AmiGO: BLAST Results


BLAST match view associations BLAST with CLPX CLPX CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial	protein from Homo sapiens	3.6e-11
BLAST match view associations BLAST with clpxa clpxa clpxa ClpX caseinolytic peptidase X homolog a	gene_product from Danio rerio	1.2e-10
BLAST match view associations BLAST with CLPX CLPX CLPX Uncharacterized protein	protein from Bos taurus	2.6e-10
BLAST match view associations BLAST with LOC100151784 LOC100151784 LOC100151784 Uncharacterized protein	protein from Sus scrofa	2.7e-10
BLAST match view associations BLAST with CLPX CLPX CLPX Uncharacterized protein	protein from Canis lupus familiaris	2.7e-10
BLAST match view associations BLAST with CLPX CLPX CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial	protein from Homo sapiens	2.7e-10
BLAST match view associations BLAST with Clpx Clpx Clpx ClpX caseinolytic peptidase X homolog (E. coli)	gene from Rattus norvegicus	2.7e-10
BLAST match view associations BLAST with Clpx Clpx Clpx caseinolytic peptidase X (E.coli)	protein from Mus musculus	2.7e-10
BLAST match view associations BLAST with CLPX CLPX CLPX Uncharacterized protein	protein from Gallus gallus	7.1e-10
BLAST match view associations BLAST with CLPX CLPX CLPX Uncharacterized protein	protein from Gallus gallus	7.3e-10
BLAST match view associations BLAST with CG4538 CG4538 CG4538	protein from Drosophila melanogaster	3.6e-09
BLAST match view associations BLAST with K07A3.3 K07A3.3 K07A3.3	gene from Caenorhabditis elegans	4.7e-08
BLAST match view associations BLAST with clpX clpX clpX ATP-dependent Clp protease ATP-binding subunit ClpX	protein from Vibrio cholerae O1 biovar El Tor str. N16961	9.2e-08
BLAST match view associations BLAST with VC_1921 VC_1921 VC_1921 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Vibrio cholerae O1 biovar El Tor	9.2e-08
BLAST match view associations BLAST with APH_0969 APH_0969 APH_0969 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Anaplasma phagocytophilum str. HZ	2.4e-07
BLAST match view associations BLAST with CLPX CLPX CLPX CLP protease regulatory subunit X	protein from Arabidopsis thaliana	2.4e-07
BLAST match view associations BLAST with ECH_0900 ECH_0900 ECH_0900 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Ehrlichia chaffeensis str. Arkansas	3.8e-07
BLAST match view associations BLAST with CBU_0739 CBU_0739 CBU_0739 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Coxiella burnetii RSA 493	4.1e-07
BLAST match view associations BLAST with CPS_3784 CPS_3784 CPS_3784 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Colwellia psychrerythraea 34H	6.7e-07
BLAST match view associations BLAST with AT1G33360 AT1G33360 AT1G33360	protein from Arabidopsis thaliana	1.0e-06
BLAST match view associations BLAST with AT5G49840 AT5G49840 AT5G49840	protein from Arabidopsis thaliana	1.5e-06
BLAST match view associations BLAST with CHY_0326 CHY_0326 CHY_0326 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Carboxydothermus hydrogenoformans Z-2901	2.3e-06
BLAST match view associations BLAST with CJE_0324 CJE_0324 CJE_0324 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Campylobacter jejuni RM1221	4.6e-06
BLAST match view associations BLAST with BA_4704 BA_4704 BA_4704 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Bacillus anthracis str. Ames	4.9e-06
BLAST match view associations BLAST with clpX clpX clpX ClpX	protein from Escherichia coli K-12	6.3e-06
BLAST match view associations BLAST with SO_1795 SO_1795 SO_1795 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Shewanella oneidensis MR-1	1.1e-05
BLAST match view associations BLAST with GSU_1791 GSU_1791 GSU_1791 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Geobacter sulfurreducens PCA	1.3e-05
BLAST match view associations BLAST with D2030.2 D2030.2 D2030.2	gene from Caenorhabditis elegans	2.1e-05
BLAST match view associations BLAST with clpX clpX clpX ATP-dependent Clp protease ATP-binding subunit ClpX	protein from Caulobacter crescentus CB15	2.8e-05
BLAST match view associations BLAST with clpX clpX clpX ATP-dependent Clp protease ATP-binding subunit ClpX	protein from Mycobacterium tuberculosis	7.7e-05
BLAST match view associations BLAST with MCX1 MCX1 MCX1 Mitochondrial matrix protein	gene from Saccharomyces cerevisiae	8.0e-05
BLAST match view associations BLAST with NSE_0753 NSE_0753 NSE_0753 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Neorickettsia sennetsu str. Miyayama	0.00031
BLAST match view associations BLAST with SPO_1004 SPO_1004 SPO_1004 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Ruegeria pomeroyi DSS-3	0.00056

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy13428
        (67 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|H0YM48 - symbol:CLPX "ATP-dependent Clp proteas...   156  3.6e-11   1
ZFIN|ZDB-GENE-040912-143 - symbol:clpx "ClpX caseinolytic...   159  1.2e-10   1
UNIPROTKB|F1N155 - symbol:CLPX "Uncharacterized protein" ...   156  2.6e-10   1
UNIPROTKB|F1SJL5 - symbol:CLPX "Uncharacterized protein" ...   156  2.7e-10   1
UNIPROTKB|E2QSS3 - symbol:CLPX "Uncharacterized protein" ...   156  2.7e-10   1
UNIPROTKB|O76031 - symbol:CLPX "ATP-dependent Clp proteas...   156  2.7e-10   1
RGD|1304883 - symbol:Clpx "ClpX caseinolytic peptidase X ...   156  2.7e-10   1
UNIPROTKB|Q5U2U0 - symbol:Clpx "ATP-dependent Clp proteas...   156  2.7e-10   1
MGI|MGI:1346017 - symbol:Clpx "caseinolytic peptidase X (...   156  2.7e-10   1
UNIPROTKB|E1BX77 - symbol:CLPX "Uncharacterized protein" ...   152  7.1e-10   1
UNIPROTKB|F1NA92 - symbol:CLPX "Uncharacterized protein" ...   152  7.3e-10   1
FB|FBgn0038745 - symbol:CG4538 species:7227 "Drosophila m...   146  3.6e-09   1
WB|WBGene00019461 - symbol:K07A3.3 species:6239 "Caenorha...   134  4.7e-08   1
UNIPROTKB|Q9KQS7 - symbol:clpX "ATP-dependent Clp proteas...   130  9.2e-08   1
TIGR_CMR|VC_1921 - symbol:VC_1921 "ATP-dependent Clp prot...   130  9.2e-08   1
TIGR_CMR|APH_0969 - symbol:APH_0969 "ATP-dependent Clp pr...   126  2.4e-07   1
TAIR|locus:2154257 - symbol:CLPX "CLP protease regulatory...   128  2.4e-07   1
TIGR_CMR|ECH_0900 - symbol:ECH_0900 "ATP-dependent Clp pr...   124  3.8e-07   1
TIGR_CMR|CBU_0739 - symbol:CBU_0739 "ATP-dependent Clp pr...   124  4.1e-07   1
TIGR_CMR|CPS_3784 - symbol:CPS_3784 "ATP-dependent Clp pr...   122  6.7e-07   1
TAIR|locus:2006942 - symbol:AT1G33360 species:3702 "Arabi...   123  1.0e-06   1
TAIR|locus:2155446 - symbol:AT5G49840 species:3702 "Arabi...   121  1.5e-06   1
TIGR_CMR|CHY_0326 - symbol:CHY_0326 "ATP-dependent Clp pr...   117  2.3e-06   1
ASPGD|ASPL0000057717 - symbol:AN0349 species:162425 "Emer...   119  2.5e-06   1
TIGR_CMR|CJE_0324 - symbol:CJE_0324 "ATP-dependent Clp pr...   114  4.6e-06   1
TIGR_CMR|BA_4704 - symbol:BA_4704 "ATP-dependent Clp prot...   114  4.9e-06   1
UNIPROTKB|P0A6H1 - symbol:clpX "ClpX" species:83333 "Esch...   113  6.3e-06   1
TIGR_CMR|SO_1795 - symbol:SO_1795 "ATP-dependent Clp prot...   111  1.1e-05   1
TIGR_CMR|GSU_1791 - symbol:GSU_1791 "ATP-dependent Clp pr...   110  1.3e-05   1
WB|WBGene00008412 - symbol:D2030.2 species:6239 "Caenorha...   110  2.1e-05   1
UNIPROTKB|P0CAU2 - symbol:clpX "ATP-dependent Clp proteas...   107  2.8e-05   1
UNIPROTKB|P0A528 - symbol:clpX "ATP-dependent Clp proteas...   103  7.7e-05   1
SGD|S000000431 - symbol:MCX1 "Mitochondrial matrix protei...   104  8.0e-05   1
TIGR_CMR|NSE_0753 - symbol:NSE_0753 "ATP-dependent Clp pr...    97  0.00031   1
TIGR_CMR|SPO_1004 - symbol:SPO_1004 "ATP-dependent Clp pr...    95  0.00056   1


