Query psy13429
Match_columns 116
No_of_seqs 184 out of 1027
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 19:14:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13429.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13429hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sbm_A DISD protein, DSZD; tra 99.9 8.7E-22 3E-26 151.9 9.0 87 1-107 195-281 (281)
2 2c2n_A Malonyl COA-acyl carrie 99.9 9.4E-22 3.2E-26 155.8 8.7 101 1-116 238-338 (339)
3 3k89_A Malonyl COA-ACP transac 99.8 1.1E-21 3.7E-26 153.8 7.6 89 1-108 207-295 (314)
4 3ezo_A Malonyl COA-acyl carrie 99.8 1.7E-21 5.7E-26 153.2 8.2 89 1-108 211-299 (318)
5 3im9_A MCAT, MCT, malonyl COA- 99.8 1.8E-21 6E-26 152.5 7.6 89 1-108 211-299 (316)
6 3qat_A Malonyl COA-acyl carrie 99.8 1.6E-21 5.6E-26 153.0 6.8 89 1-108 211-299 (318)
7 3tqe_A Malonyl-COA-[acyl-carri 99.8 2.2E-21 7.4E-26 152.1 7.1 89 1-108 209-297 (316)
8 2cuy_A Malonyl COA-[acyl carri 99.8 7.5E-21 2.6E-25 148.7 9.7 88 1-107 198-285 (305)
9 2qc3_A MCT, malonyl COA-acyl c 99.8 3.8E-21 1.3E-25 150.3 7.8 89 1-108 199-287 (303)
10 3ptw_A Malonyl COA-acyl carrie 99.8 3.3E-21 1.1E-25 152.9 6.9 88 1-107 203-290 (336)
11 1nm2_A Malonyl COA:acyl carrie 99.8 5.7E-21 1.9E-25 150.1 7.5 88 1-107 206-293 (317)
12 1mla_A Malonyl-coenzyme A acyl 99.8 7.4E-21 2.5E-25 148.9 8.1 87 1-106 205-291 (309)
13 3im8_A Malonyl acyl carrier pr 99.8 5.7E-21 2E-25 149.4 6.6 87 1-107 203-289 (307)
14 2h1y_A Malonyl coenzyme A-acyl 99.8 2.2E-20 7.7E-25 147.4 6.5 86 1-107 214-299 (321)
15 3tzy_A Polyketide synthase PKS 99.8 8E-19 2.7E-23 145.6 8.9 94 1-109 342-435 (491)
16 3g87_A Malonyl COA-acyl carrie 99.8 3.8E-19 1.3E-23 144.0 6.7 92 1-110 200-294 (394)
17 4amm_A DYNE8; transferase; 1.4 99.7 1.1E-17 3.7E-22 135.3 5.6 80 1-104 282-361 (401)
18 2qo3_A Eryaii erythromycin pol 99.7 3.7E-17 1.3E-21 143.6 7.1 88 1-107 733-820 (915)
19 2hg4_A DEBS, 6-deoxyerythronol 99.7 6.7E-17 2.3E-21 142.0 7.2 89 1-108 749-837 (917)
20 3zen_D Fatty acid synthase; tr 99.5 1.8E-14 6.2E-19 138.1 5.4 102 1-106 1586-1721(3089)
21 2pff_B Fatty acid synthase sub 99.4 3.2E-14 1.1E-18 130.6 2.8 85 1-108 432-524 (2006)
22 2uv8_G Fatty acid synthase sub 99.4 9E-14 3.1E-18 130.0 5.2 83 1-105 432-521 (2051)
23 3hhd_A Fatty acid synthase; tr 99.3 1.1E-12 3.9E-17 115.8 3.8 86 1-106 689-779 (965)
24 2uva_G Fatty acid synthase bet 99.3 9.2E-13 3.1E-17 123.4 2.4 88 1-108 426-518 (2060)
25 2vz8_A Fatty acid synthase; tr 99.1 1.7E-11 5.8E-16 116.3 2.6 89 1-106 687-777 (2512)
26 3zen_D Fatty acid synthase; tr 99.0 1.3E-10 4.3E-15 112.0 5.1 76 1-112 301-376 (3089)
27 2uv8_A Fatty acid synthase sub 98.9 2E-09 6.9E-14 100.4 5.8 49 54-106 14-63 (1887)
28 2uv9_A Fatty acid synthase alp 97.7 3.2E-05 1.1E-09 72.6 5.4 50 54-106 14-63 (1878)
29 2uva_G Fatty acid synthase bet 97.4 2.2E-05 7.7E-10 74.2 0.1 59 1-75 1992-2056(2060)
30 2uv8_G Fatty acid synthase sub 97.3 4.3E-05 1.5E-09 72.3 0.7 60 1-76 1981-2046(2051)
31 1i4w_A Mitochondrial replicati 54.0 5.6 0.00019 31.3 1.9 18 85-102 60-78 (353)
32 3ira_A Conserved protein; meth 29.8 30 0.001 24.1 2.3 32 56-91 12-47 (173)
33 2krx_A ASL3597 protein; struct 25.9 43 0.0015 21.7 2.3 24 67-96 54-77 (94)
34 2bay_A PRE-mRNA splicing facto 25.2 1E+02 0.0035 17.5 3.9 36 15-66 8-43 (61)
35 3rt3_C NS1, NS1B, non-structur 25.0 23 0.00078 22.9 0.9 13 87-99 9-21 (109)
36 2h1r_A Dimethyladenosine trans 22.8 50 0.0017 24.5 2.5 43 50-95 12-54 (299)
37 3tqs_A Ribosomal RNA small sub 22.7 45 0.0016 24.4 2.3 11 85-95 31-41 (255)
38 1qyr_A KSGA, high level kasuga 20.9 36 0.0012 24.9 1.4 14 85-98 23-37 (252)
No 1
>3sbm_A DISD protein, DSZD; transferase; HET: P6G; 1.35A {Sorangium cellulosum} PDB: 3rgi_A
Probab=99.86 E-value=8.7e-22 Score=151.89 Aligned_cols=87 Identities=33% Similarity=0.508 Sum_probs=80.3
Q ss_pred CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429 1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ 80 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~ 80 (116)
|+|+.++|++.++++++++|++|++||++|+++. + +.+++||.+|+++||+|.++++.|.+.
T Consensus 195 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~-~~~~~~~~~~l~~pV~f~~~i~~l~~~-- 256 (281)
T 3sbm_A 195 MRPAMVEFGRFLEGYDFAPPKIPVISNVTARPCK---------------A-DGIRAALSEQIASPVRWCESIRYLMGR-- 256 (281)
T ss_dssp GHHHHHHHHHHHTTCCCCCCSSCEECTTTSSBCC---------------G-GGHHHHHHHGGGSCEEHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEECCCCCCCC---------------h-HHHHHHHHHHccccEeHHHHHHHHHhC--
Confidence 7899999999999999999999999999999986 3 567899999999999999999999998
Q ss_pred CCccCcEEEeCCCHHHHHHHHHHhhhc
Q psy13429 81 GNHFPRTFECGPGKSLVTILNQVNKKA 107 (116)
Q Consensus 81 g~~f~~~iEiGPg~~L~~l~k~~~~~~ 107 (116)
|+ +.|||+|||++|+++++++.+++
T Consensus 257 g~--~~fvEiGP~~~L~~~~~~i~~~a 281 (281)
T 3sbm_A 257 GV--EEFVECGHGIVLTGLYAQIRRDA 281 (281)
T ss_dssp TC--CEEEECSSSSHHHHHHHHHHHHC
T ss_pred CC--CEEEEeCCcHHHHHHHHHhcCCC
Confidence 88 55699999999999999998763
No 2
>2c2n_A Malonyl COA-acyl carrier protein transacylase; fatty acid synthase, lipid synthesis, mitochondrion transfer transferase; HET: AE4; 1.55A {Homo sapiens}
Probab=99.85 E-value=9.4e-22 Score=155.80 Aligned_cols=101 Identities=47% Similarity=0.765 Sum_probs=89.2
Q ss_pred CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429 1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ 80 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~ 80 (116)
|+|+.++|++.++++++++|++|++||+||+++. +.+.+++||.+|+++||+|.++++.|.+...
