Your job contains 1 sequence.
>psy13427
MIHPCLRLSINSRLSTQTHYLFKKLSTVPNVDPLPSTSNTESKDTSQEPEVPNPLRYHDY
FQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFV
AHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDL
VILTNTLTTVLEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQV
FKTAILKGKKAKQDTLKLLSEKQEVQHN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13427
(268 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0031639 - symbol:mRpS2 "mitochondrial ribosomal pr... 663 4.1e-65 1
MGI|MGI:2153089 - symbol:Mrps2 "mitochondrial ribosomal p... 583 1.2e-56 1
RGD|1309116 - symbol:Mrps2 "mitochondrial ribosomal prote... 574 1.1e-55 1
UNIPROTKB|Q9Y399 - symbol:MRPS2 "28S ribosomal protein S2... 566 7.8e-55 1
UNIPROTKB|F1PHF1 - symbol:MRPS2 "Uncharacterized protein"... 562 2.1e-54 1
UNIPROTKB|P82923 - symbol:MRPS2 "28S ribosomal protein S2... 558 5.5e-54 1
UNIPROTKB|F1S001 - symbol:MRPS2 "Uncharacterized protein"... 553 1.9e-53 1
UNIPROTKB|Q5T8A0 - symbol:MRPS2 "28S ribosomal protein S2... 549 4.9e-53 1
ZFIN|ZDB-GENE-070112-992 - symbol:mrps2 "mitochondrial ri... 534 1.9e-51 1
WB|WBGene00020718 - symbol:mrps-2 species:6239 "Caenorhab... 455 4.5e-43 1
TIGR_CMR|APH_0397 - symbol:APH_0397 "ribosomal protein S2... 206 1.2e-28 2
TIGR_CMR|NSE_0948 - symbol:NSE_0948 "ribosomal protein S2... 184 2.6e-27 2
UNIPROTKB|F1NVE1 - symbol:Gga.22522 "Uncharacterized prot... 302 7.3e-27 1
TIGR_CMR|GSU_1921 - symbol:GSU_1921 "ribosomal protein S2... 174 2.4e-24 2
TIGR_CMR|SO_1629 - symbol:SO_1629 "ribosomal protein S2" ... 187 4.9e-24 2
TIGR_CMR|CHY_1787 - symbol:CHY_1787 "ribosomal protein S2... 167 8.0e-24 2
TIGR_CMR|CPS_1553 - symbol:CPS_1553 "ribosomal protein S2... 172 9.2e-24 2
TIGR_CMR|CJE_1316 - symbol:CJE_1316 "ribosomal protein S2... 166 1.5e-23 2
TIGR_CMR|ECH_0514 - symbol:ECH_0514 "ribosomal protein S2... 176 9.6e-23 2
UNIPROTKB|P0A7V0 - symbol:rpsB species:83333 "Escherichia... 176 1.9e-22 2
TIGR_CMR|SPO_1976 - symbol:SPO_1976 "ribosomal protein S2... 162 3.1e-22 2
TIGR_CMR|DET_0377 - symbol:DET_0377 "ribosomal protein S2... 152 4.1e-21 2
TIGR_CMR|BA_3965 - symbol:BA_3965 "ribosomal protein S2" ... 149 6.5e-19 2
UNIPROTKB|P66537 - symbol:rpsB "30S ribosomal protein S2"... 142 1.9e-18 2
UNIPROTKB|Q9KPV2 - symbol:rpsB "30S ribosomal protein S2"... 149 3.9e-17 2
TIGR_CMR|VC_2260 - symbol:VC_2260 "ribosomal protein S2" ... 149 3.9e-17 2
SGD|S000000996 - symbol:MRP4 "Mitochondrial ribosomal pro... 126 5.8e-17 3
POMBASE|SPAC24C9.10c - symbol:mrp4 "mitochondrial ribosom... 135 6.2e-15 2
TAIR|locus:2096394 - symbol:RPS2 "ribosomal protein S2" s... 186 1.4e-14 1
ASPGD|ASPL0000014062 - symbol:AN4251 species:162425 "Emer... 134 1.7e-14 2
UNIPROTKB|G4NGF2 - symbol:MGG_04331 "37S ribosomal protei... 128 3.2e-13 3
UNIPROTKB|P0C480 - symbol:rps2 "30S ribosomal protein S2,... 118 9.0e-13 2
UNIPROTKB|P0C481 - symbol:rps2 "30S ribosomal protein S2,... 118 9.0e-13 2
UNIPROTKB|P0C482 - symbol:rps2 "30S ribosomal protein S2,... 118 9.0e-13 2
UNIPROTKB|Q6ENI1 - symbol:rps2 "30S ribosomal protein S2,... 118 9.0e-13 2
CGD|CAL0001448 - symbol:orf19.5747 species:5476 "Candida ... 125 3.0e-12 2
>FB|FBgn0031639 [details] [associations]
symbol:mRpS2 "mitochondrial ribosomal protein S2"
species:7227 "Drosophila melanogaster" [GO:0006412 "translation"
evidence=ISS] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] InterPro:IPR001865 InterPro:IPR005706 Pfam:PF00318
PRINTS:PR00395 EMBL:AE014134 GO:GO:0006412 GO:GO:0003735
GO:GO:0005763 InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
eggNOG:COG0052 CTD:51116 GeneTree:ENSGT00390000017382 OMA:YAHTRYW
EMBL:AY118630 RefSeq:NP_523473.2 UniGene:Dm.2745 SMR:Q8MSS7
STRING:Q8MSS7 EnsemblMetazoa:FBtr0077408 GeneID:33688
KEGG:dme:Dmel_CG2937 UCSC:CG2937-RA FlyBase:FBgn0031639
HOGENOM:HOG000236681 InParanoid:Q8MSS7 OrthoDB:EOG4WM39F
GenomeRNAi:33688 NextBio:784797 Uniprot:Q8MSS7
Length = 264
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 129/235 (54%), Positives = 167/235 (71%)
Query: 34 LPSTSNTESKDTSQEPEV---PNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERM 90
L ST +S +T E L++ DYFQV NL V+D+F+A+VH GHK GSLD+RM
Sbjct: 22 LQSTQPEQSVETEPEDIALVEQRILKHPDYFQVHNLFTVRDLFNARVHYGHKEGSLDDRM 81
Query: 91 KPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDC 150
+PY++G R G +IFDLD++A LRDALNF AHIA+RDGI+LF ++A NS L+E+ AQ+
Sbjct: 82 RPYLFGSRLGHLIFDLDKTASHLRDALNFAAHIAFRDGIILFFNRNAMNSHLVERKAQEA 141
Query: 151 QEFAHTRFWRQGMFTNSEKLFRAVTRLPDXXXXXXXXXXXXEPNPAIGEAAKMCIPTVGI 210
EF+HTRFWR G+FTN+ F AVTRLPD + A+ +AAKM IPT+GI
Sbjct: 142 GEFSHTRFWRGGIFTNANVQFDAVTRLPDLCIFLNTQNNVMAQHTAVRDAAKMAIPTIGI 201
Query: 211 VDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKL--LSEKQ 263
VDSNCNPNLITYPVPGNDD+P+A++ YC +FK AIL+GK+ ++ L L L E Q
Sbjct: 202 VDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAILRGKRERRQLLGLPPLDESQ 256
>MGI|MGI:2153089 [details] [associations]
symbol:Mrps2 "mitochondrial ribosomal protein S2"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR001865
InterPro:IPR005706 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 MGI:MGI:2153089 GO:GO:0005739
GO:GO:0006412 GO:GO:0003735 EMBL:AL772249 GO:GO:0015935
InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
HOGENOM:HOG000071892 eggNOG:COG0052 CTD:51116
GeneTree:ENSGT00390000017382 HOVERGEN:HBG028633 OMA:YAHTRYW
OrthoDB:EOG4XWFZM EMBL:AB055389 EMBL:AK077219 EMBL:AK154131
EMBL:AK165956 EMBL:BC060503 IPI:IPI00126011 RefSeq:NP_001159503.2
RefSeq:NP_536700.3 UniGene:Mm.294951 ProteinModelPortal:Q924T2
SMR:Q924T2 STRING:Q924T2 PhosphoSite:Q924T2 PaxDb:Q924T2
PRIDE:Q924T2 Ensembl:ENSMUST00000038600 GeneID:118451
KEGG:mmu:118451 UCSC:uc008iyi.1 InParanoid:A2AK29 NextBio:369732
Bgee:Q924T2 CleanEx:MM_MRPS2 Genevestigator:Q924T2
GermOnline:ENSMUSG00000035772 Uniprot:Q924T2
Length = 291
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 112/221 (50%), Positives = 152/221 (68%)
Query: 33 PLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKP 92
P+P+ S + D Q + PL++ D+F V+ L VK +F+A+VHLGHK G M+P
Sbjct: 42 PVPAVSEPQDGDDFQSRILDTPLQHSDFFNVKELFSVKSLFEARVHLGHKAGCRHRFMEP 101
Query: 93 YIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQE 152
YI+G R GQ I DLDQ+A L+ ALNF AH+AYR GI+LFV ++ Q S LIE TAQ C E
Sbjct: 102 YIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYRKGIILFVSRNRQFSHLIETTAQACGE 161
Query: 153 FAHTRFWRQGMFTNSEKLFRAVTRLPDXXXXXXXXXXXXEPNPAIGEAAKMCIPTVGIVD 212
+AHTR+++ G+ TN++ LF RLPD EP+ A+ +AAKM IPTVGIVD
Sbjct: 162 YAHTRYFKGGLLTNAQLLFGPSVRLPDLIIFLHTLNNVFEPHVAVRDAAKMNIPTVGIVD 221
Query: 213 SNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+NCNP LITYP+PGNDD+P AIQ +C++F+T I + K+ ++
Sbjct: 222 TNCNPCLITYPIPGNDDSPQAIQLFCKLFRTTINRAKEKRR 262
>RGD|1309116 [details] [associations]