>UNIPROTKB|H0YM48 [details] [associations]
            symbol:CLPX "ATP-dependent Clp protease ATP-binding subunit
            clpX-like, mitochondrial" species:9606 "Homo sapiens" [GO:0005524
            "ATP binding" evidence=IEA] [GO:0006457 "protein folding"
            evidence=IEA] [GO:0051082 "unfolded protein binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
            InterPro:IPR004487 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006457 EMBL:AC068213 PANTHER:PTHR11262:SF4 HGNC:HGNC:2088
            EMBL:AC013553 ProteinModelPortal:H0YM48 SMR:H0YM48
            Ensembl:ENST00000559152 Bgee:H0YM48 Uniprot:H0YM48
        Length = 268

 Score = 156 (60.0 bits), Expect = 3.6e-11, P = 3.6e-11
 Identities = 30/35 (85%), Positives = 32/35 (91%)

Query:     7 KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYNNI 41
             KIY YL+K+VVGQ  AKKVLSVAVYNHYKRIYNNI
Sbjct:   171 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNI 205


>ZFIN|ZDB-GENE-040912-143 [details] [associations]
            symbol:clpx "ClpX caseinolytic peptidase X homolog
            (E. coli)" species:7955 "Danio rerio" [GO:0051082 "unfolded protein
            binding" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
            ZFIN:ZDB-GENE-040912-143 GO:GO:0005524 GO:GO:0006457 GO:GO:0017111
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
            HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4 CTD:10845
            HOVERGEN:HBG004940 OrthoDB:EOG46DM2G EMBL:BC081643 IPI:IPI00494396
            RefSeq:NP_001004581.1 UniGene:Dr.4306 ProteinModelPortal:Q66HW5
            STRING:Q66HW5 GeneID:447842 KEGG:dre:447842 NextBio:20832363
            ArrayExpress:Q66HW5 Bgee:Q66HW5 Uniprot:Q66HW5
        Length = 610

 Score = 159 (61.0 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 29/35 (82%), Positives = 34/35 (97%)

Query:     7 KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYNNI 41
             KI+ YL+K+VVGQ+HAKKVLSVAVYNHYKRIYNN+
Sbjct:   160 KIFAYLDKYVVGQDHAKKVLSVAVYNHYKRIYNNM 194


>UNIPROTKB|F1N155 [details] [associations]
            symbol:CLPX "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0051603 "proteolysis involved in cellular protein
            catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
            nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
            evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
            evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
            activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
            evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
            Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
            GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
            GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:DAAA02027858
            EMBL:DAAA02027859 EMBL:DAAA02027860 IPI:IPI00696713
            Ensembl:ENSBTAT00000011038 Uniprot:F1N155
        Length = 607

 Score = 156 (60.0 bits), Expect = 2.6e-10, P = 2.6e-10
 Identities = 30/35 (85%), Positives = 32/35 (91%)

Query:     7 KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYNNI 41
             KIY YL+K+VVGQ  AKKVLSVAVYNHYKRIYNNI
Sbjct:   145 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNI 179


>UNIPROTKB|F1SJL5 [details] [associations]
            symbol:CLPX "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0051603 "proteolysis involved in cellular protein
            catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
            nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
            evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
            evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
            activity" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
            [GO:0051082 "unfolded protein binding" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
            Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
            GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
            GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:CU856492
            Ensembl:ENSSSCT00000005437 Uniprot:F1SJL5
        Length = 619

 Score = 156 (60.0 bits), Expect = 2.7e-10, P = 2.7e-10
 Identities = 30/35 (85%), Positives = 32/35 (91%)

Query:     7 KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYNNI 41
             KIY YL+K+VVGQ  AKKVLSVAVYNHYKRIYNNI
Sbjct:   171 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNI 205


>UNIPROTKB|E2QSS3 [details] [associations]
            symbol:CLPX "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0051603 "proteolysis involved in cellular
            protein catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
            nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
            evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
            evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
            activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
            evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
            Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
            GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 KO:K03544 PANTHER:PTHR11262:SF4 CTD:10845 OMA:KSIIKEP
            GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:AAEX03016215
            RefSeq:XP_852508.1 Ensembl:ENSCAFT00000027135 GeneID:609344
            KEGG:cfa:609344 NextBio:20894946 Uniprot:E2QSS3
        Length = 633

 Score = 156 (60.0 bits), Expect = 2.7e-10, P = 2.7e-10
 Identities = 30/35 (85%), Positives = 32/35 (91%)

Query:     7 KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYNNI 41
             KIY YL+K+VVGQ  AKKVLSVAVYNHYKRIYNNI
Sbjct:   171 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNI 205


>UNIPROTKB|O76031 [details] [associations]
            symbol:CLPX "ATP-dependent Clp protease ATP-binding subunit
            clpX-like, mitochondrial" species:9606 "Homo sapiens" [GO:0006457
            "protein folding" evidence=IEA] [GO:0051082 "unfolded protein
            binding" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
            evidence=IDA] [GO:0016504 "peptidase activator activity"
            evidence=IDA] [GO:0005739 "mitochondrion" evidence=NAS;IDA]
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0005743 "mitochondrial
            inner membrane" evidence=ISS] [GO:0016887 "ATPase activity"
            evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0004176 "ATP-dependent peptidase activity" evidence=IDA]
            [GO:0051603 "proteolysis involved in cellular protein catabolic
            process" evidence=IDA] [GO:0042645 "mitochondrial nucleoid"
            evidence=IDA] [GO:0010952 "positive regulation of peptidase
            activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006457 GO:GO:0005743
            GO:GO:0046872 GO:GO:0016504 GO:GO:0016887 GO:GO:0042645
            EMBL:CH471082 GO:GO:0051603 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:AJ006267
            EMBL:AJ276980 EMBL:AJ276981 EMBL:AJ276966 EMBL:AJ276967
            EMBL:AJ276968 EMBL:AJ276969 EMBL:AJ276970 EMBL:AJ276971
            EMBL:AJ276972 EMBL:AJ276973 EMBL:AJ276974 EMBL:AJ276975
            EMBL:AJ276976 EMBL:AJ276977 EMBL:AK292316 EMBL:BC130373
            EMBL:BC136487 IPI:IPI00008728 RefSeq:NP_006651.2 UniGene:Hs.113823
            ProteinModelPortal:O76031 SMR:O76031 IntAct:O76031
            MINT:MINT-3002168 STRING:O76031 PhosphoSite:O76031 PaxDb:O76031
            PeptideAtlas:O76031 PRIDE:O76031 Ensembl:ENST00000300107
            GeneID:10845 KEGG:hsa:10845 UCSC:uc002aom.3 CTD:10845
            GeneCards:GC15M065440 HGNC:HGNC:2088 HPA:HPA040262
            neXtProt:NX_O76031 PharmGKB:PA26614 HOVERGEN:HBG004940
            InParanoid:O76031 OMA:KSIIKEP OrthoDB:EOG46DM2G PhylomeDB:O76031
            GenomeRNAi:10845 NextBio:41174 ArrayExpress:O76031 Bgee:O76031
            CleanEx:HS_CLPX Genevestigator:O76031 GermOnline:ENSG00000166855
            GO:GO:0009841 Uniprot:O76031
        Length = 633

