BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1343
(337 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328703901|ref|XP_001946816.2| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like
[Acyrthosiphon pisum]
Length = 461
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/327 (80%), Positives = 291/327 (88%), Gaps = 12/327 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +VTPLRDYFL E NYA+VKRPPGDS FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 145 ALSNVTPLRDYFLDERNYAKVKRPPGDSVFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 204
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS K+FQFTEQ DPIDFLSWFLN+LHRALNG K + SSIVYKTF+GSM+VKTRKIP
Sbjct: 205 AVVLWSGKKFQFTEQGDPIDFLSWFLNSLHRALNGKKSRHSSIVYKTFMGSMRVKTRKIP 264
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
PVEL+EK R LL T+EY E +ESPFLYLTCDLPPPPLFKDEV+ENIIPQV+LY++LTK
Sbjct: 265 PVELDEKQRYSLLCTDEYAEHVSESPFLYLTCDLPPPPLFKDEVMENIIPQVSLYSLLTK 324
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FNNESEKEYKTYKENF+KRFEIT LPPYLILY+KRFTKNTFFVEKNPTIVNFPVKNVDFG
Sbjct: 325 FNNESEKEYKTYKENFMKRFEITQLPPYLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFG 384
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DILTPE VKA +++T YDL+ANIVHDGEP+ GTYRVH+ +G KWYE+
Sbjct: 385 DILTPE------------VKAAHKNTSYDLIANIVHDGEPNKGTYRVHVLKQGNSKWYEM 432
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRT 327
QDLHV+DILPQMITLTEAYIQIY+LRT
Sbjct: 433 QDLHVSDILPQMITLTEAYIQIYKLRT 459
>gi|307214210|gb|EFN89316.1| U4/U6.U5 tri-snRNP-associated protein 2 [Harpegnathos saltator]
Length = 509
Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/337 (78%), Positives = 286/337 (84%), Gaps = 15/337 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HVTPLRD+FLRE NY+ VKRPPGDSS+LLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 180 ALSHVTPLRDFFLRESNYSHVKRPPGDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 239
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS+K+FQFTEQ DP+DFLSWFLN LH ALNGTKK+DSSI+YKTFLG M++ TRKIP
Sbjct: 240 AVVLWSKKRFQFTEQGDPVDFLSWFLNALHLALNGTKKRDSSIIYKTFLGHMRIYTRKIP 299
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P+ELEE R LL T EY ET TESPFLYLTCDLPPPPLFKD+ ENIIPQVNLYT+L K
Sbjct: 300 PLELEESQRSELLHTVEYGETVTESPFLYLTCDLPPPPLFKDQFTENIIPQVNLYTLLNK 359
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENF+KRFEIT LPPYLILY+KRFTKNTFFVEKNPTIVNFPVKNVDFG
Sbjct: 360 FNAVTEKEYKTYKENFMKRFEITELPPYLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFG 419
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DILTPE VKAK+ T YDLVANIVHDGEP GTYRVH+ H+ G+WYE+
Sbjct: 420 DILTPE------------VKAKHPYTTYDLVANIVHDGEPGQGTYRVHILHRATGQWYEL 467
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPTAMSEG 337
QDLHVT ILPQMITLTEAYIQIYELR T M G
Sbjct: 468 QDLHVTQILPQMITLTEAYIQIYELR---KDTHMENG 501
>gi|307184634|gb|EFN70965.1| U4/U6.U5 tri-snRNP-associated protein 2 [Camponotus floridanus]
Length = 504
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 260/326 (79%), Positives = 285/326 (87%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HVTPLRD+FLRE NY+ V+RPPGDSS+LLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 176 ALSHVTPLRDFFLRESNYSHVRRPPGDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 235
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS+K+FQFTEQ DP+DFLSWFLN LH ALNGTKK+DSSI+YKTFLG M++ TRKIP
Sbjct: 236 AVVLWSKKRFQFTEQGDPVDFLSWFLNALHLALNGTKKRDSSIIYKTFLGHMRIYTRKIP 295
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P+ELEE R LL T EY ET TESPFLYLTCDLPPPPLFKD+ ENIIPQVNLYT+L K
Sbjct: 296 PLELEESQRSELLHTVEYGETVTESPFLYLTCDLPPPPLFKDQFTENIIPQVNLYTLLNK 355
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENF+KRFEIT LPPYLILY+KRFTKNTFFVEKNPTIVNFPVKNVDFG
Sbjct: 356 FNAITEKEYKTYKENFMKRFEITELPPYLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFG 415
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DILTPE+KAK+ +Y T YDLVANIVHDGEP GTYRVH+ H+ G+WYE+
Sbjct: 416 DILTPEIKAKH---LY---------TTYDLVANIVHDGEPGQGTYRVHILHRATGQWYEM 463
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDLHVT ILPQMITLTEAYIQIYELR
Sbjct: 464 QDLHVTQILPQMITLTEAYIQIYELR 489
>gi|242017490|ref|XP_002429221.1| U4/U6.U5 tri-snRNP-associated protein, putative [Pediculus humanus
corporis]
gi|212514110|gb|EEB16483.1| U4/U6.U5 tri-snRNP-associated protein, putative [Pediculus humanus
corporis]
Length = 482
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 260/325 (80%), Positives = 289/325 (88%), Gaps = 12/325 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV+PLR+YFLRE+NY++VKRPPGDSSFLLVQRFGEL+RKLWNPRNFK+HVSPHEMLQ
Sbjct: 161 ALSHVSPLRNYFLREVNYSKVKRPPGDSSFLLVQRFGELLRKLWNPRNFKAHVSPHEMLQ 220
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWSRK+FQFTEQ DPIDFLSWF+N+LH ALNGTKK DSSI+YK+FLGSM++ TRKIP
Sbjct: 221 AVVLWSRKKFQFTEQGDPIDFLSWFINSLHIALNGTKKPDSSIIYKSFLGSMRIYTRKIP 280
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P ELE+K + LLLT+EY+E TESPFLYLTCDLPPPPLFKDE +ENIIPQVNLYT+LTK
Sbjct: 281 PTELEDKQKVALLLTDEYQEKITESPFLYLTCDLPPPPLFKDEFMENIIPQVNLYTLLTK 340
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN EKEYKTYK+NFLKRFEIT LPPYLILY+KRFTKNTFFVEKNPTIVNFPVKNVDF
Sbjct: 341 FNGTQEKEYKTYKDNFLKRFEITVLPPYLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFA 400
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DI+T D VKA ++ T YDL+ANIVHDGEP+ GTYRVH+ HKG GKWYE+
Sbjct: 401 DIMT------------DDVKAMHKYTTYDLIANIVHDGEPNRGTYRVHVLHKGNGKWYEM 448
Query: 301 QDLHVTDILPQMITLTEAYIQIYEL 325
QDLHVTDILPQMITLTEAYIQIYEL
Sbjct: 449 QDLHVTDILPQMITLTEAYIQIYEL 473
>gi|332028251|gb|EGI68298.1| U4/U6.U5 tri-snRNP-associated protein 2 [Acromyrmex echinatior]
Length = 507
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 260/326 (79%), Positives = 282/326 (86%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HVTPLRD+FLRE NYA V+RPPGDSS+LLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 178 ALSHVTPLRDFFLRESNYAHVRRPPGDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 237
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS+K+FQFTEQ DP+DFLSWFLN LH ALNGTKK+DSSI+YKTFLG M++ TRKIP
Sbjct: 238 AVVLWSKKRFQFTEQGDPVDFLSWFLNALHLALNGTKKRDSSIIYKTFLGHMRIYTRKIP 297
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P+ELEE R LL T EY ET TESPFLYLTCDLPPPPLFKD+ ENIIPQVNLYT+L K
Sbjct: 298 PLELEESQRSELLHTVEYGETVTESPFLYLTCDLPPPPLFKDQFTENIIPQVNLYTLLNK 357
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENF+KRFEIT LPPYLILY+KRFTKNTFFVEKNPTIVNFPVKNVDFG
Sbjct: 358 FNAVTEKEYKTYKENFMKRFEITELPPYLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFG 417
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DILT E VKAK+ T YDLVANIVHDGEP GTYRVH+ HK G+WYE+
Sbjct: 418 DILTSE------------VKAKHPYTTYDLVANIVHDGEPGQGTYRVHILHKATGQWYEL 465
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDLHVT ILPQMITLTEAY+QIYELR
Sbjct: 466 QDLHVTQILPQMITLTEAYVQIYELR 491
>gi|322783229|gb|EFZ10815.1| hypothetical protein SINV_09876 [Solenopsis invicta]
Length = 539
Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust.
Identities = 261/337 (77%), Positives = 286/337 (84%), Gaps = 15/337 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HVTPLRD+FLRE NY+ V+RPPGDSS+LLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 210 ALSHVTPLRDFFLRESNYSHVRRPPGDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 269
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS+K+FQFTEQ DP+DFLSWFLN LH ALNGTKK+DSSI+YKTFLG M++ TRKIP
Sbjct: 270 AVVLWSKKRFQFTEQGDPVDFLSWFLNALHLALNGTKKRDSSIIYKTFLGHMRIYTRKIP 329
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P+ELEE R LL T EY ET TESPFLYLTCDLPPPPLFKD+ ENIIPQVNLYT+L K
Sbjct: 330 PLELEESQRSELLNTVEYGETVTESPFLYLTCDLPPPPLFKDQFTENIIPQVNLYTLLNK 389
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENF+KRFEIT LPPYLILY+KRFT+NTFFVEKNPTIVNFPVKNVDFG
Sbjct: 390 FNAVTEKEYKTYKENFMKRFEITELPPYLILYIKRFTRNTFFVEKNPTIVNFPVKNVDFG 449
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DILTPE VKAK+ T YDLVANIVHDGEP GTYRVH+ H+ G+WYE+
Sbjct: 450 DILTPE------------VKAKHPYTTYDLVANIVHDGEPGQGTYRVHILHRATGQWYEL 497
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPTAMSEG 337
QDLHVT ILPQMITLTEAYIQIYEL+ T M G
Sbjct: 498 QDLHVTQILPQMITLTEAYIQIYELK---KDTHMENG 531
>gi|350415794|ref|XP_003490754.1| PREDICTED: LOW QUALITY PROTEIN: U4/U6.U5 tri-snRNP-associated
protein 2-like [Bombus impatiens]
Length = 508
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 259/326 (79%), Positives = 282/326 (86%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HVTPLRD+FLRE NY+ VKRPPGDSS+LLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 179 ALSHVTPLRDFFLRESNYSHVKRPPGDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 238
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS+K+FQFTEQ DPIDFLSWFLN LH ALNGTKK+DSSIVYKTFLG M++ TRKIP
Sbjct: 239 AVVLWSKKRFQFTEQGDPIDFLSWFLNALHLALNGTKKRDSSIVYKTFLGHMRIYTRKIP 298
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P+EL+E R LL T EY ET TESPFLYLTCDLPPPPLFKD+ ENIIPQVNLYT+L K
Sbjct: 299 PLELDESQRSELLHTVEYGETVTESPFLYLTCDLPPPPLFKDQFTENIIPQVNLYTLLNK 358
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENF+KRFEIT LPPYLILY+KRFTKNTFFVEKNPTIVNFPVKNVDFG
Sbjct: 359 FNAVTEKEYKTYKENFMKRFEITELPPYLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFG 418
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DILTPE VK ++ T YDLVANIVHDGEP GTYRVH+ H+ G+WYE+
Sbjct: 419 DILTPE------------VKQRHPFTTYDLVANIVHDGEPGQGTYRVHILHRATGQWYEL 466
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDLHVT ILPQMITLTEAYIQIYEL+
Sbjct: 467 QDLHVTQILPQMITLTEAYIQIYELK 492
>gi|340713360|ref|XP_003395212.1| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like [Bombus
terrestris]
Length = 502
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 259/326 (79%), Positives = 282/326 (86%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HVTPLRD+FLRE NY+ VKRPPGDSS+LLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 179 ALSHVTPLRDFFLRESNYSHVKRPPGDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 238
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS+K+FQFTEQ DPIDFLSWFLN LH ALNGTKK+DSSIVYKTFLG M++ TRKIP
Sbjct: 239 AVVLWSKKRFQFTEQGDPIDFLSWFLNALHLALNGTKKRDSSIVYKTFLGHMRIYTRKIP 298
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P+EL+E R LL T EY ET TESPFLYLTCDLPPPPLFKD+ ENIIPQVNLYT+L K
Sbjct: 299 PLELDESQRSELLHTVEYGETVTESPFLYLTCDLPPPPLFKDQFTENIIPQVNLYTLLNK 358
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENF+KRFEIT LPPYLILY+KRFTKNTFFVEKNPTIVNFPVKNVDFG
Sbjct: 359 FNAVTEKEYKTYKENFMKRFEITELPPYLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFG 418
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DILTPE VK ++ T YDLVANIVHDGEP GTYRVH+ H+ G+WYE+
Sbjct: 419 DILTPE------------VKQRHPFTTYDLVANIVHDGEPGQGTYRVHILHRATGQWYEL 466
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDLHVT ILPQMITLTEAYIQIYEL+
Sbjct: 467 QDLHVTQILPQMITLTEAYIQIYELK 492
>gi|345489070|ref|XP_001603642.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Nasonia
vitripennis]
Length = 496
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 260/326 (79%), Positives = 283/326 (86%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HVTPLRDYFLRE NY++VKRPPGDSS+ LVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 172 ALSHVTPLRDYFLRESNYSKVKRPPGDSSYQLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 231
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS+K+FQFTEQ DP+DFLSWFLN LH ALNGTKKKDSSI+YKTFLG M++ TRKIP
Sbjct: 232 AVVLWSKKKFQFTEQGDPVDFLSWFLNALHIALNGTKKKDSSIIYKTFLGHMRIYTRKIP 291
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P+ELEE R LL T EY ET TESPFLYLTCDLPPPPLFKD+ ENIIPQVNLYT+L K
Sbjct: 292 PLELEESQRSELLNTVEYGETVTESPFLYLTCDLPPPPLFKDQHAENIIPQVNLYTLLNK 351
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN SEKEYKTYKENF+KRFEI LPP+LILY+KRFTKNTFFVEKNPTIVNFPVKNVDFG
Sbjct: 352 FNAVSEKEYKTYKENFMKRFEIRELPPFLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFG 411
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DILTPE VKA + T Y+LVANIVHDGEPS+GTYRVH+ HK G+WYE+
Sbjct: 412 DILTPE------------VKAMHPCTTYELVANIVHDGEPSHGTYRVHILHKATGQWYEL 459
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDLHVT ILPQMITLTEAYIQIYEL+
Sbjct: 460 QDLHVTQILPQMITLTEAYIQIYELK 485
>gi|380021530|ref|XP_003694616.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Apis florea]
Length = 508
Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust.
Identities = 260/326 (79%), Positives = 281/326 (86%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HVTPLRD+FLRE NY+ VKRPPGDSS+LLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 179 ALSHVTPLRDFFLRESNYSHVKRPPGDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 238
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS+K+FQFTEQ DPIDFLSWFLN LH ALNGTKK+DSSIVYKTFLG M++ TRKIP
Sbjct: 239 AVVLWSKKRFQFTEQGDPIDFLSWFLNALHLALNGTKKRDSSIVYKTFLGHMRIYTRKIP 298
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P+ELEE R LL T EY ET TESPFLYLTCDLPPPPLFKD+ ENIIPQVNLYT+L K
Sbjct: 299 PLELEESQRSELLHTVEYGETVTESPFLYLTCDLPPPPLFKDQFTENIIPQVNLYTLLNK 358
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENF+KRFEIT LPPYLILY+KRFTKNTFFVEKNPTIVNFPVKNVDFG
Sbjct: 359 FNAITEKEYKTYKENFMKRFEITELPPYLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFG 418
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DILT E VK K+ T YDLVANIVHDGEP GTYRVH+ H+ G+WYE+
Sbjct: 419 DILTSE------------VKQKHPYTTYDLVANIVHDGEPGQGTYRVHILHRATGQWYEL 466
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDLHVT ILPQMITLTEAYIQIYEL+
Sbjct: 467 QDLHVTQILPQMITLTEAYIQIYELK 492
>gi|328782425|ref|XP_394503.4| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like [Apis
mellifera]
Length = 508
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 260/326 (79%), Positives = 281/326 (86%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HVTPLRD+FLRE NY+ VKRPPGDSS+LLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 179 ALSHVTPLRDFFLRESNYSHVKRPPGDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 238
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS+K+FQFTEQ DPIDFLSWFLN LH ALNGTKK+DSSIVYKTFLG M++ TRKIP
Sbjct: 239 AVVLWSKKRFQFTEQGDPIDFLSWFLNALHLALNGTKKRDSSIVYKTFLGHMRIYTRKIP 298
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P+ELEE R LL T EY ET TESPFLYLTCDLPPPPLFKD+ ENIIPQVNLYT+L K
Sbjct: 299 PLELEESQRSELLHTVEYGETVTESPFLYLTCDLPPPPLFKDQFTENIIPQVNLYTLLNK 358
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENF+KRFEIT LPPYLILY+KRFTKNTFFVEKNPTIVNFPVKNVDFG
Sbjct: 359 FNAITEKEYKTYKENFMKRFEITELPPYLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFG 418
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DILT E VK K+ T YDLVANIVHDGEP GTYRVH+ H+ G+WYE+
Sbjct: 419 DILTSE------------VKQKHPYTTYDLVANIVHDGEPGQGTYRVHILHRATGQWYEL 466
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDLHVT ILPQMITLTEAYIQIYEL+
Sbjct: 467 QDLHVTQILPQMITLTEAYIQIYELK 492
>gi|383862535|ref|XP_003706739.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Megachile
rotundata]
Length = 508
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 257/326 (78%), Positives = 282/326 (86%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HVTPLRD+FLRE NY+ VKRPPGDSS+LLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 179 ALSHVTPLRDFFLRESNYSHVKRPPGDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 238
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS+K+FQFTEQ DPIDFLSWF+N LH ALNGTKK+DS+IVYKTFLG M++ TRKIP
Sbjct: 239 AVVLWSKKRFQFTEQGDPIDFLSWFMNALHLALNGTKKRDSTIVYKTFLGHMRIYTRKIP 298
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P+EL+E R LL T EY ET TESPFLYLTCDLPPPPLFKD+ ENIIPQVNLYT+L K
Sbjct: 299 PLELDESQRSELLHTVEYGETVTESPFLYLTCDLPPPPLFKDQFTENIIPQVNLYTLLNK 358
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENF+KRFEIT LPPYLILY+KRFTKNTFFVEKNPTIVNFPVKNVDFG
Sbjct: 359 FNAVTEKEYKTYKENFMKRFEITELPPYLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFG 418
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DILTPE VK ++ T YDLVANIVHDGEP GTYRVH+ H+ G+WYE+
Sbjct: 419 DILTPE------------VKQRHPYTTYDLVANIVHDGEPGQGTYRVHILHRATGQWYEM 466
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDLHVT ILPQMITLTEAYIQIYEL+
Sbjct: 467 QDLHVTQILPQMITLTEAYIQIYELK 492
>gi|345491244|ref|XP_001607982.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Nasonia
vitripennis]
Length = 416
Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust.
Identities = 258/326 (79%), Positives = 282/326 (86%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HVTPLRDYFLRE NY++VKRPPGDSS+ L+QRFGELMRKLWNPRNFK HVSPHEMLQ
Sbjct: 92 ALSHVTPLRDYFLRESNYSKVKRPPGDSSYQLIQRFGELMRKLWNPRNFKVHVSPHEMLQ 151
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS+K+FQFTEQ DP+DFLSWFLN LH ALNGTKKKDSSI+YKTFLG M++ TRKIP
Sbjct: 152 AVVLWSKKKFQFTEQGDPVDFLSWFLNALHLALNGTKKKDSSIIYKTFLGQMRIYTRKIP 211
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P+ELEE R LL T EY ET TESPFLYLTCDLPPPPLFKD+ ENIIPQVNLYT+L K
Sbjct: 212 PLELEESQRSELLNTVEYGETVTESPFLYLTCDLPPPPLFKDQHAENIIPQVNLYTLLNK 271
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN SEKEYKTYKENF+KRFEI LPP+LILY+KRFTKNTFFVEKNPTIVNFPVKNVDFG
Sbjct: 272 FNAISEKEYKTYKENFMKRFEIRELPPFLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFG 331
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DILTPE VKA + T Y+LVANIVHDGEPS+GTY+VH+ HK G+WYE+
Sbjct: 332 DILTPE------------VKAMHPHTNYELVANIVHDGEPSHGTYKVHILHKATGQWYEM 379
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDLHVT ILPQMITLTEAYIQIYEL+
Sbjct: 380 QDLHVTQILPQMITLTEAYIQIYELK 405
>gi|189235059|ref|XP_974413.2| PREDICTED: similar to ubiquitin specific protease 39 and snrnp
assembly factor [Tribolium castaneum]
gi|270003988|gb|EFA00436.1| hypothetical protein TcasGA2_TC003290 [Tribolium castaneum]
Length = 501
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 249/326 (76%), Positives = 283/326 (86%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL V PLR+YFLRE NY+++KRPPGDSS+LLVQR+GELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 185 ALSRVVPLRNYFLREENYSKIKRPPGDSSYLLVQRYGELMRKLWNPRNFKAHVSPHEMLQ 244
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS+K+FQ T Q DPIDFLSWFLN LHRALNG KKK+SSI+Y++FLG+MK+ TRKIP
Sbjct: 245 AVVLWSKKRFQITAQGDPIDFLSWFLNALHRALNGNKKKNSSIIYQSFLGNMKIYTRKIP 304
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P EL+++ ++ LL T EY+E TESPFLYLTCDLPPPPLF DE ENIIPQVNLY +LTK
Sbjct: 305 PTELDDRQKRMLLSTPEYQEIITESPFLYLTCDLPPPPLFIDEFRENIIPQVNLYQLLTK 364
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN ++EKEYKTYKENFLK+FEIT LPPYLILY+KRFTKNTF+VEKNPTIVNFPV+NVDFG
Sbjct: 365 FNGQTEKEYKTYKENFLKKFEITRLPPYLILYIKRFTKNTFYVEKNPTIVNFPVRNVDFG 424
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ LTPE VKAK++ T+YDLVANIVHDGEP GTYRVH+ K GKWYE+
Sbjct: 425 EFLTPE------------VKAKHKHTVYDLVANIVHDGEPGKGTYRVHILQKSTGKWYEM 472
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDLHVTDILPQMITLTEAYIQIYELR
Sbjct: 473 QDLHVTDILPQMITLTEAYIQIYELR 498
>gi|357619622|gb|EHJ72117.1| putative ubiquitin specific protease 39 and snrnp assembly factor
[Danaus plexippus]
Length = 485
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 238/326 (73%), Positives = 269/326 (82%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L V PLR+YFLRE NYA VKRPPGDSSFLLVQRFGEL+RKLWNPR FK+HVSPHEMLQ
Sbjct: 170 CLAQVRPLRNYFLREENYADVKRPPGDSSFLLVQRFGELLRKLWNPRAFKAHVSPHEMLQ 229
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS+K+FQF +QSDPIDFLSWFLN+LH ALNGTKK +SSI+YK+FLG M++ TRK+P
Sbjct: 230 AVVLWSKKRFQFIKQSDPIDFLSWFLNSLHMALNGTKKPNSSIIYKSFLGHMRIYTRKLP 289
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P + +E L +EEY E TESPFLYLTCDLPP PLF DE ENIIPQVNLY +L+K
Sbjct: 290 PPDADEAANVDLN-SEEYNEMITESPFLYLTCDLPPTPLFTDEFRENIIPQVNLYQLLSK 348
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN ++ KEYKTYKENFLKRFEIT LPPYLILY+KRFTKNTFFVEKNPT+VNFPVKNVDFG
Sbjct: 349 FNGQASKEYKTYKENFLKRFEITQLPPYLILYIKRFTKNTFFVEKNPTVVNFPVKNVDFG 408
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DILTPE+KAK+ T+Y+LV NIVHDG P GTYR H+ H +WYE+
Sbjct: 409 DILTPEIKAKHNG-----------KTIYELVGNIVHDGTPEKGTYRAHVLHTPTQQWYEM 457
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDLHVT ILPQMITLTEAYIQ+YEL+
Sbjct: 458 QDLHVTSILPQMITLTEAYIQVYELK 483
>gi|195132721|ref|XP_002010791.1| GI21733 [Drosophila mojavensis]
gi|193907579|gb|EDW06446.1| GI21733 [Drosophila mojavensis]
Length = 492
Score = 492 bits (1267), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/324 (72%), Positives = 270/324 (83%), Gaps = 11/324 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV+PLRDYFLRE NYA +KRPPGDS F LVQRFGELMRK+WNPRNFK+HVSPHEMLQ
Sbjct: 175 ALSHVSPLRDYFLREQNYATIKRPPGDSMFTLVQRFGELMRKMWNPRNFKAHVSPHEMLQ 234
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS K+FQ TEQ DPIDFLSWFLNTLHRAL G K+ +SSI+YK FLG M + TRKIP
Sbjct: 235 AVVLWSNKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPNSSILYKIFLGEMNIYTRKIP 294
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
PVEL++ +Q+LL T+EYK+ + F+YLTCDLPPPPLF DE ENIIPQVNLY +L K
Sbjct: 295 PVELDDAAKQQLLATDEYKDQVEHTNFIYLTCDLPPPPLFTDEFRENIIPQVNLYQLLAK 354
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYK+NF+KRFEIT LP ++ILY+KRFTKNTFF+EKNPTIVNFP+KNVDFG
Sbjct: 355 FNGTAEKEYKTYKDNFMKRFEITRLPQFIILYIKRFTKNTFFLEKNPTIVNFPIKNVDFG 414
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DIL + + K DL + T Y+LVANIVHDG+P GTYRVH+ HK G+WYE+
Sbjct: 415 DILGMKQRDK------DL-----KETKYNLVANIVHDGDPKKGTYRVHILHKANGQWYEM 463
Query: 301 QDLHVTDILPQMITLTEAYIQIYE 324
QDLHVT+ILPQMITLTE+YIQIYE
Sbjct: 464 QDLHVTEILPQMITLTESYIQIYE 487
>gi|195392656|ref|XP_002054973.1| GJ19115 [Drosophila virilis]
gi|194149483|gb|EDW65174.1| GJ19115 [Drosophila virilis]
Length = 493
Score = 492 bits (1267), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/329 (71%), Positives = 268/329 (81%), Gaps = 11/329 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRDYFLRE NYA +KRPPGDS F LVQRFGELMRK+WNPRNFK+HVSPHEMLQ
Sbjct: 176 ALSHVGPLRDYFLREQNYATIKRPPGDSMFTLVQRFGELMRKMWNPRNFKAHVSPHEMLQ 235
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS K+FQ TEQ DPIDFLSWFLNTLHRAL G K+ +SSI+YK FLG MK+ TRKIP
Sbjct: 236 AVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPNSSILYKIFLGEMKIYTRKIP 295
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
PVEL++ +Q+LL T+EYK + F+YLTCDLPPPPLF DE ENIIPQVNLY +L K
Sbjct: 296 PVELDDSAKQQLLATDEYKHQVEHTNFIYLTCDLPPPPLFTDEFRENIIPQVNLYQLLGK 355
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYK+NF+KRFEIT LP ++ILY+KRFTKNTFF+EKNPTIVNFP+KNVDFG
Sbjct: 356 FNGSAEKEYKTYKDNFMKRFEITRLPQFIILYIKRFTKNTFFLEKNPTIVNFPIKNVDFG 415
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DIL + + K + T Y+LVANIVHDG+P GTYRVH+ HK G+WYE+
Sbjct: 416 DILGMKQRDK-----------ALKETKYNLVANIVHDGDPKKGTYRVHILHKANGQWYEM 464
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTP 329
QDLHVT+ILPQMITLTE+YIQIYE P
Sbjct: 465 QDLHVTEILPQMITLTESYIQIYERSGEP 493
>gi|194769538|ref|XP_001966861.1| GF19056 [Drosophila ananassae]
gi|190618382|gb|EDV33906.1| GF19056 [Drosophila ananassae]
Length = 494
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 230/324 (70%), Positives = 267/324 (82%), Gaps = 11/324 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRDYFLRE NYA +KRPPGDS F LVQRFGELMRK+WNPRNFK+HVSPHEMLQ
Sbjct: 176 ALSHVGPLRDYFLREQNYAHIKRPPGDSMFTLVQRFGELMRKMWNPRNFKAHVSPHEMLQ 235
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS K+FQ TEQ DPIDFLSWFLNTLHRA+ G K+ +SSI+YK FLG M++ TRKIP
Sbjct: 236 AVVLWSSKRFQITEQGDPIDFLSWFLNTLHRAMKGNKQPNSSILYKIFLGEMQIYTRKIP 295
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
PVEL++ +Q+LL T+EYK+ ++ F+YLTCDLPPPPLF DE ENIIPQVNLY +L K
Sbjct: 296 PVELDDAAKQQLLATDEYKDQVEQTNFIYLTCDLPPPPLFTDEFRENIIPQVNLYQLLGK 355
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYK+NF+KRFEIT LP ++ILY+KRFTKNTFF+EKNPTIVNFP+KNVDFG
Sbjct: 356 FNGSAEKEYKTYKDNFMKRFEITRLPQFIILYIKRFTKNTFFLEKNPTIVNFPIKNVDFG 415
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DIL + K + T Y+LVANIVHDG+P GTYR H+ HK G+WYE+
Sbjct: 416 DILGMRQRDK-----------NVKDTKYNLVANIVHDGDPKKGTYRAHILHKANGQWYEM 464
Query: 301 QDLHVTDILPQMITLTEAYIQIYE 324
QDLHVT+ILPQMITLTE+YIQIYE
Sbjct: 465 QDLHVTEILPQMITLTESYIQIYE 488
>gi|195481512|ref|XP_002101675.1| GE17756 [Drosophila yakuba]
gi|194189199|gb|EDX02783.1| GE17756 [Drosophila yakuba]
Length = 494
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/324 (71%), Positives = 265/324 (81%), Gaps = 11/324 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRDYFLRE +YA VKRPPGDS F LVQRFGELMRK+WNPRNFKSHVSPHEMLQ
Sbjct: 176 ALSHVGPLRDYFLREQSYAHVKRPPGDSMFTLVQRFGELMRKMWNPRNFKSHVSPHEMLQ 235
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS K+FQ TEQ DPIDFLSWFLNTLHRAL G K+ +SSI+YK FLG MK+ TRKIP
Sbjct: 236 AVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPNSSILYKIFLGEMKIYTRKIP 295
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
PVEL++ + +LL TEEYK+ + F+YLTCDLPPPPLF DE ENIIPQVNLY +L K
Sbjct: 296 PVELDDAAKAQLLATEEYKDQVEHTNFIYLTCDLPPPPLFTDEFRENIIPQVNLYQLLGK 355
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYK+NF+KRFEIT LP ++ILY+KRFTKNTFF+EKNPTIVNFP+KNVDFG
Sbjct: 356 FNGSAEKEYKTYKDNFMKRFEITRLPQFIILYIKRFTKNTFFLEKNPTIVNFPIKNVDFG 415
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DIL + K + T Y+LVANIVHDG+P GTYR H+ HK G+WYE+
Sbjct: 416 DILGMRQRDK-----------DVKDTKYNLVANIVHDGDPKKGTYRAHILHKANGQWYEM 464
Query: 301 QDLHVTDILPQMITLTEAYIQIYE 324
QDLHVT+ILPQMITLTE+YIQIYE
Sbjct: 465 QDLHVTEILPQMITLTESYIQIYE 488
>gi|195059123|ref|XP_001995568.1| GH17820 [Drosophila grimshawi]
gi|193896354|gb|EDV95220.1| GH17820 [Drosophila grimshawi]
Length = 491
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 232/324 (71%), Positives = 270/324 (83%), Gaps = 11/324 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV+PLRDYFLRE +YA +KRPPGDS F LVQRFGELMRK+WNPRNFK+HVSPHEMLQ
Sbjct: 174 ALSHVSPLRDYFLREQSYATIKRPPGDSMFTLVQRFGELMRKMWNPRNFKAHVSPHEMLQ 233
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS K+FQ TEQ DPIDFLSWFLNTLHRAL G K+ +SSI+YK FLG MK+ TRKIP
Sbjct: 234 AVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPNSSILYKIFLGEMKIYTRKIP 293
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
PVEL++ +Q+LL T+EYK+ ++ F+YLTCDLPPPPLF DE ENIIPQVNLY +L K
Sbjct: 294 PVELDDTAKQQLLGTDEYKDQVEQTNFIYLTCDLPPPPLFTDEFRENIIPQVNLYQLLGK 353
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYK+NF+KRFEIT LP ++ILY+KRFTKNTFF+EKNPTIVNFP+KNVDFG
Sbjct: 354 FNGSAEKEYKTYKDNFMKRFEITRLPQFIILYIKRFTKNTFFLEKNPTIVNFPIKNVDFG 413
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DIL + + K + T Y+LVANIVHDG+P GTYRVH+ HK G+WYE+
Sbjct: 414 DILGMKQRDK-----------GIKDTKYNLVANIVHDGDPKKGTYRVHILHKANGQWYEM 462
Query: 301 QDLHVTDILPQMITLTEAYIQIYE 324
QDLHVT+ILPQMITLTE+YIQIYE
Sbjct: 463 QDLHVTEILPQMITLTESYIQIYE 486
>gi|194892734|ref|XP_001977718.1| GG19194 [Drosophila erecta]
gi|190649367|gb|EDV46645.1| GG19194 [Drosophila erecta]
Length = 494
Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/324 (71%), Positives = 265/324 (81%), Gaps = 11/324 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRDYFLRE +YA VKRPPGDS F LVQRFGELMRK+WNPRNFKSHVSPHEMLQ
Sbjct: 176 ALSHVGPLRDYFLREQSYAHVKRPPGDSMFTLVQRFGELMRKMWNPRNFKSHVSPHEMLQ 235
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS K+FQ TEQ DPIDFLSWFLNTLHRAL G K+ +SSI+YK FLG MK+ TRKIP
Sbjct: 236 AVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPNSSILYKIFLGEMKIYTRKIP 295
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
PVEL++ + +LL TEEYK+ + F+YLTCDLPPPPLF DE ENIIPQVNLY +L K
Sbjct: 296 PVELDDAAKAQLLATEEYKDQVEYTNFIYLTCDLPPPPLFTDEFRENIIPQVNLYQLLGK 355
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYK+NF+KRFEIT LP ++ILY+KRFTKNTFF+EKNPTIVNFP+KNVDFG
Sbjct: 356 FNGSAEKEYKTYKDNFMKRFEITRLPQFIILYIKRFTKNTFFLEKNPTIVNFPIKNVDFG 415
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DIL + K + T Y+LVANIVHDG+P GTYR H+ HK G+WYE+
Sbjct: 416 DILGMRQRDK-----------DVKDTKYNLVANIVHDGDPKKGTYRAHILHKANGQWYEM 464
Query: 301 QDLHVTDILPQMITLTEAYIQIYE 324
QDLHVT+ILPQMITLTE+YIQIYE
Sbjct: 465 QDLHVTEILPQMITLTESYIQIYE 488
>gi|198469718|ref|XP_002134392.1| GA23380 [Drosophila pseudoobscura pseudoobscura]
gi|198147002|gb|EDY73019.1| GA23380 [Drosophila pseudoobscura pseudoobscura]
Length = 494
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/330 (69%), Positives = 269/330 (81%), Gaps = 11/330 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRDYFLRE +YA++KRPPGDS F LVQRFGELMRK+WNPRNFK+HVSPHEMLQ
Sbjct: 176 ALSHVGPLRDYFLREQSYAKIKRPPGDSMFTLVQRFGELMRKMWNPRNFKAHVSPHEMLQ 235
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS K+FQ TEQ DPIDFLSWFLNTLHRAL G K+ +SSI+Y FLG M++ TRK+P
Sbjct: 236 AVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPNSSILYNIFLGEMQIFTRKMP 295
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
PVEL++ +++LL TEEY++ + F+YLTCDLPPPPLF DE ENIIPQVNLY +L K
Sbjct: 296 PVELDDAAKEKLLATEEYQDQVEHTNFIYLTCDLPPPPLFTDEFRENIIPQVNLYQLLGK 355
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYK+NF+KRFEIT LP ++ILY+KRFTKNTFF+EKNPTIVNFP+KNVDFG
Sbjct: 356 FNGSAEKEYKTYKDNFMKRFEITRLPQFIILYIKRFTKNTFFLEKNPTIVNFPIKNVDFG 415
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DIL + K + T Y+LVANIVHDG+P GTYR H+ HK G+WYE+
Sbjct: 416 DILGMRQRDK-----------DVKDTKYNLVANIVHDGDPKKGTYRAHILHKANGQWYEM 464
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPS 330
QDLHVT+ILPQMITLTE+YIQIYE + PS
Sbjct: 465 QDLHVTEILPQMITLTESYIQIYERSSDPS 494
>gi|195432803|ref|XP_002064406.1| GK20149 [Drosophila willistoni]
gi|194160491|gb|EDW75392.1| GK20149 [Drosophila willistoni]
Length = 489
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/329 (69%), Positives = 269/329 (81%), Gaps = 11/329 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRDYFLRE NYA +KRPPGDS F LVQRFGELMRK+WNPRNFKSHVSPHEMLQ
Sbjct: 172 ALSHVGPLRDYFLREHNYAHIKRPPGDSMFTLVQRFGELMRKMWNPRNFKSHVSPHEMLQ 231
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS K+FQ TEQ DPIDFLSWFLNTLHRA+ G K+ +SSI+YK FLG M++ +RKIP
Sbjct: 232 AVVLWSSKRFQITEQGDPIDFLSWFLNTLHRAMKGNKQPNSSILYKIFLGEMQIYSRKIP 291
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
PVEL++ +Q+LL T+EY++ ++ F+YLTCDLPPPPLF DE ENIIPQVNLY +L K
Sbjct: 292 PVELDDTAKQQLLATDEYQDKVEQTNFIYLTCDLPPPPLFTDEFRENIIPQVNLYQLLGK 351
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYK+NF+KRFEIT LP ++ILY+KRFTKNTFF+EKNPTIVNFP+KNVDFG
Sbjct: 352 FNGSAEKEYKTYKDNFMKRFEITRLPQFIILYIKRFTKNTFFLEKNPTIVNFPIKNVDFG 411
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DIL + K ++T Y+LVANIVHDG+P GTYR H+ HK G+WYE+
Sbjct: 412 DILGMRQRDK-----------NVKNTKYNLVANIVHDGDPKKGTYRAHILHKANGQWYEM 460
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTP 329
QDLHVT+ILPQMITLTE+YIQIYE P
Sbjct: 461 QDLHVTEILPQMITLTESYIQIYERSDEP 489
>gi|195345567|ref|XP_002039340.1| GM22925 [Drosophila sechellia]
gi|194134566|gb|EDW56082.1| GM22925 [Drosophila sechellia]
Length = 494
Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/324 (70%), Positives = 264/324 (81%), Gaps = 11/324 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRDYFL++ +YA V RPPGDS F LVQRFGELMRK+WNPRNFKSHVSPHEMLQ
Sbjct: 176 ALSHVGPLRDYFLQKQSYAHVMRPPGDSVFTLVQRFGELMRKMWNPRNFKSHVSPHEMLQ 235
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS K+FQ TEQ DPIDFLSWFLNTLHRAL G K+ +SSI+YK FLG MK+ TRKIP
Sbjct: 236 AVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPNSSILYKIFLGEMKIYTRKIP 295
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
PVEL++ + +LL TEEYK+ + F+YLTCDLPPPPLF DE ENIIPQVNLY +L+K
Sbjct: 296 PVELDDATKAKLLATEEYKDQVEDKNFIYLTCDLPPPPLFTDEFRENIIPQVNLYQLLSK 355
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYK NF+KRFEIT LP ++ILY+KRFTKNTFF+EKNPTIVNFP+K+VDFG
Sbjct: 356 FNGSAEKEYKTYKANFMKRFEITRLPQFIILYIKRFTKNTFFLEKNPTIVNFPIKHVDFG 415
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DIL + K + T Y+LVANIVHDG+P GTYR H+ HK G+WYE+
Sbjct: 416 DILGMRQRDK-----------DVKDTKYNLVANIVHDGDPKKGTYRAHILHKANGQWYEM 464
Query: 301 QDLHVTDILPQMITLTEAYIQIYE 324
QDLHVT+ILPQMITLTE+YIQIYE
Sbjct: 465 QDLHVTEILPQMITLTESYIQIYE 488
>gi|18859907|ref|NP_573334.1| CG7288 [Drosophila melanogaster]
gi|16769542|gb|AAL28990.1| LD38070p [Drosophila melanogaster]
gi|22832531|gb|AAF48897.2| CG7288 [Drosophila melanogaster]
gi|220946848|gb|ACL85967.1| CG7288-PA [synthetic construct]
Length = 494
Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/324 (70%), Positives = 263/324 (81%), Gaps = 11/324 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRDYFL++ +YA V RPPGDS F LVQRFGELMRK+WNPRNFKSHVSPHEMLQ
Sbjct: 176 ALSHVGPLRDYFLQKQSYAHVVRPPGDSVFTLVQRFGELMRKMWNPRNFKSHVSPHEMLQ 235
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS K+FQ TEQ DPIDFLSWFLNTLHRAL G K +SSI+YK FLG MK+ TRK+P
Sbjct: 236 AVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKHPNSSILYKIFLGEMKIYTRKMP 295
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
PVEL++ + +LL TEEYK+ + F+YLTCDLPPPPLF DE ENIIPQVNLY +L+K
Sbjct: 296 PVELDDAAKAQLLATEEYKDQVEDKNFIYLTCDLPPPPLFTDEFRENIIPQVNLYQLLSK 355
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYK NF+KRFEIT LP ++ILY+KRFTKNTFF+EKNPTIVNFP+K+VDFG
Sbjct: 356 FNGTAEKEYKTYKANFMKRFEITRLPQFIILYIKRFTKNTFFLEKNPTIVNFPIKHVDFG 415
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DIL + K + T Y+LVANIVHDG+P GTYR H+ HK G+WYE+
Sbjct: 416 DILGMRQRDK-----------DVKDTKYNLVANIVHDGDPKKGTYRAHILHKANGQWYEM 464
Query: 301 QDLHVTDILPQMITLTEAYIQIYE 324
QDLHVT+ILPQMITLTE+YIQIYE
Sbjct: 465 QDLHVTEILPQMITLTESYIQIYE 488
>gi|321473066|gb|EFX84034.1| hypothetical protein DAPPUDRAFT_187802 [Daphnia pulex]
Length = 495
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 223/335 (66%), Positives = 270/335 (80%), Gaps = 12/335 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRDYFLRE NY +KRPPGD++ +LVQRFGEL+RKLWNPRNFK+HVSPHEMLQ
Sbjct: 172 ALSHVVPLRDYFLREENYIGIKRPPGDNNVILVQRFGELIRKLWNPRNFKAHVSPHEMLQ 231
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K+FQ T Q DP++FLSWFLN LH ALNGTKK SSI+YK+FLG+MK+ +++IP
Sbjct: 232 AVVLCSKKKFQITSQGDPVEFLSWFLNALHLALNGTKKPTSSIIYKSFLGAMKIHSQRIP 291
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P++ + + L+LT EY ET +SPFL+L DLPPPPLFKDE ENIIPQV+L+ +L++
Sbjct: 292 PIDATDTEKDALMLTAEYVETFVDSPFLFLAADLPPPPLFKDEFRENIIPQVSLFALLSQ 351
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +KEYKTYKENFLKRFE+T LP Y+IL +KRFTKNTFF+EKNPTI+NFP++ VDFG
Sbjct: 352 FNGVQQKEYKTYKENFLKRFELTKLPRYIILNIKRFTKNTFFIEKNPTIINFPIRGVDFG 411
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DIL + V+AK+ T YDL+ANIVHDGEP+ GTYRVH+ HK GKW+E+
Sbjct: 412 DILGAD------------VRAKHGCTTYDLLANIVHDGEPTKGTYRVHILHKATGKWFEM 459
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPTAMS 335
QDLHVT+ILPQMITLTEAYIQI+E T S MS
Sbjct: 460 QDLHVTEILPQMITLTEAYIQIWEQSTERSDVEMS 494
>gi|158296728|ref|XP_317070.4| AGAP008381-PA [Anopheles gambiae str. PEST]
gi|157014851|gb|EAA12281.4| AGAP008381-PA [Anopheles gambiae str. PEST]
Length = 501
Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust.
Identities = 225/328 (68%), Positives = 267/328 (81%), Gaps = 12/328 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV P+RD+FL E NYA +KRPPGD++F LVQRFGEL+RKLWNPRNFK+HVSPHEMLQ
Sbjct: 183 ALSHVKPIRDFFLMEKNYANIKRPPGDTAFTLVQRFGELLRKLWNPRNFKAHVSPHEMLQ 242
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS KQFQ T+Q DPI+FLSWFL++LH+ L G K+ DSS++ ++FLG MK+ TRK+P
Sbjct: 243 AVVLWSSKQFQITKQGDPIEFLSWFLHSLHKQLRGNKQPDSSVINRSFLGEMKIYTRKLP 302
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P EL++ +Q LL T+EY+E S FLYLTCDLP PLF DE+ ENIIPQVNLY +L K
Sbjct: 303 PTELDDVQKQLLLATDEYQEKVETSTFLYLTCDLPATPLFIDELRENIIPQVNLYQLLAK 362
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN+ SEKEYKTYK+NFLKRFEIT LP Y+ILY+KRFTKNTFF+EKNPTIVNFPVKNVDFG
Sbjct: 363 FNSISEKEYKTYKDNFLKRFEITRLPKYVILYIKRFTKNTFFLEKNPTIVNFPVKNVDFG 422
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DILT + K + T Y+LVANIVHDGEP++GTYR H+ K +WYE+
Sbjct: 423 DILTED------------NKKTHRYTKYNLVANIVHDGEPNSGTYRCHILQKSTNQWYEM 470
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTT 328
QDLHVT+ILPQMITLTEAYIQIYEL+ +
Sbjct: 471 QDLHVTNILPQMITLTEAYIQIYELQES 498
>gi|157124289|ref|XP_001660405.1| ubiquitin specific protease 39 and snrnp assembly factor [Aedes
aegypti]
gi|108882840|gb|EAT47065.1| AAEL001827-PA [Aedes aegypti]
Length = 520
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/326 (69%), Positives = 264/326 (80%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L HV P+RD+FL E NYA +KRPPGD++F LVQRFGEL+RKLWNPRNFK HVSPHEMLQ
Sbjct: 196 SLSHVKPIRDFFLIEKNYANIKRPPGDTAFTLVQRFGELLRKLWNPRNFKPHVSPHEMLQ 255
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS K+FQ TEQ DPI+FLSWFL+ LH+ L G K+ +SS+VY+TFLG MK+ TRK+P
Sbjct: 256 AVVLWSSKKFQITEQGDPIEFLSWFLHILHKQLRGNKQPNSSVVYRTFLGEMKIYTRKLP 315
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P EL++ +Q LL T+EY+E S FLYLTCDLP PLF DE ENIIPQVNLY +L K
Sbjct: 316 PTELDDVQKQLLLATDEYQEKVETSTFLYLTCDLPATPLFIDEFRENIIPQVNLYQLLAK 375
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN+ SEKEYKTYKENFLKRFEIT LP ++ILY+KRFTKNTFF+EKNPTIVNFPVKN+DFG
Sbjct: 376 FNSVSEKEYKTYKENFLKRFEITRLPKFIILYIKRFTKNTFFLEKNPTIVNFPVKNIDFG 435
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DILT E K +++ T Y+LVANIVHDGEP+ GTYR H+ K +WYE+
Sbjct: 436 DILTEE------------NKKQHQYTKYNLVANIVHDGEPNAGTYRCHILQKSTNQWYEM 483
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDLHVT ILPQMITLTEAYIQIYEL+
Sbjct: 484 QDLHVTSILPQMITLTEAYIQIYELQ 509
>gi|312380834|gb|EFR26723.1| hypothetical protein AND_06979 [Anopheles darlingi]
Length = 593
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/328 (68%), Positives = 266/328 (81%), Gaps = 12/328 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV P+RD+FL E NYA +KRPPGD++F LVQRFGEL+RKLWNPRNFK+HVSPHEMLQ
Sbjct: 275 ALSHVKPIRDFFLMEKNYANIKRPPGDTAFTLVQRFGELLRKLWNPRNFKAHVSPHEMLQ 334
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS KQFQ T+Q DPI+FLSWFL++LH+ L G ++ +SS+V ++FLG MK+ TRK+P
Sbjct: 335 AVVLWSNKQFQITKQGDPIEFLSWFLHSLHKQLRGNRQPNSSVVNRSFLGEMKIYTRKLP 394
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P EL++ +Q LL T+EY+E E S FLYLTCDLP PLF DE+ ENIIPQVNLY +L K
Sbjct: 395 PTELDDVQKQLLLATDEYQEKEETSTFLYLTCDLPATPLFIDELRENIIPQVNLYQLLAK 454
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN+ SEKEYKTYKENFLKRFEIT LP Y+ILY+KRFTKNTFF+EKNPTIVNFPVKNVD G
Sbjct: 455 FNSISEKEYKTYKENFLKRFEITRLPKYVILYIKRFTKNTFFLEKNPTIVNFPVKNVDLG 514
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DILT E K + T Y+LVANIVHDGEP++GTYR H+ K +WYE+
Sbjct: 515 DILTEE------------NKKTHPFTKYNLVANIVHDGEPNSGTYRCHILQKSTNQWYEM 562
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTT 328
QDLHVT+ILPQMITLTEAYIQIYE + T
Sbjct: 563 QDLHVTNILPQMITLTEAYIQIYEQQET 590
>gi|170031567|ref|XP_001843656.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870484|gb|EDS33867.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 535
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/323 (69%), Positives = 258/323 (79%), Gaps = 12/323 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L HV P+RD+FL E NYA KRPPGD++F LVQRFGEL+RKLWNPRNFK+HVSPHEMLQ
Sbjct: 200 SLSHVKPIRDFFLIEKNYANTKRPPGDTAFTLVQRFGELLRKLWNPRNFKAHVSPHEMLQ 259
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS K+FQ TEQ DPI+FLSWFL++LH+ L G K+ +SS+V +TFLG MK+ TRK+P
Sbjct: 260 AVVLWSSKKFQITEQGDPIEFLSWFLHSLHKQLRGNKQPNSSVVNRTFLGEMKIYTRKLP 319
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P EL++ +Q LL T+EY+E S FLYLTCDLP PLF DE ENIIPQVNLY +L K
Sbjct: 320 PTELDDVQKQLLLATDEYQEKSETSTFLYLTCDLPATPLFIDEFRENIIPQVNLYQLLAK 379
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN SEKEYKTYKENFLKRFEIT LP ++ILY+KRFTKNTFF+EKNPTIVNFPVKN+DFG
Sbjct: 380 FNAVSEKEYKTYKENFLKRFEITRLPKFVILYIKRFTKNTFFLEKNPTIVNFPVKNIDFG 439
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DILT E K + T Y+LVANIVHDGEP +GTYR H+ K +WYE+
Sbjct: 440 DILTEE------------NKRAHRFTKYNLVANIVHDGEPKSGTYRCHVLQKSTNQWYEM 487
Query: 301 QDLHVTDILPQMITLTEAYIQIY 323
QDLHVT ILPQMITLTEAYIQIY
Sbjct: 488 QDLHVTSILPQMITLTEAYIQIY 510
>gi|427783021|gb|JAA56962.1| Putative spindle pole body protein [Rhipicephalus pulchellus]
Length = 496
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/337 (66%), Positives = 266/337 (78%), Gaps = 17/337 (5%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+YFLRE NY +KRPPGD +FL+VQRFGEL+RKLWNPRNFK+HVSPHEMLQ
Sbjct: 170 ALSHVPPLRNYFLREENYTTLKRPPGDINFLIVQRFGELIRKLWNPRNFKAHVSPHEMLQ 229
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K+FQ T+Q DPIDFLSWFLN+LH ALNGT+K SSIVY+TF G M V +RK+
Sbjct: 230 AVVLCSKKRFQITQQGDPIDFLSWFLNSLHMALNGTQKISSSIVYRTFRGGMNVYSRKVI 289
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
PVE+ E R+ L T EY E + F+YLT DLP PLFKDE+ ENIIPQV L+TIL+K
Sbjct: 290 PVEMTEAERRAALRTTEYDEKVESTGFMYLTADLPAQPLFKDELRENIIPQVPLFTILSK 349
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN SEKEY+TYK++ LKRFE+TSLPPYLILY+KRFTKNTFFVEKNPTIVNFP+K+VD G
Sbjct: 350 FNGTSEKEYRTYKDSTLKRFELTSLPPYLILYIKRFTKNTFFVEKNPTIVNFPIKDVDLG 409
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSN--GTYRVHLYHKGIGKWY 298
+++ V E T +YDL+AN+VH+GEP + GTYR H+ H+G GKWY
Sbjct: 410 ELIAANVPDAAEGTY-----------VYDLIANVVHEGEPGSGKGTYRAHILHRGSGKWY 458
Query: 299 EIQDLHVTDILPQMITLTEAYIQIYELR----TTPSP 331
E+QDLHVT+ILPQMITL+EAYIQI+E R T P+P
Sbjct: 459 ELQDLHVTEILPQMITLSEAYIQIWERRRKKPTVPTP 495
>gi|346465657|gb|AEO32673.1| hypothetical protein [Amblyomma maculatum]
Length = 490
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/335 (66%), Positives = 265/335 (79%), Gaps = 14/335 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+YFLRE NYA +KRPPGD + L+VQRFGEL+RKLWNPRNFK+HVSPHEMLQ
Sbjct: 157 ALSHVPPLRNYFLREENYASLKRPPGDINSLIVQRFGELIRKLWNPRNFKAHVSPHEMLQ 216
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K+FQ T+Q DPIDFLSWFLN+LH ALNGT+ +SSIVY+TF G M V +RK+
Sbjct: 217 AVVLCSKKRFQITQQGDPIDFLSWFLNSLHMALNGTQSINSSIVYRTFRGGMNVYSRKVI 276
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
PVE+ E R+ L T EY E + F+YLT DLP PLFKDE+ ENIIPQV L+TIL+K
Sbjct: 277 PVEMTEAERRAALRTTEYDEKVERTGFMYLTADLPAQPLFKDELRENIIPQVPLFTILSK 336
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN SEKEY+TYK++ LKRFE+TSLPPYLILY+KRFTKNTFFVEKNPTIVNFP+K+VD G
Sbjct: 337 FNGTSEKEYRTYKDSTLKRFELTSLPPYLILYIKRFTKNTFFVEKNPTIVNFPIKDVDLG 396
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSN--GTYRVHLYHKGIGKWY 298
+++ V E T +YDL+AN+VH+GEP + GTYR H+ H+G GKWY
Sbjct: 397 ELIAANVPDAIEGTY-----------VYDLIANVVHEGEPGSGKGTYRAHILHRGSGKWY 445
Query: 299 EIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTA 333
E+QDLHVT+ILPQMITL+EAYIQI+E R PTA
Sbjct: 446 ELQDLHVTEILPQMITLSEAYIQIWE-RRRKKPTA 479
>gi|195555380|ref|XP_002077094.1| GD24862 [Drosophila simulans]
gi|194203112|gb|EDX16688.1| GD24862 [Drosophila simulans]
Length = 484
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/324 (67%), Positives = 254/324 (78%), Gaps = 21/324 (6%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRDYFL++ +YA V RPPGDS F L +WNPRNFKSHVSPHEMLQ
Sbjct: 176 ALSHVGPLRDYFLQKQSYAHVMRPPGDSVFTL----------MWNPRNFKSHVSPHEMLQ 225
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVLWS K+FQ TEQ DPIDFLSWFLNTLHRAL G K+ +SSI+YK FLG MK+ TRKIP
Sbjct: 226 AVVLWSSKRFQITEQGDPIDFLSWFLNTLHRALKGNKQPNSSILYKIFLGEMKIYTRKIP 285
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
PVEL++ + +LL TEEYK+ + F+YLTCDLPPPPLF DE ENIIPQVNLY +L+K
Sbjct: 286 PVELDDAAKAKLLATEEYKDQVEDKNFIYLTCDLPPPPLFTDEFRENIIPQVNLYQLLSK 345
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYK NF+KRFEIT LP ++ILY+KRFTKNTFF+EKNPTIVNFP+K+VDFG
Sbjct: 346 FNGSAEKEYKTYKANFMKRFEITRLPQFIILYIKRFTKNTFFLEKNPTIVNFPIKHVDFG 405
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DIL + K + T Y+LVANIVHDG+P GTYR H+ HK G+WYE+
Sbjct: 406 DILGMRQRDK-----------DVKDTKYNLVANIVHDGDPKKGTYRAHILHKANGQWYEM 454
Query: 301 QDLHVTDILPQMITLTEAYIQIYE 324
QDLHVT+ILPQMITLTE+YIQIYE
Sbjct: 455 QDLHVTEILPQMITLTESYIQIYE 478
>gi|241117268|ref|XP_002401865.1| ubiquitin specific peptidase, putative [Ixodes scapularis]
gi|215493221|gb|EEC02862.1| ubiquitin specific peptidase, putative [Ixodes scapularis]
Length = 505
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/325 (67%), Positives = 262/325 (80%), Gaps = 16/325 (4%)
Query: 4 HVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVV 63
HV PLR+YFLRE NYA +KRPPGD + L+VQRFGEL+RKLWNPRNFK+HVSPHEMLQAVV
Sbjct: 185 HVPPLRNYFLREENYAALKRPPGDITSLIVQRFGELIRKLWNPRNFKAHVSPHEMLQAVV 244
Query: 64 LWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVE 123
L S+K+FQ TEQ DPIDFLSWFLN+LH ALNGT+K+ SSIVYKTF G M + +RK+ PVE
Sbjct: 245 LCSKKRFQITEQGDPIDFLSWFLNSLHLALNGTQKRSSSIVYKTFRGGMNIYSRKVVPVE 304
Query: 124 LEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNN 183
E R+ L T EY+E + F+YLT DLP PLFKDE+ ENIIPQV L+TIL+KFN
Sbjct: 305 HTEAERRAALRTAEYQEKVENTGFMYLTADLPAQPLFKDELRENIIPQVPLFTILSKFNG 364
Query: 184 ESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDIL 243
SEKEY+TYK++ LKRF++TSLPPYLILY+KRFTKNTFFVEKNPTIVNFP+K+VD G+++
Sbjct: 365 TSEKEYRTYKDSTLKRFQLTSLPPYLILYIKRFTKNTFFVEKNPTIVNFPIKDVDLGELV 424
Query: 244 TPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSN--GTYRVHLYHKGIGKWYEIQ 301
A E ++ +YDL+AN+VH+GEP + GTYR HL H+G GKWYE+Q
Sbjct: 425 -----AGAEGD---------DTYVYDLIANVVHEGEPGSGKGTYRAHLLHRGSGKWYEMQ 470
Query: 302 DLHVTDILPQMITLTEAYIQIYELR 326
DLHVT+ILPQMITL+EAYIQI+E R
Sbjct: 471 DLHVTEILPQMITLSEAYIQIWERR 495
>gi|26328829|dbj|BAC28153.1| unnamed protein product [Mus musculus]
Length = 564
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 241 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 300
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 301 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALVGTKKKKKTIVNDVFQGSMRIFTKKLP 360
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 361 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 420
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 421 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 480
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 481 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 528
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 529 QDLQVTDILPQMITLSEAYIQIWKRR 554
>gi|443719395|gb|ELU09579.1| hypothetical protein CAPTEDRAFT_165273 [Capitella teleta]
Length = 358
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/328 (65%), Positives = 263/328 (80%), Gaps = 14/328 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+YFL+E NY +KRPPGD FLL +RFGEL+RKLWNPRNFK+HVSPHEMLQ
Sbjct: 32 ALSHVAPLRNYFLQEENYNTIKRPPGDQMFLLARRFGELLRKLWNPRNFKAHVSPHEMLQ 91
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D ++FLSWFLN+LH+ L G KK +SSIV KTF GSM+V +RKIP
Sbjct: 92 AVVLCSKKHFQITKQGDSVEFLSWFLNSLHQCLGGNKKVNSSIVSKTFRGSMRVYSRKIP 151
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+EL E + +LL TEEY+ET E+PFLYLTCDLPPPPL+ D + ENIIPQ+ +Y +L K
Sbjct: 152 ALELREDEKLKLLETEEYQETCAETPFLYLTCDLPPPPLYPDGLQENIIPQIPIYNVLNK 211
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN SEKEYKT+K++ ++RF IT LPP++ILY KRFTKNTF +EKNPTIVNFPVK +DFG
Sbjct: 212 FNGISEKEYKTHKDSTMRRFVITRLPPFIILYFKRFTKNTFILEKNPTIVNFPVKGIDFG 271
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGT--YRVHLYHKGIGKWY 298
++L P+ +AK++ST YDLVANIVH+G+P GT Y+ HL HKG GKWY
Sbjct: 272 ELLDPK------------DRAKHKSTTYDLVANIVHEGKPGGGTGSYKCHLLHKGSGKWY 319
Query: 299 EIQDLHVTDILPQMITLTEAYIQIYELR 326
E+QDLHV DILPQMITLTE+Y+QIY++R
Sbjct: 320 ELQDLHVVDILPQMITLTESYVQIYQVR 347
>gi|390335093|ref|XP_001185686.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2
[Strongylocentrotus purpuratus]
Length = 517
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/330 (62%), Positives = 259/330 (78%), Gaps = 16/330 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL V P+R+YFLRE NY +K PPG+ +L QRFGELMRK+WN RNFK+HVSPHEMLQ
Sbjct: 182 ALSGVVPMRNYFLREENYGDIKLPPGNIMSILSQRFGELMRKMWNQRNFKAHVSPHEMLQ 241
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
A+VL S+K+FQ TEQ DP+D LSWF+N LH +L GTKK +SSIVYKTF G MK+ T+K+
Sbjct: 242 AIVLCSKKRFQITEQGDPVDVLSWFINALHSSLAGTKKHNSSIVYKTFQGRMKIFTKKVL 301
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P ++ ++ + +LL TEEYKETE + PFL+L+ D+PP PLFKDE+ +NIIPQV L ++L K
Sbjct: 302 PADVSDEEKAKLLKTEEYKETEQDQPFLFLSLDIPPAPLFKDELEQNIIPQVPLSSLLAK 361
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
F+ ++EKEYKTYKE+F+KR+++T LPPYLIL +KRFTKNTFFVEKNPTIVNFPVKN+D
Sbjct: 362 FDGQTEKEYKTYKESFVKRYQLTQLPPYLILCMKRFTKNTFFVEKNPTIVNFPVKNIDLA 421
Query: 241 DIL--TPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP--SNGTYRVHLYHKGIGK 296
++L PEV A + KY T YDLVANIVH G+P G ++ H+ H+ GK
Sbjct: 422 EMLLDDPEVLAAH----------KY--TTYDLVANIVHQGQPGRGKGAFKAHVIHRPTGK 469
Query: 297 WYEIQDLHVTDILPQMITLTEAYIQIYELR 326
W+EIQDLHV DILPQ+ITL+EAYIQI+ELR
Sbjct: 470 WFEIQDLHVADILPQLITLSEAYIQIWELR 499
>gi|339239199|ref|XP_003381154.1| u4/U6.U5 tri-snRNP-associated protein 2 [Trichinella spiralis]
gi|316975834|gb|EFV59230.1| u4/U6.U5 tri-snRNP-associated protein 2 [Trichinella spiralis]
Length = 538
Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/327 (62%), Positives = 248/327 (75%), Gaps = 14/327 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRDYFL E NY VKRPPGD LL QRFGEL+RK+WNPRNFK+HVSPHEMLQ
Sbjct: 207 ALAHVPPLRDYFLCEDNYKNVKRPPGDKMVLLYQRFGELIRKMWNPRNFKAHVSPHEMLQ 266
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S K+FQ TEQ D ID LSW LN LH +LNGT + DSSI+Y+TF G M+ R++
Sbjct: 267 AVVLCSNKRFQITEQGDAIDVLSWLLNALHVSLNGTNRTDSSIIYRTFRGKMRTFKRQVL 326
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
PV+ E+ R RLLLTEEY+E PFL+LT DLPP PL++DE +NIIPQV L +L K
Sbjct: 327 PVDANEEERTRLLLTEEYQERVQNLPFLFLTLDLPPAPLYRDEFFQNIIPQVPLAALLAK 386
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTY EN +KRFEIT LPPYLI++VKRFTKN F+VEKNPTIVNFP++NVD
Sbjct: 387 FNGITEKEYKTYNENIMKRFEITHLPPYLIMFVKRFTKNHFYVEKNPTIVNFPIRNVDLY 446
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG--EPSNGTYRVHLYHKGIGKWY 298
D L+ + K ++ T YD++ANIVHDG +P G+YR+ L HKG GKW+
Sbjct: 447 DYLSED------------GKKRHPYTTYDMIANIVHDGKPDPGEGSYRIQLVHKGTGKWF 494
Query: 299 EIQDLHVTDILPQMITLTEAYIQIYEL 325
E++DLHV +ILPQMITLTE+YIQ++E+
Sbjct: 495 ELEDLHVKEILPQMITLTESYIQVWEM 521
>gi|121583691|ref|NP_001073539.1| U4/U6.U5 tri-snRNP-associated protein 2 [Danio rerio]
gi|118763915|gb|AAI28869.1| Ubiquitin specific peptidase 39 [Danio rerio]
Length = 497
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/324 (64%), Positives = 250/324 (77%), Gaps = 13/324 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY ++RPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 173 ALSNVPPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 232
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK SSI+ K F GSM++ ++K+P
Sbjct: 233 AVVLCSKKTFQITKQGDAVDFLSWFLNALHGALGGTKKK-SSIITKAFQGSMRIFSKKLP 291
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + ++ LLL EEY+E +ES FLYLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 292 HPDLPPEEKEALLLKEEYQEEMSESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFNILGK 351
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 352 FNGNTEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 411
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ LT E + ++T YDLVAN+VHDG+P+ G+YR+H+ H G GKWYE+
Sbjct: 412 EYLTEE------------AQVTEKNTTYDLVANVVHDGKPTEGSYRIHVLHHGTGKWYEL 459
Query: 301 QDLHVTDILPQMITLTEAYIQIYE 324
QDL V DILPQMITL+EAYIQI++
Sbjct: 460 QDLQVIDILPQMITLSEAYIQIWK 483
>gi|197097880|ref|NP_001126415.1| U4/U6.U5 tri-snRNP-associated protein 2 [Pongo abelii]
gi|75054842|sp|Q5R761.1|SNUT2_PONAB RecName: Full=U4/U6.U5 tri-snRNP-associated protein 2; AltName:
Full=Inactive ubiquitin-specific peptidase 39
gi|55731370|emb|CAH92399.1| hypothetical protein [Pongo abelii]
Length = 565
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 481
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +E+T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 482 EYLSEE------------VQAVHENTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 529
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 530 QDLQVTDILPQMITLSEAYIQIWKRR 555
>gi|410923080|ref|XP_003975010.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Takifugu
rubripes]
Length = 500
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/324 (62%), Positives = 249/324 (76%), Gaps = 13/324 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
A C+V PLR++FL E NY ++RPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 177 AFCNVPPLRNFFLEEENYKGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 236
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DF++WFLN LH AL GTKKK SI+ K F GSM++ T+K+P
Sbjct: 237 AVVLCSKKNFQITKQGDAVDFMTWFLNALHGALGGTKKK-PSILTKVFQGSMRIFTKKLP 295
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + ++ LL+TEEY+E +ES FL+LT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 296 HPDLMPEEKEALLVTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 355
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYL+ +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 356 FNGNTEKEYKTYKENFLKRFQLTKLPPYLVFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 415
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ LT E + ++T YDLVANIVHDG+P+ G YR+H+ H G GKWYE+
Sbjct: 416 EYLTEE------------AQVSEKNTTYDLVANIVHDGKPTEGAYRIHVLHHGTGKWYEM 463
Query: 301 QDLHVTDILPQMITLTEAYIQIYE 324
QDL V DILPQMITL+EAYIQI++
Sbjct: 464 QDLQVIDILPQMITLSEAYIQIWK 487
>gi|301774987|ref|XP_002922905.1| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like [Ailuropoda
melanoleuca]
Length = 565
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLQNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 481
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 482 EYLSEE------------VQAAHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 529
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 530 QDLQVTDILPQMITLSEAYIQIWKRR 555
>gi|149036403|gb|EDL91021.1| ubiquitin specific protease 39 (predicted), isoform CRA_b [Rattus
norvegicus]
gi|183986109|gb|AAI66516.1| Usp39 protein [Rattus norvegicus]
Length = 564
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 241 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 300
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 301 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLP 360
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL EEY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 361 HPDLPAEEKEQLLHNEEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 420
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 421 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 480
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 481 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 528
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 529 QDLQVTDILPQMITLSEAYIQIWKRR 554
>gi|402891448|ref|XP_003908958.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Papio
anubis]
Length = 565
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 481
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 482 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 529
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 530 QDLQVTDILPQMITLSEAYIQIWKRR 555
>gi|344297576|ref|XP_003420473.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Loxodonta
africana]
Length = 565
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKTIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 481
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 482 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 529
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 530 QDLQVTDILPQMITLSEAYIQIWKCR 555
>gi|296223374|ref|XP_002757592.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1
[Callithrix jacchus]
Length = 565
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 481
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 482 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 529
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 530 QDLQVTDILPQMITLSEAYIQIWKRR 555
>gi|403303108|ref|XP_003942186.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 565
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 481
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 482 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 529
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 530 QDLQVTDILPQMITLSEAYIQIWKRR 555
>gi|387762647|ref|NP_001248624.1| U4/U6.U5 tri-snRNP-associated protein 2 [Macaca mulatta]
gi|380808926|gb|AFE76338.1| U4/U6.U5 tri-snRNP-associated protein 2 [Macaca mulatta]
gi|383415281|gb|AFH30854.1| U4/U6.U5 tri-snRNP-associated protein 2 [Macaca mulatta]
Length = 565
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 481
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 482 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 529
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 530 QDLQVTDILPQMITLSEAYIQIWKRR 555
>gi|26337039|dbj|BAC32203.1| unnamed protein product [Mus musculus]
Length = 564
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 241 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 300
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 301 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLP 360
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 361 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 420
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 421 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 480
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 481 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 528
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 529 QDLQVTDILPQMITLSEAYIQIWKRR 554
>gi|20070404|ref|NP_613058.1| U4/U6.U5 tri-snRNP-associated protein 2 [Mus musculus]
gi|88909656|sp|Q3TIX9.2|SNUT2_MOUSE RecName: Full=U4/U6.U5 tri-snRNP-associated protein 2; AltName:
Full=Inactive ubiquitin-specific peptidase 39
gi|12845893|dbj|BAB26944.1| unnamed protein product [Mus musculus]
gi|12858383|dbj|BAB31299.1| unnamed protein product [Mus musculus]
gi|20071704|gb|AAH26983.1| Ubiquitin specific peptidase 39 [Mus musculus]
gi|26353338|dbj|BAC40299.1| unnamed protein product [Mus musculus]
gi|74226993|dbj|BAE38302.1| unnamed protein product [Mus musculus]
gi|148666549|gb|EDK98965.1| ubiquitin specific peptidase 39, isoform CRA_a [Mus musculus]
Length = 564
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 241 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 300
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 301 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLP 360
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 361 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 420
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 421 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 480
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 481 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 528
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 529 QDLQVTDILPQMITLSEAYIQIWKRR 554
>gi|114578552|ref|XP_515591.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 4 [Pan
troglodytes]
gi|410217786|gb|JAA06112.1| ubiquitin specific peptidase 39 [Pan troglodytes]
gi|410292746|gb|JAA24973.1| ubiquitin specific peptidase 39 [Pan troglodytes]
gi|410338569|gb|JAA38231.1| ubiquitin specific peptidase 39 [Pan troglodytes]
gi|410338571|gb|JAA38232.1| ubiquitin specific peptidase 39 [Pan troglodytes]
Length = 565
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 481
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 482 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 529
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 530 QDLQVTDILPQMITLSEAYIQIWKRR 555
>gi|155372015|ref|NP_001094615.1| U4/U6.U5 tri-snRNP-associated protein 2 [Bos taurus]
gi|151556079|gb|AAI50036.1| USP39 protein [Bos taurus]
gi|296482482|tpg|DAA24597.1| TPA: ubiquitin specific protease 39 [Bos taurus]
Length = 565
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 481
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 482 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 529
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 530 QDLQVTDILPQMITLSEAYIQIWKRR 555
>gi|194220522|ref|XP_001916281.1| PREDICTED: LOW QUALITY PROTEIN: u4/U6.U5 tri-snRNP-associated
protein 2-like [Equus caballus]
Length = 565
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 481
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 482 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 529
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 530 QDLQVTDILPQMITLSEAYIQIWKRR 555
>gi|355565860|gb|EHH22289.1| hypothetical protein EGK_05524 [Macaca mulatta]
Length = 565
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 481
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 482 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 529
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 530 QDLQVTDILPQMITLSEAYIQIWKRR 555
>gi|37231483|gb|AAH01384.2| USP39 protein, partial [Homo sapiens]
Length = 562
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 239 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 298
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 299 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 358
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 359 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 418
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 419 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 478
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 479 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 526
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 527 QDLQVTDILPQMITLSEAYIQIWKRR 552
>gi|354487022|ref|XP_003505674.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Cricetulus
griseus]
gi|344237085|gb|EGV93188.1| U4/U6.U5 tri-snRNP-associated protein 2 [Cricetulus griseus]
Length = 564
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 241 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 300
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 301 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 360
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 361 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 420
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 421 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 480
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 481 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 528
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 529 QDLQVTDILPQMITLSEAYIQIWKRR 554
>gi|56550051|ref|NP_006581.2| U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Homo sapiens]
gi|376319199|ref|NP_001243654.1| U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Homo sapiens]
gi|88909655|sp|Q53GS9.2|SNUT2_HUMAN RecName: Full=U4/U6.U5 tri-snRNP-associated protein 2; AltName:
Full=Inactive ubiquitin-specific peptidase 39; AltName:
Full=SAD1 homolog; AltName: Full=U4/U6.U5
tri-snRNP-associated 65 kDa protein; Short=65K
gi|45595659|gb|AAH67273.1| USP39 protein [Homo sapiens]
gi|119619896|gb|EAW99490.1| ubiquitin specific peptidase 39, isoform CRA_a [Homo sapiens]
gi|119619898|gb|EAW99492.1| ubiquitin specific peptidase 39, isoform CRA_a [Homo sapiens]
gi|119619899|gb|EAW99493.1| ubiquitin specific peptidase 39, isoform CRA_a [Homo sapiens]
gi|158259925|dbj|BAF82140.1| unnamed protein product [Homo sapiens]
Length = 565
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 481
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 482 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 529
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 530 QDLQVTDILPQMITLSEAYIQIWKRR 555
>gi|426223527|ref|XP_004005926.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Ovis
aries]
Length = 565
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 481
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 482 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 529
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 530 QDLQVTDILPQMITLSEAYIQIWKRR 555
>gi|62897263|dbj|BAD96572.1| ubiquitin specific protease 39 variant [Homo sapiens]
Length = 565
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 481
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 482 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 529
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 530 QDLQVTDILPQMITLSEAYIQIWKRR 555
>gi|426336270|ref|XP_004029623.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Gorilla gorilla
gorilla]
Length = 516
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 193 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 252
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 253 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 312
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 313 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 372
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 373 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 432
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 433 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 480
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 481 QDLQVTDILPQMITLSEAYIQIWKRR 506
>gi|410955233|ref|XP_003984261.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Felis
catus]
Length = 565
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 481
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 482 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 529
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 530 QDLQVTDILPQMITLSEAYIQIWKRR 555
>gi|57098329|ref|XP_532977.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Canis
lupus familiaris]
Length = 561
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 238 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 297
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 298 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 357
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 358 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 417
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 418 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 477
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 478 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 525
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 526 QDLQVTDILPQMITLSEAYIQIWKRR 551
>gi|291386409|ref|XP_002709714.1| PREDICTED: ubiquitin specific protease 39 [Oryctolagus cuniculus]
Length = 565
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 481
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 482 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 529
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 530 QDLQVTDILPQMITLSEAYIQIWKRR 555
>gi|149590362|ref|XP_001518784.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Ornithorhynchus
anatinus]
Length = 529
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/328 (64%), Positives = 253/328 (77%), Gaps = 12/328 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 206 ALSNVPPLRNYFLEEENYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 265
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 266 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 325
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + ++ LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 326 HPDLPAEEKEHLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 385
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 386 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 445
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +E+T YDL+ANIVHDG+P+ G+YR+H+ H G GKWYE+
Sbjct: 446 EYLSEE------------VQAVHENTTYDLIANIVHDGKPTEGSYRIHVLHHGTGKWYEL 493
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTT 328
QDL VTDILPQMITL+EAYIQI++ R +
Sbjct: 494 QDLQVTDILPQMITLSEAYIQIWKRRDS 521
>gi|351709928|gb|EHB12847.1| U4/U6.U5 tri-snRNP-associated protein 2 [Heterocephalus glaber]
Length = 565
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 481
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 482 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 529
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 530 QDLQVTDILPQMITLSEAYIQIWKRR 555
>gi|391344446|ref|XP_003746510.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like isoform 1
[Metaseiulus occidentalis]
Length = 505
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/329 (62%), Positives = 253/329 (76%), Gaps = 15/329 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL V PLRD+ +R+ NY +KRPPGD+ FL+VQRFGEL+RKLWNPR+FK+HVSPHEMLQ
Sbjct: 158 ALSVVVPLRDFMIRDENYKDIKRPPGDTMFLIVQRFGELLRKLWNPRHFKAHVSPHEMLQ 217
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K+FQ T Q DPIDF+SWFLN+LH ALNGT K SSI+YKTF G M+V T+K+
Sbjct: 218 AVVLCSKKRFQITAQGDPIDFVSWFLNSLHIALNGTNKDSSSIIYKTFRGRMRVYTKKLF 277
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P + E + + EY+E + PF+YLT DLP PLFKD+ ENIIPQV L I+ K
Sbjct: 278 PTDPEHQ--PKTYDPSEYEEKMEKMPFMYLTVDLPSQPLFKDDQQENIIPQVPLNVIMAK 335
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN EKEYKTYK+N LKRFE+ LP YLILY+KRFTKNTFF EKNPTI+NFP+ NVDF
Sbjct: 336 FNGIQEKEYKTYKDNLLKRFELIKLPMYLILYMKRFTKNTFFTEKNPTIINFPINNVDFS 395
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
D+L+PE++ + E+ Y+LVANIVH+GEP+ GTYR H+ H+G GKWYE+
Sbjct: 396 DLLSPELR-----------RVNPENA-YELVANIVHEGEPNKGTYRCHVLHRGTGKWYEL 443
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTP 329
QDLHVT+ILPQMITL+E+YIQI+ RT+P
Sbjct: 444 QDLHVTEILPQMITLSESYIQIWR-RTSP 471
>gi|332239223|ref|XP_003268806.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1
[Nomascus leucogenys]
Length = 487
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 164 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 223
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 224 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 283
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 284 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 343
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 344 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 403
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 404 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 451
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 452 QDLQVTDILPQMITLSEAYIQIWKRR 477
>gi|376319203|ref|NP_001243656.1| U4/U6.U5 tri-snRNP-associated protein 2 isoform 3 [Homo sapiens]
gi|114578548|ref|XP_001167639.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 2 [Pan
troglodytes]
Length = 487
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 164 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 223
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 224 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 283
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 284 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 343
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 344 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 403
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 404 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 451
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 452 QDLQVTDILPQMITLSEAYIQIWKRR 477
>gi|301605952|ref|XP_002932588.1| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like [Xenopus
(Silurana) tropicalis]
Length = 501
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/326 (62%), Positives = 251/326 (76%), Gaps = 13/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 178 ALSNVPPLRNYFLEEENYCDIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 237
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN L+ AL G KKK +IV F GSM++ T+K+P
Sbjct: 238 AVVLCSKKNFQITKQGDGVDFLSWFLNALNSALGGNKKK-KTIVTDVFQGSMRIFTKKLP 296
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++L+ EEY+E ESPF+YLT DLP PL+KDE + IIPQV L++IL K
Sbjct: 297 HPDLPSEEKEQLMQNEEYQEKMLESPFMYLTLDLPTAPLYKDEKEQLIIPQVPLFSILGK 356
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPP+LI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 357 FNGITEKEYKTYKENFLKRFQLTQLPPFLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 416
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L E ++ +++T YDL+AN+VHDG+P+ G+YR+H+ H G GKWYE+
Sbjct: 417 EYLAEE------------FQSSHKNTTYDLIANVVHDGKPNEGSYRIHVLHHGTGKWYEL 464
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 465 QDLQVTDILPQMITLSEAYIQIWKRR 490
>gi|74198469|dbj|BAE39717.1| unnamed protein product [Mus musculus]
Length = 564
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 241 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 300
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 301 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLP 360
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 361 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 420
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVE+NPTIVNFP+ NVD
Sbjct: 421 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEENPTIVNFPITNVDLR 480
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 481 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 528
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 529 QDLQVTDILPQMITLSEAYIQIWKRR 554
>gi|440909376|gb|ELR59288.1| U4/U6.U5 tri-snRNP-associated protein 2, partial [Bos grunniens
mutus]
Length = 476
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 153 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 212
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 213 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 272
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 273 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 332
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 333 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 392
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 393 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 440
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 441 QDLQVTDILPQMITLSEAYIQIWKRR 466
>gi|348566421|ref|XP_003469000.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Cavia
porcellus]
Length = 565
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 481
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 482 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 529
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 530 QDLQVTDILPQMITLSEAYIQIWKRR 555
>gi|391344448|ref|XP_003746511.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like isoform 2
[Metaseiulus occidentalis]
Length = 492
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/329 (62%), Positives = 253/329 (76%), Gaps = 15/329 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL V PLRD+ +R+ NY +KRPPGD+ FL+VQRFGEL+RKLWNPR+FK+HVSPHEMLQ
Sbjct: 145 ALSVVVPLRDFMIRDENYKDIKRPPGDTMFLIVQRFGELLRKLWNPRHFKAHVSPHEMLQ 204
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K+FQ T Q DPIDF+SWFLN+LH ALNGT K SSI+YKTF G M+V T+K+
Sbjct: 205 AVVLCSKKRFQITAQGDPIDFVSWFLNSLHIALNGTNKDSSSIIYKTFRGRMRVYTKKLF 264
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P + E + + EY+E + PF+YLT DLP PLFKD+ ENIIPQV L I+ K
Sbjct: 265 PTDPEHQ--PKTYDPSEYEEKMEKMPFMYLTVDLPSQPLFKDDQQENIIPQVPLNVIMAK 322
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN EKEYKTYK+N LKRFE+ LP YLILY+KRFTKNTFF EKNPTI+NFP+ NVDF
Sbjct: 323 FNGIQEKEYKTYKDNLLKRFELIKLPMYLILYMKRFTKNTFFTEKNPTIINFPINNVDFS 382
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
D+L+PE++ + E+ Y+LVANIVH+GEP+ GTYR H+ H+G GKWYE+
Sbjct: 383 DLLSPELR-----------RVNPENA-YELVANIVHEGEPNKGTYRCHVLHRGTGKWYEL 430
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTP 329
QDLHVT+ILPQMITL+E+YIQI+ RT+P
Sbjct: 431 QDLHVTEILPQMITLSESYIQIWR-RTSP 458
>gi|281342281|gb|EFB17865.1| hypothetical protein PANDA_011952 [Ailuropoda melanoleuca]
Length = 551
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/322 (64%), Positives = 250/322 (77%), Gaps = 12/322 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLQNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 481
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 482 EYLSEE------------VQAAHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 529
Query: 301 QDLHVTDILPQMITLTEAYIQI 322
QDL VTDILPQMITL+EAYIQ+
Sbjct: 530 QDLQVTDILPQMITLSEAYIQV 551
>gi|13926071|gb|AAK49524.1|AF353989_1 U4/U6.U5 tri-snRNP-associated 65 kDa protein [Homo sapiens]
Length = 565
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/326 (64%), Positives = 252/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP P +KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPFYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 481
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 482 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 529
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 530 QDLQVTDILPQMITLSEAYIQIWKRR 555
>gi|432873973|ref|XP_004072409.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Oryzias
latipes]
Length = 488
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/324 (62%), Positives = 251/324 (77%), Gaps = 13/324 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
A +V PLR+YFL E NY ++RPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 175 AFSNVPPLRNYFLEEENYRDIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 234
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DF++WFLN +H AL GTKKK SI+ K F GSM++ ++K+P
Sbjct: 235 AVVLCSKKNFQITKQGDAVDFMTWFLNAMHGALGGTKKK-PSILTKVFQGSMRIFSKKLP 293
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + ++ LL+TEEY+E +ES FL+LT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 294 HPDLPPEEKEALLVTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGK 353
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 354 FNGSTEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 413
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ LT E +A ++T YDL+AN+VHDG+P+ G+YR+H+ H G GKWYE+
Sbjct: 414 EYLTEE------------AQATEKNTTYDLIANVVHDGKPTEGSYRIHVLHHGTGKWYEM 461
Query: 301 QDLHVTDILPQMITLTEAYIQIYE 324
QDL VTDILPQMITL+EAYIQI++
Sbjct: 462 QDLQVTDILPQMITLSEAYIQIWK 485
>gi|148666550|gb|EDK98966.1| ubiquitin specific peptidase 39, isoform CRA_b [Mus musculus]
Length = 604
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/329 (63%), Positives = 252/329 (76%), Gaps = 12/329 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 241 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 300
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 301 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLP 360
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 361 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 420
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 421 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 480
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 481 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 528
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTP 329
QDL VTDILPQMITL+EAYIQ + T P
Sbjct: 529 QDLQVTDILPQMITLSEAYIQHVVVDTLP 557
>gi|332239227|ref|XP_003268808.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 3
[Nomascus leucogenys]
Length = 462
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 139 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 198
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 199 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 258
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 259 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 318
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 319 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 378
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 379 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 426
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 427 QDLQVTDILPQMITLSEAYIQIWKRR 452
>gi|126305343|ref|XP_001363937.1| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2 [Monodelphis
domestica]
Length = 572
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/328 (63%), Positives = 253/328 (77%), Gaps = 12/328 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 249 ALSNVPPLRNYFLEEENYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 308
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 309 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 368
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 369 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 428
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 429 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 488
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A ++ T YDL+ANIVHDG+P+ G+YR+H+ H G GKWYE+
Sbjct: 489 EYLSEE------------VQAVHKDTTYDLIANIVHDGKPTEGSYRIHVLHHGTGKWYEL 536
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTT 328
QDL VTDILPQMITL+EAYIQI++ R +
Sbjct: 537 QDLQVTDILPQMITLSEAYIQIWKRRDS 564
>gi|376319206|ref|NP_001243657.1| U4/U6.U5 tri-snRNP-associated protein 2 isoform 4 [Homo sapiens]
gi|410035306|ref|XP_003949873.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Pan
troglodytes]
gi|194379788|dbj|BAG58246.1| unnamed protein product [Homo sapiens]
Length = 462
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 139 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 198
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 199 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 258
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 259 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 318
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 319 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 378