T Consensus 238 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~~~~~~~y~~~~l~~pV~f~~av~~l~~~g~ 302 (339)
T 2c2n_A 238 MEPAVEPLTQALKAVDIKKPLVSVYSNVHGHRYR---------------HPGHIHKLLAQQLVSPVKWEQTMHAIYERKK 302 (339)
T ss_dssp GGGGHHHHHHHHHTCCCCCCSSEEECTTTSSBCC---------------CGGGHHHHHHHHTTSCEEHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHHhcCCCCCCCceEEECCCCCCCC---------------ChhhHHHHHHHHhhcceeHHHHHHHHHhcCC
Confidence 8999999999999999999999999999999998 6677899999999999999999999988622
Q ss_pred CCccCcEEEeCCCHHHHHHHHHHhhhcCCCcccCCC
Q psy13429 81 GNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKVPC 116 (116)
Q Consensus 81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~~~~~~~~~ 116 (116)
|..++.|||+|||++|+++++++.++.......|+|
T Consensus 303 ~~~~~~~vEiGP~~~L~~l~~~~~~~~~~~~~~~~~ 338 (339)
T 2c2n_A 303 GRGFPQTFEVGPGRQLGAILKSCNMQAWKSYSAVDV 338 (339)
T ss_dssp TCCCCEEEEESSSSHHHHHHHHHCHHHHTTEEEECC
T ss_pred CCCCCEEEEECCcHHHHHHHHHhhhcccccceeeee
Confidence 212255699999999999999998888777777776
No 3
>3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. ORYZ KACC10331, transferase; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A 3r97_A*
Probab=99.85 E-value=1.1e-21 Score=153.78 Aligned_cols=89 Identities=31% Similarity=0.543 Sum_probs=83.1
Q ss_pred CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429 1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ 80 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~ 80 (116)
|+|+.++|++.++.+++++|++|++||++|+++. +.+.+++||.+|+++||+|.++++.|.+.
T Consensus 207 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~~i~~l~~~-- 269 (314)
T 3k89_A 207 MRDAANQLGEAMAGLSWHAPQIPVVQNVDARVHD---------------GSAAIRQALVEQLYLPVQWTGCVQALASQ-- 269 (314)
T ss_dssp GHHHHHHHHHHHHTSCCCCCSSCBEETTTTEECC---------------SHHHHHHHHHHHHHSCEEHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHhcCCCCCCCceEEECCCCCccC---------------ChHHHHHHHHHHhhccEeHHHHHHHHHhC--
Confidence 7899999999999999999999999999999998 77888999999999999999999999998
Q ss_pred CCccCcEEEeCCCHHHHHHHHHHhhhcC
Q psy13429 81 GNHFPRTFECGPGKSLVTILNQVNKKAG 108 (116)
Q Consensus 81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~ 108 (116)
|+ +.|||+|||++|+++++++.++..
T Consensus 270 g~--~~fvEiGP~~~L~~~~~~~~~~~~ 295 (314)
T 3k89_A 270 GI--TRIAECGPGKVLSGLIKRIDKSLD 295 (314)
T ss_dssp TC--CEEEECSSSSHHHHHHHHHCTTSE
T ss_pred CC--CEEEEeCCcHHHHHHHHHhhccCC
Confidence 88 556999999999999999987643
No 4
>3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B}
Probab=99.85 E-value=1.7e-21 Score=153.22 Aligned_cols=89 Identities=25% Similarity=0.437 Sum_probs=83.2
Q ss_pred CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429 1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ 80 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~ 80 (116)
|+|+.++|++.++++.+++|++|++||++|+++. +.+.+++||.+|+++||+|.++++.|.+.
T Consensus 211 m~~~~~~~~~~l~~~~~~~p~ipv~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~~v~~l~~~-- 273 (318)
T 3ezo_A 211 LKPASDKLREYLAGVDVKAPKISVVNNIDVAVVS---------------DPAAIKDALVRQAAGPVRWVECVQHIARE-- 273 (318)
T ss_dssp GHHHHHHHHHHHTTSCCCCCSSEEBCTTTCCBCC---------------CHHHHHHHHHHHTTSCBCHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEECCCCcccC---------------ChhHHHHHHHHHhcccEEHHHHHHHHHhC--
Confidence 7899999999999999999999999999999998 78888999999999999999999999997
Q ss_pred CCccCcEEEeCCCHHHHHHHHHHhhhcC
Q psy13429 81 GNHFPRTFECGPGKSLVTILNQVNKKAG 108 (116)
Q Consensus 81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~ 108 (116)
|+ +.|||+|||++|++++|++.++..
T Consensus 274 g~--~~fvEiGP~~~L~~~~~~~~~~~~ 299 (318)
T 3ezo_A 274 GV--THVIECGPGKVLAGLTKRIDGNLV 299 (318)
T ss_dssp TC--CEEEEESSSSHHHHHHHHHCTTSE
T ss_pred CC--CEEEEeCCcHHHHHHHHHHhCCCc
Confidence 88 566999999999999999987653
No 5
>3im9_A MCAT, MCT, malonyl COA-acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA: acyl carrier protein TRAN (MCAT), FABD; 1.46A {Staphylococcus aureus}
Probab=99.84 E-value=1.8e-21 Score=152.51 Aligned_cols=89 Identities=27% Similarity=0.428 Sum_probs=83.2
Q ss_pred CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429 1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ 80 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~ 80 (116)
|+|+.++|++.++.+.+++|++|++||++|+++. +.+.+++||.+|+++||+|.++++.|.+.
T Consensus 211 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~~v~~l~~~-- 273 (316)
T 3im9_A 211 MKVIEEDFSSYINQFEWRDAKFPVVQNVNAQGET---------------DKEVIKSNMVKQLYSPVQFINSTEWLIDQ-- 273 (316)
T ss_dssp GGGGHHHHHHHHTTSCCCCCSSCEECTTTCSEEC---------------CHHHHHHHHHHHTTSCEEHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHhhCCCCCCCceEEEcCCCcccC---------------ChhHHHHHHHHHhhccEeHHHHHHHHHhc--
Confidence 8999999999999999999999999999999998 78888999999999999999999999998
Q ss_pred CCccCcEEEeCCCHHHHHHHHHHhhhcC
Q psy13429 81 GNHFPRTFECGPGKSLVTILNQVNKKAG 108 (116)
Q Consensus 81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~ 108 (116)
|+ +.|||+|||++|+++++++.++..
T Consensus 274 g~--~~~vEiGP~~~L~~~~~~~~~~~~ 299 (316)
T 3im9_A 274 GV--DHFIEIGPGKVLSGLIKKINRDVK 299 (316)
T ss_dssp TE--EEEEEESSSCHHHHHHHHHCSSSE
T ss_pred CC--CEEEEeCCcHHHHHHHHHHhCCCC
Confidence 88 555999999999999999987653
No 6
>3qat_A Malonyl COA-acyl carrier protein transacylase; seattle structural genomics center for infectious disease, S bartonella, CAT-scratch disease; 1.60A {Bartonella henselae}
Probab=99.84 E-value=1.6e-21 Score=152.96 Aligned_cols=89 Identities=28% Similarity=0.385 Sum_probs=83.1
Q ss_pred CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429 1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ 80 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~ 80 (116)
|+|+.++|++.++.+.+++|++|++||++|+++. +.+.+++||.+|+++||+|.++++.|.+.
T Consensus 211 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~~v~~l~~~-- 273 (318)
T 3qat_A 211 MQPAANAMKNALLTVNKTAPIVPLIANVSVIPES---------------DPERIVSLLVQQVTGRVRWRETIEWISAN-- 273 (318)
T ss_dssp GHHHHHHHHHHHHHSCCCCCSSCEECTTTCSEEC---------------CHHHHHHHHHHHHHSCEEHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHhcCCCCCCCceEEECCCCCcCC---------------ChHHHHHHHHHHhhccEeHHHHHHHHHhC--
Confidence 7899999999999999999999999999999998 78889999999999999999999999998
Q ss_pred CCccCcEEEeCCCHHHHHHHHHHhhhcC
Q psy13429 81 GNHFPRTFECGPGKSLVTILNQVNKKAG 108 (116)
Q Consensus 81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~ 108 (116)
|+ +.|||+|||++|+++++++.++..
T Consensus 274 g~--~~fvEiGP~~~L~~~~~~~~~~~~ 299 (318)
T 3qat_A 274 GV--NTLFEIGSGKVLTGLARRINKDIK 299 (318)
T ss_dssp TE--EEEEEESSCSHHHHHHHHHCSSSE
T ss_pred CC--CEEEEECCchHHHHHHHHhcCCCC
Confidence 88 555999999999999999987543
No 7
>3tqe_A Malonyl-COA-[acyl-carrier-protein] transacylase; fatty acid/phospholipid metabolism, transferase; HET: MSE; 1.50A {Coxiella burnetii}
Probab=99.84 E-value=2.2e-21 Score=152.14 Aligned_cols=89 Identities=33% Similarity=0.560 Sum_probs=83.1
Q ss_pred CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429 1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ 80 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~ 80 (116)
|+|+.++|++.++++.+++|++|++||++|+++. +.+.+++||.+|+++||+|.++++.|.+.