 Score = 156 (60.0 bits), Expect = 2.7e-10, P = 2.7e-10
 Identities = 30/35 (85%), Positives = 32/35 (91%)

Query:     7 KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYNNI 41
             KIY YL+K+VVGQ  AKKVLSVAVYNHYKRIYNNI
Sbjct:   171 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNI 205


>RGD|1304883 [details] [associations]
            symbol:Clpx "ClpX caseinolytic peptidase X homolog (E. coli)"
            species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0004176 "ATP-dependent peptidase activity"
            evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA;ISO]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
            evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=ISO]
            [GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO]
            [GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006457
            "protein folding" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009841 "mitochondrial endopeptidase Clp complex"
            evidence=IEA;ISO] [GO:0010952 "positive regulation of peptidase
            activity" evidence=ISO] [GO:0016504 "peptidase activator activity"
            evidence=IEA;ISO] [GO:0016887 "ATPase activity" evidence=ISO]
            [GO:0042645 "mitochondrial nucleoid" evidence=IEA;ISO] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0051082 "unfolded protein
            binding" evidence=IEA] [GO:0051603 "proteolysis involved in
            cellular protein catabolic process" evidence=IEA;ISO] [GO:0005730
            "nucleolus" evidence=ISO] InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 RGD:1304883
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006457 GO:GO:0005743
            GO:GO:0046872 GO:GO:0016504 GO:GO:0042645 GO:GO:0051603
            GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4
            TIGRFAMs:TIGR00382 CTD:10845 HOVERGEN:HBG004940 OMA:KSIIKEP
            OrthoDB:EOG46DM2G GO:GO:0009841 GeneTree:ENSGT00390000017625
            EMBL:BC085867 IPI:IPI00196478 RefSeq:NP_001007804.1
            UniGene:Rn.203913 HSSP:O25926 ProteinModelPortal:Q5U2U0 SMR:Q5U2U0
            STRING:Q5U2U0 PhosphoSite:Q5U2U0 PRIDE:Q5U2U0
            Ensembl:ENSRNOT00000048302 GeneID:300786 KEGG:rno:300786
            UCSC:RGD:1304883 InParanoid:Q5U2U0 NextBio:647505
            ArrayExpress:Q5U2U0 Genevestigator:Q5U2U0 Uniprot:Q5U2U0
        Length = 633

 Score = 156 (60.0 bits), Expect = 2.7e-10, P = 2.7e-10
 Identities = 30/35 (85%), Positives = 32/35 (91%)

Query:     7 KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYNNI 41
             KIY YL+K+VVGQ  AKKVLSVAVYNHYKRIYNNI
Sbjct:   171 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNI 205


>UNIPROTKB|Q5U2U0 [details] [associations]
            symbol:Clpx "ATP-dependent Clp protease ATP-binding subunit
            clpX-like, mitochondrial" species:10116 "Rattus norvegicus"
            [GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
            evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
            [GO:0009841 "mitochondrial endopeptidase Clp complex" evidence=IEA]
            [GO:0016504 "peptidase activator activity" evidence=IEA]
            [GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0051082
            "unfolded protein binding" evidence=IEA] [GO:0051603 "proteolysis
            involved in cellular protein catabolic process" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
            Pfam:PF07724 SMART:SM00382 RGD:1304883 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006457 GO:GO:0005743 GO:GO:0046872 GO:GO:0016504
            GO:GO:0042645 GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489
            Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
            KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 CTD:10845
            HOVERGEN:HBG004940 OMA:KSIIKEP OrthoDB:EOG46DM2G GO:GO:0009841
            GeneTree:ENSGT00390000017625 EMBL:BC085867 IPI:IPI00196478
            RefSeq:NP_001007804.1 UniGene:Rn.203913 HSSP:O25926
            ProteinModelPortal:Q5U2U0 SMR:Q5U2U0 STRING:Q5U2U0
            PhosphoSite:Q5U2U0 PRIDE:Q5U2U0 Ensembl:ENSRNOT00000048302
            GeneID:300786 KEGG:rno:300786 UCSC:RGD:1304883 InParanoid:Q5U2U0
            NextBio:647505 ArrayExpress:Q5U2U0 Genevestigator:Q5U2U0
            Uniprot:Q5U2U0
        Length = 633

 Score = 156 (60.0 bits), Expect = 2.7e-10, P = 2.7e-10
 Identities = 30/35 (85%), Positives = 32/35 (91%)

Query:     7 KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYNNI 41
             KIY YL+K+VVGQ  AKKVLSVAVYNHYKRIYNNI
Sbjct:   171 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNI 205


>MGI|MGI:1346017 [details] [associations]
            symbol:Clpx "caseinolytic peptidase X (E.coli)"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005524 "ATP binding" evidence=IDA] [GO:0005739 "mitochondrion"
            evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
            evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
            [GO:0006457 "protein folding" evidence=IEA] [GO:0009841
            "mitochondrial endopeptidase Clp complex" evidence=ISO] [GO:0010952
            "positive regulation of peptidase activity" evidence=ISO]
            [GO:0016504 "peptidase activator activity" evidence=ISO]
            [GO:0016887 "ATPase activity" evidence=IDA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0042645
            "mitochondrial nucleoid" evidence=ISO] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0051082 "unfolded protein binding"
            evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
            catabolic process" evidence=ISO] InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
            MGI:MGI:1346017 GO:GO:0005524 GO:GO:0005634 GO:GO:0006457
            GO:GO:0005743 GO:GO:0046872 GO:GO:0016504 GO:GO:0016887
            GO:GO:0042645 GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489
            Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
            KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 CTD:10845
            HOVERGEN:HBG004940 OMA:KSIIKEP OrthoDB:EOG46DM2G GO:GO:0009841
            EMBL:AJ276991 EMBL:AF134983 EMBL:AC110235 IPI:IPI00119808
            RefSeq:NP_035932.2 UniGene:Mm.30088 ProteinModelPortal:Q9JHS4
            SMR:Q9JHS4 STRING:Q9JHS4 PhosphoSite:Q9JHS4 PaxDb:Q9JHS4
            PRIDE:Q9JHS4 Ensembl:ENSMUST00000015501 GeneID:270166
            KEGG:mmu:270166 UCSC:uc009qdb.1 GeneTree:ENSGT00390000017625
            InParanoid:Q9JHS4 ChiTaRS:CLPX NextBio:393279 Bgee:Q9JHS4
            CleanEx:MM_CLPX Genevestigator:Q9JHS4 GermOnline:ENSMUSG00000015357
            Uniprot:Q9JHS4
        Length = 634

