTVLEPNP---------------------------------------AIGEAAKMCI 205
NT+ +++ A+ EA + I
Sbjct: 124 NTVHEIVKTKKEILQLDREIARLRKDLAGIRDMNELPDALFIVDPDREAIAVKEANTLGI 183
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P +VD+NCNP+LI YP+P NDD A+ + ++ A+ +GK+ +
Sbjct: 184 PIFAMVDTNCNPDLIQYPIPANDDAIRAVALFLEIMANAVEEGKEGGE 231
>gi|288818008|ref|YP_003432355.1| 30S ribosomal protein S2 [Hydrogenobacter thermophilus TK-6]
gi|384128771|ref|YP_005511384.1| 30S ribosomal protein S2 [Hydrogenobacter thermophilus TK-6]
gi|288787407|dbj|BAI69154.1| ribosomal protein S2 [Hydrogenobacter thermophilus TK-6]
gi|308751608|gb|ADO45091.1| ribosomal protein S2 [Hydrogenobacter thermophilus TK-6]
Length = 276
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 47/231 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ ++D+ +A VH GH G + +M P++YGVR G I DL+++ L A NFVA
Sbjct: 3 VISMRDLLEAGVHFGHSKGRWNPKMAPFLYGVRNGIHIIDLNKTVVYLEQAYNFVADRIA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------S 167
+LFVG Q +I++ A+ W G+ TN +
Sbjct: 63 EGAEILFVGTKKQAKDVIKEEAERAGVPYINERWVGGLLTNFRTVKKSMLKLKTLERMEA 122
Query: 168 EKLFRA-------------------------VTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
E +F + R+PD+V + +T+ + A+ EA K
Sbjct: 123 EGVFEVLPKKEVRMMRRKMEHLRKLYAGILNLERVPDMVWIVDTVR----EHIAVQEARK 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+ + V I DSNC+P++I YPVPGNDD +I+ A+++GK+ ++
Sbjct: 179 LGVTIVAIADSNCDPDVIDYPVPGNDDAIKSIKLLTAKIADAVIEGKQRRE 229
>gi|68171644|ref|ZP_00545009.1| Ribosomal protein S2, bacterial and organelle form [Ehrlichia
chaffeensis str. Sapulpa]
gi|88657981|ref|YP_507329.1| 30S ribosomal protein S2 [Ehrlichia chaffeensis str. Arkansas]
gi|123750068|sp|Q2GGV4.1|RS2_EHRCR RecName: Full=30S ribosomal protein S2
gi|67998937|gb|EAM85623.1| Ribosomal protein S2, bacterial and organelle form [Ehrlichia
chaffeensis str. Sapulpa]
gi|88599438|gb|ABD44907.1| ribosomal protein S2 [Ehrlichia chaffeensis str. Arkansas]
Length = 288
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 38/221 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++D+ ++ VH GHK + +M PYIYGV I +L + LL++AL + I + G
Sbjct: 9 MRDLVESGVHFGHKASRWNPKMAPYIYGVHNDIHIINLQNTVVLLKNALKALYDIVLKRG 68
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLT 188
VLF+G Q S +I A C ++ W GM TN E + ++ +L + L +
Sbjct: 69 RVLFIGTKVQASAIIADEAVRCGQYYINNRWLGGMLTNWETISLSIKKLKEYEKLIENVD 128
Query: 189 T-----------------------------------VLEPNP---AIGEAAKMCIPTVGI 210
V++ N AI EA K+ IP + +
Sbjct: 129 NQFTKKELLLFEKKRAKLDRSIGGICNMGGLPHALFVIDTNKEHIAIKEANKLNIPVIAV 188
Query: 211 VDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+D+N +P I YP+PGNDD +I ++C++ IL+ ++
Sbjct: 189 LDTNSDPAGIDYPIPGNDDAVRSIDFFCKIVSDTILEAIRS 229
>gi|89054797|ref|YP_510248.1| 30S ribosomal protein S2 [Jannaschia sp. CCS1]
gi|123286546|sp|Q28PY9.1|RS2_JANSC RecName: Full=30S ribosomal protein S2
gi|88864346|gb|ABD55223.1| SSU ribosomal protein S2P [Jannaschia sp. CCS1]
Length = 276
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 47/230 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM +IYG R G I DL Q+ +L AL V + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMGEFIYGDRNGIHILDLTQTHPMLEQALQVVRETVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
+LFVG Q + A+ C ++ W G TN + + +++RL
Sbjct: 68 RILFVGTKRQAQKPVADAAERCAQYYMNHRWLGGTLTNWKTVSNSISRLKEIDEKTADGS 127
Query: 178 --------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCI 205
PDL+ + + V + + AI EA K+ I
Sbjct: 128 LEGLTKKERLGMERDQIKLQASLGGIREMGGLPDLIFVID----VNKEDLAIAEAKKLGI 183
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
P V +VD+NC+P+ + Y +PGNDD AI YC + A L G + +T
Sbjct: 184 PVVAVVDTNCSPDGVDYIIPGNDDAARAIALYCDLISRAALDGMSTQLET 233
>gi|86152737|ref|ZP_01070942.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni HB93-13]
gi|85843622|gb|EAQ60832.1| ribosomal protein S2 [Campylobacter jejuni subsp. jejuni HB93-13]
Length = 263
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 112/240 (46%), Gaps = 40/240 (16%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G + DL ++ R N V A
Sbjct: 1 MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLP------- 178
+LFVG Q I++ A+ C W GM TN + +++ +L
Sbjct: 61 EGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEE 120
Query: 179 ----------DLVILTNTLTTVL----------------------EPNPAIGEAAKMCIP 206
+ ++LT +L + A+ EA ++ IP
Sbjct: 121 DGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQHDMIFVIDTVKEKIAVQEANRLRIP 180
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK-QDTLKLLSEKQEV 265
V +D+NC+P+L+TYP+PGNDD ++Q +CQ AI +GK + QD L +E++E+
Sbjct: 181 VVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALREQDGEALANEEKEI 240
>gi|54113283|gb|AAV29275.1| NT02FT0086 [synthetic construct]
Length = 239
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 39/217 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K+M VH GHK + +MK YI+G+ G I +L+++ L +DA+NFV G
Sbjct: 4 MKEMLSVGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-------- 180
+LFVG Q ++E A+ C + W GM TN + + +++ RL L
Sbjct: 64 KILFVGTKRQAQDIVEAEAKRCGMSFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123
Query: 181 -------VILTNTLT---------------------TVLEPNP---AIGEAAKMCIPTVG 209
+L N T V++ N AI EA K+ I V
Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVA 183
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAIL 246
IVD+N NP I Y +PGNDD +I +Y + F A++
Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVI 220
>gi|399057816|ref|ZP_10744245.1| ribosomal protein S2 [Novosphingobium sp. AP12]
gi|398041564|gb|EJL34620.1| ribosomal protein S2 [Novosphingobium sp. AP12]
Length = 250
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 103/224 (45%), Gaps = 40/224 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V + + +A H GH+ + RMKPYI+G R G I DL Q+ L AL+FV
Sbjct: 5 VVTMSQLIEAGAHFGHQTHRWNPRMKPYIFGARNGIHIIDLSQTVPLFARALDFVQSTVQ 64
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDC-QEFAHTRFWRQGMFTN------SEKLFRA----- 173
G VLFVG Q I + A+ C Q F + R W GM TN S K F+A
Sbjct: 65 AGGKVLFVGTKRQAQEPIAQAARACGQHFVNHR-WLGGMLTNWKTISGSIKRFKALEEQL 123
Query: 174 --------------VTRLPDLVILT----------NTLTTVLEPNP---AIGEAAKMCIP 206
+TR D + L+ + V++ N AI EA + IP
Sbjct: 124 AGDTAGLTKKEVLQLTRERDKLELSLGGIRDMGGIPDVMFVIDANKEELAIKEANVLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
V ++D+N NP I +P+PGNDD A++ YC A KG +
Sbjct: 184 VVAVLDTNVNPQGIAFPIPGNDDASRAVRLYCDAIAQAATKGHR 227
>gi|422015865|ref|ZP_16362458.1| 30S ribosomal protein S2 [Providencia burhodogranariea DSM 19968]
gi|414096579|gb|EKT58236.1| 30S ribosomal protein S2 [Providencia burhodogranariea DSM 19968]
Length = 241
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ L +AL + IA R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELTKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A C ++ W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ I + +PGNDD AI+ Y T + +G+
Sbjct: 184 FAIVDTNSDPDGIDFVIPGNDDAIRAIKLYLGAVATTVREGR 225
>gi|402758349|ref|ZP_10860605.1| 30S ribosomal protein S2 [Acinetobacter sp. NCTC 7422]
gi|406035717|ref|ZP_11043081.1| 30S ribosomal protein S2 [Acinetobacter parvus DSM 16617 = CIP
108168]
gi|425744852|ref|ZP_18862907.1| ribosomal protein S2 [Acinetobacter baumannii WC-323]
gi|425490448|gb|EKU56748.1| ribosomal protein S2 [Acinetobacter baumannii WC-323]
Length = 250
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++D+ A H GH+ + +M+ YI+G R I +L+ + L DALNFV ++A +
Sbjct: 6 VSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFVNNLASK 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
VLFVG S +I + AQ + W GM TN + L +++ RL DL +
Sbjct: 66 KNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQD 125
Query: 186 ------TLTTVLE---------------------PNP-----------AIGEAAKMCIPT 207
T LE P+ AI EA + IP
Sbjct: 126 GTFAKLTKREALERTREMEKLERALGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPV 185
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+GIVD+N NP+ + Y +PGNDD A+ Y AIL GK+ Q
Sbjct: 186 IGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQ 231
>gi|261491689|ref|ZP_05988270.1| 30S ribosomal protein S2 [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261494452|ref|ZP_05990938.1| 30S ribosomal protein S2 [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261309836|gb|EEY11053.1| 30S ribosomal protein S2 [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261312642|gb|EEY13764.1| 30S ribosomal protein S2 [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 239
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM +A VH GH+ + +MKP+I+G R G + +L+++ L +AL + IA
Sbjct: 4 VSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRIASN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
+G VLFVG S ++ A D Q+F W GM TN + + +++ RL DL T
Sbjct: 64 NGKVLFVGTKRAASEAVKLAAVDSQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQTQD 123
Query: 186 -----------------------TLTTVLEPNP---------------AIGEAAKMCIPT 207
+L + + N AI EA + IP
Sbjct: 124 GTFDKITKKEALMRTRELEKLELSLGGIKDMNGLPDAIFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N P+ + Y +PGNDD AIQ Y AI +G+
Sbjct: 184 FAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDSAVAAIKEGR 225
>gi|114332001|ref|YP_748223.1| 30S ribosomal protein S2 [Nitrosomonas eutropha C91]
gi|122313295|sp|Q0AEH4.1|RS2_NITEC RecName: Full=30S ribosomal protein S2
gi|114309015|gb|ABI60258.1| SSU ribosomal protein S2P [Nitrosomonas eutropha C91]
Length = 251
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 116/239 (48%), Gaps = 40/239 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+ + + RDAL++ +A
Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPYIFGQRNKIHIVNLEHTLVMFRDALDYARRLAAN 62
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL--VILT 184
+LFVG Q ++++ A C + W GM TN + + +++ RL D+ ++
Sbjct: 63 KETILFVGTKRQARDIVKEEAIRCGAPYVNQRWLGGMLTNFKTIRQSIKRLQDMEKMVQD 122
Query: 185 NTLTTVLEP------------NPAIG-------------------------EAAKMCIPT 207
TL +++ N ++G EA K+ IP
Sbjct: 123 GTLNKLVKKEALDFQRELEKLNASLGGIKEMKGLPDAMFVIDVGYQKGTIIEANKLGIPV 182
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK-KAKQDTLKLLSEKQEV 265
VG+VD+N NP I Y +PGNDD+ AI+ Y + AIL+G+ +A Q+ +++ EV
Sbjct: 183 VGVVDTNHNPAGIQYVIPGNDDSSQAIRLYARAMADAILEGRNQAIQEIVEIGKTDSEV 241
>gi|407800272|ref|ZP_11147134.1| 30S ribosomal protein S2 [Oceaniovalibus guishaninsula JLT2003]
gi|407057501|gb|EKE43475.1| 30S ribosomal protein S2 [Oceaniovalibus guishaninsula JLT2003]
Length = 291
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 100/229 (43%), Gaps = 46/229 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM YIYG R G I DL Q+ +L AL + ++G
Sbjct: 8 LRQLLEAGVHFGHQTQRWNPRMAEYIYGDRNGIHILDLTQTVPMLDKALQVIRDTVAKNG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
+LFVG Q I A+ C ++ W G TN + + +++ RL
Sbjct: 68 RILFVGTKRQAQKPIADAAERCAQYYMNHRWLGGTLTNWQTVSQSINRLKQIDERMAEGA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + V + + A+ EA K+ IP
Sbjct: 128 EGLTKRERLSMERDQAKLNASLGGIREMGGVPDLLFIID----VNKEDLAVLEAKKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V +VDSN +P+ I Y +PGNDD AI YC + A L G A+ D
Sbjct: 184 IVAVVDSNSSPDGIDYIIPGNDDAARAIALYCDLVSRAALDGMSAQMDA 232
>gi|354598882|ref|ZP_09016899.1| ribosomal protein S2 [Brenneria sp. EniD312]
gi|353676817|gb|EHD22850.1| ribosomal protein S2 [Brenneria sp. EniD312]
Length = 241
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A H GH+ + +MKP+I+G R I +L+++ L DAL ++ IA R
Sbjct: 4 VSMRDMLKAGAHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNDALAELSKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVKEAADSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A+ Y TA+ +G+
Sbjct: 184 FAIVDTNSDPDGVDFIIPGNDDAIRAVNLYLSAVATAVREGR 225
>gi|359427842|ref|ZP_09218886.1| 30S ribosomal protein S2 [Acinetobacter sp. NBRC 100985]
gi|358236733|dbj|GAB00425.1| 30S ribosomal protein S2 [Acinetobacter sp. NBRC 100985]
Length = 250
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++D+ A H GH+ + +M+ YI+G R I +L+ + L DALNFV ++A +
Sbjct: 6 VSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFVNNLASK 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
VLFVG S +I + AQ + W GM TN + L +++ RL DL +
Sbjct: 66 KNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQD 125
Query: 186 ------TLTTVLE---------------------PNP-----------AIGEAAKMCIPT 207
T LE P+ AI EA + IP
Sbjct: 126 GTFAKLTKREALERTREMDKLERALGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPV 185
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+GIVD+N NP+ + Y +PGNDD A+ Y AIL GK+ Q
Sbjct: 186 IGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQ 231
>gi|320352942|ref|YP_004194281.1| 30S ribosomal protein S2P [Desulfobulbus propionicus DSM 2032]
gi|320121444|gb|ADW16990.1| SSU ribosomal protein S2P [Desulfobulbus propionicus DSM 2032]
Length = 258
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 39/227 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A +H GH+ + +MKPYIYG R G I +LD + +L + A +
Sbjct: 4 VTMRQMLEAGLHFGHQTRRWNPKMKPYIYGPRNGIYIVNLDITMKLFKKAYGAMVEAVTN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
G VLFV Q +I++ A+ C + W GM TN + + +V RL
Sbjct: 64 GGSVLFVCTKRQGQAIIKEEAERCGMYYINHRWLGGMLTNFQTIKHSVDRLKKIESMQAD 123
Query: 178 ------PDLVIL------------------TNTLTTVL------EPNPAIGEAAKMCIPT 207
P +L TL VL + + A+GEA K+ IP
Sbjct: 124 GTINRFPKKEVLQMEKERVKLDRNIGGIKNMRTLPDVLFVIDPKKEDIAVGEAVKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
+ + D+NC+P+ I Y +PGNDD AI+ + AI++GK + +
Sbjct: 184 IALTDTNCDPDGINYVIPGNDDAIRAIKLISSMMAEAIMEGKSRRGE 230
>gi|304320075|ref|YP_003853718.1| 30S ribosomal protein S2 [Parvularcula bermudensis HTCC2503]
gi|303298978|gb|ADM08577.1| 30S ribosomal protein S2 [Parvularcula bermudensis HTCC2503]
Length = 306
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 98/225 (43%), Gaps = 46/225 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM+ YI+G R G I DL Q+ LL AL V I G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPRMREYIFGDRSGIHIIDLSQTVPLLHQALVKVRDIVAGGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR------------ 176
VLFVG Q + + A C ++ W G TN E + ++ R
Sbjct: 68 RVLFVGTKRQAQQPVAEAAGRCAQYYMNNRWLGGTLTNWETVSNSIQRMRVIEESLEAEA 127
Query: 177 ------------------------------LPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
LPDL+ + + V + + AI EA K+ IP
Sbjct: 128 RGFTKKEQLNMTRERDKLELSLGGIREMGGLPDLMFVID----VNKEDIAIKEAKKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V +VD+NC+P + Y +PGNDD AI YC + A++ G A
Sbjct: 184 VVAVVDTNCSPEGVDYIIPGNDDASRAISLYCNLVADAVIDGLSA 228
>gi|51597318|ref|YP_071509.1| 30S ribosomal protein S2 [Yersinia pseudotuberculosis IP 32953]
gi|108806515|ref|YP_650431.1| 30S ribosomal protein S2 [Yersinia pestis Antiqua]
gi|108813117|ref|YP_648884.1| 30S ribosomal protein S2 [Yersinia pestis Nepal516]
gi|145598951|ref|YP_001163027.1| 30S ribosomal protein S2 [Yersinia pestis Pestoides F]
gi|149366955|ref|ZP_01888988.1| 30S ribosomal protein S2 [Yersinia pestis CA88-4125]
gi|153947133|ref|YP_001399997.1| 30S ribosomal protein S2 [Yersinia pseudotuberculosis IP 31758]
gi|161484768|ref|NP_670436.2| 30S ribosomal protein S2 [Yersinia pestis KIM10+]
gi|161511344|ref|NP_994114.2| 30S ribosomal protein S2 [Yersinia pestis biovar Microtus str.
91001]
gi|162420294|ref|YP_001607772.1| 30S ribosomal protein S2 [Yersinia pestis Angola]
gi|165927142|ref|ZP_02222974.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|166011898|ref|ZP_02232796.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str. E1979001]
gi|166211704|ref|ZP_02237739.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167419541|ref|ZP_02311294.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425321|ref|ZP_02317074.1| ribosomal protein S2 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|170023315|ref|YP_001719820.1| 30S ribosomal protein S2 [Yersinia pseudotuberculosis YPIII]
gi|186896423|ref|YP_001873535.1| 30S ribosomal protein S2 [Yersinia pseudotuberculosis PB1/+]
gi|218928212|ref|YP_002346087.1| 30S ribosomal protein S2 [Yersinia pestis CO92]
gi|229837751|ref|ZP_04457911.1| 30S ribosomal subunit protein S2 [Yersinia pestis Pestoides A]
gi|229840973|ref|ZP_04461132.1| 30S ribosomal subunit protein S2 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229843074|ref|ZP_04463224.1| 30S ribosomal subunit protein S2 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229903559|ref|ZP_04518672.1| 30S ribosomal subunit protein S2 [Yersinia pestis Nepal516]
gi|384121501|ref|YP_005504121.1| 30S ribosomal protein S2 [Yersinia pestis D106004]
gi|384125675|ref|YP_005508289.1| 30S ribosomal protein S2 [Yersinia pestis D182038]
gi|384141089|ref|YP_005523791.1| 30S ribosomal protein S2 [Yersinia pestis A1122]
gi|384413674|ref|YP_005623036.1| 30S ribosomal protein S2 [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|420545664|ref|ZP_15043743.1| ribosomal protein S2 [Yersinia pestis PY-01]
gi|420550970|ref|ZP_15048491.1| ribosomal protein S2 [Yersinia pestis PY-02]
gi|420562067|ref|ZP_15058263.1| ribosomal protein S2 [Yersinia pestis PY-04]
gi|420567091|ref|ZP_15062802.1| ribosomal protein S2 [Yersinia pestis PY-05]
gi|420583423|ref|ZP_15077626.1| ribosomal protein S2 [Yersinia pestis PY-08]
gi|420605053|ref|ZP_15097040.1| ribosomal protein S2 [Yersinia pestis PY-12]
gi|420610400|ref|ZP_15101873.1| ribosomal protein S2 [Yersinia pestis PY-13]
gi|420615715|ref|ZP_15106580.1| ribosomal protein S2 [Yersinia pestis PY-14]
gi|420621122|ref|ZP_15111349.1| ribosomal protein S2 [Yersinia pestis PY-15]
gi|420636459|ref|ZP_15125181.1| ribosomal protein S2 [Yersinia pestis PY-25]
gi|420642058|ref|ZP_15130238.1| ribosomal protein S2 [Yersinia pestis PY-29]
gi|420652843|ref|ZP_15140010.1| ribosomal protein S2 [Yersinia pestis PY-34]
gi|420668661|ref|ZP_15154243.1| ribosomal protein S2 [Yersinia pestis PY-45]
gi|420679491|ref|ZP_15164081.1| ribosomal protein S2 [Yersinia pestis PY-47]
gi|420684736|ref|ZP_15168784.1| ribosomal protein S2 [Yersinia pestis PY-48]
gi|420689920|ref|ZP_15173377.1| ribosomal protein S2 [Yersinia pestis PY-52]
gi|420707123|ref|ZP_15187950.1| ribosomal protein S2 [Yersinia pestis PY-55]
gi|420723427|ref|ZP_15202278.1| ribosomal protein S2 [Yersinia pestis PY-59]
gi|420729053|ref|ZP_15207301.1| ribosomal protein S2 [Yersinia pestis PY-60]
gi|420777468|ref|ZP_15249838.1| ribosomal protein S2 [Yersinia pestis PY-88]
gi|420782990|ref|ZP_15254673.1| ribosomal protein S2 [Yersinia pestis PY-89]
gi|420788343|ref|ZP_15259389.1| ribosomal protein S2 [Yersinia pestis PY-90]
gi|420793817|ref|ZP_15264330.1| ribosomal protein S2 [Yersinia pestis PY-91]
gi|420798936|ref|ZP_15268935.1| ribosomal protein S2 [Yersinia pestis PY-92]
gi|420809545|ref|ZP_15278514.1| ribosomal protein S2 [Yersinia pestis PY-94]
gi|420815236|ref|ZP_15283611.1| ribosomal protein S2 [Yersinia pestis PY-95]
gi|420831287|ref|ZP_15298076.1| ribosomal protein S2 [Yersinia pestis PY-99]
gi|420841274|ref|ZP_15307104.1| ribosomal protein S2 [Yersinia pestis PY-101]
gi|420846891|ref|ZP_15312175.1| ribosomal protein S2 [Yersinia pestis PY-102]
gi|421762494|ref|ZP_16199291.1| 30S ribosomal protein S2 [Yersinia pestis INS]
gi|25009213|sp|Q8ZH66.1|RS2_YERPE RecName: Full=30S ribosomal protein S2
gi|61215491|sp|Q667I9.1|RS2_YERPS RecName: Full=30S ribosomal protein S2
gi|122979779|sp|Q1CAN6.1|RS2_YERPA RecName: Full=30S ribosomal protein S2
gi|122980004|sp|Q1CFE6.1|RS2_YERPN RecName: Full=30S ribosomal protein S2
gi|166226769|sp|A4TL92.1|RS2_YERPP RecName: Full=30S ribosomal protein S2
gi|167011240|sp|A7FFG9.1|RS2_YERP3 RecName: Full=30S ribosomal protein S2
gi|238687288|sp|A9R396.1|RS2_YERPG RecName: Full=30S ribosomal protein S2
gi|238688486|sp|B1JQG0.1|RS2_YERPY RecName: Full=30S ribosomal protein S2
gi|238691339|sp|B2JZ34.1|RS2_YERPB RecName: Full=30S ribosomal protein S2
gi|51590600|emb|CAH22241.1| 30S ribosomal protein S2 [Yersinia pseudotuberculosis IP 32953]
gi|108776765|gb|ABG19284.1| SSU ribosomal protein S2P [Yersinia pestis Nepal516]
gi|108778428|gb|ABG12486.1| SSU ribosomal protein S2P [Yersinia pestis Antiqua]
gi|115346823|emb|CAL19709.1| 30S ribosomal protein S2 [Yersinia pestis CO92]
gi|145210647|gb|ABP40054.1| SSU ribosomal protein S2P [Yersinia pestis Pestoides F]
gi|149290569|gb|EDM40645.1| 30S ribosomal protein S2 [Yersinia pestis CA88-4125]
gi|152958628|gb|ABS46089.1| ribosomal protein S2 [Yersinia pseudotuberculosis IP 31758]
gi|162353109|gb|ABX87057.1| ribosomal protein S2 [Yersinia pestis Angola]
gi|165921038|gb|EDR38262.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989164|gb|EDR41465.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str. E1979001]
gi|166207475|gb|EDR51955.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166962282|gb|EDR58303.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167055721|gb|EDR65505.1| ribosomal protein S2 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169749849|gb|ACA67367.1| ribosomal protein S2 [Yersinia pseudotuberculosis YPIII]
gi|186699449|gb|ACC90078.1| ribosomal protein S2 [Yersinia pseudotuberculosis PB1/+]
gi|229679329|gb|EEO75432.1| 30S ribosomal subunit protein S2 [Yersinia pestis Nepal516]
gi|229689950|gb|EEO82009.1| 30S ribosomal subunit protein S2 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229697339|gb|EEO87386.1| 30S ribosomal subunit protein S2 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229704128|gb|EEO91140.1| 30S ribosomal subunit protein S2 [Yersinia pestis Pestoides A]
gi|262361097|gb|ACY57818.1| 30S ribosomal protein S2 [Yersinia pestis D106004]
gi|262365339|gb|ACY61896.1| 30S ribosomal protein S2 [Yersinia pestis D182038]
gi|320014178|gb|ADV97749.1| 30S ribosomal subunit protein S2 [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|342856218|gb|AEL74771.1| 30S ribosomal protein S2 [Yersinia pestis A1122]
gi|391429974|gb|EIQ91755.1| ribosomal protein S2 [Yersinia pestis PY-01]
gi|391431127|gb|EIQ92737.1| ribosomal protein S2 [Yersinia pestis PY-02]
gi|391446184|gb|EIR06247.1| ribosomal protein S2 [Yersinia pestis PY-04]
gi|391446792|gb|EIR06787.1| ribosomal protein S2 [Yersinia pestis PY-05]
gi|391463607|gb|EIR21999.1| ribosomal protein S2 [Yersinia pestis PY-08]
gi|391480385|gb|EIR37062.1| ribosomal protein S2 [Yersinia pestis PY-12]
gi|391494229|gb|EIR49483.1| ribosomal protein S2 [Yersinia pestis PY-13]
gi|391495405|gb|EIR50508.1| ribosomal protein S2 [Yersinia pestis PY-15]
gi|391498134|gb|EIR52927.1| ribosomal protein S2 [Yersinia pestis PY-14]
gi|391515091|gb|EIR68140.1| ribosomal protein S2 [Yersinia pestis PY-25]
gi|391525736|gb|EIR77851.1| ribosomal protein S2 [Yersinia pestis PY-29]
gi|391528590|gb|EIR80392.1| ribosomal protein S2 [Yersinia pestis PY-34]
gi|391544985|gb|EIR95131.1| ribosomal protein S2 [Yersinia pestis PY-45]
gi|391559650|gb|EIS08384.1| ribosomal protein S2 [Yersinia pestis PY-47]
gi|391561237|gb|EIS09789.1| ribosomal protein S2 [Yersinia pestis PY-48]
gi|391574283|gb|EIS21210.1| ribosomal protein S2 [Yersinia pestis PY-52]
gi|391586668|gb|EIS31946.1| ribosomal protein S2 [Yersinia pestis PY-55]
gi|391603610|gb|EIS46775.1| ribosomal protein S2 [Yersinia pestis PY-60]
gi|391605166|gb|EIS48084.1| ribosomal protein S2 [Yersinia pestis PY-59]
gi|391659105|gb|EIS95441.1| ribosomal protein S2 [Yersinia pestis PY-88]
gi|391664033|gb|EIS99805.1| ribosomal protein S2 [Yersinia pestis PY-89]
gi|391666072|gb|EIT01584.1| ribosomal protein S2 [Yersinia pestis PY-90]
gi|391672017|gb|EIT06898.1| ribosomal protein S2 [Yersinia pestis PY-91]
gi|391685593|gb|EIT19111.1| ribosomal protein S2 [Yersinia pestis PY-92]
gi|391686543|gb|EIT19953.1| ribosomal protein S2 [Yersinia pestis PY-94]
gi|391698273|gb|EIT30595.1| ribosomal protein S2 [Yersinia pestis PY-95]
gi|391712377|gb|EIT43263.1| ribosomal protein S2 [Yersinia pestis PY-99]
gi|391719046|gb|EIT49223.1| ribosomal protein S2 [Yersinia pestis PY-101]
gi|391729903|gb|EIT58836.1| ribosomal protein S2 [Yersinia pestis PY-102]
gi|411176700|gb|EKS46715.1| 30S ribosomal protein S2 [Yersinia pestis INS]
Length = 241
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL + I+ R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKISSR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A +C +F W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A++ Y TA+ +G+
Sbjct: 184 FSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLGAVATAVREGR 225
>gi|152991279|ref|YP_001357001.1| 30S ribosomal protein S2 [Nitratiruptor sp. SB155-2]
gi|166225288|sp|A6Q585.1|RS2_NITSB RecName: Full=30S ribosomal protein S2
gi|151423140|dbj|BAF70644.1| 30S ribosomal protein S2 [Nitratiruptor sp. SB155-2]
Length = 267
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 105/228 (46%), Gaps = 49/228 (21%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +KD+ + VH GH+ + +MKP+I+GVR+ I DL ++ R N V A
Sbjct: 1 MVTMKDLLECGVHFGHQTRRWNPKMKPFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDAAK 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDC-QEFAHTRFWRQGMFTN------------------ 166
+LFVG Q IE+ A+ C + ++R W G TN
Sbjct: 61 EGKTILFVGTKKQAKNAIEEYAKKCGMPYVNSR-WLGGTLTNFNTIKKSIRKLEIIEEME 119
Query: 167 -------------------SEKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAA 201
EKL R + LPD++ + + + + A+ E
Sbjct: 120 KTGQMDLLTKKEALMLRRKKEKLENFLGGIRDMKGLPDMLFIIDAV----REHIAVKEGN 175
Query: 202 KMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
K+ IP V +D+NC+P+LI YP+PGNDD +IQ +C+ AI++GK
Sbjct: 176 KLGIPIVAPLDTNCDPDLIDYPIPGNDDAIRSIQLFCKEMAEAIIEGK 223
>gi|357406289|ref|YP_004918213.1| 30S ribosomal protein S2 [Methylomicrobium alcaliphilum 20Z]
gi|351718954|emb|CCE24628.1| 30S ribosomal subunit protein S2 [Methylomicrobium alcaliphilum
20Z]
Length = 250
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 112/249 (44%), Gaps = 51/249 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M Y++G R I +L+++ L DA+N++ ++
Sbjct: 4 VSMRQMLEAGVHFGHQTRYWNPKMANYLFGARNKIHIINLEKTLPLFNDAMNYLGQMSAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
G +LFVG + + A+ C W GM TN + + +++ RL +L +
Sbjct: 64 KGTILFVGTKKAARKAVAEEAKRCGMPYVDHRWLGGMLTNFKTIKKSINRLKELEAMKTD 123
Query: 186 ----------------------------------------TLTTVLEPNPAIGEAAKMCI 205
L E N AIGEA K+ I
Sbjct: 124 GTLYHKFSKKEALGMERELAKLERSLGGIKDMKGVPDVLFVLDVGYEKN-AIGEAKKLGI 182
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLS----- 260
P VGIVDSN +P + Y +PGNDD+ A++ YC+ A+L+ K A TL L +
Sbjct: 183 PVVGIVDSNNSPESVDYIIPGNDDSIRAVKLYCESVADAVLEAKSA---TLNLSAQADDF 239
Query: 261 -EKQEVQHN 268
E+ EV+ N
Sbjct: 240 VEESEVEAN 248
>gi|58038564|ref|YP_190528.1| 30S ribosomal protein S2 [Gluconobacter oxydans 621H]
gi|81672763|sp|Q5FUV7.1|RS2_GLUOX RecName: Full=30S ribosomal protein S2
gi|58000978|gb|AAW59872.1| SSU ribosomal protein S2P [Gluconobacter oxydans 621H]
Length = 265
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 99/226 (43%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + M PY++GVR I DL Q+ +L AL V G
Sbjct: 8 MRQLLEAGVHFGHHTRRWNPAMAPYLFGVRNQVHIIDLQQTVPMLDRALKVVRDTVANGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG + + + AQ C ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRAAADHVAEAAQRCGQYYVNHRWLGGMLTNWKTITGSIKRLRQIDEMLSGDT 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T L AI EA K+ IP
Sbjct: 128 AGLTKKEVLDITRDREKLERSLGGIKEMGGLPDLLFVIDTNKEKL----AIEEATKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
+G++DSN NP +TYP+PGNDD AI YC + A+L G A+
Sbjct: 184 VIGVLDSNSNPAGVTYPIPGNDDAIRAITLYCDLVSGAVLDGISAE 229
>gi|398384563|ref|ZP_10542593.1| ribosomal protein S2 [Sphingobium sp. AP49]
gi|397722722|gb|EJK83258.1| ribosomal protein S2 [Sphingobium sp. AP49]
Length = 252
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 103/227 (45%), Gaps = 40/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++ + +A H GH+ + RMKPYI+G R G I DL Q+ L AL+FV+
Sbjct: 5 VVTMQQLIEAGAHFGHQTHRWNPRMKPYIFGDRNGIHILDLSQTVPLFARALDFVSATVA 64
Query: 126 RDGIVLFVGQSAQNSLLIEKTA-QDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
G VLFVG Q I + A + Q F + R W GM TN + + ++ RL L
Sbjct: 65 GGGKVLFVGTKRQAQDPIAEAARKSGQHFVNHR-WLGGMLTNWKTISGSIKRLKTLEEKL 123
Query: 181 ----------VILTNT---------------------LTTVLEPNP---AIGEAAKMCIP 206
+L T + V++ N AI EA + IP
Sbjct: 124 SGDTHGFTKKEVLQMTREREKLELSLGGIRDMNGIPDVMFVIDANKEELAIKEANTLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V I+DSN +P+ I +PVP NDD AI+ YC A KG + Q
Sbjct: 184 VVAILDSNVSPDGIAFPVPANDDASRAIRLYCDAIAAAATKGNRGAQ 230
>gi|346992673|ref|ZP_08860745.1| 30S ribosomal protein S2 [Ruegeria sp. TW15]
Length = 266
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 99/226 (43%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM P+IYG R G I DL Q+ +L AL V + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMGPFIYGSRNGIHIMDLTQTVPMLDQALQAVRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q + I + A+ ++ W G TN + + +++ RL
Sbjct: 68 RVLFVGTKRQAAGPIAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSINRLNQIDEAMEAGA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + L AI EA K+ IP
Sbjct: 128 EGLTKKERLGMERDQGKLQASLGGIREMGGVPDLLFVIDVKKEAL----AIAEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V +VD+NC+P+ + Y +PGNDD AI YC + A L G A+
Sbjct: 184 VVAVVDTNCSPDGVDYIIPGNDDAARAIALYCDLAARAALDGMTAQ 229
>gi|254511567|ref|ZP_05123634.1| ribosomal protein S2 [Rhodobacteraceae bacterium KLH11]
gi|221535278|gb|EEE38266.1| ribosomal protein S2 [Rhodobacteraceae bacterium KLH11]
Length = 260
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM P+IYG R G I DL Q+ +L AL V + G
Sbjct: 1 MRQLLEAGVHFGHQTQRWNPRMGPFIYGSRNGIHIMDLTQTVPMLDQALQAVRDTVAKGG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q + I A+ ++ W G TN + + +++ RL
Sbjct: 61 RVLFVGTKRQAAQPIADAAEKSAQYYMNHRWLGGTLTNWKTVSQSINRLNQIDEAMESGA 120
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + L AI EA K+ IP
Sbjct: 121 EGLTKKERLGMERDQQKLQASLGGIREMGGVPDLLFVIDVKKEAL----AIAEANKLGIP 176
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V +VD+NC+P+ + Y +PGNDD AI YC + A L G A+
Sbjct: 177 VVAVVDTNCSPDGVDYIIPGNDDAARAIALYCDLAARAALDGMTAQ 222
>gi|238751451|ref|ZP_04612943.1| 30S ribosomal protein S2 [Yersinia rohdei ATCC 43380]
gi|238796608|ref|ZP_04640115.1| 30S ribosomal protein S2 [Yersinia mollaretii ATCC 43969]
gi|238710318|gb|EEQ02544.1| 30S ribosomal protein S2 [Yersinia rohdei ATCC 43380]
gi|238719586|gb|EEQ11395.1| 30S ribosomal protein S2 [Yersinia mollaretii ATCC 43969]
Length = 241
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ L +AL + I+ R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELKKISSR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S ++ A +C +F W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASEAVKDAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A++ Y TA+ +G+
Sbjct: 184 FSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLSAVATAVNEGR 225
>gi|337287434|ref|YP_004626907.1| 30S ribosomal protein S2 [Thermodesulfatator indicus DSM 15286]
gi|335360262|gb|AEH45943.1| ribosomal protein S2 [Thermodesulfatator indicus DSM 15286]
Length = 283
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 105/234 (44%), Gaps = 39/234 (16%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K + +A VH GH+ + +MKP+I+G R G I DL Q+ +L A +F+ G
Sbjct: 6 MKQLLEAGVHFGHQTRRWNPKMKPFIFGERNGIHIIDLQQTVKLFDVAYDFLVDTVANGG 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLV------- 181
VLFVG Q I++ A+ C F W G TN + R++ +L L
Sbjct: 66 KVLFVGTKRQAQDTIKEEAERCGMFYVNHRWLGGTLTNFRTIRRSIEKLKQLEEWFEDGT 125
Query: 182 ---------ILTNTLTTVLEPN-----------------------PAIGEAAKMCIPTVG 209
+ L LE N A+ EA K+ IP V
Sbjct: 126 IERFPKKERLKLERLKQKLERNLGGIKDMEDLPQAIYIVDPKKEHIAVLEARKLGIPIVA 185
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQ 263
IVD+NC+P+LI Y +PGNDD AI+ A L+GK ++ L+ ++K+
Sbjct: 186 IVDTNCDPDLIDYIIPGNDDAIRAIKLITSRLADACLEGKALWEEKLQAETDKE 239
>gi|374336414|ref|YP_005093101.1| 30S ribosomal protein S2 [Oceanimonas sp. GK1]
gi|372986101|gb|AEY02351.1| 30S ribosomal protein S2 [Oceanimonas sp. GK1]
Length = 241
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 39/210 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKPYI+G I +L+++ L DALN++ ++A +
Sbjct: 4 VSMRDMLKAGVHFGHQTRFWNPKMKPYIFGASNRVHIINLEKTVPLFNDALNYLGNVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A C ++ W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVKEAATKCDQYYVNHRWLGGMLTNWKTVRQSINRLKDLEAQSQD 123
Query: 183 --------------------LTNTLTTVLE---------------PNPAIGEAAKMCIPT 207
L +L + + + AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDVLFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYY 237
V +VD+N NP+ + Y +PGNDD A+Q Y
Sbjct: 184 VSVVDTNSNPDSVDYIIPGNDDAIRAVQLY 213
>gi|334340436|ref|YP_004545416.1| 30S ribosomal protein S2 [Desulfotomaculum ruminis DSM 2154]
gi|334091790|gb|AEG60130.1| ribosomal protein S2 [Desulfotomaculum ruminis DSM 2154]
Length = 232
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 39/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M PYI+ R G I DL ++ + + + +FV +A
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTVKKVEECYDFVKQLAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G +LFVG Q +++ A+ C F + W GM TN + + + RL +L +
Sbjct: 63 DGGTILFVGTKKQAQEAVKEEAERCGMFFVNQRWLGGMLTNFQTIRNRIDRLHELERMEE 122
Query: 186 TLT------------------------------------TVLEPNP---AIGEAAKMCIP 206
T V++P A+ EA K+ +P
Sbjct: 123 DGTFNVLPKKEVAQLLHEKEKLDKFLGGIKNMRRLPGALFVIDPRKERIAVAEARKLGVP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V IVD+NC+P+ I Y +PGNDD A++ A+L+GK+ +Q
Sbjct: 183 IVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTAKMADAVLEGKQGEQ 229
>gi|242240397|ref|YP_002988578.1| 30S ribosomal protein S2 [Dickeya dadantii Ech703]
gi|242132454|gb|ACS86756.1| ribosomal protein S2 [Dickeya dadantii Ech703]
Length = 241
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL ++ IA R
Sbjct: 4 VSMRDMLKAGVHFGHQTRFWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A +C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVKEAAVNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQAQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALLRTRELDKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + Y +PGNDD A+ Y TA+ +G+
Sbjct: 184 FAIVDTNSDPDGVDYIIPGNDDAIRAVTLYLSAVATAVREGR 225
>gi|56707466|ref|YP_169362.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110669937|ref|YP_666494.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
FSC198]
gi|254370840|ref|ZP_04986845.1| hypothetical protein FTBG_00655 [Francisella tularensis subsp.
tularensis FSC033]
gi|254874305|ref|ZP_05247015.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
MA00-2987]
gi|379716656|ref|YP_005304992.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
TIGB03]
gi|379716734|ref|YP_005305070.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
TIGB03]
gi|379725338|ref|YP_005317524.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
TI0902]
gi|385794075|ref|YP_005830481.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
NE061598]
gi|421754941|ref|ZP_16191899.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
80700075]
gi|61215377|sp|Q5NHY0.1|RS2_FRATT RecName: Full=30S ribosomal protein S2
gi|123169597|sp|Q14JD2.1|RS2_FRAT1 RecName: Full=30S ribosomal protein S2
gi|56603958|emb|CAG44946.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110320270|emb|CAL08329.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
FSC198]
gi|151569083|gb|EDN34737.1| hypothetical protein FTBG_00655 [Francisella tularensis subsp.
tularensis FSC033]
gi|254840304|gb|EET18740.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282158610|gb|ADA78001.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
NE061598]
gi|377826787|gb|AFB80035.1| SSU ribosomal protein S2p (SAe) [Francisella tularensis subsp.
tularensis TI0902]
gi|377828333|gb|AFB78412.1| SSU ribosomal protein S2p (SAe) [Francisella tularensis subsp.
tularensis TIGB03]
gi|377828411|gb|AFB78490.1| SSU ribosomal protein S2p (SAe) [Francisella tularensis subsp.
tularensis TIGB03]
gi|409089485|gb|EKM89525.1| 30S ribosomal protein S2 [Francisella tularensis subsp. tularensis
80700075]
Length = 239
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 39/217 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K+M VH GHK + +MK YI+G+ G I +L+++ L +DA+NFV G
Sbjct: 4 MKEMLSVGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-------- 180
+LFVG Q ++E A+ C + W GM TN + + +++ RL L
Sbjct: 64 KILFVGTKRQAQDIVEAEAKRCGMSFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123
Query: 181 -------VILTNTLT---------------------TVLEPNP---AIGEAAKMCIPTVG 209
+L N T V++ N AI EA K+ I V
Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVA 183
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAIL 246
IVD+N NP I Y +PGNDD +I +Y + F A++
Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVI 220
>gi|357633494|ref|ZP_09131372.1| ribosomal protein S2 [Desulfovibrio sp. FW1012B]
gi|357582048|gb|EHJ47381.1| ribosomal protein S2 [Desulfovibrio sp. FW1012B]
Length = 273
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 39/228 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K + + VH GH+ + +M+P+I+G R G I DL Q+ +L + A ++VA I
Sbjct: 4 VTMKQLLETGVHFGHQTRRWNPKMRPFIFGARNGIHIIDLQQTVKLYQKAHDYVADIVAG 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G V+FVG Q ++K A+ +F T W GM TN + + +++ RL +L
Sbjct: 64 GGRVIFVGTKRQAQESVKKEAERAGQFFVTNRWMGGMLTNFQTIKKSIDRLKNLERMFED 123
Query: 181 -----------VILTNTLTT-------------------VLEPNP---AIGEAAKMCIPT 207
V++ + +++P A+ E K+ IP
Sbjct: 124 GSIKKFPKKEIVMMGREVEKLNATLGGIKNMDRLPQAAFIIDPKREEIAVQECRKLGIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V +VD+NC+P++I + +PGNDD AI+ + A L+G +D
Sbjct: 184 VAVVDTNCDPDVIDHVIPGNDDAIRAIKLFATSIAEACLEGAAQNKDA 231
>gi|381201234|ref|ZP_09908363.1| 30S ribosomal protein S2 [Sphingobium yanoikuyae XLDN2-5]
Length = 252
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 103/227 (45%), Gaps = 40/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++ + +A H GH+ + RMKPYI+G R G I DL Q+ L AL+FV+
Sbjct: 5 VVTMQQLIEAGAHFGHQTHRWNPRMKPYIFGDRNGIHILDLSQTVPLFARALDFVSATVA 64
Query: 126 RDGIVLFVGQSAQNSLLIEKTA-QDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
G VLFVG Q I + A + Q F + R W GM TN + + ++ RL L
Sbjct: 65 GGGKVLFVGTKRQAQDPIAEAARKSGQHFVNHR-WLGGMLTNWKTISGSIKRLKTLEEKL 123
Query: 181 ----------VILTNT---------------------LTTVLEPNP---AIGEAAKMCIP 206
+L T + V++ N AI EA + IP
Sbjct: 124 SGDTHGFTKKEVLQMTREREKLELSLGGIRDMNGIPDVMFVIDANKEELAIKEANTLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V I+DSN +P+ I +PVP NDD AI+ YC A KG + Q
Sbjct: 184 VVAILDSNVSPDGIAFPVPANDDASRAIRLYCDAVAAAATKGNRGAQ 230
>gi|94496944|ref|ZP_01303518.1| ribosomal protein S2 [Sphingomonas sp. SKA58]
gi|94423620|gb|EAT08647.1| ribosomal protein S2 [Sphingomonas sp. SKA58]
Length = 252
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 102/227 (44%), Gaps = 40/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V + + +A H GH+ + RMKPYI+G R G I DL Q+ L AL+FV+
Sbjct: 5 VVSMHQLIEAGAHFGHQTHRWNPRMKPYIFGERNGIHILDLSQTVPLFGRALDFVSATVA 64
Query: 126 RDGIVLFVGQSAQNSLLIEKTA-QDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
G VLFVG Q I A + Q F + R W GM TN + + ++ RL L
Sbjct: 65 AGGKVLFVGTKRQAQDPIADAARKSGQHFVNHR-WLGGMLTNWKTISGSIKRLKTLEEKL 123
Query: 181 ----------VILTNT---------------------LTTVLEPNP---AIGEAAKMCIP 206
+L T + V++ N AI EA + IP
Sbjct: 124 SGDTHGFTKKEVLQMTREREKLELSLGGIRDMNGIPDVMFVIDANKEELAIKEANTLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V I+DSN +P+ I +PVP NDD AI+ YC+ A KG + Q
Sbjct: 184 VVAILDSNVSPDGIAFPVPANDDASRAIRLYCEAVAAAATKGNRGAQ 230
>gi|118580460|ref|YP_901710.1| 30S ribosomal protein S2 [Pelobacter propionicus DSM 2379]
gi|166225292|sp|A1AQN2.1|RS2_PELPD RecName: Full=30S ribosomal protein S2
gi|118503170|gb|ABK99652.1| SSU ribosomal protein S2P [Pelobacter propionicus DSM 2379]
Length = 257
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 104/234 (44%), Gaps = 39/234 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K++ +A VH GH+ + +MKPYI+G R G I DL ++ + A NFV
Sbjct: 4 ISMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRYFKSAYNFVKESVLN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLP--DLVILT 184
VLFVG Q + + AQ C + W GM TN + +++ RL D +
Sbjct: 64 GDTVLFVGTKKQAQDSVCEEAQRCGMHYVNQRWLGGMLTNFTTVKQSIDRLKRIDAMFED 123
Query: 185 NTLTT----------------------------------VLEPNP---AIGEAAKMCIPT 207
T+ V++P AI EA K+ IP
Sbjct: 124 GTIEAYPKKEALQFEKERVKLQKILGGIKGMNRLPGLMFVIDPKNEEIAIQEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSE 261
V IVD+NC+P+ I Y +PGNDD AI+ A+++G +A+ L+ E
Sbjct: 184 VAIVDTNCDPDPIDYVIPGNDDAIRAIRLLSSKMADAVIEGAQARNAALQAEKE 237
>gi|386393639|ref|ZP_10078420.1| ribosomal protein S2 [Desulfovibrio sp. U5L]
gi|385734517|gb|EIG54715.1| ribosomal protein S2 [Desulfovibrio sp. U5L]
Length = 271
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 39/228 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K + + VH GH+ + +M+P+I+G R G I DL Q+ +L + A ++VA I
Sbjct: 4 VTMKQLLETGVHFGHQTRRWNPKMRPFIFGARNGIHIIDLQQTVKLYQKAHDYVADIVAG 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G V+FVG Q ++K A+ +F T W GM TN + + +++ RL +L
Sbjct: 64 GGHVIFVGTKRQAQESVKKEAERAGQFFVTHRWMGGMLTNFQTIKKSIDRLKNLEKMFGD 123
Query: 181 -----------VILTNTLTT-------------------VLEPNP---AIGEAAKMCIPT 207
V++ + +++P A+ E K+ IP
Sbjct: 124 GSIKKFPKKEIVMMGREVEKLNATLGGIKNMDRLPQAAFIIDPKREEIAVQECRKLGIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V +VD+NC+P++I + +PGNDD AI+ + A L+G +D
Sbjct: 184 VAVVDTNCDPDVIDHVIPGNDDAIRAIKLFATSIAEACLEGAAQNKDA 231
>gi|427410885|ref|ZP_18901087.1| 30S ribosomal protein S2 [Sphingobium yanoikuyae ATCC 51230]
gi|425710873|gb|EKU73893.1| 30S ribosomal protein S2 [Sphingobium yanoikuyae ATCC 51230]
Length = 252
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 103/227 (45%), Gaps = 40/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++ + +A H GH+ + RMKPYI+G R G I DL Q+ L AL+FV+
Sbjct: 5 VVTMQQLIEAGAHFGHQTHRWNPRMKPYIFGDRNGIHILDLSQTVPLFARALDFVSATVA 64
Query: 126 RDGIVLFVGQSAQNSLLIEKTA-QDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
G VLFVG Q I + A + Q F + R W GM TN + + ++ RL L
Sbjct: 65 GGGKVLFVGTKRQAQDPIAEAARKSGQHFVNHR-WLGGMLTNWKTISGSIKRLKTLEEKL 123
Query: 181 ----------VILTNT---------------------LTTVLEPNP---AIGEAAKMCIP 206
+L T + V++ N AI EA + IP
Sbjct: 124 SGDTHGFTKKEVLQMTREREKLELSLGGIRDMNGIPDVMFVIDANKEELAIKEANTLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V I+DSN +P+ I +PVP NDD AI+ YC A KG + Q
Sbjct: 184 VVAILDSNVSPDGIAFPVPANDDASRAIRLYCDAVAAAATKGNRGAQ 230
>gi|225630157|ref|YP_002726948.1| ribosomal protein S2 [Wolbachia sp. wRi]
gi|254764500|sp|C0R2L5.1|RS2_WOLWR RecName: Full=30S ribosomal protein S2
gi|225592138|gb|ACN95157.1| ribosomal protein S2 [Wolbachia sp. wRi]
Length = 282
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQI--IFDLDQSAELLRDALNFVAHIA 124
V V+D+ ++ VH GHKI + ++ PYIYGV Q I DL ++ LL+ A+ + +A
Sbjct: 7 VTVRDLAESGVHFGHKISRWNAKIAPYIYGVHQENRIHIIDLRKTLPLLQVAMKVLYDVA 66
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS-------------EKLF 171
++ G +LFVG Q +I A C ++ W GM TN EK+
Sbjct: 67 FQGGRILFVGTKFQAFDIIASEAIRCGQYYVNHRWLGGMLTNWGTVSSSIKTLMQYEKIL 126
Query: 172 -----------------------------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
R + +PD++ + +T + + A+ EA K
Sbjct: 127 NDEDSILTKKELGNIEKKKQKLDKALGGIREMGAIPDILFIIDT----NKEHIAVKEAKK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ IP V I+D+N +P+ ITY +PGNDD+ +I+ YC++ +IL G
Sbjct: 183 LGIPIVAILDTNSDPDGITYLIPGNDDSRKSIELYCKLATDSILAG 228
>gi|85708120|ref|ZP_01039186.1| ribosomal protein S2 [Erythrobacter sp. NAP1]
gi|85689654|gb|EAQ29657.1| ribosomal protein S2 [Erythrobacter sp. NAP1]
Length = 256
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 100/222 (45%), Gaps = 40/222 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ + +A H GH+ + RMKPYI+G R G I DL Q+ L AL+FV
Sbjct: 6 VTMQQLIEAGAHFGHQTHRWNPRMKPYIFGNRNGVHIIDLSQTVPLFARALDFVEQTVRA 65
Query: 127 DGIVLFVGQSAQNSLLIEKTA-QDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G VLFVG Q I + A Q Q F + R W GM TN + + ++ RL L +
Sbjct: 66 GGKVLFVGTKRQAQEPIAEAARQSGQHFVNHR-WLGGMLTNWKTISGSIKRLKTLEEQLS 124
Query: 186 TLTT-----------------------------------VLEPNP---AIGEAAKMCIPT 207
T+ V++ N AI EAA + IP
Sbjct: 125 GDTSGFTKKEVLQLTRERDKLELSLGGIRDMGGIPDVMFVIDANKEDLAIKEAAVLGIPV 184
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+ ++D+N +P I +PVPGNDD A++ YCQ A G+
Sbjct: 185 IAVLDTNVDPTGIAFPVPGNDDASRAVRLYCQAISDAANAGR 226
>gi|365857139|ref|ZP_09397136.1| ribosomal protein S2 [Acetobacteraceae bacterium AT-5844]
gi|363716663|gb|EHM00061.1| ribosomal protein S2 [Acetobacteraceae bacterium AT-5844]
Length = 268
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 100/228 (43%), Gaps = 46/228 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ + +A VH GH + +M PYI+GVR I DL Q+ L+ AL + +
Sbjct: 6 VSLRQLLEAGVHFGHHTRRWNPKMAPYIFGVRNQVHILDLQQTVPLMDRALRAIRDVVAG 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
G VLFVG + + A C ++ W GM TN
Sbjct: 66 GGRVLFVGTKKSAAEYVADAATRCGQYYVNHRWLGGMLTNWKTITGSIKRLKQMDEQLQG 125
Query: 167 ----------------SEKLFRA------VTRLPDLVILTNTLTTVLEPNPAIGEAAKMC 204
EKL RA + LPD++ + + V++ AI EA K+
Sbjct: 126 NTQGLTKKEILMLTREREKLDRALGGIREMGGLPDIIFVID----VVKEKLAIEEANKLG 181
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
IP V ++DSN +P+ I +P+PGNDD AI YC + A+ G A+
Sbjct: 182 IPVVAVLDSNADPSGIAFPIPGNDDAIRAINLYCDLVAGAVFDGISAE 229
>gi|347754101|ref|YP_004861665.1| 30S ribosomal protein S2P [Candidatus Chloracidobacterium
thermophilum B]
gi|347586619|gb|AEP11149.1| SSU ribosomal protein S2P [Candidatus Chloracidobacterium
thermophilum B]
Length = 262
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 105/220 (47%), Gaps = 39/220 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K++ +A VH GH++ + +MK YI+G R G I DL ++ LLR+A+ F+A A G
Sbjct: 1 MKELLEAGVHFGHQVRRWNPKMKEYIFGERNGIYIIDLQKTQRLLREAVRFIAQTAAEGG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT---- 184
VLFVG Q I + A C + W G+ TN + + R++ R+ +L ++
Sbjct: 61 TVLFVGTKRQAQDAIAEEATRCGMPYVNQRWLGGLLTNFQTIQRSMKRMRELEVMRTDGH 120
Query: 185 -NTLT-----------TVLEPN-----------------------PAIGEAAKMCIPTVG 209
+LT LE N AI EA ++ IP V
Sbjct: 121 YQSLTKKEILRIEKEYARLERNFSGIRTMNRLPKALFVIDTKKEEIAIAEANRLGIPVVA 180
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+VD+NC+P + Y +PGNDD +++ A+++G+
Sbjct: 181 LVDTNCSPLGVDYVIPGNDDALRSVRLISAKIADAVIEGR 220
>gi|359446683|ref|ZP_09236334.1| small subunit ribosomal protein S2 [Pseudoalteromonas sp. BSi20439]
gi|358039489|dbj|GAA72583.1| small subunit ribosomal protein S2 [Pseudoalteromonas sp. BSi20439]
Length = 242
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 104/224 (46%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+Q+ + AL F++ A
Sbjct: 4 VSMRDMLQAGVHFGHQARYWNPKMKPFIFGARNRVHIINLEQTVPMFNTALKFLSSAAAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG S +++ A +F W GM TN + + +++ RL DL
Sbjct: 64 KGKVLFVGTKRAASEAVKEAALQSDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQD 123
Query: 181 -----------VILTNTLTTVLE-----------PNP-----------AIGEAAKMCIPT 207
++LT + + + P+ AI EA + IP
Sbjct: 124 GTFEKLTKKEALMLTREMEKLEKSLGGIKNMGGLPDAIFVIDADHEHIAIREANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V IVD+N NP+ + Y VPGNDD AI Y AI +G+++
Sbjct: 184 VAIVDTNSNPDGVDYIVPGNDDAIRAINLYTSAVAAAITEGRES 227
>gi|57239236|ref|YP_180372.1| 30S ribosomal protein S2 [Ehrlichia ruminantium str. Welgevonden]
gi|58579198|ref|YP_197410.1| 30S ribosomal protein S2 [Ehrlichia ruminantium str. Welgevonden]
gi|58617251|ref|YP_196450.1| 30S ribosomal protein S2 [Ehrlichia ruminantium str. Gardel]
gi|75507503|sp|Q5FGZ8.1|RS2_EHRRG RecName: Full=30S ribosomal protein S2
gi|81672800|sp|Q5HB22.1|RS2_EHRRW RecName: Full=30S ribosomal protein S2
gi|57161315|emb|CAH58238.1| 30S ribosomal protein S2 [Ehrlichia ruminantium str. Welgevonden]
gi|58416863|emb|CAI27976.1| 30S ribosomal protein S2 [Ehrlichia ruminantium str. Gardel]
gi|58417824|emb|CAI27028.1| 30S ribosomal protein S2 [Ehrlichia ruminantium str. Welgevonden]
Length = 286
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 38/221 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++D+ + VH GHK + +M PYIYGV I +L + LL++AL+ + I + G
Sbjct: 9 MRDLVECGVHFGHKTSRWNPKMAPYIYGVHNDIHIINLQSTVFLLKNALSALYDIVLKRG 68
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPD----LVILT 184
VLF+G Q S +I A C ++ W GM TN E + ++ +L + L +
Sbjct: 69 RVLFIGTKVQASAIIADEATRCGQYYINNRWLGGMLTNWETISLSIKKLREYEKLLQNVD 128
Query: 185 NTLTT-------------------------------VLEPNP---AIGEAAKMCIPTVGI 210
N T V++ N AI EA K+ IP + +
Sbjct: 129 NQFTKKELLLFEKKRAKLDRSIGGICNMGGLPHVIFVIDTNKERIAIREANKLNIPVIAV 188
Query: 211 VDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+D+N +P I YP+PGNDD +I ++C++ IL+ ++
Sbjct: 189 LDTNSDPTGIDYPIPGNDDAVRSIDFFCKIISDTILEAIRS 229
>gi|50119971|ref|YP_049138.1| 30S ribosomal protein S2 [Pectobacterium atrosepticum SCRI1043]
gi|61215524|sp|Q6D8E3.1|RS2_ERWCT RecName: Full=30S ribosomal protein S2
gi|49610497|emb|CAG73942.1| 30S ribosomal protein S2 [Pectobacterium atrosepticum SCRI1043]
Length = 241
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+ + + DAL + IA R
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLENTVPMFNDALAELGKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S ++ +A +C +F W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASEAVKDSANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L +L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELDKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+VD+N +P+ + + +PGNDD AI Y TA+ +G+
Sbjct: 184 FAVVDTNSDPDGVDFIIPGNDDAIRAINLYLGAVATAVREGR 225
>gi|323701845|ref|ZP_08113515.1| ribosomal protein S2 [Desulfotomaculum nigrificans DSM 574]
gi|333923701|ref|YP_004497281.1| 30S ribosomal protein S2 [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|323533149|gb|EGB23018.1| ribosomal protein S2 [Desulfotomaculum nigrificans DSM 574]
gi|333749262|gb|AEF94369.1| ribosomal protein S2 [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 232
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 39/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M PYI+ R G I DL ++ + +A FV +A
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTVRKVEEAYEFVKQLAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G ++FVG Q +++ A+ C + + W GM TN + + + RL +L +
Sbjct: 63 EGGSIMFVGTKKQAQEAVKEEAERCGMYYVNQRWLGGMLTNFQTIRHRIDRLHELERMEE 122
Query: 186 TLTTVLEPNP---------------------------------------AIGEAAKMCIP 206
T + P A+ EA K+ IP
Sbjct: 123 DGTFEVLPKKEVAQLLHEKEKLDKFLGGIKNMRRLPGALFIIDPRKERIAVAEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V IVD+NC+P+ I Y +PGNDD A++ A+L+GK+ +Q
Sbjct: 183 IVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTAKIADAVLEGKQGEQ 229
>gi|313143674|ref|ZP_07805867.1| 30S ribosomal protein S2 [Helicobacter cinaedi CCUG 18818]
gi|313128705|gb|EFR46322.1| 30S ribosomal protein S2 [Helicobacter cinaedi CCUG 18818]
gi|396077987|dbj|BAM31363.1| 30S ribosomal protein S2 [Helicobacter cinaedi ATCC BAA-847]
Length = 262
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 50/243 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +KD+ + VH GH+ + +MK +I+GVR+ I DL ++ R N V +A
Sbjct: 1 MVTMKDLLECGVHFGHQTRRWNPKMKRFIFGVRKNIHIIDLQKTLRYFRYTYNIVKEVAS 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+++FVG Q S ++ A+ W GM TN