symbol:Mrps2 "mitochondrial ribosomal protein S2" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 RGD:1309116
GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 GO:GO:0015935
InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
GeneTree:ENSGT00390000017382 OMA:YAHTRYW OrthoDB:EOG4XWFZM
IPI:IPI00207595 Ensembl:ENSRNOT00000013548 UCSC:RGD:1309116
Uniprot:D3ZY44
Length = 291
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 111/221 (50%), Positives = 151/221 (68%)
Query: 33 PLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKP 92
P+P+ S + D Q + PL++ D+F V+ L VK +F+A+VHLGHK G M+P
Sbjct: 42 PVPAVSEPQDGDDFQSRILDVPLQHSDFFNVKELFSVKSLFEARVHLGHKAGCRHRFMEP 101
Query: 93 YIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQE 152
YI+G R GQ I DLDQ+A L+ ALNF AH+AYR GI+LFV ++ Q S LIE TAQ C E
Sbjct: 102 YIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYRKGIILFVSRNRQFSHLIETTAQACGE 161
Query: 153 FAHTRFWRQGMFTNSEKLFRAVTRLPDXXXXXXXXXXXXEPNPAIGEAAKMCIPTVGIVD 212
+AHTR+++ G+ TN++ LF RLPD E + A+ +AAKM IPTVGIVD
Sbjct: 162 YAHTRYFKGGLLTNAQLLFGPTVRLPDLIVFLHTLNNVFESHVAVRDAAKMNIPTVGIVD 221
Query: 213 SNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+NCNP LITYP+PGNDD+P AIQ +C++F+T I + K+ ++
Sbjct: 222 TNCNPCLITYPIPGNDDSPQAIQLFCKLFRTTINRAKEKRR 262
>UNIPROTKB|Q9Y399 [details] [associations]
symbol:MRPS2 "28S ribosomal protein S2, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0005739 GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 EMBL:AL161452 InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 HOGENOM:HOG000071892 eggNOG:COG0052 CTD:51116
HOVERGEN:HBG028633 OrthoDB:EOG4XWFZM EMBL:AB055388 EMBL:AF151849
EMBL:BC004905 EMBL:BC008017 EMBL:BC013108 IPI:IPI00006970
RefSeq:NP_057118.1 UniGene:Hs.382044 ProteinModelPortal:Q9Y399
SMR:Q9Y399 IntAct:Q9Y399 STRING:Q9Y399 PhosphoSite:Q9Y399
DMDM:24212389 PaxDb:Q9Y399 PRIDE:Q9Y399 Ensembl:ENST00000241600
Ensembl:ENST00000371785 GeneID:51116 KEGG:hsa:51116 UCSC:uc004cfv.4
GeneCards:GC09P138391 H-InvDB:HIX0035038 HGNC:HGNC:14495 MIM:611971
neXtProt:NX_Q9Y399 PharmGKB:PA31007 InParanoid:Q9Y399
PhylomeDB:Q9Y399 GenomeRNAi:51116 NextBio:53885 ArrayExpress:Q9Y399
Bgee:Q9Y399 CleanEx:HS_MRPS2 Genevestigator:Q9Y399
GermOnline:ENSG00000122140 Uniprot:Q9Y399
Length = 296
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 110/215 (51%), Positives = 149/215 (69%)
Query: 41 ESKDTSQ-EPEVPN-PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVR 98
ES+D++ ++ N PL++ D+F V+ L V+ +FDA+VHLGHK G M+PYI+G R
Sbjct: 51 ESEDSTDFNDKILNEPLKHSDFFNVKELFSVRSLFDARVHLGHKAGCRHRFMEPYIFGSR 110
Query: 99 QGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRF 158
I DL+Q+A L+ ALNF AH+AYR GI+LF+ ++ Q S LIE A+DC E+AHTR+
Sbjct: 111 LDHDIIDLEQTATHLQLALNFTAHMAYRKGIILFISRNRQFSYLIENMARDCGEYAHTRY 170
Query: 159 WRQGMFTNSEKLFRAVTRLPDXXXXXXXXXXXXEPNPAIGEAAKMCIPTVGIVDSNCNPN 218
+R GM TN+ LF RLPD EP+ A+ +AAKM IPTVGIVD+NCNP
Sbjct: 171 FRGGMLTNARLLFGPTVRLPDLIIFLHTLNNIFEPHVAVRDAAKMNIPTVGIVDTNCNPC 230
Query: 219 LITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
LITYPVPGNDD+P A+ YC++F+TAI + K+ +Q
Sbjct: 231 LITYPVPGNDDSPLAVHLYCRLFQTAITRAKEKRQ 265
>UNIPROTKB|F1PHF1 [details] [associations]
symbol:MRPS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 GO:GO:0006412
GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 GeneTree:ENSGT00390000017382 EMBL:AAEX03006806
Ensembl:ENSCAFT00000031602 Uniprot:F1PHF1
Length = 337
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 109/221 (49%), Positives = 151/221 (68%)
Query: 34 LPSTSNTE-SKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKP 92
+P+ E S D S + PL++ D+F V+ L V+ +F+A+VHLGHK G M+P
Sbjct: 45 IPAVGEPEGSADISHHI-LSEPLKHSDFFNVKELFSVRSLFNARVHLGHKAGCRHRFMEP 103
Query: 93 YIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQE 152
YI+G R GQ I DL+Q+A L+ ALNF AH+AYR GI+LFV ++ Q S LIE TAQDC E
Sbjct: 104 YIFGSRLGQDIIDLEQTAVHLQLALNFTAHVAYRKGIILFVSRNRQFSHLIETTAQDCGE 163
Query: 153 FAHTRFWRQGMFTNSEKLFRAVTRLPDXXXXXXXXXXXXEPNPAIGEAAKMCIPTVGIVD 212
+AHTR+++ G+ TNS L ++ RLPD EP+ A+ +AAKM IPTVGIVD
Sbjct: 164 YAHTRYFKGGLLTNSSLLLGSMVRLPDLIIFLHTLNNVFEPHVAVRDAAKMHIPTVGIVD 223
Query: 213 SNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
+NCNP LITYP+PGNDD+P A+ +C++F+T I + K+ ++
Sbjct: 224 TNCNPCLITYPIPGNDDSPPAVHLFCRLFRTTINRAKQKRR 264
>UNIPROTKB|P82923 [details] [associations]
symbol:MRPS2 "28S ribosomal protein S2, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0005739 GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
HOGENOM:HOG000071892 eggNOG:COG0052 EMBL:BC146028 IPI:IPI00700022
RefSeq:NP_001092347.1 UniGene:Bt.28838 ProteinModelPortal:P82923
IntAct:P82923 STRING:P82923 PRIDE:P82923 Ensembl:ENSBTAT00000007473
GeneID:505681 KEGG:bta:505681 CTD:51116
GeneTree:ENSGT00390000017382 HOVERGEN:HBG028633 InParanoid:P82923
OMA:YAHTRYW OrthoDB:EOG4XWFZM NextBio:20867261 Uniprot:P82923
Length = 293
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 108/222 (48%), Positives = 152/222 (68%)
Query: 43 KDTSQEPEV-PNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQ 101
+D+ + + PL++ D+F V+ L V+ +F+A+VHLGHK G M+PYI+G R GQ
Sbjct: 43 RDSDRSARILSEPLKHSDFFNVKELFSVRSLFNARVHLGHKAGCRHRFMEPYIFGSRLGQ 102
Query: 102 IIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQ 161
I DL+Q+A L+ ALNF AH+A+R GI+LFV ++ Q S LIE TA+ C E+AHTR+++
Sbjct: 103 DIIDLEQTATHLQLALNFTAHVAFRGGIILFVSRARQFSHLIESTARSCGEYAHTRYFKG 162
Query: 162 GMFTNSEKLFRAVTRLPDXXXXXXXXXXXXEPNPAIGEAAKMCIPTVGIVDSNCNPNLIT 221
G+ TN+ L A RLPD EP+ A+ +AAKM IPTVG+VD+NCNP LIT
Sbjct: 163 GLLTNAPLLLGARVRLPDLIIFLHTLNNVFEPHVAVRDAAKMSIPTVGVVDTNCNPCLIT 222
Query: 222 YPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLLSEKQ 263
YPVPGNDD+P A+Q +CQ+F+TA+ + K+ K+ L+ L Q
Sbjct: 223 YPVPGNDDSPPAVQLFCQLFQTAVTRAKE-KRRQLEALYRLQ 263
>UNIPROTKB|F1S001 [details] [associations]
symbol:MRPS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 GO:GO:0015935
InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
GeneTree:ENSGT00390000017382 OMA:YAHTRYW EMBL:FP102268
RefSeq:XP_003122327.1 UniGene:Ssc.1787 Ensembl:ENSSSCT00000006335
GeneID:100518410 KEGG:ssc:100518410 Uniprot:F1S001
Length = 289
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 111/244 (45%), Positives = 159/244 (65%)
Query: 24 KLSTVPNVDPLPS-----TSNTESKDTSQEPEVPN---------PLRYHDYFQVRNLVKV 69
+L VP P P+ T + + ++EPE+ N PL++ D+F ++ L V
Sbjct: 21 RLHLVPTATPGPAGPTGRTLGSNAAPAAREPELGNDLRDRILSEPLKHADFFNLKELFSV 80
Query: 70 KDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGI 129
+ +FDA+VHLGHK G M+PY++G R GQ I DL+Q+A L+ ALNF AH+AYR+GI
Sbjct: 81 RSLFDARVHLGHKAGCRHRFMEPYLFGSRLGQDIIDLEQTAAHLQLALNFTAHVAYREGI 140
Query: 130 VLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDXXXXXXXXXX 189
+LFV + Q + LIE TA+DC E+AHTR+++ G+ TN+ L RLPD
Sbjct: 141 ILFVSRHRQFAHLIETTARDCGEYAHTRYFKGGLLTNAPLLLGPGVRLPDLIIFLHTLNN 200