 Score = 156 (60.0 bits), Expect = 2.7e-10, P = 2.7e-10
 Identities = 30/35 (85%), Positives = 32/35 (91%)

Query:     7 KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYNNI 41
             KIY YL+K+VVGQ  AKKVLSVAVYNHYKRIYNNI
Sbjct:   172 KIYNYLDKYVVGQSFAKKVLSVAVYNHYKRIYNNI 206


>UNIPROTKB|E1BX77 [details] [associations]
            symbol:CLPX "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0006457 "protein folding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0051082
            "unfolded protein binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
            GO:GO:0006457 GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 PANTHER:PTHR11262:SF4 GeneTree:ENSGT00390000017625
            EMBL:AADN02038940 IPI:IPI00820856 Ensembl:ENSGALT00000038419
            ArrayExpress:E1BX77 Uniprot:E1BX77
        Length = 617

 Score = 152 (58.6 bits), Expect = 7.1e-10, P = 7.1e-10
 Identities = 30/35 (85%), Positives = 32/35 (91%)

Query:     7 KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYNNI 41
             KIY YL+K+VVGQ  AKKVLSVAVYNHYKRIYNNI
Sbjct:   168 KIYNYLDKYVVGQCFAKKVLSVAVYNHYKRIYNNI 202


>UNIPROTKB|F1NA92 [details] [associations]
            symbol:CLPX "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0006457 "protein folding" evidence=IEA] [GO:0051082
            "unfolded protein binding" evidence=IEA] [GO:0004176 "ATP-dependent
            peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005743
            "mitochondrial inner membrane" evidence=IEA] [GO:0009841
            "mitochondrial endopeptidase Clp complex" evidence=IEA] [GO:0016504
            "peptidase activator activity" evidence=IEA] [GO:0042645
            "mitochondrial nucleoid" evidence=IEA] [GO:0051603 "proteolysis
            involved in cellular protein catabolic process" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
            Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
            GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
            GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
            GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:AADN02038940
            IPI:IPI00651275 Ensembl:ENSGALT00000011804 ArrayExpress:F1NA92
            Uniprot:F1NA92
        Length = 630

 Score = 152 (58.6 bits), Expect = 7.3e-10, P = 7.3e-10
 Identities = 30/35 (85%), Positives = 32/35 (91%)

Query:     7 KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYNNI 41
             KIY YL+K+VVGQ  AKKVLSVAVYNHYKRIYNNI
Sbjct:   168 KIYNYLDKYVVGQCFAKKVLSVAVYNHYKRIYNNI 202


>FB|FBgn0038745 [details] [associations]
            symbol:CG4538 species:7227 "Drosophila melanogaster"
            [GO:0005739 "mitochondrion" evidence=ISS] [GO:0009368
            "endopeptidase Clp complex" evidence=ISS] [GO:0004252 "serine-type
            endopeptidase activity" evidence=ISS] [GO:0006508 "proteolysis"
            evidence=ISS] [GO:0006457 "protein folding" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0051082 "unfolded
            protein binding" evidence=IEA] InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
            EMBL:AE014297 GO:GO:0005524 GO:GO:0006457 GO:GO:0017111
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
            KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
            GeneTree:ENSGT00390000017625 HSSP:O25926 RefSeq:NP_732463.1
            UniGene:Dm.2399 ProteinModelPortal:Q8IN64 SMR:Q8IN64 STRING:Q8IN64
            PaxDb:Q8IN64 PRIDE:Q8IN64 EnsemblMetazoa:FBtr0083856 GeneID:42369
            KEGG:dme:Dmel_CG4538 UCSC:CG4538-RB FlyBase:FBgn0038745
            InParanoid:Q8IN64 OrthoDB:EOG4RBP0W GenomeRNAi:42369 NextBio:828465
            ArrayExpress:Q8IN64 Bgee:Q8IN64 Uniprot:Q8IN64
        Length = 673

 Score = 146 (56.5 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 27/35 (77%), Positives = 33/35 (94%)

Query:     7 KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYNNI 41
             KI EYL+KHVVGQ+ AKKVL+VAVYNHYKRI++N+
Sbjct:   194 KIMEYLDKHVVGQDFAKKVLAVAVYNHYKRIHHNL 228


>WB|WBGene00019461 [details] [associations]
            symbol:K07A3.3 species:6239 "Caenorhabditis elegans"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
            Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006457
            GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            eggNOG:COG1219 HOGENOM:HOG000010093 PANTHER:PTHR11262:SF4
            GeneTree:ENSGT00390000017625 EMBL:FO080962 GeneID:171817
            KEGG:cel:CELE_K07A3.3 CTD:171817 RefSeq:NP_001021562.1
            ProteinModelPortal:Q65XY4 SMR:Q65XY4 STRING:Q65XY4 PRIDE:Q65XY4
            EnsemblMetazoa:K07A3.3b UCSC:K07A3.3b WormBase:K07A3.3b
            InParanoid:Q65XY4 OMA:PFHCLDK NextBio:872825 ArrayExpress:Q65XY4
            Uniprot:Q65XY4
        Length = 518

 Score = 134 (52.2 bits), Expect = 4.7e-08, P = 4.7e-08
 Identities = 25/41 (60%), Positives = 35/41 (85%)

Query:     2 ILVNPK-IYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYNNI 41
             ++++PK I E+LNK+VVGQE AKK L+VAVY HY+R+ NN+
Sbjct:    97 LILHPKEIVEHLNKYVVGQEEAKKYLAVAVYQHYRRVENNL 137


>UNIPROTKB|Q9KQS7 [details] [associations]
            symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
            ClpX" species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
            activity" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
            Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
            GO:GO:0006457 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
            GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
            KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
            TIGRFAMs:TIGR00382 PIR:F82139 RefSeq:NP_231555.1
            ProteinModelPortal:Q9KQS7 SMR:Q9KQS7 PRIDE:Q9KQS7 DNASU:2613550
            GeneID:2613550 KEGG:vch:VC1921 PATRIC:20082886 Uniprot:Q9KQS7
        Length = 426

 Score = 130 (50.8 bits), Expect = 9.2e-08, P = 9.2e-08
 Identities = 24/33 (72%), Positives = 30/33 (90%)

Query:     7 KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYN 39
             KI E+L+ +V+GQEHAKKVL+VAVYNHYKR+ N
Sbjct:    70 KIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRN 102


>TIGR_CMR|VC_1921 [details] [associations]
            symbol:VC_1921 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:686 "Vibrio cholerae O1 biovar El Tor"
            [GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
            activity" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
            Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
            GO:GO:0006457 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
            GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
            KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
            TIGRFAMs:TIGR00382 PIR:F82139 RefSeq:NP_231555.1
            ProteinModelPortal:Q9KQS7 SMR:Q9KQS7 PRIDE:Q9KQS7 DNASU:2613550
            GeneID:2613550 KEGG:vch:VC1921 PATRIC:20082886 Uniprot:Q9KQS7
        Length = 426

 Score = 130 (50.8 bits), Expect = 9.2e-08, P = 9.2e-08
 Identities = 24/33 (72%), Positives = 30/33 (90%)

Query:     7 KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYN 39
             KI E+L+ +V+GQEHAKKVL+VAVYNHYKR+ N
Sbjct:    70 KIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRN 102