T Consensus 209 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~~i~~l~~~-- 271 (316)
T 3tqe_A 209 MQPAADRLAQDIAKISIDSPKVPVIHNVDVVDHN---------------EANIIRGALIKQLVRPVRWVETIKYIEEQ-- 271 (316)
T ss_dssp GHHHHHHHHHHHTTSCCCCCSSCBCCTTTSSCCC---------------SHHHHHHHHHHHTTSCEEHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHhcCCCCCCCceEEECCCCCcCC---------------ChhHHHHHHHHHHhcceeHHHHHHHHHHC--
Confidence 7899999999999999999999999999999998 77888999999999999999999999997
Q ss_pred CCccCcEEEeCCCHHHHHHHHHHhhhcC
Q psy13429 81 GNHFPRTFECGPGKSLVTILNQVNKKAG 108 (116)
Q Consensus 81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~ 108 (116)
|+ +.|||+|||++|++++|++.++..
T Consensus 272 g~--~~fvEiGP~~~L~~~~~~~~~~~~ 297 (316)
T 3tqe_A 272 GI--KVFMECGPDNKLAGLIKRIDRQSE 297 (316)
T ss_dssp TC--CEEEECSSSSHHHHHHHHHCTTCE
T ss_pred CC--CEEEEECCcHHHHHHHHHhcCCCC
Confidence 88 556999999999999999987653
No 8
>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=99.84 E-value=7.5e-21 Score=148.75 Aligned_cols=88 Identities=33% Similarity=0.440 Sum_probs=82.0
Q ss_pred CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429 1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ 80 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~ 80 (116)
|+|+.++|++.++++.+++|++|++||++|+++. +.+.+++||.+|+++||+|.++++.|.+.
T Consensus 198 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~~v~~l~~~-- 260 (305)
T 2cuy_A 198 MAPARKRLAEDLAQVPLRRPRFPVYSNVTARPEE---------------DPERIRALLLEQITAPVRWVEILRDMEAR-- 260 (305)
T ss_dssp GHHHHHHHHHHHTTCCCCCCSSCEECTTTSSEEC---------------CHHHHHHHHHHGGGSCBCHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHhcCCCCCCCeeEEECCCCCccC---------------ChhHHHHHHHHHHhhhCcHHHHHHHHHhC--
Confidence 7899999999999999999999999999999998 77888999999999999999999999987
Q ss_pred CCccCcEEEeCCCHHHHHHHHHHhhhc
Q psy13429 81 GNHFPRTFECGPGKSLVTILNQVNKKA 107 (116)
Q Consensus 81 g~~f~~~iEiGPg~~L~~l~k~~~~~~ 107 (116)
|+ +.|||+|||++|+++++++.++.
T Consensus 261 g~--~~~vEiGP~~~L~~~~~~~~~~~ 285 (305)
T 2cuy_A 261 GV--KRFLEFGSGEVLKGLVLRTLKEA 285 (305)
T ss_dssp TC--CEEEEESSCSHHHHHHHHHCSSC
T ss_pred CC--CEEEEeCCcHHHHHHHHHhcCCC
Confidence 88 55699999999999999997543
No 9
>2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophili fatty acids biosynthesis; 2.30A {Mycobacterium tuberculosis} PDB: 2qj3_A
Probab=99.84 E-value=3.8e-21 Score=150.27 Aligned_cols=89 Identities=27% Similarity=0.312 Sum_probs=82.9
Q ss_pred CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429 1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ 80 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~ 80 (116)
|+|+.++|++.++++.+++|++|++||++|+++. +.+.+++||.+|+++||+|.++++.|.+.
T Consensus 199 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~~i~~l~~~-- 261 (303)
T 2qc3_A 199 MAPALDGFAAAAANIATADPTATLLSNRDGKPVT---------------SAAAAMDTLVSQLTQPVRWDLCTATLREH-- 261 (303)
T ss_dssp GGGGHHHHHHHHHTSCCCCCSSEEBCTTTSCBCC---------------SHHHHHHHHHHGGGSCEEHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHHhCCCCCCCeEEEECCCCCccC---------------CchHHHHHHHHHHhccEeHHHHHHHHHHC--
Confidence 7899999999999999999999999999999998 77888999999999999999999999998
Q ss_pred CCccCcEEEeCCCHHHHHHHHHHhhhcC
Q psy13429 81 GNHFPRTFECGPGKSLVTILNQVNKKAG 108 (116)
Q Consensus 81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~ 108 (116)
|+ +.|||+|||++|+++++++.++..
T Consensus 262 g~--~~~vEiGP~~~L~~~~~~~~~~~~ 287 (303)
T 2qc3_A 262 TV--TAIVEFPPAGTLSGIAKRELRGVP 287 (303)
T ss_dssp TE--EEEEECSSCCSHHHHHHHHSTTCC
T ss_pred CC--CEEEEECCHHHHHHHHHHhcCCCC
Confidence 88 555999999999999999987643
No 10
>3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens}
Probab=99.83 E-value=3.3e-21 Score=152.90 Aligned_cols=88 Identities=33% Similarity=0.493 Sum_probs=81.4
Q ss_pred CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429 1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ 80 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~ 80 (116)
|+|+.++|++.|+++.+++|++|++||++|+++. +.+.+++||.+|+++||+|.++++.|.+.
T Consensus 203 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~~v~~l~~~-- 265 (336)
T 3ptw_A 203 LQPAAEKLEDELNKISINKLNGIVMSNVKGEAYL---------------EDDNIIELLTSQVKKPVLFINDIEKMIES-- 265 (336)
T ss_dssp GHHHHHHHHHHHTTSCCCCCCSEEEETTTTEECC---------------TTSCHHHHHHHHTTSCBCHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHhcCCCCCCCceEEECCCCcccC---------------ChhhHHHHHHHHhhcceeHHHHHHHHHhC--
Confidence 7899999999999999999999999999999997 55668999999999999999999999998
Q ss_pred CCccCcEEEeCCCHHHHHHHHHHhhhc
Q psy13429 81 GNHFPRTFECGPGKSLVTILNQVNKKA 107 (116)
Q Consensus 81 g~~f~~~iEiGPg~~L~~l~k~~~~~~ 107 (116)
|+ +.|||+|||++|+++++++.++.
T Consensus 266 g~--~~fvEiGP~~~L~~~i~~~~~~~ 290 (336)
T 3ptw_A 266 GV--DTFIEIGPGKALSGFVKKINKNV 290 (336)
T ss_dssp TC--CEEEEESSCSHHHHHHHHHCSSS
T ss_pred CC--CEEEEeCCcHHHHHHHHHHcCCC
Confidence 88 55699999999999999997654
No 11
>1nm2_A Malonyl COA:acyl carrier protein malonyltransfera; alpha/beta hydrolase-like core; 2.00A {Streptomyces coelicolor} SCOP: c.19.1.1 d.58.23.1 PDB: 2cdh_4 2cf2_B
Probab=99.83 E-value=5.7e-21 Score=150.11 Aligned_cols=88 Identities=27% Similarity=0.379 Sum_probs=82.4
Q ss_pred CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429 1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ 80 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~ 80 (116)
|+|+.++|++.++++.+++|++|++||++|+++. +.+.+++||.+|+++||+|.++++.|.+.
T Consensus 206 m~~~~~~~~~~l~~~~~~~p~ipv~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~~v~~l~~~-- 268 (317)
T 1nm2_A 206 MAPAVDKLAEAAKALTPADPKVTYVSNKDGRAVA---------------SGTEVLDRLVGQVANPVRWDLCMETFKEL-- 268 (317)
T ss_dssp GHHHHHHHHHHHTTCCCCCCSSEEBCTTTSCBCC---------------CHHHHHHHHHHHTTSCEEHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHHhCCCCCCCceEEECCCCcccc---------------CchhHHHHHHHHhhCcEeHHHHHHHHHhC--
Confidence 7899999999999999999999999999999998 77888999999999999999999999987
Q ss_pred CCccCcEEEeCCCHHHHHHHHHHhhhc
Q psy13429 81 GNHFPRTFECGPGKSLVTILNQVNKKA 107 (116)
Q Consensus 81 g~~f~~~iEiGPg~~L~~l~k~~~~~~ 107 (116)
|+ +.|||+|||++|+++++++.++.
T Consensus 269 g~--~~~vEiGP~~~L~~~~~~~~~~~ 293 (317)
T 1nm2_A 269 GV--TAIIEVCPGGTLTGLAKRALPGV 293 (317)
T ss_dssp TC--CEEEECSSCSHHHHHHHHHSTTC
T ss_pred CC--CEEEEECChHHHHHHHHHhcCCC
Confidence 88 55699999999999999998654
No 12
>1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A*
Probab=99.83 E-value=7.4e-21 Score=148.87 Aligned_cols=87 Identities=33% Similarity=0.596 Sum_probs=81.6
Q ss_pred CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429 1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ 80 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~ 80 (116)
|+|+.++|++.++++.+++|++|++||++|+++. +.+.+++||.+|+++||+|.++++.|.+.