Query: 190 XXEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
EP+ A+ +AAKM IPTVGIVD+NCNP LITYPVPGNDD+P A++ +C++F+ AI + K
Sbjct: 201 VFEPHVAVRDAAKMNIPTVGIVDTNCNPALITYPVPGNDDSPPAVRLFCRLFQVAISRAK 260
Query: 250 KAKQ 253
+ ++
Sbjct: 261 EKRR 264
>UNIPROTKB|Q5T8A0 [details] [associations]
symbol:MRPS2 "28S ribosomal protein S2, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 GO:GO:0006412
GO:GO:0003735 GO:GO:0015935 EMBL:AL161452 InterPro:IPR023591
PANTHER:PTHR12534 SUPFAM:SSF52313 HOGENOM:HOG000071892
HOVERGEN:HBG028633 OMA:YAHTRYW UniGene:Hs.382044 HGNC:HGNC:14495
SMR:Q5T8A0 Ensembl:ENST00000453385 Uniprot:Q5T8A0
Length = 270
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 107/206 (51%), Positives = 143/206 (69%)
Query: 41 ESKDTSQ-EPEVPN-PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVR 98
ES+D++ ++ N PL++ D+F V+ L V+ +FDA+VHLGHK G M+PYI+G R
Sbjct: 65 ESEDSTDFNDKILNEPLKHSDFFNVKELFSVRSLFDARVHLGHKAGCRHRFMEPYIFGSR 124
Query: 99 QGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRF 158
I DL+Q+A L+ ALNF AH+AYR GI+LF+ ++ Q S LIE A+DC E+AHTR+
Sbjct: 125 LDHDIIDLEQTATHLQLALNFTAHMAYRKGIILFISRNRQFSYLIENMARDCGEYAHTRY 184
Query: 159 WRQGMFTNSEKLFRAVTRLPDXXXXXXXXXXXXEPNPAIGEAAKMCIPTVGIVDSNCNPN 218
+R GM TN+ LF RLPD EP+ A+ +AAKM IPTVGIVD+NCNP
Sbjct: 185 FRGGMLTNARLLFGPTVRLPDLIIFLHTLNNIFEPHVAVRDAAKMNIPTVGIVDTNCNPC 244
Query: 219 LITYPVPGNDDTPSAIQYYCQVFKTA 244
LITYPVPGNDD+P A+ YC++F+TA
Sbjct: 245 LITYPVPGNDDSPLAVHLYCRLFQTA 270
>ZFIN|ZDB-GENE-070112-992 [details] [associations]
symbol:mrps2 "mitochondrial ribosomal protein S2"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
ZFIN:ZDB-GENE-070112-992 GO:GO:0006412 GO:GO:0003735 GO:GO:0015935
InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 GeneTree:ENSGT00390000017382 EMBL:CU655836
IPI:IPI00972285 Ensembl:ENSDART00000114670 ArrayExpress:F1RDB9
Bgee:F1RDB9 Uniprot:F1RDB9
Length = 285
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 107/228 (46%), Positives = 149/228 (65%)
Query: 33 PLPSTSNTESKDTSQEPEVPN-PLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMK 91
P +T T++ D ++ N PL DYF + L +KD+FDA+VHLGHK G M+
Sbjct: 61 PAAATIETDATD-----KILNFPLTQPDYFHLSELFSMKDLFDARVHLGHKKGCRHALME 115
Query: 92 PYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQ 151
PY++G R I DL+Q+ + L+ ALNF AH+A+R G+VLFV + Q + L+E TA+DC
Sbjct: 116 PYLFGCRLDMDIIDLEQTVDHLQRALNFTAHVAFRGGVVLFVSRRRQFAHLVETTARDCG 175
Query: 152 EFAHTRFWRQGMFTNSEKLFRAVTRLPDXXXXXXXXXXXXEPNPAIGEAAKMCIPTVGIV 211
E+AHTR+W+ G+ TN+ + RLPD + + I +AAKM IPTVGIV
Sbjct: 176 EYAHTRYWKGGLLTNAPIQYNPGVRLPDLIVFLSTLNNVFQEHVGIRDAAKMNIPTVGIV 235
Query: 212 DSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDTLKLL 259
DSNCNP+LI+YPVPGNDDTP+A++ YC++FK I K K K+ ++LL
Sbjct: 236 DSNCNPSLISYPVPGNDDTPAAMELYCRLFKMTI-KRAKDKRRQMELL 282
>WB|WBGene00020718 [details] [associations]
symbol:mrps-2 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0009306 "protein secretion"
evidence=IMP] InterPro:IPR001865 InterPro:IPR005706 Pfam:PF00318
PRINTS:PR00395 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0006412 GO:GO:0009306
GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 HOGENOM:HOG000071892 eggNOG:COG0052
GeneTree:ENSGT00390000017382 OMA:YAHTRYW EMBL:FO081628 PIR:T32224
RefSeq:NP_505180.1 ProteinModelPortal:O17004 SMR:O17004
STRING:O17004 PaxDb:O17004 EnsemblMetazoa:T23B12.3.1
EnsemblMetazoa:T23B12.3.2 GeneID:179229 KEGG:cel:CELE_T23B12.3
UCSC:T23B12.3.1 CTD:179229 WormBase:T23B12.3 InParanoid:O17004
NextBio:904474 Uniprot:O17004
Length = 264
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 89/234 (38%), Positives = 139/234 (59%)
Query: 23 KKLSTVPNVDPLPSTSNTES---KDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAKVHL 79
K +++ + +P + E + T +P V L++ D F +V + +MF A++H
Sbjct: 25 KPVASTSSSSSVPDRATLEKGTVQPTVLKPFVSASLQHEDLFNFEKMVHIDEMFKARLHY 84
Query: 80 GHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQN 139
GHK+G+++ MK +YG R G +FDLD + + L ALNFVAH++ R G++LFV +
Sbjct: 85 GHKVGTVNNNMKWALYGERLGVCLFDLDITKKYLVRALNFVAHVSLRGGMILFVTSNRDT 144
Query: 140 SLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPDXXXXXXXXXXXXEPNPAIGE 199
+EK A + +++H R W+ G TN+ +L A RLPD E +PAI E
Sbjct: 145 MFDVEKAADEVGQYSHVRKWQSGTLTNTRQLLGASVRLPDAVCFLSTLTSLGENHPAIVE 204
Query: 200 AAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
AAKM IPT+G+VDSN +P +TY VP NDDTP + +Y ++FK A+ KG++ ++
Sbjct: 205 AAKMAIPTIGVVDSNSDPAYLTYLVPANDDTPQSTEYLLRMFKEAVRKGQEERK 258
>TIGR_CMR|APH_0397 [details] [associations]
symbol:APH_0397 "ribosomal protein S2" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 OMA:NVAGGTD RefSeq:YP_505002.1
ProteinModelPortal:Q2GKU9 SMR:Q2GKU9 STRING:Q2GKU9 GeneID:3930049
KEGG:aph:APH_0397 PATRIC:20949402 ProtClustDB:PRK05299
BioCyc:APHA212042:GHPM-425-MONOMER Uniprot:Q2GKU9
Length = 296
Score = 206 (77.6 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 48/113 (42%), Positives = 67/113 (59%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGV-RQGQI-IFDLDQSAELLRDALNFVAHIAYR 126
++D+ +A VHLGHK G + M PYIYGV R I I DL ++A LLR+AL+ + + +R
Sbjct: 9 IRDLMEAGVHLGHKAGRWNPAMAPYIYGVHRYKDIHIIDLRKTAVLLRNALSVLYDVVHR 68
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPD 179
G VLFVG Q S +I + A C ++ W GM TN E + ++ RL D
Sbjct: 69 RGRVLFVGTKVQASNVIAEEAARCGQYYVNHRWLGGMLTNWETVSSSIRRLLD 121
Score = 128 (50.1 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 196 AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILK 247
AI EA K+ IP V ++D+N +P + YP+PGNDD+ +I ++C+ IL+
Sbjct: 176 AIQEANKLKIPVVAVLDTNSDPRGVDYPIPGNDDSIRSIDFFCRAVSNTILE 227
>TIGR_CMR|NSE_0948 [details] [associations]
symbol:NSE_0948 "ribosomal protein S2" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 GO:GO:0003735 EMBL:CP000237 GenomeReviews:CP000237_GR
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
RefSeq:YP_506812.1 ProteinModelPortal:Q2GCI4 STRING:Q2GCI4
GeneID:3932142 KEGG:nse:NSE_0948 PATRIC:22681875
BioCyc:NSEN222891:GHFU-950-MONOMER Uniprot:Q2GCI4
Length = 298
Score = 184 (69.8 bits), Expect = 2.6e-27, Sum P(2) = 2.6e-27
Identities = 41/112 (36%), Positives = 62/112 (55%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQI-IFDLDQSAELLRDALNFVAHIAY 125
V VK++F+ HLGHK + +M YIYG + I DL ++ +LR ALN ++ +A
Sbjct: 8 VTVKNLFEVGAHLGHKTRFWNPKMVSYIYGTSNAKTHIVDLQKTVPMLRTALNAISDVAA 67
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL 177
G VLFVG Q +I++ A C ++ W GMFTN + ++V +L
Sbjct: 68 NSGRVLFVGTKMQACDIIKEEATRCGQYYVNLRWPSGMFTNWNTVSKSVKKL 119
Score = 155 (59.6 bits), Expect = 2.6e-27, Sum P(2) = 2.6e-27
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 196 AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKG--KKAKQ 253
A+ EA K+ IP V +VD+NC+P+ ITY +PGNDD+ I+YYC + A+L G + ++
Sbjct: 176 AVEEAWKLGIPVVAVVDTNCDPSKITYAIPGNDDSLRCIEYYCSLVADAVLVGIESELQR 235