>TIGR_CMR|APH_0969 [details] [associations]
            symbol:APH_0969 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:212042 "Anaplasma phagocytophilum HZ"
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0006457 "protein
            folding" evidence=ISS] [GO:0009368 "endopeptidase Clp complex"
            evidence=ISS] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
            HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
            SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
            GO:GO:0046872 GO:GO:0008270 EMBL:CP000235 GenomeReviews:CP000235_GR
            GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            RefSeq:YP_505536.1 ProteinModelPortal:Q2GJB5 SMR:Q2GJB5
            STRING:Q2GJB5 PRIDE:Q2GJB5 GeneID:3930607 KEGG:aph:APH_0969
            PATRIC:20950654 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
            OMA:SDLELEH ProtClustDB:PRK05342 BioCyc:APHA212042:GHPM-981-MONOMER
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 Uniprot:Q2GJB5
        Length = 415

 Score = 126 (49.4 bits), Expect = 2.4e-07, P = 2.4e-07
 Identities = 23/34 (67%), Positives = 31/34 (91%)

Query:     7 KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYNN 40
             +I E L+++V+GQEH+KKVLSVAVYNHYKR+ N+
Sbjct:    62 EIKEVLDEYVIGQEHSKKVLSVAVYNHYKRLRNS 95


>TAIR|locus:2154257 [details] [associations]
            symbol:CLPX "CLP protease regulatory subunit X"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0006457 "protein
            folding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0005759
            "mitochondrial matrix" evidence=IDA] [GO:0015996 "chlorophyll
            catabolic process" evidence=RCA] InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
            GO:GO:0005739 GO:GO:0005524 EMBL:CP002688 GO:GO:0006457
            GO:GO:0006508 GO:GO:0017111 EMBL:AB013388 GO:GO:0008233
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 KO:K03544
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 HSSP:O25926
            ProtClustDB:CLSN2690007 EMBL:AY035103 EMBL:AY142561 IPI:IPI00536799
            RefSeq:NP_568792.1 UniGene:At.21717 ProteinModelPortal:Q9FK07
            SMR:Q9FK07 STRING:Q9FK07 PRIDE:Q9FK07 EnsemblPlants:AT5G53350.1
            GeneID:835416 KEGG:ath:AT5G53350 TAIR:At5g53350 InParanoid:Q9FK07
            OMA:NCRSAYF PhylomeDB:Q9FK07 ArrayExpress:Q9FK07
            Genevestigator:Q9FK07 Uniprot:Q9FK07
        Length = 579

 Score = 128 (50.1 bits), Expect = 2.4e-07, P = 2.4e-07
 Identities = 27/35 (77%), Positives = 30/35 (85%)

Query:     6 PK-IYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYN 39
             PK I + LNK V+GQE AKKVLSVAVYNHYKRIY+
Sbjct:   161 PKEICKGLNKFVIGQERAKKVLSVAVYNHYKRIYH 195


>TIGR_CMR|ECH_0900 [details] [associations]
            symbol:ECH_0900 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:205920 "Ehrlichia chaffeensis str. Arkansas"
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
            Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
            Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
            GO:GO:0006457 GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR
            GO:GO:0008270 GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
            OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
            TIGRFAMs:TIGR00382 RefSeq:YP_507694.1 ProteinModelPortal:Q2GFT9
            SMR:Q2GFT9 STRING:Q2GFT9 PRIDE:Q2GFT9 GeneID:3927295
            KEGG:ech:ECH_0900 PATRIC:20577200
            BioCyc:ECHA205920:GJNR-903-MONOMER Uniprot:Q2GFT9
        Length = 406

 Score = 124 (48.7 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 24/37 (64%), Positives = 32/37 (86%)

Query:     4 VNPK-IYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYN 39
             + PK I + L+++V+GQEH+KKVLSVAVYNHYKR+ N
Sbjct:    59 LKPKEIKKVLDEYVIGQEHSKKVLSVAVYNHYKRLSN 95


>TIGR_CMR|CBU_0739 [details] [associations]
            symbol:CBU_0739 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:227377 "Coxiella burnetii RSA 493"
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0006508 "proteolysis"
            evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
            SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
            GO:GO:0046872 GO:GO:0008270 EMBL:AE016828 GenomeReviews:AE016828_GR
            GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH
            ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
            RefSeq:NP_819765.1 ProteinModelPortal:Q83DJ1 SMR:Q83DJ1
            PRIDE:Q83DJ1 GeneID:1208630 KEGG:cbu:CBU_0739 PATRIC:17930169
            BioCyc:CBUR227377:GJ7S-736-MONOMER Uniprot:Q83DJ1
        Length = 422

 Score = 124 (48.7 bits), Expect = 4.1e-07, P = 4.1e-07
 Identities = 23/34 (67%), Positives = 30/34 (88%)

Query:     6 PKIYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYN 39
             P+I+  L+++V+GQE AKKVLSVAVYNHYKR+ N
Sbjct:    64 PEIHRMLDEYVIGQEFAKKVLSVAVYNHYKRLGN 97


>TIGR_CMR|CPS_3784 [details] [associations]
            symbol:CPS_3784 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:167879 "Colwellia psychrerythraea 34H"
            [GO:0005524 "ATP binding" evidence=ISS] HAMAP:MF_00175
            InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
            InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
            SMART:SM00994 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
            GO:GO:0008270 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
            HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_270451.1
            HSSP:P0A6H5 ProteinModelPortal:Q47XL9 SMR:Q47XL9 STRING:Q47XL9
            PRIDE:Q47XL9 GeneID:3521714 KEGG:cps:CPS_3784 PATRIC:21470481
            BioCyc:CPSY167879:GI48-3806-MONOMER Uniprot:Q47XL9
        Length = 424

 Score = 122 (48.0 bits), Expect = 6.7e-07, P = 6.7e-07
 Identities = 24/38 (63%), Positives = 33/38 (86%)

Query:     3 LVNP-KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYN 39
             L +P +I E L+++V+GQ+HAKKVL+VAVYNHYKR+ N
Sbjct:    65 LPSPIEIRESLDEYVIGQDHAKKVLAVAVYNHYKRLRN 102


>TAIR|locus:2006942 [details] [associations]
            symbol:AT1G33360 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM]
            [GO:0006457 "protein folding" evidence=IEA] [GO:0016887 "ATPase
            activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006457 GO:GO:0006508
            GO:GO:0017111 GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:BT015363
            EMBL:BT015893 IPI:IPI00536875 RefSeq:NP_564423.3 UniGene:At.39953
            ProteinModelPortal:Q66GN9 SMR:Q66GN9 STRING:Q66GN9 PaxDb:Q66GN9
            PRIDE:Q66GN9 EnsemblPlants:AT1G33360.1 GeneID:840230
            KEGG:ath:AT1G33360 TAIR:At1g33360 InParanoid:Q66GN9 OMA:KEICKWL
            PhylomeDB:Q66GN9 ProtClustDB:CLSN2690007 Genevestigator:Q66GN9
            Uniprot:Q66GN9
        Length = 656

 Score = 123 (48.4 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 25/35 (71%), Positives = 30/35 (85%)

Query:     6 PK-IYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYN 39
             PK I ++L+K V+GQ  AKKVLSVAVYNHYKRIY+
Sbjct:   252 PKEICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYH 286


>TAIR|locus:2155446 [details] [associations]
            symbol:AT5G49840 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0016887 "ATPase
            activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
            EMBL:CP002688 GO:GO:0006457 GO:GO:0006508 GO:GO:0017111
            GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 IPI:IPI00522644
            RefSeq:NP_568714.4 UniGene:At.49150 ProteinModelPortal:F4K7F6
            SMR:F4K7F6 PRIDE:F4K7F6 EnsemblPlants:AT5G49840.1 GeneID:835047
            KEGG:ath:AT5G49840 OMA:ASESYNI Uniprot:F4K7F6
        Length = 608