T Consensus 205 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~~v~~l~~~-- 267 (309)
T 1mla_A 205 MKPAADKLAVELAKITFNAPTVPVVNNVDVKCET---------------NGDAIRDALVRQLYNPVQWTKSVEYMAAQ-- 267 (309)
T ss_dssp GHHHHHHHHHHHHTSCCCCCSSCBBCTTTCCBCC---------------SHHHHHHHHHHHHHSCEEHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHhcCCCCCCCceEEECCCCCccc---------------ChHHHHHHHHHHHhccEeHHHHHHHHHhC--
Confidence 7899999999999999999999999999999998 77888999999999999999999999987
Q ss_pred CCccCcEEEeCCCHHHHHHHHHHhhh
Q psy13429 81 GNHFPRTFECGPGKSLVTILNQVNKK 106 (116)
Q Consensus 81 g~~f~~~iEiGPg~~L~~l~k~~~~~ 106 (116)
|+ +.|||+|||++|+++++++.++
T Consensus 268 g~--~~~vEiGP~~~L~~~~~~~~~~ 291 (309)
T 1mla_A 268 GV--EHLYEVGPGKVLTGLTKRIVDT 291 (309)
T ss_dssp TC--CEEEECSSSSHHHHHHHHHCTT
T ss_pred CC--CEEEEECCcHHHHHHHHHhcCC
Confidence 88 5569999999999999999754
No 13
>3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae}
Probab=99.83 E-value=5.7e-21 Score=149.37 Aligned_cols=87 Identities=24% Similarity=0.490 Sum_probs=80.3
Q ss_pred CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429 1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ 80 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~ 80 (116)
|+|+.++|++.++++.+++|++|++||++|+++. .+.+++||.+|+++||+|.++++.|.+.
T Consensus 203 m~~~~~~~~~~l~~~~~~~p~ip~~S~~tg~~~~----------------~~~~~~~~~~~l~~pV~f~~~v~~l~~~-- 264 (307)
T 3im8_A 203 LEPASQKLAETLAQVSFSDFTCPLVGNTEAAVMQ----------------KEDIAQLLTRQVKEPVRFYESIGVMQEA-- 264 (307)
T ss_dssp GHHHHHHHHHHHHTCCCCCCSSCBBCTTTSSBCC----------------GGGHHHHHHHHTTSCEEHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEcCCCccCC----------------hhHHHHHHHHHhhhheeHHHHHHHHHhC--
Confidence 7899999999999999999999999999999875 4557999999999999999999999998
Q ss_pred CCccCcEEEeCCCHHHHHHHHHHhhhc
Q psy13429 81 GNHFPRTFECGPGKSLVTILNQVNKKA 107 (116)
Q Consensus 81 g~~f~~~iEiGPg~~L~~l~k~~~~~~ 107 (116)
|+ +.|||+|||++|+++++++.++.
T Consensus 265 g~--~~~iEiGP~~~L~~~~~~~~~~~ 289 (307)
T 3im8_A 265 GI--SNFIEIGPGKVLSGFVKKIDQTA 289 (307)
T ss_dssp TC--CEEEEESSCSHHHHHHHHHCTTS
T ss_pred CC--CEEEEECCcHHHHHHHHHhcCCC
Confidence 88 55699999999999999998764
No 14
>2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori}
Probab=99.81 E-value=2.2e-20 Score=147.44 Aligned_cols=86 Identities=20% Similarity=0.291 Sum_probs=79.5
Q ss_pred CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429 1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ 80 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~ 80 (116)
|+|+.++|++.|+++.+++|++|++||++|+++. +.+.+++||.+|+++||+|.++++.|.+.
T Consensus 214 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~ai~~l~~~-- 276 (321)
T 2h1y_A 214 LEPMIFKFQELLEKSLKDKFHFEIISNATNEAYH---------------NKAKAVELLSLQLTQPVRYQDCVKSNNDR-- 276 (321)
T ss_dssp GGGGHHHHHHHHHHHCCSCCSSEEECTTTSCEEC---------------SHHHHHHHHHHHTTSCBCHHHHHHTTGGG--
T ss_pred HHHHHHHHHHHHhcCCCCCCCceEEECCCCCccC---------------ChhhHHHHHHHHHhccCcHHHHHHHHHhc--
Confidence 7999999999999999999999999999999998 77888999999999999999999999874
Q ss_pred CCccCcEEEeCCCHHHHHHHHHHhhhc
Q psy13429 81 GNHFPRTFECGPGKSLVTILNQVNKKA 107 (116)
Q Consensus 81 g~~f~~~iEiGPg~~L~~l~k~~~~~~ 107 (116)
+ +.|||+|||++|+++++++ ++.
T Consensus 277 -~--~~fvEiGP~~~L~~~i~~~-~~~ 299 (321)
T 2h1y_A 277 -V--DIFFELGCGSVLKGLNKRL-SNK 299 (321)
T ss_dssp -C--SEEEEESSSSHHHHHHHTT-CSS
T ss_pred -C--CEEEEECChHHHHHHHHhC-CCC
Confidence 4 5569999999999999998 543
No 15
>3tzy_A Polyketide synthase PKS13; acyltransferase, long fatty acid chain transferase, acyl CAR protein, transferase; HET: PLM; 2.20A {Mycobacterium tuberculosis} PDB: 3tzw_A 3tzx_A* 3tzz_A*
Probab=99.77 E-value=8e-19 Score=145.60 Aligned_cols=94 Identities=15% Similarity=0.138 Sum_probs=79.9
Q ss_pred CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429 1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ 80 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~ 80 (116)
|+|+.++|++.|+.+.+++|++|++||++|..+... ..+....++||.+|+++||+|.++|+.|.+.
T Consensus 342 m~~~~~~~~~~l~~i~~~~p~ip~~S~vt~~~~~~~-----------~~~~~~~~~yw~~~l~~pV~F~~av~~l~~~-- 408 (491)
T 3tzy_A 342 MDPLLGELTAELQGIKPTSPTCGIFSTVHEGRYIKP-----------GGEPIHDVEYWKKGLRHSVYFTHGIRNAVDS-- 408 (491)
T ss_dssp GGGGHHHHHHHTTTCCCCCCSSEEEETTTTTEEECT-----------TCCCCCSHHHHHHHHHSCBCHHHHHHHHHHT--
T ss_pred hhhhHHHHHHHHhcCCCCCCCccEEEeccCCcccCC-----------CcchhcCHHHHHHHhhccccHHHHHHHHHHC--
Confidence 899999999999999999999999999998766410 0011234799999999999999999999998
Q ss_pred CCccCcEEEeCCCHHHHHHHHHHhhhcCC
Q psy13429 81 GNHFPRTFECGPGKSLVTILNQVNKKAGD 109 (116)
Q Consensus 81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~~ 109 (116)
|+ +.|||||||++|+++++++.++.+.
T Consensus 409 g~--~~fvEiGP~~vL~~~i~~~l~~~~~ 435 (491)
T 3tzy_A 409 GH--TTFLELAPNPVALMQVALTTADAGL 435 (491)
T ss_dssp TC--CEEEECSSSCHHHHHHHHHHHHTTC
T ss_pred CC--CEEEEeCCCHHHHHHHHHHhhhcCC
Confidence 88 5569999999999999999876543
No 16
>3g87_A Malonyl COA-acyl carrier protein transacylase; ssgcid, niaid, decode biostructures, dried seaweed, acyltran transferase; 2.30A {Burkholderia pseudomallei}
Probab=99.77 E-value=3.8e-19 Score=144.02 Aligned_cols=92 Identities=27% Similarity=0.451 Sum_probs=80.0
Q ss_pred CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429 1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ 80 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~ 80 (116)
|+|+.++|++.++.+.+++|++|++||++|+++. + +.+++||.+|+++||+|.++++.|.+.
T Consensus 200 m~~~~~~~~~~l~~~~~~~p~ipv~S~vtg~~~~---------------~-~~~~~~~~~~l~~pV~f~~av~~l~~~-- 261 (394)
T 3g87_A 200 MRPAQQAFAAHLQSFRLADPAIPVISNVSARPYE---------------N-GRVSEGLAQQIASPVRWCESIRYLLAL-- 261 (394)
T ss_dssp GHHHHHHHHHHHTTSCCCCCSSCEECTTTSSBCC---------------T-TCHHHHHHHGGGSCBCHHHHHHHHHHH--
T ss_pred hhhhHHHHHHHHhcCCCCCCCceEEECCCCcCCC---------------c-hHHHHHHHHHHhCceeHHHHHHHHHhc--
Confidence 7899999999999999999999999999999986 3 456899999999999999999999875
Q ss_pred CC---ccCcEEEeCCCHHHHHHHHHHhhhcCCC
Q psy13429 81 GN---HFPRTFECGPGKSLVTILNQVNKKAGDS 110 (116)
Q Consensus 81 g~---~f~~~iEiGPg~~L~~l~k~~~~~~~~~ 110 (116)
|+ ..+.|||+|||++|+++++++.++....