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 379 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 426
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 427 QDLQVTDILPQMITLSEAYIQIWKRR 452
>gi|332239225|ref|XP_003268807.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 2
[Nomascus leucogenys]
Length = 449
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 126 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 185
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 186 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 245
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 246 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 305
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 306 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 365
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 366 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 413
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 414 QDLQVTDILPQMITLSEAYIQIWKRR 439
>gi|157819503|ref|NP_001100067.1| U4/U6.U5 tri-snRNP-associated protein 2 [Rattus norvegicus]
gi|149036402|gb|EDL91020.1| ubiquitin specific protease 39 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 568
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/337 (62%), Positives = 255/337 (75%), Gaps = 12/337 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 241 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 300
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 301 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLP 360
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL EEY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 361 HPDLPAEEKEQLLHNEEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 420
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 421 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 480
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 481 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 528
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPTAMSEG 337
QDL VTDILPQMITL+EAYIQ + + +++G
Sbjct: 529 QDLQVTDILPQMITLSEAYIQHMPSLSASAGRTLTDG 565
>gi|327287130|ref|XP_003228282.1| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like [Anolis
carolinensis]
Length = 463
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/332 (63%), Positives = 252/332 (75%), Gaps = 12/332 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 139 ALSNVPPLRNYFLEEENYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 198
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 199 AVVLCSKKNFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 258
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL EEY+E ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 259 HPDLPAEEKEQLLQNEEYQEKMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 318
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 319 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 378
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+P+ G YR+H+ H G GKWYE+
Sbjct: 379 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPAEGAYRIHVLHHGTGKWYEL 426
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
QDL VTDILPQMITL+EAYIQI++ R T
Sbjct: 427 QDLQVTDILPQMITLSEAYIQIWKRRDNKEET 458
>gi|395508822|ref|XP_003758708.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Sarcophilus
harrisii]
Length = 607
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/328 (63%), Positives = 254/328 (77%), Gaps = 12/328 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 284 ALSNVPPLRNYFLEEENYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 343
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 344 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 403
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 404 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 463
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 464 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 523
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+P+ G+YR+H+ H G GKWYE+
Sbjct: 524 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPTEGSYRIHVLHHGTGKWYEL 571
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTT 328
QDL VTDILPQMITL+EAYIQI++ R +
Sbjct: 572 QDLQVTDILPQMITLSEAYIQIWKRRDS 599
>gi|348528502|ref|XP_003451756.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Oreochromis
niloticus]
Length = 501
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/324 (62%), Positives = 248/324 (76%), Gaps = 13/324 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
A +V PLR+YFL E NY ++RPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 177 AFSNVPPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 236
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DF++WFLN LH AL GTKKK SI+ K F G M++ ++K+P
Sbjct: 237 AVVLCSKKNFQITKQGDAVDFMTWFLNALHGALGGTKKK-PSIITKAFQGYMRIFSKKLP 295
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + ++ LL T+EY+E +ES FL+LT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 296 HPDLPPEEKEALLTTDEYQEQMSESSFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 355
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 356 FNGSTEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 415
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ LT E +A ++T YDL+AN+VHDG+P+ G YR+H+ H G GKWYE+
Sbjct: 416 EYLTEE------------AQATEKNTTYDLIANVVHDGKPTEGAYRIHVLHHGTGKWYEM 463
Query: 301 QDLHVTDILPQMITLTEAYIQIYE 324
QDL VTDILPQMITL+EAYIQI++
Sbjct: 464 QDLQVTDILPQMITLSEAYIQIWK 487
>gi|195174706|ref|XP_002028113.1| GL21350 [Drosophila persimilis]
gi|194115853|gb|EDW37896.1| GL21350 [Drosophila persimilis]
Length = 300
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/311 (64%), Positives = 241/311 (77%), Gaps = 12/311 (3%)
Query: 21 VKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAV-VLWSRKQFQFTEQSDPI 79
+KRPPGDS F LVQRFGELMRK + + + +VSPHE VLWS K+FQ TEQ DPI
Sbjct: 1 IKRPPGDSMFTLVQRFGELMRKCASAQLQRLNVSPHETAAGRWVLWSSKRFQITEQGDPI 60
Query: 80 DFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYK 139
DFLSWFLNTLHRAL G K+ +SSI+Y FLG M++ TRK+PPVEL++ +++LL TEEY+
Sbjct: 61 DFLSWFLNTLHRALKGNKQPNSSILYNIFLGEMQIFTRKMPPVELDDAAKEKLLATEEYQ 120
Query: 140 ETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKR 199
+ + F+YLTCDLPPPPLF DE ENIIPQVNLY +L KFN +EKEYKTYK+NF+KR
Sbjct: 121 DQVEHTNFIYLTCDLPPPPLFTDEFRENIIPQVNLYQLLGKFNGSAEKEYKTYKDNFMKR 180
Query: 200 FEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLV 259
FEIT LP ++ILY+KRFTKNTFF+EKNPTIVNFP+KNVDFGDIL + K
Sbjct: 181 FEITRLPQFIILYIKRFTKNTFFLEKNPTIVNFPIKNVDFGDILGMRQRDK--------- 231
Query: 260 KAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAY 319
+ T Y+LVANIVHDG+P GTYR H+ HK G+WYE+QDLHVT+ILPQMITLTE+Y
Sbjct: 232 --DVKDTKYNLVANIVHDGDPKKGTYRAHILHKANGQWYEMQDLHVTEILPQMITLTESY 289
Query: 320 IQIYELRTTPS 330
IQIYE + PS
Sbjct: 290 IQIYERSSDPS 300
>gi|355751467|gb|EHH55722.1| hypothetical protein EGM_04981 [Macaca fascicularis]
Length = 563
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 253/326 (77%), Gaps = 13/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 241 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 300
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 301 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 360
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 361 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 420
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 421 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPI-NVDLR 479
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 480 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 527
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 528 QDLQVTDILPQMITLSEAYIQIWKRR 553
>gi|221043956|dbj|BAH13655.1| unnamed protein product [Homo sapiens]
Length = 487
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/326 (64%), Positives = 252/326 (77%), Gaps = 12/326 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 164 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 223
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN H AL GTKKK +IV F GSM++ T+K+P
Sbjct: 224 AVVLCSKKTFQITKQGDGVDFLSWFLNAPHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 283
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 284 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 343
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 344 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 403
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 404 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 451
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 452 QDLQVTDILPQMITLSEAYIQIWKRR 477
>gi|156395358|ref|XP_001637078.1| predicted protein [Nematostella vectensis]
gi|156224187|gb|EDO45015.1| predicted protein [Nematostella vectensis]
Length = 470
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/325 (61%), Positives = 250/325 (76%), Gaps = 15/325 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
A +TP+R+YFLRE NY +KRPPGD F LVQR+GEL+RKLWNPRNFK+HVSPHEMLQ
Sbjct: 153 AFAFITPIRNYFLREENYNVIKRPPGDIMFQLVQRYGELLRKLWNPRNFKAHVSPHEMLQ 212
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K+FQFT+Q DPI+FL WFLN LH ALNGTKK SSI++K+F G M++ +RK+P
Sbjct: 213 AVVLCSKKRFQFTKQGDPIEFLPWFLNALHTALNGTKKMSSSIIFKSFQGKMRIYSRKVP 272
Query: 121 PVEL---EEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
E+ EEK Q L EEY+ET +ESPFL L D+P PLFKDE +NIIPQV L ++
Sbjct: 273 QTEVQCNEEKAEQMKL--EEYQETVSESPFLVLALDIPASPLFKDEFQQNIIPQVPLSSL 330
Query: 178 LTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNV 237
L+KF+ +EKEYKTYKE+F+KR+E+ LP YLIL +KRFTKNTFFVEKN T+VNFPVK+V
Sbjct: 331 LSKFDGTTEKEYKTYKESFIKRYELLRLPQYLILCIKRFTKNTFFVEKNATVVNFPVKSV 390
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKW 297
D + L+ + V+ + T YDLVANI HDGEP +GTYR+H+ H+G KW
Sbjct: 391 DLAEYLSSD----------PAVQDAHPHTTYDLVANICHDGEPESGTYRLHVLHRGANKW 440
Query: 298 YEIQDLHVTDILPQMITLTEAYIQI 322
YE+QDLHV DILPQ+ITL+ +YIQ+
Sbjct: 441 YELQDLHVKDILPQVITLSNSYIQV 465
>gi|405963740|gb|EKC29293.1| U4/U6.U5 tri-snRNP-associated protein 2 [Crassostrea gigas]
Length = 658
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/334 (64%), Positives = 268/334 (80%), Gaps = 15/334 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HVTPLR++FL+E NY ++KRPPGD FL VQRFGEL+RKLWNPRNFK+HVSPHEMLQ
Sbjct: 312 ALSHVTPLRNFFLQEDNYKKIKRPPGDQMFLTVQRFGELLRKLWNPRNFKAHVSPHEMLQ 371
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K+FQ TEQ D ++F+SWFLN LH A+NGTKK +S+IV KTF G M+V TRK+
Sbjct: 372 AVVLCSKKKFQITEQGDALEFMSWFLNALHLAMNGTKKLNSTIVNKTFRGKMRVYTRKVL 431
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P++L+E+ +++LLLT+EY E E P+LYLTCDLPPPPL+ DE+ ENIIPQV ++LTK
Sbjct: 432 PIDLKEEEKEKLLLTDEYLEHAEEIPWLYLTCDLPPPPLYPDELQENIIPQVPFASLLTK 491
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN SEKEYKT+K++ LKRF+IT LP +LI+++KRFTKN F EKNPTIVNFP+KN+DFG
Sbjct: 492 FNGVSEKEYKTHKDSQLKRFQITRLPNFLIIFIKRFTKNYFIKEKNPTIVNFPIKNIDFG 551
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP--SNGTYRVHLYHKGIGKWY 298
D+L PE + + +T YDL+ANIVHDGEP GTYRVH+ HKG KWY
Sbjct: 552 DLLAPE------------HRVLHRNTTYDLMANIVHDGEPERGKGTYRVHVLHKGTQKWY 599
Query: 299 EIQDLHVTDILPQMITLTEAYIQIYELR-TTPSP 331
E+QDLHVTDILPQMI L+E+YIQI+ELR P+P
Sbjct: 600 EMQDLHVTDILPQMIPLSESYIQIFELRKDIPNP 633
>gi|196011076|ref|XP_002115402.1| hypothetical protein TRIADDRAFT_59295 [Trichoplax adhaerens]
gi|190582173|gb|EDV22247.1| hypothetical protein TRIADDRAFT_59295 [Trichoplax adhaerens]
Length = 527
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/323 (61%), Positives = 244/323 (75%), Gaps = 12/323 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+YFL+E NY KRPPGD+SF LVQRFGEL+RK+WNP NFK+H+SPHEMLQ
Sbjct: 168 ALAHVVPLRNYFLQENNYKNTKRPPGDTSFRLVQRFGELIRKIWNPSNFKTHISPHEMLQ 227
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVV S+KQFQ TEQ DPI FLSW LN LH +LNGTKK SSI+YKTF G M++ RK+
Sbjct: 228 AVVYCSKKQFQITEQGDPITFLSWMLNHLHMSLNGTKKMRSSIIYKTFCGQMRIYKRKVI 287
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P E E + L+ +EYKET++ +PFLYLT DLPP PL++DE+ ENIIPQV L +L K
Sbjct: 288 PEETPELQKLELMELDEYKETQSVAPFLYLTLDLPPAPLYQDELNENIIPQVPLSVLLAK 347
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
F+ SE+EYKTYKE F+KRFE+ LP YLILYVKRFT+N FFVEKNPTIVNFP+ +D
Sbjct: 348 FDGTSEREYKTYKETFMKRFELIRLPRYLILYVKRFTRNNFFVEKNPTIVNFPIVELDMA 407
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP--SNGTYRVHLYHKGIGKWY 298
+ L+ + V+ + T Y+LVANI+HDG+P G YRVHL H+G +WY
Sbjct: 408 EYLSSD----------PAVQDAHPVTTYNLVANIIHDGQPGAGKGIYRVHLRHRGSKQWY 457
Query: 299 EIQDLHVTDILPQMITLTEAYIQ 321
++QDLHV DILPQ+ITL+EAYIQ
Sbjct: 458 QVQDLHVEDILPQIITLSEAYIQ 480
>gi|312073962|ref|XP_003139756.1| ubiquitin specific peptidase 39 [Loa loa]
Length = 692
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/328 (61%), Positives = 246/328 (75%), Gaps = 12/328 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRDYFLRE NY +KRPPGD LL +RFGEL+RKLWNP+ FK+HVSPHEMLQ
Sbjct: 354 ALSHVPPLRDYFLREENYINIKRPPGDKLTLLPKRFGELIRKLWNPKAFKAHVSPHEMLQ 413
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
A VL S K+FQ T+Q D +FL++ LNTLH ALNGT+K SSI+YK F G + TRK+
Sbjct: 414 ASVLCSSKKFQITKQGDAAEFLNFLLNTLHIALNGTRKTSSSIIYKIFRGRLHEFTRKVI 473
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
PVE E+ R+ LL T+EYKE + E PFLYLT DLP PL++DE+L+NIIPQV L +LTK
Sbjct: 474 PVETTEEARKNLLETDEYKEKKLEIPFLYLTLDLPAAPLYRDELLQNIIPQVPLSVLLTK 533
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTY ENF+KRF++ LPPYLI+ KRF KN +FVEKNPTIVNFP+ NVD
Sbjct: 534 FNGATEKEYKTYSENFMKRFQLVRLPPYLIITYKRFHKNQWFVEKNPTIVNFPISNVDLY 593
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
D L E++ + KY T YDLV+NIVHDG PS+G+YR+ + H G KWYE+
Sbjct: 594 DCLAEEMRPLH----------KY--TTYDLVSNIVHDGPPSSGSYRIQILHNGTQKWYEL 641
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTT 328
+DLHV +ILPQMITL E+YIQI+ L T+
Sbjct: 642 EDLHVKEILPQMITLAESYIQIWRLNTS 669
>gi|393907486|gb|EFO24316.2| ubiquitin specific peptidase 39 [Loa loa]
Length = 698
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/328 (61%), Positives = 246/328 (75%), Gaps = 12/328 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRDYFLRE NY +KRPPGD LL +RFGEL+RKLWNP+ FK+HVSPHEMLQ
Sbjct: 360 ALSHVPPLRDYFLREENYINIKRPPGDKLTLLPKRFGELIRKLWNPKAFKAHVSPHEMLQ 419
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
A VL S K+FQ T+Q D +FL++ LNTLH ALNGT+K SSI+YK F G + TRK+
Sbjct: 420 ASVLCSSKKFQITKQGDAAEFLNFLLNTLHIALNGTRKTSSSIIYKIFRGRLHEFTRKVI 479
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
PVE E+ R+ LL T+EYKE + E PFLYLT DLP PL++DE+L+NIIPQV L +LTK
Sbjct: 480 PVETTEEARKNLLETDEYKEKKLEIPFLYLTLDLPAAPLYRDELLQNIIPQVPLSVLLTK 539
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTY ENF+KRF++ LPPYLI+ KRF KN +FVEKNPTIVNFP+ NVD
Sbjct: 540 FNGATEKEYKTYSENFMKRFQLVRLPPYLIITYKRFHKNQWFVEKNPTIVNFPISNVDLY 599
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
D L E++ + KY T YDLV+NIVHDG PS+G+YR+ + H G KWYE+
Sbjct: 600 DCLAEEMRPLH----------KY--TTYDLVSNIVHDGPPSSGSYRIQILHNGTQKWYEL 647
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTT 328
+DLHV +ILPQMITL E+YIQI+ L T+
Sbjct: 648 EDLHVKEILPQMITLAESYIQIWRLNTS 675
>gi|90075992|dbj|BAE87676.1| unnamed protein product [Macaca fascicularis]
Length = 485
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/310 (64%), Positives = 241/310 (77%), Gaps = 12/310 (3%)
Query: 17 NYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQS 76
NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQAVVL S+K FQ T+Q
Sbjct: 178 NYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQG 237
Query: 77 DPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTE 136
D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P +L + +++LL +
Sbjct: 238 DGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHND 297
Query: 137 EYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENF 196
EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL KFN +EKEYKTYKENF
Sbjct: 298 EYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENF 357
Query: 197 LKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMY 256
LKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD + L+ E
Sbjct: 358 LKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEE---------- 407
Query: 257 DLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLT 316
V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+QDL VTDILPQMITL+
Sbjct: 408 --VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLS 465
Query: 317 EAYIQIYELR 326
EAYIQI++ R
Sbjct: 466 EAYIQIWKRR 475
>gi|324506430|gb|ADY42746.1| U4/U6.U5 tri-snRNP-associated protein 2 [Ascaris suum]
Length = 727
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/325 (60%), Positives = 241/325 (74%), Gaps = 12/325 (3%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+YFLRE NYA +KRPPGD LL +RFGEL+RKLWNP+ FK+HVSPHEMLQ
Sbjct: 386 ALSHVPPLRNYFLREENYAGIKRPPGDKLSLLPKRFGELIRKLWNPKAFKAHVSPHEMLQ 445
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
A VL S ++FQ T+Q D +FL++ LNTLH ALNGTKK SSIVY+ F G M TRK+
Sbjct: 446 ASVLCSERKFQITKQGDASEFLNFLLNTLHIALNGTKKTSSSIVYRIFRGRMHEYTRKVM 505
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
PVE E+ R+ L +++Y+E + PFLYLT DLP PL++DE+++NIIPQV L +LTK
Sbjct: 506 PVETTEEERRVLSESDQYQEKMKDLPFLYLTLDLPAAPLYRDELMQNIIPQVPLSVLLTK 565
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN EKEYKTY ENF+KRFE+ LPPYLI+ KRF KN +FVEKNPTIVNFP+ NVD
Sbjct: 566 FNGAIEKEYKTYNENFMKRFELVRLPPYLIIMYKRFHKNQWFVEKNPTIVNFPISNVDLY 625
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
D L P ++ ++ T YDLV+NIVHDG P +G+YR+ L H G KWYE+
Sbjct: 626 DCLAP------------ASRSLHKFTTYDLVSNIVHDGPPESGSYRIQLLHNGTQKWYEL 673
Query: 301 QDLHVTDILPQMITLTEAYIQIYEL 325
+DLHV +ILPQMITL E+YIQI++L
Sbjct: 674 EDLHVKEILPQMITLAESYIQIWKL 698
>gi|432102466|gb|ELK30043.1| U4/U6.U5 tri-snRNP-associated protein 2 [Myotis davidii]
Length = 608
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/372 (56%), Positives = 254/372 (68%), Gaps = 58/372 (15%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 240 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 299
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 300 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 359
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 360 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 419
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 420 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 479
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYH--------- 291
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H
Sbjct: 480 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHAPGSSPSA 527
Query: 292 -------------------------------------KGIGKWYEIQDLHVTDILPQMIT 314
+G GKWYE+QDL VTDILPQMIT
Sbjct: 528 QRMFLWFMSLKRTSKTVLTPPLYSEETCRQSRSNLCPEGTGKWYELQDLQVTDILPQMIT 587
Query: 315 LTEAYIQIYELR 326
L+EAYIQI++ R
Sbjct: 588 LSEAYIQIWKRR 599
>gi|397491429|ref|XP_003816666.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Pan paniscus]
Length = 545
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/326 (62%), Positives = 240/326 (73%), Gaps = 32/326 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L S F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDL--------------------STFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 401
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 402 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 461
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 462 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 509
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 510 QDLQVTDILPQMITLSEAYIQIWKRR 535
>gi|291234279|ref|XP_002737076.1| PREDICTED: ubiquitin specific peptidase 39-like [Saccoglossus
kowalevskii]
Length = 455
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/294 (64%), Positives = 236/294 (80%), Gaps = 14/294 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
A HV PLR+YFLRE NYA +KRPPGD LL QRFGELMRK+WNPRNFK+HVSPHEMLQ
Sbjct: 161 AFAHVPPLRNYFLREENYAHIKRPPGDIMILLSQRFGELMRKMWNPRNFKAHVSPHEMLQ 220
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K++Q T Q DP++F+SWFLN LH ALNG KKK+SSIVYKTF GSM++ +RK+P
Sbjct: 221 AVVLCSKKKYQITSQGDPVEFMSWFLNALHIALNGGKKKNSSIVYKTFQGSMRIYSRKLP 280
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P ++E+ +Q L+ +EEY++T ++SPFLYL D+PP PLFKDE+ +NIIPQV L+T+L+K
Sbjct: 281 PADVEDLEKQALIQSEEYQDTTSDSPFLYLMLDIPPAPLFKDELEQNIIPQVPLHTLLSK 340
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
F+ SEKEYKTYK++ +K+FE+T LP YL+L +KRFTKN FFVEKNPTIVNFPVKNVDF
Sbjct: 341 FDGISEKEYKTYKDSTMKKFELTHLPRYLLLCIKRFTKNIFFVEKNPTIVNFPVKNVDFR 400
Query: 241 DILT--PEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHK 292
+ L PE++ K+ KY T YDL+ANIVH+GEPS GT+R H+ HK
Sbjct: 401 EFLCKDPEIQKKH----------KY--TTYDLMANIVHEGEPSKGTFRAHVLHK 442
>gi|340370374|ref|XP_003383721.1| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like [Amphimedon
queenslandica]
Length = 469
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/331 (58%), Positives = 242/331 (73%), Gaps = 15/331 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNF--KSHVSPHEM 58
L H+TP RDYFL E NY + PPGD +F LV R GEL RKLWNPR F ++HVSPHEM
Sbjct: 147 TLAHITPFRDYFLNEDNYLSITPPPGDQTFTLVHRLGELFRKLWNPRYFLFRAHVSPHEM 206
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD-SSIVYKTFLGSMKVKTR 117
LQAV S+K+F+ EQ DP++F+SW LNTLH AL+ K+K+ SSIVY TF G MK+ TR
Sbjct: 207 LQAVSSVSKKRFKIVEQGDPVEFMSWLLNTLHFALSAGKRKNKSSIVYDTFQGEMKIYTR 266
Query: 118 KIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
K+PP E L EEYK+ E +PFLYL DLP PPLF+DE+ +NIIPQ+ L+ +
Sbjct: 267 KLPPQTENEDEMMDYLKMEEYKQKEETTPFLYLALDLPAPPLFQDELEKNIIPQIPLFDL 326
Query: 178 LTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNV 237
L KF+ +EKEYKT++E+++K+FE+T LPPYLIL +KRFTKN FFVEKNPTIVNFP+K++
Sbjct: 327 LKKFDGTTEKEYKTHRESYVKKFELTKLPPYLILCIKRFTKNNFFVEKNPTIVNFPIKDI 386
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGE--PSNGTYRVHLYHKGIG 295
D + L+ + V+ + T+YDLVAN+ HDG+ P GTYRVHL HKG
Sbjct: 387 DMSEFLSSDPA----------VQDSHPHTVYDLVANVCHDGQAGPGKGTYRVHLRHKGAN 436
Query: 296 KWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
+WYE+QDL+V D+LPQMITL EAYIQI+ELR
Sbjct: 437 QWYELQDLNVKDLLPQMITLAEAYIQIWELR 467
>gi|444518815|gb|ELV12403.1| U4/U6.U5 tri-snRNP-associated protein 2 [Tupaia chinensis]
Length = 544
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/326 (61%), Positives = 238/326 (73%), Gaps = 36/326 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 245 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 304
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +
Sbjct: 305 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKT------------------ 346
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+ +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 347 ------EEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 400
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD
Sbjct: 401 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR 460
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+
Sbjct: 461 EYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYEL 508
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 509 QDLQVTDILPQMITLSEAYIQIWKRR 534
>gi|410035308|ref|XP_003949874.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Pan
troglodytes]
gi|11493496|gb|AAG35521.1|AF130117_55 PRO2855 [Homo sapiens]
gi|90085477|dbj|BAE91479.1| unnamed protein product [Macaca fascicularis]
gi|119619897|gb|EAW99491.1| ubiquitin specific peptidase 39, isoform CRA_b [Homo sapiens]
gi|193786396|dbj|BAG51679.1| unnamed protein product [Homo sapiens]
gi|343958404|dbj|BAK63057.1| U4/U6.U5 tri-snRNP-associated protein 2 [Pan troglodytes]
Length = 296
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/297 (64%), Positives = 232/297 (78%), Gaps = 12/297 (4%)
Query: 30 FLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTL 89
FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQAVVL S+K FQ T+Q D +DFLSWFLN L
Sbjct: 2 FLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNAL 61
Query: 90 HRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLY 149
H AL GTKKK +IV F GSM++ T+K+P +L + +++LL +EY+ET ES F+Y
Sbjct: 62 HSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMY 121
Query: 150 LTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYL 209
LT DLP PL+KDE + IIPQV L+ IL KFN +EKEYKTYKENFLKRF++T LPPYL
Sbjct: 122 LTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYL 181
Query: 210 ILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYD 269
I +KRFTKN FFVEKNPTIVNFP+ NVD + L+ E V+A +++T YD
Sbjct: 182 IFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEE------------VQAVHKNTTYD 229
Query: 270 LVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
L+ANIVHDG+PS G+YR+H+ H G GKWYE+QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 230 LIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRR 286
>gi|193785997|dbj|BAG50973.1| unnamed protein product [Homo sapiens]
Length = 296
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/297 (64%), Positives = 232/297 (78%), Gaps = 12/297 (4%)
Query: 30 FLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTL 89
FLLVQRFGELMRKLWNPRNF++HVSPHEMLQAVVL S+K FQ T+Q D +DFLSWFLN L
Sbjct: 2 FLLVQRFGELMRKLWNPRNFRAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNAL 61
Query: 90 HRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLY 149
H AL GTKKK +IV F GSM++ T+K+P +L + +++LL +EY+ET ES F+Y
Sbjct: 62 HSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMY 121
Query: 150 LTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYL 209
LT DLP PL+KDE + IIPQV L+ IL KFN +EKEYKTYKENFLKRF++T LPPYL
Sbjct: 122 LTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYL 181
Query: 210 ILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYD 269
I +KRFTKN FFVEKNPTIVNFP+ NVD + L+ E V+A +++T YD
Sbjct: 182 IFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEE------------VQAVHKNTTYD 229
Query: 270 LVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
L+ANIVHDG+PS G+YR+H+ H G GKWYE+QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 230 LIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRR 286
>gi|260830804|ref|XP_002610350.1| hypothetical protein BRAFLDRAFT_120059 [Branchiostoma floridae]
gi|229295715|gb|EEN66360.1| hypothetical protein BRAFLDRAFT_120059 [Branchiostoma floridae]
Length = 464
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/338 (59%), Positives = 240/338 (71%), Gaps = 51/338 (15%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV+PLRDYFL+E NY +KRPPGD FL+VQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 172 ALSHVSPLRDYFLQEENYKDIKRPPGDIMFLIVQRFGELMRKLWNPRNFKAHVSPHEMLQ 231
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K+FQ TEQ DPIDFLSWFLN +H ++ G KK S V
Sbjct: 232 AVVLCSKKRFQITEQGDPIDFLSWFLNAMHASMGGNKKVMSKTV---------------- 275
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
T SPF+YLT DLPPPPLF+DE +NIIPQV L +L K
Sbjct: 276 ----------------------TTSPFMYLTLDLPPPPLFQDEYEQNIIPQVPLANLLAK 313
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN E+EKEYK+YK++ LKRFE+T LPPYLILYVKRFTKN F+VEKNPTIV FPVKN+D
Sbjct: 314 FNGEAEKEYKSYKDSTLKRFELTRLPPYLILYVKRFTKNNFYVEKNPTIVTFPVKNIDLR 373
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP--SNGTYRVHLYHKGIGKWY 298
+ L+ + + ++ K+ +T YDL+ANIVHDG P GTYRVH+YHKG G+WY
Sbjct: 374 EYLSKDPE----------IQKKHPNTTYDLIANIVHDGLPGAGKGTYRVHIYHKGSGQWY 423
Query: 299 EIQDLHVTDILPQMITLTEAYIQIYELR-TTPSPTAMS 335
E+QDLHV DILPQMITL+E+YIQI+ELR PS T ++
Sbjct: 424 EMQDLHVADILPQMITLSESYIQIWELRKDQPSDTDIT 461
>gi|358335317|dbj|GAA29316.2| U4/U6.U5 tri-snRNP-associated protein 2 [Clonorchis sinensis]
Length = 617
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/332 (55%), Positives = 236/332 (71%), Gaps = 23/332 (6%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV+PLRDYFL NY + D LLVQRFGEL+RKLWNPRNFK+HVSPHE LQA
Sbjct: 260 LAHVSPLRDYFLNAANYRGMSTTSSDQMHLLVQRFGELIRKLWNPRNFKTHVSPHEFLQA 319
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALN--------GTKKK-DSSIVYKTFLGSM 112
VVL SRK+FQFTEQ D ++FLSW LN L AL+ G K + ++V + G+M
Sbjct: 320 VVLCSRKRFQFTEQGDAVEFLSWLLNALDLALHRKRLSTKPGPKATPERTVVSRALRGTM 379
Query: 113 KVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQV 172
++ +RKI PV + E+ + L EY + E+ F YLTCDLPPPPL+ DE E+IIPQV
Sbjct: 380 RIHSRKIMPVNMSEEEKATLADNPEYMPSTVETKFFYLTCDLPPPPLYLDEYKESIIPQV 439
Query: 173 NLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNF 232
+L T+L KFN +EKEYKT++++ ++RFE+ LPPYLILY+KR KN F +EKNPTIVNF
Sbjct: 440 SLSTLLAKFNGTTEKEYKTHRDSVMRRFELRRLPPYLILYMKRIVKNIFTLEKNPTIVNF 499
Query: 233 PVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG--EPSNGTYRVHLY 290
P+K++DFG++L PE +A + KY T YDLVANIVHDG P +GT+R+HL
Sbjct: 500 PIKSIDFGELLDPECRAHH----------KY--TTYDLVANIVHDGPPTPGSGTHRIHLL 547
Query: 291 HKGIGKWYEIQDLHVTDILPQMITLTEAYIQI 322
H+G KW+E+QDLHVT++LPQMI L+E IQ+
Sbjct: 548 HRGTNKWFELQDLHVTEVLPQMIPLSETLIQV 579
>gi|402592787|gb|EJW86714.1| U4/U6.U5 tri-snRNP-associated protein 2 [Wuchereria bancrofti]
Length = 690
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/328 (57%), Positives = 230/328 (70%), Gaps = 26/328 (7%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRDYFLRE +Y +KRPPGD LL +RFGEL+RKLWNP+ FK+HVSPHEMLQ
Sbjct: 367 ALSHVPPLRDYFLREESYINIKRPPGDKLTLLPKRFGELIRKLWNPKAFKAHVSPHEMLQ 426
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
A VL S K+FQ T Q D +FL++ LNTLH ALNGT+K SSI+YK F G + TRK+
Sbjct: 427 ASVLCSNKKFQITRQGDAAEFLNFLLNTLHIALNGTRKTSSSIIYKIFRGRLHEFTRKVI 486
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
PVE E+ R+ LL T+EYKE + E PFLYLT DLP PL++DE+L+NIIPQV L +LTK
Sbjct: 487 PVETTEEARKTLLETDEYKEKKLEIPFLYLTLDLPAAPLYRDELLQNIIPQVPLSVLLTK 546
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKTY ENF+KRF++ LPPYLI+ KRF KN NVD
Sbjct: 547 FNGATEKEYKTYSENFMKRFQLVRLPPYLIITYKRFHKNQC--------------NVDLY 592
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
D L E++ + KY T YDLV+NIVHDG PS G+YR+ + H G KWYE+
Sbjct: 593 DCLAEEMRPLH----------KY--TTYDLVSNIVHDGPPSAGSYRIQILHNGTQKWYEL 640
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTT 328
+DLHV +ILPQMITL E+YIQI+ L T+
Sbjct: 641 EDLHVKEILPQMITLAESYIQIWRLNTS 668
>gi|256073829|ref|XP_002573230.1| family C19 non-peptidase homologue (C19 family) [Schistosoma
mansoni]
gi|360044721|emb|CCD82269.1| family C19 non-peptidase homologue (C19 family) [Schistosoma
mansoni]
Length = 577
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/343 (53%), Positives = 246/343 (71%), Gaps = 24/343 (6%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L H++PLR+YFL N+ + GD LLVQRF EL+RKLWNPRNFK+HVSPHE LQA
Sbjct: 201 LSHISPLRNYFLDIKNFENLPSVSGDQMMLLVQRFSELIRKLWNPRNFKTHVSPHEFLQA 260
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTK---------KKDSSIVYKTFLGSM 112
VVL S+K+FQ TEQ D I+FLSW +N + +AL K K SIV T G M
Sbjct: 261 VVLCSKKRFQITEQGDAIEFLSWLVNAIDKALRTKKIPCPKGAVNKTYKSIVSSTLRGKM 320
Query: 113 KVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQV 172
++ +RKI PV + ++ + L + EY T ++ F YLTCDLPPPPL+ DE ENIIPQV
Sbjct: 321 RMYSRKIMPVNMTDEEKASLADSPEYMTTVSDINFFYLTCDLPPPPLYLDEFKENIIPQV 380
Query: 173 NLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNF 232
+L T+L+KFN +EKEYKT++++ L+RFE+ LPPYLILY+KRF KN F +EKNPTIVNF
Sbjct: 381 SLATLLSKFNGVTEKEYKTHRDSTLRRFELRRLPPYLILYMKRFVKNIFTLEKNPTIVNF 440
Query: 233 PVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG--EPSNGTYRVHLY 290
P+K++DFG++L PE +AK+ +Y T YDLVAN+VHDG P +GT+R+HL
Sbjct: 441 PIKSIDFGELLAPEFRAKH----------RY--TTYDLVANVVHDGPPTPGSGTHRIHLV 488
Query: 291 HKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYEL-RTTPSPT 332
H+G GKW+E+QDLHV+++LPQMI L+E IQ++ + ++ P+P+
Sbjct: 489 HRGTGKWFELQDLHVSEVLPQMIPLSETLIQVWAVNKSIPNPS 531
>gi|449666515|ref|XP_002155067.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like, partial
[Hydra magnipapillata]
Length = 427
Score = 366 bits (940), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 193/334 (57%), Positives = 244/334 (73%), Gaps = 16/334 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL V P+R+YFLR +Y +KRPPGD F LVQRFGEL RK+WNPRNFKSHVSPHEMLQ
Sbjct: 97 ALVFVPPIRNYFLRVEHYNNIKRPPGDIMFPLVQRFGELTRKIWNPRNFKSHVSPHEMLQ 156
Query: 61 AVVLWSRKQFQFTE---QSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTR 117
+V+++S+ + FT+ DPI+FLSWF+N LH LNGTKK SS++YK F G MK R
Sbjct: 157 SVLIFSKLRHSFTKVNHYGDPIEFLSWFINALHFTLNGTKKSKSSVIYKAFRGEMKQFYR 216
Query: 118 KIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
K+P + ++++ ++LL +EEYKE E+ SPFLYLT D+P PLFKDE+ +N IPQV L +
Sbjct: 217 KLPATD-DKEIERKLLESEEYKEKESVSPFLYLTLDVPASPLFKDELEQNAIPQVPLINL 275
Query: 178 LTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNV 237
L KFN EKEYKTY E +K+F +T LP YLIL++KRF NTFFVEKNPT+VNFPVK +
Sbjct: 276 LQKFNGHQEKEYKTYNEISVKKFILTKLPKYLILFIKRFNNNTFFVEKNPTVVNFPVKGL 335
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSN--GTYRVHLYHKGIG 295
D + L + + V + T YDL+ANI HDGEP + GTYRVH++HKG
Sbjct: 336 DMKEFLLDDKE----------VLENNKDTCYDLIANISHDGEPGSGKGTYRVHVHHKGNK 385
Query: 296 KWYEIQDLHVTDILPQMITLTEAYIQIYELRTTP 329
+WYE+QDLHV DILP MITL+E+YIQI+EL+ P
Sbjct: 386 EWYELQDLHVKDILPPMITLSESYIQIWELQVKP 419
>gi|395853581|ref|XP_003799283.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Otolemur
garnettii]
Length = 479
Score = 363 bits (932), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 183/312 (58%), Positives = 223/312 (71%), Gaps = 38/312 (12%)
Query: 17 NYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQS 76
NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQAVVL S+K FQ T+Q+
Sbjct: 198 NYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQA 257
Query: 77 DPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTE 136
IV F GSM++ T+K+P +L + +++LL +
Sbjct: 258 --------------------------IVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHND 291
Query: 137 EYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENF 196
EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL KFN +EKEYKTYKENF
Sbjct: 292 EYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENF 351
Query: 197 LKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMY 256
LKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD + L+ E
Sbjct: 352 LKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEE---------- 401
Query: 257 DLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLT 316
V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+QDL VTDILPQMITL+
Sbjct: 402 --VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLS 459
Query: 317 EAYIQIYELRTT 328
EAYIQI++ R T
Sbjct: 460 EAYIQIWKRRDT 471
>gi|17533009|ref|NP_494298.1| Protein USP-39 [Caenorhabditis elegans]
gi|351061315|emb|CCD69090.1| Protein USP-39 [Caenorhabditis elegans]
Length = 602
Score = 361 bits (926), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 183/338 (54%), Positives = 236/338 (69%), Gaps = 14/338 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL V PLR++FL+E NY +KRPPGD LL QRFGEL+RKLWNPR ++HVSPHEMLQ
Sbjct: 273 ALSAVRPLRNWFLKESNYTSIKRPPGDKLTLLPQRFGELIRKLWNPRALRTHVSPHEMLQ 332
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVV+ S K+FQF +Q+D DF+ + L TLH ALNGT KK SI+ KTF G M+ +R++
Sbjct: 333 AVVVCSNKKFQFIKQNDAADFMLFLLTTLHSALNGTDKK-PSIISKTFRGRMRQYSRRVI 391
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P E ++ + L EY+E ESPFLYLT DLP PL++D L+NIIPQV L T+L K
Sbjct: 392 PAEDTDEEKYMKLRMPEYQEKVIESPFLYLTLDLPSAPLYRDVQLQNIIPQVPLSTLLEK 451
Query: 181 FNNESEKEYKTYKE-NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
F+ ++EKEY TY + N +KRFE+ LP +LI+ KRF KN +FVEKNPTIVNFP+ NVDF
Sbjct: 452 FDGKTEKEYPTYNDNNIMKRFELLQLPDFLIITYKRFQKNQWFVEKNPTIVNFPIANVDF 511
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYE 299
D L + +A + KY T YDLVAN+VH+G +G YR+ + H+G GKW+E
Sbjct: 512 YDCLAKDARANH----------KY--TTYDLVANVVHEGTFKDGNYRIQIVHEGSGKWFE 559
Query: 300 IQDLHVTDILPQMITLTEAYIQIYELRTTPSPTAMSEG 337
++DLHV D+LPQMI L E+YIQI+ L + +EG
Sbjct: 560 LEDLHVKDLLPQMIVLAESYIQIWRLNKEQTRDERAEG 597
>gi|268530552|ref|XP_002630402.1| Hypothetical protein CBG04341 [Caenorhabditis briggsae]
Length = 626
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 176/325 (54%), Positives = 236/325 (72%), Gaps = 13/325 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL V PLR++FL+E NY VKRPPGD LL QRFGEL+RKLWNPR ++HVSPHEMLQ
Sbjct: 294 ALSAVRPLRNWFLKESNYLAVKRPPGDKLTLLPQRFGELIRKLWNPRALRTHVSPHEMLQ 353
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVV+ S K+FQF +Q+D DF+ + L TLH ALNG++K++S I+ KTF G M+ +RK+
Sbjct: 354 AVVVCSNKKFQFIKQNDAYDFMLFLLTTLHAALNGSEKRES-IISKTFRGRMREYSRKVI 412
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P E E+ + R + +Y+E +E PFL+LT DLP PL++D L+NIIPQV L T+L K
Sbjct: 413 PAEDTEEEKYRKMHLPDYQEKVSEKPFLFLTLDLPAAPLYRDVQLQNIIPQVPLSTLLEK 472
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
F+ ++EKEY+TY +N +KR+E+ LP +LI+ KRF KN +FVEKNPTIVNFP+ NVD
Sbjct: 473 FDGKTEKEYRTYNDNIMKRYELLKLPEFLIISYKRFQKNQWFVEKNPTIVNFPIANVDLY 532
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L +V+A++ KY T YDLVAN+VH+G G YR+ + H+G GKW+E+
Sbjct: 533 ECLAEDVRAEH----------KY--TTYDLVANVVHEGTFETGNYRIQIVHQGSGKWFEL 580
Query: 301 QDLHVTDILPQMITLTEAYIQIYEL 325
+DLHV D+LPQMI L E+Y+QI+ L
Sbjct: 581 EDLHVKDMLPQMIVLAESYVQIWRL 605
>gi|341881288|gb|EGT37223.1| hypothetical protein CAEBREN_03753 [Caenorhabditis brenneri]
Length = 632
Score = 354 bits (908), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 175/325 (53%), Positives = 232/325 (71%), Gaps = 13/325 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL V PLR++FL E NY +KRPPGD LL QRFGEL+RKLWNPR ++HVSPHEMLQ
Sbjct: 300 ALSAVRPLRNWFLNEKNYLAIKRPPGDKLTLLPQRFGELIRKLWNPRALRTHVSPHEMLQ 359
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVV+ S+K+FQF +Q+D +FL++ L+TLHRALNG K+ +I+ KTF G M+ +RK+
Sbjct: 360 AVVVCSKKRFQFIKQNDAHEFLAFLLDTLHRALNG-KEDRQTIISKTFRGRMREYSRKVI 418
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P E E+ R EY+ T E+PF +LT DLP PL++D L+NIIPQV L T+L K
Sbjct: 419 PAEDTEEDRYIKERMPEYQPTIKETPFNFLTLDLPAAPLYRDVQLQNIIPQVPLSTLLEK 478
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
F+ +EKEY+TY +N +KR+E+ LP +LI+ KRF KN +FVEKNPTIVNFP+ NVD
Sbjct: 479 FDGRTEKEYRTYNDNIMKRYELLKLPEFLIISYKRFQKNQWFVEKNPTIVNFPIANVDLY 538
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L P+ V+A++ T YDLVAN+VH+G +G YR+ + H+G GKW+E+
Sbjct: 539 ECLAPD------------VRAEHTYTTYDLVANVVHEGTFEDGNYRIQIVHQGSGKWFEL 586
Query: 301 QDLHVTDILPQMITLTEAYIQIYEL 325
+DLHV D+LPQMI L E+YIQI+ L
Sbjct: 587 EDLHVKDMLPQMIVLAESYIQIWRL 611
>gi|308495270|ref|XP_003109823.1| hypothetical protein CRE_06606 [Caenorhabditis remanei]
gi|308244660|gb|EFO88612.1| hypothetical protein CRE_06606 [Caenorhabditis remanei]
Length = 634
Score = 354 bits (908), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 174/325 (53%), Positives = 232/325 (71%), Gaps = 13/325 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL V PLR++FL+E NY +KRPPGD LL QRFGEL+RKLWNPR ++HVSPHEMLQ
Sbjct: 303 ALSAVRPLRNWFLKESNYLAIKRPPGDKLTLLPQRFGELIRKLWNPRALRTHVSPHEMLQ 362
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVV+ S K++QF +Q+D DF+ + L TLH ALNG++K++S I+ KTF G M+ +RK+
Sbjct: 363 AVVVCSNKKYQFIKQNDAYDFMLFLLTTLHTALNGSEKRES-IISKTFRGKMREYSRKVI 421
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P E ++ + + +Y+E +E PFL+LT DLP PL++D L+NIIPQV L T+L K
Sbjct: 422 PAEDTDEEKYMKMRMPDYQERVSEKPFLFLTLDLPAAPLYRDVQLQNIIPQVPLSTLLEK 481
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN ++EKEY+TY +N +KR+E+ LP +LI+ KRF KN +FVEKNPTIVNFP+ NVD
Sbjct: 482 FNGKTEKEYRTYNDNIMKRYELLKLPEFLIISYKRFQKNQWFVEKNPTIVNFPIVNVDLY 541
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L + +A KY T YDLVAN+VH+G G YR+ + H+G GKWYE+
Sbjct: 542 ECLAEDARA----------DNKY--TTYDLVANVVHEGTFETGNYRIQIVHQGSGKWYEL 589
Query: 301 QDLHVTDILPQMITLTEAYIQIYEL 325
+DLHV D+LPQMI L E+YIQI+ L
Sbjct: 590 EDLHVKDMLPQMIVLAESYIQIWRL 614
>gi|341877318|gb|EGT33253.1| hypothetical protein CAEBREN_03779 [Caenorhabditis brenneri]
Length = 632
Score = 353 bits (906), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 175/325 (53%), Positives = 231/325 (71%), Gaps = 13/325 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL V PLR++FL E NY +KRPPGD LL QRFGEL+RKLWNPR ++HVSPHEMLQ
Sbjct: 300 ALSAVRPLRNWFLNEKNYLAIKRPPGDKLTLLPQRFGELIRKLWNPRALRTHVSPHEMLQ 359
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVV+ S+K+FQF +Q+D +FL++ L+TLHRALNG K+ +I+ KTF G M+ +RK+
Sbjct: 360 AVVVCSKKRFQFIKQNDAHEFLAFLLDTLHRALNG-KEDRQTIISKTFRGRMREYSRKVI 418
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P E E+ R EY+ T E+PF +LT DLP PL++D L+NIIPQV L T+L K
Sbjct: 419 PAEDTEEDRYIKERMPEYQPTIKETPFNFLTLDLPAAPLYRDVQLQNIIPQVPLSTLLEK 478
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
F+ +EKEY+TY +N +KR+E+ LP +LI+ KRF KN +FVEKNPTIVNFP+ NVD
Sbjct: 479 FDGRTEKEYRTYNDNIMKRYELLKLPEFLIISYKRFQKNQWFVEKNPTIVNFPIANVDLY 538
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ L P+ V+A++ T YDLVAN+VH+G G YR+ + H+G GKW+E+
Sbjct: 539 ECLAPD------------VRAEHTYTTYDLVANVVHEGTFEEGNYRIQIVHQGSGKWFEL 586
Query: 301 QDLHVTDILPQMITLTEAYIQIYEL 325
+DLHV D+LPQMI L E+YIQI+ L
Sbjct: 587 EDLHVKDMLPQMIVLAESYIQIWRL 611
>gi|326427425|gb|EGD72995.1| U4/U6.U5 tri-snRNP-associated protein 2 [Salpingoeca sp. ATCC
50818]
Length = 557
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/332 (51%), Positives = 220/332 (66%), Gaps = 26/332 (7%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L V P R++FL N R++ LVQ G+L+RK+ NP+ FK HVSPHE LQA
Sbjct: 222 LNRVAPFRNFFLDTTNTRRIRD-------RLVQTMGDLIRKVNNPKAFKGHVSPHEFLQA 274
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
+ S+KQF+ TEQSDPI LSW LNTL L+ K +++ TF G M V +RK+PP
Sbjct: 275 ITTSSKKQFRITEQSDPIRLLSWLLNTLDAKLS---KHGHTVISDTFKGKMLVTSRKLPP 331
Query: 122 VE-LEEKVRQRLL-LTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+ ++E R+ EEYK TE +++L DLPP PLF DE+ +N+IPQV L+ +L
Sbjct: 332 TQDMQEVANIRIDPNAEEYKPKTTEIEYMFLGLDLPPAPLFHDELQQNVIPQVALFELLN 391
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
KF+ S EYKTYK+ +K F + +LP YLI+++KRFTKNTFFVEKNPTIVNFPVKNVD
Sbjct: 392 KFDGVSSHEYKTYKDTVMKTFRLKTLPKYLIMHIKRFTKNTFFVEKNPTIVNFPVKNVDL 451
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG--EPSNGTYRVHLYHKGIGKW 297
D + E K ES +S +DL+ANIVHDG P GTYR H++HKG KW
Sbjct: 452 SDYIAEEDK---ESG---------DSYQFDLLANIVHDGLPGPGKGTYRAHVHHKGSKKW 499
Query: 298 YEIQDLHVTDILPQMITLTEAYIQIYELRTTP 329
+EIQDLHV D+LP+MITL+E+YIQ++E TP
Sbjct: 500 FEIQDLHVVDMLPEMITLSESYIQVWERSPTP 531
>gi|402891450|ref|XP_003908959.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 2 [Papio
anubis]
Length = 488
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 158/234 (67%), Positives = 186/234 (79%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV 234
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPI 475
>gi|403303110|ref|XP_003942187.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 488
Score = 313 bits (803), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 158/234 (67%), Positives = 186/234 (79%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV 234
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPI 475
>gi|332813584|ref|XP_003309127.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Pan
troglodytes]
Length = 488
Score = 313 bits (803), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 158/234 (67%), Positives = 186/234 (79%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV 234
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPI 475
>gi|376319201|ref|NP_001243655.1| U4/U6.U5 tri-snRNP-associated protein 2 isoform 2 [Homo sapiens]
gi|119619900|gb|EAW99494.1| ubiquitin specific peptidase 39, isoform CRA_c [Homo sapiens]
Length = 488
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 158/234 (67%), Positives = 186/234 (79%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV 234
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPI 475
>gi|410955235|ref|XP_003984262.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 2 [Felis
catus]
Length = 488
Score = 313 bits (802), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 158/234 (67%), Positives = 186/234 (79%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV 234
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPI 475
>gi|426223529|ref|XP_004005927.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 2 [Ovis
aries]
Length = 488
Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 158/234 (67%), Positives = 186/234 (79%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV 234
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPI 475
>gi|6841314|gb|AAF29010.1|AF161450_1 HSPC332 [Homo sapiens]
Length = 261
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 159/263 (60%), Positives = 198/263 (75%), Gaps = 12/263 (4%)
Query: 64 LWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVE 123
L S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P +
Sbjct: 1 LCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLPHPD 60
Query: 124 LEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNN 183
L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL KFN
Sbjct: 61 LPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNG 120
Query: 184 ESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDIL 243
+EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD + L
Sbjct: 121 ITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYL 180
Query: 244 TPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDL 303
+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+QDL
Sbjct: 181 SEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDL 228
Query: 304 HVTDILPQMITLTEAYIQIYELR 326
VTDILPQMITL+EAYIQI++ R
Sbjct: 229 QVTDILPQMITLSEAYIQIWKRR 251
>gi|193785486|dbj|BAG50852.1| unnamed protein product [Homo sapiens]
Length = 488
Score = 306 bits (784), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 155/234 (66%), Positives = 183/234 (78%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQR GE MRKLWNPRNFK+H SPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRSGEPMRKLWNPRNFKAHASPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV 234
FN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+
Sbjct: 422 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPI 475
>gi|4680681|gb|AAD27730.1|AF132955_1 CGI-21 protein [Homo sapiens]
Length = 324
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 154/233 (66%), Positives = 181/233 (77%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 81 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 140
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 141 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 200
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 201 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 260
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFP 233
FN +EKEYKTYKENFLKRF++T LPPYLI +K FTKN FFVEKNPT FP
Sbjct: 261 FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKIFTKNNFFVEKNPTSCQFP 313
>gi|320166703|gb|EFW43602.1| ubiquitin specific peptidase 39 [Capsaspora owczarzaki ATCC 30864]
Length = 492
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/347 (46%), Positives = 202/347 (58%), Gaps = 52/347 (14%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L + PLRD+ L K P L EL RK+WNPRNFK HVSPH MLQ+
Sbjct: 179 LNRIQPLRDFLLSSQADEACKTP-------LTSAASELFRKIWNPRNFKGHVSPHVMLQS 231
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
+ S K+F +Q+DP D LSW LNT H L GT++ SSI++K F GSMK+ +RK+P
Sbjct: 232 IASASSKRFTLAQQADPSDLLSWLLNTFHTDLGGTRRSGSSIIHKIFQGSMKMISRKMPA 291
Query: 122 VELEEKV----------RQRL---LLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENI 168
V EE+ R RL + +EY++ +ESPF++L+ DLPP PLFKDE +N
Sbjct: 292 VVDEEEASEEPAVHAAKRARLEEDVAEDEYEDKVSESPFMFLSLDLPPAPLFKDETGKNF 351
Query: 169 IPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPT 228
IPQ EYKT ++ F+KRF +TSLP YLIL V+RFTKN FF+EKN T
Sbjct: 352 IPQ----------------EYKTGRDLFMKRFILTSLPQYLILVVRRFTKNNFFLEKNAT 395
Query: 229 IVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG--EPSNGTYR 286
IVNFP++ +D D Y A ST YDLVANI HDG E GTY
Sbjct: 396 IVNFPLRGLDMRD--------------YVENAAAVGSTTYDLVANIYHDGSLEAGQGTYH 441
Query: 287 VHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTA 333
H+ HK WY +QDLHV ILPQ+I L EAYI +YE R T + ++
Sbjct: 442 AHVLHKATKSWYLMQDLHVNQILPQLIVLAEAYILVYERRNTATSSS 488
>gi|167516470|ref|XP_001742576.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779200|gb|EDQ92814.1| predicted protein [Monosiga brevicollis MX1]
Length = 620
Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 170/326 (52%), Positives = 222/326 (68%), Gaps = 20/326 (6%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSS-FLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L V LR++FL R+ P SS FLL +L+RK+ NPR FKSHVSPHE LQ
Sbjct: 306 LNRVPSLRNFFLDPEATRRMTDPLIVSSRFLLALALAKLIRKINNPRAFKSHVSPHEFLQ 365
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV S++QF+ TEQ+DP+D LSW LNTL R L+ K+ S+IV TF G M+V +RK+P
Sbjct: 366 AVNNGSKRQFRLTEQADPVDLLSWLLNTLQRKLS---KRGSNIVADTFQGRMRVTSRKLP 422
Query: 121 PV-ELEEKVRQRLL-LTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
P +++E R+ +EEY++ +E FL+L DLPPPPL++DE +NIIPQV L+ +L
Sbjct: 423 PPPDVQEVSGLRIDPNSEEYQDKVSEQKFLFLGLDLPPPPLYQDETRQNIIPQVPLFELL 482
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
+KF+ + EYKTYK+ +K F + +P YLIL+VKRFTKN FFVEKNPTIVNFPVK++D
Sbjct: 483 SKFDGSTSSEYKTYKDTIVKSFRLLDMPQYLILHVKRFTKNAFFVEKNPTIVNFPVKDID 542
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP--SNGTYRVHLYHKGIGK 296
F ++ E + S Y YDL+ NIVHDG P GTYR HLYHKG K
Sbjct: 543 FAGLVAEEFRDS--SKTY----------KYDLLCNIVHDGLPGAGKGTYRAHLYHKGCKK 590
Query: 297 WYEIQDLHVTDILPQMITLTEAYIQI 322
W+E+QDLHV D+LP+MITL+E+YIQ+
Sbjct: 591 WFEVQDLHVADVLPEMITLSESYIQV 616
>gi|384247659|gb|EIE21145.1| cysteine proteinase [Coccomyxa subellipsoidea C-169]
Length = 484
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 155/334 (46%), Positives = 205/334 (61%), Gaps = 28/334 (8%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL V PLR++FL NYA K LVQRFGEL+RK NPRNFK VSPHE +Q
Sbjct: 178 ALLRVLPLRNFFLLPENYASCKSQ-------LVQRFGELLRKACNPRNFKGQVSPHEFMQ 230
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV+ S K+F +QSDP+DFLSWFLN LH L G K+K +SI+ + F G +++
Sbjct: 231 AVMTASAKKFTIEKQSDPVDFLSWFLNMLHADLTGGKRKKASIISRCFQGELEIT----- 285
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
VE E ++ PFL L DLPP PL+KD + +NIIPQV ++ +L K
Sbjct: 286 -VEAGTGKAAVPNAAGEVRDVVERVPFLMLALDLPPAPLYKDALEKNIIPQVPIFELLRK 344
Query: 181 FNNES-EKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
F+ + K + +R+ +T LP YL+L++KRFTKN FF EKNPTIVNFPV+N++
Sbjct: 345 FDGGRIHDDIKAGR----RRYRLTRLPTYLVLHMKRFTKNNFFWEKNPTIVNFPVRNLEL 400
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYE 299
DI+ P K K + E++ YDLV NI+HDG+ GTYR H++ K WYE
Sbjct: 401 RDIV-PVPKGK---------TGEPEASKYDLVCNILHDGKAGEGTYRAHVHRKAEDAWYE 450
Query: 300 IQDLHVTDILPQMITLTEAYIQIYELRTTPSPTA 333
+ DL VTDIL QM+ L+E Y+Q+YEL+ P+ A
Sbjct: 451 VDDLRVTDILSQMVVLSETYMQVYELKRLPAKAA 484
>gi|449269014|gb|EMC79824.1| U4/U6.U5 tri-snRNP-associated protein 2 [Columba livia]
Length = 395
Score = 277 bits (708), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 155/300 (51%), Positives = 190/300 (63%), Gaps = 27/300 (9%)
Query: 47 RNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYK 106
R + H P A S++ Q D ++FLSWFLN LH AL GTK+K +IV
Sbjct: 86 RQVRWHHVPAGHRGAQQHQSQRLRQRRAAGDGVEFLSWFLNALHSALGGTKRKKKTIVTD 145
Query: 107 TFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
F GSM++ T+K+P +L + + +LL EY+E ES F+YLT DLP PL+KDE +
Sbjct: 146 VFQGSMRIFTKKLPHPDLPAEEKAQLLQNAEYQEMMVESTFMYLTLDLPTAPLYKDEKEQ 205
Query: 167 NIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKN 226
IIPQV L++IL KFN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKN
Sbjct: 206 LIIPQVPLFSILAKFNGVTEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKN 265
Query: 227 PTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSN---- 282
PTIVNFP+ NVD + L+ E V+A + +T YDL+ANIVHDG+PS
Sbjct: 266 PTIVNFPITNVDLREYLSEE------------VQAAHANTTYDLIANIVHDGKPSGLLPH 313
Query: 283 --------GTYRVH-LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE--LRTTPSP 331
R H G GKWYE+QDL VTDILPQMITL+EAYIQ E TPSP
Sbjct: 314 PRAAPRECPRPRCHPRVTPGTGKWYELQDLQVTDILPQMITLSEAYIQALEDPPGDTPSP 373
>gi|168000765|ref|XP_001753086.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695785|gb|EDQ82127.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 450
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/324 (47%), Positives = 208/324 (64%), Gaps = 36/324 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L VTPLR+YFL NY K P LVQRFGEL +K+W+ +NFK VSPHE LQ
Sbjct: 160 SLMRVTPLRNYFLLPENYKHCKSP-------LVQRFGELTKKIWHTKNFKGQVSPHEFLQ 212
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV++ S+K+F+ QSDP++F+SW LNTLH L GTKK++SS++YK F G ++V
Sbjct: 213 AVMVASKKRFRIGVQSDPVEFMSWLLNTLHTDLGGTKKRNSSVIYKCFQGELEVTKET-- 270
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+ K ++ PFL L DLPPPPLFKD + +NIIPQ+ L+ IL K
Sbjct: 271 ----------------QKKGDVSKMPFLMLGLDLPPPPLFKDVMEKNIIPQIPLFNILKK 314
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
F+ E+ E + R+ IT LP Y+IL+++RFTKN FF+EKNPT+VNFPVKN++
Sbjct: 315 FDGETVTEV-VRPQLARMRYRITRLPQYIILHMRRFTKNNFFMEKNPTLVNFPVKNLELK 373
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
D + P K+K + + T YDL+AN+VHDG+P G+YRV + K WYE+
Sbjct: 374 DYI-PLPKSK---------DGEKQRTKYDLIANLVHDGKPGEGSYRVFVQRKSDEMWYEM 423
Query: 301 QDLHVTDILPQMITLTEAYIQIYE 324
QDLHV + LPQM+ L+E Y+QIYE
Sbjct: 424 QDLHVNETLPQMVALSETYMQIYE 447
>gi|302829829|ref|XP_002946481.1| ubiquitin-specific protease 39 [Volvox carteri f. nagariensis]
gi|300268227|gb|EFJ52408.1| ubiquitin-specific protease 39 [Volvox carteri f. nagariensis]
Length = 474
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 152/323 (47%), Positives = 195/323 (60%), Gaps = 21/323 (6%)
Query: 5 VTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVL 64
+TPLRD+FL NY+ + P LVQRFGEL+RK+WN RNFK VSPHE +QAV
Sbjct: 170 ITPLRDFFLDPANYSDCRSP-------LVQRFGELLRKMWNTRNFKGQVSPHEFVQAVRN 222
Query: 65 WSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVEL 124
S+K+F Q DP++ SW LN LH L K K SI+ + G ++V T L
Sbjct: 223 ASKKRFTADTQCDPVELWSWLLNNLHLDLTRGKPKKPSIITQCLQGELEVTT-------L 275
Query: 125 EEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNE 184
R T TE PFL L +LPP PLFKD + +NIIPQV ++ I+ KF+ E
Sbjct: 276 AGTGRGTRAATSGEDVTE-RVPFLLLGLELPPAPLFKDVLEKNIIPQVPIFHIMRKFDGE 334
Query: 185 SEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDIL- 243
+ + +RF IT LP YL L+ +RFTKN FF+EKNPT+VNFPVK+++ DIL
Sbjct: 335 TITDDIRAGR---RRFRITRLPRYLALHYRRFTKNNFFIEKNPTLVNFPVKSLELRDILP 391
Query: 244 TPEVKAKYESTMYDLVKAKY--ESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQ 301
PE A A S+ YDLVAN+VHDG+ +GTYRVH++ K WYE+Q
Sbjct: 392 LPEFPAAAGGAAAGAPDAAAYGSSSKYDLVANLVHDGKADSGTYRVHVHRKVEDIWYEVQ 451
Query: 302 DLHVTDILPQMITLTEAYIQIYE 324
DL V DILPQM+ L+EAY Q++E
Sbjct: 452 DLAVQDILPQMVALSEAYFQVFE 474
>gi|330842890|ref|XP_003293401.1| hypothetical protein DICPUDRAFT_41968 [Dictyostelium purpureum]
gi|325076271|gb|EGC30071.1| hypothetical protein DICPUDRAFT_41968 [Dictyostelium purpureum]
Length = 472
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 146/333 (43%), Positives = 204/333 (61%), Gaps = 37/333 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L + +RDY L N + K +LVQ F EL+RK+WNPRNFK VSPHE+LQ
Sbjct: 165 SLARIPTIRDYLLDFNNISNCKS-------ILVQSFSELLRKIWNPRNFKPQVSPHELLQ 217
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
A+ S+K+F E +DP++FL WFLNTLHR L GTK+ +SSI+YK G ++V T K
Sbjct: 218 AIQNASQKKFNIRETADPLEFLQWFLNTLHRDLGGTKQPNSSIIYKALSGQIEVTTEK-- 275
Query: 121 PVE---------LEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQ 171
P++ E K + +Y + +PFL+LT DLPP +FKD ++IIPQ
Sbjct: 276 PIKNDDDSDDSDSEMKDGNKSKKPVQYSTSTMRNPFLFLTLDLPPKQIFKDSQEKSIIPQ 335
Query: 172 VNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVN 231
V L+ +L+K++ + T LK+++I LP YLIL +KRF+KN FFVEK PTIVN
Sbjct: 336 VPLFNLLSKYDGNTT---TTMPNGDLKKYKIIQLPKYLILCIKRFSKNNFFVEKEPTIVN 392
Query: 232 FPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYH 291
FP+KN+D L P D KAK Y+L+A I H+GEP++G Y V++ +
Sbjct: 393 FPIKNLDLSSYLPP-----------DASKAK-----YNLLATIKHEGEPNSGNYSVYILN 436
Query: 292 KGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
KG KW+E+QDL + + +PQ+I ++E Y IYE
Sbjct: 437 KGKDKWFEMQDLTIKETMPQLIAVSECYFLIYE 469
>gi|357110906|ref|XP_003557256.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like
[Brachypodium distachyon]
Length = 546
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 160/333 (48%), Positives = 209/333 (62%), Gaps = 31/333 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L +TPLR++FL NY K P LV RFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 233 SLMRITPLRNFFLIPENYQHSKSP-------LVHRFGELTRKIWHARNFKGQVSPHEFLQ 285
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKV----KT 116
AV+ S K+FQ QSDP++F+SW LNTLH L +K+K+ SI+Y F G ++V
Sbjct: 286 AVMKASEKKFQIGVQSDPVEFMSWLLNTLHAKLRSSKRKNRSIIYDCFQGELEVVKEIHR 345
Query: 117 RKIPPVELEEKVRQRLLLTEEYKETETES-PFLYLTCDLPPPPLFKDEVLENIIPQVNLY 175
+ I E + ++ T + TET PFL L DLPPPPLFKD + +NIIPQV L+
Sbjct: 346 KHIVGDEQNGESSSQVETTSDGMVTETSRVPFLMLGLDLPPPPLFKDAMEKNIIPQVPLF 405
Query: 176 TILTKFNNESEKEYKTYKENFLK-RFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV 234
IL KF+ E+ E + + + R+ + LP Y+IL+++RFTKN FFVEKNPT+VNFPV
Sbjct: 406 NILKKFDGEAVTE--VVRPSIARMRYRVIRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 463
Query: 235 KNVDFGDIL---TPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYH 291
KN++ D + P+ K K S YDL+ANIVHDG+P G YRV +
Sbjct: 464 KNLELKDYIPLPKPKEKEKLRSK-------------YDLIANIVHDGKPGEGCYRVFVQR 510
Query: 292 KGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
K WYE+QDLHVT+ LPQM+ L+EAY+QIYE
Sbjct: 511 KSEEAWYEMQDLHVTETLPQMVALSEAYMQIYE 543
>gi|326495966|dbj|BAJ90605.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 553
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 158/330 (47%), Positives = 209/330 (63%), Gaps = 25/330 (7%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L +TPLR++FL NY K P LV RFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 240 SLMRITPLRNFFLIPENYQHSKSP-------LVHRFGELTRKIWHARNFKGQVSPHEFLQ 292
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKV----KT 116
AV+ S K+FQ QSDP++F+SW LNTLH L +KKK+ SI+Y F G ++V
Sbjct: 293 AVMKASEKKFQIGVQSDPVEFMSWLLNTLHAKLRSSKKKNRSIIYDCFQGELEVVKEIHR 352
Query: 117 RKIPPVELEEKVRQRLLLTEEYKETETES-PFLYLTCDLPPPPLFKDEVLENIIPQVNLY 175
+ + E + ++ T + T+T PFL L DLPPPPLFKD + +NIIPQV L+
Sbjct: 353 KHLVDDEQNGEASSQVETTSDGMVTQTSRVPFLMLGLDLPPPPLFKDAMEKNIIPQVPLF 412
Query: 176 TILTKFNNESEKEYKTYKENFLK-RFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV 234
IL KF+ E+ E + + + R+ + LP Y+IL+++RFTKN FFVEKNPT+VNFPV
Sbjct: 413 NILKKFDGETVTE--VVRPSIARMRYRVIRLPKYMILHMRRFTKNNFFVEKNPTLVNFPV 470
Query: 235 KNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGI 294
KN++ D + P K K + + YDL+ANIVHDG+P G YRV + K
Sbjct: 471 KNLELKDYI-PLPKPKENEKL---------RSKYDLIANIVHDGKPGEGCYRVFVQRKSE 520
Query: 295 GKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
WYE+QDLHVT+ LPQM+ L+EAY+QIYE
Sbjct: 521 EAWYEMQDLHVTETLPQMVALSEAYMQIYE 550
>gi|393218241|gb|EJD03729.1| spindle pole body protein [Fomitiporia mediterranea MF3/22]
Length = 536
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/342 (43%), Positives = 204/342 (59%), Gaps = 39/342 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL H+ PLRDY L G L++RF L +KLWNPR FK+ VSPHE LQ
Sbjct: 212 ALTHIPPLRDYLLLSAF--------GGKESELLKRFAGLAKKLWNPRLFKNQVSPHEFLQ 263
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK-I 119
V S +F+ EQ DP +FL W LN LH+ + G+KKK+SSI+Y TF G ++++T++ I
Sbjct: 264 EVGRASTGKFRLEEQGDPTEFLGWLLNRLHKDMGGSKKKNSSIIYSTFQGELRMETQQVI 323
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
E E R + + E K T SPFL+L+ DLPPPPLF+D V +NIIPQV+L ++L+
Sbjct: 324 VKPEGESSHRPQFDIDRETK--TTTSPFLFLSVDLPPPPLFQDSVEKNIIPQVSLASVLS 381
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
K++ + +EY L+RF+ LP YLIL+ KRFTKN F EKNPTIVNFP++ VDF
Sbjct: 382 KYDGRTTQEYLGQ----LRRFKCQRLPRYLILHFKRFTKNIFVEEKNPTIVNFPLRGVDF 437
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG------EPSNGTYRVHLYHKG 293
+ L + ST+YDL+AN++H+ + N ++VHL
Sbjct: 438 SEYLD--------------APPNHPSTVYDLIANVIHESVAGTTRDKVNTAWKVHLRAGS 483
Query: 294 IG----KWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSP 331
G KWY+IQDL V ++ +MI L E IQI+E R P+P
Sbjct: 484 GGGDNEKWYQIQDLIVEEVRKEMIFLGETVIQIWERRDQPTP 525
>gi|449443550|ref|XP_004139540.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Cucumis
sativus]
Length = 550
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 165/335 (49%), Positives = 212/335 (63%), Gaps = 37/335 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L VTPLR++FL NY + P LV RFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 239 SLMRVTPLRNFFLIPANYQHCRSP-------LVHRFGELTRKIWHARNFKGQVSPHEFLQ 291
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV+ S+K+F+ QSDP++F+SWFLNTLH L TKK SSI+Y+ F G ++V ++I
Sbjct: 292 AVMKASKKRFRIGAQSDPVEFMSWFLNTLHSELRITKKS-SSIIYECFQGELEV-VKEIH 349
Query: 121 PVELEEKVRQRLLLTEEYKETETES--------PFLYLTCDLPPPPLFKDEVLENIIPQV 172
L EK E+ TE S PFL L DLPPPPLFKD + +NIIPQV
Sbjct: 350 SKALIEKKENG---EEQDAGTEGSSVAMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQV 406
Query: 173 NLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNF 232
L+ IL KF+ E+ E + + R+ +T LP YLIL+++RFTKN FFVEKNPT+VNF
Sbjct: 407 PLFNILKKFDGETITEVVRPRIARM-RYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNF 465
Query: 233 PVKNVDFGDIL---TPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
PVKN++ D + TP+ K S YDL+ANIVHDG+P+ G YRV +
Sbjct: 466 PVKNLELKDYIPLPTPKDNDKLRSK-------------YDLIANIVHDGKPNEGYYRVFV 512
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
K WYE+QDLHV++ LPQM+ L+EAY+QIYE
Sbjct: 513 QRKSEELWYEMQDLHVSETLPQMVALSEAYMQIYE 547
>gi|392597787|gb|EIW87109.1| cysteine proteinase [Coniophora puteana RWD-64-598 SS2]
Length = 531
Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 148/350 (42%), Positives = 205/350 (58%), Gaps = 42/350 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL H+ PLRDY L + RP G + LV+RF L +KLWNPR FKS VSPHE LQ
Sbjct: 201 ALLHIPPLRDYLL-------LTRPTGKET-ELVRRFAVLAKKLWNPRLFKSQVSPHEFLQ 252
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKI- 119
V S +F+ Q DP++FL W LN LH+ + GT+KK+SSI++ TF G ++ +T+++
Sbjct: 253 EVNRASTGRFRLENQGDPVEFLGWLLNRLHQDMGGTRKKNSSIIFSTFQGELRAQTQQVL 312
Query: 120 --PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
P EK R + + + T SPFL+L DLPPPPLF+D V +NIIPQVN++++
Sbjct: 313 VRPDTGTNEK--PRFDIARDIR--TTVSPFLFLAVDLPPPPLFQDAVEKNIIPQVNIHSV 368
Query: 178 LTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNV 237
L K++ E+ +E +KR++ LPPY+I++ KRFTKN F EKNPTIVNFP++ +
Sbjct: 369 LAKYDGETTQELGGQ----VKRYKCQRLPPYIIIHFKRFTKNAFVEEKNPTIVNFPLRGL 424
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNG------TYRVHLYH 291
DF D L A + T+YDL+AN+ H+ T++VHL
Sbjct: 425 DFRDYLDAPSTAPGD-------------TVYDLIANVTHESVAGTARDLAATTWKVHLRA 471
Query: 292 KGIG----KWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTAMSEG 337
G G KW++IQDL V + +MI L E +QI+E R A S G
Sbjct: 472 AGGGGDTEKWFQIQDLIVEETRKEMIFLGETVLQIWERRRQAPTLATSNG 521
>gi|449520261|ref|XP_004167152.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Cucumis
sativus]
Length = 550
Score = 263 bits (672), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 164/335 (48%), Positives = 212/335 (63%), Gaps = 37/335 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L VTPLR++FL NY + P LV RFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 239 SLMRVTPLRNFFLIPANYQHCRSP-------LVHRFGELTRKIWHARNFKGQVSPHEFLQ 291
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
A++ S+K+F+ QSDP++F+SWFLNTLH L TKK SSI+Y+ F G ++V ++I
Sbjct: 292 AIMKASKKRFRIGAQSDPVEFMSWFLNTLHSELRITKKS-SSIIYECFQGELEV-VKEIH 349
Query: 121 PVELEEKVRQRLLLTEEYKETETES--------PFLYLTCDLPPPPLFKDEVLENIIPQV 172
L EK E+ TE S PFL L DLPPPPLFKD + +NIIPQV
Sbjct: 350 SKALIEKKENG---EEQDAGTEGSSVAMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQV 406
Query: 173 NLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNF 232
L+ IL KF+ E+ E + + R+ +T LP YLIL+++RFTKN FFVEKNPT+VNF
Sbjct: 407 PLFNILKKFDGETITEVVRPRIARM-RYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNF 465
Query: 233 PVKNVDFGDIL---TPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
PVKN++ D + TP+ K S YDL+ANIVHDG+P+ G YRV +
Sbjct: 466 PVKNLELKDYIPLPTPKDNDKLRSK-------------YDLIANIVHDGKPNEGYYRVFV 512
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
K WYE+QDLHV++ LPQM+ L+EAY+QIYE
Sbjct: 513 QRKSEELWYEMQDLHVSETLPQMVALSEAYMQIYE 547
>gi|242093968|ref|XP_002437474.1| hypothetical protein SORBIDRAFT_10g027800 [Sorghum bicolor]
gi|241915697|gb|EER88841.1| hypothetical protein SORBIDRAFT_10g027800 [Sorghum bicolor]
Length = 549
Score = 263 bits (672), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 161/335 (48%), Positives = 211/335 (62%), Gaps = 31/335 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L VTPLR++FL NY K P LV RFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 232 SLMRVTPLRNFFLIPENYQHRKSP-------LVHRFGELTRKIWHARNFKGQVSPHEFLQ 284
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV+ S K+FQ QSDP++F+SW LNTLH L +KKK+ SI++ F G ++V +++
Sbjct: 285 AVMKASDKRFQIGVQSDPVEFMSWLLNTLHAKLKSSKKKNRSIIHDCFQGELEV-VKEVH 343
Query: 121 PVELEEKVRQ---------RLLLTEEYKETETES-PFLYLTCDLPPPPLFKDEVLENIIP 170
+ EK ++ T + TET PFL L DLPPPPLFKD + +NIIP
Sbjct: 344 RKHIMEKREDGDEPNGEAGSVVGTADGIVTETSKVPFLMLGLDLPPPPLFKDAMEKNIIP 403
Query: 171 QVNLYTILTKFNNESEKEYKTYKENFLK-RFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
QV L+ IL KF+ E+ E + + + R+ +T LP YLIL+++RFTKN FFVEKNPT+
Sbjct: 404 QVPLFNILKKFDGETVTE--VVRPSIARMRYRVTRLPKYLILHMRRFTKNNFFVEKNPTL 461
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFPVKN++ D + P K K + + YDL+ANIVHDG+P G YRV +
Sbjct: 462 VNFPVKNLELKDYI-PLPKPKENHKL---------RSKYDLIANIVHDGKPGEGCYRVFV 511
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
K WYE+QDLHVT+ LPQM+ L+E Y+QIYE
Sbjct: 512 QRKSEEAWYEMQDLHVTETLPQMVALSETYMQIYE 546
>gi|413934601|gb|AFW69152.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 551
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 161/335 (48%), Positives = 209/335 (62%), Gaps = 31/335 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L VTPLR++FL NY K P LV RFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 234 SLMRVTPLRNFFLIPENYQHSKSP-------LVHRFGELTRKIWHARNFKGQVSPHEFLQ 286
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV+ S K+FQ QSDP++F++W LNTLH L +KKK+ SI++ F G ++V +++
Sbjct: 287 AVMKASDKKFQIGVQSDPVEFMTWLLNTLHAKLKSSKKKNRSIIHDCFQGELEV-VKEVH 345
Query: 121 PVELEEKVRQRLLLTEEYKE---------TETES-PFLYLTCDLPPPPLFKDEVLENIIP 170
+ EK L E TET PFL L DLPPPPLFKD + +NIIP
Sbjct: 346 RKHIMEKREDGGELNGEAGSVVGTADGIVTETSKVPFLMLGLDLPPPPLFKDAMEKNIIP 405
Query: 171 QVNLYTILTKFNNESEKEYKTYKENFLK-RFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
QV L+ IL KF+ E+ E + + + R+ +T LP YLIL+++RFTKN FFVEKNPT+
Sbjct: 406 QVPLFNILKKFDGETVTE--VVRPSIARMRYRVTRLPKYLILHMRRFTKNNFFVEKNPTL 463
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFPVKN++ D + P K K + + YDL+ANIVHDG+P G YRV +
Sbjct: 464 VNFPVKNLELKDYI-PLPKPKENHKL---------RSKYDLIANIVHDGKPGEGCYRVFV 513
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
K WYE+QDLHVT+ LPQM+ L+E Y+QIYE
Sbjct: 514 QRKSEEAWYEMQDLHVTETLPQMVALSETYMQIYE 548
>gi|403357602|gb|EJY78428.1| U4/U6.U5 tri-snRNP-associated protein 2 [Oxytricha trifallax]
Length = 559
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/345 (41%), Positives = 212/345 (61%), Gaps = 24/345 (6%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+LC V PLRDY L N D LLV +F EL++K+WNP+NFK HVSPHE+LQ
Sbjct: 190 SLCRVKPLRDYCLF-YNIHSENLSMADQKHLLVVKFAELIKKIWNPKNFKGHVSPHELLQ 248
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK----KDSSIVYKTFLGSMKVKT 116
A+ L S+K+F+ EQ DPI LSW LNT + L+ +K K +++ KTF G +++ +
Sbjct: 249 AISLASQKRFKIGEQKDPIQLLSWLLNTFNEDLHSQQKQKKLKGLNMIEKTFQGELEISS 308
Query: 117 RKIPPVELEEKVRQRLLLTE-------EYKETETESPFLYLTCDLPPPPLFKDEVLENII 169
IP + + +L +++ +Y+ ++ F +L DLP PLFK++ I
Sbjct: 309 L-IPKGKQDANFLNKLAVSKTNMDTDVQYEMKNQKTKFFFLALDLPTIPLFKEQNQLAAI 367
Query: 170 PQVNLYTILTKFNNES--EKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNP 227
PQ+ L +L K++ +S E+ K K+F I SLP YLI++VKRF KN +F EKNP
Sbjct: 368 PQIALMQLLKKYDGKSFIEEPVTAIK----KKFRILSLPKYLIIHVKRFNKNDYFTEKNP 423
Query: 228 TIVNFPVKNVDFGDILTPEVKAKYE----STMYDLVKAKYESTMYDLVANIVHDGEPSNG 283
TIVNFP+KN+D + L + +++ +T+ D K E+ YDL+ANI+H+G+ NG
Sbjct: 424 TIVNFPIKNLDLSEYLWSPIAQQHQNDGSNTLNDAQPTK-ETYKYDLIANIIHEGKHDNG 482
Query: 284 TYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTT 328
YRV ++HK +WY+IQDLHV I+PQ + ++E YI ++E ++T
Sbjct: 483 QYRVQIHHKPTDEWYDIQDLHVNQIMPQQVVVSECYILVFERQST 527
>gi|403343237|gb|EJY70942.1| U4/U6.U5 tri-snRNP-associated protein 2 [Oxytricha trifallax]
Length = 497
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/345 (41%), Positives = 212/345 (61%), Gaps = 24/345 (6%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+LC V PLRDY L N D LLV +F EL++K+WNP+NFK HVSPHE+LQ
Sbjct: 128 SLCRVKPLRDYCLF-YNIHSENLSMADQKHLLVVKFAELIKKIWNPKNFKGHVSPHELLQ 186
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK----KDSSIVYKTFLGSMKVKT 116
A+ L S+K+F+ EQ DPI LSW LNT + L+ +K K +++ KTF G +++ +
Sbjct: 187 AISLASQKRFKIGEQKDPIQLLSWLLNTFNEDLHSQQKQKKLKGLNMIEKTFQGELEISS 246
Query: 117 RKIPPVELEEKVRQRLLLTE-------EYKETETESPFLYLTCDLPPPPLFKDEVLENII 169
IP + + +L +++ +Y+ ++ F +L DLP PLFK++ I
Sbjct: 247 L-IPKGKQDANFLNKLAVSKTNMDTDVQYEMKNQKTKFFFLALDLPTIPLFKEQNQLAAI 305
Query: 170 PQVNLYTILTKFNNES--EKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNP 227
PQ+ L +L K++ +S E+ K K+F I SLP YLI++VKRF KN +F EKNP
Sbjct: 306 PQIALMQLLKKYDGKSFIEEPVTAIK----KKFRILSLPKYLIIHVKRFNKNDYFTEKNP 361
Query: 228 TIVNFPVKNVDFGDILTPEVKAKYE----STMYDLVKAKYESTMYDLVANIVHDGEPSNG 283
TIVNFP+KN+D + L + +++ +T+ D K E+ YDL+ANI+H+G+ NG
Sbjct: 362 TIVNFPIKNLDLSEYLWSPIAQQHQNDGSNTLNDAQPTK-ETYKYDLIANIIHEGKHDNG 420
Query: 284 TYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTT 328
YRV ++HK +WY+IQDLHV I+PQ + ++E YI ++E ++T
Sbjct: 421 QYRVQIHHKPTDEWYDIQDLHVNQIMPQQVVVSECYILVFERQST 465
>gi|313228455|emb|CBY23606.1| unnamed protein product [Oikopleura dioica]
Length = 582
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/336 (44%), Positives = 206/336 (61%), Gaps = 33/336 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGD---SSFLLVQRFGELMRKLWNPRNFKSHVSPHE 57
L V RD+FL V+ G+ S ++++R GEL+RKLW +++ HVSPHE
Sbjct: 230 GLAQVPKFRDHFL-------VRTFAGNKQTSDRIMLRRLGELLRKLWKNHHYRPHVSPHE 282
Query: 58 MLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNG-TKKKDSSIVYKTFLGSMKVKT 116
LQ+VV+ S+ +FQFTE+ + +FL+WFLN+L + + K K+SS + F G ++V +
Sbjct: 283 FLQSVVIESKGRFQFTERGNAGEFLTWFLNSLDKVMRKYEKNKESSFIRNIFEGEIEVTS 342
Query: 117 RKIPPVELEEKVRQRLLLTEEYK--ETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNL 174
R+IP EL E+ +++LL +YK F++L DLP PLF D + IPQV++
Sbjct: 343 RRIPNPELSEEEKRKLLQLPKYKFEGVSERQKFMFLLLDLPAKPLFVDPHKQIPIPQVHI 402
Query: 175 YTILTKFNNESEKEYKTYKEN----FLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIV 230
T+L KFN + EKEYK E+ LKRF + LP LI ++RFTKN FFVEKNPTIV
Sbjct: 403 NTLLEKFNGQQEKEYKLKGEDRRDPLLKRFRVVRLPDVLIFQIQRFTKNNFFVEKNPTIV 462
Query: 231 NFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLY 290
+PV ++D G Y L E ++DLVANIVHDGEP +G+YR+H+
Sbjct: 463 QYPVSSLDMGP--------------YCLEDDGQE--IFDLVANIVHDGEPKDGSYRIHVN 506
Query: 291 HKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
HK W EIQDL V+D LP+MI L+EA+IQI+ R
Sbjct: 507 HKLTNMWKEIQDLVVSDALPEMIPLSEAFIQIWVRR 542
>gi|66828951|ref|XP_647829.1| SAP DNA-binding domain-containing protein [Dictyostelium discoideum
AX4]
gi|60470085|gb|EAL68066.1| SAP DNA-binding domain-containing protein [Dictyostelium discoideum
AX4]
Length = 718
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 135/331 (40%), Positives = 203/331 (61%), Gaps = 33/331 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L + +R++ L N K P LV EL+RK+WNP+NFK+ VSPHE+LQ
Sbjct: 411 SLARIPTIRNFLLNVDNIKTNKSP-------LVLTLSELLRKIWNPKNFKAQVSPHELLQ 463
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
A+ S+K+F E SDP+DFL WFLNTLH+ L GTK+ +SSI+YK F G +++ T K
Sbjct: 464 AIQNSSQKRFNIRESSDPLDFLPWFLNTLHKDLGGTKQPNSSIIYKAFSGEIQITTDKPI 523
Query: 121 P-------VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVN 173
P + + + L +Y + ++ PFL+LT DLPP P+FKD+ ++IIPQ+
Sbjct: 524 PKSVDDDSSDYDNDDGENKKLKTKYSNSTSKQPFLFLTLDLPPKPIFKDDQDKSIIPQIP 583
Query: 174 LYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFP 233
L+ +L+K++ +E +K+++I SLP YLIL VKRF+KN FF+EK PTIVNFP
Sbjct: 584 LFNLLSKYDGTTE---TILPNGEIKKYKILSLPNYLILCVKRFSKNNFFIEKEPTIVNFP 640
Query: 234 VKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKG 293
+KN+D D L P + ++L+A I H+G+P++G + V++ HKG
Sbjct: 641 IKNLDLNDYLPP----------------GSPKSKFNLLATIKHEGDPNSGNFSVYINHKG 684
Query: 294 IGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
KW+E+ DL + + +PQ+I ++E + IYE
Sbjct: 685 NDKWFEMHDLSIKETMPQLIAVSECFFLIYE 715
>gi|402220082|gb|EJU00155.1| hypothetical protein DACRYDRAFT_55351 [Dacryopinax sp. DJM-731 SS1]
Length = 485
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 150/349 (42%), Positives = 209/349 (59%), Gaps = 56/349 (16%)
Query: 1 ALCHVTPLRDYFL-REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
AL HV+PLRDY L E+N P S L +RF L +KLWNPR FK+ VSPHE L
Sbjct: 171 ALLHVSPLRDYLLLTELN-------PKYSE--LAKRFATLAKKLWNPRLFKAQVSPHEFL 221
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKI 119
Q V S +F+ TEQ DP++F+SW LN LH+ L GTKK+DSS++Y TF G +++ T++I
Sbjct: 222 QEVTRASAGKFKITEQGDPVEFMSWLLNILHKGLGGTKKRDSSVIYHTFQGEVRLDTQQI 281
Query: 120 PPVELEEKVRQRLLLTEEYKETE---TESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYT 176
V+ L +E TE T SPFL+L+ DLPPPP+F+D + +NIIPQV L +
Sbjct: 282 -------IVKSDRLGSERPVNTEIKSTSSPFLFLSLDLPPPPIFQDSIEKNIIPQVTLAS 334
Query: 177 ILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKN 236
+L K+N + +E+ L+R++ LPPY+IL+ KRFTKN F EKNPTIVNFP++
Sbjct: 335 VLAKYNGSTTQEFAGQ----LRRYKCQRLPPYIILHFKRFTKNNFVEEKNPTIVNFPLRG 390
Query: 237 VDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG------EPSNGTYRVHL- 289
VDF + L + +ST+YDLVAN+ H+ + N ++V L
Sbjct: 391 VDFREYLDNPIPG--------------QSTVYDLVANVTHESTAGTARDKENTVWKVQLR 436
Query: 290 ----------YHKGIG-KWYEIQDLHVTDILPQMITLTEAYIQIYELRT 327
+G G KW+++QDL V ++ +MI L+E +QI+E RT
Sbjct: 437 AGKAVPGATGAREGEGEKWFQLQDLIVEEVRREMIFLSETVLQIWERRT 485
>gi|224137344|ref|XP_002322534.1| predicted protein [Populus trichocarpa]
gi|222867164|gb|EEF04295.1| predicted protein [Populus trichocarpa]
Length = 530
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 157/325 (48%), Positives = 211/325 (64%), Gaps = 32/325 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L VTPLR++FL NY K P LVQR+GEL RK+W+ RNFK VSPHE LQ
Sbjct: 234 SLMRVTPLRNFFLIPENYQHCKSP-------LVQRYGELTRKIWHARNFKGQVSPHEFLQ 286
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV+ S+K+F+ +QSDP++F++W LNTLH L T KK++SI+Y+ F G ++V ++IP
Sbjct: 287 AVMKASKKRFRIGQQSDPVEFMAWLLNTLHTNLR-TLKKNNSIIYECFQGELEV-VKEIP 344
Query: 121 PVELEEKVRQRLLLTEEYKETETES-PFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+ EK KE ET PFL L DLPPPPLFKD + +NIIPQV L+ IL
Sbjct: 345 NKAITEK-----------KENETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILK 393
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
KF+ ES E + +K + + LP YLIL+++RF KN FF+EKNPT+VNFPVKN++
Sbjct: 394 KFDGESVTEVVRPRVARMK-YRVIRLPQYLILHMQRFKKNNFFIEKNPTLVNFPVKNLEL 452
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYE 299
D + + + E + YDL+A+IVHDG+P+ G YRV + K WYE
Sbjct: 453 KDFIPLPMPKENERL----------RSKYDLIADIVHDGKPNEGFYRVFVQRKSEELWYE 502
Query: 300 IQDLHVTDILPQMITLTEAYIQIYE 324
+QDLHV++ LPQM+ L+EAY+QIYE
Sbjct: 503 MQDLHVSETLPQMVALSEAYLQIYE 527
>gi|194706300|gb|ACF87234.1| unknown [Zea mays]
Length = 316
Score = 260 bits (664), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 160/331 (48%), Positives = 207/331 (62%), Gaps = 31/331 (9%)
Query: 5 VTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVL 64
VTPLR++FL NY K P LV RFGEL RK+W+ RNFK VSPHE LQAV+
Sbjct: 3 VTPLRNFFLIPENYQHSKSP-------LVHRFGELTRKIWHARNFKGQVSPHEFLQAVMK 55
Query: 65 WSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVEL 124
S K+FQ QSDP++F++W LNTLH L +KKK+ SI++ F G ++V +++ +
Sbjct: 56 ASDKKFQIGVQSDPVEFMTWLLNTLHAKLKSSKKKNRSIIHDCFQGELEV-VKEVHRKHI 114
Query: 125 EEKVRQRLLLTEEYKE---------TETES-PFLYLTCDLPPPPLFKDEVLENIIPQVNL 174
EK L E TET PFL L DLPPPPLFKD + +NIIPQV L
Sbjct: 115 MEKREDGGELNGEAGSVVGTADGIVTETSKVPFLMLGLDLPPPPLFKDAMEKNIIPQVPL 174
Query: 175 YTILTKFNNESEKEYKTYKENFLK-RFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFP 233
+ IL KF+ E+ E + + + R+ +T LP YLIL+++RFTKN FFVEKNPT+VNFP
Sbjct: 175 FNILKKFDGETVTE--VVRPSIARMRYRVTRLPKYLILHMRRFTKNNFFVEKNPTLVNFP 232
Query: 234 VKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKG 293
VKN++ D + P K K + + YDL+ANIVHDG+P G YRV + K
Sbjct: 233 VKNLELKDYI-PLPKPKENHKL---------RSKYDLIANIVHDGKPGEGCYRVFVQRKS 282
Query: 294 IGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
WYE+QDLHVT+ LPQM+ L+E Y+QIYE
Sbjct: 283 EEAWYEMQDLHVTETLPQMVALSETYMQIYE 313
>gi|307102449|gb|EFN50724.1| hypothetical protein CHLNCDRAFT_33393 [Chlorella variabilis]
Length = 513
Score = 260 bits (664), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 146/347 (42%), Positives = 199/347 (57%), Gaps = 53/347 (15%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL V P+RD+FLR NYA + LLVQRFGEL+RK+WNPR FK VSPHE +Q
Sbjct: 197 ALIRVWPIRDFFLRPENYASCQS-------LLVQRFGELVRKVWNPRAFKGQVSPHEFMQ 249
Query: 61 AVVLW--------------------SRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD 100
A W S K+ QSDP++FLSW +N+LH L G K+K
Sbjct: 250 ARGSWLLARSSWHAAAGSCRAVMSASSKRLIIDRQSDPLEFLSWLVNSLHLDLTGGKRKK 309
Query: 101 SSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLF 160
S++ G ++V T E + E K+ PFL L DLP PLF
Sbjct: 310 RSVITDCLQGELEVVT--------EAGTGK---AKEAIKDVIDHVPFLMLGLDLPAAPLF 358
Query: 161 KDEVLENIIPQVNLYTILTKFNNE-SEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKN 219
KD + + IIPQV ++ IL KF+ + ++ K + +RF +T LP +++L+V+RF KN
Sbjct: 359 KDALEKVIIPQVPIFDILRKFDGQLVHEDIKAGR----RRFRVTRLPRFMVLHVRRFLKN 414
Query: 220 TFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGE 279
FFVEKNPTIVNFPVKN++ + P K ++ + YDLVAN+VH+G+
Sbjct: 415 QFFVEKNPTIVNFPVKNLELAGCI-PVPKGP---------DSQPAPSKYDLVANVVHEGK 464
Query: 280 PSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
G YRVH++ K WYE+QDL VT++LPQM+ L+E Y+Q+YEL+
Sbjct: 465 AGAGLYRVHIHRKVEDVWYEVQDLRVTEVLPQMVALSETYLQVYELK 511
>gi|311252223|ref|XP_003124988.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Sus
scrofa]
Length = 213
Score = 260 bits (664), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 164/215 (76%), Gaps = 12/215 (5%)
Query: 112 MKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQ 171
M++ T+K+P +L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQ
Sbjct: 1 MRIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQ 60
Query: 172 VNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVN 231
V L+ IL KFN +EKEYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVN
Sbjct: 61 VPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVN 120
Query: 232 FPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYH 291
FP+ NVD + L+ E V+A +++T YDL+ANIVHDG+PS G+YR+H+ H
Sbjct: 121 FPITNVDLREYLSEE------------VQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLH 168
Query: 292 KGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
G GKWYE+QDL VTDILPQMITL+EAYIQI++ R
Sbjct: 169 HGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRR 203
>gi|147862940|emb|CAN83206.1| hypothetical protein VITISV_019937 [Vitis vinifera]
Length = 566
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/336 (46%), Positives = 205/336 (61%), Gaps = 36/336 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L VTPLR++FL NY K P LV RFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 252 SLMRVTPLRNFFLIPENYRHCKSP-------LVHRFGELTRKIWHARNFKGQVSPHEFLQ 304
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV+ S+K+F+ QSDP++F+SW LNTLH L T KK+SSI+Y F G ++V ++IP
Sbjct: 305 AVMKASKKRFRIGAQSDPVEFMSWLLNTLHGDLR-TSKKNSSIIYNCFQGELEV-VKEIP 362
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLP---------PPPLFKDEVLENIIPQ 171
EK R+ + + + + TC +P PPPLFKD + +NIIPQ
Sbjct: 363 NKGFFEK-RENGDDQNKATTADEHADVILETCRMPFLMLGLDLPPPPLFKDVMEKNIIPQ 421
Query: 172 VNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVN 231
V L+ IL KF+ E E + + R+ +T LP YLIL+++RFTKN FF+EKNPT+VN
Sbjct: 422 VPLFNILKKFDGELVTEVVRPRIARM-RYRVTRLPQYLILHMRRFTKNNFFIEKNPTLVN 480
Query: 232 FPVKNVDFGDIL---TPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
FPVKN++ D + P+ K S YDL+ANIVHDG+P G YRV
Sbjct: 481 FPVKNLELKDYIPLPAPKENEKLRSK-------------YDLIANIVHDGKPGEGFYRVF 527
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+ K WYE+QDLHV++ LPQM+ L+E Y+QIYE
Sbjct: 528 VQRKSEELWYEMQDLHVSETLPQMVALSETYMQIYE 563
>gi|302771339|ref|XP_002969088.1| hypothetical protein SELMODRAFT_90860 [Selaginella moellendorffii]
gi|302784408|ref|XP_002973976.1| hypothetical protein SELMODRAFT_100186 [Selaginella moellendorffii]
gi|300158308|gb|EFJ24931.1| hypothetical protein SELMODRAFT_100186 [Selaginella moellendorffii]
gi|300163593|gb|EFJ30204.1| hypothetical protein SELMODRAFT_90860 [Selaginella moellendorffii]
Length = 458