Sbjct: 61 EGKVIMFVGTKKQASETLKAYAESVNAPYVNYRWLGGMLTNFSTIKKSVRKLEIIEEMES 120
Query: 167 ---------SEKLF---------------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + + PD++ + + + A+ EA +
Sbjct: 121 SGQIDLLTKKEKLMLQRKKEKLDKYLGGVRHMKKAPDMIFVIDAAKEKI----AVAEARR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+ IP V +D+NC+P+++ YP+PGNDD +IQ +C+ AIL+G+ +D L E+
Sbjct: 177 LGIPVVAPLDTNCDPDMVDYPIPGNDDAIRSIQLFCKEISEAILEGRAENKD---LQDEQ 233
Query: 263 QEV 265
EV
Sbjct: 234 GEV 236
>gi|183597597|ref|ZP_02959090.1| hypothetical protein PROSTU_00879 [Providencia stuartii ATCC 25827]
gi|386744341|ref|YP_006217520.1| 30S ribosomal protein S2 [Providencia stuartii MRSN 2154]
gi|188023093|gb|EDU61133.1| ribosomal protein S2 [Providencia stuartii ATCC 25827]
gi|384481034|gb|AFH94829.1| 30S ribosomal protein S2 [Providencia stuartii MRSN 2154]
Length = 241
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL + IA R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A C ++ W GM TN + + +++ RL DL +
Sbjct: 64 KGKILFVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEVQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRSRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ I + +PGNDD AI+ Y T++ +G+
Sbjct: 184 FAIVDTNSDPDGIDFVIPGNDDAIRAIKLYLSAVATSVREGR 225
>gi|160945235|ref|ZP_02092461.1| hypothetical protein FAEPRAM212_02754 [Faecalibacterium prausnitzii
M21/2]
gi|158442966|gb|EDP19971.1| ribosomal protein S2 [Faecalibacterium prausnitzii M21/2]
Length = 259
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 100/234 (42%), Gaps = 40/234 (17%)
Query: 60 YFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNF 119
YF + +V +K + +A VH GH+ + +M YI+ R G I DL ++ + L +A N+
Sbjct: 17 YF-IMAVVSMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKLDEAYNY 75
Query: 120 VAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPD 179
V +A G +LFVG Q I A C W GM TN + + + R+
Sbjct: 76 VKEVAAEGGDILFVGTKKQAQESIRDEALRCGMHYVNARWLGGMMTNFRTIRKRIDRMDQ 135
Query: 180 LVILTNTLTTVLEPNP---------------------------------------AIGEA 200
L + T L P A+ EA
Sbjct: 136 LAKMKENGTFELLPKKEVAKLELEMEKLDKYLGGVKNMKTLPKAMFIVDPHKERIAVAEA 195
Query: 201 AKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
K+ IP V IVD+NCNP+ I Y +PGNDD A++ A+L+GK+ Q+
Sbjct: 196 RKLNIPIVAIVDTNCNPDEIDYVIPGNDDAIRAVKLIAGAMADAVLEGKQGNQE 249
>gi|334344981|ref|YP_004553533.1| 30S ribosomal protein S2 [Sphingobium chlorophenolicum L-1]
gi|334101603|gb|AEG49027.1| ribosomal protein S2 [Sphingobium chlorophenolicum L-1]
Length = 252
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 102/227 (44%), Gaps = 40/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V + + +A H GH+ + RMKPYI+G R G I DL Q+ L AL+FV+
Sbjct: 5 VVTMHQLIEAGAHFGHQTHRWNPRMKPYIFGERNGIHILDLSQTVPLFGRALDFVSATVA 64
Query: 126 RDGIVLFVGQSAQNSLLIEKTA-QDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
G VLFVG Q I + A + Q F + R W GM TN + + ++ RL L
Sbjct: 65 AGGKVLFVGTKRQAQDPIAEAARKSGQHFVNHR-WLGGMLTNWKTISGSIKRLKTLEEKL 123
Query: 181 ----------VILTNT---------------------LTTVLEPNP---AIGEAAKMCIP 206
+L T + V++ N AI EA + IP
Sbjct: 124 SGDTHGFTKKEVLQMTREREKLELSLGGIRDMNGIPDVMFVIDANKEELAIKEANTLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V I+DSN +P+ I +PVP NDD AI+ YC A KG + Q
Sbjct: 184 VVAILDSNVSPDGIAFPVPANDDASRAIRLYCDAIAAAATKGNRGAQ 230
>gi|294012402|ref|YP_003545862.1| 30S ribosomal protein S2 [Sphingobium japonicum UT26S]
gi|390166699|ref|ZP_10218957.1| 30S ribosomal protein S2 [Sphingobium indicum B90A]
gi|390168427|ref|ZP_10220387.1| 30S ribosomal protein S2 [Sphingobium indicum B90A]
gi|292675732|dbj|BAI97250.1| ribosomal protein S2 [Sphingobium japonicum UT26S]
gi|389588982|gb|EIM67017.1| 30S ribosomal protein S2 [Sphingobium indicum B90A]
gi|389590485|gb|EIM68475.1| 30S ribosomal protein S2 [Sphingobium indicum B90A]
Length = 252
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 102/227 (44%), Gaps = 40/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V + + +A H GH+ + RMKPYI+G R G I DL Q+ L AL+FV+
Sbjct: 5 VVTMHQLIEAGAHFGHQTHRWNPRMKPYIFGERNGIHILDLSQTVPLFGRALDFVSATVA 64
Query: 126 RDGIVLFVGQSAQNSLLIEKTA-QDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
G VLFVG Q I + A + Q F + R W GM TN + + ++ RL L
Sbjct: 65 AGGKVLFVGTKRQAQDPIAEAARKSGQHFVNHR-WLGGMLTNWKTISGSIKRLKTLEEKL 123
Query: 181 ----------VILTNT---------------------LTTVLEPNP---AIGEAAKMCIP 206
+L T + V++ N AI EA + IP
Sbjct: 124 SGDTHGFTKKEVLQMTREREKLELSLGGIRDMNGIPDVMFVIDANKEELAIKEANTLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V I+DSN +P+ I +PVP NDD AI+ YC A KG + Q
Sbjct: 184 VVAILDSNVSPDGIAFPVPANDDASRAIRLYCDAIAAAATKGNRGAQ 230
>gi|410667464|ref|YP_006919835.1| 30S ribosomal protein S2 [Thermacetogenium phaeum DSM 12270]
gi|409105211|gb|AFV11336.1| 30S ribosomal protein S2 [Thermacetogenium phaeum DSM 12270]
Length = 249
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M PYI+ R G I DL ++ + + +A NF+ +
Sbjct: 3 IISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKMEEAYNFIKEVVS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
VLFVG Q + + A+ C F W GM TN + + + + RL +L +
Sbjct: 63 EGKSVLFVGTKKQAQDSVREEAERCGMFYVNVRWLGGMLTNFQTIRKRIERLRELEKMEE 122
Query: 186 TLTTVLEPNP---------------------------------------AIGEAAKMCIP 206
T L P A+ EA K+ IP
Sbjct: 123 TGHFELLPKKEVTKLQAEKEKLLRFLGGIKDMDELPGALFIVDTRKEHIAVCEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
TVGIVD+NC+P+ I Y +PGNDD A++ A+L+ K+
Sbjct: 183 TVGIVDTNCDPDEIDYVIPGNDDAIRAVRLLTSKIADAVLEAKQG 227
>gi|167630324|ref|YP_001680823.1| 30S ribosomal protein S2 [Heliobacterium modesticaldum Ice1]
gi|238687987|sp|B0THD7.1|RS2_HELMI RecName: Full=30S ribosomal protein S2
gi|167593064|gb|ABZ84812.1| 30S ribosomal protein s2 [Heliobacterium modesticaldum Ice1]
Length = 232
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 39/229 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M PYI+ R G I DL ++ + +A NF+ +A
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVRKVDEAYNFIREVAT 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
+ +LFVG Q +++ A+ C + + W GM TN + + + ++RL +L +
Sbjct: 63 QGKKILFVGTKKQAQDSVKEEAERCGMYYVNQRWLGGMLTNFQTIQKRISRLRELEKMEA 122
Query: 186 TLT------------------------------------TVLEPNP---AIGEAAKMCIP 206
T V++P A+ EA ++ IP
Sbjct: 123 DGTFEVLPKKEVSKLLHEKEKLERFLGGIKDMKELPGAIFVIDPRKERIAVAEARRLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
VGIVD+NC+P+ I Y +PGNDD A++ A+L+G + + D
Sbjct: 183 LVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTAKMADAVLEGNQGQSDA 231
>gi|307129820|ref|YP_003881836.1| 30S ribosomal protein S2 [Dickeya dadantii 3937]
gi|306527349|gb|ADM97279.1| 30S ribosomal subunit protein S2 [Dickeya dadantii 3937]
Length = 241
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL ++ I+ R
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKISSR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A +C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQAQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALLRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + Y +PGNDD A+ Y TA+ +G+
Sbjct: 184 FAIVDTNSDPDGVDYIIPGNDDAIRAVSLYLGAVATAVREGR 225
>gi|239617911|ref|YP_002941233.1| 30S ribosomal protein S2 [Kosmotoga olearia TBF 19.5.1]
gi|239506742|gb|ACR80229.1| ribosomal protein S2 [Kosmotoga olearia TBF 19.5.1]
Length = 275
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 104/232 (44%), Gaps = 53/232 (22%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +MKPYIYG R+G I DL ++ +LL ++V A
Sbjct: 3 VVTMKQLLEAGVHFGHRTRRWNPKMKPYIYGERKGIYIIDLQKTLKLLDQTYDYVRERAR 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+FVG Q +IE A+ C W G+ TN
Sbjct: 63 EGATFMFVGTKRQAQQIIENEAKRCGAAYVNNRWLGGLLTNFTTIRKRIEVLKQYEEMEI 122
Query: 167 ------------------SEKL------FRAVTRLPDLVILTNTLTTVLEPNP---AIGE 199
EKL + + R+PD++ V++P A+ E
Sbjct: 123 SGELDALPKKEQSRIRKKLEKLRKNLNGVKDMERIPDVIY-------VVDPKKEEIAVAE 175
Query: 200 AAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
A K+ I +GI D+NC+P+++ Y VPGNDD AIQ + AIL+G++
Sbjct: 176 ANKLGITVIGIADTNCDPDVLDYLVPGNDDAIRAIQLITRTIADAILEGREG 227
>gi|289549251|ref|YP_003474239.1| 30S ribosomal protein S2 [Thermocrinis albus DSM 14484]
gi|289182868|gb|ADC90112.1| ribosomal protein S2 [Thermocrinis albus DSM 14484]
Length = 278
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 47/231 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++++ +A VH GH + +M P++YGVR I DL+++ L A +FVA
Sbjct: 3 VVSMRELLEAGVHFGHTKSRWNPKMAPFLYGVRHDIHIIDLNKTLVYLEQAYHFVADSVA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------S 167
R VLFVG Q +I++ A+ W G+ TN +
Sbjct: 63 RGAEVLFVGTKKQAKDVIKEEAERAGVHYINERWVGGLLTNFRTVRKSILKLKTLERMEA 122
Query: 168 EKLF--------RAV-----------------TRLPDLVILTNTLTTVLEPNPAIGEAAK 202
E +F RA+ TRLPD++ + +T+ + A+ EA K
Sbjct: 123 EGVFDVLPKKEVRALKRKMERLRKLYGGIVNMTRLPDIIWVVDTV----REHIAVQEARK 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+ I V I+DSNC+P+L+ YPVPGNDD +I+ AI++GK ++
Sbjct: 179 LGITVVAILDSNCDPDLVDYPVPGNDDAIKSIKLLTSKIADAIIEGKTRRE 229
>gi|406940479|gb|EKD73226.1| hypothetical protein ACD_45C00396G0004 [uncultured bacterium]
Length = 261
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 110/241 (45%), Gaps = 39/241 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++DM A VH GH+ + +M YI+G R I +L+++ L+ DALNF+ IA +
Sbjct: 5 INMRDMLKAGVHFGHQTCHWNPKMATYIFGARNKIHIINLEKTVPLMEDALNFMGGIAAK 64
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G +LFVG +I++ A C W GM TN + + +++ RL +L
Sbjct: 65 KGKILFVGTKPAAQEIIKEEAMRCYMPYVNHRWLGGMLTNYKTIRQSIKRLKELEAMFEK 124
Query: 181 ---------VILTNT------------------------LTTVLEPNPAIGEAAKMCIPT 207
IL T + V A+ EA ++ IP
Sbjct: 125 SSFGRLTKKEILNLTRDKAKLERSLGGIKNMGGLPDALFVVDVGHEKIAVAEANRLGIPV 184
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEVQH 267
+GIVD+N +P I Y +PGNDD+ +IQ Y + IL + + + ++ SE E++
Sbjct: 185 IGIVDTNNSPEGINYIIPGNDDSLRSIQLYTKTVADCILDARASNPEIAQVGSEFVEIEE 244
Query: 268 N 268
Sbjct: 245 G 245
>gi|386760915|ref|YP_006234550.1| 30S ribosomal protein S2 [Helicobacter cinaedi PAGU611]
gi|385145931|dbj|BAM11439.1| 30S ribosomal protein S2 [Helicobacter cinaedi PAGU611]
Length = 262
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 50/243 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +KD+ + VH GH+ + +MK +I+GVR+ I DL ++ R N V +A
Sbjct: 1 MVTMKDLLECGVHFGHQTRRWNPKMKRFIFGVRKNIHIIDLQKTLRYFRYTYNIVKEVAS 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+++FVG Q S ++ A+ W GM TN
Sbjct: 61 EGKVIMFVGTKKQASETLKAYAESVNAPYVNYRWLGGMLTNFSTIKKSVRKLEIIEEMES 120
Query: 167 ---------SEKLF---------------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + + PD++ + + + A+ EA +
Sbjct: 121 SGQIDLLTKKEKLMLQRKKEKLDKYLGGVRHMKKAPDMIFVIDAAKEKI----AVAEARR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+ IP V +D+NC+P+++ YP+PGNDD +IQ +C+ AIL+G+ +D L E+
Sbjct: 177 LGIPVVAPLDTNCDPDMVDYPIPGNDDAIRSIQLFCKEISEAILEGRAENKD---LQDEQ 233
Query: 263 QEV 265
EV
Sbjct: 234 GEV 236
>gi|320540032|ref|ZP_08039688.1| 30S ribosomal subunit protein S2 [Serratia symbiotica str. Tucson]
gi|320029881|gb|EFW11904.1| 30S ribosomal subunit protein S2 [Serratia symbiotica str. Tucson]
Length = 241
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+Q+ + AL + IA R
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEQTVPMFNAALAELTKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A +C ++ W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASEAVKEAAHNCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELAKLENSLDGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A+ Y TA+ +G+
Sbjct: 184 FSIVDTNSDPDGVDFIIPGNDDAIRAVNLYLTAVATAVREGR 225
>gi|334139062|ref|ZP_08512461.1| ribosomal protein S2 [Paenibacillus sp. HGF7]
gi|333603240|gb|EGL14659.1| ribosomal protein S2 [Paenibacillus sp. HGF7]
Length = 232
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 39/229 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M YI+ R G I DL ++ + + +A NFV ++
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMDKYIFTERNGIYIIDLQKTVKKVEEAYNFVKSVSA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
+G ++FVG Q +++ A+ C F + W G TN + + + + RL +L
Sbjct: 63 ENGTIMFVGTKKQAQDSVKEEAERCGMFYINQRWLGGTLTNFQTIQKRINRLKELEKMEQ 122
Query: 181 -----------VILTN--------------------TLTTVLEPNP---AIGEAAKMCIP 206
VI+ N + +++P A+ EA K+ IP
Sbjct: 123 DGTFELLPKKEVIILNKEKDRLDKFLGGIKGMKGLPSALFIIDPRKERIAVAEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
VGIVD+NC+P+ I Y +PGNDD A++ A+++ + +Q T
Sbjct: 183 IVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVIEANQGEQTT 231
>gi|309751420|gb|ADO81404.1| 30S ribosomal protein S2 [Haemophilus influenzae R2866]
Length = 251
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 108/237 (45%), Gaps = 39/237 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM +A VH GH+ + +MKP+I+G R G I +L+++ L +AL + IA
Sbjct: 15 VSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRIASN 74
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
+G VLFVG S ++ A DCQ++ W GM TN + + +++ RL DL
Sbjct: 75 NGKVLFVGTKRAASEAVQVAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 134
Query: 181 ----------VILTNTLTTVLE------------PNP-----------AIGEAAKMCIPT 207
++ + LE P+ A+ EA + IP
Sbjct: 135 GTFDKLTKKEALMRSREMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLGIPV 194
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQE 264
IVD+N P + + +PGNDD AIQ Y A+ +G+ + + L+ E
Sbjct: 195 FAIVDTNSTPAGVDFVIPGNDDATRAIQLYVSAAAAAVKEGRGNEAQVAEELAADAE 251
>gi|148269311|ref|YP_001243771.1| 30S ribosomal protein S2 [Thermotoga petrophila RKU-1]
gi|281411991|ref|YP_003346070.1| 30S ribosomal protein S2 [Thermotoga naphthophila RKU-10]
gi|147734855|gb|ABQ46195.1| SSU ribosomal protein S2P [Thermotoga petrophila RKU-1]
gi|281373094|gb|ADA66656.1| ribosomal protein S2 [Thermotoga naphthophila RKU-10]
Length = 260
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 39/225 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M PYIY R+G I DL ++ +LL +A FV A
Sbjct: 3 VVTMKQLLEAGVHFGHRTRRWNPKMAPYIYTERKGIYIIDLQKTQQLLEEAYYFVREKAS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
+LFVG Q +I+ A+ C F W G+ TN + + + +L +L +
Sbjct: 63 EGATILFVGTKKQAQGVIKAEAERCGAFYVNNRWLGGLLTNFKTIRSRIEKLIELEEMEQ 122
Query: 186 T------------------------------------LTTVLEPNP---AIGEAAKMCIP 206
+ + +++P A+ EA K+ IP
Sbjct: 123 SGKLDELPKKEQSRIRRILEKLRKNLGGLKEMRKIPDIIYIVDPRKERIAVAEANKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V IVD+NC+P+ I Y +PGNDD +I+ V A L+G++
Sbjct: 183 IVAIVDTNCDPDPIDYVIPGNDDAIRSIKLITSVIANAYLEGREG 227
>gi|187932155|ref|YP_001892140.1| 30S ribosomal protein S2 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187713064|gb|ACD31361.1| 30S ribosomal protein S2 [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 239
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 39/217 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K+M A VH GHK + +MK YI+G+ G I +L+++ L +DA+NFV G
Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-------- 180
++FVG Q ++E A+ C + W GM TN + + +++ RL L
Sbjct: 64 KIIFVGTKRQAQDIVEAEAKRCGMPFVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123
Query: 181 -------VILTNTLT---------------------TVLEPNP---AIGEAAKMCIPTVG 209
+L N T V++ N AI EA K+ I V
Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVA 183
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAIL 246
IVD+N NP I Y +PGNDD +I +Y + F A++
Sbjct: 184 IVDTNSNPEGIDYIIPGNDDAVKSISFYMKKFADAVI 220
>gi|149195090|ref|ZP_01872182.1| 30S ribosomal protein S2 [Caminibacter mediatlanticus TB-2]
gi|149134803|gb|EDM23287.1| 30S ribosomal protein S2 [Caminibacter mediatlanticus TB-2]
Length = 274
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 47/225 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+KD+ + VH GH+ + +MK YI+GVR+ I DL ++ L+ A N V A
Sbjct: 1 MKDLLECGVHFGHQKRRWNPKMKKYIFGVRKNIYIIDLQKTLRHLKYACNVVRDAAAEGK 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
+LFVG Q I++ A+ C W GM TN
Sbjct: 61 TILFVGTKKQAVDAIKEHAERCGMPYVNHRWLGGMLTNFKTIQKSIRKLEIIEKMQESGQ 120
Query: 167 ------SEKLF---------------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
E+L R + ++PD++ + +T+ + A+ EA K+ +
Sbjct: 121 VNLLTKKERLILERRRAKLERVLGGIRNMKKIPDMLFIIDTVKEKI----AVQEANKLGL 176
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
P V VD+NC+P+LI YP+PGNDD ++ +C+ AI++GK+
Sbjct: 177 PIVAPVDTNCDPDLIDYPIPGNDDAIRSVNLFCKTMADAIIEGKE 221
>gi|58698904|ref|ZP_00373769.1| ribosomal protein S2 [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58534585|gb|EAL58719.1| ribosomal protein S2 [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 276
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQI--IFDLDQSAELLRDALNFVAHIA 124
V V+D+ ++ VH GHKI + ++ PYIYGV Q I DL ++ LL+ A+ + +A
Sbjct: 1 VTVRDLAESGVHFGHKISRWNAKIAPYIYGVHQENRIHIIDLRKTLPLLQVAMKVLYDVA 60
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS-------------EKLF 171
++ G +LFVG Q +I A C ++ W GM TN EK+
Sbjct: 61 FQGGRILFVGTKFQAFDIIASEAIRCGQYYVNHRWLGGMLTNWGTVSSSIKTLMQYEKIL 120
Query: 172 -----------------------------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
R + +PD++ + +T + + A+ EA K
Sbjct: 121 NDEDSILTKKELGNIEKKKQKLDKALGGIREMGAIPDILFIIDT----NKEHIAVKEAKK 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ IP V I+D+N +P+ ITY +PGNDD+ +I+ YC++ +IL G
Sbjct: 177 LGIPIVAILDTNSDPDGITYLIPGNDDSRKSIELYCKLATDSILAG 222
>gi|407793386|ref|ZP_11140420.1| 30S ribosomal protein S2 [Idiomarina xiamenensis 10-D-4]
gi|407215009|gb|EKE84850.1| 30S ribosomal protein S2 [Idiomarina xiamenensis 10-D-4]
Length = 242
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + ALN++ H++
Sbjct: 4 VSMRDMLKAGVHFGHQTRFWNPKMKPFIFGARNRIHIINLEKTVPMFNSALNYMQHVSSN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
G +LFVG + +++ A +C +F W GM TN + + +++ RL DL ++
Sbjct: 64 KGKILFVGTKRAAAESVKEAANNCNQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETMSQD 123
Query: 187 LT------------------------------------TVLEPNP---AIGEAAKMCIPT 207
T V++ + AI EA + IP
Sbjct: 124 GTFDKLTKKEALMNTREMEKLEKSLGGIKNMGGLPDVIFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V +VD+N NP+ + Y +PGNDD A+ Y AI + + A
Sbjct: 184 VAVVDTNSNPDGVDYVIPGNDDAIRAVNLYLGSAANAINEARNA 227
>gi|284008520|emb|CBA75043.1| 30S ribosomal protein S2 [Arsenophonus nasoniae]
Length = 241
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 104/226 (46%), Gaps = 39/226 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MK YI+GVR I +L+++ + +AL + IA R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKTYIFGVRNKVHIINLEKTVPMFNEALAELTKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S I++ A C ++ W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAIKEAANGCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + E P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELSKLENSLGGIKEMGGLPDALFVIDAEHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
IVD+N +P+ + Y +PGNDD A++ Y A+ +G+ Q
Sbjct: 184 FAIVDTNSDPDGVDYIIPGNDDAIRAVKLYLDAVAKAVHEGRSQDQ 229
>gi|187251058|ref|YP_001875540.1| 30S ribosomal protein S2 [Elusimicrobium minutum Pei191]
gi|238058196|sp|B2KC76.1|RS2_ELUMP RecName: Full=30S ribosomal protein S2
gi|186971218|gb|ACC98203.1| Ribosomal protein S2 [Elusimicrobium minutum Pei191]
Length = 324
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 47/226 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K M +A VH GH+ + +M YI+G R G I DL ++A+ L+ A F+ A +
Sbjct: 4 VSMKAMLEAGVHFGHQTSRWNPKMGQYIFGERNGVHILDLQKTAKELKKATAFIKEEAKK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------SE 168
LFVG Q I+ A+ C + + W G TN E
Sbjct: 64 GARFLFVGTKKQAQEAIKSEAERCGAYVISEKWLGGTLTNFQTVKKSVERLNELEKWERE 123
Query: 169 KLFRAVTR-------------------------LPDLVILTNTLTTVLEPNPAIGEAAKM 203
+F+A+++ LPD+V + + + T A+ EA +
Sbjct: 124 GVFKAISKKEASRLGKEMVRLQTLLGGIREMKSLPDVVFVIDPVDT----QGAVKEAVIL 179
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IP V + D+N +P+ I YP+PGNDD +I+ +C +I++G+
Sbjct: 180 NIPVVAVCDTNADPDNIDYPIPGNDDAARSIKLFCAAVADSIIEGR 225
>gi|50085372|ref|YP_046882.1| 30S ribosomal protein S2 [Acinetobacter sp. ADP1]
gi|61215533|sp|Q6FA53.1|RS2_ACIAD RecName: Full=30S ribosomal protein S2
gi|49531348|emb|CAG69060.1| 30S ribosomal protein S2 [Acinetobacter sp. ADP1]
Length = 249
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 104/238 (43%), Gaps = 39/238 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++D+ A H GH+ + +M+ YI+G R I +L+ + L DALNF +A +
Sbjct: 6 VSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFANQLASK 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
VLFVG S +I + AQ + W GM TN + L +++ RL DL +
Sbjct: 66 KNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQD 125
Query: 186 ------TLTTVLE---------------------PNP-----------AIGEAAKMCIPT 207
T LE P+ AI EA + IP
Sbjct: 126 GTFAKLTKREALERTREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPV 185
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEV 265
+GIVD+N NP+ + Y +PGNDD A+ Y AIL GK+ Q ++ +E
Sbjct: 186 IGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQSQANAQAKGEEA 243
>gi|357031696|ref|ZP_09093639.1| 30S ribosomal protein S2 [Gluconobacter morbifer G707]
gi|356414926|gb|EHH68570.1| 30S ribosomal protein S2 [Gluconobacter morbifer G707]
Length = 273
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 100/226 (44%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + M PY++GVR I DL Q+ LL AL V G
Sbjct: 8 MRQLLEAGVHFGHHTRRWNPAMAPYLFGVRNQVHIIDLQQTVPLLDRALKVVRDTVANGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG + + + AQ C ++ W GM TN
Sbjct: 68 RVLFVGTKRAAAEHVAEAAQRCGQYYVNHRWLGGMLTNWKTITGSIKRLRQIDDMLAGGT 127
Query: 167 --------------SEKLFRAVTR------LPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL R++ LPDL+ + +T L A+ EA K+ IP
Sbjct: 128 AGLTKKEVLDITRDREKLERSLGGIKEMGGLPDLLFVIDTNKEKL----AVEEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
+G++DSN NP +TYP+PGNDD AI YC + A+L G A+
Sbjct: 184 VIGVLDSNSNPAGVTYPIPGNDDAIRAITLYCDLVAGAVLDGISAE 229
>gi|340029618|ref|ZP_08665681.1| 30S ribosomal protein S2 [Paracoccus sp. TRP]
Length = 259
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 99/226 (43%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM PYIYG R G I DL Q+ +L AL V + G
Sbjct: 8 MRQLLEAGVHYGHQTQRWNPRMAPYIYGDRNGIHIIDLTQTVPMLDAALQVVRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR------------ 176
VLFVG Q + + A+ ++ W G TN + + +++ R
Sbjct: 68 RVLFVGTKRQAQKAVAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSIQRLKALDETLSSGA 127
Query: 177 ------------------------------LPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
LPDL+ + + V + + AI EA K+ IP
Sbjct: 128 EGLTKKERLQMEREQAKLQASLGGIREMGGLPDLLFVID----VNKEDLAIAEAKKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V +VD+NC+P + Y +PGNDD AI YC + A L G A+
Sbjct: 184 VVAVVDTNCSPVGVDYIIPGNDDASRAIALYCDLVSRAALDGMTAQ 229
>gi|238898429|ref|YP_002924110.1| 30S ribosomal subunit protein S2 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
gi|259495217|sp|C4K5W9.1|RS2_HAMD5 RecName: Full=30S ribosomal protein S2
gi|229466188|gb|ACQ67962.1| 30S ribosomal subunit protein S2 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 241
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 109/223 (48%), Gaps = 41/223 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +++M +A VH GHK + +MKP+++G R G I +L+ + +L +AL+ + I+ R
Sbjct: 4 ISMREMLEAGVHFGHKTRYWNPKMKPFVFGSRNGIHIINLEFTVTMLNNALSELRKISAR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDC-QEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI--- 182
G +LFVG S I++ A +C Q F H R W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAIKEAAGNCAQFFVHHR-WLGGMLTNWKTVRQSIKRLKDLETQSQ 122
Query: 183 ---------------------LTNTLTT------------VLEPNP---AIGEAAKMCIP 206
L N+L V++ N A+ EA + IP
Sbjct: 123 DGTFEKLTKKEALMRTRELNKLENSLGGIKNMGGLPDALFVIDANHEHIAVKEANNLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ I + +PGNDD +I+ Y AI +G+
Sbjct: 183 VFSIVDTNSDPDGIDFIIPGNDDAIRSIKLYLNAVSAAISEGR 225
>gi|452850717|ref|YP_007492401.1| 30S ribosomal protein S2 [Desulfovibrio piezophilus]
gi|451894371|emb|CCH47250.1| 30S ribosomal protein S2 [Desulfovibrio piezophilus]
Length = 264
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 39/227 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K M + VH GH+ + +M+PYI+G R G I DL Q+ ++ A +F+ + +
Sbjct: 4 VTMKQMLETGVHFGHQTRRWNPKMRPYIFGARNGIHIMDLQQTVKMFATAHDFIVNTVAK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
G VLF+G Q + + A+ F T W G TN + + R++ RL +L +
Sbjct: 64 GGKVLFIGTKRQAQEAVTQEAERAGMFFVTHRWMGGTLTNFQTIKRSIDRLKNLEQMFED 123
Query: 187 LTT------------------------------------VLEPNP---AIGEAAKMCIPT 207
+ V++P AI E K+ IP
Sbjct: 124 GSISRYTKKEAVGMNREVKKLNLALGGIKDMHDAPKAAFVIDPKREHIAIQECRKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
V +VDSNC+P+++ Y +PGNDD AI+ + A ++G ++D
Sbjct: 184 VAVVDSNCDPDMVDYIIPGNDDAIRAIKLFATHMADACIEGSAMQKD 230
>gi|386390372|ref|ZP_10075161.1| ribosomal protein S2 [Haemophilus paraphrohaemolyticus HK411]
gi|387772560|ref|ZP_10128479.1| ribosomal protein S2 [Haemophilus parahaemolyticus HK385]
gi|385693097|gb|EIG23752.1| ribosomal protein S2 [Haemophilus paraphrohaemolyticus HK411]
gi|386906281|gb|EIJ71019.1| ribosomal protein S2 [Haemophilus parahaemolyticus HK385]
Length = 238
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM +A VH GH+ + +MKP+I+G R G I +L+++ L +AL + IA
Sbjct: 4 VSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHIVNLEKTLPLFNEALAELTRIASN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
+G VLFVG S ++ A DCQ+F W GM TN + + +++ RL DL T
Sbjct: 64 NGKVLFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQTQD 123
Query: 186 -----------------------TLTTVLEPNP---------------AIGEAAKMCIPT 207
+L + N AI EA + IP
Sbjct: 124 GTFDKITKKEALMRTRELEKLELSLGGIKNMNGLPDAIFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N P+ + Y +PGNDD AIQ Y AI +GK
Sbjct: 184 FAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDSAVAAIKEGK 225
>gi|304439989|ref|ZP_07399882.1| 30S ribosomal protein S2 [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371481|gb|EFM25094.1| 30S ribosomal protein S2 [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 251
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 39/230 (16%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +M +I+ R G I DL ++ + + +A +FV +A
Sbjct: 2 SVISMKALLEAGVHFGHQTRRWNPKMSRFIFTERNGIYIIDLQKTVKKIEEAYDFVRELA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
+ +LFVG Q IEK A+ C+ + W G+ TN + + + V RL +L +
Sbjct: 62 EENKTILFVGTKKQAQDAIEKEARRCEMPFINQRWLGGLLTNFKTIKKRVERLHNLEEME 121
Query: 185 NTLT------------------------------------TVLEPNP---AIGEAAKMCI 205
T V++P A+ EA + I
Sbjct: 122 EDGTFDVLPKKEVIKLKLERERLEKFLGGIKHMDRLPDCIFVVDPKKEYIAVKEADILGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
P VGI+D+NC+P+ I YP+PGNDD A++ + A+L+GK+ Q T
Sbjct: 182 PVVGIIDTNCDPDEIDYPIPGNDDAIRAVKLITETIANAVLEGKQGTQFT 231
>gi|170287970|ref|YP_001738208.1| 30S ribosomal protein S2 [Thermotoga sp. RQ2]
gi|170175473|gb|ACB08525.1| ribosomal protein S2 [Thermotoga sp. RQ2]
Length = 262
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 39/225 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M PYIY R+G I DL ++ +LL +A FV A
Sbjct: 3 VVTMKQLLEAGVHFGHRTRRWNPKMAPYIYTERKGIYIIDLQKTQQLLEEAYYFVREKAS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
+LFVG Q +I+ A+ C F W G+ TN + + + +L +L +
Sbjct: 63 EGATILFVGTKKQAQGVIKAEAERCGAFYVNNRWLGGLLTNFKTIRSRIEKLIELEEMEQ 122
Query: 186 T------------------------------------LTTVLEPNP---AIGEAAKMCIP 206
+ + +++P A+ EA K+ IP
Sbjct: 123 SGKLDELPKKEQSRIRRILEKLRKNLGGLKEMRKIPDIIYIVDPRKEKIAVAEANKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V IVD+NC+P+ I Y +PGNDD +I+ V A L+G++
Sbjct: 183 IVAIVDTNCDPDPIDYVIPGNDDAIRSIKLITSVIANAYLEGREG 227
>gi|255321104|ref|ZP_05362271.1| ribosomal protein S2 [Acinetobacter radioresistens SK82]
gi|255301843|gb|EET81093.1| ribosomal protein S2 [Acinetobacter radioresistens SK82]
Length = 272
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 112/257 (43%), Gaps = 48/257 (18%)
Query: 52 PNPLRYHDYFQVRNL----VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLD 107
PNP F+V+ + V ++D+ A H GH+ + +M+ YI+G R I +L+
Sbjct: 16 PNP-----NFKVKKMADYNVSMRDLLTAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLE 70
Query: 108 QSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS 167
+ L DALNF +A + VLFVG S +I + AQ + W GM TN
Sbjct: 71 HTVPALNDALNFANQLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNW 130
Query: 168 EKLFRAVTRLPDLVILTN-------TLTTVLE---------------------PNP---- 195
+ L +++ RL DL + T LE P+
Sbjct: 131 KTLRQSINRLKDLQTQSQDGTFAKLTKREALERAREMEKLERSLGGVKNMGGLPDALFVI 190
Query: 196 -------AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
AI EA + IP +GIVD+N NP+ + Y +PGNDD A+ Y AI+ G
Sbjct: 191 DVDHEAIAIKEAKNLGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAIIAG 250
Query: 249 KKAKQDTLKLLSEKQEV 265
K+ Q ++ +E
Sbjct: 251 KEYAQSQANAQAKAEEA 267
>gi|326403885|ref|YP_004283967.1| 30S ribosomal protein S2 [Acidiphilium multivorum AIU301]
gi|338983221|ref|ZP_08632441.1| RpsB [Acidiphilium sp. PM]
gi|325050747|dbj|BAJ81085.1| 30S ribosomal protein S2 [Acidiphilium multivorum AIU301]
gi|338207855|gb|EGO95772.1| RpsB [Acidiphilium sp. PM]
Length = 256
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 102/228 (44%), Gaps = 46/228 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ + +A VH GH + RM P+++GVR I DL Q+ +L AL + ++
Sbjct: 6 VSLRQLLEAGVHFGHNTRRWNPRMAPFLFGVRNQVHIIDLQQTVPMLERALREIRNVTAG 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
G VLFVG + + A+ C ++ W GM TN
Sbjct: 66 GGRVLFVGTKRAAAEHVADAAKRCGQYYVNHRWLGGMLTNWKTITNSIRKLRQMEETLAG 125
Query: 167 ----------------SEKLFRAVTR------LPDLVILTNTLTTVLEPNPAIGEAAKMC 204
+KL RA+ LPD++ + +T L A+ EA K+
Sbjct: 126 DGQGLTKKEMLNLMRERDKLDRALGGIKEMGGLPDILFIIDTNKEKL----AVEEANKLG 181
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
IP V ++DSN NP +TYP+PGNDD AI YC + A+L G A+
Sbjct: 182 IPVVAVLDSNSNPEGVTYPIPGNDDAIRAITLYCDLVANAVLDGISAE 229
>gi|359437239|ref|ZP_09227309.1| small subunit ribosomal protein S2 [Pseudoalteromonas sp. BSi20311]
gi|392554176|ref|ZP_10301313.1| 30S ribosomal protein S2 [Pseudoalteromonas undina NCIMB 2128]
gi|358028063|dbj|GAA63558.1| small subunit ribosomal protein S2 [Pseudoalteromonas sp. BSi20311]
Length = 242
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 104/224 (46%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+Q+ + AL F++ A
Sbjct: 4 VSMRDMLQAGVHFGHQARYWNPKMKPFIFGARNRVHIINLEQTVPMFNTALKFLSGAAAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG S +++ A +F W GM TN + + +++ RL DL
Sbjct: 64 KGKVLFVGTKRAASEAVKEAALQSDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQD 123
Query: 181 -----------VILTNTLTTVLE-----------PNP-----------AIGEAAKMCIPT 207
++LT + + + P+ AI EA + IP
Sbjct: 124 GTFEKLTKKEALMLTREMEKLEKSLGGIKNMGGLPDAIFVIDADHEHIAIREANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V IVD+N NP+ + Y VPGNDD AI Y AI +G+++
Sbjct: 184 VAIVDTNSNPDGVDYIVPGNDDAIRAINLYTSAVAAAITEGRES 227
>gi|16126166|ref|NP_420730.1| 30S ribosomal protein S2 [Caulobacter crescentus CB15]
gi|221234937|ref|YP_002517373.1| 30S ribosomal protein S2 [Caulobacter crescentus NA1000]
gi|25009221|sp|Q9A703.1|RS2_CAUCR RecName: Full=30S ribosomal protein S2
gi|254764465|sp|B8GWS3.1|RS2_CAUCN RecName: Full=30S ribosomal protein S2
gi|13423378|gb|AAK23898.1| ribosomal protein S2 [Caulobacter crescentus CB15]
gi|220964109|gb|ACL95465.1| SSU ribosomal protein S2P [Caulobacter crescentus NA1000]
Length = 268
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 97/220 (44%), Gaps = 46/220 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A H GH+ + +M YI+G R I DL QS LL AL V +A G
Sbjct: 8 MRQLLEAGAHFGHQTHRWNPKMDRYIFGSRSNIHIIDLSQSIPLLHQALVKVREVAAAGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q S + A+ C ++ W G TN + ++ RL
Sbjct: 68 RVLFVGTKRQASDPVATAAKRCAQYYVNHRWLGGTLTNWRTVSGSIARLRELEGVLAGEG 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PD++ + +T + AI EA K+ IP
Sbjct: 128 QGRSKKELLQLTRERDKLELSLGGIKDMGGIPDIMFVIDTNKEAI----AILEARKLNIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAIL 246
V I+D+NC+P+ ITYP+PGNDD A+Q YC + A+L
Sbjct: 184 VVAILDTNCDPDGITYPIPGNDDAARALQLYCDLIADAVL 223
>gi|118603032|ref|YP_904247.1| SSU ribosomal protein S2P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|166226750|sp|A1AXW9.1|RS2_RUTMC RecName: Full=30S ribosomal protein S2
gi|118567971|gb|ABL02776.1| SSU ribosomal protein S2P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 312
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 102/227 (44%), Gaps = 38/227 (16%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K M +A VH GH+ +M +IYG R G I +L+++ L DALNF + I
Sbjct: 6 MKKMLEAGVHFGHRSRFWSPKMGRFIYGTRNGVHIINLEKTLPLFNDALNFASKITAVGR 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN--- 185
+LFVG S +I++ A C W GM TN + + ++ RL DL L
Sbjct: 66 SILFVGTKRAASNIIKQEAMRCGMPYVNHRWLGGMMTNYKTIKVSIKRLKDLEFLAEENF 125
Query: 186 ---------TLTTVLEP--------------------------NPAIGEAAKMCIPTVGI 210
+T +E A+ EA K+ +P +GI
Sbjct: 126 NQFGKKEALMMTREMEKLERSLGGIKDLNDIPDVIFVIDIGVEKNAVAEAKKLHLPIIGI 185
Query: 211 VDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLK 257
VD+N +P I Y +PGNDD+ AI YY + AIL+ K A +++
Sbjct: 186 VDTNHSPEGIDYVIPGNDDSIRAIGYYAREIANAILEAKAATSTSIE 232
>gi|165939849|ref|ZP_02228389.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str. IP275]
gi|167399959|ref|ZP_02305477.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|270487340|ref|ZP_06204414.1| ribosomal protein S2 [Yersinia pestis KIM D27]
gi|21960060|gb|AAM86687.1|AE013914_7 30S ribosomal subunit protein S2 [Yersinia pestis KIM10+]
gi|45437440|gb|AAS62991.1| 30S ribosomal protein S2 [Yersinia pestis biovar Microtus str.
91001]
gi|165912252|gb|EDR30889.1| ribosomal protein S2 [Yersinia pestis biovar Orientalis str. IP275]
gi|167050667|gb|EDR62075.1| ribosomal protein S2 [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|270335844|gb|EFA46621.1| ribosomal protein S2 [Yersinia pestis KIM D27]
Length = 269
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL + I+ R
Sbjct: 32 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKISSR 91
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A +C +F W GM TN + + +++ RL DL I
Sbjct: 92 KGKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 151
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 152 GTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPV 211
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A++ Y TA+ +G+
Sbjct: 212 FSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLGAVATAVREGR 253
>gi|225677377|ref|ZP_03788347.1| ribosomal protein S2 [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225590585|gb|EEH11842.1| ribosomal protein S2 [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 282
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 48/226 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQI--IFDLDQSAELLRDALNFVAHIA 124
V V+D+ ++ VH GHKI + +M PYIYGV Q I DL ++ LL+ A+ + +
Sbjct: 7 VTVRDLAESGVHFGHKISRWNAKMAPYIYGVHQENRIHIIDLRKTLPLLQVAMKALYDVV 66
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS-------------EKLF 171
++ G +LFVG Q +I A C ++ W GM TN EK+
Sbjct: 67 FQGGRILFVGTKFQAFDIIASEAIRCGQYYVNHRWLGGMLTNWGTVSSSIKTLMQYEKIL 126
Query: 172 -----------------------------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
R + +PD++ + +T + + A+ EA K
Sbjct: 127 NDEDSILTKKELGNIEKKKQKLDKALGGIREMGAIPDILFIIDT----NKEHIAVKEAKK 182
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ IP V I+D+N +P+ ITY +PGNDD+ +I+ YC++ +IL G
Sbjct: 183 LGIPIVAILDTNSDPDGITYLIPGNDDSRKSIELYCKLATDSILAG 228
>gi|145638266|ref|ZP_01793876.1| 30S ribosomal protein S2 [Haemophilus influenzae PittII]
gi|145272595|gb|EDK12502.1| 30S ribosomal protein S2 [Haemophilus influenzae PittII]
Length = 240
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 108/237 (45%), Gaps = 39/237 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM +A VH GH+ + +MKP+I+G R G I +L+++ L +AL + IA
Sbjct: 4 VSMRDMINAGVHFGHQTRYWNPQMKPFIFGARNGVHIINLEKTLPLFNEALAELTRIASN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
+G VLFVG S ++ A DCQ++ W GM TN + + +++ RL DL
Sbjct: 64 NGKVLFVGTKRAASEAVQVAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 181 ----------VILTNTLTTVLE------------PNP-----------AIGEAAKMCIPT 207
++ + LE P+ A+ EA + IP
Sbjct: 124 GTFDKLTKKEALMRSREMEKLELSLGGIKDMGGLPDALFVIGADHEHIAVKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQE 264
IVD+N P + + +PGNDD AIQ Y A+ +G+ + + L+ E
Sbjct: 184 FAIVDTNSTPAGVDFVIPGNDDATRAIQLYVSAAAAAVKEGRGNEAQVAEELAADAE 240
>gi|206900304|ref|YP_002250927.1| 30S ribosomal protein S2 [Dictyoglomus thermophilum H-6-12]
gi|238058193|sp|B5YEG9.1|RS2_DICT6 RecName: Full=30S ribosomal protein S2
gi|206739407|gb|ACI18465.1| ribosomal protein S2 [Dictyoglomus thermophilum H-6-12]
Length = 246
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 105/241 (43%), Gaps = 47/241 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K + +A VH GH+ +MK YI+ R G I DL ++ L +A F A
Sbjct: 6 MKQLLEAGVHFGHQTKRWCPKMKEYIFSERNGIHIIDLQKTLVKLEEAYEFAKEQAKEGK 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS--------------------- 167
LFVG Q IE+ A+ C F + W GM TN
Sbjct: 66 TFLFVGTKKQAQQTIEEEAKRCGAFYVNQRWLGGMLTNFTTIKSRIDYMVKLEELKNNGY 125
Query: 168 ----------------EKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
EKL R + +LPD++ + + + A+ EA K+ I
Sbjct: 126 FEKLPKKQANRLNRELEKLVKVFDGLRGIEKLPDVLYIVDPKREEI----AVKEANKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEV 265
P + IVD+NC+P LITYP+PGNDD +I+ AIL+GK ++ L + +++
Sbjct: 182 PIIAIVDTNCDPELITYPIPGNDDAIRSIKLITSKIADAILEGKDLREKEADLQLKDEDL 241
Query: 266 Q 266
Q
Sbjct: 242 Q 242
>gi|30249680|ref|NP_841750.1| 30S ribosomal protein S2 [Nitrosomonas europaea ATCC 19718]
gi|61215747|sp|Q82TZ6.1|RS2_NITEU RecName: Full=30S ribosomal protein S2
gi|30180717|emb|CAD85629.1| Ribosomal protein S2 [Nitrosomonas europaea ATCC 19718]
Length = 251
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 40/239 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+ + +LR+AL++ +
Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPYIFGQRNKIHIVNLEHTLVMLREALDYARRLTAN 62
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPD------- 179
G +LFVG Q ++ + A C + W GM TN + + +++ RL D
Sbjct: 63 KGTILFVGTKRQARDIVMEEAIRCGAPYVNQRWLGGMLTNFKTIRQSIKRLQDMEKMVQD 122
Query: 180 -----------------LVILTNTLTTVLE---------------PNPAIGEAAKMCIPT 207
L L N+L + E AI EA K+ IP
Sbjct: 123 GTLNKLTKKEALDFQRELEKLNNSLGGIKEMKGLPDAMFVIDVGYQKGAIVEADKLGIPV 182
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK-KAKQDTLKLLSEKQEV 265
VG+VD+N +P + Y VPGNDD+ AI+ Y + AIL+G+ ++ Q+ +++ E+
Sbjct: 183 VGVVDTNHSPAGVRYVVPGNDDSSQAIRLYARAMADAILEGRNQSVQEIIEMSKSDDEI 241
>gi|331268166|ref|YP_004347815.1| ribosomal protein S2 [Chlorella variabilis]
gi|325296343|gb|ADZ05063.1| ribosomal protein S2 [Chlorella variabilis]
Length = 264
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 102/227 (44%), Gaps = 47/227 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
VK++DM + +H GH + RM PYIYG R G+ I DL Q+ LL L F+ A +
Sbjct: 5 VKLEDMIQSGMHFGHSTREWNPRMAPYIYGERNGRHILDLVQTYYLLNKVLAFLEDQAAQ 64
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS------------------- 167
LFVG Q + LI KTA C+ + + W GM TN
Sbjct: 65 GKTFLFVGTKQQAAPLIAKTALACESYYVNQRWLGGMLTNWRTIQKSLRKLQEYRQAEER 124
Query: 168 ---------------------EKLFRAV---TRLPDLVILTNTLTTVLEPNPAIGEAAKM 203
EK V +RLP +VI+ + A+ E ++
Sbjct: 125 GDWNLLKKQEIARKRREKDRLEKYLSGVENMSRLPGVVIIIGQTEEI----HAVKECRQL 180
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
IPT+ ++DSNC+P L + +P NDD+ SA++ F+ A+ G++
Sbjct: 181 GIPTLTLLDSNCDPGLADWFLPANDDSVSALRLVLGWFQQAVQTGQR 227
>gi|317153884|ref|YP_004121932.1| 30S ribosomal protein S2 [Desulfovibrio aespoeensis Aspo-2]
gi|316944135|gb|ADU63186.1| ribosomal protein S2 [Desulfovibrio aespoeensis Aspo-2]
Length = 263
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 39/227 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K M + VH GH+ + +M+P+I+G R G I DL Q+ ++ A +F+ + A +
Sbjct: 4 VTMKQMLETGVHFGHQTRRWNPKMRPFIFGARNGIHIMDLQQTVKMFATAHDFIVNTAAK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
G VLF+G Q + + AQ F T W G TN + + +++ RL L +
Sbjct: 64 GGKVLFIGTKRQAQEAVTQEAQRAGMFYVTHRWMGGTLTNFQTIKKSIDRLKTLEQMFED 123
Query: 187 LTT------------------------------------VLEPNP---AIGEAAKMCIPT 207
+ V++P AI E K+ IP
Sbjct: 124 GSISRYTKKEAVGMNREVKKLNLALGGIKDMNDAPKAAFVIDPKREHIAIMECRKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
V +VDSNC+P+++ Y +PGNDD AI+ + A L+G ++D
Sbjct: 184 VAVVDSNCDPDMVDYIIPGNDDAIRAIKLFAAHMADACLEGAAMQKD 230
>gi|148260691|ref|YP_001234818.1| 30S ribosomal protein S2 [Acidiphilium cryptum JF-5]
gi|166225232|sp|A5FZ67.1|RS2_ACICJ RecName: Full=30S ribosomal protein S2
gi|146402372|gb|ABQ30899.1| SSU ribosomal protein S2P [Acidiphilium cryptum JF-5]
Length = 256
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 102/228 (44%), Gaps = 46/228 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ + +A VH GH + RM P+++GVR I DL Q+ +L AL + ++
Sbjct: 6 VSLRQLLEAGVHFGHNTRRWNPRMAPFLFGVRNQVHIIDLQQTVPMLERALREIRNVTAG 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
G VLFVG + + A+ C ++ W GM TN
Sbjct: 66 GGRVLFVGTKRAAAEHVAYAAKRCGQYYVNHRWLGGMLTNWKTITNSIRKLRQMEETLAG 125
Query: 167 ----------------SEKLFRAVTR------LPDLVILTNTLTTVLEPNPAIGEAAKMC 204
+KL RA+ LPD++ + +T L A+ EA K+
Sbjct: 126 DGQGLTKKEMLNLMRERDKLDRALGGIKEMGGLPDILFIIDTNKEKL----AVEEANKLG 181
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
IP V ++DSN NP +TYP+PGNDD AI YC + A+L G A+
Sbjct: 182 IPVVAVLDSNSNPEGVTYPIPGNDDAIRAITLYCDLVANAVLDGISAE 229
>gi|326803587|ref|YP_004321405.1| 30S ribosomal protein S2 [Aerococcus urinae ACS-120-V-Col10a]
gi|326650183|gb|AEA00366.1| ribosomal protein S2 [Aerococcus urinae ACS-120-V-Col10a]
Length = 261
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 39/227 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K + +A VH GH+ + +M YI+ R G I DL Q+ +LL A N V IA
Sbjct: 4 VTMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQQTVKLLDKAYNVVRDIAAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G +LFVG Q IE+ A C ++ W G+ TN + + +++ R+ D+
Sbjct: 64 GGNILFVGTKKQAQQAIEEEALRCGQYYVNHRWLGGLLTNWDTIQKSIQRMRDIDRMEED 123
Query: 181 ------------------VILTNTLTT------------VLEPNP---AIGEAAKMCIPT 207
L N L V++P A+ EA K+ IP
Sbjct: 124 GTFDVLPKKEVSELNKEREKLENNLGGMADMPSLPDAIFVVDPRKEEIAVNEAKKLNIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
+ +VD+NC+P+ I Y +P NDD AI+ A+L+G + + D
Sbjct: 184 IAMVDTNCDPDDIDYVIPSNDDAIRAIRLIASTLADAVLEGNQGEDD 230
>gi|116749213|ref|YP_845900.1| 30S ribosomal protein S2 [Syntrophobacter fumaroxidans MPOB]
gi|166226763|sp|A0LJ63.1|RS2_SYNFM RecName: Full=30S ribosomal protein S2
gi|116698277|gb|ABK17465.1| SSU ribosomal protein S2P [Syntrophobacter fumaroxidans MPOB]
Length = 274
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 100/229 (43%), Gaps = 39/229 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +MK YI+G R G I DL ++ L A FV
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMKTYIFGARNGIYIIDLQRTVRLFHTAYQFVTQTVG 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
VLFVG Q I + AQ C + + W GM TN
Sbjct: 63 SGEHVLFVGTKQQARDTIAEEAQRCGMYYINQRWLGGMLTNFKTIKLRVDRLKELDAMVE 122
Query: 167 ------------------SEKLFRAVTRLPDLVILTNTLTTV--LEPNPAIGEAAKMCIP 206
EKL + + + ++ L L V N A+ EA ++ IP
Sbjct: 123 DGSINRFPKKEILQLMGEREKLEKNLGGIKNMARLPGALYVVDTQRENIAVLEANRLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V IVD+NC+P+LI YP+PGNDD AI+ A +G++ ++T
Sbjct: 183 VVAIVDTNCDPDLINYPIPGNDDAIRAIRLITSKVADACAEGRRRLEET 231
>gi|379011795|ref|YP_005269607.1| 30S ribosomal protein S2 [Acetobacterium woodii DSM 1030]
gi|375302584|gb|AFA48718.1| 30S ribosomal protein S2 [Acetobacterium woodii DSM 1030]
Length = 259
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 99/226 (43%), Gaps = 39/226 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K + +A VH GH+ + +M PYI+ R G I DL Q+ + + A +FV ++
Sbjct: 4 VSMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQQTVKRIEKAYSFVKELSEN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
+LFVG Q IE+ A+ + W G TN + + + RL +L +
Sbjct: 64 GEEILFVGTKKQAQTSIEREAKRSGSYCVNHRWLGGTLTNFGTISKRIDRLNELEQMEED 123
Query: 187 LTTVLEPNP---------------------------------------AIGEAAKMCIPT 207
T L P AI EA K+ IP
Sbjct: 124 GTFALLPKKEVIKLKRQREKLQKFLGGIKDMKGVPGAIFVIDTKKERIAIAEAKKLGIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+GIVD+NC+P+ I Y +PGNDD A+ V AI++G++ +Q
Sbjct: 184 IGIVDTNCDPDEIDYIIPGNDDAIRAVALILSVISDAIIEGRQGEQ 229
>gi|88798258|ref|ZP_01113844.1| ribosomal protein S2 [Reinekea blandensis MED297]
gi|88779034|gb|EAR10223.1| ribosomal protein S2 [Reinekea sp. MED297]
Length = 241
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 105/227 (46%), Gaps = 43/227 (18%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++D+ A VH GH+ + +M YI+G R I +L+ + L DAL+FV +A +
Sbjct: 1 MRDLLKAGVHFGHQTRYWNPKMSQYIFGARNKIHIINLEHTVPALNDALSFVGSLAAKKN 60
Query: 129 IVLFVG--QSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
+LFVG +SA N + E T AH W GM TN + + +++ RL +L
Sbjct: 61 KILFVGTKRSASNIIREEATRAGMPYVAHR--WLGGMLTNYKTIRQSIKRLRELQTQQDD 118
Query: 183 -----------LTNT------------------------LTTVLEPNPAIGEAAKMCIPT 207
L NT + V AI EA K+ IP
Sbjct: 119 GTFEQLTKKERLMNTREIAKLEKSIGGIKDMGGLPDALFVIDVDHERIAIQEANKLGIPV 178
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
+G+VD+N NP+ I Y +PGNDD AI+ Y Q A+L+ K A+ D
Sbjct: 179 IGVVDTNSNPDGIDYVIPGNDDAIRAIEIYAQAMADAVLEAKTAEVD 225
>gi|11465715|ref|NP_053859.1| ribosomal protein S2 [Porphyra purpurea]
gi|1710703|sp|P51249.1|RR2_PORPU RecName: Full=30S ribosomal protein S2, chloroplastic
gi|1276715|gb|AAC08135.1| 30S ribosomal protein S2 (chloroplast) [Porphyra purpurea]
Length = 241
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 111/242 (45%), Gaps = 47/242 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V + ++ +A VH GH+ + +M PYIY R G I DL Q+++LL +A FV +
Sbjct: 3 IVTLAELLEAGVHFGHQARRWNPKMFPYIYTERNGIHIIDLVQTSQLLTEACEFVKQASS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS------------------ 167
VLF+G Q + +I + AQ C + + W GM TN
Sbjct: 63 DGRKVLFLGTKRQAAGIIAQEAQRCDSYYVNQRWLGGMLTNWVTIKSRVTRLRQLEEQDS 122
Query: 168 -------------------EKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
+KL + +TRLPD+V++ + AI E K
Sbjct: 123 SGLIDQLPKKEAAVLRRELDKLRKHLNGIKNMTRLPDIVVVVDQ----KRETTAIQECLK 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+ IPT+ I+D+NC+P +I P+P NDD +I+ AI +GK + + +L+S
Sbjct: 179 LGIPTICILDTNCSPEIINIPIPANDDAIRSIKLIIGKIADAIYEGKYGQMEPTELISSA 238
Query: 263 QE 264
++
Sbjct: 239 ED 240
>gi|383788465|ref|YP_005473034.1| 30S ribosomal protein S2 [Caldisericum exile AZM16c01]
gi|381364102|dbj|BAL80931.1| 30S ribosomal protein S2 [Caldisericum exile AZM16c01]
Length = 258
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 39/227 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+V +K++ +A VH GH+ D RMK +I+ R G IFDL + + + +A NFV I
Sbjct: 2 GVVSMKELLEAGVHFGHQTKRWDPRMKEFIFTERNGIHIFDLRLTVQKIEEAYNFVVDIT 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
+ G ++FVG ++++ A+ C W G+ TN + + +++ RL +L L
Sbjct: 62 KQGGKIIFVGTKKAAQDIVKEEAERCGMPYVNERWVGGLLTNFQTVRKSINRLKELEKLE 121
Query: 185 NT---------------------------------------LTTVLEPNPAIGEAAKMCI 205
+T + AI EA K+ I
Sbjct: 122 TEGYFDTISVKERVKLERELAKLRKLYGGLKDMITLPWAIFVTDTHKERSAILEARKIKI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
P +GI D+N NP I YP+PGNDD +++ + A+++G++ K
Sbjct: 182 PIIGICDTNSNPEEIDYPIPGNDDAIRSLRLITSIIANAVIEGREGK 228
>gi|313113598|ref|ZP_07799186.1| ribosomal protein S2 [Faecalibacterium cf. prausnitzii KLE1255]
gi|310624113|gb|EFQ07480.1| ribosomal protein S2 [Faecalibacterium cf. prausnitzii KLE1255]
Length = 240
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 97/228 (42%), Gaps = 39/228 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M YI+ R G I DL ++ + L +A N+V +A
Sbjct: 3 VVSMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKLDEAYNYVKEVAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G +LFVG Q I A C W GM TN + + + R+ L +
Sbjct: 63 EGGDILFVGTKKQAQESIRDEALRCGMHYVNARWLGGMLTNFRTIRKRIDRMDQLAKMKE 122
Query: 186 TLTTVLEPNP---------------------------------------AIGEAAKMCIP 206
T L P A+ EA K+ IP
Sbjct: 123 NGTFELLPKKEVAKLELEMEKLDKYLGGVKNMKTLPKAMFIVDPHKERIAVAEARKLNIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
V IVD+NCNP+ I Y +PGNDD A++ A+L+GK+ Q+
Sbjct: 183 IVAIVDTNCNPDEIDYVIPGNDDAIRAVKLIAGAMADAVLEGKQGNQE 230
>gi|354581546|ref|ZP_09000450.1| ribosomal protein S2 [Paenibacillus lactis 154]
gi|353201874|gb|EHB67327.1| ribosomal protein S2 [Paenibacillus lactis 154]
Length = 232
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 39/229 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M YI+ R G I DL ++ + + +A NFV IA
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMDKYIFTERNGIYIIDLQKTVKKVEEAFNFVKSIAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
+G +LFVG Q +++ A+ C + + W G TN E + + + RL L
Sbjct: 63 ENGTILFVGTKKQAQDSVKEEAERCGMYYINQRWLGGTLTNFETIQKRINRLKQLESWEE 122
Query: 181 -----------VILTN--------------------TLTTVLEPNP---AIGEAAKMCIP 206
VIL + V++P A+ EA K+ IP
Sbjct: 123 DGTFQVLPKKEVILLRKEKDRLEKFLGGIKNMKGLPSALFVIDPRKERIAVAEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
VGIVD+NC+P+ I Y +PGNDD A++ A+++ + ++ T
Sbjct: 183 IVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVVEAHQGEETT 231
>gi|121533730|ref|ZP_01665557.1| ribosomal protein S2 [Thermosinus carboxydivorans Nor1]
gi|121307721|gb|EAX48636.1| ribosomal protein S2 [Thermosinus carboxydivorans Nor1]
Length = 234
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 108/228 (47%), Gaps = 39/228 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +M PYI+ R G I DL ++ + + +A NF+ +A
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEEAYNFIRDVA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
+ +LFVG Q +++ A C F W GM TN + + + + RL +L
Sbjct: 62 AQGQSILFVGTKKQAQEAVKEEATRCDMFYVNERWLGGMLTNFQTIQKRINRLRELEDME 121
Query: 181 -------------VILTNTLTT-------------------VLEPNP---AIGEAAKMCI 205
+ L + + +++P A+ EA K+ I
Sbjct: 122 EKGVFDVLPKKEVMALRHEMERLQKFLGGIKNMNKLPGALFIIDPRKERIAVAEARKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P V IVD+NC+P+ + Y +PGNDD A++ A+L+G++ +Q
Sbjct: 182 PIVAIVDTNCDPDEVDYVIPGNDDAIRAVKLLTSKMADAVLEGRQGEQ 229
>gi|251797411|ref|YP_003012142.1| 30S ribosomal protein S2 [Paenibacillus sp. JDR-2]
gi|247545037|gb|ACT02056.1| ribosomal protein S2 [Paenibacillus sp. JDR-2]
Length = 232
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 39/229 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M YI+ R G I DL ++ + + +A NFV +A
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVEEAYNFVRSVAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
G +LFVG Q +++ A+ C F + W G TN + + + + RL L
Sbjct: 63 EGGTMLFVGTKKQAQDSVKEEAERCGNFYINQRWLGGTLTNFQTIQKRIDRLRQLEKWSE 122
Query: 181 -----------VILTNTLTTVLEP------------------NP-----AIGEAAKMCIP 206
VI+ N LE +P A+ EA K+ IP
Sbjct: 123 DGTFEVLPKKEVIILNKEKDRLEKFLGGIKGMKGLPSALFIIDPRKERIAVAEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
VGIVD+NC+P+ I Y +PGNDD A++ AI++ + +Q T
Sbjct: 183 IVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTSKMADAIVEANQGEQTT 231
>gi|299144036|ref|ZP_07037116.1| ribosomal protein S2 [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518521|gb|EFI42260.1| ribosomal protein S2 [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 249
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 41/237 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K++ +A VH GH+ + +M +I+ R G I DL ++ + + +A F+ ++ G
Sbjct: 1 MKNLLEAGVHFGHQTRRWNPKMSRFIFTQRNGIYIIDLQKTVKKVDEAYEFIRELSSEGG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLT 188
+LFVG Q +EK A+ C+ + W G+ TN + + + + RL +L + T
Sbjct: 61 KILFVGTKKQAQDAVEKEAKKCEMPFINQRWLGGLLTNYKTIRKRIDRLQELTEMETDGT 120
Query: 189 TVLEPNP---------------------------------------AIGEAAKMCIPTVG 209
+ P A+ EA + IP VG
Sbjct: 121 FDVLPKKEVIQLRHERERLEKFLGGIKDMDRVPDALFIVDPRKERIAVKEAHILGIPVVG 180
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEVQ 266
IVD+NC+P+ I +P+PGNDD A++ + A+L+GK+ Q ++ SE +EV+
Sbjct: 181 IVDTNCDPDEIDFPIPGNDDAIRAVKLITETISNAVLEGKQGAQ--IQDYSENEEVK 235
>gi|315127165|ref|YP_004069168.1| 30S ribosomal protein S2 [Pseudoalteromonas sp. SM9913]
gi|315015679|gb|ADT69017.1| 30S ribosomal subunit protein S2 [Pseudoalteromonas sp. SM9913]
Length = 242
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 104/224 (46%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+Q+ + AL F++ A
Sbjct: 4 VSMRDMLQAGVHFGHQARYWNPKMKPFIFGARNRVHIINLEQTVPMFNTALKFLSGAAAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG S +++ A +F W GM TN + + +++ RL DL
Sbjct: 64 KGKVLFVGTKRAASEAVKEAALQSDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQD 123
Query: 181 -----------VILTNTLTTVLE-----------PNP-----------AIGEAAKMCIPT 207
++LT + + + P+ AI EA + IP
Sbjct: 124 GTFEKLTKKEALMLTREMDKLEKSLGGIKNMGGLPDAIFVIDADHEHIAIREANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V IVD+N NP+ + Y VPGNDD AI Y AI +G+++
Sbjct: 184 VAIVDTNSNPDGVDYIVPGNDDAIRAINLYTSAVAAAITEGRES 227
>gi|126737740|ref|ZP_01753470.1| 30S ribosomal protein S2 [Roseobacter sp. SK209-2-6]
gi|126721133|gb|EBA17837.1| 30S ribosomal protein S2 [Roseobacter sp. SK209-2-6]
Length = 255
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 98/226 (43%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM YIYG R G I DL Q+ +L AL V + G
Sbjct: 8 LRQLLEAGVHFGHQTQRWNPRMSTYIYGARNGIHIMDLTQTVPMLDQALQIVRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
+LFVG Q + I + A+ ++ W G TN + + +++ RL
Sbjct: 68 RILFVGTKRQAAGPIAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSINRLKEIDEKMESGA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + L AI EA K+ IP
Sbjct: 128 EGLTKKERLGMERDQQKLQASLGGIREMGGVPDLLFVIDVKKEAL----AIAEAKKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V +VD+NC+P+ + + +PGNDD AI YC + A L G A+
Sbjct: 184 VVAVVDTNCSPDGVDFVIPGNDDASRAISLYCDLVARAALDGMTAQ 229
>gi|71282500|ref|YP_268295.1| 30S ribosomal protein S2 [Colwellia psychrerythraea 34H]
gi|123733781|sp|Q485H0.1|RS2_COLP3 RecName: Full=30S ribosomal protein S2
gi|71148240|gb|AAZ28713.1| ribosomal protein S2 [Colwellia psychrerythraea 34H]
Length = 242
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 101/223 (45%), Gaps = 39/223 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GHK + +MK +I+G R I +L+Q+ + +AL FV +++ +
Sbjct: 4 VSMRDMLKAGVHFGHKTRYWNPKMKQFIFGARDKVHIINLEQTVPMFNEALAFVNNVSSK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG S I+ A +F W GM TN + + +++ RL DL
Sbjct: 64 KGKVLFVGTKRAASDAIKDAAIKSDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLESQSTD 123
Query: 181 ---------------------------VILTNTLTTVL------EPNPAIGEAAKMCIPT 207
+ L VL + AI EA + IP
Sbjct: 124 GTFEALTKKEALMRTREMEKLDKSLGGIKNMGGLPDVLFIIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
+ +VD+N NP+ + Y VPGNDD A+ YC ++L G++
Sbjct: 184 ISVVDTNSNPDGVDYVVPGNDDAIRAVTLYCDAVANSVLSGRE 226
>gi|260654915|ref|ZP_05860403.1| ribosomal protein S2 [Jonquetella anthropi E3_33 E1]
gi|424844781|ref|ZP_18269392.1| ribosomal protein S2 [Jonquetella anthropi DSM 22815]
gi|260630417|gb|EEX48611.1| ribosomal protein S2 [Jonquetella anthropi E3_33 E1]
gi|363986219|gb|EHM13049.1| ribosomal protein S2 [Jonquetella anthropi DSM 22815]
Length = 272
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 41/224 (18%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + + VH GH+ + +MKPYI+ R G I DL ++ + L A +FV +
Sbjct: 3 VVSMKQLLECGVHFGHQTRRWNPKMKPYIFTERNGVYIIDLQKTVKGLEKAYDFVRSVGQ 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL-------- 177
DG +LFVG Q I + AQ ++ + W G+ TN + L + V R+
Sbjct: 63 DDGTLLFVGTKRQAQDTIAEEAQRSGQYYINQRWLGGLLTNFQTLRKRVQRMIELQKIDA 122
Query: 178 -----------------------------PDLVILTNTLTTVLEP---NPAIGEAAKMCI 205
D+ L + L V++P + A+ EA K+ I
Sbjct: 123 DDDWGEHTKKEISLLRKEKAKLEKYLQGIRDMKKLPDAL-FVIDPRREDIAVLEARKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
P + IVD+NC+P +I +P+PGNDD AI+ + A+++G+
Sbjct: 182 PVISIVDTNCDPEMIDFPIPGNDDAIRAIKLITGLMANAMIEGR 225
>gi|429768858|ref|ZP_19300987.1| ribosomal protein S2 [Brevundimonas diminuta 470-4]
gi|429188411|gb|EKY29297.1| ribosomal protein S2 [Brevundimonas diminuta 470-4]
Length = 279
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 98/215 (45%), Gaps = 37/215 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A H GH+ + +M YI+G R I DL Q+ LL AL V +A + G
Sbjct: 8 MRTLLEAGAHFGHQTHRWNPKMDRYIFGSRSNIHIIDLSQTMPLLHQALVAVRDVAAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT-- 186
VLFVG Q + + + A C ++ W G TN + ++ RL +L + T
Sbjct: 68 RVLFVGTKRQAADPVAQAATRCAQYYMNNRWLGGTLTNWRTVSNSIQRLRELETILQTGE 127
Query: 187 --------------------------------LTTVLEPNP---AIGEAAKMCIPTVGIV 211
+ V++ N AI EA K+ IP + I+
Sbjct: 128 GRNKKELLTLQREKDRLELSLGGIKDMGSVPDIMFVIDTNKESIAIQEARKLNIPIIAIL 187
Query: 212 DSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAIL 246
D+N +P+ ITYPVPGNDD AIQ YC + A+L
Sbjct: 188 DTNSDPDGITYPVPGNDDAARAIQTYCDLIADAVL 222
>gi|406040339|ref|ZP_11047694.1| 30S ribosomal protein S2 [Acinetobacter ursingii DSM 16037 = CIP
107286]
Length = 249
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 105/239 (43%), Gaps = 39/239 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++D+ A H GH+ + +M+ YI+G R I +L+ + L DALNF +A +
Sbjct: 6 VSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFANQLASK 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
VLFVG S +I + AQ + W GM TN + L +++ RL DL +
Sbjct: 66 KNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQD 125
Query: 186 ------TLTTVLE---------------------PNP-----------AIGEAAKMCIPT 207
T LE P+ AI EA + IP
Sbjct: 126 GTFAKLTKREALERTREMDKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPV 185
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEVQ 266
+GIVD+N NP+ + Y +PGNDD A+ Y AIL GK+ Q ++ +E +
Sbjct: 186 IGIVDTNSNPDNVDYIIPGNDDAIRAVTLYASAMADAILAGKEYAQTQANAQAKGEEAK 244
>gi|262372147|ref|ZP_06065426.1| ribosomal protein S2 [Acinetobacter junii SH205]
gi|262312172|gb|EEY93257.1| ribosomal protein S2 [Acinetobacter junii SH205]
Length = 250
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++D+ A H GH+ + +M+ YI+G R I +L+ + L DALNFV ++A +
Sbjct: 6 VSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFVNNLASK 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
VLFVG S +I + AQ + W GM TN + L +++ RL DL +
Sbjct: 66 KNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQD 125
Query: 186 ------TLTTVLE---------------------PNP-----------AIGEAAKMCIPT 207
T LE P+ AI EA + IP
Sbjct: 126 GTFAKLTKREALERTREMDKLERALGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPV 185
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+GIVD+N NP+ + Y +PGNDD A+ Y AI+ GK+ Q
Sbjct: 186 IGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAIIAGKEYAQ 231
>gi|117925137|ref|YP_865754.1| 30S ribosomal protein S2P [Magnetococcus marinus MC-1]
gi|166225282|sp|A0L8Q5.1|RS2_MAGSM RecName: Full=30S ribosomal protein S2
gi|117608893|gb|ABK44348.1| SSU ribosomal protein S2P [Magnetococcus marinus MC-1]
Length = 262
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 101/223 (45%), Gaps = 47/223 (21%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
V+++ +A H GH+ + +MK +I+G R G I +L +S +LRDA NFV G
Sbjct: 6 VRELLEAGFHFGHQTKRWNPKMKRHIFGARNGVHIINLQKSVVMLRDACNFVRDTVQGGG 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q L+ A+ +F W G TN
Sbjct: 66 TVLFVGTKRQAVELVSAEARRTGQFYVNHRWLGGTLTNWRTIQGSIRRLKEIDKMRVDGT 125
Query: 167 ---------------SEKLFRAVT------RLPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
+K+ RA+ R P+L+I+ +T + A+ EA K+ I
Sbjct: 126 FEALTKRETQQLDREGQKIERALGGIKDMERQPNLIIVVDTRKESI----AVKEANKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
P V +VDSNC+P+ I YPVPGNDD A+ + ++++G
Sbjct: 182 PVVALVDSNCDPDPIDYPVPGNDDAIRALTLFISKMGDSVIEG 224
>gi|419558478|ref|ZP_14096339.1| 30S ribosomal protein S2 [Campylobacter coli 80352]
gi|419588657|ref|ZP_14124476.1| 30S ribosomal protein S2 [Campylobacter coli 317/04]
gi|380539275|gb|EIA63665.1| 30S ribosomal protein S2 [Campylobacter coli 80352]
gi|380569592|gb|EIA92030.1| 30S ribosomal protein S2 [Campylobacter coli 317/04]
Length = 263
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 47/231 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G + DL ++ R N V A
Sbjct: 1 MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL-------- 177
+LFVG Q I++ A+ C W GM TN + +++ +L
Sbjct: 61 EGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEE 120
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PD++ + +T+ + A+ EA +
Sbjct: 121 DGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKI----AVQEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+ IP V +D+NC+P+L+TYP+PGNDD ++Q +CQ AI +GK ++
Sbjct: 177 LKIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALRE 227
>gi|339478009|ref|YP_004706829.1| 30S ribosomal protein S2 [Candidatus Moranella endobia PCIT]
gi|338172560|gb|AEI74961.1| 30S ribosomal protein S2 [Candidatus Moranella endobia PCIT]
Length = 237
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V + D+ A VH GH+ + +MKP+I+G R I +LD++ + +AL + IA R
Sbjct: 4 VSMHDLLQAGVHFGHQTRYWNPKMKPFIFGARNNVHIINLDKTVAMFNEALAEINKIAAR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S ++ A++C +F W GM TN + + +++ RL DL +
Sbjct: 64 KGKILFVGTKRAASESVKAAAKNCDQFFVNYRWLGGMLTNWKTVRQSIKRLKDLEVQSQD 123
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L N+L + + AI EA + IP
Sbjct: 124 GTLEQMTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P I + +PGNDD AI Y V T + +G+
Sbjct: 184 FAIVDTNSDPAGIGFIIPGNDDAIRAINLYLTVVATTVGEGR 225
>gi|56552052|ref|YP_162891.1| 30S ribosomal protein S2 [Zymomonas mobilis subsp. mobilis ZM4]
gi|260752415|ref|YP_003225308.1| 30S ribosomal protein S2 [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|384411110|ref|YP_005620475.1| 30S ribosomal protein S2 [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|397676060|ref|YP_006517598.1| 30S ribosomal protein S2 [Zymomonas mobilis subsp. mobilis ATCC
29191]
gi|7388197|sp|Q9X5E7.1|RS2_ZYMMO RecName: Full=30S ribosomal protein S2
gi|4768860|gb|AAD29654.1|AF124757_14 30S ribosomal protein S2 [Zymomonas mobilis subsp. mobilis ZM4]
gi|56543626|gb|AAV89780.1| ribosomal protein S2 [Zymomonas mobilis subsp. mobilis ZM4]
gi|258551778|gb|ACV74724.1| ribosomal protein S2 [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|335931484|gb|AEH62024.1| ribosomal protein S2 [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|395396749|gb|AFN56076.1| ribosomal protein S2 [Zymomonas mobilis subsp. mobilis ATCC 29191]
Length = 250
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 99/228 (43%), Gaps = 38/228 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ + D H GH+ + +MKPYI+G R G I DL Q+ L AL+F++
Sbjct: 6 VTMQSLLDVGAHFGHQTHRWNPKMKPYIFGDRNGIHIMDLSQTVPLFTRALDFISQTVAH 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG Q I A+ +F W GM TN + ++ RL L
Sbjct: 66 GGKVLFVGTKRQAQEPIADAARRSGQFFVNHRWLGGMLTNWRTISGSIKRLKSLEEKLSG 125
Query: 181 --------VILTNT---------------------LTTVLEPNP---AIGEAAKMCIPTV 208
IL T + V++ N AI EA + IP V
Sbjct: 126 DTAGFTKKEILQLTRERDKLELSLGGIRDMGTIPDIMFVVDANKEELAIKEANTLGIPVV 185
Query: 209 GIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTL 256
I+DSN +P+ I +P+P NDD A++YYC A +G + + L
Sbjct: 186 AILDSNVSPDGIAFPIPANDDAARAVRYYCDAIAEAATRGDQQNRQEL 233
>gi|295105545|emb|CBL03089.1| SSU ribosomal protein S2P [Faecalibacterium prausnitzii SL3/3]
Length = 240
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 97/228 (42%), Gaps = 39/228 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M YI+ R G I DL ++ + L +A N+V +A
Sbjct: 3 VVSMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKLDEAYNYVKEVAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G +LFVG Q I A C W GM TN + + + R+ L +
Sbjct: 63 EGGDILFVGTKKQAQESIRDEALRCGMHYVNARWLGGMMTNFRTIRKRIDRMDQLAKMKE 122
Query: 186 TLTTVLEPNP---------------------------------------AIGEAAKMCIP 206
T L P A+ EA K+ IP
Sbjct: 123 NGTFELLPKKEVAKLELEMEKLDKYLGGVKNMKTLPKAMFIVDPHKERIAVAEARKLNIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
V IVD+NCNP+ I Y +PGNDD A++ A+L+GK+ Q+
Sbjct: 183 IVAIVDTNCNPDEIDYVIPGNDDAIRAVKLIAGAMADAVLEGKQGNQE 230
>gi|291530477|emb|CBK96062.1| SSU ribosomal protein S2P [Eubacterium siraeum 70/3]
Length = 245
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M PYI+ R G I DL ++ + L +A NF+ +A
Sbjct: 3 VVSMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKLDEAYNFIHEVAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G VLFVG Q + I++ A W GM TN + + + + RL L + N
Sbjct: 63 EGGEVLFVGTKKQAADSIKEEALRANAHYVNARWLGGMMTNFKTIEKRINRLEQLHTMEN 122
Query: 186 TLTTVLEPNP---------------------------------------AIGEAAKMCIP 206
T L P A+ EA K+ IP
Sbjct: 123 DGTFDLLPKKEVVKLNLEIEKLEKFLGGIKNMKKLPSALFVVDPRKEKIAVSEAKKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
V IVD+NC+P+ I Y +PGNDD A++ AI++ ++ + D
Sbjct: 183 VVAIVDTNCDPDEIDYVIPGNDDAIRAVKLIAGAMADAIIEARQGQAD 230
>gi|149186821|ref|ZP_01865131.1| ribosomal protein S2 [Erythrobacter sp. SD-21]
gi|148829488|gb|EDL47929.1| ribosomal protein S2 [Erythrobacter sp. SD-21]
Length = 251
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 100/222 (45%), Gaps = 40/222 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ + +A H GH+ + RMKPYI+G R G I DL QS L AL+F++ A
Sbjct: 8 VTMQQLIEAGAHFGHQTHRWNPRMKPYIFGARNGIHIIDLSQSVPLFARALDFISQTARS 67
Query: 127 DGIVLFVGQSAQNSLLIEKTA-QDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVIL-- 183
G VLFVG Q I + A Q F + R W GM TN + + ++ L L
Sbjct: 68 GGKVLFVGTKRQAQDPIREAALAAGQHFVNHR-WLGGMLTNWKTISGSIKELKTLEETLS 126
Query: 184 --TNTLTT-------------------------------VLEPNP---AIGEAAKMCIPT 207
T+ LT V++ N AI EA + IP
Sbjct: 127 GDTSGLTKKEVLNLTRKRDKLELSLGGIRNMGGIPDVMFVIDANKEDLAIKEANVLGIPV 186
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
V ++D+N +PN I +P+PGNDD AI+ YC A GK
Sbjct: 187 VAVLDTNVDPNGIAFPIPGNDDAARAIKLYCDAVGEAARSGK 228
>gi|409399652|ref|ZP_11249918.1| 30S ribosomal protein S2 [Acidocella sp. MX-AZ02]
gi|409131185|gb|EKN00898.1| 30S ribosomal protein S2 [Acidocella sp. MX-AZ02]
Length = 252
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 102/225 (45%), Gaps = 40/225 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ + +A VH GH + RM P+++GVR I DL Q+ L AL + +
Sbjct: 6 VSLRQLLEAGVHFGHNTRRWNPRMAPFLFGVRNQVHIIDLQQTVPLAERALKAIRDVTAA 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
G VLFVG + + + AQ C ++ W GM TN
Sbjct: 66 GGRVLFVGTKRAAAEHVAEAAQRCGQYYVNHRWLGGMLTNWKTITGSIKRLRQMDEMLSG 125
Query: 167 ----------------SEKLFRAVTRLPDLVILTNTLTTVLEPNP---AIGEAAKMCIPT 207
EKL RA+ + D+ L + L V++ N AI EA K+ IP
Sbjct: 126 ETHGYSKKEILNFTRDREKLERALGGIKDMGGLPDIL-FVIDTNKEKLAIEEANKLGIPV 184
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V I+DSN +P +T+P+PGNDD AI YC + A+L G A+
Sbjct: 185 VAILDSNSSPEGVTFPIPGNDDAIRAITLYCDLVAGAVLDGISAE 229
>gi|220931609|ref|YP_002508517.1| 30S ribosomal protein S2 [Halothermothrix orenii H 168]
gi|254764480|sp|B8CW53.1|RS2_HALOH RecName: Full=30S ribosomal protein S2
gi|219992919|gb|ACL69522.1| ribosomal protein S2 [Halothermothrix orenii H 168]
Length = 262
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 108/238 (45%), Gaps = 39/238 (16%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + ++ VH GH+ + +MK YI+ R G I DL ++ LL A ++V +A
Sbjct: 3 VVTMKQLLESGVHFGHQTRRWNPKMKDYIFTERNGIYIIDLQKTVALLDKAYDYVRDMAS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
+ +LFVG Q I+ A+ C + W GM TN + + V RL +L
Sbjct: 63 KGKTILFVGTKKQAQETIKTEAERCGMPYVNQRWLGGMLTNFRTIKKRVKRLNELEKMEE 122
Query: 181 -----------VILTNTLTTVLE-----------------------PNPAIGEAAKMCIP 206
VIL LE + A+ EA K+ IP
Sbjct: 123 DGLFEVLPKKEVILLKKERDKLERFLGGIRDMKNLPDVVYITDPRKESIAVAEARKLNIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQE 264
V IVD+NC+P+LI Y +PGNDD A++ A+L GK+ +Q T + E +E
Sbjct: 183 IVSIVDTNCDPDLIDYIIPGNDDAIRAVKLISSKIADAVLAGKQGEQLTEEAKPEDKE 240
>gi|335038959|ref|ZP_08532153.1| ribosomal protein S2 [Caldalkalibacillus thermarum TA2.A1]
gi|334181158|gb|EGL83729.1| ribosomal protein S2 [Caldalkalibacillus thermarum TA2.A1]
Length = 233
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 39/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M YI+ R G I DL ++ + + +A NFV +A
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVKKVEEAYNFVRDLAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
G +LFVG Q I++ A+ C F W G TN + + + + RL +L
Sbjct: 63 NGGKILFVGTKKQAQESIKEEAERCNMFYINTRWLGGTLTNFQTIRKRIERLHELEQMET 122
Query: 181 -----------VILTNTLTTVLE------------PNP-----------AIGEAAKMCIP 206
VIL LE P+ AI EA K+ IP
Sbjct: 123 DGTFDVLPKKEVILLRKEKERLEKFLGGIKQMKELPDALFVVDPRKERIAISEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V IVD+NC+P+ I Y +PGNDD A++ A+L+G + +Q
Sbjct: 183 IVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTSKMADAVLEGNQGEQ 229
>gi|403225223|gb|AFR24835.1| 30S ribosomal protein S2 [uncultured Pelagomonas]
Length = 226
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 46/226 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+K+ + A VH GHK + +M PYIY R G I DL Q+++LL++A +FV A +
Sbjct: 4 IKIAQLLKAGVHFGHKTPRWNPKMFPYIYMERNGIHILDLVQTSQLLQEACDFVQEAAEQ 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-----------------SEK 169
LFVG Q +I+ A C+ F W G+ TN E
Sbjct: 64 RKTFLFVGTKPQAVEIIKDEAIRCESFYVNHRWYGGLLTNWQTVKGRIATLKKLEEQEET 123
Query: 170 LF-------------------------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMC 204
+F + + R+PD++I+ + + AI EA K+
Sbjct: 124 VFPTLPKKEAASLKKQLTKLRTQLNGVKNMDRIPDIMIVIDQNHEL----TAIREAIKLN 179
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
IP + I+DSNC+P+LI P+PGNDD S+I+ + +I G++
Sbjct: 180 IPIISILDSNCDPDLIDVPIPGNDDAISSIKIILEALTDSIRIGRQ 225
>gi|224372497|ref|YP_002606869.1| 30S ribosomal protein S2 [Nautilia profundicola AmH]
gi|223588781|gb|ACM92517.1| ribosomal protein S2 [Nautilia profundicola AmH]
Length = 279
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 47/227 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +KD+ + VH GH+ + +MK YI+GVR+ I DL ++ ++ A N V + A
Sbjct: 5 VTMKDLLECGVHFGHQKRRWNPKMKKYIFGVRKNIYIIDLQKTLRHIKYAYNVVKNAAEE 64
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
+LFVG Q I++ A+ C W GM TN + + +++ +L
Sbjct: 65 GKTILFVGTKKQAIDAIKEHAERCGMPYVNHRWLGGMLTNFKTIQKSIRKLEIIEKMEET 124
Query: 178 ----------------------------------PDLVILTNTLTTVLEPNPAIGEAAKM 203
PD++ + +T+ + A+GEA K+
Sbjct: 125 GQINLLTKKERLILARRKAKLEKFIGGIRHMKTIPDMLFIIDTVKEKI----AVGEANKL 180
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
+P V VD+NC+P+LI P+PGNDD ++ +C+ AI++GK+
Sbjct: 181 GLPIVAPVDTNCDPDLIDVPIPGNDDAIRSVNLFCKTIADAIIEGKE 227
>gi|241662943|ref|YP_002981303.1| 30S ribosomal protein S2 [Ralstonia pickettii 12D]
gi|309782137|ref|ZP_07676867.1| ribosomal protein S2 [Ralstonia sp. 5_7_47FAA]
gi|404377830|ref|ZP_10982930.1| 30S ribosomal protein S2 [Ralstonia sp. 5_2_56FAA]
gi|240864970|gb|ACS62631.1| ribosomal protein S2 [Ralstonia pickettii 12D]
gi|308919203|gb|EFP64870.1| ribosomal protein S2 [Ralstonia sp. 5_7_47FAA]
gi|348612949|gb|EGY62554.1| 30S ribosomal protein S2 [Ralstonia sp. 5_2_56FAA]
Length = 247
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 111/223 (49%), Gaps = 41/223 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +++M +A VH GH+ + +M PYI+G R I +L+++ + +DAL +V +A
Sbjct: 3 VTMREMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKTLPMYQDALKYVRQLAAN 62
Query: 127 DGIVLFVGQSAQN-SLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI--- 182
G +LFVG Q+ +L E+ A+ F +R W GM TN + + ++ RL D+ +
Sbjct: 63 RGTILFVGTKRQSREILAEEAARAGMPFVDSR-WLGGMLTNFKTVKTSIKRLKDMEVAKE 121
Query: 183 ---------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIP 206
L ++ + + P+ A+ EAAK+ IP
Sbjct: 122 AGATETMSKKEALMFEREMDKLVKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIP 181
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+G+VD+N +P I Y +PGNDD+ A+ Y + AIL+G+
Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>gi|94676820|ref|YP_588957.1| 30S ribosomal protein S2 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|123260523|sp|Q1LSV7.1|RS2_BAUCH RecName: Full=30S ribosomal protein S2
gi|94219970|gb|ABF14129.1| ribosomal protein S2 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 232
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 101/221 (45%), Gaps = 39/221 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V + DMF A VH GH+ + RMKP+I+GVR I +L+Q+A + +AL + IA R
Sbjct: 4 VLMHDMFHAGVHFGHQTRYWNPRMKPFIFGVRNKIHIINLEQTAPMFNNALFELNKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G +LFVG S I++ A+ C +F W GM TN + + +++ L +L
Sbjct: 64 KGKILFVGTKRAASEAIKEAARSCDQFFVNHRWLGGMLTNWKTVRQSIKHLKELETQSQD 123
Query: 181 ----------VILTNTLTTVLEPN-----------------------PAIGEAAKMCIPT 207
I+ N LE + A+ EA + IP
Sbjct: 124 GTLDKLTKKEAIICNRKLEKLEKSLGGIKDLGGLPDALFVIDAEREKIAVKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+VD+N +PN I + +PGNDD AI Y AI +G
Sbjct: 184 FAVVDTNTDPNGIDFIIPGNDDAIRAINLYLTAVAHAISEG 224
>gi|422023722|ref|ZP_16370224.1| 30S ribosomal protein S2 [Providencia sneebia DSM 19967]
gi|414091737|gb|EKT53418.1| 30S ribosomal protein S2 [Providencia sneebia DSM 19967]
Length = 241
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL + IA R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A C ++ W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ I Y +PGNDD AI+ Y + +G+
Sbjct: 184 FAIVDTNSDPDGIDYVIPGNDDAIRAIKLYLGAVAATVREGR 225
>gi|153003171|ref|YP_001377496.1| 30S ribosomal protein S2 [Anaeromyxobacter sp. Fw109-5]
gi|209573648|sp|A7H716.1|RS2_ANADF RecName: Full=30S ribosomal protein S2
gi|152026744|gb|ABS24512.1| ribosomal protein S2 [Anaeromyxobacter sp. Fw109-5]
Length = 315
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 47/226 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K + +A VH GH+ + +MKPYI+G R G I DL ++ L R AL FV+ +
Sbjct: 12 ITMKQLLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVGLARGALRFVSDAVAK 71
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
G+VLFVG Q I + A ++ T W G TN
Sbjct: 72 GGMVLFVGTKKQAQDAIREEASRSGQYHVTNRWLGGTLTNFKTVKQGIDRLKTIEKMAAD 131
Query: 167 -----------------SEKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKM 203
EKL + ++RLP + + +T + + A+ EA ++
Sbjct: 132 GTYERLPKKEVAQLEREREKLEKNLGGIKEMSRLPAAIFVIDT----KKEHIAVHEANRL 187
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IP V +VD+NC+P I Y +PGNDD +I+ + A ++G+
Sbjct: 188 GIPVVAVVDTNCDPEGIEYVIPGNDDAIRSIRLFTGKIAEACIEGR 233
>gi|302383609|ref|YP_003819432.1| 30S ribosomal protein S2 [Brevundimonas subvibrioides ATCC 15264]
gi|302194237|gb|ADL01809.1| ribosomal protein S2 [Brevundimonas subvibrioides ATCC 15264]
Length = 298
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 46/225 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A H GH+ + +M+ YI+G R I DL Q+ L AL V +A + G
Sbjct: 8 MRTLLEAGAHFGHQTHRWNPKMERYIFGSRSNIHIIDLSQTMPLFHQALVAVREVAAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q + + + A+ C ++ W G TN + + ++ RL
Sbjct: 68 RVLFVGTKRQAAEPVAEAAKRCAQYYMNNRWLGGTLTNWKTVSGSIARLRELEGILERGG 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PD++ + +T + AI EA K+ IP
Sbjct: 128 EGRVKKELVNLSREKEKLELSLGGIRDMGSIPDIMFVIDTNKEAI----AILEARKLNIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+ I+D+N +P+ ITYP+PGNDD AIQ YC + A+L G A
Sbjct: 184 IIAILDTNSDPDGITYPIPGNDDAARAIQTYCDLIADAVLDGLAA 228
>gi|119471167|ref|ZP_01613699.1| 30S ribosomal subunit protein S2 [Alteromonadales bacterium TW-7]
gi|359447980|ref|ZP_09237536.1| small subunit ribosomal protein S2 [Pseudoalteromonas sp. BSi20480]
gi|392538751|ref|ZP_10285888.1| 30S ribosomal protein S2 [Pseudoalteromonas marina mano4]
gi|119445823|gb|EAW27105.1| 30S ribosomal subunit protein S2 [Alteromonadales bacterium TW-7]
gi|358046204|dbj|GAA73785.1| small subunit ribosomal protein S2 [Pseudoalteromonas sp. BSi20480]
Length = 242
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 103/223 (46%), Gaps = 39/223 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+Q+ + +AL F++ A
Sbjct: 4 VSMRDMLQAGVHFGHQARYWNPKMKPFIFGTRNRVHIINLEQTVPMFNNALKFLSGAAAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G VLFVG S +++ A +F W GM TN + + +++ RL DL I
Sbjct: 64 KGKVLFVGTKRAASDAVKEAAIASDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 -----LTNTLTTVLE-------------------PNP-----------AIGEAAKMCIPT 207
LT T +L P+ AI EA + IP
Sbjct: 124 GTFEKLTKKETLMLNREMEKLEKSLGGIKNMGGLPDAIFVIDADHEHIAIREANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
V IVD+N NP+ + + VPGNDD A+ Y AI +G++
Sbjct: 184 VAIVDTNSNPDGVDFIVPGNDDAIRAVTLYTSAVAAAITEGRE 226
>gi|295100710|emb|CBK98255.1| SSU ribosomal protein S2P [Faecalibacterium prausnitzii L2-6]
Length = 240
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 98/228 (42%), Gaps = 39/228 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M YI+ R G I DL ++ + L +A N+V +A
Sbjct: 3 VVSMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVKKLDEAYNYVKEVAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G +LFVG Q I A C W GM TN + + + R+ L + +
Sbjct: 63 EGGDILFVGTKKQAQESIRDEALRCGMHYVNARWLGGMLTNFRTIRKRIDRMAQLQNMKD 122
Query: 186 TLTTVLEPNP---------------------------------------AIGEAAKMCIP 206
T L P A+ EA K+ IP
Sbjct: 123 NGTFELLPKKEVAKLELEMEKLDKYLGGVKNMKTLPKAMFIVDPHKERIAVAEARKLNIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
V IVD+NCNP+ I Y +PGNDD A++ A+L+GK+ Q+
Sbjct: 183 IVAIVDTNCNPDEIDYVIPGNDDAIRAVKLIAGAMADAVLEGKQGNQE 230
>gi|163795642|ref|ZP_02189608.1| Ribosomal protein S2 [alpha proteobacterium BAL199]
gi|159179241|gb|EDP63774.1| Ribosomal protein S2 [alpha proteobacterium BAL199]
Length = 269
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 39/223 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + +M+ YI+GVR I DL Q+ +L AL V + G
Sbjct: 1 MRQLLEAGVHFGHHTRRWNPKMESYIFGVRNNVHILDLRQTVPMLHRALQAVRDTTAKGG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT-- 186
VLFVG Q S ++ + A+ ++ W GM TN + + ++ RL DL L ++
Sbjct: 61 RVLFVGTKRQASDMVAEAAKRSGQYFVNHRWLGGMLTNWKTISHSIKRLRDLEDLLDSPE 120
Query: 187 ----------------------------------LTTVLEPNP---AIGEAAKMCIPTVG 209
+ V++ N AI EA K+ IP V
Sbjct: 121 SLGLTKKETLGLTREREKLERALGGIKEMGGLPDILFVIDTNKEALAIQEANKLGIPVVA 180
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
++DSN +P+ + Y +PGNDD A+ YC + +A+L G +A+
Sbjct: 181 VLDSNSSPDGVQYGIPGNDDAMRAVATYCDLIASAVLDGLQAE 223
>gi|317132577|ref|YP_004091891.1| 30S ribosomal protein S2 [Ethanoligenens harbinense YUAN-3]
gi|315470556|gb|ADU27160.1| ribosomal protein S2 [Ethanoligenens harbinense YUAN-3]
Length = 246
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 99/227 (43%), Gaps = 39/227 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + +A VH GH+ + +M PYI+ R G I DL ++ L +A NFV ++
Sbjct: 3 SVVTMKQLLEAGVHFGHQTRRWNPKMTPYIFTERNGIYIIDLQKTVRKLEEAYNFVRKLS 62
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
+LFVG Q I + A+ + W GM TN + R + RL L +
Sbjct: 63 EGGNTILFVGTKKQAQDSIREEAERAGAYFVNARWLGGMLTNFRTIRRRIDRLAQLRKME 122
Query: 185 NTLTTVLEPNP---------------------------------------AIGEAAKMCI 205
T L P A+ EA K+ I
Sbjct: 123 EDGTFELLPKKEVVKLKLEIEKLEKYLGGIKDMKKLPAALFIVDPRKERIAVSEARKLGI 182
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
P V IVD+NC+P+ I Y +PGNDD A++ V A+L+GK+ +
Sbjct: 183 PIVAIVDTNCDPDEIDYVIPGNDDAIRAVRLISSVMANALLEGKQGE 229
>gi|217967590|ref|YP_002353096.1| 30S ribosomal protein S2 [Dictyoglomus turgidum DSM 6724]
gi|226697638|sp|B8E2Y2.1|RS2_DICTD RecName: Full=30S ribosomal protein S2
gi|217336689|gb|ACK42482.1| ribosomal protein S2 [Dictyoglomus turgidum DSM 6724]
Length = 246
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 105/241 (43%), Gaps = 47/241 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K + +A VH GH+ +MK YI+ R G I DL ++ L +A F A
Sbjct: 6 MKQLLEAGVHFGHQTKRWCPKMKEYIFSERNGIHIIDLQKTLVKLEEAYEFAKEQAKEGK 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS--------------------- 167
LFVG Q IE+ A+ C F + W GM TN
Sbjct: 66 TFLFVGTKKQAQQTIEEEAKRCGAFYVNQRWLGGMLTNFTTIKSRIDYMIKLEELKNNGY 125
Query: 168 ----------------EKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
EKL R + R+PD++ + + + A+ EA K+ I
Sbjct: 126 FDKLPKKQANRLNRELEKLIKVFDGLRGIERIPDVLYIVDPKREEI----AVKEANKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEV 265
P + IVD+NC+P LITYP+PGNDD +I+ AIL+G+ ++ L + +++
Sbjct: 182 PIIAIVDTNCDPELITYPIPGNDDAIRSIKLITSKIADAILEGRDLREKEADLQLKDEDL 241
Query: 266 Q 266
Q
Sbjct: 242 Q 242
>gi|167750008|ref|ZP_02422135.1| hypothetical protein EUBSIR_00976 [Eubacterium siraeum DSM 15702]
gi|167657029|gb|EDS01159.1| ribosomal protein S2 [Eubacterium siraeum DSM 15702]
gi|291557908|emb|CBL35025.1| SSU ribosomal protein S2P [Eubacterium siraeum V10Sc8a]
Length = 245
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M PYI+ R G I DL ++ + L +A NF+ +A
Sbjct: 3 VVSMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKLDEAYNFIHEVAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G VLFVG Q + I++ A W GM TN + + + + RL L + N
Sbjct: 63 EGGEVLFVGTKKQAADSIKEEALRANAHYVNARWLGGMMTNFKTIEKRIKRLEQLHTMEN 122
Query: 186 TLTTVLEPNP---------------------------------------AIGEAAKMCIP 206
T L P A+ EA K+ IP
Sbjct: 123 DGTFDLLPKKEVVKLNLEIEKLEKFLGGIKNMKKLPSALFVVDPRKEKIAVSEAKKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
V IVD+NC+P+ I Y +PGNDD A++ AI++ ++ + D
Sbjct: 183 VVAIVDTNCDPDEIDYVIPGNDDAIRAVKLIAGAMADAIIEARQGQAD 230
>gi|347527928|ref|YP_004834675.1| 30S ribosomal protein S2 [Sphingobium sp. SYK-6]
gi|345136609|dbj|BAK66218.1| 30S ribosomal protein S2 [Sphingobium sp. SYK-6]
Length = 253
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V + + +A H GH+ + RMKPYI+G R G I DL Q+ L AL+FV+
Sbjct: 5 VVTLHQLIEAGAHFGHQTHRWNPRMKPYIFGERNGIHIIDLSQTVPLFARALDFVSTTVA 64
Query: 126 RDGIVLFVGQSAQNSLLIEKTA-QDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
G VLFVG Q I A + Q F + R W GM TN + + ++ RL L
Sbjct: 65 AGGKVLFVGTKRQAQEAIADGARRSGQHFVNHR-WLGGMLTNWKTISGSIKRLKSLEEKL 123
Query: 181 ----------VILTNT---------------------LTTVLEPNP---AIGEAAKMCIP 206
+L T + V++ N AI EA + IP
Sbjct: 124 SGDTHGFTKKEVLQMTRERDKLELSLGGIRDMGGIPDVMFVIDANKEELAIKEANTLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V I+DSN NP I +PVP NDD AI+ YC+ A KG +
Sbjct: 184 VVAILDSNVNPAGIAFPVPANDDASRAIRLYCEAVAQAATKGNQG 228
>gi|253988125|ref|YP_003039481.1| 30s ribosomal protein s2 [Photorhabdus asymbiotica]
gi|253779575|emb|CAQ82736.1| 30s ribosomal protein s2 [Photorhabdus asymbiotica]
Length = 241
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL + IA R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIAAR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S ++++AQ C ++ W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVKESAQSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALIRSRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+VD+N +P+ + + +PGNDD A++ Y TA+ +G+
Sbjct: 184 FAVVDTNSDPDGVDFIIPGNDDAIRAVKLYLGAVATAVREGR 225
>gi|402547914|ref|ZP_10844779.1| ribosomal protein S2 [Campylobacter sp. FOBRC14]
gi|401015941|gb|EJP74718.1| ribosomal protein S2 [Campylobacter sp. FOBRC14]
Length = 289
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 47/227 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G I DL ++ R N V A
Sbjct: 27 MVTMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYIIDLQKTIRYFRYTYNIVRDAAA 86
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+LFVG Q I++ A+ C W GM TN
Sbjct: 87 EGKTILFVGTKKQAVEAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIETMEE 146
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + LPD+V + +T+ + A+ EA +
Sbjct: 147 DGSINLLTKKEALMLRRKKEKLIATLGGIRNMKNLPDMVFIVDTVKEKI----AVQEANR 202
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+ +P V +D+NC+P+++ YP+PGNDD ++Q +CQ AI +GK
Sbjct: 203 LKMPVVAPIDTNCDPDVVDYPIPGNDDAIRSVQLFCQEMAEAINEGK 249
>gi|441506202|ref|ZP_20988178.1| SSU ribosomal protein S2p (SAe) [Photobacterium sp. AK15]
gi|441426150|gb|ELR63636.1| SSU ribosomal protein S2p (SAe) [Photobacterium sp. AK15]
Length = 242
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + DAL + IA R
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAEINKIAAR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG S I+++A +C ++ W GM TN + + +++ RL DL
Sbjct: 64 KGKVLFVGTKRAASESIKESAVNCDQYYVNNRWLGGMLTNWKTVRQSIKRLKDLETQSTD 123
Query: 181 -----------VILTNTLTTVLE-----------PNP-----------AIGEAAKMCIPT 207
++LT + + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMLTREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+VD+N NP+ + + +PGNDD +IQ Y + +G+
Sbjct: 184 FAVVDTNSNPDGVDFVIPGNDDAIRSIQLYTNAVAATVTEGR 225
>gi|167624895|ref|YP_001675189.1| 30S ribosomal protein S2 [Shewanella halifaxensis HAW-EB4]
gi|189044996|sp|B0TP83.1|RS2_SHEHH RecName: Full=30S ribosomal protein S2
gi|167354917|gb|ABZ77530.1| ribosomal protein S2 [Shewanella halifaxensis HAW-EB4]
Length = 242
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 109/233 (46%), Gaps = 45/233 (19%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +++M A VH GH+ + +MKP+I+G R G I +L+ + + +AL F++++A +
Sbjct: 4 VSMREMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG S I++ A C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKVLFVGTKRAASEAIKEAAVSCDQFYVDHRWLGGMLTNWKTVRQSIKRLKDLESQSVD 123
Query: 181 -----------VILTNTLTTVLEP----------------------NPAIGEAAKMCIPT 207
++ T L + + + AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELDKLEKSLGGIKNMAGLPDVIFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK------KAKQD 254
V +VD+N +P+ I Y +PGNDD +I+ Y A G+ +A+QD
Sbjct: 184 VAVVDTNSSPDGINYIIPGNDDAMRSIRLYTGSVAAAAKAGRGQDLAVQAEQD 236
>gi|73667135|ref|YP_303151.1| 30S ribosomal protein S2 [Ehrlichia canis str. Jake]
gi|123745847|sp|Q3YRV2.1|RS2_EHRCJ RecName: Full=30S ribosomal protein S2
gi|72394276|gb|AAZ68553.1| SSU ribosomal protein S2P [Ehrlichia canis str. Jake]
Length = 291
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 38/221 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++D+ ++ VH GHK + +M PYIYGV I +L + LL++AL + + + G
Sbjct: 9 MRDLVESGVHFGHKASRWNPKMAPYIYGVYNDIHIINLQNTVVLLKNALKALYDVVLKRG 68
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLT 188
VLF+G Q S +I A C ++ W GM TN E + ++ +L + L +
Sbjct: 69 RVLFIGTKVQASAIIADEAIRCGQYYVNNRWLGGMLTNWETISLSIKKLKEYEKLIENVD 128
Query: 189 T-----------------------------------VLEPNP---AIGEAAKMCIPTVGI 210
V++ N AI EA K+ IP + +
Sbjct: 129 NQFTKKELLLFEKKRAKLDRSIGGICNMGGLPHVLFVIDTNKEHIAIKEANKLNIPVIAV 188
Query: 211 VDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+D+N +P I YP+PGNDD +I ++C++ IL+ ++
Sbjct: 189 LDTNSDPTGIDYPIPGNDDAVRSIDFFCKIVSDTILEAIRS 229
>gi|32266571|ref|NP_860603.1| 30S ribosomal protein S2 [Helicobacter hepaticus ATCC 51449]
gi|61215711|sp|Q7VH95.1|RS2_HELHP RecName: Full=30S ribosomal protein S2
gi|32262622|gb|AAP77669.1| ribosomal protein S2 [Helicobacter hepaticus ATCC 51449]
Length = 264
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 104/232 (44%), Gaps = 47/232 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +KD+ + VH GH+ + +MK +I+GVR+ I DL ++ R N + A
Sbjct: 1 MVTMKDLLECGVHFGHQTRRWNPKMKRFIFGVRKNIHIIDLQKTLRYFRYTYNIIKQAAS 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL-------- 177
+++FVG Q S +++ A+ W GM TN + +++ RL
Sbjct: 61 EGKVIMFVGTKRQASETLKQYAESVNAPYVNYRWLGGMLTNFSTIKKSIRRLEIIEEMES 120
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PD++ + + + A+ EA +
Sbjct: 121 SGQIDLLTKKEKLMLQRKKEKLDKYLGGVRHMKKAPDMIFVIDAAKEKI----AVAEARR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
+ IP V +D+NC+P+++ YP+PGNDD +IQ +C+ AIL+G+ +D
Sbjct: 177 LGIPVVAPLDTNCDPDMVDYPIPGNDDAIRSIQLFCKEISEAILEGRSENKD 228
>gi|339484804|ref|YP_004696590.1| 30S ribosomal protein S2 [Nitrosomonas sp. Is79A3]
gi|338806949|gb|AEJ03191.1| ribosomal protein S2 [Nitrosomonas sp. Is79A3]
Length = 239
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 117/237 (49%), Gaps = 40/237 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYIYG R I +L+++ + +A+ +V ++
Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPYIYGHRNKIHIINLEKTLVMYEEAMKYVRQLSAN 62
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL--VILT 184
G++LFVG Q ++ + A C + W GM TN + + +++ RL D+ ++
Sbjct: 63 KGVILFVGTKRQARDIVREEATRCGSPYVDQRWLGGMLTNFKTIKQSIKRLQDMETMVQD 122
Query: 185 NTLTTVLEPNP-------------------------------------AIGEAAKMCIPT 207
TL +++ AI EA K+ IP
Sbjct: 123 GTLDKLVKKEALDLHRELDKLNSSLGGIKDMKGLPDALFVIDVGYQKGAITEAKKLGIPV 182
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK-KAKQDTLKLLSEKQ 263
+G++D+N NP+ + Y +PGNDD+ AI+ Y + A+L+G+ ++ Q+ +++ +E +
Sbjct: 183 IGVIDTNHNPDGLQYLIPGNDDSSRAIRLYARGVADAVLEGRNQSIQEIVEMSAEAE 239
>gi|160872239|ref|ZP_02062371.1| ribosomal protein S2 [Rickettsiella grylli]
gi|159121038|gb|EDP46376.1| ribosomal protein S2 [Rickettsiella grylli]
Length = 262
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 112/241 (46%), Gaps = 43/241 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ +F+A VH GH+ + +M PYIYGVR G I DL+++ E + +AL+++A IA R G
Sbjct: 7 LRQLFEAGVHFGHRTCFREPKMMPYIYGVRNGISIIDLEKTREYITEALHYIAKIAARPG 66
Query: 129 I-VLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT--- 184
+LFVG L+++ A C W G+ TN + +++ RL +L + +
Sbjct: 67 SKILFVGTKRAARDLVKEQALRCGMPYVNHRWLGGLLTNYRTIRQSIKRLKELELQSKDG 126
Query: 185 --NTLTTVLEPN----------------------------------PAIGEAAKMCIPTV 208
N LT N AI EA K+ IP +
Sbjct: 127 RFNQLTKKEALNLQRQMDKLERSLGGIKDMSGLPDVLFVIDRGYEHIAICEAQKLKIPVI 186
Query: 209 GIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK---KAKQDTLKLLSEKQEV 265
IVD+N +P I Y +PGNDD AI Y Q+ IL+ + K + D + +E E
Sbjct: 187 SIVDTNHSPEGIDYVIPGNDDASRAITLYTQMVSETILEARAEAKKRADLTRAEAENGEN 246
Query: 266 Q 266
Q
Sbjct: 247 Q 247
>gi|116492643|ref|YP_804378.1| 30S ribosomal protein S2 [Pediococcus pentosaceus ATCC 25745]
gi|421894422|ref|ZP_16324911.1| ribosomal protein S2 [Pediococcus pentosaceus IE-3]
gi|122265893|sp|Q03FT6.1|RS2_PEDPA RecName: Full=30S ribosomal protein S2
gi|116102793|gb|ABJ67936.1| SSU ribosomal protein S2P [Pediococcus pentosaceus ATCC 25745]
gi|385272726|emb|CCG90283.1| ribosomal protein S2 [Pediococcus pentosaceus IE-3]
Length = 260
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 39/229 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +MKP+I+ R G I DL ++ +L+ +A NFV +A
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKPFIFTERNGIYIIDLQKTVKLIDNAYNFVKDVA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
DG+VLFVG Q IE+ A+ ++ W G TN + + + RL DL
Sbjct: 62 ANDGVVLFVGTKKQAQTAIEEEAKRAGQYFVNHRWLGGTLTNWNTIQKRIKRLKDLKAME 121
Query: 181 ------------VILTNTLTTVLEP------------------NP-----AIGEAAKMCI 205
V L N LE +P AI EA K+ I
Sbjct: 122 EDGTFDRLPKKEVALLNKQKDKLEKFLGGIEDMPHTPDVLFVVDPRKEQIAIKEAQKLNI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
P V +VD+N +P+ + +P NDD A++ A+++G++ + +
Sbjct: 182 PVVAMVDTNSDPDQVDVIIPSNDDAIRAVRLITAKMADAVIEGRQGEDE 230
>gi|149907553|ref|ZP_01896300.1| 30S ribosomal protein S2 [Moritella sp. PE36]
gi|149809223|gb|EDM69152.1| 30S ribosomal protein S2 [Moritella sp. PE36]
Length = 242
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MK YI+G R I +L+Q+ L DAL F+ ++A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKQYIFGARSKVHIINLEQTVPLFNDALAFIKNVADK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG I++ A C +F W GM TN + + +++ RL L
Sbjct: 64 KGKVLFVGTKKAAGETIKEAALSCDQFYVDHRWLGGMLTNWKTVRQSIKRLTTLEAQAQD 123
Query: 181 ---------VILTNTLTTV-LEPN-----------------------PAIGEAAKMCIPT 207
L NT + LE + AI EA + IP
Sbjct: 124 GTFEQLTKKEALMNTREMIKLEKSLGGIKTMGGLPDVLFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
V IVD+N NP+ I + VPGNDD AI+ Y + +G+
Sbjct: 184 VAIVDTNSNPDNIDFVVPGNDDAIRAIKLYAGAVAACVNEGR 225
>gi|357039333|ref|ZP_09101127.1| ribosomal protein S2 [Desulfotomaculum gibsoniae DSM 7213]
gi|355358232|gb|EHG06000.1| ribosomal protein S2 [Desulfotomaculum gibsoniae DSM 7213]
Length = 232
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 39/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M PYI+ R G I DL ++ + + +A NFV
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTVKKVEEAYNFVKSTVQ 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G +LFVG Q + + A+ C F + W GM TN + + R + RL +L +
Sbjct: 63 EGGNILFVGTKKQAQESVREEAERCGMFYVNQRWLGGMLTNFQTIRRRIDRLHELEKMEQ 122
Query: 186 TLTT------------------------------------VLEPNP---AIGEAAKMCIP 206
T V++P A+ E K+ IP
Sbjct: 123 DGTMDKLPKKEVAELLHEKERLAKFLGGIKEMRRLPQALFVIDPRKERIAVAEGRKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V IVD+NC+P+ + Y +PGNDD A++ A+++G + +Q
Sbjct: 183 IVAIVDTNCDPDEVDYIIPGNDDAIRAVRLLTAKMADAVIEGNQGEQ 229
>gi|222151089|ref|YP_002560243.1| 30S ribosomal protein S2 [Macrococcus caseolyticus JCSC5402]
gi|254764482|sp|B9EBD6.1|RS2_MACCJ RecName: Full=30S ribosomal protein S2
gi|222120212|dbj|BAH17547.1| 30S ribosomal protein S2 [Macrococcus caseolyticus JCSC5402]
Length = 255
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 39/225 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +MK YI+ R G I DL ++ + + +A NFV I+
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKSISE 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G VLFVG Q I++ A+ +F W G TN + + + V R+ ++ +
Sbjct: 63 EGGTVLFVGTKKQAQEAIKEEAERAGQFFINERWLGGTLTNYKTISKRVKRISEIEKMEE 122
Query: 186 TLT------------------------------------TVLEPNP---AIGEAAKMCIP 206
T V++P AI EA K+ +P
Sbjct: 123 DGTFDVLPKKEVVELKKEYDRWVKFLGGIREMKSMPSALFVVDPRKERNAIAEAKKLHVP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
VGIVD+NC+P+ I Y +P NDD A++ AIL+G++
Sbjct: 183 IVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEGRQG 227
>gi|170094018|ref|XP_001878230.1| mitochondrial 37S ribosomal protein MRP4 [Laccaria bicolor
S238N-H82]
gi|164646684|gb|EDR10929.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 200
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 93/195 (47%), Gaps = 11/195 (5%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+ + + H GH ++ PY YG R G I DLD + LLR A+N V +A G
Sbjct: 4 ISALLASGAHFGHASTRMNPNFMPYAYGTRAGITIIDLDHTLPLLRRAVNLVRAVARAGG 63
Query: 129 IVLFVGQSAQNSLLIEKTAQ--DCQEFAHTRFWRQGMFTNSEKLFRA-----VTRLPDLV 181
+LF+G + +I+K A+ Q F W G +N ++F +PDL
Sbjct: 64 QILFIGTRSDLRPVIQKAAERLGSQGFHVGERWVPGTLSNRRQIFGGGVVDKTNVVPDLA 123
Query: 182 ILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVF 241
I+ N L+ + AI E + +PT+G++DSN +P ++ YP+P ND+ + V
Sbjct: 124 IILNPLSNAI----AISELSVEHVPTIGVIDSNVDPRVVMYPIPANDENTRTAELIAGVL 179
Query: 242 KTAILKGKKAKQDTL 256
A +G +Q L
Sbjct: 180 SVAGREGVALRQADL 194
>gi|408356834|ref|YP_006845365.1| 30S ribosomal protein S2 [Amphibacillus xylanus NBRC 15112]
gi|407727605|dbj|BAM47603.1| 30S ribosomal protein S2 [Amphibacillus xylanus NBRC 15112]
Length = 260
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 39/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +MK YI+ R G I DL ++ +++ A NF+ +A
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKMVDVAYNFIREVAE 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G VLFVG Q I++ A ++ + W G TN E + +++ RL D+ +
Sbjct: 63 NGGSVLFVGTKKQAQEAIKEEAIRSGQYYINQRWLGGTLTNFETIRKSINRLKDIERMEE 122
Query: 186 TLT------------------------------------TVLEPNP---AIGEAAKMCIP 206
T V++P A+ EA K+ IP
Sbjct: 123 DGTFDVLPKKETVNLLKEKDRLVKFLGGIKDMKKLPDVLFVVDPRKERIAVAEAKKLNIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
VGIVD+NC+P+ I Y +P NDD A++ AIL+ K+ ++
Sbjct: 183 IVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSTMADAILEAKQGEE 229
>gi|399154436|ref|ZP_10754503.1| 30S ribosomal protein S2 [gamma proteobacterium SCGC AAA007-O20]
Length = 343
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 104/232 (44%), Gaps = 39/232 (16%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K M +A VH GH+ +M+P+IYG R G I +L+++ D LNF + A + G
Sbjct: 6 MKKMLEAGVHFGHRARFWHPKMEPFIYGTRNGVHIINLEKTLPQFNDVLNFASKTASQGG 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN--- 185
+LFVG S +I++ A C W GM TN + + ++ RL DL L
Sbjct: 66 SILFVGTKRAASNIIKEEAIRCGMPYVNHRWLGGMMTNYKTIKASIKRLKDLEFLAEESF 125
Query: 186 ---------TLTTVLEP--------------------------NPAIGEAAKMCIPTVGI 210
+T +E A+ EA + +P +G+
Sbjct: 126 AQYSKKEALAMTREMEKLERSLGGIKDLGGIPDVIFVVDIGHERNAVREAHTLQLPIIGV 185
Query: 211 VDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
VDSN NP I Y + GNDD+ AI YY + A+L+ KA T K+ EK
Sbjct: 186 VDSNHNPEGIDYMIAGNDDSIRAISYYTREIANAVLEA-KASISTKKVSKEK 236
>gi|126173688|ref|YP_001049837.1| 30S ribosomal protein S2 [Shewanella baltica OS155]
gi|152999977|ref|YP_001365658.1| 30S ribosomal protein S2 [Shewanella baltica OS185]
gi|160874598|ref|YP_001553914.1| 30S ribosomal protein S2 [Shewanella baltica OS195]
gi|217974060|ref|YP_002358811.1| 30S ribosomal protein S2 [Shewanella baltica OS223]
gi|373948848|ref|ZP_09608809.1| ribosomal protein S2 [Shewanella baltica OS183]
gi|378707850|ref|YP_005272744.1| 30S ribosomal protein S2 [Shewanella baltica OS678]
gi|386325311|ref|YP_006021428.1| 30S ribosomal protein S2 [Shewanella baltica BA175]
gi|386340446|ref|YP_006036812.1| 30S ribosomal protein S2 [Shewanella baltica OS117]
gi|418023472|ref|ZP_12662457.1| ribosomal protein S2 [Shewanella baltica OS625]
gi|166226751|sp|A3D2K5.1|RS2_SHEB5 RecName: Full=30S ribosomal protein S2
gi|166226752|sp|A6WLA6.1|RS2_SHEB8 RecName: Full=30S ribosomal protein S2
gi|189044997|sp|A9KUK5.1|RS2_SHEB9 RecName: Full=30S ribosomal protein S2
gi|254764489|sp|B8E7R6.1|RS2_SHEB2 RecName: Full=30S ribosomal protein S2
gi|125996893|gb|ABN60968.1| SSU ribosomal protein S2P [Shewanella baltica OS155]
gi|151364595|gb|ABS07595.1| ribosomal protein S2 [Shewanella baltica OS185]
gi|160860120|gb|ABX48654.1| ribosomal protein S2 [Shewanella baltica OS195]
gi|217499195|gb|ACK47388.1| ribosomal protein S2 [Shewanella baltica OS223]
gi|315266839|gb|ADT93692.1| ribosomal protein S2 [Shewanella baltica OS678]
gi|333819456|gb|AEG12122.1| ribosomal protein S2 [Shewanella baltica BA175]
gi|334862847|gb|AEH13318.1| ribosomal protein S2 [Shewanella baltica OS117]
gi|353537355|gb|EHC06912.1| ribosomal protein S2 [Shewanella baltica OS625]
gi|373885448|gb|EHQ14340.1| ribosomal protein S2 [Shewanella baltica OS183]
Length = 242
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 108/233 (46%), Gaps = 45/233 (19%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R G I +L+ + + +AL F++++A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG I+++A C +F W GM TN + + +++ RL +L
Sbjct: 64 KGKVLFVGTKRAAGEAIKESALSCDQFYVDHRWLGGMLTNWKTVRQSIKRLKELESQSVD 123
Query: 181 -----------VILTNTLTTVLEP----------------------NPAIGEAAKMCIPT 207
++ T L + + + AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK------KAKQD 254
V +VD+N P+ + Y VPGNDD AI+ Y A G+ +A+QD
Sbjct: 184 VAVVDTNSAPDGVNYIVPGNDDAMRAIRLYTSSVAAAAKAGRGQDLAVQAEQD 236
>gi|21672506|ref|NP_660573.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|25009196|sp|Q8K9T0.1|RS2_BUCAP RecName: Full=30S ribosomal protein S2
gi|21623126|gb|AAM67784.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 244
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 109/239 (45%), Gaps = 39/239 (16%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++DM A VH GH+ + +MKP+I+G R I +L+++ + AL+ + I+
Sbjct: 3 IVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGSRNKVHIINLEKTLPMFNFALSELKKISL 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI--- 182
+ G +LFVG S I++TA +C +F W GM TN + + +++ RL DL
Sbjct: 63 KKGKILFVGTKRAASKKIKETALNCNQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETESQ 122
Query: 183 ---------------------LTNTLTTV---------------LEPNPAIGEAAKMCIP 206
L N+L + N AI EA + IP
Sbjct: 123 DGTFSKITKKEALIRTRELSKLENSLGGIKNMGGLPDCLFVIDAAHENIAIKEANNLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEV 265
IVD+N NP+ + Y +PGNDD ++ Y Q +I K + + LL +++
Sbjct: 183 VFAIVDTNSNPDGVDYVIPGNDDAIRSVTLYLQAVSLSICKNQNGNSFSEMLLDSDKKM 241
>gi|123443485|ref|YP_001007458.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332160592|ref|YP_004297169.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386311545|ref|YP_006007601.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418242624|ref|ZP_12869131.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|420259720|ref|ZP_14762419.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|433547820|ref|ZP_20503871.1| SSU ribosomal protein S2p (SAe) [Yersinia enterocolitica IP 10393]
gi|166226768|sp|A1JP82.1|RS2_YERE8 RecName: Full=30S ribosomal protein S2
gi|122090446|emb|CAL13314.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318606930|emb|CBY28428.1| SSU ribosomal protein S2p (SAe) [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664822|gb|ADZ41466.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330859599|emb|CBX69939.1| 30S ribosomal protein S2 [Yersinia enterocolitica W22703]
gi|351777958|gb|EHB20140.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|404512813|gb|EKA26649.1| 30S ribosomal protein S2 [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|431791246|emb|CCO66911.1| SSU ribosomal protein S2p (SAe) [Yersinia enterocolitica IP 10393]
Length = 241
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ L +AL + I+ R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPLFNEALAELKKISSR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A +C +F W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A++ Y A+ +G+
Sbjct: 184 FSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLNAVADAVKEGR 225
>gi|407769005|ref|ZP_11116382.1| 30S ribosomal protein S2 [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407287925|gb|EKF13404.1| 30S ribosomal protein S2 [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 260
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 46/222 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + +MK +I+G R I +L ++ +L A+ V + G
Sbjct: 8 MRQLMEAGVHFGHHTRRWNPKMKQFIFGARNDIHILNLQETVPMLHRAMQAVRDVTAGGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S +I + A+ C ++ W GM TN
Sbjct: 68 RVLFVGTKRQASPVIAEAAKRCGQYYVNHRWLGGMLTNWNTVSNSIKRLKEQEEILSAGA 127
Query: 167 --------------SEKLFRAVTR------LPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
+KL RA+ LPD++++ +T L A+ EA + IP
Sbjct: 128 EGLTKKEILNLTRSRDKLERALGGIKDMGGLPDIIVVVDTNKEAL----AVHEAKNLNIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
V I+D+N +P + YP+PGNDD AIQ YC +F A+L G
Sbjct: 184 VVAILDTNSDPANVAYPIPGNDDAIRAIQLYCDLFVGAVLDG 225
>gi|344940506|ref|ZP_08779794.1| ribosomal protein S2 [Methylobacter tundripaludum SV96]
gi|344261698|gb|EGW21969.1| ribosomal protein S2 [Methylobacter tundripaludum SV96]
Length = 245