T Consensus 262 g~~~~~~~~fvEiGP~~~L~~li~~il~~~~~~ 294 (394)
T 3g87_A 262 AAERGEAIEFTELGHGDVLTRLVHTIRRQTPAP 294 (394)
T ss_dssp HHHTTCCEEEEECSSSSHHHHHHHHHHHSSCC-
T ss_pred CCCcCCCCEEEEeCCcHHHHHHHHHHhccCCcc
Confidence 32 0134599999999999999999876543
No 17
>4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A
Probab=99.70 E-value=1.1e-17 Score=135.26 Aligned_cols=80 Identities=26% Similarity=0.368 Sum_probs=72.6
Q ss_pred CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429 1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ 80 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~ 80 (116)
|+|+.++|++.++.+.+++|++|++||++|+ +. +.+.+++||.+|+++||+|.++++.|.
T Consensus 282 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~-~~---------------~~~~~~~y~~~~l~~pV~f~~av~~l~---- 341 (401)
T 4amm_A 282 MAPAAEALRRAAGRLPWRRPERPVASTVTGA-WW---------------ADEDPVEVLVRQLTGPVRFREALGLLD---- 341 (401)
T ss_dssp GHHHHHHHHHHHHTSCCCCCSSCEECTTTSS-BC---------------CSCCHHHHHHHHHHSCEEHHHHHHHSC----
T ss_pred HHHHHHHHHHHHhhCCCCCCCceEEECCCCC-cC---------------ChhHHHHHHHHHHHHHeeHHHHHHHhc----
Confidence 7899999999999999999999999999999 66 445568999999999999999999987
Q ss_pred CCccCcEEEeCCCHHHHHHHHHHh
Q psy13429 81 GNHFPRTFECGPGKSLVTILNQVN 104 (116)
Q Consensus 81 g~~f~~~iEiGPg~~L~~l~k~~~ 104 (116)
+ +.|||+|||++|+++ +++.
T Consensus 342 -~--~~fvEiGP~~~L~~~-~~~~ 361 (401)
T 4amm_A 342 -A--DLLVEVGPGRMLSAL-AEAA 361 (401)
T ss_dssp -C--SEEEECSSSSHHHHH-HHHT
T ss_pred -C--CEEEEeCCcHHHHHH-Hhcc
Confidence 2 445999999999999 9986
No 18
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=99.68 E-value=3.7e-17 Score=143.64 Aligned_cols=88 Identities=15% Similarity=0.168 Sum_probs=80.6
Q ss_pred CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429 1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ 80 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~ 80 (116)
|+|+.++|++.|+.+.+++|++|++||++|+++. +.+..++||.+|+++||+|.++++.|.+.
T Consensus 733 m~~~~~~~~~~l~~i~~~~p~ip~~S~vtg~~~~---------------~~~~~~~yw~~~l~~pV~F~~av~~l~~~-- 795 (915)
T 2qo3_A 733 IERVREELLETTGDIAPRPARVTFHSTVESRSMD---------------GTELDARYWYRNLRETVRFADAVTRLAES-- 795 (915)
T ss_dssp GTTTHHHHHHHHTTCCCCCCSSEEECTTTCSEEC---------------GGGCCHHHHHHHHHSCEEHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHhccCCCCCCCeEEeCCCCcccC---------------cccCCHHHHHHHhhCcCCHHHHHHHHHhC--
Confidence 7899999999999999999999999999999987 44456899999999999999999999987
Q ss_pred CCccCcEEEeCCCHHHHHHHHHHhhhc
Q psy13429 81 GNHFPRTFECGPGKSLVTILNQVNKKA 107 (116)
Q Consensus 81 g~~f~~~iEiGPg~~L~~l~k~~~~~~ 107 (116)
|+ +.|||+|||++|+++++++++..
T Consensus 796 g~--~~fvEiGP~~~L~~~~~~~l~~~ 820 (915)
T 2qo3_A 796 GY--DAFIEVSPHPVVVQAVEEAVEEA 820 (915)
T ss_dssp TC--CEEEECSSSCSSHHHHHHHHHTS
T ss_pred CC--CEEEEeCCChhhhhhHHHhhhhc
Confidence 87 55699999999999999998764
No 19
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=99.67 E-value=6.7e-17 Score=142.03 Aligned_cols=89 Identities=15% Similarity=0.060 Sum_probs=80.7
Q ss_pred CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429 1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ 80 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~ 80 (116)
|+|+.++|++.++.+.+++|++|++||++|+++. +.+..++||.+|+++||+|.++++.|.+.
T Consensus 749 m~~~~~~~~~~l~~i~~~~p~ip~~S~vtg~~~~---------------~~~~~~~yw~~~l~~pV~F~~av~~l~~~-- 811 (917)
T 2hg4_A 749 VESLREELLTELAGISPVSADVALYSTTTGQPID---------------TATMDTAYWYANLREQVRFQDATRQLAEA-- 811 (917)
T ss_dssp GGGGHHHHHHHSTTCCCCCCSSEECCTTTSSCCC---------------GGGCSHHHHHHHHHSCCCHHHHHHHHHHT--
T ss_pred hHHHHHHHHHHHhcCCCCCCcceEEecCCCcccC---------------cccCCHHHHHHHhhCcccHHHHHHHHHhC--
Confidence 8899999999999999999999999999999886 44446899999999999999999999987
Q ss_pred CCccCcEEEeCCCHHHHHHHHHHhhhcC
Q psy13429 81 GNHFPRTFECGPGKSLVTILNQVNKKAG 108 (116)
Q Consensus 81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~ 108 (116)
|+ +.|||+|||++|+++++++++..+
T Consensus 812 g~--~~fvEiGP~~~L~~~~~~~l~~~~ 837 (917)
T 2hg4_A 812 GF--DAFVEVSPHPVLTVGIEATLDSAL 837 (917)
T ss_dssp TC--CEEEECSSSCSSHHHHHHHHHHHS
T ss_pred CC--CEEEEeCCChHHHHHHHHHHhhcc
Confidence 87 556999999999999999987643
No 20
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.48 E-value=1.8e-14 Score=138.08 Aligned_cols=102 Identities=18% Similarity=0.216 Sum_probs=79.7
Q ss_pred CccchHHHHHHHhcC-----CCCCCCccEEeCCCCccccccc-----------cc-hhhhcccccC---C-HHH-----H
Q psy13429 1 MVPAVEPFALALKKA-----TINDMIIPVHSNVDGKIYRGEN-----------KE-VSLSVSSLFR---D-ANH-----I 54 (116)
Q Consensus 1 M~pa~~~~~~~l~~~-----~~~~p~ipviSnv~g~~~~~~~-----------~~-~~~~~~~~~~---~-~~~-----i 54 (116)
|+|+.++|+++|+++ .++.|.+|++||++|+++.... .+ +.-...+|++ + ++. +
T Consensus 1586 m~p~~~~~~~~L~~~~~~~~~~~~p~ip~iSnvtg~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~~w~~~~~~~l~~~~~ 1665 (3089)
T 3zen_D 1586 LRVGVADFRRSLERVMPRDKDPELIIGRYIPNLVPRPFTLDRDFIQEIRDLVPAEPLDEVLADYDTWRNEKPKELCRKVV 1665 (3089)
T ss_dssp CGGGHHHHHHHHHHHSCSCCCHHHHTTTEECSSSCSCCCCSHHHHHHHHHHSCCHHHHHHHHCCCCCSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCCCCCCCCCceEEeCCCCceeeccccccccccccccccccccccCChHHhhhcchhhhhhhhH
Confidence 899999999999998 4556889999999999986210 00 1112223333 3 334 6
Q ss_pred HhHHHHhhcCCcCHHHHHHHHHh------CCCCCccCcEEEeCCCH--HHHHHHHHHhhh
Q psy13429 55 RRQLPKQIYKPVCWEQTLHILYE------RPQGNHFPRTFECGPGK--SLVTILNQVNKK 106 (116)
Q Consensus 55 ~~~l~~ql~~PV~w~~~i~~l~~------~~~g~~f~~~iEiGPg~--~L~~l~k~~~~~ 106 (116)
++||++|+++||+|.++++.|.+ . |+ +.|||+|||+ +|++|++++++.