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/324 (47%), Positives = 203/324 (62%), Gaps = 33/324 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L VTPLRD+FL NY P LV RFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 165 SLMRVTPLRDFFLIPENYRHSSSP-------LVHRFGELTRKIWHARNFKGQVSPHEFLQ 217
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
A++ S+K+F+ QSDP++F SW LNTLH L GT ++SSI+Y+ F G ++V
Sbjct: 218 AIMSASKKKFRIGVQSDPVEFFSWLLNTLHSELGGTTLRNSSIIYQCFQGELEVLK---- 273
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
EL+ R + + PFL L DLPPPPLFKD + +NIIPQV L+ IL K
Sbjct: 274 --ELQSDPNNREI---------SRLPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKK 322
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
F+ E+ E + + R+ +T LP YLIL+++RF KN FF+EKNPT+VNFPVKN++
Sbjct: 323 FDGETPTEVVRPQPARM-RYRVTRLPRYLILHMRRFKKNNFFIEKNPTLVNFPVKNLELK 381
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
D + P A +K + YDL+AN VHDG+P G+YRV + K WYE+
Sbjct: 382 DYI-PLGSAD---------GSKKARSKYDLIANTVHDGKPREGSYRVFVQRKSEEVWYEM 431
Query: 301 QDLHVTDILPQMITLTEAYIQIYE 324
QDLHVT+ LPQM+ L+EAY+QIYE
Sbjct: 432 QDLHVTETLPQMVALSEAYMQIYE 455
>gi|224089613|ref|XP_002308779.1| predicted protein [Populus trichocarpa]
gi|222854755|gb|EEE92302.1| predicted protein [Populus trichocarpa]
Length = 557
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 159/335 (47%), Positives = 217/335 (64%), Gaps = 31/335 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L VTPLR++FL NY K P LVQRFGELMRK+W+ RNFK VSPHE LQ
Sbjct: 240 SLMRVTPLRNFFLIPENYQHCKSP-------LVQRFGELMRKIWHARNFKGQVSPHEFLQ 292
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV+ S+K+F+ +QSDP++F++W LNTLH L T KK++SI+Y+ F G ++V ++ P
Sbjct: 293 AVMKVSKKRFRIGQQSDPVEFMAWLLNTLHANLR-TSKKNNSIIYECFQGELEV-IKESP 350
Query: 121 PVELEEKVR--------QRLL--LTEEYKETETES-PFLYLTCDLPPPPLFKDEVLENII 169
+ EK + QR+ +T+ TET FL L DLPPPPLFKD + +NII
Sbjct: 351 NKAITEKKQNADDQSSDQRITDGVTKHDIFTETSRMQFLMLGLDLPPPPLFKDVMEKNII 410
Query: 170 PQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
PQV L+ IL KF+ ++ E + +K + +T LP YLIL+++RF KN FF+EKNPT+
Sbjct: 411 PQVPLFNILKKFDGDTVTEVVRPRVARMK-YRVTRLPRYLILHMQRFKKNNFFIEKNPTL 469
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFPVKN++ D + + + E + YDL+ANIVHDG+P+ G YRV +
Sbjct: 470 VNFPVKNLELKDFIPLPMPKENERL----------RSKYDLIANIVHDGKPNEGFYRVFV 519
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
K WYE+QDLHV++ LPQM+ L+EAY+QIYE
Sbjct: 520 QRKSEELWYEMQDLHVSETLPQMVALSEAYVQIYE 554
>gi|255559080|ref|XP_002520562.1| ubiquitin specific protease 39 and snrnp assembly factor, putative
[Ricinus communis]
gi|223540222|gb|EEF41795.1| ubiquitin specific protease 39 and snrnp assembly factor, putative
[Ricinus communis]
Length = 557
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 156/335 (46%), Positives = 212/335 (63%), Gaps = 31/335 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L VTPLR++FL NY + P LV RFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 240 SLMRVTPLRNFFLIPENYQHCRSP-------LVHRFGELTRKIWHARNFKGQVSPHEFLQ 292
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV+ S+K+F+ +QSDP++F++W LNTLH L T KK++SI+Y F G ++V ++IP
Sbjct: 293 AVMKASKKRFRIGQQSDPVEFMAWLLNTLHADLR-TSKKNNSIIYDCFQGELEV-VKEIP 350
Query: 121 PVELEEKVR--------QRLLLTEEYKETETES---PFLYLTCDLPPPPLFKDEVLENII 169
+ EK Q+ + TE+ PFL L DLPPPPLFKD + +NII
Sbjct: 351 SKAIAEKKENDDEQNSIQKTTDGGNEHDVVTETSRMPFLMLGLDLPPPPLFKDVMEKNII 410
Query: 170 PQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
PQV L+ IL KF+ E+ E + +K + +T LP YLIL+++RF KN FF+EKNPT+
Sbjct: 411 PQVPLFNILKKFDGETVTEVVRPRVARMK-YRVTRLPQYLILHMQRFKKNNFFIEKNPTL 469
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFPVKN++ D + + + E + YDL+ANIVHDG+P+ G YRV +
Sbjct: 470 VNFPVKNLELKDYIPLPMPKENERL----------RSKYDLIANIVHDGKPNEGFYRVFV 519
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
K WYE+QDLHV++ LPQM+ L+EAY+QIYE
Sbjct: 520 QRKSEELWYEMQDLHVSETLPQMVALSEAYVQIYE 554
>gi|125563679|gb|EAZ09059.1| hypothetical protein OsI_31320 [Oryza sativa Indica Group]
Length = 555
Score = 256 bits (655), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 158/328 (48%), Positives = 210/328 (64%), Gaps = 24/328 (7%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L +TPLR++FL NY K P LV RFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 245 SLMRITPLRNFFLIPENYRHSKSP-------LVHRFGELTRKIWHARNFKGQVSPHEFLQ 297
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKV--KTRK 118
AV+ S K+FQ QSDP++F+SW LNT+H L ++K++ SI++ F G ++V + K
Sbjct: 298 AVMKASDKRFQIGVQSDPVEFMSWLLNTMHSKLK-SRKRNRSIIHDCFQGELEVVKEFHK 356
Query: 119 IPPVELEEKVRQRLLLTEEYKETETES-PFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
VE +E ++ TET PFL L DLPPPPLFKD + +NIIPQV L+ I
Sbjct: 357 KHIVEKKEDGDEQNGDAGSDIVTETSRVPFLMLGLDLPPPPLFKDAMEKNIIPQVPLFNI 416
Query: 178 LTKFNNESEKEYKTYKENFLK-RFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKN 236
L KF+ E+ E + + + R+ + LP YLIL+++RFTKN FFVEKNPT+VNFPVKN
Sbjct: 417 LKKFDGETVTE--VVRPSIARMRYRVIRLPKYLILHMRRFTKNNFFVEKNPTLVNFPVKN 474
Query: 237 VDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGK 296
++ D + P K K +K + YDL+AN+VHDG+P G YRV + K
Sbjct: 475 LELKDYI-PLPKPK---------DSKKLRSKYDLIANVVHDGKPGEGCYRVFVQRKSEEA 524
Query: 297 WYEIQDLHVTDILPQMITLTEAYIQIYE 324
WYE+QDLHVT+ LPQM+ L+EAY+QIYE
Sbjct: 525 WYEMQDLHVTETLPQMVALSEAYMQIYE 552
>gi|115479091|ref|NP_001063139.1| Os09g0407900 [Oryza sativa Japonica Group]
gi|51091509|dbj|BAD36247.1| putative U4/U6.U5 tri-snRNP-associated 65 kDa protein [Oryza sativa
Japonica Group]
gi|51091565|dbj|BAD36302.1| putative U4/U6.U5 tri-snRNP-associated 65 kDa protein [Oryza sativa
Japonica Group]
gi|113631372|dbj|BAF25053.1| Os09g0407900 [Oryza sativa Japonica Group]
gi|215678580|dbj|BAG92235.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 157/328 (47%), Positives = 209/328 (63%), Gaps = 24/328 (7%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L +TPLR++FL NY K P LV RFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 244 SLMRITPLRNFFLIPENYRHSKSP-------LVHRFGELTRKIWHARNFKGQVSPHEFLQ 296
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKV--KTRK 118
AV+ S K+FQ QSDP++F+SW LNT+H L ++K++ SI++ F G ++V + K
Sbjct: 297 AVMKASDKRFQIGVQSDPVEFMSWLLNTMHSKLK-SRKRNRSIIHDCFQGELEVVKEFHK 355
Query: 119 IPPVELEEKVRQRLLLTEEYKETETES-PFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
VE +E ++ TET PFL L DLPPPPLFKD + +NIIPQV L+ I
Sbjct: 356 KHIVEKKEDGDEQNGDAGSDIVTETSRVPFLMLGLDLPPPPLFKDAMEKNIIPQVPLFNI 415
Query: 178 LTKFNNESEKEYKTYKENFLK-RFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKN 236
L KF+ E+ E + + + R+ + LP YLIL+++RFTKN FFVEKNPT+VNFPVKN
Sbjct: 416 LKKFDGETVTE--VVRPSIARMRYRVIRLPKYLILHMRRFTKNNFFVEKNPTLVNFPVKN 473
Query: 237 VDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGK 296
++ D + P K K + + YDL+AN+VHDG+P G YRV + K
Sbjct: 474 LELKDYI-PLPKPKDSEKL---------RSKYDLIANVVHDGKPGEGCYRVFVQRKSEEA 523
Query: 297 WYEIQDLHVTDILPQMITLTEAYIQIYE 324
WYE+QDLHVT+ LPQM+ L+EAY+QIYE
Sbjct: 524 WYEMQDLHVTETLPQMVALSEAYMQIYE 551
>gi|125605649|gb|EAZ44685.1| hypothetical protein OsJ_29311 [Oryza sativa Japonica Group]
Length = 554
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 157/328 (47%), Positives = 209/328 (63%), Gaps = 24/328 (7%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L +TPLR++FL NY K P LV RFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 244 SLMRITPLRNFFLIPENYRHSKSP-------LVHRFGELTRKIWHARNFKGQVSPHEFLQ 296
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKV--KTRK 118
AV+ S K+FQ QSDP++F+SW LNT+H L ++K++ SI++ F G ++V + K
Sbjct: 297 AVMKASDKRFQIGVQSDPVEFMSWLLNTMHSKLK-SRKRNRSIIHDCFQGELEVVKEFHK 355
Query: 119 IPPVELEEKVRQRLLLTEEYKETETES-PFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
VE +E ++ TET PFL L DLPPPPLFKD + +NIIPQV L+ I
Sbjct: 356 KHIVEKKEDGDEQNGDAGSDIVTETSRVPFLMLGLDLPPPPLFKDAMEKNIIPQVPLFNI 415
Query: 178 LTKFNNESEKEYKTYKENFLK-RFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKN 236
L KF+ E+ E + + + R+ + LP YLIL+++RFTKN FFVEKNPT+VNFPVKN
Sbjct: 416 LKKFDGETVTE--VVRPSIARMRYRVIRLPKYLILHMRRFTKNNFFVEKNPTLVNFPVKN 473
Query: 237 VDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGK 296
++ D + P K K + + YDL+AN+VHDG+P G YRV + K
Sbjct: 474 LELKDYI-PLPKPKDSEKL---------RSKYDLIANVVHDGKPGEGCYRVFVQRKSEEA 523
Query: 297 WYEIQDLHVTDILPQMITLTEAYIQIYE 324
WYE+QDLHVT+ LPQM+ L+EAY+QIYE
Sbjct: 524 WYEMQDLHVTETLPQMVALSEAYMQIYE 551
>gi|392570880|gb|EIW64052.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 524
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 208/341 (60%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L HV PLRD+ L NY G S LL +RF L +KLWNPR FKS VSPHE LQ
Sbjct: 201 SLLHVAPLRDHLLLS-NYR------GKQSELL-RRFAGLAKKLWNPRLFKSQVSPHEFLQ 252
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKI- 119
V S +F +Q DP++FL W LN LH+ + GTKKK+SS+++ TF G ++++T+++
Sbjct: 253 EVNRASTGKFSLEKQGDPVEFLGWLLNRLHKDMGGTKKKNSSVIFSTFQGEVRMETQQVL 312
Query: 120 --PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
P E E R R + E K SPFL+L DLPPPPLF+D V +NIIPQV++ ++
Sbjct: 313 VRPDSETGE--RPRFDIDRELK--SAVSPFLFLAVDLPPPPLFQDSVEKNIIPQVSIQSV 368
Query: 178 LTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNV 237
L K++ + +E L+RF+ LPPY++L+ KRFTKN F EKNPT+VNFP++ +
Sbjct: 369 LAKYDGQKTQE----SVGQLRRFKCQRLPPYIVLHFKRFTKNQFVEEKNPTVVNFPLRGL 424
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIG-- 295
DF + L + A + ST+YDL+ + ++ A HD E + ++VHL G
Sbjct: 425 DFREYL--DAPASHPSTVYDLIA----NVTHESAAGTTHDKEST--VWKVHLRAGAGGGE 476
Query: 296 --KWYEIQDLHVTDILPQMITLTEAYIQIYELR-TTPSPTA 333
+W++IQDL V +I +MI L E +QI+E R SPT+
Sbjct: 477 NERWFQIQDLIVEEIRKEMIVLGETILQIWERRPEAASPTS 517
>gi|356546089|ref|XP_003541464.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Glycine
max]
Length = 563
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 158/336 (47%), Positives = 214/336 (63%), Gaps = 37/336 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L VTPLR++FL NY K P LV RFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 250 SLMRVTPLRNFFLIPENYQHCKSP-------LVHRFGELTRKIWHTRNFKGQVSPHEFLQ 302
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV+ S+K+F+ QSDP++F+SW LNTLH L T KK++SI+Y+ F G ++V ++IP
Sbjct: 303 AVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLK-TSKKNTSIIYECFQGELEV-VKEIP 360
Query: 121 PVELEEKVRQRL-----LLTEEY---KETETESPFLYLTCDLPPPPLFKDEVLENIIPQV 172
+ +K + E Y KET ++ PFL L DLPPPPLFKD + +NIIPQV
Sbjct: 361 NKVISDKKENNAEKLSDGVNERYAFVKET-SKMPFLMLGLDLPPPPLFKDVMEKNIIPQV 419
Query: 173 NLYTILTKFNNESEKEYKTYKENFLK-RFEITSLPPYLILYVKRFTKNTFFVEKNPTIVN 231
L+ IL KF+ E+ E + + + ++ +T LP Y+IL+++RFTKN FFVEKNPT+VN
Sbjct: 420 PLFNILKKFDGETVTE--VVRPHIARMQYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVN 477
Query: 232 FPVKNVDFGDIL---TPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
FPVKN++ D + TP+ K T YDL+AN+VHDG+P G YRV
Sbjct: 478 FPVKNLELKDYIPLPTPKENEKLR-------------TKYDLIANVVHDGKPGEGFYRVF 524
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+ K WYE+QDLHV++ LP ++ L+E Y+QIYE
Sbjct: 525 VQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYE 560
>gi|47226448|emb|CAG08464.1| unnamed protein product [Tetraodon nigroviridis]
Length = 238
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/236 (54%), Positives = 166/236 (70%), Gaps = 12/236 (5%)
Query: 89 LHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFL 148
L+ L+ +++ + K F T+K+P +L + ++ LL+TEEY+E +ES FL
Sbjct: 2 LYTELSVAQRRHHQFLPKCFKARCGSFTKKLPHPDLLPEEKEALLVTEEYQEQMSESTFL 61
Query: 149 YLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPY 208
+LT DLP PL+KDE + IIPQV L+ IL KFN +EKEYKTYKENFLKRF++T LPPY
Sbjct: 62 FLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGNTEKEYKTYKENFLKRFQLTKLPPY 121
Query: 209 LILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMY 268
L+ +KRFTKN FFVEKNPTIVNFP+ NVD + LT E + ++T Y
Sbjct: 122 LVFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEE------------AQVTEKNTTY 169
Query: 269 DLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
DLVANIVHDG+P+ G YR+H+ H G GKWYE+QDL V DILPQMITL+EAYIQI++
Sbjct: 170 DLVANIVHDGKPTEGAYRIHVLHHGTGKWYEMQDLQVIDILPQMITLSEAYIQIWK 225
>gi|255072647|ref|XP_002499998.1| predicted protein [Micromonas sp. RCC299]
gi|226515260|gb|ACO61256.1| predicted protein [Micromonas sp. RCC299]
Length = 483
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 195/339 (57%), Gaps = 47/339 (13%)
Query: 1 ALCHVTPLRDYFL--REINYARVKRPPGDSSFL------LVQRFGELMRKLWNPRNFKSH 52
+L V P+RD+FL RE+ + + L +RFGEL RK+WN RNFK
Sbjct: 158 SLMRVGPVRDFFLAQRELGVSGAGGGGAGGAGPGPAASPLARRFGELTRKIWNSRNFKGQ 217
Query: 53 VSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSM 112
VSPHE +QAV+ S ++F +QSDP++FLSW LNTL+ L+G K+ SIV + F G +
Sbjct: 218 VSPHEFMQAVLAASDRRFLIDKQSDPVEFLSWLLNTLNADLSGKKRGGKSIVSRCFQGEL 277
Query: 113 KVKTRKI-----PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLEN 167
+V + PPV + PF L+ DLP PLF+D + +N
Sbjct: 278 EVTNAGLAYQDDPPVRM---------------------PFFMLSLDLPAAPLFQDAMEKN 316
Query: 168 IIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNP 227
IPQV L+ IL KF+ E+E E E KR+++ LP YLI++ KRFTKN FFVEKNP
Sbjct: 317 TIPQVPLFQILRKFDGETEHEV-LRPEPRRKRYKLARLPRYLIVHHKRFTKNNFFVEKNP 375
Query: 228 TIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYR 286
TIV FPVKN+ D + P+ L + Y+LVANI H+G+P +G YR
Sbjct: 376 TIVTFPVKNLQLSDHVPVPK-----------LPDGRDVPCKYNLVANITHEGKPESGAYR 424
Query: 287 VHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYEL 325
++HK G WY+ +DL V ++LPQ + LTE Y+QIYEL
Sbjct: 425 AAVWHKADGNWYDTEDLTVNEVLPQQVVLTETYLQIYEL 463
>gi|356534252|ref|XP_003535671.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Glycine
max]
Length = 569
Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 156/344 (45%), Positives = 213/344 (61%), Gaps = 48/344 (13%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L VTPLR++FL NY K P LV RFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 251 SLMRVTPLRNFFLIPENYQHCKSP-------LVHRFGELTRKIWHARNFKGQVSPHEFLQ 303
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV+ S+K+F+ QSDP++F+SW LNTLH L T KK++SI+Y+ F G ++V ++IP
Sbjct: 304 AVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLK-TSKKNTSIIYECFQGELEV-VKEIP 361
Query: 121 ----------------PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEV 164
+L + V +R +E ++ PFL L DLPPPPLFKD +
Sbjct: 362 NKVISDKKENSENQNNAEKLSDGVNERYAFVKE----TSKMPFLMLGLDLPPPPLFKDVM 417
Query: 165 LENIIPQVNLYTILTKFNNESEKEYKTYKENFLK-RFEITSLPPYLILYVKRFTKNTFFV 223
+NIIPQV L+ IL KF+ E+ E + + + ++ +T LP Y+IL+++RFTKN FFV
Sbjct: 418 EKNIIPQVPLFNILKKFDGETVTE--VVRPHIARMQYRVTRLPKYMILHMRRFTKNNFFV 475
Query: 224 EKNPTIVNFPVKNVDFGDIL---TPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP 280
EKNPT+VNFPVKN++ D + TP+ K T YDL+AN+VHDG+P
Sbjct: 476 EKNPTLVNFPVKNLELKDYIPLPTPKENEKLR-------------TKYDLIANVVHDGKP 522
Query: 281 SNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
G YRV + K WYE+QDLHV++ LP ++ L+E Y+QIYE
Sbjct: 523 GEGFYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYE 566
>gi|428184928|gb|EKX53782.1| hypothetical protein GUITHDRAFT_100752 [Guillardia theta CCMP2712]
Length = 571
Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 145/348 (41%), Positives = 204/348 (58%), Gaps = 49/348 (14%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL VT LR++FL NY K P LVQRFGEL+RK+WNP FK VSPHE+ Q
Sbjct: 219 ALSCVTELRNFFLLPENYKHFKSP-------LVQRFGELLRKMWNPSAFKGQVSPHELFQ 271
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLG-------SMK 113
A+ + S ++++ SDP +FL+WFLN+LHR L G+ K++SS+++K F G ++
Sbjct: 272 AISVESNRKYRSDVHSDPAEFLNWFLNSLHRGLGGSNKRNSSVIHKVFQGLVRFQEVRVE 331
Query: 114 VKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVN 173
K KI + E++ + +E + +T +PFL LT DLPP PL+ DE +NIIPQV
Sbjct: 332 SKKAKIKKADENERMVMDDMDDDEPWDVQT-TPFLQLTLDLPPTPLYADERDKNIIPQVP 390
Query: 174 LYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFF-VEKNPTIVNF 232
L TIL KF+ E+ + LKRF + LP YLIL +KRF NT F +EKNPTIV+F
Sbjct: 391 LLTILHKFDGVYEQNVR----GVLKRFRLLELPRYLILNIKRFNMNTQFEMEKNPTIVSF 446
Query: 233 PVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG-------------- 278
P+KN+D + + D+ + + T YDLVANI H+G
Sbjct: 447 PIKNLDLREFI-------------DIPEGQNVVTRYDLVANICHEGLVTKATGTNEVHDK 493
Query: 279 --EPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
G +R +K +W+ + DLH+ +ILPQ+++++EAYIQIYE
Sbjct: 494 GIAMKEGVFRTQCLNKAQDQWFLMDDLHIQEILPQVVSISEAYIQIYE 541
>gi|198413147|ref|XP_002123896.1| PREDICTED: similar to ubiquitin specific protease 39 [Ciona
intestinalis]
Length = 215
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 161/221 (72%), Gaps = 16/221 (7%)
Query: 112 MKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQ 171
MK+ +RKIP E E+++Q+LL +EY+E +SPFLYL DLP PL+KDE+ NIIPQ
Sbjct: 1 MKIYSRKIPNPETPEELKQKLLKEDEYQEKMEKSPFLYLALDLPAAPLYKDELEHNIIPQ 60
Query: 172 VNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVN 231
V L T+L KFN +EKEYK +++ +KRFEIT LPPYLI Y+KRFTKN FF+EKNPTIVN
Sbjct: 61 VPLATLLAKFNGMTEKEYKGKRDSTMKRFEITRLPPYLIFYIKRFTKNLFFIEKNPTIVN 120
Query: 232 FPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS--NGTYRVHL 289
FPV N+D +++ + A T YDL+ANIVHDG+P+ G+YRVH+
Sbjct: 121 FPVTNIDLEELVAAD--------------ADVPHTCYDLMANIVHDGDPNEGKGSYRVHI 166
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
H+G +WYE+QDLHV+DILPQMITL+EAYIQI+ LRT S
Sbjct: 167 LHQGSNQWYELQDLHVSDILPQMITLSEAYIQIWALRTDKS 207
>gi|303272677|ref|XP_003055700.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463674|gb|EEH60952.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 501
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 150/326 (46%), Positives = 194/326 (59%), Gaps = 34/326 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL V P+R++FL D LLVQRFGEL RK+WN RNFK VSPHE +Q
Sbjct: 195 ALMRVKPVRNFFL------------SDDQSLLVQRFGELTRKIWNSRNFKGQVSPHEFMQ 242
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV+ SR++F +QSDP+DF++W LNTLHR L+G K SS++ F G ++V T
Sbjct: 243 AVLASSRRRFLVDKQSDPVDFMTWLLNTLHRDLSGKMKGGSSVINHCFQGELEV-TSVGR 301
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P E E + PF L DLPPPPLF+D + N IPQV L IL K
Sbjct: 302 PGETGESAKM---------------PFYTLALDLPPPPLFQDAMENNFIPQVPLSQILRK 346
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
F+ E+ E +K ++I+ LP YLI++ KRFTKN FFVEKNPTIV FPVK++ G
Sbjct: 347 FDGETPHEVLRPTPG-VKTYKISRLPRYLIVHYKRFTKNNFFVEKNPTIVTFPVKSLRLG 405
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
D V +ST YDLVAN+ HDG+P+ G+YR ++H G WYE+
Sbjct: 406 D----HVPVPTRPNAIPGGGQPVDST-YDLVANVCHDGKPAEGSYRAMVHHVADGNWYEV 460
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
DL V+++LPQ + LTE Y+QIY+LR
Sbjct: 461 NDLVVSEVLPQQVVLTECYLQIYQLR 486
>gi|299470225|emb|CBN79529.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 516
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 152/393 (38%), Positives = 214/393 (54%), Gaps = 76/393 (19%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR++F+ NY DS LV FGE++R++W+P NFKS VSPHE +Q
Sbjct: 126 ALAHVPPLRNFFVEPDNYK-------DSKSTLVHAFGEVVRRVWSPSNFKSAVSPHEFIQ 178
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKT--RK 118
AV S+K+F+ QS+ IDFL+W LN+LH+ L GT+K SS+V++TF G ++V+T +K
Sbjct: 179 AVSYASKKRFRPGVQSEAIDFLAWLLNSLHQGLGGTRKAGSSVVFQTFQGLVEVETLTKK 238
Query: 119 IPPV------------------ELEEKVRQRLLLTEE--YKETETESPFLYLTCDLPPPP 158
+ L+ +E + + + E PFL+LT D+P P
Sbjct: 239 KKAILDDDDEEGGGGVGNARGKAGAAAAEDELVGFDEADWDKKKAEVPFLHLTLDIPATP 298
Query: 159 LFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTK 218
LFKD NIIPQ+ L+ +L K+N E+ + KR+ + LP YLI ++ RFTK
Sbjct: 299 LFKDSQGGNIIPQIPLFKVLDKYNGENWTDVVKGGVLTRKRYVLRRLPRYLIFHLARFTK 358
Query: 219 NTFFVEKNPTIVNFPVKNVDFGDILTPE-----------------VKA---KYESTMYDL 258
N F+VEKNPTIVNFPVKN++ D L E +KA KY + D
Sbjct: 359 NNFYVEKNPTIVNFPVKNLELKDWLRAEDPGLPKEEDLAGMSIKQLKAHLNKYSISSKDC 418
Query: 259 VKAK----------------YESTMYDLVANIVHDGEP-----------SNGTYRVHLYH 291
V+ + +T Y+L+AN+ HD P S G YR H+ +
Sbjct: 419 VERRDLEEKVRDTLIKTVPELLATKYNLLANVCHDSPPGQGKEGQTDPLSAGCYRAHVQN 478
Query: 292 KGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
K +WYE+QDLHV + +PQ+I L+E+YI IYE
Sbjct: 479 KATEQWYEVQDLHVQETMPQLIGLSESYIIIYE 511
>gi|299756400|ref|XP_001829307.2| ubiquitin C-terminal hydrolase Ubp10 [Coprinopsis cinerea
okayama7#130]
gi|298411659|gb|EAU92267.2| ubiquitin C-terminal hydrolase Ubp10 [Coprinopsis cinerea
okayama7#130]
Length = 560
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 143/334 (42%), Positives = 201/334 (60%), Gaps = 43/334 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRD L ++ + K P L++RF L +K+WNPR FKS VSPHE LQ
Sbjct: 210 ALLHVPPLRDSLL--LSDYKGKEPE------LLKRFAGLAKKVWNPRLFKSQVSPHEFLQ 261
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKI- 119
V S +F+ EQ DP++FL W LN LH+ L GTKKK SSI++KTF G ++V+T+++
Sbjct: 262 EVNRASGGKFRLEEQGDPVEFLGWLLNHLHKDLGGTKKKGSSIIFKTFQGELRVETQQVV 321
Query: 120 --PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
P + E + R + + K T SPFL+L DLPPPPLF+D V +NIIPQVN+Y++
Sbjct: 322 VRP--DAGENEKPRFDIDRDIK--TTVSPFLFLAVDLPPPPLFQDAVEKNIIPQVNIYSV 377
Query: 178 LTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNV 237
L K++ + +E + L+R++ LPPY+IL+ KRFTKN F EKNPTIVNFP++ +
Sbjct: 378 LAKYDGRTTQESAGH----LRRYKCQKLPPYIILHFKRFTKNLFVEEKNPTIVNFPLRGL 433
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG------EPSNGTYRVHLYH 291
DF + Y EST+YDL+AN+ H+ + ++ ++VH+
Sbjct: 434 DFKE--------------YIDAPPSNESTLYDLIANVTHESVAGTTRDKASTVWKVHVRA 479
Query: 292 KGIG----KWYEIQDLHVTDILPQMITLTEAYIQ 321
G G KW+ IQDL V + +MI L E +Q
Sbjct: 480 GGAGGDNEKWFLIQDLIVEETRKEMIFLGETVLQ 513
>gi|449541552|gb|EMD32535.1| spindle pole body protein [Ceriporiopsis subvermispora B]
Length = 544
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/342 (41%), Positives = 205/342 (59%), Gaps = 47/342 (13%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L HVTPLRD+ L ++ R K L++RF L +K+WNPR FKS VSPHE LQ
Sbjct: 214 SLLHVTPLRDHLL--LSDYRGKESE------LLRRFAGLAKKVWNPRLFKSQVSPHEFLQ 265
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKI- 119
VV S +F +Q DP++FLSW LN LH+ + G+K+++SSI+Y TF G ++++ +++
Sbjct: 266 EVVRASAGKFSLEKQGDPVEFLSWLLNHLHKDMGGSKRQNSSIIYSTFQGQVRMEAQQVL 325
Query: 120 --PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
P + EK R + E K T SPFL+L DLPPPPLF+D V +NIIPQV+++++
Sbjct: 326 VRPDIAGNEK--PRFDIDREIK--STVSPFLFLAVDLPPPPLFQDSVEKNIIPQVSIHSV 381
Query: 178 LTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNV 237
L K++ + KE L+RF+ LP Y+IL+ KRFT+N F EKNPTIVNFP++ +
Sbjct: 382 LAKYDGKVTKE----SAGQLQRFKCQRLPQYIILHFKRFTRNMFVEEKNPTIVNFPLRGL 437
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGT--------YRVHL 289
DF + L A + +YDL+AN+ H E + GT ++VHL
Sbjct: 438 DFREYLD--------------APAGHPPAVYDLIANVTH--ESAAGTTRDKESTVWKVHL 481
Query: 290 YHKGIG----KWYEIQDLHVTDILPQMITLTEAYIQIYELRT 327
G KW++IQDL V +I +MI L E +QI+E R+
Sbjct: 482 RAGAGGGEHEKWFQIQDLIVDEIRKEMIFLGETVLQIWERRS 523
>gi|389751280|gb|EIM92353.1| spindle pole body protein [Stereum hirsutum FP-91666 SS1]
Length = 515
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/337 (41%), Positives = 198/337 (58%), Gaps = 37/337 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L HV PLRD+ L + R G S L +RF L +K+WNPR FKS VSPHE LQ
Sbjct: 203 SLLHVAPLRDHLL-------LSRFDGKQSEFL-KRFASLSKKVWNPRLFKSQVSPHEFLQ 254
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
V S +F+ Q DP++FL W LN LH+ + GTKKK+SSI++ +F G ++++T+++
Sbjct: 255 EVGRSSGGKFRLETQGDPVEFLGWMLNHLHKDMGGTKKKNSSIIFSSFQGEVRMETQQV- 313
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
V + R + + SPFL+L DLPPPPLF+D V +NIIPQV ++T+L K
Sbjct: 314 VVRPDAATGARPHFDIDREIKTAASPFLFLAVDLPPPPLFQDAVEKNIIPQVGIHTVLAK 373
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
++ + +E + L+RF+ LPPY++L+ KRFTKN F EKNPTIVNFP++ VDF
Sbjct: 374 YDGVTTQESRGQ----LRRFKCQRLPPYIVLHYKRFTKNNFVEEKNPTIVNFPLRGVDF- 428
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG------EPSNGTYRVHLYHKGI 294
+P V S ST+YDLVAN+ H+ + N ++V L
Sbjct: 429 ---SPYVDGSSSSP----------STLYDLVANVTHESVAGTARDKENTVWKVQLRAGSG 475
Query: 295 G----KWYEIQDLHVTDILPQMITLTEAYIQIYELRT 327
G KW++IQDL V +I +MI L E +Q +E RT
Sbjct: 476 GGDNEKWFQIQDLIVEEIRKEMIFLGETVLQFWERRT 512
>gi|390605008|gb|EIN14399.1| cysteine proteinase [Punctularia strigosozonata HHB-11173 SS5]
Length = 514
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 201/341 (58%), Gaps = 43/341 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L HV PLRDY L + R G LL +RF L +KLWNPR FKS VSPHE LQ
Sbjct: 191 SLLHVPPLRDYLL-------LSRFAGKEPELL-KRFAALTKKLWNPRLFKSQVSPHEFLQ 242
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKI- 119
V S +F+ +Q DP+DFLSW LN LH+ G+KK +SSI++ F G ++++T++I
Sbjct: 243 EVGRASAGKFRLEKQGDPVDFLSWLLNQLHKDTGGSKKANSSIIFSCFQGQLRMETQQIV 302
Query: 120 --PPVELEEKVRQRLLLTEEYKETETE-SPFLYLTCDLPPPPLFKDEVLENIIPQVNLYT 176
P L EK R + +ET+T SPFL+L DLPPPPLF+D V +NIIPQV + +
Sbjct: 303 VRPDAGLNEKPRFDI-----DRETKTTISPFLFLAVDLPPPPLFQDAVEKNIIPQVTIQS 357
Query: 177 ILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKN 236
+L K++ ++ E L+RF+ LP Y+IL+ KRFTKN F EKNPTIVNFP++
Sbjct: 358 VLAKYDGKTTLE--NVARGQLQRFKCLRLPQYIILHYKRFTKNNFVEEKNPTIVNFPLRG 415
Query: 237 VDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG------EPSNGTYRVHLY 290
+DFG+ L + + TMYDL+AN+ H+ + N ++VH+
Sbjct: 416 LDFGEYLN--------------APSSHPPTMYDLLANVTHESVAGTTRDKENTVWKVHV- 460
Query: 291 HKGIG---KWYEIQDLHVTDILPQMITLTEAYIQIYELRTT 328
G G KW+ IQDL V + +MI L E +QI+E R T
Sbjct: 461 RAGSGEGEKWFMIQDLIVEETRKEMIFLGETVLQIWERRAT 501
>gi|358060680|dbj|GAA93619.1| hypothetical protein E5Q_00263 [Mixia osmundae IAM 14324]
Length = 668
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/369 (40%), Positives = 205/369 (55%), Gaps = 71/369 (19%)
Query: 1 ALCHVTPLRDYFLREINYARVKR----------------PPGDSSFL------LVQRFGE 38
AL HV PLRDYF+ A + PG S F LVQRFG
Sbjct: 262 ALMHVVPLRDYFILNSQPAAQGQISTVPPARDSPMPPSTDPGPSVFERDQRSELVQRFGT 321
Query: 39 LMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK 98
L RK+WNP+ FK+ VSPH+ LQ V L S +F TE DP++FLSW LN+LHR L G++K
Sbjct: 322 LCRKVWNPKMFKAQVSPHDFLQEVTLASGGKFSTTEPGDPLEFLSWLLNSLHRDLGGSRK 381
Query: 99 KDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKET----------ETESPFL 148
+ SSI+Y+ F G ++++ + + L++TEE E T+SPFL
Sbjct: 382 RSSSIIYEAFQGEVRLEDQAV------------LVMTEEGSEKPQFDLARDIHGTKSPFL 429
Query: 149 YLTCDLPPPPLFKDEVLE-NIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPP 207
+L DLP PPLF+D V E NIIPQV + IL K++ + E L+R+++ LPP
Sbjct: 430 FLVIDLPAPPLFQDAVNEKNIIPQVPIADILAKYDGNTTVE----SAGRLRRYKLNRLPP 485
Query: 208 YLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTM 267
+LI++ KRFT N F EKNPTIVN+P+K VD + + E M D ST+
Sbjct: 486 FLIMHFKRFTSNNFVEEKNPTIVNYPLKGVDMEEYIDSEA-------MQDDF-----STV 533
Query: 268 YDLVANIVHDGEPS----NGTYRVHLYHK------GIGKWYEIQDLHVTDILPQMITLTE 317
YDLVAN+ H N T+ V+++ + G G+W++IQDL V +I Q++ L E
Sbjct: 534 YDLVANVTHASTAGTARENTTWTVNVHTQPETAKGGEGRWFQIQDLLVEEINQQLVFLGE 593
Query: 318 AYIQIYELR 326
YIQI+E R
Sbjct: 594 TYIQIWERR 602
>gi|170084453|ref|XP_001873450.1| spindle pole body protein [Laccaria bicolor S238N-H82]
gi|164651002|gb|EDR15242.1| spindle pole body protein [Laccaria bicolor S238N-H82]
Length = 519
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/346 (41%), Positives = 203/346 (58%), Gaps = 43/346 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L H+ PLRD L + R G S LL +RF L +K+WNPR FKS VSPHE LQ
Sbjct: 201 SLLHIPPLRDSLL-------LSRYRGKESELL-KRFAGLAKKVWNPRLFKSQVSPHEFLQ 252
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKI- 119
V S +F+ +Q DP +FL W LN LH+ L GTKKK SS ++ TF G ++++T+++
Sbjct: 253 EVNRASGGKFRLEQQGDPAEFLGWLLNRLHKDLGGTKKKCSSTIFSTFQGELRLETQQVL 312
Query: 120 --PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
P V E + R + + K + SPFL+L DLPPPPLF+D + +NIIPQV ++++
Sbjct: 313 VRPDV--GENDKPRFDIDRDIK--TSVSPFLFLAVDLPPPPLFQDAIEKNIIPQVGIHSV 368
Query: 178 LTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNV 237
L+K++ + +E + L+R++ LPPY+IL+ KRFTKN F EKNPTIVNFP++ V
Sbjct: 369 LSKYDGRTTQESAGH----LRRYKCQRLPPYIILHYKRFTKNAFVEEKNPTIVNFPLRGV 424
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG------EPSNGTYRVHLYH 291
DF + Y + E+T+YDL+AN+ H+ + N ++ HL
Sbjct: 425 DFRE--------------YVDAPSTNETTLYDLIANVTHESVAGTTRDKENTVWKAHLRA 470
Query: 292 KGIG----KWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTA 333
G G KW+ IQDL V + +MI L E +QI+E RTT S
Sbjct: 471 AGGGGDNEKWFMIQDLIVEETRKEMIFLGETVLQIWERRTTISSNG 516
>gi|357474209|ref|XP_003607389.1| U4/U6.U5 tri-snRNP-associated protein [Medicago truncatula]
gi|355508444|gb|AES89586.1| U4/U6.U5 tri-snRNP-associated protein [Medicago truncatula]
Length = 544
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 151/328 (46%), Positives = 203/328 (61%), Gaps = 41/328 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L VTPLR++FL NY + LVQRFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 251 SLMRVTPLRNFFLIPENYQHCESQ-------LVQRFGELTRKIWHARNFKGQVSPHEFLQ 303
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV+ S+K+F+ QSDP++F+SW LNTLH L KK+ SI+Y+ F G ++V + IP
Sbjct: 304 AVMKASKKRFRIGAQSDPVEFVSWLLNTLHADLK-PPKKNMSIIYECFQGELEV-VKDIP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
K ++ PFL L DLPPPPLFKD + +NIIPQV L+ IL K
Sbjct: 362 NKNASAKETSKM-------------PFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKK 408
Query: 181 FNNESEKEYKTYKENFLK-RFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
F+ E+ E + + + ++ +T LP Y+IL+++RFTKN FFVEKNPT+VNFPVKN++
Sbjct: 409 FDGETITE--VVRPHIARMQYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLEL 466
Query: 240 GDIL---TPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGK 296
D + TP+ K T YDL+ANIVHDG+P G+YR + K
Sbjct: 467 KDYIPLPTPKANEKLR-------------TKYDLIANIVHDGKPGEGSYRAFVQRKSEEL 513
Query: 297 WYEIQDLHVTDILPQMITLTEAYIQIYE 324
WYE+QDLHV++ LP ++ L+E Y+QIYE
Sbjct: 514 WYEMQDLHVSETLPHLVALSETYMQIYE 541
>gi|426201316|gb|EKV51239.1| spindle pole body protein [Agaricus bisporus var. bisporus H97]
Length = 502
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 142/338 (42%), Positives = 204/338 (60%), Gaps = 39/338 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRDY L ++ R K L++RF L +K+WNPR FKS VSPHE LQ
Sbjct: 193 ALLHVPPLRDYLL--LSDFRNKETE------LIKRFAALAKKIWNPRLFKSQVSPHEFLQ 244
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKI- 119
V S +F+ +Q DP++FL W LN LH+ L G+KK++SSI++ TF G ++V+T+++
Sbjct: 245 EVNRASGGKFRLEQQGDPVEFLGWLLNRLHKDLGGSKKRNSSIIFSTFQGELRVETQQVL 304
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+ E + R + + K T SPFL+L DLPPPPLF+D +NIIPQV +++IL+
Sbjct: 305 VRPDSGENEKPRFDIDRDIK--STSSPFLFLAVDLPPPPLFQDSHEKNIIPQVGIHSILS 362
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
K++ ++ +E L+R++ LPPY+IL+ KRFTKN F EKNPTIVNFP++ +DF
Sbjct: 363 KYDGKTTQE----SAGQLRRYKCHKLPPYIILHFKRFTKNIFVEEKNPTIVNFPLRGLDF 418
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG------EPSNGTYRVHL-YHK 292
G+ Y + ST+YDL+AN+ H+ + N ++VHL +
Sbjct: 419 GE--------------YVDIPPDGGSTLYDLIANVTHESVAGTTRDKENTIWKVHLRAAR 464
Query: 293 GIG---KWYEIQDLHVTDILPQMITLTEAYIQIYELRT 327
G G KW+ IQDL V + +MI L E +QI+E R
Sbjct: 465 GGGDNEKWFLIQDLIVEETRKEMIFLGETVLQIWERRN 502
>gi|336389959|gb|EGO31102.1| hypothetical protein SERLADRAFT_444682 [Serpula lacrymans var.
lacrymans S7.9]
Length = 543
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 141/343 (41%), Positives = 202/343 (58%), Gaps = 43/343 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L H+ PLRDY L ++ R K LV+RF L +K+WNPR FKS VSPHE LQ
Sbjct: 218 SLLHIPPLRDYLL--LSNFRGKESE------LVKRFATLAKKVWNPRLFKSQVSPHEFLQ 269
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKI- 119
V S +F+ +Q DP++FL W LN LH+ GTKKK+SS+++ TF G ++V+T+++
Sbjct: 270 EVNRASTGKFRLEQQGDPVEFLGWLLNRLHKDTGGTKKKNSSVIFSTFQGELRVETQQVL 329
Query: 120 --PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
P + E + R + + K T SPFL+L DLPPPPLF+D V +NIIPQV+++++
Sbjct: 330 VRP--DAGENEKPRFDIARDSK--STTSPFLFLAVDLPPPPLFQDSVEKNIIPQVSIHSV 385
Query: 178 LTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNV 237
L K++ ++ +E L+R++ LP Y+IL+ KRFTKN F EKNPTIVNFP++ V
Sbjct: 386 LAKYDGKTTQE----SAGQLRRYKCQRLPEYIILHFKRFTKNAFVEEKNPTIVNFPLRGV 441
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG------EPSNGTYRVHL-- 289
DF D L + T+YDL+AN+ H+ + N ++VHL
Sbjct: 442 DFRDYLD--------------APPSHPPTVYDLIANVTHESVAGTTRDKENTVWKVHLRA 487
Query: 290 --YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
KW++IQDL V + +MI L E +QI+E RT S
Sbjct: 488 AGGGGEGEKWFQIQDLIVEETRKEMIFLGETVLQIWERRTDTS 530
>gi|409051981|gb|EKM61457.1| hypothetical protein PHACADRAFT_156708 [Phanerochaete carnosa
HHB-10118-sp]
Length = 517
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 141/343 (41%), Positives = 202/343 (58%), Gaps = 43/343 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L HV PLRDY L + G S +L +RF L +K+WNPR FKS VSPHE+LQ
Sbjct: 198 SLLHVPPLRDYLL-------LSNFKGKESEML-RRFAGLAKKVWNPRLFKSQVSPHELLQ 249
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK-I 119
V S +F +Q DP +FL W LN LH+ + GTKK++SS+++ TF G ++++T++ +
Sbjct: 250 EVGRASVGKFSLEKQGDPAEFLGWLLNHLHKDMGGTKKRNSSVMFSTFQGELRMETQQVV 309
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+L + R + E + T SPFL+L DLPPPPLF+D V +NIIPQV++ ++L
Sbjct: 310 VRSDLRGNEKPRFDIDREIR--TTTSPFLFLAVDLPPPPLFQDSVEKNIIPQVSIQSVLA 367
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
K++ + +E L+RF++ LPPY++L+ KRFTKN F EKNPTIVNFP++ +D
Sbjct: 368 KYDGRTAQESAGQ----LRRFKLQRLPPYIVLHFKRFTKNAFVEEKNPTIVNFPLRGLDL 423
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGT--------YRVHLYH 291
+ L V + MYDLVAN++H E + GT ++VHL
Sbjct: 424 REYLE--------------VPENHPPAMYDLVANVIH--ESAAGTTRDKESTVWKVHLRA 467
Query: 292 KGIG----KWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G +W++IQDL V +I +MI L E IQI+E R S
Sbjct: 468 GSGGGESERWFQIQDLIVEEIRKEMIFLGETIIQIWERRDDRS 510
>gi|409083639|gb|EKM83996.1| hypothetical protein AGABI1DRAFT_110600 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 502
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 141/338 (41%), Positives = 204/338 (60%), Gaps = 39/338 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRDY L ++ R K L++RF L +K+WNPR FKS VSPHE LQ
Sbjct: 193 ALLHVPPLRDYLL--LSDFRNKETE------LIKRFAALAKKIWNPRLFKSQVSPHEFLQ 244
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKI- 119
V S +F+ +Q DP++FL W LN LH+ L G+KK++SSI++ TF G ++V+T+++
Sbjct: 245 EVNRASGGKFRLEQQGDPVEFLGWLLNRLHKDLGGSKKRNSSIIFSTFQGELRVETQQVL 304
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+ E + R + + K T SPFL+L DLPPPPLF+D +NIIPQV ++++L+
Sbjct: 305 VRPDSGENEKPRFDIDRDIK--STSSPFLFLAVDLPPPPLFQDSHEKNIIPQVGIHSVLS 362
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
K++ ++ +E L+R++ LPPY+IL+ KRFTKN F EKNPTIVNFP++ +DF
Sbjct: 363 KYDGKTTQE----STGQLRRYKCHKLPPYIILHFKRFTKNIFVEEKNPTIVNFPLRGLDF 418
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG------EPSNGTYRVHL-YHK 292
G+ Y + ST+YDL+AN+ H+ + N ++VHL +
Sbjct: 419 GE--------------YVDIPPDGGSTLYDLIANVTHESVAGTTRDKENTIWKVHLRAAR 464
Query: 293 GIG---KWYEIQDLHVTDILPQMITLTEAYIQIYELRT 327
G G KW+ IQDL V + +MI L E +QI+E R
Sbjct: 465 GGGDNEKWFLIQDLIVEETRKEMIFLGETVLQIWERRN 502
>gi|297799780|ref|XP_002867774.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297313610|gb|EFH44033.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 506
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/328 (45%), Positives = 200/328 (60%), Gaps = 42/328 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L VTPLR++FL NY K P LV RFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 213 SLMRVTPLRNFFLIPENYQHCKSP-------LVHRFGELTRKIWHARNFKGQVSPHEFLQ 265
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV+ S+K+F+ +QSDP++F+SW LNTLH L T K SSI++K F G ++V
Sbjct: 266 AVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLK-TSKDASSIIHKCFQGELEV------ 318
Query: 121 PVELEEKVRQRLLLTEEYKETETES----PFLYLTCDLPPPPLFKDEVLENIIPQVNLYT 176
EY+ E + PFL L DLPPPPLFKD + +NIIPQV L+
Sbjct: 319 --------------VREYQGNENKEISRMPFLMLGLDLPPPPLFKDVMEKNIIPQVALFD 364
Query: 177 ILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKN 236
+L KF+ E+ E K + R+ IT PPYL+ ++ RF KN FF EKNPT+VNFPVK+
Sbjct: 365 LLKKFDGETVTEVVRPKLARM-RYRITKSPPYLMFHMVRFKKNNFFKEKNPTLVNFPVKD 423
Query: 237 VDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGK 296
++ D + +A + + + Y+L+ANIVHDG+P +G +RV + K
Sbjct: 424 MELRDYIPSLPRAP---------EGEKVCSKYNLIANIVHDGKPEDGYFRVFVQRKSQEL 474
Query: 297 WYEIQDLHVTDILPQMITLTEAYIQIYE 324
WYE+QDLHV + LPQM+ L+EAY+QIYE
Sbjct: 475 WYEMQDLHVAETLPQMVELSEAYMQIYE 502
>gi|395334732|gb|EJF67108.1| spindle pole body protein [Dichomitus squalens LYAD-421 SS1]
Length = 530
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/370 (40%), Positives = 207/370 (55%), Gaps = 65/370 (17%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L HVT LRD+ L ++ R K P L++RF L +K+WNPR FKS VSPHE LQ
Sbjct: 191 SLLHVTTLRDHLL--LSNFRGKEPE------LLKRFAGLAKKMWNPRLFKSQVSPHEFLQ 242
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSS------------------ 102
V S +F +Q DPIDFL W LN LH+ + GTKKK+SS
Sbjct: 243 EVNRASAGKFSLEKQGDPIDFLGWLLNHLHKDMGGTKKKNSSWSSGRRYCGPPNDLLLIG 302
Query: 103 IVYKTFLGSMKVKTRKI---PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPL 159
+++ TF G ++++T+++ P EK R + E K SPFL+L DLPPPPL
Sbjct: 303 VIFSTFQGEVRMETQQVLVRPDTGGNEK--PRFDIDREIK--SNVSPFLFLAVDLPPPPL 358
Query: 160 FKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKN 219
F+D V +NIIPQV++ ++L K++ + +E L+RF+ LPPY+IL+ KRFTKN
Sbjct: 359 FQDAVEKNIIPQVSIQSVLDKYDGQKTQE----SSGQLRRFKCQRLPPYIILHFKRFTKN 414
Query: 220 TFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGE 279
F EKNPTIVNFP++ +DF D L A + ST+YDL+AN+ H E
Sbjct: 415 MFVEEKNPTIVNFPLRGLDFKDYLD--------------ASAVHPSTVYDLIANVTH--E 458
Query: 280 PSNGT--------YRVHLYHKGIG----KWYEIQDLHVTDILPQMITLTEAYIQIYELRT 327
+ GT ++V L G +WY+IQDL V +I +MI L E +QI+E R
Sbjct: 459 SAAGTTRDKESTIWKVQLRAGAGGGENERWYQIQDLIVEEIRKEMIVLGETVLQIWERRP 518
Query: 328 TPSPTAMSEG 337
+ SP+ E
Sbjct: 519 SISPSNGMEA 528
>gi|336376913|gb|EGO05248.1| hypothetical protein SERLA73DRAFT_100998 [Serpula lacrymans var.
lacrymans S7.3]
Length = 496
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 142/343 (41%), Positives = 201/343 (58%), Gaps = 43/343 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L H+ PLRDY L ++ R K LV+RF L +K+WNPR FKS VSPHE LQ
Sbjct: 171 SLLHIPPLRDYLL--LSNFRGKESE------LVKRFATLAKKVWNPRLFKSQVSPHEFLQ 222
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKI- 119
V S +F+ +Q DP++FL W LN LH+ GTKKK+SS+++ TF G ++V+T+++
Sbjct: 223 EVNRASTGKFRLEQQGDPVEFLGWLLNRLHKDTGGTKKKNSSVIFSTFQGELRVETQQVL 282
Query: 120 --PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
P EK R + + K T SPFL+L DLPPPPLF+D V +NIIPQV+++++
Sbjct: 283 VRPDAGENEK--PRFDIARDSK--STTSPFLFLAVDLPPPPLFQDSVEKNIIPQVSIHSV 338
Query: 178 LTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNV 237
L K++ ++ +E L+R++ LP Y+IL+ KRFTKN F EKNPTIVNFP++ V
Sbjct: 339 LAKYDGKTTQE----SAGQLRRYKCQRLPEYIILHFKRFTKNAFVEEKNPTIVNFPLRGV 394
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG------EPSNGTYRVHL-- 289
DF D L + T+YDL+AN+ H+ + N ++VHL
Sbjct: 395 DFRDYLD--------------APPSHPPTVYDLIANVTHESVAGTTRDKENTVWKVHLRA 440
Query: 290 --YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
KW++IQDL V + +MI L E +QI+E RT S
Sbjct: 441 AGGGGEGEKWFQIQDLIVEETRKEMIFLGETVLQIWERRTDTS 483
>gi|296415598|ref|XP_002837473.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633345|emb|CAZ81664.1| unnamed protein product [Tuber melanosporum]
Length = 550
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 198/340 (58%), Gaps = 38/340 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PL++YF+ E +R + L QRF L+RK+WNPR FKSHVSPHE+LQ
Sbjct: 231 ALAHVAPLKNYFMLEDLSSRPE---------LAQRFSILVRKIWNPRAFKSHVSPHELLQ 281
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDP+DFLSWF+N LH +L G+K K +SI+ K F G +KV+++ I
Sbjct: 282 EISLRSSKRFTLTIQSDPVDFLSWFINNLHLSLGGSKTKPGTSIIQKVFQGRLKVESQTI 341
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
RL E + F+ LT DLPP P+FKDE +NIIPQV L TIL+
Sbjct: 342 TA---RADASDRLRFEEAAEIKMDIVRFMMLTLDLPPKPIFKDEQDKNIIPQVPLTTILS 398
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K++ +E + KR+ + S LPP+LI ++KRF+KN F E+NPTIV FP +++D
Sbjct: 399 KYDGLHSQELLGQR----KRYRLLSPLPPFLIFHIKRFSKNKFVEERNPTIVTFPTRSLD 454
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSN---------GTYRVHL 289
+ P + E YDLVANI H+ + Y+V L
Sbjct: 455 MSPYVEPSEGG-----------SSTEPIWYDLVANITHESVTTTSGKKEGDIRSVYKVQL 503
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTP 329
+K G+W++IQDL V ++ +++ +E+Y+QI++LR P
Sbjct: 504 VNKASGEWFQIQDLFVEEVARELLFTSESYVQIWQLRKEP 543
>gi|213409724|ref|XP_002175632.1| U4/U6.U5 tri-snRNP-associated protein [Schizosaccharomyces
japonicus yFS275]
gi|212003679|gb|EEB09339.1| U4/U6.U5 tri-snRNP-associated protein [Schizosaccharomyces
japonicus yFS275]
Length = 506
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/336 (40%), Positives = 199/336 (59%), Gaps = 35/336 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV P R+YFL SS +VQR L+RK+WNPR FK+HVSP E+ Q
Sbjct: 194 ALAHVKPFRNYFLLT---------DFSSSPSIVQRLATLIRKIWNPRAFKNHVSPQELTQ 244
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK-----KDSSIVYKTFLGSMKVK 115
+ + S K++ EQ DPI+FL+W L+TLH AL G++K K +SI++ F G ++++
Sbjct: 245 EITVLSHKKYSVNEQQDPIEFLTWLLSTLHVALGGSRKKVFSLKPTSIIHYIFQGCIRME 304
Query: 116 TRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLY 175
++KI + + ++ + + PFLYLT D PP PLF+DE NIIPQV++Y
Sbjct: 305 SQKI---HAQTRAGDHIVFEADRRIEVNLVPFLYLTLDPPPKPLFQDEFEGNIIPQVSVY 361
Query: 176 TILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVK 235
+LTK+N + +E F +RF IT P Y++ +VKRFT+N +F E NPTIV FP++
Sbjct: 362 ELLTKYNGVTTQELA----GFRRRFHITHAPSYIMFHVKRFTRNNYFPEHNPTIVTFPLE 417
Query: 236 NVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD----GEPSNGTYRVHLYH 291
+D L P + + L K ST+Y+L NIVH+ GE + ++V + +
Sbjct: 418 GLD----LAPYIDKTF------LEKNPKLSTIYNLCVNIVHESIFQGENESHVFKVQVKN 467
Query: 292 KGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRT 327
K KWY+IQDL+V ++ +I L E YIQI+E +T
Sbjct: 468 KATNKWYQIQDLYVEEVSSDLINLGETYIQIWERQT 503
>gi|325181123|emb|CCA15538.1| U4/U6.U5 trisnRNPassociated protein putative [Albugo laibachii
Nc14]
Length = 521
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 205/368 (55%), Gaps = 49/368 (13%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL H+ PLRD+FL N + SSFLL RFGEL+ K+W+P N K+ +SPHE +Q
Sbjct: 161 ALAHIPPLRDFFLLTSNTNITHK----SSFLL--RFGELLCKIWSPYNIKNTISPHEFVQ 214
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
V + S+++F +Q + I+F+SW LN LHR L SI+ + F G + V T
Sbjct: 215 EVSVKSKRRFHIGQQHECIEFMSWLLNELHRELCKRTNSKKSIIQECFQGFVDVTTTNES 274
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+ E Q+ + + ++PFL+L+ DLP PLFKD N+IPQV LYT+L K
Sbjct: 275 ATKSSE-TEQKEHESSAPRTQTIKTPFLFLSLDLPTSPLFKDSQGGNVIPQVPLYTVLEK 333
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD-- 238
+N + K ++I P YLIL+VKRFT+N FFVEKN TIVNFPVKN++
Sbjct: 334 YNGSKTTFVLQDLQRHKKTYQIRLHPRYLILHVKRFTRNNFFVEKNSTIVNFPVKNLEIR 393
Query: 239 ---FGDILTPEVKAKYESTM-------------YD-----------LVKAKYESTMYDLV 271
F D +P++K E ++ YD L +A ST Y+LV
Sbjct: 394 EYLFMDSQSPDMKQLDEKSIAEMRELLDQKEIPYDASETRSQLLIKLQEATLTSTKYNLV 453
Query: 272 ANIVHD-----GEPSN--------GTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEA 318
ANI HD G+ +N G+YRVH+ +K +WYEIQDLHV + LPQ+I ++E
Sbjct: 454 ANICHDSPLTKGKTTNLNTNPLTEGSYRVHVQNKATEQWYEIQDLHVQETLPQLIGVSET 513
Query: 319 YIQIYELR 326
Y+ IYE R
Sbjct: 514 YMLIYERR 521
>gi|164429365|ref|XP_958766.2| hypothetical protein NCU09547 [Neurospora crassa OR74A]
gi|38566856|emb|CAE76162.1| related to snRNP-associated protein [Neurospora crassa]
gi|157073452|gb|EAA29530.2| hypothetical protein NCU09547 [Neurospora crassa OR74A]
Length = 560
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 197/344 (57%), Gaps = 38/344 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV+PLR++FL E +++ LV+R L RK+WNPR FKSHVSPHE+LQ
Sbjct: 235 ALSHVSPLRNFFLLE-DFSNAPE--------LVKRTSILFRKIWNPRAFKSHVSPHELLQ 285
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T+QSDP++FLSWFLN LH L G+K K SS++ F G +KV+++ I
Sbjct: 286 EISLRSNKKFTLTQQSDPVEFLSWFLNHLHLGLGGSKTKPHSSVIQHIFQGKLKVESQAI 345
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
++V RL E + S FL LT DLPP PLF+DE NIIPQV L TIL
Sbjct: 346 --TARADQVHDRLRFEEAADVQSSVSRFLLLTLDLPPAPLFQDEQERNIIPQVPLTTILA 403
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K+N + +E + KR+ + LPP+L+ ++KRF+KN F E+NPTIV F +N+D
Sbjct: 404 KYNGVTAQELNAQR----KRYRLQHPLPPFLVFHIKRFSKNKFVSERNPTIVTFDARNLD 459
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH-------DGEPSNG----TYRV 287
+ P+ + E YDLVAN+VH D S G T++V
Sbjct: 460 VSPYVEPDPNSHQHG----------EPIWYDLVANVVHEAVRNKEDVADSVGEERKTWKV 509
Query: 288 HLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSP 331
L K +W QDL V + +++ L+E+Y+QI+E R P P
Sbjct: 510 QLRDKATDEWVVAQDLFVDKVRSELLYLSESYLQIWERRREPPP 553
>gi|302694755|ref|XP_003037056.1| hypothetical protein SCHCODRAFT_80616 [Schizophyllum commune H4-8]
gi|300110753|gb|EFJ02154.1| hypothetical protein SCHCODRAFT_80616 [Schizophyllum commune H4-8]
Length = 532
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 202/340 (59%), Gaps = 45/340 (13%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L HV PL DY L + +P G + LV+RF L +K+WNPR FKS VSPHE LQ
Sbjct: 194 SLLHVPPLMDYLL-------LSKPNGKQT-ELVRRFAALAKKIWNPRLFKSQVSPHEFLQ 245
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKI- 119
V S +F+ ++ DP++F+ W LN LH+ L GTKK++SS+++ TF G ++++T+++
Sbjct: 246 EVNRASGGKFRLEQKGDPVEFIGWLLNRLHKDLGGTKKRNSSVIFSTFQGELRLETQQVL 305
Query: 120 --PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
P + E + L + K T SPFL+L DLP PPLF+D V +NIIPQ ++Y++
Sbjct: 306 VRP--DAGENAKPVFDLDRDIKTTV--SPFLFLAVDLPAPPLFQDSVEKNIIPQASIYSV 361
Query: 178 LTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNV 237
L K++ ++ +EY ++R++ LPPY+IL+ KRFTKN F EKNPTIVNFP++ +
Sbjct: 362 LAKYDGQTTQEYLGQ----VRRYKCQRLPPYVILHYKRFTKNNFVEEKNPTIVNFPLRGL 417
Query: 238 DFGDIL-TPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG------EPSNGTYRVHLY 290
D DI+ PE + ST YDL+AN+ H+ + N ++ H+
Sbjct: 418 DLKDIVDNPEA---------------HPSTTYDLLANVTHESVAGTTRDKENTVWKCHVR 462
Query: 291 HKGIG----KWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
G KW+ IQDL V ++ +MI L E +QI+E R
Sbjct: 463 AGSGGGDNEKWFLIQDLIVEEVRKEMIFLGETVLQIWERR 502
>gi|336472371|gb|EGO60531.1| hypothetical protein NEUTE1DRAFT_75709 [Neurospora tetrasperma FGSC
2508]
gi|350294407|gb|EGZ75492.1| cysteine proteinase [Neurospora tetrasperma FGSC 2509]
Length = 560
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 197/344 (57%), Gaps = 38/344 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV+PLR++FL E +++ LV+R L RK+WNPR FKSHVSPHE+LQ
Sbjct: 235 ALSHVSPLRNFFLLE-DFSNAPE--------LVKRTSILFRKIWNPRAFKSHVSPHELLQ 285
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T+QSDP++FLSWFLN LH L G+K K SS++ F G +KV+++ I
Sbjct: 286 EISLRSNKKFTLTQQSDPVEFLSWFLNHLHLGLGGSKTKPHSSVIQHIFQGKLKVESQAI 345
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
++V RL E + S FL LT DLPP PLF+DE NIIPQV L TIL
Sbjct: 346 --TARADQVHDRLRFEEAADVQSSVSRFLLLTLDLPPAPLFQDEQERNIIPQVPLTTILA 403
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K+N + +E + KR+ + LPP+L+ ++KRF+KN F E+NPTIV F +N+D
Sbjct: 404 KYNGVTAQELNAQR----KRYRLQHPLPPFLVFHIKRFSKNKFVSERNPTIVTFDARNLD 459
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH-------DGEPSNG----TYRV 287
+ P+ + E YDLVAN+VH D S G T++V
Sbjct: 460 VSPYVEPDPNSHQHG----------EPIWYDLVANVVHEAVRNKEDVADSVGEERKTWKV 509
Query: 288 HLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSP 331
L K +W QDL V + +++ L+E+Y+QI+E R P P
Sbjct: 510 QLRDKATDEWVVAQDLFVDKVRSELLYLSESYLQIWERRREPLP 553
>gi|322696197|gb|EFY87993.1| U4/U6.U5 tri-snRNP-associated protein 2 [Metarhizium acridum CQMa
102]
Length = 543
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 140/345 (40%), Positives = 197/345 (57%), Gaps = 38/345 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+YFL E ++ + LV+R L RK+WNPR FK+HVSPHE+LQ
Sbjct: 216 ALSHVPPLRNYFLLE-DFTKTTE--------LVKRCSILFRKIWNPRAFKAHVSPHELLQ 266
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDP++FLSWFLN LH L G++ K SS++ +TF G +KV+++ I
Sbjct: 267 EIALRSNKRFTLTTQSDPVEFLSWFLNNLHLGLGGSRSKPGSSMIQRTFQGRLKVESQAI 326
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
RL E + FL LT DLP PLF+DE+ NIIPQV L TIL+
Sbjct: 327 ---TARADATDRLRFEEAAQVKVDIVRFLLLTLDLPAAPLFQDELERNIIPQVPLTTILS 383
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K++ +S +E+ + KR+ + LPPYLI +VKRF++N F E+NPTIV F +N+D
Sbjct: 384 KYDGKSAQEHHAQR----KRYRLLHPLPPYLIFHVKRFSQNKFVSERNPTIVTFDARNLD 439
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVH 288
+ P A++ ++ E YDLVAN+VH D T++
Sbjct: 440 VSPYVEPN-PAEWPAS---------EPIWYDLVANVVHEAVRTREDVADSGDERKTWKAQ 489
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTA 333
+ + G+W QDL+V + +++ L E Y+QI+E R P P A
Sbjct: 490 VRDRATGEWVSCQDLYVEKVQSELLYLGETYLQIWERRREPKPAA 534
>gi|403417071|emb|CCM03771.1| predicted protein [Fibroporia radiculosa]
Length = 556
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 144/364 (39%), Positives = 205/364 (56%), Gaps = 51/364 (14%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L HV PLRD+ L + G S LL +RF L +K+WNPR FKS VSPHE LQ
Sbjct: 204 SLLHVQPLRDHLL-------ISNFHGKESELL-KRFASLAKKVWNPRLFKSQVSPHEFLQ 255
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSS------------------ 102
V S +F Q DP++FL W LN LH+ + GTKKK+SS
Sbjct: 256 EVGRASAGKFSLGSQGDPVEFLGWLLNRLHKDMGGTKKKNSSTCSIYLAVLDSREPACAK 315
Query: 103 ------IVYKTFLGSMKVKTRKIPPV-ELEEKVRQRLLLTEEYKETETESPFLYLTCDLP 155
+++ TF G ++++T+++ +L + + R + E K T SPFL+L DLP
Sbjct: 316 DRVRTGVIFSTFQGQVRMETQQVVVRPDLGDNEKPRFDIDREIK--STVSPFLFLAVDLP 373
Query: 156 PPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKR 215
PPPLF+D V +NIIPQV +Y++LTK++ + +E L+RF+ LPPY+IL KR
Sbjct: 374 PPPLFQDAVEKNIIPQVGIYSVLTKYDGRTTQE----SAGQLRRFKCQQLPPYVILNFKR 429
Query: 216 FTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIV 275
FTKN F EKNPTIVNFP++ +D + L + + T+YDL+ + ++ A
Sbjct: 430 FTKNIFVEEKNPTIVNFPLRGLDLREFL--DAPPSHSPTLYDLIA----NVTHESAAGTT 483
Query: 276 HDGEPSNGTYRVHLYHKGIG----KWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSP 331
HD E + ++VHL G G KW++IQDL V +I +MI L E +QI+E R S
Sbjct: 484 HDKETT--VWKVHLRAGGGGGDTEKWFQIQDLIVEEIRKEMIFLGETVLQIWERRPVLSK 541
Query: 332 TAMS 335
T ++
Sbjct: 542 TNVT 545
>gi|331223751|ref|XP_003324548.1| hypothetical protein PGTG_05354 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309303538|gb|EFP80129.1| hypothetical protein PGTG_05354 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 715
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 201/363 (55%), Gaps = 50/363 (13%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+RDYF+ + +R LVQRFG LMRK+WNPR FK+ VSPHE Q
Sbjct: 325 LAHVPPVRDYFVCRSSEGSFERARASE---LVQRFGTLMRKIWNPRAFKAQVSPHEFGQE 381
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT---------KKKDSSIVYKTFLGSM 112
V S +F T+Q+DP++FL W LNTLHR L G+ K KD+SI++ F G +
Sbjct: 382 VATRSGGKFTLTDQADPVEFLGWLLNTLHRDLGGSKASGRKAVVKAKDTSIIHAAFRGVV 441
Query: 113 KVKTRKIPPVELEEKVRQR--LLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIP 170
KV+ ++I + +V +R + ++ + ES F++LT DLPPPP+F+D V +NIIP
Sbjct: 442 KVEEQEIVAIPDSGEVGKRPQFDINQDGRRL-IESTFMFLTLDLPPPPVFQDSVQKNIIP 500
Query: 171 QVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIV 230
QVNL T+L K++ S K + L+ + LP ++IL+ KRF N+F EKNPTIV
Sbjct: 501 QVNLTTLLQKYDGSS----KVERSGILRTHSCSRLPEFIILHFKRFGSNSFIEEKNPTIV 556
Query: 231 NFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS----NGTYR 286
NFP K VDF L + E V ++Y +YDL+ N+ + + ++
Sbjct: 557 NFPTKGVDFSVCLGANQPPQPEG-----VPSEY---LYDLLGNVTYSSTAGTAKEDSQWK 608
Query: 287 VHLYHKGIG-------------------KWYEIQDLHVTDILPQMITLTEAYIQIYELRT 327
V ++ + G KW++IQDL V ++ QM+ L E+YIQI+E R
Sbjct: 609 VQVHTRSGGPLQSSEDDPDLKSPKKEDEKWFQIQDLIVEEVNRQMVFLGESYIQIWERRA 668
Query: 328 TPS 330
S
Sbjct: 669 GSS 671
>gi|322703747|gb|EFY95351.1| U4/U6.U5 tri-snRNP-associated protein 2 [Metarhizium anisopliae
ARSEF 23]
Length = 544
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 141/347 (40%), Positives = 196/347 (56%), Gaps = 38/347 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+Y L E ++ + LV+R L RK+WNPR FK+HVSPHE+LQ
Sbjct: 216 ALSHVPPLRNYLLLE-DFTKTTE--------LVKRCSILFRKIWNPRAFKAHVSPHELLQ 266
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDP++FLSWFLN LH L G+K K SS++ +TF G +KV+++ I
Sbjct: 267 EIALRSNKRFTLTTQSDPVEFLSWFLNNLHLGLGGSKSKPGSSMIQRTFQGRLKVESQAI 326
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
RL E + FL LT DLP PLF+DE+ NIIPQV L TIL+
Sbjct: 327 ---TARADATDRLRFEEAAQVKVDIVRFLLLTLDLPAAPLFQDELERNIIPQVPLTTILS 383
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K++ +S +E+ + KR+ + LPPYLI +VKRF++N F E+NPTIV F +N+D
Sbjct: 384 KYDGKSAQEHHAQR----KRYRLLHPLPPYLIFHVKRFSQNKFVSERNPTIVTFDARNLD 439
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVH 288
+ P A++ + E YDLVAN+VH D T++
Sbjct: 440 VSPYVEPN-PAEWPVS---------EPIWYDLVANVVHEAVRTREDVADSGDERKTWKAQ 489
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTAMS 335
+ + G+W QDL+V + +++ L E Y+QI+E R P P A S
Sbjct: 490 VRDRATGEWVSCQDLYVEKVQSELLYLGETYLQIWERRREPKPAAAS 536
>gi|323451594|gb|EGB07471.1| hypothetical protein AURANDRAFT_71813 [Aureococcus anophagefferens]
Length = 1405
Score = 240 bits (613), Expect = 6e-61, Method: Composition-based stats.
Identities = 138/321 (42%), Positives = 183/321 (57%), Gaps = 34/321 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRD+FLR NYA P LV +FGEL+RKLW+ NFKS +SPHE++Q
Sbjct: 171 ALAHVAPLRDFFLRPENYAHCPAP-------LVHKFGELLRKLWSRDNFKSVISPHELVQ 223
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKT--RK 118
+ + S+ +FQ E SD DFL WFLN LHR+L GT+K+ SS+++ F G ++V+T R+
Sbjct: 224 EITVASKLRFQIGETSDAADFLVWFLNELHRSLGGTRKRGSSVIHDAFQGDVRVETLSRR 283
Query: 119 IPPVELEEKVRQRLLLTEE---YKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLY 175
+ +E ++ E +K E + PFLYLT D+P PLFKD NI+PQ+ L+
Sbjct: 284 THLTKRDEADVDDTAVSAEAQGWKRDERDLPFLYLTLDVPATPLFKDTQGGNIVPQIPLF 343
Query: 176 TILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFF-VEKNPTIVNFPV 234
+LTK+N + KR+ I LP YLI + RFTKN F EKNPTIV+ PV
Sbjct: 344 DVLTKYNGVKLSDSVKSGVQSRKRYVIRRLPKYLIFHFARFTKNNFADSEKNPTIVHIPV 403
Query: 235 KNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD----------GEP-SNG 283
K+++ D E +A E T YDL AN HD +P +G
Sbjct: 404 KDLELRDQFALEGEAAAEGA----------KTKYDLCANACHDLPMGLNKDQRADPLQHG 453
Query: 284 TYRVHLYHKGIGKWYEIQDLH 304
TYRVH+ +WYEIQDLH
Sbjct: 454 TYRVHVRQATSDQWYEIQDLH 474
>gi|392573685|gb|EIW66824.1| hypothetical protein TREMEDRAFT_34460 [Tremella mesenterica DSM
1558]
Length = 540
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/345 (40%), Positives = 204/345 (59%), Gaps = 26/345 (7%)
Query: 2 LCHVTPLRDYFLREINYA-RVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L HV P+R++ L A + R P + LVQR L ++LWNP+ FK+ +SPHE LQ
Sbjct: 209 LLHVPPVRNFLLDPATPALKEDRRPTE----LVQRLSTLCKRLWNPQLFKAQISPHEFLQ 264
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
V S +F+ TEQ DP++FL W +NTLHR L GTKK++SS++Y TF G ++++T+++
Sbjct: 265 EVAKRSAGKFKMTEQGDPVEFLGWLVNTLHRDLGGTKKRNSSVIYSTFQGKVQIETQQV- 323
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+ +E R + + + SPFL+L DLPP PLF D + IIPQV L TIL K
Sbjct: 324 -ITHKEYARPVFDIGRDIQ--TVSSPFLFLALDLPPTPLFTDLNEKKIIPQVPLSTILAK 380
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
F+ + +E+ LKR +T+LPPYLIL++KRFTKN F EKNPTIVNFP++ V+
Sbjct: 381 FDGKMTQEFGPT----LKRHHLTALPPYLILHIKRFTKNNFVEEKNPTIVNFPLRGVELN 436
Query: 241 DILTPEVKAKYESTMYDLVK-AKYESTMYDLVANIVHDG-------EPSNGTYRVHL-YH 291
D + P+ S +YDL+ +ST+ + G E T+++H+
Sbjct: 437 DYVDPKPSDPLHS-VYDLLSNVTLDSTVASTSSTGTGPGVSKRDPSEEGQTTWKIHVRAG 495
Query: 292 KGIG---KWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTA 333
+G G KW+E+QDL V ++ +M+ L E IQ++E R +P
Sbjct: 496 QGGGDEEKWFEMQDLRVEEVRREMVFLGETVIQVWERRDLSTPRG 540
>gi|56759084|gb|AAW27682.1| SJCHGC05944 protein [Schistosoma japonicum]
Length = 250
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 164/215 (76%), Gaps = 15/215 (6%)
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
PV + ++ + L + EY + +++ F YLTCDLPPPPL+ DE ENIIPQV+L T+L+K
Sbjct: 2 PVNMTDEEKASLADSPEYMTSISDTNFFYLTCDLPPPPLYLDEFKENIIPQVSLATLLSK 61
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
FN +EKEYKT++++ L+RFE+ LPPYLILY+KRF KN F +EKNPTIVNFP+K++DFG
Sbjct: 62 FNGIAEKEYKTHRDSTLRRFELRRLPPYLILYMKRFVKNIFTLEKNPTIVNFPIKSIDFG 121
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS--NGTYRVHLYHKGIGKWY 298
D+L+ E +AK+ +Y T YDL+ANIVHDG P+ +GT+R+HL H+G GKW+
Sbjct: 122 DLLSSEFRAKH----------RY--TTYDLIANIVHDGPPTPGSGTHRIHLLHRGTGKWF 169
Query: 299 EIQDLHVTDILPQMITLTEAYIQIYEL-RTTPSPT 332
E+QDLHV+++LPQMI L+E IQ++ + ++ P+P+
Sbjct: 170 ELQDLHVSEVLPQMIPLSETLIQVWAVNKSVPNPS 204
>gi|393238227|gb|EJD45765.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 602
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/348 (40%), Positives = 203/348 (58%), Gaps = 41/348 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRD+ L + K+P LV+RF L +KLWNPR FK+ VSPHE LQ
Sbjct: 266 ALLHVAPLRDFLLLS-QFDGGKQPE------LVKRFAALAKKLWNPRLFKAQVSPHEFLQ 318
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
VV S+ +F+ TE DP +FL W LN LH + G+KK++SSI+Y+TF G ++++T+++
Sbjct: 319 EVVRVSQGRFRITELGDPAEFLGWLLNRLHIDMGGSKKRNSSIIYRTFQGELRLETQQVK 378
Query: 121 -PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+L R + + + K+T T PFL+L DLP PPLF+D +NI+PQV L ++L
Sbjct: 379 VNKDLFGVARPQFDIDRDIKKTTT--PFLWLALDLPAPPLFQDGEDKNIVPQVTLASVLA 436
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
K++ + +E LKR+++T+LPPY++L+ KRFTKN F EKNPTIVNFP++ VDF
Sbjct: 437 KYDGNTTQE----NAGQLKRYKLTALPPYIVLHYKRFTKNNFVEEKNPTIVNFPLRGVDF 492
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG------EPSNGTYRVHLYHKG 293
+ L A YDL+ANI H+ + + ++VHL G
Sbjct: 493 AEYL----------------DAAGGPQAYDLLANITHESVAGTTRDKESTVWKVHLRAGG 536
Query: 294 IG----KWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTAMSEG 337
G KW+ IQDL + + MI L E +QI+E R + +S G
Sbjct: 537 GGGDGEKWFLIQDLLLEETRKDMIFLGETVLQIWE-RRADAAAGVSAG 583
>gi|22328871|ref|NP_193966.2| U4/U6.U5 tri-snRNP-associated protein 2 [Arabidopsis thaliana]
gi|18087625|gb|AAL58942.1|AF462856_1 AT4g22410/F7K2_7 [Arabidopsis thaliana]
gi|33589748|gb|AAQ22640.1| At4g22410/F7K2_7 [Arabidopsis thaliana]
gi|332659198|gb|AEE84598.1| U4/U6.U5 tri-snRNP-associated protein 2 [Arabidopsis thaliana]
Length = 510
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/328 (44%), Positives = 198/328 (60%), Gaps = 42/328 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L VTPLR++FL NY K P G RFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 217 SLMRVTPLRNFFLIPENYQHCKSPLG-------HRFGELTRKIWHARNFKGQVSPHEFLQ 269
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV+ S+K+F+ +QSDP++F+SW LNTLH L T K SSI++K F G ++V
Sbjct: 270 AVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLR-TSKDASSIIHKCFQGELEV------ 322
Query: 121 PVELEEKVRQRLLLTEEYKETETES----PFLYLTCDLPPPPLFKDEVLENIIPQVNLYT 176
+EY+ E + PFL L DLPPPPLFKD + +NIIPQV L+
Sbjct: 323 --------------VKEYQGNENKEISRMPFLMLGLDLPPPPLFKDVMEKNIIPQVALFD 368
Query: 177 ILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKN 236
+L KF+ E+ E K + R+ + P YL+ ++ RF KN FF EKNPT+VNFPVK+
Sbjct: 369 LLKKFDGETVTEVVRPKLARM-RYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKD 427
Query: 237 VDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGK 296
++ D + +A + + + Y+L+ANIVHDG+P +G +RV + K
Sbjct: 428 MELRDYIPSLPRAP---------EGENVCSKYNLIANIVHDGKPEDGYFRVFVQRKSQEL 478
Query: 297 WYEIQDLHVTDILPQMITLTEAYIQIYE 324
WYE+QDLHV + LPQM+ L+EAY+QIYE
Sbjct: 479 WYEMQDLHVAETLPQMVELSEAYMQIYE 506
>gi|334186810|ref|NP_001190799.1| U4/U6.U5 tri-snRNP-associated protein 2 [Arabidopsis thaliana]
gi|332659199|gb|AEE84599.1| U4/U6.U5 tri-snRNP-associated protein 2 [Arabidopsis thaliana]
Length = 539
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/328 (44%), Positives = 197/328 (60%), Gaps = 42/328 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L VTPLR++FL NY K P G RFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 246 SLMRVTPLRNFFLIPENYQHCKSPLG-------HRFGELTRKIWHARNFKGQVSPHEFLQ 298
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV+ S+K+F+ +QSDP++F+SW LNTLH L T K SSI++K F G ++V
Sbjct: 299 AVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLR-TSKDASSIIHKCFQGELEV------ 351
Query: 121 PVELEEKVRQRLLLTEEYKETETES----PFLYLTCDLPPPPLFKDEVLENIIPQVNLYT 176
+EY+ E + PFL L DLPPPPLFKD + +NIIPQV L+
Sbjct: 352 --------------VKEYQGNENKEISRMPFLMLGLDLPPPPLFKDVMEKNIIPQVALFD 397
Query: 177 ILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKN 236
+L KF+ E+ E K + R+ + P YL+ ++ RF KN FF EKNPT+VNFPVK+
Sbjct: 398 LLKKFDGETVTEVVRPKLARM-RYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKD 456
Query: 237 VDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGK 296
++ D + +A + + Y+L+ANIVHDG+P +G +RV + K
Sbjct: 457 MELRDYIPSLPRAPEGENV---------CSKYNLIANIVHDGKPEDGYFRVFVQRKSQEL 507
Query: 297 WYEIQDLHVTDILPQMITLTEAYIQIYE 324
WYE+QDLHV + LPQM+ L+EAY+QIYE
Sbjct: 508 WYEMQDLHVAETLPQMVELSEAYMQIYE 535
>gi|407921556|gb|EKG14698.1| Peptidase C19 ubiquitin carboxyl-terminal hydrolase 2 [Macrophomina
phaseolina MS6]
Length = 558
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 195/340 (57%), Gaps = 37/340 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HVTPLR++F+ E +R + L QRF L+RK+WNPR FKSHVSPHE+LQ
Sbjct: 238 ALAHVTPLRNFFMLEDLSSRPQ---------LAQRFSTLVRKIWNPRAFKSHVSPHELLQ 288
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F TEQSDP+DFL WFLN LH +L G+K K SSIV + F GS+K++++ I
Sbjct: 289 EIALRSSKRFTLTEQSDPVDFLQWFLNNLHLSLGGSKSKPGSSIVQRVFQGSLKIESQLI 348
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
RL + ++E ++ F+ LT DLPP P+F+DE+ +NIIPQV L ILT
Sbjct: 349 T---ARADAADRLRFEDSDVQSE-KTHFMILTLDLPPRPVFQDELEKNIIPQVPLTRILT 404
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
K++ S +E+ Y++ + + + ++KRF+KN F E+NPTIV FP +++D
Sbjct: 405 KYDGVSAQEHLNYRKRYRLLHPLPPYLLF---HIKRFSKNKFVSERNPTIVTFPTRSLDM 461
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVHL 289
+ P + + E YDLVANI H +GE +RVHL
Sbjct: 462 SPYVEPNP----------TIHSPGEPIWYDLVANITHEAVRIRDDSVEGESEKKVWRVHL 511
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTP 329
K +W E+QDL V + + E+Y+Q++E R P
Sbjct: 512 RDKSRDEWLEVQDLFVEMARAETLFTKESYVQVWEKRREP 551
>gi|408388380|gb|EKJ68066.1| hypothetical protein FPSE_11877 [Fusarium pseudograminearum CS3096]
Length = 534
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 140/342 (40%), Positives = 194/342 (56%), Gaps = 39/342 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+Y L E ++ + LV+R L+RK+WNPR FK+HVSPHE+LQ
Sbjct: 213 ALAHVAPLRNYLLLEDFSSKTE---------LVKRASILVRKIWNPRAFKAHVSPHELLQ 263
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDP+DFLSWFLN LH L G+K K SS++ +TF G MK++++ I
Sbjct: 264 EISLRSNKRFNLTSQSDPVDFLSWFLNNLHLGLGGSKTKPGSSMIQRTFQGKMKIESQAI 323
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
RL + + + FL LT DLP PLF+DE+ +NIIPQV L TILT
Sbjct: 324 TA---RADATDRLRFEDADVKVDIVR-FLLLTLDLPSTPLFQDELEKNIIPQVPLTTILT 379
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K++ + +E+ + KR+ + LPPYL +VKRF++N F E+NPTIV F +N+D
Sbjct: 380 KYDGQRAQEHHAQR----KRYRLMHPLPPYLAFHVKRFSQNKFVSERNPTIVTFDARNLD 435
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVH 288
+ P K E YDLVAN+VH D T++V
Sbjct: 436 MSPYVEPNPKEWPPG----------EPIWYDLVANVVHEAVRTREDVVDSGEERKTWKVQ 485
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
L +K G+W QDL+V + +++ L E Y+QI+E R P+
Sbjct: 486 LKNKATGEWVVCQDLYVDKVQSELLYLGETYLQIWERRREPN 527
>gi|221482682|gb|EEE21020.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
GT1]
Length = 574
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 131/329 (39%), Positives = 190/329 (57%), Gaps = 40/329 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+LC V PLR++ L P ++Q GELMRK++N RNFK VSPHE LQ
Sbjct: 212 SLCTVVPLRNWLLLLDLSHVQNYDP------VLQTLGELMRKIFNARNFKGIVSPHEFLQ 265
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV + S+K+F+ EQ+DP+ F W + +H++ KK +S++V F G ++V+T
Sbjct: 266 AVGVASKKKFRIGEQADPLQFFCWLMTRVHQSAK-HKKLNSNVVNDCFQGEVEVRT---- 320
Query: 121 PVELEEKVRQRLLLTEEYKETE-----TESPFLYLTCDLPPPPLFKDEVLENIIPQVNLY 175
T E + T + PFL+LT DLP P+FKD + N+IP + ++
Sbjct: 321 -------------TTAEGEATGQPPSVSRVPFLFLTLDLPQAPIFKDSLDRNMIPHIPIF 367
Query: 176 TILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVK 235
+L KFN E + LKR+ + LP YL+L+VKRF+KN F+VEKNPTIV FPVK
Sbjct: 368 DLLQKFNGEQIQVRLRATPGTLKRYSLWRLPKYLVLHVKRFSKNNFYVEKNPTIVTFPVK 427
Query: 236 NVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIG 295
++D + + +E DL YDLVANI H G+P +G Y+VH+ H
Sbjct: 428 HLDLREYV-------HEDAPADLNPV----AKYDLVANICHQGKPHDGQYKVHVLHAPTN 476
Query: 296 KWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+W+EI+DL VT +LPQ + L+E+Y+Q+Y+
Sbjct: 477 EWFEIEDLRVTQVLPQFVALSESYVQVYQ 505
>gi|400600854|gb|EJP68522.1| U4/U6.U5 tri-snRNP-associated protein [Beauveria bassiana ARSEF
2860]
Length = 557
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 140/341 (41%), Positives = 188/341 (55%), Gaps = 38/341 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+Y L E + + LV+R L RK+WNPR FKSHVSPHE+LQ
Sbjct: 232 ALSHVAPLRNYLLLEDFSGKSE---------LVKRCSILFRKIWNPRAFKSHVSPHELLQ 282
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDP+DFLSWFLN LH L G+K + SS+V + F G +KV+++ I
Sbjct: 283 EIALRSNKRFTLTSQSDPVDFLSWFLNNLHIGLGGSKTRPGSSMVQRAFQGRLKVESQAI 342
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
V RL + + + FL LT DLP PLF+DE+ NIIPQV L +IL
Sbjct: 343 TA---RADVGDRLRFEDAGEVSVDVVRFLLLTLDLPSAPLFQDELERNIIPQVPLTSILA 399
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K++ S +E+ + KR+ + LPPYL L+VKRF+ N F E+NPTIV F +N+D
Sbjct: 400 KYDGRSAQEHHAQR----KRYRLLHPLPPYLALHVKRFSHNKFVAERNPTIVTFDARNLD 455
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVH 288
+ P+ A E YDLVAN+VH D ++V
Sbjct: 456 VAPYVEPDPAAWPPG----------EPIWYDLVANVVHEAVRTREDVADTGEERKAWKVQ 505
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTP 329
L K G+W QDL V + +++ L E+Y+QI+E R P
Sbjct: 506 LRDKATGEWVVCQDLFVDKVQSELLYLGESYLQIWERRRDP 546
>gi|401395797|ref|XP_003879683.1| ubiquitin carboxyl-terminal hydrolase, related [Neospora caninum
Liverpool]
gi|325114090|emb|CBZ49648.1| ubiquitin carboxyl-terminal hydrolase, related [Neospora caninum
Liverpool]
Length = 562
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 131/329 (39%), Positives = 190/329 (57%), Gaps = 43/329 (13%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+LC V PLR++ L P ++Q GELMRK++N RNFK VSPHE LQ
Sbjct: 204 SLCAVIPLRNWLLLLDLSHVQNYDP------VLQTLGELMRKIFNARNFKGIVSPHEFLQ 257
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV + S+K+F+ EQ+DP+ F W + +H++ KK +S++V F G ++V+T
Sbjct: 258 AVGVASKKKFRIGEQADPLQFFCWLMARVHQSAK-HKKVNSNVVNDCFQGEVEVRT---- 312
Query: 121 PVELEEKVRQRLLLTEEYKETE-----TESPFLYLTCDLPPPPLFKDEVLENIIPQVNLY 175
T E + T + PFL+LT DLP P+FKD + N+IP + ++
Sbjct: 313 -------------TTAEGEATGQPPSVSRIPFLFLTLDLPQAPIFKDSLDRNMIPHIPIF 359
Query: 176 TILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVK 235
+L KFN E +E LKR+ + LP YL+L+VKRF+KN F+VEKNPTIV FPVK
Sbjct: 360 DLLQKFNGEQIQETTP---GTLKRYSLWRLPKYLVLHVKRFSKNNFYVEKNPTIVTFPVK 416
Query: 236 NVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIG 295
++D D + + + T YDLVANI H G+P +G Y+VH+ H
Sbjct: 417 HLDLRDYVHEDAPMELNPV-----------TKYDLVANICHQGKPHDGQYKVHVLHAPTN 465
Query: 296 KWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+W+EI+DL VT +LPQ + L+E+Y+Q+Y+
Sbjct: 466 EWFEIEDLRVTQVLPQFVALSESYVQVYQ 494
>gi|237841835|ref|XP_002370215.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
ME49]
gi|211967879|gb|EEB03075.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
ME49]
gi|221503124|gb|EEE28830.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
VEG]
Length = 571
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 132/329 (40%), Positives = 191/329 (58%), Gaps = 43/329 (13%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+LC V PLR++ L P ++Q GELMRK++N RNFK VSPHE LQ
Sbjct: 212 SLCTVVPLRNWLLLLDLSHVQNYDP------VLQTLGELMRKIFNARNFKGIVSPHEFLQ 265
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV + S+K+F+ EQ+DP+ F W + +H++ KK +S++V F G ++V+T
Sbjct: 266 AVGVASKKKFRIGEQADPLQFFCWLMTRVHQSAK-HKKLNSNVVNDCFQGEVEVRT---- 320
Query: 121 PVELEEKVRQRLLLTEEYKETE-----TESPFLYLTCDLPPPPLFKDEVLENIIPQVNLY 175
T E + T + PFL+LT DLP P+FKD + N+IP + ++
Sbjct: 321 -------------TTAEGEATGQPPSVSRVPFLFLTLDLPQAPIFKDSLDRNMIPHIPIF 367
Query: 176 TILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVK 235
+L KFN E +E LKR+ + LP YL+L+VKRF+KN F+VEKNPTIV FPVK
Sbjct: 368 DLLQKFNGEQIQEATP---GTLKRYSLWRLPKYLVLHVKRFSKNNFYVEKNPTIVTFPVK 424
Query: 236 NVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIG 295
++D + + +E DL YDLVANI H G+P +G Y+VH+ H
Sbjct: 425 HLDLREYV-------HEDAPADLNPV----AKYDLVANICHQGKPHDGQYKVHVLHAPTN 473
Query: 296 KWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+W+EI+DL VT +LPQ + L+E+Y+Q+Y+
Sbjct: 474 EWFEIEDLRVTQVLPQFVALSESYVQVYQ 502
>gi|95007145|emb|CAJ20366.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
RH]
Length = 570
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 132/329 (40%), Positives = 191/329 (58%), Gaps = 43/329 (13%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+LC V PLR++ L P ++Q GELMRK++N RNFK VSPHE LQ
Sbjct: 211 SLCTVVPLRNWLLLLDLSHVQNYDP------VLQTLGELMRKIFNARNFKGIVSPHEFLQ 264
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV + S+K+F+ EQ+DP+ F W + +H++ KK +S++V F G ++V+T
Sbjct: 265 AVGVASKKKFRIGEQADPLQFFCWLMTRVHQSAK-HKKLNSNVVNDCFQGEVEVRT---- 319
Query: 121 PVELEEKVRQRLLLTEEYKETE-----TESPFLYLTCDLPPPPLFKDEVLENIIPQVNLY 175
T E + T + PFL+LT DLP P+FKD + N+IP + ++
Sbjct: 320 -------------TTAEGEATGQPPSVSRVPFLFLTLDLPQAPIFKDSLDRNMIPHIPIF 366
Query: 176 TILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVK 235
+L KFN E +E LKR+ + LP YL+L+VKRF+KN F+VEKNPTIV FPVK
Sbjct: 367 DLLQKFNGEQIQEATP---GTLKRYSLWRLPKYLVLHVKRFSKNNFYVEKNPTIVTFPVK 423
Query: 236 NVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIG 295
++D + + +E DL YDLVANI H G+P +G Y+VH+ H
Sbjct: 424 HLDLREYV-------HEDAPADLNPV----AKYDLVANICHQGKPHDGQYKVHVLHAPTN 472
Query: 296 KWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+W+EI+DL VT +LPQ + L+E+Y+Q+Y+
Sbjct: 473 EWFEIEDLRVTQVLPQFVALSESYVQVYQ 501
>gi|342878492|gb|EGU79829.1| hypothetical protein FOXB_09688 [Fusarium oxysporum Fo5176]
Length = 538
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 140/341 (41%), Positives = 193/341 (56%), Gaps = 39/341 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+Y L E + + LV+R L+RK+WNPR FK+HVSPHE+LQ
Sbjct: 218 ALAHVAPLRNYLLLEDFSNKTE---------LVKRCSILVRKIWNPRAFKAHVSPHELLQ 268
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDP+DFLSWFLN LH L G+K K SS++ +TF G MKV+++ I
Sbjct: 269 EISLRSNKRFTLTTQSDPVDFLSWFLNNLHLGLGGSKTKPGSSMIQRTFQGKMKVESQAI 328
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
RL + + + FL LT DLP PLF+DE+ +NIIPQV L TILT
Sbjct: 329 ---TARADATDRLRFEDADVKVDIVR-FLLLTLDLPSAPLFQDELEKNIIPQVPLTTILT 384
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K++ + +E+ + KR+ + LPP+L +VKRF++N F E+NPTIV F +N+D
Sbjct: 385 KYDGQRAQEHHAQR----KRYRLMHPLPPFLAFHVKRFSQNKFVSERNPTIVTFDARNLD 440
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVH 288
+ P K E YDLVAN++H D T++V
Sbjct: 441 MSPYVEPNPKEWPPG----------EPIWYDLVANVIHEAVRVREDVVDSGEERKTWKVQ 490
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTP 329
L +K G+W QDL+V + +++ L EAY+QI+E R P
Sbjct: 491 LKNKATGEWVVCQDLYVDKVQSELLYLGEAYLQIWERRRDP 531
>gi|145333717|ref|NP_001078426.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis
thaliana]
gi|23397271|gb|AAN31917.1| unknown protein [Arabidopsis thaliana]
gi|110741459|dbj|BAE98689.1| hypothetical protein [Arabidopsis thaliana]
gi|332659187|gb|AEE84587.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis
thaliana]
Length = 541
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 148/324 (45%), Positives = 198/324 (61%), Gaps = 34/324 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L VTPLR++FL NY K P LV RFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 248 SLMRVTPLRNFFLIPENYQHCKSP-------LVHRFGELTRKIWHARNFKGQVSPHEFLQ 300
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV+ S+K+F+ +QSDP++F+SW LNTLH L T K SSI++K F G ++V
Sbjct: 301 AVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLR-TSKDASSIIHKCFQGELEV------ 353
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
V++ E KE S FL L DLPPPPLFKD + +NIIPQV L+ +L K
Sbjct: 354 -------VKE--FQGNENKEISRMS-FLMLGLDLPPPPLFKDVMEKNIIPQVALFDLLKK 403
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
F+ E+ E K + R+ + P YL+ ++ RF KN FF EKNPT+VNFPVK+++
Sbjct: 404 FDGETVTEVVRPKLARM-RYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLVNFPVKDMELR 462
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
D + +A + + Y+L+ANIVHDG+P +G +RV + K WYE+
Sbjct: 463 DYIPSLPRAPEGENV---------CSKYNLIANIVHDGKPEDGYFRVFVQRKSQELWYEM 513
Query: 301 QDLHVTDILPQMITLTEAYIQIYE 324
QDLHV + LPQM+ L+EAY+QIYE
Sbjct: 514 QDLHVAETLPQMVELSEAYMQIYE 537
>gi|302911281|ref|XP_003050458.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731395|gb|EEU44745.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 538
Score = 236 bits (603), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 192/341 (56%), Gaps = 39/341 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+Y L E + + LV+R L+RK+WNPR FK+HVSPHE+LQ
Sbjct: 216 ALAHVAPLRNYLLLEDFPDKTE---------LVKRCSILVRKIWNPRAFKAHVSPHELLQ 266
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDP+DFLSWFLN LH L G+K K SS+V +TF G MKV+++ I
Sbjct: 267 EISLRSNKRFTLTAQSDPVDFLSWFLNNLHLGLGGSKTKPGSSMVQRTFQGKMKVESQAI 326
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
RL + + + FL LT DLP PLF+DE+ +NIIPQV L TILT
Sbjct: 327 ---TARADASDRLRFEDADVKVDVVR-FLLLTLDLPSAPLFQDELEKNIIPQVPLTTILT 382
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K++ + +E+ + KR+ + LPPYLI +VKRF++N F E+NPTIV F +N+D
Sbjct: 383 KYDGQRAQEHHAQR----KRYRLMHPLPPYLIFHVKRFSQNKFVSERNPTIVTFDARNLD 438
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVH 288
+ P + E YDLVAN+VH D T++V
Sbjct: 439 MSPYVEPNPREWPPG----------EPIWYDLVANVVHEAVRVREDVVDSGEERKTWKVQ 488
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTP 329
L +K G+W QDL V + +++ L E Y+Q++E R P
Sbjct: 489 LKNKATGEWVVCQDLFVDKVQSELLYLGETYLQVWERRREP 529
>gi|380480497|emb|CCF42398.1| ubiquitin carboxyl-terminal hydrolase [Colletotrichum higginsianum]
Length = 535
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/341 (40%), Positives = 195/341 (57%), Gaps = 39/341 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR++ L E +R + L +RFG L+RK+WNPR FK+HVSPHE+LQ
Sbjct: 219 ALAHVVPLRNFCLLEDLSSRSE---------LAKRFGILVRKIWNPRAFKAHVSPHELLQ 269
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTK-KKDSSIVYKTFLGSMKVKTRKI 119
+ L S K++ T QSDP++FLSWFLN LH L G+K K SS+V + F G +KV+++ I
Sbjct: 270 EISLLSNKRYTLTAQSDPVEFLSWFLNNLHLGLGGSKTKAGSSVVQRIFQGKLKVESQAI 329
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+ R R E+ + T S F++LT DLP PLF+DE+ +NIIPQV L TIL+
Sbjct: 330 -TARADAGDRLRF---EDAAVSVTTSRFMFLTLDLPAAPLFQDELEKNIIPQVPLTTILS 385
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K++ +E+ + KR+ + LPPYL+L+VKRF++N F E+NPTIV F + +D
Sbjct: 386 KYDGIHAQEHLAQR----KRYRLLHPLPPYLVLHVKRFSQNKFVSERNPTIVTFDPRGLD 441
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVH 288
+ P E YDLVAN+VH D T++V
Sbjct: 442 VSPYVEPNTSEWPPG----------EPIWYDLVANVVHEAVRAKEDVADSGEERKTWKVQ 491
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTP 329
L KG +W QDL V + +++ L E Y+Q++E R TP
Sbjct: 492 LKDKGRDEWVSCQDLFVEKVQSELLYLGETYLQVWERRKTP 532
>gi|46124823|ref|XP_386965.1| hypothetical protein FG06789.1 [Gibberella zeae PH-1]
Length = 534
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/342 (40%), Positives = 194/342 (56%), Gaps = 39/342 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+Y L E ++ + LV+R L+RK+WNPR FK+HVSPHE+LQ
Sbjct: 213 ALAHVAPLRNYLLLEDFSSKTE---------LVKRASILVRKIWNPRAFKAHVSPHELLQ 263
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDP+DFLSWFLN LH L G+K K SS++ +TF G MK++++ I
Sbjct: 264 EISLRSNKRFNLTLQSDPVDFLSWFLNNLHIGLGGSKTKPGSSMIQRTFQGKMKIESQAI 323
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
RL + + + FL LT DLP PLF+DE+ +NIIPQV L TILT
Sbjct: 324 TA---RADATDRLRFEDADVKVDIVR-FLLLTLDLPSTPLFQDELEKNIIPQVPLTTILT 379
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K++ + +E+ + KR+ + LPPYL +VKRF++N F E+NPTIV F +N+D
Sbjct: 380 KYDGQRAQEHHAQR----KRYRLMHPLPPYLAFHVKRFSQNKFVSERNPTIVTFDARNLD 435
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVH 288
+ P K E YDLVAN+VH D T++V
Sbjct: 436 MSPYVEPNPKEWPPG----------EPIWYDLVANVVHEAVRTREDVVDSGEERKTWKVQ 485
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
L +K G+W QDL+V + +++ L E Y+QI+E R P+
Sbjct: 486 LKNKATGEWVVCQDLYVDKVQSELLYLGETYLQIWERRREPN 527
>gi|401882743|gb|EJT46987.1| ubiquitin hydrolase [Trichosporon asahii var. asahii CBS 2479]
Length = 531
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 16/336 (4%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL N +++ + LV R L R+LWNPR FK+ VSPHE
Sbjct: 204 LLHVPPIRNFFLNP-NTPQLQESARPTE--LVSRLAALTRRLWNPRLFKAQVSPHEFFHE 260
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
V S +F EQ DP++FL W +NTLHR L GT+K++SS++Y TF G ++++T+KI
Sbjct: 261 VTKRSNGKFTTIEQGDPVEFLGWLINTLHRGLGGTRKRNSSVIYTTFQGKVQIETQKI-- 318
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKF 181
+ K R + E SPFL+L DLP PLF+D + IIPQV+L +IL KF
Sbjct: 319 --ITHKDYARPVFEESRDIERMSSPFLFLALDLPATPLFQDANEKKIIPQVSLASILAKF 376
Query: 182 NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD 241
+ ++ +E+ LKR + +LPPYLIL++KRFTKN F EKNPTIVNFP++ VD
Sbjct: 377 DGKTTQEFGPT----LKRHHLQALPPYLILHIKRFTKNNFVEEKNPTIVNFPMRGVDMQP 432
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD-GEPSNGTYRV-HLYHKGIG---K 296
+ P+ + L ESTM A+ D + S +++ +G G +
Sbjct: 433 YVDPKPSDPIMACYDLLSNVVLESTMASTKASGKPDPSDDSTVAWKIFQRAGRGGGESER 492
Query: 297 WYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
WYE+QDL V D+ +M+ L E IQ++E R +P
Sbjct: 493 WYEMQDLRVEDVRREMVPLGETVIQVWERRDLSTPA 528
>gi|340522343|gb|EGR52576.1| predicted protein [Trichoderma reesei QM6a]
Length = 554
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/345 (40%), Positives = 194/345 (56%), Gaps = 38/345 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV+PLR+YFL E ++++ LV+R L RK+WNPR FK+HVSPHE+LQ
Sbjct: 228 ALSHVSPLRNYFLLE-DFSKKSE--------LVKRCSILFRKIWNPRAFKAHVSPHELLQ 278
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
V L S K+F T QSDP++FLSWFLN LH L G+K K SS++ +TF G +KV+++ I
Sbjct: 279 EVALQSNKRFTLTHQSDPVEFLSWFLNNLHLGLGGSKTKPGSSMIQRTFQGKLKVESQAI 338
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
RL E + FL LT DLP PLF+DE+ +NIIPQV L TIL+
Sbjct: 339 TA---RADAGDRLRFEEAAEVKVDVVRFLLLTLDLPSAPLFQDELEKNIIPQVPLSTILS 395
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K++ + +E+ + KR+ + LPP+L+L+VKRF++N F E+NPTIV F +N+D
Sbjct: 396 KYDGKRAQEHHAQR----KRYRLLHPLPPFLMLHVKRFSQNKFVAERNPTIVTFDARNLD 451
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVH 288
+ P E YDLVAN+VH D T++V
Sbjct: 452 VSPYVEPNPNEWPVG----------EPIWYDLVANVVHEAVRKRDDVADSGEEKKTWKVQ 501
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTA 333
L +K +W QDL V + +++ L E Y+QI+E R P A
Sbjct: 502 LKNKATDEWVVCQDLFVDKVQSELLYLGETYLQIWERRRVPGKKA 546
>gi|429859841|gb|ELA34603.1| u4 tri-snrnp-associated protein 2 [Colletotrichum gloeosporioides
Nara gc5]
Length = 551
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 138/341 (40%), Positives = 196/341 (57%), Gaps = 39/341 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR++ L E +R + L +RFG L+RK+WNPR FK+HVSPHE+LQ
Sbjct: 232 ALSHVAPLRNFCLLEDLSSRSE---------LAKRFGILVRKIWNPRAFKAHVSPHELLQ 282
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDP++FLSWFLN LH L G+K K SS+V + F G +KV+++ I
Sbjct: 283 EISLLSSKRFTLTAQSDPVEFLSWFLNNLHLGLGGSKTKPGSSVVQRIFQGKLKVESQAI 342
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+ R R E+ + T + F++LT DLP PLF+DE+ +NIIPQV L TIL+
Sbjct: 343 -TARADAGDRLRF---EDAAVSVTSTRFMFLTLDLPAAPLFQDELEKNIIPQVPLTTILS 398
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K++ +E+ + KR+ + LPPYL+ +VKRF++N F E+NPTIV F +D
Sbjct: 399 KYDGIQAQEHLAQR----KRYRLLHPLPPYLVFHVKRFSQNKFVSERNPTIVTFDPNGLD 454
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVH 288
+ P ++ E +YDLVAN+VH D T++V
Sbjct: 455 VSPYVEPN-PGEWPPG---------EPIIYDLVANVVHEAVRAKEDVADSGEERKTWKVQ 504
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTP 329
L KG +W QDL V + +++ L E Y+Q++E R TP
Sbjct: 505 LRDKGRDEWVSCQDLFVEKVQSELLYLGETYLQVWERRRTP 545
>gi|406700486|gb|EKD03653.1| ubiquitin hydrolase [Trichosporon asahii var. asahii CBS 8904]
Length = 531
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 135/336 (40%), Positives = 193/336 (57%), Gaps = 16/336 (4%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL N +++ + LV R L R+LWNPR FK+ VSPHE
Sbjct: 204 LLHVPPIRNFFLNP-NTPQLQESARPTE--LVSRLAALTRRLWNPRLFKAQVSPHEFFHE 260
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
V S +F EQ DP++FL W +NTLHR L GT+K++SS++Y TF G ++++T+KI
Sbjct: 261 VTKRSNGKFTTIEQGDPVEFLGWLINTLHRDLGGTRKRNSSVIYTTFQGKVQIETQKI-- 318
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKF 181
+ K R + E SPFL+L DLP PLF+D + IIPQV+L +IL KF
Sbjct: 319 --ITHKDYARPVFEESRDIERMSSPFLFLALDLPATPLFQDANEKKIIPQVSLASILAKF 376
Query: 182 NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD 241
+ ++ +E+ LKR + +LPPYLIL++KRFTKN F EKNPTIVNFP++ VD
Sbjct: 377 DGKTTQEFGPT----LKRHHLQALPPYLILHIKRFTKNNFVEEKNPTIVNFPMRGVDMQP 432