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 50/230 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M Y++G R I DL+++ + DA+N++ +
Sbjct: 4 VSMRQMLEAGVHFGHQTRYWNPKMATYLFGSRNKIHIIDLEKTLPMFNDAMNYLGQMTAN 63
Query: 127 DGIVLFVG-QSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL-------- 177
G VLFVG + A ++ E+ A+ + + R W GM TN + + +++ RL
Sbjct: 64 KGTVLFVGTKKAARKVVAEEAARCGMPYVNHR-WLGGMLTNFKTIKKSINRLKELEAMKA 122
Query: 178 ------------------------------------PDLVILTNTLTTVLEPNPAIGEAA 201
PD++ + L E N AI EA
Sbjct: 123 DGTLYQRFAKKEALGMERELEKLERSLGGIKDMKGVPDVIFI---LDVGYEKN-AISEAK 178
Query: 202 KMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
K+ IP VGIVDSN +P I Y +PGNDD+ A++ YC+ A+++ K A
Sbjct: 179 KLGIPVVGIVDSNNSPEKIDYIIPGNDDSIRAVKLYCESVSAAVMEAKSA 228
>gi|258516355|ref|YP_003192577.1| 30S ribosomal protein S2 [Desulfotomaculum acetoxidans DSM 771]
gi|257780060|gb|ACV63954.1| ribosomal protein S2 [Desulfotomaculum acetoxidans DSM 771]
Length = 248
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 39/224 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K + ++ VH GH+ + +M PYI+ R G I DL ++ +++ A NF+ +A
Sbjct: 22 MKQLLESGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTVKMVDVAYNFIKDLALSGE 81
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLT 188
+LFVG Q +++ A+ C F + W GM TN + + + + RL +L + T
Sbjct: 82 TLLFVGTKKQAQESVKEEAEKCGMFYVNQRWLGGMLTNFQTIRKRIDRLHELDRMEADGT 141
Query: 189 TVLEPNP---------------------------------------AIGEAAKMCIPTVG 209
L P A+ EA K+ IP V
Sbjct: 142 FSLLPKKEVAELMHEKERLQKFLGGIKEMKRLPAALFVVDPRKERIAVAEARKLGIPIVA 201
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
IVD+NC+P+ I Y +PGNDD A++ A+L+GK+ +Q
Sbjct: 202 IVDTNCDPDEIDYIIPGNDDAIRAVRLLTSKMAEAVLEGKQGEQ 245
>gi|218288324|ref|ZP_03492623.1| ribosomal protein S2 [Alicyclobacillus acidocaldarius LAA1]
gi|258511400|ref|YP_003184834.1| 30S ribosomal protein S2 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|384135100|ref|YP_005517814.1| 30S ribosomal protein S2 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|218241683|gb|EED08856.1| ribosomal protein S2 [Alicyclobacillus acidocaldarius LAA1]
gi|257478126|gb|ACV58445.1| ribosomal protein S2 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|339289185|gb|AEJ43295.1| ribosomal protein S2 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 233
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 104/229 (45%), Gaps = 39/229 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M YI+ R G I DL ++ + +A NFV +A
Sbjct: 3 IISMKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVRKVEEAYNFVRDLAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
G VLFVG Q +++ A+ C F + W G TN + + + RL +L
Sbjct: 63 SGGTVLFVGTKKQAQEAVKEEAERCGMFYVNQRWLGGTLTNFNTIQKRIRRLQELEQMEE 122
Query: 181 -----------VILTNTLTTVLE------------PNP-----------AIGEAAKMCIP 206
VIL LE P+ A+ EA K+ IP
Sbjct: 123 DGTFEVLPKKEVILLRKERERLEKFLGGIKGMKKLPDALFIIDPRKERIAVAEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V IVD+NC+P+ I Y +PGNDD A++ A+L+G + ++T
Sbjct: 183 IVAIVDTNCDPDEIDYVIPGNDDAIRAVRLLTSKIADAVLEGTQGGEET 231
>gi|410584558|ref|ZP_11321660.1| ribosomal protein S2 [Thermaerobacter subterraneus DSM 13965]
gi|410504144|gb|EKP93656.1| ribosomal protein S2 [Thermaerobacter subterraneus DSM 13965]
Length = 233
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 100/227 (44%), Gaps = 39/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M+PYI+ R G I DL ++ LL +A +FV +
Sbjct: 3 VVAMKQLLEAGVHFGHQTRRWNPKMRPYIFMERNGIYIIDLQKTVRLLDEAYHFVRELVA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
+ G +LFVG Q I + A C EF W G TN + + RL +L +
Sbjct: 63 QGGRILFVGTKKQAREAIAEEATRCGEFYINERWLGGTLTNFATIRTRIDRLAELEQMEA 122
Query: 186 T------------------------------------LTTVLEPNP---AIGEAAKMCIP 206
V++P A+ EA K+ IP
Sbjct: 123 EGHFDRLPKKEVARLLREKEKLEKYLGGIKGMKDLPDAVYVVDPRKEKIAVSEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V IVD+NC+P + Y +PGNDD A++ A+L+GK+ Q
Sbjct: 183 VVAIVDTNCDPEEVDYVIPGNDDAIRAVRLITGKIADAVLEGKQGVQ 229
>gi|312898659|ref|ZP_07758049.1| ribosomal protein S2 [Megasphaera micronuciformis F0359]
gi|310620578|gb|EFQ04148.1| ribosomal protein S2 [Megasphaera micronuciformis F0359]
Length = 284
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 39/226 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M +I+ R G I DL ++ + L +A NF +A
Sbjct: 15 VVSMKQLLEAGVHFGHQTRRWNPKMSRFIFTERNGIYIIDLQKTVKKLDEAYNFARDLAS 74
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL-------- 177
G VLFVG Q I+ A+ C F W GM TN + + + V RL
Sbjct: 75 EGGKVLFVGTKKQAQESIKNEAERCGMFFVNERWLGGMLTNFQTIEKRVKRLKTLEKQAE 134
Query: 178 ---------PDLVILTNTLTT-------------------VLEPNP---AIGEAAKMCIP 206
++ +L + + V++P AI EA K+ IP
Sbjct: 135 DGTFDVLPKKEVTLLKHEMEKLQKYLGGIKEMKKVPDALFVIDPKKEEIAIAEARKLNIP 194
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
+ VD+NC+P+LI YP+P NDD A++ AI++G++ +
Sbjct: 195 IIATVDTNCDPDLIDYPIPANDDAIRAVKLLTGKIADAIMEGRQGE 240
>gi|157364248|ref|YP_001471015.1| 30S ribosomal protein S2 [Thermotoga lettingae TMO]
gi|167011239|sp|A8F717.1|RS2_THELT RecName: Full=30S ribosomal protein S2
gi|157314852|gb|ABV33951.1| ribosomal protein S2 [Thermotoga lettingae TMO]
Length = 266
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 47/229 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M PYIYG R+G I DL ++ +L+ +A +FV A
Sbjct: 3 VITMKQLLEAGVHFGHRTRRWNPKMAPYIYGARKGIYIIDLQKTLKLVEEACDFVKSKAS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS------------------ 167
++FVG Q ++++ A C F W G+ TN
Sbjct: 63 EGATMIFVGTKKQAQHVVKEEAGKCGAFYVNNRWLGGLITNFKTIKPRIDKLIELEEMEK 122
Query: 168 -------------------EKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL +A+ R+PD++ + + + A+ EA K
Sbjct: 123 NGELAKLPKKEQSRLRKALEKLRKNLGGLKAMDRIPDIIYVIDPRKERI----AVAEANK 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
M IP +G+VD+NC+P+ + + +P NDD +I+ A L+G++
Sbjct: 179 MGIPVIGVVDTNCDPDPVDFVIPANDDAIRSIKLITSKIAEAYLEGREG 227
>gi|95928708|ref|ZP_01311454.1| ribosomal protein S2 [Desulfuromonas acetoxidans DSM 684]
gi|95135053|gb|EAT16706.1| ribosomal protein S2 [Desulfuromonas acetoxidans DSM 684]
Length = 256
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K + +A VH GH+ + +MKPYI+G R G I DL ++ R A NFV +
Sbjct: 4 VTMKQLLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQRTVRYFRSAYNFVKSVVEN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
+LFVG Q I + A ++ W GM TN + ++ RL + ++
Sbjct: 64 GDSILFVGTKKQAQDSIREEADRAGQYYVNHRWLGGMLTNFATIKGSIDRLKKIETMSED 123
Query: 187 LT------------------------------------TVLEPNP---AIGEAAKMCIPT 207
T V++P A+ EA K+ IP
Sbjct: 124 GTFELLTKKECLQLDRERIKLEKNLGGIKGMTKLPGAMFVIDPKKEAIAVCEAKKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTL 256
V +VD+NC+P+ I Y +PGNDD AI+ + A ++G +A++ +
Sbjct: 184 VAVVDTNCDPDEIDYIIPGNDDAIRAIRLFVSSMADASIEGAQAREAAI 232
>gi|251790745|ref|YP_003005466.1| 30S ribosomal protein S2 [Dickeya zeae Ech1591]
gi|247539366|gb|ACT07987.1| ribosomal protein S2 [Dickeya zeae Ech1591]
Length = 241
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL ++ I+ R
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKISSR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A +C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQAQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALLRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + Y +PGNDD A+ Y A+ +G+
Sbjct: 184 FAIVDTNSDPDGVDYIIPGNDDAIRAVSLYLSAVAAAVREGR 225
>gi|315499829|ref|YP_004088632.1| 30S ribosomal protein S2 [Asticcacaulis excentricus CB 48]
gi|315417841|gb|ADU14481.1| ribosomal protein S2 [Asticcacaulis excentricus CB 48]
Length = 255
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 104/224 (46%), Gaps = 37/224 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++ + +A H GH+ + +M+ Y++G R I DL Q+ LL AL V +A
Sbjct: 6 LSMRALLEAGAHFGHQTHRWNPKMERYLFGSRSNIHIIDLSQTLPLLHQALLKVREVAAN 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLV----- 181
G VLFVG Q + + A+ ++ W G TN + ++ RL +L
Sbjct: 66 GGRVLFVGTKRQAAGPVAVAAKRSAQYYVNHRWLGGTLTNWRTISGSIARLRELEQVMEN 125
Query: 182 --------ILTNT---------------------LTTVLEPNP---AIGEAAKMCIPTVG 209
+LT T L V++ N AI EA K+ IP +G
Sbjct: 126 PVGRSKKELLTLTRERDKLELSLGGIKDMGGIPDLMFVIDTNKEAIAIQEARKLNIPVIG 185
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
I+DSN +P+ IT+PVPGNDD A+Q YC + A+L G A Q
Sbjct: 186 ILDSNSDPDGITFPVPGNDDAARALQLYCDLIADAVLDGLAAGQ 229
>gi|262278376|ref|ZP_06056161.1| 30S ribosomal protein S2 [Acinetobacter calcoaceticus RUH2202]
gi|262258727|gb|EEY77460.1| 30S ribosomal protein S2 [Acinetobacter calcoaceticus RUH2202]
Length = 250
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 98/226 (43%), Gaps = 39/226 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++D+ A H GH+ + +M+ YI+G R I +L+ + L DALNF +A +
Sbjct: 6 VSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFANQLASK 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
VLFVG S +I + AQ + W GM TN + L +++ RL DL +
Sbjct: 66 KNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQD 125
Query: 187 LT---------------------------------------TVLEPNPAIGEAAKMCIPT 207
T V + AI EA + IP
Sbjct: 126 GTFAKLTKREALERTREMEKLERALGGVKNMGGLPDALFVIDVDHESIAIKEAKNLGIPV 185
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+GIVD+N NP+ + Y +PGNDD A+ Y AIL GK+ Q
Sbjct: 186 IGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQ 231
>gi|294503061|ref|YP_003567123.1| 30S ribosomal protein S2 [Yersinia pestis Z176003]
gi|420556478|ref|ZP_15053368.1| ribosomal protein S2 [Yersinia pestis PY-03]
gi|420572757|ref|ZP_15067949.1| ribosomal protein S2 [Yersinia pestis PY-06]
gi|420578089|ref|ZP_15072775.1| ribosomal protein S2 [Yersinia pestis PY-07]
gi|420588575|ref|ZP_15082268.1| ribosomal protein S2 [Yersinia pestis PY-09]
gi|420593893|ref|ZP_15087062.1| ribosomal protein S2 [Yersinia pestis PY-10]
gi|420599576|ref|ZP_15092143.1| ribosomal protein S2 [Yersinia pestis PY-11]
gi|420626171|ref|ZP_15115923.1| ribosomal protein S2 [Yersinia pestis PY-16]
gi|420631355|ref|ZP_15120615.1| ribosomal protein S2 [Yersinia pestis PY-19]
gi|420647185|ref|ZP_15134931.1| ribosomal protein S2 [Yersinia pestis PY-32]
gi|420658347|ref|ZP_15144960.1| ribosomal protein S2 [Yersinia pestis PY-36]
gi|420673946|ref|ZP_15159051.1| ribosomal protein S2 [Yersinia pestis PY-46]
gi|420695722|ref|ZP_15178452.1| ribosomal protein S2 [Yersinia pestis PY-53]
gi|420701098|ref|ZP_15183055.1| ribosomal protein S2 [Yersinia pestis PY-54]
gi|420712420|ref|ZP_15192725.1| ribosomal protein S2 [Yersinia pestis PY-56]
gi|420717824|ref|ZP_15197462.1| ribosomal protein S2 [Yersinia pestis PY-58]
gi|420734104|ref|ZP_15211858.1| ribosomal protein S2 [Yersinia pestis PY-61]
gi|420739575|ref|ZP_15216789.1| ribosomal protein S2 [Yersinia pestis PY-63]
gi|420744910|ref|ZP_15221487.1| ribosomal protein S2 [Yersinia pestis PY-64]
gi|420750701|ref|ZP_15226438.1| ribosomal protein S2 [Yersinia pestis PY-65]
gi|420755966|ref|ZP_15231012.1| ribosomal protein S2 [Yersinia pestis PY-66]
gi|420761832|ref|ZP_15235795.1| ribosomal protein S2 [Yersinia pestis PY-71]
gi|420767063|ref|ZP_15240515.1| ribosomal protein S2 [Yersinia pestis PY-72]
gi|420772052|ref|ZP_15244996.1| ribosomal protein S2 [Yersinia pestis PY-76]
gi|420804284|ref|ZP_15273746.1| ribosomal protein S2 [Yersinia pestis PY-93]
gi|420820413|ref|ZP_15288298.1| ribosomal protein S2 [Yersinia pestis PY-96]
gi|420825510|ref|ZP_15292853.1| ribosomal protein S2 [Yersinia pestis PY-98]
gi|420836132|ref|ZP_15302446.1| ribosomal protein S2 [Yersinia pestis PY-100]
gi|420852311|ref|ZP_15316949.1| ribosomal protein S2 [Yersinia pestis PY-103]
gi|420857825|ref|ZP_15321639.1| ribosomal protein S2 [Yersinia pestis PY-113]
gi|294353520|gb|ADE63861.1| 30S ribosomal protein S2 [Yersinia pestis Z176003]
gi|391433529|gb|EIQ94856.1| ribosomal protein S2 [Yersinia pestis PY-03]
gi|391450717|gb|EIR10318.1| ribosomal protein S2 [Yersinia pestis PY-06]
gi|391462291|gb|EIR20818.1| ribosomal protein S2 [Yersinia pestis PY-07]
gi|391465597|gb|EIR23776.1| ribosomal protein S2 [Yersinia pestis PY-09]
gi|391479015|gb|EIR35857.1| ribosomal protein S2 [Yersinia pestis PY-10]
gi|391480123|gb|EIR36828.1| ribosomal protein S2 [Yersinia pestis PY-11]
gi|391510221|gb|EIR63778.1| ribosomal protein S2 [Yersinia pestis PY-16]
gi|391510965|gb|EIR64420.1| ribosomal protein S2 [Yersinia pestis PY-19]
gi|391529446|gb|EIR81130.1| ribosomal protein S2 [Yersinia pestis PY-32]
gi|391542259|gb|EIR92734.1| ribosomal protein S2 [Yersinia pestis PY-36]
gi|391559085|gb|EIS07900.1| ribosomal protein S2 [Yersinia pestis PY-46]
gi|391574852|gb|EIS21679.1| ribosomal protein S2 [Yersinia pestis PY-53]
gi|391587214|gb|EIS32409.1| ribosomal protein S2 [Yersinia pestis PY-54]
gi|391590190|gb|EIS34974.1| ribosomal protein S2 [Yersinia pestis PY-56]
gi|391603935|gb|EIS47050.1| ribosomal protein S2 [Yersinia pestis PY-58]
gi|391617996|gb|EIS59484.1| ribosomal protein S2 [Yersinia pestis PY-61]
gi|391618552|gb|EIS59954.1| ribosomal protein S2 [Yersinia pestis PY-63]
gi|391625565|gb|EIS66039.1| ribosomal protein S2 [Yersinia pestis PY-64]
gi|391629627|gb|EIS69529.1| ribosomal protein S2 [Yersinia pestis PY-65]
gi|391641022|gb|EIS79498.1| ribosomal protein S2 [Yersinia pestis PY-71]
gi|391643629|gb|EIS81781.1| ribosomal protein S2 [Yersinia pestis PY-72]
gi|391643721|gb|EIS81858.1| ribosomal protein S2 [Yersinia pestis PY-66]
gi|391653267|gb|EIS90249.1| ribosomal protein S2 [Yersinia pestis PY-76]
gi|391684243|gb|EIT17941.1| ribosomal protein S2 [Yersinia pestis PY-93]
gi|391701916|gb|EIT33865.1| ribosomal protein S2 [Yersinia pestis PY-96]
gi|391702857|gb|EIT34693.1| ribosomal protein S2 [Yersinia pestis PY-98]
gi|391718718|gb|EIT48935.1| ribosomal protein S2 [Yersinia pestis PY-100]
gi|391732822|gb|EIT61340.1| ribosomal protein S2 [Yersinia pestis PY-103]
gi|391736475|gb|EIT64493.1| ribosomal protein S2 [Yersinia pestis PY-113]
Length = 236
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 105/220 (47%), Gaps = 39/220 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL + I+ R G
Sbjct: 1 MRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKISSRKG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI------ 182
+LFVG S +++ A +C +F W GM TN + + +++ RL DL I
Sbjct: 61 KILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGT 120
Query: 183 ------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPTVG 209
L N+L + + P+ AI EA + IP
Sbjct: 121 FDKLTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFS 180
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A++ Y TA+ +G+
Sbjct: 181 IVDTNSDPDGVDFIIPGNDDAIRAVKLYLGAVATAVREGR 220
>gi|406706152|ref|YP_006756505.1| 30S ribosomal protein S2 [alpha proteobacterium HIMB5]
gi|406651928|gb|AFS47328.1| ribosomal protein S2 [alpha proteobacterium HIMB5]
Length = 267
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 100/219 (45%), Gaps = 46/219 (21%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VHLGHK + +MK YI+G R I DL Q+ EL + AL V +G
Sbjct: 8 IQQLLEAGVHLGHKTLRWNPKMKKYIFGKRDSIHIIDLTQTLELTKVALEKVYSTIANNG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
+LFV Q S I + A++ ++ W GM TN
Sbjct: 68 KILFVSTKKQASEAIAEVAKETDQYFVNYRWLGGMLTNWGTISNSIKKLKKLETDLTSEN 127
Query: 167 --------------SEKLFRA------VTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
+KL R+ + ++PDLV + +T L AI E+ K+ IP
Sbjct: 128 RGFTKKELLKMSVMKDKLQRSLGGIAEMKKVPDLVFIIDTNYESL----AIQESVKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAI 245
+ I+DSN NP+ I +P+PGNDD +I YC + K I
Sbjct: 184 IIAILDSNSNPDGIDFPIPGNDDARRSIDLYCNLIKETI 222
>gi|169632956|ref|YP_001706692.1| 30S ribosomal protein S2 [Acinetobacter baumannii SDF]
gi|169795290|ref|YP_001713083.1| 30S ribosomal protein S2 [Acinetobacter baumannii AYE]
gi|184158845|ref|YP_001847184.1| 30S ribosomal protein S2 [Acinetobacter baumannii ACICU]
gi|213158045|ref|YP_002320096.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB0057]
gi|215482823|ref|YP_002325026.1| ribosomal protein S2 [Acinetobacter baumannii AB307-0294]
gi|239502457|ref|ZP_04661767.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB900]
gi|260554200|ref|ZP_05826457.1| ribosomal protein S2 [Acinetobacter sp. RUH2624]
gi|260556753|ref|ZP_05828971.1| ribosomal protein S2 [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|301345999|ref|ZP_07226740.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB056]
gi|301513133|ref|ZP_07238370.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB058]
gi|301595621|ref|ZP_07240629.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB059]
gi|384131123|ref|YP_005513735.1| rpsB [Acinetobacter baumannii 1656-2]
gi|385238258|ref|YP_005799597.1| 30S ribosomal protein S2 [Acinetobacter baumannii TCDC-AB0715]
gi|387123223|ref|YP_006289105.1| 30S ribosomal protein S2 [Acinetobacter baumannii MDR-TJ]
gi|403674256|ref|ZP_10936520.1| 30S ribosomal protein S2 [Acinetobacter sp. NCTC 10304]
gi|407933467|ref|YP_006849110.1| 30S ribosomal protein S2 [Acinetobacter baumannii TYTH-1]
gi|416147411|ref|ZP_11601789.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB210]
gi|417546661|ref|ZP_12197747.1| ribosomal protein S2 [Acinetobacter baumannii OIFC032]
gi|417549055|ref|ZP_12200135.1| ribosomal protein S2 [Acinetobacter baumannii Naval-18]
gi|417552501|ref|ZP_12203571.1| ribosomal protein S2 [Acinetobacter baumannii Naval-81]
gi|417561675|ref|ZP_12212554.1| ribosomal protein S2 [Acinetobacter baumannii OIFC137]
gi|417567272|ref|ZP_12218144.1| ribosomal protein S2 [Acinetobacter baumannii OIFC143]
gi|417569385|ref|ZP_12220243.1| ribosomal protein S2 [Acinetobacter baumannii OIFC189]
gi|417571889|ref|ZP_12222743.1| ribosomal protein S2 [Acinetobacter baumannii Canada BC-5]
gi|417577818|ref|ZP_12228655.1| ribosomal protein S2 [Acinetobacter baumannii Naval-17]
gi|417869156|ref|ZP_12514151.1| 30S ribosomal protein S2 [Acinetobacter baumannii ABNIH1]
gi|417874120|ref|ZP_12518979.1| 30S ribosomal protein S2 [Acinetobacter baumannii ABNIH2]
gi|417879425|ref|ZP_12523996.1| 30S ribosomal protein S2 [Acinetobacter baumannii ABNIH3]
gi|417882483|ref|ZP_12526780.1| 30S ribosomal protein S2 [Acinetobacter baumannii ABNIH4]
gi|421198207|ref|ZP_15655374.1| ribosomal protein S2 [Acinetobacter baumannii OIFC109]
gi|421204011|ref|ZP_15661142.1| 30S ribosomal protein S2 [Acinetobacter baumannii AC12]
gi|421457274|ref|ZP_15906611.1| ribosomal protein S2 [Acinetobacter baumannii IS-123]
gi|421534568|ref|ZP_15980840.1| 30S ribosomal protein S2 [Acinetobacter baumannii AC30]
gi|421620334|ref|ZP_16061271.1| ribosomal protein S2 [Acinetobacter baumannii OIFC074]
gi|421626240|ref|ZP_16067069.1| ribosomal protein S2 [Acinetobacter baumannii OIFC098]
gi|421628397|ref|ZP_16069180.1| ribosomal protein S2 [Acinetobacter baumannii OIFC180]
gi|421632126|ref|ZP_16072788.1| ribosomal protein S2 [Acinetobacter baumannii Naval-13]
gi|421641541|ref|ZP_16082078.1| ribosomal protein S2 [Acinetobacter baumannii IS-235]
gi|421646476|ref|ZP_16086926.1| ribosomal protein S2 [Acinetobacter baumannii IS-251]
gi|421651752|ref|ZP_16092119.1| ribosomal protein S2 [Acinetobacter baumannii OIFC0162]
gi|421654084|ref|ZP_16094415.1| ribosomal protein S2 [Acinetobacter baumannii Naval-72]
gi|421660369|ref|ZP_16100569.1| ribosomal protein S2 [Acinetobacter baumannii Naval-83]
gi|421664113|ref|ZP_16104253.1| ribosomal protein S2 [Acinetobacter baumannii OIFC110]
gi|421668353|ref|ZP_16108392.1| ribosomal protein S2 [Acinetobacter baumannii OIFC087]
gi|421671761|ref|ZP_16111731.1| ribosomal protein S2 [Acinetobacter baumannii OIFC099]
gi|421674780|ref|ZP_16114709.1| ribosomal protein S2 [Acinetobacter baumannii OIFC065]
gi|421677943|ref|ZP_16117832.1| ribosomal protein S2 [Acinetobacter baumannii OIFC111]
gi|421686206|ref|ZP_16125961.1| ribosomal protein S2 [Acinetobacter baumannii IS-143]
gi|421691700|ref|ZP_16131359.1| ribosomal protein S2 [Acinetobacter baumannii IS-116]
gi|421697510|ref|ZP_16137073.1| ribosomal protein S2 [Acinetobacter baumannii WC-692]
gi|421697814|ref|ZP_16137359.1| ribosomal protein S2 [Acinetobacter baumannii IS-58]
gi|421704011|ref|ZP_16143461.1| 30S ribosomal protein S2 [Acinetobacter baumannii ZWS1122]
gi|421707965|ref|ZP_16147346.1| 30S ribosomal protein S2 [Acinetobacter baumannii ZWS1219]
gi|421786977|ref|ZP_16223355.1| ribosomal protein S2 [Acinetobacter baumannii Naval-82]
gi|421794342|ref|ZP_16230443.1| ribosomal protein S2 [Acinetobacter baumannii Naval-2]
gi|421795450|ref|ZP_16231533.1| ribosomal protein S2 [Acinetobacter baumannii Naval-21]
gi|421798824|ref|ZP_16234834.1| ribosomal protein S2 [Acinetobacter baumannii Canada BC1]
gi|421804513|ref|ZP_16240423.1| ribosomal protein S2 [Acinetobacter baumannii WC-A-694]
gi|421806701|ref|ZP_16242563.1| ribosomal protein S2 [Acinetobacter baumannii OIFC035]
gi|424051650|ref|ZP_17789182.1| 30S ribosomal protein S2 [Acinetobacter baumannii Ab11111]
gi|424054890|ref|ZP_17792414.1| 30S ribosomal protein S2 [Acinetobacter nosocomialis Ab22222]
gi|424059270|ref|ZP_17796761.1| 30S ribosomal protein S2 [Acinetobacter baumannii Ab33333]
gi|424063201|ref|ZP_17800686.1| 30S ribosomal protein S2 [Acinetobacter baumannii Ab44444]
gi|425739570|ref|ZP_18857769.1| ribosomal protein S2 [Acinetobacter baumannii WC-487]
gi|425750274|ref|ZP_18868241.1| ribosomal protein S2 [Acinetobacter baumannii WC-348]
gi|425753412|ref|ZP_18871296.1| ribosomal protein S2 [Acinetobacter baumannii Naval-113]
gi|445400634|ref|ZP_21430105.1| ribosomal protein S2 [Acinetobacter baumannii Naval-57]
gi|445436691|ref|ZP_21440696.1| ribosomal protein S2 [Acinetobacter baumannii OIFC021]
gi|445449337|ref|ZP_21444259.1| ribosomal protein S2 [Acinetobacter baumannii WC-A-92]
gi|445460064|ref|ZP_21447973.1| ribosomal protein S2 [Acinetobacter baumannii OIFC047]
gi|445473959|ref|ZP_21453071.1| ribosomal protein S2 [Acinetobacter baumannii OIFC338]
gi|445477425|ref|ZP_21454341.1| ribosomal protein S2 [Acinetobacter baumannii Naval-78]
gi|445492110|ref|ZP_21460057.1| ribosomal protein S2 [Acinetobacter baumannii AA-014]
gi|169148217|emb|CAM86080.1| 30S ribosomal protein S2 [Acinetobacter baumannii AYE]
gi|169151748|emb|CAP00552.1| 30S ribosomal protein S2 [Acinetobacter baumannii]
gi|183210439|gb|ACC57837.1| 30S ribosomal protein S2 [Acinetobacter baumannii ACICU]
gi|213057205|gb|ACJ42107.1| ribosomal protein S2 [Acinetobacter baumannii AB0057]
gi|213986068|gb|ACJ56367.1| ribosomal protein S2 [Acinetobacter baumannii AB307-0294]
gi|260404671|gb|EEW98184.1| ribosomal protein S2 [Acinetobacter sp. RUH2624]
gi|260410012|gb|EEX03312.1| ribosomal protein S2 [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|322507343|gb|ADX02797.1| rpsB [Acinetobacter baumannii 1656-2]
gi|323518758|gb|ADX93139.1| 30S ribosomal protein S2 [Acinetobacter baumannii TCDC-AB0715]
gi|333365642|gb|EGK47656.1| 30S ribosomal protein S2 [Acinetobacter baumannii AB210]
gi|342228677|gb|EGT93557.1| 30S ribosomal protein S2 [Acinetobacter baumannii ABNIH3]
gi|342229874|gb|EGT94724.1| 30S ribosomal protein S2 [Acinetobacter baumannii ABNIH2]
gi|342231563|gb|EGT96372.1| 30S ribosomal protein S2 [Acinetobacter baumannii ABNIH1]
gi|342237844|gb|EGU02297.1| 30S ribosomal protein S2 [Acinetobacter baumannii ABNIH4]
gi|385877715|gb|AFI94810.1| ribosomal protein S2 [Acinetobacter baumannii MDR-TJ]
gi|395524257|gb|EJG12346.1| ribosomal protein S2 [Acinetobacter baumannii OIFC137]
gi|395552944|gb|EJG18952.1| ribosomal protein S2 [Acinetobacter baumannii OIFC143]
gi|395553608|gb|EJG19614.1| ribosomal protein S2 [Acinetobacter baumannii OIFC189]
gi|395566175|gb|EJG27820.1| ribosomal protein S2 [Acinetobacter baumannii OIFC109]
gi|395568515|gb|EJG29185.1| ribosomal protein S2 [Acinetobacter baumannii Naval-17]
gi|398326552|gb|EJN42699.1| 30S ribosomal protein S2 [Acinetobacter baumannii AC12]
gi|400206998|gb|EJO37969.1| ribosomal protein S2 [Acinetobacter baumannii IS-123]
gi|400207457|gb|EJO38427.1| ribosomal protein S2 [Acinetobacter baumannii Canada BC-5]
gi|400384549|gb|EJP43227.1| ribosomal protein S2 [Acinetobacter baumannii OIFC032]
gi|400387023|gb|EJP50096.1| ribosomal protein S2 [Acinetobacter baumannii Naval-18]
gi|400392760|gb|EJP59806.1| ribosomal protein S2 [Acinetobacter baumannii Naval-81]
gi|404558271|gb|EKA63555.1| ribosomal protein S2 [Acinetobacter baumannii WC-692]
gi|404562309|gb|EKA67533.1| ribosomal protein S2 [Acinetobacter baumannii IS-116]
gi|404568808|gb|EKA73903.1| ribosomal protein S2 [Acinetobacter baumannii IS-143]
gi|404573240|gb|EKA78279.1| ribosomal protein S2 [Acinetobacter baumannii IS-58]
gi|404665206|gb|EKB33169.1| 30S ribosomal protein S2 [Acinetobacter baumannii Ab11111]
gi|404670008|gb|EKB37900.1| 30S ribosomal protein S2 [Acinetobacter baumannii Ab33333]
gi|404674769|gb|EKB42505.1| 30S ribosomal protein S2 [Acinetobacter baumannii Ab44444]
gi|407191058|gb|EKE62269.1| 30S ribosomal protein S2 [Acinetobacter baumannii ZWS1219]
gi|407191180|gb|EKE62390.1| 30S ribosomal protein S2 [Acinetobacter baumannii ZWS1122]
gi|407439639|gb|EKF46164.1| 30S ribosomal protein S2 [Acinetobacter nosocomialis Ab22222]
gi|407902048|gb|AFU38879.1| 30S ribosomal protein S2 [Acinetobacter baumannii TYTH-1]
gi|408507685|gb|EKK09379.1| ribosomal protein S2 [Acinetobacter baumannii OIFC0162]
gi|408511934|gb|EKK13581.1| ribosomal protein S2 [Acinetobacter baumannii Naval-72]
gi|408515087|gb|EKK16683.1| ribosomal protein S2 [Acinetobacter baumannii IS-235]
gi|408517476|gb|EKK19016.1| ribosomal protein S2 [Acinetobacter baumannii IS-251]
gi|408695511|gb|EKL41066.1| ribosomal protein S2 [Acinetobacter baumannii OIFC098]
gi|408700629|gb|EKL46077.1| ribosomal protein S2 [Acinetobacter baumannii OIFC074]
gi|408705393|gb|EKL50735.1| ribosomal protein S2 [Acinetobacter baumannii Naval-83]
gi|408707504|gb|EKL52788.1| ribosomal protein S2 [Acinetobacter baumannii OIFC180]
gi|408710262|gb|EKL55492.1| ribosomal protein S2 [Acinetobacter baumannii Naval-13]
gi|408712410|gb|EKL57593.1| ribosomal protein S2 [Acinetobacter baumannii OIFC110]
gi|409987458|gb|EKO43639.1| 30S ribosomal protein S2 [Acinetobacter baumannii AC30]
gi|410380245|gb|EKP32833.1| ribosomal protein S2 [Acinetobacter baumannii OIFC087]
gi|410381723|gb|EKP34288.1| ribosomal protein S2 [Acinetobacter baumannii OIFC099]
gi|410384080|gb|EKP36599.1| ribosomal protein S2 [Acinetobacter baumannii OIFC065]
gi|410392824|gb|EKP45181.1| ribosomal protein S2 [Acinetobacter baumannii OIFC111]
gi|410394489|gb|EKP46817.1| ribosomal protein S2 [Acinetobacter baumannii Naval-2]
gi|410401947|gb|EKP54082.1| ribosomal protein S2 [Acinetobacter baumannii Naval-21]
gi|410409939|gb|EKP61860.1| ribosomal protein S2 [Acinetobacter baumannii Naval-82]
gi|410411331|gb|EKP63205.1| ribosomal protein S2 [Acinetobacter baumannii Canada BC1]
gi|410411884|gb|EKP63753.1| ribosomal protein S2 [Acinetobacter baumannii WC-A-694]
gi|410417244|gb|EKP69014.1| ribosomal protein S2 [Acinetobacter baumannii OIFC035]
gi|425487676|gb|EKU54034.1| ribosomal protein S2 [Acinetobacter baumannii WC-348]
gi|425496390|gb|EKU62522.1| ribosomal protein S2 [Acinetobacter baumannii WC-487]
gi|425498024|gb|EKU64113.1| ribosomal protein S2 [Acinetobacter baumannii Naval-113]
gi|444754690|gb|ELW79303.1| ribosomal protein S2 [Acinetobacter baumannii OIFC021]
gi|444756682|gb|ELW81221.1| ribosomal protein S2 [Acinetobacter baumannii WC-A-92]
gi|444763349|gb|ELW87685.1| ribosomal protein S2 [Acinetobacter baumannii AA-014]
gi|444768671|gb|ELW92882.1| ribosomal protein S2 [Acinetobacter baumannii OIFC338]
gi|444773299|gb|ELW97395.1| ribosomal protein S2 [Acinetobacter baumannii OIFC047]
gi|444776503|gb|ELX00545.1| ribosomal protein S2 [Acinetobacter baumannii Naval-78]
gi|444783208|gb|ELX07069.1| ribosomal protein S2 [Acinetobacter baumannii Naval-57]
gi|452948172|gb|EME53653.1| 30S ribosomal protein S2 [Acinetobacter baumannii MSP4-16]
Length = 250
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 100/226 (44%), Gaps = 39/226 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++D+ A H GH+ + +M+ YI+G R I +L+ + L DALNF +A +
Sbjct: 6 VSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFANQLASK 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
VLFVG S +I + AQ + W GM TN + L +++ RL DL +
Sbjct: 66 KNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQD 125
Query: 186 ------TLTTVLE---------------------PNP-----------AIGEAAKMCIPT 207
T LE P+ AI EA + IP
Sbjct: 126 GTFAKLTKREALERTREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPV 185
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+GIVD+N NP+ + Y +PGNDD A+ Y AIL GK+ Q
Sbjct: 186 IGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQ 231
>gi|348027047|ref|YP_004766852.1| 30S ribosomal protein S2 [Megasphaera elsdenii DSM 20460]
gi|341823101|emb|CCC74025.1| 30S ribosomal protein S2 [Megasphaera elsdenii DSM 20460]
Length = 247
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 39/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M +I+ R G I DL ++ + + +A NFV +A
Sbjct: 3 VVSMKQLLEAGVHFGHQTRRWNPKMARFIFTERNGIYIIDLQKTVKKMDEAYNFVRDLAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
G VLFVG Q I+ A+ C ++ W GM TN + + + V RL L
Sbjct: 63 EGGKVLFVGTKKQAQESIKNEAERCNQYFVNERWLGGMLTNFQTIEKRVKRLKTLEKQAE 122
Query: 181 ----VILTNTLTTVLE-------------------PNP-----------AIGEAAKMCIP 206
IL T+L+ P+ A+ EA K+ IP
Sbjct: 123 DGTFEILPKKEVTLLKHEMEKLQKYLGGIKDMKKLPDALFIIDPKKEEIAVSEARKLHIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+ VD+NC+P++I YP+P NDD A++ A+L+G + +Q
Sbjct: 183 IIATVDTNCDPDVIDYPIPANDDAIRAVKLLTGKIADAVLEGNQGEQ 229
>gi|154174229|ref|YP_001407659.1| 30S ribosomal protein S2 [Campylobacter curvus 525.92]
gi|153793063|gb|EAU00943.2| ribosomal protein S2 [Campylobacter curvus 525.92]
Length = 289
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 47/227 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G I DL ++ R N V A
Sbjct: 27 MVTMRDLLECGVHFGHQTRRWNPKMKRFIFGERKGIYIIDLQKTIRYFRYTYNIVRDAAA 86
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+LFVG Q I++ A+ C W GM TN
Sbjct: 87 EGKTILFVGTKKQAVEAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIETMEE 146
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + LPD+V + +T+ + A+ EA +
Sbjct: 147 DGSINLLTKKEALMLRRKKEKLIATLGGIRNMKNLPDMVFIVDTVKEKI----AVQEANR 202
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+ +P V +D+NC+P+++ YP+PGNDD ++Q +CQ AI +GK
Sbjct: 203 LKMPVVAPIDTNCDPDVVDYPIPGNDDAIRSVQLFCQEMAEAINEGK 249
>gi|225874497|ref|YP_002755956.1| 30S ribosomal protein S2 [Acidobacterium capsulatum ATCC 51196]
gi|254764449|sp|C1F401.1|RS2_ACIC5 RecName: Full=30S ribosomal protein S2
gi|225791895|gb|ACO31985.1| ribosomal protein S2 [Acidobacterium capsulatum ATCC 51196]
Length = 301
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 39/221 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K++ +A VH GH+ D RMK YI+G R G I DL ++ ++ +DA +V + +
Sbjct: 4 ITMKELLEAGVHFGHQTKRWDPRMKEYIFGERNGIYIIDLQKTLKMFKDASKYVTDMCAQ 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
++LFVG Q I + A C + W G+ TN + ++V RL +L
Sbjct: 64 GKVILFVGTKRQAQDAIAEEANRCGMYYINNRWLGGLLTNWVTVQKSVKRLQELDEMATD 123
Query: 181 ----------VI---------------------LTNTLTTVLEPNPAIG--EAAKMCIPT 207
VI L + + V N AI EA K+ IP
Sbjct: 124 GRYDLLTKKEVIRLERERKHLQANLAGIKNMRRLPDAIFVVDSNNEAIAVKEARKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
V +VD+NC+P ++ Y +PGNDD AI+ + ++++G
Sbjct: 184 VAVVDTNCDPTVVDYVIPGNDDALRAIRLFTSKIADSVIEG 224
>gi|358010681|ref|ZP_09142491.1| 30S ribosomal protein S2 [Acinetobacter sp. P8-3-8]
gi|403050826|ref|ZP_10905310.1| 30S ribosomal protein S2 [Acinetobacter bereziniae LMG 1003]
Length = 250
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++D+ A H GH+ + +M+ YI+G R I +L+ + L DALNFV ++A +
Sbjct: 6 VSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNRIHIINLEHTVPALNDALNFVNNLASK 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
VLFVG S +I + AQ + W GM TN + L +++ RL DL +
Sbjct: 66 KNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQD 125
Query: 186 ------TLTTVLE---------------------PNP-----------AIGEAAKMCIPT 207
T LE P+ AI EA + IP
Sbjct: 126 GTFAKLTKREALERTREMEKLERSLGGVKNMGGLPDALFIIDVDHEAIAIKEAKNLGIPV 185
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+GIVD+N NP+ + + +PGNDD A+ Y AIL GK+ Q
Sbjct: 186 IGIVDTNSNPDNVDFVIPGNDDAIRAVTLYASAMADAILAGKEYAQ 231
>gi|422341351|ref|ZP_16422292.1| 30S ribosomal protein S2 [Treponema denticola F0402]
gi|449104458|ref|ZP_21741198.1| 30S ribosomal protein S2 [Treponema denticola AL-2]
gi|449119338|ref|ZP_21755734.1| 30S ribosomal protein S2 [Treponema denticola H1-T]
gi|449121728|ref|ZP_21758074.1| 30S ribosomal protein S2 [Treponema denticola MYR-T]
gi|325474922|gb|EGC78108.1| 30S ribosomal protein S2 [Treponema denticola F0402]
gi|448949169|gb|EMB29994.1| 30S ribosomal protein S2 [Treponema denticola MYR-T]
gi|448950328|gb|EMB31150.1| 30S ribosomal protein S2 [Treponema denticola H1-T]
gi|448963477|gb|EMB44155.1| 30S ribosomal protein S2 [Treponema denticola AL-2]
Length = 291
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K++ ++ VH GH++ D RMK YI+ R G I DL ++ +R+A V
Sbjct: 3 VVTMKNLLESGVHFGHQVKRWDPRMKKYIFSERNGIHIIDLQKTIVAIREAYEAVRKTTS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT- 184
VLFVG Q I+K A+ C F W GM TN + +++ RL + +
Sbjct: 63 EGKSVLFVGTKKQAQQTIQKEAERCGMFYVNNRWLGGMLTNFSTIKKSLARLKKIEKMEV 122
Query: 185 ----NTLT-----------TVLEPN-----------------------PAIGEAAKMCIP 206
+ LT + LE N AI EA + IP
Sbjct: 123 DGTFDNLTKKEIASLQKEKSKLEKNLGGIKEMKDLPGILFIIDTRKEEIAIREARSLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQE 264
+ +VD+NCNP I YP+PGNDD AI + V A+++ + LK++ QE
Sbjct: 183 IIAVVDTNCNPEGIDYPIPGNDDAIRAISLFTGVIANAVIEAD--NEHGLKIIENLQE 238
>gi|449105492|ref|ZP_21742194.1| 30S ribosomal protein S2 [Treponema denticola ASLM]
gi|449108656|ref|ZP_21745297.1| 30S ribosomal protein S2 [Treponema denticola ATCC 33520]
gi|449116602|ref|ZP_21753050.1| 30S ribosomal protein S2 [Treponema denticola H-22]
gi|449124390|ref|ZP_21760709.1| 30S ribosomal protein S2 [Treponema denticola OTK]
gi|449129402|ref|ZP_21765633.1| 30S ribosomal protein S2 [Treponema denticola SP37]
gi|451969795|ref|ZP_21923024.1| 30S ribosomal protein S2 [Treponema denticola US-Trep]
gi|448942721|gb|EMB23615.1| 30S ribosomal protein S2 [Treponema denticola OTK]
gi|448946244|gb|EMB27109.1| 30S ribosomal protein S2 [Treponema denticola SP37]
gi|448953495|gb|EMB34286.1| 30S ribosomal protein S2 [Treponema denticola H-22]
gi|448960931|gb|EMB41639.1| 30S ribosomal protein S2 [Treponema denticola ATCC 33520]
gi|448966875|gb|EMB47519.1| 30S ribosomal protein S2 [Treponema denticola ASLM]
gi|451701250|gb|EMD55722.1| 30S ribosomal protein S2 [Treponema denticola US-Trep]
Length = 291
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K++ ++ VH GH++ D RMK YI+ R G I DL ++ +R+A V
Sbjct: 3 VVTMKNLLESGVHFGHQVKRWDPRMKKYIFSERNGIHIIDLQKTIVAIREAYEAVRKTTS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT- 184
VLFVG Q I+K A+ C F W GM TN + +++ RL + +
Sbjct: 63 EGKSVLFVGTKKQAQQTIQKEAERCGMFYVNNRWLGGMLTNFSTIKKSLARLKKIEKMEV 122
Query: 185 ----NTLT-----------TVLEPN-----------------------PAIGEAAKMCIP 206
+ LT + LE N AI EA + IP
Sbjct: 123 DGTFDNLTKKEIASLQKEKSKLEKNLGGIKEMKDLPGILFIIDTRKEEIAIREARSLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQE 264
+ +VD+NCNP I YP+PGNDD AI + V A+++ + LK++ QE
Sbjct: 183 IIAVVDTNCNPEGIDYPIPGNDDAIRAISLFTGVIANAVIEAD--NEHGLKIIENLQE 238
>gi|345865280|ref|ZP_08817468.1| 30S ribosomal protein S2 [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345876938|ref|ZP_08828698.1| methionine aminopeptidase [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|344226046|gb|EGV52389.1| methionine aminopeptidase [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|345123609|gb|EGW53501.1| 30S ribosomal protein S2 [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 249
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 106/226 (46%), Gaps = 42/226 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+++ L DA+N++ ++
Sbjct: 4 VSMRQMLEAGVHFGHQTRYWNPKMSPYIFGHRNKIHIVNLEKTLPLYNDAMNYIGSLSAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDC-QEFAHTRFWRQGMFTN------------------- 166
G +LFVG + + AQ C F + R W GM TN
Sbjct: 64 GGKILFVGTKRAARDAVREEAQRCGMPFVNHR-WLGGMLTNFKTIKQSIKRLKELEAMFE 122
Query: 167 -------------------SEKLFRAVTRLPDLVILTNTL--TTVLEPNPAIGEAAKMCI 205
EKL R++ + D+ L + + V N A+ EA K+ I
Sbjct: 123 DGSVEQRFNKKEGLGLKREMEKLDRSIGGIKDMGGLPDAMFVIDVGNENIAVAEARKLGI 182
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
P VG+VD+N +P+ I Y +PGNDD A+Q + Q A+L+G+ +
Sbjct: 183 PVVGVVDTNNDPDDIDYVIPGNDDAIRAVQLFVQGASAAVLEGRAS 228
>gi|336323891|ref|YP_004603858.1| 30S ribosomal protein S2 [Flexistipes sinusarabici DSM 4947]
gi|336107472|gb|AEI15290.1| ribosomal protein S2 [Flexistipes sinusarabici DSM 4947]
Length = 282
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 41/240 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K++ +A VH GH+ + +M Y++G R G I DL ++ + A FV
Sbjct: 4 ISMKNLLEAGVHFGHQTKRWNPKMSKYVFGKRNGIYIVDLQKTVQCFNQAYEFVRDSTKN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
LFVG Q ++ +A+ C F W G TN ++ V R+ +L + N+
Sbjct: 64 GAKTLFVGTKKQAQEAVKTSAEKCGSFYVNNRWLGGTMTNFATIYSRVQRMKELEEMFNS 123
Query: 187 ---------------------------------------LTTVLEPNPAIGEAAKMCIPT 207
+ + A+ EA + IP
Sbjct: 124 GFINRFKKKEIASLNREYEKLYKNLAGIKEMEKLPDLIFIIDIKREMNAVNEARNLGIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEVQH 267
V IVD+NC+P+L+ +P+PGNDD A Q AI +GK+ ++D +L+ E QE Q
Sbjct: 184 VAIVDTNCDPDLVDFPIPGNDDAIRACQLISDRMANAINEGKQLRED--ELVQEVQERQQ 241
>gi|262379486|ref|ZP_06072642.1| ribosomal protein S2 [Acinetobacter radioresistens SH164]
gi|421857778|ref|ZP_16290099.1| 30S ribosomal protein S2 [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|262298943|gb|EEY86856.1| ribosomal protein S2 [Acinetobacter radioresistens SH164]
gi|403186787|dbj|GAB76300.1| 30S ribosomal protein S2 [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 248
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 104/238 (43%), Gaps = 39/238 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++D+ A H GH+ + +M+ YI+G R I +L+ + L DALNF +A +
Sbjct: 6 VSMRDLLTAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFANQLASK 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
VLFVG S +I + AQ + W GM TN + L +++ RL DL +
Sbjct: 66 KNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQD 125
Query: 186 ------TLTTVLE---------------------PNP-----------AIGEAAKMCIPT 207
T LE P+ AI EA + IP
Sbjct: 126 GTFAKLTKREALERAREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPV 185
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEV 265
+GIVD+N NP+ + Y +PGNDD A+ Y AI+ GK+ Q ++ +E
Sbjct: 186 IGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAIIAGKEYAQSQANAQAKAEEA 243
>gi|259907542|ref|YP_002647898.1| 30S ribosomal protein S2 [Erwinia pyrifoliae Ep1/96]
gi|387870299|ref|YP_005801669.1| 30S ribosomal protein S2 [Erwinia pyrifoliae DSM 12163]
gi|224963164|emb|CAX54648.1| 30S ribosomal protein S2 [Erwinia pyrifoliae Ep1/96]
gi|283477382|emb|CAY73298.1| 30S ribosomal protein S2 [Erwinia pyrifoliae DSM 12163]
Length = 243
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 103/223 (46%), Gaps = 39/223 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+L+ +D+ A H GH+ + +MKPYIY VR I +LD + + A + + I+
Sbjct: 4 DLISTRDLVQAGAHFGHQTRFWNPKMKPYIYCVRNKVHIINLDITQPMFETASDELEEIS 63
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI-- 182
R+G +LFVG S +++ A C +F W GM TN + + +++ RL DL I
Sbjct: 64 SREGKILFVGTKRAASEAVKEYALSCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLAIQS 123
Query: 183 ----------------------LTNTLTTVLE----PNP-----------AIGEAAKMCI 205
L N+L + + P+ AI EA + I
Sbjct: 124 QDGTFDKLTKKEALMRARELAKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGI 183
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
P IVD+N +P+ + Y +PGNDD AI+ Y + AI KG
Sbjct: 184 PVFAIVDTNSDPDGVDYIIPGNDDAIRAIRLYLSIVSAAIRKG 226
>gi|154253635|ref|YP_001414459.1| 30S ribosomal protein S2 [Parvibaculum lavamentivorans DS-1]
gi|171769680|sp|A7HY19.1|RS2_PARL1 RecName: Full=30S ribosomal protein S2
gi|154157585|gb|ABS64802.1| ribosomal protein S2 [Parvibaculum lavamentivorans DS-1]
Length = 253
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 101/224 (45%), Gaps = 40/224 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M+P+++G R I DL Q+ LL AL V + G
Sbjct: 8 MRQLLEAGVHFGHQTHRWNPKMEPFLFGDRNNIHIIDLAQTVPLLHQALVTVRDVVAGGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q S + A+ C ++ W GM TN
Sbjct: 68 RVLFVGTKRQASDPVAAAARQCAQYYINHRWLGGMLTNWKTISNSIRRLRQLDEMLAGEA 127
Query: 167 --------------SEKLFRAVTRLPDLVILTNTLTTVLEPNP---AIGEAAKMCIPTVG 209
+KL RA+ + D+ L + L V++ N AI EA K+ I V
Sbjct: 128 KGLTKKEVLNLTRERDKLERAIGGIKDMGGLPD-LIFVIDTNKEEIAIQEARKLGIAVVA 186
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
I+DSN NP+ I +PVPGNDD AI YC + A++ G Q
Sbjct: 187 ILDSNSNPDGIAFPVPGNDDAARAISLYCDLVSRAVIDGISQSQ 230
>gi|448243662|ref|YP_007407715.1| 30S ribosomal subunit protein S2 [Serratia marcescens WW4]
gi|445214026|gb|AGE19696.1| 30S ribosomal subunit protein S2 [Serratia marcescens WW4]
gi|453065473|gb|EMF06435.1| 30S ribosomal protein S2 [Serratia marcescens VGH107]
Length = 241
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+Q+ + AL + I+ R
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEQTVPMFNAALAELTKISSR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S ++ A C +F W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASEAVKDAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTLDKLTKKEALMRTRELAKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N NP+ + + +PGNDD A+ Y A+ +G+
Sbjct: 184 FSIVDTNSNPDGVDFIIPGNDDAIRAVNLYLTAVAAAVREGR 225
>gi|299769325|ref|YP_003731351.1| 30S ribosomal protein S2 [Acinetobacter oleivorans DR1]
gi|375135435|ref|YP_004996085.1| 30S ribosomal protein S2 [Acinetobacter calcoaceticus PHEA-2]
gi|424742706|ref|ZP_18171027.1| ribosomal protein S2 [Acinetobacter baumannii WC-141]
gi|427424720|ref|ZP_18914838.1| ribosomal protein S2 [Acinetobacter baumannii WC-136]
gi|298699413|gb|ADI89978.1| 30S ribosomal protein S2 [Acinetobacter oleivorans DR1]
gi|325122880|gb|ADY82403.1| 30S ribosomal protein S2 [Acinetobacter calcoaceticus PHEA-2]
gi|422943936|gb|EKU38946.1| ribosomal protein S2 [Acinetobacter baumannii WC-141]
gi|425698500|gb|EKU68138.1| ribosomal protein S2 [Acinetobacter baumannii WC-136]
Length = 250
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 100/226 (44%), Gaps = 39/226 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++D+ A H GH+ + +M+ YI+G R I +L+ + L DALNF +A +
Sbjct: 6 VSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHIINLEHTVPALNDALNFANQLASK 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
VLFVG S +I + AQ + W GM TN + L +++ RL DL +
Sbjct: 66 KNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQD 125
Query: 186 ------TLTTVLE---------------------PNP-----------AIGEAAKMCIPT 207
T LE P+ AI EA + IP
Sbjct: 126 GTFAKLTKREALERAREMEKLERSLGGVKNMGGLPDALFVIDVDHEAIAIKEAKNLGIPV 185
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+GIVD+N NP+ + Y +PGNDD A+ Y AIL GK+ Q
Sbjct: 186 IGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAILAGKEYAQ 231
>gi|410088375|ref|ZP_11285070.1| SSU ribosomal protein S2p (SAe) [Morganella morganii SC01]
gi|455738087|ref|YP_007504353.1| SSU ribosomal protein S2p (SAe) [Morganella morganii subsp.
morganii KT]
gi|409765297|gb|EKN49412.1| SSU ribosomal protein S2p (SAe) [Morganella morganii SC01]
gi|455419650|gb|AGG29980.1| SSU ribosomal protein S2p (SAe) [Morganella morganii subsp.
morganii KT]
Length = 239
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + DAL + IA R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELNKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVQEAAISCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD AI+ Y T++ +G+
Sbjct: 184 FAIVDTNSDPDGVDFIIPGNDDAIRAIKLYLGAVATSVREGR 225
>gi|325983646|ref|YP_004296048.1| 30S ribosomal protein S2 [Nitrosomonas sp. AL212]
gi|325533165|gb|ADZ27886.1| ribosomal protein S2 [Nitrosomonas sp. AL212]
Length = 239
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 117/237 (49%), Gaps = 40/237 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+++ + +A+ ++ ++
Sbjct: 3 VTMRQMLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKTLVMYEEAMKYIRQLSAN 62
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL--VILT 184
G++LFVG Q ++ + A C + W GM TN + + +++ RL D+ ++
Sbjct: 63 KGVILFVGTKRQARDIVREEAMRCGSPYVDQRWLGGMLTNFKTIKQSIKRLQDMENMVQD 122
Query: 185 NTLTTVLEPNP-------------------------------------AIGEAAKMCIPT 207
TL +++ AI EA K+ IP
Sbjct: 123 GTLDKLVKKEALDLQRELDKLNSSLGGIKDMKGLPDALFVIDVGYQKGAITEARKLGIPV 182
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK-KAKQDTLKLLSEKQ 263
+G+VD+N NP+ + Y +PGNDD+ AI+ Y + AIL+G+ +A Q+ +++ +E +
Sbjct: 183 IGVVDTNHNPDNLHYIIPGNDDSSRAIRLYARGAADAILEGRNQAIQEIVEMTAEAE 239
>gi|338730817|ref|YP_004660209.1| 30S ribosomal protein S2P [Thermotoga thermarum DSM 5069]
gi|335365168|gb|AEH51113.1| SSU ribosomal protein S2P [Thermotoga thermarum DSM 5069]
Length = 264
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 51/249 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A H GH+ + +M PYIYG R+G I DL ++ +LL +A +FV A
Sbjct: 3 VVTMKQLLEAGAHFGHRTRRWNPKMAPYIYGERKGIYIIDLQKTLKLLEEACDFVRAKAS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS------------------ 167
+LFVG Q +I + A+ C F W G+ TN
Sbjct: 63 EGATMLFVGTKKQAQHVIREEAKRCGAFYVDNRWLGGLLTNFNTIKNRIARLIELEQMEE 122
Query: 168 -------------------EKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL + +T+LPD+V + + E N A+ EA +
Sbjct: 123 NGELSKLPKKEQSKVRRELEKLRKNLGGLKGMTKLPDIVYIVDPRK---EKN-AVAEANR 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK----AKQDTLKL 258
+ IP V IVD+NC+P+ I + +P NDD +I+ A L+G++ A+Q ++
Sbjct: 179 LGIPIVAIVDTNCDPDPIDFVIPANDDAIRSIKLITSKIADAYLEGREGVSFAEQPEVQA 238
Query: 259 LSEKQEVQH 267
SE+ +V
Sbjct: 239 QSEEMQVSE 247
>gi|119774276|ref|YP_927016.1| 30S ribosomal protein S2 [Shewanella amazonensis SB2B]
gi|119766776|gb|ABL99346.1| SSU ribosomal protein S2P [Shewanella amazonensis SB2B]
Length = 258
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 46/246 (18%)
Query: 54 PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELL 113
PL F++ V ++DM A VH GH+ + +MKP+I+G R G I +L+ + +
Sbjct: 8 PLLLFKVFKM-TTVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMF 66
Query: 114 RDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRA 173
+AL F++++A + G +LFVG S I++ A C ++ W GM TN + + ++
Sbjct: 67 NEALAFISNVASKKGKILFVGTKRAASEAIKEAAVSCDQYYVDHRWLGGMLTNWKTVRQS 126
Query: 174 VTRLPDL-----------------VILTNTLTTVLE-----------PNP---------- 195
+ RL +L ++ T L + + P+
Sbjct: 127 IKRLKELETQSVDGTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDALFVIGADHEH 186
Query: 196 -AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK----- 249
AI EA + IP V +VD+N +P+ + Y VPGNDD AI+ Y + TA G+
Sbjct: 187 IAIKEANNLGIPVVAVVDTNASPDGVNYIVPGNDDAMRAIRLYTEAAATAAKAGRGQDLA 246
Query: 250 -KAKQD 254
+A+QD
Sbjct: 247 VQAEQD 252
>gi|383643048|ref|ZP_09955454.1| 30S ribosomal protein S2 [Sphingomonas elodea ATCC 31461]
Length = 251
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 103/224 (45%), Gaps = 40/224 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++ + ++ H GH+ + +MKPYI+G R G I DL Q+ L AL FV+
Sbjct: 5 VVTMQQLLESGAHFGHQTHRWNPKMKPYIFGERNGVHIIDLSQTVPLFARALEFVSSTVA 64
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDC-QEFAHTRFWRQGMFTNSEKLFRAVTRL----PDL 180
G VLFVG Q I + A+ Q F + R W GM TN + + ++ RL L
Sbjct: 65 AGGKVLFVGTKRQAQEPIAEAARRAGQHFVNHR-WLGGMLTNWKTISNSIKRLKTLEEQL 123
Query: 181 VILTNTLTT-------------------------------VLEPNP---AIGEAAKMCIP 206
T+ LT V++ N AI EA + IP
Sbjct: 124 SGDTHGLTKKEVLQLTRERDKLELSLGGIRDMGGIPDIMFVIDANKEELAIKEANTLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
V ++DSN +P+ I +PVPGNDD AI+ YC+ A +G +
Sbjct: 184 VVAVLDSNVSPDGIAFPVPGNDDASRAIRLYCEAIAIAATRGGR 227
>gi|449127695|ref|ZP_21763966.1| 30S ribosomal protein S2 [Treponema denticola SP33]
gi|448943529|gb|EMB24417.1| 30S ribosomal protein S2 [Treponema denticola SP33]
Length = 291
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K++ ++ VH GH++ D RMK YI+ R G I DL ++ +R+A V
Sbjct: 3 VVTMKNLLESGVHFGHQVKRWDPRMKKYIFSERNGIHIIDLQKTIVAIREAYEAVRKTTS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT- 184
VLFVG Q I+K A+ C F W GM TN + +++ RL + +
Sbjct: 63 EGKSVLFVGTKKQAQQTIQKEAERCGMFYINNRWLGGMLTNFSTIKKSLARLKKIEKMEV 122
Query: 185 ----NTLT-----------TVLEPN-----------------------PAIGEAAKMCIP 206
+ LT + LE N AI EA + IP
Sbjct: 123 DGTFDNLTKKEIASLQKEKSKLEKNLGGIKEMKDLPGILFIIDTRKEEIAIREARSLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQE 264
+ +VD+NCNP I YP+PGNDD AI + V A+++ + LK++ QE
Sbjct: 183 IIAVVDTNCNPEGIDYPIPGNDDAIRAISLFTGVIANAVIEAD--NEHGLKIIENLQE 238
>gi|374313959|ref|YP_005060388.1| 30S ribosomal protein S2 [Serratia symbiotica str. 'Cinara cedri']
gi|363988185|gb|AEW44376.1| 30S ribosomal protein S2 [Serratia symbiotica str. 'Cinara cedri']
Length = 241
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+Q+ + AL+ + A R
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEQTVPMFNAALSQLTKFAAR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A +C ++ W GM TN + + +++ RL DL +
Sbjct: 64 KGKILFVGTKRAASEAVKEAAHNCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLELQSQD 123
Query: 183 --------------------LTNTLTT------------VLEPNP---AIGEAAKMCIPT 207
L N+L V++ N AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELAKLENSLGGIKGMGGLPDALFVIDANHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N P+ I + +PGNDD A+ Y TAI +G+
Sbjct: 184 FSIVDTNSAPDGIDFIIPGNDDAIRAVSLYLTAVATAICEGR 225
>gi|338707134|ref|YP_004661335.1| 30S ribosomal protein S2 [Zymomonas mobilis subsp. pomaceae ATCC
29192]
gi|336293938|gb|AEI37045.1| ribosomal protein S2 [Zymomonas mobilis subsp. pomaceae ATCC 29192]
Length = 250
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 100/227 (44%), Gaps = 39/227 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ + D H GH+ + +MKPYI+G R G I DL Q+ L AL+F+
Sbjct: 6 VTMQSLLDVGAHFGHQTHRWNPKMKPYIFGDRNGIHIMDLSQTVPLFTRALDFIGQTVAH 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG Q I A+ +F W GM TN + ++ RL L
Sbjct: 66 GGKVLFVGTKRQAQEPIADAARRSGQFFVNHRWLGGMLTNWRTISGSIKRLKTLEEKLSG 125
Query: 181 --------VILTNT---------------------LTTVLEPNP---AIGEAAKMCIPTV 208
IL T + V++ N AI EA + IP V
Sbjct: 126 DAAGFTKKEILQLTRERDKLELSLGGIRDMGTIPDIMFVVDANKEELAIKEANTLGIPVV 185
Query: 209 GIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG-KKAKQD 254
I+DSN +P+ I +P+P NDD A++YYC A +G ++ +QD
Sbjct: 186 AILDSNVSPDGIAFPIPANDDAARAVRYYCDAIADAATRGDQQNRQD 232
>gi|78042772|ref|YP_360607.1| 30S ribosomal protein S2 [Carboxydothermus hydrogenoformans Z-2901]
gi|123770565|sp|Q3AB77.1|RS2_CARHZ RecName: Full=30S ribosomal protein S2
gi|77994887|gb|ABB13786.1| ribosomal protein S2 [Carboxydothermus hydrogenoformans Z-2901]
Length = 232
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 41/228 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M YI+ R G I DL ++A+ L +A +FV ++