T Consensus 1666 ~e~l~~ql~~PVrf~~av~~l~~~~~~~~~--g~--~~fvEiGPg~~p~L~~lvk~~l~~ 1721 (3089)
T 3zen_D 1666 IELLAWQFASPVRWIETQDLLFIEEAAGGL--GV--ERFVEIGVKSAPTVAGLATNTLKL 1721 (3089)
T ss_dssp HHHHHTTTTSCEEHHHHHHHHHHHHHHHCC--CC--EEEEECSGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCcchHHHHHHHHHhhccccCC--CC--cEEEEECCCChhhhhhHHHHhhcc
Confidence 79999999999999999999998 4 77 5569999999 999999999964
No 21
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=99.43 E-value=3.2e-14 Score=130.62 Aligned_cols=85 Identities=27% Similarity=0.459 Sum_probs=74.6
Q ss_pred CccchHHHHHHHh--cCCC--CCCCccEEeCCCCccccccccchhhhcccccCCH-HHHHhHHHHhhc-CCcCHHHHHHH
Q psy13429 1 MVPAVEPFALALK--KATI--NDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDA-NHIRRQLPKQIY-KPVCWEQTLHI 74 (116)
Q Consensus 1 M~pa~~~~~~~l~--~~~~--~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~-~~i~~~l~~ql~-~PV~w~~~i~~ 74 (116)
|+|+++.|++.|+ ++.+ ++|++|++||++|+.+. +. +.+++||.+|++ +||+|.++++.
T Consensus 432 MepAaeeL~e~L~~~~I~f~~~~P~IPVySnVTG~~l~---------------~~~e~IaeyLvrQL~rsPVrF~qAVe~ 496 (2006)
T 2pff_B 432 LVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLR---------------VLSGSISERIVDCIIRLPVKWETTTQF 496 (2006)
T ss_dssp SCTTHHHHHHHHHTSTTCCCCTTCCSCCCCSSSCCCSC---------------CCSSCSTTHHHHTTTTSCCCTHHHHCC
T ss_pred HHHHHHHHHHHhccCCccccCCCCCeEEEECCcCCCCC---------------ChHHHHHHHHHhcccCCCEehHHHHhc
Confidence 8999999999999 9999 99999999999999987 44 567899999999 99999999976
Q ss_pred HHhCCCCCccCcEEEeCCCHH--HHHHHHHHhhhcC
Q psy13429 75 LYERPQGNHFPRTFECGPGKS--LVTILNQVNKKAG 108 (116)
Q Consensus 75 l~~~~~g~~f~~~iEiGPg~~--L~~l~k~~~~~~~ 108 (116)
|+ +.|||+|||++ |+++++++..+.+
T Consensus 497 ------Gv--t~FVEIGPG~vSGLtgLIkrIL~G~G 524 (2006)
T 2pff_B 497 ------KA--THILDFGPGGASGLGVLTHRNKDGTG 524 (2006)
T ss_dssp ------CC--SCCEECCSSGGGSSTTHHHHHCSSSC
T ss_pred ------CC--CEEEEECCCCHHHHHHHHHHHhcCCC
Confidence 56 33499999999 9999999974433
No 22
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=99.42 E-value=9e-14 Score=129.98 Aligned_cols=83 Identities=27% Similarity=0.438 Sum_probs=74.3
Q ss_pred CccchHHHHHHHh--cCCC--CCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhc-CCcCHHHHHHHH
Q psy13429 1 MVPAVEPFALALK--KATI--NDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIY-KPVCWEQTLHIL 75 (116)
Q Consensus 1 M~pa~~~~~~~l~--~~~~--~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~-~PV~w~~~i~~l 75 (116)
|+|+++.|++.|+ ++.| ++|++|++||++|+.+.. +.+.++++|.+|++ +||+|.++++.
T Consensus 432 M~pa~~~l~~~L~~~~i~~~~~~p~iPv~SnvtG~~~~~--------------~~~~i~~~L~~qi~~~PV~w~~av~~- 496 (2051)
T 2uv8_G 432 LVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRV--------------LSGSISERIVDCIIRLPVKWETTTQF- 496 (2051)
T ss_dssp THHHHHHHHHHHHSSSCCCCTTTCCSCBBCTTTCSBSSS--------------CSSCHHHHHHHHHHTSCBCHHHHTCC-
T ss_pred hHHHHHHHHHHHHhCCccccCCCCcceEEECCCCcccCC--------------chHHHHHHHHHhhccCccchHHHhcc-
Confidence 8899999999999 8999 999999999999999972 25678999999999 99999999974
Q ss_pred HhCCCCCccCcEEEeCCCHH--HHHHHHHHhh
Q psy13429 76 YERPQGNHFPRTFECGPGKS--LVTILNQVNK 105 (116)
Q Consensus 76 ~~~~~g~~f~~~iEiGPg~~--L~~l~k~~~~ 105 (116)
|+ +.|||+|||++ |++|++++..
T Consensus 497 -----G~--~~fvEiGPG~~sgLt~L~kril~ 521 (2051)
T 2uv8_G 497 -----KA--THILDFGPGGASGLGVLTHRNKD 521 (2051)
T ss_dssp -----CC--SEEEECSSSGGGSHHHHHHHHHT
T ss_pred -----CC--CEEEEcCCCChHHHHHHHHHhhc
Confidence 66 55599999999 9999999974
No 23
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=99.29 E-value=1.1e-12 Score=115.84 Aligned_cols=86 Identities=17% Similarity=0.125 Sum_probs=69.6
Q ss_pred CccchHHHHHHHhcCC--CCCCCccEEeCCCCccccccccchhhhcccccCCH-HH--HHhHHHHhhcCCcCHHHHHHHH
Q psy13429 1 MVPAVEPFALALKKAT--INDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDA-NH--IRRQLPKQIYKPVCWEQTLHIL 75 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~--~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~-~~--i~~~l~~ql~~PV~w~~~i~~l 75 (116)
|+|+.++|++.|+++. ...+.+|++|++++..... +. .. .++||.+|+++||+|.++++.|
T Consensus 689 m~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~--------------~~~~~~~~~~yw~~~l~~pV~F~~av~~l 754 (965)
T 3hhd_A 689 MEAIAPPLLQELKKVIREPKPRSARWLSTSIPEAQWH--------------SSLARTSSAEYNVNNLVSPVLFQEALWHV 754 (965)
T ss_dssp GGGGHHHHHHHHHHHCSSCCBCCTTBCCSSSCGGGTT--------------SHHHHBCCHHHHHHHHHSCBCHHHHHTTS
T ss_pred hcccHHHHHHHHHHhhccCCCCcceEEeeeccccccc--------------ccchhcccHHHHHHHhhCcEeHHHHHHHH
Confidence 8999999999999974 3457789999999764431 11 22 4789999999999999999998
Q ss_pred HhCCCCCccCcEEEeCCCHHHHHHHHHHhhh
Q psy13429 76 YERPQGNHFPRTFECGPGKSLVTILNQVNKK 106 (116)
Q Consensus 76 ~~~~~g~~f~~~iEiGPg~~L~~l~k~~~~~ 106 (116)
.+. + .| ||+|||++|+++++++.+.
T Consensus 755 ~~~--~-~f---vEiGP~~~L~~~~~~~l~~ 779 (965)
T 3hhd_A 755 PEH--A-VV---LEIAPHALLQAVLKRGLKP 779 (965)
T ss_dssp CTT--C-EE---EEESSSCTTHHHHHHHSCT
T ss_pred hcC--C-EE---EEeCChHHHHHHHHHHhCC
Confidence 754 3 45 9999999999999998753
No 24
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=99.27 E-value=9.2e-13 Score=123.41 Aligned_cols=88 Identities=22% Similarity=0.349 Sum_probs=75.3
Q ss_pred CccchHHHHHHHhcCCC--CCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhc-CCcCHHHHHHHHHh
Q psy13429 1 MVPAVEPFALALKKATI--NDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIY-KPVCWEQTLHILYE 77 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~--~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~-~PV~w~~~i~~l~~ 77 (116)
|+|+.+.|.+.++.+.+ ++|++|++||++|+++... +.+.+.++|.+|++ +||+|.++++.+
T Consensus 426 m~~a~~~l~~~l~~i~~~~~~p~iPv~S~vtG~~~~~~-------------~~~~l~~~l~~qi~~~PV~w~~av~~l-- 490 (2060)
T 2uva_G 426 LAGAHAHILGDVDDMKIPASSLVIPVYDTKTGQDLREL-------------GDEDIIPELVRMITYDPVNWETATVFP-- 490 (2060)
T ss_dssp SHHHHHHHHHHTSSSCCCGGGCSSCBBCSSSCCBGGGS-------------SSCCSHHHHHHHHHTSCBCHHHHTCCS--
T ss_pred HHHHHHHHHHHHhhCCccCCCCCcEEEECCCCCccCcC-------------ChhHHHHHHHHHhccCcEeHHHHHHhc--
Confidence 78999999999999999 8999999999999998720 14557899999999 999999999854
Q ss_pred CCCCCccCcEEEeCCCHH--HHHHHHHHhhhcC
Q psy13429 78 RPQGNHFPRTFECGPGKS--LVTILNQVNKKAG 108 (116)
Q Consensus 78 ~~~g~~f~~~iEiGPg~~--L~~l~k~~~~~~~ 108 (116)
|. +.|||+|||++ |++|++++..+.+
T Consensus 491 ---g~--~~~IEiGPg~~s~L~~L~~~~l~g~g 518 (2060)
T 2uva_G 491 ---DA--THIVDFGPGGVSGIGVLTNRNKDGTG 518 (2060)
T ss_dssp ---SC--SEEEECSSSTTTSHHHHHHHHTTTTT
T ss_pred ---CC--CEEEEeCCCChHHHHHHHHHhhcCCC
Confidence 55 45599999999 9999999965443
No 25
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=99.11 E-value=1.7e-11 Score=116.34 Aligned_cols=89 Identities=15% Similarity=0.116 Sum_probs=69.7
Q ss_pred CccchHHHHHHHhcCCCC--CCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhC
Q psy13429 1 MVPAVEPFALALKKATIN--DMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYER 78 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~~--~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~ 78 (116)
|+|+.++|.+.|+.+.+. ++.+|++|+++|.....+ . . .....++||++|+++||+|.++++.|.+.