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD-GEPSNGTYRV-HLYHKGIG---K 296
+ P+ + L ESTM A+ D + S +++ +G G +
Sbjct: 433 YVDPKPSDPIMACYDLLSNVVLESTMASTKASGKPDPSDDSTVAWKIFQRAGRGGGESER 492
Query: 297 WYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
WYE+QDL V D+ +M+ L E IQ++E R +P
Sbjct: 493 WYEMQDLRVEDVRREMVPLGETVIQVWERRDLSTPA 528
>gi|310794303|gb|EFQ29764.1| ubiquitin carboxyl-terminal hydrolase [Glomerella graminicola
M1.001]
Length = 535
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 139/341 (40%), Positives = 196/341 (57%), Gaps = 39/341 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR++ L E +R + L +RFG L+RK+WNPR FK+HVSPHE+LQ
Sbjct: 219 ALAHVAPLRNFCLLEDLSSRSE---------LAKRFGILVRKIWNPRAFKAHVSPHELLQ 269
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K++ T QSDP++FLSWFLN LH L G+K K SS+V + F G +KV+++ I
Sbjct: 270 EISLLSNKRYTLTAQSDPVEFLSWFLNNLHLGLGGSKTKPGSSVVQRIFQGKLKVESQAI 329
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+ R R E+ + T S F++LT DLP PLF+DE+ +NIIPQV L TIL
Sbjct: 330 -TARADAGDRLRF---EDAAVSMTTSRFMFLTLDLPAAPLFQDELEKNIIPQVPLTTILA 385
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K++ +E+ + KR+ + LPPYL+L+VKRF++N F E+NPTIV F + +D
Sbjct: 386 KYDGIHAQEHLAQR----KRYRLLHPLPPYLVLHVKRFSQNKFVSERNPTIVTFDPRGLD 441
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVH 288
+ P ++ E YDLVAN+VH D T++V
Sbjct: 442 VSPYVEPN-PGEWPPG---------EPIWYDLVANVVHEAVRAKEDVADSGEERKTWKVQ 491
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTP 329
L KG +W QDL V + +++ L E Y+Q++E R TP
Sbjct: 492 LKDKGRDEWVSCQDLFVEKVQSELLYLGETYLQVWERRRTP 532
>gi|346974195|gb|EGY17647.1| U4/U6.U5 tri-snRNP-associated protein [Verticillium dahliae
VdLs.17]
Length = 549
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 142/350 (40%), Positives = 195/350 (55%), Gaps = 42/350 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+YFL E +R + L +R L+RK+WNPR FK+HVSPHE+LQ
Sbjct: 227 ALSHVVPLRNYFLLEDFSSRSE---------LAKRTSILVRKIWNPRAFKAHVSPHELLQ 277
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDPI+FLSWFLN LH L G+K K SS++++ F G +KV+++ I
Sbjct: 278 QIALDSNKRFTLTNQSDPIEFLSWFLNNLHLGLGGSKTKPGSSMIHRIFQGKLKVESQAI 337
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
RL + S FL LT DLP PLF+DE NIIPQV L TIL
Sbjct: 338 ---TARADAGDRLRFEDAADVHVAVSRFLLLTLDLPAAPLFQDENNRNIIPQVPLTTILA 394
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K++ +E+ + KR+ + LPPYL+++VKRF++N F E+NPTIV F +N+D
Sbjct: 395 KYDGRHAQEHLAQR----KRYRLLHPLPPYLVMHVKRFSQNKFVSERNPTIVTFDARNLD 450
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD-------------GEPSNGTY 285
+ P A++ E YDLVAN+VH+ GE T+
Sbjct: 451 MAPYVEPN-PAEHPPG---------EPIWYDLVANVVHEAVRARREDVADAVGE-ERKTW 499
Query: 286 RVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTAMS 335
+V L KG +W QDL V + +++ L E Y+Q++E R TP A +
Sbjct: 500 KVQLKDKGRDEWVVCQDLFVDKVQSELLYLGETYLQVWERRRTPKGKARA 549
>gi|358392285|gb|EHK41689.1| hypothetical protein TRIATDRAFT_32182 [Trichoderma atroviride IMI
206040]
Length = 546
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 138/343 (40%), Positives = 196/343 (57%), Gaps = 40/343 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV+PLR+Y L E ++++ +V+R L RK+WNPR FKSHVSPHE+LQ
Sbjct: 225 ALSHVSPLRNYLLLE-DFSKKSE--------IVKRCSILFRKIWNPRAFKSHVSPHELLQ 275
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDP++FLSWFLN LH L G+K K SS++ +TF G +KV+++ I
Sbjct: 276 EIALLSNKRFTLTNQSDPVEFLSWFLNNLHLGLGGSKTKPGSSMIQRTFQGKLKVESQAI 335
Query: 120 PPVELEEKVRQRLLLTEEYKETETE-SPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
+ R R EE E + + FL+LT DLP PLF+DE+ +NIIPQV L TIL
Sbjct: 336 -TARADAGDRLRF---EEAGEVKVDIVRFLFLTLDLPSAPLFQDELEKNIIPQVPLSTIL 391
Query: 179 TKFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNV 237
+K++ + +E+ + KR+ + LPPYL+ +VKRF++N F E+NPTIV F +N+
Sbjct: 392 SKYDGKRAQEHHAQR----KRYRLLHPLPPYLMFHVKRFSQNKFVAERNPTIVTFDARNL 447
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRV 287
D + P E YDLVAN+VH D T++
Sbjct: 448 DISPYVEPNPNEWPVG----------EPIWYDLVANVVHESVRKKEDVADSGEEKKTWKA 497
Query: 288 HLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
+ K G+W QDL V + +++ L E Y+QI+E R P+
Sbjct: 498 QIKDKATGEWVVCQDLFVDKVQSELLYLGETYLQIWERRKVPA 540
>gi|302416643|ref|XP_003006153.1| U4/U6.U5 tri-snRNP-associated protein [Verticillium albo-atrum
VaMs.102]
gi|261355569|gb|EEY17997.1| U4/U6.U5 tri-snRNP-associated protein [Verticillium albo-atrum
VaMs.102]
Length = 549
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 141/344 (40%), Positives = 193/344 (56%), Gaps = 42/344 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+YFL E +R + L +R L+RK+WNPR FK+HVSPHE+LQ
Sbjct: 227 ALSHVVPLRNYFLLEDFSSRSE---------LAKRTSILVRKIWNPRAFKAHVSPHELLQ 277
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDPI+FLSWFLN LH L G+K K SS++++ F G +KV+++ I
Sbjct: 278 QIALDSNKRFTLTNQSDPIEFLSWFLNNLHLGLGGSKTKPGSSMIHRIFQGKLKVESQAI 337
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
RL + S FL LT DLP PLF+DE NIIPQV L TIL
Sbjct: 338 ---TARADAGDRLRFEDAADVHVAVSRFLLLTLDLPAAPLFQDENNRNIIPQVPLTTILA 394
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K++ +E+ + KR+ + LPPYL+++VKRF++N F E+NPTIV F +N+D
Sbjct: 395 KYDGRHAQEHLAQR----KRYRLLHPLPPYLVMHVKRFSQNKFVSERNPTIVTFDARNLD 450
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD-------------GEPSNGTY 285
+ P A++ E YDLVAN+VH+ GE T+
Sbjct: 451 MAPYVEPN-PAEHPPG---------EPIWYDLVANVVHEAVRARREDVADAVGE-ERKTW 499
Query: 286 RVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTP 329
+V L KG +W QDL V + +++ L E Y+Q++E R TP
Sbjct: 500 KVQLKDKGRDEWVVCQDLFVDKVQSELLYLGETYLQVWERRRTP 543
>gi|19112097|ref|NP_595305.1| ubiquitin C-terminal hydrolase Ubp10 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74638873|sp|Q9USR2.1|UBP10_SCHPO RecName: Full=Probable mRNA-splicing protein ubp10; AltName:
Full=Probable inactive ubiquitin-specific-processing
protease 10
gi|5830507|emb|CAB54815.1| ubiquitin C-terminal hydrolase Ubp10 (predicted)
[Schizosaccharomyces pombe]
Length = 502
Score = 233 bits (595), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 135/330 (40%), Positives = 195/330 (59%), Gaps = 33/330 (10%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P R+YFL + N+ D+ LVQR L+RKLWN + FKSHVSP E++Q
Sbjct: 196 LAHVKPFRNYFLLK-NF--------DNCPQLVQRLAILIRKLWNHKAFKSHVSPQELIQE 246
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK---KDSSIVYKTFLGSMKVKTRK 118
V + S K++ EQ DP++FLSWFLNTLH L G K K +SIV+ +F G ++++++K
Sbjct: 247 VTVLSHKKYSINEQKDPVEFLSWFLNTLHNCLGGKKSTIAKPTSIVHYSFQGFVRIESQK 306
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + EK Q + + +T PFLYLT DLPP P+F+DE NIIPQV L IL
Sbjct: 307 IR--QHAEKGEQVVFTGDRVIQTNV-VPFLYLTLDLPPKPIFQDEFEGNIIPQVELKEIL 363
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K+N +E + +RF + + PPY I ++KRF KN +F E+N TIV FP+ + D
Sbjct: 364 NKYNGVHTQELAGMR----RRFHLMTAPPYFIFHIKRFMKNNYFTERNQTIVTFPLDDFD 419
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD----GEPSNGTYRVHLYHKGI 294
++P + + + + ST Y+LVANI+H+ E +R+ + +
Sbjct: 420 ----MSPFIDDSFIQSNPKI------STKYNLVANIIHESVTHAEEEFHNFRIQIRNPST 469
Query: 295 GKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
KWY+IQDL+V +I MI L E++IQ++E
Sbjct: 470 NKWYQIQDLYVEEISSDMIRLGESFIQLWE 499
>gi|116206416|ref|XP_001229017.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183098|gb|EAQ90566.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 552
Score = 233 bits (595), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 145/350 (41%), Positives = 194/350 (55%), Gaps = 41/350 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+YFL E ++ S+ LV+R L RK+WNPR FKSHVSPHE+LQ
Sbjct: 219 ALSHVAPLRNYFLLE-DFT--------SAPELVKRTSILFRKIWNPRAFKSHVSPHELLQ 269
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDP++FLSWFLN LH L G+K K SS + + F G +KV+++ I
Sbjct: 270 EISLRSNKRFTLTAQSDPVEFLSWFLNHLHLGLGGSKTKPGSSPIQRIFQGKLKVESQSI 329
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+ + RL E + FL LT DLPP PLF+DE NIIPQV L TIL
Sbjct: 330 --TARGDGLNDRLRFEEASDAKTDIARFLLLTLDLPPAPLFQDEQERNIIPQVPLATILA 387
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K+N + +E + KR+ + LPP+LIL++KRF++N F E+NPTIV F +N+D
Sbjct: 388 KYNGVTGQELNAQR----KRYRLMHPLPPFLILHIKRFSQNKFVSERNPTIVTFDPRNLD 443
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD-------------GEPSNGTY 285
+ P+ E YDLVAN+VH+ GE T+
Sbjct: 444 VSPYVEPDPAHCPPG----------EPVWYDLVANVVHEAVRAKEDVADSAVGE-ERKTW 492
Query: 286 RVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTAMS 335
+V L K +W QDL V I +++ L E+Y+QI+E R P P S
Sbjct: 493 KVQLRDKATDEWVVAQDLFVDKIRSELLYLGESYLQIWERRRGPPPRQQS 542
>gi|290974377|ref|XP_002669922.1| predicted protein [Naegleria gruberi]
gi|284083475|gb|EFC37178.1| predicted protein [Naegleria gruberi]
Length = 477
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/325 (38%), Positives = 200/325 (61%), Gaps = 35/325 (10%)
Query: 1 ALCHVTPLRDYFL-REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
AL + P+RD+FL + N ++VK S LL F EL+RK+WNP+NFK+HV+P E +
Sbjct: 183 ALTRIKPVRDFFLLDQKNLSKVKS----RSVLL---FSELLRKIWNPKNFKNHVNPLEFV 235
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKI 119
Q++ L + KQF+ E DP+ F +W LN LH L + K SI+ ++F G + + ++ I
Sbjct: 236 QSI-LSNAKQFKLGESIDPVQFFTWLLNYLHGELTDNQPKQKSIISESFRGRITITSKVI 294
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+ ++++ E ++ +PF++LT D+P P+FKDE NI+PQV+L+++L+
Sbjct: 295 KRKKSGGADKKQV----EETTSQNTTPFMFLTLDVPSAPIFKDEYERNILPQVSLFSLLS 350
Query: 180 KFNNESEKEYKTYKENF-LKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
KFN E E N +++++I LPPYL+ +VKRF+KN FF EKN TIVNFP+ N+D
Sbjct: 351 KFNGEKETAVPLNDGNVEMRKYKIEKLPPYLVFHVKRFSKNFFFEEKNNTIVNFPLNNLD 410
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWY 298
+I P+ Y + Y+LVANI HDG Y++H+++ GKWY
Sbjct: 411 ISEI-APD----------------YSGSHYNLVANICHDG----SVYKIHVHNVAEGKWY 449
Query: 299 EIQDLHVTDILPQMITLTEAYIQIY 323
EIQDL V +++ + ++++++++ +Y
Sbjct: 450 EIQDLDVKEVIAEEVSISQSFLLVY 474
>gi|451998697|gb|EMD91161.1| hypothetical protein COCHEDRAFT_1137659 [Cochliobolus
heterostrophus C5]
Length = 551
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 139/337 (41%), Positives = 192/337 (56%), Gaps = 37/337 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+YF+ E R + L QRF L+RK+WNPR FK+HVSPHE+LQ
Sbjct: 227 ALSHVVPLRNYFMLEDLSNRPQ---------LAQRFSTLVRKIWNPRAFKTHVSPHELLQ 277
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T+QSDP+DFLSWFLN LH A+ G++ K SSI+ K F G++K++ ++I
Sbjct: 278 EIALRSSKRFTLTDQSDPVDFLSWFLNNLHLAVGGSRTKPHSSIIQKVFQGTLKIEQQEI 337
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
RL + +T T S FL LT DLP PLF+D + +NIIPQV L IL+
Sbjct: 338 ---TARADAGDRLRFEDAAVQT-TTSHFLVLTLDLPAAPLFQDALEKNIIPQVPLVNILS 393
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
K+N + +E +N ++ + LPPYL+ +KRF+KN F E+NPTIV FPV ++D
Sbjct: 394 KYNGVTPQE---KSKNRVRYRLVHPLPPYLLFNIKRFSKNKFVSERNPTIVTFPVHSLDM 450
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVHL 289
+ P A Y + YDLVANI H +GE + +RV +
Sbjct: 451 SPYVEPN-PAHYPPG---------QPIWYDLVANITHEAVKKKDDSVEGELESKIWRVQV 500
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
+ +WY IQDL V + + EAY+ ++E R
Sbjct: 501 KDRARDEWYGIQDLFVEKERAETLFTKEAYLMVWERR 537
>gi|350582197|ref|XP_003354795.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Sus scrofa]
Length = 431
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 119/187 (63%), Positives = 143/187 (76%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEK 187
FN +EK
Sbjct: 422 FNGITEK 428
>gi|340904868|gb|EGS17236.1| ubiquitin thiolesterase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 557
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 143/346 (41%), Positives = 196/346 (56%), Gaps = 45/346 (13%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV+PLR++FL E +++ LV+R L RK+WNPR FK+HVSPHE+LQ
Sbjct: 229 ALSHVSPLRNFFLLE-DFSNAPE--------LVKRTSILFRKIWNPRAFKAHVSPHELLQ 279
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
V L S K+F T QSDP+DFLSW+LN LH L G+K K SS+V + F G +KV+++ I
Sbjct: 280 EVSLCSNKRFTLTAQSDPVDFLSWYLNNLHLGLGGSKTKPQSSVVQRIFQGKLKVESQAI 339
Query: 120 PPVELEEKVRQRLLLTEEYKETETE-SPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
+ R R EE E + + + FL LT DLPP PLF+DE NIIPQV L T+L
Sbjct: 340 -TARADHLDRLRF---EEATEIKVDIARFLLLTLDLPPAPLFQDEQERNIIPQVPLTTLL 395
Query: 179 TKFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNF-PVKN 236
K+N + +E + KR+ + LPP+L+L++KRFTKN F E+NPTIV F P
Sbjct: 396 AKYNGVTAQELNAQR----KRYRLMHPLPPFLLLHIKRFTKNRFIAERNPTIVVFDPRSG 451
Query: 237 VDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD-------------GEPSNG 283
+D + P+ E +YDLVAN+VH+ GE
Sbjct: 452 LDISPYVEPDPSQHPPD----------EPIIYDLVANVVHEAVRAKEDVADSAVGE-QRK 500
Query: 284 TYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTP 329
++V L K G+W QDL V +++ L E+Y+Q++E R TP
Sbjct: 501 AWKVQLRDKATGEWVVAQDLFVEKAQAELLYLGESYLQVWERRKTP 546
>gi|431899736|gb|ELK07687.1| U4/U6.U5 tri-snRNP-associated protein 2 [Pteropus alecto]
Length = 646
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 119/187 (63%), Positives = 143/187 (76%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK +IV F GSM++ T+K+P
Sbjct: 302 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP 361
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+L + +++LL +EY+ET ES F+YLT DLP PL+KDE + IIPQV L+ IL K
Sbjct: 362 HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK 421
Query: 181 FNNESEK 187
FN +EK
Sbjct: 422 FNGITEK 428
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/140 (65%), Positives = 110/140 (78%), Gaps = 12/140 (8%)
Query: 187 KEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPE 246
+EYKTYKENFLKRF++T LPPYLI +KRFTKN FFVEKNPTIVNFP+ NVD + L+ E
Sbjct: 509 QEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEE 568
Query: 247 VKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVT 306
V+A ++ T YDL+ANIVHDG+PS G+YR+H+ H G GKWYE+QDL VT
Sbjct: 569 ------------VQAVHKHTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVT 616
Query: 307 DILPQMITLTEAYIQIYELR 326
DILPQMITL+EAYIQI++ R
Sbjct: 617 DILPQMITLSEAYIQIWKRR 636
>gi|398395581|ref|XP_003851249.1| hypothetical protein MYCGRDRAFT_110099 [Zymoseptoria tritici
IPO323]
gi|339471128|gb|EGP86225.1| hypothetical protein MYCGRDRAFT_110099 [Zymoseptoria tritici
IPO323]
Length = 533
Score = 230 bits (586), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 200/347 (57%), Gaps = 40/347 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HVTPLR++ + E +R + LVQRF L+RK+WN + FKSHVSPHE++Q
Sbjct: 213 ALSHVTPLRNFLMLEDLSSRPQ---------LVQRFSVLVRKIWNSKAFKSHVSPHELIQ 263
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD-SSIVYKTFLGSMKVKTRKI 119
V L S K+F TEQ+DP+DFLSWFLN LH +L G+K K SS+V K F G+++++++ I
Sbjct: 264 EVALRSNKKFLLTEQADPVDFLSWFLNNLHLSLGGSKTKSHSSLVQKIFQGTLRIESQSI 323
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
RL + SPF+ LT DLPP PLF+D+V +NIIPQV+L T+L
Sbjct: 324 ---SARADAGDRLRFEDAGVIKSQTSPFMILTLDLPPAPLFQDDVEKNIIPQVSLTTVLQ 380
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFF-VEKNPTIVNFPVKNV 237
K+N + +E + N R+ + LPP+LI++VKRF N F ++NPTIV F +++
Sbjct: 381 KYNGITAQE----RLNTRMRYRLQHPLPPFLIMHVKRFASNKFLQAQRNPTIVTFNPRSL 436
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRV 287
D + P+ K + E +YDLVAN+ + +GE ++
Sbjct: 437 DMSPYVEPDPK----------IHPIGEPLVYDLVANVTYEGVKVRDDSVEGEAERKMWKC 486
Query: 288 HLYHKG-IGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTA 333
+ G G W+E+QDL+V + ++++ E+Y+ ++E R T A
Sbjct: 487 QVKEGGENGGWWEMQDLYVERVDAELLSTKESYVMVWERRRTKKGKA 533
>gi|367024425|ref|XP_003661497.1| hypothetical protein MYCTH_2300970 [Myceliophthora thermophila ATCC
42464]
gi|347008765|gb|AEO56252.1| hypothetical protein MYCTH_2300970 [Myceliophthora thermophila ATCC
42464]
Length = 557
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 193/342 (56%), Gaps = 43/342 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR++FL E +++ S+ LV+R L RK+WNPR FK+HVSPHE+LQ
Sbjct: 228 ALSHVAPLRNFFLLE-DFS--------SAPELVKRTSILFRKIWNPRAFKAHVSPHELLQ 278
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
V L S K+F T QSDP+DFLSWFLN LH L G+K K SS + + F G +KV+++ I
Sbjct: 279 EVSLRSNKRFTLTAQSDPVDFLSWFLNNLHLGLGGSKTKPGSSPIQRIFQGKLKVESQAI 338
Query: 120 PPVELEEKVRQRLLLTEEYKETETE-SPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
R R EE E +T+ + FL LT DLPP PLF+DE NIIPQV L TIL
Sbjct: 339 TARTDTHDDRLRF---EEASEIKTDIARFLLLTLDLPPAPLFQDEEQRNIIPQVPLTTIL 395
Query: 179 TKFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNV 237
K+N + +E + KR+ + LPP+LIL+VKRF++N F E+NPTIV F N+
Sbjct: 396 AKYNGVTSQELNAQR----KRYRLVHPLPPFLILHVKRFSRNRFVSERNPTIVTFDPHNL 451
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD-------------GEPSNGT 284
D + P+ E YDLVAN+VH+ GE T
Sbjct: 452 DVSPYVEPDPA----------YHPPGEPIWYDLVANVVHEAVRAKEDVADSAVGE-ERKT 500
Query: 285 YRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
++V L K +W QDL V I +++ L E Y+Q++E R
Sbjct: 501 WKVQLRDKATDEWVVAQDLFVDKIRSELLYLGETYLQVWERR 542
>gi|346325327|gb|EGX94924.1| U4/U6.U5 tri-snRNP-associated protein 2 [Cordyceps militaris CM01]
Length = 554
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 193/348 (55%), Gaps = 39/348 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+Y L + + + LV+R L RK+WNPR FKSHVSPHE+LQ
Sbjct: 230 ALSHVAPLRNYLLLDDFSGKSE---------LVKRCSILFRKIWNPRAFKSHVSPHELLQ 280
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDP+DFLSWFLN LH L G+K + SS+V + G +KV+++ I
Sbjct: 281 EIALRSNKRFTLTAQSDPVDFLSWFLNYLHLGLGGSKTRPGSSMVQRALQGRLKVESQAI 340
Query: 120 PPVELEEKVRQRLLLTEEYKETETE-SPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
+ R R E+ E + + FL LT DLPP PLF+DE+ NIIPQV L +L
Sbjct: 341 -TARADAGDRLRF---EDAGEVKVDIVRFLLLTLDLPPAPLFQDELERNIIPQVPLAAVL 396
Query: 179 TKFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNV 237
K++ S +E+ + KR+ + LPPYL L+VKRF++N F E+NPTIV F +
Sbjct: 397 AKYDGRSAQEHHAQR----KRYRLLHPLPPYLALHVKRFSQNKFVAERNPTIVTFDARG- 451
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRV 287
G L P V+ ++ E YDLVAN+VH D T++V
Sbjct: 452 --GLDLAPYVEPCPDAW------PPGEPIWYDLVANVVHEAVHTKEDVADTGEERRTWKV 503
Query: 288 HLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTAMS 335
L K G+W QDL V + +++ L E+Y+QI+E R P+ S
Sbjct: 504 QLRDKATGEWVVAQDLFVDKVQSELLYLGESYLQIWERRREPAGKGKS 551
>gi|345567454|gb|EGX50386.1| hypothetical protein AOL_s00076g150 [Arthrobotrys oligospora ATCC
24927]
Length = 571
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 140/352 (39%), Positives = 197/352 (55%), Gaps = 50/352 (14%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HVTPLR+Y + E +R + L QRF L+RK+WN R F+ HVSPHE+LQ
Sbjct: 253 ALAHVTPLRNYMMLENMSSRPE---------LAQRFSILVRKIWNSRAFRGHVSPHELLQ 303
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDP++FLSWF+N LH +L G+K SSIV K F G ++V+++ I
Sbjct: 304 EISLRSSKKFTLTTQSDPVEFLSWFVNNLHLSLGGSKTAPGSSIVQKVFQGRLRVESQAI 363
Query: 120 PPVELEEKVRQRLLLTEEYKETETE-SPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
+ + R R EE E +T+ ++ LT +LPP PLF+DE+ +NIIPQV L IL
Sbjct: 364 -TAKADASDRLRF---EEAGEVKTDMHRYMMLTLELPPAPLFQDELDKNIIPQVPLTAIL 419
Query: 179 TKFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNV 237
+K++ +E + KR+++ LPPYL+ ++KRF+KN F EKNPTIV FP ++
Sbjct: 420 SKYDGTRAQELLGQR----KRYKLLQPLPPYLVFHIKRFSKNKFVFEKNPTIVTFPSTSL 475
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD-----GEPS---------NG 283
D M + YDL ANIVH+ G PS
Sbjct: 476 D----------------MSPYAEGATGPIWYDLTANIVHESVARKGGPSGVKSEAGEEGH 519
Query: 284 TYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTAMS 335
Y+V L K +W ++QDL V +I +++ L E+YIQ++E R A S
Sbjct: 520 AYKVQLKDKARDEWVQVQDLIVEEIRKEILFLGESYIQVWERRRDTKKKAAS 571
>gi|396457844|ref|XP_003833535.1| similar to U4/U6.U5 tri-snRNP-associated protein [Leptosphaeria
maculans JN3]
gi|312210083|emb|CBX90170.1| similar to U4/U6.U5 tri-snRNP-associated protein [Leptosphaeria
maculans JN3]
Length = 554
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 143/337 (42%), Positives = 196/337 (58%), Gaps = 37/337 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+YF+ E +R + L QRF L+RK+WNPR FK+HVSPHE+LQ
Sbjct: 238 ALAHVVPLRNYFMLEDLSSRPQ---------LAQRFSTLVRKIWNPRAFKTHVSPHELLQ 288
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F +EQSDP+DFLSWFLN LH A+ G+K K SSI+ K F G++K+++++I
Sbjct: 289 EIALRSSKRFSLSEQSDPVDFLSWFLNNLHLAVGGSKTKPGSSIIQKVFQGTLKIESQEI 348
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
RL + +TET S FL LT DLP PLF+D + +NIIPQV L IL+
Sbjct: 349 ---TARADAGDRLRFEDAAVKTET-SRFLILTLDLPSAPLFQDALEKNIIPQVPLVNILS 404
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
K+N + +E +N ++ + LPPYL+ +KRF+KN F E+NPTIV FPV ++D
Sbjct: 405 KYNGVTPQE---KMKNRVRYRLLHPLPPYLLFNIKRFSKNKFVSERNPTIVTFPVHSLDM 461
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVHL 289
+ P K +Y E YDLVANI H +GE +RV L
Sbjct: 462 APYVEPNPK-EYPPG---------EPIYYDLVANITHEAVKSRDDSVEGEQERRVWRVQL 511
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
+ +WY IQDL+V + + EAY+ ++E R
Sbjct: 512 KDRARDEWYGIQDLYVEKERGETLFTKEAYVMVWERR 548
>gi|384497015|gb|EIE87506.1| hypothetical protein RO3G_12217 [Rhizopus delemar RA 99-880]
Length = 391
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 121/242 (50%), Positives = 164/242 (67%), Gaps = 14/242 (5%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL H+ P+RDYF+ + A+ S LV RF L+RK+WNPR FK VSPHE++Q
Sbjct: 163 ALAHIPPIRDYFILQDFEAK-------GSSQLVCRFSALVRKIWNPRAFKGQVSPHELVQ 215
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+ SRK+F+ TEQS+ IDFLSWFLNTLH+ L GTKKK+SSI+Y+ F G +KV++++ P
Sbjct: 216 EISNASRKRFKLTEQSNAIDFLSWFLNTLHKDLGGTKKKNSSIIYQYFQGEVKVESQE-P 274
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+ E+ + T T SPFL+L DLPP PL++DE +I+PQV L TIL+K
Sbjct: 275 GLPTEKDALAK--FNPNRAITTTTSPFLFLALDLPPVPLYQDERERDIVPQVPLTTILSK 332
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
F+ + +E N LKR+ IT LP +LIL++KRFTKN++ EKNPTIVNFP+KN+D
Sbjct: 333 FDGKRVQEV----SNQLKRYSITRLPQFLILHIKRFTKNSWTNEKNPTIVNFPIKNIDMS 388
Query: 241 DI 242
+
Sbjct: 389 NC 390
>gi|406863087|gb|EKD16135.1| U4/U6.U5 tri-snRNP-associated protein 2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 928
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 143/340 (42%), Positives = 198/340 (58%), Gaps = 40/340 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+Y L E ++++ LV+R L+RK+WNPR FKSHVSPHE+LQ
Sbjct: 602 ALSHVPPLRNYLLLE-DFSKAPE--------LVKRLSILVRKIWNPRAFKSHVSPHELLQ 652
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDP+DFLSWFLN LH AL G+K K SS+V + F G +KV+++ I
Sbjct: 653 EISLKSNKKFTLTTQSDPVDFLSWFLNNLHLALGGSKTKPGSSMVQRVFQGKLKVESQAI 712
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+ RL E + F++LT DLP PLF+DE+ NIIPQV L +IL+
Sbjct: 713 ---TAKADAGDRLRFEEAASVQTDVNRFMFLTLDLPAAPLFQDELDANIIPQVPLTSILS 769
Query: 180 KFNNESEKEYKTYKENFLKRFE-ITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K++ +E+ N KR+ + LPP+L+ +VKRF+KN F E+NPTIV F +N+D
Sbjct: 770 KYDGRQAQEHL----NMRKRYRLLHPLPPFLLFHVKRFSKNKFVEERNPTIVTFDARNLD 825
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH-------DGEPSNG-----TYR 286
+ P+ K V A E YDLVANIVH D E + G +++
Sbjct: 826 LSPYVEPDPK----------VHAMGEPIWYDLVANIVHEAVRGKEDVEGAAGGEVGRSWK 875
Query: 287 VHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
L K G W E+QDL V + +++ L E+Y+Q++E R
Sbjct: 876 CQLLDKARGGWSEMQDLFVKEAPKELLYLGESYLQVWERR 915
>gi|452837730|gb|EME39672.1| hypothetical protein DOTSEDRAFT_75352 [Dothistroma septosporum
NZE10]
Length = 543
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 135/340 (39%), Positives = 198/340 (58%), Gaps = 41/340 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRD+ + E +R + LV+RF ++RK+WNP++FKSHVSPHE++Q
Sbjct: 223 ALSHVRPLRDFLMLEDLSSRPE---------LVKRFSVMVRKIWNPKSFKSHVSPHELIQ 273
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F TEQ+DP+DFLSWFLN LH AL G+K K SS+V K F GS++V+++ I
Sbjct: 274 EIALRSNKKFLLTEQADPVDFLSWFLNNLHLALGGSKTKPRSSLVQKIFQGSLRVESQAI 333
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
RL + +++T SPF+ LT DLPP PLF+D+V +NIIPQV L T+L
Sbjct: 334 ---SARADAGDRLRFEDADIKSQT-SPFMILTLDLPPAPLFQDDVEKNIIPQVPLTTVLQ 389
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFF-VEKNPTIVNFPVKNV 237
K+N + +E + N R+ + LPPYL+++VKRF N F ++NPTIV F + +
Sbjct: 390 KYNGITGQE----RMNTRVRYRLQHPLPPYLVMHVKRFQPNKFLQSQRNPTIVTFNPRAL 445
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRV 287
D + P+ K + A E +YDLVANI + +GE ++
Sbjct: 446 DMSPYVQPDPK----------LHATGEPIIYDLVANITYEGVKVRDDSVEGEAERKVWKA 495
Query: 288 HLYHKG-IGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
+ +W+E+QDL V + ++ E+Y+ I+E R
Sbjct: 496 QVKEGADSNQWWEMQDLFVEKVNADLLATKESYVMIWERR 535
>gi|171693595|ref|XP_001911722.1| hypothetical protein [Podospora anserina S mat+]
gi|170946746|emb|CAP73550.1| unnamed protein product [Podospora anserina S mat+]
Length = 547
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 144/354 (40%), Positives = 195/354 (55%), Gaps = 45/354 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L HV+PLR+YFL E R + LV+R L RK+WNPR FKSHVSPHE+LQ
Sbjct: 215 SLSHVSPLRNYFLLEDLSKRDE---------LVKRTSILFRKIWNPRAFKSHVSPHELLQ 265
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDP++FLSW+LN LH L G+K+K SS + G +KV+++ I
Sbjct: 266 EISLRSNKRFTLTAQSDPVEFLSWYLNNLHLGLGGSKRKPHSSPIQHILQGKLKVESQAI 325
Query: 120 PPVELEEKVRQRLLLTEEYKETETE-SPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
+ + R R EE + +T+ S FL LT DLPP PLF+DE NIIPQV L +L
Sbjct: 326 -TAKADASDRLRF---EESAQVQTDISRFLLLTLDLPPAPLFQDEQEANIIPQVPLSLLL 381
Query: 179 TKFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNV 237
K+N +E + KR+ + LPP+L+ +VKRF+KN F E+NPTIV F +N+
Sbjct: 382 AKYNGVKAQELNAQR----KRYRLMHPLPPFLVFHVKRFSKNKFVSERNPTIVTFDARNL 437
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD-------------GEPSNGT 284
D G + P+ E YDLVAN+VH+ GE T
Sbjct: 438 DVGPYVEPDPSHCQPG----------EPIWYDLVANVVHEAVRQKEDVADSAVGEEKK-T 486
Query: 285 YRVHLYHKGI-GKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTAMSEG 337
++V L K G+W QDL V I +++ L E Y+Q++E R P S G
Sbjct: 487 WKVQLRDKSREGEWVVAQDLFVEKIREELLYLGETYLQVWERRDRPKVQGGSNG 540
>gi|145507031|ref|XP_001439476.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406660|emb|CAK72079.1| unnamed protein product [Paramecium tetraurelia]
Length = 447
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/325 (37%), Positives = 191/325 (58%), Gaps = 32/325 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
ALC + PLR+ F+ + + + P D + LL QRF EL RK+WNPRN+K HVSPHE+LQ
Sbjct: 150 ALCRIKPLRN-FMIFLQFQKSATEPFDYNCLLSQRFSELTRKIWNPRNYKGHVSPHELLQ 208
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV L S KQF+ +QSDP+ + WFL+ L + L K + +I+ F G ++ + K
Sbjct: 209 AVTLKSNKQFKIGQQSDPMHLIIWFLDNLKKELLHINKIN-TIISDCFQGELQYEWYK-- 265
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
L+ + + + E K F YL+ DLP PL KD + +IP +++ ++ K
Sbjct: 266 --PLKNAIGYQPIPIIEQKS------FFYLSLDLPSTPLQKDGSQKALIPSISIQELIKK 317
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
++ + + + +R+ IT P YLI+++KRF KN FF+EKNPTIV FP+ ++D
Sbjct: 318 YDGFTNTDSADGR----RRYTITKFPKYLIIHMKRFIKNNFFMEKNPTIVTFPLNDLDLS 373
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
L E ++ Y+L+ANI H+G G Y++H+ ++ +W++I
Sbjct: 374 QCLNLE----------------QQNVKYNLIANICHEGTAKVGIYKIHVKNEANNQWFQI 417
Query: 301 QDLHVTDILPQMITLTEAYIQIYEL 325
QDLH +I+PQ+I+++EAY+QIYEL
Sbjct: 418 QDLHKQNIVPQLISVSEAYVQIYEL 442
>gi|353237014|emb|CCA68997.1| related to SAD1-SnRNP assembly defective [Piriformospora indica DSM
11827]
Length = 569
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/337 (39%), Positives = 190/337 (56%), Gaps = 38/337 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV +RD L NY + S L+ RF L +KLWN FK+ VSPHE LQ
Sbjct: 239 ALLHVPLIRDPLLAS-NYT-------NKSTQLLIRFATLAKKLWNSHLFKAQVSPHEFLQ 290
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK-I 119
V S +F +Q DP++FL W LN LH+ GTK+++SS++Y F G +++ T++ I
Sbjct: 291 EVTRVSAGKFGIMKQGDPVEFLGWLLNALHKDAGGTKRRNSSMIYSAFQGELRLDTQQVI 350
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEV-LENIIPQVNLYTIL 178
EL V R + + SPFL+L DLPPPPLF+D + +NIIPQV++Y +L
Sbjct: 351 VKDELSGHVNARPEFDIDREIKSNRSPFLFLAIDLPPPPLFQDAIEAKNIIPQVSIYQVL 410
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K++ + +EY LKRF+ LPPY+IL+ KRFTKN F EKNPTIVNFP+K +D
Sbjct: 411 AKYDGSTAQEYVGQ----LKRFKCQRLPPYIILHFKRFTKNNFVEEKNPTIVNFPLKGLD 466
Query: 239 FGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG------EPSNGTYRVHLYH 291
F + + P + K+ +T Y+L+ANI H+ + N +++ L
Sbjct: 467 FREYVDIPPEEKKFPTT-------------YNLLANITHESTAGTARDKENTAWKITLRG 513
Query: 292 KGIG----KWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+ +WY IQDL V + +MI L E +Q++E
Sbjct: 514 PAVAGDEEQWYSIQDLIVQKVQREMIFLGETVLQVWE 550
>gi|389634977|ref|XP_003715141.1| U4/U6.U5 tri-snRNP-associated protein 2 [Magnaporthe oryzae 70-15]
gi|351647474|gb|EHA55334.1| U4/U6.U5 tri-snRNP-associated protein 2 [Magnaporthe oryzae 70-15]
gi|440475631|gb|ELQ44300.1| U4/U6.U5 tri-snRNP-associated protein 2 [Magnaporthe oryzae Y34]
gi|440480835|gb|ELQ61476.1| U4/U6.U5 tri-snRNP-associated protein 2 [Magnaporthe oryzae P131]
Length = 563
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 197/346 (56%), Gaps = 46/346 (13%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR++FL E S LV+R L RK+WNPR FK+HVSPHE+LQ
Sbjct: 240 ALAHVPPLRNFFLLE--------DLSQSQSELVRRTATLFRKIWNPRAFKAHVSPHELLQ 291
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
V L S K+F T QSDP+DFLSWFLN LH L G++ K SS+V + F G +KV+++ I
Sbjct: 292 EVSLRSNKRFTLTAQSDPVDFLSWFLNNLHLGLGGSRTKPGSSMVQRVFQGKVKVESQAI 351
Query: 120 -PPVELEEKVRQRLLLTEEYKETETE---SPFLYLTCDLPPPPLFKDEVLE-NIIPQVNL 174
+ ++++R +++ E + S FL LT DLPP PLF+D+ E +IIPQV L
Sbjct: 352 TAKADADDRLR--------FEDAEVKVDVSRFLLLTLDLPPAPLFQDDDEERSIIPQVAL 403
Query: 175 YTILTKFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFP 233
TI+ K++ S +E+ ++ +R+ + LPPYL+L+VKRF++N F E+NPTIV F
Sbjct: 404 TTIMAKYDGVSAQEHMNHR----RRYRLMHPLPPYLVLHVKRFSQNKFVSERNPTIVTFD 459
Query: 234 VKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNG 283
+ +D + P+ A E +Y+LVAN+VH D
Sbjct: 460 PETLDVSPYVEPDPNHH---------PATGEPIIYELVANVVHEAVKAKDDVADSSEERK 510
Query: 284 TYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTP 329
T++V L + +W QDL V I +++ L E Y+Q++E + P
Sbjct: 511 TWKVQLRDRARDEWIVCQDLFVDKIRGELLYLGETYLQVWERKRDP 556
>gi|146186096|ref|XP_001470681.1| ubiquitin specific protease 39 and snrnp assembly factor
[Tetrahymena thermophila]
gi|146143168|gb|EDK31265.1| ubiquitin specific protease 39 and snrnp assembly factor
[Tetrahymena thermophila SB210]
Length = 529
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/324 (39%), Positives = 191/324 (58%), Gaps = 35/324 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
ALC + LR+ +R N V + D L+ +RF L++K+WNPRNFK VSPHE+LQ
Sbjct: 237 ALCRIPVLRNQIIRFNN--TVNQDVFDLKTLISKRFSNLVKKIWNPRNFKGQVSPHELLQ 294
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
A+VL S+K+F EQSDPI LSW LN + L+ T K+ ++ + F G +++ T
Sbjct: 295 AIVLKSKKKFTINEQSDPIKLLSWLLNNIQSELSNTNYKN--LIDECFKGEVEIHT--YT 350
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P+ Q + E E + PF+YLT ++PPPPL KD+ + IP+ L+ +L K
Sbjct: 351 PL-------QNQIGYSSVPEIENK-PFIYLTLNIPPPPLHKDDHKKINIPEQPLFNLLKK 402
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
F+ + + Y+ K + I LP YLIL+++RFT N +++EKNPTIV FP+ N+D
Sbjct: 403 FDGITTHDNPKYR----KTYRIKKLPKYLILHMERFTFNKYYLEKNPTIVRFPLNNLDLK 458
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ + +S Y+L+ NI H+G GTY++H+ +K W+EI
Sbjct: 459 GYID-----------------EGKSLRYNLLVNICHEGTAKAGTYKIHVRNKANNTWFEI 501
Query: 301 QDLHVTDILPQMITLTEAYIQIYE 324
QDL++T +LPQ I+++EAYIQIYE
Sbjct: 502 QDLYITQVLPQRISVSEAYIQIYE 525
>gi|405123054|gb|AFR97819.1| biquitin thiolesterase/zinc ion binding protein [Cryptococcus
neoformans var. grubii H99]
Length = 562
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 139/373 (37%), Positives = 206/373 (55%), Gaps = 68/373 (18%)
Query: 2 LCHVTPLRDYFLR-EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L HV PLR++ L + +R P + LV+RF L R+LWN FKS +SPHE LQ
Sbjct: 219 LLHVPPLRNFLLNPNTPELQEERRPTE----LVKRFATLARRLWNSHLFKSQISPHEFLQ 274
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
V S +F+ TEQ DP++ L W +NTLHR L G+KK++SSI+Y TF G ++++T+++
Sbjct: 275 EVSKRSNGKFKTTEQGDPVELLGWLVNTLHRDLGGSKKRNSSIIYSTFQGKVQIETQQV- 333
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+ +E R + + + SPFL+L DLP PLF D + IIPQV L IL K
Sbjct: 334 -IVHKEYARPVFDIGRDIQ--TISSPFLFLALDLPITPLFTDMNEKKIIPQVPLSQILAK 390
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
F+ ++ +E+ LKR +TSLPPYLIL++KRFTKN F E+NPTIVNFP++ V+
Sbjct: 391 FDGKTTQEFGPS----LKRHHLTSLPPYLILHIKRFTKNNFVEERNPTIVNFPLRGVEMS 446
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD----------------------G 278
D + P K M+ T YDL++N+ D G
Sbjct: 447 DYVDP----KPSDPMH---------TQYDLLSNVFLDTTTASTSSSGTGPGISKRNPAPG 493
Query: 279 EPSNGTYRVHLY--HKGIG------------KWYEIQDLHVTDILPQMITLTEAYIQIYE 324
E + ++++H+ H G+ KW+E+QDL+VT++ +M+ L E +Q++E
Sbjct: 494 EENQMSWKIHIRAGHAGVNANGSAEGENKGEKWFELQDLNVTEVRKEMVFLGETVVQVWE 553
Query: 325 LRTTPSPTAMSEG 337
+ +SEG
Sbjct: 554 RKD------LSEG 560
>gi|336269902|ref|XP_003349711.1| hypothetical protein SMAC_07064 [Sordaria macrospora k-hell]
gi|380088850|emb|CCC13285.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 541
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 134/321 (41%), Positives = 184/321 (57%), Gaps = 37/321 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV+PLR++FL E +++ LV+R L RK+WNPR FKSHVSPHE+LQ
Sbjct: 238 ALSHVSPLRNFFLLE-DFSNAPE--------LVKRTSILFRKIWNPRAFKSHVSPHELLQ 288
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T+QSDP++FLSWFLN LH L G+K K SS++ F G +KV+++ I
Sbjct: 289 EISLRSNKKFTLTQQSDPVEFLSWFLNHLHLGLGGSKTKPHSSVIQHIFQGKLKVESQAI 348
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
++V RL E + S FL LT DLPP PLF+DE NIIPQV L TIL
Sbjct: 349 --TARADQVHDRLRFEEATDVQSSVSRFLLLTLDLPPAPLFQDEQERNIIPQVPLTTILA 406
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K+N + +E + KR+ + LPP+L+ ++KRF+KN F E+NPTIV F +N+D
Sbjct: 407 KYNGVTAQELNAQR----KRYRLQHPLPPFLVFHIKRFSKNKFVSERNPTIVTFDARNLD 462
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH-------DGEPSNG----TYRV 287
+ P+ ++++ E YDLVAN+VH D S G T++V
Sbjct: 463 VSPYVEPDPNSQHQHG---------EPIWYDLVANVVHEAVRNKEDVADSVGEERKTWKV 513
Query: 288 HLYHKGIGKWYEIQDLHVTDI 308
L K +W QDL V +
Sbjct: 514 QLRDKATDEWVVAQDLFVDKV 534
>gi|219122453|ref|XP_002181559.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406835|gb|EEC46773.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 474
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 127/329 (38%), Positives = 187/329 (56%), Gaps = 22/329 (6%)
Query: 1 ALCHVTPLRDYFL-REINYARVKRPPGDSSFLLV----QRFGELMRKLWNPRNFKSHVSP 55
AL HV PLRD+FL + N + + +S L Q FGEL+RK+W+ + FKS V P
Sbjct: 157 ALAHVQPLRDFFLSKSHNESLLSSKKSQASNRLAHHVAQCFGELVRKIWSSKRFKSTVDP 216
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVK 115
H ++QA+ S+K+F+ Q++ + ++W L+ LH G +K SSIV+KTF G +K
Sbjct: 217 HMLIQAIATASKKRFKVGVQAEAGELVAWLLHRLHVGTGGGRKAGSSIVHKTFQGKEGLK 276
Query: 116 TRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLY 175
Q +L+ E +ET T++ FL LT D+P PLF+DE +IPQ L
Sbjct: 277 MND-----------QEVLV--EIEETATDTHFLQLTLDIPEKPLFRDEDGGLVIPQEPLV 323
Query: 176 TILTKFNNES-EKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV 234
++L KF+ + KR+++ LP YLIL++ RF N + EKNP+IV FPV
Sbjct: 324 SVLKKFDGVTFSDALNRSGVAQRKRYQLLKLPDYLILHLARFKDNRYTKEKNPSIVMFPV 383
Query: 235 KNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGI 294
KN+D G+ + E K + ++ YDLVANI H+ +G Y+ H+ H+
Sbjct: 384 KNLDLGEYVHKE---KQSLPTEEQIRGMTVRQKYDLVANITHESPADDGHYKCHVQHQAT 440
Query: 295 GKWYEIQDLHVTDILPQMITLTEAYIQIY 323
+WYEIQDLHV +I+PQ I L+E Y+ I+
Sbjct: 441 RQWYEIQDLHVQEIMPQQIGLSECYLLIF 469
>gi|328771476|gb|EGF81516.1| hypothetical protein BATDEDRAFT_10470 [Batrachochytrium
dendrobatidis JAM81]
Length = 506
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 144/327 (44%), Positives = 188/327 (57%), Gaps = 37/327 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+ HV LRDYFL + DS LV+RFG L+RK+WN R FK VSPHE++Q
Sbjct: 208 SFAHVELLRDYFLLD---------KSDSQSELVKRFGLLLRKMWNSRAFKGQVSPHELIQ 258
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+ S K+F+ EQ+DP FLSW +N LH L K SSI+ + F G + V++R P
Sbjct: 259 EISNVSDKRFKLGEQADPAQFLSWLINKLHLGLCSKKSNKSSIMQQAFQGELYVESR--P 316
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+ +E + T + PF +LT DLPPPPLF DE +NIIPQ+ L T+L K
Sbjct: 317 FITDQETGESN--INNLGDATVSTLPFWFLTLDLPPPPLFSDEAEKNIIPQIPLTTLLEK 374
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFV-EKNPTIVNFPVKNVDF 239
FN S E + + ++I LP YLI KRF+KN + EKNPTIVNFP+KN+D
Sbjct: 375 FNGTSVCETGSA----VMTYKIQKLPRYLIFSFKRFSKNNWNAFEKNPTIVNFPIKNLD- 429
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP--SNGTYRVHLYHKGIGKW 297
M D V+ ES YDL+ANI H+G+P NG Y+VHL K +W
Sbjct: 430 ---------------MADYVQGG-ESARYDLIANICHEGKPGTGNGAYKVHLLSKAKSQW 473
Query: 298 YEIQDLHVTDILPQMITLTEAYIQIYE 324
+IQDL V +I+ QMI L+E YIQI+E
Sbjct: 474 LQIQDLFVEEIMAQMIILSETYIQIWE 500
>gi|340502777|gb|EGR29429.1| ubiquitin carboxyl-terminal, putative [Ichthyophthirius
multifiliis]
Length = 545
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 132/329 (40%), Positives = 194/329 (58%), Gaps = 29/329 (8%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
ALC V LRD + N V + D LL +RF L++K+WNP+NFK VSPHE+LQ
Sbjct: 231 ALCRVPLLRDQIILYNN--TVNQDVFDLKTLLSKRFSNLIKKIWNPKNFKGQVSPHELLQ 288
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
A+VL S K+F QSDPI L W LN++ L T D ++ F G ++V T K
Sbjct: 289 AIVLKSNKKFNINLQSDPIKLLCWLLNSIQIELKDTHFSD--LIENCFKGEVEVHTYK-- 344
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P+ Q + + E S F+YLT ++PPPPL KD+ L+ IP++ ++ +L K
Sbjct: 345 PL-------QNQIGYSSVPKIEAMS-FIYLTLNIPPPPLHKDDSLKINIPEMPIFNLLKK 396
Query: 181 FNNESEKEYKTYKE-NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
F+ + TY F K + I LP YLIL+++RFT N +++EKNPTIV FP+ N+D
Sbjct: 397 FDGVT-----TYDNPKFRKTYRIKKLPKYLILHMERFTFNKYYLEKNPTIVRFPLNNLDL 451
Query: 240 GDILTPEVKAKYESTMYDLVKAK----YESTMYDLVANIVHDGEPSNGTYRVHLYHKGIG 295
+ + + +Y L + K T Y+L+A+I H+G NG Y++H+ +K
Sbjct: 452 KGCIYKNI-----NKVYILFQQKDVDEGSCTKYNLLASICHEGPTKNGIYKIHVRNKANN 506
Query: 296 KWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+W+EIQDL++T ++PQ I+++EAYIQIYE
Sbjct: 507 QWFEIQDLYITQVIPQRISVSEAYIQIYE 535
>gi|347841544|emb|CCD56116.1| similar to U4/U6.U5 tri-snRNP-associated protein [Botryotinia
fuckeliana]
Length = 553
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/338 (41%), Positives = 195/338 (57%), Gaps = 39/338 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR++FL E + R + L++R L RK+WNPR FKSHVSPHE+LQ
Sbjct: 231 ALSHVPPLRNFFLLEDFHNRPE---------LIKRVSILFRKIWNPRAFKSHVSPHELLQ 281
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDP+DFLSWFLN LH AL G+K K SSI+ K F G +KV+++ I
Sbjct: 282 EISLKSNKKFNLTTQSDPVDFLSWFLNNLHLALGGSKTKPGSSIIQKIFQGKLKVESQAI 341
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+ RL + +T+ S F+ LT DLPP PLF+DE+ NIIPQ+ L +IL
Sbjct: 342 TA---KADAGDRLRFEDADVKTDV-SRFMLLTLDLPPAPLFQDELERNIIPQIPLTSILA 397
Query: 180 KFNNESEKEYKTYKENFLKRFE-ITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K++ +E+ N KR+ + LPP+L+ ++KRF+ N F E+NPTIV F +N+D
Sbjct: 398 KYDGLKAQEHL----NMRKRYRLLHPLPPFLLFHIKRFSHNKFVDERNPTIVTFDARNLD 453
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVH 288
+ P++K E YDLVANIVH +GE +++V
Sbjct: 454 MSPYIEPDMKHARPG----------EPIWYDLVANIVHEAVRGREDSVEGESEKRSWKVQ 503
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
L K G+W +QDL V + + L E+Y+Q++E R
Sbjct: 504 LRDKATGEWKVVQDLFVEGGQREFLHLGESYLQVWEKR 541
>gi|58264574|ref|XP_569443.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134109995|ref|XP_776383.1| hypothetical protein CNBC5990 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259057|gb|EAL21736.1| hypothetical protein CNBC5990 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57225675|gb|AAW42136.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 562
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/360 (37%), Positives = 199/360 (55%), Gaps = 62/360 (17%)
Query: 2 LCHVTPLRDYFLR-EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L HV PLR++ L + + R P + LV+RF L R+LWN FKS +SPHE LQ
Sbjct: 219 LLHVPPLRNFLLNPDTPELQDDRRPTE----LVKRFATLARRLWNSHLFKSQISPHEFLQ 274
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
V S +F+ TEQ DP++ L W +NTLHR L G+KK++SSI+Y TF G ++++T+++
Sbjct: 275 EVSKRSNGKFKTTEQGDPVELLGWLVNTLHRDLGGSKKRNSSIIYSTFQGKVQIETQQV- 333
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+ +E R + + + SPFL+L DLP PLF D + IIPQV L IL K
Sbjct: 334 -IVHKEYARPVFDIGRDIQ--TISSPFLFLALDLPITPLFTDMNEKKIIPQVPLSQILAK 390
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
F+ ++ +E+ LKR +TSLPPYLIL++KRFTKN F E+NPTIVNFP++ V+
Sbjct: 391 FDGKTTQEFGPS----LKRHHLTSLPPYLILHIKRFTKNNFVEERNPTIVNFPLRGVEMS 446
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD----------------------G 278
D + P K M+ T YDL++N+ D G
Sbjct: 447 DYVDP----KPSDPMH---------TQYDLLSNVFLDTTTASTSSSGTGPGISKRNPAPG 493
Query: 279 EPSNGTYRVHLYHKGIG--------------KWYEIQDLHVTDILPQMITLTEAYIQIYE 324
E + ++++H+ G KW+E+QDL+VT++ +M+ L E +Q++E
Sbjct: 494 EENQMSWKIHVRAGRAGGNANGSGEAENKGEKWFELQDLNVTEVRKEMVFLGETVVQVWE 553
>gi|402085602|gb|EJT80500.1| U4/U6.U5 tri-snRNP-associated protein 2 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 599
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 133/346 (38%), Positives = 188/346 (54%), Gaps = 39/346 (11%)
Query: 1 ALCHVTPLRDYFLRE-------INYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHV 53
AL HV PLR++ L E + LV+R LMRK+WNPR FK+HV
Sbjct: 259 ALAHVPPLRNFLLLEDLGGGGGGGGGGGNNNNSSQTAELVRRCSTLMRKIWNPRAFKAHV 318
Query: 54 SPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSM 112
SPHE+LQ V L S K+F T QSDP+DFLSWFLN LH L G++ + SS+V + F G +
Sbjct: 319 SPHELLQEVSLLSNKRFTLTAQSDPVDFLSWFLNNLHLGLGGSRTRPGSSMVQRVFQGRV 378
Query: 113 KVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK---DEVLENII 169
KV+++ I + RL + + PFL LT DLPP PLF+ D+ +II
Sbjct: 379 KVESQAI---TAKADAFDRLRFEDAAEVKVDVGPFLLLTLDLPPAPLFQGGGDDEERSII 435
Query: 170 PQVNLYTILTKFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPT 228
PQV L +IL K++ S +E+ ++ +R+ + LPPYLIL+VKRF++N F E+NPT
Sbjct: 436 PQVPLTSILAKYDGVSAQEHLNHR----RRYRLMHPLPPYLILHVKRFSRNKFVSERNPT 491
Query: 229 IVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DG 278
IV F + +D + P+ + E +YDLVAN+VH D
Sbjct: 492 IVTFDPRGLDVAPYVEPDPA----------LHPPGEPVLYDLVANVVHEAVKAKDDVADS 541
Query: 279 EPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
T++V L + +W QDL V I +++ L E Y+Q++E
Sbjct: 542 SEERKTWKVQLRDRARDEWVVCQDLFVDKIRDELLYLGETYLQVWE 587
>gi|321253150|ref|XP_003192646.1| ubiquitin C-terminal hydrolase [Cryptococcus gattii WM276]
gi|317459115|gb|ADV20859.1| Ubiquitin C-terminal hydrolase, putative [Cryptococcus gattii
WM276]
Length = 573
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 137/373 (36%), Positives = 204/373 (54%), Gaps = 68/373 (18%)
Query: 2 LCHVTPLRDYFLR-EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L HV PLR++ L + +R P + LV+RF L R+LWN FKS +SPHE LQ
Sbjct: 229 LLHVPPLRNFLLNPNTPELQEERRPTE----LVRRFATLARRLWNSHLFKSQISPHEFLQ 284
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
V S +F+ TEQ DP++ L W +NTLHR L G+KK++SSI+Y TF G ++++T+++
Sbjct: 285 EVSKRSNGKFKTTEQGDPVELLGWLVNTLHRDLGGSKKRNSSIIYSTFQGKVQIETQQV- 343
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+ +E R + + + SPFL+L DLP PLF D + IIPQV L IL K
Sbjct: 344 -IVHKEYARPVFDIGRDIQ--TVSSPFLFLALDLPITPLFTDMNEKKIIPQVPLSQILAK 400
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
F+ ++ +E+ LKR +TSLPPYLIL++KRFTKN F E+NPTIVNFP++ V+
Sbjct: 401 FDGKTTQEFGPT----LKRHHLTSLPPYLILHIKRFTKNNFVEERNPTIVNFPLRGVEMS 456
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD----------------------G 278
+ + P K M+ T YDL++N+ D G
Sbjct: 457 EYVDP----KPSDPMH---------TQYDLLSNVFLDTTTASTSSSGTGPGKSKRNPAPG 503
Query: 279 EPSNGTYRVHLYHKGIG--------------KWYEIQDLHVTDILPQMITLTEAYIQIYE 324
E + ++++H+ G KW+E+QDL+VT++ +M+ L E +Q++E
Sbjct: 504 EENQMSWKIHVRAGHAGGNANSNGETENRGEKWFELQDLNVTEVRKEMVFLGETVVQVWE 563
Query: 325 LRTTPSPTAMSEG 337
+ +SEG
Sbjct: 564 RKD------LSEG 570
>gi|452819224|gb|EME26289.1| ubiquitin thiolesterase/ zinc ion binding protein [Galdieria
sulphuraria]
Length = 451
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 191/325 (58%), Gaps = 32/325 (9%)
Query: 1 ALCHVTPLRDYFLR-EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
AL + PLRD+FL +++ P L+ FGE MRK WNPR F+S +SPHE++
Sbjct: 156 ALVRIKPLRDFFLLYQMDKQDTIEHP------LIASFGEFMRKFWNPRPFRSQISPHELV 209
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKI 119
Q +V S+K+F +Q +P++FL+WFL++L L +K ++ TF G M+++T
Sbjct: 210 QEIVKRSKKRFPILQQGNPVEFLAWFLHSLQDDLMRAGQK--PLMKNTFEGQMEIET--- 264
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+ EK Q+L+ K+ S FL+L+ +LPP PLFKD + N+IPQV+L ++L+
Sbjct: 265 --FQANEKSSQQLI-----KKDHKLSQFLFLSLELPPMPLFKDSLERNMIPQVSLASLLS 317
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
+F ++ + + R+ + LP LIL +KRF K+ F EKN +IV+FP++++D
Sbjct: 318 RFVQ--QELHHDVQTGHSYRYRLRRLPYCLILVMKRFVKSNFVWEKNISIVHFPIRDLDM 375
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYE 299
+ L+ + +YDL A ++HDG+P GTYR ++ HK W+E
Sbjct: 376 TEYLSMSCPG-----------IESNGVVYDLTAVVIHDGKPKGGTYRCYIRHKASDSWFE 424
Query: 300 IQDLHVTDILPQMITLTEAYIQIYE 324
IQDL V + +PQ+++L+EAYI YE
Sbjct: 425 IQDLQVKEAIPQLVSLSEAYILFYE 449
>gi|358389617|gb|EHK27209.1| hypothetical protein TRIVIDRAFT_62978 [Trichoderma virens Gv29-8]
Length = 551
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 136/345 (39%), Positives = 194/345 (56%), Gaps = 38/345 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV+PLR+Y L E ++++ LV+R L RK+WNPR FKSHVSPHE+LQ
Sbjct: 224 ALSHVSPLRNYLLLE-DFSKKSE--------LVKRCSILFRKIWNPRAFKSHVSPHELLQ 274
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDP++FLSWFLN LH L G+K K SS++ +TF G +KV+++ I
Sbjct: 275 EIALLSNKRFTLTNQSDPVEFLSWFLNNLHLGLGGSKTKPGSSMIQRTFQGKLKVESQAI 334
Query: 120 PPVELEEKVRQRLLLTEEYKETETE-SPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
+ R R EE E + + FL+LT DLP PLF+DE+ +NIIPQV L TIL
Sbjct: 335 -TARADAGDRLRF---EEAAEVKVDIVRFLFLTLDLPSAPLFQDELEKNIIPQVPLSTIL 390
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
+K++ + +E+ ++ + + L+L+VKRF++N F E+NPTIV F +N+D
Sbjct: 391 SKYDGKRAQEHHAQRKRYRLLHPLPPF---LLLHVKRFSQNKFVSERNPTIVTFDARNLD 447
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVH 288
+ P E YDLVAN+VH D T++V
Sbjct: 448 VSPYVEPNPNEWPVG----------EPIWYDLVANVVHEAVRKRDDVADSGEEKKTWKVQ 497
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTA 333
+ K G+W QDL V + +++ L E Y+QI+E R P+ A
Sbjct: 498 IKDKATGEWVVCQDLFVDKVQSELLYLGETYLQIWERRRVPTKAA 542
>gi|169601432|ref|XP_001794138.1| hypothetical protein SNOG_03581 [Phaeosphaeria nodorum SN15]
gi|111067666|gb|EAT88786.1| hypothetical protein SNOG_03581 [Phaeosphaeria nodorum SN15]
Length = 560
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 143/348 (41%), Positives = 196/348 (56%), Gaps = 37/348 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+YF+ E +R + + QRF L+RK+WNPR FK+HVSPHE+LQ
Sbjct: 237 ALSHVVPLRNYFMLEDLSSRPQ---------IAQRFSTLVRKIWNPRAFKTHVSPHELLQ 287
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
V L S K+F T+Q+DP+DF+SWFLN LH A+ G+K K SSIV K F GS+K+++++I
Sbjct: 288 EVALRSSKRFNLTDQADPVDFISWFLNHLHLAVGGSKTKPGSSIVQKVFQGSLKIESQEI 347
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
RL + +TE S FL LT DLP PLF+D + +NIIPQV L TIL
Sbjct: 348 ---TARADAGDRLRFEDAAVKTEI-SKFLVLTLDLPAAPLFQDALEKNIIPQVPLTTILG 403
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
K++ +E +N ++ + LPPYL+ +KRF+KN F E+NPTIV FP ++D
Sbjct: 404 KYDGMRPQE---KMKNRVRYRLLHPLPPYLLFNIKRFSKNKFVSERNPTIVTFPTVSLDM 460
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVHL 289
+ P K +Y E YDLVANI H +GE + +RV L
Sbjct: 461 SPYVEPNPK-EYPPG---------EPIWYDLVANITHEAVKKKDDSVEGEQESKVWRVQL 510
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTAMSEG 337
+ +WY IQDL V + + EAY+ ++E R A +G
Sbjct: 511 KDRARDEWYGIQDLFVEKERGETLFTKEAYVMVWERRRGQQGVAKWKG 558
>gi|84994334|ref|XP_951889.1| ubiquitin carboxyl-terminal hydrolase [Theileria annulata strain
Ankara]
gi|65302050|emb|CAI74157.1| ubiquitin carboxyl-terminal hydrolase, putative [Theileria
annulata]
Length = 578
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/332 (38%), Positives = 193/332 (58%), Gaps = 47/332 (14%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
+C V PLR+ FL + RV+ P ++ +L+RK++N +NFK VSPHE +Q+
Sbjct: 282 ICVVEPLRNLFLV-FDVNRVQPPDP-----VIITLSQLIRKIFNVKNFKGIVSPHEFVQS 335
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
V + + ++ QSDP+ LSW L +H+ L+ K+S +V KTF G + +KT K
Sbjct: 336 VGIVTNGLYKIGVQSDPVSLLSWLLARIHQKLHNRNTKES-VVTKTFGGELLIKTLK--- 391
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKF 181
K R ETE + PF L+ +P P+FKD + N IPQ ++ +L+K+
Sbjct: 392 -----KTRW---------ETERQ-PFRMLSLTVPEAPIFKDSMDSNAIPQAQIFELLSKY 436
Query: 182 NNESEKEYKTYKENF-LKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
+ +E T N + ++++ LP YLIL +KRFTKN FF+EKNPTIV+FP+KN+D
Sbjct: 437 DGVTE----TVNANGDVCTYKLSKLPKYLILIIKRFTKNNFFLEKNPTIVSFPMKNLDLK 492
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
D +T E+K T YDL NI H+G+P+ G ++VH+YH G W+++
Sbjct: 493 DYVTEEIKDSV--------------TRYDLYCNICHEGKPTGGIFKVHVYHAPSGNWFQM 538
Query: 301 QDLHVTDILPQMITLTEAYIQIY---ELRTTP 329
+DL VT ILPQ + LTE+Y+Q+Y +L T P
Sbjct: 539 EDLLVTSILPQQVALTESYVQVYKRQDLTTVP 570
>gi|330914555|ref|XP_003296684.1| hypothetical protein PTT_06849 [Pyrenophora teres f. teres 0-1]
gi|311331025|gb|EFQ95191.1| hypothetical protein PTT_06849 [Pyrenophora teres f. teres 0-1]
Length = 545
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/337 (40%), Positives = 192/337 (56%), Gaps = 37/337 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+YF+ E + + L QRF L+RK+WNPR FK+HVSPHE+LQ
Sbjct: 226 ALSHVVPLRNYFMLEDLSGKPQ---------LAQRFSTLVRKIWNPRAFKTHVSPHELLQ 276
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T+QSDP+DFLSWFLN LH A+ G++ K SSI+ K F G +K++ ++I
Sbjct: 277 EIALRSSKRFTLTDQSDPVDFLSWFLNNLHLAVGGSRTKPSSSIIQKVFQGRLKIEQQEI 336
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
RL + +TE + FL LT DLP PLF+D + +NIIPQV L IL
Sbjct: 337 ---TARADAGDRLRFEDAAVQTEI-TRFLVLTLDLPAAPLFQDALEKNIIPQVPLVNILA 392
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
K+N + +E +N ++ + LPPYL+ +KRF+KN F E+NPTIV FPV ++D
Sbjct: 393 KYNGVTPQE---KSKNRVRYRLLHPLPPYLLFNIKRFSKNKFVSERNPTIVTFPVHSLDM 449
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVHL 289
+ P K +Y E YDLVANI H +GE + +RV +
Sbjct: 450 APYVEPNPK-EYPPG---------EPIWYDLVANITHEAVKKKDDSVEGEQESKVWRVQV 499
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
+ +WY IQDL+V + + EAY+ ++E R
Sbjct: 500 KDRAREEWYGIQDLYVEKERAETLFTKEAYLMVWERR 536
>gi|451848874|gb|EMD62179.1| hypothetical protein COCSADRAFT_147685 [Cochliobolus sativus
ND90Pr]
Length = 548
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 139/335 (41%), Positives = 192/335 (57%), Gaps = 37/335 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+YF+ E R + L QRF L+RK+WNPR FK+HVSPHE+LQ
Sbjct: 227 ALSHVVPLRNYFMLEDLSNRPQ---------LAQRFSTLVRKIWNPRAFKTHVSPHELLQ 277
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T+QSDP+DFLSWFLN LH A+ G++ K SSI+ K F G++K++ ++I
Sbjct: 278 EIALRSSKRFTLTDQSDPVDFLSWFLNNLHLAVGGSRTKPHSSIIQKVFQGTLKIEQQEI 337
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
RL + +T T S FL LT DLP PLF+D + +NIIPQV L IL+
Sbjct: 338 ---TARADAGDRLRFEDAAVQT-TTSHFLVLTLDLPAAPLFQDALEKNIIPQVPLVNILS 393
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
K+N + +E +N ++ + LPPYL+ +KRF+KN F E+NPTIV FPV ++D
Sbjct: 394 KYNGVTPQE---KSKNRVRYRLLHPLPPYLLFNIKRFSKNKFVAERNPTIVTFPVHSLDM 450
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVHL 289
+ P A+Y E YDLVANI H +GE + +RV +
Sbjct: 451 SPYVEPN-PAEYPPG---------EPIWYDLVANITHEAVKKKDDSVEGELESKIWRVQV 500
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+ +WY IQDL V + + EAY+ ++E
Sbjct: 501 KDRAREEWYGIQDLFVEKERAETLFTKEAYLMVWE 535
>gi|328859895|gb|EGG09003.1| hypothetical protein MELLADRAFT_84272 [Melampsora larici-populina
98AG31]
Length = 698
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 138/380 (36%), Positives = 192/380 (50%), Gaps = 74/380 (19%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HVTPLRDY + R P + LV+RFG LMRKLWNP+ FKS VSPHE Q
Sbjct: 325 LSHVTPLRDYL--------ICRKPTSNDTELVKRFGTLMRKLWNPKAFKSQVSPHEFGQE 376
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNG-------------------------- 95
V S ++F+ TEQ+DP++FL W LNTLH L G
Sbjct: 377 VSKRSNRKFKLTEQADPLEFLGWLLNTLHLDLGGHQKKPMKKKHMKLKNEGNPQESDQMI 436
Query: 96 -----TKKKDSSIVYKTFLGSMKVKTRKI--PPVELEEKVRQRLLLTEEYKETETESPFL 148
K + SSI+ F G ++++ I P E+ ++ L E + +T PFL
Sbjct: 437 KKVEEEKDEPSSIIDAAFRGEVRIEEHDILARPDTGEKGLKPIFDLGAEVRTIQT--PFL 494
Query: 149 YLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPY 208
+LT DLPPPP+F+D + +NIIPQ+ L +L K++ + E LKRF+I LPP+
Sbjct: 495 FLTIDLPPPPVFQDTIEKNIIPQIGLNEVLMKYDGKKTIEINGK----LKRFKILGLPPF 550
Query: 209 LILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMY 268
LIL+ KRFT N F EKNPTIVNF K +D V E +Y
Sbjct: 551 LILHFKRFTSNNFIEEKNPTIVNFHTKGIDLS-----PYYEPKPKEKEKEVDEPIER-LY 604
Query: 269 DLVANIVHDGEPS----NGTYRVHLYHKGIG-----------------KWYEIQDLHVTD 307
DL+AN+ + + ++V ++ + + KW++IQDL V +
Sbjct: 605 DLLANVTYSSTAGTAKEDSQWKVQVHTRSVNEKQEEELKANSLKPNEEKWFQIQDLIVEE 664
Query: 308 ILPQMITLTEAYIQIYELRT 327
I QM+ L E+YIQ++E R+
Sbjct: 665 INRQMVFLGESYIQVWERRS 684
>gi|156053570|ref|XP_001592711.1| hypothetical protein SS1G_05632 [Sclerotinia sclerotiorum 1980]
gi|154703413|gb|EDO03152.1| hypothetical protein SS1G_05632 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 541
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 138/338 (40%), Positives = 193/338 (57%), Gaps = 39/338 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR++FL E + P L++R L RK+WNPR FKSHVSPHE+LQ
Sbjct: 219 ALSHVPPLRNFFLLE----DFRNKPE-----LIKRVSILFRKIWNPRAFKSHVSPHELLQ 269
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDP+DFLSWFLN LH AL G+K K SS++ K F G +KV+++ I
Sbjct: 270 EISLKSNKKFNLTTQSDPVDFLSWFLNNLHLALGGSKTKPGSSVIQKIFQGKLKVESQAI 329
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+ RL + +T+ S F+ LT DLP PLF+DE+ NIIPQ+ L +IL
Sbjct: 330 TA---KADAGDRLRFEDADVKTDV-SRFMLLTLDLPAAPLFQDELERNIIPQIPLTSILA 385
Query: 180 KFNNESEKEYKTYKENFLKRFE-ITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K++ +E+ N KR+ + LPP+L+ ++KRF+ N F E+NPTIV F +N+D
Sbjct: 386 KYDGLKAQEHL----NMRKRYRLLHPLPPFLLFHIKRFSHNKFVDERNPTIVTFDARNLD 441
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVH 288
+ P++K E YDLVANIVH +GE +++V
Sbjct: 442 MSPYIEPDMKHARPG----------EPIWYDLVANIVHEAVRGREDSVEGESEKRSWKVQ 491
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
L K G+W +QDL V + + L E+Y+Q++E R
Sbjct: 492 LRDKATGEWKVVQDLFVEGGQREFLHLGESYLQVWEKR 529
>gi|71031494|ref|XP_765389.1| ubiquitin carboxyl-terminal hydrolase [Theileria parva strain
Muguga]
gi|68352345|gb|EAN33106.1| ubiquitin carboxyl-terminal hydrolase, putative [Theileria parva]
Length = 537
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 190/339 (56%), Gaps = 52/339 (15%)
Query: 2 LCHVTPLRDYFLR-EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+C V PLR+ FL ++N + P ++ +L+RK++N +NFK VSPHE +Q
Sbjct: 231 ICVVVPLRNLFLVFDVNKVQPPDP-------VITTLSQLIRKIFNVKNFKGIVSPHEFVQ 283
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDS---------SIVYKTFLGS 111
+V + + ++ QSDP+ LSW L +H+ L+ K S SIV KTF G
Sbjct: 284 SVGIVTNGLYKIGVQSDPVSLLSWLLARIHQKLHNKNTKGSFKTSFHIVESIVTKTFGGE 343
Query: 112 MKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQ 171
+ +KT L + ETE + PF L+ +P P+FKD + N IPQ
Sbjct: 344 LLIKT-----------------LKKNRWETERQ-PFRMLSLTVPEAPIFKDSMDTNAIPQ 385
Query: 172 VNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVN 231
++ +L+K++ +E + ++++ LP YLIL +KRFTKN FF+EKNPTIV+
Sbjct: 386 AQIFELLSKYDGVTET---VNSSGDVCTYKLSKLPTYLILIIKRFTKNNFFLEKNPTIVS 442
Query: 232 FPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYH 291
FP+KN+D D +T E+K T YDL N+ H+G+P+ G ++VH+YH
Sbjct: 443 FPMKNLDLKDYVTEEIKDSV--------------TRYDLYCNVCHEGKPTGGIFKVHVYH 488
Query: 292 KGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G W++++DL VT ILPQ + LTE+Y+Q+Y+ + + S
Sbjct: 489 PPSGNWFQMEDLLVTSILPQQVALTESYVQVYKRQDSGS 527
>gi|189193545|ref|XP_001933111.1| U4/U6.U5 tri-snRNP-associated protein 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187978675|gb|EDU45301.1| U4/U6.U5 tri-snRNP-associated protein 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 546
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/335 (40%), Positives = 190/335 (56%), Gaps = 37/335 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+YF+ E + + L QRF L+RK+WNPR FK+HVSPHE+LQ
Sbjct: 225 ALSHVVPLRNYFMLEDLSGKPQ---------LAQRFSTLVRKIWNPRAFKTHVSPHELLQ 275
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDP+DFLSWFLN LH A+ G++ K SSI+ K F G +K++ ++I
Sbjct: 276 EISLRSSKRFTLTNQSDPVDFLSWFLNNLHLAVGGSRTKPSSSIIQKVFQGRLKIEQQEI 335
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
RL + +TE + FL LT DLP PLF+D + +NIIPQV L IL
Sbjct: 336 ---TARADAGDRLRFEDAAVQTEI-TRFLVLTLDLPAAPLFQDALEKNIIPQVPLVNILA 391
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
K+N + +E +N ++ + LPPYL+ +KRF+KN F E+NPTIV FPV ++D
Sbjct: 392 KYNGVTPQE---KSKNRVRYRLLHPLPPYLLFNIKRFSKNKFVSERNPTIVTFPVHSLDM 448
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVHL 289
+ P K +Y E YDLVANI H +GE + +RV +
Sbjct: 449 APYVEPNPK-EYPPG---------EPIWYDLVANITHEAVKKKDDSVEGEQESKVWRVQV 498
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+ +WY IQDL+V + + EAY+ ++E
Sbjct: 499 KDRAREEWYGIQDLYVEKERAETLFTKEAYLMVWE 533
>gi|301117246|ref|XP_002906351.1| U4/U6.U5 tri-snRNP-associated protein, putative [Phytophthora
infestans T30-4]
gi|262107700|gb|EEY65752.1| U4/U6.U5 tri-snRNP-associated protein, putative [Phytophthora
infestans T30-4]
Length = 493
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 187/369 (50%), Gaps = 84/369 (22%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRD+FL +VK LV RFGEL+RK+W+P NFK+ +SPHE++Q
Sbjct: 167 ALAHVPPLRDFFLAN-KMGKVKSK-------LVLRFGELLRKMWSPHNFKNTISPHELVQ 218
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+ L GT K SSI++K F G ++V T
Sbjct: 219 EI----------------------------SGLGGTHKPGSSIIHKCFQGFVEVTT---- 246
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+ E KV E + T SPFL + DLP PLFKD NIIPQ+ L+T+L K
Sbjct: 247 --DDETKVASSDPAERESAVSTTVSPFLMMALDLPSTPLFKDSQGGNIIPQIPLFTVLEK 304
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
+N K + I SLP +LI +VKRFT+N FF+EKNPTIVNFPVKN++
Sbjct: 305 YNGSHITHVLQGSHRLKKTYRIDSLPAFLIFHVKRFTRNNFFIEKNPTIVNFPVKNLELR 364
Query: 241 DILT--------PEVKAKYESTMYDLVKAKYES---------------------TMYDLV 271
D L E++ K S + L++ +S T ++LV
Sbjct: 365 DYLKLDQSLPSEEELREKSISELRSLLRKHNQSTEDCVEKSDLVEKILRVTQPCTKFNLV 424
Query: 272 ANIVHD-----GEPS--------NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEA 318
ANI HD G+ + G+YRVH+ ++ +WYEIQDLHV + +PQ+I ++E+
Sbjct: 425 ANICHDSPVTTGQEAALQTNPLTEGSYRVHVQNRATEQWYEIQDLHVQETMPQLIGVSES 484
Query: 319 YIQIYELRT 327
Y+ IYE +
Sbjct: 485 YLMIYERKA 493
>gi|348688293|gb|EGZ28107.1| hypothetical protein PHYSODRAFT_309027 [Phytophthora sojae]
Length = 489
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/369 (36%), Positives = 187/369 (50%), Gaps = 82/369 (22%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRD+FL N A K+ LV RFGEL+RK+W+P NFK+ +SPHE++Q
Sbjct: 161 ALAHVPPLRDFFL--ANAATTKKIKSK----LVLRFGELLRKMWSPHNFKNTISPHELVQ 214
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+ L G+ K SSI++K F G ++V T
Sbjct: 215 EI----------------------------SGLGGSHKPGSSIIHKCFQGFVEVTT---- 242
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+ E K E + T SPFL + DLP PLFKD NIIPQ+ L+T+L K
Sbjct: 243 --DDETKAASADPAERESAVSTTVSPFLMMALDLPSTPLFKDSQGGNIIPQIPLFTVLEK 300
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
+N K + I SLP YLI +VKRFT+N FF+EKNPTIV FPVKN++
Sbjct: 301 YNGSHVTHVLQGSHRLKKTYRIDSLPAYLIFHVKRFTRNNFFIEKNPTIVTFPVKNLELR 360
Query: 241 DILT--------PEVKAKYESTMYDLVKAKYE---------------------STMYDLV 271
D L E++ K S + D+++ + ST Y+L+
Sbjct: 361 DYLKLDQSLPSEEELRNKSISELRDILRNHKQSTEDCVEKADLVEKILRVTLPSTKYNLI 420
Query: 272 ANIVHD-----GEPS--------NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEA 318
ANI HD G+ + G+YRVH+ ++ +WYEIQDLHV + +PQ+I ++E+
Sbjct: 421 ANICHDSPVTTGQEAALQTNPLTEGSYRVHVQNRATEQWYEIQDLHVQETMPQLIGVSES 480
Query: 319 YIQIYELRT 327
Y+ IYE +
Sbjct: 481 YLMIYERKA 489
>gi|452980130|gb|EME79891.1| hypothetical protein MYCFIDRAFT_37991 [Pseudocercospora fijiensis
CIRAD86]
Length = 545
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 130/338 (38%), Positives = 196/338 (57%), Gaps = 41/338 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR++ + E + + L++RF ++RK+WNP+ FKSHVSPHE++Q
Sbjct: 226 ALSHVVPLRNFLMLEDLSLKSE---------LIKRFSIMVRKIWNPKAFKSHVSPHELIQ 276
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
V L S K+F T+Q+DPIDFLSWFLN LH AL G+K K SS++ K F GS++V++++I
Sbjct: 277 EVSLRSGKKFLLTQQADPIDFLSWFLNNLHLALGGSKTKPKSSLIQKIFQGSLRVESQEI 336
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+ R R E+ +SPF+ LT DLPP PLF+D+V +NIIPQV+L T+L
Sbjct: 337 -TARADAGDRLRF---EDTAIKSQQSPFMILTLDLPPAPLFQDDVEKNIIPQVSLTTVLQ 392
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFF-VEKNPTIVNFPVKNV 237
K+N + +E + N R+ + LPP+LI++VKRF N F ++NPTIV F + +
Sbjct: 393 KYNGITAQE----RMNTRMRYRLLHPLPPFLIMHVKRFQPNKFLGSQRNPTIVTFNPRTL 448
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRV 287
D + P+ K + E +Y+LVANI + +GE ++V
Sbjct: 449 DVSPYVEPDPK----------IHPIGEPIVYELVANITYEGVKVRDDSVEGEAERKVWKV 498
Query: 288 HLYHKG-IGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+ +W+E+QDL V + ++ E+YI I++
Sbjct: 499 QVKEGSDSNQWWEMQDLFVEKVNADLLATKESYIMIWK 536
>gi|440635643|gb|ELR05562.1| hypothetical protein GMDG_07482 [Geomyces destructans 20631-21]
Length = 536
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 186/337 (55%), Gaps = 38/337 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+YF+ + + + L +R L+RK+WNPR FK+HVSPHE+LQ
Sbjct: 225 ALSHVPPLRNYFMLDDFSTKPE---------LAKRLSILVRKIWNPRAFKAHVSPHELLQ 275
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
V L S K+F T+Q+DP+DFLSWFLN LH AL G+K K SSI+ + F G +K++++ I
Sbjct: 276 EVSLRSNKKFSLTQQADPVDFLSWFLNNLHVALGGSKTKPGSSIMQQIFQGKLKIESQAI 335
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+ RL E + S FL+LT DLP PLF+DE+ NIIPQV L +IL+
Sbjct: 336 TA---KADAGDRLRFEEAAEVKADVSRFLFLTLDLPAAPLFQDELERNIIPQVPLTSILS 392
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
K++ +E ++ + + + ++KRF++N F E+NPTIV F +N++
Sbjct: 393 KYDGLKAQEQLNHRRRYRLLHPLPPYLLF---HIKRFSQNKFVSERNPTIVTFDARNLNM 449
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRVHL 289
G + P K E YDLVAN++H +GE ++V L
Sbjct: 450 GPYVEPNPK----------YAPPGEPIWYDLVANVIHEAVRGREDSVEGEAERRAWKVQL 499
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
K W +IQDL V +++ L E+Y+QI+E R
Sbjct: 500 RRK--EDWVQIQDLFVEQTQRELLYLGESYLQIWEKR 534
>gi|453081855|gb|EMF09903.1| U4/U6.U5 tri-snRNP-associated protein 2 [Mycosphaerella populorum
SO2202]
Length = 547
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/341 (38%), Positives = 195/341 (57%), Gaps = 42/341 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HVTPLR++ + E +R + LV+RF L+RK+WNP+ FK HVSPHE++Q
Sbjct: 228 ALSHVTPLRNFLMLEDLSSRPE---------LVKRFSVLVRKMWNPKAFKKHVSPHELIQ 278
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F TEQ+DP+DFLSWFLN LH AL G+K K SSI+ K F G++KV++++I
Sbjct: 279 NISLQSGKKFSLTEQADPVDFLSWFLNNLHLALGGSKTKPKSSIIQKIFQGALKVESQEI 338
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+ R R E+ +S ++ LT DLP PLF+D+V +NIIPQV L T+L
Sbjct: 339 -SARADAGDRLRF---EDTAIKSQQSRYMILTLDLPAAPLFQDDVEKNIIPQVPLTTVLQ 394
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFF-VEKNPTIVNFPVKNV 237
K+N +E + N R+ + LPPYLI++VKRF N F ++NPTIV F +++
Sbjct: 395 KYNGIVAQE----RMNTRVRYRLLHPLPPYLIMHVKRFQPNKFLQSQRNPTIVTFNPRSL 450
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRV 287
D G + P+ K E +YDL+AN+ + +GE ++V
Sbjct: 451 DMGPYVEPDPKQ----------HPMGEPIVYDLIANVTYEGVKVRDDSVEGEAERKVWKV 500
Query: 288 HLYHKG-IGKWYEIQ-DLHVTDILPQMITLTEAYIQIYELR 326
+ G +W+E+Q D V + ++ E+Y+ ++E R
Sbjct: 501 QVKEGGNSNQWWEMQDDFPVEKVNADLLATKESYVMVWERR 541
>gi|449295218|gb|EMC91240.1| hypothetical protein BAUCODRAFT_39392 [Baudoinia compniacensis UAMH
10762]
Length = 561
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 193/340 (56%), Gaps = 41/340 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR++F+ E ++ + L QRF L RK+WNP+ FKSHVSPHE++Q
Sbjct: 238 ALVHVPPLRNFFMLEDLSSKPQ---------LAQRFSILTRKIWNPKAFKSHVSPHELIQ 288
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F TEQ+DP++FLSWFLN LH +L G+K K SS+V K F G ++V+++ I
Sbjct: 289 EISLRSSKKFLLTEQADPVEFLSWFLNHLHLSLGGSKTKPRSSLVQKIFQGQLRVESQTI 348
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
RL + ++++ +PF+ LT DLPP PLF+D+ +NIIPQV L T+L
Sbjct: 349 ---TAHADAGDRLRFEDAAIKSQS-TPFMILTLDLPPAPLFQDDAEKNIIPQVPLSTVLQ 404
Query: 180 KFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFF-VEKNPTIVNFPVKNV 237
K+N + +E + N R+ + LP YLI+++KRF N F ++NPTIV F + +
Sbjct: 405 KYNGITAQE----RMNTRMRYRLLHPLPAYLIMHIKRFQPNKFLQSQRNPTIVTFNPRAL 460
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH----------DGEPSNGTYRV 287
D + P + E +YDLVANI + +GE ++V
Sbjct: 461 DMSPYVEPNPQCHPLG----------EPLVYDLVANITYEGVKVRDDSVEGEAERKVWKV 510
Query: 288 HLYHKGIG-KWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
+ G +W+E+QDL+V + ++ E+YI ++E R
Sbjct: 511 QVREGGDSQQWWEMQDLYVDKVNADLLATKESYIMVWERR 550
>gi|367037283|ref|XP_003649022.1| hypothetical protein THITE_2107139 [Thielavia terrestris NRRL 8126]
gi|346996283|gb|AEO62686.1| hypothetical protein THITE_2107139 [Thielavia terrestris NRRL 8126]
Length = 559
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 141/354 (39%), Positives = 200/354 (56%), Gaps = 42/354 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV+PLR+YFL E A + LV+R L RK+WNPR FK+HVSPHE+LQ
Sbjct: 227 ALSHVSPLRNYFLLEDFSAAPE---------LVKRTSILFRKIWNPRAFKAHVSPHELLQ 277
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYKTFLGSMKVKTRKI 119
+ L S K+F T QSDP+DFLSWFLN LH L G+K K SS++ + F G +KV+++ I
Sbjct: 278 EISLQSNKRFTLTTQSDPVDFLSWFLNHLHLGLGGSKTKPGSSVIQRIFQGKLKVESQAI 337
Query: 120 PPVELEEKVRQRLLLTEEYKETETE-SPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
++ R R EE + + + + FL LT DLPP PLF+DE NIIPQV L T+L
Sbjct: 338 TARTDTQQDRLRF---EEAADVKVDIARFLLLTLDLPPTPLFQDEQERNIIPQVPLTTLL 394
Query: 179 TKFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFPVK-N 236
K+N + +E + +R+ + LPP+L+L++KRF+ N F E+NPTIV F + +
Sbjct: 395 AKYNGVTAQELNAQR----RRYRLMHPLPPFLLLHIKRFSHNRFVAERNPTIVTFDARSS 450
Query: 237 VDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD-------------GEPSNG 283
+D + P + + + YDLVAN+VH+ GE
Sbjct: 451 LDLAPFVEPPAEGGGQGAGGPI--------WYDLVANVVHEAVRAREDVADSAVGEERK- 501
Query: 284 TYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTAMSEG 337
T++V L K G+W QDL V I +++ L E+Y+Q++E R P P +G
Sbjct: 502 TWKVQLRDKATGEWVVAQDLFVEKIRSELLYLGESYLQVWERRRGPGPGESEKG 555
>gi|308809297|ref|XP_003081958.1| putative U4/U6.U5 tri-snRNP-associated (ISS) [Ostreococcus tauri]
gi|116060425|emb|CAL55761.1| putative U4/U6.U5 tri-snRNP-associated (ISS) [Ostreococcus tauri]
Length = 308
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 135/342 (39%), Positives = 174/342 (50%), Gaps = 59/342 (17%)
Query: 1 ALCHVTPLR-DYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
AL V PLR LRE + +R G L LM+K+WN +NFK H SPHE L
Sbjct: 7 ALARVGPLRRALLLREEDELNARR--GHHQTSLFSALANLMKKMWNAKNFKGHSSPHEFL 64
Query: 60 QAVVLWSRKQFQFTEQS-------DPIDFLSWFLNTLHR------ALNGTKKKD-SSIVY 105
QAV S++ F + S D + FL W LN L R A N + D SS+V
Sbjct: 65 QAVRKQSKEMFGGVKASKTAATRPDAMQFLRWMLNELIREEKKDIAKNASLSGDISSVVE 124
Query: 106 KTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVL 165
F G +++ P + R+ S FL L+ DLP PLF+D +
Sbjct: 125 ACFQGEVEIVPEGDPDLAASSAPRK-------------TSKFLMLSMDLPAAPLFQDVME 171
Query: 166 ENIIPQVNL-YTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVE 224
+ IIPQV+L +L KF+ +F IT LP YLI+ RFTKN FFVE
Sbjct: 172 KKIIPQVSLERQLLKKFDG--------------TKFRITKLPEYLIVTYSRFTKNNFFVE 217
Query: 225 KNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGT 284
KNPTIV FP + ++ D + D VK ST YDL+ANIVHDG P G+
Sbjct: 218 KNPTIVTFPTRGLNIADHVP-----------IDDVKG---STTYDLIANIVHDGTPDEGS 263
Query: 285 YRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
YR +YH WYE QDL V+++LPQ ++LTE Y+QIY+ R
Sbjct: 264 YRSMVYHASDKNWYETQDLRVSEVLPQQVSLTETYVQIYQRR 305
>gi|67528520|ref|XP_662062.1| hypothetical protein AN4458.2 [Aspergillus nidulans FGSC A4]
gi|40741033|gb|EAA60223.1| hypothetical protein AN4458.2 [Aspergillus nidulans FGSC A4]
Length = 597
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 197/383 (51%), Gaps = 75/383 (19%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV P+R+YFL + P + LV RFG L+RKLWNP+ F+SHVSPHE+LQ
Sbjct: 227 ALAHVLPIRNYFL-------LHEFPQPGTPQLVLRFGTLVRKLWNPKAFRSHVSPHELLQ 279
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTR 117
V L S K+F T+QSDP++FLSWFLN LH AL G++K +S+V+ F G ++++++
Sbjct: 280 EVALRSSKRFTLTQQSDPVEFLSWFLNNLHLALGGSRKPSKTPTSVVHAAFQGHLRIESQ 339
Query: 118 KIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
I + RL+ TE +PFL LT DLPP PLF+ E+IIPQV L T+
Sbjct: 340 AI--TAHSDTQNARLVFTESGTINSQTTPFLILTLDLPPTPLFQSANRESIIPQVPLTTL 397
Query: 178 LTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KN 236
L K+N + E ++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP ++
Sbjct: 398 LNKYNGITASEKLAHR---VRHRLLHPLPPYLMFHIKRFSKNRFVSERNPTIVTFPSPRS 454
Query: 237 VDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD------GEPSNG------- 283
+D ++P V+ E + E +YDLVANI+ D G +
Sbjct: 455 LD----MSPYVEPNPE------IWPPGEPILYDLVANIILDPMITAPGGTEDAAEKGVNA 504
Query: 284 ------------------TYRVHLYHKGIG------------------KWYEIQDLHVTD 307
++ V L+ K + +W EIQDL V
Sbjct: 505 ASGGGASSSGAGAGTEKVSWLVQLHDKAMAAENTSIQNEQHSGEQRGPEWLEIQDLFVKR 564
Query: 308 ILPQMITLTEAYIQIYELRTTPS 330
+ + E Y+ ++E R P
Sbjct: 565 AESETLFTKEGYLMVWERRRVPG 587
>gi|259482726|tpe|CBF77479.1| TPA: snRNP assembly factor, putative (AFU_orthologue; AFUA_4G07520)
[Aspergillus nidulans FGSC A4]
Length = 616
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 197/383 (51%), Gaps = 75/383 (19%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV P+R+YFL + P + LV RFG L+RKLWNP+ F+SHVSPHE+LQ
Sbjct: 246 ALAHVLPIRNYFL-------LHEFPQPGTPQLVLRFGTLVRKLWNPKAFRSHVSPHELLQ 298
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTR 117
V L S K+F T+QSDP++FLSWFLN LH AL G++K +S+V+ F G ++++++
Sbjct: 299 EVALRSSKRFTLTQQSDPVEFLSWFLNNLHLALGGSRKPSKTPTSVVHAAFQGHLRIESQ 358
Query: 118 KIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
I + RL+ TE +PFL LT DLPP PLF+ E+IIPQV L T+
Sbjct: 359 AI--TAHSDTQNARLVFTESGTINSQTTPFLILTLDLPPTPLFQSANRESIIPQVPLTTL 416
Query: 178 LTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KN 236
L K+N + E ++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP ++
Sbjct: 417 LNKYNGITASEKLAHR---VRHRLLHPLPPYLMFHIKRFSKNRFVSERNPTIVTFPSPRS 473
Query: 237 VDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD------GEPSNG------- 283
+D ++P V+ E + E +YDLVANI+ D G +
Sbjct: 474 LD----MSPYVEPNPE------IWPPGEPILYDLVANIILDPMITAPGGTEDAAEKGVNA 523
Query: 284 ------------------TYRVHLYHKGIG------------------KWYEIQDLHVTD 307
++ V L+ K + +W EIQDL V
Sbjct: 524 ASGGGASSSGAGAGTEKVSWLVQLHDKAMAAENTSIQNEQHSGEQRGPEWLEIQDLFVKR 583
Query: 308 ILPQMITLTEAYIQIYELRTTPS 330
+ + E Y+ ++E R P
Sbjct: 584 AESETLFTKEGYLMVWERRRVPG 606
>gi|388582119|gb|EIM22425.1| putative U4/U6.U5 tri-snRNP-associated protein [Wallemia sebi CBS
633.66]
Length = 449
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 194/336 (57%), Gaps = 44/336 (13%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L H+ PLR++FL D L++R+ +++WN + FKS VSPHE+LQ
Sbjct: 146 LTHIRPLRNHFLL----------LNDCKTELLRRYSLFNKRVWNDKLFKSQVSPHEVLQL 195
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
+ S +F SDP++FL++ LN LH+ L G KK +SSI+Y+ F G +++ ++KI
Sbjct: 196 ITKLSANKFNIQNSSDPVEFLTFLLNQLHKDLGGNKKPNSSIIYQLFQGQLRMTSQKIIQ 255
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKF 181
++ E + ++ + +E K T +PFL L+CDLPP P+F D ENIIPQV+L +L K+
Sbjct: 256 LDENEDINKKFI--KEDKVTTINTPFLILSCDLPPKPVFNDN--ENIIPQVSLGDVLKKY 311
Query: 182 NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD 241
+ + +E+ +++++T LP YL+++ KRF+KN F E N TIVN+P+ VDF D
Sbjct: 312 DGVTTQEHLGQS----RQYKLTKLPKYLLIHFKRFSKNRFTSEYNQTIVNYPISGVDFKD 367
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGT------YRVHL-----Y 290
+ +ST + +T+YDLV NI H+ + + G ++ L
Sbjct: 368 YV--------DST-------ENINTVYDLVGNISHEHQATAGDDNNKSKWKCQLKSPMKN 412
Query: 291 HKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
G KW+++QDL V +I ++I L E Y+Q+++ R
Sbjct: 413 DDGSSKWFQLQDLFVEEIDRRLIFLGETYLQVWQRR 448
>gi|224015415|ref|XP_002297362.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220967962|gb|EED86325.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 487
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 192/360 (53%), Gaps = 65/360 (18%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFL-LVQRFGELMRKLWNPRNFKSHVSPHEML 59
AL HV PLRD+FL + +P ++F L + F L+R +W+ FKS+V PH ++
Sbjct: 150 ALAHVRPLRDFFLLAGSQTS-HQPLSYANFSPLAKAFSLLLRNMWSSHRFKSNVDPHMLV 208
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT--KKKDSS----IVYKTFLGSMK 113
QAV + S K++ +Q++ DFL+W L+ LH + G+ KKK SS ++++TF+G ++
Sbjct: 209 QAVSVASNKRYHVGKQAEAGDFLAWLLHQLHVGIGGSVGKKKRSSGGSTVIHQTFMGKVE 268
Query: 114 VKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVN 173
RK E + ++ EE T TE+ FL LT D+P PLFKD +IPQ
Sbjct: 269 TVARKQLKRETLTSLASETVIVEE--STVTETDFLQLTLDIPEKPLFKDADGGLVIPQEP 326
Query: 174 LYTILTKFNNES-------EKEYKTYKENFL----------KRFEITSLPPYLILYVKRF 216
L +L KF+ S +K + N + +R+ + LP YLIL++ RF
Sbjct: 327 LVNVLRKFDGVSFCDALALQKSEEASASNTVDGGSVVVSKKRRYRLKKLPNYLILHLSRF 386
Query: 217 TKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH 276
N F VEKNPTIV FPVKN +DL K YDLVANI H
Sbjct: 387 KHNNFTVEKNPTIVMFPVKN-------------------FDLNK-------YDLVANITH 420
Query: 277 D--------GEPSN----GTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
D G+ N G+YR H+ HK G+WYEIQDL V + +PQ+I ++E+Y+ I+E
Sbjct: 421 DLPAEVGREGKQRNPLEEGSYRCHVQHKATGQWYEIQDLDVRETMPQLIGVSESYLLIFE 480
>gi|342321041|gb|EGU12979.1| Spindle pole body protein [Rhodotorula glutinis ATCC 204091]
Length = 674
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 140/342 (40%), Positives = 190/342 (55%), Gaps = 39/342 (11%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV PLRDY + +++ + + L R G L RKLWNP FKS VSPHE LQ
Sbjct: 316 LLHVPPLRDYLILQLDPSSTSS---RPTSELTTRLGLLARKLWNPHAFKSQVSPHEFLQE 372
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
V S +F+ TEQ DP++FL W LN +HR L G +K SSIVY F G ++V ++I
Sbjct: 373 VANASGGKFKITEQGDPLEFLKWLLNQVHRDLGGGRKPRSSIVYSAFQGEVRVDDQQIIK 432
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKF 181
E + + + E K T+T PFL+L DLPPPPLF+D V NIIPQV + +L+K+
Sbjct: 433 TG-EFGTKPKFDIDREIKSTKT--PFLFLALDLPPPPLFQDAVETNIIPQVPISAVLSKY 489
Query: 182 NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD 241
+ + +E + LKR +IT LPP+LI+Y KRF N F EKNPTIVNFP+K VD +
Sbjct: 490 DGSTTRE--DTQAGVLKRSKITRLPPFLIVYYKRFLSNRFLEEKNPTIVNFPLKGVDMSE 547
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANI--------VHDGEPSNGTYRVHLY--- 290
+ A+ + YDL AN+ + ++VH++
Sbjct: 548 YVD---------------SAETLAAHYDLTANLSLQSSTSTGTTATSPSAEWKVHVHLRN 592
Query: 291 -HKG----IGKWYEIQDLHVTDILPQMITLTEAYIQIYELRT 327
KG KW+E+QDL+V +I M+ L E YIQI+E RT
Sbjct: 593 AEKGKEDEGEKWFEVQDLNVREIEKGMVPLAETYIQIWERRT 634
>gi|443920630|gb|ELU40516.1| spindle pole body protein [Rhizoctonia solani AG-1 IA]
Length = 532
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/344 (38%), Positives = 191/344 (55%), Gaps = 30/344 (8%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFL----------LVQRFGELMRKLWNPRNFK 50
AL HV P+RD FL ++ + V P S LV+RF L +K+WNPR FK
Sbjct: 202 ALLHVPPVRD-FLLAMDGSTVPTPKTKPSAAPIKPVKQPSELVRRFAGLAKKVWNPRLFK 260
Query: 51 SHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLG 110
S VSPHE LQ V S +F+ TEQ DP++FL W LN +H L GTKK+ SS + +G
Sbjct: 261 SQVSPHEFLQEVARVSVGKFKITEQGDPVEFLGWLLNRIHADLGGTKKRGSSEYF--LVG 318
Query: 111 SMKVKTRK-IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENII 169
+ ++T++ I + V+ + E K+T T L L PPLF+D V +NII
Sbjct: 319 TFGLETQQVIVKADAASGVKPHFDIDREIKQTTTPFLLLALDLPP--PPLFQDAVEKNII 376
Query: 170 PQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
PQV+L ++L K++ ++ +E+ LKRF T LPPY+IL+ KRFTKN F E+NPTI
Sbjct: 377 PQVSLASLLAKYDGKTTQEFAGQ----LKRFRCTKLPPYIILHFKRFTKNNFVEERNPTI 432
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP+ VDF +L + +YDLV + + A HD E + +++HL
Sbjct: 433 VNFPIDGVDFSQVLERSPELANAPIIYDLVA----NVTQESAAGTTHDKEST--VWKIHL 486
Query: 290 YHKGIG---KWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G G +W++IQD+ V + +MI L E +Q+ E + S
Sbjct: 487 -RAGRGEREQWFQIQDMIVEETRKEMIFLGETVVQVSEFDSEGS 529
>gi|145351909|ref|XP_001420302.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580536|gb|ABO98595.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 423
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 127/328 (38%), Positives = 170/328 (51%), Gaps = 52/328 (15%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L V PLR L ++ AR + + + ++ +K+WN RNFK H SPHE +Q
Sbjct: 144 SLNRVAPLRRALL--LDDARERED-------VYRALADITKKIWNARNFKGHSSPHEFMQ 194
Query: 61 AVVLWSRKQFQF-TEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKI 119
AV S+ F T D FL W LN L R +K S++ F G +++
Sbjct: 195 AVRNRSKDAFGAETGNHDAAQFLRWLLNELIRDEKKRGEK-RSVIQSCFQGEVEI----- 248
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+++ R SPFL L+ DLP PLF+D + +NIIPQV+L L
Sbjct: 249 ----IDDSSASR------------ASPFLMLSMDLPNAPLFQDVMEKNIIPQVSLERALL 292
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
K + + KT + RF+IT LP YLI+ RFTKN FFVEKNPTIV FP + ++
Sbjct: 293 KKFDGVTADPKTRR-----RFKITKLPNYLIVNYSRFTKNNFFVEKNPTIVTFPTRGLNL 347
Query: 240 GD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWY 298
D I P + S YDL+ANIVHDG P +G+YR +YH WY
Sbjct: 348 ADHIPVP--------------RGDENSATYDLIANIVHDGAPDDGSYRAMVYHAPDKNWY 393
Query: 299 EIQDLHVTDILPQMITLTEAYIQIYELR 326
E QDL V ++LPQ + LTE Y+QIYE R
Sbjct: 394 ETQDLRVAEVLPQQVNLTETYVQIYERR 421
>gi|403222446|dbj|BAM40578.1| ubiquitin carboxyl-terminal hydrolase [Theileria orientalis strain
Shintoku]
Length = 1027
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/318 (37%), Positives = 175/318 (55%), Gaps = 36/318 (11%)
Query: 2 LCHVTPLRDYFLR-EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+C VTPLRD FL ++N + PP +VQ L+RK++N RNFK VSPHE +Q
Sbjct: 244 MCVVTPLRDLFLLFDVNKVQ---PPDAVITTMVQ----LIRKIFNTRNFKGIVSPHEFVQ 296
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+V + S ++ QSDP SW L +H+ L K+S +V + F G + VKT +
Sbjct: 297 SVGVASNGVYKIGVQSDPASLFSWLLARIHQKLQNRNTKES-VVTRAFGGELLVKTLRGT 355
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
E E K PF LT +P P+FKD + N IPQV ++ +L K
Sbjct: 356 RWESERK------------------PFRMLTLVVPEAPIFKDSMDTNAIPQVPIFDLLAK 397
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
++ + E + + +++++ LP YL+L +KRFTKN FF+EKNPTIV+FP+KN+D
Sbjct: 398 YDGKMES---VNTQGEVAKYKLSKLPEYLVLVIKRFTKNNFFLEKNPTIVSFPMKNLDLS 454
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ + + +ST YDL+ NI H+G P GT++V +YH W+++
Sbjct: 455 EYMVEGGSQGGGNG------GSGQSTKYDLICNISHEGTPKGGTFKVQVYHTPSNNWFQM 508
Query: 301 QDLHVTDILPQMITLTEA 318
+DL VT ILPQ + LTE
Sbjct: 509 EDLLVTSILPQQVALTEC 526
>gi|164661019|ref|XP_001731632.1| hypothetical protein MGL_0900 [Malassezia globosa CBS 7966]
gi|159105533|gb|EDP44418.1| hypothetical protein MGL_0900 [Malassezia globosa CBS 7966]
Length = 376
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 197/359 (54%), Gaps = 53/359 (14%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDS---SFLLVQRFGELMRKLWNPRNFKSHVSPHE 57
AL HV PLR+YFL+ N D+ S LV+RF L+R+LWNPR FKS VSPHE
Sbjct: 7 ALAHVPPLRNYFLQSGN-GDASASASDTLPQSTELVRRFATLIRRLWNPRAFKSQVSPHE 65
Query: 58 MLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT---KKKDSSIVYKTFLGSMKV 114
LQ V S+ +F+ TE DP++FL W LN LH L G+ +K SI+ + F G++++
Sbjct: 66 FLQEVTEASQGRFRLTEPCDPVEFLGWLLNRLHMDLVGSGSKARKQPSIITECFRGALRL 125
Query: 115 KTRK-IPPVELEEKV-----------RQRLLLTEEYKETE---------TESPFLYLTCD 153
+++K I LE+ R+ +E+ + + PFL L D
Sbjct: 126 ESQKVIVRTGLEDDDDLVVDKLDHDGRRAGGQQDEFGHAKFNIDKAIKVDQVPFLLLAID 185
Query: 154 LPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYV 213
LPP P+F+D V +NIIPQV + +L K++ + +E ++R +IT LPPYLI++
Sbjct: 186 LPPLPVFQDVVADNIIPQVPIAHLLAKYDGTTIQE----SHGLIRRHKITRLPPYLIIHF 241
Query: 214 KRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVA 272
+RFT N F E+N TIVNFP + D + PE L ++ ++Y+L+A
Sbjct: 242 RRFTHNRFVDERNTTIVNFPPVGLQLQDYVDAPE-----------LNESPRLGSVYNLLA 290
Query: 273 NIVHDGEPSNGT------YRVHLYHKGIG-KWYEIQDLHVTDILPQMITLTEAYIQIYE 324
NI H E + GT +R ++ + +W+++QDL V + QM+ L E+Y+QI+E
Sbjct: 291 NITH--EATAGTVRDQSVWRAQVHTRAQREQWFQMQDLIVEPVNRQMLFLGESYVQIWE 347
>gi|156085110|ref|XP_001610038.1| u4/u6.u5 tri-snRNP-associated 65 kDa protein [Babesia bovis T2Bo]
gi|154797290|gb|EDO06470.1| u4/u6.u5 tri-snRNP-associated 65 kDa protein, putative [Babesia
bovis]
Length = 470
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/314 (37%), Positives = 178/314 (56%), Gaps = 39/314 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
LC V +R+Y L ++ R+ +PP + LV EL+RK++N +NFK VSPHE LQ
Sbjct: 177 VLCTVATVRNYLLL-LDIDRI-QPPDNVISTLV----ELIRKIYNTKNFKGIVSPHEFLQ 230