Query: 254 DTLKLLSEKQE 264
K L +K +
Sbjct: 236 KQSKELDDKAD 246
Score = 40 (19.1 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 71 DMFDAKVHLGHKIGSLDERMKPYIYGVRQ-G---QIIFDLDQSAE 111
D+ K L I ER++ Y+ GVR+ G IIF +D E
Sbjct: 131 DVLSKKERLS--INRKRERIEKYLGGVRKMGGLPNIIFVIDPKKE 173
>UNIPROTKB|F1NVE1 [details] [associations]
symbol:Gga.22522 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PROSITE:PS00962 GO:GO:0005739
GO:GO:0006412 GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591
PANTHER:PTHR12534 SUPFAM:SSF52313 GeneTree:ENSGT00390000017382
EMBL:AADN02026425 IPI:IPI00588562 Ensembl:ENSGALT00000034825
Uniprot:F1NVE1
Length = 122
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 60/121 (49%), Positives = 84/121 (69%)
Query: 48 EPE---VPNPLRYHDYFQVRNLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIF 104
+PE + PLR+ D+F+V+NL +KD+FDA+VHLGHK G + MKPYI+G R Q I
Sbjct: 3 DPEDKLLAEPLRHPDFFKVKNLFTLKDLFDARVHLGHKKGCRHQFMKPYIFGCRLDQDII 62
Query: 105 DLDQSAELLRDALNFVAHIAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMF 164
DLDQ+ + L+ A NF AH+AYR GI+LFV ++ Q L +E TA++C E R+W+ G+
Sbjct: 63 DLDQTMQHLQLADNFTAHVAYRKGIILFVSRNRQFCLRVESTARECGETTR-RYWQGGLL 121
Query: 165 T 165
T
Sbjct: 122 T 122
>TIGR_CMR|GSU_1921 [details] [associations]
symbol:GSU_1921 "ribosomal protein S2" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR001865
InterPro:IPR005706 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 GO:GO:0006412 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0015935
HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
RefSeq:NP_952970.1 ProteinModelPortal:Q74BW1 SMR:Q74BW1
GeneID:2685346 KEGG:gsu:GSU1921 PATRIC:22026707
BioCyc:GSUL243231:GH27-1978-MONOMER Uniprot:Q74BW1
Length = 251
Score = 174 (66.3 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 38/111 (34%), Positives = 59/111 (53%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K++ +A VH GH+ + +MKPYI+G R G I DL ++ L ++A NFV A
Sbjct: 4 ITMKELLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKNAYNFVRENAQA 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL 177
+LFVG Q I + A C + + W GM TN + +++ RL
Sbjct: 64 GETMLFVGTKKQAQDAIGEEAVRCGMYFVNQRWLGGMLTNFVTVKQSIDRL 114
Score = 137 (53.3 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 196 AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
AI EA K+ IP V +VD+NC+P+ I Y +PGNDD AI+ A+++G +A+
Sbjct: 172 AISEAKKLGIPVVAVVDTNCDPDPIDYVIPGNDDAIRAIRLLTSKMADAVIEGSQARDAV 231
Query: 256 LKLLSEK 262
L+ E+
Sbjct: 232 LQTGDEE 238
>TIGR_CMR|SO_1629 [details] [associations]
symbol:SO_1629 "ribosomal protein S2" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
RefSeq:NP_717240.1 ProteinModelPortal:Q8EGH5 SMR:Q8EGH5
PRIDE:Q8EGH5 GeneID:1169423 KEGG:son:SO_1629 PATRIC:23522892
Uniprot:Q8EGH5
Length = 242
Score = 187 (70.9 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 37/113 (32%), Positives = 64/113 (56%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R G I +L+ + + +AL F++++A +
Sbjct: 4 VSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPD 179
G VLFVG I++ A C ++ W GM TN + + +++ RL +
Sbjct: 64 KGKVLFVGTKRAAGEAIKEAAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKE 116
Score = 103 (41.3 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 23/54 (42%), Positives = 30/54 (55%)
Query: 196 AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
AI EA + IP V +VD+N P+ + Y VPGNDD AI+ Y A G+
Sbjct: 172 AIKEANNLGIPVVAVVDTNSAPDGVNYIVPGNDDAMRAIRLYTTSVAAAANAGR 225
>TIGR_CMR|CHY_1787 [details] [associations]
symbol:CHY_1787 "ribosomal protein S2" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006412 GO:GO:0003735 GO:GO:0015935 HAMAP:MF_00291_B
InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 HOGENOM:HOG000071892 eggNOG:COG0052 KO:K02967
OMA:SYIDRAY HSSP:P80371 RefSeq:YP_360607.1
ProteinModelPortal:Q3AB77 SMR:Q3AB77 STRING:Q3AB77 GeneID:3726905
KEGG:chy:CHY_1787 PATRIC:21276685
BioCyc:CHYD246194:GJCN-1786-MONOMER Uniprot:Q3AB77
Length = 232
Score = 167 (63.8 bits), Expect = 8.0e-24, Sum P(2) = 8.0e-24
Identities = 36/112 (32%), Positives = 61/112 (54%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
++ +K + +A VH GH+ + +M YI+ R G I DL ++A+ L +A +FV ++
Sbjct: 3 VISMKQLLEAGVHFGHQTRRWNPKMAEYIFTDRNGIYIIDLQKTAKKLEEAYSFVRELSA 62
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL 177
+ G +LFVG Q I++ A+ C F + W G TN + + + V RL
Sbjct: 63 QGGTILFVGTKKQAQDAIKEEAERCGMFYVNQRWLGGTLTNFKTIRKRVERL 114
Score = 133 (51.9 bits), Expect = 8.0e-24, Sum P(2) = 8.0e-24
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 196 AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
A+ EA K+ IP V IVD+NC+P+ + Y +PGNDD A++ A+++G++ +Q
Sbjct: 172 AVAEARKLDIPVVAIVDTNCDPDEVDYVIPGNDDAIRAVKLITSKIADAVIEGRQGEQ 229
>TIGR_CMR|CPS_1553 [details] [associations]
symbol:CPS_1553 "ribosomal protein S2" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 OMA:SYIDRAY HSSP:P80371 RefSeq:YP_268295.1
ProteinModelPortal:Q485H0 SMR:Q485H0 STRING:Q485H0 GeneID:3522975
KEGG:cps:CPS_1553 PATRIC:21466313
BioCyc:CPSY167879:GI48-1634-MONOMER Uniprot:Q485H0
Length = 242
Score = 172 (65.6 bits), Expect = 9.2e-24, Sum P(2) = 9.2e-24
Identities = 39/113 (34%), Positives = 61/113 (53%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GHK + +MK +I+G R I +L+Q+ + +AL FV +++ +
Sbjct: 4 VSMRDMLKAGVHFGHKTRYWNPKMKQFIFGARDKVHIINLEQTVPMFNEALAFVNNVSSK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPD 179
G VLFVG S I+ A +F W GM TN + + +++ RL D
Sbjct: 64 KGKVLFVGTKRAASDAIKDAAIKSDQFYVNHRWLGGMLTNWKTVRQSIKRLKD 116
Score = 129 (50.5 bits), Expect = 9.2e-24, Sum P(2) = 9.2e-24
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 196 AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKK 250
AI EA + IP + +VD+N NP+ + Y VPGNDD A+ YC ++L G++
Sbjct: 172 AIKEANNLGIPVISVVDTNSNPDGVDYVVPGNDDAIRAVTLYCDAVANSVLSGRE 226
>TIGR_CMR|CJE_1316 [details] [associations]
symbol:CJE_1316 "ribosomal protein S2" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0006412 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0015935
HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
RefSeq:YP_179303.1 HSSP:P80371 ProteinModelPortal:Q5HTT2 SMR:Q5HTT2
STRING:Q5HTT2 GeneID:3231823 KEGG:cjr:CJE1316 PATRIC:20044432
BioCyc:CJEJ195099:GJC0-1342-MONOMER Uniprot:Q5HTT2
Length = 263
Score = 166 (63.5 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 31/71 (43%), Positives = 49/71 (69%)
Query: 196 AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK-QD 254
A+ EA ++ IP V +D+NC+P+L+TYP+PGNDD ++Q +CQ AI +GK + QD
Sbjct: 170 AVQEANRLRIPVVAPLDTNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALREQD 229
Query: 255 TLKLLSEKQEV 265
L +E++E+
Sbjct: 230 GEALANEEKEI 240