T Consensus 687 m~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~--------~-~--~~~~~~~yw~~~l~~pV~F~~av~~l~~~ 755 (2512)
T 2vz8_A 687 MESIAPTLLRQLRKVILDPKPRSKRWLSTSIPEAQWQG--------S-L--ARTFSAEYSVNNLVSPVLFQEALQHVPAH 755 (2512)
T ss_dssp GTTTHHHHHHHHHHHSCSCCBCCTTEECSSSCGGGTTS--------S-S--TTBCCHHHHHHHHHSCEEHHHHHTTSCSS
T ss_pred HHhHHHHHHHHHHhccccCCCCCceEEEeecCCCcccC--------c-c--cccCCHHHHHHHhhccccHHHHHHhhhcC
Confidence 899999999999997653 567889999998764310 0 0 01113689999999999999999998643
Q ss_pred CCCCccCcEEEeCCCHHHHHHHHHHhhh
Q psy13429 79 PQGNHFPRTFECGPGKSLVTILNQVNKK 106 (116)
Q Consensus 79 ~~g~~f~~~iEiGPg~~L~~l~k~~~~~ 106 (116)
+ .| ||+|||++|+++++++.+.
T Consensus 756 --~-~f---vEiGP~~~L~~~~~~~l~~ 777 (2512)
T 2vz8_A 756 --A-VV---VEIAPHALLQAVLKRSLES 777 (2512)
T ss_dssp --C-EE---EECSSSCTTHHHHHHHSCT
T ss_pred --C-EE---EEECCcHHHHHHHHHHhcc
Confidence 2 35 9999999999999998753
No 26
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.03 E-value=1.3e-10 Score=111.99 Aligned_cols=76 Identities=16% Similarity=0.252 Sum_probs=64.2
Q ss_pred CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429 1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ 80 (116)
Q Consensus 1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~ 80 (116)
|+||++.|++.|+.+.|+ .+.++++|.+|+++||+|.++++.|.+.
T Consensus 301 M~~A~~~l~~~l~~~~~~--------------------------------~~~i~~~l~~ql~~PV~W~~~v~~l~~~-- 346 (3089)
T 3zen_D 301 LSDGIEIVGRWAETVGLD--------------------------------VELAKELTESILVRQVDWVDEITELHEA-- 346 (3089)
T ss_dssp GHHHHHHHHHHHHTTTTC--------------------------------CTTHHHHHHHHHTSCBCCHHHHHHHHTT--
T ss_pred hHHHHHHHHHHHHhCCCC--------------------------------HHHHHHHHHHHccCcEeHHHHHHHHHHC--
Confidence 778888888888877662 2346899999999999999999999987
Q ss_pred CCccCcEEEeCCCHHHHHHHHHHhhhcCCCcc
Q psy13429 81 GNHFPRTFECGPGKSLVTILNQVNKKAGDSAA 112 (116)
Q Consensus 81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~~~~~ 112 (116)
|+ +.|||+|||++|++|+|++.++.+...+
T Consensus 347 Gv--~~fiEiGPG~vL~~L~k~i~~g~gv~~v 376 (3089)
T 3zen_D 347 GA--RWILDLGPGDILTRLTAPVIRGLGIGIV 376 (3089)
T ss_dssp TC--CEEEECSSSSCSHHHHHHHHGGGSCEEE
T ss_pred CC--CEEEEECCchHHHHHHHHHcCCCCceEE
Confidence 88 5559999999999999999988765433
No 27
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=98.86 E-value=2e-09 Score=100.41 Aligned_cols=49 Identities=24% Similarity=0.435 Sum_probs=45.1
Q ss_pred HHhHHHHhhcCCcCHHHHHHHHH-hCCCCCccCcEEEeCCCHHHHHHHHHHhhh
Q psy13429 54 IRRQLPKQIYKPVCWEQTLHILY-ERPQGNHFPRTFECGPGKSLVTILNQVNKK 106 (116)
Q Consensus 54 i~~~l~~ql~~PV~w~~~i~~l~-~~~~g~~f~~~iEiGPg~~L~~l~k~~~~~ 106 (116)
+++.|++|+++||+|.++++.|. +. |+ ++|||+|||++|++|+|++.+.
T Consensus 14 i~~~L~~Q~~~PVrW~~t~~~l~~~~--gv--~~~iE~GPg~vL~gl~kr~~~~ 63 (1887)
T 2uv8_A 14 LTELLAYQFASPVRWIETQDVFLKDF--NT--ERVVEIGPSPTLAGMAQRTLKN 63 (1887)
T ss_dssp HHHHHHHTTTSCEEHHHHHHHHHHTS--CC--SEEEEESSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcHHHHHHHHHhcC--CC--cEEEEeCCchhhhchHHHhhhc
Confidence 58999999999999999999998 66 88 6669999999999999999875
No 28
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=97.71 E-value=3.2e-05 Score=72.65 Aligned_cols=50 Identities=22% Similarity=0.379 Sum_probs=44.0
Q ss_pred HHhHHHHhhcCCcCHHHHHHHHHhCCCCCccCcEEEeCCCHHHHHHHHHHhhh
Q psy13429 54 IRRQLPKQIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKK 106 (116)
Q Consensus 54 i~~~l~~ql~~PV~w~~~i~~l~~~~~g~~f~~~iEiGPg~~L~~l~k~~~~~ 106 (116)
+-+.|+-|+.+||||-+|-+.|... .++ .++|||||.++|++|.++.++.
T Consensus 14 l~eLla~qfaspvrwieTQd~l~~~-~~~--er~vEiGp~~tl~~ma~rt~~~ 63 (1878)
T 2uv9_A 14 LVELLAYQFAMPVRWIETQDVILAE-KRT--ERIVEIGPSDTLGGMARRTLQS 63 (1878)
T ss_dssp HHHHHHGGGGSCCCHHHHHHHHHTT-SCC--SEEECCSSSCTTHHHHHHHHHH
T ss_pred HHHHHHHHhhCcchhhhHHHHHccC-cCc--eEEEEECCcHHHHHHHHHHHHh
Confidence 4689999999999999999998853 366 7779999999999999998865
No 29
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=97.42 E-value=2.2e-05 Score=74.20 Aligned_cols=59 Identities=19% Similarity=0.165 Sum_probs=50.0
Q ss_pred CccchHHHHHHHhcC------CCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHH
Q psy13429 1 MVPAVEPFALALKKA------TINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHI 74 (116)
Q Consensus 1 M~pa~~~~~~~l~~~------~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~ 74 (116)
|+|++++|+++|+++ .++.|.+|++||++|+++. ...+.++.|.+|+.+| +|.++|+.
T Consensus 1992 m~~~~~~f~~~L~~~i~~~~i~~~~~~~p~isnvtg~~~~---------------~~~~~~~~l~~~~~sp-~~~~~l~~ 2055 (2060)
T 2uva_G 1992 LRSGVKPFRSFLLKKINKTTIDPSKLIGKYIPNVTAKPFE---------------ISKEYFEEVHRLTGSP-KIANILAN 2055 (2060)
T ss_dssp GGTTHHHHHHHHHHHCCGGGCCHHHHTTTEECSSSCSCCC---------------CSTTHHHHHHHHSCCH-HHHHHHHS
T ss_pred HHHHHHHHHHHHHhhcccccCCCCCCCceEEECCCCcccc---------------CCHHHHHHHHHhhCCC-cHHHHHHH
Confidence 789999999999884 6777999999999999998 4556777888888766 99999976
Q ss_pred H
Q psy13429 75 L 75 (116)
Q Consensus 75 l 75 (116)
+
T Consensus 2056 ~ 2056 (2060)
T 2uva_G 2056 W 2056 (2060)
T ss_dssp G
T ss_pred H
Confidence 4
No 30
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=97.31 E-value=4.3e-05 Score=72.30 Aligned_cols=60 Identities=13% Similarity=0.121 Sum_probs=49.9
Q ss_pred CccchHHHHHHHhcC------CCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHH
Q psy13429 1 MVPAVEPFALALKKA------TINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHI 74 (116)
Q Consensus 1 M~pa~~~~~~~l~~~------~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~ 74 (116)
|+|++++|+++|+++ .++.|.+|++||++|+++. ...+..+.+.+|+.+ ++|.++|+.