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV + S+ ++ +DP+ L+W LN L L K K+S IV K F G + V T+
Sbjct: 231 AVGVASKGLYKIGVHNDPVALLTWLLNRLDTKLRNKKTKES-IVAKAFGGQLNVYTQ--- 286
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
+ T+ +PF +T D+P P+FKD+ +NIIPQV+++ +L K
Sbjct: 287 ---------------DGDNWTQKITPFKMITLDVPNAPIFKDDKEKNIIPQVSIFQLLQK 331
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
F ES T L +++I LP YL++ +KRFTKN FF+EKNPTIV+FP+KN+D G
Sbjct: 332 FQGESAH---TSPNGELCKYKIWKLPDYLVINIKRFTKNNFFIEKNPTIVSFPMKNLDMG 388
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
+ + K+ ++ + + YDL ++ H G P +G Y++H+ H G WYE+
Sbjct: 389 --IYIDDKSPFKGDI---------NARYDLACSVCHQGNPESGRYKIHVLHPPTGDWYEL 437
Query: 301 QDLHVTDILPQMIT 314
+DL VT +LPQ +
Sbjct: 438 EDLLVTSVLPQFVA 451
>gi|134058466|emb|CAL00675.1| unnamed protein product [Aspergillus niger]
Length = 577
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 192/343 (55%), Gaps = 38/343 (11%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R+YFL + P + L RF L+RKLWNP+ F+SHVSPHE+LQ
Sbjct: 248 LAHVFPIRNYFL-------LHEFPQPGTPQLALRFSTLVRKLWNPKAFRSHVSPHELLQE 300
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTRK 118
+ L S K+F T+QSDP++F+SWFLN LH +L G+KK +S+V F G ++++++
Sbjct: 301 IALRSSKRFTLTQQSDPVEFMSWFLNNLHLSLGGSKKPSKTPTSVVQAAFQGHLRIESQA 360
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ TE +PFL LT DLPP PLF+ E+IIPQV L T+L
Sbjct: 361 I--TAHSDTQNARLVFTESGSINSQTTPFLILTLDLPPTPLFQSANRESIIPQVPLTTLL 418
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E ++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +++
Sbjct: 419 NKYNGITASEKLAHR---VRHRLLHPLPPYLLFHIKRFSKNRFVSERNPTIVTFPSPRSL 475
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD---GEPS----NGTYRVHLY 290
D ++P V+ E + E +YDLVANI+ D P+ NG R+
Sbjct: 476 D----MSPYVEPNPE------IWPPGEPILYDLVANIILDPTVAAPAMSAENG--RLQKE 523
Query: 291 HKGIGK---WYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
H G + W EIQDL V + + E Y+ ++E R P
Sbjct: 524 HAGEQRGPEWLEIQDLFVKRAESETLFTKEGYLMVWERRKVPG 566
>gi|392870120|gb|EAS27281.2| snRNP assembly factor [Coccidioides immitis RS]
Length = 606
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/388 (34%), Positives = 193/388 (49%), Gaps = 81/388 (20%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL + R P + L RFG L+RKLWNP+ FK HVSPHE+LQ
Sbjct: 235 LAHVRPIRNFFL-------LHRFPVPGTPQLPLRFGMLVRKLWNPKAFKCHVSPHELLQE 287
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTRK 118
+ L S K+F T QSDP++FLSWFLN LH +L G+KK +S+V+ F G ++++++
Sbjct: 288 IALRSSKRFTLTHQSDPVEFLSWFLNNLHLSLGGSKKPSRTPTSVVHSAFQGHLRIESQA 347
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ +E T +PFL LT DLPP PLF+ E+IIPQV L +L
Sbjct: 348 I--TARSDAANARLVFSESSTTTSQRTPFLILTLDLPPTPLFQAADEESIIPQVPLVNLL 405
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E ++ ++ + LP YL+ ++KRF+KN F E+NPTIV FP + +
Sbjct: 406 NKYNGVTAIEKLAHR---VRHRLLHPLPQYLLFHIKRFSKNKFVAERNPTIVTFPSPRGL 462
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD------GEP----------- 280
D + P V E +YDLVAN++ D G+P
Sbjct: 463 DMSPYVEPNPS----------VWPPGEPILYDLVANVILDATVTAPGDPESRAPENSRGG 512
Query: 281 ----------------------SNGTYRVH----LYHKGIG------------KWYEIQD 302
S G+++V+ L+ K + +W EIQD
Sbjct: 513 LAEAAASGAGGAASATATTPGASAGSHKVNWLIQLHDKAMAVENAKEQTQSGPEWLEIQD 572
Query: 303 LHVTDILPQMITLTEAYIQIYELRTTPS 330
L V + + E Y+ ++E R S
Sbjct: 573 LWVQKTESETLFTREGYLMVWERRKVKS 600
>gi|303314851|ref|XP_003067434.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240107102|gb|EER25289.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|320037789|gb|EFW19726.1| snRNP assembly factor [Coccidioides posadasii str. Silveira]
Length = 606
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/388 (34%), Positives = 193/388 (49%), Gaps = 81/388 (20%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL + R P + L RFG L+RKLWNP+ FK HVSPHE+LQ
Sbjct: 235 LAHVRPIRNFFL-------LHRFPVPGTPQLPLRFGMLVRKLWNPKAFKCHVSPHELLQE 287
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTRK 118
+ L S K+F T QSDP++FLSWFLN LH +L G+KK +S+V+ F G ++++++
Sbjct: 288 IALRSSKRFTLTHQSDPVEFLSWFLNNLHLSLGGSKKPSPTPTSVVHSAFQGHLRIESQA 347
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ +E T +PFL LT DLPP PLF+ E+IIPQV L +L
Sbjct: 348 I--TARSDAANARLVFSESSTTTSQRTPFLILTLDLPPTPLFQAADEESIIPQVPLVNLL 405
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E ++ ++ + LP YL+ ++KRF+KN F E+NPTIV FP + +
Sbjct: 406 NKYNGVTAIEKLAHR---VRHRLLHPLPQYLLFHIKRFSKNKFVAERNPTIVTFPSPRGL 462
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD------GEP----------- 280
D + P V E +YDLVAN++ D G+P
Sbjct: 463 DMSPYVEPNPS----------VWPPGEPILYDLVANVILDATVTAPGDPESRAPENSRGG 512
Query: 281 ----------------------SNGTYRVH----LYHKGIG------------KWYEIQD 302
S G+++V+ L+ K + +W EIQD
Sbjct: 513 LAEAAASGAGGAASATATTPGASAGSHKVNWLIQLHDKAMAVENAKEQTQSGPEWLEIQD 572
Query: 303 LHVTDILPQMITLTEAYIQIYELRTTPS 330
L V + + E Y+ ++E R S
Sbjct: 573 LWVQKTESETLFTREGYLMVWERRKVKS 600
>gi|119175368|ref|XP_001239925.1| conserved hypothetical protein [Coccidioides immitis RS]
Length = 787
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/388 (34%), Positives = 193/388 (49%), Gaps = 81/388 (20%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL + R P + L RFG L+RKLWNP+ FK HVSPHE+LQ
Sbjct: 416 LAHVRPIRNFFL-------LHRFPVPGTPQLPLRFGMLVRKLWNPKAFKCHVSPHELLQE 468
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTRK 118
+ L S K+F T QSDP++FLSWFLN LH +L G+KK +S+V+ F G ++++++
Sbjct: 469 IALRSSKRFTLTHQSDPVEFLSWFLNNLHLSLGGSKKPSRTPTSVVHSAFQGHLRIESQA 528
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ +E T +PFL LT DLPP PLF+ E+IIPQV L +L
Sbjct: 529 I--TARSDAANARLVFSESSTTTSQRTPFLILTLDLPPTPLFQAADEESIIPQVPLVNLL 586
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E ++ ++ + LP YL+ ++KRF+KN F E+NPTIV FP + +
Sbjct: 587 NKYNGVTAIEKLAHR---VRHRLLHPLPQYLLFHIKRFSKNKFVAERNPTIVTFPSPRGL 643
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD------GEP----------- 280
D + P V E +YDLVAN++ D G+P
Sbjct: 644 DMSPYVEPNPS----------VWPPGEPILYDLVANVILDATVTAPGDPESRAPENSRGG 693
Query: 281 ----------------------SNGTYRVH----LYHKGIG------------KWYEIQD 302
S G+++V+ L+ K + +W EIQD
Sbjct: 694 LAEAAASGAGGAASATATTPGASAGSHKVNWLIQLHDKAMAVENAKEQTQSGPEWLEIQD 753
Query: 303 LHVTDILPQMITLTEAYIQIYELRTTPS 330
L V + + E Y+ ++E R S
Sbjct: 754 LWVQKTESETLFTREGYLMVWERRKVKS 781
>gi|425781824|gb|EKV19768.1| hypothetical protein PDIG_01090 [Penicillium digitatum PHI26]
gi|425782954|gb|EKV20832.1| hypothetical protein PDIP_12410 [Penicillium digitatum Pd1]
Length = 608
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 161/280 (57%), Gaps = 26/280 (9%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL + P + ++ RF L+RKLWNP+ F+SHVSPHE+LQ
Sbjct: 241 LAHVLPIRNFFL-------LHEFPTPGTPEIILRFSTLVRKLWNPKAFRSHVSPHELLQE 293
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDS---SIVYKTFLGSMKVKTRK 118
+ L S K+F T Q+DP+DFLSWFLN LH AL G+KK S S+V+ F G ++++++
Sbjct: 294 IALRSSKRFTLTNQADPVDFLSWFLNCLHLALGGSKKPSSTPTSVVHAAFQGRVRIESQA 353
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ TE +PFL LT DLPP PLF+ E+ IPQV L T+L
Sbjct: 354 I--TAHSDTQNARLVFTESGTINSQVTPFLILTLDLPPTPLFQSANRESSIPQVPLTTLL 411
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E ++ ++ + LPPYL ++KRF+KN F E+NPTIV FP N+
Sbjct: 412 NKYNGYTASEKLAHR---VRHRLLHPLPPYLFFHIKRFSKNRFVSERNPTIVTFPSPHNL 468
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD 277
D + P + + E +YDLVANI+ D
Sbjct: 469 DMSPYVEPNPN----------ICSPGEPILYDLVANIILD 498
>gi|399216416|emb|CCF73104.1| unnamed protein product [Babesia microti strain RI]
Length = 461
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/324 (38%), Positives = 180/324 (55%), Gaps = 43/324 (13%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
LC V PLRD L + ++ +P +V+ EL+RK++NP NFK VSPHE LQ+
Sbjct: 178 LCCVKPLRDKMLT-FDTGKLSKPD-----RVVETLSELIRKIYNPNNFKGIVSPHEFLQS 231
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
+ L S+ +++ QSDP FL W +H L K +SSIV F G + + T +
Sbjct: 232 IGLASKGKYRIGNQSDPAVFLQWLFVWIHSKLK-RKGTNSSIVTDCFQGELFI-TEHVGD 289
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKF 181
E+E+K ++PF LT ++P +F D N I Q+ +Y + KF
Sbjct: 290 -EMEQK----------------KTPFKLLTLEIPQMSVFNDA---NAISQIPIYDLFYKF 329
Query: 182 NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD 241
+ + E + K + I LP YLI+ VKRF KN FFVEKN TIV FP+K+++
Sbjct: 330 DGNTPNETEVGK---FCTYSIWRLPEYLIIIVKRFYKNNFFVEKNSTIVTFPLKSLNMSS 386
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQ 301
L P D V+ T Y+LVA+I H G+P NG+Y+V++ H+ G WYE++
Sbjct: 387 CLHP-----------DAVQLN-PLTKYNLVASITHVGQPENGSYKVYVCHQPTGDWYEVE 434
Query: 302 DLHVTDILPQMITLTEAYIQIYEL 325
DL VT +L Q++TL+EAY+QIY+L
Sbjct: 435 DLLVTPVLAQLVTLSEAYVQIYQL 458
>gi|443896604|dbj|GAC73948.1| spindle pole body protein - Sad1p [Pseudozyma antarctica T-34]
Length = 637
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/379 (34%), Positives = 190/379 (50%), Gaps = 65/379 (17%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLRD+FLR+ + G S LV RFG L+RK+WNPR FK VSPHE LQ
Sbjct: 276 ALVHVRPLRDFFLRQH-----EAQAGTSE--LVARFGALVRKIWNPRAFKPQVSPHEFLQ 328
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRAL-----NGTKKKDSS-----IVYKTFLG 110
V S +F+ TEQ+DP++FL W LN LH L G K+K ++ I+ + F G
Sbjct: 329 QVAQVSHNRFKITEQADPVEFLGWLLNRLHADLASPGGKGAKRKRTAVGVETIISRCFQG 388
Query: 111 SMKVKTRKIPPVELEEK-----------------------VRQRLLLTEEYKETETESPF 147
++V+++ + VE E R K +SPF
Sbjct: 389 VVQVESQPLEKVEKPEDDAAVAAQAERLANGAGPTGGQVDGNGRACFDPAGKVERKDSPF 448
Query: 148 LYLTCDLP-PPPLFK---DEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEIT 203
L+ DLP PPP+ D+ +++PQV + +L K++ S L ++++
Sbjct: 449 FLLSMDLPTPPPVLGTDGDDESASLVPQVTIGQLLAKYDGTSLHASHAR----LSKYQLR 504
Query: 204 SLPPYLILYVKRFTKNTFF-VEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAK 262
LPP+L+L+ +RFTKN+ E+NPT+VNFP N+D A T + A
Sbjct: 505 RLPPFLVLHFRRFTKNSLGQTERNPTLVNFPTTNLDVSRYAPLLPAADAMDTDSPIANA- 563
Query: 263 YESTMYDLVANIVHDGEPS----NGTYRVHLY------HKGIGKWYEIQDLHVTDILPQM 312
YDLVAN+V+D P N ++ H++ + KW+ I DL V I P M
Sbjct: 564 -----YDLVANVVYDATPGTVNENAAWKSHVHTSPANRKQNAPKWFAIHDLIVDPIDPHM 618
Query: 313 ITLTEAYIQIYELRTTPSP 331
I L E+++QI++ R++ P
Sbjct: 619 IFLAESHLQIWQKRSSSPP 637
>gi|255950052|ref|XP_002565793.1| Pc22g18900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592810|emb|CAP99178.1| Pc22g18900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 609
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 164/279 (58%), Gaps = 24/279 (8%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL + P + ++ RF L+RKLWNP+ F+SHVSPHE+LQ
Sbjct: 242 LAHVLPIRNFFL-------LHEFPTPGTPEIILRFSTLVRKLWNPKAFRSHVSPHELLQE 294
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTRK 118
V + S K+F T Q+DP+DFLSWFLN+LH AL G+KK +S+V+ F G ++++++
Sbjct: 295 VAVRSSKRFTLTNQADPVDFLSWFLNSLHLALGGSKKPSPTPTSVVHAAFQGRVRIESQA 354
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ TE +PFL LT DLPP PLF+ E+ IPQV L T+L
Sbjct: 355 I--TAHSDTQNARLVFTESGTINSQVTPFLILTLDLPPTPLFQSANRESSIPQVPLTTLL 412
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K+N + E ++ ++ + LPPYL ++KRF+KN F E+NPTIV FP +
Sbjct: 413 NKYNGYTASEKLAHR---VRHRLLHPLPPYLFFHIKRFSKNRFVSERNPTIVTFPSPH-- 467
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD 277
G ++P V+ + + E +YDLVANI+ D
Sbjct: 468 -GLDMSPYVEPNPN------ICSPSEPILYDLVANIILD 499
>gi|261201494|ref|XP_002627147.1| snRNP assembly factor [Ajellomyces dermatitidis SLH14081]
gi|239592206|gb|EEQ74787.1| snRNP assembly factor [Ajellomyces dermatitidis SLH14081]
Length = 615
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 119/281 (42%), Positives = 169/281 (60%), Gaps = 26/281 (9%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL + + P + L RFG L+RKLWNPR F+SHVSPHE+LQ
Sbjct: 244 LAHVRPIRNFFL-------LHQFPTPGTPQLPLRFGILVRKLWNPRAFRSHVSPHELLQE 296
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK---KDSSIVYKTFLGSMKVKTRK 118
V L S K+F T+QSDP+DFLSWFLN LH L G+KK K +S+++ F G ++++++
Sbjct: 297 VALRSSKRFTLTQQSDPVDFLSWFLNNLHLTLGGSKKPSPKPTSVIHSAFQGQLRIESQA 356
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ +E + T +PFL LT DLPP PLF+ E+IIPQV L T+L
Sbjct: 357 I--TARSDAANARLVFSESMETTSQTTPFLILTLDLPPTPLFQSTNTESIIPQVPLTTLL 414
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N E +++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +++
Sbjct: 415 NKYNGLVASEKLSHR---VRHRLLHPLPPYLLFHIKRFSKNKFVSERNPTIVTFPSPRSL 471
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG 278
D + P DL A E +YDLVAN++ D
Sbjct: 472 DMSPYVEPNP---------DLYPAG-EPILYDLVANVILDA 502
>gi|239611636|gb|EEQ88623.1| snRNP assembly factor [Ajellomyces dermatitidis ER-3]
gi|327348352|gb|EGE77209.1| SnRNP assembly factor [Ajellomyces dermatitidis ATCC 18188]
Length = 615
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 119/281 (42%), Positives = 169/281 (60%), Gaps = 26/281 (9%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL + + P + L RFG L+RKLWNPR F+SHVSPHE+LQ
Sbjct: 244 LAHVRPIRNFFL-------LHQFPTPGTPQLPLRFGILVRKLWNPRAFRSHVSPHELLQE 296
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK---KDSSIVYKTFLGSMKVKTRK 118
V L S K+F T+QSDP+DFLSWFLN LH L G+KK K +S+++ F G ++++++
Sbjct: 297 VALRSSKRFTLTQQSDPVDFLSWFLNNLHLTLGGSKKPSPKPTSVIHSAFQGQLRIESQA 356
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ +E + T +PFL LT DLPP PLF+ E+IIPQV L T+L
Sbjct: 357 I--TARSDAANARLVFSESMETTSQTTPFLILTLDLPPTPLFQSTNTESIIPQVPLTTLL 414
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N E +++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +++
Sbjct: 415 NKYNGLVASEKLSHR---VRHRLLHPLPPYLLFHIKRFSKNKFVSERNPTIVTFPSPRSL 471
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG 278
D + P DL A E +YDLVAN++ D
Sbjct: 472 DMSPYVEPNP---------DLYPAG-EPILYDLVANVILDA 502
>gi|154279092|ref|XP_001540359.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412302|gb|EDN07689.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 616
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 168/281 (59%), Gaps = 26/281 (9%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL + + P + L RFG L+RKLWNPR FKSHVSPHE+LQ
Sbjct: 240 LSHVRPIRNFFL-------LHQFPMPGTPQLPLRFGILVRKLWNPRAFKSHVSPHELLQE 292
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTRK 118
V L S K+F T+QSDP+DFLSWFLN LH +L G+KK +S+++ F G ++++++
Sbjct: 293 VALRSSKRFTLTQQSDPVDFLSWFLNNLHLSLGGSKKPSPTPTSVIHSAFQGHLRIESQA 352
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ +E + T +PFL LT DLPP PLF+ E+IIPQ+ L T+L
Sbjct: 353 I--TARSDAANARLVFSESSETTSQTTPFLILTLDLPPTPLFQSTNAESIIPQIPLTTLL 410
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N E +++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +++
Sbjct: 411 NKYNGLVASEKLSHR---VRHRLLHPLPPYLLFHIKRFSKNKFVSERNPTIVTFPSPRSL 467
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG 278
D + P V + E +YDLVAN++ D
Sbjct: 468 DMSPYVEPNPS----------VCSAGEPILYDLVANVILDA 498
>gi|325092320|gb|EGC45630.1| proteasome component [Ajellomyces capsulatus H88]
Length = 805
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 168/281 (59%), Gaps = 26/281 (9%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL + + P + L RFG L+RKLWNPR FKSHVSPHE+LQ
Sbjct: 429 LSHVRPIRNFFL-------LHQFPMPGTPQLPLRFGILVRKLWNPRAFKSHVSPHELLQE 481
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTRK 118
V L S K+F T+QSDP+DFLSWFLN LH +L G+KK +S+++ F G ++++++
Sbjct: 482 VALRSSKRFTLTQQSDPVDFLSWFLNNLHLSLGGSKKPSPTPTSVIHSAFQGHLRIESQA 541
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ +E + T +PFL LT DLPP PLF+ E+IIPQ+ L T+L
Sbjct: 542 I--TARSDAANARLVFSESSETTSQTTPFLILTLDLPPTPLFQSTNAESIIPQIPLTTLL 599
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N E +++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +++
Sbjct: 600 NKYNGLVASEKLSHR---VRHRLLHPLPPYLLFHIKRFSKNKFVSERNPTIVTFPSPRSL 656
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG 278
D + P V + E +YDLVAN++ D
Sbjct: 657 DMSPYVEPNPS----------VCSAGEPILYDLVANVILDA 687
>gi|225562344|gb|EEH10623.1| proteasome component C11 [Ajellomyces capsulatus G186AR]
Length = 805
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 168/281 (59%), Gaps = 26/281 (9%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL + + P + L RFG L+RKLWNPR FKSHVSPHE+LQ
Sbjct: 429 LSHVRPIRNFFL-------LHQFPMPGTPQLPLRFGILVRKLWNPRAFKSHVSPHELLQE 481
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTRK 118
V L S K+F T+QSDP+DFLSWFLN LH +L G+KK +S+++ F G ++++++
Sbjct: 482 VALRSSKRFTLTQQSDPVDFLSWFLNNLHLSLGGSKKPSPTPTSVIHSAFQGHLRIESQA 541
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ +E + T +PFL LT DLPP PLF+ E+IIPQ+ L T+L
Sbjct: 542 I--TARSDAANARLVFSESSETTSQTTPFLILTLDLPPTPLFQSTNAESIIPQIPLTTLL 599
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N E +++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +++
Sbjct: 600 NKYNGLVASEKLSHR---VRHRLLHPLPPYLLFHIKRFSKNKFVSERNPTIVTFPSPRSL 656
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG 278
D + P V + E +YDLVAN++ D
Sbjct: 657 DMSPYVEPNPS----------VCSAGEPILYDLVANVILDA 687
>gi|320588581|gb|EFX01049.1| snRNP assembly protein [Grosmannia clavigera kw1407]
Length = 566
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/394 (34%), Positives = 192/394 (48%), Gaps = 79/394 (20%)
Query: 1 ALCHVTPLRDYFL-----------REINYARV--KRPPGDSSFLLVQRFGELMRKLWNPR 47
AL HV PLR++FL R N A KRP ++ LV+RFG L+RK+WNPR
Sbjct: 190 ALAHVPPLRNFFLLDEVAAQEARRRSSNTATTGEKRPEAAANRELVRRFGLLVRKIWNPR 249
Query: 48 NFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-DSSIVYK 106
FK+HVSPHE+LQ V L S K+F T QSDP DFL+WFLN LH L G++ + SSIV +
Sbjct: 250 AFKAHVSPHELLQEVALRSSKRFTLTAQSDPADFLAWFLNHLHLGLGGSRSRPASSIVQR 309
Query: 107 TFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPL------- 159
F G ++V++ + V + + + Y T P
Sbjct: 310 VFQGRVRVRSETLAAVGARAAAAAADDAMQVDDDDNNDKASSYHTSGPLPATASPSLPPP 369
Query: 160 ----------FKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITS-LPPY 208
DE NIIPQV L +L K++ ES +E + + +RF + + LPPY
Sbjct: 370 PPPSSSIPPPPGDEQERNIIPQVPLAALLAKYDGESARE----QGDVRRRFRLQAPLPPY 425
Query: 209 LILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTM- 267
L+L++KRF+ N F E+NPTIV F +D + P V + S +S +
Sbjct: 426 LVLHIKRFSANKFVAERNPTIVTFDPLGLD----MRPFVDGEPGSA---------DSPIP 472
Query: 268 YDLVANIVHDGEPSNG------------TYRVHLYHKGI-----------------GKWY 298
YDLVAN+VH+ + G T++V L + KW
Sbjct: 473 YDLVANVVHEAVRAGGDDVAVDSAEERRTWKVQLRERQAAGATPPALAAPATAAEQDKWV 532
Query: 299 EIQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
+QDL V + +++ L E+YIQI+E R +P+
Sbjct: 533 VVQDLFVEPVAGELLYLAESYIQIWERRRPSAPS 566
>gi|226497272|ref|NP_001152034.1| LOC100285671 [Zea mays]
gi|195652005|gb|ACG45470.1| USP39 protein [Zea mays]
Length = 552
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/291 (45%), Positives = 176/291 (60%), Gaps = 29/291 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L VTPLR++FL NY K P LV RFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 234 SLMRVTPLRNFFLIPENYQHSKSP-------LVHRFGELTRKIWHARNFKGQVSPHEFLQ 286
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV+ S K+FQ QSDP++F++W LNTLH L +KKK+ SI++ F G ++V +++
Sbjct: 287 AVMKASDKKFQIGVQSDPVEFMTWLLNTLHAKLKSSKKKNRSIIHDCFQGELEV-VKEVH 345
Query: 121 PVELEEKVRQRLLLTEEYKE---------TETES-PFLYLTCDLPPPPLFKDEVLENIIP 170
+ EK L E TET PFL L DLPPPPLFKD + +NIIP
Sbjct: 346 RKHIMEKREDGGELNGEAGSVVGTADGIVTETSKVPFLMLGLDLPPPPLFKDAMEKNIIP 405
Query: 171 QVNLYTILTKFNNESEKEYKTYKENFLK-RFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
QV L+ IL KF+ E+ E + + + R+ +T LP YLIL+++RFTKN FFVEKNPT+
Sbjct: 406 QVPLFNILKKFDGETVTE--VVRPSIARMRYRVTRLPKYLILHMRRFTKNNFFVEKNPTL 463
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYE-STMYDLVKAKYESTMYDLVANIVHDG 278
VNFPVKN++ D I P+ K ++ + YDL+ ++AN+ D
Sbjct: 464 VNFPVKNLELKDYIPLPKPKENHKLRSKYDLI------ANMSMMANLARDA 508
>gi|413934600|gb|AFW69151.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 552
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/291 (45%), Positives = 176/291 (60%), Gaps = 29/291 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L VTPLR++FL NY K P LV RFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 234 SLMRVTPLRNFFLIPENYQHSKSP-------LVHRFGELTRKIWHARNFKGQVSPHEFLQ 286
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV+ S K+FQ QSDP++F++W LNTLH L +KKK+ SI++ F G ++V +++
Sbjct: 287 AVMKASDKKFQIGVQSDPVEFMTWLLNTLHAKLKSSKKKNRSIIHDCFQGELEV-VKEVH 345
Query: 121 PVELEEKVRQRLLLTEEYKE---------TETES-PFLYLTCDLPPPPLFKDEVLENIIP 170
+ EK L E TET PFL L DLPPPPLFKD + +NIIP
Sbjct: 346 RKHIMEKREDGGELNGEAGSVVGTADGIVTETSKVPFLMLGLDLPPPPLFKDAMEKNIIP 405
Query: 171 QVNLYTILTKFNNESEKEYKTYKENFLK-RFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
QV L+ IL KF+ E+ E + + + R+ +T LP YLIL+++RFTKN FFVEKNPT+
Sbjct: 406 QVPLFNILKKFDGETVTE--VVRPSIARMRYRVTRLPKYLILHMRRFTKNNFFVEKNPTL 463
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYE-STMYDLVKAKYESTMYDLVANIVHDG 278
VNFPVKN++ D I P+ K ++ + YDL+ ++AN+ D
Sbjct: 464 VNFPVKNLELKDYIPLPKPKENHKLRSKYDLI------ANLSMMANLARDA 508
>gi|302501618|ref|XP_003012801.1| hypothetical protein ARB_01052 [Arthroderma benhamiae CBS 112371]
gi|291176361|gb|EFE32161.1| hypothetical protein ARB_01052 [Arthroderma benhamiae CBS 112371]
Length = 604
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 193/386 (50%), Gaps = 76/386 (19%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL + P S+ L RFG L+RKLWNPR FK+HVSPHE+LQ
Sbjct: 240 LAHVRPIRNFFL-------LHDFPALSTPQLPLRFGVLVRKLWNPRAFKAHVSPHELLQE 292
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK---KDSSIVYKTFLGSMKVKTRK 118
V + S K+F T+QSDPI+FLSWFLN LH L G+KK K +S++ F G ++++++
Sbjct: 293 VAIRSSKRFTLTKQSDPIEFLSWFLNNLHLTLGGSKKPSSKPTSVIQSAFHGKLRIESQA 352
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ +E T +PFL LT DLPP PLF+ ++IIPQV L T+L
Sbjct: 353 I--TARSDSANARLVFSESSTTTSQVNPFLMLTLDLPPTPLFQSSNKDSIIPQVPLTTLL 410
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E ++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +
Sbjct: 411 NKYNGITASEKLAHR---VRHRLLHPLPPYLLFHIKRFSKNKFVAERNPTIVTFPSPHGL 467
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD------GEPSNG-------- 283
D + P+ V E +YDLVAN++ D G P N
Sbjct: 468 DMSPYVEPDPS----------VCPPGEPIIYDLVANVILDAAVNVPGGPENAANSAETAK 517
Query: 284 ------------------------TYRVHLYHKGIG------------KWYEIQDLHVTD 307
++ + LY K + +W E QDL V
Sbjct: 518 DLTETGPSAASTTTPGAAAGNHKVSWLIQLYDKAMATENAQQQQQKGPEWLEAQDLWVKR 577
Query: 308 ILPQMITLTEAYIQIYELRTTPSPTA 333
+ + E Y+ ++E R T P +
Sbjct: 578 TESETLFTREGYLMVWERRKTKPPGS 603
>gi|388855294|emb|CCF51188.1| related to SAD1-protein required for assembly of U4 snRNA into the
U4/U6 particle [Ustilago hordei]
Length = 643
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 200/388 (51%), Gaps = 76/388 (19%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV +RDYFL E K G+ S LV+RFG L+RK+WNPR FK VSPHE LQ
Sbjct: 273 ALVHVPVVRDYFLEE---KERKDGKGERS-ELVKRFGALVRKMWNPRAFKPQVSPHEFLQ 328
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNG---------TKKK-----DSSIVYK 106
V S +F+ T QSDP++FL W LN LH L K+K SI+ +
Sbjct: 329 QVAQVSGNRFKITHQSDPVEFLGWLLNRLHADLTSAPAVAAGKPAKRKRVGPGGESIISR 388
Query: 107 TFLGSMKVKTRKI-----------PPVELEEKVRQRLLLTEEYKETET------------ 143
F G+++V+++ + + E + Q L ++ ++E
Sbjct: 389 CFQGTVQVESQPLTRPAEDAYPTSTSAQAERILDQPLTTSDGQIDSEGRAQFDPSLTLNK 448
Query: 144 -ESPFLYLTCDLPPPP--LFKD--EVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLK 198
++PF L DLP PP L +D E ++PQV + +L K++ +S E L
Sbjct: 449 RDTPFFLLAMDLPTPPPVLAQDDSETGSRLVPQVTIGQVLAKYDGKSLHE----SHGKLT 504
Query: 199 RFEITSLPPYLILYVKRFTKNTFFV-EKNPTIVNFPVKNVDFGD------ILTPEVKAKY 251
R+ + LPPYLI++ +RFTKN+ E+NPT+VNFP+K++D G LT K
Sbjct: 505 RYHLRRLPPYLIIHFRRFTKNSLGQEERNPTLVNFPIKSLDVGKHVPLLPNLTSNGAKKD 564
Query: 252 ESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYR--------VHLYHK--GIGKWYEIQ 301
ES + + +YDLVAN+V+D P GT R VH K KW+ IQ
Sbjct: 565 ESD-------RKLNEVYDLVANVVYDAVP--GTVRQGASWKTQVHTNSKPPKEEKWFSIQ 615
Query: 302 DLHVTDILPQMITLTEAYIQIYELRTTP 329
DL V ++ QMI L E+Y+QI++ R++P
Sbjct: 616 DLLVEEVNKQMIFLGESYLQIWQKRSSP 643
>gi|358366048|dbj|GAA82669.1| snRNP assembly factor [Aspergillus kawachii IFO 4308]
Length = 616
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 134/380 (35%), Positives = 196/380 (51%), Gaps = 73/380 (19%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R+YFL + P + L RF L+RKLWNP+ F+SHVSPHE+LQ
Sbjct: 248 LAHVFPIRNYFL-------LHEFPQPGTPQLALRFSTLVRKLWNPKAFRSHVSPHELLQE 300
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTRK 118
+ L S K+F T+QSDP+DF+SWFLN LH +L G+KK +S+V F G ++++++
Sbjct: 301 IALRSSKRFTLTQQSDPVDFMSWFLNNLHLSLGGSKKPSKTPTSVVQAAFQGHLRIESQA 360
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ TE +PFL LT DLPP PLF+ E+IIPQV L T+L
Sbjct: 361 I--TAHSDTQNARLVFTESGSINSQTTPFLILTLDLPPTPLFQSANRESIIPQVPLTTLL 418
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E ++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +++
Sbjct: 419 NKYNGITASEKLAHR---VRHRLLHPLPPYLLFHIKRFSKNRFVSERNPTIVTFPSPRSL 475
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD-------------------- 277
D ++P V+ E + E +YDLVANI+ D
Sbjct: 476 D----MSPYVEPNPE------IWPPGEPILYDLVANIILDPTVAAPGAHEEAAADKGVNA 525
Query: 278 --GEPSNG--------TYRVHLYHKGIG-----------------KWYEIQDLHVTDILP 310
G+ S+G ++ V L+ K + +W EIQDL V
Sbjct: 526 ASGKASSGAGAGSEKVSWLVQLHDKAMSAENSRLQKEHAGEQRGPEWLEIQDLFVKRAET 585
Query: 311 QMITLTEAYIQIYELRTTPS 330
+ + E Y+ ++E R P
Sbjct: 586 ETLFTKEGYLMVWERRKVPG 605
>gi|71004356|ref|XP_756844.1| hypothetical protein UM00697.1 [Ustilago maydis 521]
gi|46095544|gb|EAK80777.1| hypothetical protein UM00697.1 [Ustilago maydis 521]
Length = 633
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 196/373 (52%), Gaps = 63/373 (16%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV +RDYFL V+ G+ S LV+RFG L+RK+WNPR FK+ VSPHE LQ
Sbjct: 277 ALVHVPMIRDYFLLG---KEVEGEVGEKS-ELVKRFGSLVRKVWNPRAFKAQVSPHEFLQ 332
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRAL-----NGTKKK------DSSIVYKTFL 109
V + S +F+ T QSDP++FL W LN LH L NG K+K S++ + F
Sbjct: 333 QVAVVSGNRFRITHQSDPVEFLGWLLNCLHADLTRGGKNGGKRKRGVGAGGESVISRCFQ 392
Query: 110 GSMKVKTRKIPPVE--------------LEEKVRQRLLLTEEYKET------------ET 143
G ++V+++ + + E +++ + E+ E+
Sbjct: 393 GVVQVESQPLSRSDETEAASSASTVAAEAEGMLKEATISGEQVDESGRARFDPSVPVDRR 452
Query: 144 ESPFLYLTCDLPPP-PLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEI 202
+SPF L DLPPP P+ E EN++PQ+ + +L++++ +S L R+ +
Sbjct: 453 DSPFFLLAMDLPPPAPVISSEEGENLVPQITIGQVLSRYDGQSLHASNAK----LTRYTL 508
Query: 203 TSLPPYLILYVKRFTKNTFFV-EKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKA 261
LPPYLI++ +RFTKN+ E+NPT+VNFP+K +D +T V A T L
Sbjct: 509 RRLPPYLIIHFRRFTKNSLGQEERNPTLVNFPIKGLD----VTKHV-ALCRDTQQQLSSP 563
Query: 262 KYESTM---YDLVANIVHDGEPSNGTYRVHLYHK-----GIGKWYEIQDLHVTDILPQMI 313
+S + YDLVAN V + G+ R L + KW+ IQDL V ++ QMI
Sbjct: 564 DADSKLSEIYDLVANCV---KAPAGSVRYTLRAQRRRRSKQQKWFAIQDLLVEEVNRQMI 620
Query: 314 TLTEAYIQIYELR 326
L E+Y+QI++ R
Sbjct: 621 FLGESYLQIWQKR 633
>gi|2832685|emb|CAA16785.1| putative protein [Arabidopsis thaliana]
gi|7269081|emb|CAB79190.1| putative protein [Arabidopsis thaliana]
Length = 477
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 167/276 (60%), Gaps = 35/276 (12%)
Query: 53 VSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSM 112
VSPHE LQAV+ S+K+F+ +QSDP++F+SW LNTLH L T K SSI++K F G +
Sbjct: 229 VSPHEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLR-TSKDASSIIHKCFQGEL 287
Query: 113 KVKTRKIPPVELEEKVRQRLLLTEEYKETETES----PFLYLTCDLPPPPLFKDEVLENI 168
+V +EY+ E + PFL L DLPPPPLFKD + +NI
Sbjct: 288 EV--------------------VKEYQGNENKEISRMPFLMLGLDLPPPPLFKDVMEKNI 327
Query: 169 IPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPT 228
IPQV L+ +L KF+ E+ E K + R+ + P YL+ ++ RF KN FF EKNPT
Sbjct: 328 IPQVALFDLLKKFDGETVTEVVRPKLARM-RYRVIKSPRYLMFHMVRFKKNNFFKEKNPT 386
Query: 229 IVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
+VNFPVK+++ D + +A + + Y+L+ANIVHDG+P +G +RV
Sbjct: 387 LVNFPVKDMELRDYIPSLPRAPEGENV---------CSKYNLIANIVHDGKPEDGYFRVF 437
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+ K WYE+QDLHV + LPQM+ L+EAY+QIYE
Sbjct: 438 VQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYE 473
>gi|317038065|ref|XP_001401556.2| snRNP assembly factor [Aspergillus niger CBS 513.88]
Length = 616
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/380 (35%), Positives = 196/380 (51%), Gaps = 73/380 (19%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R+YFL + P + L RF L+RKLWNP+ F+SHVSPHE+LQ
Sbjct: 248 LAHVFPIRNYFL-------LHEFPQPGTPQLALRFSTLVRKLWNPKAFRSHVSPHELLQE 300
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTRK 118
+ L S K+F T+QSDP++F+SWFLN LH +L G+KK +S+V F G ++++++
Sbjct: 301 IALRSSKRFTLTQQSDPVEFMSWFLNNLHLSLGGSKKPSKTPTSVVQAAFQGHLRIESQA 360
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ TE +PFL LT DLPP PLF+ E+IIPQV L T+L
Sbjct: 361 I--TAHSDTQNARLVFTESGSINSQTTPFLILTLDLPPTPLFQSANRESIIPQVPLTTLL 418
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E ++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +++
Sbjct: 419 NKYNGITASEKLAHR---VRHRLLHPLPPYLLFHIKRFSKNRFVSERNPTIVTFPSPRSL 475
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD-------------------- 277
D ++P V+ E + E +YDLVANI+ D
Sbjct: 476 D----MSPYVEPNPE------IWPPGEPILYDLVANIILDPTVAAPGAHEEAAADKGVNA 525
Query: 278 --GEPSNG--------TYRVHLYHKGIG-----------------KWYEIQDLHVTDILP 310
G+ S+G ++ V L+ K + +W EIQDL V
Sbjct: 526 ASGKASSGAGAGSEKVSWLVQLHDKAMSAENGRLQKEHAGEQRGPEWLEIQDLFVKRAES 585
Query: 311 QMITLTEAYIQIYELRTTPS 330
+ + E Y+ ++E R P
Sbjct: 586 ETLFTKEGYLMVWERRKVPG 605
>gi|350632101|gb|EHA20469.1| hypothetical protein ASPNIDRAFT_44214 [Aspergillus niger ATCC 1015]
Length = 616
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/380 (35%), Positives = 196/380 (51%), Gaps = 73/380 (19%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R+YFL + P + L RF L+RKLWNP+ F+SHVSPHE+LQ
Sbjct: 248 LAHVFPIRNYFL-------LHEFPQPGTPQLALRFSTLVRKLWNPKAFRSHVSPHELLQE 300
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTRK 118
+ L S K+F T+QSDP++F+SWFLN LH +L G+KK +S+V F G ++++++
Sbjct: 301 IALRSSKRFTLTQQSDPVEFMSWFLNNLHLSLGGSKKPSKAPTSVVQAAFQGHLRIESQA 360
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ TE +PFL LT DLPP PLF+ E+IIPQV L T+L
Sbjct: 361 I--TAHSDTQNARLVFTESGSINSQTTPFLILTLDLPPTPLFQSANRESIIPQVPLTTLL 418
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E ++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +++
Sbjct: 419 NKYNGITASEKLAHR---VRHRLLHPLPPYLLFHIKRFSKNRFVSERNPTIVTFPSPRSL 475
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD-------------------- 277
D ++P V+ E + E +YDLVANI+ D
Sbjct: 476 D----MSPYVEPNPE------IWPPGEPILYDLVANIILDPTVAAPGAHEEAAADKGVNA 525
Query: 278 --GEPSNG--------TYRVHLYHKGIG-----------------KWYEIQDLHVTDILP 310
G+ S+G ++ V L+ K + +W EIQDL V
Sbjct: 526 ASGKASSGAGAGSEKVSWLVQLHDKAMSAENGRLQKEHAGEQRGPEWLEIQDLFVKRAES 585
Query: 311 QMITLTEAYIQIYELRTTPS 330
+ + E Y+ ++E R P
Sbjct: 586 ETLFTKEGYLMVWERRKVPG 605
>gi|315045442|ref|XP_003172096.1| U4/U6.U5 tri-snRNP-associated protein 2 [Arthroderma gypseum CBS
118893]
gi|311342482|gb|EFR01685.1| U4/U6.U5 tri-snRNP-associated protein 2 [Arthroderma gypseum CBS
118893]
Length = 602
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 193/387 (49%), Gaps = 77/387 (19%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL + P S+ L RFG L+RKLWNPR FK+HVSPHE+LQ
Sbjct: 237 LAHVRPIRNFFL-------LHDFPALSTPQLPLRFGMLVRKLWNPRAFKAHVSPHELLQE 289
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK---KDSSIVYKTFLGSMKVKTRK 118
V + S K+F T+QSDPI+FLSWFLN LH L G+KK K +S++ F G ++++++
Sbjct: 290 VAIRSSKRFTLTKQSDPIEFLSWFLNNLHLTLGGSKKPSSKPTSVIQSAFHGKLRIESQA 349
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ +E T +PFL LT DLPP PLF+ ++IIPQV L T+L
Sbjct: 350 I--TARSDSANARLVFSESSTTTSQVNPFLMLTLDLPPTPLFQSSNKDSIIPQVPLTTLL 407
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E ++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +
Sbjct: 408 NKYNGITASEKLAHR---VRHRLLHPLPPYLLFHIKRFSKNKFVAERNPTIVTFPSPHGL 464
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD------GEPSNG-------- 283
D + P+ + E +YDLVAN++ D G P N
Sbjct: 465 DMSPYVEPDPS----------IWPPGEPIIYDLVANVILDAAVNVPGGPENAANSAETAK 514
Query: 284 -------------------------TYRVHLYHKGIG------------KWYEIQDLHVT 306
++ + L+ K + +W E QDL V
Sbjct: 515 DLTETGPSASSTSTTPGAAAGNQKVSWLIQLHDKAMATENSQQQQQKGPEWLEAQDLWVK 574
Query: 307 DILPQMITLTEAYIQIYELRTTPSPTA 333
+ + E Y+ ++E R T P +
Sbjct: 575 RTESETLFTREGYLMVWERRKTKPPGS 601
>gi|258566686|ref|XP_002584087.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905533|gb|EEP79934.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 607
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 197/384 (51%), Gaps = 81/384 (21%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL +++ ++ PG L RFG L+RKLWNP+ FK HVSPHE+LQ
Sbjct: 236 LAHVRPIRNFFL--LHHFQI---PGTPQLPL--RFGTLVRKLWNPKAFKCHVSPHELLQE 288
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTRK 118
+ L S K+F T QSDP++FLSWFLN LH +L G+KK +S+++ F G ++++++
Sbjct: 289 IALRSSKRFTLTHQSDPVEFLSWFLNNLHLSLGGSKKPSPTPTSVIHSAFQGHLRIESQA 348
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ +E T + PFL LT DLPP PLF+ E+IIPQV L +L
Sbjct: 349 I--TARSDSANARLVFSESSTTTSQKMPFLILTLDLPPTPLFQSADKESIIPQVPLINLL 406
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E +++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP + +
Sbjct: 407 NKYNGVTAIEKLSHR---VRHRLLHPLPPYLLFHIKRFSKNKFVAERNPTIVTFPSPRGL 463
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD------GEP----------- 280
D + P V E +YDLVAN++ D G+P
Sbjct: 464 DMSPYVEPNPS----------VWPPGEPIIYDLVANVILDATVTAPGDPETRAPENNRGG 513
Query: 281 ----------------------SNGTYRVH----LYHKGIG------------KWYEIQD 302
S G++RV+ L+ K +G +W E QD
Sbjct: 514 LAEAAAAGAGGATLGVSTTPGASAGSHRVNWLIQLHDKAMGVENAKAQTQRGPEWLETQD 573
Query: 303 LHVTDILPQMITLTEAYIQIYELR 326
L V + + E Y+ ++E R
Sbjct: 574 LWVQRAESETLFTREGYLMVWERR 597
>gi|121706833|ref|XP_001271643.1| snRNP assembly factor, putative [Aspergillus clavatus NRRL 1]
gi|119399791|gb|EAW10217.1| snRNP assembly factor, putative [Aspergillus clavatus NRRL 1]
Length = 614
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 130/379 (34%), Positives = 191/379 (50%), Gaps = 72/379 (18%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R+YFL + P + L RF L+RKLWNP+ F+SHVSPHE+LQ
Sbjct: 247 LAHVFPVRNYFL-------LHEFPTPGTPQLALRFSTLVRKLWNPKAFRSHVSPHELLQE 299
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDS---SIVYKTFLGSMKVKTRK 118
+ L S K+F T+QSDP++FLSWFLN LH +L G+KK + S+++ F G ++++++
Sbjct: 300 IALRSSKRFTLTQQSDPVEFLSWFLNNLHLSLGGSKKPTATPTSVIHAAFQGHLRIESQA 359
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ TE ++PFL LT DLPP PLF+ E+IIPQV L T+L
Sbjct: 360 I--TAHSDTQNARLVFTESGTINSQKTPFLILTLDLPPTPLFQSANRESIIPQVPLTTLL 417
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E ++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +++
Sbjct: 418 NKYNGITASEKLAHR---VRHRLLHPLPPYLLFHIKRFSKNRFVSERNPTIVTFPSPRSL 474
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD------GEPSNGTYR----- 286
D + P + E +YDLVANI+ D G + +
Sbjct: 475 DMSPYVEPNPD----------IWPPGEPILYDLVANIILDPTVAAPGATEDAAEKGVNAA 524
Query: 287 ------------------VHLYHKGIG-----------------KWYEIQDLHVTDILPQ 311
V L+ K + +W EIQDL V +
Sbjct: 525 GGSSSAGAGAGSERVAWLVQLHDKAMAAENVRHQSQGAGEHQGPEWLEIQDLFVNKAESE 584
Query: 312 MITLTEAYIQIYELRTTPS 330
+ E Y+ ++E R TP
Sbjct: 585 TLFTREGYLMVWERRKTPG 603
>gi|326472703|gb|EGD96712.1| snRNP assembly factor [Trichophyton tonsurans CBS 112818]
Length = 604
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 190/379 (50%), Gaps = 76/379 (20%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL + P S+ L RFG L+RKLWNPR FK+HVSPHE+LQ
Sbjct: 240 LAHVRPIRNFFL-------LHDFPALSTPQLPLRFGVLVRKLWNPRAFKAHVSPHELLQE 292
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK---KDSSIVYKTFLGSMKVKTRK 118
V + S K+F T+QSDPI+FLSWFLN LH L G+KK K +S++ F G ++++++
Sbjct: 293 VAIRSSKRFTLTKQSDPIEFLSWFLNNLHLTLGGSKKPSSKPTSVIQSAFHGKLRIESQA 352
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ +E T +PFL LT DLPP PLF+ ++IIPQV L T+L
Sbjct: 353 I--TARSDSANARLVFSESSTTTSQVNPFLMLTLDLPPTPLFQSSNKDSIIPQVPLTTLL 410
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E ++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +
Sbjct: 411 NKYNGITASEKLAHR---VRHRLLHPLPPYLLFHIKRFSKNKFVAERNPTIVTFPSPHGL 467
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD------GEPSNG-------- 283
D + P+ V E +YDLVAN++ D G P N
Sbjct: 468 DMSPYVEPDPS----------VWPPGEPIIYDLVANVILDAAVNVPGGPENAANSAETAK 517
Query: 284 ------------------------TYRVHLYHKGIG------------KWYEIQDLHVTD 307
++ + L+ K + +W E QDL V
Sbjct: 518 DLTDTGPSAASTTTPGAAAGNHKVSWLIQLHDKAMATENSQQQQQKGPEWLEAQDLWVKR 577
Query: 308 ILPQMITLTEAYIQIYELR 326
+ + E Y+ ++E R
Sbjct: 578 TESETLFTREGYLMVWERR 596
>gi|378725539|gb|EHY51998.1| ubiquitin thiolesterase [Exophiala dermatitidis NIH/UT8656]
Length = 588
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 135/370 (36%), Positives = 195/370 (52%), Gaps = 57/370 (15%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV PLR++FL + P + L V RF L+RKLWNP+ FKSHVSPHE+LQ
Sbjct: 235 LAHVAPLRNFFL-------LHAFPHTAPQLPV-RFSTLVRKLWNPKAFKSHVSPHELLQE 286
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD-SSIVYKTFLGSMKVKTRKIP 120
+ L S K+F T+QSDP++FLSWFLN LH +L G+K K SSI+ K F G ++V++++I
Sbjct: 287 IALRSSKRFTLTQQSDPVEFLSWFLNNLHLSLGGSKTKPFSSIIQKAFQGKLRVESQEI- 345
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEV-LENIIPQVNLYTILT 179
+ RL E +P+L LT DLPP PLF+D V +NIIPQV L ++L
Sbjct: 346 -TAKSDITGDRLRFEESSTINTNITPYLILTLDLPPVPLFRDAVESKNIIPQVPLTSLLQ 404
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNVD 238
K+N + E ++++ ++ + LPPYL+ ++KRF+ N F E+NPTIV FP + +D
Sbjct: 405 KYNGLNALERQSHR---VRHRLLHPLPPYLLFHIKRFSVNKFVSERNPTIVTFPSPRGLD 461
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD--------GEPSNG------- 283
+ P V E Y++VANI+ D GE SN
Sbjct: 462 MSPYVEPN----------PAVHPPGEPIYYEMVANIILDTTSVSVGGGEDSNAADAANKA 511
Query: 284 --------TYRVHLYHKGIG--------KWYEIQDLHVTDILPQMITLTEAYIQIYELRT 327
++V L K + +W EIQDL V + + E+Y+ ++E +
Sbjct: 512 VGAEGQKVAWKVQLRDKAVAHAQRTDLPEWLEIQDLFVDRAEAETLFTRESYLMVWERKK 571
Query: 328 TPSPTAMSEG 337
TA +
Sbjct: 572 GKPNTASGQA 581
>gi|302662702|ref|XP_003023002.1| hypothetical protein TRV_02823 [Trichophyton verrucosum HKI 0517]
gi|291186978|gb|EFE42384.1| hypothetical protein TRV_02823 [Trichophyton verrucosum HKI 0517]
Length = 604
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/381 (34%), Positives = 190/381 (49%), Gaps = 76/381 (19%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL + P S+ L RFG L+RKLWNPR FK+HVSPHE+LQ
Sbjct: 240 LAHVRPIRNFFL-------LHDFPALSTPQLPLRFGVLVRKLWNPRAFKAHVSPHELLQE 292
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK---KDSSIVYKTFLGSMKVKTRK 118
V + S K+F T+QSDPI+FLSWFLN LH L G+KK K +S++ F G ++++++
Sbjct: 293 VAIRSSKRFTLTKQSDPIEFLSWFLNNLHLTLGGSKKPSSKPTSVIQSAFHGKLRIESQA 352
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ +E T + FL LT DLPP PLF+ ++IIPQV L T+L
Sbjct: 353 I--TARSDSANARLVFSESSTTTSQVNRFLMLTLDLPPTPLFQSSNKDSIIPQVPLTTLL 410
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E ++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +
Sbjct: 411 NKYNGITASEKLAHR---VRHRLLHPLPPYLLFHIKRFSKNKFVAERNPTIVTFPSPHGL 467
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD------GEPSNG-------- 283
D + P+ V E +YDLVAN++ D G P N
Sbjct: 468 DMSPYVEPDPS----------VWPPGEPIIYDLVANVILDAAVNVPGGPENAANSAETAK 517
Query: 284 ------------------------TYRVHLYHKGIG------------KWYEIQDLHVTD 307
++ + LY K + +W E QDL V
Sbjct: 518 DLTETGPSAASTTTPGAAAGNHKVSWLIQLYDKAMATENAQQQQQKGPEWLEAQDLWVKR 577
Query: 308 ILPQMITLTEAYIQIYELRTT 328
+ + E Y+ ++E R T
Sbjct: 578 TESETLFTREGYLMVWERRKT 598
>gi|119501032|ref|XP_001267273.1| snRNP assembly factor, putative [Neosartorya fischeri NRRL 181]
gi|119415438|gb|EAW25376.1| snRNP assembly factor, putative [Neosartorya fischeri NRRL 181]
Length = 614
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/379 (35%), Positives = 193/379 (50%), Gaps = 72/379 (18%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R+YFL + + P + L RF L+RKLWNP+ F+SHVSPHE+LQ
Sbjct: 247 LAHVFPIRNYFL-------LHQFPVPGTPELALRFSTLVRKLWNPKAFRSHVSPHELLQE 299
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDS---SIVYKTFLGSMKVKTRK 118
+ L S K+F T+QSDP++FLSWFLN LH +L G+KK S S++ F G ++++++
Sbjct: 300 IALRSSKRFTLTQQSDPVEFLSWFLNNLHLSLGGSKKPSSTPTSVIQAAFQGHLRIESQA 359
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ TE +PFL LT DLPP PLF+ E+IIP V L T+L
Sbjct: 360 I--TAHSDTQNARLVFTESGTINSQTTPFLILTLDLPPTPLFQSANRESIIPHVPLTTLL 417
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E ++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +++
Sbjct: 418 NKYNGITASEKLAHR---VRHRLLHPLPPYLLFHIKRFSKNRFVSERNPTIVTFPSPRSL 474
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD-------------------- 277
D ++P V+ E + E +YDLVANI+ D
Sbjct: 475 D----MSPYVEPNPE------IWPPGEPILYDLVANIILDPTVAAPGTTEDAAEKGLTAA 524
Query: 278 -GEPSNG--------TYRVHLYHKGIG-----------------KWYEIQDLHVTDILPQ 311
G S G + V L+ K + +W EIQDL V +
Sbjct: 525 GGTSSAGAGAGSERVAWLVQLHDKAMAEENRRHQSQGAGEQQGPEWLEIQDLFVKKAESE 584
Query: 312 MITLTEAYIQIYELRTTPS 330
+ E Y+ ++E R P
Sbjct: 585 TLFTREGYLMVWERRKIPG 603
>gi|326482051|gb|EGE06061.1| snRNP assembly factor [Trichophyton equinum CBS 127.97]
Length = 604
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 189/379 (49%), Gaps = 76/379 (20%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL + P S+ L RFG L+RKLWNPR FK+HVSPHE+LQ
Sbjct: 240 LAHVRPIRNFFL-------LHDFPALSTPQLPLRFGVLVRKLWNPRAFKAHVSPHELLQE 292
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK---KDSSIVYKTFLGSMKVKTRK 118
V + S K+F T+QSDPI+FLSWFLN LH L G+KK K +S++ F G ++++++
Sbjct: 293 VAIRSSKRFTLTKQSDPIEFLSWFLNNLHLTLGGSKKPSSKPTSVIQSAFHGKLRIESQA 352
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ +E T +PFL LT DLPP PLF+ ++IIPQV L T+L
Sbjct: 353 I--TARSDSANARLVFSESSTTTSQVNPFLMLTLDLPPTPLFQSSNKDSIIPQVPLTTLL 410
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E ++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +
Sbjct: 411 NKYNGITASEKLAHR---VRHRLLHPLPPYLLFHIKRFSKNKFVAERNPTIVTFPSPHGL 467
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD------GEPSNG-------- 283
D + P+ V E YDLVAN++ D G P N
Sbjct: 468 DMSPYVEPDPS----------VWPPGEPITYDLVANVILDAAVNVPGGPENAANSAETAK 517
Query: 284 ------------------------TYRVHLYHKGIG------------KWYEIQDLHVTD 307
++ + L+ K + +W E QDL V
Sbjct: 518 DLTDTGPSAASTTTPGAAAGNHKVSWLIQLHDKAMATENSQQQQQKGPEWLEAQDLWVKR 577
Query: 308 ILPQMITLTEAYIQIYELR 326
+ + E Y+ ++E R
Sbjct: 578 TESETLFTREGYLMVWERR 596
>gi|327304351|ref|XP_003236867.1| snRNP assembly factor [Trichophyton rubrum CBS 118892]
gi|326459865|gb|EGD85318.1| snRNP assembly factor [Trichophyton rubrum CBS 118892]
Length = 605
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 164/281 (58%), Gaps = 26/281 (9%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL + P S+ L RFG L+RKLWNPR FK+HVSPHE+LQ
Sbjct: 241 LAHVRPIRNFFL-------LHDFPALSTPQLPLRFGVLVRKLWNPRAFKAHVSPHELLQE 293
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK---KDSSIVYKTFLGSMKVKTRK 118
V + S K+F T+QSDPI+FLSWFLN LH L G+KK K +S++ F G ++++++
Sbjct: 294 VAIRSSKRFTLTKQSDPIEFLSWFLNNLHLTLGGSKKPSSKPTSVIQSAFHGKLRIESQA 353
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ +E T +PFL LT DLPP PLF+ ++IIPQV L T+L
Sbjct: 354 I--TARSDSANARLVFSESSTTTSQVNPFLMLTLDLPPTPLFQSSNKDSIIPQVALTTLL 411
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E ++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +
Sbjct: 412 NKYNGITASEKLAHR---VRHRLLHPLPPYLLFHIKRFSKNKFVAERNPTIVTFPSPHGL 468
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG 278
D + P+ V E +YDLVAN++ D
Sbjct: 469 DMSPYVEPDPS----------VWPPGEPIIYDLVANVILDA 499
>gi|242808710|ref|XP_002485221.1| snRNP assembly factor, putative [Talaromyces stipitatus ATCC 10500]
gi|218715846|gb|EED15268.1| snRNP assembly factor, putative [Talaromyces stipitatus ATCC 10500]
Length = 616
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 171/281 (60%), Gaps = 26/281 (9%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HVTP+R++FL + N+ P S L RF L+RKLWNP+ FKSHVSPHE+LQ
Sbjct: 236 LAHVTPIRNFFLLQ-NF------PVPGSPQLSVRFSTLVRKLWNPKAFKSHVSPHELLQE 288
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTRK 118
+ L S K+F T QSDP++FLSWFLN LH +L G+KK +S++ + F G ++++++
Sbjct: 289 IALRSSKRFTLTHQSDPVEFLSWFLNNLHLSLGGSKKPSKTPTSVIQQAFQGHLRIESQA 348
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ TE + SPFL LT DLPP PLF+ E+IIPQV L T+L
Sbjct: 349 I--TAHSDTTNSRLVFTESSQTNTQTSPFLILTLDLPPTPLFQSANRESIIPQVPLTTLL 406
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E +++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +++
Sbjct: 407 NKYNGITASEKLSHR---VRHRLLHPLPPYLLFHIKRFSKNKFVSERNPTIVTFPSPRSL 463
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG 278
D ++P V+ E + E +YDLV+NI+ D
Sbjct: 464 D----MSPYVEPNPE------LWPPGEPIIYDLVSNIILDA 494
>gi|294940392|ref|XP_002782775.1| pre-mRNA-splicing factor SAD1, putative [Perkinsus marinus ATCC
50983]
gi|239894725|gb|EER14570.1| pre-mRNA-splicing factor SAD1, putative [Perkinsus marinus ATCC
50983]
Length = 505
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 175/339 (51%), Gaps = 49/339 (14%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L V PLR+ L + K+ S + + EL RK +N +NFK VSPHE LQ
Sbjct: 177 LQQVVPLRNSLLTK------KQDLDASRTDITEALAELFRKTYNAKNFKGVVSPHEFLQV 230
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTL--HRALNGTKKKDSSIVYKTFLGSMKVKTRKI 119
V + S+K F FT Q DP +FL+W LN L H+ +N K F G + VKT +
Sbjct: 231 VSIKSKKHF-FTSQRDPAEFLTWLLNHLRPHKTIN-----------KIFKGEILVKTCRN 278
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+ V + ET S FL LT DLP PLFKD + IPQV + ++L
Sbjct: 279 LDSQTAGDVWE-----------ETTSEFLTLTLDLPDAPLFKDT--QEFIPQVPMISLLD 325
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
KFN E+ E +++ L+++ + LPPYLI KRF KN F VEKNPT+V FP+K +D
Sbjct: 326 KFNGETIVEDLVHRQ--LRKYTLKRLPPYLIFVTKRFKKNNFTVEKNPTLVRFPLKGLDM 383
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP--SNGTYRVHLYHKGIGKW 297
D + P + +++ E T YDLV + H G+P G Y+ ++ H +W
Sbjct: 384 KDWVHP--------SWHNI----NEHTKYDLVGLVSHSGQPEAGMGVYKAYVLHSRTNQW 431
Query: 298 YEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTAMSE 336
E DL+V ILPQ + L E YIQ+Y+ S ++
Sbjct: 432 QETHDLNVAPILPQSVALMETYIQVYQREDVQSDGTFTD 470
>gi|212537605|ref|XP_002148958.1| snRNP assembly factor, putative [Talaromyces marneffei ATCC 18224]
gi|210068700|gb|EEA22791.1| snRNP assembly factor, putative [Talaromyces marneffei ATCC 18224]
Length = 612
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/396 (33%), Positives = 199/396 (50%), Gaps = 85/396 (21%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HVTP+R++FL + N+ P S L RF L+RKLWNP+ FKSHVSPHE+LQ
Sbjct: 237 LAHVTPIRNFFLLQ-NF------PVPGSPQLSVRFSTLVRKLWNPKAFKSHVSPHELLQE 289
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTRK 118
+ L S K+F T QSDP++FLSWFLN LH L G+KK +S++ + F G ++++++
Sbjct: 290 IALRSSKRFTLTHQSDPVEFLSWFLNNLHLTLGGSKKPSKAPTSVIQQAFQGHLRIESQA 349
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ E + SPFL LT DLPP PLF+ E+IIPQ+ L T+L
Sbjct: 350 I--TAHSDTTNSRLVFAESSETNTQTSPFLILTLDLPPTPLFQSANRESIIPQIPLTTLL 407
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E +++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +++
Sbjct: 408 NKYNGITASEKLSHR---VRHRLLHPLPPYLLFHIKRFSKNKFVSERNPTIVTFPSPRSL 464
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGE---PSNG----------- 283
D + P + + E +YDLV+NI+ D P G
Sbjct: 465 DMSPYVEPNPQ----------LWPPGEPIIYDLVSNIILDANAPTPGAGEDTSAAADKGL 514
Query: 284 --------------------------TYRVHLYHKGIG----------------KWYEIQ 301
++ V L+ K + +W EIQ
Sbjct: 515 AAAGGAGNKNASSAATTGAGAGSEKVSWLVQLHDKAMAAENAKHQQQQAQQRGPEWLEIQ 574
Query: 302 DLHVTDILPQMITLTEAYIQIYELRTTPSPTAMSEG 337
DL+V + + E+Y+ ++E R T + M +G
Sbjct: 575 DLYVQRTESETLFTRESYLMVWERRKT---SGMKKG 607
>gi|70994592|ref|XP_752073.1| snRNP assembly factor [Aspergillus fumigatus Af293]
gi|66849707|gb|EAL90035.1| snRNP assembly factor, putative [Aspergillus fumigatus Af293]
gi|159125012|gb|EDP50129.1| snRNP assembly factor, putative [Aspergillus fumigatus A1163]
Length = 614
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/379 (35%), Positives = 192/379 (50%), Gaps = 72/379 (18%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R+YFL + + P + L RF L+RKLWNP+ F+SHVSPHE+LQ
Sbjct: 247 LAHVLPIRNYFL-------LHQFPVPGTPELALRFSTLVRKLWNPKAFRSHVSPHELLQE 299
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDS---SIVYKTFLGSMKVKTRK 118
+ L S K+F T+QSDP++FLSWFLN LH +L G+KK S S++ F G ++++++
Sbjct: 300 IALRSSKRFTLTQQSDPVEFLSWFLNNLHLSLGGSKKPSSTPTSVIQAAFQGHLRIESQA 359
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ TE PFL LT DLPP PLF+ E+IIP V L T+L
Sbjct: 360 I--TAHSDTQNARLVFTESGTINSQTIPFLILTLDLPPTPLFQSANRESIIPHVPLTTLL 417
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E ++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +++
Sbjct: 418 NKYNGITASEKLAHR---VRHRLLHPLPPYLLFHIKRFSKNRFVSERNPTIVTFPSPRSL 474
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD-------------------- 277
D ++P V+ E + E +YDLVANI+ D
Sbjct: 475 D----MSPYVEPNPE------IWPPGEPILYDLVANIILDPTVAAPGTTEDAAEKGLTAA 524
Query: 278 -GEPSNG--------TYRVHLYHKGIG-----------------KWYEIQDLHVTDILPQ 311
G S G + V L+ K + +W EIQDL V +
Sbjct: 525 GGTSSAGAGAGSERVAWLVQLHDKAMAEENRRHQSQGAGEQQGPEWLEIQDLFVKKAESE 584
Query: 312 MITLTEAYIQIYELRTTPS 330
+ E Y+ ++E R P
Sbjct: 585 TLFTREGYLMVWERRKIPG 603
>gi|225680871|gb|EEH19155.1| U4/U6.U5 tri-snRNP-associated protein [Paracoccidioides
brasiliensis Pb03]
Length = 615
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 166/281 (59%), Gaps = 26/281 (9%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL + R P + L RFG L+RKLWNPR FKSHVSPHE+LQ
Sbjct: 244 LAHVRPIRNFFL-------LHRFPTPGTPQLPLRFGILVRKLWNPRAFKSHVSPHELLQE 296
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTRK 118
V L S K+F T+QSDP++FLSWFLN LH +L G+K+ +S+++ F G ++++++
Sbjct: 297 VALRSSKRFTLTQQSDPVEFLSWFLNNLHLSLGGSKRPSPTPTSVIHTAFQGHLRIESQA 356
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ +E T +PFL LT DLPP PLF+ E++IPQV L T+L
Sbjct: 357 I--TARSDAANARLVFSESSSTTSQTTPFLILTLDLPPTPLFQSTNAESVIPQVPLTTLL 414
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N E +++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +++
Sbjct: 415 NKYNGLIASEKLSHR---VRHRLLHPLPPYLLFHIKRFSKNKFVSERNPTIVTFPSPRSL 471
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG 278
D + P + A E YDLVAN++ D
Sbjct: 472 DMSPYVEPNTS----------ICAPGEPIWYDLVANVILDA 502
>gi|226292573|gb|EEH47993.1| U4/U6.U5 tri-snRNP-associated protein [Paracoccidioides
brasiliensis Pb18]
Length = 615
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 166/281 (59%), Gaps = 26/281 (9%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL + R P + L RFG L+RKLWNPR FKSHVSPHE+LQ
Sbjct: 244 LAHVRPIRNFFL-------LHRFPTPGTPQLPLRFGILVRKLWNPRAFKSHVSPHELLQE 296
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTRK 118
V L S K+F T+QSDP++FLSWFLN LH +L G+K+ +S+++ F G ++++++
Sbjct: 297 VALRSSKRFTLTQQSDPVEFLSWFLNNLHLSLGGSKRPSPTPTSVIHTAFQGHLRIESQA 356
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ +E T +PFL LT DLPP PLF+ E++IPQV L T+L
Sbjct: 357 I--TARSDAANARLVFSESSSTTSQTTPFLILTLDLPPTPLFQSTNAESVIPQVPLTTLL 414
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N E +++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +++
Sbjct: 415 NKYNGLIASEKLSHR---VRHRLLHPLPPYLLFHIKRFSKNKFVSERNPTIVTFPSPRSL 471
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG 278
D + P + A E YDLVAN++ D
Sbjct: 472 DMSPYVEPNTS----------ICAPGEPIWYDLVANVILDA 502
>gi|115398075|ref|XP_001214629.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192820|gb|EAU34520.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 626
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 185/370 (50%), Gaps = 53/370 (14%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R+YFL + P + L RF L+RKLWNP+ F+SHVSPHE+LQ
Sbjct: 259 LAHVYPIRNYFL-------LHEFPTPGTPQLALRFSTLVRKLWNPKAFRSHVSPHELLQE 311
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTRK 118
+ L S K+F T+QSDP++F+SWFLN LH +L G+KK +S++ F G ++++++
Sbjct: 312 IALRSSKRFTLTQQSDPVEFMSWFLNNLHLSLGGSKKPSKTPTSVIQAAFQGHLRIESQA 371
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ TE +P+L LT DLPP PLF+ E+IIPQV L T+L
Sbjct: 372 I--TAHSDTQNARLVFTESGTINSQVTPYLILTLDLPPTPLFQSANRESIIPQVPLTTLL 429
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFP-VKNV 237
K+N + E ++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP ++
Sbjct: 430 NKYNGITASEKLAHR---VRHRLLHPLPPYLLFHIKRFSKNRFVSERNPTIVTFPSTHSL 486
Query: 238 DFGDIL--TPEVKAKYESTMYDLVK-----------AKYESTMYDLVANI---------- 274
D + P+V E YDLV E D N
Sbjct: 487 DMSQYVEPNPDVWPPSEPIYYDLVANIILDPMVTAPGATEDAAADKGVNAAGAAPSSGAG 546
Query: 275 -----------VHDGEPSNGTYRVHLYHKGIGK---WYEIQDLHVTDILPQMITLTEAYI 320
+HD + R+ H G + W EIQDL V + + E Y+
Sbjct: 547 AGSEKVAWHVQLHDKAMAAENARLQREHAGEQRGPEWLEIQDLFVKKAESETLFTREGYL 606
Query: 321 QIYELRTTPS 330
++E R P
Sbjct: 607 MVWERRKVPG 616
>gi|83769188|dbj|BAE59325.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 599
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/380 (34%), Positives = 184/380 (48%), Gaps = 73/380 (19%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R+YFL + P + L RF L+RKLWNP+ F+SHVSPHE+LQ
Sbjct: 231 LAHVFPIRNYFL-------LHEFPTPGTPQLALRFSTLVRKLWNPKAFRSHVSPHELLQE 283
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTRK 118
+ L S K+F T+QSDP++FLSWFLN LH +L G+KK +S+V F G ++++++
Sbjct: 284 IALRSSKRFTLTQQSDPVEFLSWFLNNLHLSLGGSKKPSKTPTSVVQAAFQGHLRIESQA 343
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ TE +PFL LT DLPP PLF+ E+IIP V L T+L
Sbjct: 344 I--TAHSDTQNARLVFTESGDIKSQTTPFLILTLDLPPTPLFQSANRESIIPHVPLTTLL 401
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E ++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +++
Sbjct: 402 NKYNGITASEKLAHR---VRHRLLHPLPPYLLFHIKRFSKNRFVSERNPTIVTFPSPRSL 458
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIV---------------------- 275
D + P + E +YDLVANI+
Sbjct: 459 DMSPYVEPNPD----------IWPPGEPILYDLVANIILDPTVAVPGATDEAAADKGVNA 508
Query: 276 ----------------------HDGEPSNGTYRVHLYHKGIGK---WYEIQDLHVTDILP 310
HD S R H G + W EIQDL V
Sbjct: 509 ASGASSSGAGAGSEKVSWMVQLHDKAMSAENNRQHSERAGEQQGPEWLEIQDLFVKKAET 568
Query: 311 QMITLTEAYIQIYELRTTPS 330
+ + E Y+ ++E R P
Sbjct: 569 ETLFTREGYLMVWERRKVPG 588
>gi|391869251|gb|EIT78453.1| spindle pole body protein - Sad1p [Aspergillus oryzae 3.042]
Length = 616
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/380 (34%), Positives = 184/380 (48%), Gaps = 73/380 (19%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R+YFL + P + L RF L+RKLWNP+ F+SHVSPHE+LQ
Sbjct: 248 LAHVFPIRNYFL-------LHEFPTPGTPQLALRFSTLVRKLWNPKAFRSHVSPHELLQE 300
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTRK 118
+ L S K+F T+QSDP++FLSWFLN LH +L G+KK +S+V F G ++++++
Sbjct: 301 IALRSSKRFTLTQQSDPVEFLSWFLNNLHLSLGGSKKPSKTPTSVVQAAFQGHLRIESQA 360
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ TE +PFL LT DLPP PLF+ E+IIP V L T+L
Sbjct: 361 I--TAHSDTQNARLVFTESGDIKSQTTPFLILTLDLPPTPLFQSANRESIIPHVPLTTLL 418
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E ++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +++
Sbjct: 419 NKYNGITASEKLAHR---VRHRLLHPLPPYLLFHIKRFSKNRFVSERNPTIVTFPSPRSL 475
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIV---------------------- 275
D + P + E +YDLVANI+
Sbjct: 476 DMSPYVEPNPD----------IWPPGEPILYDLVANIILDPTVAVPGATDEAAADKGVNA 525
Query: 276 ----------------------HDGEPSNGTYRVHLYHKGIGK---WYEIQDLHVTDILP 310
HD S R H G + W EIQDL V
Sbjct: 526 ASGASSSGAGAGSEKVSWMVQLHDKAMSAENNRQHSERAGEQQGPEWLEIQDLFVKKAET 585
Query: 311 QMITLTEAYIQIYELRTTPS 330
+ + E Y+ ++E R P
Sbjct: 586 ETLFTREGYLMVWERRKVPG 605
>gi|317146151|ref|XP_001821327.2| snRNP assembly factor [Aspergillus oryzae RIB40]
Length = 615
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/380 (34%), Positives = 184/380 (48%), Gaps = 73/380 (19%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R+YFL + P + L RF L+RKLWNP+ F+SHVSPHE+LQ
Sbjct: 247 LAHVFPIRNYFL-------LHEFPTPGTPQLALRFSTLVRKLWNPKAFRSHVSPHELLQE 299
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD---SSIVYKTFLGSMKVKTRK 118
+ L S K+F T+QSDP++FLSWFLN LH +L G+KK +S+V F G ++++++
Sbjct: 300 IALRSSKRFTLTQQSDPVEFLSWFLNNLHLSLGGSKKPSKTPTSVVQAAFQGHLRIESQA 359
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ TE +PFL LT DLPP PLF+ E+IIP V L T+L
Sbjct: 360 I--TAHSDTQNARLVFTESGDIKSQTTPFLILTLDLPPTPLFQSANRESIIPHVPLTTLL 417
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E ++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +++
Sbjct: 418 NKYNGITASEKLAHR---VRHRLLHPLPPYLLFHIKRFSKNRFVSERNPTIVTFPSPRSL 474
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIV---------------------- 275
D + P + E +YDLVANI+
Sbjct: 475 DMSPYVEPNPD----------IWPPGEPILYDLVANIILDPTVAVPGATDEAAADKGVNA 524
Query: 276 ----------------------HDGEPSNGTYRVHLYHKGIGK---WYEIQDLHVTDILP 310
HD S R H G + W EIQDL V
Sbjct: 525 ASGASSSGAGAGSEKVSWMVQLHDKAMSAENNRQHSERAGEQQGPEWLEIQDLFVKKAET 584
Query: 311 QMITLTEAYIQIYELRTTPS 330
+ + E Y+ ++E R P
Sbjct: 585 ETLFTREGYLMVWERRKVPG 604
>gi|328869581|gb|EGG17958.1| SAP DNA-binding domain-containing protein [Dictyostelium
fasciculatum]
Length = 524
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 171/315 (54%), Gaps = 48/315 (15%)
Query: 29 SFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNT 88
S LV F EL+R++WNPRNFKS VSPHE++QAV+ S+K+F +SDP+D L W LN+
Sbjct: 235 SSALVSTFSELLRRMWNPRNFKSQVSPHELIQAVIKASKKRFSIGVESDPLDLLQWLLNS 294
Query: 89 LHRALNGTKK-------------------KDSSIVYKTFLGSMKVKTRKIPPVELEEKVR 129
L+ + K S+I+ TF G ++V T+ + +++ +
Sbjct: 295 LNNDIIEQKNITGNSSSSSSSSSSSSSSSSSSTIITNTFQGMVEVTTKSLLKAPTQQEEQ 354
Query: 130 QRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEY 189
+ +E+K T+ PF L DLP +FK++ ++ IPQ+ LY +L K++ +E
Sbjct: 355 DNITNNQEFKTTKQIIPFFTLALDLPSRSIFKEDRDKSFIPQIPLYELLNKYDGSTE--- 411
Query: 190 KTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKA 249
K + +KRF + LP YL+ +KRF++N FF EK TIVNFP+KN++ D ++ + ++
Sbjct: 412 KIFPNGDIKRFRLLKLPSYLVFSIKRFSQNNFFTEKESTIVNFPLKNLEMKDFISRDNQS 471
Query: 250 KYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDIL 309
+ E Y+L+A I H+G+ + ++QDL V + +
Sbjct: 472 ---------INDDVEKYKYNLMAMIKHEGDIN-----------------QVQDLTVKETM 505
Query: 310 PQMITLTEAYIQIYE 324
+I ++EAYI +YE
Sbjct: 506 APLIAVSEAYILVYE 520
>gi|323508249|emb|CBQ68120.1| related to SAD1-protein required for assembly of U4 snRNA into the
U4/U6 particle [Sporisorium reilianum SRZ2]
Length = 626
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 188/371 (50%), Gaps = 59/371 (15%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV +RDYFL E +R LV+RFG L+RK+WNP+ FK+ VSPHE LQ
Sbjct: 271 ALVHVPAIRDYFLLEH-----EREGDVEKSELVKRFGALVRKMWNPKAFKAQVSPHEFLQ 325
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRAL---------NGTKKKDSSIVYKTFLGS 111
V S +F+ T QSDP++FL W LN LH L G S++ K+F G
Sbjct: 326 QVAAVSGNRFKITHQSDPVEFLGWLLNRLHADLAGGKGGKRKRGPGAAGESVISKSFQGV 385
Query: 112 MKVKTRKI--------PPVELEEKVRQRLLLTEEYKETETE----------------SPF 147
++V+++ + P + LL T++ E SPF
Sbjct: 386 VQVESQPLAARSEEAEPSASAVAAQAEPLLKTQQSNGQTDEQGRVRFDPALSVDKRDSPF 445
Query: 148 LYLTCDL-PPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLP 206
L L DL PPPP+ E +++PQV L +L K++ +S L R+ + LP
Sbjct: 446 LLLAMDLPPPPPVLGGEEGGHLVPQVTLGQVLAKYDGDSLHASNAK----LTRYALRRLP 501
Query: 207 PYLILYVKRFTKNTFFV-EKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYES 265
PYLI++ +RFTKN+ E+NPT+VNFP+K +D + A+ + +L S
Sbjct: 502 PYLIVHFRRFTKNSLGQEERNPTLVNFPIKGLDVAKHVPLLNNAQASTQDANL------S 555
Query: 266 TMYDLVANIVHDGEPS----NGTYRVHLY-----HKGIGKWYEIQDLHVTDILPQMITLT 316
+YDLVAN+V+D P +++ ++ K KW+ IQDL V + QMI L
Sbjct: 556 EVYDLVANVVYDAVPGTVRQGASWKCQVHTNVPTAKEGEKWFAIQDLLVEQVNRQMIFLG 615
Query: 317 EAYIQIYELRT 327
E+Y+QI+ RT
Sbjct: 616 ESYLQIWAKRT 626
>gi|2832679|emb|CAA16779.1| putative protein [Arabidopsis thaliana]
gi|7269075|emb|CAB79184.1| putative protein [Arabidopsis thaliana]
Length = 974
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/283 (43%), Positives = 168/283 (59%), Gaps = 38/283 (13%)
Query: 53 VSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSM 112
VSPHE LQAV+ S+K+F+ +QSDP++F+SW LNTLH L T K SSI++K F G +
Sbjct: 715 VSPHEFLQAVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLR-TSKDASSIIHKCFQGEL 773
Query: 113 KVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQV 172
+V V++ E KE S FL L DLPPPPLFKD + +NIIPQV
Sbjct: 774 EV-------------VKE--FQGNENKEISRMS-FLMLGLDLPPPPLFKDVMEKNIIPQV 817
Query: 173 NLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI--- 229
L+ +L KF+ E+ E K + R+ + P YL+ ++ RF KN FF EKNPT+
Sbjct: 818 ALFDLLKKFDGETVTEVVRPKLARM-RYRVIKSPRYLMFHMVRFKKNNFFKEKNPTLGSL 876
Query: 230 --------VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
VNFPVK+++ D Y ++ + + + Y+L+ANIVHDG+P
Sbjct: 877 MPIFSYATVNFPVKDMELRD---------YIPSLPRAPEGENVCSKYNLIANIVHDGKPE 927
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+G +RV + K WYE+QDLHV + LPQM+ L+EAY+QIYE
Sbjct: 928 DGYFRVFVQRKSQELWYEMQDLHVAETLPQMVELSEAYMQIYE 970
>gi|296805165|ref|XP_002843407.1| ubiquitin C-terminal hydrolase Ubp10 [Arthroderma otae CBS 113480]
gi|238844709|gb|EEQ34371.1| ubiquitin C-terminal hydrolase Ubp10 [Arthroderma otae CBS 113480]
Length = 604
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 188/384 (48%), Gaps = 76/384 (19%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL + P ++ L RFG L+RKLWNPR FK+HVSPHE+LQ
Sbjct: 240 LAHVRPIRNFFL-------LHDFPALNTPQLPLRFGMLVRKLWNPRAFKAHVSPHELLQE 292
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNG---TKKKDSSIVYKTFLGSMKVKTRK 118
V + S K+F T+QSDPI+FLSWFLN LH L G K SS++ F G ++++++
Sbjct: 293 VAIRSSKRFTLTKQSDPIEFLSWFLNNLHLTLGGSKKQSSKPSSVIQSAFHGKLRIESQA 352
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I + RL+ +E T +PFL LT DLPP PLF+ ++IIPQV L T+L
Sbjct: 353 I--TARSDSANARLVFSESSTTTSQINPFLILTLDLPPTPLFQSSNKDSIIPQVPLTTLL 410
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNV 237
K+N + E ++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +
Sbjct: 411 NKYNGITASEKLAHR---VRHRLLHPLPPYLLFHIKRFSKNKFVAERNPTIVTFPSPHGL 467
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD------GEPSNG-------- 283
D + P+ + E +YDLVAN++ D G P N
Sbjct: 468 DMSPYVEPDPS----------ILPPGEPIIYDLVANVILDAAVNIPGGPENAANSAETSK 517
Query: 284 ------------------------TYRVHLYHKGIG------------KWYEIQDLHVTD 307
++ + L+ K + +W E QDL V
Sbjct: 518 ELSETGPSASSTTTPGAAAGNHKVSWLIQLHDKAMAAENAQQQQQKGPEWLEAQDLWVKR 577
Query: 308 ILPQMITLTEAYIQIYELRTTPSP 331
+ + E Y+ ++E R P
Sbjct: 578 TESETLFTREGYLMVWERRKMKPP 601
>gi|300176119|emb|CBK23430.2| unnamed protein product [Blastocystis hominis]
Length = 501
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 181/370 (48%), Gaps = 70/370 (18%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HVTP+RD+FL NY+ P LV FG L+RKLW+ FK +V+P+E L
Sbjct: 153 ALSHVTPIRDFFLIPANYSYTSNP-------LVHSFGVLIRKLWSHTRFKCNVTPYEFLN 205
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTR--- 117
V S ++F E+ D +FL W LN+LH AL + K ++++ + F G ++V R
Sbjct: 206 EVTRSSNEKFTVKERRDASEFLCWLLNSLHTALKDKEHK-TTVIDRCFKGRIEVTRRTYK 264
Query: 118 ------------------KIPPVEL-------EEKVRQRLLLTEEYKETET-ESPFLYLT 151
K PP ++ Q L E ET + + L+
Sbjct: 265 LVGISGFQKSSRIPVSAWKWPPTTAACTSTFPRPRISQILAGNEAKVETAVKQQDYWMLS 324
Query: 152 CDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLIL 211
DLPP PLF++ ++++ ++ LY++L KF+ E+ K EN K + I LP YLI
Sbjct: 325 LDLPPIPLFRNSNNDSVVNKLPLYSLLKKFDGETPT--KEIWENAEKTYRIVKLPRYLIF 382
Query: 212 YVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLV 271
+ RF KN FF EKN +IV FP++N++ P +A + +DLV
Sbjct: 383 AIHRFQKNEFFFEKNTSIVQFPIRNMEMRHFFFPPRRAA--------------TVEFDLV 428
Query: 272 ANIVHDGE-----------------PSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
ANI HD + + G+YR+H+ + +WYEIQ+L V +++
Sbjct: 429 ANICHDVDLEEDREKKKRNPLLENPVTKGSYRIHMKNNADDEWYEIQELVVKPTRAELVM 488
Query: 315 LTEAYIQIYE 324
L+E+ I ++E
Sbjct: 489 LSESSILVFE 498
>gi|363746060|ref|XP_003643514.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like, partial
[Gallus gallus]
Length = 228
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/99 (76%), Positives = 83/99 (83%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 128 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 187
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK 99
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GTKKK
Sbjct: 188 AVVLCSKKNFQITKQGDGVDFLSWFLNALHSALGGTKKK 226
>gi|198420341|ref|XP_002120475.1| PREDICTED: zinc finger (ubiquitin thiolesterase type)-4, partial
[Ciona intestinalis]
gi|93003316|tpd|FAA00241.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 296
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/101 (70%), Positives = 87/101 (86%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV PLR+YFLRE NY+ +KRPPGD LL QRFGEL+RKLWNPRNFK+HVSPHEMLQ
Sbjct: 196 ALSHVPPLRNYFLREQNYSHIKRPPGDIMILLSQRFGELIRKLWNPRNFKAHVSPHEMLQ 255
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDS 101
++VL SRK+FQ T+Q DP+D L+WFLN+++ ALNG+KK+ S
Sbjct: 256 SIVLCSRKRFQITKQGDPLDLLTWFLNSMNVALNGSKKRTS 296
>gi|74207475|dbj|BAE39991.1| unnamed protein product [Mus musculus]
Length = 336
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/96 (76%), Positives = 80/96 (83%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 241 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 300
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT 96
AVVL S+K FQ T+Q D +DFLSWFLN LH AL GT
Sbjct: 301 AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGT 336
>gi|15235641|ref|NP_193972.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis
thaliana]
gi|5738372|emb|CAB52815.1| putative protein [Arabidopsis thaliana]
gi|7269087|emb|CAB79196.1| putative protein [Arabidopsis thaliana]
gi|332659205|gb|AEE84605.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis
thaliana]
Length = 340
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/229 (45%), Positives = 136/229 (59%), Gaps = 25/229 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L VTPLR++F NY K P LV FGEL RK+W+ RNFK VSPHE LQ
Sbjct: 133 SLMRVTPLRNFFHIPENYQHCKSP-------LVHCFGELTRKIWHARNFKGQVSPHEFLQ 185
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV+ S+K+F+ +QSDP++F+SW LNTLH L T K SSI++K F G ++V
Sbjct: 186 AVMKASKKRFRIGQQSDPVEFMSWLLNTLHMDLR-TSKDASSIIHKCFQGELEV------ 238
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
V++ E KE S FL L DLPPPPLFKD + +NIIPQV L+ +L K
Sbjct: 239 -------VKE--FQGNENKEISRMS-FLMLGLDLPPPPLFKDVMEKNIIPQVALFDLLKK 288
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
F+ E+ E K + R+ + P YL+ ++ RF KN FF EKNPT+
Sbjct: 289 FDGETVTEVVRPKLARM-RYRVIKSPRYLMFHMVRFKKNNFFKEKNPTL 336
>gi|313246467|emb|CBY35373.1| unnamed protein product [Oikopleura dioica]
Length = 492
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 102/161 (63%), Gaps = 20/161 (12%)
Query: 170 PQVNLYTILTKFNNESEKEYKTYKEN----FLKRFEITSLPPYLILYVKRFTKNTFFVEK 225
P V++ T+L KFN + EKEYK E+ LKRF + LP LI ++RFTKN FFVEK
Sbjct: 303 PYVHINTLLEKFNGQQEKEYKLKGEDRRDPLLKRFRVVRLPDVLIFQIQRFTKNNFFVEK 362
Query: 226 NPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTY 285
NPTIV +PV ++D G Y L E ++DLVANIVHDGEP +G+Y
Sbjct: 363 NPTIVQYPVSSLDMGP--------------YCLEDDGQE--IFDLVANIVHDGEPKDGSY 406
Query: 286 RVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
R+H+ HK W EIQDL V+D LP+MI L+EA+IQI+ R
Sbjct: 407 RIHVNHKLTNMWKEIQDLVVSDALPEMIPLSEAFIQIWVRR 447
>gi|240281183|gb|EER44686.1| U4/U6.U5 tri-snRNP-associated protein [Ajellomyces capsulatus H143]
Length = 587
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 145/278 (52%), Gaps = 55/278 (19%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HV P+R++FL + + P + L RFG L+RKLWNPR FKSHVSPHE+LQ
Sbjct: 246 LSHVRPIRNFFL-------LHQFPMPGTPQLPLRFGILVRKLWNPRAFKSHVSPHELLQE 298
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
V L S K+F T+QSDP+DFLSWFLN LH +L G+KK + + L +
Sbjct: 299 VALRSSKRFTLTQQSDPVDFLSWFLNNLHLSLGGSKKPSPTPTSRNNLAN---------- 348
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKF 181
+ F ++T DLP F+ + IIPQ+ L T+L K+
Sbjct: 349 -----------------------NTFPHITLDLPSHTTFQSQC-RIIIPQIPLTTLLNKY 384
Query: 182 NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV-KNVDFG 240
N E +++ ++ + LPPYL+ ++KRF+KN F E+NPTIV FP +++D
Sbjct: 385 NGLVASEKLSHR---VRHRLLHPLPPYLLFHIKRFSKNKFVSERNPTIVTFPSPRSLDMS 441
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG 278
+ P V + E +YDLVAN++ D
Sbjct: 442 PYVEPNPS----------VCSAGEPILYDLVANVILDA 469
>gi|221060993|ref|XP_002262066.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein
[Plasmodium knowlesi strain H]
gi|193811216|emb|CAQ41944.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein,
putative [Plasmodium knowlesi strain H]
Length = 682
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 115/191 (60%), Gaps = 14/191 (7%)
Query: 134 LTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYK 193
L EE + PF L+ LP PP+FK NIIPQV+++ +LTKF+ E+E
Sbjct: 495 LNEEKNYVTEKIPFRTLSLKLPNPPIFKSTTESNIIPQVSIFELLTKFDGETESFLNEKS 554
Query: 194 ENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYES 253
E ++ LP YL+ +KRF+KN FFVEKN TIVNF +KN+D D + +E
Sbjct: 555 E--PSTLILSKLPKYLVFTIKRFSKNNFFVEKNGTIVNFVIKNLDMKDYI-------HED 605
Query: 254 TMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMI 313
+ K T Y+L+ANI H G +NGTY++H+ ++ +WYE++DLHV +LPQ++
Sbjct: 606 YL-----EKNPVTKYNLIANIFHSGSVNNGTYKIHVLNQASNEWYEMEDLHVITVLPQLV 660
Query: 314 TLTEAYIQIYE 324
L E+ +Q+Y+
Sbjct: 661 LLPESCVQLYQ 671
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
+C + PLR++FL N V + +V EL++K++NPRNFK VSPHE LQ
Sbjct: 221 VCSIIPLRNFFLVFENKKYVSKN-------IVSSLSELIKKIFNPRNFKGVVSPHEFLQT 273
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
V + S+K F+ ++DP+DF W ++ +HR
Sbjct: 274 VGIESKKTFKIGSKNDPLDFFLWLISKIHR 303
>gi|452818584|gb|EME25856.1| ubiquitin thiolesterase/ zinc ion binding protein [Galdieria
sulphuraria]
Length = 197
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 116/196 (59%), Gaps = 13/196 (6%)
Query: 129 RQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKE 188
R + + K+ S FL+L+ +LPP PLFKD + N+IPQV+L ++L++F + E
Sbjct: 13 RDDFIRADIIKKDHKSSQFLFLSLELPPMPLFKDSLERNMIPQVSLSSLLSRFVQQ-ELH 71
Query: 189 YKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVK 248
+ +F R+ + LP LIL +KRF K+ F EKN +IV+FP++++D + L+
Sbjct: 72 HDVQTGHFY-RYRLRRLPYCLILVMKRFAKSNFVWEKNISIVHFPIRDLDMTEYLSMSCP 130
Query: 249 AKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDI 308
+ +YDL A ++HDG+P GTYR ++ HK W+EIQDL V +
Sbjct: 131 G-----------IESNGVVYDLTAVVIHDGKPKGGTYRCYIRHKASDSWFEIQDLQVKEA 179
Query: 309 LPQMITLTEAYIQIYE 324
+PQ+++L+EAYI YE
Sbjct: 180 IPQLVSLSEAYILFYE 195
>gi|50552960|ref|XP_503890.1| YALI0E13167p [Yarrowia lipolytica]
gi|49649759|emb|CAG79483.1| YALI0E13167p [Yarrowia lipolytica CLIB122]
Length = 440
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 161/329 (48%), Gaps = 44/329 (13%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L H PLR+Y L P +S+ +V ++ R++WNPR FK+HVSPHE++
Sbjct: 147 LSHTKPLRNYLLL--------HPKSESA--IVSALSQISRRIWNPRAFKNHVSPHELVNL 196
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
S+ +F Q+DP FL W L H L G+ K SS+++ F G + T K+
Sbjct: 197 AEKLSQGKFSANFQADPCQFLVWLLVQTHLGLGGSSKPGSSLIHHIFQGKLNKTTEKLSE 256
Query: 122 VELEEKVRQRLLLTEEYKETETES-PFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
E+ K + K ++T PFL LT DLP +FKD + + V L +L K
Sbjct: 257 REVSGKS------VFDVKSSKTTCIPFLLLTLDLPAESVFKDGDNDTTLEHVPLTRLLKK 310
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRF-TKNTFFVEKNPTIVNFPVKNVDF 239
++ + +E + ++I SLP YLIL+ KRF T E N TIVNFP+K +D
Sbjct: 311 YDGVTCEELAGERNT----YQIVSLPKYLILHYKRFSTLPDGTKEYNGTIVNFPLKGLD- 365
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANI-VHDGEPSNGTYRVHLYHKGIGKWY 298
+ P K ++ K Y+L+ NI G+ + V + G W
Sbjct: 366 ---MAPYTKG---------LEGK-----YNLITNITCEGGDKKEKEWSVQMRDGGRKTWV 408
Query: 299 EIQDLHVTDI--LPQ-MITLTEAYIQIYE 324
+++DL V+D+ L Q + L E YIQ+++
Sbjct: 409 DVRDLVVSDVTELGQDSLYLKEVYIQVWK 437
>gi|156102809|ref|XP_001617097.1| ubiquitin carboxyl-terminal hydrolase [Plasmodium vivax Sal-1]
gi|148805971|gb|EDL47370.1| ubiquitin carboxyl-terminal hydrolase, putative [Plasmodium vivax]
Length = 685
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 111/179 (62%), Gaps = 14/179 (7%)
Query: 146 PFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSL 205
PF L+ LP PP+FK NIIPQV+++ +LTKF+ E+E E I+ L
Sbjct: 510 PFRTLSLKLPNPPIFKSTTESNIIPQVSIFELLTKFDGETESFLNEKSE--PSTLIISKL 567
Query: 206 PPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYES 265
P YL+ +KRF++N FFVEKN TIVNF +KN+D D + +E + K
Sbjct: 568 PKYLVFTIKRFSRNNFFVEKNGTIVNFVIKNLDMKDYV-------HEDYL-----EKNPV 615
Query: 266 TMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
T Y+L+ANI H G S+GTY++H+ ++ +WYE++DLHV +LPQ++ L E+ +Q+Y+
Sbjct: 616 TKYNLIANIFHSGSVSSGTYKIHVLNQASNEWYEMEDLHVITVLPQLVLLPESCVQLYQ 674
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 9/91 (9%)
Query: 2 LCHVTPLRDYFLR-EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+C + PLR++FL E K ++ EL++K++NPRNFK VSPHE LQ
Sbjct: 229 VCSIIPLRNFFLVFETKKYMAKN--------IISSLSELIKKIYNPRNFKGVVSPHEFLQ 280
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
V + S+K F+ Q+DP+DF W ++ +HR
Sbjct: 281 TVGIESKKNFKIGSQNDPLDFFLWLISKIHR 311
>gi|83318021|ref|XP_731414.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23491448|gb|EAA22979.1| Arabidopsis thaliana At4g22410/F7K2_7-related [Plasmodium yoelii
yoelii]
Length = 640
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 110/191 (57%), Gaps = 34/191 (17%)
Query: 144 ESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKR---- 199
++PF L+ LP PP+FK NIIPQV+++ +LTK++ E+E FL
Sbjct: 463 KTPFRTLSLKLPNPPIFKSTTESNIIPQVSIFELLTKYDGETET--------FLSDKATP 514
Query: 200 --FEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
I+ LP YLI ++RF+KN FF EKN TIVNF +KN+D M D
Sbjct: 515 STLIISKLPKYLIFTIQRFSKNNFFTEKNGTIVNFVIKNLD----------------MKD 558
Query: 258 LVKAKYES----TMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMI 313
V Y T Y+LVANI H G +NG+Y++H+ + +WYEI+DLHV ILPQ++
Sbjct: 559 YVHQDYLDQNPVTKYNLVANIFHSGTVTNGSYKIHVLQQATNEWYEIEDLHVISILPQLV 618
Query: 314 TLTEAYIQIYE 324
L E+ IQ+Y+
Sbjct: 619 LLPESCIQLYQ 629
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 7/90 (7%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
LC + PLR+ L + + + L+ EL++K++NP+NFK VSPHE LQA
Sbjct: 226 LCCIVPLRNMLLLYESKQNIAKN-------LIVVLAELLKKIYNPKNFKGVVSPHEFLQA 278
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
V + S+K F+ ++DP++F W +N +HR
Sbjct: 279 VGIESKKNFKIGTKNDPLNFFLWIINKIHR 308
>gi|410832770|gb|AFV92867.1| putative ubiquitinyl hydrolase 1, partial [Eimeria tenella]
Length = 182
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 115/218 (52%), Gaps = 36/218 (16%)
Query: 84 WFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETET 143
W LN LHR KK SI++ F G + L+T+ E
Sbjct: 1 WLLNVLHRD-QKDKKTGGSIIHDCFQGEV--------------------LVTDAQSEEGR 39
Query: 144 ESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEIT 203
++PFLYLT DLPP P+FKD + N+IP V ++ +L KF+ E++ + K+ +
Sbjct: 40 KTPFLYLTLDLPPAPIFKDSLDRNMIPTVPIFDLLQKFDGETDSGPTPLQR---KKCSLY 96
Query: 204 SLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKY 263
LP YL+L VKRF+KN FFVEKNPTIV FPVKN+D + + P+
Sbjct: 97 KLPRYLVLAVKRFSKNNFFVEKNPTIVTFPVKNLDLREYVHPD------------ALEDN 144
Query: 264 ESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQ 301
T Y+LVANI H G+P +G Y+ + H +W+E++
Sbjct: 145 PVTRYNLVANICHQGKPHDGFYKAQVLHAPTNEWHEME 182
>gi|68075081|ref|XP_679457.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein
[Plasmodium berghei strain ANKA]
gi|56500209|emb|CAH98685.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein,
putative [Plasmodium berghei]
Length = 634
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 110/191 (57%), Gaps = 34/191 (17%)
Query: 144 ESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKR---- 199
++PF L+ LP PP+FK NIIPQV+++ +LTK++ E+E FL
Sbjct: 457 KTPFRTLSLKLPNPPIFKSTTESNIIPQVSIFELLTKYDGETET--------FLSDKAIP 508
Query: 200 --FEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
I+ LP YLI ++RF+KN FF EKN TIVNF +KN+D M D
Sbjct: 509 STLIISKLPKYLIFTIQRFSKNNFFTEKNGTIVNFVIKNLD----------------MKD 552
Query: 258 LVKAKYES----TMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMI 313
V Y T Y+LVANI H G +NG+Y++H+ + +W+EI+DLHV ILPQ++
Sbjct: 553 YVHQDYLDQNPVTKYNLVANIFHSGTVTNGSYKIHVLQQATNEWHEIEDLHVISILPQLV 612
Query: 314 TLTEAYIQIYE 324
L E+ IQ+Y+
Sbjct: 613 LLPESCIQLYQ 623
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 7/90 (7%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
LC + PLR+ L + + + L+ EL++K++NP+NFK VSPHE LQA
Sbjct: 226 LCCIVPLRNMLLLYESKQNIAKN-------LIVVLAELLKKIYNPKNFKGVVSPHEFLQA 278
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
V + S+K F+ ++DP++F W +N +HR
Sbjct: 279 VGIESKKNFKIGTKNDPLNFFLWIINKIHR 308
>gi|190345136|gb|EDK36962.2| hypothetical protein PGUG_01060 [Meyerozyma guilliermondii ATCC
6260]
Length = 487
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 162/339 (47%), Gaps = 45/339 (13%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDS-------SFLLVQRFGELMRKLWNPRNFKSHV 53
AL H+ P+RD+ L P DS + LV FG ++RK+W+ FK HV
Sbjct: 169 ALAHIQPIRDFLLL---------LPNDSLYEVLEHKYPLVSMFGLMVRKIWSRHLFKPHV 219
Query: 54 SPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMK 113
SPHE LQ V L S+K F T QS P F+ WFLN LH L K +I+ KT G +
Sbjct: 220 SPHEFLQLVSLMSKKSFSITHQSSPKHFMVWFLNQLHSQLTRAIGKKRTILSKTLQGEII 279
Query: 114 VKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVN 173
V T IP V+ + +E + + S F +L+ L P K + + +PQV+
Sbjct: 280 VTT--IPVVQKQASDSTVQFERQESMKKISISKFWHLSLSLGPASALKIQDTNDTVPQVS 337
Query: 174 LYTILTKFNN-----ESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPT 228
+ ++L+K++ S E +TYK + PP+LI+++ R + + NPT
Sbjct: 338 IESLLSKYDGTTTSQASASELRTYKLKYPG-------PPFLIMHIDRNLEEG-NIRGNPT 389
Query: 229 IVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
+V FP+ +D + P ++ + Y LV S + VA D + + +
Sbjct: 390 VVKFPMV-LD----MAPYIEGEIGPQKYQLV----SSIKHHYVAGDTIDHKHDKQQWSIS 440
Query: 289 LY---HKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
L HK +W IQDL VT + + + L E YIQ+++
Sbjct: 441 LLADSHK--SEWVHIQDLDVTKVDGEFLFLDETYIQVWK 477
>gi|124513102|ref|XP_001349907.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein
[Plasmodium falciparum 3D7]
gi|23615324|emb|CAD52315.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein
[Plasmodium falciparum 3D7]
Length = 640
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 111/186 (59%), Gaps = 27/186 (14%)
Query: 146 PFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLK---RFEI 202
PF L+ LP P+FK NIIPQV+++ +L+KF+ E+E T+ + K I
Sbjct: 465 PFRTLSLKLPNAPVFKSTTESNIIPQVSIFELLSKFDGETE----TFLQEHFKIPNTLII 520
Query: 203 TSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAK 262
+ LP YLI ++RF+KN FF+EKN TIVNF +KN+D M D V
Sbjct: 521 SKLPKYLIFTIERFSKNNFFIEKNGTIVNFVIKNLD----------------MKDYVHED 564
Query: 263 YES----TMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEA 318
+ S T Y+L+ANI H G + G+Y++H+ ++ +WYEI+DLHV ILPQ++ L E+
Sbjct: 565 FLSLNPVTKYNLIANIFHTGTVNQGSYKIHVLNQPTNEWYEIEDLHVISILPQLVLLPES 624
Query: 319 YIQIYE 324
IQ+Y+
Sbjct: 625 CIQLYQ 630
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
+C + PLR+ L + + ++ +L++K++NPRNFK VSPHE LQA
Sbjct: 226 ICSIIPLRNTLLLYECKENIAKN-------IIVVLSDLIKKIYNPRNFKGVVSPHEFLQA 278
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
V + S K F+ + P+DF W LN ++R N KK K G MK K P
Sbjct: 279 VGIESNKNFKIGTKKYPLDFFLWLLNKIYRHSNKMLKKRKLSTLKKKTGYMKRKLEDNEP 338
Query: 122 VELEEK 127
V EEK
Sbjct: 339 VSKEEK 344
>gi|448080029|ref|XP_004194524.1| Piso0_005023 [Millerozyma farinosa CBS 7064]
gi|359375946|emb|CCE86528.1| Piso0_005023 [Millerozyma farinosa CBS 7064]
Length = 514
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 172/348 (49%), Gaps = 53/348 (15%)
Query: 1 ALCHVTPLRDYFLR-EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
AL H+ P+RD++L + + ++ +L F L++KLW+ FK+HVSPHE L
Sbjct: 194 ALSHIAPIRDFYLGLSLEKNQTEQELVSRKSVLNHNFEILLKKLWSQHLFKNHVSPHEFL 253
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKI 119
Q V + K+F T ++ P DFL+W LN LH L T + SI+ KT G+++V T I
Sbjct: 254 QVVSSITSKKFSTTSETSPKDFLAWLLNRLHSDLVKTFARKRSILSKTLQGNVEVITIPI 313
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVL---ENIIPQVNLYT 176
E ++ + EE K++ + + L+ DLPP PLFK+ V N IPQV+++
Sbjct: 314 EAKTNEYTLKVDFSIQEE-KKSSKKINYWMLSLDLPPDPLFKNSVTGKYGNEIPQVSIFE 372
Query: 177 ILTKFNNE-----SEKEYKTYKENFLKRFEITSLPPYLILYVKRFT----KNTFFVEKNP 227
+L K++ + + E ++YK + LPPY+IL+ R KN NP
Sbjct: 373 LLKKYDGKQTVQSTSTELRSYK-------LLEPLPPYIILFYDRGIEEPEKNK---RGNP 422
Query: 228 TIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGT--- 284
T+V FP++ +DF L K+ Y L++NI H E S GT
Sbjct: 423 TVVKFPLE-IDFSQYLEKPSKSPLN---------------YRLISNIKH--ESSVGTDIE 464
Query: 285 -------YRVHLYHKGIG-KWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+ + L +W I+DL + +++ L+E Y+QI+E
Sbjct: 465 RSIDKEQWSIDLRKSDTDEEWTTIRDLEIEKCNKELMFLSECYLQIWE 512
>gi|448084506|ref|XP_004195622.1| Piso0_005023 [Millerozyma farinosa CBS 7064]
gi|359377044|emb|CCE85427.1| Piso0_005023 [Millerozyma farinosa CBS 7064]
Length = 514
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 171/345 (49%), Gaps = 47/345 (13%)