Score = 148 (57.2 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 33/113 (29%), Positives = 58/113 (51%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V ++D+ + VH GH+ + +MK +I+G R+G + DL ++ R N V A
Sbjct: 1 MVSMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAA 60
Query: 126 RDGIVLFVGQSAQNSLLIEKTAQDC-QEFAHTRFWRQGMFTNSEKLFRAVTRL 177
+LFVG Q I++ A+ C + + R W GM TN + +++ +L
Sbjct: 61 EGKTILFVGTKKQAGGAIKEYAEKCGMPYVNHR-WLGGMMTNFGTIRQSIRKL 112
>TIGR_CMR|ECH_0514 [details] [associations]
symbol:ECH_0514 "ribosomal protein S2" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
RefSeq:YP_507329.1 ProteinModelPortal:Q2GGV4 SMR:Q2GGV4
STRING:Q2GGV4 GeneID:3927057 KEGG:ech:ECH_0514 PATRIC:20576496
BioCyc:ECHA205920:GJNR-516-MONOMER Uniprot:Q2GGV4
Length = 288
Score = 176 (67.0 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 40/117 (34%), Positives = 62/117 (52%)
Query: 65 NLVK--VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAH 122
NL K ++D+ ++ VH GHK + +M PYIYGV I +L + LL++AL +
Sbjct: 3 NLPKFTMRDLVESGVHFGHKASRWNPKMAPYIYGVHNDIHIINLQNTVVLLKNALKALYD 62
Query: 123 IAYRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPD 179
I + G VLF+G Q S +I A C ++ W GM TN E + ++ +L +
Sbjct: 63 IVLKRGRVLFIGTKVQASAIIADEAVRCGQYYINNRWLGGMLTNWETISLSIKKLKE 119
Score = 128 (50.1 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 196 AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILK 247
AI EA K+ IP + ++D+N +P I YP+PGNDD +I ++C++ IL+
Sbjct: 174 AIKEANKLNIPVIAVLDTNSDPAGIDYPIPGNDDAVRSIDFFCKIVSDTILE 225
>UNIPROTKB|P0A7V0 [details] [associations]
symbol:rpsB species:83333 "Escherichia coli K-12"
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA;IPI]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 GO:GO:0008270 EMBL:U70214
GO:GO:0003735 PDB:3J00 PDBsum:3J00 EMBL:V00343 PDB:3FIH PDB:3IZV
PDB:3IZW PDBsum:3FIH PDBsum:3IZV PDBsum:3IZW GO:GO:0022627 PDB:3SFS
PDB:3UOQ PDBsum:3SFS PDBsum:3UOQ HAMAP:MF_00291_B
InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 HOGENOM:HOG000071892 eggNOG:COG0052 KO:K02967
OMA:NVAGGTD PDB:4GAS PDB:4GD1 PDBsum:4GAS PDBsum:4GD1 PDB:1M5G
PDB:1P87 PDB:1VS5 PDB:1VS7 PDB:2AVY PDB:2AW7 PDB:2GY9 PDB:2GYB
PDB:2I2P PDB:2I2U PDB:2QAL PDB:2QAN PDB:2QB9 PDB:2QBB PDB:2QBD
PDB:2QBF PDB:2QBH PDB:2QBJ PDB:2QOU PDB:2QOW PDB:2QOY PDB:2QP0
PDB:2VHO PDB:2VHP PDB:2WWL PDB:2YKR PDB:2Z4K PDB:2Z4M PDB:3DF1
PDB:3DF3 PDB:3E1A PDB:3E1C PDB:3I1M PDB:3I1O PDB:3I1Q PDB:3I1S
PDB:3I1Z PDB:3I21 PDB:3J0U PDB:3J0V PDB:3J0X PDB:3J0Z PDB:3J10
PDB:3J13 PDB:3J18 PDB:3KC4 PDB:3OAQ PDB:3OAR PDB:3OFA PDB:3OFB
PDB:3OFO PDB:3OFP PDB:3OFX PDB:3OFY PDB:3OR9 PDB:3ORA PDB:4A2I
PDB:4ADV PDB:4GAQ PDB:4GD2 PDBsum:1M5G PDBsum:1P87 PDBsum:1VS5
PDBsum:1VS7 PDBsum:2AVY PDBsum:2AW7 PDBsum:2GY9 PDBsum:2GYB
PDBsum:2I2P PDBsum:2I2U PDBsum:2QAL PDBsum:2QAN PDBsum:2QB9
PDBsum:2QBB PDBsum:2QBD PDBsum:2QBF PDBsum:2QBH PDBsum:2QBJ
PDBsum:2QOU PDBsum:2QOW PDBsum:2QOY PDBsum:2QP0 PDBsum:2VHO
PDBsum:2VHP PDBsum:2WWL PDBsum:2YKR PDBsum:2Z4K PDBsum:2Z4M
PDBsum:3DF1 PDBsum:3DF3 PDBsum:3E1A PDBsum:3E1C PDBsum:3I1M
PDBsum:3I1O PDBsum:3I1Q PDBsum:3I1S PDBsum:3I1Z PDBsum:3I21
PDBsum:3J0U PDBsum:3J0V PDBsum:3J0X PDBsum:3J0Z PDBsum:3J10
PDBsum:3J13 PDBsum:3J18 PDBsum:3KC4 PDBsum:3OAQ PDBsum:3OAR
PDBsum:3OFA PDBsum:3OFB PDBsum:3OFO PDBsum:3OFP PDBsum:3OFX
PDBsum:3OFY PDBsum:3OR9 PDBsum:3ORA PDBsum:4A2I PDBsum:4ADV
PDBsum:4GAQ PDBsum:4GD2 ProtClustDB:PRK05299 PIR:A02696
RefSeq:NP_414711.1 RefSeq:YP_488471.1 ProteinModelPortal:P0A7V0
SMR:P0A7V0 IntAct:P0A7V0 SWISS-2DPAGE:P0A7V0 PaxDb:P0A7V0
PRIDE:P0A7V0 EnsemblBacteria:EBESCT00000000658
EnsemblBacteria:EBESCT00000016914 GeneID:12931818 GeneID:947874
KEGG:ecj:Y75_p0165 KEGG:eco:b0169 PATRIC:32115445 EchoBASE:EB0894
EcoGene:EG10901 BioCyc:EcoCyc:EG10901-MONOMER
BioCyc:ECOL316407:JW0164-MONOMER ChEMBL:CHEMBL1922
EvolutionaryTrace:P0A7V0 Genevestigator:P0A7V0 Uniprot:P0A7V0
Length = 241
Score = 176 (67.0 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 38/113 (33%), Positives = 61/113 (53%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MKP+I+G R I +L+++ + +AL + IA R
Sbjct: 4 VSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASR 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPD 179
G +LFVG S ++ A C +F W GM TN + + +++ RL D
Sbjct: 64 KGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKD 116
Score = 99 (39.9 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 24/69 (34%), Positives = 37/69 (53%)
Query: 196 AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQDT 255
AI EA + IP IVD+N +P+ + + +PGNDD A+ Y + +G+ QD
Sbjct: 172 AIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRS--QD- 228
Query: 256 LKLLSEKQE 264
L S+ +E
Sbjct: 229 --LASQAEE 235
>TIGR_CMR|SPO_1976 [details] [associations]
symbol:SPO_1976 "ribosomal protein S2" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
RefSeq:YP_167211.1 ProteinModelPortal:Q5LRZ4 SMR:Q5LRZ4
GeneID:3192960 KEGG:sil:SPO1976 PATRIC:23377283 Uniprot:Q5LRZ4
Length = 257
Score = 162 (62.1 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 37/109 (33%), Positives = 56/109 (51%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + +A VH GH+ + RM P+IYG R G I DL Q+ +L AL V + G
Sbjct: 8 MRQLLEAGVHFGHQTQRWNPRMSPFIYGARNGIHILDLTQTVPMLDQALKAVRDTVAKGG 67
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRL 177
VLFVG Q S I + A+ ++ W G TN + + +++ RL
Sbjct: 68 RVLFVGTKRQASGPIAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSIQRL 116
Score = 141 (54.7 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 196 AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
AI EA K+ IP V +VD+NC+P+ + Y +PGNDD AI YC + A L G A+
Sbjct: 173 AIAEANKLGIPVVAVVDTNCSPDGVDYIIPGNDDAARAISLYCDLAARAALDGMTAQ 229
>TIGR_CMR|DET_0377 [details] [associations]
symbol:DET_0377 "ribosomal protein S2" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
HSSP:P80371 RefSeq:YP_181123.1 ProteinModelPortal:Q3Z9H6
STRING:Q3Z9H6 GeneID:3230301 KEGG:det:DET0377 PATRIC:21607823
BioCyc:DETH243164:GJNF-377-MONOMER Uniprot:Q3Z9H6
Length = 245
Score = 152 (58.6 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 31/98 (31%), Positives = 51/98 (52%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+K++ +A H GH+ RMK YI+ R G I DL+++ +L A N++ + G
Sbjct: 6 IKELLEAGAHFGHQTSRWHPRMKKYIFTKRNGIHIIDLEKTVVMLDKACNYINQVVSEGG 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN 166
VLFVG Q ++ + A+ C + + W G+ TN
Sbjct: 66 KVLFVGTKKQAQEILAEEAKRCGMYFINQRWTGGILTN 103
Score = 143 (55.4 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 29/85 (34%), Positives = 47/85 (55%)
Query: 171 FRAVTRLPDXXXXXXXXXXXXEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDT 230
F+ +TRLPD + A+ EA +M +P V +VD+NCNP+ + YP+P NDD
Sbjct: 151 FKEMTRLPDVIFVVDPT----KEKIAMAEAKRMGVPLVAMVDTNCNPDEVDYPIPSNDDA 206
Query: 231 PSAIQYYCQVFKTAILKGKKAKQDT 255
AI+ C ++++ + A + T
Sbjct: 207 MRAIKLICSKMADSVIEAQNALKVT 231