T Consensus 1981 m~p~~~~f~~~L~~~i~~~~i~~~~~~~p~iSnvtg~~~~---------------~~~~~~~~l~~~~~s-p~~~~~l~~ 2044 (2051)
T 2uv8_G 1981 LMNGVKPFKSFLKKNIIKENVKVARLAGKYIPNLTAKPFQ---------------VTKEYFQDVYDLTGS-EPIKEIIDN 2044 (2051)
T ss_dssp GSTTSTTHHHHHHTTSCGGGCCHHHHTTTEECSSSCSCCC---------------CSHHHHHHHHHHHCC-HHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcccccCCCCCCCCeEEECCCCceec---------------CCHHHHHHHHHhhCC-CcHHHHHHH
Confidence 789999999999984 5667889999999999998 556677888888755 599999976
Q ss_pred HH
Q psy13429 75 LY 76 (116)
Q Consensus 75 l~ 76 (116)
+.
T Consensus 2045 ~~ 2046 (2051)
T 2uv8_G 2045 WE 2046 (2051)
T ss_dssp TT
T ss_pred HH
Confidence 43
No 31
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=54.05 E-value=5.6 Score=31.31 Aligned_cols=18 Identities=17% Similarity=0.253 Sum_probs=13.1
Q ss_pred CcEEEeCCCH-HHHHHHHH
Q psy13429 85 PRTFECGPGK-SLVTILNQ 102 (116)
Q Consensus 85 ~~~iEiGPg~-~L~~l~k~ 102 (116)
+.+||||||. +||..+-+
T Consensus 60 ~~VlEIGPG~G~LT~~Ll~ 78 (353)
T 1i4w_A 60 LKVLDLYPGVGIQSAIFYN 78 (353)
T ss_dssp CEEEEESCTTCHHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHh
Confidence 4569999997 66665544
No 32
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=29.77 E-value=30 Score=24.10 Aligned_cols=32 Identities=25% Similarity=0.508 Sum_probs=24.1
Q ss_pred hHHHHhhcCCcCH----HHHHHHHHhCCCCCccCcEEEeC
Q psy13429 56 RQLPKQIYKPVCW----EQTLHILYERPQGNHFPRTFECG 91 (116)
Q Consensus 56 ~~l~~ql~~PV~w----~~~i~~l~~~~~g~~f~~~iEiG 91 (116)
-||.+|...||.| .++++..... |- ..+|.++
T Consensus 12 pyl~~ha~~~v~W~~~~~ea~~~A~~~--~K--pVlvdF~ 47 (173)
T 3ira_A 12 PYLLQHAYNPVDWYPWGEEAFEKARKE--NK--PVFLSIG 47 (173)
T ss_dssp HHHHTTTTSSSCCBCSSHHHHHHHHHH--TC--CEEEEEE
T ss_pred HHHHhccCCCCCCCCcCHHHHHHHHHh--CC--CEEEecc
Confidence 5999999999988 5777776655 54 4448876
No 33
>2krx_A ASL3597 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, unknown function; NMR {Nostoc SP}
Probab=25.91 E-value=43 Score=21.73 Aligned_cols=24 Identities=21% Similarity=0.333 Sum_probs=16.2
Q ss_pred CHHHHHHHHHhCCCCCccCcEEEeCCCHHH
Q psy13429 67 CWEQTLHILYERPQGNHFPRTFECGPGKSL 96 (116)
Q Consensus 67 ~w~~~i~~l~~~~~g~~f~~~iEiGPg~~L 96 (116)
--.+..+.|++. .+ + +|+|||..|
T Consensus 54 s~~~qaq~Lldt--~C--E--Lei~pG~~l 77 (94)
T 2krx_A 54 SLPAQAQHLIDT--SC--E--LDVGAGKYL 77 (94)
T ss_dssp CHHHHHHHHHHH--CC--C--EEEETTEEE
T ss_pred CHHHHHHHHHHh--ee--e--eeeCCCCEE
Confidence 345667777775 22 2 899999754
No 34
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=25.23 E-value=1e+02 Score=17.54 Aligned_cols=36 Identities=14% Similarity=0.125 Sum_probs=26.3
Q ss_pred CCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCc
Q psy13429 15 ATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPV 66 (116)
Q Consensus 15 ~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV 66 (116)
+....+.=||++-.+|..|. .+.|.+++.++-..||
T Consensus 8 Is~~~m~dPV~~~~sG~~ye----------------r~~I~~~l~~~~~cP~ 43 (61)
T 2bay_A 8 ISGKVPRRPVLSPKSRTIFE----------------KSLLEQYVKDTGNDPI 43 (61)
T ss_dssp TTCSCCSSEEEETTTTEEEE----------------HHHHHHHHHHHSBCTT
T ss_pred CCCCCCCCCEEeCCCCcEEc----------------HHHHHHHHHhCCCCcC
Confidence 45566677888877899886 4677777777766665
No 35
>3rt3_C NS1, NS1B, non-structural protein 1; ubiquitin-like domain, isgylation, antiviral protein-viral P complex; 2.01A {Influenza b virus} PDB: 1xeq_A 3sdl_A 3r66_A
Probab=25.03 E-value=23 Score=22.89 Aligned_cols=13 Identities=46% Similarity=0.772 Sum_probs=10.1
Q ss_pred EEEeCCCHHHHHH
Q psy13429 87 TFECGPGKSLVTI 99 (116)
Q Consensus 87 ~iEiGPg~~L~~l 99 (116)
-||+|||++-..+
T Consensus 9 qievgpg~tnati 21 (109)
T 3rt3_C 9 QIEVGPGATNATI 21 (109)
T ss_dssp CCCCCTTHHHHHH
T ss_pred eEEecCCCcccee
Confidence 3899999976554
No 36
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=22.80 E-value=50 Score=24.53 Aligned_cols=43 Identities=9% Similarity=-0.017 Sum_probs=16.8
Q ss_pred CHHHHHhHHHHhhcCCcCHHHHHHHHHhCCCCCccCcEEEeCCCHH
Q psy13429 50 DANHIRRQLPKQIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKS 95 (116)
Q Consensus 50 ~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~g~~f~~~iEiGPg~~ 95 (116)
.+...+..|.++....=.+.+.+-..+.-. .. ++++|+|+|..
T Consensus 12 ~~~~~~k~~Gq~fl~~~~i~~~i~~~~~~~-~~--~~VLDiG~G~G 54 (299)
T 2h1r_A 12 SGRENLYFQGQHLLKNPGILDKIIYAAKIK-SS--DIVLEIGCGTG 54 (299)
T ss_dssp -----------CEECCHHHHHHHHHHHCCC-TT--CEEEEECCTTS
T ss_pred ccccchhccccceecCHHHHHHHHHhcCCC-Cc--CEEEEEcCcCc
Confidence 344445556665543333444443333321 22 56699999974
No 37
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=22.75 E-value=45 Score=24.44 Aligned_cols=11 Identities=36% Similarity=0.737 Sum_probs=8.8
Q ss_pred CcEEEeCCCHH
Q psy13429 85 PRTFECGPGKS 95 (116)
Q Consensus 85 ~~~iEiGPg~~ 95 (116)
++++|+|||..
T Consensus 31 ~~VLEIG~G~G 41 (255)
T 3tqs_A 31 DTLVEIGPGRG 41 (255)
T ss_dssp CEEEEECCTTT
T ss_pred CEEEEEccccc
Confidence 55699999974
No 38
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=20.89 E-value=36 Score=24.90 Aligned_cols=14 Identities=36% Similarity=0.593 Sum_probs=10.3
Q ss_pred CcEEEeCCCH-HHHH
Q psy13429 85 PRTFECGPGK-SLVT 98 (116)
Q Consensus 85 ~~~iEiGPg~-~L~~ 98 (116)
++++|+|||. .|+.
T Consensus 23 ~~VLEIG~G~G~lt~ 37 (252)
T 1qyr_A 23 QAMVEIGPGLAALTE 37 (252)
T ss_dssp CCEEEECCTTTTTHH
T ss_pred CEEEEECCCCcHHHH
Confidence 5569999996 4554
Done!