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMAEYIFTDRNGIYIIDLQKTAKKLEEAYSFVRELSA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+ G +LFVG Q I++ A+ C F + W G TN
Sbjct: 63 QGGTILFVGTKKQAQDAIKEEAERCGMFYVNQRWLGGTLTNFKTIRKRVERLIEIEKMEQ 122
Query: 167 ------------------SEKLFRAVTRLPDLVILTNTLTTVLEPNP---AIGEAAKMCI 205
EKL R ++ + ++ L + L V++P A+ EA K+ I
Sbjct: 123 EGALSVLPKKEVAKILKEKEKLSRFLSGIKEMKKLPDAL-FVVDPRKEKIAVAEARKLDI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P V IVD+NC+P+ + Y +PGNDD A++ A+++G++ +Q
Sbjct: 182 PVVAIVDTNCDPDEVDYVIPGNDDAIRAVKLITSKIADAVIEGRQGEQ 229
>gi|387823796|ref|YP_005823267.1| 30S ribosomal protein S2 [Francisella cf. novicida 3523]
gi|328675395|gb|AEB28070.1| SSU ribosomal protein S2p (SAe) [Francisella cf. novicida 3523]
Length = 239
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 39/217 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K+M A VH GHK + +MK YI+G+ G I +L+++ L +DA+NFV G
Sbjct: 4 MKEMLSAGVHFGHKKAFWNPQMKEYIFGINHGVHIINLEKTVPLFQDAVNFVGKTVANGG 63
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-------- 180
+LFVG Q ++E A+ C + W GM TN + + +++ RL L
Sbjct: 64 KILFVGTKRQAQDIVEAEAKRCGMPYVSHRWLGGMLTNYKTVRQSIKRLAQLEKMREDGT 123
Query: 181 -------VILTNTLT---------------------TVLEPNP---AIGEAAKMCIPTVG 209
+L N T V++ N AI EA K+ I V
Sbjct: 124 LESLTKKEMLQNIRTIEKLEKVLGGIKEMGGLPDAIVVIDSNKEHIAIQEAQKLGIKVVS 183
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAIL 246
IVD+N P I Y +PGNDD +I +Y + F A++
Sbjct: 184 IVDTNSTPEGIDYIIPGNDDAVKSISFYMKKFADAVI 220
>gi|94967594|ref|YP_589642.1| 30S ribosomal protein S2 [Candidatus Koribacter versatilis
Ellin345]
gi|122986448|sp|Q1IU82.1|RS2_ACIBL RecName: Full=30S ribosomal protein S2
gi|94549644|gb|ABF39568.1| SSU ribosomal protein S2P [Candidatus Koribacter versatilis
Ellin345]
Length = 301
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 106/221 (47%), Gaps = 39/221 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K++ +A VH GH+ + +MK YI+G R G I DL ++ ++ ++A FV+ +A
Sbjct: 4 ITMKELLEAGVHFGHQTKRWNPKMKEYIFGERNGIYIIDLQKTLKMFKEASKFVSDVAAE 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
+VLFVG Q I + A+ C F + W G+ TN + ++V RL +L
Sbjct: 64 GKLVLFVGTKRQAQDAIAEEAKRCGMFYINQRWLGGLLTNWVTVQKSVKRLKELDEMATD 123
Query: 181 ----------VI--------LTNTLTT------------VLEPNP---AIGEAAKMCIPT 207
VI L L V++ N A+ EA K+ IP
Sbjct: 124 GRYELLPKKEVIKLERERKHLQANLAGIKNLNRLPDCLFVIDSNKEQIAVKEARKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
V +VD+NC+P+ + Y +PGNDD AI+ + ++ +G
Sbjct: 184 VAVVDTNCDPSEVDYVIPGNDDALRAIRLFASKIADSVAEG 224
>gi|42527848|ref|NP_972946.1| 30S ribosomal protein S2 [Treponema denticola ATCC 35405]
gi|449111161|ref|ZP_21747760.1| 30S ribosomal protein S2 [Treponema denticola ATCC 33521]
gi|449114020|ref|ZP_21750502.1| 30S ribosomal protein S2 [Treponema denticola ATCC 35404]
gi|61215634|sp|Q73K75.1|RS2_TREDE RecName: Full=30S ribosomal protein S2
gi|41818676|gb|AAS12865.1| ribosomal protein S2 [Treponema denticola ATCC 35405]
gi|448957459|gb|EMB38201.1| 30S ribosomal protein S2 [Treponema denticola ATCC 35404]
gi|448959424|gb|EMB40145.1| 30S ribosomal protein S2 [Treponema denticola ATCC 33521]
Length = 291
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K++ ++ VH GH++ D RMK YI+ R G I DL ++ +R+A V
Sbjct: 3 VVTMKNLLESGVHFGHQVKRWDPRMKKYIFSERNGIHIIDLQKTIVAIREAYEAVRKTTS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT- 184
VLFVG Q I+K A+ C F W GM TN + +++ RL + +
Sbjct: 63 EGKSVLFVGTKKQAQQTIQKEAERCGMFYINNRWLGGMLTNFSTIKKSLARLKKIEKMEV 122
Query: 185 ----NTLT-----------TVLEPN-----------------------PAIGEAAKMCIP 206
+ LT + LE N AI EA + IP
Sbjct: 123 DGTFDNLTKKEIASLQKEKSKLEKNLGGIKEMKDLPGILFIIDTRKEEIAIREARSLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQE 264
+ +VD+NCNP I YP+PGNDD AI + V A+++ + LK++ QE
Sbjct: 183 IIAVVDTNCNPEGIDYPIPGNDDAIRAISLFTGVIANAVIEAD--NEHGLKIIENLQE 238
>gi|209573711|sp|A7GWR7.2|RS2_CAMC5 RecName: Full=30S ribosomal protein S2
Length = 263
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 47/227 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G I DL ++ R N V A
Sbjct: 1 MVTMRDLLECGVHFGHQTRRWNPKMKRFIFGERKGIYIIDLQKTIRYFRYTYNIVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+LFVG Q I++ A+ C W GM TN
Sbjct: 61 EGKTILFVGTKKQAVEAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIETMEE 120
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + LPD+V + +T+ + A+ EA +
Sbjct: 121 DGSINLLTKKEALMLRRKKEKLIATLGGIRNMKNLPDMVFIVDTVKEKI----AVQEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+ +P V +D+NC+P+++ YP+PGNDD ++Q +CQ AI +GK
Sbjct: 177 LKMPVVAPIDTNCDPDVVDYPIPGNDDAIRSVQLFCQEMAEAINEGK 223
>gi|225849793|ref|YP_002730027.1| 30S ribosomal protein S2 [Persephonella marina EX-H1]
gi|225644933|gb|ACO03119.1| ribosomal protein S2 [Persephonella marina EX-H1]
Length = 300
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 47/230 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++++ +A VH GH+ + +M PYI+ R G I DL ++ L + A FV +
Sbjct: 5 ITMRELLEAGVHFGHQTRRWNPKMAPYIFTKRNGIHIIDLAKTIPLFKVAWEFVRDEVAK 64
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL--------- 177
+LFVG Q +IE+ A C + W G+ TN + ++V +L
Sbjct: 65 GSDILFVGTKKQAQQIIEEQATRCGAYYINERWLGGLLTNFTTVRKSVAKLKKLETMEAE 124
Query: 178 ----------------------------------PDLVILTNTLTTVLEPNPAIGEAAKM 203
PD++ + +T+ L A+ EA K+
Sbjct: 125 GAFEILPKKEVVKLKKKKEKLEKYLKGIKDMEKIPDIIFIVDTVREEL----AVKEAKKL 180
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
IP V I D+NC+P++I YP+PGNDD AI A+++GK ++
Sbjct: 181 GIPVVAIADTNCDPDMIDYPIPGNDDAIKAINLITTKIADAVIEGKSLRE 230
>gi|347758101|ref|YP_004865663.1| 30S ribosomal protein S2 [Micavibrio aeruginosavorus ARL-13]
gi|347590619|gb|AEP09661.1| ribosomal protein S2 [Micavibrio aeruginosavorus ARL-13]
Length = 261
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 39/223 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + +M+P+I+GVR G I DL Q+ +L L + I + G
Sbjct: 8 MRQLLEAGVHFGHHTRRWNPKMRPFIFGVRNGIHIMDLQQTVPMLDAGLKGIRDIVSKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-VILTNTL 187
VLFVG Q + + A+ C ++ W GM TN + + ++ RL +L I+++ +
Sbjct: 68 RVLFVGTKRQAQDKVAEAAKKCGQYYVNHRWLGGMMTNWKTVSGSINRLRELDSIMSSDM 127
Query: 188 TT-----------------------------------VLEPNP---AIGEAAKMCIPTVG 209
+ V++ N AI EA + IP
Sbjct: 128 ASKYTKKELLMMAREREKLEKSIGGIKEMGGVPDALFVIDTNMEDIAIKEANMLGIPVFA 187
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
I+DSN +P + +P+PGNDD AI+ YC + ++L G +A+
Sbjct: 188 ILDSNSDPAGVDFPIPGNDDALRAIELYCDLVAASVLDGLQAE 230
>gi|209573691|sp|A1S4P0.2|RS2_SHEAM RecName: Full=30S ribosomal protein S2
Length = 242
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 45/233 (19%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R G I +L+ + + +AL F++++A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G +LFVG S I++ A C ++ W GM TN + + +++ RL +L
Sbjct: 64 KGKILFVGTKRAASEAIKEAAVSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELETQSVD 123
Query: 181 -----------VILTNTLTTVLE-----------PNP-----------AIGEAAKMCIPT 207
++ T L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDALFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK------KAKQD 254
V +VD+N +P+ + Y VPGNDD AI+ Y + TA G+ +A+QD
Sbjct: 184 VAVVDTNASPDGVNYIVPGNDDAMRAIRLYTEAAATAAKAGRGQDLAVQAEQD 236
>gi|403416151|emb|CCM02851.1| predicted protein [Fibroporia radiculosa]
Length = 304
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V + + + H GH ++ PY YGVR G + DLD + LLR A N V +A +
Sbjct: 91 VTLSALMASGAHFGHSQSLMNPNFMPYAYGVRAGITVIDLDHTLPLLRRAANVVRGVAAK 150
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAH--TRFWRQGMFTNSEKLFRAVTR-----LPD 179
G ++FVG ++ K A+ E + W G TN +F A +PD
Sbjct: 151 GGTIVFVGTRPDLRPIVRKAAERVGERVYHVGEKWLPGTLTNKIVMFGAEAAKSEQVVPD 210
Query: 180 LVILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQ 239
LVIL N + V AI E A +PT+GI+DSN +P ++ YP+P ND+ +
Sbjct: 211 LVILLNPIPNVH----AIRECAIEHVPTIGIIDSNVDPRIVMYPIPANDENTRTAELIAG 266
Query: 240 VFKTAILKG 248
V A +G
Sbjct: 267 VLSIAGREG 275
>gi|261407950|ref|YP_003244191.1| 30S ribosomal protein S2 [Paenibacillus sp. Y412MC10]
gi|329929325|ref|ZP_08283078.1| ribosomal protein S2 [Paenibacillus sp. HGF5]
gi|261284413|gb|ACX66384.1| ribosomal protein S2 [Paenibacillus sp. Y412MC10]
gi|328936694|gb|EGG33137.1| ribosomal protein S2 [Paenibacillus sp. HGF5]
Length = 232
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 39/229 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M +I+ R G I DL ++ + + +A NFV +A
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMDKFIFTERNGIYIIDLQKTVKKVEEAFNFVKSVAG 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
+G +LFVG Q +++ A+ C F + W G TN E + + + RL L
Sbjct: 63 ENGTILFVGTKKQAQDSVKEEAERCGMFYINQRWLGGTLTNFETIQKRINRLKQLETWEE 122
Query: 181 -----------VILTN--------------------TLTTVLEPNP---AIGEAAKMCIP 206
VIL + V++P A+ EA K+ IP
Sbjct: 123 DGTFQVLPKKEVILLRKEKDRLEKFLGGIKNMKGLPSALFVIDPRKERIAVAEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
VGIVD+NC+P+ I Y +PGNDD A++ A+++ + ++ T
Sbjct: 183 IVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVVEAHQGEETT 231
>gi|374814020|ref|ZP_09717757.1| 30S ribosomal protein S2 [Treponema primitia ZAS-1]
Length = 290
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 97/222 (43%), Gaps = 47/222 (21%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K++ ++ VH GH++ D RMK YI+ R G I DL ++ + ++DA + V
Sbjct: 1 MKNLLESGVHFGHQVKRWDPRMKKYIFAERNGIHIIDLQKTIQAIKDAYDAVRKTVSSGK 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS--------------------- 167
VLFVG Q I+K A+ C F W GM TN
Sbjct: 61 TVLFVGTKKQAQQAIQKEAERCGMFFVNNRWLGGMLTNFTTIKKSLLRLKKLEKMEVDGT 120
Query: 168 -------------------EKLFRAVTRL---PDLVILTNTLTTVLEPNPAIGEAAKMCI 205
EK + + P ++ + +T + A+ EA +M I
Sbjct: 121 FENLTKKEIASLGKERSKLEKNLGGIKEMKDPPGILFIIDTRKEAI----AVAEAQRMGI 176
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILK 247
P V +VD+NCNP I YP+PGNDD AI + Q+ A+++
Sbjct: 177 PIVAVVDTNCNPEGIDYPIPGNDDAIRAITLFTQIVANAVVE 218
>gi|149914865|ref|ZP_01903394.1| ribosomal protein S2 [Roseobacter sp. AzwK-3b]
gi|149811053|gb|EDM70890.1| ribosomal protein S2 [Roseobacter sp. AzwK-3b]
Length = 267
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 46/222 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM +IYG R G I DL Q+ +L ALN + + + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMGEFIYGARNGIHIIDLTQTVPMLDAALNAIRDVVSKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR------------ 176
+LFVG Q + + A C ++ W G TN + + +++ R
Sbjct: 68 RILFVGTKRQAAQPVADAADRCAQYYMNHRWLGGTLTNWQTVSQSIKRLNEIDEILGAGA 127
Query: 177 ------------------------------LPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
LPD++ + + L A+ EA K+ IP
Sbjct: 128 GGLTKKERLGIERDQQKLQASLGGIREMGGLPDMLFVIDVKKEAL----AVAEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
V IVD+NC+P+ + Y +PGNDD AI YC + L G
Sbjct: 184 VVAIVDTNCSPDGVDYIIPGNDDAARAISLYCDLVSRTALDG 225
>gi|422007776|ref|ZP_16354762.1| 30S ribosomal protein S2 [Providencia rettgeri Dmel1]
gi|414097666|gb|EKT59321.1| 30S ribosomal protein S2 [Providencia rettgeri Dmel1]
Length = 241
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL + IA R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A C ++ W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ I + +PGNDD AI+ Y + + +G+
Sbjct: 184 FAIVDTNSDPDGIDFVIPGNDDAIRAIKLYLGAVASTVREGR 225
>gi|242278737|ref|YP_002990866.1| 30S ribosomal protein S2 [Desulfovibrio salexigens DSM 2638]
gi|259494994|sp|C6C1T1.1|RS2_DESAD RecName: Full=30S ribosomal protein S2
gi|242121631|gb|ACS79327.1| ribosomal protein S2 [Desulfovibrio salexigens DSM 2638]
Length = 259
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 39/235 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K M + VH GH+ + +M+PYI+G R G I DL Q+ +L R A +F+A +
Sbjct: 4 VTMKQMLETGVHFGHQTRRWNPKMRPYIFGARNGIHIMDLQQTVKLFRKAHDFIADNVAK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLF+G Q I A F T W G TN + + +++ RL L
Sbjct: 64 GGKVLFIGTKRQAQEAIAAEASRAGMFHVTHRWMGGTLTNFQTIKKSIDRLKKLEEMFED 123
Query: 181 ----------VILTN--------------------TLTTVLEPNP---AIGEAAKMCIPT 207
+++ + V++P AI E K+ IP
Sbjct: 124 GSIKRFPKKEIVMMGREVKKLNLALGGIKDLNGAPAVAFVIDPKREQIAIQECRKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
V +VDSNC+P+++ Y +PGNDD AI+ + A L+G +++ + +E+
Sbjct: 184 VAVVDSNCDPDMVDYIIPGNDDAIRAIKLFASHMADACLEGAARRKEDKAMEAEE 238
>gi|88857977|ref|ZP_01132619.1| 30S ribosomal subunit protein S2 [Pseudoalteromonas tunicata D2]
gi|88819594|gb|EAR29407.1| 30S ribosomal subunit protein S2 [Pseudoalteromonas tunicata D2]
Length = 242
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 107/224 (47%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+ + + +AL+F+ ++A
Sbjct: 4 VSMRDMLQAGVHFGHQARYWNPKMKPFIFGARNRVHIINLEHTVPMFNEALSFLRNVASN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ AQ ++ W GM TN + + +++ RL +L I
Sbjct: 64 KGKILFVGTKRAASEAVKEAAQRSDQYYVNHRWLGGMLTNWKTVRQSIKRLKELEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L +L + + P+ AI EA + IP
Sbjct: 124 GTFEKLTKKEALMLSREMDKLEKSLGGIKDMGGLPDALFVIDADHEHIAIREANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V IVD+N NP+ + + VPGNDD A+Q Y I++G+++
Sbjct: 184 VSIVDTNSNPDGVDFIVPGNDDAIRAVQLYTGAVAQNIIEGRES 227
>gi|356960708|ref|ZP_09063690.1| 30S ribosomal protein S2, partial [gamma proteobacterium SCGC
AAA001-B15]
Length = 284
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 102/232 (43%), Gaps = 39/232 (16%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K M +A VH GH+ +M+P+IYG R G I +L+++ D LNF + A G
Sbjct: 6 MKKMLEAGVHFGHRARFWHPKMEPFIYGTRNGVHIINLEKTLPQFNDVLNFASKTAAHGG 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN--- 185
+LFVG S +I++ A C W GM TN + + ++ RL DL L
Sbjct: 66 SILFVGTKRAASNIIKEEAIRCGMPYVNHRWLGGMMTNYKTIKASIKRLKDLEFLAEENF 125
Query: 186 ---------TLTTVLEP--------------------------NPAIGEAAKMCIPTVGI 210
+T +E A+ EA + +P +G+
Sbjct: 126 SQYSKKEALAMTREMEKLERSLGGIKDLGGIPDVVFVIDIGHERNAVREARTLQLPIIGV 185
Query: 211 VDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
VDSN NP I Y + GNDD+ AI YY + A+L+ KA T K EK
Sbjct: 186 VDSNHNPEGIDYVIAGNDDSIRAISYYTREIANAVLEA-KASISTKKASKEK 236
>gi|377578717|ref|ZP_09807693.1| 30S ribosomal protein S2 [Escherichia hermannii NBRC 105704]
gi|377540030|dbj|GAB52858.1| 30S ribosomal protein S2 [Escherichia hermannii NBRC 105704]
Length = 241
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+Q+ + DAL + IA R
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEQTVPMFNDALAELNKIAAR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A+ C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVKEAAESCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A+ Y T + + +
Sbjct: 184 FAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLNAVATTVREAR 225
>gi|406956819|gb|EKD84858.1| 30S ribosomal protein S2 [uncultured bacterium]
Length = 282
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 39/219 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++++ +A VH GH++ RMKPYIYG + G + DL QS + L++A FV ++
Sbjct: 7 LQELLEAGVHFGHQVRRGHPRMKPYIYGAKDGVSVIDLTQSEKYLKEACEFVYNLGKEGK 66
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPD--------- 179
++LFVG Q +IE+ A+ + T W G TN E++ + + +L +
Sbjct: 67 VLLFVGTKKQAQPIIEEEAKKLEAPFLTHRWMGGFLTNFEEIKKNIKKLKEYLDQKEKGT 126
Query: 180 ---------------LVILTNTLTTVL---------------EPNPAIGEAAKMCIPTVG 209
+ L + V+ N AI EA ++ I V
Sbjct: 127 LSKYTKKEQLLLERKMAKLQSDFAGVMNFPAAPEALFVVDAVSDNIAIREANRLKIKVVA 186
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
I DSNC+P I YP+PGNDD +I+ +A +G
Sbjct: 187 IADSNCDPTEIDYPIPGNDDAIKSIKILVGAVASAFEEG 225
>gi|209574094|sp|Q0AYK4.2|RS2_SYNWW RecName: Full=30S ribosomal protein S2
Length = 232
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 103/230 (44%), Gaps = 39/230 (16%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + +A VH GH+ + +M YIY R G I DL Q+ + A FV +A
Sbjct: 2 SVVTMKQLLEAGVHFGHQTRRWNPKMATYIYMERNGIYIIDLQQTVKKFDAAYEFVKSVA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
VLFVG Q I + A C + + W GM TN + + R V RL +L
Sbjct: 62 AAGKGVLFVGTKKQAQETIREEASRCGMYFVNQRWLGGMLTNYKTIKRRVLRLKELEKQE 121
Query: 181 -----VILTNTLTT---------------------------VLEPNP---AIGEAAKMCI 205
+L+ V++P A+ EA K+ I
Sbjct: 122 AEGAFEVLSKKEVARLLNERERLERFLGGIKEMDKLPGAVFVVDPRKERIAVAEARKLNI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
P V IVD+NC+P+ I Y +PGNDD A++ A+L+GK+ +Q T
Sbjct: 182 PVVAIVDTNCDPDEIDYVIPGNDDAIRAVKLISSRIADAVLEGKQGEQIT 231
>gi|33152638|ref|NP_873991.1| 30S ribosomal protein S2 [Haemophilus ducreyi 35000HP]
gi|61215715|sp|Q7VL79.1|RS2_HAEDU RecName: Full=30S ribosomal protein S2
gi|33148862|gb|AAP96380.1| 30S ribosomal protein S2 [Haemophilus ducreyi 35000HP]
Length = 238
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 104/224 (46%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM +A VH GH+ + +MKP+I+G R G + +L+++ L +AL + I+
Sbjct: 4 VSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRISSN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
+G VLFVG S ++ A DCQ+F W GM TN + + +++ RL DL T
Sbjct: 64 NGKVLFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQTQD 123
Query: 186 ------------TLTTVLE---------------PNP-----------AIGEAAKMCIPT 207
T LE P+ AI EA + IP
Sbjct: 124 GTFDKITKKEALMRTRELEKLELSLGGIKDMAGLPDAIFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
IVD+N P+ I Y +PGNDD AIQ Y A+ +G+ +
Sbjct: 184 FAIVDTNSTPDGINYIIPGNDDATRAIQLYLDAASAAVKEGRGS 227
>gi|399923809|ref|ZP_10781167.1| 30S ribosomal protein S2 [Peptoniphilus rhinitidis 1-13]
Length = 262
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 39/228 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K++ +A VH GH+ + +MK +I+ R G I DL ++ + + +A +FV +A
Sbjct: 2 SVISMKNLLEAGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQKTVKKVEEAYDFVREVA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
G VLFVG Q IEK A C + W G+ TN + + + + RL L +
Sbjct: 62 ADGGEVLFVGTKKQAQDAIEKEATKCGMPYINQRWLGGLLTNYKTIKKRIDRLYQLYEME 121
Query: 185 NTLT------------------------------------TVLEPNP---AIGEAAKMCI 205
T V++P A+ EA + I
Sbjct: 122 ENGTFEVLPKKEVAQLLHEREKLEKFLGGIKEMNGMPKALFVVDPKKERIAVKEAHILGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P +GIVD+NC+P+ + P+PGNDD A++ + A+++GK+ Q
Sbjct: 182 PVIGIVDTNCDPDEVDIPIPGNDDAIRAVKLITETISNAVIEGKQGSQ 229
>gi|253573553|ref|ZP_04850896.1| 30S ribosomal protein S2 [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251847081|gb|EES75086.1| 30S ribosomal protein S2 [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 232
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 39/229 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M YI+ R G I DL ++ + + +A NFV IA
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVEEAYNFVKRIAE 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
+G +LFVG Q +++ A+ +F + W G TN + + + + RL L
Sbjct: 63 ENGTILFVGTKKQAQDSVKEEAERAGQFYINQRWLGGTLTNFQTIQKRIERLKQLETWEE 122
Query: 181 ------------VILTN-------------------TLTTVLEPNP---AIGEAAKMCIP 206
+IL + V++P A+ EA K+ IP
Sbjct: 123 DGTFSVLPKKEVIILRKEKERLEKFLGGIKNMKSLPSALFVIDPRKERIAVAEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
VGIVD+NC+P+ I Y +PGNDD A++ A+++ + +Q T
Sbjct: 183 IVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVIEAHQGEQTT 231
>gi|223038847|ref|ZP_03609139.1| ribosomal protein S2 [Campylobacter rectus RM3267]
gi|222879820|gb|EEF14909.1| ribosomal protein S2 [Campylobacter rectus RM3267]
Length = 266
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 47/242 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G I DL ++ R N V A
Sbjct: 1 MVTMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYIIDLQKTIRYFRYTYNVVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+LFVG Q +++ A+ C W GM TN
Sbjct: 61 EGKTILFVGTKKQAGATLKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEAMEE 120
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + +PD++ + +T+ + A+ EA +
Sbjct: 121 DGSINLLTKKEALMLRRKKEKLLASLGGIRNLKTVPDMIFVIDTVKEKI----AVAEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+ IP V +D+NC+P+++ +P+PGNDD ++Q +CQ AI++G+ + L E
Sbjct: 177 LKIPVVAPIDTNCDPDVVDFPIPGNDDAIRSVQLFCQEMAEAIIEGRSQLEKDGGELEEG 236
Query: 263 QE 264
+E
Sbjct: 237 KE 238
>gi|407802897|ref|ZP_11149736.1| 30S ribosomal protein S2 [Alcanivorax sp. W11-5]
gi|407023057|gb|EKE34805.1| 30S ribosomal protein S2 [Alcanivorax sp. W11-5]
Length = 249
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ L DAL FV +A
Sbjct: 4 VTMRDMLKAGVHFGHQTRFWNPKMKPFIFGARNKIHIVNLEKTLPLFTDALTFVNRLASS 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
+ +LFVG +I + A C W GM TN
Sbjct: 64 NNKILFVGTKRAAQKVIAEEATRCGMPYVDHRWLGGMLTNWKTIRQSIKRYRDLEAQAAD 123
Query: 167 -----------------SEKLFRAVTRLPDLVILTNTL--TTVLEPNPAIGEAAKMCIPT 207
+KL R++ + D+ L + L V + A+ EA K+ IP
Sbjct: 124 GTFDKLTKKEALMRRREMDKLERSIGGIKDMGGLPDALFVIDVDHEDIAVQEARKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
+ +VD+N NP+ + Y +PGNDD AIQ Y Q AIL+G++
Sbjct: 184 IAVVDTNSNPDGVDYIIPGNDDAIRAIQLYVQAVADAILEGRE 226
>gi|386714362|ref|YP_006180685.1| 30S ribosomal protein S2 [Halobacillus halophilus DSM 2266]
gi|384073918|emb|CCG45411.1| 30S ribosomal protein S2 [Halobacillus halophilus DSM 2266]
Length = 245
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K + +A VH GH+ + +MK YI+ R G I DL ++ + + +A NFV +A
Sbjct: 4 ISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFVKDVAAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
G +LFVG Q + A C + + W G TN E + + + RL D+ +
Sbjct: 64 GGNILFVGTKKQAQDTVRDEATRCGMYYINQRWLGGTLTNFETIRKRINRLKDIERMEED 123
Query: 187 LTT------------------------------------VLEPNP---AIGEAAKMCIPT 207
TT V++P AI EA K+ IP
Sbjct: 124 GTTDVLPKKEVVDMLKEKDRLVKFLGGIKEMKSIPDAMFVIDPRKERIAIAEAHKLDIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
VG+VD+NC+P+ I Y +P NDD A++ A+L+ K+
Sbjct: 184 VGMVDTNCDPDEIDYVIPANDDAIRAVKLLTSKMADAVLEAKQG 227
>gi|162451403|ref|YP_001613771.1| hypothetical protein sce3132 [Sorangium cellulosum So ce56]
gi|209573680|sp|A9GIN6.1|RS2_SORC5 RecName: Full=30S ribosomal protein S2
gi|161161985|emb|CAN93290.1| rpsB [Sorangium cellulosum So ce56]
Length = 278
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 39/225 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + DA VH GH+ + +M+P+IYG R G I DLDQ+ L + A +F+ R G
Sbjct: 15 LRSLLDAGVHFGHQTKRWNPKMRPFIYGARNGIHIIDLDQTTRLFKRAYDFLTDAVGRGG 74
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTLT 188
VLFVG Q ++++ A+ + T W G TN + + + RL L + T
Sbjct: 75 HVLFVGTKRQAQDIVQEEARRAGMYFVTNRWLGGTLTNFRTIKQGLDRLRTLERMKEDGT 134
Query: 189 T------------------------------------VLEPNP---AIGEAAKMCIPTVG 209
V++P+ AI EA K+ +P V
Sbjct: 135 YEQLLKKEVVRLEKERERLEKYLGGLKGMGGLPAAIFVIDPHQESIAISEARKLNVPVVA 194
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
I D+NC+P+L+ + +PGNDD +I+ A ++G + ++D
Sbjct: 195 ITDTNCDPDLVDFVIPGNDDAIRSIRLITARVADACVEGAQRRKD 239
>gi|374671998|emb|CBJ36197.1| 30S ribosomal protein S2 [Candidatus Midichloria mitochondrii]
Length = 256
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 48/223 (21%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
V+ +F+A VH GH+ + +M YIYGVR I +L + +L AL+ + +A ++G
Sbjct: 8 VRQLFEAGVHFGHRRNLWNPKMSQYIYGVRNNMHIVNLKDTYYMLNVALDVLKSVAAKNG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDC-QEFAHTRFWRQGMFTN--------------------- 166
+LFVG Q + ++ + AQ C Q + + R W GM TN
Sbjct: 68 KILFVGTKRQATEVVAENAQKCGQHYVNYR-WPGGMLTNWHTVSRSLKTLEEFEKQLADK 126
Query: 167 ---------------SEKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
E+L R + LPDL+ + +T E AI EA K+ I
Sbjct: 127 DSLLTKKERLNLTKKKERLEKMLGGIRNMNGLPDLIFVIDTN----EQRIAIEEANKLNI 182
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
P + +VD+N + +TY +PGNDD AI+ Y + + ++L+G
Sbjct: 183 PVIAVVDTNASLEGVTYVIPGNDDASKAIELYMNLAQESVLEG 225
>gi|430750283|ref|YP_007213191.1| 30S ribosomal protein S2 [Thermobacillus composti KWC4]
gi|430734248|gb|AGA58193.1| ribosomal protein S2 [Thermobacillus composti KWC4]
Length = 232
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 39/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M+ YI+ R G I DL ++ + + +A NFV +A
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMEKYIFTERNGIYIIDLQKTVKKVEEAYNFVREVAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
G +LFVG Q + + A+ C F + W G TN + + + + RL +L
Sbjct: 63 SGGKILFVGTKKQAQDSVREEAERCGHFYVNQRWLGGTLTNFQTIQKRIDRLRELEKMEE 122
Query: 181 -----------VILTN--------------------TLTTVLEPNP---AIGEAAKMCIP 206
VIL + V++P A+ EA K+ IP
Sbjct: 123 DGTFEVLPKKEVILLRKEKERLEKFLGGIKGMRSLPSALFVIDPRKERIAVAEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
VGIVD+NC+P+ I Y +PGNDD A++ AI++ + ++
Sbjct: 183 IVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTSKMADAIVEANQGEE 229
>gi|119946597|ref|YP_944277.1| 30S ribosomal protein S2 [Psychromonas ingrahamii 37]
gi|166226744|sp|A1SYW3.1|RS2_PSYIN RecName: Full=30S ribosomal protein S2
gi|119865201|gb|ABM04678.1| SSU ribosomal protein S2P [Psychromonas ingrahamii 37]
Length = 244
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 41/229 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + AL+F+ A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNSALDFLEQKAAK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G VLFVG S +++ A C +F W GM TN + + +++ RL DL +
Sbjct: 64 KGKVLFVGTKRAASDAVKEAAISCDQFYVDHRWLGGMLTNWKTVRQSIKRLKDLEVQSQD 123
Query: 183 --------------------LTNTLTTVL---------------EPNPAIGEAAKMCIPT 207
L TL + + AI EA + IP
Sbjct: 124 GTFDKVTKKEALMLARELEKLDKTLGGIKNMGGIPDVIFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTL 256
+ IVD+N P+ I Y VPGNDD AI+ Y + T I G+ +QD +
Sbjct: 184 ISIVDTNSCPDNIDYVVPGNDDAIRAIKLYLEAAATTIKAGR--EQDVI 230
>gi|126208048|ref|YP_001053273.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|166225234|sp|A3MZT2.1|RS2_ACTP2 RecName: Full=30S ribosomal protein S2
gi|126096840|gb|ABN73668.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar
5b str. L20]
Length = 238
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM +A VH GH+ + +MKP+I+G R G + +L+++ L +AL + I+
Sbjct: 4 VSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRISSN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
+G +LFVG S ++ A DCQ+F W GM TN + + +++ RL DL
Sbjct: 64 NGKILFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQTQD 123
Query: 181 -----------VILTNTLTTVL----------------------EPNPAIGEAAKMCIPT 207
++ T L T+ + AI EA + IP
Sbjct: 124 GTFDKITKKEALMRTRELETLELSLGGIKDMAGLPDAIFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
IVD+N P+ + Y +PGNDD AIQ Y A+ +G+ +
Sbjct: 184 FAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDAAAAAVKEGRGS 227
>gi|56459953|ref|YP_155234.1| 30S ribosomal protein S2 [Idiomarina loihiensis L2TR]
gi|61215387|sp|Q5QXS0.1|RS2_IDILO RecName: Full=30S ribosomal protein S2
gi|56178963|gb|AAV81685.1| Ribosomal protein S2 [Idiomarina loihiensis L2TR]
Length = 242
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 39/225 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKPYI+G R I +L+++ + DAL+++ H+A
Sbjct: 4 VSMRDMLKAGVHFGHQTRFWNPKMKPYIFGARNKIHIINLEKTVPMFNDALSYMQHVASN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG + +++ A +C ++ W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAAAEAVKEAAINCGQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETMSQD 123
Query: 183 -----------LTNT------------------LTTVL------EPNPAIGEAAKMCIPT 207
L NT L VL + +I EA + IP
Sbjct: 124 GTFEKLTKKEALVNTREMEKLEKGLGGIKNMGGLPDVLFVIDADHEHISIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V +VD+N NP+ + Y VPGNDD A+Q Y A+ + + A+
Sbjct: 184 VSVVDTNSNPDGVDYIVPGNDDAIRAVQLYLNTAAEAVKEARTAQ 228
>gi|196230880|ref|ZP_03129741.1| ribosomal protein S2 [Chthoniobacter flavus Ellin428]
gi|196225221|gb|EDY19730.1| ribosomal protein S2 [Chthoniobacter flavus Ellin428]
Length = 241
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 110/238 (46%), Gaps = 51/238 (21%)
Query: 71 DMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIV 130
++ +A VH GH+ + +MKPYI+ R I +L ++ E L +A +F++ +A R+G V
Sbjct: 8 ELLEAGVHFGHQTKRWNPKMKPYIFEKRNAIYIINLGKTVEQLSEATDFLSTVAQRNGKV 67
Query: 131 LFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------------ 166
LFVG Q I++ A +F + W G TN
Sbjct: 68 LFVGCKKQAQEAIKEAAIASGQFYVNQRWLGGTLTNLATIRKSIARMKYIENLEKQSEYS 127
Query: 167 -------------SEKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIPT 207
EKL R + +LPD +++ +T + A+ EA ++ IPT
Sbjct: 128 KMGKQEIAAVKREGEKLKRNLEGIRDMEKLPDAIVVIDTTREAI----AVAEAKRLKIPT 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK----KAKQDTLKLLSE 261
V IVD+N +P LI+YP+ GNDD AI+ Q +++ + K Q+ L +SE
Sbjct: 184 VAIVDTNADPELISYPIAGNDDAIRAIRIVLQKLVDSMVSAQTGRTKKDQEALAGVSE 241
>gi|403378775|ref|ZP_10920832.1| protein RpsB [Paenibacillus sp. JC66]
Length = 232
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 39/229 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M YI+ R G I DL ++ + + +A NFV +A
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMDKYIFTERNGIYIIDLQKTVKKVEEAYNFVKSVAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
G +FVG Q +++ A+ C F + W G TN + + + + RL +L
Sbjct: 63 EGGTFMFVGTKKQAQDSVKEEAERCGMFYINQRWLGGTLTNFQTIQKRIDRLHELEKWEE 122
Query: 181 -----------VILTN--------------------TLTTVLEPNP---AIGEAAKMCIP 206
VIL + V++P A+ EA K+ IP
Sbjct: 123 DGTFEVLPKKEVILLRKEKERLEKFLGGIKHMKGLPSALFVIDPRKERIAVAEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
VGIVD+NC+P+ I Y +PGNDD A++ AI++ + +Q T
Sbjct: 183 IVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTAKMAEAIIEANQGEQTT 231
>gi|312879898|ref|ZP_07739698.1| SSU ribosomal protein S2P [Aminomonas paucivorans DSM 12260]
gi|310783189|gb|EFQ23587.1| SSU ribosomal protein S2P [Aminomonas paucivorans DSM 12260]
Length = 284
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 39/225 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + + VH GH+ + +MKP+I+ R G I DL ++ + L A +FV I+
Sbjct: 3 VVSMKQLLECGVHFGHQTRRWNPKMKPFIFTERNGIYIIDLQKTVKGLEKAYDFVREISK 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G +LFVG Q I A +F + W G+ TN + R V R+ +L + N
Sbjct: 63 SGGSILFVGTKRQAQEPIRNEALKSGQFYINQRWLGGLLTNFATIRRRVNRMVELEQMEN 122
Query: 186 TLTT------------------------------------VLEPNP---AIGEAAKMCIP 206
+ +++P A+ EA K+ IP
Sbjct: 123 DGSINRYPKKEIIQLRKEREKLEKYLSGIKDMRETPDALFIIDPRRETIAVQEARKLHIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V IVD+NC+P +I +P+PGNDD AI+ + +A ++G++
Sbjct: 183 VVAIVDTNCDPEVIDFPIPGNDDAIRAIELITGLMSSAFVEGRQG 227
>gi|294677358|ref|YP_003577973.1| 30S ribosomal protein S2 [Rhodobacter capsulatus SB 1003]
gi|294476178|gb|ADE85566.1| 30S ribosomal protein S2 [Rhodobacter capsulatus SB 1003]
Length = 251
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 100/226 (44%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM +IYG R G I DL Q+ +L ALN V + G
Sbjct: 8 LRQLLEAGVHYGHQTQRWNPRMAEFIYGERNGIHIIDLTQTVPMLDAALNVVRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR------------ 176
VLFVG Q + + A+ C ++ W G TN + + +++ R
Sbjct: 68 RVLFVGTKRQAAKAVADAAEKCAQYYMNHRWLGGTLTNWKTVSQSIARLKQIDEIMASGA 127
Query: 177 ------------------------------LPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
LPDL+ + + V + + AI EA K+ IP
Sbjct: 128 EGLTKKERLGMEREQAKLQASLGGIREMGGLPDLLFVID----VSKEDLAILEAQKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V +VD+NC+P + Y +PGNDD AI YC + A L G A+
Sbjct: 184 VVAVVDTNCSPKGVDYIIPGNDDAARAIALYCDLVSRAALDGMSAQ 229
>gi|337750018|ref|YP_004644180.1| 30S ribosomal protein S2 [Paenibacillus mucilaginosus KNP414]
gi|379722867|ref|YP_005314998.1| protein RpsB [Paenibacillus mucilaginosus 3016]
gi|386725645|ref|YP_006191971.1| protein RpsB [Paenibacillus mucilaginosus K02]
gi|336301207|gb|AEI44310.1| RpsB [Paenibacillus mucilaginosus KNP414]
gi|378571539|gb|AFC31849.1| RpsB [Paenibacillus mucilaginosus 3016]
gi|384092770|gb|AFH64206.1| protein RpsB [Paenibacillus mucilaginosus K02]
Length = 232
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 39/229 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M YI+ R G I DL ++ + + +A NFV +A
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVEEAYNFVKSVAG 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL-------- 177
+G +LFVG Q +++ A+ C F + W G TN + + + + RL
Sbjct: 63 ENGTILFVGTKKQAQDSVKEEAERCGMFYINQRWLGGTLTNFQTIQKRIDRLHTLEKWEQ 122
Query: 178 ---------PDLVILTN-------------------TLTTVLEPNP---AIGEAAKMCIP 206
+++IL + V++P A+ EA K+ IP
Sbjct: 123 DGTFEVLPKKEVIILRKEKDRLEKFLGGISHMKGLPSALFVIDPRKERIAVAEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
VGIVD+NC+P+ I Y +PGNDD A++ A+++ + +Q T
Sbjct: 183 IVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTAKIADAVIEAHQGEQTT 231
>gi|402848998|ref|ZP_10897242.1| SSU ribosomal protein S2p (SAe) [Rhodovulum sp. PH10]
gi|402500717|gb|EJW12385.1| SSU ribosomal protein S2p (SAe) [Rhodovulum sp. PH10]
Length = 335
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 41/220 (18%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +MK YI+G R I DL Q+ LL AL ++ R G
Sbjct: 8 MRQLLEAGVHFGHQAHRWNPKMKDYIFGTRNNIHIIDLAQTVPLLHRALQVISDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
+LFVG Q ++ ++A+ C ++ W G TN
Sbjct: 68 RILFVGTKRQAQDIVAESAKRCAQYYVNSRWLGGTLTNWKTISESIKRLRKLEEMLASGE 127
Query: 167 ---------------SEKLFRAVTRLPDLVILTNTLTTVLEPNP---AIGEAAKMCIPTV 208
+KL RA+ + D+ L + L V++ N AI EA ++ IP
Sbjct: 128 AQAYTKKERLTLTRERDKLDRALGGIKDMGGLPD-LLFVIDTNKEGIAIKEAQRLGIPVA 186
Query: 209 GIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+VD+NCNP I++ VPGNDD AI YC + A + G
Sbjct: 187 AVVDTNCNPEGISFLVPGNDDAGRAISLYCDLVSRAAIDG 226
>gi|269469077|gb|EEZ80632.1| ribosomal protein S2 [uncultured SUP05 cluster bacterium]
Length = 321
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 99/221 (44%), Gaps = 38/221 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K M +A VH GH+ +M YIYG R G I +L+++ + D LNF + A +
Sbjct: 6 MKKMLEAGVHFGHRSRFWHPKMDRYIYGTRNGVHIINLEKTLPMFNDMLNFASKTAAQGK 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN--- 185
+LFVG S ++++ A C W GM TN + + ++ RL DL L
Sbjct: 66 SILFVGTKRAASDVMKEEAIRCGMPYVNHRWLGGMMTNYKTIKASIKRLKDLEFLAEENF 125
Query: 186 ---------TLTTVLEP--------------------------NPAIGEAAKMCIPTVGI 210
+T +E AI EA K+ +P +GI
Sbjct: 126 TQFGKKEALMMTREMEKLERSLGGIKDLGGIPDVVFIIDIGHEKNAIREAQKLHLPIIGI 185
Query: 211 VDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
VD+N NP I Y VPGNDD+ AI YY + A+L+ K A
Sbjct: 186 VDTNHNPEGIDYVVPGNDDSIRAISYYAREVANAVLEAKAA 226
>gi|197286131|ref|YP_002152003.1| 30S ribosomal protein S2 [Proteus mirabilis HI4320]
gi|227357250|ref|ZP_03841607.1| 30S ribosomal protein S2 [Proteus mirabilis ATCC 29906]
gi|425069035|ref|ZP_18472151.1| 30S ribosomal protein S2 [Proteus mirabilis WGLW6]
gi|425071436|ref|ZP_18474542.1| 30S ribosomal protein S2 [Proteus mirabilis WGLW4]
gi|238690101|sp|B4F2D3.1|RS2_PROMH RecName: Full=30S ribosomal protein S2
gi|194683618|emb|CAR44518.1| 30S ribosomal protein S2 [Proteus mirabilis HI4320]
gi|227162513|gb|EEI47502.1| 30S ribosomal protein S2 [Proteus mirabilis ATCC 29906]
gi|404598333|gb|EKA98812.1| 30S ribosomal protein S2 [Proteus mirabilis WGLW6]
gi|404599243|gb|EKA99703.1| 30S ribosomal protein S2 [Proteus mirabilis WGLW4]
Length = 241
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL + IA R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALVELNKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG +++ A+ C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRSAVEAVKEAAESCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLESQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRSRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ I Y +PGNDD A++ Y TA+ +G+
Sbjct: 184 FAIVDTNSDPDGIDYIIPGNDDAIRAVKLYLTAAATAVREGR 225
>gi|328948076|ref|YP_004365413.1| 30S ribosomal protein S2 [Treponema succinifaciens DSM 2489]
gi|328448400|gb|AEB14116.1| ribosomal protein S2 [Treponema succinifaciens DSM 2489]
Length = 288
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 39/222 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + ++ VH GH++ D RMK YI+ R G I DL ++ ++D+ + V +A
Sbjct: 3 VVTMKSLLESGVHFGHQVKRWDPRMKKYIFAERNGIHIIDLQKTITAIKDSYDVVRKVAS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVIL-- 183
VLFVG Q I K A+ C + W G TN + +++ RL + +
Sbjct: 63 SGKSVLFVGTKKQAQQAIAKEAERCGMYYVNNRWLGGTLTNFTTIKKSLLRLKKIEKMEV 122
Query: 184 ------------------TNTLTT----------------VLEPNP---AIGEAAKMCIP 206
TLT +++ + A+ EA +M IP
Sbjct: 123 DGTFDKLTKKEVAAYMKEKETLTKNYGGMKDMKELPGAVFIIDTHKEQIAVAEARRMGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
+ IVD+NCNP I YP+PGNDD AI + + A+++
Sbjct: 183 IIAIVDTNCNPEGINYPIPGNDDAIRAISLFTSIIANAVIEA 224
>gi|367008636|ref|XP_003678819.1| mitochondrial 37S ribosomal protein MRP4 [Torulaspora delbrueckii]
gi|359746476|emb|CCE89608.1| hypothetical protein TDEL_0A02760 [Torulaspora delbrueckii]
Length = 404
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 22/214 (10%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V + + A VHLG +P+IYG +G I DL+++ L+ A V +A R
Sbjct: 192 VSINKLLAAGVHLGQSTSLWRSTTQPFIYGEYRGIHIIDLNKTLAYLKRAAKVVEGVAER 251
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLP-------- 178
GI+LF+G +E+ A+ F W G TNS ++ R
Sbjct: 252 GGIILFLGTREGQKRALEEAAKKTHGFYICTRWIPGTLTNSTEISGVWERHEVDFADKPT 311
Query: 179 DLVILTNTLTTVLEP------NP-----AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGN 227
V+ T+ + +++P NP A+ EA ++ IPT+GI+D++ P+++TYP+PGN
Sbjct: 312 GRVLTTDEIAAIVKPDLLVILNPTENRNALNEAMQVRIPTIGIIDTDSEPSIVTYPIPGN 371
Query: 228 DDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSE 261
DD+P ++ V A G++ Q+ L+ +++
Sbjct: 372 DDSPRSVNLLLGVLAKA---GERGLQNRLQKVAQ 402
>gi|335043533|ref|ZP_08536560.1| ribosomal protein S2 [Methylophaga aminisulfidivorans MP]
gi|333790147|gb|EGL56029.1| ribosomal protein S2 [Methylophaga aminisulfidivorans MP]
Length = 250
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 100/224 (44%), Gaps = 47/224 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ M +A VH GH+ + +M PYI+G R I +L+ S + DALNFV+ +A + G
Sbjct: 6 MRQMLEAGVHFGHQTRYWNPKMGPYIFGKRNNIHIINLEHSLPMFNDALNFVSKLASKKG 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
++FVG I + A+ R W GM TN
Sbjct: 66 RIMFVGTKRAAQDAIREDAERAGMPYVNRRWLGGMLTNFQTVRQSIKRLDAIQDMIESGK 125
Query: 167 ---------------SEKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
EKL R +T LPD + + + V AI EA K+ I
Sbjct: 126 TEGLKKKEVLDLAREQEKLEKSIGGIRKMTGLPDAMFVID----VEHERIAIQEARKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
P + +VDSN NP+ + Y +PGNDD+ AI+ Y AIL+G+
Sbjct: 182 PVIAVVDSNSNPDGVDYVIPGNDDSMRAIRLYTANIADAILEGR 225
>gi|157164805|ref|YP_001467386.1| 30S ribosomal protein S2 [Campylobacter concisus 13826]
gi|365154022|ref|ZP_09350456.1| 30S ribosomal protein S2 [Campylobacter sp. 10_1_50]
gi|416116105|ref|ZP_11594356.1| SSU ribosomal protein S2p (SAe) [Campylobacter concisus UNSWCD]
gi|166225253|sp|A7ZF28.1|RS2_CAMC1 RecName: Full=30S ribosomal protein S2
gi|112801952|gb|EAT99296.1| ribosomal protein S2 [Campylobacter concisus 13826]
gi|363650734|gb|EHL89821.1| 30S ribosomal protein S2 [Campylobacter sp. 10_1_50]
gi|384577499|gb|EIF06781.1| SSU ribosomal protein S2p (SAe) [Campylobacter concisus UNSWCD]
Length = 262
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 102/227 (44%), Gaps = 47/227 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G I DL ++ R N V A
Sbjct: 1 MVTMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYIIDLQKTIRYFRYTYNIVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
VLFVG Q I++ A+ C W GM TN
Sbjct: 61 EGKSVLFVGTKKQAIDAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIETMEE 120
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + LPD++ + +T+ + A+ EA +
Sbjct: 121 DGSINLLTKKEALMLRRKKEKLIATLGGIRNMKSLPDMIFVVDTVKEKI----AVQEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+ IP V +D+NC+P+++ YP+PGNDD ++Q +CQ AI +GK
Sbjct: 177 LKIPVVAPIDTNCDPDVVDYPIPGNDDAIRSVQLFCQEMAEAINEGK 223
>gi|51892629|ref|YP_075320.1| 30S ribosomal protein S2 [Symbiobacterium thermophilum IAM 14863]
gi|61215498|sp|Q67PB7.1|RS2_SYMTH RecName: Full=30S ribosomal protein S2
gi|51856318|dbj|BAD40476.1| 30S ribosomal protein S2 [Symbiobacterium thermophilum IAM 14863]
Length = 264
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +MK YI+ R G I DL ++ ++ A N V +A
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKEYIFTERNGIYIIDLQKTVRMVEIAYNAVRQMA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
G +LF+G Q + + A+ C F + W GM TN E + + + RL +L +
Sbjct: 62 ADGGKILFIGTKKQAQDAVREEAERCGMFYVNQRWLGGMLTNFETIKKRIARLNELEEIE 121
Query: 185 NT------------------------------------LTTVLEPNP---AIGEAAKMCI 205
T + V++P A+ E K+ I
Sbjct: 122 GTEYWSKLTKKEQAQLLHEKEKLEKNLGGIKGMKSLPDMAFVIDPRRERIAVSELRKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
P V IVD+NC+P+ I Y +PGNDD A++ A+++G++
Sbjct: 182 PIVAIVDTNCDPDEIDYVIPGNDDAIRAVKLLTSKIADAVIEGRQG 227
>gi|238854752|ref|ZP_04645082.1| ribosomal protein S2 [Lactobacillus jensenii 269-3]
gi|260663984|ref|ZP_05864837.1| ribosomal protein S2 [Lactobacillus jensenii SJ-7A-US]
gi|313472272|ref|ZP_07812764.1| ribosomal protein S2 [Lactobacillus jensenii 1153]
gi|238832542|gb|EEQ24849.1| ribosomal protein S2 [Lactobacillus jensenii 269-3]
gi|239529671|gb|EEQ68672.1| ribosomal protein S2 [Lactobacillus jensenii 1153]
gi|260561870|gb|EEX27839.1| ribosomal protein S2 [Lactobacillus jensenii SJ-7A-US]
Length = 257
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + +A VH GH+ D +MKPYI+ R G I DL ++ ++L DA N+V +A
Sbjct: 2 SVVTMKQLLEAGVHFGHQTRRWDPKMKPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAVA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
DG+ LFVG Q I++ A ++ + W G TN + V RL L ++
Sbjct: 62 QNDGVFLFVGTKKQAQEAIKEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKQLKAMS 121
Query: 185 NTLTTVLEPNP---------------------------------------AIGEAAKMCI 205
T L P A+ EA K+ I
Sbjct: 122 EDGTFDLLPKKEVALLTKEMDKLQRFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
P V +VD+N +P I +P NDD AI+ A+++GK+ + D
Sbjct: 182 PVVAMVDTNTDPTPIDVIIPANDDAIRAIRLIAGAMADAVIEGKQGEDD 230
>gi|153875861|ref|ZP_02003471.1| Ribosomal protein S2 [Beggiatoa sp. PS]
gi|152067675|gb|EDN66529.1| Ribosomal protein S2 [Beggiatoa sp. PS]
Length = 260
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ M +A VH GH+ + +M PYI+G R I +L+ S + DA NF+ +A R G
Sbjct: 1 MRQMLEAGVHFGHQTRYWNPKMGPYIFGERNKIHIINLEHSLPMYNDAGNFLGKLAARKG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN--- 185
+LFVG +++ A C R W GM TN + + ++ RL DL ILT
Sbjct: 61 AILFVGTKRAAQDPVKEAALRCGMPYVNRRWLGGMLTNYKTVKASIKRLKDLEILTQDGT 120
Query: 186 ----------TLTTVLE---------------PNP-----------AIGEAAKMCIPTVG 209
+LT L P+ A+ EA K+ IP VG
Sbjct: 121 LHRITKKEALSLTRELAKLERSLGGIKDMNVLPDALFIIDVGYEKIAVQEAVKLGIPVVG 180
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+VD+N NP + Y +PGNDD AI Y I++ ++A
Sbjct: 181 VVDTNNNPENVDYIIPGNDDAIRAITLYVNGMADTIIESRQA 222
>gi|164454441|dbj|BAF96777.1| ribosomal protein S2 [Shewanella livingstonensis]
Length = 311
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 109/242 (45%), Gaps = 47/242 (19%)
Query: 60 YFQVRNL--VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDAL 117
Y +V + V ++DM A VH GH+ + +MKP+I+G R G I +L+ + + +AL
Sbjct: 64 YIKVNTMTTVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEAL 123
Query: 118 NFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL 177
F+++IA + G VLFVG I+ +A C ++ W GM TN + + +++ RL
Sbjct: 124 AFISNIASKKGKVLFVGTKRAAGEAIKASALSCDQYYVDHRWLGGMLTNWKTVRQSIKRL 183
Query: 178 PDL---------------------------------VILTNTLTTVL------EPNPAIG 198
+L + L VL + AI
Sbjct: 184 KELESQSVDGTFDKLTKKEALMRSRELDKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIK 243
Query: 199 EAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK------KAK 252
EA + IP V +VD+N P+ + Y VPGNDD AI+ Y A G+ +A+
Sbjct: 244 EANNLGIPVVAVVDTNSAPDGVNYIVPGNDDAMRAIRLYTSSVAAAANAGRGQDLAVQAE 303
Query: 253 QD 254
QD
Sbjct: 304 QD 305
>gi|386285507|ref|ZP_10062722.1| 30S ribosomal protein S2 [Sulfurovum sp. AR]
gi|385343618|gb|EIF50339.1| 30S ribosomal protein S2 [Sulfurovum sp. AR]
Length = 315
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 49/230 (21%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +KD+ + VH GH+ + +MK +I+G R+ I DL ++ + N V A
Sbjct: 1 MVTMKDLLECGVHFGHQTRRWNPKMKKFIFGARKNIYIIDLQKTLRYFKYTYNVVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDC-QEFAHTRFWRQGMFTN------------------ 166
VLFVG Q I++ A+ C + TR W GM TN
Sbjct: 61 EGQTVLFVGTKKQARQAIKEHAERCGMPYVSTR-WLGGMLTNYPTMKKSIRKLEIIEQME 119
Query: 167 -------------------SEKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAA 201
EKL FR + +LPD++ + +++ + + A+ EA
Sbjct: 120 ETGQINLLTKKEALMLKRKKEKLSSYLEGFRHMKKLPDMMFVIDSV----KEHIAVKEAR 175
Query: 202 KMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
++ + V +D+NC+P+++ YP+PGNDD +I +CQ AI++GK A
Sbjct: 176 RLGMKVVAPLDTNCDPDMVDYPIPGNDDAIRSINLFCQEMAEAIIEGKAA 225
>gi|256851269|ref|ZP_05556658.1| ribosomal protein S2 [Lactobacillus jensenii 27-2-CHN]
gi|260660693|ref|ZP_05861608.1| ribosomal protein S2 [Lactobacillus jensenii 115-3-CHN]
gi|297206136|ref|ZP_06923531.1| 30S ribosomal protein S2 [Lactobacillus jensenii JV-V16]
gi|256616331|gb|EEU21519.1| ribosomal protein S2 [Lactobacillus jensenii 27-2-CHN]
gi|260548415|gb|EEX24390.1| ribosomal protein S2 [Lactobacillus jensenii 115-3-CHN]
gi|297149262|gb|EFH29560.1| 30S ribosomal protein S2 [Lactobacillus jensenii JV-V16]
Length = 260
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + +A VH GH+ D +MKPYI+ R G I DL ++ ++L DA N+V +A
Sbjct: 2 SVVTMKQLLEAGVHFGHQTRRWDPKMKPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAVA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
DG+ LFVG Q I++ A ++ + W G TN + V RL L ++
Sbjct: 62 QNDGVFLFVGTKKQAQEAIKEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKQLKAMS 121
Query: 185 NTLTTVLEPNP---------------------------------------AIGEAAKMCI 205
T L P A+ EA K+ I
Sbjct: 122 EDGTFDLLPKKEVALLTKEMDKLQRFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
P V +VD+N +P I +P NDD AI+ A+++GK+ + D
Sbjct: 182 PVVAMVDTNTDPTPIDVIIPANDDAIRAIRLIAGAMADAVIEGKQGEDD 230
>gi|114566417|ref|YP_753571.1| 30S ribosomal protein S2 [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337352|gb|ABI68200.1| SSU ribosomal protein S2P [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 236
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 101/230 (43%), Gaps = 39/230 (16%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + +A VH GH+ + +M YIY R G I DL Q+ + A FV +A
Sbjct: 6 SVVTMKQLLEAGVHFGHQTRRWNPKMATYIYMERNGIYIIDLQQTVKKFDAAYEFVKSVA 65
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
VLFVG Q I + A C + + W GM TN + + R V RL +L
Sbjct: 66 AAGKGVLFVGTKKQAQETIREEASRCGMYFVNQRWLGGMLTNYKTIKRRVLRLKELEKQE 125
Query: 181 ------VILTNTLTTVLEPNP-----------------------------AIGEAAKMCI 205
V+ + +L A+ EA K+ I
Sbjct: 126 AEGAFEVLSKKEVARLLNERERLERFLGGIKEMDKLPGAVFVVDPRKERIAVAEARKLNI 185
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
P V IVD+NC+P+ I Y +PGNDD A++ A+L+GK+ +Q T
Sbjct: 186 PVVAIVDTNCDPDEIDYVIPGNDDAIRAVKLISSRIADAVLEGKQGEQIT 235
>gi|82409855|gb|ABB73964.1| SSU ribosomal protein S2P [Nitrosospira multiformis ATCC 25196]
Length = 260
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 103/223 (46%), Gaps = 41/223 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ +M PYI+G R I +L+++ + ++A+N+V +A
Sbjct: 15 VTMRQMLEAGVHFGHQTRFWSPKMAPYIFGHRNKIHIINLEKTLVMYQEAMNYVRQLAAN 74
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQE-FAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G +LFVG Q ++ + A C F R W GM TN + + ++V RL D+ +
Sbjct: 75 KGTILFVGTKRQARDIVREEAMRCGSPFVDQR-WLGGMLTNFKTIKQSVKRLHDMETMME 133
Query: 186 TLT---------------------------------------TVLEPNPAIGEAAKMCIP 206
T V AI EA K+ IP
Sbjct: 134 DGTLDKLSKKEALDLQRELEKLNRSLGGIKDMKNLPDAMFVIDVGYQKGAITEARKLGIP 193
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
VGIVDSN +P + Y +PGNDD+ AI+ Y + AIL+G+
Sbjct: 194 IVGIVDSNHSPAGVDYVIPGNDDSSQAIRLYARGVADAILEGR 236
>gi|374307614|ref|YP_005054045.1| 30S ribosomal protein S2 [Filifactor alocis ATCC 35896]
gi|320120341|gb|EFE28420.2| 30S ribosomal protein S2 [Filifactor alocis ATCC 35896]
Length = 252
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 39/229 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
N+V ++ + +A VH GH+ + +M +I+ R G I DL ++ + + +A FV+ +A
Sbjct: 3 NVVSMRQLLEAGVHFGHQTRRWNPKMAKFIFTERNGIYIIDLQKTVKKIEEAYEFVSTVA 62
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
+LFVG Q I++ A+ C + W GM TN + + + RL +L +
Sbjct: 63 AEGKPILFVGTKKQAQDAIKEEAERCGMYYVNERWLGGMLTNYKTIRTRIDRLRELEAMQ 122
Query: 185 NTLTTVLEPNP---------------------------------------AIGEAAKMCI 205
T L P AI EA + I
Sbjct: 123 EDGTFDLLPKKEVMQLLHEKSKLVKYLDGIKDMPELPGAIFIVDPRKERIAIKEAQNLGI 182
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
P +GI+D+NC+P+ I YP+PGNDD A++ V A+++ K+ + +
Sbjct: 183 PLIGIIDTNCDPDEIDYPIPGNDDAIRAVKLITSVISQAVIEAKQGEMN 231
>gi|162139865|ref|YP_411356.2| 30S ribosomal protein S2 [Nitrosospira multiformis ATCC 25196]
gi|209573698|sp|Q2YBA7.2|RS2_NITMU RecName: Full=30S ribosomal protein S2
Length = 248
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 103/223 (46%), Gaps = 41/223 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ +M PYI+G R I +L+++ + ++A+N+V +A
Sbjct: 3 VTMRQMLEAGVHFGHQTRFWSPKMAPYIFGHRNKIHIINLEKTLVMYQEAMNYVRQLAAN 62
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQE-FAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G +LFVG Q ++ + A C F R W GM TN + + ++V RL D+ +
Sbjct: 63 KGTILFVGTKRQARDIVREEAMRCGSPFVDQR-WLGGMLTNFKTIKQSVKRLHDMETMME 121
Query: 186 TLT---------------------------------------TVLEPNPAIGEAAKMCIP 206
T V AI EA K+ IP
Sbjct: 122 DGTLDKLSKKEALDLQRELEKLNRSLGGIKDMKNLPDAMFVIDVGYQKGAITEARKLGIP 181
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
VGIVDSN +P + Y +PGNDD+ AI+ Y + AIL+G+
Sbjct: 182 IVGIVDSNHSPAGVDYVIPGNDDSSQAIRLYARGVADAILEGR 224
>gi|313888298|ref|ZP_07821969.1| ribosomal protein S2 [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845701|gb|EFR33091.1| ribosomal protein S2 [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 257
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 39/228 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +MK +I+ R G I DL ++ + + +A +FV +A
Sbjct: 2 SVISMKSLLEAGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQKTVKKVEEAYDFVREVA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
G VLFVG Q IEK A C + W G+ TN + + + RL L +
Sbjct: 62 ANGGEVLFVGTKKQAQDAIEKEATKCGMPYINQRWLGGLLTNYKTIKNRIERLYKLYEME 121
Query: 185 NTLT------------------------------------TVLEP---NPAIGEAAKMCI 205
T V++P N A+ EA + I
Sbjct: 122 ENGTFDVLPKKEVAQLLHEREKLEKFLGGIKEMKGMPKALFVVDPKKENIAVKEAHILGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P +GIVD+NC+P + P+PGNDD A++ + A+++GK+ Q
Sbjct: 182 PVIGIVDTNCDPEEVDIPIPGNDDAIRAVKLITETIANAVIEGKQGSQ 229
>gi|261344736|ref|ZP_05972380.1| ribosomal protein S2 [Providencia rustigianii DSM 4541]
gi|282567178|gb|EFB72713.1| ribosomal protein S2 [Providencia rustigianii DSM 4541]
Length = 241
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL + IA R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A C ++ W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELVKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ I + +PGNDD AI+ Y + +G+
Sbjct: 184 FAIVDTNSDPDGIDFVIPGNDDAIRAIKLYLGAVANTVREGR 225
>gi|426200511|gb|EKV50435.1| hypothetical protein AGABI2DRAFT_200133 [Agaricus bisporus var.