>TIGR_CMR|BA_3965 [details] [associations]
symbol:BA_3965 "ribosomal protein S2" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591
PANTHER:PTHR12534 SUPFAM:SSF52313 TIGRFAMs:TIGR01011
HOGENOM:HOG000071892 eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299
RefSeq:NP_846208.1 RefSeq:YP_020604.1 RefSeq:YP_029929.1
ProteinModelPortal:Q81WK8 SMR:Q81WK8 DNASU:1086819
EnsemblBacteria:EBBACT00000009487 EnsemblBacteria:EBBACT00000014287
EnsemblBacteria:EBBACT00000024301 GeneID:1086819 GeneID:2820094
GeneID:2848104 KEGG:ban:BA_3965 KEGG:bar:GBAA_3965 KEGG:bat:BAS3678
OMA:SYIDRAY BioCyc:BANT260799:GJAJ-3736-MONOMER
BioCyc:BANT261594:GJ7F-3853-MONOMER Uniprot:Q81WK8
Length = 233
Score = 149 (57.5 bits), Expect = 6.5e-19, Sum P(2) = 6.5e-19
Identities = 33/115 (28%), Positives = 58/115 (50%)
Query: 65 NLVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIA 124
+++ +K + +A VH GH+ + +MK YI+ R G I DL ++ + + +A + IA
Sbjct: 2 SVISMKQLLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAFKVMRDIA 61
Query: 125 YRDGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPD 179
G +LFVG Q I++ A + + W G TN + + + + RL D
Sbjct: 62 AEGGDILFVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKD 116
Score = 124 (48.7 bits), Expect = 6.5e-19, Sum P(2) = 6.5e-19
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 196 AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAKQ 253
A+ EA K+ IP +GIVD+NC+P+ I + +P NDD A++ AIL+ K+ ++
Sbjct: 172 AVAEARKLHIPIIGIVDTNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEAKQGEE 229
>UNIPROTKB|P66537 [details] [associations]
symbol:rpsB "30S ribosomal protein S2" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0006412 GO:GO:0003735 EMBL:BX842581 GO:GO:0015935
HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
PIR:E70925 RefSeq:NP_217406.1 RefSeq:NP_337469.1
RefSeq:YP_006516343.1 ProteinModelPortal:P66537 SMR:P66537
PRIDE:P66537 EnsemblBacteria:EBMYCT00000003768
EnsemblBacteria:EBMYCT00000072764 GeneID:13317683 GeneID:887187
GeneID:925322 KEGG:mtc:MT2958 KEGG:mtu:Rv2890c KEGG:mtv:RVBD_2890c
PATRIC:18128274 TubercuList:Rv2890c Uniprot:P66537
Length = 287
Score = 142 (55.0 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 37/116 (31%), Positives = 56/116 (48%)
Query: 66 LVKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAY 125
+V +K + D+ H GH+ + +MK +I+ R G I DL Q+ + A FV
Sbjct: 3 VVTMKQLLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKETVA 62
Query: 126 RDGIVLFVG--QSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPD 179
G VLFVG + AQ S+ E T + + R W GM TN + + + RL +
Sbjct: 63 HGGSVLFVGTKKQAQESVAAEATRVG-MPYVNQR-WLGGMLTNFSTVHKRLQRLKE 116
Score = 137 (53.3 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 23/57 (40%), Positives = 39/57 (68%)
Query: 196 AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKAK 252
A+GEA K+ IP + I+D+NC+P+ + YP+PGNDD + +V +A+ +G +A+
Sbjct: 172 AVGEARKLGIPVIAILDTNCDPDEVDYPIPGNDDAIRSAALLTRVIASAVAEGLQAR 228
>UNIPROTKB|Q9KPV2 [details] [associations]
symbol:rpsB "30S ribosomal protein S2" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003735 GO:GO:0015935
HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 eggNOG:COG0052 KO:K02967
ProtClustDB:PRK05299 OMA:SYIDRAY PIR:C82097 RefSeq:NP_231891.1
ProteinModelPortal:Q9KPV2 SMR:Q9KPV2 PRIDE:Q9KPV2 DNASU:2613182
GeneID:2613182 KEGG:vch:VC2260 PATRIC:20083563 Uniprot:Q9KPV2
Length = 242
Score = 149 (57.5 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 33/113 (29%), Positives = 60/113 (53%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MK +I+G R I +L+++ + +AL +A + +
Sbjct: 4 VSMRDMLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKVGEK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPD 179
G VLFVG S +++ A ++ W GM TN + + +++ RL +
Sbjct: 64 KGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKE 116
Score = 109 (43.4 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 196 AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
AI EA + IP +VD+N +P+ + Y +PGNDD A+Q Y AI +G+
Sbjct: 172 AIKEANNLGIPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAAAQAINEGR 225
>TIGR_CMR|VC_2260 [details] [associations]
symbol:VC_2260 "ribosomal protein S2" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 eggNOG:COG0052 KO:K02967
ProtClustDB:PRK05299 OMA:SYIDRAY PIR:C82097 RefSeq:NP_231891.1
ProteinModelPortal:Q9KPV2 SMR:Q9KPV2 PRIDE:Q9KPV2 DNASU:2613182
GeneID:2613182 KEGG:vch:VC2260 PATRIC:20083563 Uniprot:Q9KPV2
Length = 242
Score = 149 (57.5 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 33/113 (29%), Positives = 60/113 (53%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++DM A VH GH+ + +MK +I+G R I +L+++ + +AL +A + +
Sbjct: 4 VSMRDMLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKVGEK 63
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKLFRAVTRLPD 179
G VLFVG S +++ A ++ W GM TN + + +++ RL +
Sbjct: 64 KGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKE 116
Score = 109 (43.4 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 196 AIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGK 249
AI EA + IP +VD+N +P+ + Y +PGNDD A+Q Y AI +G+
Sbjct: 172 AIKEANNLGIPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAAAQAINEGR 225
>SGD|S000000996 [details] [associations]
symbol:MRP4 "Mitochondrial ribosomal protein of the small
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0032543 "mitochondrial translation" evidence=IC] [GO:0005763
"mitochondrial small ribosomal subunit" evidence=IPI] [GO:0003735
"structural constituent of ribosome" evidence=IEA;IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0000049 "tRNA binding" evidence=ISS] InterPro:IPR001865
InterPro:IPR005706 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 SGD:S000000996 EMBL:BK006934
GO:GO:0003735 GO:GO:0032543 GO:GO:0000049 GO:GO:0005763 EMBL:U10555
InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 eggNOG:COG0052 KO:K02967
GeneTree:ENSGT00390000017382 OrthoDB:EOG4J14J1 EMBL:M82841
EMBL:AY558385 PIR:A42115 RefSeq:NP_011859.1
ProteinModelPortal:P32902 SMR:P32902 DIP:DIP-5035N IntAct:P32902
MINT:MINT-482507 STRING:P32902 PaxDb:P32902 PeptideAtlas:P32902
EnsemblFungi:YHL004W GeneID:856384 KEGG:sce:YHL004W CYGD:YHL004w
HOGENOM:HOG000248605 OMA:LNPTENR NextBio:981887
Genevestigator:P32902 GermOnline:YHL004W Uniprot:P32902
Length = 394
Score = 126 (49.4 bits), Expect = 5.8e-17, Sum P(3) = 5.8e-17
Identities = 26/71 (36%), Positives = 43/71 (60%)
Query: 192 EPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
E A+ EA K +PT+ I+D++ P+L+TYP+PGNDD+ ++ + V A G++
Sbjct: 327 ENRNALLEAIKSRVPTIAIIDTDSEPSLVTYPIPGNDDSLRSVNFLLGVLARA---GQRG 383
Query: 252 KQDTLKLLSEK 262
Q+ L +EK
Sbjct: 384 LQNRLARNNEK 394
Score = 123 (48.4 bits), Expect = 5.8e-17, Sum P(3) = 5.8e-17