 Score = 121 (47.7 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 26/38 (68%), Positives = 31/38 (81%)

Query:     3 LVNPK-IYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYN 39
             L  PK I + L++ V+GQE AKKVLSVAVYNHYKRIY+
Sbjct:   197 LPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYH 234


>TIGR_CMR|CHY_0326 [details] [associations]
            symbol:CHY_0326 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:246194 "Carboxydothermus hydrogenoformans
            Z-2901" [GO:0005524 "ATP binding" evidence=ISS] [GO:0009368
            "endopeptidase Clp complex" evidence=ISS] [GO:0051082 "unfolded
            protein binding" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
            Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
            GO:GO:0006457 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
            GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
            HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_359189.1
            ProteinModelPortal:Q3AF95 SMR:Q3AF95 STRING:Q3AF95 GeneID:3726618
            KEGG:chy:CHY_0326 PATRIC:21273823
            BioCyc:CHYD246194:GJCN-327-MONOMER Uniprot:Q3AF95
        Length = 418

 Score = 117 (46.2 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 22/31 (70%), Positives = 28/31 (90%)

Query:     7 KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRI 37
             +I  YL+++V+GQE AKKVL+VAVYNHYKRI
Sbjct:    62 EIKAYLDQYVIGQEEAKKVLAVAVYNHYKRI 92


>ASPGD|ASPL0000057717 [details] [associations]
            symbol:AN0349 species:162425 "Emericella nidulans"
            [GO:0042026 "protein refolding" evidence=IEA] [GO:0005759
            "mitochondrial matrix" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
            GO:GO:0006457 EMBL:BN001308 GO:GO:0006508 GO:GO:0017111
            GO:GO:0008233 EMBL:AACD01000006 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
            PANTHER:PTHR11262:SF4 OrthoDB:EOG4FXVH6 RefSeq:XP_657953.1
            ProteinModelPortal:Q5BGI1 STRING:Q5BGI1
            EnsemblFungi:CADANIAT00002357 GeneID:2876125 KEGG:ani:AN0349.2
            OMA:DAMFETP Uniprot:Q5BGI1
        Length = 630

 Score = 119 (46.9 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 22/37 (59%), Positives = 31/37 (83%)

Query:     2 ILVNPK-IYEYLNKHVVGQEHAKKVLSVAVYNHYKRI 37
             + + PK + +YL++ VVGQE AKK+LSVAVYNHY+R+
Sbjct:    77 VRITPKSLKQYLDQFVVGQERAKKILSVAVYNHYQRV 113


>TIGR_CMR|CJE_0324 [details] [associations]
            symbol:CJE_0324 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:195099 "Campylobacter jejuni RM1221"
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
            Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
            Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
            GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
            EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0017111 GO:GO:0008233
            InterPro:IPR025943 PROSITE:PS00676 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
            OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
            TIGRFAMs:TIGR00382 RefSeq:YP_178344.1 ProteinModelPortal:Q5HWJ1
            SMR:Q5HWJ1 STRING:Q5HWJ1 GeneID:3231086 KEGG:cjr:CJE0324
            PATRIC:20042350 BioCyc:CJEJ195099:GJC0-329-MONOMER Uniprot:Q5HWJ1
        Length = 407

 Score = 114 (45.2 bits), Expect = 4.6e-06, P = 4.6e-06
 Identities = 20/36 (55%), Positives = 29/36 (80%)

Query:     4 VNPK-IYEYLNKHVVGQEHAKKVLSVAVYNHYKRIY 38
             + PK +  YL+++V+GQ+ AKKV SV VYNHYKR++
Sbjct:    61 ITPKELKAYLDRYVIGQDRAKKVFSVGVYNHYKRLF 96


>TIGR_CMR|BA_4704 [details] [associations]
            symbol:BA_4704 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:198094 "Bacillus anthracis str. Ames"
            [GO:0006508 "proteolysis" evidence=ISS] HAMAP:MF_00175
            InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
            InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
            SMART:SM00994 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
            GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:NP_846917.1
            RefSeq:YP_021352.1 RefSeq:YP_030616.1 ProteinModelPortal:Q81LB9
            SMR:Q81LB9 PRIDE:Q81LB9 DNASU:1083685
            EnsemblBacteria:EBBACT00000013271 EnsemblBacteria:EBBACT00000014313
            EnsemblBacteria:EBBACT00000019954 GeneID:1083685 GeneID:2816065
            GeneID:2851842 KEGG:ban:BA_4704 KEGG:bar:GBAA_4704 KEGG:bat:BAS4369
            OMA:IMFEVPS BioCyc:BANT260799:GJAJ-4424-MONOMER
            BioCyc:BANT261594:GJ7F-4572-MONOMER Uniprot:Q81LB9
        Length = 419

 Score = 114 (45.2 bits), Expect = 4.9e-06, P = 4.9e-06
 Identities = 21/34 (61%), Positives = 30/34 (88%)

Query:     7 KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYNN 40
             +I E L+++V+GQ++AKK L+VAVYNHYKRI +N
Sbjct:    66 EIREILDEYVIGQDNAKKALAVAVYNHYKRINSN 99


>UNIPROTKB|P0A6H1 [details] [associations]
            symbol:clpX "ClpX" species:83333 "Escherichia coli K-12"
            [GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0006457 "protein folding"
            evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0006950 "response to stress" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA;IDA] HAMAP:MF_00175 InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
            Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
            GO:GO:0006457 GO:GO:0006950 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
            GO:GO:0008270 EMBL:U82664 GO:GO:0017111 InterPro:IPR019489
            Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
            KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
            TIGRFAMs:TIGR00382 EMBL:L18867 EMBL:Z23278 PIR:A48709
            RefSeq:NP_414972.1 RefSeq:YP_488730.1 PDB:1OVX PDB:2DS5 PDB:2DS6
            PDB:2DS7 PDB:2DS8 PDB:3HTE PDB:3HWS PDBsum:1OVX PDBsum:2DS5
            PDBsum:2DS6 PDBsum:2DS7 PDBsum:2DS8 PDBsum:3HTE PDBsum:3HWS
            ProteinModelPortal:P0A6H1 SMR:P0A6H1 DIP:DIP-35907N IntAct:P0A6H1
            PaxDb:P0A6H1 PRIDE:P0A6H1 EnsemblBacteria:EBESCT00000004587
            EnsemblBacteria:EBESCT00000004721 EnsemblBacteria:EBESCT00000004722
            EnsemblBacteria:EBESCT00000015548 GeneID:12931741 GeneID:945083
            KEGG:ecj:Y75_p0426 KEGG:eco:b0438 PATRIC:32116029 EchoBASE:EB0157
            EcoGene:EG10159 BioCyc:EcoCyc:EG10159-MONOMER
            BioCyc:ECOL316407:JW0428-MONOMER BioCyc:MetaCyc:EG10159-MONOMER
            EvolutionaryTrace:P0A6H1 Genevestigator:P0A6H1 Uniprot:P0A6H1
        Length = 424

 Score = 113 (44.8 bits), Expect = 6.3e-06, P = 6.3e-06
 Identities = 21/33 (63%), Positives = 28/33 (84%)

Query:     7 KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYN 39
             +I  +L+ +V+GQE AKKVL+VAVYNHYKR+ N
Sbjct:    69 EIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRN 101