bisporus H97]
Length = 299
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 91/183 (49%), Gaps = 10/183 (5%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+ + H GH ++ PY YG R G I DLDQ+ LLR A N V +A G ++
Sbjct: 95 LLASGAHFGHASTRMNPNFIPYAYGTRAGITIIDLDQTLPLLRRAANLVRAVAKSRGSIV 154
Query: 132 FVGQSAQNSLLIEKTAQDC--QEFAHTRFWRQGMFTNSEKLFRA-VTRL---PDLVILTN 185
F+G +++K A+ Q ++ W G TN + F + V +L PDLVI+ N
Sbjct: 155 FIGTRPDLQPVVQKAARRLGNQGYSVGDRWLPGTLTNRQHFFGSDVNKLKIIPDLVIILN 214
Query: 186 TLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAI 245
+ + AI E A +PT+GIVDSN +P ++ YP+P ND+ + V A
Sbjct: 215 PMKNM----SAIRECAMEHVPTIGIVDSNVDPRIVMYPIPANDENTRTAELIAGVLSIAG 270
Query: 246 LKG 248
+G
Sbjct: 271 REG 273
>gi|303325621|ref|ZP_07356064.1| ribosomal protein S2 [Desulfovibrio sp. 3_1_syn3]
gi|345892207|ref|ZP_08843030.1| 30S ribosomal protein S2 [Desulfovibrio sp. 6_1_46AFAA]
gi|302863537|gb|EFL86468.1| ribosomal protein S2 [Desulfovibrio sp. 3_1_syn3]
gi|345047346|gb|EGW51211.1| 30S ribosomal protein S2 [Desulfovibrio sp. 6_1_46AFAA]
Length = 263
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 39/235 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K M + VH GH+ + +M+PYI+G R G I DL Q+ +L R A + + +
Sbjct: 4 VSMKQMLETGVHFGHQTRRWNPKMRPYIFGARNGIHIIDLQQTVKLFRVAHDKIVDTVAK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLF+G Q + A +F T W G TN + ++V RL L
Sbjct: 64 GGKVLFIGTKRQAQEAVAAEAGRANQFHVTNRWMGGTLTNFVTIQKSVDRLKKLEAMFAD 123
Query: 181 ----------VILTN--------------------TLTTVLEPNP---AIGEAAKMCIPT 207
++L L +++PN A+ E K+ IP
Sbjct: 124 GSINRYQKKEILLLEREMKKLEETLGGIKNMDRLPQLAFIIDPNREDIAVKECRKLGIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
V + D+NC+P+LI Y +PGNDD AI+ + F A L+G+ +D ++ +E+
Sbjct: 184 VAVTDTNCDPDLIDYIIPGNDDAIRAIKLFVAAFSEACLEGEAMSKDHKEVNAEE 238
>gi|268590532|ref|ZP_06124753.1| ribosomal protein S2 [Providencia rettgeri DSM 1131]
gi|291314118|gb|EFE54571.1| ribosomal protein S2 [Providencia rettgeri DSM 1131]
Length = 241
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL + IA R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A C ++ W GM TN + + +++ RL DL +
Sbjct: 64 KGKILFVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEVQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ I + +PGNDD AI+ Y + + +G+
Sbjct: 184 FAIVDTNSDPDGIDFVIPGNDDAIRAIKLYLGAVASTVREGR 225
>gi|384109521|ref|ZP_10010395.1| ribosomal protein S2 [Treponema sp. JC4]
gi|383868922|gb|EID84547.1| ribosomal protein S2 [Treponema sp. JC4]
Length = 288
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 39/221 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K++ ++ VH GH++ D RMK YI+ R G I DL ++ ++D + V +
Sbjct: 3 VVTMKNLLESGVHFGHQVKRWDPRMKKYIFAERNGIHIIDLQKTIAAIKDGYDEVRKVTA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL--VIL 183
+LFVG Q ++K A+ C F W GM TN + +++ RL + + +
Sbjct: 63 AGKSILFVGTKKQAQQAVQKEAERCGMFYVNNRWLGGMLTNFSTIKKSLQRLKKIEKMEI 122
Query: 184 TNTLTTV--------------LEPN-----------------------PAIGEAAKMCIP 206
T + LE N A+ EA +M IP
Sbjct: 123 DGTFENLTKKEVASLQKEKAKLEKNLGGIKEMKELPGALFVIDTHKEQIAVAEARRMGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILK 247
+ +VD+NCNP I +P+PGNDD AI + + A+++
Sbjct: 183 IIAVVDTNCNPEGIDFPIPGNDDAIRAITLFTSIIANAVIE 223
>gi|255263690|ref|ZP_05343032.1| ribosomal protein S2 [Thalassiobium sp. R2A62]
gi|255106025|gb|EET48699.1| ribosomal protein S2 [Thalassiobium sp. R2A62]
Length = 264
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 99/226 (43%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M+ YIYG R G I DL Q+ +L ALN V + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPKMQQYIYGSRNGIHIMDLTQTVPMLDAALNVVRETVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q I A+ ++ W G TN + + +++ RL
Sbjct: 68 RVLFVGTKRQAQRPIADAAEKSAQYYMNHRWLGGTLTNWQTVSQSINRLKSIDEAMETGF 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + V + + AI EA K+ IP
Sbjct: 128 EGLTKKERLGMERDQGKLQASLGGIREMGGVPDLLFVID----VRKEDLAIAEAKKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V +VD+NC+P+ + Y +PGNDD AI Y + A L G A+
Sbjct: 184 VVAVVDTNCSPDGVDYVIPGNDDAARAIALYTDLVARAALDGMTAQ 229
>gi|169854163|ref|XP_001833758.1| mitochondrial 37S ribosomal protein MRP4 [Coprinopsis cinerea
okayama7#130]
gi|116505155|gb|EAU88050.1| mitochondrial ribosomal protein subunit S2 [Coprinopsis cinerea
okayama7#130]
Length = 308
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+ + A H GH ++ PY YG R G I DLD + LLR A N +A G
Sbjct: 98 ISALLAAGAHFGHASSRMNPNFMPYAYGTRAGITIIDLDSTLPLLRRAANVTRAVARAGG 157
Query: 129 IVLFVGQSAQNSLLIEKTAQDC---QEFAHTRFWRQGMFTNSEKLFRA-----VTRLPDL 180
+LF+G +++K A+ Q + W G TN + FR +PDL
Sbjct: 158 QILFIGTRPDLKPIVQKAAERVGPEQGYYVGDRWLPGTLTNRREFFRPEQLANTNVIPDL 217
Query: 181 VILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQV 240
I+ N + AI E A +PT+GI+DSN +P L+ YP+P ND+ A + V
Sbjct: 218 AIILNPVQNA----NAIREFAVENVPTIGIIDSNVDPRLVMYPIPANDENTRAAELIGGV 273
Query: 241 FKTAILKGKKAK-QDTLKLLSEKQE 264
A +G + + Q+ + L ++Q+
Sbjct: 274 LSIAAREGVELREQEDMARLKQQQK 298
>gi|445423899|ref|ZP_21436806.1| ribosomal protein S2 [Acinetobacter sp. WC-743]
gi|444755220|gb|ELW79812.1| ribosomal protein S2 [Acinetobacter sp. WC-743]
Length = 250
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++D+ A H GH+ + +M+ YI+G R I +L+ + L DALNFV ++A +
Sbjct: 6 VSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNRIHIINLEHTVPALNDALNFVNNLASK 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
VLFVG S +I + AQ + W GM TN + L +++ RL DL +
Sbjct: 66 KNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGMLTNWKTLRQSINRLKDLQTQSQD 125
Query: 186 ------TLTTVLE---------------------PNP-----------AIGEAAKMCIPT 207
T LE P+ AI EA + IP
Sbjct: 126 GTFAKLTKREALERTREMEKLERSLGGVKNMGGLPDALFIIDVDHEAIAIKEAKNLGIPV 185
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+GIVD+N NP+ + + +PGNDD A+ Y AI+ GK+ Q
Sbjct: 186 IGIVDTNSNPDNVDFVIPGNDDAIRAVTLYASAMADAIIAGKEYAQ 231
>gi|373454689|ref|ZP_09546553.1| 30S ribosomal protein S2 [Dialister succinatiphilus YIT 11850]
gi|371935552|gb|EHO63297.1| 30S ribosomal protein S2 [Dialister succinatiphilus YIT 11850]
Length = 257
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 39/228 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + +A VH GH+ + +M +I+ R G I DL ++ + + +A F+ +A
Sbjct: 2 SVVSMKQLLEAGVHFGHQTRRWNPKMARFIFTERNGIYIIDLQKTVKKVEEAYAFIRDVA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
+ +LFVG Q+ +++ A C +F W GM TN + + RL +L
Sbjct: 62 AKGEPILFVGTKKQSQNSVKEEATRCNQFYVNERWLGGMLTNFRTIQTRINRLKELEKMF 121
Query: 181 ------------VILTNTLTTVLEPN-----------------------PAIGEAAKMCI 205
VIL LE N A+ EA K+ I
Sbjct: 122 EEGTTDQYPKKEVILMKRELEKLEKNLGGIKDMKRLPGAIFIIDSKKEEIAVSEAHKLHI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P V VD+NC+P++I YP+P NDD A++ A+L+G++ +Q
Sbjct: 182 PVVATVDTNCDPDVIDYPIPANDDAIRAVRLLTSKMADAVLEGRQGQQ 229
>gi|187928367|ref|YP_001898854.1| 30S ribosomal protein S2 [Ralstonia pickettii 12J]
gi|238691812|sp|B2UB06.1|RS2_RALPJ RecName: Full=30S ribosomal protein S2
gi|187725257|gb|ACD26422.1| ribosomal protein S2 [Ralstonia pickettii 12J]
Length = 247
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 41/223 (18%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +++M +A VH GH+ + +M P+I+G R I +L+++ + +DAL +V +A
Sbjct: 3 VTMREMLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYQDALKYVRQLAAN 62
Query: 127 DGIVLFVGQSAQN-SLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI--- 182
G +LFVG Q+ +L E+ A+ F +R W GM TN + + ++ RL D+ +
Sbjct: 63 RGTILFVGTKRQSREILAEEAARAGMPFVDSR-WLGGMLTNFKTVKTSIKRLKDMEVAKE 121
Query: 183 ---------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIP 206
L ++ + + P+ A+ EAAK+ IP
Sbjct: 122 AGATETMSKKEALMFEREMDKLVKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIP 181
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+G+VD+N +P I Y +PGNDD+ A+ Y + AIL+G+
Sbjct: 182 VIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>gi|440232130|ref|YP_007345923.1| ribosomal protein S2 [Serratia marcescens FGI94]
gi|440053835|gb|AGB83738.1| ribosomal protein S2 [Serratia marcescens FGI94]
Length = 241
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + DAL ++ I+ R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELSKISAR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S ++ A +C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVKDAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELQKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A+ Y A+ +G+
Sbjct: 184 FSIVDTNSDPDGVDFIIPGNDDAIRAVNLYLTAVAAAVREGR 225
>gi|338739695|ref|YP_004676657.1| 30S ribosomal protein S2 [Hyphomicrobium sp. MC1]
gi|337760258|emb|CCB66089.1| 30S ribosomal protein S2 [Hyphomicrobium sp. MC1]
Length = 329
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 100/228 (43%), Gaps = 45/228 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M P+IYG R I DL Q+ LL AL V+ G
Sbjct: 8 MRQLLEAGVHFGHQAHRWNPKMAPFIYGSRNKIHILDLTQTVPLLHQALLKVSDTVAGGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFV Q S I A+ ++ W G TN + + +++ RL
Sbjct: 68 RVLFVATKRQASDGIADAAKRSAQYFINHRWLGGTLTNWKTVSQSIRRLRQLDDILADPQ 127
Query: 178 ------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIPT 207
PDL+++ +T + AI EA K+ IP
Sbjct: 128 GRTKKEILNLTRERDKLNQSLGGIKDMGGTPDLLVVIDTNKESI----AIQEARKLNIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V IVD+NC+P+ I YPVPGNDD AI YC + A L G + Q +
Sbjct: 184 VAIVDTNCDPDGIDYPVPGNDDAGRAITLYCDLMARAALDGLERSQGS 231
>gi|333994621|ref|YP_004527234.1| 30S ribosomal protein S2 [Treponema azotonutricium ZAS-9]
gi|333734252|gb|AEF80201.1| ribosomal protein S2 [Treponema azotonutricium ZAS-9]
Length = 297
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 47/223 (21%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + ++ VH GH++ D RMK YI+ R G I DL ++ + ++DA + V +
Sbjct: 3 VVTMKSLLESGVHFGHQVKRWDPRMKKYIFAERNGIHIIDLQKTIQSIKDAYDAVRKVVA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------S 167
VLFVG Q I+K A+ C + W GM TN
Sbjct: 63 SGKTVLFVGTKKQAQQAIQKEAERCGMYYVNNRWLGGMLTNFVTIKKSLLRLKKLEKMEV 122
Query: 168 EKLFRAVTRL-------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
+ F +T+ P ++ + +T + A+ EA +
Sbjct: 123 DGTFENLTKKEISGLGKERAKLQKNLGGIKEMKDPPGILFIIDTRKEGI----AVAEARR 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAI 245
M IP V +VD+NCNP I YP+PGNDD AI + Q+ A+
Sbjct: 179 MGIPIVAVVDTNCNPEGIDYPIPGNDDAIRAITLFTQIIANAV 221
>gi|302339355|ref|YP_003804561.1| 30S ribosomal protein S2 [Spirochaeta smaragdinae DSM 11293]
gi|301636540|gb|ADK81967.1| ribosomal protein S2 [Spirochaeta smaragdinae DSM 11293]
Length = 300
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + ++ VH GH+ D RMK YI+ R G I DL ++ +++A + V
Sbjct: 2 SVVSMKSLLESGVHFGHQTKRWDPRMKKYIFAERNGIHIIDLQKTIVKIKEAYDMVREQV 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
+LFVG Q IE A+ C F W GM TN + +++ RL +
Sbjct: 62 KEGRSILFVGTKKQAQQAIESEAKRCGMFYVNNRWLGGMLTNFTTIKKSIHRLKKIEKME 121
Query: 181 ------------VILTNTLTTVLEPN-----------------------PAIGEAAKMCI 205
+ N + LE N A+ EA +M I
Sbjct: 122 VDGTFESLTKKEIAKLNKERSRLEKNLGGIKEMKDLPGAIFIIDTRKESIAVAEARRMGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAIL 246
P + +VD+NCNP+++ +P+PGNDD AI + +V A++
Sbjct: 182 PIIAVVDTNCNPDVVDFPIPGNDDAIRAITLFTKVISDAVI 222
>gi|244539022|dbj|BAH83065.1| 30S ribosomal protein S2 [Candidatus Ishikawaella capsulata Mpkobe]
Length = 236
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++DM A VH GH+ +M+P+I+GV I DL+++ + + AL + I
Sbjct: 4 ISMRDMLKAGVHFGHQKRYWHPKMQPFIFGVYNKIHIIDLEKTVLMFKLALTELKKIVSH 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
DG +LFVG S +E+TA C++F T W GM TN + + +++ RL +L I
Sbjct: 64 DGKILFVGTKKSASAAVEETAIICKQFFVTHRWLGGMLTNWKTVRQSIKRLKELEIQSKD 123
Query: 183 --------------------LTNTLTTVLE---------------PNPAIGEAAKMCIPT 207
L +L + + + A+ EA + IP
Sbjct: 124 GTFLQLTKKEAIIRARELSKLQKSLGGIKDMGGLPDALFVIDASHEHIAVQEANHLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAI 245
IVD+N NP+ I + +PGNDD +I +Y + K+ I
Sbjct: 184 FAIVDTNSNPDGINFIIPGNDDAMRSINFYLSIIKSVI 221
>gi|261419449|ref|YP_003253131.1| 30S ribosomal protein S2 [Geobacillus sp. Y412MC61]
gi|261375906|gb|ACX78649.1| ribosomal protein S2 [Geobacillus sp. Y412MC61]
Length = 235
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 41/229 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +MK YI+ R G I DL ++ E + +A NFV +A
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVEKVEEAYNFVRELA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------ 166
G +LFVG Q +++ A+ C F + W G TN
Sbjct: 62 ANGGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLREIEKME 121
Query: 167 -------------------SEKLFRAVTRLPDLVILTNTLTTVLEPNP---AIGEAAKMC 204
E+L + + + D+ L + L V++P A+ EA K+
Sbjct: 122 EDGIFDVLPKKEVIRLKKEKERLEKFLGGIKDMKELPDAL-FVIDPRKERIAVAEARKLN 180
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
IP +GIVD+NC+P+ I Y +P NDD A++ A+L+ K+ ++
Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAKQGEE 229
>gi|161510961|ref|YP_089125.2| 30S ribosomal protein S2 [Mannheimia succiniciproducens MBEL55E]
gi|61215477|sp|Q65R70.2|RS2_MANSM RecName: Full=30S ribosomal protein S2
Length = 242
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 109/235 (46%), Gaps = 39/235 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+IYG R G I +L+++ + AL + IA
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIYGPRNGVHIINLEKTVPMFNGALAELTRIASN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
+G +LFVG + ++ A DCQ++ W GM TN + + +++ RL DL
Sbjct: 64 NGKILFVGTKRAATEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 183 -----LTNTLTTV-------LE------------PNP-----------AIGEAAKMCIPT 207
LT V LE P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALVRTREMEKLELSLGGIKDMAGLPDAIFVIGADYEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+VD+N NP+ I + +PGNDD AIQ Y A+ +G+ + T + +E+
Sbjct: 184 FAVVDTNSNPDGIDFVIPGNDDATRAIQLYVTAAAAAVKEGRSQQTATEEKFAEE 238
>gi|260892479|ref|YP_003238576.1| 30S ribosomal protein S2 [Ammonifex degensii KC4]
gi|260864620|gb|ACX51726.1| ribosomal protein S2 [Ammonifex degensii KC4]
Length = 243
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 101/229 (44%), Gaps = 47/229 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M PYI+ R G I DL ++ + L +A FV +A
Sbjct: 3 IVTMKQLLEAGVHFGHQTRRWNPKMAPYIFTDRNGIYIIDLQKTLKKLEEAYYFVRDLAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS------------------ 167
+ G +LFVG Q IE+ A C F + W GM TN
Sbjct: 63 QGGTILFVGTKRQAQQTIEEEATRCGMFFVNQRWLGGMLTNFQTIKRRIERLRELEEMEA 122
Query: 168 ----------------------EKLFRAVTRLPDLVILTNTLTTVLEPNP---AIGEAAK 202
EK FR V + L + V++P A+ EA K
Sbjct: 123 NGEIDLRPRKEAMRLRKEKEKLEKYFRGVKNMHSL----PSALFVVDPRKEKIAVAEARK 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
IP V IVD+NC+P+ I Y +PGNDD AI+ A+++G++
Sbjct: 179 KGIPIVAIVDTNCDPDEIDYVIPGNDDAIRAIRLITSKIADAVIEGREG 227
>gi|420182925|ref|ZP_14689058.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM049]
gi|394249388|gb|EJD94601.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM049]
Length = 262
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 104/225 (46%), Gaps = 39/225 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +MK YI+ R G I DL ++ + + +A NFV I+
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKQISE 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVIL-T 184
G VLFVG Q ++ A+ +F + W G+ TN + + + + R+ ++ +
Sbjct: 63 EGGKVLFVGTKKQAQESVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKMEE 122
Query: 185 NTLTTVL--------------------------------------EPNPAIGEAAKMCIP 206
+ L VL + AI EA K+ IP
Sbjct: 123 DGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLNIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
VGIVD+NC+P+ I Y +P NDD AI+ AIL+G++
Sbjct: 183 IVGIVDTNCDPDEIDYVIPANDDAIRAIKLLTGKMADAILEGQQG 227
>gi|386829366|ref|ZP_10116473.1| ribosomal protein S2 [Beggiatoa alba B18LD]
gi|386430250|gb|EIJ44078.1| ribosomal protein S2 [Beggiatoa alba B18LD]
Length = 253
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 99/224 (44%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+ + L +A NF+ +A R
Sbjct: 3 VSMRQMLEAGVHFGHQTRYWNPQMAPYIFGARNKIHIINLEHTVRLYNEATNFIGKLAAR 62
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG I++ A C R W GM TN + + ++ RL DL
Sbjct: 63 KGNILFVGTKRSAQEPIKEAALRCGMPYVNRRWLGGMLTNYKTVKSSIKRLKDLEAMISD 122
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L +L + + N AI EA K+ IP
Sbjct: 123 GTINHLTKKEALSINRQVEKLERSLGGIKDMNGLPDALFVIDVGYEKIAISEAMKLGIPV 182
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+G+VDSN +P I Y +PGNDD AI Y IL+ ++A
Sbjct: 183 IGVVDSNSSPLNIDYVIPGNDDAIRAIGLYANGIADVILESRQA 226
>gi|332298053|ref|YP_004439975.1| 30S ribosomal protein S2 [Treponema brennaborense DSM 12168]
gi|332181156|gb|AEE16844.1| ribosomal protein S2 [Treponema brennaborense DSM 12168]
Length = 288
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 97/224 (43%), Gaps = 47/224 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + ++ VH GH++ D RMK YI+ R G I DL ++ +++A V +
Sbjct: 3 VVTMKSLLESGVHFGHQVKRWDPRMKKYIFAERNGIHIIDLQKTIVSIKEAYEAVRKVTV 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKL--------------- 170
VLFVG Q I K A+ C + W GM TN +
Sbjct: 63 AGKSVLFVGTKKQAQQAIAKEAERCGMYYVNNRWLGGMLTNFSTIKKSLLRLKKLEKMEI 122
Query: 171 ---FRAVTR-------------------------LPDLVILTNTLTTVLEPNPAIGEAAK 202
F +T+ LP ++ + +T + A+ EA +
Sbjct: 123 DGTFENLTKKEIASIQKEKSKLEKNLGGIKEMKDLPGIIFIIDTHKEQI----AVAEARR 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAIL 246
M IP V +VD+NCNP I YP+PGNDD AI + QV A++
Sbjct: 179 MGIPIVAVVDTNCNPEGIDYPIPGNDDAIRAISLFTQVIANAVI 222
>gi|239826643|ref|YP_002949267.1| 30S ribosomal protein S2 [Geobacillus sp. WCH70]
gi|259495216|sp|C5D9B5.1|RS2_GEOSW RecName: Full=30S ribosomal protein S2
gi|239806936|gb|ACS24001.1| ribosomal protein S2 [Geobacillus sp. WCH70]
Length = 235
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 39/228 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +MK YI+ R G I DL ++ + + +A NFV +A
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKMEEAYNFVKELA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
G +LFVG Q +++ A+ C F + W G TN + + + RL ++ +
Sbjct: 62 ANGGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLKEIEKMA 121
Query: 185 NTLT------------------------------------TVLEPNP---AIGEAAKMCI 205
T V++P A+ EA K+ I
Sbjct: 122 EDGTFDVLPKKEVIRIKKEQERLEKFLGGIKEMKELPDALFVIDPRKERIAVAEARKLNI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P +GIVD+NC+P+ I Y +P NDD A++ A+L+ K+ ++
Sbjct: 182 PIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAKQGEE 229
>gi|215400711|ref|YP_002327472.1| ribosomal protein S2 [Vaucheria litorea]
gi|194441161|gb|ACF70889.1| ribosomal protein S2 [Vaucheria litorea]
Length = 236
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 102/226 (45%), Gaps = 47/226 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V++ ++ A VH GHK + +M PYIY + G I DL Q++ LL+ A NFV +
Sbjct: 4 VELSELLAAGVHFGHKAHHWNPKMSPYIYTEKDGVHIIDLIQTSVLLKQACNFVQTASQT 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
LFVG Q + +I K AQ C W GM TN
Sbjct: 64 GKSFLFVGTKRQAAPVIAKEAQRCGAHYVNYRWLGGMLTNWITFRTRIQRLKDLENQQQQ 123
Query: 167 ----------SEKLFRAVTRL-------------PDLVILTNTLTTVLEPNPAIGEAAKM 203
+ KL + + RL PD++++ + ++ AI EA +
Sbjct: 124 GEIDNLPKKEAAKLTKELERLRKYFTGVKTMTKEPDIIVIIDQKIEII----AIKEALAL 179
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
P + I+D+NCNP+L+T P+PGNDD +I+Y + +I G+
Sbjct: 180 NKPIISILDTNCNPDLVTLPIPGNDDAVQSIKYIIEKLAESISNGQ 225
>gi|336233248|ref|YP_004589994.1| 30S ribosomal protein S2 [Buchnera aphidicola (Cinara tujafilina)]
gi|335345189|gb|AEH39735.1| 30S ribosomal protein S2 [Buchnera aphidicola (Cinara tujafilina)]
Length = 238
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 39/218 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+KDM A VH GH+ + +MKP+I+G++ I +L+++ L + A+ + + ++G
Sbjct: 6 MKDMITAGVHFGHQTRFWNPKMKPFIFGIQNKVHIINLEKTVPLFQSAIKELQNTIKKNG 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI------ 182
+LFVG S LI+++A C++F + W GM TN + + +++ +L DL +
Sbjct: 66 KILFVGTKRAASSLIKESAILCKQFYVNKRWLGGMLTNWKTVRQSIKKLKDLELQSQDGT 125
Query: 183 ------------------LTNTLTTV---------------LEPNPAIGEAAKMCIPTVG 209
L N+L + L N AI EA + IP
Sbjct: 126 FEKLTKKEVLLRMRSLQKLENSLGGIKNMGGLPDAIFIIDTLYENIAIQEANNLGIPVFA 185
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILK 247
IVD+N +P+ I Y +PGNDD +I+ Y + +LK
Sbjct: 186 IVDTNSSPDGIDYIIPGNDDAIRSIKLYLNILTLELLK 223
>gi|424781402|ref|ZP_18208260.1| SSU ribosomal protein S2p (SAe) [Campylobacter showae CSUNSWCD]
gi|421960688|gb|EKU12290.1| SSU ribosomal protein S2p (SAe) [Campylobacter showae CSUNSWCD]
Length = 266
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 47/227 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G I DL ++ R N V A
Sbjct: 1 MVTMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYIIDLQKTIRYFRYTYNVVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+LFVG Q +++ A+ C W GM TN
Sbjct: 61 EGKTILFVGTKKQAGATLKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEAMEE 120
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + +PD++ + +T+ + A+ EA +
Sbjct: 121 DGSINLLTKKEALMLRRKKEKLLASLGGIRNLKTVPDMIFVIDTVKEKI----AVQEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+ IP V +D+NC+P++I +P+PGNDD ++Q +CQ AI++G+
Sbjct: 177 LKIPVVAPIDTNCDPDVIDFPIPGNDDAIRSVQLFCQEMAEAIIEGR 223
>gi|359433350|ref|ZP_09223684.1| small subunit ribosomal protein S2 [Pseudoalteromonas sp. BSi20652]
gi|357920040|dbj|GAA59933.1| small subunit ribosomal protein S2 [Pseudoalteromonas sp. BSi20652]
Length = 242
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 101/223 (45%), Gaps = 39/223 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+Q+ + +AL F+ A
Sbjct: 4 VSMRDMLQAGVHFGHQARYWNPKMKPFIFGTRNRVHIINLEQTVPMFNNALKFLTGAASN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG S +++ A +F W GM TN + + +++ RL DL
Sbjct: 64 KGKVLFVGTKRAASEAVKEAAIASDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQD 123
Query: 181 ----------VILTNTLTTVLE------------PNP-----------AIGEAAKMCIPT 207
++ N LE P+ AI EA + IP
Sbjct: 124 GTFEKLTKKETLMLNREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAIREANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
V IVD+N NP+ + + VPGNDD A+ Y AI +G++
Sbjct: 184 VAIVDTNSNPDGVDFIVPGNDDAIRAVSLYTSAVAAAITEGRE 226
>gi|154248359|ref|YP_001419317.1| 30S ribosomal protein S2 [Xanthobacter autotrophicus Py2]
gi|238686807|sp|A7INR6.1|RS2_XANP2 RecName: Full=30S ribosomal protein S2
gi|154162444|gb|ABS69660.1| ribosomal protein S2 [Xanthobacter autotrophicus Py2]
Length = 334
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 99/224 (44%), Gaps = 48/224 (21%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M PYI+GVR I DL Q+ L AL V+ + G
Sbjct: 8 MRQLLEAGVHFGHQSHRWNPKMAPYIFGVRNNIHIIDLSQTVPALHRALQAVSDTVAQGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR------------ 176
VLFVG Q + A+ ++ W GM TN + + ++ R
Sbjct: 68 RVLFVGTKRQAQEQVADAARRSAQYYVNSRWLGGMLTNWKTISNSIARLKKLEEMLSGPE 127
Query: 177 --------------------------------LPDLVILTNTLTTVLEPNPAIGEAAKMC 204
LPDL+ + +T + + A+ EA ++
Sbjct: 128 QGSGYTKKERLTLSREKDKLDKALGGIRDMGGLPDLLFVIDT----NKEDIAVKEAQRLG 183
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
IP I+D+NC+P+ I +PVPGNDD AIQ YC++ A + G
Sbjct: 184 IPVAAILDTNCDPDGIAFPVPGNDDAGRAIQLYCELVARAAIDG 227
>gi|255323536|ref|ZP_05364667.1| ribosomal protein S2 [Campylobacter showae RM3277]
gi|255299573|gb|EET78859.1| ribosomal protein S2 [Campylobacter showae RM3277]
Length = 266
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 47/227 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G I DL ++ R N V A
Sbjct: 1 MVTMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYIIDLQKTIRYFRYTYNVVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+LFVG Q +++ A+ C W GM TN
Sbjct: 61 EGKTILFVGTKKQAGATLKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEAMEE 120
Query: 167 ------------------SEKLF------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + +PD++ + +T+ + A+ EA +
Sbjct: 121 DGSINLLTKKEALMLRRKKEKLLASLGGIRNLKTVPDMIFVIDTVKEKI----AVQEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+ IP V +D+NC+P++I +P+PGNDD ++Q +CQ AI++G+
Sbjct: 177 LKIPVVAPIDTNCDPDVIDFPIPGNDDAIRSVQLFCQEMAEAIIEGR 223
>gi|118590011|ref|ZP_01547415.1| 30S ribosomal protein S2 [Stappia aggregata IAM 12614]
gi|118437508|gb|EAV44145.1| 30S ribosomal protein S2 [Stappia aggregata IAM 12614]
Length = 259
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 101/241 (41%), Gaps = 48/241 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM YI+GVR I DL Q+ LL AL V+ G
Sbjct: 1 MRQLLEAGVHFGHQKHRWNPRMGQYIFGVRNDVHIMDLSQTVPLLHQALKAVSDTVSGGG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VL VG Q + A++ ++ W GM TN + + +++ RL
Sbjct: 61 RVLIVGTKRQAQEAVASAARNSAQYYVNARWLGGMLTNWKTISQSIQRLRKLEETLSSDA 120
Query: 178 --------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCI 205
PDL+ + +T + AI EA ++ I
Sbjct: 121 ANALTKKERLFMDREREKLERNLGGIKDMGGIPDLIFVIDTNREAI----AIQEARRLGI 176
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL-LSEKQE 264
P I+DSN NP ITYPVPGNDD A+ YC + A + G Q + + E +E
Sbjct: 177 PVAAILDSNSNPEGITYPVPGNDDAGRALSLYCDLIARAAIDGISRAQGASGMDIGESEE 236
Query: 265 V 265
Sbjct: 237 A 237
>gi|332532246|ref|ZP_08408127.1| 30S ribosomal protein S2 [Pseudoalteromonas haloplanktis ANT/505]
gi|332038344|gb|EGI74789.1| 30S ribosomal protein S2 [Pseudoalteromonas haloplanktis ANT/505]
Length = 242
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+Q+ + DAL F++ A
Sbjct: 4 VSMRDMLQAGVHFGHQARYWNPKMKPFIFGTRNRVHIINLEQTVPMFNDALKFLSSAAAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG S ++ A + +F W GM TN + + +++ RL DL
Sbjct: 64 KGKVLFVGTKRAASDAVKAAALESDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQD 123
Query: 181 ----------VILTNTLTTVLE------------PNP-----------AIGEAAKMCIPT 207
++ N LE P+ AI EA + IP
Sbjct: 124 GTFEKLTKKETLMLNREMEKLEKSLGGIKNMGGLPDALFVIDADHEHIAIREANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
V IVD+N NP+ + Y VPGNDD A+ Y AI +G++
Sbjct: 184 VAIVDTNSNPDGVDYIVPGNDDAIRAVSLYTSAVAAAITEGRE 226
>gi|322514202|ref|ZP_08067264.1| 30S ribosomal protein S2 [Actinobacillus ureae ATCC 25976]
gi|322119895|gb|EFX91904.1| 30S ribosomal protein S2 [Actinobacillus ureae ATCC 25976]
Length = 238
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 104/224 (46%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM +A VH GH+ + +MKP+I+G R G + +L+++ L +AL + I+
Sbjct: 4 VSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAGLTRISSN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
+G +LFVG S ++ A DCQ+F W GM TN + + +++ RL DL T
Sbjct: 64 NGKILFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQTQD 123
Query: 186 ------------TLTTVLE---------------PNP-----------AIGEAAKMCIPT 207
T LE P+ AI EA + IP
Sbjct: 124 GTFDKITKKEALMRTRELEKLELSLGGIKDMAGLPDAIFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
IVD+N P+ + Y +PGNDD AIQ Y A+ +G+ +
Sbjct: 184 FAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDAASAAVKEGRGS 227
>gi|52308040|gb|AAU38540.1| RpsB protein [Mannheimia succiniciproducens MBEL55E]
Length = 256
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 109/235 (46%), Gaps = 39/235 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+IYG R G I +L+++ + AL + IA
Sbjct: 18 VSMRDMLQAGVHFGHQTRYWNPKMKPFIYGPRNGVHIINLEKTVPMFNGALAELTRIASN 77
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
+G +LFVG + ++ A DCQ++ W GM TN + + +++ RL DL
Sbjct: 78 NGKILFVGTKRAATEAVQAAALDCQQYYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 137
Query: 183 -----LTNTLTTV-------LE------------PNP-----------AIGEAAKMCIPT 207
LT V LE P+ AI EA + IP
Sbjct: 138 GTFDKLTKKEALVRTREMEKLELSLGGIKDMAGLPDAIFVIGADYEHIAIKEANNLGIPV 197
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+VD+N NP+ I + +PGNDD AIQ Y A+ +G+ + T + +E+
Sbjct: 198 FAVVDTNSNPDGIDFVIPGNDDATRAIQLYVTAAAAAVKEGRSQQTATEEKFAEE 252
>gi|443322598|ref|ZP_21051617.1| ribosomal protein S2 [Gloeocapsa sp. PCC 73106]
gi|442787647|gb|ELR97361.1| ribosomal protein S2 [Gloeocapsa sp. PCC 73106]
Length = 260
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 43/225 (19%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V + ++ ++ VH GH+ +M+PYIY R G I DL Q+A+L+ +A +++ A
Sbjct: 2 SVVSLAELLESGVHFGHQTRRWSPKMRPYIYTARNGVHIIDLVQTAQLIEEAYSYLREAA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
VLF+G Q + +I + A+ C+ + + W GM TN E + + RL +L L
Sbjct: 62 ADGKKVLFIGTKRQAAGIIAQEAKRCKGYYVNQRWLGGMLTNWETIKNRIERLKELEQLN 121
Query: 185 NTLTTVLEPNP-----------------------------------------AIGEAAKM 203
+ T L+ P AI E K+
Sbjct: 122 D--TGALDKRPKKEASSLRRELEKLEKYLGGLKLMRRVPDVVVIVDIRREHNAILECQKL 179
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
IP V ++D+NC+PNL+ P+P NDD +I+ AI +G
Sbjct: 180 GIPVVALIDTNCDPNLVDIPIPANDDAIRSIKLIVGRLADAINEG 224
>gi|329889356|ref|ZP_08267699.1| ribosomal protein S2 [Brevundimonas diminuta ATCC 11568]
gi|328844657|gb|EGF94221.1| ribosomal protein S2 [Brevundimonas diminuta ATCC 11568]
Length = 280
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 97/220 (44%), Gaps = 46/220 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A H GH+ + +M YI+G R I DL Q+ LL AL V +A + G
Sbjct: 8 MRTLLEAGAHFGHQTHRWNPKMDRYIFGSRSNIHIIDLSQTMPLLHQALVAVRDVAAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q + + + A C ++ W G TN + ++ RL
Sbjct: 68 RVLFVGTKRQAADPVAQAATRCAQYYMNNRWLGGTLTNWRTVSNSIQRLRELEGIVEGGG 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PD++ + +T + AI EA K+ IP
Sbjct: 128 EGRNKKELLTLQREKDRLELSLGGIKDMGSVPDIMFVIDTNKEAI----AIQEARKLNIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAIL 246
+ I+D+N +P+ ITYPVPGNDD AIQ YC + A+L
Sbjct: 184 IIAILDTNSDPDGITYPVPGNDDAARAIQTYCDLIADAVL 223
>gi|262198482|ref|YP_003269691.1| 30S ribosomal protein S2 [Haliangium ochraceum DSM 14365]
gi|262081829|gb|ACY17798.1| ribosomal protein S2 [Haliangium ochraceum DSM 14365]
Length = 291
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 39/225 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
N + ++ + +A VH GH G + +M+PYI+G R G I DL Q+ L R A + +
Sbjct: 13 NPISLRALLEAGVHFGHNTGRWNPKMRPYIFGARNGIHIVDLQQTVTLFRQAFQAIIDVC 72
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
R VLFVG Q + +I A +F T W G TN + + +++ RL L L
Sbjct: 73 ARGEKVLFVGTKKQAADVIRDEAARADQFHVTDRWLGGTLTNFKTVKQSLDRLARLEKLE 132
Query: 185 NTLTT------------------------------------VLEPNP---AIGEAAKMCI 205
T V++P A+ EA K+ I
Sbjct: 133 EDGTLYQLSKKEQIFIRREQDKLMKSLGGIKSMTKLPGMMFVIDPGKEHIAVAEARKLEI 192
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
P V I D+NC+P+++ + +PGNDD AI+ + A + G +
Sbjct: 193 PVVAITDTNCDPDVVDFVIPGNDDAIRAIRLFASRIADAAVIGSR 237
>gi|357008015|ref|ZP_09073014.1| RpsB [Paenibacillus elgii B69]
Length = 232
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 39/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M YI+ R G I DL ++ + + +A NFV +A
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVEEAYNFVKSVAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
+G +LFVG Q +++ A+ C + + W G TN + + + + RL +L
Sbjct: 63 ENGTILFVGTKKQAQDSVKEEAERCGMYYINQRWLGGTLTNFQTIQKRINRLHELEKWEQ 122
Query: 181 ------------VILTN-------------------TLTTVLEPNP---AIGEAAKMCIP 206
+IL + V++P A+ EA K+ IP
Sbjct: 123 DGTFEVLPKKEVIILRKEKDRLEKFLGGISHMKGLPSALFVIDPRKERIAVAEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
VGIVD+NC+P+ I Y +PGNDD A++ A+++ ++ ++
Sbjct: 183 IVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTAKIADAVIEARQGEE 229
>gi|149196189|ref|ZP_01873244.1| ribosomal protein S2 [Lentisphaera araneosa HTCC2155]
gi|149140450|gb|EDM28848.1| ribosomal protein S2 [Lentisphaera araneosa HTCC2155]
Length = 345
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+K+ D+ +A VH GH+ + +MKPYIYG R G IFDL ++ L +A F+
Sbjct: 3 IKITDLLEAGVHFGHQTRRWNPKMKPYIYGSRNGIHIFDLSKTMVALNNACKFLYSTVAD 62
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLP-------- 178
G VLF+G Q+ ++E+ A+ + W G TN + ++V +L
Sbjct: 63 GGDVLFIGTKRQSQEIVEEAAKASNMHYISYRWLGGTLTNLTTIRKSVAKLKKYTKMEED 122
Query: 179 ----------------DLVILTNTLTTVLE---------------PNPAIGEAAKMCIPT 207
+ L N+L+ +++ + AI EA + IP
Sbjct: 123 GTLDAMKKKAASQIRREKTKLENSLSGIVDLQKPPAVVVIVDINKEHIAIKEAQSLGIPV 182
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
V I+DSN NP+ + Y +PGNDD ++Q A++ GK
Sbjct: 183 VAILDSNSNPDTVAYGIPGNDDAVRSVQVIFDQLSAAVVAGK 224
>gi|304404279|ref|ZP_07385941.1| ribosomal protein S2 [Paenibacillus curdlanolyticus YK9]
gi|304347257|gb|EFM13089.1| ribosomal protein S2 [Paenibacillus curdlanolyticus YK9]
Length = 232
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 39/229 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M YI+ R G I DL ++ + + +A NFV +A
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVDEAYNFVKSVAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
G VLFVG Q +++ A C F + W G TN + + + + RL L
Sbjct: 63 EGGTVLFVGTKKQAQDSVKEEAARCGNFYINQRWLGGTLTNFQTIQKRIDRLKQLEKWEE 122
Query: 181 ------------VILTN-------------------TLTTVLEPNP---AIGEAAKMCIP 206
+IL + +++P A+ EA K+ IP
Sbjct: 123 DGTFNVLPKKEVIILRKEKDRLEKFLGGIKGMKGLPSALFIIDPRKERIAVAEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
VGIVD+NC+P+ I Y +PGNDD A++ AI++ + +Q T
Sbjct: 183 IVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTSKMADAIVEANQGEQTT 231
>gi|408410955|ref|ZP_11182146.1| 30S ribosomal protein S2 [Lactobacillus sp. 66c]
gi|407874876|emb|CCK83952.1| 30S ribosomal protein S2 [Lactobacillus sp. 66c]
Length = 253
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + +A VH GH+ D +MKPYI+ R G I DL ++ ++L DA N+V +A
Sbjct: 2 SVVSMKQLLEAGVHFGHQTRRWDPKMKPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAVA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
DG+ LFVG Q I + A ++ + W G TN + V RL DL
Sbjct: 62 QDDGVFLFVGTKKQAQEAIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKDLKKMA 121
Query: 181 -------------VILTNTLTT-------------------VLEPNP---AIGEAAKMCI 205
+LT + V++P A+ EA K+ I
Sbjct: 122 EDGTFDVLPKKEVALLTKEMDKLQKFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
P V +VD+N +P I +P NDD AI+ AI++GK+
Sbjct: 182 PVVAMVDTNTDPTPIDVIIPSNDDAIRAIRLIAGAMADAIIEGKQG 227
>gi|359452323|ref|ZP_09241673.1| small subunit ribosomal protein S2 [Pseudoalteromonas sp. BSi20495]
gi|414070556|ref|ZP_11406539.1| small subunit ribosomal protein S2 [Pseudoalteromonas sp. Bsw20308]
gi|358050574|dbj|GAA77922.1| small subunit ribosomal protein S2 [Pseudoalteromonas sp. BSi20495]
gi|410807010|gb|EKS12993.1| small subunit ribosomal protein S2 [Pseudoalteromonas sp. Bsw20308]
Length = 242
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+Q+ + +AL F+ A
Sbjct: 4 VSMRDMLQAGVHFGHQARYWNPKMKPFIFGTRNRVHIINLEQTVPMFNNALKFLTGAASN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G VLFVG S +++ A ++ W GM TN + + +++ RL DL +
Sbjct: 64 KGKVLFVGTKRAASEAVKEAAIASDQYYVNHRWLGGMLTNWKTVRQSIKRLKDLEVQSQD 123
Query: 183 -----LTNTLTTVLE-------------------PNP-----------AIGEAAKMCIPT 207
LT T +L P+ AI EA + IP
Sbjct: 124 GTFEKLTKKETLMLNREMDKLEKSLGGIKNMGGLPDALFVIDADHEHIAIREANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
V IVD+N NP+ + + VPGNDD A+ Y AI +G++
Sbjct: 184 VAIVDTNSNPDGVDFIVPGNDDAIRAVSLYTSAVAAAITEGRE 226
>gi|292492488|ref|YP_003527927.1| 30S ribosomal protein S2 [Nitrosococcus halophilus Nc4]
gi|291581083|gb|ADE15540.1| ribosomal protein S2 [Nitrosococcus halophilus Nc4]
Length = 269
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 102/220 (46%), Gaps = 39/220 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+++ L +A NF+ +A
Sbjct: 4 VTMRQMLEAGVHFGHQARYWNPKMAPYIFGKRNNIHIINLEETLPLYNEATNFLGRLAAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G VLFVG I + A+ C R W GM TN + + R++ RL DL
Sbjct: 64 KGTVLFVGTKRAAQEAIHEEAERCGMPYVNRRWLGGMLTNFQTVRRSIKRLHDLEAMIQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + P+ A+ EAAK+ IP
Sbjct: 124 GSLERLKKREALTVRRERDKLENSLGGIKNMTHLPDALFIIDVEHERIAVDEAAKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILK 247
V +VD+N +P + Y +PGNDD+ A++ Y + AI++
Sbjct: 184 VAVVDTNSSPKKVDYIIPGNDDSIRALRLYARGIADAIVE 223
>gi|220915416|ref|YP_002490720.1| 30S ribosomal protein S2 [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953270|gb|ACL63654.1| ribosomal protein S2 [Anaeromyxobacter dehalogenans 2CP-1]
Length = 343
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 47/226 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K + +A VH GH+ + +MKP+I+G R G I DL ++ L R+AL FV+ +
Sbjct: 41 ITMKALLEAGVHFGHQTKRWNPKMKPFIFGARNGIYIIDLQKTVGLARNALRFVSDSVAK 100
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
G VLFVG Q I + A +F T W G TN
Sbjct: 101 GGSVLFVGTKKQAQDAIREEASRSGQFFVTNRWLGGTLTNFKTVKQGIDRLKTIEKMAAD 160
Query: 167 -----------------SEKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKM 203
EKL + ++RLP + + +T + + A+ EA ++
Sbjct: 161 GTYERLPKKEVAQLEREREKLEKNLGGIKELSRLPSALFVIDT----KKEHIAVHEANRL 216
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IP V +VD+NC+P I Y +PGNDD +I+ + A ++GK
Sbjct: 217 GIPVVAVVDTNCDPEGIDYVIPGNDDAIRSIRLFTGKVAEACIEGK 262
>gi|359300147|ref|ZP_09185986.1| 30S ribosomal protein S2 [Haemophilus [parainfluenzae] CCUG 13788]
gi|402305371|ref|ZP_10824430.1| ribosomal protein S2 [Haemophilus sputorum HK 2154]
gi|400376484|gb|EJP29371.1| ribosomal protein S2 [Haemophilus sputorum HK 2154]
Length = 236
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM +A VH GH+ + +MKP+I+G R G + +L+++ L +AL + I+
Sbjct: 4 VSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRISSN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
+G VLFVG S ++ A +CQ+F W GM TN + + +++ RL DL T
Sbjct: 64 NGKVLFVGTKRAASEAVKAAAVECQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQTQD 123
Query: 186 -----------------------TLTTVLEPNP---------------AIGEAAKMCIPT 207
+L + + N AI EA + IP
Sbjct: 124 GTFDKITKKEALMRTRELEKLELSLGGIKDMNGLPDAIFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N P+ + Y +PGNDD AIQ Y AI +GK
Sbjct: 184 FAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDSAVAAIKEGK 225
>gi|307245427|ref|ZP_07527515.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|307254381|ref|ZP_07536219.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|307258840|ref|ZP_07540572.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306853768|gb|EFM85985.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|306862680|gb|EFM94636.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|306867191|gb|EFM99047.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
Length = 238
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 104/224 (46%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM +A VH GH+ + +MKP+I+G R G + +L+++ L +AL + I+
Sbjct: 4 VSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRISSN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
+G +LFVG S ++ A DCQ+F W GM TN + + +++ RL DL T
Sbjct: 64 NGKILFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQTQD 123
Query: 186 ------------TLTTVLE---------------PNP-----------AIGEAAKMCIPT 207
T LE P+ AI EA + IP
Sbjct: 124 GTFDKITKKEALMRTRELEKLELSLGGIKDMAGLPDAIFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
IVD+N P+ + Y +PGNDD AIQ Y A+ +G+ +
Sbjct: 184 FAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDAASAAVKEGRGS 227
>gi|297588381|ref|ZP_06947024.1| 30S ribosomal protein S2 [Finegoldia magna ATCC 53516]
gi|297573754|gb|EFH92475.1| 30S ribosomal protein S2 [Finegoldia magna ATCC 53516]
Length = 270
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 39/238 (16%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + +A VH GH+ + +M +I+ R G I DL ++ + + DA N+V I
Sbjct: 2 SVVSMKSLLEAGVHFGHQTRRWNPKMSKFIFTERNGIYIIDLQKTVKQIDDAYNYVRDIV 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
G VLFVG Q IE A+ C + ++ W GM TN + + + RL L +
Sbjct: 62 ADGGEVLFVGTKKQAQEAIETEAKRCGQHYVSQRWLGGMLTNYKTIKTRINRLHQLYEME 121
Query: 185 NTLTTVLEPNP---------------------------------------AIGEAAKMCI 205
T L P A+ EA + I
Sbjct: 122 EDGTFDLLPKKEVSQLEREREKLEKNLGGIRKMTKMPSVLFVVDPKKEYIAVHEAKILGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQ 263
P VGIVD+NC+P+ + +PGNDD A++ A+++ + ++D+ ++ SE +
Sbjct: 182 PVVGIVDTNCDPDELDIAIPGNDDAIRAVKLLTSTIADAVIEANQGREDSEEVYSETE 239
>gi|296445471|ref|ZP_06887428.1| ribosomal protein S2 [Methylosinus trichosporium OB3b]
gi|296257037|gb|EFH04107.1| ribosomal protein S2 [Methylosinus trichosporium OB3b]
Length = 351
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 96/222 (43%), Gaps = 46/222 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + ++ H GH+ + +M P+I+G R I DL Q+ LL AL V+ R G
Sbjct: 8 MRGLLESGAHFGHQSHRWNPKMAPFIFGARNNIHIIDLAQTVPLLHQALKVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q I A+ ++ W G TN + + ++ RL
Sbjct: 68 RVLFVGTKRQAQDQIADAARRSAQYYINSRWLGGTLTNWKTISGSIQRLRKLDEQLSVGS 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T L AI EA ++ IP
Sbjct: 128 GGVTKKERLLLTREKEKLEKALGGIKDMGGTPDLLFVIDTNKEQL----AIKEAGRLKIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
V I+D+NC+P+ ITYP+PGNDD AI YC + A + G
Sbjct: 184 VVAILDTNCDPDGITYPIPGNDDAGRAIALYCDLIARAAIDG 225
>gi|217977856|ref|YP_002362003.1| 30S ribosomal protein S2 [Methylocella silvestris BL2]
gi|254764485|sp|B8EKA1.1|RS2_METSB RecName: Full=30S ribosomal protein S2
gi|217503232|gb|ACK50641.1| ribosomal protein S2 [Methylocella silvestris BL2]
Length = 349
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 96/222 (43%), Gaps = 46/222 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + DA H GH+ + +M+P+I+G R I DL Q+ LL AL V+ R G
Sbjct: 8 MRSLLDAGAHFGHQSHRWNPKMEPFIFGTRNNIHIIDLAQTVPLLHQALKAVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q I A ++ W GM TN + + ++ RL
Sbjct: 68 RVLFVGTKRQAQDAIADAAHRSAQYYINSRWLGGMLTNWKTISASIQRLRKVEETLQGGG 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + +T L AI EA ++ IP
Sbjct: 128 SGLTKKERLMMSRERDKLEKALGGIKEMGGIPDLIFVIDTNKEQL----AIKEAERLHIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
I+D+NCNP+ IT+P+PGNDD AI YC + A L G
Sbjct: 184 VAAILDTNCNPDGITFPIPGNDDAGRAIALYCDLIARAALDG 225
>gi|339021310|ref|ZP_08645414.1| SSU ribosomal protein S2P [Acetobacter tropicalis NBRC 101654]
gi|338751584|dbj|GAA08718.1| SSU ribosomal protein S2P [Acetobacter tropicalis NBRC 101654]
Length = 263
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 102/226 (45%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + RM+PY++GVR I DL Q+ LL AL + + G
Sbjct: 6 LRQLLEAGVHFGHHTRRWNPRMEPYLFGVRNQVHIIDLQQTVGLLDRALQAIRNTVAGGG 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR------------ 176
VLFVG + I + A+ C ++ W GM TN + + ++ R
Sbjct: 66 RVLFVGTKRAAAEPIAEAAKRCGQYYVNHRWLGGMLTNWKTITGSIKRLRQIEEMLDGGT 125
Query: 177 ------------------------------LPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
LPD++ + +T L A+ EA K+ IP
Sbjct: 126 AGLTKKEILDMTRDRDKLERSLGGIKEMGGLPDILFIIDTNKEKL----AVEEANKLGIP 181
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V I+DSN +P +T+P+PGNDD AI YC + +A+L G A+
Sbjct: 182 VVAILDSNSDPKGVTFPIPGNDDAIRAISLYCDLVSSAVLDGISAE 227
>gi|154148854|ref|YP_001406404.1| 30S ribosomal protein S2 [Campylobacter hominis ATCC BAA-381]
gi|166225255|sp|A7I1L3.1|RS2_CAMHC RecName: Full=30S ribosomal protein S2
gi|153804863|gb|ABS51870.1| ribosomal protein S2 [Campylobacter hominis ATCC BAA-381]
Length = 267
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 48/243 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G I DL ++ R N V A
Sbjct: 1 MVTMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYIIDLQKTIRYFRYTYNIVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKL--------------- 170
+LFVG Q I++ A+ C+ W GM TN + +
Sbjct: 61 EGKTILFVGTKKQAGAAIKEFAEKCEMPYVNHRWLGGMLTNFDTIKQSIRKLEVIEQMET 120
Query: 171 ----------------------------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
R + LPD+V + + + + A+ EA +
Sbjct: 121 DGSMDLLTKKEAGMLKSKKAKLELYLGGIRNMKNLPDMVFVIDCVKEKI----AVKEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK-QDTLKLLSE 261
+ +P + +D+NC+P+++ +P+PGNDD +IQ +CQ AI +GK + QD+ + +
Sbjct: 177 LGMPVIAPLDTNCDPDVVDFPIPGNDDAIRSIQLFCQEMSEAINEGKALRDQDSEEEIQN 236
Query: 262 KQE 264
K++
Sbjct: 237 KEQ 239
>gi|212710397|ref|ZP_03318525.1| hypothetical protein PROVALCAL_01457 [Providencia alcalifaciens DSM
30120]
gi|422020032|ref|ZP_16366574.1| 30S ribosomal protein S2 [Providencia alcalifaciens Dmel2]
gi|212686979|gb|EEB46507.1| hypothetical protein PROVALCAL_01457 [Providencia alcalifaciens DSM
30120]
gi|414102656|gb|EKT64248.1| 30S ribosomal protein S2 [Providencia alcalifaciens Dmel2]
Length = 241
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL + IA R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A C ++ W GM TN + + +++ RL DL +
Sbjct: 64 KGKILFVGTKRAASEAVQEAANSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEVQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ I + +PGNDD AI+ Y + +G+
Sbjct: 184 FAIVDTNSDPDGIDFVIPGNDDAIRAIKLYLGAVANTVREGR 225
>gi|417358984|ref|YP_002932287.2| 30S ribosomal protein S2, putative [Edwardsiella ictaluri 93-146]
gi|409033152|gb|ACR68052.2| 30S ribosomal protein S2, putative [Edwardsiella ictaluri 93-146]
Length = 241
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + DAL ++ IA R
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELSKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S ++ A C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVKDAALKCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A+ Y A+ +G+
Sbjct: 184 FSIVDTNSDPDGVDFVIPGNDDAIRAVTLYLSAVAEAVREGR 225
>gi|91792911|ref|YP_562562.1| 30S ribosomal protein S2 [Shewanella denitrificans OS217]
gi|123166215|sp|Q12NY7.1|RS2_SHEDO RecName: Full=30S ribosomal protein S2
gi|91714913|gb|ABE54839.1| SSU ribosomal protein S2P [Shewanella denitrificans OS217]
Length = 242
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 45/233 (19%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R G I +L+ + + +AL F++++A +
Sbjct: 4 VTMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG I+++A C ++ W GM TN + + +++ RL +L
Sbjct: 64 KGKVLFVGTKRAAGEAIKESALSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQSVD 123
Query: 181 -----------VILTNTLTTVLEP----------------------NPAIGEAAKMCIPT 207
++ T L + + + AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK------KAKQD 254
V +VD+N P+ + Y VPGNDD AI+ Y A G+ +A+QD
Sbjct: 184 VAVVDTNSAPDGVNYIVPGNDDAMRAIRLYTSSVAAAANSGRGQDLAVQAEQD 236
>gi|379007631|ref|YP_005257082.1| 30S ribosomal protein S2 [Sulfobacillus acidophilus DSM 10332]
gi|361053893|gb|AEW05410.1| ribosomal protein S2 [Sulfobacillus acidophilus DSM 10332]
Length = 252
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 39/227 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + +A VH GH+ + +MKPYI+ R G I DL ++ + +A NFV I
Sbjct: 2 SVVSMKQLLEAGVHFGHQTRRWNPKMKPYIFTERNGIYIIDLQKTVRKVDEAYNFVRQIG 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
G +LFVG Q + + A+ ++ + W GM TN + + R V RL +L
Sbjct: 62 MSGGRMLFVGTKKQAQEAVMEEARRSGDYYVNQRWLGGMLTNFDTIKRRVKRLAELKEQE 121
Query: 181 --------------------VILTNTLTT------------VLEPNP---AIGEAAKMCI 205
L L V++P A+ EA K+ I
Sbjct: 122 ASGQWERLPKKEVSALSRQKAKLEKYLGGIEGMRELPAALFVVDPRKEHIAVTEARKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
P V IVD+NC+P+ + Y +PGNDD A++ A+++G++ +
Sbjct: 182 PIVAIVDTNCDPDEVDYVIPGNDDAIRAVRLLTGKIADALIEGRQGE 228
>gi|407692439|ref|YP_006817228.1| 30S ribosomal protein S2 [Actinobacillus suis H91-0380]
gi|407388496|gb|AFU18989.1| 30S ribosomal protein S2 [Actinobacillus suis H91-0380]
Length = 238
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM +A VH GH+ + +MKP+I+G R G + +L+++ L +AL + I+
Sbjct: 4 VSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRISSN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
+G +LFVG S ++ A DCQ+F W GM TN + + +++ RL DL T
Sbjct: 64 NGKILFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEAQTQD 123
Query: 186 ------------TLTTVLE---------------PNP-----------AIGEAAKMCIPT 207
T LE P+ AI EA + IP
Sbjct: 124 GTFDKITKKEALMRTRELEKLELSLGGIKDMAGLPDAIFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N P+ + Y +PGNDD AIQ Y A+ +G+
Sbjct: 184 FAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDAASAAVKEGR 225
>gi|300023429|ref|YP_003756040.1| 30S ribosomal protein S2 [Hyphomicrobium denitrificans ATCC 51888]
gi|299525250|gb|ADJ23719.1| ribosomal protein S2 [Hyphomicrobium denitrificans ATCC 51888]
Length = 329
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 101/228 (44%), Gaps = 45/228 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M P+IYG R I DL Q+ +L AL V+ G
Sbjct: 8 MRQLLEAGVHFGHQAHRWNPKMAPFIYGSRNKIHILDLTQTVPMLHQALLKVSDTVAGGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFV Q S I + A+ ++ W G TN + + +++ RL
Sbjct: 68 RVLFVATKRQASDGIAEAAKRSAQYFINHRWLGGTLTNWKTVSQSIRRLRQLDDILADPQ 127
Query: 178 ------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIPT 207
PDL+++ +T + AI EA K+ IP
Sbjct: 128 GRTKKEVLNLTRERDKLNQSLGGIKDMGGTPDLLVVIDTNKESI----AIQEARKLNIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V IVD+NC+P+ I YPVPGNDD AI YC + A L G + Q +
Sbjct: 184 VAIVDTNCDPDGIDYPVPGNDDAGRAITLYCDLMARAALDGIERAQGS 231
>gi|197120704|ref|YP_002132655.1| 30S ribosomal protein S2 [Anaeromyxobacter sp. K]
gi|209573728|sp|Q2IML9.2|RS2_ANADE RecName: Full=30S ribosomal protein S2
gi|238689904|sp|B4UMB8.1|RS2_ANASK RecName: Full=30S ribosomal protein S2
gi|196170553|gb|ACG71526.1| ribosomal protein S2 [Anaeromyxobacter sp. K]
Length = 314
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 47/226 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K + +A VH GH+ + +MKP+I+G R G I DL ++ L R+AL FV+ +
Sbjct: 12 ITMKALLEAGVHFGHQTKRWNPKMKPFIFGARNGIYIIDLQKTVGLARNALRFVSDSVAK 71
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
G VLFVG Q I + A +F T W G TN
Sbjct: 72 GGSVLFVGTKKQAQDAIREEASRSGQFFVTNRWLGGTLTNFKTVKQGIDRLKTIEKMAAD 131
Query: 167 -----------------SEKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKM 203
EKL + ++RLP + + +T + + A+ EA ++
Sbjct: 132 GTYERLPKKEVAQLEREREKLEKNLGGIKELSRLPSALFVIDT----KKEHIAVHEANRL 187
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IP V +VD+NC+P I Y +PGNDD +I+ + A ++GK
Sbjct: 188 GIPVVAVVDTNCDPEGIDYVIPGNDDAIRSIRLFTGKVAEACIEGK 233
>gi|452125154|ref|ZP_21937738.1| 30S ribosomal protein S2 [Bordetella holmesii F627]
gi|452128563|ref|ZP_21941140.1| 30S ribosomal protein S2 [Bordetella holmesii H558]
gi|451924384|gb|EMD74525.1| 30S ribosomal protein S2 [Bordetella holmesii F627]
gi|451925610|gb|EMD75748.1| 30S ribosomal protein S2 [Bordetella holmesii H558]
Length = 249
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 112/237 (47%), Gaps = 42/237 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+++M +A VH GH+ + +M PYI+G R I +L+Q+ ++A FV IA R G
Sbjct: 4 MREMLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVGKFQEATKFVKQIAARGG 63
Query: 129 IVLFVGQSAQNSLLIEKTAQDC-QEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI----- 182
VLFVG L+ AQ C + R W GM TN + + ++ RL D+ +
Sbjct: 64 NVLFVGTKRAARELVAAEAQRCGMPYVDAR-WLGGMLTNFKTVKSSIKRLKDMEVMVADG 122
Query: 183 -------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPTV 208
L ++ + + N A+ EA + IP V
Sbjct: 123 SVERLTKKEGLLFQRELDKLNKSIGGIKDMNGLPDALFVIDVGYHKIAVAEARTLGIPVV 182
Query: 209 GIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTL-KLLSEKQE 264
+VD+N +P+ + Y +PGNDD+ AI+ Y + A+L+G++ + L + ++E QE
Sbjct: 183 AVVDTNHSPDGVDYIIPGNDDSARAIELYAKGMADAVLEGREQNLNGLVEEIAEGQE 239
>gi|32034392|ref|ZP_00134582.1| COG0052: Ribosomal protein S2 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|165975980|ref|YP_001651573.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|190149879|ref|YP_001968404.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|303251567|ref|ZP_07337741.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|303252197|ref|ZP_07338365.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|307249774|ref|ZP_07531752.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|307252120|ref|ZP_07534019.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307256588|ref|ZP_07538369.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|307263203|ref|ZP_07544823.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|238687535|sp|B0BUC4.1|RS2_ACTPJ RecName: Full=30S ribosomal protein S2
gi|238692330|sp|B3GXB0.1|RS2_ACTP7 RecName: Full=30S ribosomal protein S2
gi|165876081|gb|ABY69129.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|189915010|gb|ACE61262.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|302648980|gb|EFL79168.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|302649565|gb|EFL79747.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306858189|gb|EFM90267.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|306860420|gb|EFM92434.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306864998|gb|EFM96900.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306871420|gb|EFN03144.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 238
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM +A VH GH+ + +MKP+I+G R G + +L+++ L +AL + I+
Sbjct: 4 VSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRISSN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
+G +LFVG S ++ A DCQ+F W GM TN + + +++ RL DL T
Sbjct: 64 NGKILFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQTQD 123
Query: 186 ------------TLTTVLE---------------PNP-----------AIGEAAKMCIPT 207
T LE P+ AI EA + IP
Sbjct: 124 GTFDKITKKEALMRTRELEKLELSLGGIKDMAGLPDAIFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N P+ + Y +PGNDD AIQ Y A+ +G+
Sbjct: 184 FAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDAAAAAVKEGR 225
>gi|383758592|ref|YP_005437577.1| 30S ribosomal protein S2 [Rubrivivax gelatinosus IL144]
gi|381379261|dbj|BAL96078.1| 30S ribosomal protein S2 RpsB [Rubrivivax gelatinosus IL144]
Length = 247
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 38/221 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +++M +A VH GH+ + +M PYIYG R I +L+++ L DA+ FV ++ R
Sbjct: 3 VSMREMLEAGVHFGHQTRFWNPKMAPYIYGHRNKIHIINLEKTQPLFEDAMKFVRQLSAR 62
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPD------- 179
G +L +G Q ++ AQ C + W GM TN + + ++ +L D
Sbjct: 63 RGTILMIGTKRQAREVVAMEAQRCGMPYVDQRWLGGMLTNFKTVKGSLKKLKDMQATKEA 122
Query: 180 ----------------LVILTNTLTTVLEPNP---------------AIGEAAKMCIPTV 208
LV L + + + + A+ EA K+ IP +
Sbjct: 123 GMEQMIKKEALLFDRELVKLEKDIGGIQDMSALPDAMFVIDVGYHKIAVAEAKKLGIPVI 182
Query: 209 GIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
G+VD+N +P I Y +PGNDD+ A+ Y + A+L+GK
Sbjct: 183 GVVDTNHSPVGIDYVIPGNDDSAKAVALYARAVADAVLEGK 223
>gi|421493563|ref|ZP_15940919.1| RPSB [Morganella morganii subsp. morganii KT]
gi|400192313|gb|EJO25453.1| RPSB [Morganella morganii subsp. morganii KT]
Length = 234
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 39/220 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++DM A VH GH+ + +MKP+I+G R I +L+++ + DAL + IA R G
Sbjct: 1 MRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELNKIASRKG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI------ 182
+LFVG S +++ A C +F W GM TN + + +++ RL DL
Sbjct: 61 KILFVGTKRAASEAVQEAAISCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEAQSQDGT 120
Query: 183 ------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPTVG 209
L N+L + + P+ AI EA + IP
Sbjct: 121 FDKLTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPVFA 180
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD AI+ Y T++ +G+
Sbjct: 181 IVDTNSDPDGVDFIIPGNDDAIRAIKLYLGAVATSVREGR 220
>gi|407474026|ref|YP_006788426.1| 30S ribosomal protein S2 [Clostridium acidurici 9a]
gi|407050534|gb|AFS78579.1| 30S ribosomal protein S2 [Clostridium acidurici 9a]
Length = 232
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 39/228 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K++ +A VH GH+ + +M YI+ R G I DL ++ + DA N V I
Sbjct: 2 SVISMKNLLEAGVHFGHQTRRWNPKMAEYIFTERNGIYIIDLQKTVVKVEDAYNVVRDII 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
G +LFVG Q IE A+ + ++ W GM TN + + + + RL +L
Sbjct: 62 LDGGEILFVGTKKQAQESIESEAKRSEMHYVSQRWLGGMLTNFKTITKRIERLQELEEME 121
Query: 181 -------------VILTNT-------------------LTTVLEPNP---AIGEAAKMCI 205
+ L N + V++P A+ EA + I
Sbjct: 122 EKGIFEVLPKKEVIKLKNEAEKLEKFLGGIKNMKRIPDVLFVVDPRKEKIAVREAKILGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P VGIVD+NC+P+ + Y +PGNDD A++ + A+L+GK+ +Q
Sbjct: 182 PVVGIVDTNCDPDEVDYVIPGNDDAIRAVKLLTETIANAVLEGKQGQQ 229
>gi|94986821|ref|YP_594754.1| 30S ribosomal protein S2 [Lawsonia intracellularis PHE/MN1-00]
gi|442555652|ref|YP_007365477.1| 30S ribosomal protein S2 [Lawsonia intracellularis N343]
gi|122988787|sp|Q1MRE3.1|RS2_LAWIP RecName: Full=30S ribosomal protein S2
gi|94731070|emb|CAJ54433.1| ribosomal protein S2 [Lawsonia intracellularis PHE/MN1-00]
gi|441493099|gb|AGC49793.1| 30S ribosomal protein S2 [Lawsonia intracellularis N343]
Length = 291
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K M + VH GH+ + +M+PYI+G R G I DL Q+ +L R A + +
Sbjct: 4 VSMKQMLETGVHFGHQTRRWNPKMRPYIFGARNGIHIIDLQQTVKLYRAAHDKIVETVAA 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG Q I A ++ W G TN + +++ RL L
Sbjct: 64 GGSVLFVGTKRQAQEAIATEATRAGQYYVANRWMGGTLTNFSTIQKSIERLNRLETMFSD 123
Query: 181 ---------VILTNT---------------------LTTVLEP---NPAIGEAAKMCIPT 207
ILT L +++P N A+ E K+ IP
Sbjct: 124 GSVNRYQKKEILTLNREMDKLELTLGGIKNMERLPQLIFIIDPHRENIAVKEGRKLGIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
+ + D+NC+P+LI Y +PGNDD AI+ + A ++G+ ++DT
Sbjct: 184 MAVTDTNCDPDLIDYIIPGNDDAIRAIKLFVTAMADACIEGEALQKDT 231
>gi|349700099|ref|ZP_08901728.1| 30S ribosomal protein S2 [Gluconacetobacter europaeus LMG 18494]
Length = 261
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + RM PY++GVR I DL Q+ +L AL + G
Sbjct: 8 MRQLLEAGVHFGHHTRRWNPRMAPYLFGVRNQVHIIDLQQTVPMLDRALKAIRDTVAGGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG + + + A+ C ++ W GM TN
Sbjct: 68 RVLFVGTKRAAADQVAEAAKRCGQYYVNHRWLGGMLTNWKTITGSIKRLRGIDEMLENGT 127
Query: 167 --------------SEKLFRAVTR------LPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL R++ LPD++ + +T L A+ EA K+ IP
Sbjct: 128 QGLTKKEVLDITRDREKLERSLGGIKEMGGLPDILFVIDTNKEKL----AVEEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V ++DSN +P +TYP+PGNDD AI YC++ +A+L G A+
Sbjct: 184 VVAVLDSNSDPRGVTYPIPGNDDAIRAIALYCELVSSAVLDGISAE 229
>gi|307261022|ref|ZP_07542704.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306869324|gb|EFN01119.1| 30S ribosomal protein S2 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
Length = 238
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM +A VH GH+ + +MKP+I+G R G + +L+++ L +AL + I+
Sbjct: 4 VSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLEKTLPLFNEALAELTRISSN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
+G +LFVG S ++ A DCQ+F W GM TN + + +++ RL DL T
Sbjct: 64 NGKILFVGTKRAASEAVKAAAVDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQTQD 123
Query: 186 ------------TLTTVLE---------------PNP-----------AIGEAAKMCIPT 207
T LE P+ AI EA + IP
Sbjct: 124 GTFDKITKKEALMRTRELEKLELSLGGIKDMAGLPDAIFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N P+ + Y +PGNDD AIQ Y A+ +G+
Sbjct: 184 FAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDAAAAAVKEGR 225
>gi|189485405|ref|YP_001956346.1| 30S ribosomal protein S2 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|238058202|sp|B1H053.1|RS2_UNCTG RecName: Full=30S ribosomal protein S2
gi|170287364|dbj|BAG13885.1| 30S ribosomal protein S2 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 244
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 99/222 (44%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K + +A VH GH+ + +M +I+G+R I DL ++ + L+ V
Sbjct: 4 ITMKALLEAGVHFGHQTRRWNPKMAKFIFGMRNKIHIIDLQKTLKELKKNYKVVRDFTST 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
++FVG Q L I++ A C + + W G TN E L +++TR ++ + T
Sbjct: 64 GKDIIFVGTKKQARLPIKEEALRCGAYFVSERWLGGTLTNFETLKKSITRYKEIEDMKET 123
Query: 187 LTTVL---------------------------------------EPNPAIGEAAKMCIPT 207
L E AI EA K+ IP
Sbjct: 124 GVFKLLSKKEQSRIEKERIKLEKSLEGLKNMSSLPGLMFVVDSHEETTAILEARKLEIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
V + D+NCNP+L+ YP+PGNDD A++ +C V A+L+GK
Sbjct: 184 VAVCDTNCNPDLVDYPIPGNDDAIRAVKLFCTVIADAVLEGK 225
>gi|402817523|ref|ZP_10867111.1| 30S ribosomal protein S2 [Paenibacillus alvei DSM 29]
gi|402505045|gb|EJW15572.1| 30S ribosomal protein S2 [Paenibacillus alvei DSM 29]
Length = 232
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 39/229 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M YI+ R G I DL ++ + + +A NFV +
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVEEAYNFVKSVGE 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
+G +LFVG Q +++ A+ C + + W G TN E + + + RL L +
Sbjct: 63 ENGTILFVGTKKQAQDSVKEEAERCGMYYINQRWLGGTLTNFETIQKRIDRLKQLETMEE 122
Query: 186 TLT------------------------------------TVLEPNP---AIGEAAKMCIP 206
T V++P A+ EA K+ IP
Sbjct: 123 DGTFEVLPKKEVIILRKEKDRLEKFLGGIKNMKGLPSALFVIDPRKERIAVAEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
VGIVD+NC+P+ I Y +PGNDD A++ AI++ + ++ T
Sbjct: 183 IVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTSKMADAIVEAHQGEETT 231
>gi|416124344|ref|ZP_11595340.1| ribosomal protein S2 [Staphylococcus epidermidis FRI909]
gi|319401454|gb|EFV89664.1| ribosomal protein S2 [Staphylococcus epidermidis FRI909]
Length = 262
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 39/225 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +MK YI+ R G I DL ++ + + +A NFV I+
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKQISE 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVIL-T 184
G VLFVG Q ++ A+ +F + W G+ TN + + + + R+ ++ +
Sbjct: 63 EGGKVLFVGTKKQAQESVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKMEE 122
Query: 185 NTLTTVL--------------------------------------EPNPAIGEAAKMCIP 206
+ L VL + AI EA K+ IP
Sbjct: 123 DGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLNIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
VGIVD+NC+P+ I Y +P NDD A++ AIL+G++
Sbjct: 183 IVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEGQQG 227
>gi|259419260|ref|ZP_05743177.1| ribosomal protein S2 [Silicibacter sp. TrichCH4B]
gi|259345482|gb|EEW57336.1| ribosomal protein S2 [Silicibacter sp. TrichCH4B]
Length = 256
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 99/226 (43%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM P+IYG R G I DL Q+ +L AL + + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMGPFIYGARNGIHIMDLTQTVPMLDQALTAIRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q + I + A+ ++ W G TN + + +++ RL
Sbjct: 68 RVLFVGTKRQAAAPIAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSINRLKEIDERMAAGA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + L AI EA K+ IP
Sbjct: 128 EGLTKKERLGMERDQEKLQASLGGIRDMGGVPDLLFVIDVKKEAL----AIAEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V IVD+NC+P+ + Y +PGNDD AI YC + A L G A+
Sbjct: 184 VVAIVDTNCSPDGVDYIIPGNDDAARAISLYCDLVARAALDGMSAQ 229
>gi|289208671|ref|YP_003460737.1| 30S ribosomal protein S2 [Thioalkalivibrio sp. K90mix]
gi|288944302|gb|ADC72001.1| ribosomal protein S2 [Thioalkalivibrio sp. K90mix]
Length = 260
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 100/226 (44%), Gaps = 39/226 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+LV ++ M +A VH GH+ +M PYI+G R I +L++S + DALNF+ IA
Sbjct: 2 SLVTMRQMLEAGVHFGHQTRYWHPKMAPYIFGERNKIHIINLEKSLPMFNDALNFLGKIA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI-- 182
G ++FVG ++ + A+ C + W GM TN + +++ RL DL
Sbjct: 62 ADGGKIMFVGTKRSAREVVAEEARRCGMPFVSHRWLGGMLTNFSTVKQSIKRLKDLETMD 121
Query: 183 ----------------------LTNTLTTVLEPNP---------------AIGEAAKMCI 205
L +L + + N A+ EA K I
Sbjct: 122 ADGSFEVLNKREALTRRREKDKLERSLGGIKDMNRMPDAMFVIDVGYEKIAVAEAKKRGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
P V +VDSN +P + Y +PGNDD AIQ Y I++ K A