Identities = 30/104 (28%), Positives = 49/104 (47%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ V+ + A VHLG + YIYG +G I DL+Q+ L+ A V ++
Sbjct: 183 ITVESLMSAGVHLGQSTSLWRSSTQSYIYGEYKGIHIIDLNQTLSYLKRAAKVVEGVSES 242
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKL 170
GI+LF+G +E+ A+ + + W G TNS ++
Sbjct: 243 GGIILFLGTRQGQKRGLEEAAKKTHGYYVSTRWIPGTLTNSTEI 286
Score = 59 (25.8 bits), Expect = 5.8e-17, Sum P(3) = 5.8e-17
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 23 KKLSTVPNVDPLPSTSNTESKDTSQEPEVPNPLRYHDYFQVRNLVKVKDMFDAK 76
K LS VP + LP + +D + E D+F RN + +FD+K
Sbjct: 59 KSLSQVPEDEILPELKKSLEQDKLSDKEQQLEAELSDFF--RNYALLNKLFDSK 110
>POMBASE|SPAC24C9.10c [details] [associations]
symbol:mrp4 "mitochondrial ribosomal protein subunit S2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000049
"tRNA binding" evidence=ISS] [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005763 "mitochondrial small ribosomal subunit" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0032543 "mitochondrial
translation" evidence=NAS] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 PomBase:SPAC24C9.10c EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0032543 GO:GO:0000049
GO:GO:0005763 InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 eggNOG:COG0052 KO:K02967 PIR:T38351
RefSeq:NP_594035.1 ProteinModelPortal:O13970 STRING:O13970
EnsemblFungi:SPAC24C9.10c.1 GeneID:2541569 KEGG:spo:SPAC24C9.10c
HOGENOM:HOG000209871 OMA:NTEARTS OrthoDB:EOG4J14J1 NextBio:20802663
Uniprot:O13970
Length = 263
Score = 135 (52.6 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 31/100 (31%), Positives = 54/100 (54%)
Query: 72 MFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVL 131
+ + HLGH + +P+IYG R+G I LDQ+ LR A++ V IA +GI+L
Sbjct: 53 LLSSGAHLGHSTSIWNPYTQPFIYGKREGIHIISLDQTMVYLRRAISVVRSIAKENGIIL 112
Query: 132 FVG-QSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKL 170
F+G ++ Q ++ A+ + + W G+ TN+ ++
Sbjct: 113 FIGTRNGQKDSVVA-AAKRARGYHIFDRWLPGLLTNAREV 151
Score = 110 (43.8 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 192 EPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDT 230
E A EA K +PT+GI+D++ +P ++TYP+P NDD+
Sbjct: 190 ENKSACLEAQKTHVPTIGIIDTDADPRMVTYPIPANDDS 228
>TAIR|locus:2096394 [details] [associations]
symbol:RPS2 "ribosomal protein S2" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS;TAS] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=ISS] [GO:0006412 "translation" evidence=IEA;ISS;TAS]
[GO:0006626 "protein targeting to mitochondrion" evidence=RCA]
[GO:0019408 "dolichol biosynthetic process" evidence=RCA]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0003735
EMBL:AC009327 GO:GO:0005763 InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 eggNOG:COG0052 EMBL:AF273102 EMBL:BT003049
EMBL:AY084362 IPI:IPI00517280 RefSeq:NP_187010.1 UniGene:At.18448
ProteinModelPortal:Q9GCB9 SMR:Q9GCB9 STRING:Q9GCB9 PaxDb:Q9GCB9
PRIDE:Q9GCB9 EnsemblPlants:AT3G03600.1 GeneID:821211
KEGG:ath:AT3G03600 TAIR:At3g03600 HOGENOM:HOG000120703
InParanoid:Q9GCB9 OMA:VANLAHM ProtClustDB:CLSN2684095
Genevestigator:Q9GCB9 GermOnline:AT3G03600 Uniprot:Q9GCB9
Length = 219
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 58/187 (31%), Positives = 85/187 (45%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
++ + + HLG + + + K Y YG R G I D D++ LR A +FVA++A+ G
Sbjct: 8 IQKLLNTGAHLGRR--AAEHHFKQYAYGTRNGMTIIDSDKTLICLRSAAHFVANLAHMRG 65
Query: 129 IVLFVGQSAQNSLLIEKTAQDCQ--EFAHTR---FWRQGMF-TNS--EKLFRAVTRL--- 177
+ FV + +IE T++ Q + H R W+ G F TNS K FR+ +
Sbjct: 66 NIFFVNTNPLFDEIIELTSRRIQGDSYNHNRAMNLWKMGGFLTNSYSPKKFRSRHKKLCF 125
Query: 178 -PDXXXXXXXXXXXXEPNPAIGEAAKMCIPTVGIVDSNCNPNL---ITYPVPGNDDTPSA 233
P + I EA+K+ IP V IVD N ITYPVP D
Sbjct: 126 GPTTMPDCVVVFDSERKSSVILEASKLQIPVVAIVDPNVPLEFFEKITYPVPARDSV-KF 184
Query: 234 IQYYCQV 240
+ +C V
Sbjct: 185 VYLFCNV 191
>ASPGD|ASPL0000014062 [details] [associations]
symbol:AN4251 species:162425 "Emericella nidulans"
[GO:0006412 "translation" evidence=IEA] [GO:0005763 "mitochondrial
small ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001865
InterPro:IPR005706 Pfam:PF00318 PRINTS:PR00395 GO:GO:0006412
EMBL:BN001302 GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591
PANTHER:PTHR12534 SUPFAM:SSF52313 TIGRFAMs:TIGR01011
HOGENOM:HOG000209871 EnsemblFungi:CADANIAT00004405 OMA:HECGLNN
Uniprot:C8V427
Length = 332
Score = 134 (52.2 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 29/95 (30%), Positives = 47/95 (49%)
Query: 76 KVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDGIVLFVGQ 135
+ HLGH + + YI+G+R+G I LD +A LR A V +A R G++LF G
Sbjct: 112 QTHLGHSTSRWNPQNSRYIFGIREGIHIISLDITAAYLRRAAKVVEEVAARGGLILFAGT 171
Query: 136 SAQNSLLIEKTAQDCQEFAHTRFWRQGMFTNSEKL 170
++ + A+ + + W G TN E++
Sbjct: 172 RPGQKRIVVRAAELSKGYHIFERWIPGSLTNGEQI 206
Score = 112 (44.5 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 192 EPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
E P + E +PT+GI+D++ +P +TYP+P NDD+ ++ V A G+K
Sbjct: 247 ENEPLLHECGLNNVPTIGIIDTDADPTRVTYPIPANDDSLRSVAVIAGVLGRAGQAGQKR 306
Query: 252 KQDTLK 257
+ + K
Sbjct: 307 RLEQAK 312
>UNIPROTKB|G4NGF2 [details] [associations]
symbol:MGG_04331 "37S ribosomal protein MRP4"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00963 GO:GO:0006412
GO:GO:0003735 EMBL:CM001236 GO:GO:0015935 InterPro:IPR023591
PANTHER:PTHR12534 SUPFAM:SSF52313 TIGRFAMs:TIGR01011 KO:K02967
RefSeq:XP_003719476.1 ProteinModelPortal:G4NGF2
EnsemblFungi:MGG_04331T0 GeneID:2677383 KEGG:mgr:MGG_04331
Uniprot:G4NGF2
Length = 398
Score = 128 (50.1 bits), Expect = 3.2e-13, Sum P(3) = 3.2e-13
Identities = 33/105 (31%), Positives = 52/105 (49%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
V ++ + ++ H+GH + +IYGVRQ I L+Q+A LR A V +A+
Sbjct: 137 VTLELLMASQCHMGHHKSLWNPANARFIYGVRQDIHIISLEQTAAHLRRAARLVEEVAFC 196
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHT-RFWRQGMFTNSEKL 170
G++LFVG + Q + I A + H W G TN ++L
Sbjct: 197 GGLILFVG-TRQGQMEIVTRAAELSRSCHLFNKWTPGTITNRDQL 240
Score = 97 (39.2 bits), Expect = 3.2e-13, Sum P(3) = 3.2e-13
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 192 EPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
E N + E IPT+G++D+N + +TYP+P NDD+ ++ V A G+K
Sbjct: 281 ENNILLHECKVSQIPTIGVIDTNADVTKVTYPIPANDDSLRSMAVIAGVLGRAGELGQKR 340
Query: 252 K 252
+
Sbjct: 341 R 341
Score = 46 (21.3 bits), Expect = 3.2e-13, Sum P(3) = 3.2e-13
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 26 STVPNVDPLPSTSNTESKDTSQEP-EVPNPL 55
++ P PLPST + TS P VP L
Sbjct: 46 ASTPLTHPLPSTGTATATATSAAPLAVPKVL 76
>UNIPROTKB|P0C480 [details] [associations]
symbol:rps2 "30S ribosomal protein S2, chloroplastic"
species:4530 "Oryza sativa" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0009536 GO:GO:0009570 GO:GO:0016020 GO:GO:0006412