Query: 1 ALCHVTPLRDYFLR-EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
AL H+ +RD++L + + + +L F L++KLW+ FK+HVSPHE L
Sbjct: 194 ALSHIVLIRDFYLSLSLEENQSEHELVSRKSVLNHNFEVLLKKLWSQHLFKNHVSPHEFL 253
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKI 119
Q V + K+F T ++ P DFL W LN LH L T + SI+ KT G+++V T I
Sbjct: 254 QVVSSITSKKFSTTSETSPKDFLVWLLNRLHSDLVKTFSRKRSILSKTLQGNVEVITIPI 313
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEV---LENIIPQVNLYT 176
E ++ + EE K++ ++ + L+ DLPP PLFK+ V N IPQV+++
Sbjct: 314 EAKTNEYTLKVDFSIQEE-KKSSKKTNYWMLSLDLPPDPLFKNSVSGKYGNEIPQVSIFE 372
Query: 177 ILTKFNN-----ESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEK-NPTIV 230
+L K+N S E ++YK + LPPY+IL+ R + ++ NPT+V
Sbjct: 373 LLKKYNGTQTVQSSSTELRSYK-------LLEPLPPYIILFYDRGIEEPGKSKRGNPTVV 425
Query: 231 NFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGT------ 284
FP++ +DF + L K+ Y L++NI H E S GT
Sbjct: 426 KFPLE-IDFSEYLEKPSKSPLN---------------YRLISNIKH--ESSVGTDIERSI 467
Query: 285 ----YRVHLYHKGIG-KWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+ + L +W I+DL + +++ L+E Y+QI+E
Sbjct: 468 DKEQWSIDLRKSDTDEEWTTIRDLEIERCNKELMFLSECYLQIWE 512
>gi|209875567|ref|XP_002139226.1| ubiquitin carboxyl-terminal hydrolase family protein
[Cryptosporidium muris RN66]
gi|209554832|gb|EEA04877.1| ubiquitin carboxyl-terminal hydrolase family protein
[Cryptosporidium muris RN66]
Length = 469
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 179/355 (50%), Gaps = 62/355 (17%)
Query: 2 LCHVTPLRDYFL-----REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPH 56
L + PLRD+FL N+ ++ + P D L+ E++ K++NP NFK SP
Sbjct: 140 LSRIIPLRDFFLYFPIYDSENFQKISKVPLDK---LMFSIIEIVCKIFNPYNFKGMASPF 196
Query: 57 EMLQAVVL--------------WSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSS 102
+ + S K Q T+ DP+ LSW ++ + + L+ K
Sbjct: 197 VLANTIERKSNSLLPVSTNTEKQSNKTSQDTQFVDPMALLSWIIHYMKKKLSKIKLGYQR 256
Query: 103 IVYKTFLGSMKVKTRKIPPVELEEKVR----------QRLLLTEEYKET---ETESPFLY 149
Y+ + K++ I +E +V + L L+ + ++ T + F+
Sbjct: 257 CFYQDKMS----KSKNIIASCIEGQVLNCTKINGIEPKSLNLSYDSMKSVHGSTVNSFIS 312
Query: 150 LTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYL 209
L+ ++P P + + L++ IPQ+ ++ +L N+ + T+++ +L LP YL
Sbjct: 313 LSLNIPLPSVL-NPSLDSRIPQIAIFDLL---QNKFLENSSTFQKIWL-------LPCYL 361
Query: 210 ILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYD 269
I++ KRF+ +F +EKNPTI++FP+KN+D L P V D + A +T YD
Sbjct: 362 IVHFKRFSMESFGLEKNPTIISFPIKNLD----LLPYVHP-------DNLHAN-PNTKYD 409
Query: 270 LVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
L+ANI H G+ +G + + +YH G +WYEI++L V ILPQ + LT +YIQ+Y+
Sbjct: 410 LIANIAHKGDTKSGVFTIQMYHSGRNEWYEIENLKVEQILPQALLLTTSYIQLYK 464
>gi|146423511|ref|XP_001487683.1| hypothetical protein PGUG_01060 [Meyerozyma guilliermondii ATCC
6260]
Length = 487
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 159/339 (46%), Gaps = 45/339 (13%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDS-------SFLLVQRFGELMRKLWNPRNFKSHV 53
AL H+ P+RD+ L P DS + LV FG ++RK+W+ FK HV
Sbjct: 169 ALAHIQPIRDFLLLL---------PNDSLYEVLEHKYPLVSMFGLMVRKIWSRHLFKPHV 219
Query: 54 SPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMK 113
SPHE LQ V L S+K F T QS P F+ WFLN LH L K +I+ KT G +
Sbjct: 220 SPHEFLQLVSLMSKKSFSITHQSSPKHFMVWFLNQLHSQLTRAIGKKRTILSKTLQGEII 279
Query: 114 VKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVN 173
V T IP V+ + +E + + F +L+ L P K + + +PQV+
Sbjct: 280 VTT--IPVVQKQASDSTVQFERQESMKKISILKFWHLSLSLGPASALKIQDTNDTVPQVS 337
Query: 174 LYTILTKFNN-----ESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPT 228
+ +L K++ S E +TYK + PP+LI+++ R + + NPT
Sbjct: 338 IELLLLKYDGTTTSQASASELRTYKLKYPG-------PPFLIMHIDRNLEEG-NIRGNPT 389
Query: 229 IVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
+V FP+ +D + P ++ + Y LV S + VA D + + +
Sbjct: 390 VVKFPMV-LD----MAPYIEGEIGPQKYQLV----SSIKHHYVAGDTIDHKHDKQQWSIS 440
Query: 289 LY---HKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
L HK +W IQDL VT + + + L E YIQ+++
Sbjct: 441 LLADSHK--SEWVHIQDLDVTKVDGEFLFLDETYIQVWK 477
>gi|159478228|ref|XP_001697206.1| hypothetical protein CHLREDRAFT_119899 [Chlamydomonas reinhardtii]
gi|158274680|gb|EDP00461.1| predicted protein [Chlamydomonas reinhardtii]
Length = 124
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 87/124 (70%), Gaps = 3/124 (2%)
Query: 202 ITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDIL-TPE--VKAKYESTMYDL 258
IT LP YL L+ +RFTKN FF+EKNPT+VNFPVKN++ D+L PE A +
Sbjct: 1 ITRLPRYLALHYRRFTKNNFFIEKNPTLVNFPVKNLELRDVLPLPERPAAAGGAAAGAPH 60
Query: 259 VKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEA 318
A S+ YDLVAN+VHDG+ +G+YRVH++ + WYE+QDL VTDILPQM+ L+EA
Sbjct: 61 ADAFALSSKYDLVANLVHDGKAGSGSYRVHVHRRVEDIWYEVQDLTVTDILPQMVALSEA 120
Query: 319 YIQI 322
Y Q+
Sbjct: 121 YFQV 124
>gi|294659093|ref|XP_461434.2| DEHA2F25168p [Debaryomyces hansenii CBS767]
gi|202953612|emb|CAG89849.2| DEHA2F25168p [Debaryomyces hansenii CBS767]
Length = 534
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 172/344 (50%), Gaps = 44/344 (12%)
Query: 1 ALCHVTPLRDYFL-------REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHV 53
AL H+ P+RD++L +++N +++ L FG L+RKLW+ FK H+
Sbjct: 213 ALSHIPPIRDFYLSLTIPEKKDLNERIIRKSQ------LNNLFGLLVRKLWSSYLFKGHI 266
Query: 54 SPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMK 113
SPHE+LQ + S+K+F EQ P F+ W LN LH L + K +S+I K+ GS++
Sbjct: 267 SPHELLQYISSVSKKKFGIAEQKSPKAFMVWLLNQLHIQLIKSIKNNSTIFSKSLQGSIQ 326
Query: 114 VKTRKIPPVELEEKVRQRLLLTEEYKETETE-SPFLYLTCDLPPPPLFKDEVLE----NI 168
V T IP K+ ++ + K+ T S F L+ D+P LF+ + +
Sbjct: 327 VST--IPITATTNKLTNKVDFNVQDKDKVTNLSKFWVLSLDIPGNALFQGTSNQGEQTSQ 384
Query: 169 IPQVNLYTILTKFNNE-----SEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFV 223
IPQV++ ++L K++ + S E K Y+ + LPPY+I ++ R N
Sbjct: 385 IPQVSIQSLLEKYDGKTTVQVSRAELKVYQ-------LVEPLPPYIIFHIDRGLDNDDEN 437
Query: 224 EK-NPTIVNFPVKNVDFGDILTPEV-KAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
+ NPT+V FP +D ++P V + E Y L+ S ++L+ I D
Sbjct: 438 SRGNPTVVKFP-SVID----MSPYVLNSGNEPIRYKLI----SSIKHELIPGIKLDHGDD 488
Query: 282 NGTYRVHLY-HKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+ V+L + +W I+DL V + +++ L E++IQ++E
Sbjct: 489 KHQWSVNLCKDQETNQWVTIRDLEVENCESELMFLDESFIQVWE 532
>gi|294463557|gb|ADE77307.1| unknown [Picea sitchensis]
Length = 336
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 80/117 (68%), Gaps = 7/117 (5%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L VTPLR++FL NY K P LV RFGEL RK+W+ RNFK VSPHE LQ
Sbjct: 226 SLMRVTPLRNFFLIPENYQNCKSP-------LVHRFGELTRKIWHSRNFKGQVSPHEFLQ 278
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTR 117
AV++ S+K+F+ QSDP++F+SW LNTLH L GTKK +SSI+YK F + +K R
Sbjct: 279 AVMVASKKRFRIGAQSDPVEFMSWLLNTLHADLGGTKKSNSSIIYKCFQVVLLIKLR 335
>gi|429328899|gb|AFZ80658.1| ubiquitin carboxyl-terminal hydrolase, putative [Babesia equi]
Length = 161
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 102/168 (60%), Gaps = 22/168 (13%)
Query: 150 LTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYL 209
L ++P P+FKD NIIPQV+++ +L K++ +E +Y ++++ I LP YL
Sbjct: 2 LMLEVPDAPIFKDSHERNIIPQVSIFDLLKKYDGNTE----SYVSGKIQKYSIWRLPEYL 57
Query: 210 ILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDIL---TPEVKAKYESTMYDLVKAKYEST 266
IL VKRF KN +F EKNPTIV FP+KN+D + + +PE K E+
Sbjct: 58 ILIVKRFFKNEYFEEKNPTIVAFPMKNLDLSEYVDEDSPE---------------KGENA 102
Query: 267 MYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDLV NI H+G+P +G+++V ++H WY+++DL VT +LPQ +
Sbjct: 103 RYDLVCNICHEGKPKDGSFKVFVFHPPSSNWYQLEDLLVTQVLPQFVA 150
>gi|367011451|ref|XP_003680226.1| hypothetical protein TDEL_0C01260 [Torulaspora delbrueckii]
gi|359747885|emb|CCE91015.1| hypothetical protein TDEL_0C01260 [Torulaspora delbrueckii]
Length = 459
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 155/341 (45%), Gaps = 60/341 (17%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL H+ PLRDY L A++ D +R +RK+W+ + FK HVS E L
Sbjct: 166 ALAHLRPLRDYCL----LAKI-----DQEDEFTRRLALFIRKIWSVKLFKQHVSVDEFLA 216
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
V + ++ + +DP L W L + + K SI+ + G + V +
Sbjct: 217 FVTVNDKRSAK--NLNDPRKCLLWLL----ECIQTSAPKLKSILSEACQGKVLVTKTGVK 270
Query: 121 PV-ELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+ + +E V+ T E T PF LT DLPP PLFK ++ N +PQV L ++
Sbjct: 271 VIYDEDENVKD---FTREKSSKSTSVPFWSLTLDLPPRPLFKGQINVNDLPQVRLEDLMC 327
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRF--TKNTFFVEKNPTIVNFPVKNV 237
KFN EK+ + + +++I LP YL+L+V RF T +N T+V FP+
Sbjct: 328 KFNGIKEKQMSHH----IMQYKILKLPKYLVLHVDRFDSTDAQPVKNRNHTLVEFPL--- 380
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRV---------- 287
TM K E + Y L+ANIVH + GT RV
Sbjct: 381 ----------------TM------KVEGSTYKLLANIVHQVSRTAGTTRVEKDDQSNWII 418
Query: 288 HLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTT 328
LY+ I +W EI +V +++ L E YIQI+EL T
Sbjct: 419 QLYNSAIDQWVEIDGSNVRTKDKELLFLNEIYIQIWELETA 459
>gi|350582186|ref|XP_003125016.3| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like, partial
[Sus scrofa]
Length = 316
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 64/75 (85%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL +V PLR+YFL E NY +KRPPGD FLLVQRFGELMRKLWNPRNFK+HVSPHEMLQ
Sbjct: 242 ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ 301
Query: 61 AVVLWSRKQFQFTEQ 75
AVVL S+K FQ T+Q
Sbjct: 302 AVVLCSKKTFQITKQ 316
>gi|363755536|ref|XP_003647983.1| hypothetical protein Ecym_7334 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892019|gb|AET41166.1| hypothetical protein Ecym_7334 [Eremothecium cymbalariae
DBVPG#7215]
Length = 472
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 166/327 (50%), Gaps = 36/327 (11%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L H+ P+RDY + + +Q+F L+RK+W+P+ K HVSPHE LQ
Sbjct: 172 LSHIKPVRDY-------LLLNDNLLKKDDVFLQKFTLLIRKIWSPKLPKKHVSPHEFLQH 224
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
V S K F + DP FL + +N + ++ N +K + K G + + T KI P
Sbjct: 225 VSSISDKAFSLDRRGDPRSFLLFIVNKIMKSSNRGLRK---LFTKQLQGEVSIYTTKIEP 281
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKF 181
V +EE + + EE + T F L+ DLPP PLFKD + Q+ L +L K+
Sbjct: 282 V-MEEGNNIKFVRNEENVSSNT-VKFWILSLDLPPKPLFKDGKSVASLTQIKLEQLLKKY 339
Query: 182 NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRF-TKNTFFVEKNPTIVNFPVKNVDFG 240
N + E+ K + +K +I S PPYL+L+VKRF + N ++N +V F N+D G
Sbjct: 340 NGKVEQHTK----DSIKFSKIVSYPPYLLLHVKRFDSSNHSIKDRNQAVVEFQ-SNMDIG 394
Query: 241 DILTPEVKAKYESTMYDLV---KAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKW 297
K +Y + +L+ KY S D+ ++I+ + +++H+ ++ +W
Sbjct: 395 -------KFRYR-LVANLIYEPDLKYSS---DVQSSILDE----QCHWKIHIRNEKNDEW 439
Query: 298 YEIQDLHVTDILPQMITLTEAYIQIYE 324
+E + V +++ L+E+Y+Q++E
Sbjct: 440 FEFDGVSVRPKKKELLFLSESYMQVWE 466
>gi|150865930|ref|XP_001385345.2| ubiquitin specific protease [Scheffersomyces stipitis CBS 6054]
gi|149387186|gb|ABN67316.2| ubiquitin specific protease [Scheffersomyces stipitis CBS 6054]
Length = 489
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 156/330 (47%), Gaps = 31/330 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL H+ P+R+++L +++ + +S L FG L+RKLW+ +++HVSPHE LQ
Sbjct: 183 ALSHIVPIRNWYL-SLSHRQDLNARLESMSPLNYNFGILVRKLWSKYLYRNHVSPHEFLQ 241
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+ ++ QF T QS P L W LN LH L+ + KK S+++ G +KV + ++
Sbjct: 242 YLSSTTKNQFSITRQSTPKKLLVWLLNNLHLQLSKSIKKSSTVLSDNLRGRIKVTSMEVH 301
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
E+ +KV T+E E+ S F LT DL PLF D I +V L +L K
Sbjct: 302 TKEVNDKVE---FETDENSAKESVSSFWVLTLDLISSPLFMDVT---KIQEVALTKLLQK 355
Query: 181 FNNE-----SEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVK 235
++ + S E +TYK I LP YLI ++ R + NPT+V F
Sbjct: 356 YDGKQTSQVSSSELRTYK-------LIAPLPRYLIFHIDRGLEKDGSTRGNPTVVQFST- 407
Query: 236 NVDFGDILTPEVKAKYESTMYDLVKA-KYESTMYDLVANIVHDGEPSNGTYRVHLYHKGI 294
+D + P + +S Y L+ K +ST + D + + L +
Sbjct: 408 TID----MAPYTEGADQSLNYKLLSTIKRQST-----EGVKLDHSDDKNNWAISL-RRTD 457
Query: 295 GKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
W I+DL ++ L E Y+QI+E
Sbjct: 458 DSWVCIKDLEFNACEGGLLFLEENYLQIWE 487
>gi|397635035|gb|EJK71690.1| hypothetical protein THAOC_06844 [Thalassiosira oceanica]
Length = 631
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 122/249 (48%), Gaps = 69/249 (27%)
Query: 147 FLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNN-------ESEKEYKTYKEN---- 195
FL LT D+P PLFKD+ +IPQ L +L KF+ S+++ K+
Sbjct: 384 FLQLTLDIPEKPLFKDKDGGLVIPQEPLVNVLRKFDGVSFSDVLASQQQPAQSKQGDGTV 443
Query: 196 --FLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG------------- 240
+R+++ LP YLIL++ RF KN +F+EKNPTIV FPVKN D
Sbjct: 444 VSRKRRYKLKRLPNYLILHLSRFKKNGYFIEKNPTIVMFPVKNFDLSQYVFPEGGRDSVP 503
Query: 241 ------DILTPEVKA---KYESTMYDLVKAKYE--------------------STMYDLV 271
D+ E+KA KY + DL + E + YDLV
Sbjct: 504 SEAEVRDMSVRELKALLTKYGRS--DLAENSIEKDELVSHAVDFVTTSLPDLLADKYDLV 561
Query: 272 ANIVH--------DGEPSN----GTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAY 319
ANI H +G+ + G+YR H+ H+ G+WYE+QDL V + +PQ+I ++E+Y
Sbjct: 562 ANITHELPVEVGREGKQRDPLEEGSYRCHVQHRATGQWYEMQDLSVKETMPQLIGVSESY 621
Query: 320 IQIYELRTT 328
+ I+E +
Sbjct: 622 LLIFERKGA 630
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 24/120 (20%)
Query: 1 ALCHVTPLRDYFLREINYARV--------------KRPPGDSSFL----------LVQRF 36
AL HV PLRDYFL N+ + +R G + L + F
Sbjct: 161 ALAHVRPLRDYFLLAPNFDELGGGAGEAPAGGGGKRRLAGQQQQVRRLAYSEFSPLARSF 220
Query: 37 GELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT 96
L+R +W+ FKS+V PH ++QAV S K++ Q++ +FL+W L+ LH G+
Sbjct: 221 SLLLRNMWSSHRFKSNVDPHMLVQAVSAASNKRYHVGRQAEAGEFLAWLLHQLHVGTGGS 280
>gi|50309163|ref|XP_454587.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643722|emb|CAG99674.1| KLLA0E14125p [Kluyveromyces lactis]
Length = 477
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 153/338 (45%), Gaps = 51/338 (15%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL HV P+RDYFL + + D L + L+RKLW+ + + ++SPHE+L
Sbjct: 175 ALAHVLPIRDYFLLGESSSGYNTDENDGPGL-IGSLSLLIRKLWSCKLLRRNISPHELLN 233
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKT---FLGSMKVKTR 117
+ L S+++F + DP FL W +++L K+ S+V F G +++ +
Sbjct: 234 YISLVSKRRFPVDDSRDPRSFLLWLISSL------CASKEPSLVRTVTDQFQGHVEITST 287
Query: 118 KIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
I V ++EK + E T ++ F L+ DLP LF + N + Q L T+
Sbjct: 288 PIETV-VDEKGKTMKFKKLEAATTTQKTKFWLLSLDLPQMNLFSNGNSANSVSQTKLETL 346
Query: 178 LTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKN-TFFVEKNPTIVNFPVKN 236
L KFN E+ EY T ++ +K + I P +LIL+ RF K T ++N T+V F
Sbjct: 347 LQKFNGET--EYHT--KDSIKTYRILKHPKFLILHFNRFDKGFTSIKDRNKTLVEFS--- 399
Query: 237 VDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG----------EPSNGTYR 286
K ++ Y L+ NI HD + ++
Sbjct: 400 ----------------------EKLEFSGVHYKLLVNITHDCVIQMKISDTEDLLASRWK 437
Query: 287 VHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
VHL +WYE D+ V + + + L E YIQI++
Sbjct: 438 VHLADTLRDQWYEFDDIEVNKVEKEFLFLKECYIQIWQ 475
>gi|406604319|emb|CCH44221.1| U4/U6.U5 tri-snRNP-associated protein [Wickerhamomyces ciferrii]
Length = 433
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 145/302 (48%), Gaps = 58/302 (19%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
L +RF L++KLW+ + FK+H+SPHE+LQ + + S K F EQ DP DFL WFLNTL++
Sbjct: 179 LNKRFIILVKKLWSSKLFKNHISPHELLQYISILSNKSFGINEQKDPKDFLIWFLNTLNK 238
Query: 92 ALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLT 151
K + SI+ K G + ++ +K P ++E+K+ T+ F L
Sbjct: 239 TF---KSDNDSILSKAIQGKILIQNQK-PG-------------SKEFKDITTK--FWLLN 279
Query: 152 CDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLIL 211
+LP P KD I QV L +L + + E+ + +++++I LP +LIL
Sbjct: 280 LELPTVPFLKDSKGIQQIQQVKLSKLLDVYKTQEEQLLSNGE---IRKYKILKLPKFLIL 336
Query: 212 YVKRFTKNTF-----FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYEST 266
RF E+N T+V FP ++ ++
Sbjct: 337 NFNRFKDQKLDLKLSLKERNQTLVEFP-------------------------LEMEFLGF 371
Query: 267 MYDLVANIVHDGEPSN----GTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQI 322
Y L++N+++ E + ++V L H W+EI+DL+V + + L+E YIQI
Sbjct: 372 KYKLISNVINQVETNQDHDKNQWKVQLRHH--DNWFEIEDLYVKTKEKEFLFLSETYIQI 429
Query: 323 YE 324
+E
Sbjct: 430 WE 431
>gi|67484272|ref|XP_657356.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Entamoeba histolytica HM-1:IMSS]
gi|56474587|gb|EAL51950.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Entamoeba histolytica HM-1:IMSS]
gi|449707548|gb|EMD47193.1| ubiquitin carboxylterminal hydrolase domain containing protein
[Entamoeba histolytica KU27]
Length = 444
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 151/333 (45%), Gaps = 57/333 (17%)
Query: 1 ALCHVTPLRDYFL--REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEM 58
++ H +R+ L EI K G+ L++R L+RK WN KS +SP+E+
Sbjct: 157 SIGHCKEIRNLLLSYEEIENISSKARCGE----LIKRVSMLIRKQWNSTIIKSVISPYEL 212
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ + RK F +Q D I+F +F+N L + + F G +++
Sbjct: 213 MSELSRL-RKNFSIEKQEDVIEFYMFFINALLP------------LTQCFQGQIQI---- 255
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTC---DLPPPPLFKDEVLENIIPQVNLY 175
E + + TC DLPP PL+ D++ E IIPQ+ L
Sbjct: 256 ---------------------EEDGKKSIKKCTCIPLDLPPMPLYPDQMKEKIIPQLLLK 294
Query: 176 TILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNF--- 232
IL K++ +++ T RF I +LP YL +KRF +NTF EKN T+V F
Sbjct: 295 DILKKYDGKTD----TLIGKRSVRFLIKTLPKYLTFVIKRFERNTFQGEKNITVVEFEDT 350
Query: 233 -PVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYH 291
+ + D + + K + Y ++ S Y LV+ I HDG +GTY LYH
Sbjct: 351 LDMSDYVVNDSIKQQTKFVFLLLFYKVLLCSLLS--YHLVSAIKHDGGIEDGTYSSFLYH 408
Query: 292 KGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+ + KW+EI + V + +I ++ + IYE
Sbjct: 409 QSLKKWFEINNEEVKEAFFPLIKVSAICLLIYE 441
>gi|254583656|ref|XP_002497396.1| ZYRO0F04554p [Zygosaccharomyces rouxii]
gi|238940289|emb|CAR28463.1| ZYRO0F04554p [Zygosaccharomyces rouxii]
Length = 459
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 155/329 (47%), Gaps = 50/329 (15%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L H+ PLRD+FL + +Y +VQR G ++RKLW+P+ FK +VS E L
Sbjct: 167 LSHIIPLRDHFLLQ-DYLEEDE--------IVQRLGIIIRKLWSPKLFKPYVSSEEFLAY 217
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
+ + ++ +DP W +N L + + S I+ +F G+++V T I P
Sbjct: 218 ISVVDPNIS--SKVNDPRQIFIWLVNNLIKK----SSELSRILSDSFQGNVQVVTIPIKP 271
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKF 181
V L+ K E E + PF LT DLPP PLFKD N +PQV + +L KF
Sbjct: 272 V-LDAKGDVVKFQRETAHEKHSTVPFWSLTLDLPPTPLFKDNRNANDLPQVRIEELLKKF 330
Query: 182 NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD 241
+ + E+++ L+++++ LP YLIL+ RF K KNP
Sbjct: 331 DGKQEQQFAQG----LRKYKLIRLPRYLILHFNRFDK------KNPLT------------ 368
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD-------GEPSNGTYRVHLYHKGI 294
VK + ++ + K +++++ Y LVAN+VHD +R+ L +
Sbjct: 369 -----VKGRNQTLVEFSQKIEFQNSRYTLVANVVHDTIGTTAFDNDDKSVWRIQLLNPTN 423
Query: 295 GKWYEIQDLHVTDILPQMITLTEAYIQIY 323
+W E+ +++ L E Y+Q++
Sbjct: 424 DQWVELDGTLNRLKERELLFLQETYMQVW 452
>gi|167388869|ref|XP_001738726.1| pre-mRNA-splicing factor SAD1 [Entamoeba dispar SAW760]
gi|165897895|gb|EDR24939.1| pre-mRNA-splicing factor SAD1, putative [Entamoeba dispar SAW760]
Length = 427
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 151/326 (46%), Gaps = 60/326 (18%)
Query: 1 ALCHVTPLRDYFL--REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEM 58
++ H +R+ L EI K G+ L++R L+RK WNP KS +SP+E+
Sbjct: 157 SIGHCKEIRNLLLSYEEIEKISSKARCGE----LIKRVSMLIRKQWNPTLIKSVISPYEL 212
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ + +K F +Q D I+F +F+N L + ++F G ++++ K
Sbjct: 213 MSELNRL-KKSFSIEKQEDLIEFYMFFINALLP------------LTQSFQGQIQIEEGK 259
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
++Y + P DLPP PL+ D++ E IIPQ+ L IL
Sbjct: 260 -----------------KKYIKHCICIPL-----DLPPMPLYPDQMKEKIIPQLLLKDIL 297
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
K++ ++E +L I LP YL +KRF +NTF +KN T+V F +D
Sbjct: 298 KKYDGKTETLIGKRSVKYL----IKKLPKYLTFVIKRFERNTFQGDKNITVVEFE-DTLD 352
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWY 298
D + D +K + T Y LV+ I HDG +GTY LYH+ + KW+
Sbjct: 353 MSDYVVN-----------DSIK---QQTNYHLVSAIKHDGGIEDGTYSSFLYHQSLKKWF 398
Query: 299 EIQDLHVTDILPQMITLTEAYIQIYE 324
EI + V + +I ++ + IYE
Sbjct: 399 EINNEEVKEAFFPLIKVSAICLLIYE 424
>gi|70934810|ref|XP_738578.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein
[Plasmodium chabaudi chabaudi]
gi|56514911|emb|CAH78953.1| Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger protein,
putative [Plasmodium chabaudi chabaudi]
Length = 124
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 77/127 (60%), Gaps = 20/127 (15%)
Query: 202 ITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKA 261
I+ LP YLI ++RF+KN FF EKN TIVNF +KN+D M D V
Sbjct: 3 ISKLPKYLIFTIQRFSKNNFFTEKNGTIVNFVIKNLD----------------MKDYVHQ 46
Query: 262 KYES----TMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
Y T Y+LVANI H G +NG+Y++H+ + +WYEI+DLHV ILPQ++ L E
Sbjct: 47 DYLDQNPVTKYNLVANIFHSGTVTNGSYKIHVLQQATNEWYEIEDLHVISILPQLVLLPE 106
Query: 318 AYIQIYE 324
+ IQ+Y+
Sbjct: 107 SCIQLYQ 113
>gi|359497851|ref|XP_002272213.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like, partial
[Vitis vinifera]
Length = 172
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 105/173 (60%), Gaps = 13/173 (7%)
Query: 66 SRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELE 125
S+K+F+ QSDP++F+SW LNTLH L T KK+SSI+Y F G ++V ++IP
Sbjct: 4 SKKRFRIGAQSDPVEFMSWLLNTLHGDLR-TSKKNSSIIYNCFQGELEV-VKEIPNKGFF 61
Query: 126 EKVRQRLLLTEEYKETETESPFLYLTCDLP---------PPPLFKDEVLENIIPQVNLYT 176
EK R+ + + + + TC +P PPPLFKD + +NIIPQV L+
Sbjct: 62 EK-RENGDDQNKATTADEHADVILETCRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFN 120
Query: 177 ILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
IL KF+ E E + + R+ +T LP YLIL+++RFTKN FF+EKNPT+
Sbjct: 121 ILKKFDGELVTEVVRPRIARM-RYRVTRLPQYLILHMRRFTKNNFFIEKNPTL 172
>gi|302309338|ref|NP_986672.2| AGR007Cp [Ashbya gossypii ATCC 10895]
gi|299788311|gb|AAS54496.2| AGR007Cp [Ashbya gossypii ATCC 10895]
Length = 498
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 157/335 (46%), Gaps = 52/335 (15%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L H+ P+RD FL + P + + L+R +W+P F+ HVSPHE LQ
Sbjct: 199 LAHIKPVRDLFLLNDDLLERADP-------FINKLALLIRHIWSPNLFRRHVSPHEFLQY 251
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
V + SDP +F+ + +N + ++ G +K + G++ ++T KI P
Sbjct: 252 VATHLAQPSSMKAYSDPRNFMLFVINRMLKSSCGEVRK---TLTDNIQGTVTIRTTKIVP 308
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKF 181
V ++ + +L ++ T+ F L+ DLPP PLFKD N +PQV L ++ KF
Sbjct: 309 VPNDDGSAIKFVLDTRTAKS-TDVMFWMLSLDLPPRPLFKDGKSANSLPQVKLEELMGKF 367
Query: 182 NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFV-EKNPTIVNFPVKNVDFG 240
+ E+ K +K +++ P YL+L++KRF F V E+N T+ V+FG
Sbjct: 368 DGTVEQHLKES----VKLNKVSRCPRYLVLHLKRFEPGKFPVQERNQTV-------VEFG 416
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG-EPSN----------GTYRVHL 289
L ++ S + L+ N+VH+ +P+ +++ +
Sbjct: 417 QEL------------------EFRSVKFRLLMNVVHEATKPAKNQEVPILDEISNWKIQI 458
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+ W+E+ + +V +++ L E Y+Q++E
Sbjct: 459 RNDKDDTWFELDEGNVRKREKELLFLNETYLQVWE 493
>gi|374109923|gb|AEY98828.1| FAGR007Cp [Ashbya gossypii FDAG1]
Length = 498
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 156/335 (46%), Gaps = 52/335 (15%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L H+ P+RD FL + P + + L+R +W+P F+ HVSPHE LQ
Sbjct: 199 LAHIKPVRDLFLLNDDLLERADP-------FINKLALLIRHIWSPNLFRRHVSPHEFLQY 251
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
V + SDP +F+ + +N + ++ G +K + G++ ++T KI P
Sbjct: 252 VATHLAQPSSMKAYSDPRNFMLFVINRMLKSSCGEVRK---TLTDNIQGTVTIRTTKIVP 308
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKF 181
++ + +L ++ T+ F L+ DLPP PLFKD N +PQV L ++ KF
Sbjct: 309 APNDDGSAIKFVLDTRTAKS-TDVMFWMLSLDLPPRPLFKDGKSANSLPQVKLEELMGKF 367
Query: 182 NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFV-EKNPTIVNFPVKNVDFG 240
+ E+ K +K +++ P YL+L++KRF F V E+N T+ V+FG
Sbjct: 368 DGTVEQHLKES----VKLNKVSRCPRYLVLHLKRFEPGKFPVQERNQTV-------VEFG 416
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG-EPSN----------GTYRVHL 289
L ++ S + L+ N+VH+ +P+ +++ +
Sbjct: 417 QEL------------------EFRSVKFRLLMNVVHEATKPAKNQEVPILDEISNWKIQI 458
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+ W+E+ + +V +++ L E Y+Q++E
Sbjct: 459 RNDKDDTWFELDEGNVRKREKELLFLNETYLQVWE 493
>gi|412988066|emb|CCO19462.1| U4/U6.U5 tri-snRNP-associated protein 2 [Bathycoccus prasinos]
Length = 492
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 150/337 (44%), Gaps = 80/337 (23%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLV-QRFGELMRKLWNPRNFKSHVSPHEML 59
+L V LR +FL A + R G+++ L +++WN NF+ H SP +
Sbjct: 228 SLARVEKLRAHFLS----ASLIRSDGNNNNKNENDTLQSLCQRIWNKHNFRGHTSPDSFV 283
Query: 60 QAVVLWSRKQFQFTE----QSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVK 115
+ + RKQ + ++D + + TL L TF+
Sbjct: 284 RKL----RKQIKLAHPEKLETDIDNLFNDPFATLRHFL-------------TFV------ 320
Query: 116 TRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLY 175
+P ++E R LL+ + +T+ PF+++ LP PLF+D + +N IPQV L
Sbjct: 321 ---VPKKYVDELFRGELLMLNQKNKTQ---PFVFVPLKLPDAPLFRDVMEKNAIPQVALA 374
Query: 176 TILTKFNNESEKEYKTYKENFLKRFEITSLPPYLIL-YVKRFTKNTFF--VEKNPTIVNF 232
+L K F + + P YLIL +V RF+KN F V KNPTIV F
Sbjct: 375 ELL-------------------KPFALKTAPEYLILAFVNRFSKNQFTKEVSKNPTIVTF 415
Query: 233 PVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHK 292
PVKN+ K +++ + YDL+AN+ G+ + + H
Sbjct: 416 PVKNL------------KIQASSAAGSNSNSNPFSYDLLANVDSAGKAT-------VKHV 456
Query: 293 GIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTP 329
G WYE DL V ++L Q +TL E Y+QIY+ +P
Sbjct: 457 D-GNWYETNDLFVNEVLAQQVTLGETYVQIYKRVASP 492
>gi|327533544|pdb|2Y6E|A Chain A, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533545|pdb|2Y6E|B Chain B, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533546|pdb|2Y6E|C Chain C, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533547|pdb|2Y6E|D Chain D, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533548|pdb|2Y6E|E Chain E, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533549|pdb|2Y6E|F Chain F, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
Length = 367
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 154/354 (43%), Gaps = 49/354 (13%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 26 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAP-RMF 82
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD-----------SSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 83 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 142
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLEN- 167
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 143 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVMEGP 199
Query: 168 -IIPQ------------VNLYTILTKFNNESEKEYKTYK--ENFLKRFEITSLPPYLILY 212
+ PQ + L+T + K + K+F++ SLP L+++
Sbjct: 200 MLQPQKKKKTTVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVH 259
Query: 213 VKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVA 272
+KRF+ N ++ +K T+V FP++ ++ + + Y +YDL+A
Sbjct: 260 LKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPY---------------VYDLIA 304
Query: 273 NIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
H G G Y + +K GKWY D +V+ I AY+ Y+ R
Sbjct: 305 VSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRR 358
>gi|344302364|gb|EGW32669.1| hypothetical protein SPAPADRAFT_61740 [Spathaspora passalidarum
NRRL Y-27907]
Length = 400
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 119/239 (49%), Gaps = 29/239 (12%)
Query: 1 ALCHVTPLRDYFL---REINYARVKR--PPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
L H+ P+RD++L + +Y + R P D LLV RK+W+P FKSH++P
Sbjct: 143 CLAHIEPIRDFYLLLPKHKHYETITRKSPINDKLSLLV-------RKIWSPHLFKSHIAP 195
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVK 115
HE++ + S K+F + P +FL W +NTLH L T K + + G +++
Sbjct: 196 HELINCISEISNKKFTIEHEQPPKNFLIWLVNTLHSQLVKTTKSKHTTFSQNLQGKIEIT 255
Query: 116 TRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLY 175
T IP + E K R T E K ES F L+ D+P PL ++ + I +V +
Sbjct: 256 T--IPIISQEVKSRVE-FTTIESKSKTVESKFWLLSLDIPHNPLLTAQL--DKIEEVEIE 310
Query: 176 TILTKFNNESEKEYKTYKENFLKRFEITS-LPPYLILYVKRFTKNTFFVEKNPTIVNFP 233
+L K+N ++ + EN ++ +++ LPPYLI+ +F N T+V FP
Sbjct: 311 ALLEKYNGTTQTQ---VNENEVRTYKVLEPLPPYLII--------SFEKTSNSTVVKFP 358
>gi|444317463|ref|XP_004179388.1| hypothetical protein TBLA_0C00530 [Tetrapisispora blattae CBS 6284]
gi|387512429|emb|CCH59869.1| hypothetical protein TBLA_0C00530 [Tetrapisispora blattae CBS 6284]
Length = 483
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 158/350 (45%), Gaps = 57/350 (16%)
Query: 1 ALCHVTPLRDYFL-REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
A H+TP+RDYFL ++ + + + P L + G L+RK+W+P+ K H+SP+E++
Sbjct: 167 AFAHITPIRDYFLLKKDDVGDILKSPN-----LENKLGLLIRKIWSPQLAKPHISPNELI 221
Query: 60 QAVVLWSRKQFQFT--EQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTR 117
+ + + + T +Q+ P+ + FL TL L+ T +I+++ G + +K+
Sbjct: 222 DYLNIHQKSNNESTPSQQTVPLKNPTTFLLTLIHQLSKTSNNLKTILFENLQGKIDIKSS 281
Query: 118 K-IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYT 176
+ +++ V + K +PF L +LP P+ K + + IP+V L T
Sbjct: 282 STVTKNIIDQPVDDESKKKIKAKNKIVHTPFWLLKLELPSMPILKKGLKADDIPRVKLGT 341
Query: 177 ILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRF--------TKNTFFV-EKNP 227
+L+K+N N L+ ++ SLP YLI+ RF KN F V +N
Sbjct: 342 LLSKYNGTVSTHAAG---NQLRSLKLKSLPNYLIIQYDRFKNNLHVNGIKNGFSVRNRNQ 398
Query: 228 TIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP------- 280
T++++P +K K + Y L+ NI+H
Sbjct: 399 TLIDYP-------------------------MKMKLLNREYQLIMNIIHKSSSIPALNNV 433
Query: 281 ----SNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
++ + + + +W+EI + V+ Q++ L E ++QI+ +
Sbjct: 434 NDIDDTSSWLIQINDETTDEWWEINERSVSRKEKQLLFLGEVFLQIWRAK 483
>gi|401839190|gb|EJT42510.1| SAD1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 448
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 153/337 (45%), Gaps = 73/337 (21%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
+ H+ PLRD FL +N+ D+ ++R ++K+W+P+ FK H+S ++ +
Sbjct: 168 ISHIAPLRDCFL--LNHF-------DNEGEFIKRLSICIKKIWSPKLFKHHLSVNDFVTY 218
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
+ + +F DP FL W LN + + K+ SI+ ++ G +K I
Sbjct: 219 LKVKEGLDLRFI---DPRFFLLWLLN----KICSSSKQLKSILNQSCKGKVK-----ITK 266
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKF 181
+E E + ++ K PF LT DLP FKD +PQVN+ +LTKF
Sbjct: 267 IENETEENGPIISKVNVK------PFWVLTLDLPEFSPFKDGNTVENLPQVNIIQLLTKF 320
Query: 182 NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTF--FVEKNPTIVNFPVKNVDF 239
+N +TY + L FE+T LP +LI + RF +++ +N TIV F
Sbjct: 321 SNR-----QTYYADTL--FELTRLPQFLIFHFNRFDRSSEHPVKNRNQTIVEF------- 366
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH--------DGEPSNGTYRVH--- 288
S+ +L+ AKY L N+VH DG NG R H
Sbjct: 367 -------------SSELELLHAKYR-----LKTNVVHVVIKASSTDGNAFNGDERSHWIT 408
Query: 289 -LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
LY KW E+ L+ T+ +++ L E +IQ++E
Sbjct: 409 QLYDDKNEKWIEVDGLNTTEREAELLFLNETFIQVWE 445
>gi|255710529|ref|XP_002551548.1| KLTH0A02046p [Lachancea thermotolerans]
gi|238932925|emb|CAR21106.1| KLTH0A02046p [Lachancea thermotolerans CBS 6340]
Length = 470
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 154/336 (45%), Gaps = 44/336 (13%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
+ H+TP+RD+FL E + +++ L++R L++KLW+P K+H+SP+E+LQ
Sbjct: 172 MAHITPIRDFFLLE-SQSKIDDE-------LIKRLALLIKKLWSPHILKAHLSPYELLQQ 223
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
+ ++ DP F+ W +N + + KK ++ + G +V+ R I
Sbjct: 224 LSRVNKNVNSDNRIKDPKSFMLWLINYMIAKAHPLKK----VLTRNMRG--EVEVRSIVV 277
Query: 122 VELEEKVRQRL-LLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
E + L +E +T F LT DLPP LF + N IPQV L ++L K
Sbjct: 278 REKGTTGEKNLEFFEDEATKTIVLPKFWSLTLDLPPVSLFNEGSDTNSIPQVTLDSLLGK 337
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKN---- 236
F+ K +K+++I P +L + RF + P++N
Sbjct: 338 FSGHK----KIPTREGMKQYKIVKYPRFLAINFDRFNWDA----------AMPIRNRNRT 383
Query: 237 -VDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSN-GTYRVHLYHKGI 294
V F D L ++E+ Y L+ T+Y + + D + + +++ L +
Sbjct: 384 LVKFADAL------RFENKDYRLIA---NVTLYPVGHSRSGDEDVDDEARWKIQLSNPKN 434
Query: 295 GKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
+W+EI +VT +++ L E YIQ++E+ S
Sbjct: 435 AEWFEIDGKNVTAKEKELLFLDEVYIQVWEMEQNKS 470
>gi|365760941|gb|EHN02623.1| Sad1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 448
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 152/337 (45%), Gaps = 73/337 (21%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
+ H+ PLRD FL +N+ D+ ++R ++K+W+P+ FK H+S ++ +
Sbjct: 168 ISHIAPLRDCFL--LNHF-------DNEGEFIKRLSTCIKKIWSPKLFKHHLSVNDFVTY 218
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
+ + +F DP FL W LN + + K+ SI+ ++ G +K I
Sbjct: 219 LKVKEGLDLRFI---DPRFFLLWLLN----KICSSSKQLKSILNQSCKGKVK-----ITK 266
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKF 181
+E E + ++ K PF LT DLP FKD +PQVN+ +LTKF
Sbjct: 267 IENETEENGPIISKVNVK------PFWVLTLDLPEFSPFKDGNTVENLPQVNIIQLLTKF 320
Query: 182 NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTF--FVEKNPTIVNFPVKNVDF 239
+N +TY + L FE+T LP +LI + RF +++ +N T+V F
Sbjct: 321 SNR-----QTYYADTL--FELTRLPQFLIFHFNRFDRSSEHPVKNRNQTVVEF------- 366
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH--------DGEPSNGTYRVH--- 288
S +++ AKY L N+VH DG NG R H
Sbjct: 367 -------------SNELEILHAKYR-----LKTNVVHVVIKASSTDGNAFNGDERSHWIT 408
Query: 289 -LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
LY KW E+ L+ T+ +++ L E +IQ++E
Sbjct: 409 QLYDDKDEKWIEVDGLNTTEREAELLFLNETFIQVWE 445
>gi|281212512|gb|EFA86672.1| SAP DNA-binding domain-containing protein [Polysphondylium pallidum
PN500]
Length = 494
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 66/97 (68%), Gaps = 12/97 (12%)
Query: 224 EKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNG 283
EK PTIVNFP+KN+D D L+P+V L K ST Y+L++NI H+GEP G
Sbjct: 384 EKEPTIVNFPLKNLDLKDYLSPDV----------LKTCK--STKYNLLSNIKHEGEPDAG 431
Query: 284 TYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYI 320
Y V+L++KG KW+EIQDL V + LPQ++ ++EAY+
Sbjct: 432 NYTVYLHNKGFDKWFEIQDLTVKETLPQLVAVSEAYL 468
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 74/121 (61%), Gaps = 15/121 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+L V+ +R+YF+ + N K LV FGEL+RK+WNPRNFK HVSPHE+++
Sbjct: 242 SLARVSMIRNYFINQDNLKNCKSA-------LVNNFGELLRKIWNPRNFKGHVSPHELIR 294
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLH---RALNGTKKK----DSSIVYKTFLGSMK 113
VV + +F + +SDP++FL WFLN+L +NG K +S+I+ + F G ++
Sbjct: 295 -VVQSASTRFTISNESDPLEFLQWFLNSLSYDLNVMNGVDTKQQNSNSNIIQQAFSGEIQ 353
Query: 114 V 114
+
Sbjct: 354 L 354
>gi|156843267|ref|XP_001644702.1| hypothetical protein Kpol_1056p45 [Vanderwaltozyma polyspora DSM
70294]
gi|156115350|gb|EDO16844.1| hypothetical protein Kpol_1056p45 [Vanderwaltozyma polyspora DSM
70294]
Length = 451
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 153/336 (45%), Gaps = 71/336 (21%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L H+ P+RD+FL + + SF+ + ++RKLW+ + FKSH+S E
Sbjct: 169 LAHIEPIRDWFL-------LNEIDSEESFM--KNIKLIIRKLWSTKLFKSHISADEFFAF 219
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
+ + + F+ Q DP FL +N++ ++ ++ I+ + LG + + T I
Sbjct: 220 LSI--HENFEKMIQ-DPKIFLLKIINSIIKS----SQELGLILKEQLLGKVSISTSAISG 272
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKF 181
E +SPF LT DLP +F++ + N +PQV L +L KF
Sbjct: 273 -------------KEANSNKVVKSPFWLLTLDLPTQTVFRNALEVNDLPQVKLGELLIKF 319
Query: 182 NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFT--KNTFFVEKNPTIVNFPVKNVDF 239
N + EY T +K+++I LP YLIL+ RF + T ++N T+V FP
Sbjct: 320 NGIN--EYPTL--GGVKKYKILKLPRYLILHFNRFDNKEKTPVKDRNQTLVEFP------ 369
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD-----------GEPSNGTYRVH 288
T+ +L K KY+ L+ANI+H+ E ++
Sbjct: 370 --------------TLMELQKTKYQ-----LIANIIHEPLHELSVDNTSNEDLQSKWKAQ 410
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
L ++ +WYEI V +++ L+E Y+Q+++
Sbjct: 411 LLNEKDEQWYEIDGTEVKIKERELLFLSETYLQVWK 446
>gi|365765846|gb|EHN07351.1| Sad1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 448
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 153/338 (45%), Gaps = 75/338 (22%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
+ H+ P+RD+FL +N+ D+ ++R ++K+W+P+ FK H+S + L
Sbjct: 168 ISHMVPVRDHFL--LNHF-------DNQGEFIKRLSICVKKIWSPKLFKXHLSVDDFLSY 218
Query: 62 VVLWSRKQFQFTEQSDPID---FLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ + R+ +PID FL W N + + N K SI+ + G +K+ +
Sbjct: 219 LKV--REGLNL----NPIDPRLFLLWLFNKICXSSNELK----SILNHSCKGKVKIAKVE 268
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
P E E V ++++ PF LT DLP F+D + +PQ+N+ +L
Sbjct: 269 SKP-EASESVTGKVIV----------KPFWVLTLDLPEFSPFEDGNSVDDLPQINITKLL 317
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
TKF T FE+T LP +LI + RF +N+ + PVKN +
Sbjct: 318 TKFTKSRSSSTSTV-------FELTRLPQFLIFHFNRFDRNS----------DHPVKNRN 360
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH--------DGEPSNGTYRVH-- 288
+ ++ S + +++ KY L AN+VH DG NG + H
Sbjct: 361 -------QTLVEFSSEL-EILHVKYR-----LKANVVHVVIKQPSTDGNAFNGDEKSHWI 407
Query: 289 --LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
LY KW EI ++ T+ +++ L E +IQ++E
Sbjct: 408 TQLYDNKSEKWIEIDGINTTEREAELLFLKETFIQVWE 445
>gi|190406577|gb|EDV09844.1| hypothetical protein SCRG_05551 [Saccharomyces cerevisiae RM11-1a]
gi|256268857|gb|EEU04209.1| Sad1p [Saccharomyces cerevisiae JAY291]
gi|259146195|emb|CAY79454.1| Sad1p [Saccharomyces cerevisiae EC1118]
gi|323337778|gb|EGA79021.1| Sad1p [Saccharomyces cerevisiae Vin13]
gi|323355182|gb|EGA87009.1| Sad1p [Saccharomyces cerevisiae VL3]
Length = 448
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 153/338 (45%), Gaps = 75/338 (22%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
+ H+ P+RD+FL +N+ D+ ++R ++K+W+P+ FK H+S + L
Sbjct: 168 ISHMVPVRDHFL--LNHF-------DNQGEFIKRLSICVKKIWSPKLFKHHLSVDDFLSY 218
Query: 62 VVLWSRKQFQFTEQSDPID---FLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ + R+ +PID FL W N + + N K SI+ + G +K+ +
Sbjct: 219 LKV--REGLNL----NPIDPRLFLLWLFNKICLSSNELK----SILNHSCKGKVKIAKVE 268
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
P E E V ++++ PF LT DLP F+D + +PQ+N+ +L
Sbjct: 269 SKP-EASESVTGKVIV----------KPFWVLTLDLPEFSPFEDGNSVDDLPQINITKLL 317
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
TKF T FE+T LP +LI + RF +N+ + PVKN +
Sbjct: 318 TKFTKSRSSSTSTV-------FELTRLPQFLIFHFNRFDRNS----------DHPVKNRN 360
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH--------DGEPSNGTYRVH-- 288
+ ++ S + +++ KY L AN+VH DG NG + H
Sbjct: 361 -------QTLVEFSSEL-EILHVKYR-----LKANVVHVVIKQPSTDGNAFNGDEKSHWI 407
Query: 289 --LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
LY KW EI ++ T+ +++ L E +IQ++E
Sbjct: 408 TQLYDNKSEKWIEIDGINTTEREAELLFLKETFIQVWE 445
>gi|14318527|ref|NP_116660.1| Sad1p [Saccharomyces cerevisiae S288c]
gi|1175976|sp|P43589.1|SAD1_YEAST RecName: Full=Pre-mRNA-splicing factor SAD1; AltName: Full=snRNP
assembly-defective protein 1
gi|836760|dbj|BAA09244.1| unnamed protein product [Saccharomyces cerevisiae]
gi|51012983|gb|AAT92785.1| YFR005C [Saccharomyces cerevisiae]
gi|285811900|tpg|DAA12445.1| TPA: Sad1p [Saccharomyces cerevisiae S288c]
gi|349577920|dbj|GAA23087.1| K7_Sad1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 448
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 153/338 (45%), Gaps = 75/338 (22%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
+ H+ P+RD+FL +N+ D+ ++R ++K+W+P+ FK H+S + +
Sbjct: 168 ISHMVPVRDHFL--LNHF-------DNQGEFIKRLSICVKKIWSPKLFKHHLSVDDFVSY 218
Query: 62 VVLWSRKQFQFTEQSDPID---FLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ + R+ +PID FL W N + + N K SI+ + G +K+ +
Sbjct: 219 LKV--REGLNL----NPIDPRLFLLWLFNKICSSSNDLK----SILNHSCKGKVKIAKVE 268
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
P E E V ++++ PF LT DLP F+D + +PQ+N+ +L
Sbjct: 269 NKP-EASESVTGKVIV----------KPFWVLTLDLPEFSPFEDGNSVDDLPQINITKLL 317
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
TKF T FE+T LP +LI + RF +N+ + PVKN +
Sbjct: 318 TKFTKSRSSSTSTV-------FELTRLPQFLIFHFNRFDRNS----------DHPVKNRN 360
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH--------DGEPSNGTYRVH-- 288
+ ++ S + +++ KY L AN+VH DG NG + H
Sbjct: 361 -------QTLVEFSSEL-EILHVKYR-----LKANVVHVVIKQPSTDGNAFNGDEKSHWI 407
Query: 289 --LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
LY KW EI ++ T+ +++ L E +IQ++E
Sbjct: 408 TQLYDNKSEKWIEIDGINTTEREAELLFLKETFIQVWE 445
>gi|207345663|gb|EDZ72415.1| YFR005Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 393
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 153/338 (45%), Gaps = 75/338 (22%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
+ H+ P+RD+FL +N+ D+ ++R ++K+W+P+ FK H+S + L
Sbjct: 113 ISHMVPVRDHFL--LNHF-------DNQGEFIKRLSICVKKIWSPKLFKHHLSVDDFLSY 163
Query: 62 VVLWSRKQFQFTEQSDPID---FLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ + R+ +PID FL W N + + N K SI+ + G +K+ +
Sbjct: 164 LKV--REGLNL----NPIDPRLFLLWLFNKICSSSNELK----SILNYSCKGKVKIAKVE 213
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
P E E V ++++ PF LT DLP F+D + +PQ+N+ +L
Sbjct: 214 SKP-EASESVTGKVIV----------KPFWVLTLDLPEFSPFEDGNSVDDLPQINITKLL 262
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
TKF T FE+T LP +LI + RF +N+ + PVKN +
Sbjct: 263 TKFTKSRSSSTSTV-------FELTRLPQFLIFHFNRFDRNS----------DHPVKNRN 305
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH--------DGEPSNGTYRVH-- 288
+ ++ S + +++ KY L AN+VH DG NG + H
Sbjct: 306 -------QTLVEFSSEL-EILHVKYR-----LKANVVHVVIKQPSTDGNAFNGDEKSHWI 352
Query: 289 --LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
LY KW EI ++ T+ +++ L E +IQ++E
Sbjct: 353 TQLYDNKSEKWIEIDGINTTEREAELLFLKETFIQVWE 390
>gi|151940767|gb|EDN59154.1| conserved zinc-finger domain protein involved in pre-mRNA splicing
[Saccharomyces cerevisiae YJM789]
gi|392299676|gb|EIW10769.1| Sad1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 448
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 153/338 (45%), Gaps = 75/338 (22%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
+ H+ P+RD+FL +N+ D+ ++R ++K+W+P+ FK H+S + +
Sbjct: 168 ISHMVPVRDHFL--LNHF-------DNQGEFIKRLSICVKKIWSPKLFKHHLSVDDFVSY 218
Query: 62 VVLWSRKQFQFTEQSDPID---FLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ + R+ +PID FL W N + + N K SI+ + G +K+ +
Sbjct: 219 LKV--REGLNL----NPIDPRLFLLWLFNKICSSSNELK----SILNHSCKGKVKIAKVE 268
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
P E E V ++++ PF LT DLP F+D + +PQ+N+ +L
Sbjct: 269 SKP-EASESVTGKVIV----------KPFWVLTLDLPEFSPFEDGNSVDDLPQINITKLL 317
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
TKF T FE+T LP +LI + RF +N+ + PVKN +
Sbjct: 318 TKFTKSRSSSTSTV-------FELTRLPQFLIFHFNRFDRNS----------DHPVKNRN 360
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH--------DGEPSNGTYRVH-- 288
+ ++ S + +++ KY L AN+VH DG NG + H
Sbjct: 361 -------QTLVEFSSEL-EILHVKYR-----LKANVVHVVIKQPSTDGNAFNGDEKSHWI 407
Query: 289 --LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
LY KW EI ++ T+ +++ L E +IQ++E
Sbjct: 408 TQLYDNKSEKWIEIDGINTTEREAELLFLKETFIQVWE 445
>gi|348505611|ref|XP_003440354.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Oreochromis
niloticus]
Length = 623
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 145/339 (42%), Gaps = 50/339 (14%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD+S LV+ F + + LW + ++ SP + A+ W F+ +Q D +F
Sbjct: 210 RSQGDNSVSLVEEFRKTLCSLW--QGNQTAFSPDSLFYAI--WKIMPSFRGYQQQDAHEF 265
Query: 82 LSWFLNTLHRAL----NGTKK--------KDSSIVYKTFL-GSMKVKTRKIPPVELEEKV 128
+ + L+ LHR L NG + SS K G+ V T + L+ +V
Sbjct: 266 MRYLLDHLHRELQYSRNGASHPLSPQDGVRLSSTDGKCCTNGTASVVTSIFGGI-LQNEV 324
Query: 129 RQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKE 188
+ TE K PFL L+ D+P K + +P L L F + E +
Sbjct: 325 NCLICGTESRKF----DPFLDLSLDIPSQFRQKRNKDQEPVPTCTLRDCLHSFTDLEELD 380
Query: 189 ----YKTYK----ENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF- 239
Y +K + K+F I LP L L++KRF F K T V FP+K +D
Sbjct: 381 DTELYYCHKCKKRQKSTKKFWIQKLPKVLCLHLKRFHWTAFLRNKVDTYVEFPLKGLDMR 440
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWY 298
G +L PE K+ S +YDLVA +VH G +G Y + H+ G+WY
Sbjct: 441 GYLLEPE-------------KSLPGSCLYDLVAVVVHHGSGVGSGHYTAYGSHE--GRWY 485
Query: 299 EIQDLHVTDILPQMITLTEAYIQIYELRT--TPSPTAMS 335
D VT + +AYI Y RT PS T+ S
Sbjct: 486 HFNDSTVTLTNEDTVRKAKAYILFYVERTGQVPSDTSAS 524
>gi|255728995|ref|XP_002549423.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240133739|gb|EER33295.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 400
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 149/329 (45%), Gaps = 81/329 (24%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL H+ P+RDY+L+ P G+S L +FGEL+RK+W+P FKSH+SP +
Sbjct: 147 ALAHIKPIRDYYLQ--------LPNGNS---LNAKFGELVRKIWSPHLFKSHISPQGFIT 195
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+ S+++F TE+ P FL W LN L ++ G +++ + I
Sbjct: 196 TISEESKRKFT-TEKGTPKAFLLWILNKLDGP------------FQCLRGKIEITSTPIV 242
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P E +KV +T E K TES F L+ D+P + I +++L +L K
Sbjct: 243 PHEGNDKVE---FVTLESKRKTTESNFWILSVDVPSSSF---NSHGDKIEELHLEDLLLK 296
Query: 181 FNNESE----KEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKN 236
++ E+ K+ +TYK +T LP YLI+ +R +K + V K P ++ F K
Sbjct: 297 YDGETTTQGPKDIRTYK--------VTKLPQYLIISYER-SKESKAVVKFPEVLEFYGKK 347
Query: 237 VDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGK 296
Y+LV++I T+ + L+ + +
Sbjct: 348 -------------------------------YELVSSI-----RKKETWSITLHAQQ--E 369
Query: 297 WYEIQDLHVTDILPQMITLTEAYIQIYEL 325
W I +L V + +++ L E YIQ++ L
Sbjct: 370 WILIHNLEVKTVSSELLFLDENYIQVWNL 398
>gi|238491730|ref|XP_002377102.1| snRNP assembly factor, putative [Aspergillus flavus NRRL3357]
gi|220697515|gb|EED53856.1| snRNP assembly factor, putative [Aspergillus flavus NRRL3357]
Length = 509
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 122/287 (42%), Gaps = 66/287 (22%)
Query: 95 GTKKKD---SSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLT 151
G+KK +S+V F G ++++++ I + RL+ TE +PFL LT
Sbjct: 227 GSKKPSKTPTSVVQAAFQGHLRIESQAI--TAHSDTQNARLVFTESGDIKSQTTPFLILT 284
Query: 152 CDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLIL 211
DLPP PLF+ E+IIP V L T+L K+N + E ++ ++ + LPPYL+
Sbjct: 285 LDLPPTPLFQSANRESIIPHVPLTTLLNKYNGITASEKLAHR---VRHRLLHPLPPYLLF 341
Query: 212 YVKRFTKNTFFVEKNPTIVNFPV-KNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDL 270
++KRF+KN F E+NPTIV FP +++D + P + E +YDL
Sbjct: 342 HIKRFSKNRFVSERNPTIVTFPSPRSLDMSPYVEPNPD----------IWPPGEPILYDL 391
Query: 271 VANIV--------------------------------------------HDGEPSNGTYR 286
VANI+ HD S R
Sbjct: 392 VANIILDPTVAVPGATDEAAADKGVNAASGASSSGAGAGSEKVSWMVQLHDKAMSAENNR 451
Query: 287 VHLYHKGIGK---WYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
H G + W EIQDL V + + E Y+ ++E R P
Sbjct: 452 QHSERAGEQQGPEWLEIQDLFVKKAETETLFTREGYLMVWERRKVPG 498
>gi|323333728|gb|EGA75120.1| Sad1p [Saccharomyces cerevisiae AWRI796]
Length = 346
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 151/336 (44%), Gaps = 75/336 (22%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
+ H+ P+RD+FL +N+ D+ ++R ++K+W+P+ FK H+S + L
Sbjct: 71 ISHMVPVRDHFL--LNHF-------DNQGEFIKRLSICVKKIWSPKLFKHHLSVDDFLSY 121
Query: 62 VVLWSRKQFQFTEQSDPID---FLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ + R+ +PID FL W N + + N K SI+ + G +K+ +
Sbjct: 122 LKV--REGLNL----NPIDPRLFLLWLFNKICLSSNELK----SILNHSCKGKVKIAKVE 171
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
P E E V ++++ PF LT DLP F+D + +PQ+N+ +L
Sbjct: 172 SKP-EASESVTGKVIV----------KPFWVLTLDLPEFSPFEDGNSVDDLPQINITKLL 220
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
TKF T FE+T LP +LI + RF +N+ + PVKN +
Sbjct: 221 TKFTKSRSSSTSTV-------FELTRLPQFLIFHFNRFDRNS----------DHPVKNRN 263
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH--------DGEPSNGTYRVH-- 288
+ ++ S + +++ KY L AN+VH DG NG + H
Sbjct: 264 -------QTLVEFSSEL-EILHVKYR-----LKANVVHVVIKQPSTDGNAFNGDEKSHWI 310
Query: 289 --LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQI 322
LY KW EI ++ T+ +++ L E +IQ+
Sbjct: 311 TQLYDNKSEKWIEIDGINTTEREAELLFLKETFIQV 346
>gi|443688793|gb|ELT91385.1| hypothetical protein CAPTEDRAFT_151271 [Capitella teleta]
Length = 412
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 140/338 (41%), Gaps = 33/338 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L + LRDY R+ + V + + L+ F LM +W +HVSP++
Sbjct: 88 CLSNTRLLRDYCRRDEHKDEVNKTTSNMKGALINAFANLMHSIWKGAP-DTHVSPNDFKS 146
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK---------DSSIVYKTFLGS 111
+ ++ K+F Q D +FL + L LH +N K+K DS V +
Sbjct: 147 QIARFA-KRFVGYNQQDAQEFLMYLLEGLHEDVNRVKEKRKNRIYDEDDSKTVSAQEMWK 205
Query: 112 MKVKTRKIPPVEL-EEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEV-LENII 169
M + V++ +++ L T ++T PF L+ + + ++V LE+
Sbjct: 206 MYLHQNDSKIVDIFVGQLKSSLTCTGCGHVSDTFDPFWDLSLPIKKGHGYGNDVSLESCF 265
Query: 170 PQVNLYTILTKFNNESEKEYKTYK--ENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNP 227
L+T + + + K + K F I P LI+++KRF +++ + K
Sbjct: 266 E---LFTSEEVLDGDEKPMCSKCKKRQKCTKSFSIQRFPKVLIIHLKRFNQDSSYRSKLS 322
Query: 228 TIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRV 287
T+VNFP+++++ + A MY+L A H G P G Y
Sbjct: 323 TMVNFPLQSLELNQFAAEKNGAP---------------AMYNLFAVSNHSGTPFGGHYTA 367
Query: 288 HLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYEL 325
+ H W+ D V+ I + +EAY+ YEL
Sbjct: 368 YTKHPETSTWHHFSDTRVSQISESQVQSSEAYVLFYEL 405
>gi|50293525|ref|XP_449174.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528487|emb|CAG62144.1| unnamed protein product [Candida glabrata]
Length = 427
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 140/327 (42%), Gaps = 55/327 (16%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L H+ P+RD FL ++ + LV+ FG ++RK W+ ++HV E+L
Sbjct: 149 LSHIPPIRDTFLVGMDTDKFDP--------LVKLFGLILRKHWSKNLLRAHVLTDELLSY 200
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
+ + K E DP FL LN L K+ + G + +
Sbjct: 201 ISINYPK---LLENKDPRVFLLSLLNALISKCPQLKQS-----FDCIKGRIDSQD----- 247
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKF 181
++ + K+ +R LL PF LT DLP +FK ++ I Q N+ ++ K+
Sbjct: 248 IDDDGKITKRRLL-----------PFTCLTLDLPGDSVFKSSSVDEAILQTNIEDLMKKY 296
Query: 182 NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKN--PTIVNFP--VKNV 237
+ E E T N +KR+ I LP YLIL+ RF N+ KN IV FP +K +
Sbjct: 297 DGEQE----TLVGNTIKRYRIAELPDYLILHYHRFDPNSKQPVKNRKRAIVTFPTSIKIL 352
Query: 238 DFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKW 297
D +L V K E+ L K I+ D S + + L +K G+W
Sbjct: 353 DVDFVLIENVVHKQETKNSPLKK-------------IITDDYSSK--WGIQLNNKSTGRW 397
Query: 298 YEIQDLHVTDILPQMITLTEAYIQIYE 324
E H+ + + L E YIQ+++
Sbjct: 398 MEFYGNHIKQKDEEFLFLDETYIQLWK 424
>gi|366990323|ref|XP_003674929.1| hypothetical protein NCAS_0B04730 [Naumovozyma castellii CBS 4309]
gi|342300793|emb|CCC68557.1| hypothetical protein NCAS_0B04730 [Naumovozyma castellii CBS 4309]
Length = 441
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 150/338 (44%), Gaps = 100/338 (29%)
Query: 4 HVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVV 63
H+ P+R++FL + G++ LL+Q+ LMRK+W+P ++++ E L +V
Sbjct: 184 HINPIRNFFL-------LTDLQGEN--LLLQKLSILMRKIWSPHLIRNYICTDEFLDFLV 234
Query: 64 LWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVE 123
+ KQ Q + DP FL W +N L +K+ KI +
Sbjct: 235 I--NKQLQKLPK-DPKIFLLWLINNL-----------------------AIKS-KILKQQ 267
Query: 124 LEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNN 183
L + ++++ K+T PF LT DLP +F+ + N +PQV + +L K+++
Sbjct: 268 LMLHCQGKIVIKMNNKKT---IPFWNLTLDLP---VFRSDF--NAVPQVKIGDLLKKYDD 319
Query: 184 ESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKN-----VD 238
E ++Y + LP +LIL+ RF + FP+KN V+
Sbjct: 320 EDSEKY-----------TLKQLPHFLILHFNRFDAKS----------EFPIKNRNQTLVE 358
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD--------GEPSN----GTYR 286
F ++LT +T Y L++NI+H EP+ ++
Sbjct: 359 FNELLT------------------IRNTNYKLISNIIHSVKRASDVSSEPNKKDDISLWK 400
Query: 287 VHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+ +Y+ I KW+E+ + + P+ + + E Y+QI+E
Sbjct: 401 IQVYNNNINKWFEVDGSTIKEKNPEFLFINETYLQIWE 438
>gi|315468039|ref|NP_001186800.1| ubiquitin specific peptidase 3 [Danio rerio]
Length = 524
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 132/323 (40%), Gaps = 45/323 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GDSS LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 213 RSQGDSSVSLVEEFRKTLCSLW--QGSQTAFSPDALF--YVIWKIMPSFRGYQQQDAHEF 268
Query: 82 LSWFLNTLHRALNGTKKK-----------DSSIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
L + L+ LHR + G K + + K F+ + L+ +V
Sbjct: 269 LRYLLDHLHREMQGNKNGSPSPPVTSDEPNHASESKCFINGTSTIVTSVFGGVLQNEVYC 328
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKE-- 188
+ TE K PFL L+ D+P K + P L L F + E +
Sbjct: 329 LICGTESRKF----DPFLDLSLDIPNQFRIKTTKDQEPGPTCTLSDCLRSFTDLEELDET 384
Query: 189 --YKTYK----ENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
Y +K + K+F I LP L L++KRF F K T V FP+ +D
Sbjct: 385 ELYMCHKCKKRQKSTKKFWIQKLPKVLCLHLKRFHWTAFLRNKVDTYVEFPMCGLDMKSY 444
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + E +YDL A +VH G +G Y + H+ G+WY
Sbjct: 445 LLEPE-------------NSLPERCLYDLAAVVVHHGSGIGSGHYTAYGRHE--GQWYHF 489
Query: 301 QDLHVTDILPQMITLTEAYIQIY 323
D VT + + + +AYI Y
Sbjct: 490 NDSTVTLVSEEAVLKAKAYILFY 512
>gi|66357988|ref|XP_626172.1| SnRNP assembly defective 1 like ubiquitin C-terminal hydrolase with
a UBP finger at the N-terminus [Cryptosporidium parvum
Iowa II]
gi|46227011|gb|EAK87961.1| SnRNP assembly defective 1 like ubiquitin C-terminal hydrolase with
a UBP finger at the N-terminus [Cryptosporidium parvum
Iowa II]
Length = 498
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 151/372 (40%), Gaps = 75/372 (20%)
Query: 2 LCHVTPLRDYFLREINYARV--KRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L +T RD L Y++ KR P F ++ E ++K++NP N K SP+ ++
Sbjct: 148 LSRITEFRDLCLSYQLYSKEIEKRIPDPLLFSII----ESIQKIYNPNNLKGKFSPYNLV 203
Query: 60 QAVVLWSRKQFQFTE------------QS----------DPIDFLSWFLNTLHRALN--- 94
+ + S +F F++ QS DP+ SW L + ++
Sbjct: 204 KIIEKKSNGKFSFSKISNISTSSNSFIQSNVGTQNSTIIDPMALFSWITYNLKKKIDKYL 263
Query: 95 -------------GTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKET 141
T K + +I G + K K P + E L+ +++ E
Sbjct: 264 RKFQIKFIPDIDKNTNKSNMNIFDVCIKGELYNKASKYPNNKKSESSTDNLMKSKKCSEL 323
Query: 142 ETESPFLYLTCDLPPPPLFKDEVL---------ENIIPQVNLYTILTKFNNESEKEYKTY 192
++ + + L P + + + + I Q+ +Y +L S +
Sbjct: 324 KSTASICFNCLSLTLPSIIETTMGISNSAQSNEDKTISQIPIYQLLDSKFFSSSSSSQLI 383
Query: 193 KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYE 252
+ LP YL ++ RF+K +EKN T+V+FP+ ++D + P
Sbjct: 384 ----------SKLPYYLFIHFSRFSKANLNLEKNKTLVSFPLIDLDLSSYIHP------- 426
Query: 253 STMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQM 312
D + T Y+L+ANI H G +G + L H +W EI+D++V +LPQ
Sbjct: 427 ----DYISLN-PCTKYNLIANISHKGTIQSGKFLTQLLHPTRNEWIEIEDINVKVVLPQE 481
Query: 313 ITLTEAYIQIYE 324
I L E YI +Y+
Sbjct: 482 ILLNETYIIVYK 493
>gi|365983318|ref|XP_003668492.1| hypothetical protein NDAI_0B02140 [Naumovozyma dairenensis CBS 421]
gi|343767259|emb|CCD23249.1| hypothetical protein NDAI_0B02140 [Naumovozyma dairenensis CBS 421]
Length = 438
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 142/340 (41%), Gaps = 82/340 (24%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L HVTPLRD+ L + +S+F VQ ++RK+W+P FK+HVS E
Sbjct: 169 LSHVTPLRDWLL-------LSDVSAESTF--VQGLSNIVRKIWSPYLFKNHVSADEFADF 219
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
+ + + ++DP D L W LN + K+ I++++ G + TRK
Sbjct: 220 LTV---QNLINKLRNDPADLLIWMLNFMAFDSKALKR----ILHESCQGKINFNTRKTSQ 272
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKF 181
+ PF L+ DLP + K+ N + V+L+ +L KF
Sbjct: 273 I----------------------LPFWKLSLDLPVNSILKEGQNANNLHHVDLHDLLRKF 310
Query: 182 NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD 241
++ K Y + LP +L+L+ RF F E +PVKN +
Sbjct: 311 TSKGNSNSKNY--------SLEKLPHFLVLHYNRF---DFKSE-------YPVKNRN--- 349
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH------------DGEPSNGTYRVHL 289
++ +Y S + K + Y L AN+VH + +++ L
Sbjct: 350 ----QILVQYPSVL------KLKEVEYVLQANVVHYVKRNPNISKRQLAQDDVSNWKIQL 399
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTP 329
++ KW EI T+ +++ L E Y+Q+++ RT P
Sbjct: 400 CNELTKKWIEIDANQTTNKDAELLFLNETYLQVWK-RTNP 438
>gi|241628902|ref|XP_002410027.1| ubiquitin-specific protease, putative [Ixodes scapularis]
gi|215503290|gb|EEC12784.1| ubiquitin-specific protease, putative [Ixodes scapularis]
Length = 340
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 136/343 (39%), Gaps = 35/343 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L H PL +Y L++ + + + L + F LM+ +W N + +SP
Sbjct: 18 CLAHTRPLLEYCLKDCYTSEINNITSSNRGALFEAFATLMKSIWRSSNGEYAISPQAFRS 77
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-------------DSSIVYKT 107
+ ++ + +++Q D +FL + L LH +N + DS +
Sbjct: 78 QIQKFAPRFMGYSQQ-DSQEFLHYLLQGLHEDINRITSRPRHVTTEIDDNLSDSQKAAEA 136
Query: 108 FLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLEN 167
+ ++ KI + + ++ L + ++ T PF L+ LP P ++
Sbjct: 137 WKRYLRFDDSKIVDCFVGQ-LKSTLKCSVCGHKSVTFDPFWDLS--LPIPKSSDSVTIQQ 193
Query: 168 IIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNP 227
+ +L + KT ++ K F I P L+L++KRF+ F K
Sbjct: 194 CLSLFTKEEVLDGDEKPTCSNCKT-RQRCTKSFTIHRCPKILVLHLKRFSPGERFRAKLN 252
Query: 228 TIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRV 287
T V FP+ N+D L P + + MY+L A H G +G Y
Sbjct: 253 TRVEFPLTNLD----LCPYMSNSHY-------------VMYNLYAVSNHSGSTYSGHYTA 295
Query: 288 HLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
H G+W+E D VT++ + +EAY+ YE T S
Sbjct: 296 TCLHPKSGEWHECNDTKVTEVSSSRVASSEAYVLFYEAATQSS 338
>gi|407040896|gb|EKE40394.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Entamoeba nuttalli P19]
Length = 375
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 107/236 (45%), Gaps = 49/236 (20%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFL-LVQRFGELMRKLWNPRNFKSHVSPHEML 59
++ H +R+ L NY V++ + L++R L+RK WN KS +SP+E++
Sbjct: 157 SIGHCKEIRNLLL---NYEEVEKVSSKAKCGELIKRVSMLIRKQWNSTIIKSVISPYELM 213
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKI 119
RK F +Q D I+F +F+N L + + F G +++
Sbjct: 214 SEFSRL-RKNFSIEKQEDVIEFYMFFINALLP------------LTQCFQGQIQI----- 255
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTC---DLPPPPLFKDEVLENIIPQVNLYT 176
E + + TC DLPP PL+ D++ E IIPQ+ L
Sbjct: 256 --------------------EEDGKKSIKNCTCIPLDLPPMPLYPDQMKEKIIPQLLLKD 295
Query: 177 ILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNF 232
IL K++ +++ T RF I +LP YL +KRF +NTF EKN T+V F
Sbjct: 296 ILKKYDGKTD----TLISKRSVRFLIKTLPKYLTFVIKRFERNTFQGEKNITVVEF 347
>gi|432863250|ref|XP_004070044.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Oryzias
latipes]
Length = 508
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 140/340 (41%), Gaps = 48/340 (14%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD+S LV+ F + + LW + ++ SP + A+ W F+ +Q D +F
Sbjct: 134 RSQGDNSVSLVEEFRKTLCSLW--QGNQTAFSPDSLFYAI--WKIMPSFRGYQQQDAHEF 189
Query: 82 LSWFLNTLHRALNGTKKKDSSIV-----YKTFLGSMKVKTRKIPPVE-------LEEKVR 129
+ + L+ LHR L ++ S V + K T P V L+ +V
Sbjct: 190 MRYLLDHLHRELQYSRNGASHPVSPQDGVRLSSAEGKCCTNGAPSVVTSIFGGLLQNEVN 249
Query: 130 QRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KE 188
+ TE K PFL L+ D+P K + P L L F + E E
Sbjct: 250 CLICGTESRKF----DPFLDLSLDIPSQFRQKRSKDQEPSPTCTLRDCLYSFTDLEELDE 305
Query: 189 YKTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF-G 240
+ Y ++ K+F I +LP L L++KRF F K T V FP+K +D G
Sbjct: 306 TELYYCHKCKKRQKSTKKFWIHNLPKVLCLHLKRFHWTAFLRNKIDTYVEFPLKGLDMRG 365
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYE 299
+L PE + S +YDLVA +VH G +G Y + H+ WY
Sbjct: 366 YLLEPE-------------NSLPGSCLYDLVAVVVHHGSGVGSGHYTAYGSHEAC--WYH 410
Query: 300 IQDLHVTDILPQMITLTEAYIQIYELRTT--PSPTAMSEG 337
D VT + +AYI Y RT PS ++G
Sbjct: 411 FNDSTVTLTNEDTVRKAKAYILFYVERTAEVPSDKVAADG 450
>gi|410908263|ref|XP_003967610.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Takifugu
rubripes]
Length = 612
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 138/334 (41%), Gaps = 48/334 (14%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GDSS LV+ F + + LW + ++ SP + +W F+ +Q D +F
Sbjct: 210 RSQGDSSVSLVEEFRKTLCSLW--QGSQTAFSPDSLF--YTIWKIMPSFRGYQQQDAHEF 265
Query: 82 LSWFLNTLHRAL----NGTKKKDS--------SIVYKTFL-GSMKVKTRKIPPVELEEKV 128
+ + L+ LHR L NG S + K + G+ V T + L+ +V
Sbjct: 266 MRYLLDHLHRELQYGRNGASHAASPQDGVRLSAADGKCCINGTASVVTSIFGGI-LQNEV 324
Query: 129 RQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-K 187
+ TE K PFL L+ D+P K + P L L F + E
Sbjct: 325 NCLICGTESRKF----DPFLDLSLDIPSQFRQKRSKDQEPGPTCTLSDCLRSFTDLEELD 380
Query: 188 EYKTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF- 239
E + Y ++ K+F + LP L L++KRF F K T V FP+K +D
Sbjct: 381 ETELYFCHKCKKRQKSTKKFWVQKLPKVLCLHLKRFHWTAFLRNKIDTYVEFPLKGLDMR 440
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWY 298
G +L PE + ES +YDLVA +VH G +G Y + H+G WY
Sbjct: 441 GYLLEPE-------------NSLPESCVYDLVAVVVHHGSGVGSGHYTAYGSHEGC--WY 485
Query: 299 EIQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + +AYI Y R + +
Sbjct: 486 HFNDSTVTLTNEDAVRKAKAYILFYVERAEQAAS 519
>gi|328351655|emb|CCA38054.1| U4/U6.U5 tri-snRNP-associated protein 2 [Komagataella pastoris CBS
7435]
Length = 426
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 138/335 (41%), Gaps = 110/335 (32%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL H+ +R+Y+L +N + SF Q G +R++W+ + F+ H+SP E+++
Sbjct: 188 ALGHIKAVRNYYL--LNSFK-------DSF--NQELGLFIRRMWSSKQFRPHISPAEIMR 236
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTL-HRALNGTKKKDSSIVYKTFLGSMKVKTRKI 119
V S+ +F T+Q P DF + L+ + HR V K+F G+
Sbjct: 237 VVTEESKNRFNLTQQKTPRDFFLFLLHLMPHR------------VRKSFRGAA------- 277
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
S FL + LP +F DE PQ+NL T++
Sbjct: 278 -----------------------GGSSFLMIPLKLPRTTVFNDET-----PQINLQTLIN 309
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFF-----VEKNPTIVNFPV 234
+F E +K K P L+L+ R ++ N TI+NFP
Sbjct: 310 QF--EKDKPVK-------------EAPRVLLLHFDRNQQDIQLDSVSGSAINNTIINFP- 353
Query: 235 KNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNG-----TYRVHL 289
+++ F + Y LVANIV D P + Y++ L
Sbjct: 354 QDLQF-------------------------NQTYKLVANIVQDVVPGSSGEDTIAYKIQL 388
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
Y KG +W +I DL V +I +++ L ++ +Q++E
Sbjct: 389 YDKGRDQWLQIHDLKVQEIERELLFLHQSVLQVWE 423
>gi|254569472|ref|XP_002491846.1| Conserved zinc-finger domain protein involved in pre-mRNA splicing
[Komagataella pastoris GS115]
gi|238031643|emb|CAY69566.1| Conserved zinc-finger domain protein involved in pre-mRNA splicing
[Komagataella pastoris GS115]
Length = 444
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 138/335 (41%), Gaps = 110/335 (32%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL H+ +R+Y+L +N + DS Q G +R++W+ + F+ H+SP E+++
Sbjct: 206 ALGHIKAVRNYYL--LNSFK------DS---FNQELGLFIRRMWSSKQFRPHISPAEIMR 254
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTL-HRALNGTKKKDSSIVYKTFLGSMKVKTRKI 119
V S+ +F T+Q P DF + L+ + HR V K+F G+
Sbjct: 255 VVTEESKNRFNLTQQKTPRDFFLFLLHLMPHR------------VRKSFRGAA------- 295
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
S FL + LP +F DE PQ+NL T++
Sbjct: 296 -----------------------GGSSFLMIPLKLPRTTVFNDET-----PQINLQTLIN 327
Query: 180 KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFF-----VEKNPTIVNFPV 234
+F E +K K P L+L+ R ++ N TI+NFP
Sbjct: 328 QF--EKDKPVK-------------EAPRVLLLHFDRNQQDIQLDSVSGSAINNTIINFP- 371
Query: 235 KNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNG-----TYRVHL 289
+++ F + Y LVANIV D P + Y++ L
Sbjct: 372 QDLQF-------------------------NQTYKLVANIVQDVVPGSSGEDTIAYKIQL 406
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
Y KG +W +I DL V +I +++ L ++ +Q++E
Sbjct: 407 YDKGRDQWLQIHDLKVQEIERELLFLHQSVLQVWE 441
>gi|367007818|ref|XP_003688638.1| hypothetical protein TPHA_0P00460 [Tetrapisispora phaffii CBS 4417]
gi|357526948|emb|CCE66204.1| hypothetical protein TPHA_0P00460 [Tetrapisispora phaffii CBS 4417]
Length = 482
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 149/344 (43%), Gaps = 75/344 (21%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L H+ +RDYFL + N D+ F R LM+++W+P+ FKSHV+ +E+L
Sbjct: 190 LTHMDDIRDYFLLDKNLT------NDTPFETKLRL--LMKRIWSPKLFKSHVAMNELLSF 241
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
+++ F +DP L +L + K I+ G + V + K
Sbjct: 242 ILI--DPSFSNRNINDP----RLLLLSLINSNINISKPLKDIIDTNIRGQVLVTSEKSVA 295
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKF 181
E K+++ ++ PF L+ DLP P+FKD + N +PQ+ L +L KF
Sbjct: 296 NSKESKIKKTIM------------PFSLLSLDLPDVPVFKDGMDTNALPQIKLSEMLMKF 343
Query: 182 NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTK--NTFFVEKNPTIVNFPVKNVDF 239
N +E + K+F++ SLP YLIL+ RF NT ++N T+V FP
Sbjct: 344 NGITE---HIQSKELKKKFKLESLPRYLILHFNRFDSKTNTPVKDRNQTLVEFP------ 394
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSN----------------- 282
T+ +L K KY L++N+VH+ S
Sbjct: 395 --------------TLMELKKTKYR-----LISNLVHEASQSITSNSSSHSHFLTVSDKD 435
Query: 283 --GTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+++ L + WYE+ + +++ L E Y+Q++E
Sbjct: 436 HVSKWKMILLNSKDNIWYEVDRTDIPKKERELLFLNEIYMQVWE 479
>gi|442748253|gb|JAA66286.1| Putative ubiquitin specific peptidase 2 [Ixodes ricinus]
Length = 373
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 131/343 (38%), Gaps = 35/343 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L H PL +Y L++ + + + L + F LM+ +W N + +SP
Sbjct: 51 CLAHTRPLLEYCLKDCYTSEINNITSSNRGALFEAFATLMKSIWRSSNGEYAISPQAFRS 110
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-------------DSSIVYKT 107
+ ++ + +++Q D +FL + L LH +N + DS +
Sbjct: 111 QIQKFAPRFMGYSQQ-DSQEFLHYLLQGLHEDINRITSRPRHVTTEIDDNLSDSQKAAEA 169
Query: 108 FLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLEN 167
+ ++ KI + +K T PF L+ LP P ++
Sbjct: 170 WKRYLRFDDSKIVDCFVXXXXXTLKCSVCGHKSV-TFDPFWDLS--LPIPKSSDSVTIQQ 226
Query: 168 IIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNP 227
+ +L + +T ++ K F I P L+L++KRF+ F K
Sbjct: 227 CLSLFTKEEVLDGDEKPTCSNCET-RQRCTKSFTIHRCPKILVLHLKRFSPGERFRAKLN 285
Query: 228 TIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRV 287
T V FP+ N+D L P + + MY+L A H G +G Y
Sbjct: 286 TRVEFPLTNLD----LCPYMSNSHY-------------VMYNLYAVSNHSGSTYSGHYTA 328
Query: 288 HLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
H G+W+E D VT++ + +EAY+ YE T S
Sbjct: 329 TCLHPKSGEWHECNDTKVTEVSSSRVASSEAYVLFYEAATQSS 371
>gi|397498540|ref|XP_003820038.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pan paniscus]
Length = 605
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 146/341 (42%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ LV+ F +L++ +W +P + VSP E
Sbjct: 284 CLSNTRELRDYCLQRL-YMRDLHHGSNAHTALVEEFAKLIQTIWTSSPNDV---VSPSEF 339
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 340 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQ 398
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 399 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 458
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 459 MRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 518
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 519 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 562
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G G+W+ D VT + P + ++AY+ YEL + PS
Sbjct: 563 RSPGTGEWHTFNDSSVTPMSPSQVRTSDAYLLFYELASPPS 603
>gi|348532572|ref|XP_003453780.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Oreochromis niloticus]
Length = 403
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 134/339 (39%), Gaps = 29/339 (8%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L + LRDY LR + + S+ L++ F +L + LW N +SP E
Sbjct: 76 CLSNTLELRDYCLRNCHITDLNNN-CRSNTALIEEFAKLTQSLWTSAN-NEPISPSEFRN 133
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNG-TKKKDSSIVYKTFLGSMKVKTRKI 119
V + K F Q D +FL + L+ LH +N T + S++ L + R
Sbjct: 134 QVQRCAPK-FVGCNQQDAQEFLRFLLDGLHNEVNRVTVRPKVSVLDFDHLADDEKGRRMW 192
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
E + L + K + T + + + P + + I +V L L
Sbjct: 193 NMYLAREDSKVVDLFVGQLKSSLTCTACGFRSTVFDPFWDLSIPIAQKISGEVTLKDCLR 252
Query: 180 KFNNES-----EKEYKT---YKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVN 231
F E E+ T + KRF I P L+L++KRF+ + K T VN
Sbjct: 253 LFTKEDVLDGEERPTCTKCKARRKCTKRFSIQKFPQILVLHLKRFSDSNVRASKLSTYVN 312
Query: 232 FPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYH 291
FP+K++D + + E +Y+L A H G G Y + +
Sbjct: 313 FPLKDLD----------------LREFASEPSERPVYNLYAVSNHSGNALGGHYTAYCKN 356
Query: 292 KGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
+G+WY D V+ + + + AY+ YEL TPS
Sbjct: 357 PALGEWYSYNDSRVSPMSSSQVRSSNAYVLFYEL-ATPS 394
>gi|391331221|ref|XP_003740048.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like
[Metaseiulus occidentalis]
Length = 908
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 17/141 (12%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMY 256
KRF + SLPP LI+++KRF+ N +F EK +VNFPVK++ G +L P
Sbjct: 739 KRFNLWSLPPILIIHLKRFSFNRYFREKLDVVVNFPVKDLSMGKWVLDP----------- 787
Query: 257 DLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLT 316
K++S YDL+ H G G Y + +K KW DL+V+ I I
Sbjct: 788 -----KHKSVPYDLIGVANHTGNLGAGHYTAYAKNKITKKWNHFDDLNVSSISENDIVSK 842
Query: 317 EAYIQIYELRTTPSPTAMSEG 337
+AY+ Y+ R P+ S+
Sbjct: 843 QAYVLFYQRREDPTSQNGSDA 863
>gi|89269005|emb|CAJ81533.1| ubiquitin specific protease 3 [Xenopus (Silurana) tropicalis]
Length = 522
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 136/334 (40%), Gaps = 49/334 (14%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD + LV+ F + + LW ++ SP + V+W F+ +Q D +F
Sbjct: 211 RSQGDVNVSLVEEFRKTLCALWQGN--QTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 266
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + + L+ +V
Sbjct: 267 MRYLLDHLHLELQGEFDGSSHSVLSQANCSRSACNKCCINGASTVVTSVFGGVLQNEVNC 326
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENI--IPQVNLYTILTKFNNESE-K 187
+ TE K PFL L+ D+P F+++ +N P L L F + E
Sbjct: 327 LICGTESRKF----DPFLDLSLDIPSQ--FRNKRCKNQENGPTCTLRDCLRSFTDLEELD 380
Query: 188 EYKTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
E + Y K+ K+F I LP L L++KRF + K T V+FP++ +D
Sbjct: 381 ETELYTCLKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVDFPLRGLDMK 440
Query: 241 D-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWY 298
+L PE ES +YDL A +VH G +G Y + HK G+W+
Sbjct: 441 SFLLEPE-------------NIGPESCLYDLAAVVVHHGSGVGSGHYTAYATHK--GRWF 485
Query: 299 EIQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R P+ T
Sbjct: 486 HFNDSTVTLTEEETVAKAKAYILFYVERQVPATT 519
>gi|114794332|pdb|2HD5|A Chain A, Usp2 In Complex With Ubiquitin
Length = 359
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 147/346 (42%), Gaps = 32/346 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ LV+ F +L++ +W +P + VSP E
Sbjct: 27 CLSNTRELRDYCLQRL-YMRDLHHGSNAHTALVEEFAKLIQTIWTSSPNDV---VSPSEF 82
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 83 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQ 141
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 142 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 201
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 202 MRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 261
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 262 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 305
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTAMS 335
G G+W+ D VT + + ++AY+ YEL + PS A +
Sbjct: 306 RSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPSRMAAA 351
>gi|403262562|ref|XP_003923645.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Saimiri
boliviensis boliviensis]
Length = 606
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ LV+ F +L++ +W +P + VSP E
Sbjct: 285 CLSNTRELRDYCLQRL-YVRDLHHSSNAHTALVEEFAKLIQTIWTSSPNDV---VSPSEF 340
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 341 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVAPRPKSNPENLDHLPDDEKGRQ 399
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 400 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 459
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 460 MRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 519
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 520 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 563
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 564 RSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 604
>gi|55742515|ref|NP_001006783.1| ubiquitin thiolesterase 3 [Xenopus (Silurana) tropicalis]
gi|49523089|gb|AAH75590.1| ubiquitin specific peptidase 3 [Xenopus (Silurana) tropicalis]
Length = 467
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 138/335 (41%), Gaps = 51/335 (15%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD + LV+ F + + LW ++ SP + V+W F+ +Q D +F
Sbjct: 156 RSQGDVNVSLVEEFRKTLCALWQGN--QTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 211
Query: 82 LSWFLNTLHRALNGTKKKDSSIVYK------------TFLGSMKVKTRKIPPVELEEKVR 129
+ + L+ LH L G S V G+ V T V L+ +V
Sbjct: 212 MRYLLDHLHLELQGEFDGSSHSVLSQANCSRSASNKCCINGASTVVTSVFGGV-LQNEVN 270
Query: 130 QRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENI--IPQVNLYTILTKFNNESE- 186
+ TE K PFL L+ D+P F+++ +N P L L F + E
Sbjct: 271 CLICGTESRKF----DPFLDLSLDIPSQ--FRNKRCKNQENGPTCTLRDCLRSFTDLEEL 324
Query: 187 KEYKTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF 239
E + Y K+ K+F I LP L L++KRF + K T V+FP++ +D
Sbjct: 325 DETELYTCLKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVDFPLRGLDM 384
Query: 240 GD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKW 297
+L PE ES +YDL A +VH G +G Y + HK G+W
Sbjct: 385 KSFLLEPE-------------NIGPESCLYDLAAVVVHHGSGVGSGHYTAYATHK--GRW 429
Query: 298 YEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
+ D VT + + +AYI Y R P+ T
Sbjct: 430 FHFNDSTVTLTEEETVAKAKAYILFYVERQVPATT 464
>gi|3386550|gb|AAC28392.1| ubiquitin-specific protease UBP41 [Homo sapiens]
Length = 353
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 145/342 (42%), Gaps = 32/342 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ LV+ F +L++ +W +P + VSP E
Sbjct: 32 CLSNTRELRDYCLQRL-YMRDLHHGSNAHTALVEEFAKLIQTIWTSSPNDV---VSPSEF 87
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 88 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQ 146
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 147 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 206
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 207 MRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 266
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 267 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 310
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSP 331
G G+W+ D VT + + ++AY+ YEL + SP
Sbjct: 311 RSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLHFYELASPTSP 352
>gi|344313155|ref|NP_001230688.1| ubiquitin carboxyl-terminal hydrolase 2 isoform c [Homo sapiens]
Length = 362
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ LV+ F +L++ +W +P + VSP E
Sbjct: 41 CLSNTRELRDYCLQRL-YMRDLHHGSNAHTALVEEFAKLIQTIWTSSPNDV---VSPSEF 96
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 97 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQ 155
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 156 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 215
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 216 MRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 275
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 276 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 319
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 320 RSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 360
>gi|27371223|gb|AAH41366.1| USP2 protein [Homo sapiens]
gi|119587890|gb|EAW67486.1| ubiquitin specific peptidase 2, isoform CRA_c [Homo sapiens]
Length = 362
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ LV+ F +L++ +W +P + VSP E
Sbjct: 41 CLSNTRELRDYCLQRL-YMRDLHHGSNAHTALVEEFAKLIQTIWTSSPNDV---VSPSEF 96
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 97 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQ 155
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 156 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 215
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 216 MRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 275
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 276 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 319
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 320 RSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 360
>gi|118138325|pdb|2IBI|A Chain A, Covalent Ubiquitin-Usp2 Complex
Length = 374
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 139/341 (40%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ LV+ F +L++ +W +P + VSP E
Sbjct: 53 CLSNTRELRDYCLQRL-YMRDLHHGSNAHTALVEEFAKLIQTIWTSSPNDV---VSPSEF 108
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 109 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQ 167
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 168 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 227
Query: 178 LTKFNNES--------EKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E ++ +K+F I P L+L++KRF+++ K T
Sbjct: 228 MRLFTKEDVLDGDAAPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 287
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + +Y+L A H G G Y +
Sbjct: 288 VNFPLRDLD----------------LREFASENTNHAVYNLYAVSNHSGTTMGGHYTAYC 331
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 332 RSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 372
>gi|430800750|pdb|3V6C|A Chain A, Crystal Structure Of Usp2 In Complex With Mutated
Ubiquitin
gi|430800752|pdb|3V6E|A Chain A, Crystal Structure Of Usp2 And A Mutant Form Of Ubiquitin
Length = 367
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 141/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ LV+ F +L++ +W +P + VSP E
Sbjct: 46 CLSNTRELRDYCLQRL-YMRDLHHGSNAHTALVEEFAKLIQTIWTSSPNDV---VSPSEF 101
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 102 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQ 160
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 161 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 220
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 221 MRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 280
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + +Y+L A H G G Y +
Sbjct: 281 VNFPLRDLD----------------LREFASENTNHAVYNLYAVSNHSGTTMGGHYTAYC 324
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 325 RSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 365
>gi|221043762|dbj|BAH13558.1| unnamed protein product [Homo sapiens]
Length = 328
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ LV+ F +L++ +W +P + VSP E
Sbjct: 7 CLSNTRELRDYCLQRL-YMRDLHHGSNAHTALVEEFAKLIQTIWTSSPNDV---VSPSEF 62
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 63 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQ 121
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 122 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 181
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 182 MRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 241
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 242 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 285
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 286 RSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 326
>gi|123998135|gb|ABM86669.1| ubiquitin specific peptidase 2 [synthetic construct]
Length = 605
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 146/341 (42%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ LV+ F +L++ +W +P + VSP E
Sbjct: 284 CLSNTRELRDYCLQRL-YMRDLHHGSNAHTALVEEFAKLIQTIWTSSPNDV---VSPSEF 339
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 340 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQ 398
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 399 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 458
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 459 MRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 518
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 519 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 562
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G G+W+ D VT + + + ++AY+ YEL + PS
Sbjct: 563 RSPGTGEWHTFNDSSVTPMSSRQVRTSDAYLLFYELASPPS 603
>gi|28565285|ref|NP_741994.1| ubiquitin carboxyl-terminal hydrolase 2 isoform b [Homo sapiens]
gi|410045962|ref|XP_003952100.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pan
troglodytes]
gi|24943173|gb|AAN65363.1|AF440755_1 ubiquitin specific protease 2b [Homo sapiens]
gi|119587888|gb|EAW67484.1| ubiquitin specific peptidase 2, isoform CRA_a [Homo sapiens]
gi|158257942|dbj|BAF84944.1| unnamed protein product [Homo sapiens]
gi|167887742|gb|ACA06096.1| ubiquitin carboxyl-terminal hydrolase 2 variant 2 [Homo sapiens]
Length = 396
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ LV+ F +L++ +W +P + VSP E
Sbjct: 75 CLSNTRELRDYCLQRL-YMRDLHHGSNAHTALVEEFAKLIQTIWTSSPNDV---VSPSEF 130
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 131 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQ 189