Sbjct: 182 PVVAVVDSNHSPEGVDYVIPGNDDAMRAIQLYVAAIADTIIEAKGA 227
>gi|420197146|ref|ZP_14702870.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM020]
gi|394265953|gb|EJE10599.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM020]
Length = 262
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 39/225 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +MK YI+ R G I DL ++ + + +A NFV I+
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKQISE 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVIL-T 184
G VLFVG Q ++ A+ +F + W G+ TN + + + + R+ ++ +
Sbjct: 63 EGGKVLFVGTKKQAQESVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIKKMEE 122
Query: 185 NTLTTVL--------------------------------------EPNPAIGEAAKMCIP 206
+ L VL + AI EA K+ IP
Sbjct: 123 DGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLNIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
VGIVD+NC+P+ I Y +P NDD A++ AIL+G++
Sbjct: 183 IVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEGQQG 227
>gi|326388630|ref|ZP_08210223.1| 30S ribosomal protein S2 [Novosphingobium nitrogenifigens DSM
19370]
gi|326206881|gb|EGD57705.1| 30S ribosomal protein S2 [Novosphingobium nitrogenifigens DSM
19370]
Length = 251
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 101/227 (44%), Gaps = 46/227 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++ + +A H GH+ + RMKPYI+GVR G I DL Q+ L AL+F++
Sbjct: 5 VVTMQQLIEAGAHFGHQTHRWNPRMKPYIFGVRNGIHILDLSQTVPLFARALDFISATVQ 64
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------SEKLFRA------ 173
G VLFVG Q I + A+ + W GM TN S K F+A
Sbjct: 65 AGGKVLFVGTKRQAQEPIAQAARAAGQHYVNHRWLGGMLTNWKTISGSIKRFKALEEQLS 124
Query: 174 -------------VTR-----------------LPDLVILTNTLTTVLEPNPAIGEAAKM 203
+TR +PD++ + + L AI EA +
Sbjct: 125 GDTAGLTKKEVLQLTRERDKLELSLGGIRDMGGIPDVMFVIDANKEEL----AIKEANVL 180
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
IP V I+DSN +P I +P+P NDD AI+ YC+ A +G +
Sbjct: 181 GIPVVAILDSNVSPEGIAFPIPANDDASRAIRLYCEAVAAAATRGGR 227
>gi|78356180|ref|YP_387629.1| 30S ribosomal protein S2 [Desulfovibrio alaskensis G20]
gi|123727753|sp|Q313G2.1|RS2_DESDG RecName: Full=30S ribosomal protein S2
gi|78218585|gb|ABB37934.1| ribosomal protein S2 [Desulfovibrio alaskensis G20]
Length = 260
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K M + VH GH+ + +M YI+G R G I DL Q+ +L R A + V R
Sbjct: 4 VTMKGMLETGVHFGHQTRRWNPKMGTYIFGARNGIHIIDLQQTVKLFRTAHDKVVDTVAR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
G V+F+G Q ++ A ++ T W G TN + + +++ RL L ++
Sbjct: 64 GGKVIFIGTKRQAQEAVQTEAGRAGQYYVTNRWMGGTLTNFQTIRKSIDRLKKLEVMFED 123
Query: 186 -----------------------------------TLTTVLEPNP---AIGEAAKMCIPT 207
L +++PN A+ E ++ IP
Sbjct: 124 GTVNRYQKKEVLRLRREMDKLNLVLGGIKDMENLPQLAFIIDPNREDIAVKECRRLGIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V + D+NC+P+LI Y +PGNDD AI+ + A L+G+ +++T
Sbjct: 184 VAVTDTNCDPDLIDYVIPGNDDAIRAIKLFVGHIADACLEGEAMRKET 231
>gi|384227670|ref|YP_005619415.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
gi|345538610|gb|AEO08587.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
Length = 244
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 39/213 (18%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++DM A VH GH+ + +MKP+I+G R I +L+++ + AL+ + I+
Sbjct: 3 IVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGTRNRVHIINLEKTLPMFNFALSELKKISL 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI--- 182
R G +LFVG S I++ A +C++F W GM TN + + +++ RL DL I
Sbjct: 63 RKGRILFVGTKRAASKGIKEAAINCEQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEIESK 122
Query: 183 ---------------------LTNTLTTV---------------LEPNPAIGEAAKMCIP 206
L N+L + N AI EA + IP
Sbjct: 123 DGTFSKLTKKEALIRTRELYKLENSLGGIKNMGGLPDCLFVIDAAHENIAIREANNLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQ 239
IVD+N NP+ + Y +PGNDD ++ Y +
Sbjct: 183 VFAIVDTNSNPDGVDYIIPGNDDAIRSVNLYLK 215
>gi|375090660|ref|ZP_09736973.1| 30S ribosomal protein S2 [Facklamia languida CCUG 37842]
gi|374565081|gb|EHR36357.1| 30S ribosomal protein S2 [Facklamia languida CCUG 37842]
Length = 265
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 47/242 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +MK YI+ R G I DL ++ +L+ +A N +
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKLVDEAYNVIRDTVA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKL--------------- 170
G+VLFVG Q IE+ A+ C ++ W G+ TN E +
Sbjct: 63 DGGVVLFVGTKKQAQQAIEEQAERCGQYYINHRWLGGLLTNWETIQGRIRRLKSLEQMEV 122
Query: 171 ----------------------------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
+ + R+PD++ + + + A+ EA K
Sbjct: 123 DGTFDVLPKKEVVELRKEWDRLEKFLGGIKDMPRIPDVIFIVDPRKERI----AVQEARK 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+ IP V +VD+NC+P+ I Y +P NDD AI+ Q A+++ + + D +SEK
Sbjct: 179 LNIPIVAMVDTNCDPDEIDYVIPANDDAIRAIKLITQAMAEAVIESNQGQIDVDAEVSEK 238
Query: 263 QE 264
+
Sbjct: 239 DD 240
>gi|291278484|ref|YP_003495319.1| 30S ribosomal protein S2 [Deferribacter desulfuricans SSM1]
gi|290753186|dbj|BAI79563.1| 30S ribosomal protein S2 [Deferribacter desulfuricans SSM1]
Length = 269
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 39/225 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K++ +A VH GH+ + +M+ Y++G + G I DL ++ + A F+ +
Sbjct: 4 ISIKNLLEAGVHFGHQTKRWNPKMQKYVFGKKNGIYIIDLQKTVQCFNQAYEFIRDMVKG 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
VLFVG Q I++ A+ CQ F W G TN + + RL +L + N+
Sbjct: 64 GASVLFVGTKKQAQEAIKEAAEKCQSFYVNNRWLGGTLTNFNTIKTRIQRLKELEEMFNS 123
Query: 187 ---------------------------------------LTTVLEPNPAIGEAAKMCIPT 207
+ + A+ EA K+ +P
Sbjct: 124 DYIKNYTKKEAARLKREYEKLKKNLYGIKDMQEIPDILFIIDIKREMNAVLEARKLGLPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V IVD+NC+P+L+ +P+PGNDD A Q A+L+GK+ +
Sbjct: 184 VAIVDTNCDPDLVDFPIPGNDDAIRACQLIAGRIADAVLEGKQLR 228
>gi|27467850|ref|NP_764487.1| 30S ribosomal protein S2 [Staphylococcus epidermidis ATCC 12228]
gi|57866730|ref|YP_188405.1| 30S ribosomal protein S2 [Staphylococcus epidermidis RP62A]
gi|242242539|ref|ZP_04796984.1| 30S ribosomal protein S2 [Staphylococcus epidermidis W23144]
gi|251810687|ref|ZP_04825160.1| 30S ribosomal protein S2 [Staphylococcus epidermidis BCM-HMP0060]
gi|282876312|ref|ZP_06285179.1| ribosomal protein S2 [Staphylococcus epidermidis SK135]
gi|293366780|ref|ZP_06613456.1| 30S ribosomal protein S2 [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417647413|ref|ZP_12297253.1| ribosomal protein S2 [Staphylococcus epidermidis VCU144]
gi|417656551|ref|ZP_12306234.1| ribosomal protein S2 [Staphylococcus epidermidis VCU028]
gi|417658933|ref|ZP_12308546.1| ribosomal protein S2 [Staphylococcus epidermidis VCU045]
gi|417909758|ref|ZP_12553491.1| ribosomal protein S2 [Staphylococcus epidermidis VCU037]
gi|417910780|ref|ZP_12554496.1| ribosomal protein S2 [Staphylococcus epidermidis VCU105]
gi|417913362|ref|ZP_12557029.1| ribosomal protein S2 [Staphylococcus epidermidis VCU109]
gi|418325818|ref|ZP_12937021.1| ribosomal protein S2 [Staphylococcus epidermidis VCU071]
gi|418328025|ref|ZP_12939155.1| ribosomal protein S2 [Staphylococcus epidermidis 14.1.R1.SE]
gi|418411675|ref|ZP_12984941.1| 30S ribosomal protein S2 [Staphylococcus epidermidis BVS058A4]
gi|418605438|ref|ZP_13168763.1| ribosomal protein S2 [Staphylococcus epidermidis VCU041]
gi|418607702|ref|ZP_13170925.1| ribosomal protein S2 [Staphylococcus epidermidis VCU057]
gi|418609923|ref|ZP_13173057.1| ribosomal protein S2 [Staphylococcus epidermidis VCU065]
gi|418612178|ref|ZP_13175224.1| ribosomal protein S2 [Staphylococcus epidermidis VCU117]
gi|418615579|ref|ZP_13178521.1| ribosomal protein S2 [Staphylococcus epidermidis VCU118]
gi|418616617|ref|ZP_13179541.1| ribosomal protein S2 [Staphylococcus epidermidis VCU120]
gi|418622144|ref|ZP_13184900.1| ribosomal protein S2 [Staphylococcus epidermidis VCU123]
gi|418624374|ref|ZP_13187049.1| ribosomal protein S2 [Staphylococcus epidermidis VCU125]
gi|418626807|ref|ZP_13189403.1| ribosomal protein S2 [Staphylococcus epidermidis VCU126]
gi|418629025|ref|ZP_13191541.1| ribosomal protein S2 [Staphylococcus epidermidis VCU127]
gi|418630398|ref|ZP_13192880.1| ribosomal protein S2 [Staphylococcus epidermidis VCU128]
gi|418634014|ref|ZP_13196412.1| ribosomal protein S2 [Staphylococcus epidermidis VCU129]
gi|418664712|ref|ZP_13226178.1| ribosomal protein S2 [Staphylococcus epidermidis VCU081]
gi|419768112|ref|ZP_14294249.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus IS-250]
gi|419770883|ref|ZP_14296945.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus IS-K]
gi|420163408|ref|ZP_14670155.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM095]
gi|420165209|ref|ZP_14671913.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM088]
gi|420167612|ref|ZP_14674264.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM087]
gi|420169795|ref|ZP_14676373.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM070]
gi|420172745|ref|ZP_14679243.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM067]
gi|420174976|ref|ZP_14681422.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM061]
gi|420176908|ref|ZP_14683302.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM057]
gi|420179501|ref|ZP_14685792.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM053]
gi|420185440|ref|ZP_14691532.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM040]
gi|420187540|ref|ZP_14693560.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM039]
gi|420191233|ref|ZP_14697166.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM037]
gi|420191697|ref|ZP_14697608.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM023]
gi|420194007|ref|ZP_14699836.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM021]
gi|420199040|ref|ZP_14704724.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM031]
gi|420202031|ref|ZP_14707626.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM018]
gi|420204178|ref|ZP_14709738.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM015]
gi|420206425|ref|ZP_14711935.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM008]
gi|420209466|ref|ZP_14714903.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM003]
gi|420211854|ref|ZP_14717210.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM001]
gi|420214265|ref|ZP_14719544.1| ribosomal protein S2 [Staphylococcus epidermidis NIH05005]
gi|420216095|ref|ZP_14721317.1| ribosomal protein S2 [Staphylococcus epidermidis NIH05001]
gi|420220037|ref|ZP_14725027.1| ribosomal protein S2 [Staphylococcus epidermidis NIH04008]
gi|420221953|ref|ZP_14726878.1| ribosomal protein S2 [Staphylococcus epidermidis NIH08001]
gi|420224815|ref|ZP_14729653.1| ribosomal protein S2 [Staphylococcus epidermidis NIH06004]
gi|420227046|ref|ZP_14731819.1| ribosomal protein S2 [Staphylococcus epidermidis NIH05003]
gi|420229369|ref|ZP_14734075.1| ribosomal protein S2 [Staphylococcus epidermidis NIH04003]
gi|420231727|ref|ZP_14736372.1| ribosomal protein S2 [Staphylococcus epidermidis NIH051668]
gi|420234415|ref|ZP_14738978.1| ribosomal protein S2 [Staphylococcus epidermidis NIH051475]
gi|421607243|ref|ZP_16048489.1| 30S ribosomal protein S2 [Staphylococcus epidermidis AU12-03]
gi|38258362|sp|Q8CSU2.1|RS2_STAES RecName: Full=30S ribosomal protein S2
gi|61215356|sp|Q5HPT5.1|RS2_STAEQ RecName: Full=30S ribosomal protein S2
gi|27315395|gb|AAO04529.1|AE016747_26 30S ribosomal protein S2 [Staphylococcus epidermidis ATCC 12228]
gi|57637388|gb|AAW54176.1| ribosomal protein S2 [Staphylococcus epidermidis RP62A]
gi|242233966|gb|EES36278.1| 30S ribosomal protein S2 [Staphylococcus epidermidis W23144]
gi|251805847|gb|EES58504.1| 30S ribosomal protein S2 [Staphylococcus epidermidis BCM-HMP0060]
gi|281295337|gb|EFA87864.1| ribosomal protein S2 [Staphylococcus epidermidis SK135]
gi|291319081|gb|EFE59451.1| 30S ribosomal protein S2 [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329724334|gb|EGG60846.1| ribosomal protein S2 [Staphylococcus epidermidis VCU144]
gi|329736212|gb|EGG72484.1| ribosomal protein S2 [Staphylococcus epidermidis VCU028]
gi|329736572|gb|EGG72838.1| ribosomal protein S2 [Staphylococcus epidermidis VCU045]
gi|341652367|gb|EGS76155.1| ribosomal protein S2 [Staphylococcus epidermidis VCU037]
gi|341654968|gb|EGS78704.1| ribosomal protein S2 [Staphylococcus epidermidis VCU105]
gi|341655644|gb|EGS79368.1| ribosomal protein S2 [Staphylococcus epidermidis VCU109]
gi|365227564|gb|EHM68757.1| ribosomal protein S2 [Staphylococcus epidermidis VCU071]
gi|365232412|gb|EHM73410.1| ribosomal protein S2 [Staphylococcus epidermidis 14.1.R1.SE]
gi|374402535|gb|EHQ73560.1| ribosomal protein S2 [Staphylococcus epidermidis VCU041]
gi|374403819|gb|EHQ74814.1| ribosomal protein S2 [Staphylococcus epidermidis VCU057]
gi|374406259|gb|EHQ77162.1| ribosomal protein S2 [Staphylococcus epidermidis VCU065]
gi|374410158|gb|EHQ80919.1| ribosomal protein S2 [Staphylococcus epidermidis VCU081]
gi|374817018|gb|EHR81209.1| ribosomal protein S2 [Staphylococcus epidermidis VCU118]
gi|374820060|gb|EHR84174.1| ribosomal protein S2 [Staphylococcus epidermidis VCU117]
gi|374820695|gb|EHR84771.1| ribosomal protein S2 [Staphylococcus epidermidis VCU120]
gi|374827519|gb|EHR91381.1| ribosomal protein S2 [Staphylococcus epidermidis VCU123]
gi|374827603|gb|EHR91464.1| ribosomal protein S2 [Staphylococcus epidermidis VCU125]
gi|374831351|gb|EHR95093.1| ribosomal protein S2 [Staphylococcus epidermidis VCU126]
gi|374835019|gb|EHR98650.1| ribosomal protein S2 [Staphylococcus epidermidis VCU127]
gi|374837939|gb|EHS01497.1| ribosomal protein S2 [Staphylococcus epidermidis VCU128]
gi|374838006|gb|EHS01563.1| ribosomal protein S2 [Staphylococcus epidermidis VCU129]
gi|383361033|gb|EID38416.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus IS-250]
gi|383362432|gb|EID39784.1| ribosomal protein S2 [Staphylococcus aureus subsp. aureus IS-K]
gi|394235097|gb|EJD80671.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM095]
gi|394236376|gb|EJD81910.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM088]
gi|394237640|gb|EJD83126.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM087]
gi|394241422|gb|EJD86836.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM067]
gi|394243095|gb|EJD88469.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM070]
gi|394244509|gb|EJD89851.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM061]
gi|394251815|gb|EJD96891.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM057]
gi|394253705|gb|EJD98701.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM053]
gi|394254426|gb|EJD99395.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM040]
gi|394255982|gb|EJE00918.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM039]
gi|394257834|gb|EJE02739.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM037]
gi|394265848|gb|EJE10495.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM023]
gi|394266705|gb|EJE11330.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM021]
gi|394270004|gb|EJE14527.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM018]
gi|394272726|gb|EJE17176.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM031]
gi|394274192|gb|EJE18617.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM015]
gi|394278264|gb|EJE22581.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM008]
gi|394278913|gb|EJE23225.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM003]
gi|394280364|gb|EJE24645.1| ribosomal protein S2 [Staphylococcus epidermidis NIHLM001]
gi|394283630|gb|EJE27795.1| ribosomal protein S2 [Staphylococcus epidermidis NIH05005]
gi|394287044|gb|EJE31018.1| ribosomal protein S2 [Staphylococcus epidermidis NIH04008]
gi|394289984|gb|EJE33854.1| ribosomal protein S2 [Staphylococcus epidermidis NIH08001]
gi|394292545|gb|EJE36287.1| ribosomal protein S2 [Staphylococcus epidermidis NIH05001]
gi|394294218|gb|EJE37904.1| ribosomal protein S2 [Staphylococcus epidermidis NIH06004]
gi|394297547|gb|EJE41144.1| ribosomal protein S2 [Staphylococcus epidermidis NIH05003]
gi|394299135|gb|EJE42686.1| ribosomal protein S2 [Staphylococcus epidermidis NIH04003]
gi|394302269|gb|EJE45717.1| ribosomal protein S2 [Staphylococcus epidermidis NIH051668]
gi|394304218|gb|EJE47625.1| ribosomal protein S2 [Staphylococcus epidermidis NIH051475]
gi|406657035|gb|EKC83428.1| 30S ribosomal protein S2 [Staphylococcus epidermidis AU12-03]
gi|410891258|gb|EKS39055.1| 30S ribosomal protein S2 [Staphylococcus epidermidis BVS058A4]
Length = 262
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 39/225 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +MK YI+ R G I DL ++ + + +A NFV I+
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKQISE 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVIL-T 184
G VLFVG Q ++ A+ +F + W G+ TN + + + + R+ ++ +
Sbjct: 63 EGGKVLFVGTKKQAQESVKAEAERAGQFYVNQRWLGGILTNYKTISKRIKRISEIEKMEE 122
Query: 185 NTLTTVL--------------------------------------EPNPAIGEAAKMCIP 206
+ L VL + AI EA K+ IP
Sbjct: 123 DGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQALFVVDPRKERNAIAEARKLNIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
VGIVD+NC+P+ I Y +P NDD A++ AIL+G++
Sbjct: 183 IVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEGQQG 227
>gi|288575129|ref|ZP_06393486.1| ribosomal protein S2 [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570870|gb|EFC92427.1| ribosomal protein S2 [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 265
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 39/226 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + + VH GH+ + +MKP+I+ R G I DL ++ L + +F+ ++
Sbjct: 2 SVVSMKQLLECGVHFGHQTRRWNPKMKPFIFTERNGVYIIDLQKTVRGLEKSYSFLREVS 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
G VLFVG Q I + A C + + W G+ TN + + + V ++ +L
Sbjct: 62 KEGGSVLFVGTKRQAQDTIREEAIRCGQHYINQRWLGGLLTNFQTIRKRVLKMVELDRME 121
Query: 181 ------------VILTNTLTTVLE-----------------------PNPAIGEAAKMCI 205
V+L LE + A+ EA K+ I
Sbjct: 122 SDGSWDDLTKKEVVLLKKQKAKLEKYLLGIKNMKVLPDAIFIIDPRREDIAVKEARKIGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
P + IVD+NC+P +I YP+PGNDD AI+ + +A+++G++
Sbjct: 182 PVISIVDTNCDPEVIDYPIPGNDDAIRAIKLISGLMASAVIEGRQG 227
>gi|25028471|ref|NP_738525.1| 30S ribosomal protein S2 [Corynebacterium efficiens YS-314]
gi|259507530|ref|ZP_05750430.1| 30S ribosomal protein S2 [Corynebacterium efficiens YS-314]
gi|38258379|sp|Q8FP70.1|RS2_COREF RecName: Full=30S ribosomal protein S2
gi|23493756|dbj|BAC18725.1| putative 30S ribosomal protein S2 [Corynebacterium efficiens
YS-314]
gi|259164915|gb|EEW49469.1| 30S ribosomal protein S2 [Corynebacterium efficiens YS-314]
Length = 276
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 40/229 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++++ DA VH GH+ + +M+ +I+ R G I DL Q+ + A FV
Sbjct: 3 VVTMRELLDAGVHFGHQTRRWNPKMRRFIFTERNGIYIIDLQQTLTYIDQAFEFVKETVA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
G +LFVG Q ++ A+ W GM TN + + + + R+ +L
Sbjct: 63 HGGTILFVGTKKQAQEAVQVEAERVGMPYVNHRWLGGMLTNFQTVSKRLHRMKELQAMDA 122
Query: 181 --------------------VILTNTLTTVLE---------------PNPAIGEAAKMCI 205
V L L+ + + + A+ EA K+ I
Sbjct: 123 AEDGYEGRTKRETLMLTRERVKLERVLSGIADMSRIPSALWIIDTNKEHIAVAEAHKLNI 182
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
P V I+D+NC+P+++ YPVPGNDD A +V TA+ +GKKA+++
Sbjct: 183 PVVAILDTNCDPDVVDYPVPGNDDAIRATALLSRVISTAVEEGKKAREE 231
>gi|349686225|ref|ZP_08897367.1| 30S ribosomal protein S2 [Gluconacetobacter oboediens 174Bp2]
Length = 261
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH + RM PY++GVR I DL Q+ +L AL + G
Sbjct: 8 MRQLLEAGVHFGHHTRRWNPRMAPYLFGVRNQVHIIDLQQTVPMLDRALKAIRDTVAGGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG + + + A+ C ++ W GM TN
Sbjct: 68 RVLFVGTKRAAADQVAEAAKRCGQYYVNHRWLGGMLTNWKTITGSIKRLRGIDDMLENGT 127
Query: 167 --------------SEKLFRAVTR------LPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
EKL R++ LPD++ + +T L A+ EA K+ IP
Sbjct: 128 QGLTKKEVLDITRDREKLERSLGGIKEMGGLPDILFVIDTNKEKL----AVEEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V ++DSN +P +TYP+PGNDD AI YC++ +A+L G A+
Sbjct: 184 VVAVLDSNSDPRGVTYPIPGNDDAIRAIALYCELVSSAVLDGISAE 229
>gi|254457743|ref|ZP_05071171.1| ribosomal protein S2 [Sulfurimonas gotlandica GD1]
gi|373867927|ref|ZP_09604325.1| ribosomal protein S2 [Sulfurimonas gotlandica GD1]
gi|207086535|gb|EDZ63819.1| ribosomal protein S2 [Sulfurimonas gotlandica GD1]
gi|372470028|gb|EHP30232.1| ribosomal protein S2 [Sulfurimonas gotlandica GD1]
Length = 254
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 100/227 (44%), Gaps = 47/227 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +KD+ + VH GH+ + +MK YI+GVR+ I DL ++ R+ V A
Sbjct: 1 MVTMKDLLECGVHFGHQTRRWNPKMKKYIFGVRKNIYIIDLQKTLRYFRNTYTIVMDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
VLFVG Q + A C W GM TN
Sbjct: 61 EGQTVLFVGTKKQARSSVRDAAIACGMPYVDNRWLGGMLTNFPTIQKSIRKLDVITEMQE 120
Query: 167 ------------------SEKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + +LPD++ + + + + + AI EA
Sbjct: 121 NGQIDLLTKKEALMLSRKKEKLQEYFGGIRNMKKLPDMLFVVDAV----KEHIAILEARC 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+ IP V +D+NC+P+LITYP+PGNDD +IQ +C+ AI +GK
Sbjct: 177 LGIPVVAPLDTNCDPDLITYPIPGNDDAIRSIQLFCREMTEAINEGK 223
>gi|86156701|ref|YP_463486.1| 30S ribosomal protein S2 [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773212|gb|ABC80049.1| SSU ribosomal protein S2P [Anaeromyxobacter dehalogenans 2CP-C]
Length = 301
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 47/224 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K + +A VH GH+ + +MKP+I+G R G I DL ++ L R+AL FV+ + G
Sbjct: 1 MKALLEAGVHFGHQTKRWNPKMKPFIFGARNGIYIIDLQKTVGLARNALRFVSDSVAKGG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VLFVG Q I + A +F T W G TN
Sbjct: 61 SVLFVGTKKQAQDAIREEASRSGQFFVTNRWLGGTLTNFKTVKQGIDRLKTIEKMAADGT 120
Query: 167 ---------------SEKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
EKL + ++RLP + + +T + + A+ EA ++ I
Sbjct: 121 YERLPKKEVAQLEREREKLEKNLGGIKELSRLPSALFVIDT----KKEHIAVHEANRLGI 176
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
P V +VD+NC+P I Y +PGNDD +I+ + A ++GK
Sbjct: 177 PVVAVVDTNCDPEGIDYVIPGNDDAIRSIRLFTGKVAEACIEGK 220
>gi|386747797|ref|YP_006221005.1| 30S ribosomal protein S2 [Helicobacter cetorum MIT 99-5656]
gi|384554039|gb|AFI05795.1| 30S ribosomal protein S2 [Helicobacter cetorum MIT 99-5656]
Length = 264
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 47/242 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +KD+ + VH GH+ + + K +I+GVR+ I DL ++ R N V
Sbjct: 1 MVTMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDATA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+ ++FVG Q + +++ AQ+ Q W GM TN
Sbjct: 61 QGKSIMFVGTKKQANETLKEFAQEIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEMEN 120
Query: 167 ---------SEKLF---------------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + ++PD++ + + V + A+ EA K
Sbjct: 121 SGQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFIID----VAKEKIAVAEARK 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+ IP V +D+NC+P+L+ YP+PGNDD +I+ +C+ AIL+G++ Q+ + E
Sbjct: 177 LHIPIVAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEGRELMQEEIAHSDEN 236
Query: 263 QE 264
E
Sbjct: 237 SE 238
>gi|397166848|ref|ZP_10490292.1| ribosomal protein S2 [Enterobacter radicincitans DSM 16656]
gi|396091936|gb|EJI89502.1| ribosomal protein S2 [Enterobacter radicincitans DSM 16656]
Length = 241
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL+ + IA R
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALDELKKIAAR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S ++++A +C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVKESALNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
IVD+N +P+ + + +PGNDD A+ Y + +G+ +
Sbjct: 184 FAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLNAVAATVREGRSS 227
>gi|414562591|ref|YP_005617782.1| 30S ribosomal protein S2 [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087127|gb|ADP67207.1| 30S ribosomal protein S2 [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
Length = 244
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 39/221 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +++M A VH GH+ + +MKP+I+G+R I +L+++ + AL+ + IA
Sbjct: 3 IVSMREMLKAGVHFGHQTRYWNPKMKPFIFGIRNRVHIINLEKTLPMFHFALSELKKIAL 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI--- 182
+ G +LFVG S I++ A +C++F W GM TN + + +++ RL DL I
Sbjct: 63 KKGRILFVGTKKAASKGIKEVAINCEQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEIESK 122
Query: 183 ---------------------LTNTLTTV---------------LEPNPAIGEAAKMCIP 206
L N+L + N AI EA + IP
Sbjct: 123 DGTFSKLTKKEALIRSRELFKLENSLGGIKNMGGLPDCLFVIDAAHENIAITEANNLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILK 247
IVD+N NP+ + Y +PGNDD ++ Y + I K
Sbjct: 183 VFSIVDTNSNPDGVDYIIPGNDDAIRSVNLYLKSIMLTISK 223
>gi|464713|sp|P34831.1|RS2_SPIPL RecName: Full=30S ribosomal protein S2
gi|296030|emb|CAA37700.1| ribosomal protein S2 [Arthrospira platensis]
gi|227458|prf||1704175A ribosomal protein S2
Length = 251
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 105/225 (46%), Gaps = 43/225 (19%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKPYI+G R I +L+++ L DAL FV +A
Sbjct: 4 VTMRDMLKAGVHFGHQTRFWNPKMKPYIFGARNKIHIVNLEKTLPLFNDALGFVNKLASS 63
Query: 127 DGIVLFVG--QSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------ 166
+ +LFVG ++AQ ++ E T H W GM TN
Sbjct: 64 NNTILFVGTKRAAQKAVAEEATRCGMPYVDHR--WLGGMLTNWKTIRQSIKRFRDLEAQA 121
Query: 167 -------------------SEKLFRAVTRLPDLVILTNTL--TTVLEPNPAIGEAAKMCI 205
EKL R++ + D+ L + L V + A+ EA K+ I
Sbjct: 122 NDGTFDKLTKKEALMRRREMEKLERSIGGIKDMGGLPDALFVIDVDHEDIAVQEARKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
P + +VD+N NP+ + Y +PGNDD AIQ Y AI++G++
Sbjct: 182 PVIAVVDTNSNPDGVDYFIPGNDDAIRAIQLYVGAVADAIIEGRQ 226
>gi|114562448|ref|YP_749961.1| 30S ribosomal protein S2 [Shewanella frigidimarina NCIMB 400]
gi|122300317|sp|Q085E2.1|RS2_SHEFN RecName: Full=30S ribosomal protein S2
gi|114333741|gb|ABI71123.1| SSU ribosomal protein S2P [Shewanella frigidimarina NCIMB 400]
Length = 242
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 105/233 (45%), Gaps = 45/233 (19%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R G I +L+ + + +AL F+++IA +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNIASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG I+ +A C ++ W GM TN + + +++ RL +L
Sbjct: 64 KGKVLFVGTKRAAGEAIKASALSCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQSVD 123
Query: 181 ---------------------------VILTNTLTTVL------EPNPAIGEAAKMCIPT 207
+ L VL + AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRSRELDKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK------KAKQD 254
V +VD+N P+ + Y VPGNDD AI+ Y A G+ +A+QD
Sbjct: 184 VAVVDTNSAPDGVNYIVPGNDDAMRAIRLYTSSVAAAANAGRGQDLAVQAEQD 236
>gi|15616847|ref|NP_240060.1| 30S ribosomal protein S2 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681601|ref|YP_002467987.1| 30S ribosomal protein S2 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682158|ref|YP_002468542.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471287|ref|ZP_05635286.1| 30S ribosomal protein S2 [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|384226039|ref|YP_005617202.1| 30S ribosomal protein S2 [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|384226570|ref|YP_005618321.1| 30S ribosomal protein S2 [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
gi|384227096|ref|YP_005618846.1| 30S ribosomal protein S2 [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|11387053|sp|P57325.1|RS2_BUCAI RecName: Full=30S ribosomal protein S2
gi|254764462|sp|B8D928.1|RS2_BUCA5 RecName: Full=30S ribosomal protein S2
gi|254764463|sp|B8D7D2.1|RS2_BUCAT RecName: Full=30S ribosomal protein S2
gi|25294447|pir||B84957 30S ribosomal protein S2 [imported] - Buchnera sp. (strain APS)
gi|10038911|dbj|BAB12946.1| 30S ribosomal protein S2 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219621891|gb|ACL30047.1| 30S ribosomal protein S2 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624444|gb|ACL30599.1| 30S ribosomal protein S2 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311085972|gb|ADP66054.1| 30S ribosomal protein S2 [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086546|gb|ADP66627.1| 30S ribosomal protein S2 [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087667|gb|ADP67746.1| 30S ribosomal protein S2 [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 244
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 39/221 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +++M A VH GH+ + +MKP+I+G+R I +L+++ + AL+ + IA
Sbjct: 3 IVSMREMLKAGVHFGHQTRYWNPKMKPFIFGIRNRVHIINLEKTLPMFHFALSELKKIAL 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI--- 182
+ G +LFVG S I++ A +C++F W GM TN + + +++ RL DL I
Sbjct: 63 KKGRILFVGTKKAASKGIKEVAINCEQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEIESK 122
Query: 183 ---------------------LTNTLTTV---------------LEPNPAIGEAAKMCIP 206
L N+L + N AI EA + IP
Sbjct: 123 DGTFSKLTKKEALIRSRELFKLENSLGGIKNMGGLPDCLFVIDAAHENIAITEANNLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILK 247
IVD+N NP+ + Y +PGNDD ++ Y + I K
Sbjct: 183 VFSIVDTNSNPDGVDYIIPGNDDAIRSVNLYLKSIMLTISK 223
>gi|91775883|ref|YP_545639.1| 30S ribosomal protein S2 [Methylobacillus flagellatus KT]
gi|122985511|sp|Q1H139.1|RS2_METFK RecName: Full=30S ribosomal protein S2
gi|91709870|gb|ABE49798.1| SSU ribosomal protein S2P [Methylobacillus flagellatus KT]
Length = 249
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 43/224 (19%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYI+G R I +L+++ L DAL +V ++
Sbjct: 3 VTMRQMLEAGVHFGHQTRYWNPKMAPYIFGERNKIHIINLEKTLPLFEDALKYVRQLSAN 62
Query: 127 DGIVLFVGQSAQNSLLIEKTAQ--DCQEFAHTRFWRQGMFTN------------------ 166
G +LFVG Q +I++ AQ C H W GM TN
Sbjct: 63 KGRILFVGTKRQARDIIKEEAQRAGCPYVNHR--WLGGMLTNFKTVKQSIKRLTEYEALL 120
Query: 167 -------------------SEKLFRAVTRLPDLVILTNT--LTTVLEPNPAIGEAAKMCI 205
EKL R++ + ++ L + + V + A+ EAAK+ I
Sbjct: 121 QDGGIEKFGKKEALGYKREVEKLERSIGGIKEMGGLPDAIFIIDVGHESGAVTEAAKLGI 180
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
P +G+VD+N +P + Y +PGNDD+ AI+ Y + A+L+G+
Sbjct: 181 PVIGVVDTNNSPEGVAYVIPGNDDSSRAIRLYARGIADAVLEGR 224
>gi|387771286|ref|ZP_10127452.1| ribosomal protein S2 [Pasteurella bettyae CCUG 2042]
gi|386902491|gb|EIJ67331.1| ribosomal protein S2 [Pasteurella bettyae CCUG 2042]
Length = 241
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 104/228 (45%), Gaps = 39/228 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +M+ +IYG R G I +L+++ + DAL + IA
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMRAFIYGPRNGVHIINLEKTVPMFNDALTELTRIASN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
+G +LFVG ++ A DCQ++ W GM TN + + +++ RL DL
Sbjct: 64 NGKILFVGTKRAAQEAVQTAALDCQQYFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 183 -----LTNTLTTV-------LE------------PNP-----------AIGEAAKMCIPT 207
LT V LE P+ AI EA + IP
Sbjct: 124 GTFEKLTKKEALVRTREMEKLELSLGGIKDMAGLPDALFVIGADYEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
+VD+N +P+ + + +PGNDD AIQ Y A+ +G+ + T
Sbjct: 184 FAVVDTNSSPDGVDFVIPGNDDATRAIQLYVTAAAAAVKEGRSEQTTT 231
>gi|59712569|ref|YP_205345.1| 30S ribosomal protein S2 [Vibrio fischeri ES114]
gi|197336329|ref|YP_002156790.1| 30S ribosomal protein S2 [Vibrio fischeri MJ11]
gi|423686742|ref|ZP_17661550.1| 30S ribosomal protein S2 [Vibrio fischeri SR5]
gi|75506956|sp|Q5E3D9.1|RS2_VIBF1 RecName: Full=30S ribosomal protein S2
gi|238690250|sp|B5F9X6.1|RS2_VIBFM RecName: Full=30S ribosomal protein S2
gi|59480670|gb|AAW86457.1| 30S ribosomal subunit protein S2 [Vibrio fischeri ES114]
gi|197317819|gb|ACH67266.1| ribosomal protein S2 [Vibrio fischeri MJ11]
gi|371494810|gb|EHN70408.1| 30S ribosomal protein S2 [Vibrio fischeri SR5]
Length = 242
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 99/222 (44%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+Q+ + +AL +A I +
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEQTVPMFNEALAELAKIGSK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G VLFVG S +++ A + +F W GM TN + + +++ RL D +
Sbjct: 64 KGKVLFVGTKRAASEAVKEAAINSDQFYVNNRWLGGMLTNYKTVRQSIKRLKDFEVQSQD 123
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L +L + N AI EA + IP
Sbjct: 124 GTFEKLTKKEALMRTRDMEKLEKSLGGIKNMNGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+VD+N NP+ + Y +PGNDD AIQ Y A+ G+
Sbjct: 184 FAVVDTNSNPDGVDYIIPGNDDAIRAIQLYLNAAADAVKSGR 225
>gi|418055546|ref|ZP_12693600.1| ribosomal protein S2 [Hyphomicrobium denitrificans 1NES1]
gi|353209824|gb|EHB75226.1| ribosomal protein S2 [Hyphomicrobium denitrificans 1NES1]
Length = 329
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 100/226 (44%), Gaps = 45/226 (19%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M P+IYG R I DL Q+ +L AL V+ G
Sbjct: 8 MRQLLEAGVHFGHQAHRWNPKMAPFIYGSRNKIHILDLTQTVPMLHQALLKVSDTVAGGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFV Q S I + A+ ++ W G TN + + +++ RL
Sbjct: 68 RVLFVATKRQASDGIAEAAKRSAQYFINHRWLGGTLTNWKTVSQSIRRLRQLDDILADPQ 127
Query: 178 ------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIPT 207
PDL+++ +T + AI EA K+ IP
Sbjct: 128 GRTKKEILNLTRERDKLNQSLGGIKDMGGTPDLLVVIDTNKESI----AIQEARKLNIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V IVD+NC+P+ I YPVPGNDD AI YC + A L G + Q
Sbjct: 184 VAIVDTNCDPDGIDYPVPGNDDAGRAITLYCDLMARAALDGIERAQ 229
>gi|264679367|ref|YP_003279274.1| 30S ribosomal protein S2 [Comamonas testosteroni CNB-2]
gi|299532326|ref|ZP_07045719.1| 30S ribosomal protein S2 [Comamonas testosteroni S44]
gi|262209880|gb|ACY33978.1| ribosomal protein S2 [Comamonas testosteroni CNB-2]
gi|298719734|gb|EFI60698.1| 30S ribosomal protein S2 [Comamonas testosteroni S44]
Length = 250
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 40/225 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +++M +A VH GH+ + +M P+I+G R I +L++S + ++A F +
Sbjct: 3 VTMREMLEAGVHFGHQTRFWNPKMAPFIFGARNKIHIINLEKSLPMFQEAQKFAKQLTAN 62
Query: 127 DGIVLFVGQSAQ-NSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPD------ 179
G +L VG Q L+ E+ + F R W GM TN + + ++ RL D
Sbjct: 63 GGTILMVGTKRQARELVAEEAKRAGVPFVDQR-WLGGMLTNFKTVKTSIKRLKDMKAQQE 121
Query: 180 -----------------LVILTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L L + + + N AI EA K+ IP
Sbjct: 122 AGLESMSKKEQLMFVRELEKLEKDIGGIQDMNGLPDAIFVIDVGFHKIAIAEAKKLGIPL 181
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
+G+VD+N NP+ I Y +PGNDD+ A+Q Y Q AIL+G++A+
Sbjct: 182 IGVVDTNHNPDGIDYVIPGNDDSAKAVQLYAQGIADAILEGREAR 226
>gi|409349357|ref|ZP_11232841.1| 30S ribosomal protein S2 [Lactobacillus equicursoris CIP 110162]
gi|407878227|emb|CCK84899.1| 30S ribosomal protein S2 [Lactobacillus equicursoris CIP 110162]
Length = 253
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + +A VH GH+ D +MKPYI+ R G I DL ++ ++L DA N+V +A
Sbjct: 2 SVVSMKQLLEAGVHFGHQTRRWDPKMKPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAVA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
DG+ LFVG Q I + A ++ + W G TN + V RL DL
Sbjct: 62 QDDGVFLFVGTKKQAQEAIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKDLKKMA 121
Query: 181 -------------VILTNTLTT-------------------VLEPNP---AIGEAAKMCI 205
+LT + V++P A+ EA K+ I
Sbjct: 122 EDGTFDVLPKKEVALLTKEMDKLQKFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
P V +VD+N +P I +P NDD AI+ A+++GK+
Sbjct: 182 PVVAMVDTNTDPTPIDVIIPSNDDAIRAIRLIAGAMADAVIEGKQG 227
>gi|291545676|emb|CBL18784.1| SSU ribosomal protein S2P [Ruminococcus sp. SR1/5]
Length = 242
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 96/222 (43%), Gaps = 39/222 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K + +A VH GH+ + +M PYIY R G I DL QS ++ DA N VA I G
Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQQSVGMVDDAYNAVADIVANGG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
+LFVG Q I A+ C EF W GM TN + + + RL
Sbjct: 61 HILFVGTKKQAQDAIRTEAERCGEFFVNERWLGGMLTNFKTIQSRIARLKEIETMEADGT 120
Query: 178 -------------PDLVILTNTLTTVLE----PNP-----------AIGEAAKMCIPTVG 209
+LV L L + E P+ + EA + IP +G
Sbjct: 121 FDVLPKKEVIELRKELVKLQKNLGGIKEMKRIPDAIFIVDPKKERICVQEAHTLGIPLIG 180
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
I D+NC+P + Y +PGNDD A++ A+++ K+
Sbjct: 181 ICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEAKQG 222
>gi|329850616|ref|ZP_08265461.1| ribosomal protein S2 [Asticcacaulis biprosthecum C19]
gi|328840931|gb|EGF90502.1| ribosomal protein S2 [Asticcacaulis biprosthecum C19]
Length = 266
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 103/225 (45%), Gaps = 38/225 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ ++ + +A H GH+ + +M+ Y++G R I DL Q+ L AL +A
Sbjct: 6 ISMRLLLEAGAHFGHQTHRWNPKMERYLFGARSNIHIIDLSQTLPLFHQALLKAREVAAA 65
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL--VILT 184
G VLFVG Q + A+ ++ W G TN + ++ RL +L V+ +
Sbjct: 66 GGRVLFVGTKRQAQGPVAVAAKRSAQYYVNHRWLGGTLTNWRTISGSIARLRELENVLDS 125
Query: 185 N----------TLTT-----------------------VLEPNP---AIGEAAKMCIPTV 208
N TLT V++ N AI EA K+ IP +
Sbjct: 126 NPAGRSKKELLTLTREREKLELSLGGIKDMGGIPDLMFVIDTNKESIAIQEARKLNIPVI 185
Query: 209 GIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
GI+DSN +P+ ITYPVPGNDD A+Q YC + A+L G A Q
Sbjct: 186 GILDSNSDPDGITYPVPGNDDAARALQLYCDLIADAVLDGLAAGQ 230
>gi|271499495|ref|YP_003332520.1| 30S ribosomal protein S2 [Dickeya dadantii Ech586]
gi|270343050|gb|ACZ75815.1| ribosomal protein S2 [Dickeya dadantii Ech586]
Length = 241
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL + I+ R
Sbjct: 4 VSMRDMLKAGVHFGHQKRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKISSR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A +C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQAQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALLRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + Y +PGNDD A+ Y A+ +G+
Sbjct: 184 FAIVDTNSDPDGVDYIIPGNDDAIRAVSLYLNAVAAAVREGR 225
>gi|332527870|ref|ZP_08403907.1| SSU ribosomal protein S2P [Rubrivivax benzoatilyticus JA2]
gi|332112447|gb|EGJ12240.1| SSU ribosomal protein S2P [Rubrivivax benzoatilyticus JA2]
Length = 247
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 102/221 (46%), Gaps = 38/221 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +++M +A VH GH+ + +M PYIYG R I +L+++ L DA+ FV ++ R
Sbjct: 3 VSMREMLEAGVHFGHQTRFWNPKMAPYIYGHRNKIHIINLEKTQPLFEDAMKFVRQLSAR 62
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPD------- 179
G +L +G Q +I AQ C + W GM TN + + ++ +L D
Sbjct: 63 RGTILMIGTKRQAREVIAMEAQRCGMPYVDQRWLGGMLTNFKTVKGSLKKLKDMQATKEA 122
Query: 180 ----------------LVILTNTLTTVLEPNP---------------AIGEAAKMCIPTV 208
LV L + + + A+ EA K+ IP +
Sbjct: 123 GMEQMIKKEALLFDRELVKLEKDIGGIQDMGALPDAMFVIDVGYHKIAVAEAKKLGIPVI 182
Query: 209 GIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
G+VD+N +P I Y +PGNDD+ A+ Y + A+L+G+
Sbjct: 183 GVVDTNHSPVGIDYVIPGNDDSAKAVALYARAVADAVLEGR 223
>gi|99081051|ref|YP_613205.1| 30S ribosomal protein S2 [Ruegeria sp. TM1040]
gi|123252399|sp|Q1GHC3.1|RS2_SILST RecName: Full=30S ribosomal protein S2
gi|99037331|gb|ABF63943.1| SSU ribosomal protein S2P [Ruegeria sp. TM1040]
Length = 256
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 99/226 (43%), Gaps = 46/226 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM P+IYG R G I DL Q+ +L AL + + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMSPFIYGARNGIHIMDLTQTVPMLDQALTAIRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----------- 177
VLFVG Q + I + A+ ++ W G TN + + +++ RL
Sbjct: 68 RVLFVGTKRQAAAPIAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSINRLKEIDERMAAGA 127
Query: 178 -------------------------------PDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
PDL+ + + L AI EA K+ IP
Sbjct: 128 EGLTKKERLGMERDQEKLQASLGGIRDMGGVPDLLFVIDVKKEAL----AIAEANKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V +VD+NC+P+ + Y +PGNDD AI YC + A L G A+
Sbjct: 184 VVAVVDTNCSPDGVDYIIPGNDDAARAISLYCDLVARAALDGMSAQ 229
>gi|386834985|ref|YP_006240302.1| 30S ribosomal protein S2 [Pasteurella multocida subsp. multocida
str. 3480]
gi|385201688|gb|AFI46543.1| ribosomal protein S2 [Pasteurella multocida subsp. multocida str.
3480]
Length = 261
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+IYG R G I +L+++ + +AL + IA
Sbjct: 25 VSMRDMLQAGVHFGHQTRYWNPKMKPFIYGPRNGVHIINLEKTVPMFNEALVELTRIAGN 84
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
+G +LFVG + ++ A DCQ++ W GM TN + + +++ RL DL
Sbjct: 85 NGKILFVGTKRAATEAVKAAALDCQQYYVNHRWLGGMLTNWKTVRQSIRRLKDLETQSQD 144
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L +L + E P+ A+ EA + IP
Sbjct: 145 GTFDKLTKKEALMRTREMEKLELSLGGIKEMGGLPDALFVIGADHEHIAVKEANNLGIPV 204
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD AIQ Y TA+ +G+
Sbjct: 205 FAIVDTNSDPDGVDFVIPGNDDAARAIQLYLSAAATAVKEGR 246
>gi|83589880|ref|YP_429889.1| 30S ribosomal protein S2 [Moorella thermoacetica ATCC 39073]
gi|123766794|sp|Q2RJP3.1|RS2_MOOTA RecName: Full=30S ribosomal protein S2
gi|83572794|gb|ABC19346.1| SSU ribosomal protein S2P [Moorella thermoacetica ATCC 39073]
Length = 238
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 39/226 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M PYI+ R G I DL ++ + + +A NF+ ++
Sbjct: 3 IISMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQRTVKKIEEAYNFIRDLSR 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G VLFVG Q +++ A+ C F W G TN + + R + RL +L +
Sbjct: 63 DGGKVLFVGTKKQAQESVKEEAERCGMFYVNVRWLGGTLTNFQTIRRRIERLKELERMEE 122
Query: 186 TLTTVLEPNP---------------------------------------AIGEAAKMCIP 206
T L P A+ E ++ IP
Sbjct: 123 EGTFDLLPKKEVAHLRGEREKLERFLGGIKEMKSLPDALFIIDPRKERIAVAEGRRLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V IVD+NC+P+ I Y +PGNDD A++ A+++G++ +
Sbjct: 183 IVAIVDTNCDPDEIDYVIPGNDDAIRAVRLLTSKMADAVIEGQQGQ 228
>gi|383188838|ref|YP_005198966.1| 30S ribosomal protein S2 [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371587096|gb|AEX50826.1| ribosomal protein S2 [Rahnella aquatilis CIP 78.65 = ATCC 33071]
Length = 241
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL + I+ R
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELQKISSR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A +C +F W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASEAVKEAAHNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFEKLTKKEALMRTRELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A+ Y + +G+
Sbjct: 184 FSIVDTNSDPDGVDFVIPGNDDAIRAVNLYLSAVAATVREGR 225
>gi|322831588|ref|YP_004211615.1| 30S ribosomal protein S2 [Rahnella sp. Y9602]
gi|384256702|ref|YP_005400636.1| 30S ribosomal protein S2 [Rahnella aquatilis HX2]
gi|321166789|gb|ADW72488.1| ribosomal protein S2 [Rahnella sp. Y9602]
gi|380752678|gb|AFE57069.1| 30S ribosomal protein S2 [Rahnella aquatilis HX2]
Length = 241
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL + I+ R
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELQKISSR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A +C +F W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASEAVKEAAHNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFEKLTKKEALMRTRELAKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A+ Y + +G+
Sbjct: 184 FSIVDTNSDPDGVDFVIPGNDDAIRAVNLYLSAVAATVREGR 225
>gi|383310936|ref|YP_005363746.1| 30S ribosomal protein S2 [Pasteurella multocida subsp. multocida
str. HN06]
gi|380872208|gb|AFF24575.1| 30S ribosomal protein S2 [Pasteurella multocida subsp. multocida
str. HN06]
Length = 240
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+IYG R G I +L+++ + +AL + IA
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIYGPRNGVHIINLEKTVPMFNEALVELTRIAGN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
+G +LFVG + ++ A DCQ++ W GM TN + + +++ RL DL
Sbjct: 64 NGKILFVGTKRAATEAVKAAALDCQQYYVNHRWLGGMLTNWKTVRQSIRRLKDLETQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L +L + E P+ A+ EA + IP
Sbjct: 124 GTFDKLTKKEALMRTREMEKLELSLGGIKEMGGLPDALFVIGADHEHIAVKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD AIQ Y TA+ +G+
Sbjct: 184 FAIVDTNSDPDGVDFVIPGNDDAARAIQLYLSAAATAVKEGR 225
>gi|357384384|ref|YP_004899108.1| 30S ribosomal protein S2 [Pelagibacterium halotolerans B2]
gi|351593021|gb|AEQ51358.1| SSU ribosomal protein S2p (SAe) [Pelagibacterium halotolerans B2]
Length = 266
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 101/219 (46%), Gaps = 40/219 (18%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + +M+ YI+GVR I DL Q+ L AL V+ G
Sbjct: 8 MRQLLEAGVHFGHQKHRWNPKMERYIFGVRNDIHILDLSQTVPALYRALQLVSDTVADGG 67
Query: 129 IVLFVGQSAQNSLLIEKTA-QDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTL 187
VLFVG Q + L+ + A Q Q + ++R W GM TN + + ++ RL +L L
Sbjct: 68 RVLFVGTKRQAAPLVAEAARQSAQYYVNSR-WLGGMLTNWQTISNSIARLRELESLQAEG 126
Query: 188 TTVLE---------------------------PN-----------PAIGEAAKMCIPTVG 209
T L PN AI EA ++ IP V
Sbjct: 127 ATGLTKRERLQRSREQERLERDLGGIKDMGNIPNLMFVIDTNKEANAIKEARRLGIPVVA 186
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
IVD+NC+P+++ Y +PGNDD A++ Y + A + G
Sbjct: 187 IVDTNCDPDIVDYAIPGNDDAARALELYLSLVSKAAIDG 225
>gi|332289927|ref|YP_004420779.1| 30S ribosomal protein S2 [Gallibacterium anatis UMN179]
gi|330432823|gb|AEC17882.1| 30S ribosomal protein S2 [Gallibacterium anatis UMN179]
Length = 249
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 39/226 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +++M A VH GH+ + +MKP+I+G R G I +L+++ + AL + IA
Sbjct: 4 VTMREMLQAGVHFGHQTRYWNPKMKPFIFGPRNGVHIINLEKTLPMFNAALEELKRIAQN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
+G +LFVG + ++ A DCQ+F W GM TN + + +++ RL DL
Sbjct: 64 NGKILFVGTKRAATDPVQAAALDCQQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 181 ----------VILTNTLTTVLE------------PNP-----------AIGEAAKMCIPT 207
++ LE P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTREMEKLELSLGGIKDMGGLPDALFVIAADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
IVD+N +P+ + Y +PGNDD AIQ Y A+ +GK Q
Sbjct: 184 FAIVDTNSDPDGVDYVIPGNDDAVRAIQLYLTAAADAVKEGKAQAQ 229
>gi|120599552|ref|YP_964126.1| 30S ribosomal protein S2 [Shewanella sp. W3-18-1]
gi|146292451|ref|YP_001182875.1| 30S ribosomal protein S2 [Shewanella putrefaciens CN-32]
gi|386313128|ref|YP_006009293.1| 30S ribosomal protein S2 [Shewanella putrefaciens 200]
gi|166226754|sp|A4Y543.1|RS2_SHEPC RecName: Full=30S ribosomal protein S2
gi|166226756|sp|A1RLM7.1|RS2_SHESW RecName: Full=30S ribosomal protein S2
gi|120559645|gb|ABM25572.1| SSU ribosomal protein S2P [Shewanella sp. W3-18-1]
gi|145564141|gb|ABP75076.1| SSU ribosomal protein S2P [Shewanella putrefaciens CN-32]
gi|319425753|gb|ADV53827.1| ribosomal protein S2 [Shewanella putrefaciens 200]
Length = 242
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 45/233 (19%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R G I +L+ + + +AL F++++A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG I++ A C ++ W GM TN + + +++ RL +L
Sbjct: 64 KGKVLFVGTKRAAGEAIKEAAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQSVD 123
Query: 181 -----------VILTNTLTTVLEP----------------------NPAIGEAAKMCIPT 207
++ T L + + + AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK------KAKQD 254
V +VD+N P+ + Y VPGNDD AI+ Y A G+ +A+QD
Sbjct: 184 VAVVDTNSAPDGVNYIVPGNDDAMRAIRLYTTSVAAAAKAGRGQDLAVQAEQD 236
>gi|383816415|ref|ZP_09971813.1| 30S ribosomal protein S2 [Serratia sp. M24T3]
gi|383294720|gb|EIC83056.1| 30S ribosomal protein S2 [Serratia sp. M24T3]
Length = 241
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL + I+ R
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKISSR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S ++ A +C +F W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASEAVKDAAHNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFEKLTKKEALMRTRELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A+ Y + +G+
Sbjct: 184 FAIVDTNSDPDGVDFVIPGNDDAIRAVNLYLSAVAATVREGR 225
>gi|284048718|ref|YP_003399057.1| 30S ribosomal protein S2 [Acidaminococcus fermentans DSM 20731]
gi|283952939|gb|ADB47742.1| ribosomal protein S2 [Acidaminococcus fermentans DSM 20731]
Length = 249
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 39/223 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M PYI+ R G I DL ++ + + + +F+ +A
Sbjct: 3 IVSMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKKVEECYSFLRELAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
+ G VLFVG Q I++ A+ C F W GM TN + + + RL DL
Sbjct: 63 QGGTVLFVGTKKQAQAAIKEEAERCGMFYVNERWLGGMLTNFKTIQTRIKRLHDLEKMEE 122
Query: 181 ------------VILTNTLTT-------------------VLEPNP---AIGEAAKMCIP 206
++L + + V++P AI EA K+ IP
Sbjct: 123 EGTFELLPKKEVIVLRHEMAKLEKYLGGIKDMKKLPSALFVIDPRKEHNAILEARKLHIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
V VD+NC+P+ + Y +P NDD A++ A+L+GK
Sbjct: 183 IVATVDTNCDPDEVDYLMPANDDAIRAVRLLTSKMADAVLEGK 225
>gi|422843958|ref|ZP_16890668.1| 30S ribosomal protein S2 [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
gi|325685956|gb|EGD28019.1| 30S ribosomal protein S2 [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 253
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + +A VH GH+ D +MKPYI+ R G I DL ++ ++L DA N+V +A
Sbjct: 2 SVVSMKQLLEAGVHFGHQTRRWDPKMKPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAVA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
DG+ LFVG Q I + A ++ + W G TN + V RL DL
Sbjct: 62 QDDGVFLFVGTKKQAQEAIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKDLKKMA 121
Query: 181 -------------VILTNTLTT-------------------VLEPNP---AIGEAAKMCI 205
+LT + V++P A+ EA K+ I
Sbjct: 122 EDGTFDVLPKKEVSLLTKEMDKLQKFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
P V +VD+N +P I +P NDD AI+ AI++GK+
Sbjct: 182 PVVAMVDTNTDPTPIDVIIPSNDDAIRAIRLIAGAMADAIIEGKQG 227
>gi|373857318|ref|ZP_09600060.1| ribosomal protein S2 [Bacillus sp. 1NLA3E]
gi|372452968|gb|EHP26437.1| ribosomal protein S2 [Bacillus sp. 1NLA3E]
Length = 232
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 43/232 (18%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +MK YI+ R G I DL ++ + + +A NFV +A
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKELA 61
Query: 125 YRDGIVLFVG--QSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI 182
G +LFVG + AQ+S+ ++ A+ F + R W G TN E + + ++RL D+
Sbjct: 62 GNGGKILFVGTKKQAQDSVR-DEAARSGMYFVNQR-WLGGTLTNFETIQKRISRLKDIER 119
Query: 183 LTNTLTTVLEPNP---------------------------------------AIGEAAKM 203
++ T + P A+ EA K+
Sbjct: 120 MSEDGTFEVLPKKEVVQLRKQQERLEKFLGGIKDMKGLPDALFIIDPRKERIAVAEAHKL 179
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
IP VGIVD+NC+P+ I Y +P NDD A++ AIL+ K+ ++ T
Sbjct: 180 NIPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEAKQGEEVT 231
>gi|336450594|ref|ZP_08621041.1| ribosomal protein S2 [Idiomarina sp. A28L]
gi|336282417|gb|EGN75649.1| ribosomal protein S2 [Idiomarina sp. A28L]
Length = 247
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 103/223 (46%), Gaps = 39/223 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+ + + AL+F+ H A
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKIHIINLESTVPMFNKALDFLQHTASN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G VLFVG + I+ A +F W GM TN + + +++ RL DL +
Sbjct: 64 GGKVLFVGTKRAAAEQIKNAAIASNQFYVNHRWLGGMLTNWKTVRQSIKRLKDLEVQSQD 123
Query: 183 -----------LTNT---------------------LTTVLEPNP---AIGEAAKMCIPT 207
L NT + V++ + AI EA + IP
Sbjct: 124 GTFEKLTKKEALMNTREMEKLEKSLGGIKNMGGLPDVIFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
V +VD+N +P+ + Y +PGNDD AIQ Y T I +G++
Sbjct: 184 VAVVDTNSSPDGVDYVIPGNDDAMRAIQCYLGAAATTINEGRQ 226
>gi|300724795|ref|YP_003714120.1| 30S ribosomal protein S2 [Xenorhabdus nematophila ATCC 19061]
gi|297631337|emb|CBJ92032.1| 30S ribosomal subunit protein S2 [Xenorhabdus nematophila ATCC
19061]
Length = 241
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + AL + IA R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNGALAELNKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S I+ A C ++ W GM TN + + +++ RL DL +
Sbjct: 64 KGKILFVGTKRAASEAIKDAALSCDQYFVNHRWLGGMLTNWKTVRQSIKRLKDLEVQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDAEHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A++ Y TA+ +G+
Sbjct: 184 FAIVDTNSDPDGVDFIIPGNDDAIRAVKLYLTAVATAVREGR 225
>gi|260426326|ref|ZP_05780305.1| ribosomal protein S2 [Citreicella sp. SE45]
gi|260420818|gb|EEX14069.1| ribosomal protein S2 [Citreicella sp. SE45]
Length = 255
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 46/229 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM +IYG R G I DL Q+ +L AL + + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMGEFIYGARNGIHILDLTQTVPMLDAALKAIRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR------------ 176
VLFVG Q + I + A+ C ++ W G TN + + +++ R
Sbjct: 68 RVLFVGTKRQAAAPIAEAAEKCAQYYMNHRWLGGTLTNWQTVSQSIARLKSIDEQMDTGA 127
Query: 177 ------------------------------LPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
LPD++ + + V + AI EA K+ IP
Sbjct: 128 EGLTKKERLGMERDQQKLQASLGGIREMGGLPDMLFVID----VKKEQLAIAEAKKLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V IVD+NC+P+ + Y +PGNDD AI YC + A L G + +
Sbjct: 184 VVAIVDTNCSPDGVDYIIPGNDDAARAISLYCDLVSRAALDGMTGQMEA 232
>gi|153810141|ref|ZP_01962809.1| hypothetical protein RUMOBE_00522 [Ruminococcus obeum ATCC 29174]
gi|149833320|gb|EDM88401.1| ribosomal protein S2 [Ruminococcus obeum ATCC 29174]
Length = 256
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 39/229 (17%)
Query: 62 QVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVA 121
Q+ +++ +K + +A VH GH+ + +M PYIY R G I DL QS ++ DA N VA
Sbjct: 13 QIMSVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQQSVGMVDDAYNAVA 72
Query: 122 HIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL---- 177
I G +LFVG Q I+ A+ C +F W GM TN + + + RL
Sbjct: 73 DIVANGGNILFVGTKKQAQDAIKAEAERCGQFYVNERWLGGMLTNFKTIQSRIARLKQIE 132
Query: 178 --------------------PDLVILTNTLTTVLE----PNP-----------AIGEAAK 202
+L L L + E P+ + EA
Sbjct: 133 AMEADGTFEVLPKKEVIELRKELAKLQKNLGGIKEMKRLPDAIFIVDPKKERICVQEAHT 192
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+ IP +GI D+NC+P + Y +PGNDD A++ A+++ +
Sbjct: 193 LGIPLIGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEANQG 241
>gi|56419784|ref|YP_147102.1| 30S ribosomal protein S2 [Geobacillus kaustophilus HTA426]
gi|61215361|sp|Q5L0K2.1|RS2_GEOKA RecName: Full=30S ribosomal protein S2
gi|56379626|dbj|BAD75534.1| 30S ribosomal protein S2 [Geobacillus kaustophilus HTA426]
Length = 235
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 41/229 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +MK YI+ R G I DL ++ + + +A NFV +A
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVRELA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------ 166
G +LFVG Q +++ A+ C F + W G TN
Sbjct: 62 ANGGKILFVGTKKQAQESVKEEAERCDMFYVNQRWLGGTLTNFATIQKRIKRLREIEKME 121
Query: 167 -------------------SEKLFRAVTRLPDLVILTNTLTTVLEPNP---AIGEAAKMC 204
E+L + + + D+ L + L V++P A+ EA K+
Sbjct: 122 EDGIFDVLPKKEVIRLKKEKERLEKFLGGIKDMKELPDAL-FVIDPRKERIAVAEARKLN 180
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
IP +GIVD+NC+P+ I Y +P NDD A++ A+L+ K+ ++
Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAKQGEE 229
>gi|270264820|ref|ZP_06193084.1| 30S ribosomal protein S2 [Serratia odorifera 4Rx13]
gi|333928809|ref|YP_004502388.1| 30S ribosomal protein S2 [Serratia sp. AS12]
gi|333933762|ref|YP_004507340.1| 30S ribosomal protein S2 [Serratia plymuthica AS9]
gi|386330632|ref|YP_006026802.1| 30S ribosomal protein S2 [Serratia sp. AS13]
gi|386823783|ref|ZP_10110925.1| 30S ribosomal protein S2 [Serratia plymuthica PRI-2C]
gi|421785181|ref|ZP_16221613.1| ribosomal protein S2 [Serratia plymuthica A30]
gi|270041118|gb|EFA14218.1| 30S ribosomal protein S2 [Serratia odorifera 4Rx13]
gi|333475369|gb|AEF47079.1| ribosomal protein S2 [Serratia plymuthica AS9]
gi|333492869|gb|AEF52031.1| ribosomal protein S2 [Serratia sp. AS12]
gi|333962965|gb|AEG29738.1| ribosomal protein S2 [Serratia sp. AS13]
gi|386379323|gb|EIJ20118.1| 30S ribosomal protein S2 [Serratia plymuthica PRI-2C]
gi|407752596|gb|EKF62747.1| ribosomal protein S2 [Serratia plymuthica A30]
Length = 241
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + AL + I+ R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMANAALAELTKISSR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A +C +F W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASEAVKEYANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELAKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD AI+ Y A+ +G+
Sbjct: 184 FSIVDTNSDPDGVDFIIPGNDDAIRAIKLYLTAVAAAVREGR 225
>gi|294635118|ref|ZP_06713629.1| ribosomal protein S2 [Edwardsiella tarda ATCC 23685]
gi|451965798|ref|ZP_21919054.1| 30S ribosomal protein S2 [Edwardsiella tarda NBRC 105688]
gi|291091495|gb|EFE24056.1| ribosomal protein S2 [Edwardsiella tarda ATCC 23685]
gi|451315370|dbj|GAC64416.1| 30S ribosomal protein S2 [Edwardsiella tarda NBRC 105688]
Length = 241
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL ++ IA R
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S ++ A +C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVKDAALNCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A+ Y A+ +G+
Sbjct: 184 FSIVDTNSDPDGVDFVIPGNDDAIRAVTLYLSAVAEAVREGR 225
>gi|269138093|ref|YP_003294793.1| 30S ribosomal protein S2 [Edwardsiella tarda EIB202]
gi|387866824|ref|YP_005698293.1| 30S ribosomal protein S2 [Edwardsiella tarda FL6-60]
gi|267983753|gb|ACY83582.1| 30S ribosomal protein S2 [Edwardsiella tarda EIB202]
gi|304558137|gb|ADM40801.1| SSU ribosomal protein S2p (SAe) [Edwardsiella tarda FL6-60]
Length = 236
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 39/220 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++DM A VH GH+ + +MKP+I+G R I +L+++ + DAL ++ IA R G
Sbjct: 1 MRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNDALAELSKIASRKG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI------ 182
+LFVG S ++ A +C +F W GM TN + + +++ RL DL
Sbjct: 61 KILFVGTKRAASEAVKDAALNCDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGT 120
Query: 183 ------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPTVG 209
L N+L + + P+ AI EA + IP
Sbjct: 121 FDKLTKKEALMRTRELGKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFS 180
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A+ Y A+ +G+
Sbjct: 181 IVDTNSDPDGVDFVIPGNDDAIRAVTLYLSAVAEAVREGR 220
>gi|253578261|ref|ZP_04855533.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850579|gb|EES78537.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 247
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 101/230 (43%), Gaps = 39/230 (16%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +M PYIY R G I DL QS ++ DA N +A I
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMAPYIYTERNGIYIIDLQQSVGMVDDAYNAIADIV 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
G +LFVG Q I+ A+ C +F W GM TN + + + RL ++
Sbjct: 62 ADGGSILFVGTKKQAQDAIKTEAERCGQFYVNERWLGGMLTNFKTIQSRIARLKEIEAME 121
Query: 181 -------------VILTNTLTT-------------------VLEPNP---AIGEAAKMCI 205
+ L L +++P + EA + I
Sbjct: 122 ADGTFDVLPKKEVIELKKELAKLQKNIGGIKEMKRLPDAIFIVDPKKERICVQEAHTLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
P +GI D+NC+P + Y +PGNDD A++ A+++ K+ D
Sbjct: 182 PLIGICDTNCDPEELDYVIPGNDDAIRAVKLIVSKMADAVIEAKQGTADA 231
>gi|406915583|gb|EKD54651.1| hypothetical protein ACD_60C00060G0019 [uncultured bacterium]
Length = 259
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 39/239 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +M YI+G R I +L+++ ++ DALNF+ IA +
Sbjct: 5 VTMRDMLKAGVHFGHQTCHWNPKMAAYIFGARNKIHIINLEKTVPMMSDALNFIGGIASK 64
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNT 186
G +LFVG +++ A C W GM TN + + +++ RL +L +
Sbjct: 65 KGKILFVGTKPAAQEILKAEAIRCHMPYVNHRWLGGMLTNYKTIRQSIRRLKELEAMFEK 124
Query: 187 LT----------------TVLE------------PNP-----------AIGEAAKMCIPT 207
+ T LE P+ A+ EA ++ IP
Sbjct: 125 SSFGRLTKKEILNLTRDKTKLERSLGGIKNMGGLPDALFVIDVGHEKIAVAEANRLSIPV 184
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEVQ 266
+GIVD+N NP + Y +PGNDD+ +IQ Y + IL + + + E E++
Sbjct: 185 IGIVDTNNNPAGVDYVIPGNDDSLRSIQLYTKAVADCILDARASNPEIAAAEDELVEIE 243
>gi|254229485|ref|ZP_04922899.1| ribosomal protein S2 [Vibrio sp. Ex25]
gi|151937950|gb|EDN56794.1| ribosomal protein S2 [Vibrio sp. Ex25]
Length = 253
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 43/237 (18%)
Query: 52 PNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAE 111
PNP+ + F++ V ++DM A VH GH+ + +MKP+I+G R I +L+++
Sbjct: 4 PNPI---EEFKMAT-VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVP 59
Query: 112 LLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLF 171
+ DAL +A + + G VLFVG S +++ A +F W GM TN + +
Sbjct: 60 MFNDALAELAKVGEKKGKVLFVGTKRAASEAVKEAAIASNQFYVNNRWLGGMLTNYKTVR 119
Query: 172 RAVTRLPDLVI------------------------LTNTLTTVLE----PNP-------- 195
+++ RL DL L +L + + P+
Sbjct: 120 QSIKRLKDLETQSQDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADH 179
Query: 196 ---AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
AI EA + IP +VD+N NP+ + Y +PGNDD A+Q Y +A+ +G+
Sbjct: 180 EHIAIKEANNLGIPVYAVVDTNSNPDGVDYVIPGNDDAIRAVQLYLNAAASAVSEGR 236
>gi|258406061|ref|YP_003198803.1| 30S ribosomal protein S2 [Desulfohalobium retbaense DSM 5692]
gi|257798288|gb|ACV69225.1| ribosomal protein S2 [Desulfohalobium retbaense DSM 5692]
Length = 262
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 41/236 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+K+K M + VH GH+ + +M+P+I+G R+G I DL Q+ +L R A + +
Sbjct: 4 IKMKQMLETGVHFGHQTRRWNPKMRPFIFGARKGIHIIDLQQTVQLFRQAHDVIVDAVAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN- 185
G ++FVG Q + + AQ C F T W G TN + + + RL L +
Sbjct: 64 GGKIIFVGTKRQAQEAVAEDAQRCGMFYVTNRWLGGTLTNFQTIKHRIERLKHLETMFED 123
Query: 186 -----------------------------------TLTTVLEPNP---AIGEAAKMCIPT 207
+ V++P AI E K+ IP
Sbjct: 124 GSIHRFPKKEIAGMQRELDKLQAALGGIKDMEDLPQVAFVIDPKREELAIREFRKLGIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG--KKAKQDTLKLLSE 261
V + D+NC+P+ + Y +PGNDD AI+ + A L+G ++ +Q T + L+E
Sbjct: 184 VAVTDTNCDPDQVDYVIPGNDDAIRAIKLFVSSVADACLEGLARRDEQPTEEQLTE 239
>gi|293394701|ref|ZP_06638993.1| 30S ribosomal protein S2 [Serratia odorifera DSM 4582]
gi|291422827|gb|EFE96064.1| 30S ribosomal protein S2 [Serratia odorifera DSM 4582]
Length = 241
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL + I+ R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKISSR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A +C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A+ Y A+ +G+
Sbjct: 184 FSIVDTNSDPDGVDFIIPGNDDAIRAVNLYLTAVAAAVREGR 225
>gi|332982471|ref|YP_004463912.1| 30S ribosomal protein S2P [Mahella australiensis 50-1 BON]
gi|332700149|gb|AEE97090.1| SSU ribosomal protein S2P [Mahella australiensis 50-1 BON]
Length = 277
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 103/228 (45%), Gaps = 39/228 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + +A VH GH+ + +M PYI+ R G I DL ++ + L A F+ +A
Sbjct: 2 SVVSMKQLLEAGVHFGHQTRRWNPKMAPYIFTERNGIYIIDLQKTVKNLDVAYKFIKEVA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
+LFVG Q IE+ A+ C + W GM TN + + + V RL +L
Sbjct: 62 ESGQDILFVGTKKQAQEAIEEEAKRCGMHYVNQRWLGGMLTNFKTIRQRVQRLTELENME 121
Query: 181 ------------VILTNTLTTVLEPN-----------------------PAIGEAAKMCI 205
VI LE N A+ EA + I
Sbjct: 122 QDGTFDMLPKKEVIKLRLEKEKLEKNLSGIKNMRSLPGAMYVVDPRKEHIAVSEARILGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P V IVD+NC+P+ + Y +PGNDD AI+ Q+ A+L+ ++ +Q
Sbjct: 182 PIVAIVDTNCDPDEVDYVIPGNDDAIRAIKLISQLIADAVLEARQGEQ 229
>gi|308270376|emb|CBX26988.1| 30S ribosomal protein S2 [uncultured Desulfobacterium sp.]