>TIGR_CMR|SO_1795 [details] [associations]
            symbol:SO_1795 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:211586 "Shewanella oneidensis MR-1"
            [GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0006508 "proteolysis"
            evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
            SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
            GO:GO:0046872 GO:GO:0008270 EMBL:AE014299 GenomeReviews:AE014299_GR
            GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:NP_717404.1
            ProteinModelPortal:Q8EG18 SMR:Q8EG18 PRIDE:Q8EG18 GeneID:1169568
            KEGG:son:SO_1795 PATRIC:23523213 OMA:MEMRESA Uniprot:Q8EG18
        Length = 426

 Score = 111 (44.1 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 20/30 (66%), Positives = 27/30 (90%)

Query:    11 YLNKHVVGQEHAKKVLSVAVYNHYKRIYNN 40
             +L+ +V+GQ+ AKKVLSVAVYNHYKR+ N+
Sbjct:    74 HLDDYVIGQDRAKKVLSVAVYNHYKRLKNS 103


>TIGR_CMR|GSU_1791 [details] [associations]
            symbol:GSU_1791 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:243231 "Geobacter sulfurreducens PCA"
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
            Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
            Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
            GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 EMBL:AE017180
            GenomeReviews:AE017180_GR GO:GO:0017111 InterPro:IPR019489
            Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
            KO:K03544 ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
            TIGRFAMs:TIGR00382 OMA:IMFEVPS RefSeq:NP_952841.1
            ProteinModelPortal:Q74C83 SMR:Q74C83 PRIDE:Q74C83 GeneID:2686411
            KEGG:gsu:GSU1791 PATRIC:22026429
            BioCyc:GSUL243231:GH27-1811-MONOMER Uniprot:Q74C83
        Length = 417

 Score = 110 (43.8 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 22/36 (61%), Positives = 30/36 (83%)

Query:     3 LVNPK-IYEYLNKHVVGQEHAKKVLSVAVYNHYKRI 37
             L  P+ I + L+++V+GQ+ AKKVL+VAVYNHYKRI
Sbjct:    63 LPKPREIKDVLDEYVIGQDQAKKVLAVAVYNHYKRI 98


>WB|WBGene00008412 [details] [associations]
            symbol:D2030.2 species:6239 "Caenorhabditis elegans"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0006457
            "protein folding" evidence=IEA] [GO:0051082 "unfolded protein
            binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
            InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
            Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006457
            GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4
            GeneTree:ENSGT00390000017625 HSSP:O25926 EMBL:Z73906 OMA:QMASSEL
            PIR:T20353 RefSeq:NP_001021076.1 ProteinModelPortal:P90788
            SMR:P90788 STRING:P90788 PaxDb:P90788 PRIDE:P90788
            EnsemblMetazoa:D2030.2a.1 EnsemblMetazoa:D2030.2a.2
            EnsemblMetazoa:D2030.2a.3 GeneID:172511 KEGG:cel:CELE_D2030.2
            UCSC:D2030.2a.1 CTD:172511 WormBase:D2030.2a InParanoid:P90788
            NextBio:875833 ArrayExpress:P90788 Uniprot:P90788
        Length = 586

 Score = 110 (43.8 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 21/35 (60%), Positives = 28/35 (80%)

Query:     7 KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYNNI 41
             +I EYL+K VVGQ+ AKK L+V VY HY+R+ +NI
Sbjct:   132 QIAEYLDKFVVGQKKAKKTLAVGVYQHYRRLEHNI 166


>UNIPROTKB|P0CAU2 [details] [associations]
            symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
            ClpX" species:190650 "Caulobacter crescentus CB15" [GO:0005515
            "protein binding" evidence=IPI] HAMAP:MF_00175 InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
            Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
            GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 GO:GO:0017111
            InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
            HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:AE005673 PIR:D87492
            RefSeq:NP_420768.1 ProteinModelPortal:P0CAU2 SMR:P0CAU2
            IntAct:P0CAU2 PRIDE:P0CAU2 GeneID:942736 GenomeReviews:AE005673_GR
            KEGG:ccr:CC_1961 PATRIC:21300930 Uniprot:P0CAU2
        Length = 420

 Score = 107 (42.7 bits), Expect = 2.8e-05, P = 2.8e-05
 Identities = 20/31 (64%), Positives = 27/31 (87%)

Query:     7 KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRI 37
             +I E L+ +V+GQ HAKKVL+VAV+NHYKR+
Sbjct:    68 EICEVLDDYVIGQGHAKKVLAVAVHNHYKRL 98


>UNIPROTKB|P0A528 [details] [associations]
            symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
            ClpX" species:1773 "Mycobacterium tuberculosis" [GO:0005515
            "protein binding" evidence=IPI] [GO:0005618 "cell wall"
            evidence=IDA] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00175
            InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
            InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
            SMART:SM00994 GO:GO:0005524 GO:GO:0040007 GO:GO:0005618
            GO:GO:0006457 EMBL:AE000516 GenomeReviews:AE000516_GR
            GenomeReviews:AL123456_GR GO:GO:0046872 GO:GO:0008270 EMBL:BX842579
            GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:IMFEVPS PIR:H70864
            RefSeq:NP_216973.1 RefSeq:NP_337018.1 RefSeq:YP_006515894.1
            ProteinModelPortal:P0A528 SMR:P0A528 PRIDE:P0A528
            EnsemblBacteria:EBMYCT00000001091 EnsemblBacteria:EBMYCT00000069736
            GeneID:13319167 GeneID:888167 GeneID:925794 KEGG:mtc:MT2532
            KEGG:mtu:Rv2457c KEGG:mtv:RVBD_2457c PATRIC:18127322
            TubercuList:Rv2457c Uniprot:P0A528
        Length = 426

 Score = 103 (41.3 bits), Expect = 7.7e-05, P = 7.7e-05
 Identities = 19/31 (61%), Positives = 26/31 (83%)

Query:     7 KIYEYLNKHVVGQEHAKKVLSVAVYNHYKRI 37
             +I E+L  +V+GQ+ AK+ L+VAVYNHYKRI
Sbjct:    66 EIREFLEGYVIGQDTAKRTLAVAVYNHYKRI 96


>SGD|S000000431 [details] [associations]
            symbol:MCX1 "Mitochondrial matrix protein" species:4932
            "Saccharomyces cerevisiae" [GO:0005759 "mitochondrial matrix"
            evidence=IEA;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0051082 "unfolded protein binding"
            evidence=IEA] [GO:0042026 "protein refolding" evidence=IMP]
            [GO:0006457 "protein folding" evidence=IEA] [GO:0003674
            "molecular_function" evidence=ND] InterPro:IPR003593
            InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
            SGD:S000000431 GO:GO:0005524 GO:GO:0005759 EMBL:BK006936
            GO:GO:0017111 GO:GO:0042026 InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
            PANTHER:PTHR11262:SF4 GeneTree:ENSGT00390000017625 EMBL:Z36096
            PIR:S46103 RefSeq:NP_009786.1 ProteinModelPortal:P38323 SMR:P38323
            DIP:DIP-6422N IntAct:P38323 MINT:MINT-4477678 STRING:P38323
            PaxDb:P38323 EnsemblFungi:YBR227C GeneID:852528 KEGG:sce:YBR227C
            CYGD:YBR227c OMA:QMASSEL OrthoDB:EOG4FXVH6 NextBio:971574
            Genevestigator:P38323 GermOnline:YBR227C Uniprot:P38323
        Length = 520

 Score = 104 (41.7 bits), Expect = 8.0e-05, P = 8.0e-05
 Identities = 21/33 (63%), Positives = 28/33 (84%)

Query:     6 PK-IYEYLNKHVVGQEHAKKVLSVAVYNHYKRI 37
             PK + ++L++++VGQE  KKVLSVAVYNHY RI
Sbjct:    39 PKALKKFLDEYIVGQEIGKKVLSVAVYNHYLRI 71