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 190 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 249
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 250 MRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 309
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 310 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 353
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 354 RSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 394
>gi|299856909|pdb|3NHE|A Chain A, High Resolution Structure (1.26a) Of Usp2a In Complex With
Ubiquitin
Length = 348
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ LV+ F +L++ +W +P + VSP E
Sbjct: 27 CLSNTRELRDYCLQRL-YMRDLHHGSNAHTALVEEFAKLIQTIWTSSPNDV---VSPSEF 82
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 83 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQ 141
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 142 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 201
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 202 MRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 261
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 262 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 305
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 306 RSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 346
>gi|30584279|gb|AAP36388.1| Homo sapiens ubiquitin specific protease 2 [synthetic construct]
gi|60652721|gb|AAX29055.1| ubiquitin specific protease 2 [synthetic construct]
Length = 606
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ LV+ F +L++ +W +P + VSP E
Sbjct: 284 CLSNTRELRDYCLQRL-YMRDLHHGSNAHTALVEEFAKLIQTIWTSSPNDV---VSPSEF 339
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 340 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQ 398
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 399 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 458
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 459 MRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 518
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 519 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 562
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 563 RSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 603
>gi|188528692|ref|NP_004196.4| ubiquitin carboxyl-terminal hydrolase 2 isoform a [Homo sapiens]
gi|20141855|sp|O75604.2|UBP2_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|12804005|gb|AAH02854.1| Ubiquitin specific peptidase 2 [Homo sapiens]
gi|12804195|gb|AAH02955.1| Ubiquitin specific peptidase 2 [Homo sapiens]
gi|119587889|gb|EAW67485.1| ubiquitin specific peptidase 2, isoform CRA_b [Homo sapiens]
gi|123983451|gb|ABM83458.1| ubiquitin specific peptidase 2 [synthetic construct]
gi|167887743|gb|ACA06097.1| ubiquitin carboxyl-terminal hydrolase 2 variant 1 [Homo sapiens]
Length = 605
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ LV+ F +L++ +W +P + VSP E
Sbjct: 284 CLSNTRELRDYCLQRL-YMRDLHHGSNAHTALVEEFAKLIQTIWTSSPNDV---VSPSEF 339
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 340 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQ 398
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 399 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 458
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 459 MRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 518
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 519 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 562
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 563 RSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 603
>gi|241957679|ref|XP_002421559.1| ubiquitin carboxyl hydrolase, putative [Candida dubliniensis CD36]
gi|223644903|emb|CAX40901.1| ubiquitin carboxyl hydrolase, putative [Candida dubliniensis CD36]
Length = 391
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 139/325 (42%), Gaps = 79/325 (24%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L H+ P+R+++L + G + L+ RK+W+P FKSH++PHE +
Sbjct: 143 VLAHIEPIRNHYLLMADNTNSDSLNGHLALLI--------RKMWSPHLFKSHIAPHEFMN 194
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+V+ S+K+F E+ P FL W LN ++G Y+ G +++ T +
Sbjct: 195 SVIDTSKKRFTL-EKGHPKLFLVWLLN----GVDGP--------YECLRGEIEITTTPVV 241
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTK 180
P E EKV L T+ T+S F +L+ D+P + +V+L ++ K
Sbjct: 242 PHEGSEKVEFVSLDTK-----TTQSKFWFLSVDVPSQ-----------VEEVSLVELMRK 285
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
++ ES + K ++ ++I P ++++ +E +V F
Sbjct: 286 YDGESTTQGKQE----IRTYKIVEYPKFMVV----------VLEGGSAVVKF-------- 323
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
DL KYE L+ ++ + +G + V L + G W I
Sbjct: 324 ------------GEEMDLNGKKYE-----LLCSVKKN--KKSGGWGVSLRTQ-TGGWVSI 363
Query: 301 QDLHVTDILPQMITLTEAYIQIYEL 325
+DL V + +++ L + YI ++ L
Sbjct: 364 EDLQVKEQSSELLFLDKNYILVWRL 388
>gi|114640783|ref|XP_001166112.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 5 [Pan
troglodytes]
Length = 605
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ LV+ F +L++ +W +P + VSP E
Sbjct: 284 CLSNTRELRDYCLQRL-YMRDLHHGSNAHTALVEEFAKLIQTIWTSSPNDV---VSPSEF 339
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 340 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQ 398
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 399 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 458
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 459 MRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 518
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 519 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 562
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 563 RSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 603
>gi|118359579|ref|XP_001013029.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89294796|gb|EAR92784.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 528
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 158/348 (45%), Gaps = 43/348 (12%)
Query: 1 ALCHVTPLRDYFL--REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEM 58
L ++ PL DY L +E N ++ P G S ++++ F L+R++WN + + VSP E
Sbjct: 184 CLSNLQPLTDYCLQNKEDNEINIQNPMG-SGGVVIKAFANLVRQIWNQK--EDSVSPDEF 240
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMK----- 113
L+ V+ + K + Q D +FL + L+ +H LN +KK + K + ++
Sbjct: 241 LR-VISYFNKIYSSGRQQDSQEFLLYLLDQIHEDLNRVEKK-PYVEQKEYFKNLNQKELE 298
Query: 114 ----------VKTRKIPPVELEEKVRQRLLLTEEYKETETE-SPFLYLTCDLPPPPLFKD 162
+K K V+L + + L + K + + PF+YLT +P P ++
Sbjct: 299 KLAADSWGDYLKRNKSVIVDLFQGQLKNTLKCLKCKTAKYQFEPFMYLT--VPIPQKAEN 356
Query: 163 EV-LENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTF 221
E+ +++ I Q IL E K ++++ K+ ++ LPP L++ +KRF
Sbjct: 357 EINIQDCIEQFTEKEILDGDEKWFCPECKDFQKS-EKKIDLWKLPPILMICMKRFQYTAQ 415
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
+K T V FPV++ D + + ++ E +YDL + I H G +
Sbjct: 416 SKKKITTKVQFPVQHFDMSEFIPKTLQK--------------EKPIYDLFSVISHKGYLN 461
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILP--QMITLTEAYIQIYELRT 327
G Y + ++ +WY D + I + I EAY+ Y+ T
Sbjct: 462 FGHYVAYCKNQEDKQWYLFNDSKTSLIQDPEENIPKKEAYVLFYQKST 509
>gi|401625923|gb|EJS43903.1| sad1p [Saccharomyces arboricola H-6]
Length = 448
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 136/337 (40%), Gaps = 73/337 (21%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
+ H+ PLRD+FL D ++R ++K+W+P+ FK ++S +
Sbjct: 168 ISHMIPLRDHFLLN---------DFDDQDEFIKRLSICIKKIWSPKLFKHYLSVDDF--- 215
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
V K+ +P L W LN + + K+ SI+ + G +++ K
Sbjct: 216 VTYLKVKEGLSLSVVNPRFLLLWLLN----KICSSSKQLKSILNQYCKGKVRIIGNK-RE 270
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKF 181
E V ++ PF LT DLP FKD + +PQVN+ +LTKF
Sbjct: 271 TEGSGTVTSKV----------NVKPFWVLTLDLPEFSPFKDGNTVDNLPQVNITQLLTKF 320
Query: 182 NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTF--FVEKNPTIVNFPVKNVDF 239
N T FEI LP +LI + RF +++ +N TIV F
Sbjct: 321 TNVRTSSVDTV-------FEIVQLPQFLIFHFNRFDRSSEHPVKNRNQTIVEF------- 366
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH------------DGEPSNGTYRV 287
S+ +++ AKY L AN+VH +
Sbjct: 367 -------------SSELEVLHAKYR-----LKANVVHMVIKSSSTDSNDSNRNEKSHWVT 408
Query: 288 HLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
LY+ I KW EI ++ T+ +++ L E +IQ++E
Sbjct: 409 QLYNDKIKKWIEIDGINTTEKEAELLFLNETFIQVWE 445
>gi|148238088|ref|NP_001090549.1| ubiquitin thiolesterase 3 [Xenopus laevis]
gi|117558253|gb|AAI26024.1| LOC100036785 protein [Xenopus laevis]
Length = 522
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 137/334 (41%), Gaps = 49/334 (14%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD + LV+ F + + LW ++ SP + V+W F+ +Q D +F
Sbjct: 211 RSQGDVNVSLVEEFRKTLCALWQGN--QTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 266
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S+ K + + L+ +V
Sbjct: 267 MRYLLDHLHLELQGEFDGSSHSVLSQANCSRSVSNKCCINGASTVVTSVFGGVLQNEVNC 326
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENI--IPQVNLYTILTKFNNESE-K 187
+ TE K PFL L+ D+P F+++ +N P L L F + E
Sbjct: 327 LICGTESRKF----DPFLDLSLDIPSQ--FRNKRCKNQENGPTCTLRDCLRSFTDLEELD 380
Query: 188 EYKTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
E + Y K+ K+F I LP L L++KRF + K T V+FP++ +D
Sbjct: 381 ETELYTCLKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVDFPLRGLDMK 440
Query: 241 D-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWY 298
+L PE ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 441 SFLLEPE-------------NIGPESCLYDLEAVVVHHGSGVGSGHYTAYATHE--GRWF 485
Query: 299 EIQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R P+ T
Sbjct: 486 HFNDSTVTLTEEETVAKAKAYILFYVERQVPATT 519
>gi|417400194|gb|JAA47059.1| Putative ubiquitin carboxyl-terminal hydrolase 2 [Desmodus
rotundus]
Length = 396
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 142/339 (41%), Gaps = 28/339 (8%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L + LRDY L+ + Y R ++ L++ F +L++ +W + VSP E
Sbjct: 75 CLSNTRELRDYCLQRL-YMRDLSHSSNAHTALMEEFAKLIQTIWTS-SLNDVVSPSEFKT 132
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+ ++ + + +Q D +FL + L+ LH A+N + S K R++
Sbjct: 133 QIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNAVNRVTVRPKSNPENLDHLPDDEKGRQMW 191
Query: 121 PVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
LE E R L + K + T + Y + P + + P+V L +
Sbjct: 192 RKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMR 251
Query: 180 KFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVN 231
F E EK ++ +K+F I P L+L++KRF+++ K T VN
Sbjct: 252 LFTKEDVLDGDEKPTCCRCRTRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVN 311
Query: 232 FPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYH 291
FP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 312 FPLRDLDLREFAS-------ETTNH---------AVYNLYAVSNHSGTTVGGHYTAYCRS 355
Query: 292 KGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + P
Sbjct: 356 PVTGEWHTFNDSSVTSMFSSQVRTSDAYLLFYELASPPC 394
>gi|402895527|ref|XP_003910877.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Papio anubis]
Length = 605
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 145/341 (42%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ L++ F +L++ +W +P + VSP E
Sbjct: 284 CLSNTRELRDYCLQRL-YMRDLHHSSNAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 339
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 340 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQ 398
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 399 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 458
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 459 MRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 518
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 519 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 562
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 563 RSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 603
>gi|417402232|gb|JAA47969.1| Putative ubiquitin carboxyl-terminal hydrolase 3 [Desmodus
rotundus]
Length = 520
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 264
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 265 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 324
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 325 LICGTESRKF----DPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDET 380
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 381 ELYMCHKCRKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 440
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + E+ +YDL A +VH G +G Y + H+ G+W+
Sbjct: 441 LLEPE-------------NSGPENCLYDLAAVVVHHGSGVGSGHYTAYAKHE--GRWFHF 485
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + +AYI Y R + +
Sbjct: 486 NDSTVTLADEDTVVKAKAYILFYVERQAKAGS 517
>gi|388454150|ref|NP_001252825.1| ubiquitin carboxyl-terminal hydrolase 2 [Macaca mulatta]
gi|355567137|gb|EHH23516.1| hypothetical protein EGK_06991 [Macaca mulatta]
gi|355752713|gb|EHH56833.1| hypothetical protein EGM_06315 [Macaca fascicularis]
gi|380789853|gb|AFE66802.1| ubiquitin carboxyl-terminal hydrolase 2 isoform a [Macaca mulatta]
Length = 605
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 145/341 (42%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ L++ F +L++ +W +P + VSP E
Sbjct: 284 CLSNTRELRDYCLQRL-YMRDLHHSSNAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 339
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 340 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQ 398
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 399 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 458
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 459 MRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 518
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 519 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 562
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 563 RSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 603
>gi|417403199|gb|JAA48417.1| Putative ubiquitin carboxyl-terminal hydrolase 2 [Desmodus
rotundus]
Length = 602
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 142/338 (42%), Gaps = 28/338 (8%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L + LRDY L+ + Y R ++ L++ F +L++ +W + VSP E
Sbjct: 281 CLSNTRELRDYCLQRL-YMRDLSHSSNAHTALMEEFAKLIQTIWT-SSLNDVVSPSEFKT 338
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+ ++ + + +Q D +FL + L+ LH A+N + S K R++
Sbjct: 339 QIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNAVNRVTVRPKSNPENLDHLPDDEKGRQMW 397
Query: 121 PVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
LE E R L + K + T + Y + P + + P+V L +
Sbjct: 398 RKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMR 457
Query: 180 KFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVN 231
F E EK ++ +K+F I P L+L++KRF+++ K T VN
Sbjct: 458 LFTKEDVLDGDEKPTCCRCRTRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVN 517
Query: 232 FPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYH 291
FP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 518 FPLRDLDLREFAS-------ETTNH---------AVYNLYAVSNHSGTTVGGHYTAYCRS 561
Query: 292 KGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTP 329
G+W+ D VT + + ++AY+ YEL + P
Sbjct: 562 PVTGEWHTFNDSSVTSMFSSQVRTSDAYLLFYELASPP 599
>gi|348583870|ref|XP_003477695.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cavia
porcellus]
Length = 520
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 139/333 (41%), Gaps = 47/333 (14%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GDSS LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 209 RSQGDSSVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 264
Query: 82 LSWFLNTLHRALNGT---------KKKDSSIVYK---TFLGSMKVKTRKIPPVELEEKVR 129
+ + L+ LH L G +++SS+ G+ V T V L+ +V
Sbjct: 265 MRYLLDHLHLELQGGFNGVSGTAILQENSSLAASNKCCINGASTVVTAVFGGV-LQNEVN 323
Query: 130 QRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KE 188
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 324 CLICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDE 379
Query: 189 YKTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 380 TELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKC 439
Query: 242 -ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYE 299
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 440 YLLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYAVHE--GRWFH 484
Query: 300 IQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + +AYI Y R + +
Sbjct: 485 FNDSTVTLTDEDTVGKAKAYILFYVERQAKAGS 517
>gi|443706691|gb|ELU02606.1| hypothetical protein CAPTEDRAFT_165719 [Capitella teleta]
Length = 515
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 139/326 (42%), Gaps = 35/326 (10%)
Query: 26 GDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSR-KQFQFTEQSDPIDFLSW 84
G+ F+ V+ + + LW + K+ +SP + V+W +F+ +Q D +F+ +
Sbjct: 203 GNDVFV-VEELRKTLVALW--QGSKAAISPESLFS--VIWKVVPRFRGYQQQDAHEFMRY 257
Query: 85 FLNTLHRAL------NGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEY 138
L+ LH L N T + +S V + LG V T + L+ +V + E
Sbjct: 258 LLDRLHTELMTLIPYNATVRPNSPYV-GSPLGKSSVVTAIFGGI-LQSEVNCLICGMESK 315
Query: 139 KETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKE--------YK 190
K PFL ++ D+P K +N +L L+ F + E E
Sbjct: 316 KH----DPFLDISLDIPSKFTCKTPNPKNGEIVCDLSDCLSSFTDVEELEDTELYMCANC 371
Query: 191 TYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAK 250
++ K+F I LP L L++KRF +T+ K T +NFP++ ++ + +
Sbjct: 372 KCRQRSTKKFWIRRLPNVLCLHLKRFRWSTYLRVKVDTHINFPLRGLEMNHFMLDNLHET 431
Query: 251 YESTMYDLVKAKYESTMYDLVANIVHDGEPS-NGTYRVHLYHKGIGKWYEIQDLHVTDIL 309
S+ A + YDL A +VH G + +G Y + H+ G WY D VT
Sbjct: 432 RNSS------ASGSQSKYDLAAVVVHHGSGAGSGHYTSYAVHE--GGWYHFNDSSVTQCD 483
Query: 310 PQMITLTEAYIQIYELRTTPSPTAMS 335
+ + +AYI Y R P +S
Sbjct: 484 EETVAKCKAYILFYVRRDIKLPEYLS 509
>gi|291413016|ref|XP_002722763.1| PREDICTED: ubiquitin specific peptidase 2 [Oryctolagus cuniculus]
Length = 607
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 145/341 (42%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ L++ F +L++ +W +P + VSP E
Sbjct: 286 CLSNTRELRDYCLQRL-YMRDLSHSSNAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 341
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 342 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTARPKSNPENLDHLPDDEKGRQ 400
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 401 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 460
Query: 178 LTKFNNES--EKEYK------TYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E + E K ++ +K+F I P L+L++KRF+++ K T
Sbjct: 461 MRLFTKEDVLDGEEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 520
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 521 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 564
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 565 RSPATGEWHTFNDSSVTAMSSSQVRTSDAYLLFYELASPPS 605
>gi|16552833|dbj|BAB71388.1| unnamed protein product [Homo sapiens]
Length = 605
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 144/341 (42%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ LV+ F +L++ +W +P + VSP E
Sbjct: 284 CLSNTRELRDYCLQRL-YMRDLHHGSNAHTALVEEFAKLIQTIWTSSPNDV---VSPSEF 339
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 340 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQ 398
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 399 MWRKYLEREDSRIGDLFVGQLKGSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 458
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L +KRF+++ K T
Sbjct: 459 MRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLRLKRFSESRIRTSKLTTF 518
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 519 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 562
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 563 RSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 603
>gi|156373862|ref|XP_001629529.1| predicted protein [Nematostella vectensis]
gi|156216531|gb|EDO37466.1| predicted protein [Nematostella vectensis]
Length = 452
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 131/309 (42%), Gaps = 47/309 (15%)
Query: 31 LLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLH 90
LV+ +++ LW N SH SP E L + V +F+ +Q D +F+ + ++ LH
Sbjct: 166 CLVEELRKVLCALWQG-NCVSH-SP-EALFSTVWKVVPRFRGYQQQDAHEFMHYLMDRLH 222
Query: 91 RALNGTKKK---DSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPF 147
L ++K +IV F G L+ +V +TE K PF
Sbjct: 223 TELLLSQKACFGQDTIVTGIFGGI------------LQSEVTCLTCMTESRKL----DPF 266
Query: 148 LYLTCDLPPP-PLFKDEVLENIIPQVNLYTILTKFNN-ESEKEYKTY-------KENFLK 198
L L+ ++PP K + EN P L + F E E + Y KE K
Sbjct: 267 LDLSLEIPPEFQTRKAKSREN--PFCQLEDCMKHFVALEKLAESELYMCLKCKKKEQSTK 324
Query: 199 RFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDL 258
+F I LP L L++KRF F K T V FP++ +D ++P T+
Sbjct: 325 KFWIQRLPNVLCLHLKRFRFQAFLRSKIDTYVQFPIRGLD----MSP-------YTLKGQ 373
Query: 259 VKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
K + + +YDL A +VH G S G Y +H G WY D V+ I +M+ +
Sbjct: 374 EKGETKPVLYDLAAVVVHHGSGVSAGHYTTFAFHD--GAWYNFNDSSVSRIDEEMVAKCK 431
Query: 318 AYIQIYELR 326
YI Y R
Sbjct: 432 GYIFFYTRR 440
>gi|296213409|ref|XP_002753258.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Callithrix jacchus]
Length = 520
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 138/332 (41%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GDS+ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 209 RSQGDSNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 264
Query: 82 LSWFLNTLHRALNG--TKKKDSSIVYK--TFLGSMKVKTRKIPPVE-------LEEKVRQ 130
+ + L+ LH L G S+I+ + T S K V L+ +V
Sbjct: 265 MRYLLDHLHLELQGGFNGVSRSAILQENSTLFASNKCCINGASTVVTAIFGGILQNEVNC 324
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 325 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 380
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 381 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 440
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 441 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYAAHE--GRWFHF 485
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R + +
Sbjct: 486 NDSTVTVTDEETVVKAKAYILFYVERQAKAGS 517
>gi|154299949|ref|XP_001550392.1| hypothetical protein BC1G_10865 [Botryotinia fuckeliana B05.10]
Length = 144
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 20/125 (16%)
Query: 212 YVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLV 271
++KRF+ N F E+NPTIV F +N+D + P++K E YDLV
Sbjct: 18 HIKRFSHNKFVDERNPTIVTFDARNLDMSPYIEPDMKHARPG----------EPIWYDLV 67
Query: 272 ANIVH----------DGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQ 321
ANIVH +GE +++V L K G+W +QDL V + + L E+Y+Q
Sbjct: 68 ANIVHEAVRGREDSVEGESEKRSWKVQLRDKATGEWKVVQDLFVEGGQREFLHLGESYLQ 127
Query: 322 IYELR 326
++E R
Sbjct: 128 VWEKR 132
>gi|344293060|ref|XP_003418242.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Loxodonta
africana]
Length = 396
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 145/341 (42%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 75 CLSNTRELRDYCLQRL-YLRDLSHSSSAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 130
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 131 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTVRPKSNPENLDRLPDDEKGRQ 189
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 190 MWRKYLEREDSRIGDLFVGQLKSSLTCTECGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 249
Query: 178 LTKFNNES--EKEYK------TYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E + + K ++ +K+F I P L+L++KRF+++ K T
Sbjct: 250 MRLFTKEDVLDGDEKPTCCRCGARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 309
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V+FP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 310 VSFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 353
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 354 RSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 394
>gi|384498157|gb|EIE88648.1| hypothetical protein RO3G_13359 [Rhizopus delemar RA 99-880]
Length = 523
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 145/342 (42%), Gaps = 51/342 (14%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPG-DSSFLLVQRFGELMRKLWNPR-NFKSHVSPHEM 58
L P YF+ + V R + +L ++F +L+R +WN NF VSP
Sbjct: 187 CLSGTLPFARYFISGVFRQHVNRTNKLGTGGILTEKFADLLRAIWNENYNF---VSPMSF 243
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALN------------GTKKKD------ 100
+A++ ++ + F T+Q D +FL++ L+ +H +N TK+++
Sbjct: 244 REAIIRFAPR-FSGTDQHDSQEFLTFLLDGIHEDVNLASHNHSGHLPTMTKQEELEFEKL 302
Query: 101 -----SSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLP 155
S++ ++ +L + I + + R RL + + T +PF+ L+ +P
Sbjct: 303 PDWQASAMAWERYLS----RNTSIVVSLFQGQYRSRLTCSSCKHTSTTYTPFMSLSLPIP 358
Query: 156 PPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTY--------KENFLKRFEITSLPP 207
K I V LY L F E E K K+ I+ LP
Sbjct: 359 AKSRLK-------ISNVTLYQCLDYFVKEEVLEKDDAWMCPKCGKKRKATKQLMISRLPD 411
Query: 208 YLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTM 267
L++++KRF+ + F K +V +P+K +D + ++ + + S+ L + + ST
Sbjct: 412 VLLIHLKRFSADGLFKNKLDVMVKYPIKGLDLYNYVSRFIPPRPPSSSTSLAQDRTLST- 470
Query: 268 YDLVANIVHDGEPSNGTYRVHL--YHKGIGKWYEIQDLHVTD 307
YDL A H G S G Y ++ H+ I +++ D
Sbjct: 471 YDLYAVSNHYGSLSGGHYTAYVKDGHRNIWHYFDDSKFSTCD 512
>gi|327286811|ref|XP_003228123.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Anolis
carolinensis]
Length = 533
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 136/325 (41%), Gaps = 48/325 (14%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD+ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 210 RSQGDNGVSLVEEFRKTLCALW--QGSQAAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 265
Query: 82 LSWFLNTLHRALNG--TKKKDSSIVYK-----------TFLGSMKVKTRKIPPVELEEKV 128
+ + L+ LHR L G SS++ + G+ V T + L+ +V
Sbjct: 266 MRYLLDHLHRELQGGFNGVSRSSVLLQENSGLSAGGRCCINGASTVVTAIFGGI-LQNEV 324
Query: 129 RQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-K 187
+ TE K PFL L+ D+P K + P L L F + E
Sbjct: 325 NCLICGTESRKF----DPFLDLSLDIPSQFRNKRSKNQENGPTCTLRDCLRSFTDLEELD 380
Query: 188 EYKTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
E + Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 381 ETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMK 440
Query: 241 D-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWY 298
+L PE ++ E+ +YDL A +VH G +G Y + H+ G+W+
Sbjct: 441 CFLLEPE-------------NSRPENCLYDLAAVVVHHGSGVGSGHYTAYAAHE--GRWF 485
Query: 299 EIQDLHVTDILPQMITLTEAYIQIY 323
D VT + + +AYI Y
Sbjct: 486 HFNDSTVTLTDEETVLRAKAYILFY 510
>gi|363737872|ref|XP_413755.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gallus gallus]
Length = 520
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 137/332 (41%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 264
Query: 82 LSWFLNTLHRALNGT---------KKKDSSIVY--KTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G +++SS+ K + I L+ +V
Sbjct: 265 MRYLLDHLHLELQGGFNGVSRSVILQENSSLTASSKCCINGASTVVTAIFGGILQNEVNC 324
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P L L F + E E
Sbjct: 325 LICGTESRKF----DPFLDLSLDIPSQFRNKRTKNQENGPMCTLRDCLRSFTDLEELDET 380
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 381 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 440
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 441 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYAAHE--GRWFHF 485
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R S +
Sbjct: 486 NDSTVTLTDEETVVKAKAYILFYVERQAKSGS 517
>gi|345316872|ref|XP_003429803.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Ornithorhynchus
anatinus]
Length = 494
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 134/332 (40%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 183 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 238
Query: 82 LSWFLNTLHRALNGT-----------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G + S K + I L+ +V
Sbjct: 239 MRYLLDHLHLELQGGFNGVSRSVILQENSGLSASNKCCINGASTVVTAIFGGILQNEVNC 298
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 299 LICGTESRKF----DPFLDLSLDIPSQFRNKRSKNQENGPMCSLRDCLRSFTDLEELDET 354
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 355 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 414
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 415 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 459
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R S +
Sbjct: 460 NDSTVTLTDEETVVKAKAYILFYVERQAKSGS 491
>gi|67968614|dbj|BAE00666.1| unnamed protein product [Macaca fascicularis]
Length = 435
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 134/332 (40%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 124 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 179
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 180 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 239
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 240 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 295
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 296 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 355
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 356 LLEPE-------------NSGLESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 400
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R + +
Sbjct: 401 NDSTVTLTDEETVVKAKAYILFYVERQAKAGS 432
>gi|449472093|ref|XP_002191422.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Taeniopygia
guttata]
Length = 640
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 130/323 (40%), Gaps = 45/323 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW ++ SP + V+W F+ +Q D +F
Sbjct: 329 RSQGDNNVSLVEEFRKTLCALWQGN--QTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 384
Query: 82 LSWFLNTLHRALNGT-----------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G + S K + I L+ +V
Sbjct: 385 MRYLLDHLHLELQGGFNGVSRSVILQENSSLSASNKCCINGASTVVTAIFGGILQNEVNC 444
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P L L F + E E
Sbjct: 445 LICGTESRKF----DPFLDLSLDIPSQFRNKRTKNQESGPMCTLRDCLRSFTDLEELDET 500
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 501 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 560
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDLVA +VH G +G Y + H+ G+W+
Sbjct: 561 LLEPE-------------NSGPESCLYDLVAVVVHHGSGVGSGHYTAYAAHE--GRWFHF 605
Query: 301 QDLHVTDILPQMITLTEAYIQIY 323
D VT + + +AYI Y
Sbjct: 606 NDSTVTLTDEETVGKAKAYILFY 628
>gi|432901665|ref|XP_004076886.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Oryzias
latipes]
Length = 401
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 136/334 (40%), Gaps = 30/334 (8%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L + + LRDY LR ++ V ++ L++ F +L + LW N ++ +SP +
Sbjct: 76 CLSNTSELRDYCLRNVHRLDVN---NRTNAALMEEFAKLTQSLWTSVNIEA-ISPSDFRS 131
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+ + K F Q D +FL L+ LH +N + S V S + K++++
Sbjct: 132 EIQRVAPK-FVGCNQQDAQEFLRSLLDGLHNEVNRVTVRPRSSVEDFDHYSDEEKSKRMW 190
Query: 121 PVEL-EEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+ L E + L + K + T + + + P + + +V L L
Sbjct: 191 NLYLAREDSKVVDLFVGQLKSSLTCTVCGFRSTMFDPFWDLSIPIAQERPGEVTLKDCLR 250
Query: 180 KFNNES--EKEYK------TYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVN 231
F E + E K + KRF I P L++++KRF+ + K T VN
Sbjct: 251 LFTKEDVLDGEEKPTCNKCKARRKCTKRFSIQKFPQILVIHLKRFSDSNSRSSKLSTFVN 310
Query: 232 FPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYH 291
FP+K +D + + E +Y+L A H G G Y + +
Sbjct: 311 FPLKELD----------------LREFSADNSEHPVYNLYAVSNHTGNTLGGHYTAYCRN 354
Query: 292 KGIGKWYEIQDLHVTDILPQMITLTEAYIQIYEL 325
+G+WY D V+ I + + AY+ YEL
Sbjct: 355 PALGEWYSYNDSRVSPISSGQVRTSNAYVLFYEL 388
>gi|126277020|ref|XP_001366252.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Monodelphis
domestica]
Length = 520
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 134/332 (40%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 264
Query: 82 LSWFLNTLHRALNGT-----------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G + S K + I L+ +V
Sbjct: 265 MRYLLDHLHLELQGGFNGVSRSVILQENSSLSASNKCCINGASTVVTAIFGGILQNEVNC 324
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 325 LICGTESRKF----DPFLDLSLDIPSQFRNKRSKNQENGPLCSLRDCLRSFTDLEELDET 380
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 381 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 440
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 441 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 485
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R S +
Sbjct: 486 NDSTVTLTDEETVVKAKAYILFYVERQARSGS 517
>gi|449266379|gb|EMC77432.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Columba livia]
Length = 490
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 133/332 (40%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 179 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 234
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 235 MRYLLDHLHLELQGGFNGVSRSVILQENATLSASNKCCINGASTVVTAIFGGILQNEVNC 294
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P L L F + E E
Sbjct: 295 LICGTESRKF----DPFLDLSLDIPSQFRNKRTKNQENGPMCTLRDCLRSFTDLEELDET 350
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 351 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 410
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 411 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYAAHE--GRWFHF 455
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R S +
Sbjct: 456 NDSTVTLTDEETVVKAKAYILFYVERQAKSGS 487
>gi|226480822|emb|CAX73508.1| Ubiquitin carboxyl-terminal hydrolase 2 [Schistosoma japonicum]
Length = 496
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 139/351 (39%), Gaps = 57/351 (16%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L + PL +Y L E Y + + +L + + +LM+++W+P S SP
Sbjct: 177 CLSNTAPLTEYCL-EDRYLKDINKSSSMNGMLFRSYADLMKEIWDPDMANSSTSPSRFKS 235
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK------------------DSS 102
+ ++ + +++Q D +FL + L LH +N +K+ ++
Sbjct: 236 QIQRFAPRFMGYSQQ-DSQEFLRYVLEGLHMEVNRVQKRPIPTKPDYEAEDRLPDNEKAN 294
Query: 103 IVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETES----PFLYLTCDLPPPP 158
+ ++ +L + E+ + +L+ T E + +S PF L+ +P P
Sbjct: 295 LYWRRYLS--------MDNSEIVDLFVGQLMSTLECADCSFKSTTFDPFWDLSLPIPKKP 346
Query: 159 LFKDEVLENIIPQVNLYTILTKFNNESE---KEYKTYKENFLKRFEITSLPPYLILYVKR 215
NI+ +NL+T + + + KT + K F I P L+L++KR
Sbjct: 347 NV------NILDCLNLFTSKEELDGDERAICSRCKT-RRRCTKSFSIQKFPQILVLHLKR 399
Query: 216 FTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIV 275
F+ F K +V++P++N+D + T K S Y L A
Sbjct: 400 FSGERF-RSKMSVMVDYPLRNLDLIEFATSSCTQK--------------SAQYKLYAVSN 444
Query: 276 HDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
H G G Y + G W+ D HV I +E Y+ Y L+
Sbjct: 445 HSGSVYTGHYTASCLNPYTGDWHSFNDSHVHLISENSAISSEGYVLFYTLQ 495
>gi|21450103|ref|NP_659186.1| ubiquitin carboxyl-terminal hydrolase 3 [Mus musculus]
gi|30580632|sp|Q91W36.1|UBP3_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|16877850|gb|AAH17156.1| Ubiquitin specific peptidase 3 [Mus musculus]
gi|26327065|dbj|BAC27276.1| unnamed protein product [Mus musculus]
gi|148694176|gb|EDL26123.1| ubiquitin specific peptidase 3 [Mus musculus]
Length = 520
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 131/323 (40%), Gaps = 45/323 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GDS+ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 209 RSQGDSNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 264
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 265 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 324
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 325 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 380
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 381 ELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRNKVDTYVQFPLRGLDMKCY 440
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + +S +YDL A +VH G +G Y + H+ G+W+
Sbjct: 441 LLEPE-------------NSGPDSCLYDLAAVVVHHGSGVGSGHYTAYAVHE--GRWFHF 485
Query: 301 QDLHVTDILPQMITLTEAYIQIY 323
D VT + + +AYI Y
Sbjct: 486 NDSTVTVTDEETVGKAKAYILFY 508
>gi|291402890|ref|XP_002718220.1| PREDICTED: ubiquitin thiolesterase 3 [Oryctolagus cuniculus]
Length = 520
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 132/323 (40%), Gaps = 45/323 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD+S LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 209 RSQGDTSVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVIWKIMPNFRGYQQQDAHEF 264
Query: 82 LSWFLNTLHRAL----NGTKKKDSSIVYKTFLGSMKVKTRKIPPVE-------LEEKVRQ 130
+ + L+ LH L NG + T S K V L+ +V
Sbjct: 265 MRYLLDHLHLELQGGFNGVSRSAVLQENSTLSASSKCCVNGASTVVTAIFGGILQNEVNC 324
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 325 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 380
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 381 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 440
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + E+ +YDL A +VH G +G Y + H+ G+W+
Sbjct: 441 LLEPE-------------NSDPENCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 485
Query: 301 QDLHVTDILPQMITLTEAYIQIY 323
D VT + + +AYI Y
Sbjct: 486 NDSTVTLTDEETVGKAKAYILFY 508
>gi|344251056|gb|EGW07160.1| Ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus griseus]
Length = 435
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 135/332 (40%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GDS+ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 124 RSQGDSNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 179
Query: 82 LSWFLNTLHRALNGTKKK--DSSIVY---------KTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G SSI+ K + I L+ +V
Sbjct: 180 MRYLLDHLHLELQGGFNGVPRSSILQENSTLSANNKCCINGASTVVTAIFGGILQNEVNC 239
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 240 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQESGPVCSLRDCLRSFTDLEELDET 295
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 296 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 355
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 356 LLEPE-------------NIGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 400
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R + +
Sbjct: 401 NDSTVTVTDEETVGKAKAYILFYVERQARAGS 432
>gi|388453361|ref|NP_001252999.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|383423389|gb|AFH34908.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|384939762|gb|AFI33486.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
Length = 520
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 134/332 (40%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 264
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 265 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 324
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 325 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 380
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 381 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 440
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 441 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 485
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R + +
Sbjct: 486 NDSTVTLTDEETVVKAKAYILFYVERQAKAGS 517
>gi|332235883|ref|XP_003267134.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Nomascus leucogenys]
Length = 498
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 134/332 (40%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 187 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 242
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 243 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 302
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 303 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 358
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 359 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 418
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 419 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 463
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R + +
Sbjct: 464 NDSTVTLTDEETVVKAKAYILFYVERQAKAGS 495
>gi|395746826|ref|XP_003778518.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 498
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 134/332 (40%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 187 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 242
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 243 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 302
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 303 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 358
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 359 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 418
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 419 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 463
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R + +
Sbjct: 464 NDSTVTLTDEETVVKAKAYILFYVERQAKAGS 495
>gi|355692783|gb|EHH27386.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
gi|355778099|gb|EHH63135.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca
fascicularis]
Length = 490
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 134/332 (40%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 179 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 234
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 235 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 294
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 295 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 350
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 351 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 410
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 411 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 455
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R + +
Sbjct: 456 NDSTVTLTDEETVVKAKAYILFYVERQAKAGS 487
>gi|354474362|ref|XP_003499400.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus
griseus]
Length = 502
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 135/332 (40%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GDS+ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 191 RSQGDSNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 246
Query: 82 LSWFLNTLHRALNGTKKK--DSSIVY---------KTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G SSI+ K + I L+ +V
Sbjct: 247 MRYLLDHLHLELQGGFNGVPRSSILQENSTLSANNKCCINGASTVVTAIFGGILQNEVNC 306
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 307 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQESGPVCSLRDCLRSFTDLEELDET 362
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 363 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 422
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 423 LLEPE-------------NIGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 467
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R + +
Sbjct: 468 NDSTVTVTDEETVGKAKAYILFYVERQARAGS 499
>gi|380798287|gb|AFE71019.1| ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
Length = 491
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 134/332 (40%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 180 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 235
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 236 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 295
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 296 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 351
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 352 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 411
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 412 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 456
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R + +
Sbjct: 457 NDSTVTLTDEETVVKAKAYILFYVERQAKAGS 488
>gi|297696821|ref|XP_002825578.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pongo
abelii]
Length = 520
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 134/332 (40%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 264
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 265 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 324
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 325 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 380
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 381 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 440
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 441 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 485
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R + +
Sbjct: 486 NDSTVTLTDEETVVKAKAYILFYVERQAKAGS 517
>gi|332235881|ref|XP_003267133.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Nomascus leucogenys]
Length = 520
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 134/332 (40%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 264
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 265 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 324
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 325 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 380
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 381 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 440
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 441 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 485
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R + +
Sbjct: 486 NDSTVTLTDEETVVKAKAYILFYVERQAKAGS 517
>gi|256088992|ref|XP_002580603.1| ubiquitin-specific peptidase 2 (C19 family) [Schistosoma mansoni]
Length = 756
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 138/339 (40%), Gaps = 49/339 (14%)
Query: 8 LRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSR 67
L D FL++IN + + LL + +LM+++W+P S SP + ++
Sbjct: 191 LEDRFLKDINKS------SSMNGLLFHSYADLMKEIWDPDMANSSTSPSRFKSQIQRFAP 244
Query: 68 KQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIV----YKTFLGSMKVKTRKIPPVE 123
+ +++Q D +FL + L LH +N +K+ + I + + + R+ ++
Sbjct: 245 RFMGYSQQ-DSQEFLRYVLEGLHMEVNRVQKRPNPIKPDYEAEDYNEKANLYWRRYLSMD 303
Query: 124 LEEKVR---QRLLLTEEYKETETES----PFLYLTCDLPPPPLFKDEVLENIIPQVNLYT 176
E V +L+ T E E +S PF L+ +P K V +I+ +NL+T
Sbjct: 304 NSEIVDLFVGQLMSTLECGECSFKSTTFDPFWDLSLPIPK----KSNV--SILDCLNLFT 357
Query: 177 ILTKFNNESE---KEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFP 233
+ + KT + K F I P L+L++KRF+ F K +V++P
Sbjct: 358 SKEELDGNERPICSRCKT-RRRCAKSFSIQKFPQILVLHLKRFSGERF-RSKMSVMVDYP 415
Query: 234 VKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKG 293
++N+D T K S Y L A H G G Y +
Sbjct: 416 LRNLDLIGFATSSCTQK--------------SAQYKLYAVSNHSGSVYTGHYTASCLNPY 461
Query: 294 IGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
G W+ D HV I + E Y++ P+PT
Sbjct: 462 TGDWHSFNDSHVHAISENSVVSAEGYVE------NPAPT 494
>gi|90075368|dbj|BAE87364.1| unnamed protein product [Macaca fascicularis]
Length = 431
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 134/332 (40%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 120 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 175
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 176 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 235
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 236 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 291
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 292 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 351
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 352 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 396
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R + +
Sbjct: 397 NDSTVTLTDEETVVKAKAYILFYVERQAKAGS 428
>gi|395746828|ref|XP_003778519.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 431
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 134/332 (40%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 120 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 175
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 176 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 235
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 236 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 291
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 292 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 351
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 352 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 396
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R + +
Sbjct: 397 NDSTVTLTDEETVVKAKAYILFYVERQAKAGS 428
>gi|426233170|ref|XP_004010590.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Ovis
aries]
Length = 520
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 137/332 (41%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GDS+ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 209 RSQGDSNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 264
Query: 82 LSWFLNTLHRALNG--TKKKDSSIVYK--TFLGSMKVKTRKIPPVE-------LEEKVRQ 130
+ + L+ LH L G SSI+ + T S K V L+ +V
Sbjct: 265 MRYLLDHLHLELQGGFNGISRSSILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 324
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 325 LICGTESRKF----DPFLDLSLDIPSQFRNKRSKNQENGPTCSLRDCLRSFTDLEELDET 380
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 381 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 440
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + E+ +YDL A +VH G +G Y + H+ G+W+
Sbjct: 441 LLEPE-------------NSGPENCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 485
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + +AYI Y R + +
Sbjct: 486 NDSTVTLTDEDTVVKAKAYILFYVERQAKAGS 517
>gi|297696819|ref|XP_002825577.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Pongo
abelii]
gi|332235885|ref|XP_003267135.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3
[Nomascus leucogenys]
Length = 476
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 134/332 (40%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 165 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 220
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 221 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 280
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 281 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 336
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 337 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 396
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 397 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 441
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R + +
Sbjct: 442 NDSTVTLTDEETVVKAKAYILFYVERQAKAGS 473
>gi|426233172|ref|XP_004010591.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Ovis
aries]
Length = 476
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 137/332 (41%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GDS+ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 165 RSQGDSNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 220
Query: 82 LSWFLNTLHRALNG--TKKKDSSIVYK--TFLGSMKVKTRKIPPVE-------LEEKVRQ 130
+ + L+ LH L G SSI+ + T S K V L+ +V
Sbjct: 221 MRYLLDHLHLELQGGFNGISRSSILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 280
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 281 LICGTESRKF----DPFLDLSLDIPSQFRNKRSKNQENGPTCSLRDCLRSFTDLEELDET 336
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 337 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 396
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + E+ +YDL A +VH G +G Y + H+ G+W+
Sbjct: 397 LLEPE-------------NSGPENCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 441
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + +AYI Y R + +
Sbjct: 442 NDSTVTLTDEDTVVKAKAYILFYVERQAKAGS 473
>gi|7670525|dbj|BAA95110.1| unnamed protein product [Mus musculus]
Length = 393
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 143/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 72 CLSNTRELRDYCLQRL-YMRDLGHTSSAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 127
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ +F Q D +FL + L+ LH +N + + + K R+
Sbjct: 128 KTQIQRYA-PRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASPETLDHLPDEEKGRQ 186
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 187 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 246
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F + P L+L++KRF+++ K T
Sbjct: 247 MRLFTKEDILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTF 306
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 307 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 350
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 351 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 391
>gi|410212190|gb|JAA03314.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410255768|gb|JAA15851.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410292238|gb|JAA24719.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410334293|gb|JAA36093.1| ubiquitin specific peptidase 3 [Pan troglodytes]
Length = 520
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 131/323 (40%), Gaps = 45/323 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 264
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 265 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 324
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 325 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 380
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 381 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 440
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 441 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 485
Query: 301 QDLHVTDILPQMITLTEAYIQIY 323
D VT + + +AYI Y
Sbjct: 486 NDSTVTLTDEETVVKAKAYILFY 508
>gi|375493565|ref|NP_001243631.1| ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Homo sapiens]
Length = 476
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 131/323 (40%), Gaps = 45/323 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 165 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 220
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 221 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 280
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 281 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 336
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 337 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 396
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 397 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 441
Query: 301 QDLHVTDILPQMITLTEAYIQIY 323
D VT + + +AYI Y
Sbjct: 442 NDSTVTLTDEETVVKAKAYILFY 464
>gi|37674279|ref|NP_932759.1| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-45 [Mus
musculus]
gi|34874871|gb|AAQ83301.1| deubiquitinating enzyme Usp2-45 [Mus musculus]
gi|148693614|gb|EDL25561.1| ubiquitin specific peptidase 2, isoform CRA_b [Mus musculus]
Length = 396
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 143/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 75 CLSNTRELRDYCLQRL-YMRDLGHTSSAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 130
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ +F Q D +FL + L+ LH +N + + + K R+
Sbjct: 131 KTQIQRYA-PRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASPETLDHLPDEEKGRQ 189
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 190 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 249
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F + P L+L++KRF+++ K T
Sbjct: 250 MRLFTKEDILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTF 309
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 310 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 353
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 354 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 394
>gi|55770886|ref|NP_006528.2| ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Homo sapiens]
gi|205371844|sp|Q9Y6I4.2|UBP3_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|17390251|gb|AAH18113.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|30583377|gb|AAP35933.1| ubiquitin specific protease 3 [Homo sapiens]
gi|61359968|gb|AAX41792.1| ubiquitin specific protease 3 [synthetic construct]
gi|61359975|gb|AAX41793.1| ubiquitin specific protease 3 [synthetic construct]
gi|76828049|gb|AAI07138.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|76828053|gb|AAI07139.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|112180754|gb|AAH65300.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|119598057|gb|EAW77651.1| ubiquitin specific peptidase 3 [Homo sapiens]
gi|123980244|gb|ABM81951.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|123995059|gb|ABM85131.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|168277636|dbj|BAG10796.1| ubiquitin carboxyl-terminal hydrolase 3 [synthetic construct]
Length = 520
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 131/323 (40%), Gaps = 45/323 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 264
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 265 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 324
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 325 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 380
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 381 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 440
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 441 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 485
Query: 301 QDLHVTDILPQMITLTEAYIQIY 323
D VT + + +AYI Y
Sbjct: 486 NDSTVTLTDEETVVKAKAYILFY 508
>gi|47681481|gb|AAT37507.1| UBP protein [Homo sapiens]
Length = 498
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 131/323 (40%), Gaps = 45/323 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 187 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 242
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 243 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 302
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 303 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 358
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 359 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 418
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 419 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 463
Query: 301 QDLHVTDILPQMITLTEAYIQIY 323
D VT + + +AYI Y
Sbjct: 464 NDSTVTLTDEETVVKAKAYILFY 486
>gi|148693613|gb|EDL25560.1| ubiquitin specific peptidase 2, isoform CRA_a [Mus musculus]
Length = 411
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 143/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 90 CLSNTRELRDYCLQRL-YMRDLGHTSSAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 145
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ +F Q D +FL + L+ LH +N + + + K R+
Sbjct: 146 KTQIQRYA-PRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASPETLDHLPDEEKGRQ 204
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 205 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 264
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F + P L+L++KRF+++ K T
Sbjct: 265 MRLFTKEDILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTF 324
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 325 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 368
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 369 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 409
>gi|390363573|ref|XP_781718.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3
[Strongylocentrotus purpuratus]
Length = 503
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 137/310 (44%), Gaps = 50/310 (16%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSR-KQFQFTEQSDPIDFLSWFLNTLH 90
LV+ + + LW + ++ +SP + V+W +F+ +Q D +F+ + L+ LH
Sbjct: 204 LVEEIRKTLCALW--QGDQTAISPDSLF--TVMWKIFPRFRGYQQQDAHEFMRYLLDRLH 259
Query: 91 RALNG-----TKKKD----SSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKET 141
L G T KK ++IV F G + + P L +K+
Sbjct: 260 TELQGSTWPTTPKKQTNGHATIVSVIFGGLLLSEVTCRPCGSLYKKI------------- 306
Query: 142 ETESPFLYLTCDLPPP--PLFKDEVLENIIP-QVNLYTILTKFNNESEKEYKT----YKE 194
PFL ++ D+P P K++ + Q + + + E ++Y ++
Sbjct: 307 ---DPFLDVSLDIPERFRPRSKNKDGSQVCRLQDCMQSFIAVEELEETEQYMCPKCQQRQ 363
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYES 253
K+F + ++P L +++KRFT + F K T V FP+K +D +L PE + + S
Sbjct: 364 PSTKKFWLKAIPNVLCIHLKRFTWSGFLRTKIDTYVQFPMKGLDIQPFMLGPECQDENVS 423
Query: 254 TMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMI 313
T T+YDL A IVH G + + + + G+WY D VT + ++I
Sbjct: 424 T-----------TVYDLAAVIVHQGSGAGAGHYI-AFAVNNGQWYCFNDSTVTPVEEKVI 471
Query: 314 TLTEAYIQIY 323
T +AYI Y
Sbjct: 472 TRCKAYILFY 481
>gi|114657520|ref|XP_001173962.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pan
troglodytes]
Length = 498
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 131/323 (40%), Gaps = 45/323 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 187 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 242
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 243 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 302
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 303 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 358
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 359 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 418
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 419 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 463
Query: 301 QDLHVTDILPQMITLTEAYIQIY 323
D VT + + +AYI Y
Sbjct: 464 NDSTVTLTDEETVVKAKAYILFY 486
>gi|194212776|ref|XP_001501250.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Equus
caballus]
Length = 606
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 144/341 (42%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ L++ F +L++ +W +P + VSP E
Sbjct: 285 CLSNTRELRDYCLQRL-YMRDLSHSSNAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 340
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 341 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTVRPKSNPENLDHLPDDEKGRQ 399
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 400 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 459
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 460 MRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 519
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 520 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 563
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 564 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 604
>gi|323305107|gb|EGA58857.1| Sad1p [Saccharomyces cerevisiae FostersB]
Length = 362
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 131/298 (43%), Gaps = 71/298 (23%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
+ H+ P+RD+FL +N+ D+ ++R ++K+W+P+ FK H+S +
Sbjct: 71 ISHMVPVRDHFL--LNHF-------DNQGEFIKRLSICVKKIWSPKLFKHHLSVDDFXSY 121
Query: 62 VVLWSRKQFQFTEQSDPID---FLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ + R+ +PID FL W N + + N K SI+ + G +K+ +
Sbjct: 122 LKV--REGLNL----NPIDPRLFLLWLFNKICXSSNXLK----SILNHSCKGKVKIAKVE 171
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
P E E V ++++ PF LT DLP F+D + +PQ+N+ +L
Sbjct: 172 XKP-EASESVTGKVIV----------KPFWVLTLDLPEFSPFEDGNSVDDLPQINITKLL 220
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVD 238
TKF T FE+T LP +LI + RF +N+ + PVKN +
Sbjct: 221 TKFTKSRSSSTSTV-------FELTRLPQFLIFHFNRFDRNS----------DHPVKNRN 263
Query: 239 FGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVH--------DGEPSNGTYRVH 288
+ ++ S + +++ KY L AN+VH DG NG + H
Sbjct: 264 -------QTLVEFSSEL-EILHVKYR-----LKANVVHVVIKQPSTDGNAFNGDEKSH 308
>gi|3386552|gb|AAC28393.1| ubiquitin-specific protease UBP41 [Mus musculus]
Length = 353
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 143/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 32 CLSNTRELRDYCLQRL-YMRDLGHTSSAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 87
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ +F Q D +FL + L+ LH +N + + + K R+
Sbjct: 88 KTQIQRYA-PRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASPETLDHLPDEEKGRQ 146
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 147 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 206
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F + P L+L++KRF+++ K T
Sbjct: 207 MRLFTKEDILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTF 266
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 267 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 310
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 311 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 351
>gi|53987037|gb|AAV27298.1| poly-histidine-tagged Usp2-cc [Ubiquitin protease vector pHUsp2-cc]
Length = 378
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 143/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 57 CLSNTRELRDYCLQRL-YMRDLGHTSSAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 112
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ +F Q D +FL + L+ LH +N + + + K R+
Sbjct: 113 KTQIQRYA-PRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASPETLDHLPDEEKGRQ 171
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 172 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 231
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F + P L+L++KRF+++ K T
Sbjct: 232 MRLFTKEDILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTF 291
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 292 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 335
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 336 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 376
>gi|410961062|ref|XP_003987104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Felis catus]
Length = 503
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 137/332 (41%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 192 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 247
Query: 82 LSWFLNTLHRALNG--TKKKDSSIVYK--TFLGSMKVKTRKIPPVE-------LEEKVRQ 130
+ + L+ LH L G S+I+ + GS K V L+ +V
Sbjct: 248 MRYLLDHLHLELQGGFNGVSRSAILQENSALSGSNKCCINGASTVVTAIFGGILQNEVNC 307
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 308 LICGTESRKF----DPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDET 363
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 364 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 423
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 424 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 468
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + +AYI Y R + +
Sbjct: 469 NDSTVTLTDEDTVVKAKAYILFYVERQAKAGS 500
>gi|354504737|ref|XP_003514430.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 4
[Cricetulus griseus]
Length = 396
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 145/341 (42%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ L++ F +L++ +W +P + VSP E
Sbjct: 75 CLSNTRELRDYCLQRL-YMRDLGHTSNAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 130
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + K R+
Sbjct: 131 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTVRPKPSPENLDHLPDDEKGRQ 189
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 190 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 249
Query: 178 LTKFNNE----SEKEYKTYK----ENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E +++ Y+ + +K+F + P L+L++KRF+++ K T
Sbjct: 250 MRLFTKEDVLDGDEKPTCYRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTF 309
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 310 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 353
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 354 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 394
>gi|397515506|ref|XP_003827991.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 3 [Pan paniscus]
Length = 501
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 131/323 (40%), Gaps = 45/323 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 190 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 245
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 246 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 305
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 306 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 361
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 362 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 421
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 422 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 466
Query: 301 QDLHVTDILPQMITLTEAYIQIY 323
D VT + + +AYI Y
Sbjct: 467 NDSTVTLTDEETVVKAKAYILFY 489
>gi|395848444|ref|XP_003796860.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Otolemur
garnettii]
Length = 606
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 143/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 285 CLSNTRELRDYCLQRL-YMRDLSHGSSAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 340
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 341 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVAPRPKSNPENLDHLPDDEKGRQ 399
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 400 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 459
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 460 MRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 519
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 520 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 563
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 564 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 604
>gi|126326536|ref|XP_001370349.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1
[Monodelphis domestica]
Length = 600
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 142/339 (41%), Gaps = 28/339 (8%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L + LRDY L+ + Y R + L++ F +L++ +W + VSP E
Sbjct: 279 CLSNTRELRDYCLQRL-YLRDLNSSSHAHTALMEEFAKLIQTIWT-SSANDVVSPSEFKT 336
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+ ++ + + +Q D +FL + L+ LH +N + S + K R++
Sbjct: 337 QIQRFAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTVRPKSNPENLDHLPDEEKGRQMW 395
Query: 121 PVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
LE E R L + K + T + Y + P + + P+V L +
Sbjct: 396 RKYLEREDSRIGDLFVGQLKSSLTCTECGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMR 455
Query: 180 KFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVN 231
F E EK ++ +K+F I P L+L++KRF+++ K T VN
Sbjct: 456 LFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQKFPKILVLHLKRFSESRIRTSKLTTFVN 515
Query: 232 FPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYH 291
FP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 516 FPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYCRS 559
Query: 292 KGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 560 PVTGEWHTFNDSSVTPMSSSQVRSSDAYLLFYELASPPS 598
>gi|395502639|ref|XP_003755686.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Sarcophilus
harrisii]
Length = 711
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 134/332 (40%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 400 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 455
Query: 82 LSWFLNTLHRALNGT-----------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G + S K + I L+ +V
Sbjct: 456 MRYLLDHLHLELQGGFNGVSRSVILQENSSLSASNKCCINGASTVVTAIFGGILQNEVNC 515
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 516 LICGTESRKF----DPFLDLSLDIPSQFRNKRSKNQENGPLCSLRDCLRSFTDLEELDET 571
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 572 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 631
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 632 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 676
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R S +
Sbjct: 677 NDSTVTLTDEETVVKAKAYILFYVERQARSGS 708
>gi|114052498|ref|NP_932760.2| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-69 [Mus
musculus]
gi|114052502|ref|NP_058088.2| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-69 [Mus
musculus]
gi|17028406|gb|AAH17517.1| Ubiquitin specific peptidase 2 [Mus musculus]
gi|34874899|gb|AAQ83302.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
gi|34874937|gb|AAQ83304.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
gi|74218334|dbj|BAE23782.1| unnamed protein product [Mus musculus]
Length = 619
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 143/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 298 CLSNTRELRDYCLQRL-YMRDLGHTSSAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 353
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ +F Q D +FL + L+ LH +N + + + K R+
Sbjct: 354 KTQIQRYA-PRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASPETLDHLPDEEKGRQ 412
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 413 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 472
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F + P L+L++KRF+++ K T
Sbjct: 473 MRLFTKEDILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTF 532
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 533 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 576
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 577 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 617
>gi|114152901|sp|O88623.2|UBP2_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|34874927|gb|AAQ83303.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
Length = 613
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 143/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 292 CLSNTRELRDYCLQRL-YMRDLGHTSSAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 347
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ +F Q D +FL + L+ LH +N + + + K R+
Sbjct: 348 KTQIQRYA-PRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKASPETLDHLPDEEKGRQ 406
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 407 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 466
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F + P L+L++KRF+++ K T
Sbjct: 467 MRLFTKEDILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTF 526
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 527 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 570
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 571 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 611
>gi|195998894|ref|XP_002109315.1| hypothetical protein TRIADDRAFT_53214 [Trichoplax adhaerens]
gi|190587439|gb|EDV27481.1| hypothetical protein TRIADDRAFT_53214 [Trichoplax adhaerens]
Length = 813
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K +IT LP L L++KRF +++ K VNFP+ ++ L
Sbjct: 476 NGIKYSKITHLPEILCLHLKRFKHDSYSTSKINCSVNFPLTGLEMKSFLN---------- 525
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
K +ST YDLVA I H G G Y + + +WYE D++VT++ + +
Sbjct: 526 ----TGHKIQSTTYDLVAIISHHGAAGGGHYVCYALNCINHRWYEYDDINVTEVADEFVL 581
Query: 315 LTEAYIQIYELRTTP 329
EAY+ Y +TP
Sbjct: 582 SVEAYVLFYRKSSTP 596
>gi|354504731|ref|XP_003514427.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Cricetulus griseus]
gi|354504733|ref|XP_003514428.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Cricetulus griseus]
gi|354504735|ref|XP_003514429.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 3
[Cricetulus griseus]
Length = 613
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 145/341 (42%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ L++ F +L++ +W +P + VSP E
Sbjct: 292 CLSNTRELRDYCLQRL-YMRDLGHTSNAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 347
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + K R+
Sbjct: 348 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTVRPKPSPENLDHLPDDEKGRQ 406
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 407 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 466
Query: 178 LTKFNNE----SEKEYKTYK----ENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E +++ Y+ + +K+F + P L+L++KRF+++ K T
Sbjct: 467 MRLFTKEDVLDGDEKPTCYRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTF 526
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 527 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 570
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 571 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 611
>gi|349603765|gb|AEP99510.1| Ubiquitin carboxyl-terminal hydrolase 8-like protein, partial
[Equus caballus]
Length = 394
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 145/351 (41%), Gaps = 47/351 (13%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 70 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQ--YRYISP 123
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIV 104
+ + + QF Q D + L + ++ LH LN + D
Sbjct: 124 KD-FKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKA 182
Query: 105 YKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEV 164
+ K I + + + + +K++ T F+YL+ LP K
Sbjct: 183 AEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLS--LPLASTSK-CT 239
Query: 165 LENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVE 224
L++ + + LT NN + + + LK+ EI LPP L++++KRF+ + + +
Sbjct: 240 LQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 298
Query: 225 KNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNG 283
K T V+FP++N+D ++ P+ K Y+L + H G G
Sbjct: 299 KLQTSVDFPLENLDLSQYVIGPKNNLK----------------KYNLFSVSNHYGGLDGG 342
Query: 284 TYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTAM 334
Y + + +W++ D V+DI + + AYI Y T+ P A+
Sbjct: 343 HYTAYCKNAARQRWFKFDDHEVSDIAVSSVKSSAAYILFY---TSLGPRAI 390
>gi|344240807|gb|EGV96910.1| Ubiquitin carboxyl-terminal hydrolase 2 [Cricetulus griseus]
Length = 379
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 145/341 (42%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ L++ F +L++ +W +P + VSP E
Sbjct: 58 CLSNTRELRDYCLQRL-YMRDLGHTSNAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 113
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + K R+
Sbjct: 114 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTVRPKPSPENLDHLPDDEKGRQ 172
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 173 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 232
Query: 178 LTKFNNE----SEKEYKTYK----ENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E +++ Y+ + +K+F + P L+L++KRF+++ K T
Sbjct: 233 MRLFTKEDVLDGDEKPTCYRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTF 292
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 293 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 336
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 337 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 377
>gi|395520122|ref|XP_003764186.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Sarcophilus
harrisii]
Length = 599
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 142/339 (41%), Gaps = 28/339 (8%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L + LRDY L+ + Y R + L++ F +L++ +W + VSP E
Sbjct: 278 CLSNTRELRDYCLQRL-YLRDLNSSSHAHTALMEEFAKLIQTIWT-SSANDVVSPSEFKT 335
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+ ++ + + +Q D +FL + L+ LH +N + S + K R++
Sbjct: 336 QIQRFAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTVRPKSNPENLDHLPDEEKGRQMW 394
Query: 121 PVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
LE E R L + K + T + Y + P + + P+V L +
Sbjct: 395 RKYLEREDSRIGDLFVGQLKSSLTCTECGYCSTVFDPFWDLSLPIAKRGYPEVTLMDCMR 454
Query: 180 KFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVN 231
F E EK ++ +K+F I P L+L++KRF+++ K T VN
Sbjct: 455 LFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQKFPKILVLHLKRFSESRIRTSKLTTFVN 514
Query: 232 FPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYH 291
FP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 515 FPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYCRS 558
Query: 292 KGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 559 PVTGEWHTFNDSSVTPMSSSQVRSSDAYLLFYELASPPS 597
>gi|194376096|dbj|BAG62807.1| unnamed protein product [Homo sapiens]
Length = 476
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 131/323 (40%), Gaps = 45/323 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 165 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 220
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 221 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 280
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 281 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 336
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 337 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 396
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 397 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYIAYATHE--GRWFHF 441
Query: 301 QDLHVTDILPQMITLTEAYIQIY 323
D VT + + +AYI Y
Sbjct: 442 NDSTVTLTDEETVVKAKAYILFY 464
>gi|403298210|ref|XP_003939924.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Saimiri
boliviensis boliviensis]
Length = 498
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 134/332 (40%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 187 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 242
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 243 MRYLLDHLHLELQGGFNGVSRSTILQENSALSASNKCCINGASTVVTAIFGGILQNEVNC 302
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 303 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 358
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 359 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 418
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + +S +YDL A +VH G +G Y + H+ G+W+
Sbjct: 419 LLEPE-------------NSGPDSCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 463
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R + +
Sbjct: 464 NDSTVTLTDEETVVKAKAYILFYVERQAKAGS 495