EMBL:AY522331 GO:GO:0003735 GO:GO:0015935 HAMAP:MF_00291_B
InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 ProteinModelPortal:P0C480 SMR:P0C480
Gramene:P0C480 HOGENOM:HOG000071892 Genevestigator:P0C480
Uniprot:P0C480
Length = 236
Score = 118 (46.6 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 30/100 (30%), Positives = 48/100 (48%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K+M +A VH GH I + +M PYI R+G I +L ++ L +A + V A +
Sbjct: 8 INLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDLVFDAASQ 67
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN 166
L VG + + L+ A + + W GM TN
Sbjct: 68 GKSFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTN 107
Score = 108 (43.1 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 174 VTRLPDXXXXXXXXXXXXEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
+TRLPD A+ E A + IPT+ + D+NC+P+L +P NDDT ++
Sbjct: 158 MTRLPDIVIVLDQQKEYI----ALRECAILGIPTISLADTNCDPDLANISIPANDDTMTS 213
Query: 234 IQYYCQVFKTAILKGK 249
I+ AI +G+
Sbjct: 214 IRLILNKLVFAICEGR 229
>UNIPROTKB|P0C481 [details] [associations]
symbol:rps2 "30S ribosomal protein S2, chloroplastic"
species:39946 "Oryza sativa Indica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0009536 GO:GO:0009570 GO:GO:0016020
GO:GO:0006412 EMBL:AY522329 GO:GO:0003735 GO:GO:0015935
ProtClustDB:CHL00067 HAMAP:MF_00291_B InterPro:IPR023591
PANTHER:PTHR12534 SUPFAM:SSF52313 TIGRFAMs:TIGR01011
RefSeq:YP_654209.2 ProteinModelPortal:P0C481 SMR:P0C481
PRIDE:P0C481 GeneID:4126925 Gramene:P0C481 Uniprot:P0C481
Length = 236
Score = 118 (46.6 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 30/100 (30%), Positives = 48/100 (48%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K+M +A VH GH I + +M PYI R+G I +L ++ L +A + V A +
Sbjct: 8 INLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDLVFDAASQ 67
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN 166
L VG + + L+ A + + W GM TN
Sbjct: 68 GKSFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTN 107
Score = 108 (43.1 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 174 VTRLPDXXXXXXXXXXXXEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
+TRLPD A+ E A + IPT+ + D+NC+P+L +P NDDT ++
Sbjct: 158 MTRLPDIVIVLDQQKEYI----ALRECAILGIPTISLADTNCDPDLANISIPANDDTMTS 213
Query: 234 IQYYCQVFKTAILKGK 249
I+ AI +G+
Sbjct: 214 IRLILNKLVFAICEGR 229
>UNIPROTKB|P0C482 [details] [associations]
symbol:rps2 "30S ribosomal protein S2, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0009536 GO:GO:0009570 GO:GO:0016020
GO:GO:0006412 EMBL:X15901 EMBL:AY522330 GenomeReviews:AY522330_GR
GO:GO:0003735 GO:GO:0015935 ProtClustDB:CHL00067 HAMAP:MF_00291_B
InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 PIR:JQ0216 RefSeq:NP_039376.1
ProteinModelPortal:P0C482 SMR:P0C482 STRING:P0C482
EnsemblPlants:LOC_Os02g24612.1 EnsemblPlants:LOC_Os10g38278.1
EnsemblPlants:LOC_Osp1g00270.1 GeneID:3131442 KEGG:osa:3131442
Gramene:P0C482 eggNOG:COG0052 KO:K02967 OMA:NVAGGTD Uniprot:P0C482
Length = 236
Score = 118 (46.6 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 30/100 (30%), Positives = 48/100 (48%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K+M +A VH GH I + +M PYI R+G I +L ++ L +A + V A +
Sbjct: 8 INLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDLVFDAASQ 67
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN 166
L VG + + L+ A + + W GM TN
Sbjct: 68 GKSFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTN 107
Score = 108 (43.1 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 174 VTRLPDXXXXXXXXXXXXEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
+TRLPD A+ E A + IPT+ + D+NC+P+L +P NDDT ++
Sbjct: 158 MTRLPDIVIVLDQQKEYI----ALRECAILGIPTISLADTNCDPDLANISIPANDDTMTS 213
Query: 234 IQYYCQVFKTAILKGK 249
I+ AI +G+
Sbjct: 214 IRLILNKLVFAICEGR 229
>UNIPROTKB|Q6ENI1 [details] [associations]
symbol:rps2 "30S ribosomal protein S2, chloroplastic"
species:4536 "Oryza nivara" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0009507 GO:GO:0009536 GO:GO:0006412 GO:GO:0003735
EMBL:AP006728 GO:GO:0015935 RefSeq:YP_052742.1
ProteinModelPortal:Q6ENI1 SMR:Q6ENI1 GeneID:2885954 Gramene:Q6ENI1
ProtClustDB:CHL00067 HAMAP:MF_00291_B InterPro:IPR023591
PANTHER:PTHR12534 SUPFAM:SSF52313 TIGRFAMs:TIGR01011 Uniprot:Q6ENI1
Length = 236
Score = 118 (46.6 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 30/100 (30%), Positives = 48/100 (48%)
Query: 67 VKVKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYR 126
+ +K+M +A VH GH I + +M PYI R+G I +L ++ L +A + V A +
Sbjct: 8 INLKEMIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDLVFDAASQ 67
Query: 127 DGIVLFVGQSAQNSLLIEKTAQDCQEFAHTRFWRQGMFTN 166
L VG + + L+ A + + W GM TN
Sbjct: 68 GKSFLIVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTN 107
Score = 108 (43.1 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 174 VTRLPDXXXXXXXXXXXXEPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSA 233
+TRLPD A+ E A + IPT+ + D+NC+P+L +P NDDT ++
Sbjct: 158 MTRLPDIVIVLDQQKEYI----ALRECAILGIPTISLADTNCDPDLANISIPANDDTMTS 213
Query: 234 IQYYCQVFKTAILKGK 249
I+ AI +G+
Sbjct: 214 IRLILNKLVFAICEGR 229
>CGD|CAL0001448 [details] [associations]
symbol:orf19.5747 species:5476 "Candida albicans" [GO:0005763
"mitochondrial small ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00963 CGD:CAL0001448
GO:GO:0006412 GO:GO:0003735 EMBL:AACQ01000046 EMBL:AACQ01000047
GO:GO:0015935 InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 eggNOG:COG0052 KO:K02967 RefSeq:XP_718017.1
RefSeq:XP_718083.1 ProteinModelPortal:Q5A8K1 STRING:Q5A8K1
GeneID:3640303 GeneID:3640369 KEGG:cal:CaO19.13170
KEGG:cal:CaO19.5747 Uniprot:Q5A8K1
Length = 460
Score = 125 (49.1 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 69 VKDMFDAKVHLGHKIGSLDERMKPYIYGVRQGQIIFDLDQSAELLRDALNFVAHIAYRDG 128
+ + A HLGH S M+P+IYG+ I DL+++ E L A + + + G
Sbjct: 238 IAKLMAAGCHLGHSTSSFRPSMQPFIYGIYDKVHIIDLNKTLEKLTLACKVIEGVVEKGG 297
Query: 129 IVLFVGQSAQNSLLIE---KTAQDCQEFAHTRFWRQGMFTN 166
+VL+VG NS + E K ++ + + W G TN
Sbjct: 298 VVLYVGTHKNNSSIQEALVKASERSHGYYVNKRWIPGTITN 338
Score = 106 (42.4 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 192 EPNPAIGEAAKMCIPTVGIVDSNCNPNLITYPVPGNDDTPSAIQYYCQVFKTAILKGKKA 251
E I E IPT+G+ D++ P+L+TYP+P NDD+ ++ + + G +
Sbjct: 383 ENRNCIKECISAGIPTIGLCDTDMEPSLLTYPIPCNDDSVRSVNLMLGIMSKSAESGLQK 442
Query: 252 KQDTLKLLSE 261
+ +K L E
Sbjct: 443 RISAVKKLEE 452
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 268 256 0.00086 114 3 11 22 0.45 33
32 0.48 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 36
No. of states in DFA: 604 (64 KB)
Total size of DFA: 193 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.52u 0.08s 22.60t Elapsed: 00:00:05
Total cpu time: 22.52u 0.08s 22.60t Elapsed: 00:00:05
Start: Thu Aug 15 16:08:48 2013 End: Thu Aug 15 16:08:53 2013