>TIGR_CMR|NSE_0753 [details] [associations]
            symbol:NSE_0753 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:222891 "Neorickettsia sennetsu str. Miyayama"
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
            Clp complex" evidence=ISS] [GO:0051082 "unfolded protein binding"
            evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
            SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
            GO:GO:0046872 GO:GO:0008270 GO:GO:0017111 EMBL:CP000237
            GenomeReviews:CP000237_GR InterPro:IPR019489 Pfam:PF10431
            SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
            ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
            OMA:IMFEVPS RefSeq:YP_506628.1 ProteinModelPortal:Q2GD18
            STRING:Q2GD18 PRIDE:Q2GD18 GeneID:3931978 KEGG:nse:NSE_0753
            PATRIC:22681511 BioCyc:NSEN222891:GHFU-764-MONOMER Uniprot:Q2GD18
        Length = 400

 Score = 97 (39.2 bits), Expect = 0.00031, P = 0.00031
 Identities = 20/36 (55%), Positives = 24/36 (66%)

Query:     6 PK-IYEYLNKHVVGQEHAKKVLSVAVYNHYKRIYNN 40
             PK I +Y +  +  QE AKK+LSVAVYNHYK    N
Sbjct:    60 PKDIKKYFDSFITAQEDAKKILSVAVYNHYKCFVGN 95


>TIGR_CMR|SPO_1004 [details] [associations]
            symbol:SPO_1004 "ATP-dependent Clp protease, ATP-binding
            subunit ClpX" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0005524
            "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase Clp complex"
            evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
            HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
            InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
            SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
            EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0008270
            GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
            eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
            PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_166256.1
            HSSP:P0A6H1 ProteinModelPortal:Q5LUP9 SMR:Q5LUP9 GeneID:3195507
            KEGG:sil:SPO1004 PATRIC:23375301 OMA:YVIGQQQ Uniprot:Q5LUP9
        Length = 424

 Score = 95 (38.5 bits), Expect = 0.00056, P = 0.00056
 Identities = 18/30 (60%), Positives = 25/30 (83%)

Query:     8 IYEYLNKHVVGQEHAKKVLSVAVYNHYKRI 37
             I + L+ +V+GQ  AK+VLSVAV+NHYKR+
Sbjct:    71 ICDVLDDYVIGQSTAKRVLSVAVHNHYKRL 100


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.134   0.375    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       67        56   0.00091  102 3  11 22  0.44    27
                                                     29  0.42    27


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  35
  No. of states in DFA:  411 (44 KB)
  Total size of DFA:  74 KB (2063 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  6.72u 0.09s 6.81t   Elapsed:  00:00:00
  Total cpu time:  6.72u 0.09s 6.81t   Elapsed:  00:00:00
  Start:  Thu Aug 15 16:09:59 2013   End:  Thu Aug 15 16:09:59 2013

the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with CLPX CLPX CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial	protein from Homo sapiens	3.6e-11
BLAST match view associations BLAST with clpxa clpxa clpxa ClpX caseinolytic peptidase X homolog a	gene_product from Danio rerio	1.2e-10
BLAST match view associations BLAST with CLPX CLPX CLPX Uncharacterized protein	protein from Bos taurus	2.6e-10
BLAST match view associations BLAST with LOC100151784 LOC100151784 LOC100151784 Uncharacterized protein	protein from Sus scrofa	2.7e-10
BLAST match view associations BLAST with CLPX CLPX CLPX Uncharacterized protein	protein from Canis lupus familiaris	2.7e-10
BLAST match view associations BLAST with CLPX CLPX CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial	protein from Homo sapiens	2.7e-10
BLAST match view associations BLAST with Clpx Clpx Clpx ClpX caseinolytic peptidase X homolog (E. coli)	gene from Rattus norvegicus	2.7e-10
BLAST match view associations BLAST with Clpx Clpx Clpx caseinolytic peptidase X (E.coli)	protein from Mus musculus	2.7e-10
BLAST match view associations BLAST with CLPX CLPX CLPX Uncharacterized protein	protein from Gallus gallus	7.1e-10
BLAST match view associations BLAST with CLPX CLPX CLPX Uncharacterized protein	protein from Gallus gallus	7.3e-10
BLAST match view associations BLAST with CG4538 CG4538 CG4538	protein from Drosophila melanogaster	3.6e-09
BLAST match view associations BLAST with K07A3.3 K07A3.3 K07A3.3	gene from Caenorhabditis elegans	4.7e-08
BLAST match view associations BLAST with clpX clpX clpX ATP-dependent Clp protease ATP-binding subunit ClpX	protein from Vibrio cholerae O1 biovar El Tor str. N16961	9.2e-08
BLAST match view associations BLAST with VC_1921 VC_1921 VC_1921 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Vibrio cholerae O1 biovar El Tor	9.2e-08
BLAST match view associations BLAST with APH_0969 APH_0969 APH_0969 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Anaplasma phagocytophilum str. HZ	2.4e-07
BLAST match view associations BLAST with CLPX CLPX CLPX CLP protease regulatory subunit X	protein from Arabidopsis thaliana	2.4e-07
BLAST match view associations BLAST with ECH_0900 ECH_0900 ECH_0900 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Ehrlichia chaffeensis str. Arkansas	3.8e-07
BLAST match view associations BLAST with CBU_0739 CBU_0739 CBU_0739 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Coxiella burnetii RSA 493	4.1e-07
BLAST match view associations BLAST with CPS_3784 CPS_3784 CPS_3784 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Colwellia psychrerythraea 34H	6.7e-07
BLAST match view associations BLAST with AT1G33360 AT1G33360 AT1G33360	protein from Arabidopsis thaliana	1.0e-06
BLAST match view associations BLAST with AT5G49840 AT5G49840 AT5G49840	protein from Arabidopsis thaliana	1.5e-06
BLAST match view associations BLAST with CHY_0326 CHY_0326 CHY_0326 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Carboxydothermus hydrogenoformans Z-2901	2.3e-06
BLAST match view associations BLAST with CJE_0324 CJE_0324 CJE_0324 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Campylobacter jejuni RM1221	4.6e-06
BLAST match view associations BLAST with BA_4704 BA_4704 BA_4704 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Bacillus anthracis str. Ames	4.9e-06
BLAST match view associations BLAST with clpX clpX clpX ClpX	protein from Escherichia coli K-12	6.3e-06
BLAST match view associations BLAST with SO_1795 SO_1795 SO_1795 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Shewanella oneidensis MR-1	1.1e-05
BLAST match view associations BLAST with GSU_1791 GSU_1791 GSU_1791 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Geobacter sulfurreducens PCA	1.3e-05
BLAST match view associations BLAST with D2030.2 D2030.2 D2030.2	gene from Caenorhabditis elegans	2.1e-05
BLAST match view associations BLAST with clpX clpX clpX ATP-dependent Clp protease ATP-binding subunit ClpX	protein from Caulobacter crescentus CB15	2.8e-05
BLAST match view associations BLAST with clpX clpX clpX ATP-dependent Clp protease ATP-binding subunit ClpX	protein from Mycobacterium tuberculosis	7.7e-05
BLAST match view associations BLAST with MCX1 MCX1 MCX1 Mitochondrial matrix protein	gene from Saccharomyces cerevisiae	8.0e-05
BLAST match view associations BLAST with NSE_0753 NSE_0753 NSE_0753 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Neorickettsia sennetsu str. Miyayama	0.00031
BLAST match view associations BLAST with SPO_1004 SPO_1004 SPO_1004 ATP-dependent Clp protease, ATP-binding subunit ClpX	protein from Ruegeria pomeroyi DSS-3	0.00056