Length = 288
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 104/234 (44%), Gaps = 41/234 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K++ +A VH GH+ + +MK YI+G R G I DL ++ + + A +F+
Sbjct: 6 MKELLEAGVHFGHQTKRWNPKMKQYIFGARNGIYIIDLQKTVRMFKSAYDFIQDTVANGK 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEF-AHTRFWRQGMFTNSEKLFRAVTRLPDLVILTNTL 187
VLFVG Q I + A C+ F H R W GM TN + + + + RL L + N
Sbjct: 66 SVLFVGTKKQAKEAIYEEANRCEMFYVHNR-WLGGMLTNFQTIKQGIDRLNYLNSIQNDG 124
Query: 188 TTVLEPNP---------------------------------------AIGEAAKMCIPTV 208
+ L P AI E ++ IP V
Sbjct: 125 SINLFPKKERLKHEKERKKLDSTLGGIRIMNALPGAIFIVDPKHEAIAIREGKRLRIPIV 184
Query: 209 GIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
IVD+NC+P+ + Y +PGNDD +I+ TA ++GKK ++ + S+K
Sbjct: 185 SIVDTNCDPDDVDYIIPGNDDAIRSIRLISSRIATACIEGKKRLEEKKQAESDK 238
>gi|146310371|ref|YP_001175445.1| 30S ribosomal protein S2 [Enterobacter sp. 638]
gi|167011235|sp|A4W6R4.1|RS2_ENT38 RecName: Full=30S ribosomal protein S2
gi|145317247|gb|ABP59394.1| SSU ribosomal protein S2P [Enterobacter sp. 638]
Length = 241
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL ++ I+ R
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELSKISSR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S ++ A +C +F W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASEAVKDAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELAKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A+ Y + +G+
Sbjct: 184 FAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGR 225
>gi|24373197|ref|NP_717240.1| 30S ribosomal protein S2 RpsB [Shewanella oneidensis MR-1]
gi|113970976|ref|YP_734769.1| 30S ribosomal protein S2 [Shewanella sp. MR-4]
gi|114048200|ref|YP_738750.1| 30S ribosomal protein S2 [Shewanella sp. MR-7]
gi|117921256|ref|YP_870448.1| 30S ribosomal protein S2 [Shewanella sp. ANA-3]
gi|38258373|sp|Q8EGH5.1|RS2_SHEON RecName: Full=30S ribosomal protein S2
gi|122944527|sp|Q0HT62.1|RS2_SHESR RecName: Full=30S ribosomal protein S2
gi|123130243|sp|Q0HGV5.1|RS2_SHESM RecName: Full=30S ribosomal protein S2
gi|166226755|sp|A0KZ23.1|RS2_SHESA RecName: Full=30S ribosomal protein S2
gi|24347418|gb|AAN54684.1| 30S ribosomal protein S2 RpsB [Shewanella oneidensis MR-1]
gi|113885660|gb|ABI39712.1| SSU ribosomal protein S2P [Shewanella sp. MR-4]
gi|113889642|gb|ABI43693.1| SSU ribosomal protein S2P [Shewanella sp. MR-7]
gi|117613588|gb|ABK49042.1| SSU ribosomal protein S2P [Shewanella sp. ANA-3]
Length = 242
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 45/233 (19%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R G I +L+ + + +AL F++++A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G VLFVG I++ A C ++ W GM TN + + +++ RL +L
Sbjct: 64 KGKVLFVGTKRAAGEAIKEAAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQSVD 123
Query: 181 -----------VILTNTLTTVLEP----------------------NPAIGEAAKMCIPT 207
++ T L + + + AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK------KAKQD 254
V +VD+N P+ + Y VPGNDD AI+ Y A G+ +A+QD
Sbjct: 184 VAVVDTNSAPDGVNYIVPGNDDAMRAIRLYTTSVAAAANAGRGQDLAVQAEQD 236
>gi|376294804|ref|YP_005166034.1| 30S ribosomal protein S2 [Desulfovibrio desulfuricans ND132]
gi|323457365|gb|EGB13230.1| ribosomal protein S2 [Desulfovibrio desulfuricans ND132]
Length = 263
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 39/227 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K M + VH GH+ + +M+PYI+G R G I DL Q+ ++ A +F+ +
Sbjct: 4 VTMKQMLETGVHFGHQTRRWNPKMRPYIFGARNGIHIMDLQQTVKMFATAHDFIVDTVAK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G VLF+G Q ++ A+ + T W G TN + + +++ RL L
Sbjct: 64 GGKVLFIGTKRQAQESVKAEAERSGMYYVTHRWMGGTLTNFQTIKKSIDRLKSLEQMFED 123
Query: 183 ------------------------------LTNTLTTVLEPNP-----AIGEAAKMCIPT 207
+T V +P AI E K+ IP
Sbjct: 124 GSISRYTKKEAVGMNREVKKLNLALGGIKDMTEAPQAVFVIDPKREQIAIQECRKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
V +VDSNC+P+++ Y +PGNDD AI+ + A L+G ++D
Sbjct: 184 VAVVDSNCDPDMVDYIIPGNDDAIRAIKLFATHMADACLEGGAMQKD 230
>gi|290968864|ref|ZP_06560401.1| ribosomal protein S2 [Megasphaera genomosp. type_1 str. 28L]
gi|335048932|ref|ZP_08541944.1| ribosomal protein S2 [Megasphaera sp. UPII 199-6]
gi|290781160|gb|EFD93751.1| ribosomal protein S2 [Megasphaera genomosp. type_1 str. 28L]
gi|333764715|gb|EGL42101.1| ribosomal protein S2 [Megasphaera sp. UPII 199-6]
Length = 244
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 39/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +MK +I+ R G I DL ++ + +A NF +
Sbjct: 3 VVSMKQLLEAGVHFGHQTRRWNPKMKRFIFTERNGIYIIDLQKTVKKTEEAYNFARDLVA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL-------- 177
G +LFVG Q I+ A+ C F W GM TN + + + V RL
Sbjct: 63 DGGKILFVGTKKQAQESIKNEAERCNMFYINERWLGGMLTNFQTIEKRVKRLKLLEKQAE 122
Query: 178 ---------PDLVILTNTLTT-------------------VLEPNP---AIGEAAKMCIP 206
++ IL + + +++P A+ EA K+ IP
Sbjct: 123 DGTFDVLPKKEVTILKHEMEKLHKYLGGIKEMKKLPDALFIIDPKKEEIAVAEARKLHIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+ VD+NC+P+LI +P+P NDD A++ A+L+G + +Q
Sbjct: 183 IIATVDTNCDPDLIDFPIPANDDAIRAVKLLSGKIADAVLEGNQGEQ 229
>gi|114321014|ref|YP_742697.1| 30S ribosomal protein S2 [Alkalilimnicola ehrlichii MLHE-1]
gi|122311392|sp|Q0A7I0.1|RS2_ALHEH RecName: Full=30S ribosomal protein S2
gi|114227408|gb|ABI57207.1| SSU ribosomal protein S2P [Alkalilimnicola ehrlichii MLHE-1]
Length = 248
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 100/224 (44%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM +A VH GH+ + +M PYI+G R I +L+++ L ++A+N+V +A
Sbjct: 4 VSMRDMLEAGVHFGHQTRYWNPKMAPYIFGQRNKIHIINLEKTLPLYQEAMNYVGRLAAE 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G VLFVG + + A C W GM TN + ++ RL DL
Sbjct: 64 GGKVLFVGTKRSARKAVREEASRCGMPYVDHRWLGGMLTNFRTVKGSIRRLKDLEAQAED 123
Query: 183 --------------------LTNTLTTVLEPNP---------------AIGEAAKMCIPT 207
L TL+ + + N A+ EA K+ IP
Sbjct: 124 GTFDKLTKREALSLSREMEKLNRTLSGIKDMNGLPDAMFVIDVGFEHIAVQEARKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V +VD+N +P + Y +PGNDD AIQ Y A+L+ K A
Sbjct: 184 VAVVDTNNSPREVDYVIPGNDDAIRAIQLYLSGAADAVLEAKTA 227
>gi|449019889|dbj|BAM83291.1| mitochondrial ribosomal protein S2, mitochondrial precursor
[Cyanidioschyzon merolae strain 10D]
Length = 224
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 99/189 (52%), Gaps = 10/189 (5%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + A VH+GHK + + +M+PYIYG R G I DL QSA L+ AL V A R G
Sbjct: 8 LRQLLSAGVHIGHKTSAWNPKMRPYIYGERNGMHIVDLQQSAVCLKRALE-VFRAAGRAG 66
Query: 129 IV-LFVG-QSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---SEKLFRAVTRLPDLVIL 183
+ L++G + ++ A+ F + W G TN S ++ R LPDL+
Sbjct: 67 LRQLWLGPKDPFLESIVRTRARQAGAFTLSGRWVGGTLTNPVASRQILRLGGHLPDLIFC 126
Query: 184 TNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKT 243
+ A+ EA + IP++ ++D++C+P+ TY VPGND++ AI YC +
Sbjct: 127 VDAH----RHRTALREARIVDIPSIAVIDTDCDPDWATYIVPGNDESARAIDLYCALAVQ 182
Query: 244 AILKGKKAK 252
A L G + +
Sbjct: 183 ATLDGLRER 191
>gi|260424723|ref|ZP_05733065.2| ribosomal protein S2 [Dialister invisus DSM 15470]
gi|260402954|gb|EEW96501.1| ribosomal protein S2 [Dialister invisus DSM 15470]
Length = 246
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 39/227 (17%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K + +A VH GH+ + +M YI+ R G I DL ++ + + +A F+ +A
Sbjct: 1 MKQLLEAGVHFGHQTRRWNPKMARYIFTERNGIYIIDLQKTVKKVEEAYAFIREVAATGA 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL-------- 180
+LFVG Q + + AQ C F W GM TN + V RL +L
Sbjct: 61 PILFVGTKKQAQNSVREEAQRCNMFYVNERWLGGMLTNFRTIQARVARLKELEKMFEDGT 120
Query: 181 --------VILTNTLTTVLEPN-----------------------PAIGEAAKMCIPTVG 209
VIL L+ N A+ EA K+ IP V
Sbjct: 121 TEQYPKKEVILMQRELEKLQKNLGGIKDMKKIPGAIFVIDSKKEEIAVAEAHKLHIPVVA 180
Query: 210 IVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTL 256
VD+NC+P+++ +P+P NDD A++ AIL+G++ +Q+ +
Sbjct: 181 TVDTNCDPDVVDFPIPANDDAIRAVRLLASKMADAILEGRQGQQEEV 227
>gi|300812589|ref|ZP_07093006.1| ribosomal protein S2 [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300496462|gb|EFK31567.1| ribosomal protein S2 [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 253
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + +A VH GH+ D +MKPYI+ R G I DL ++ ++L DA N+V +A
Sbjct: 2 SVVSMKQLLEAGVHFGHQTRRWDPKMKPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAVA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
DG+ LFVG Q I + A ++ + W G TN + V RL DL
Sbjct: 62 QDDGVFLFVGTKKQAQEAIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKDLKKMA 121
Query: 181 -------------VILTNTLTT-------------------VLEPNP---AIGEAAKMCI 205
+LT + V++P A+ EA K+ I
Sbjct: 122 EDGTFDVLPKKEVSLLTKEMDKLQKFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
P V +VD+N +P I +P NDD AI+ A+++GK+
Sbjct: 182 PVVAMVDTNTDPTPIDVIIPSNDDAIRAIRLIAGTMADAVIEGKQG 227
>gi|296136579|ref|YP_003643821.1| 30S ribosomal protein S2 [Thiomonas intermedia K12]
gi|410694282|ref|YP_003624904.1| 30S ribosomal protein S2 [Thiomonas sp. 3As]
gi|294340707|emb|CAZ89099.1| 30S ribosomal protein S2 [Thiomonas sp. 3As]
gi|295796701|gb|ADG31491.1| ribosomal protein S2 [Thiomonas intermedia K12]
Length = 252
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 40/238 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M PYIYG R I +L+++ + +A F +A R
Sbjct: 3 VSMRQMLEAGVHFGHQTRFWNPKMAPYIYGHRNKIHIVNLEKTLPMYLEAAKFARQLAAR 62
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
G +LFVG Q ++ + A+ C + W GM TN
Sbjct: 63 RGTILFVGTKRQAGEIVREQAERCGMPYVDQRWLGGMLTNFKTVKTSIKKLKDMQAQAAE 122
Query: 167 -----------------SEKLFRAVTRLPDLVILTNTL--TTVLEPNPAIGEAAKMCIPT 207
+KL +++ + D+ L + + V AI EA + IP
Sbjct: 123 GVLEQMSKKEALTFQREMDKLEKSIGGIQDMAALPDAIFVIDVGYHKIAIAEAKTLGIPV 182
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK-AKQDTLKLLSEKQE 264
+G+VD+N +P +T+ +PGNDD+ A+ Y Q AIL+GK A + ++ +SE +E
Sbjct: 183 IGVVDTNHSPLGVTHIIPGNDDSAKAVMLYAQGMADAILEGKNDAVNEVVQAVSEGEE 240
>gi|378824524|ref|YP_005089694.1| rps2 gene product (chloroplast) [Synedra acus]
gi|371572723|gb|AEX37819.1| ribosomal protein S2 (chloroplast) [Synedra acus]
Length = 231
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 96/226 (42%), Gaps = 47/226 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ + + +A VH GHK + +M PYIY I DL QSA LL +A N++ +A
Sbjct: 4 ISLSQLLEAGVHFGHKSYRWNPKMFPYIYSEVNNIHILDLVQSASLLNEATNYLNKLASE 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR---------- 176
LF+G Q S LI + A+ C + W GM TN L + R
Sbjct: 64 GKTFLFIGTKRQASTLIAQEAKRCNSYYVNYRWLGGMLTNWSTLKERINRLKSLEQQEAD 123
Query: 177 ---------------------------------LPDLVILTNTLTTVLEPNPAIGEAAKM 203
LPD+ I+ + + AI E K+
Sbjct: 124 NTFDLLTKKEASLRRKELDKLRNHLDGIKDMQQLPDVAIIIDQKREM----TAIRECRKL 179
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IP V I+D+NC+P+L+ P+PGNDD +I+ + +I+ GK
Sbjct: 180 GIPIVSILDTNCDPDLVDIPIPGNDDAVRSIKLILKTLTDSIINGK 225
>gi|313124041|ref|YP_004034300.1| 30S ribosomal protein s2 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312280604|gb|ADQ61323.1| 30S ribosomal protein S2 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 253
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + +A VH GH+ D +MKPYI+ R G I DL ++ ++L DA N+V +A
Sbjct: 2 SVVSMKQLLEAGVHFGHQTRRWDPKMKPYIFTQRNGIYIIDLQKTIKMLDDAYNYVKAVA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL---- 180
DG+ LFVG Q I + A ++ + W G TN + V RL DL
Sbjct: 62 QDDGVFLFVGTKKQAQEAIAEEATRAGQYYVNQRWLGGTLTNWTTIQSRVKRLKDLKKMA 121
Query: 181 -------------VILTNTLTT-------------------VLEPNP---AIGEAAKMCI 205
+LT + V++P A+ EA K+ I
Sbjct: 122 EDGTFDVLPKKEVSLLTKEMDKLQKFLGGIEDMPRIPDVMFVVDPKKEKIAVHEANKLGI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
P V +VD+N +P I +P NDD AI+ A+++GK+
Sbjct: 182 PVVAMVDTNTDPTPIDVIIPSNDDAIRAIRLIAGAMADAVIEGKQG 227
>gi|375308255|ref|ZP_09773541.1| 30S ribosomal protein S2 [Paenibacillus sp. Aloe-11]
gi|390454040|ref|ZP_10239568.1| 30S ribosomal protein S2 [Paenibacillus peoriae KCTC 3763]
gi|375079679|gb|EHS57901.1| 30S ribosomal protein S2 [Paenibacillus sp. Aloe-11]
Length = 232
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 39/229 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M YI+ R G I DL ++ + + +A NFV IA
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMDRYIFTERNGIYIIDLQKTVKKVEEAYNFVKSIAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
+G +LFVG Q +++ A+ +F + W G TN + + + + RL L
Sbjct: 63 ENGTILFVGTKKQAQDSVKEEAERAGQFYINQRWLGGTLTNFQTIQKRIDRLKQLESWEE 122
Query: 181 ------------VILTN-------------------TLTTVLEPNP---AIGEAAKMCIP 206
+IL + +++P A+ EA K+ IP
Sbjct: 123 DGTFAVLPKKEVIILRKEKDRLEKFLGGIKNMKGLPSALFIIDPRKERIAVAEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
VGIVD+NC+P+ I Y +PGNDD A++ A+++ + ++ T
Sbjct: 183 IVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTGKMADAVMEANQGEETT 231
>gi|146328956|ref|YP_001209631.1| 30S ribosomal protein S2 [Dichelobacter nodosus VCS1703A]
gi|166225268|sp|A5EV13.1|RS2_DICNV RecName: Full=30S ribosomal protein S2
gi|146232426|gb|ABQ13404.1| ribosomal protein S2 [Dichelobacter nodosus VCS1703A]
Length = 267
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 102/229 (44%), Gaps = 49/229 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++D+F+A H GH+ + +M PYIYG R I +L+Q+ +L DALNF++ +
Sbjct: 4 VSMRDLFEAGAHFGHRARFWNPKMAPYIYGKRGDIHIINLEQTVPMLNDALNFLSAVVGN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRF-WRQGMFTN------------------- 166
G V+FVG S I + A C + F W GM TN
Sbjct: 64 GGRVMFVGTKRSASDAISEAASRCG-MPYVNFRWLGGMMTNFKTIRQSIRRLEEIEKMAE 122
Query: 167 ------------------SEKLFRAVT------RLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL RA+T LPD++ + + V AI EA K
Sbjct: 123 DGTYDKLSKKEVIVLEREREKLARALTGIRSMKHLPDVLFVVD----VGHERIAIQEAMK 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
+ IP VG+VD+N + + Y +PGNDD+ AI+ Y I K A
Sbjct: 179 LGIPVVGVVDTNNDIEGVDYIIPGNDDSVRAIRLYVNAAADTIEHAKAA 227
>gi|330838367|ref|YP_004412947.1| 30S ribosomal protein S2 [Selenomonas sputigena ATCC 35185]
gi|329746131|gb|AEB99487.1| ribosomal protein S2 [Selenomonas sputigena ATCC 35185]
Length = 240
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 39/226 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M YI+ R G I DL ++ + +A NF+ +A
Sbjct: 3 VVSMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVRKVDEAYNFLRSLAE 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
VLFVG Q +++ A + F W GM TN + + + + RL DL
Sbjct: 63 EGKSVLFVGTKKQAQDAVKEEATKAEMFYVNERWLGGMLTNYQTIQKRIRRLKDLERMEE 122
Query: 181 ------------VILTNTLTT-------------------VLEPNP---AIGEAAKMCIP 206
+ L + +T V++P A+ EA K+ IP
Sbjct: 123 DGTFDVLTKKEVLQLRHEMTKLEKFLGGIKEMNRLPGALFVVDPRKERIAVAEAKKLNIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V IVD+NC+P+ I Y +PGNDD A++ +AI++G++ +
Sbjct: 183 IVAIVDTNCDPDEIDYVIPGNDDAIRAVRLLTSAMASAIVEGRQGQ 228
>gi|302038066|ref|YP_003798388.1| 30S ribosomal protein S2 [Candidatus Nitrospira defluvii]
gi|300606130|emb|CBK42463.1| 30S ribosomal protein S2 [Candidatus Nitrospira defluvii]
Length = 257
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 39/223 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+V +K++ +A VH GH+ + +MK +++G R G I DL Q+ E + A F
Sbjct: 2 GVVAIKELLEAGVHFGHQTNRWNPKMKRFLFGERNGVYIIDLQQTVERMELAYAFARDTV 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL------- 177
VLFVG Q + ++E+ A+ +F + W GM TN + + R++ ++
Sbjct: 62 AAGDSVLFVGTKRQAAEILEEEAKRANQFYINQRWLGGMLTNFQTIRRSIDKMKKMETTL 121
Query: 178 -----------------PDLVILTNTLTTV--LEPNP-------------AIGEAAKMCI 205
++V L L+ + + P AI EA+++ I
Sbjct: 122 ADPTHQGHTKKELGQMQKEVVKLQKNLSGIRNMRALPGAVFILDTRIEHIAILEASRLEI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
P + IVDSNC+P+ I YP+PGNDD +I+ A L+G
Sbjct: 182 PVIAIVDSNCDPDHIQYPIPGNDDAIRSIKLIISRIADACLEG 224
>gi|315121996|ref|YP_004062485.1| 30S ribosomal protein S2 [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495398|gb|ADR51997.1| 30S ribosomal protein S2 [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 289
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 46/222 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + ++ V GH+ + +MKPYI+ R I DL Q+ +L AL V+ R G
Sbjct: 8 MQQLLESGVQFGHRKFLWNPKMKPYIFCERSNTHIIDLSQTVPMLHKALQVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
+LFV Q S ++ + A+ ++ W GM TN
Sbjct: 68 RILFVATKPQASNVVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLDELLSKEN 127
Query: 167 --------------SEKLFRAV------TRLPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
+KL RA+ LPDL+ + +T L AI EA ++ IP
Sbjct: 128 QDFTKKERLNIERRRDKLKRALDGIRDMGGLPDLMFIIDTNREKL----AIEEARRLRIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
V +VDSNCNP+LI Y +PGNDD+ +I +C + +A + G
Sbjct: 184 IVAVVDSNCNPDLIDYIIPGNDDSARSIALFCDLVASAAIDG 225
>gi|238759949|ref|ZP_04621103.1| 30S ribosomal protein S2 [Yersinia aldovae ATCC 35236]
gi|238701856|gb|EEP94419.1| 30S ribosomal protein S2 [Yersinia aldovae ATCC 35236]
Length = 241
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + AL + I+ R
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGSRNKVHIINLEKTVPMFNQALAELTKISSR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S +++ A + +F W GM TN + + +++ RL DL I
Sbjct: 64 KGKILFVGTKRAASEAVKEAAHNSDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELTKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A++ Y TA+ +G+
Sbjct: 184 FSIVDTNSDPDGVDFIIPGNDDAIRAVKLYLNAVATAVREGR 225
>gi|207092621|ref|ZP_03240408.1| 30S ribosomal protein S2 [Helicobacter pylori HPKX_438_AG0C1]
Length = 264
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 47/234 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +KD+ + VH GH+ + + K +I+GVR+ I DL ++ R N V +
Sbjct: 1 MVTMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIYIIDLQKTLRYFRYTYNIVRDASA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+ ++FVG Q + +++ A+ Q W GM TN
Sbjct: 61 QGKSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEMEN 120
Query: 167 ---------SEKLF---------------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + ++PD++ + + V + A+ EA K
Sbjct: 121 SGQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVID----VAKEKIAVAEARK 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTL 256
+ IP V +D+NC+P+L+ YP+PGNDD +I+ +C+ AIL+G++ Q+ +
Sbjct: 177 LHIPIVAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEGRELMQEEI 230
>gi|332654217|ref|ZP_08419961.1| ribosomal protein S2 [Ruminococcaceae bacterium D16]
gi|332517303|gb|EGJ46908.1| ribosomal protein S2 [Ruminococcaceae bacterium D16]
Length = 240
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 99/229 (43%), Gaps = 39/229 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M YIY R G I DL ++ + L +A NFV +
Sbjct: 3 VVSMKQLLEAGVHFGHQTRRWNPKMATYIYTERNGIYIIDLQKTVKKLEEAYNFVRELGE 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTR--------- 176
+ +LFVG Q I++ A + W GM TN + + V R
Sbjct: 63 KGETLLFVGTKKQAQEAIKEEASRVGMYWVNARWLGGMLTNFKTMRGRVDRLNQLKKMQE 122
Query: 177 ---------------LPDLVILTNTLTTVLE---------------PNPAIGEAAKMCIP 206
L ++ L L V E AI EA K+ IP
Sbjct: 123 DGTFDMLPKKEVMKHLGEIAKLEKYLGGVTEMKKLPGALFVVDPRKERNAINEARKLHIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V IVD+NC+P+ I Y +PGNDD AI+ V AI +GK+ K +
Sbjct: 183 IVAIVDTNCDPDEIDYVIPGNDDAIRAIKLISSVMANAIQEGKQGKDEA 231
>gi|87199390|ref|YP_496647.1| 30S ribosomal protein S2 [Novosphingobium aromaticivorans DSM
12444]
gi|123763562|sp|Q2G8L0.1|RS2_NOVAD RecName: Full=30S ribosomal protein S2
gi|87135071|gb|ABD25813.1| SSU ribosomal protein S2P [Novosphingobium aromaticivorans DSM
12444]
Length = 251
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 99/227 (43%), Gaps = 46/227 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V + + +A H GH+ + RMKPYI+G R G I DL Q+ L+ AL F++
Sbjct: 5 VVTMHQLIEAGAHFGHQTHRWNPRMKPYIFGARNGIHILDLSQTVPLMARALEFISATVQ 64
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------SEKLFRA------ 173
G VLFVG Q I + A+ + W GM TN S K F+A
Sbjct: 65 AGGKVLFVGTKRQAQEPIAQAARASGQHYVNHRWLGGMLTNWKTISGSIKRFKALEEQLA 124
Query: 174 -------------VTR-----------------LPDLVILTNTLTTVLEPNPAIGEAAKM 203
+TR +PD++ + + L AI EA +
Sbjct: 125 GDTAGLTKKEVLQLTRERDKFELSLGGIRDMGGIPDVMFVIDANKEEL----AIKEANVL 180
Query: 204 CIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
IP V I+DSN +P I +P+P NDD AI+ YC+ A KG +
Sbjct: 181 GIPVVAILDSNVSPEGIAFPIPANDDASRAIRLYCEAVAAAATKGGR 227
>gi|297530576|ref|YP_003671851.1| 30S ribosomal protein S2 [Geobacillus sp. C56-T3]
gi|319766264|ref|YP_004131765.1| 30S ribosomal protein S2 [Geobacillus sp. Y412MC52]
gi|375008221|ref|YP_004981854.1| 30S ribosomal protein S2 [Geobacillus thermoleovorans CCB_US3_UF5]
gi|448237405|ref|YP_007401463.1| 30S ribosomal protein S2 [Geobacillus sp. GHH01]
gi|297253828|gb|ADI27274.1| ribosomal protein S2 [Geobacillus sp. C56-T3]
gi|317111130|gb|ADU93622.1| ribosomal protein S2 [Geobacillus sp. Y412MC52]
gi|359287070|gb|AEV18754.1| 30S ribosomal protein S2 [Geobacillus thermoleovorans CCB_US3_UF5]
gi|445206247|gb|AGE21712.1| 30S ribosomal protein S2 [Geobacillus sp. GHH01]
Length = 235
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 41/229 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +MK YI+ R G I DL ++ + + +A NFV +A
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVRELA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------ 166
G +LFVG Q +++ A+ C F + W G TN
Sbjct: 62 ANGGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLREIEKME 121
Query: 167 -------------------SEKLFRAVTRLPDLVILTNTLTTVLEPNP---AIGEAAKMC 204
E+L + + + D+ L + L V++P A+ EA K+
Sbjct: 122 EDGIFDVLPKKEVIRLKKEKERLEKFLGGIKDMKELPDAL-FVIDPRKERIAVAEARKLN 180
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
IP +GIVD+NC+P+ I Y +P NDD A++ A+L+ K+ ++
Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAKQGEE 229
>gi|431805387|ref|YP_007232288.1| 30S ribosomal protein S2 [Liberibacter crescens BT-1]
gi|430799362|gb|AGA64033.1| SSU ribosomal protein S2p (SAe) [Liberibacter crescens BT-1]
Length = 255
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 102/227 (44%), Gaps = 46/227 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + + V GH + +M+ YI+G R I DL Q+ +L +AL V+ R G
Sbjct: 8 MRQLLENGVQFGHMSCLWNPKMESYIFGERNNIHIIDLSQTVPMLHNALKVVSDTVARGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
VL+VG Q + +I ++A+ ++ W GM TN
Sbjct: 68 RVLYVGTKRQAADIIAQSAKRSAQYYVNSRWLGGMMTNWKTVSNSIQRLRKLDEIISKEA 127
Query: 167 -----SEKL---------------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCIP 206
E+L R + LPDL+ + +T L AI EA ++ IP
Sbjct: 128 QGLTKKERLNLDRKRNKLEKALGGIRDIGALPDLMFIIDTNRERL----AIEEARRLKIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
V +VD+N NP+ I YP+PGNDD+ +I YC + A++ G +Q
Sbjct: 184 IVAVVDTNSNPDFIDYPIPGNDDSSRSIALYCDLISRAVIDGIARQQ 230
>gi|393718747|ref|ZP_10338674.1| 30S ribosomal protein S2 [Sphingomonas echinoides ATCC 14820]
Length = 280
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 106/239 (44%), Gaps = 46/239 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++ + + H GH+ + +MKPYI+G R G I DL Q+ L AL FVA
Sbjct: 5 VVSMQQLLETGAHFGHQTHRWNPKMKPYIFGDRNGVHILDLSQTVPLFARALEFVAASTA 64
Query: 126 RDGIVLFVGQSAQ-NSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL----PDL 180
G VLFVG Q + E + Q F + R W GM TN + + ++ RL L
Sbjct: 65 AGGKVLFVGTKRQAQEPVAEAARRSGQHFVNHR-WLGGMLTNWKTISGSIKRLKTLEEQL 123
Query: 181 VILTNTLTT-------------------------------VLEPNP---AIGEAAKMCIP 206
T+ LT V++ N AI EA + IP
Sbjct: 124 SGDTHGLTKKEVLQLTRERDKLELSLGGIRDMGGIPDVMFVIDANKEELAIKEANTLGIP 183
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQEV 265
V I+DSN +P+ I +PVP NDD AI+ YC+ A +G + LS +Q++
Sbjct: 184 VVAILDSNVSPDGIAFPVPANDDASRAIRLYCEAIAIAATRGGNEQ------LSRRQDI 236
>gi|421860616|ref|ZP_16292722.1| ribosomal protein S2 [Paenibacillus popilliae ATCC 14706]
gi|410829802|dbj|GAC43159.1| ribosomal protein S2 [Paenibacillus popilliae ATCC 14706]
Length = 232
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 39/227 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M YI+ R G I DL ++ + + +A NFV +A
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMDKYIFTERNGIYIIDLQKTVKKVEEAYNFVKSLAA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
+G +LFVG Q +++ A+ C + + W G TN + + + + RL L
Sbjct: 63 ENGTILFVGTKKQAQDSVKEEAERCGMYYINQRWLGGTLTNFQTIQKRIDRLKQLEAMEQ 122
Query: 181 -----------VILTNTLTTVLEP------------------NP-----AIGEAAKMCIP 206
VIL LE +P A+ EA K+ IP
Sbjct: 123 DGTFEVLPKKEVILLRKEQERLEKFLGGIKNMKGLPSALFIIDPRKERIAVAEARKLGIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
VGIVD+NC+P+ I Y +PGNDD A++ AI++ + ++
Sbjct: 183 IVGIVDTNCDPDEIDYVIPGNDDAIRAVKLLTSKMADAIVEAHQGEE 229
>gi|378787287|gb|AFC39918.1| ribosomal protein S2 [Porphyra umbilicalis]
Length = 241
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 105/236 (44%), Gaps = 47/236 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V + ++ +A VH GH+ + +M PYIY R G I DL Q+A+LL +A +F+ +
Sbjct: 3 VVTLAELLEAGVHFGHQARRWNPKMFPYIYTERNGIHIIDLVQTAQLLTEACDFIKQASS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVT---------- 175
VLF+G Q + ++ + AQ C + + W GM TN + VT
Sbjct: 63 DGKKVLFLGTKRQAAGIVAQEAQRCDSYYVNQRWLGGMLTNWVTIKSRVTRLRQLEEQDS 122
Query: 176 ---------------------------------RLPDLVILTNTLTTVLEPNPAIGEAAK 202
RLPD+V++ + AI E K
Sbjct: 123 SGIIDQLPKKEAAVLRRELDKLRKHLNGIKNMNRLPDIVVVVDQ----KRETTAIQECLK 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL 258
+ IPT+ I+D+NC+P +I P+P NDD +I+ AI +GK + + +L
Sbjct: 179 LGIPTICILDTNCSPEIINIPIPANDDAIRSIKLIIGKIADAIYEGKYGQMEPTEL 234
>gi|222824093|ref|YP_002575667.1| 30S ribosomal protein S2 [Campylobacter lari RM2100]
gi|254764464|sp|B9KCX7.1|RS2_CAMLR RecName: Full=30S ribosomal protein S2
gi|222539315|gb|ACM64416.1| 30S ribosomal protein S2 [Campylobacter lari RM2100]
Length = 261
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 47/231 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G + DL ++ R N V A
Sbjct: 1 MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL-------- 177
+LFVG Q I++ A+ C W GM TN + +++ +L
Sbjct: 61 EGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEE 120
Query: 178 -----------------------------------PDLVILTNTLTTVLEPNPAIGEAAK 202
PD++ + +T+ + A+ EA +
Sbjct: 121 DGSIKLLTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKI----AVQEANR 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+ IP V +D+NC+P+L+ +P+PGNDD ++Q +CQ AI +GK ++
Sbjct: 177 LKIPVVAPLDTNCDPDLVDFPIPGNDDAIRSVQLFCQEMAEAINEGKALRE 227
>gi|319892271|ref|YP_004149146.1| 30S ribosomal protein S2p (SAe) [Staphylococcus pseudintermedius
HKU10-03]
gi|386319461|ref|YP_006015624.1| 30S ribosomal protein S2 [Staphylococcus pseudintermedius ED99]
gi|317161967|gb|ADV05510.1| SSU ribosomal protein S2p (SAe) [Staphylococcus pseudintermedius
HKU10-03]
gi|323464632|gb|ADX76785.1| ribosomal protein S2 [Staphylococcus pseudintermedius ED99]
Length = 265
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 39/225 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +MK YI+ R G I DL ++ + + +A NFV ++
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVKQVSE 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILTN 185
G VLFVG Q ++ A+ + + W G+ TN + + + V R+ ++ +
Sbjct: 63 EGGKVLFVGTKKQAQESVKAEAERAGHYYVNQRWLGGILTNYKTISKRVQRISEIEKMEE 122
Query: 186 TLT------------------------------------TVLEPNP---AIGEAAKMCIP 206
T V++P AI EA K+ IP
Sbjct: 123 DGTFDVLPKKEVVELKKEYDRLIKFLGGIREMKSMPQALFVVDPRKERNAIAEARKLNIP 182
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
VGIVD+NC+P+ I Y +P NDD A++ AIL+G++
Sbjct: 183 IVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTGKMADAILEGQQG 227
>gi|242620028|ref|YP_003002032.1| 30S ribosomal protein S2 [Aureococcus anophagefferens]
gi|239997273|gb|ACS36796.1| 30S ribosomal protein S2 [Aureococcus anophagefferens]
Length = 226
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 105/226 (46%), Gaps = 46/226 (20%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+K+ + A VH GHK + +M PYIY R G I DL Q+++LL++A +FV A +
Sbjct: 4 IKIAQLLKAGVHFGHKTPRWNPKMFPYIYMERNGIHILDLVQTSQLLQEACDFVQLAAEQ 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN-------------------- 166
LFVG Q + LI++ A F W G+ TN
Sbjct: 64 GKTFLFVGTKPQAAELIKEEALRADSFYINHRWYGGLLTNWQTVKGRIQTLHTLEAQEET 123
Query: 167 ---------SEKLFRAVTRL-------------PDLVILTNTLTTVLEPNPAIGEAAKMC 204
S L + +T+L PD++I+ + + A+ EA K+
Sbjct: 124 IFPTLPKKESASLRKELTKLRSQLNGVKNMSGVPDIMIVIDQNYEL----TAVREAIKLN 179
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
IP + I+DSNC+P+LI P+PGNDD S+I+ + +I G++
Sbjct: 180 IPIISILDSNCDPDLIDIPIPGNDDAISSIKIILEALTDSIRLGRQ 225
>gi|269926625|ref|YP_003323248.1| 30S ribosomal protein S2 [Thermobaculum terrenum ATCC BAA-798]
gi|269790285|gb|ACZ42426.1| ribosomal protein S2 [Thermobaculum terrenum ATCC BAA-798]
Length = 289
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 39/228 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
N++ +K + +A VH GH+ + +MKPYI+ R G I DL Q+ L +A +FVA
Sbjct: 3 NVINMKALLEAGVHFGHQAKRWNPKMKPYIFTERNGIHIIDLAQTVRALNEAYDFVADTV 62
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------ 166
G VLFVG Q I + A +F + W GM TN
Sbjct: 63 ANGGTVLFVGTKKQAQDAIAEEATRAGQFYVNQRWMGGMLTNFVTIKSRLRTMEELERRK 122
Query: 167 ------------SEKLFRAVTRLPDLVILTNTLTT------VLEPNP---AIGEAAKMCI 205
+ KL R + RL ++ + + V++P A+ EA ++ I
Sbjct: 123 LEGDFDRLPKKEALKLERELERLNKMLGGLRGMDSLPSIVYVVDPRKEYIAVSEANRLGI 182
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
P V +VD+NC+P++I + +P NDD A++ A L+G+ ++
Sbjct: 183 PVVAMVDTNCDPDVIDWVIPANDDAIRAVRLITSKIADAALEGRMRRE 230
>gi|392551132|ref|ZP_10298269.1| 30S ribosomal protein S2 [Pseudoalteromonas spongiae UST010723-006]
Length = 242
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 39/224 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ L +A++F+ +A
Sbjct: 4 VSMRDMLQAGVHFGHQARYWNPKMKPFIFGARNRVHIINLEKTVPLFNEAMSFLKGVASN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G +LFVG S +++ A +F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVKEAALRSDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 181 -----------VILTNTLTTVLE-----------PNP-----------AIGEAAKMCIPT 207
++LT + + + P+ AI EA + IP
Sbjct: 124 GTFEKLTKKEALMLTREMEKLEKSLGGIKNMGGLPDAIFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
V +VD+N NP+ + + +PGNDD AIQ Y ++G+++
Sbjct: 184 VSVVDTNSNPDGVDFIIPGNDDAIRAIQLYTNAVADVAVEGRES 227
>gi|258545338|ref|ZP_05705572.1| 30S ribosomal protein S2 [Cardiobacterium hominis ATCC 15826]
gi|258519441|gb|EEV88300.1| 30S ribosomal protein S2 [Cardiobacterium hominis ATCC 15826]
Length = 259
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 104/227 (45%), Gaps = 49/227 (21%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++++F+A H GH+ + +M PYIYG R I +L+++ +L DALNFV +
Sbjct: 4 VSMRELFEAGAHFGHRTRFWNPKMAPYIYGKRGDIHIINLEKTVPMLNDALNFVGTVVAN 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRF-WRQGMFTN------------------- 166
G V+FVG S + + A C + F W GM TN
Sbjct: 64 GGSVMFVGTKRSASEAVGEAAARCG-MPYVNFRWLGGMMTNFKTIRQSINRLEAIERMAE 122
Query: 167 ------------------SEKLFRAVT------RLPDLVILTNTLTTVLEPNPAIGEAAK 202
+KL R++T RLPD++ + + V + AI EA K
Sbjct: 123 DGTFQKLVKKEVIVLGRERDKLARSLTGIRNMRRLPDVLFVID----VGHEHIAIQEAKK 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+ IP VG+VD+N + Y +PGNDD+ AI+ Y +AI + K
Sbjct: 179 LGIPVVGVVDTNSQLEGVDYIIPGNDDSVRAIRLYVDAVASAIEEAK 225
>gi|350566746|ref|ZP_08935389.1| 30S ribosomal protein S2 [Peptoniphilus indolicus ATCC 29427]
gi|348661736|gb|EGY78414.1| 30S ribosomal protein S2 [Peptoniphilus indolicus ATCC 29427]
Length = 256
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 47/230 (20%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K++ +A VH GH+ + +M +I+ R G I DL ++ + + +A F+ I+ G
Sbjct: 1 MKNLLEAGVHFGHQTRRWNPKMARFIFTQRNGIYIIDLQKTVKKINEAYEFIREISADGG 60
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN---------------------- 166
+LFVG Q IEK A+ C+ + W G+ TN
Sbjct: 61 TILFVGTKKQAQDAIEKEAKRCEMPFINQRWLGGLLTNYQTIRKRIDRLHRIEEMEEDGT 120
Query: 167 ---------------SEKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAKMCI 205
EKL + + R+PD + + + + A+ EA + I
Sbjct: 121 FEALPKKEVIQIRHEGEKLEKFLGGIKDMGRIPDAIFVVDPRKERI----AVKEAHILGI 176
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
P +GI+D+NC+P+ I +P+PGNDD A++ + A+L+GK+ Q+
Sbjct: 177 PVIGIIDTNCDPDEIDFPIPGNDDAIRAVKLITETMANAVLEGKQGTQNV 226
>gi|407695751|ref|YP_006820539.1| 30S ribosomal protein S2 [Alcanivorax dieselolei B5]
gi|407253089|gb|AFT70196.1| 30S ribosomal protein S2 [Alcanivorax dieselolei B5]
Length = 253
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 104/228 (45%), Gaps = 39/228 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+ + L +A+ F+ +A
Sbjct: 4 VTMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKIHIVNLESTLPLFNEAIGFLNKLAAS 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
+ VLFVG I + A C W GM TN + + +++ RL DL
Sbjct: 64 NNKVLFVGTKRAAQKAIREEATRCGMPYVDHRWLGGMLTNWKTIRQSIKRLRDLEAQSED 123
Query: 183 --------------------LTNTLTTVLE---------------PNPAIGEAAKMCIPT 207
L ++ + E + A+ EA K+ IP
Sbjct: 124 GTLAKLTKKEALMRHREMEKLERSIGGIKEMGGLPDALFVIDVDHEDIAVQEARKLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
V +VD+N +P+ I Y +PGNDD AIQ Y Q AIL+GK+ +++
Sbjct: 184 VAVVDTNSDPDDIDYVIPGNDDAIRAIQLYVQAAADAILEGKEYAKNS 231
>gi|260888307|ref|ZP_05899570.1| ribosomal protein S2 [Selenomonas sputigena ATCC 35185]
gi|260861843|gb|EEX76343.1| ribosomal protein S2 [Selenomonas sputigena ATCC 35185]
Length = 253
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 39/226 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M YI+ R G I DL ++ + +A NF+ +A
Sbjct: 16 VVSMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIYIIDLQKTVRKVDEAYNFLRSLAE 75
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL----- 180
VLFVG Q +++ A + F W GM TN + + + + RL DL
Sbjct: 76 EGKSVLFVGTKKQAQDAVKEEATKAEMFYVNERWLGGMLTNYQTIQKRIRRLKDLERMEE 135
Query: 181 ------------VILTNTLTT-------------------VLEPNP---AIGEAAKMCIP 206
+ L + +T V++P A+ EA K+ IP
Sbjct: 136 DGTFDVLTKKEVLQLRHEMTKLEKFLGGIKEMNRLPGALFVVDPRKERIAVAEAKKLNIP 195
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
V IVD+NC+P+ I Y +PGNDD A++ +AI++G++ +
Sbjct: 196 IVAIVDTNCDPDEIDYVIPGNDDAIRAVRLLTSAMASAIVEGRQGQ 241
>gi|365846692|ref|ZP_09387194.1| ribosomal protein S2 [Yokenella regensburgei ATCC 43003]
gi|364573824|gb|EHM51311.1| ribosomal protein S2 [Yokenella regensburgei ATCC 43003]
Length = 241
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL + IA R
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +LFVG S ++ A C +F W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEAVKDAANSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
IVD+N +P+ + + +PGNDD A+ Y T + +G+
Sbjct: 184 FAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVATTVREGR 225
>gi|350288234|gb|EGZ69470.1| hypothetical protein NEUTE2DRAFT_159933 [Neurospora tetrasperma FGSC
2509]
Length = 1132
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 96/208 (46%), Gaps = 25/208 (12%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
++D+ A+ H+GH + YIYGVRQG I L+ +A LR A V +AYR
Sbjct: 862 ASLEDLMAAQAHMGHNTSLWNPANARYIYGVRQGIHIISLETTATHLRRAARVVEEVAYR 921
Query: 127 DGIVLFVG-QSAQNSLLIEKT--AQDCQEFAHTRFWRQGMFTNSEKLFRAV--------- 174
G++LFVG + Q +++ A+ C F WR G TN E+L V
Sbjct: 922 GGLILFVGTRPGQRPIVVRAAELAKACHLFTK---WRPGTITNREQLLGGVPLTVVDELD 978
Query: 175 -------TRLPDLVILTNTLTTVLEPNPAIG---EAAKMCIPTVGIVDSNCNPNLITYPV 224
L D L L L P + E + IPT+GI+D+N NP+ +TY +
Sbjct: 979 RPLSGFEDHLHDRRPLAPDLVVCLNPKENMTLLYECSLAKIPTIGIIDTNTNPSWVTYQI 1038
Query: 225 PGNDDTPSAIQYYCQVFKTAILKGKKAK 252
P NDD+ A V A +G+K +
Sbjct: 1039 PANDDSLRATALISGVLGRAGERGQKRR 1066
>gi|300715396|ref|YP_003740199.1| 30S ribosomal protein S2 [Erwinia billingiae Eb661]
gi|299061232|emb|CAX58341.1| 30S ribosomal protein S2 [Erwinia billingiae Eb661]
Length = 241
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 41/235 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL + IA R
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI---- 182
G +L VG S ++++A C +F W GM TN + + +++ RL DL I
Sbjct: 64 KGKILIVGTKRAASESVKESALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQD 123
Query: 183 --------------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPT 207
L N+L + + P+ AI EA + IP
Sbjct: 124 GTFDKLTKKEALMRTRELAKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPV 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
IVD+N +P+ + + +PGNDD A+ Y T + +G+ QD + EK
Sbjct: 184 FAIVDTNSDPDGVDFIIPGNDDAIRAVSLYLTAVATTVREGR--SQDLAQQAEEK 236
>gi|420663671|ref|ZP_15149719.1| ribosomal protein S2 [Yersinia pestis PY-42]
gi|391543996|gb|EIR94261.1| ribosomal protein S2 [Yersinia pestis PY-42]
Length = 233
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 39/217 (17%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
M A VH GH+ + +MKP+I+G R I +L+++ + +AL + I+ R G +L
Sbjct: 1 MLQAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELTKISSRKGKIL 60
Query: 132 FVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVI--------- 182
FVG S +++ A +C +F W GM TN + + +++ RL DL I
Sbjct: 61 FVGTKRAASEAVKEAANNCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLEIQSQDGTFDK 120
Query: 183 ---------------LTNTLTTVLE----PNP-----------AIGEAAKMCIPTVGIVD 212
L N+L + + P+ AI EA + IP IVD
Sbjct: 121 LTKKEALMRTRELNKLENSLGGIKDMGGLPDALFVVDADHEHIAIKEANNLGIPVFSIVD 180
Query: 213 SNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+N +P+ + + +PGNDD A++ Y TA+ +G+
Sbjct: 181 TNSDPDGVDFIIPGNDDAIRAVKLYLGAVATAVREGR 217
>gi|253999120|ref|YP_003051183.1| 30S ribosomal protein S2 [Methylovorus glucosetrophus SIP3-4]
gi|253985799|gb|ACT50656.1| ribosomal protein S2 [Methylovorus glucosetrophus SIP3-4]
Length = 249
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 43/224 (19%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A VH GH+ + +M P+I+G R I +L+++ L DAL +V +A
Sbjct: 3 VTMRQMLEAGVHFGHQTRYWNPKMAPFIFGDRNKIHIVNLEKTLPLFEDALKYVRQLAAN 62
Query: 127 DGIVLFVGQSAQNSLLIEKTAQ--DCQEFAHTRFWRQGMFTN------------------ 166
G +LFVG Q ++++ A+ +C H W GM TN
Sbjct: 63 KGRILFVGTKRQARDIMKEEAERANCAYVNHR--WLGGMLTNFKTVKQSIKRLNDYETML 120
Query: 167 -------------------SEKLFRAVTRLPDLVILTNT--LTTVLEPNPAIGEAAKMCI 205
EKL R++ + ++ L + + V + A+ EAAK+ I
Sbjct: 121 QDGSLDKFGKKEALGYKREVEKLQRSIGGIKEMGGLPDAIFIVDVGHESGAVTEAAKLGI 180
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
P +G+VD+N +P+ + Y +PGNDD+ AI+ Y + A+L+G+
Sbjct: 181 PVIGVVDTNNSPDGVAYVIPGNDDSSRAIRLYARGIADAVLEGR 224
>gi|433463485|ref|ZP_20421038.1| 30S ribosomal protein S2 [Halobacillus sp. BAB-2008]
gi|432187485|gb|ELK44770.1| 30S ribosomal protein S2 [Halobacillus sp. BAB-2008]
Length = 245
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 39/226 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +MK YI+ R G I DL ++ + + +A N+V +A
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNYVKEVA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
G +LFVG Q + A C + + W G TN E + + + RL D+ +
Sbjct: 62 ADGGNILFVGTKKQAQDTVRDEATRCGMYYINQRWLGGTLTNFETIRKRIYRLKDIERME 121
Query: 185 NTLT------------------------------------TVLEPNP---AIGEAAKMCI 205
T V++P AI EA K+ I
Sbjct: 122 EDGTFDVLPKKEVVDMLKEKDRLVKFLGGIKEMKSLPDAMFVIDPRKERIAIAEAHKLNI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
P VGIVD+NC+P+ I Y +P NDD A++ A+L+ K+
Sbjct: 182 PVVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKMADAVLEAKQG 227
>gi|196247608|ref|ZP_03146310.1| ribosomal protein S2 [Geobacillus sp. G11MC16]
gi|196212392|gb|EDY07149.1| ribosomal protein S2 [Geobacillus sp. G11MC16]
Length = 235
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 41/229 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +MK YI+ R G I DL ++ + + +A NFV +A
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVRELA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------ 166
G +LFVG Q +++ A+ C F + W G TN
Sbjct: 62 GNGGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLREIEKME 121
Query: 167 -------------------SEKLFRAVTRLPDLVILTNTLTTVLEPNP---AIGEAAKMC 204
E+L + + + D+ L + L V++P A+ EA K+
Sbjct: 122 EDGVFDVLPKKEVIGLKKEKERLEKFLGGIKDMKELPDAL-FVIDPRKERIAVAEARKLN 180
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
IP +GIVD+NC+P+ I Y +P NDD A++ A+L+ K+ ++
Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAKQGEE 229
>gi|298529661|ref|ZP_07017064.1| ribosomal protein S2 [Desulfonatronospira thiodismutans ASO3-1]
gi|298511097|gb|EFI35000.1| ribosomal protein S2 [Desulfonatronospira thiodismutans ASO3-1]
Length = 264
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 101/227 (44%), Gaps = 39/227 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V +K M + VH GH+ + +MKPYI+G R+G I DL Q+ +L + A +F++
Sbjct: 4 VTMKQMLETGVHFGHQTKRWNPKMKPYIFGSRKGIHIIDLQQTVKLYQYAHDFISDTVAG 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVIL--- 183
VLFVG Q +I AQ F T W G TN + + +++ RL L +
Sbjct: 64 GKKVLFVGTKRQAREVINTEAQRADMFYVTNRWLGGTLTNFQTIRKSIERLKTLERMFED 123
Query: 184 -----------------TNTLTT----------------VLEPNP---AIGEAAKMCIPT 207
N L +++P AI E K+ IP
Sbjct: 124 GSVHRFVKKEVAMMQREVNKLNADLGGIKDMDSLPGAAFIIDPKKEEIAIKECRKLNIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
+VD+NC+P+LI + +PGNDD AI+ + A L+G + D
Sbjct: 184 AAVVDTNCDPDLIDFVIPGNDDAIRAIKLFAGSMADACLEGMAKRGD 230
>gi|90994440|ref|YP_536930.1| ribosomal protein S2 [Pyropia yezoensis]
gi|122232143|sp|Q1XDN8.1|RR2_PORYE RecName: Full=30S ribosomal protein S2, chloroplastic
gi|90819004|dbj|BAE92373.1| 30S ribosomal protein S2 [Pyropia yezoensis]
Length = 242
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 103/232 (44%), Gaps = 47/232 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V + ++ +A VH GH+ + +M PYIY R G I DL Q+A+LL +A + +
Sbjct: 3 IVTLAELLEAGVHFGHQARRWNPKMFPYIYTERNGIHIIDLVQTAQLLTEACELIKQASS 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNS------------------ 167
VLF+G Q + ++ + AQ C + + W GM TN
Sbjct: 63 DGKKVLFLGTKRQAAGIVAQEAQRCDSYYVNQRWLGGMLTNWVTIKSRVSRLRQLEEQDK 122
Query: 168 -------------------EKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
+KL + +TRLPD+V++ + AI E K
Sbjct: 123 SGMIDQLPKKEAAVLRRELDKLRKHLNGIKNMTRLPDIVVVVDQ----KRETTAIQECLK 178
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQD 254
+ IPT+ I+D+NC+P +I P+P NDD +I+ AI GK + D
Sbjct: 179 LGIPTICILDTNCSPEIINIPIPANDDAIRSIKLIVGKIADAIYDGKYGQTD 230
>gi|337288565|ref|YP_004628037.1| 30S ribosomal protein S2 [Thermodesulfobacterium sp. OPB45]
gi|334902303|gb|AEH23109.1| ribosomal protein S2 [Thermodesulfobacterium geofontis OPF15]
Length = 281
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 39/236 (16%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K + +A VH GH+ + +MKP+I+G R G I DL Q+ A FV ++ +
Sbjct: 4 ITMKQLLEAGVHFGHQTRRWNPKMKPFIFGERNGIHIIDLQQTLHYFEIAYEFVVNLVAQ 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLV----- 181
G +LFVG Q +++ A+ C + W G TN + ++V +L L
Sbjct: 64 GGKILFVGTKKQAQETVKEEAERCGMYYVVNRWLGGTLTNFRTIRQSVEKLKKLETWFED 123
Query: 182 -----------ILTNTLTTVLEPN-----------------------PAIGEAAKMCIPT 207
+ L LE N A+ EA K+ IP
Sbjct: 124 GTIERFTKKERLRLERLKNKLEKNLAGIKNMETLPQALYIVDPVHEEIAVKEARKLGIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQ 263
+ IVD+NC+P+LI Y +PGNDD AI+ A L+G + ++ + ++K+
Sbjct: 184 IAIVDTNCDPDLIDYIIPGNDDAIRAIKLITSKIADACLEGLEIYKERIAAQTDKE 239
>gi|427392487|ref|ZP_18886492.1| 30S ribosomal protein S2 [Alloiococcus otitis ATCC 51267]
gi|425731448|gb|EKU94266.1| 30S ribosomal protein S2 [Alloiococcus otitis ATCC 51267]
Length = 254
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 39/226 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
++V +K + ++ VH GH+ + +MKPYI+ R G I DL Q+ ++ DA NF+ IA
Sbjct: 2 SVVTMKQLLESGVHFGHQTRRWNPKMKPYIFTERNGIYIIDLQQTVNMIDDAYNFIRDIA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDLVILT 184
G VLFVG Q I++ A+ F W G TN + + + + RL +L +
Sbjct: 62 ADGGNVLFVGTKKQAQESIKEEAERVGAFYVNNRWLGGTLTNWDTISKRIDRLKELEEME 121
Query: 185 NTLTTVLEPNPAIG---------------------------------------EAAKMCI 205
T + P +G EA K+ I
Sbjct: 122 EDGTFEVLPKKEVGILIKEREKLQYNLGGIKDMPGLPDAIFVVDPRKEDIAVKEARKLNI 181
Query: 206 PTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
P V +VD+NC+P+ I +P NDD A++ + A ++GK+
Sbjct: 182 PIVAMVDTNCDPDEIDVIIPSNDDAIRAVKLITKTMADAFVEGKQG 227
>gi|15646161|ref|NP_208345.1| 30S ribosomal protein S2 [Helicobacter pylori 26695]
gi|410024795|ref|YP_006894048.1| 30S ribosomal protein S2 [Helicobacter pylori Rif1]
gi|410502559|ref|YP_006937086.1| 30S ribosomal protein S2 [Helicobacter pylori Rif2]
gi|410683078|ref|YP_006935480.1| 30S ribosomal protein S2 [Helicobacter pylori 26695]
gi|419416254|ref|ZP_13956827.1| 30S ribosomal protein S2 [Helicobacter pylori P79]
gi|2500388|sp|P56009.1|RS2_HELPY RecName: Full=30S ribosomal protein S2
gi|2314737|gb|AAD08594.1| ribosomal protein S2 (rps2) [Helicobacter pylori 26695]
gi|384375540|gb|EIE30819.1| 30S ribosomal protein S2 [Helicobacter pylori P79]
gi|409894719|gb|AFV42777.1| 30S ribosomal protein S2 [Helicobacter pylori 26695]
gi|409896452|gb|AFV44374.1| 30S ribosomal protein S2 [Helicobacter pylori Rif1]
gi|409898110|gb|AFV45964.1| 30S ribosomal protein S2 [Helicobacter pylori Rif2]
Length = 264
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 111/242 (45%), Gaps = 47/242 (19%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +KD+ + VH GH+ + + K +I+GVR+ I DL ++ R N V +
Sbjct: 1 MVTMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+ ++FVG Q + +++ A+ Q W GM TN
Sbjct: 61 QGKSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEMEN 120
Query: 167 ---------SEKLF---------------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + ++PD++ + + V + A+ EA K
Sbjct: 121 SGQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVID----VAKEKIAVAEARK 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEK 262
+ IP V +D+NC+P+L+ YP+PGNDD +I+ +C+ AIL+G++ Q+ + +E
Sbjct: 177 LHIPIVAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEGRELMQEEIVHANEN 236
Query: 263 QE 264
E
Sbjct: 237 SE 238
>gi|138894769|ref|YP_001125222.1| 30S ribosomal protein S2 [Geobacillus thermodenitrificans NG80-2]
gi|166225274|sp|A4IMC3.1|RS2_GEOTN RecName: Full=30S ribosomal protein S2
gi|134266282|gb|ABO66477.1| Ribosomal protein S2 [Geobacillus thermodenitrificans NG80-2]
Length = 235
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 41/229 (17%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +MK YI+ R G I DL ++ + + +A NFV +A
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVEEAYNFVRELA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------ 166
G +LFVG Q +++ A+ C F + W G TN
Sbjct: 62 GNGGKILFVGTKKQAQESVKEEAERCGMFYVNQRWLGGTLTNFATIQKRIKRLREIEKME 121
Query: 167 -------------------SEKLFRAVTRLPDLVILTNTLTTVLEPNP---AIGEAAKMC 204
E+L + + + D+ L + L V++P A+ EA K+
Sbjct: 122 EDGVFDVLPKKEVIGLKKEKERLEKFLGGIKDMKELPDAL-FVIDPRKERIAVAEARKLN 180
Query: 205 IPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
IP +GIVD+NC+P+ I Y +P NDD A++ A+L+ K+ ++
Sbjct: 181 IPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTSKIADAVLEAKQGEE 229
>gi|418021357|ref|ZP_12660461.1| ribosomal protein S2, bacterial type [Candidatus Regiella
insecticola R5.15]
gi|347603289|gb|EGY28150.1| ribosomal protein S2, bacterial type [Candidatus Regiella
insecticola R5.15]
Length = 242
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 103/221 (46%), Gaps = 39/221 (17%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ M +A H GH+ + M PYI+G R I +L+++ + +AL + I+ R
Sbjct: 4 VSMRKMLEAGAHYGHQTRYWNPEMGPYIFGKRNKVHIINLEKTVPMFNEALAELKKISAR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL------ 180
G +LFVG S I+KTA+DC+++ W GM TN + + +++ RL DL
Sbjct: 64 KGKILFVGTKRAASEPIKKTAEDCKQYFVNHRWLGGMLTNWKTVRQSIKRLKDLESQSQD 123
Query: 181 -----------VILTNTLTT-------------------VLEPNP---AIGEAAKMCIPT 207
++ T L+ V++ N AI EA + IP
Sbjct: 124 GTFEKLTKKEVLMRTRELSNLEKSLGGIKDMGGLPDALFVVDANHEHIAIKEANNLGIPI 183
Query: 208 VGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG 248
IVD+N +P I + +PGNDD AI Y + AI +G
Sbjct: 184 FSIVDTNSSPKGIDFIIPGNDDAIRAINLYLEAVAAAIHEG 224
>gi|421720875|ref|ZP_16160152.1| ribosomal protein S2 [Helicobacter pylori R055a]
gi|407225659|gb|EKE95429.1| ribosomal protein S2 [Helicobacter pylori R055a]
Length = 264
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 47/234 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +KD+ + VH GH+ + + K +I+GVR+ I DL ++ R N V +
Sbjct: 1 MVTMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
+ ++FVG Q + +++ A+ Q W GM TN
Sbjct: 61 QGKSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEMEN 120
Query: 167 ---------SEKLF---------------RAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
EKL R + ++PD++ + + V + A+ EA K
Sbjct: 121 SGQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVID----VAKEKIAVAEARK 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTL 256
+ IP V +D+NC+P+L+ YP+PGNDD +I+ +C+ AIL+G++ Q+ +
Sbjct: 177 LHIPIVAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEGRELMQEEI 230
>gi|365840025|ref|ZP_09381239.1| ribosomal protein S2 [Anaeroglobus geminatus F0357]
gi|364562764|gb|EHM40596.1| ribosomal protein S2 [Anaeroglobus geminatus F0357]
Length = 263
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 39/226 (17%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + +A VH GH+ + +M +I+ R G I DL ++ + + +A NF +A
Sbjct: 15 VVSMKQLLEAGVHFGHQTRRWNPKMARFIFTERNGIYIIDLQKTVKKMDEAYNFARDLAA 74
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL-------- 177
G +LFVG Q I+ A+ C F W GM TN + + + V RL
Sbjct: 75 EGGKILFVGTKKQAQECIKNEAERCGMFFVNERWLGGMLTNFQTIEKRVRRLKALEKQAE 134
Query: 178 ---------PDLVILTNTLTT-------------------VLEPNP---AIGEAAKMCIP 206
++ +L + + +++P A+ EA K+ IP
Sbjct: 135 DGVFDVLPKKEVTLLRHEMEKLRKYLGGIKEMKKVPDALFIIDPKKEEIAVAEARKLHIP 194
Query: 207 TVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
+ VD+NC+P++I YP+P NDD A++ A+L+G++ +
Sbjct: 195 IIATVDTNCDPDMIEYPIPANDDAIRAVKLLTGKIADAVLEGRQGE 240
>gi|307720320|ref|YP_003891460.1| 30S ribosomal protein S2P [Sulfurimonas autotrophica DSM 16294]
gi|306978413|gb|ADN08448.1| SSU ribosomal protein S2P [Sulfurimonas autotrophica DSM 16294]
Length = 257
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 100/227 (44%), Gaps = 47/227 (20%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +KD+ + VH GH+ + +MK YI+GVR+ I DL ++ R+ V A
Sbjct: 1 MVTMKDLLECGVHFGHQTRRWNPKMKKYIFGVRKNIYIIDLQKTLRYFRNTYTIVMDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN------------------- 166
VLFVG Q + A C W GM TN
Sbjct: 61 EGKTVLFVGTKKQARNSVRDAAIACNMPYVDNRWLGGMLTNFPTIQKSIRKLDVITEMQE 120
Query: 167 ------------------SEKL------FRAVTRLPDLVILTNTLTTVLEPNPAIGEAAK 202
+KL R + +LPD++ + + + + + A+ EA
Sbjct: 121 NGQIDLLTKKEALMLSRKKDKLEQYFGGIRNMKKLPDMLFVVDAV----KEHIAVLEARC 176
Query: 203 MCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
+ IP V +D+NC+P+LITYP+PGNDD +IQ +C+ AI +GK
Sbjct: 177 LNIPVVAPLDTNCDPDLITYPIPGNDDAIRSIQLFCREMTAAINEGK 223
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,000,615,475
Number of Sequences: 23463169
Number of extensions: 162935780
Number of successful extensions: 412905
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4365
Number of HSP's successfully gapped in prelim test: 311
Number of HSP's that attempted gapping in prelim test: 404229
Number of HSP's gapped (non-prelim): 8514
length of query: 268
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 128
effective length of database: 9,074,351,707
effective search space: 1161517018496
effective search space used: 1161517018496
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)