>gi|410915022|ref|XP_003970986.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Takifugu
rubripes]
Length = 395
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 150/348 (43%), Gaps = 49/348 (14%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGD---SSFLLVQRFGELMRKLWNPRNFKSHVSPHE 57
L + LRDY L ++ + GD ++ L++ F +L++ L + ++ +SP +
Sbjct: 67 CLSNTPDLRDYCLTNVHRLDL----GDNCTANTTLMEEFAKLIQSLCLSGSNEA-ISPSD 121
Query: 58 MLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKT------FLGS 111
+ + + + K F Q D +FL + L+ LH +N +S++ K LG
Sbjct: 122 VWKQIQQYGPK-FVGCNQQDAQEFLRFLLDGLHNDVN-----RASVLPKVSGHDNDHLGD 175
Query: 112 MKVKTRKIPPVELE-EKVRQRLLLTEEYKETETES----------PFLYLTCDLPPPPLF 160
+ K++++ + LE E + L + K + T + PF L+ +P
Sbjct: 176 DE-KSKRMWNLYLEREDSKVVDLFVGQLKSSVTCTFCGFTSTVFDPFWDLSIPIPAQKSS 234
Query: 161 KDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNT 220
++ L++ + +L + K+ ++ KRF I P L+L++KRF+ ++
Sbjct: 235 EEVTLKDCLRLFTKEDVLDGDESPMCCRCKSRRK-CTKRFSIQRFPQILVLHLKRFSDSS 293
Query: 221 FFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP 280
K T VNFP+K ++ M + E YDL A H G
Sbjct: 294 VRTSKLSTYVNFPLKELE----------------MREFATTGGERVTYDLYAVSNHSGNA 337
Query: 281 SNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTT 328
G Y + H +G+WY D V+ + I + AY+ YEL+++
Sbjct: 338 MGGHYTAYCRHPSLGEWYSYNDSRVSPVSTANIRSSNAYLLFYELQSS 385
>gi|301756532|ref|XP_002914115.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Ailuropoda
melanoleuca]
gi|281347816|gb|EFB23400.1| hypothetical protein PANDA_001954 [Ailuropoda melanoleuca]
Length = 606
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 143/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 285 CLSNTRELRDYCLQRL-YMRDLSHSSNVHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 340
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 341 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTVRPKSNPENLDHLPDDEKGRQ 399
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 400 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 459
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 460 MRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 519
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 520 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 563
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 564 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 604
>gi|432092259|gb|ELK24883.1| Ubiquitin carboxyl-terminal hydrolase 3 [Myotis davidii]
Length = 449
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 131/326 (40%), Gaps = 45/326 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 138 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 193
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 194 MRYLLDHLHLELQGGFNGVSCSPILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 253
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 254 LICGTESRKF----DPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDET 309
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 310 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 369
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + E+ +YDL A +VH G +G Y + H+ G+W+
Sbjct: 370 LLEPE-------------NSGPENCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 414
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
D VT + +AYI Y R
Sbjct: 415 NDSTVTLTEEDTVVKAKAYILFYAER 440
>gi|6573163|gb|AAF17574.1| ubiquitin specific processing protease [Rattus norvegicus]
Length = 618
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 145/359 (40%), Gaps = 68/359 (18%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 297 CLSNTRELRDYCLQRL-YMRDLGHTSSAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 352
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N +V R
Sbjct: 353 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVN------------------RVAARP 393
Query: 119 IPPVEL------EEKVRQ-----------RL--LLTEEYKETETESPFLYLTCDLPPPPL 159
P E EEK RQ R+ L + K + T + Y + P
Sbjct: 394 KPSPESLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWD 453
Query: 160 FKDEVLENIIPQVNLYTILTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLIL 211
+ + P+V L + F E EK ++ +K+F + P L+L
Sbjct: 454 LSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVL 513
Query: 212 YVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLV 271
++KRF+++ K T VNFP++++D + + E+T + +Y+L
Sbjct: 514 HLKRFSESRIRTSKLTTFVNFPLRDLDLREFAS-------ENTNH---------AVYNLY 557
Query: 272 ANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
A H G G Y + G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 558 AVSNHSGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 616
>gi|345799830|ref|XP_003434615.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Canis lupus
familiaris]
Length = 395
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 143/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 74 CLSNTRELRDYCLQRL-YMRDLSHSSNVHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 129
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 130 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTVRPKSNPENLDHLPDDEKGRQ 188
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 189 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLTDC 248
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 249 MRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 308
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 309 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 352
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 353 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 393
>gi|405972649|gb|EKC37407.1| Ubiquitin carboxyl-terminal hydrolase 3 [Crassostrea gigas]
Length = 479
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 141/346 (40%), Gaps = 55/346 (15%)
Query: 13 LREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQF 72
+++I + K P D LLV+ + + LW + K +SP E L AV+ +F+
Sbjct: 161 VKKIQTRKSKTPEED--VLLVEELRKTLCALW--QGSKGAISP-ESLFAVIWKVVPRFRG 215
Query: 73 TEQSDPIDFLSWFLNTLHRAL-------------NGTKKKDSSIVYKTFLGSMKVKTRKI 119
+Q D +F+ + L+ LH L G K K S+IV F G
Sbjct: 216 YQQQDAHEFMRYLLDRLHTELLTLLPYPNSDSPFIGPKGK-STIVTAIFGGL-------- 266
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKD-EVLENIIPQVNLYTIL 178
L+ +V + E K PFL L+ D+P + + + + L L
Sbjct: 267 ----LQNEVTCLVCGVESKKH----DPFLDLSLDIPQQFCTRGVKAKDGEQLRCTLSDCL 318
Query: 179 TKFNNESEKEYKTY--------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIV 230
F E E K+ K+F I LP L L++KRF +FF K T V
Sbjct: 319 QSFTELEELEESELYMCSTCKKKQRSTKKFWIRRLPNVLCLHIKRFRWQSFFRVKLETFV 378
Query: 231 NFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS-NGTYRVHL 289
FP++ ++ + +++ + S YDL A +VH G + +G Y +
Sbjct: 379 EFPLEGLNMHKYIL--------DNLHETRGSGSGSNEYDLAAVVVHHGSGAGSGHYTSYA 430
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTAMS 335
H+ G+W+ D VT P+ + +AYI Y R P +S
Sbjct: 431 RHE--GQWFHFNDSTVTPCEPETVAKCKAYILFYIRRQFKVPDYLS 474
>gi|301756861|ref|XP_002914278.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Ailuropoda
melanoleuca]
gi|281347308|gb|EFB22892.1| hypothetical protein PANDA_002153 [Ailuropoda melanoleuca]
Length = 520
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 129/323 (39%), Gaps = 45/323 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 264
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 265 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 324
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKE-- 188
+ TE K PFL L+ D+P K + P +L L F + E +
Sbjct: 325 LICGTESRKF----DPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDET 380
Query: 189 --YKTYK----ENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
Y ++ + K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 381 ELYMCHRCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 440
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + E +YDL A +VH G +G Y + H+ G+W+
Sbjct: 441 LLEPE-------------NSGPEHCLYDLAAVVVHHGSGVGSGHYTAYAAHE--GRWFHF 485
Query: 301 QDLHVTDILPQMITLTEAYIQIY 323
D VT + +AYI Y
Sbjct: 486 NDSTVTLTDEDTVVKAKAYILFY 508
>gi|6573165|gb|AAF17575.1| testis ubiquitin specific processing protease [Rattus norvegicus]
gi|149041436|gb|EDL95277.1| ubiquitin specific peptidase 2, isoform CRA_c [Rattus norvegicus]
Length = 396
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 143/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 75 CLSNTRELRDYCLQRL-YMRDLGHTSSAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 130
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + + K R+
Sbjct: 131 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVAARPKPSPESLDHLPDEEKGRQ 189
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 190 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 249
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F + P L+L++KRF+++ K T
Sbjct: 250 MRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTF 309
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 310 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 353
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 354 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 394
>gi|70794797|ref|NP_001020595.1| ubiquitin carboxyl-terminal hydrolase 3 [Rattus norvegicus]
gi|68480670|gb|AAY97907.1| ubiquitin specific protease 3 [Rattus norvegicus]
Length = 520
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 129/323 (39%), Gaps = 45/323 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GDS+ LV+ F + + LW + ++ SP + V+W F+ Q D +F
Sbjct: 209 RSQGDSNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYRQQDAHEF 264
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 265 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSANNKCCINGASTVVTTIFGGILQNEVNC 324
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 325 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 380
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 381 ELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRNKVDTYVQFPLRGLDMKCY 440
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + +S +YDL A VH G +G Y + H+ G+W+
Sbjct: 441 LLEPE-------------NSGPDSCLYDLAAVFVHHGSGVGSGHYTAYAVHE--GRWFHF 485
Query: 301 QDLHVTDILPQMITLTEAYIQIY 323
D VT + + +AYI Y
Sbjct: 486 NDSTVTVTDEETVGKAKAYILFY 508
>gi|81883550|sp|Q5U349.1|UBP2_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2; AltName:
Full=Ubiquitin-specific-processing protease testis;
Short=UBP-t
gi|55250569|gb|AAH85719.1| Ubiquitin specific peptidase 2 [Rattus norvegicus]
gi|149041433|gb|EDL95274.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
gi|149041435|gb|EDL95276.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
Length = 618
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 145/359 (40%), Gaps = 68/359 (18%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 297 CLSNTRELRDYCLQRL-YMRDLGHTSSAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 352
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N +V R
Sbjct: 353 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVN------------------RVAARP 393
Query: 119 IPPVEL------EEKVRQ-----------RL--LLTEEYKETETESPFLYLTCDLPPPPL 159
P E EEK RQ R+ L + K + T + Y + P
Sbjct: 394 KPSPESLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWD 453
Query: 160 FKDEVLENIIPQVNLYTILTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLIL 211
+ + P+V L + F E EK ++ +K+F + P L+L
Sbjct: 454 LSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVL 513
Query: 212 YVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLV 271
++KRF+++ K T VNFP++++D + + E+T + +Y+L
Sbjct: 514 HLKRFSESRIRTSKLTTFVNFPLRDLDLREFAS-------ENTNH---------AVYNLY 557
Query: 272 ANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
A H G G Y + G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 558 AVSNHSGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 616
>gi|426370762|ref|XP_004052330.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Gorilla gorilla
gorilla]
Length = 355
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 142/341 (41%), Gaps = 39/341 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ LV+ F +L++ +W +P + VSP E
Sbjct: 41 CLSNTRELRDYCLQRL-YMRDLHHGSNAHTALVEEFAKLIQTIWTSSPNDV---VSPSEF 96
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 97 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQ 155
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 156 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 215
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 216 MRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 275
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 276 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 319
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G G+W+ D + ++AY+ YEL + PS
Sbjct: 320 RSPGTGEWHTFND-------SSQVRTSDAYLLFYELASPPS 353
>gi|73954632|ref|XP_859639.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Canis
lupus familiaris]
Length = 606
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 143/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 285 CLSNTRELRDYCLQRL-YMRDLSHSSNVHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 340
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 341 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTVRPKSNPENLDHLPDDEKGRQ 399
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 400 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLTDC 459
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 460 MRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 519
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 520 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 563
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 564 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 604
>gi|395822291|ref|XP_003784454.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Otolemur garnettii]
Length = 520
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 141/333 (42%), Gaps = 47/333 (14%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 264
Query: 82 LSWFLNTLHRAL----NGTK-----KKDSSIVYK---TFLGSMKVKTRKIPPVELEEKVR 129
+ + L+ LH L NG +++S++ GS V T + L+ +V
Sbjct: 265 MRYLLDHLHLELQDGFNGVSHSAILQENSTLSTSNKCCINGSSTVVTAIFGGI-LQNEVN 323
Query: 130 QRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KE 188
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 324 CLICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDE 379
Query: 189 YKTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 380 TELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKC 439
Query: 242 -ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYE 299
+L PE + E+ +YDL A +VH G +G Y + H+ G+W+
Sbjct: 440 YLLEPE-------------NSGPENCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFH 484
Query: 300 IQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R + +
Sbjct: 485 FNDSTVTLTDEETVVKAKAYILFYVERQAKAGS 517
>gi|348574069|ref|XP_003472813.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Cavia porcellus]
Length = 396
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 141/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWN--PRNFKSHVSPHEM 58
L + LRDY L+ + Y R L++ F +L++ +W P + VSP E
Sbjct: 75 CLSNTRELRDYCLQRL-YMRDLSHTSSVHTGLMEEFAKLIQTIWTSCPNDV---VSPSEF 130
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 131 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVAVRPKSSHENLDHLPDDEKGRQ 189
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 190 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 249
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 250 MRLFTKEDILDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLSTF 309
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 310 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 353
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 354 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 394
>gi|410972085|ref|XP_003992491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Felis catus]
Length = 606
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 142/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R L++ F +L++ +W +P + VSP E
Sbjct: 285 CLSNTRELRDYCLQRL-YMRDLSHGSSVHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 340
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 341 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTVRPKSNPENLDHLPDDEKGRQ 399
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 400 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 459
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 460 MRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 519
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 520 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 563
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 564 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 604
>gi|340368234|ref|XP_003382657.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Amphimedon
queenslandica]
Length = 884
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 15/130 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ +P L++++KRF+ N +F K + V FP++N+D D +
Sbjct: 709 KKFDLWKMPEILVIHLKRFSYNRYFRNKIESKVEFPLENLDLSDYV-------------- 754
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
V + +YDL A H G G Y + +K GKWY D HV++ P+ I +
Sbjct: 755 -VNQEEPQPLYDLFAVSNHFGGLGGGHYTAYAKNKDNGKWYSFDDSHVSEASPESICSSA 813
Query: 318 AYIQIYELRT 327
+Y+ Y+ +T
Sbjct: 814 SYLLFYQRKT 823
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 80/175 (45%), Gaps = 24/175 (13%)
Query: 1 ALCHVTPLRDYFLREINYARV-------KRPPGDSSFLLVQRFGELMRKLWNPRNFKSHV 53
L + PL +YF+ + A + P ++ + +G L+ ++WN +N S++
Sbjct: 324 CLGNTKPLVEYFIGKEGEAEKPYKKHINRNNPLGMGGVIAETYGSLLDEMWNGQN--SYL 381
Query: 54 SPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-------------D 100
+P + + ++ QF Q D + L++ L+ LH LN KKK D
Sbjct: 382 APRQ-FKNIIGRHAPQFSGYSQHDSHELLAFLLDGLHEDLNLVKKKPYVDMDIKTDGRDD 440
Query: 101 SSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLP 155
+ I +T+L ++ + + + + +++ L + KE+ PF+YL+ LP
Sbjct: 441 NDIARETWLKYLQ-RNQSVIVRLFQGQLKSTLHCPKCDKESRIFDPFMYLSLPLP 494
>gi|395822293|ref|XP_003784455.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Otolemur garnettii]
Length = 476
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 141/333 (42%), Gaps = 47/333 (14%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 165 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 220
Query: 82 LSWFLNTLHRAL----NGTK-----KKDSSIVYK---TFLGSMKVKTRKIPPVELEEKVR 129
+ + L+ LH L NG +++S++ GS V T + L+ +V
Sbjct: 221 MRYLLDHLHLELQDGFNGVSHSAILQENSTLSTSNKCCINGSSTVVTAIFGGI-LQNEVN 279
Query: 130 QRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KE 188
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 280 CLICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDE 335
Query: 189 YKTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 336 TELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKC 395
Query: 242 -ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYE 299
+L PE + E+ +YDL A +VH G +G Y + H+ G+W+
Sbjct: 396 YLLEPE-------------NSGPENCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFH 440
Query: 300 IQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R + +
Sbjct: 441 FNDSTVTLTDEETVVKAKAYILFYVERQAKAGS 473
>gi|402874529|ref|XP_003901088.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Papio
anubis]
Length = 351
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 40 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 95
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 96 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 155
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P + L F + E E
Sbjct: 156 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCWVRDCLRSFTDLEELDET 211
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 212 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 271
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 272 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 316
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R + +
Sbjct: 317 NDSTVTLTDEETVVKAKAYILFYVERQAKAGS 348
>gi|355727980|gb|AES09374.1| ubiquitin specific peptidase 3 [Mustela putorius furo]
Length = 472
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 132/332 (39%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 161 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 216
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 217 MRYLLDHLHLELQGGFNGVSRSAILQENSALSASNKCCINGASTVVTAIFGGILQNEVNC 276
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 277 LICGTESRKF----DPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDET 332
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 333 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 392
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + E +YDL A +VH G +G Y + H+ G+W+
Sbjct: 393 LLEPE-------------NSGPEHCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 437
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + +AYI Y R + +
Sbjct: 438 NDSTVTLTDEDTVVKAKAYILFYVERQAKAGS 469
>gi|328711432|ref|XP_003244535.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like
[Acyrthosiphon pisum]
Length = 571
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 131/293 (44%), Gaps = 41/293 (13%)
Query: 49 FKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK--------- 99
F+ +SP LQ +V + +++ Q D +FL + L+TLH L K K
Sbjct: 292 FREAISP-AALQQIVCKIKPRYKGYHQHDAHEFLMFTLDTLHNELTREKSKLLLEEGITH 350
Query: 100 ------DS--SIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLT 151
D+ S++++ FL S + P ++ L +Y E E P +
Sbjct: 351 HNPSKIDTLVSLMFRGFLLSEVYCLKCNTPYRKRDEFTDISLDVPDY---EDEDPSVSRP 407
Query: 152 CDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLIL 211
DL L + +E + + N Y F + EK K+ KRF + ++P L L
Sbjct: 408 VDLLSDCLERYFEIEEL-NERNFY-----FCEKCEKPQKS-----TKRFWMNAVPNILCL 456
Query: 212 YVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLV 271
++KRF ++ + K T + FP++++D ++P + + T + ++ M+DLV
Sbjct: 457 HLKRFRWDSTYRTKVHTFIQFPMQSLD----MSPYYDDEMKKTQF----VGKDTNMFDLV 508
Query: 272 ANIVHDGEP-SNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
A +VHDGE +G Y + G+WYE D V ++ + +AY+ Y
Sbjct: 509 AVVVHDGEGVGSGHYTSYAVDSTEGQWYEYNDEKVHEVDASFVENVQAYLLFY 561
>gi|6492124|gb|AAF14189.1|AF106658_1 deubiquitinating enzyme Ubp45 [Rattus norvegicus]
Length = 396
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 143/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 75 CLSNTRELRDYCLQRL-YMRDLGHTSSAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 130
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + + K R+
Sbjct: 131 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVAARPKPSPESLDHLPDEEKGRQ 189
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 190 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 249
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F + P L+L++KRF+++ K T
Sbjct: 250 MRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTF 309
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 310 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 353
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 354 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLFFYELASPPS 394
>gi|326430318|gb|EGD75888.1| hypothetical protein PTSG_11617 [Salpingoeca sp. ATCC 50818]
Length = 1046
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 22/172 (12%)
Query: 162 DEVLENIIP---QVNLYTILTKFNNESEKEYKTYKE--NFLKRFEITSLPPYLILYVKRF 216
DEV +P ++ YT + +++ KE K+ E+ LP L++++KRF
Sbjct: 824 DEVTNGAVPLTQCLDYYTSKERLTHDNMWRCPVCKEPKEAEKQMEVWKLPDTLVIHLKRF 883
Query: 217 TKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIV 275
+ N+++ +K T+V+FP++ +D G +L P+ +++S +YDL
Sbjct: 884 SYNSWWRDKLDTLVDFPLEGLDLGPYVLDPQ---------------QHDSAVYDLYGVSN 928
Query: 276 HDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRT 327
H G G Y + G+WYE D +V +I P+ I T +Y Y+ R+
Sbjct: 929 HMGGLGGGHYTAYCLDTN-GRWYEFDDSYVGEIAPKNIVSTSSYFLFYQRRS 979
>gi|345795041|ref|XP_544715.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Canis
lupus familiaris]
Length = 520
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 132/332 (39%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 264
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 265 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 324
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 325 LICGTESRKF----DPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDET 380
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 381 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 440
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + E +YDL A +VH G +G Y + H+ G+W+
Sbjct: 441 LLEPE-------------NSGPEHCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 485
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + +AYI Y R + +
Sbjct: 486 NDSTVTLTDEDTVVKAKAYILFYVERQAKAGS 517
>gi|70923767|ref|XP_734840.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56507951|emb|CAH86191.1| hypothetical protein PC301887.00.0 [Plasmodium chabaudi chabaudi]
Length = 164
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
L+ EL++K++NP+NFK VSPHE LQAV + S+K F+ ++DP++F W +N +HR
Sbjct: 5 LIVVLAELLKKIYNPKNFKGVVSPHEFLQAVGIESKKNFKIGTKNDPLNFFLWIINKIHR 64
>gi|429328896|gb|AFZ80655.1| ubiquitin carboxyl-terminal hydrolase, putative [Babesia equi]
Length = 395
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 3 CHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAV 62
C + PLR+ L ++ RV+ P S L+ EL+RK +NP NFK VSPHE LQAV
Sbjct: 296 CCIVPLRNKLLL-MDVERVQPPDAVLSTLV-----ELVRKNFNPHNFKGIVSPHEFLQAV 349
Query: 63 VLWSRKQFQFTEQSDPIDFLSWFLNTLH 90
+ S ++ Q DP+ LSW LN LH
Sbjct: 350 GVSSSGLYKIGIQGDPVALLSWLLNRLH 377
>gi|51592088|ref|NP_446226.2| ubiquitin carboxyl-terminal hydrolase 2 [Rattus norvegicus]
gi|6492126|gb|AAF14190.1|AF106659_1 deubiquitinating enzyme Ubp69 [Rattus norvegicus]
Length = 618
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 145/359 (40%), Gaps = 68/359 (18%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 297 CLSNTRELRDYCLQRL-YMRDLGHTSSAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 352
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N +V R
Sbjct: 353 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVN------------------RVAARP 393
Query: 119 IPPVEL------EEKVRQ-----------RL--LLTEEYKETETESPFLYLTCDLPPPPL 159
P E EEK RQ R+ L + K + T + Y + P
Sbjct: 394 KPSPESLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWD 453
Query: 160 FKDEVLENIIPQVNLYTILTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLIL 211
+ + P+V L + F E EK ++ +K+F + P L+L
Sbjct: 454 LSLPIAKRGYPEVTLMDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVL 513
Query: 212 YVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLV 271
++KRF+++ K T VNFP++++D + + E+T + +Y+L
Sbjct: 514 HLKRFSESRIRTSKLTTFVNFPLRDLDLREFAS-------ENTNH---------AVYNLY 557
Query: 272 ANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
A H G G Y + G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 558 AVSNHSGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLFFYELASPPS 616
>gi|348574067|ref|XP_003472812.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Cavia porcellus]
Length = 611
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 141/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWN--PRNFKSHVSPHEM 58
L + LRDY L+ + Y R L++ F +L++ +W P + VSP E
Sbjct: 290 CLSNTRELRDYCLQRL-YMRDLSHTSSVHTGLMEEFAKLIQTIWTSCPNDV---VSPSEF 345
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 346 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVAVRPKSSHENLDHLPDDEKGRQ 404
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 405 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 464
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 465 MRLFTKEDILDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLSTF 524
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 525 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 568
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 569 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 609
>gi|345795043|ref|XP_865326.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Canis
lupus familiaris]
Length = 476
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 132/332 (39%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 165 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 220
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 221 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 280
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 281 LICGTESRKF----DPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDET 336
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 337 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 396
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + E +YDL A +VH G +G Y + H+ G+W+
Sbjct: 397 LLEPE-------------NSGPEHCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 441
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + +AYI Y R + +
Sbjct: 442 NDSTVTLTDEDTVVKAKAYILFYVERQAKAGS 473
>gi|323309248|gb|EGA62469.1| Sad1p [Saccharomyces cerevisiae FostersO]
Length = 358
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 34/217 (15%)
Query: 4 HVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVV 63
H+ P+RD+FL +N+ D+ ++R ++K+W+P+ FK H+S + L
Sbjct: 170 HMVPVRDHFL--LNHF-------DNQGEFIKRLSICVKKIWSPKLFKHHLSVDDFLS--Y 218
Query: 64 LWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVE 123
L R+ DP FL W N + + N K SI+ + G +K+ + P E
Sbjct: 219 LKVREGLNLNP-IDPRLFLLWLFNKICXSSNXLK----SILNHSCKGKVKIAKVEXKP-E 272
Query: 124 LEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNN 183
E V ++++ PF LT DLP F+D + +PQ+N+ +LTKF
Sbjct: 273 ASESVTGKVIV----------KPFWVLTLDLPEFSPFEDGNSVDDLPQINITKLLTKFTK 322
Query: 184 ESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNT 220
T FE+T LP +LI + RF +N+
Sbjct: 323 SRSSSTSTV-------FELTRLPQFLIFHFNRFDRNS 352
>gi|431895934|gb|ELK05352.1| Ubiquitin carboxyl-terminal hydrolase 3 [Pteropus alecto]
Length = 520
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 132/332 (39%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 264
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 265 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGFLQNEVNC 324
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 325 LICGTESRKF----DPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDET 380
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K V FP++ +D
Sbjct: 381 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDIYVEFPLRGLDMKCY 440
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 441 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 485
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + +AYI Y R + +
Sbjct: 486 NDSTVTLTDEDTVVKAKAYILFYVERQAKAGS 517
>gi|153792416|ref|NP_001093229.1| ubiquitin carboxyl-terminal hydrolase 3 [Equus caballus]
gi|148529824|gb|ABQ82144.1| ubiquitin specific peptidase 3 [Equus caballus]
Length = 520
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 135/332 (40%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 264
Query: 82 LSWFLNTLHRALNG--TKKKDSSIVY---------KTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S+I+ K + I L+ +V
Sbjct: 265 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSPSNKCCINGASTVVTAIFGGILQNEVNC 324
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 325 LICGTESRKF----DPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDET 380
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 381 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 440
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + E+ +YDL A +VH G +G Y + H+ G+W+
Sbjct: 441 LLEPE-------------NSGPENCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 485
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + +AYI Y R + +
Sbjct: 486 NDSTVTLTDEDTVVKAKAYILFYVERQAKAGS 517
>gi|383864033|ref|XP_003707484.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Megachile
rotundata]
Length = 915
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 22/163 (13%)
Query: 170 PQVNLYTILTKF--------NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTF 221
P V+L+ L+ F +N E N +K ++ LP L +++KRF
Sbjct: 491 PVVSLHDCLSAFFSADELKGDNMYSCEKCNKLRNGIKFSKVLELPEILCVHLKRFRHELM 550
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
F K V+FP++ +D L E +K TMYDL++ I H G
Sbjct: 551 FSSKIANYVSFPLEGLDMRPYLHKECVSKV--------------TMYDLISVICHHGTAG 596
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
G Y + + + KW+E D VT++ P+ + EAY+ Y+
Sbjct: 597 GGHYTCYALNPIVNKWFEFDDQCVTEVSPETVKHCEAYVLFYK 639
>gi|345490133|ref|XP_001599439.2| PREDICTED: hypothetical protein LOC100114408 [Nasonia vitripennis]
Length = 823
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 127/336 (37%), Gaps = 33/336 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L + PL +Y L E + L++ F +++++LW N HV L+
Sbjct: 501 CLSNTRPLLEYLLNEQYLTDINTTTSSMKGALIKAFSQVIQELW--ENDGDHVVNTSSLK 558
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSI---VYKTFLGSMKVKTR 117
+ + +F Q D +FL + L LH +N K I + ++ SMK
Sbjct: 559 SQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQPIHTDIPDSYSDSMKAAES 618
Query: 118 KIPPVELEE---------KVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENI 168
+ E+ ++R L T + T PF L+ LP P L
Sbjct: 619 WKRYLRSEDSTIVDVFVGQLRSSLRCTVCDHVSVTLDPFWDLS--LPIPSRSGTVRLNQC 676
Query: 169 IPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPT 228
+ +L + + + + K F I P L++++KRF+ F K
Sbjct: 677 LEHFTREEVLDGDEKPTCSKCQ-MRRKCTKSFAIQKFPKILVIHLKRFSPMERFRGKLSV 735
Query: 229 IVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
+V+FP+ ++ P V+ Y+L H G +G Y +
Sbjct: 736 LVDFPLTGLELSAFAAPRVQG----------------CTYNLYGVANHSGTTHSGHYTAY 779
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
H G+W+E D VT + + + +EAY+ YE
Sbjct: 780 CKHPYSGEWHEYNDSRVTPVSARSVVSSEAYVLFYE 815
>gi|159488883|ref|XP_001702430.1| predicted protein [Chlamydomonas reinhardtii]
gi|158271098|gb|EDO96925.1| predicted protein [Chlamydomonas reinhardtii]
Length = 347
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 137/353 (38%), Gaps = 57/353 (16%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L H PL FL + R P L + FG L+++LW R S VSP
Sbjct: 20 CLAHAVPLMQAFLGGTYIKDLNRTNPLGMKGELAEAFGMLLQQLW--RGGVSSVSPRS-F 76
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK------------DSSIVYKT 107
+A + QF Q D +FL++ L+ LH N K K D + +
Sbjct: 77 KAKIGRFAPQFSGYAQHDSQEFLAFLLDGLHEDTNRIKTKPYFETKDEPGRPDEELATEA 136
Query: 108 FLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPP---PLFKDEV 164
+ + + + + ++ L + + PF+YL+ LP P+ ++
Sbjct: 137 W-SQYRARNNSLVVDHFQGLLKSGLDCPKCAYHSVKFDPFMYLSLPLPESRRRPVALEDC 195
Query: 165 LENIIPQVNLYTILTKFNNESEKEY-KTYKENFL--KRFEITSLPPYLILYVKRFTKNTF 221
+ + L +ES+ Y KE+ K+ ++ SLP L++++KRF+ +
Sbjct: 196 MRVFLQPERL--------DESDAWYCPRCKEHVCADKKLDLWSLPEVLVVHLKRFSYTRY 247
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
K T V+FP+ +D G +++A+ + +YD A H G
Sbjct: 248 SRNKLDTRVDFPLHGLDLGSY---------------VLRAQGVAPLYDCFAVSNHFGSMG 292
Query: 282 NGTYRVH-----------LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + G WY D HV+ + P+ + + AY+ Y
Sbjct: 293 GGHYTAYAKLPGPPPGTAAGADGAEAWYCFDDSHVSAVEPEAVRSSAAYVLFY 345
>gi|340717142|ref|XP_003397046.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Bombus
terrestris]
Length = 935
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 22/163 (13%)
Query: 170 PQVNLYTILTKF--------NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTF 221
P V+L+ L+ F +N E N +K ++ LP L +++KRF
Sbjct: 511 PVVSLHDCLSAFFSADELKGDNMYSCEKCNKLRNGIKFSKVLELPEILCVHLKRFRHELM 570
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
F K V+FP++ +D L E +K TMYDL++ I H G
Sbjct: 571 FSSKIANYVSFPLEGLDMRPYLHKECVSKV--------------TMYDLISVICHHGTAG 616
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
G Y + + + KW+E D VT++ P+ + EAY+ Y+
Sbjct: 617 GGHYTCYALNPIVNKWFEFDDQCVTEVSPETVKHCEAYVLFYK 659
>gi|432110442|gb|ELK34059.1| Ubiquitin carboxyl-terminal hydrolase 2 [Myotis davidii]
Length = 599
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 142/343 (41%), Gaps = 50/343 (14%)
Query: 8 LRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW-NPRNFKSHVSPHEMLQAVVLWS 66
LRDY L+ + Y R + L++ F +L++ +W +P N VSP E + ++
Sbjct: 285 LRDYCLQRL-YLRDLGHSSHAHTALMEEFAKLIQAIWTSPLN--DVVSPSEFKTQIQRYA 341
Query: 67 RKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEE 126
+ + +Q D +FL + L+ LH +N + S K R++ LE
Sbjct: 342 PRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTVRPKSTPENLDHLPDDEKGRQMWRKYLER 400
Query: 127 -----------KVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLY 175
++R L T+ + PF L+ LP + + P+V L
Sbjct: 401 EDSRIGDLFVGQLRSSLTCTDCGHCSTVFDPFWDLS--LP--------IAKRGYPEVTLM 450
Query: 176 TILTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNP 227
+ F E EK + LK+F I P L+L++KRF+++ K
Sbjct: 451 DCMRLFTKEDVLDGDEKPTCCRCRARRRCLKKFSIQRFPKVLVLHLKRFSESRVRTSKLT 510
Query: 228 TIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRV 287
T V+FP++++D + + E+T + +Y+L A H G G Y
Sbjct: 511 TFVSFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTA 554
Query: 288 HLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
+ G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 555 YCRSPATGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 597
>gi|350416461|ref|XP_003490956.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Bombus
impatiens]
Length = 916
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 170 PQVNLYTILTKFNNESE----KEYKTYK----ENFLKRFEITSLPPYLILYVKRFTKNTF 221
P V+L+ L+ F + E Y K N +K ++ LP L +++KRF
Sbjct: 492 PVVSLHDCLSAFFSADELKGDNMYSCEKCNKLRNGIKFSKVLELPEILCVHLKRFRHELM 551
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
F K V+FP++ +D L E +K TMYDL++ I H G
Sbjct: 552 FSSKIANYVSFPLEGLDMRPYLHKECVSKV--------------TMYDLISVICHHGTAG 597
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
G Y + + + KW+E D VT++ P+ + EAY+ Y+
Sbjct: 598 GGHYTCYALNPIVNKWFEFDDQCVTEVSPETVKHCEAYVLFYK 640
>gi|440907019|gb|ELR57212.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Bos grunniens
mutus]
Length = 492
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 137/332 (41%), Gaps = 45/332 (13%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R G+++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 181 RSQGENNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 236
Query: 82 LSWFLNTLHRALNG--TKKKDSSIVYK--TFLGSMKVKTRKIPPVE-------LEEKVRQ 130
+ + L+ LH L G SSI+ + T S K V L+ +V
Sbjct: 237 MRYLLDHLHLELQGGFNGISRSSILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 296
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 297 LICGTESRKF----DPFLDLSLDIPSQFRNKRSKNQENGPTCSLRDCLRSFTDLEELDET 352
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 353 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 412
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + E+ +YDL A +VH G +G Y + H+ G+W+
Sbjct: 413 LLEPE-------------NSGPENCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHF 457
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + +AYI Y R + +
Sbjct: 458 NDSTVTLTDEDTVLKAKAYILFYVERQAKAGS 489
>gi|440797226|gb|ELR18321.1| Ubiquitin carboxylterminal hydrolase [Acanthamoeba castellanii str.
Neff]
Length = 926
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 145/382 (37%), Gaps = 79/382 (20%)
Query: 1 ALCHVTPLRDYFLREINY---ARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHE 57
L + PLR YFLR + R K P LV F +L+ +W R S + P E
Sbjct: 157 CLSNCPPLRTYFLRYMARQVKGRKKTSP------LVFHFTQLIYDMWGGR--YSSLRPGE 208
Query: 58 MLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR------------------ALNGTKKK 99
+L+ + ++ F Q D +F+ L+ LH A +G K+K
Sbjct: 209 VLREIRRFN-PMFGGYAQQDSQEFMRCLLDRLHEDTKEELPRIESSPTSSGSADSGEKEK 267
Query: 100 ----------DSSIVYKTFLGSM-----KVKTRKIPPV-----ELEEKVRQRLLLTEEYK 139
DS+ V ++ G + +K K+ P +L + +L + K
Sbjct: 268 ETKPPQGHDSDSNGVVESTPGYLLSRIKCLKCGKVSPTKDAFYDLSIPIPDDKMLDKVTK 327
Query: 140 ETETESPFLYLTCDLPPPPLFKDE----VLENIIPQVNLYTILTKFNNESE--------K 187
E E E + P P LF +L N V L L F + E
Sbjct: 328 EIEAEG--VLSNSKRPSPGLFSKVTNWLMLSNRT--VTLEDCLQAFCTKEELMGADRYRC 383
Query: 188 EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEV 247
E+ + K I P L +++KRF +++F K +V FP++++D +
Sbjct: 384 EHCKTLNDSQKFLRIAQPPELLCIHIKRFRHDSYFGGKLSDVVQFPLRDLDISRFCEQDA 443
Query: 248 KAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTD 307
A S YDLV + H G S G Y + + GKWYE D T
Sbjct: 444 DAPQVSMKYDLVSV------------VNHIGGISGGHYIAYALNDEDGKWYEFDDSWATA 491
Query: 308 ILPQMITLTEAYIQIYELRTTP 329
+ + EAY+ Y LR +P
Sbjct: 492 VSEDTVRNKEAYVLFY-LRQSP 512
>gi|392565337|gb|EIW58514.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 1173
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 73/319 (22%), Positives = 123/319 (38%), Gaps = 39/319 (12%)
Query: 32 LVQRFGELMRKLW-------NPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSW 84
L F ++R++W +P F+ + H QF +EQ D +FLS+
Sbjct: 864 LANAFANILREMWQGEHGTLSPVPFRRSLCSHA----------PQFSGSEQHDSQEFLSF 913
Query: 85 FLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVE----------------LEEKV 128
L+ LH LN K + ++ +I + + +
Sbjct: 914 LLDGLHEDLNRILAKPQVVSTPEREAELERLPTQIASEQEWQIYRMRDDSLVVDFFQGQY 973
Query: 129 RQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKE 188
R R+ +K + T + F+YLT +PP L+ I ++ K +
Sbjct: 974 RNRMECLTCHKTSTTYNTFMYLTLPVPPKSGNAKVPLQQCIDAFVKEEVMDKSDAWHCPH 1033
Query: 189 YKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVK 248
KT ++ KR ++ LPP L++++KRF+ F +K T V FP+K +D + + P +
Sbjct: 1034 CKTLRKA-TKRLSLSRLPPVLLIHLKRFSAKGPFTDKIETTVEFPLKGLDLTNYMPPPLP 1092
Query: 249 AKYES---TMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHV 305
D + + YDL H G S G Y + + G W D V
Sbjct: 1093 PGVSGGSPVQPDDPRYQNPPYRYDLYGVTNHFGSLSTGHYTAFIASR--GGWLYCDDSRV 1150
Query: 306 TDILPQMITLTEAYIQIYE 324
T + + AYI Y+
Sbjct: 1151 TSAEAKDVVGKPAYILFYK 1169
>gi|344293364|ref|XP_003418393.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Loxodonta
africana]
Length = 520
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 133/334 (39%), Gaps = 49/334 (14%)
Query: 23 RPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPI 79
R GD++ LV+ F + + LW +P F SP + V+W F+ +Q D
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALWQGSPTAF----SPESLF--YVVWKIMPNFRGYQQQDAH 262
Query: 80 DFLSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKV 128
+F+ + L+ LH L G S S K + I L+ +V
Sbjct: 263 EFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGVLQNEV 322
Query: 129 RQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-K 187
+ TE K PFL L+ D+P K + P +L L F + E
Sbjct: 323 NCLICGTESRKF----DPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELD 378
Query: 188 EYKTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
E + Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 379 ETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMK 438
Query: 241 D-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWY 298
+L PE + E+ +YDL A +VH G +G Y H+ G+W+
Sbjct: 439 CYLLEPE-------------NSGPENCLYDLAAVVVHHGSGVGSGHYTAFATHE--GRWF 483
Query: 299 EIQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
D VT + + +AYI Y R + +
Sbjct: 484 HFNDSTVTLTDEETVLKAKAYILFYVERQAKAGS 517
>gi|426244688|ref|XP_004016152.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1 [Ovis
aries]
gi|426244690|ref|XP_004016153.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Ovis
aries]
Length = 606
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 143/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 285 CLSNTRELRDYCLQRL-YLRDLSHSSRAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 340
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 341 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTARPKSNTENLDHLPDDEKGRQ 399
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 400 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPITKRGYPEVTLMDC 459
Query: 178 LTKFNNES-----EKEYKTY---KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK + ++ +K+F I P L+L++KRF+++ K
Sbjct: 460 MRLFTKEDVLDGDEKPTCCHCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTAF 519
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 520 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 563
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D V+ + + ++AY+ YEL + PS
Sbjct: 564 RSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFYELASPPS 604
>gi|242000848|ref|XP_002435067.1| conserved hypothetical protein [Ixodes scapularis]
gi|215498397|gb|EEC07891.1| conserved hypothetical protein [Ixodes scapularis]
Length = 830
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 69/162 (42%), Gaps = 22/162 (13%)
Query: 170 PQVNLYTILTKFNNESEKE----YKTYK----ENFLKRFEITSLPPYLILYVKRFTKNTF 221
P V L L F + E + Y K N +K + LP L +++KRF
Sbjct: 452 PGVGLQDCLAAFFSADELKGDNMYSCEKCRKLRNGIKFSRVLQLPEVLCIHLKRFRHEVM 511
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
F K + V+FP+ +D L E ST+YDL+A I H G
Sbjct: 512 FSSKIGSYVSFPLDGLDMSPFLHRECP--------------RTSTIYDLMAVICHHGTAG 557
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
+G Y + + +WYE D +VT + PQ++ EAY+ Y
Sbjct: 558 SGHYTTYALNHLNDQWYEFDDQYVTSVEPQVVQNCEAYVLFY 599
>gi|145519321|ref|XP_001445527.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412982|emb|CAK78130.1| unnamed protein product [Paramecium tetraurelia]
Length = 973
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Query: 198 KRFEITSLPPYLILYVKRF-TKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYES-T 254
K +I P LI +KRF N F +K T V+FP+ +D D ++ + +YE+ T
Sbjct: 827 KSMQIYKAPQILIFTLKRFKASNRMFKQKLETFVDFPINGLDMTDYLINSKTPQEYENET 886
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
D + + +YDL A H G G Y +K KWY D HV +I Q +
Sbjct: 887 EDDNGENNKQRVIYDLYAVSNHFGGLGGGHYTACAKNKYTKKWYNFDDSHVGEISEQQVI 946
Query: 315 LTEAYIQIYELRTTPSPTAMSE 336
AY+ Y+LRT S + +
Sbjct: 947 TKSAYVLCYQLRTDESKNSQGQ 968
>gi|327290078|ref|XP_003229751.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 2-like, partial [Anolis carolinensis]
Length = 666
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 140/351 (39%), Gaps = 52/351 (14%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L + LRDY L+ Y R L+ F +L++ LW +S VSP E
Sbjct: 344 CLSNTKELRDYCLQN-QYVRDLNNNSRMQMNLMAEFAKLIQALWTSSPNES-VSPSEFKT 401
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+ ++ + + +Q D +FL + L+ LH +N I+ + GS + +
Sbjct: 402 QIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHSEVN-------RILVRPKGGS----SDSLD 449
Query: 121 PVELEEKVRQ---RLLLTE----------EYKETETESPFLYLTCDLPPPPLFKDEVLEN 167
+ EEK RQ R L E + K + T S + + P + +
Sbjct: 450 HLPDEEKGRQMWMRYLAREDSRIGDLFVGQLKSSLTCSVCGHCSTAFDPFWDLSLPIAKK 509
Query: 168 IIPQVNLYTILTKFNNES-----EKEYKTY---KENFLKRFEITSLPPYLILYVKRFTKN 219
+VNL L F E EK + + K+F I P L+L++KRF++
Sbjct: 510 SYGEVNLADCLRLFTKEDILDGDEKPTCCHCKARTKCTKKFSIQRFPKILVLHLKRFSEA 569
Query: 220 TFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGE 279
K T VNFP+K++D + + +Y+L A H G
Sbjct: 570 RIRSSKLTTFVNFPLKDLD----------------LREFASQSCNHAVYNLYAVSNHSGT 613
Query: 280 PSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G Y + + G+W+ D VT + + ++AY+ YEL ++PS
Sbjct: 614 TMGGHYTAYCKNPVSGEWHAFNDSRVTPLSASHVRSSDAYLLFYEL-SSPS 663
>gi|157108246|ref|XP_001650143.1| hypothetical protein AaeL_AAEL004980 [Aedes aegypti]
gi|108879378|gb|EAT43603.1| AAEL004980-PA [Aedes aegypti]
Length = 626
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 128/333 (38%), Gaps = 66/333 (19%)
Query: 50 KSHVSPHEMLQAVVLWSR-KQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTF 108
K +SP + +V+W QF+ Q D +FL + L+ LH L ++ S V +
Sbjct: 306 KGAISPECLF--LVIWKVVPQFRGHRQHDAHEFLRYMLDRLHTEL----QQVSFPVEISS 359
Query: 109 LGSMKVKTRKIPP------VELEEKVRQRL-------LLTEEYK------ETETESPFLY 149
+ K K P L+ K R + +L E + E++ PFL
Sbjct: 360 PSAQKASETKSNPYNIPALSHLQSKGRNSIVTNVFGGILQSEVRCLICGMESKKHDPFLD 419
Query: 150 LTCDLP------PPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKT--------YKEN 195
L+ D+P PP ++ E P N+ L F E K+
Sbjct: 420 LSLDIPEKFYNKDPPESGEKDKEGNPPVCNISDCLASFTEVEELTETELYYCSSCKCKQK 479
Query: 196 FLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDIL---TPEVKAKYE 252
KRF I LP L L++KRF N F+ K ++FP+ +D + PE +
Sbjct: 480 STKRFWIRRLPNVLCLHIKRFRWNNFYRTKIDLRISFPINALDMSQFVLNNGPETR---- 535
Query: 253 STMYDLVKAKYESTMYDLVANIVHDGEPSN-GTYRVHLYHKGIGKWYEIQDLHVTDILPQ 311
++ +YDL A IVH G S+ G Y + + G+ W D V ++
Sbjct: 536 -------RSNSSCNIYDLAAVIVHHGNGSSCGHYTSYAINNGV--WMHFNDHSVKEVSSS 586
Query: 312 MITLTEAYIQIY---------ELRTTPSPTAMS 335
+ + YI Y L TTPS T
Sbjct: 587 AVAECKPYILFYIKRDPTNTSRLLTTPSTTTCG 619
>gi|410076064|ref|XP_003955614.1| hypothetical protein KAFR_0B01800 [Kazachstania africana CBS 2517]
gi|372462197|emb|CCF56479.1| hypothetical protein KAFR_0B01800 [Kazachstania africana CBS 2517]
Length = 436
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 142/331 (42%), Gaps = 84/331 (25%)
Query: 4 HVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNF-KSHVSPHEMLQAV 62
H+ P+RD+ L +++ K L ++ +++K+W+P K H+S E++ +
Sbjct: 177 HIFPVRDHLLL-LDHKDTKINE------LSRKISLIVKKIWSPNLISKYHISTIEVITYL 229
Query: 63 VLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD-SSIVYKTFLGSMKVKTRKIPP 121
++ F+ +P L+W LN L + K KD S++ K G+++++++ I
Sbjct: 230 MIHEPHLFK---NHNPKLMLTWLLNYLTK-----KDKDIGSVLKKNLQGTIEMRSKHIN- 280
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKF 181
F +LT LPP +FKD N PQV L T++
Sbjct: 281 -------------------------FWHLTVSLPPITVFKDGNNVNKFPQVKLETLINNK 315
Query: 182 NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD 241
+ EYK K LP YLI+ + R +N + + FP+K+ +
Sbjct: 316 FLSNNAEYKLEK-----------LPNYLIISIDR--------SENDSTLKFPIKDRN--- 353
Query: 242 ILTPEVKAKYESTMYDL-VKAKYESTMYDLVANIVHDGEPSN-------GTYRVHLYHKG 293
TM + ++ Y L+ N+++ + S+ + LY++
Sbjct: 354 -----------QTMVEFSLQLTLSGDKYRLICNLINKVKKSSRIDKDDENRWLTQLYNEK 402
Query: 294 IGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+ KWYEI ++V +++ L E YIQI+E
Sbjct: 403 MDKWYEIDGVNVLSKDSELLFLNETYIQIWE 433
>gi|410912832|ref|XP_003969893.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Takifugu
rubripes]
Length = 1082
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 139/339 (41%), Gaps = 42/339 (12%)
Query: 1 ALCHVTPLRDYF-----LREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L +YF + +IN + + GD + + FG +M+ LW+ +SP
Sbjct: 767 CLCNAPALTEYFNNNYYMDDINRSNILGHKGD----VAEEFGVIMKALWS--GLYKCISP 820
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIV 104
+ + + +QF EQ D + L + ++ LH LN + D
Sbjct: 821 RD-FKITIGKINEQFSGYEQQDSQELLLFLMDGLHEDLNKADNRKRYKEEENDHLDDQTA 879
Query: 105 YKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEV 164
K+ I + + + + ++++ T F+YL+ LP K
Sbjct: 880 ADVAWRKHKLLNESIIVALFQGQFKSTVQCLTCHRKSRTFETFMYLS--LPLASTSKCS- 936
Query: 165 LENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVE 224
L++ + + LT N + K ++++ K+ EI +PP L++++KRF+ + +
Sbjct: 937 LQDCLRLFSKEEKLTDNNKVFCRHCKAHRDS-TKKLEIWKVPPILLVHLKRFSYEGRWKQ 995
Query: 225 KNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGT 284
K T V+FP+ ++D A+Y ++ K Y L A H G G
Sbjct: 996 KLQTSVDFPLDSLDL---------AQY------VIGPKQSLKRYSLYAVSNHYGGLDGGH 1040
Query: 285 YRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
Y + +WY+ D V+DI + + AYI Y
Sbjct: 1041 YTAYCKSALKQRWYKFDDHEVSDISTSSVKSSAAYILFY 1079
>gi|351705889|gb|EHB08808.1| Ubiquitin carboxyl-terminal hydrolase 2 [Heterocephalus glaber]
Length = 612
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 142/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWN--PRNFKSHVSPHEM 58
L + L+DY L+ + Y + + L++ F +L++ +W P + VSP E
Sbjct: 291 CLSNTRELKDYCLQRL-YMQDLSHTSSTHTALMEEFAKLIQTIWTSCPNDV---VSPSEF 346
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 347 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTVRPKSNPENLNHLPDDEKGRQ 405
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 406 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRSYPEVTLMDC 465
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 466 MRLFTKEDVLDGDEKPTCCCCRARKRCIKKFSIQRFPTILVLHLKRFSESRIRTSKLTTF 525
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 526 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 569
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D VT + + ++AY+ YEL + PS
Sbjct: 570 RSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYELASPPS 610
>gi|335295001|ref|XP_003357373.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Sus scrofa]
Length = 396
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 140/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 75 CLSNTRELRDYCLQRL-YMRDLSHSSSAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 130
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 131 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTVRPKSSPEGLDHLPDDEKGRQ 189
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 190 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 249
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F + P L+L++KRF+++ K T
Sbjct: 250 MRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTF 309
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + + +Y+L A H G G Y +
Sbjct: 310 VNFPLRDLDLREFASENIN----------------HAVYNLYAVSNHSGTTMGGHYTAYC 353
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D V+ + + ++AY+ YEL + PS
Sbjct: 354 RSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFYELASPPS 394
>gi|403414636|emb|CCM01336.1| predicted protein [Fibroporia radiculosa]
Length = 1176
Score = 68.2 bits (165), Expect = 6e-09, Method: Composition-based stats.
Identities = 69/312 (22%), Positives = 133/312 (42%), Gaps = 25/312 (8%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
L F ++R +W +SP +++ ++ QF TEQ D +FL++ L+ LH
Sbjct: 867 LAHAFANILRDMWQGE--LQCLSPVTFRRSLCQYA-PQFGGTEQHDSQEFLNFLLDGLHE 923
Query: 92 ALNGTKKK---DSSIVYKTFLGSM-------------KVKTRKIPPVELEEKVRQRLLLT 135
LN +K DS+ + L + +++ + + + R RL
Sbjct: 924 DLNRVLQKPQIDSTPEREAELERLPTQIASEQEWQIWRMRNDSLVVDFFQGQFRNRLECL 983
Query: 136 EEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKEN 195
+K + T + F+YLT +P L + + ++ K + + KT ++
Sbjct: 984 TCHKTSTTYNTFMYLTLPIPTSRSLSKVSLSHCLDAFVKEEVMEKSDAWNCPHCKTLRKA 1043
Query: 196 FLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYES-- 253
K ++ LPP L++++KRF+ F +K T V++P++ +D + + P + +
Sbjct: 1044 -TKNLSLSRLPPVLLIHLKRFSSKGHFTDKIETFVDYPLRGLDLTNYMPPPLPPGVNAGP 1102
Query: 254 -TMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQM 312
D +A+ YDL H G S+G Y + + G W D ++ P+
Sbjct: 1103 QMPRDDPRAQIPPYRYDLYGVTNHFGTLSSGHYTAFISSR--GGWLYCDDSRISQADPKD 1160
Query: 313 ITLTEAYIQIYE 324
+ AY+ Y+
Sbjct: 1161 VVGKPAYMLFYK 1172
>gi|391346587|ref|XP_003747554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Metaseiulus occidentalis]
Length = 332
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 135/344 (39%), Gaps = 48/344 (13%)
Query: 6 TPLRDYFLREINYARVKRPPGDSSFL----LVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
T L DYF R R ++S L L Q F L+ +W ++ S +SP E
Sbjct: 11 TQLADYF-----RGRAFRADVNTSSLMKGDLAQAFASLVTSMWTSKD-GSAISPTEFRSQ 64
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSM--------- 112
+ ++ + +++Q D +FL + L LH +N + + GS+
Sbjct: 65 IQKYAPRFMGYSQQ-DAQEFLRYLLQGLHEDVNRVRIQPRGTCLPEIDGSLSDHQKAAES 123
Query: 113 -----KVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLEN 167
+V +I + + + ++ L +E ++ T PF L+ P+ +
Sbjct: 124 WRRYLRVDDSRIVDLFVGQ-LKSTLKCSECGHKSVTFDPFWDLS-----LPISDSRCTAS 177
Query: 168 IIPQVNLYTILTKFNNESEK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVE 224
+ Q Y + + EK + ++ K I P L+L++KRF + +
Sbjct: 178 TLQQCLEYFTKEEVLDGDEKPTCDQCKKRQRMTKNLSIWKCPKILVLHLKRFGNSERYRS 237
Query: 225 KNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGT 284
K T V FP++N+D ++ + + Y+L+ H G +G
Sbjct: 238 KLETNVQFPLRNLDISAFMSNGGDSHF--------------CKYNLIGVSNHSGSTHSGH 283
Query: 285 YRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTT 328
Y + +WY D V+++ + +EAY+ YEL T
Sbjct: 284 YTATCLNPINRQWYSCNDARVSEVGESRVVSSEAYVLFYELDGT 327
>gi|403365930|gb|EJY82756.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 828
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 148/370 (40%), Gaps = 73/370 (19%)
Query: 1 ALCHVTPLRDYFLREINYARVKR--PPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEM 58
L V PL D+FL +++ + + P G S + + F L++ +W R + + P ++
Sbjct: 212 CLSAVQPLTDFFLGDLHEQTINKTNPMGTSGEISI-YFANLLKDIW--RGKEEKIYPQKL 268
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
L +K +F D +FL++ L+ LH LN K ++ K K+++
Sbjct: 269 L-------KKLNEFAPHQDAQEFLAYLLDCLHEDLNRADKFNNLKKQKEIDHKKKIQSLT 321
Query: 119 IPPVELEEK--------VRQRLLLTEEYK--------------ETETESPFLYLTC---- 152
+ E E++ RQ L+ + +K + + +S LTC
Sbjct: 322 LGKQETEQQENFAGYSEERQELIAYDAWKDHLFNNRSIIVDLFQGQLKSALKCLTCQHMS 381
Query: 153 ---------DLPPPPLFKDE--VLENIIPQVNLYTILTKFNNESEKEYKTYK----ENFL 197
+P P +K LE + + IL + + ++K K +
Sbjct: 382 IKFDSFMYLSVPIPSGYKGRNPTLEECVEEFTREEIL-----DGDDKWKCPKCKINQRAS 436
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+ +I LP LI+++KRF + K V+FP+ N++ LTP V
Sbjct: 437 KKIDIWKLPSILIVHLKRFEFHEKRYGKINDYVDFPLHNLN----LTPYVS--------- 483
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
K + E +YDL A H+G G Y H+ WY D V I + +T
Sbjct: 484 --KLQREKPIYDLFAVSNHEGYLGGGHYYAFTKHRQNQLWYSFDDDIVKRISDEKVTSAG 541
Query: 318 AYIQIYELRT 327
AYI Y T
Sbjct: 542 AYILFYSKMT 551
>gi|74179937|dbj|BAE36525.1| unnamed protein product [Mus musculus]
Length = 482
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 127/314 (40%), Gaps = 45/314 (14%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDFLSWFLNTLH 90
LV+ F + + LW + ++ SP + V+W F+ +Q D +F+ + L+ LH
Sbjct: 180 LVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 235
Query: 91 RALNGT-----------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYK 139
L G +K S K + I L+ +V + TE K
Sbjct: 236 LELQGGFNGVSRSAILQEKSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRK 295
Query: 140 ETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEYKTY------ 192
PFL L+ D+P K + P +L L F + E E + Y
Sbjct: 296 F----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCK 351
Query: 193 -KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAK 250
K+ K+F I LP L L++KRF + K T V FP++ +D +L PE
Sbjct: 352 KKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRNKVDTYVQFPLRGLDMKCYLLEPE---- 407
Query: 251 YESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEIQDLHVTDIL 309
+ +S +YDL A +VH G +G Y + H+ G+W+ D VT
Sbjct: 408 ---------NSGPDSCLYDLAAVVVHHGSGVGSGHYTAYAVHE--GRWFHFNDSTVTVTD 456
Query: 310 PQMITLTEAYIQIY 323
+ + +AYI Y
Sbjct: 457 EETVGKAKAYILFY 470
>gi|392565514|gb|EIW58691.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 1086
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPE-VKAKYESTMY 256
KRF++ LP L++++KRF+ + +K T ++FP++ +D +++ V ++
Sbjct: 925 KRFDLWKLPDVLVVHLKRFSDSRMLRDKIDTFIDFPIEGLDLTEMVGERLVGSRLREQGA 984
Query: 257 DL----VKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQM 312
D+ ++ E YDL H G G YR + + GKWY D +VT+ P+
Sbjct: 985 DVEALGLEGLDEPLQYDLFGVDEHLGGSGGGHYRAYALNHVTGKWYHFDDSYVTESRPEA 1044
Query: 313 ITLTEAYIQIYELRT 327
AY+ Y RT
Sbjct: 1045 AVNENAYLLFYRRRT 1059
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 1 ALCHVTPLRDYFL-----REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
L H T L DYFL E+NY P + Q FG LM ++W+P + S +P
Sbjct: 381 CLAHNTELVDYFLTGAYQEELNYDN----PLGMHGAVAQAFGALMSRIWDPESTMSSYTP 436
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALN---------------GTKKKD 100
E Q + ++ QF +Q D + +++ L+ LH LN G K+
Sbjct: 437 REFKQTLQRFA-PQFSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYVEKPDWEGGGDKEL 495
Query: 101 SSIVYKTFLGSMKVKTRKIPPVEL-EEKVRQRLLLTEEYKETETESPFLYLTCDLP 155
+ ++ G MK + V+L + + + L+ E K + T PF+YLT LP
Sbjct: 496 VELANTSWEGYMKQNDSVV--VDLFQGQYQSTLVCPECSKVSITFDPFMYLTLPLP 549
>gi|242020942|ref|XP_002430906.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212516124|gb|EEB18168.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 945
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 22/163 (13%)
Query: 170 PQVNLYTILTKF--------NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTF 221
P V+L+ L F +N E + N +K ++ LP L +++KRF
Sbjct: 433 PTVSLHDCLAAFFSADELKGDNMYSCEKCSKLRNGVKYSKVLDLPEVLCIHLKRFRHELA 492
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
F K + VNFP+ ++ L + K+ E T YDL + I H G +
Sbjct: 493 FSSKINSFVNFPLTGLNMRPYLHKDCKS--------------EVTSYDLTSVICHHGTAN 538
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
G Y + G+WYE+ D VT + P+ ++ E Y+ Y+
Sbjct: 539 GGHYTCYALSPFTGEWYELDDQCVTQVAPETVSNVECYVLFYK 581
>gi|76156067|gb|AAX27305.2| SJCHGC05849 protein [Schistosoma japonicum]
Length = 251
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 36/50 (72%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKS 51
L H++PLRDYFL N+ + GD LLVQRF EL+RKLWNPRNFK+
Sbjct: 201 LSHISPLRDYFLNIKNFDNLPTISGDQMMLLVQRFSELIRKLWNPRNFKT 250
>gi|348541545|ref|XP_003458247.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Oreochromis
niloticus]
Length = 1082
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 139/346 (40%), Gaps = 56/346 (16%)
Query: 1 ALCHVTPLRDYF-----LREINYARVKRPPGDSSFLLVQRFGELMRKLW-------NPRN 48
LC+ L +YF L +IN + G+ + + FG +M+ LW +PR+
Sbjct: 767 CLCNTPALAEYFNNNCYLEDINRHNILGHKGE----VAEEFGVIMKALWAGLYKCISPRD 822
Query: 49 FKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK--------- 99
FK + +QF +Q D + L + ++ LH LN +
Sbjct: 823 FKITIGK----------INEQFAGYDQQDSQELLLFLMDGLHEDLNKADNRKRYKEEEND 872
Query: 100 --DSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPP 157
D K+ I + + + + ++++ T F+YL+ LP
Sbjct: 873 HLDDQTGADLAWSKHKLLNESIIVALFQGQFKSTVQCLTCHRKSRTFETFMYLS--LPLA 930
Query: 158 PLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFT 217
K L++ + + LT N + K ++++ K+ EI +PP L++++KRF+
Sbjct: 931 STSKCS-LQDCLRLFSKEEKLTDNNKVFCRHCKAHRDS-TKKLEIWKVPPILLVHLKRFS 988
Query: 218 KNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD 277
+ +K T V+FP+ N+D A+Y ++ K Y+L H
Sbjct: 989 YEGRWKQKLQTSVDFPLDNLDL---------AQY------VIGPKQSLKRYNLYGVSNHY 1033
Query: 278 GEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G G Y + + +WY+ D V+DI + + AYI Y
Sbjct: 1034 GGLDGGHYTAYCKNAAKQRWYKFDDHEVSDISTSSVKSSAAYILFY 1079
>gi|328708865|ref|XP_003243820.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like
[Acyrthosiphon pisum]
Length = 792
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 132/310 (42%), Gaps = 56/310 (18%)
Query: 31 LLVQRFGELMRKLWN--PRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNT 88
L+ + F +++ LW+ R F+S + + + + F+ +Q D +FL+ L+
Sbjct: 518 LVAKEFSNVIKNLWSQSGRGFQS-----QQFKDTIGEYKDMFKHYDQQDSHEFLTILLDW 572
Query: 89 LHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP--VELEEKVRQRLLLTEE--------- 137
LH LN + +D+ ++ LG+ K + + + Q+L ++
Sbjct: 573 LHDDLN--QPEDNRVI----LGASKETGEEDWGNWTKANNSIIQQLFYGQQKSTVSCDTC 626
Query: 138 YKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYK---- 193
++++ T PFL L+ LP P L + + LY N ES + K
Sbjct: 627 FEKSVTFEPFLSLS--LPLPSEGNKCTLSDCLQ---LY-----LNGESICGWHCPKCKRN 676
Query: 194 ENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYES 253
+ K+ +I LPPYLI+++KRF+ N + K + V FP N+D + + ++
Sbjct: 677 RDATKKLDIMRLPPYLIIHLKRFSSNGY---KKNSNVEFPKMNLDMSNFINGLEHRNWKY 733
Query: 254 TMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMI 313
+Y V+N H G G Y + I KWY+ D+ V +I I
Sbjct: 734 YLYG-------------VSN--HSGSLDGGHYTASCFKNSINKWYKFDDVRVYEIDSSTI 778
Query: 314 TLTEAYIQIY 323
EAYI Y
Sbjct: 779 CSPEAYILFY 788
>gi|327288428|ref|XP_003228928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Anolis
carolinensis]
Length = 1066
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 144/344 (41%), Gaps = 52/344 (15%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFL-----LVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R + R S+FL + + FG +M+ LW + ++SP
Sbjct: 742 CLCNAPHLADYFNRNYYQVDINR----SNFLGHKGEVAEEFGIIMKALWAGQY--RYISP 795
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYK--------- 106
+ + + QF Q D + L + ++ LH LN K D+ YK
Sbjct: 796 KD-FKMTIGKINDQFAGYSQQDSQELLLFLMDDLHEDLN---KADNRKRYKEENNDDLDD 851
Query: 107 ---TFLGSMKVK--TRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK 161
L K K I + + + + +K++ T F+YL+ LP K
Sbjct: 852 PKAADLAWHKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLS--LPLASTSK 909
Query: 162 DEVLENIIPQVNLYTILTKF--NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKN 219
+ E L++ K NN + + + LK+ EI LPP L++++KRF+ +
Sbjct: 910 CTLQECF----RLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYD 965
Query: 220 TFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGE 279
+ +K T V+FP++++D ++Y ++ K S Y+L A H G
Sbjct: 966 GRWKQKLQTSVDFPLESLDV---------SQY------VIGPKSNSKRYNLFAVSNHYGG 1010
Query: 280 PSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + +WY+ D V++I + + AYI Y
Sbjct: 1011 LDGGHYTAYCKNATKQRWYKFDDHEVSEISTSSVKSSAAYILFY 1054
>gi|311264080|ref|XP_003129987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Sus scrofa]
Length = 606
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 140/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 285 CLSNTRELRDYCLQRL-YMRDLSHSSSAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 340
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 341 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTVRPKSSPEGLDHLPDDEKGRQ 399
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 400 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 459
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F + P L+L++KRF+++ K T
Sbjct: 460 MRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTF 519
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + + +Y+L A H G G Y +
Sbjct: 520 VNFPLRDLDLREFASENIN----------------HAVYNLYAVSNHSGTTMGGHYTAYC 563
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D V+ + + ++AY+ YEL + PS
Sbjct: 564 RSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFYELASPPS 604
>gi|449548362|gb|EMD39329.1| hypothetical protein CERSUDRAFT_64183 [Ceriporiopsis subvermispora B]
Length = 1166
Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 71/312 (22%), Positives = 129/312 (41%), Gaps = 25/312 (8%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
L F ++R++W N ++P ++V ++ QF +EQ D +FL+ L+ LH
Sbjct: 857 LAHAFASILREMWQGEN--QCLTPVTFRRSVCTYA-PQFSGSEQHDSQEFLTSLLDGLHE 913
Query: 92 ALNGTKKKDSS----------------IVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLT 135
LN K + I + +++ + + + R RL
Sbjct: 914 DLNRVLHKPHTEPTPEQEAELERLPVQIASEREWQIYRMRNDSLVVDFFQGQFRNRLECL 973
Query: 136 EEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKEN 195
+K + T + F+YLT +P L+ + ++ K + + KT ++
Sbjct: 974 TCHKTSTTYNAFMYLTLPIPSTRSGSKVSLQQCLDAFVKEEVMEKSDAWNCPHCKTLRKA 1033
Query: 196 FLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDIL---TPEVKAKYE 252
KR ++ LPP L++++KRF+ F +K T+V+FP++ +D + + P
Sbjct: 1034 -TKRLSLSRLPPVLLIHLKRFSAKGPFTDKVETVVDFPLRGLDLTNYMPPPLPPGVGGGP 1092
Query: 253 STMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQM 312
S D + + YDL A H G S G Y + + G W D V+ +
Sbjct: 1093 SISRDDPRCQMPPYRYDLYAVTNHFGTLSGGHYTAFISSR--GGWLYCDDSRVSQADAKD 1150
Query: 313 ITLTEAYIQIYE 324
+ AYI Y+
Sbjct: 1151 VVGRPAYILFYK 1162
>gi|427785435|gb|JAA58169.1| Putative ubiquitin carboxyl-terminal hydrolase 20 [Rhipicephalus
pulchellus]
Length = 834
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 170 PQVNLYTILTKFNNESEKE----YKTYK----ENFLKRFEITSLPPYLILYVKRFTKNTF 221
P V L L F + E + Y K N +K + LP L +++KRF
Sbjct: 445 PGVALQDCLAAFFSADELKGDNMYSCDKCCKLRNGIKYSRVLQLPEVLCIHLKRFRHEVM 504
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
F K + V+FP++ +D L E +T YDL+A I H G
Sbjct: 505 FSSKISSYVSFPLEGLDMAPFLHSECP--------------RSATTYDLMAVICHHGTAG 550
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + +WYE D +VT + PQ++ EAY+ Y
Sbjct: 551 FGHYTTYALNHLNDQWYEFDDQYVTSVEPQVVQNCEAYVLFY 592
>gi|47225852|emb|CAF98332.1| unnamed protein product [Tetraodon nigroviridis]
Length = 511
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 127/324 (39%), Gaps = 53/324 (16%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R G+SS LV+ F + + LW + ++ SP + +W F+ +Q D +F
Sbjct: 209 RSQGESSVSLVEEFRKTLCSLW--QGSQTAFSPDSLF--YTIWKIMPSFRGYQQQDAHEF 264
Query: 82 LSWFLNTLHRALNGTKKKDSSIVY-------------KTFLGSMKVKTRKIPPVELEEKV 128
+ + L+ LHR L ++ S G+ V T + L+ +V
Sbjct: 265 MRYLLDHLHRELQNSRNGASHTASPQDGVRLTAADGKCCINGTASVVTSIFGGI-LQNEV 323
Query: 129 RQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKE 188
+ TE K PFL L+ D+P K + P L L F + E +
Sbjct: 324 NCLICGTESRKF----DPFLDLSLDIPSQFRQKRSKDQEPGPTCTLSDCLRSFTDLEELD 379
Query: 189 ----YKTYK----ENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDF- 239
Y +K + K+F + LP L L++KRF F K T V FP+K +D
Sbjct: 380 DTELYFCHKCKKRQKSTKKFWVQKLPKVLCLHLKRFHWTAFLRNKIDTYVEFPLKGLDMR 439
Query: 240 GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYE 299
G +L PE + ES +YDLVA + + G++ +WY
Sbjct: 440 GYLLEPE-------------NSLPESCVYDLVAVASPSMDLAYGSHE--------DRWYH 478
Query: 300 IQDLHVTDILPQMITLTEAYIQIY 323
D VT + +AYI Y
Sbjct: 479 FNDSTVTLTSEDAVRKAKAYILFY 502
>gi|299744717|ref|XP_001831228.2| ubiquitin carboxyl-terminal hydrolase 4 [Coprinopsis cinerea
okayama7#130]
gi|298406256|gb|EAU90391.2| ubiquitin carboxyl-terminal hydrolase 4 [Coprinopsis cinerea
okayama7#130]
Length = 1108
Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 74/321 (23%), Positives = 136/321 (42%), Gaps = 39/321 (12%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
LVQ F +L+ ++W +++P + +++ + +Q+ ++Q D +FLS+ L+ +H
Sbjct: 795 LVQAFAKLVHEMWGGD--LPYLTPMDFRKSICQLN-QQYIGSDQHDSQEFLSFLLDGVHE 851
Query: 92 ALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEE------KVRQRLLLTEEYKETETES 145
LN K +V + + ++PP+ + K R ++ + + + + S
Sbjct: 852 DLNRVMVKPKIVVTP----EQEAELERLPPMIASDREWRNWKARNDSIIVD-FFQGQFRS 906
Query: 146 PFLYLTCDLPPPPLFKDEVLENIIP-----QVNLYTILTKFNNESEKEYK--------TY 192
LTC+ +L+ IP +V L L NE E
Sbjct: 907 RLQCLTCEKTSTTYNVFSILQVPIPNSRSSKVPLQRCLDALFNEEVLEKDDAWDCPQCKT 966
Query: 193 KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTP------- 245
K K + LPP L++++KRF N F +K T V FP+K++D + + P
Sbjct: 967 KRRASKTLSLARLPPILLIHLKRFEANGRFSDKIDTFVEFPMKSLDLTNYMPPPLPPGAD 1026
Query: 246 --EVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDL 303
E+ ++ D + + YDL H G S+G Y ++ + G W D
Sbjct: 1027 KSEINGGVPMSLED-PRTQVPPYKYDLYGVTNHYGNLSSGHYTAYIASR--GGWMLCDDS 1083
Query: 304 HVTDILPQMITLTEAYIQIYE 324
V I P+ + +AY+ Y+
Sbjct: 1084 SVKPIDPRQVVNQKAYVLFYK 1104
>gi|3800764|gb|AAC68865.1| ubiquitin specific protease 66 [Gallus gallus]
Length = 587
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 141/369 (38%), Gaps = 71/369 (19%)
Query: 1 ALCHVTPLRDY-----FLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
L + LRDY +LR++N R P L+ F +L++ LW S VSP
Sbjct: 63 CLSNTKELRDYCLQNQYLRDLNNNSRMRTP------LMSEFAKLIQLLWTSSPNDS-VSP 115
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVK 115
E + ++ + + +Q D +FL + L+ LH +N L +
Sbjct: 116 SEFKTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHGEVN------------RVLVRPRAN 162
Query: 116 TRKIPPVELEEKVRQRLLLTEEYKETETESPFL-----YLTCD----------------L 154
+ + +EK RQ +E +++ F+ LTC L
Sbjct: 163 ADTLDHLPDDEKSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDPFWDLSL 222
Query: 155 PPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKEN--FLKRFEITSLPPYLILY 212
P P EV ++ + L+T + + + K K+F I P L+L+
Sbjct: 223 PIPKKGYGEV--TLMDCLRLFTKEDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLH 280
Query: 213 VKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVA 272
+KRF++ K T VNFP+K++D + + +Y+L A
Sbjct: 281 LKRFSEARIRASKLTTFVNFPLKDLD----------------LREFASQSCNHAVYNLYA 324
Query: 273 NIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYEL-----RT 327
H G G Y + + +W+ D VT + + ++AY+ YEL R
Sbjct: 325 VANHSGTTMGGHYTAYCKEPHLQEWHSFNDSRVTPMSSSHVRSSDAYLLFYELASPSSRM 384
Query: 328 TPSPTAMSE 336
P+P SE
Sbjct: 385 YPAPGHPSE 393
>gi|242211549|ref|XP_002471612.1| predicted protein [Postia placenta Mad-698-R]
gi|220729288|gb|EED83165.1| predicted protein [Postia placenta Mad-698-R]
Length = 1026
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 70/320 (21%), Positives = 132/320 (41%), Gaps = 42/320 (13%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
L F ++R +W +SP +++ +++ QF TEQ D +FL++ L+ LH
Sbjct: 718 LANAFANILRDMWQGE--MQCLSPVTFRRSLCMYA-PQFGGTEQHDSQEFLNFLLDGLHE 774
Query: 92 ALNGTKKKD----------------SSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLT 135
LN +K + I + +++ + + + R RL
Sbjct: 775 DLNRVLQKPQIETTPEREAELERLPTQIAREQEWQIWRMRNDSLVVDFFQGQFRNRLECL 834
Query: 136 EEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKE------- 188
+K + T + F+YLT P P+ + +V+LY L F E E
Sbjct: 835 TCHKTSTTYNTFMYLTL---PIPIGRGS-------KVSLYQCLDAFVKEEVMEKSDAWNC 884
Query: 189 -YKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEV 247
+ K ++ LPP L++++KRF+ F +K T V++P++++D + + P +
Sbjct: 885 PHCKALRKATKNLSLSRLPPVLLIHLKRFSSKGHFTDKIETFVDYPIRSLDLTNYMPPPL 944
Query: 248 KAKYESTMY---DLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLH 304
+ + D +A+ YDL H G S+G Y + + G W D
Sbjct: 945 PPGVDMGLQPSRDDPRAQVPPYRYDLYGVTNHFGTLSSGHYTAFISSR--GGWLYCDDSR 1002
Query: 305 VTDILPQMITLTEAYIQIYE 324
++ + + AY+ Y+
Sbjct: 1003 ISQADTKDVVGKPAYMLFYK 1022
>gi|321462098|gb|EFX73124.1| hypothetical protein DAPPUDRAFT_307972 [Daphnia pulex]
Length = 338
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 127/316 (40%), Gaps = 38/316 (12%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQ-----FQFTEQSDPIDFLSWFL 86
L++ F ++ +LW + + L S+ Q F Q D +FL + L
Sbjct: 38 LIKAFAIVLAELWKKEDDDDDSYSSSAVNPTALKSQIQKFAPRFMGYNQQDAQEFLRYLL 97
Query: 87 NTLHRALNGTKKK-------------DSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLL 133
LH +N K DS +++ ++ KI + + + ++ L
Sbjct: 98 EGLHEDVNRIAVKPRPLEHDISDDLSDSEKAAESWKRYVRRDDSKIVDLFVGQ-LKSTLQ 156
Query: 134 LTEEYKETETESPFLYLTCDLPPPPLFKDEV-LENIIPQVNLYTILTKFNNESEKEYKTY 192
T + T PF L+ LP PP K V L++ + IL + + +T
Sbjct: 157 CTVCGHCSVTFDPFWDLS--LPIPPSSKSNVKLQHCLDLFGKEEILDGDEKPTCSKCQT- 213
Query: 193 KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYE 252
+ K+F I P L+L++KRF+ F + + + V+FP+ ++D +P +K
Sbjct: 214 RRKCTKKFTIHKFPQILVLHLKRFSPGERFRKLDAS-VDFPLTDLDLSAYTSPGIKPSPC 272
Query: 253 STMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQM 312
S Y L I H G +G Y H W+E D ++++ Q
Sbjct: 273 S--------------YQLYGVINHSGSAYSGHYTASCRHPFSANWHEYNDSRISNLTAQR 318
Query: 313 ITLTEAYIQIYELRTT 328
+ +EAY+ YEL +T
Sbjct: 319 VVSSEAYLLFYELEST 334
>gi|358054547|dbj|GAA99473.1| hypothetical protein E5Q_06172 [Mixia osmundae IAM 14324]
Length = 1213
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 87/322 (27%), Positives = 145/322 (45%), Gaps = 37/322 (11%)
Query: 12 FLREINYARV--KRPPGDSSFLLVQRFGELMRKLWNPR-NFKSHVSPHEMLQAVVLWSRK 68
F ++ +Y R ++ P + +L GEL++ LW NF V+P A+ ++
Sbjct: 816 FFKDGSYRRAINRQNPMGTQGVLADAVGELIKVLWTETYNF---VAPVSFRDAICRFA-P 871
Query: 69 QFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSI-----------VYKTFLGSMK---V 114
QF+ T+Q D +FL++ L+ LH LN KK + T + S K +
Sbjct: 872 QFRGTDQHDSQEFLAFLLDGLHEDLNFVVKKPRPVEMTPEREAALESLPTQVASEKEWQI 931
Query: 115 KTRKIPPVEL---EEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEV-LENIIP 170
TR+ V + + + R RL K + T F+YL+ LP P + EV L+ +
Sbjct: 932 YTRRNNSVIVNWFQGQYRNRLQCLTCGKTSTTYDTFMYLS--LPLPNKSRSEVSLQQCLD 989
Query: 171 QVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIV 230
+L K + KT ++ KR ++ LPP L+++ KRF+ F E+ T+V
Sbjct: 990 AFVKEEVLEKSEAWNCPRCKTRRKA-TKRLTLSRLPPILLIHFKRFSFKGPFSERLDTVV 1048
Query: 231 NFPVKNVDFGDILTPEVKAKYESTMYDLV------KAKYESTMYDLVANIVHDGEPSNGT 284
+P+ ++D + L P + + +Y++ A S YDL A H G S+G
Sbjct: 1049 RYPLSSLDLTNYLPPPLPPA-TANLYNVKPETVGPTASSSSYRYDLYAVSNHFGSLSSGH 1107
Query: 285 YRVHLYHKGIGKWYEIQDLHVT 306
Y + K W+ I D V+
Sbjct: 1108 YTA--FVKNNRGWWSIGDSRVS 1127
>gi|380015099|ref|XP_003691548.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Apis
florea]
Length = 915
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 22/163 (13%)
Query: 170 PQVNLYTILTKFNNESE----KEYKTYK----ENFLKRFEITSLPPYLILYVKRFTKNTF 221
P V+L+ L+ F + E Y K N +K ++ LP L +++KRF
Sbjct: 491 PVVSLHDCLSAFFSADELKGDNMYSCEKCNKLRNGIKFSKVLELPEILCVHLKRFRHELM 550
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
F K V+FP++ +D L E +K TMYDL++ I H G
Sbjct: 551 FSSKIANYVSFPLEGLDMRPYLHKECVSKV--------------TMYDLISVICHHGTAG 596
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
G Y + + + KW+E D VT++ + + EAY+ Y+
Sbjct: 597 GGHYTCYALNPIVNKWFEFDDQCVTEVSSETVKHCEAYVLFYK 639
>gi|145545853|ref|XP_001458610.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426431|emb|CAK91213.1| unnamed protein product [Paramecium tetraurelia]
Length = 503
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 147/344 (42%), Gaps = 47/344 (13%)
Query: 1 ALCHVTPLRDYFLREINYARVK-RPPGDSSFLLVQRFGELMRKLWNPRNFKSH-----VS 54
AL + PL DYF+ +++ + P S +V+ F +L+R LW + + +
Sbjct: 85 ALSNTQPLTDYFMSQLHIKEINPENPLSSQGNIVKSFAQLIRLLWQKVDQYQYDDMKVLK 144
Query: 55 PHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK--------------- 99
P + + V ++ F Q D +F+++ L+ +H LN KKK
Sbjct: 145 PTQFISTVGNYN-PIFAEGTQEDAHEFIAFLLDMIHEDLNRIKKKPYVEQAKFTKFPTNE 203
Query: 100 DSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPL 159
D+ +K +L + + ++ + + + Y PF+YL+ P L
Sbjct: 204 DADAEWKKYLSRNQSIIVDLFQGQMLDTLSCLTCKSSRY----CFEPFMYLSV----PVL 255
Query: 160 FKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKN 219
++ L+ I + L K + + + K+ ++ S+P LI+++KRF N
Sbjct: 256 NRECELQECIEEF-LKKETLKGDEGWNCTNCNQRRDSNKKIDLWSMPNILIIHLKRFKFN 314
Query: 220 TFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGE 279
+ F K ++V +P++N+ F +++ + + E YDL A I H G
Sbjct: 315 SQFRAKIRSLVKYPLQNLSFENLVCTK---------------QVEKPTYDLYAVINHSGT 359
Query: 280 PSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
++G Y + ++ WY D VT + Q +L +AY+ Y
Sbjct: 360 LTSGHYTAYGKNRDDLHWYHFNDSLVTPV-QQPESLNDAYLLFY 402
>gi|358341643|dbj|GAA49264.1| ubiquitin carboxyl-terminal hydrolase 2 [Clonorchis sinensis]
Length = 655
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 120/311 (38%), Gaps = 40/311 (12%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
L + LM +LW+P F+S SP + + ++ + +++Q D +FL + L LH
Sbjct: 366 LFTAYASLMNELWDPEMFESSTSPMQFKTQIQRFAPRFVGYSQQ-DSQEFLRYVLEGLHN 424
Query: 92 ALNGTKKKDSSIVYKTFLGSMKVKTR-----------KIPPVELEEKVRQRLLLTEEYKE 140
+N K+ + + K+ R + + + +L+ T E E
Sbjct: 425 EVNRVTKRPHPVT-PDYAAEDKLADRDKADLYWKRYLSMDNSAIVDLFVGQLMSTLECAE 483
Query: 141 TETES----PFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYK--E 194
+S PF L+ +P K V NI+ + L+T + K
Sbjct: 484 CGFKSTTFDPFWDLSLPIPK----KANV--NIMDCLRLFTSKEDLDGHERPMCGRCKVRR 537
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
K F + P L+L++KRF+ F K +V++P+ +++ + +P + +Y
Sbjct: 538 RCTKHFSLQKFPRILVLHLKRFSGERF-RSKMSVLVDYPLNDLNLSEFASPSCQQRY--- 593
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
Y+L A H G G Y H WY+ D V Q +
Sbjct: 594 -----------ARYNLYAVSNHSGSVYAGHYTAICRHHYRNSWYDYNDSRVRPTSTQSVV 642
Query: 315 LTEAYIQIYEL 325
E Y+ YEL
Sbjct: 643 SAEGYVLFYEL 653
>gi|213983223|ref|NP_001135522.1| ubiquitin specific peptidase 2 [Xenopus (Silurana) tropicalis]
gi|195540057|gb|AAI67952.1| Unknown (protein for MGC:147993) [Xenopus (Silurana) tropicalis]
Length = 383
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 135/338 (39%), Gaps = 37/338 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L + LRDY L+ N R + +++ F L++ +W + VSP E
Sbjct: 63 CLSNTKDLRDYCLQ--NSYRRDLSSKKCNTAIMEEFARLLQAIWTS-SANEVVSPSEFKT 119
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALN--GTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ +F Q D +FL + L+ LH +N K + SS S K K
Sbjct: 120 QIQKYA-PRFMGYNQQDAQEFLRFLLDGLHNEVNRVTVKPRPSSQDLDHMPDSEKGKHMW 178
Query: 119 IPPVELEE---------KVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENII 169
+E E+ +++ L TE + PF DL P K +++
Sbjct: 179 KRYLEREDSRIVELFVGQLKSSLTCTECGYCSTVFDPFW----DLSLPIAKKSASEVSLV 234
Query: 170 PQVNLYTILTKFNNESE--KEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNP 227
+ L+T + + + + K+F I P L+L++KRF++ K
Sbjct: 235 DCMRLFTKEDVLDGDEKPTCCRCKARRRCTKKFTIQKFPKILVLHLKRFSEGRIRSGKLS 294
Query: 228 TIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRV 287
T VNFP+K++D + + ES + Y+L A H G G Y
Sbjct: 295 TFVNFPLKDLDLREFSS-------ESNPH---------ATYNLYAVSNHSGTTMGGHYTA 338
Query: 288 HLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYEL 325
+ + G+WY D VT + + ++AY+ YEL
Sbjct: 339 YCKNPSNGEWYTFNDSRVTAMSSNQVRSSDAYVLFYEL 376
>gi|340508522|gb|EGR34211.1| ubiquitin specific peptidase 8, putative [Ichthyophthirius
multifiliis]
Length = 547
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 145/349 (41%), Gaps = 50/349 (14%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPG--DSSFLLVQRFGELMRKLWN-PRNFKSHVSPHE 57
L + PL DYFL +++ + P S+ + +FG+L+ LW +NF + P +
Sbjct: 98 CLSNTPPLCDYFLSQLHEKEI-NPNAFLGSNGQITSQFGKLILDLWQTDQNF---IEPID 153
Query: 58 MLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTR 117
+ + ++ +QF Q D +FL++ L+ LH LN ++ K ++
Sbjct: 154 FINEIGQFA-EQFADGTQQDSHEFLAFLLDILHEDLN-------RVIKKPYIKEKDYNCE 205
Query: 118 KIPPVELEE----KVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQ-- 171
K E +R + ++ + + + +T+S L C + L +P
Sbjct: 206 KHEEYSKESWKEYLMRNKSIIVDLF-QGQTKSTLKCLVCGSVSHKFEAFQFLSVPVPANK 264
Query: 172 -----VNLYTILTKFNNESEKEYKTYKENF--------LKRFEITSLPPYLILYVKRFTK 218
+NL + +F E + + F K+ ++ LP LI+++KRF
Sbjct: 265 SHNEIINLSECIQEFTKEEYLDQNEWWYCFKCKKNRKSTKQIDLWKLPNILIIHLKRFRF 324
Query: 219 NTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG 278
+ K V+FP++N D L P Y + + + + +YDL A H+G
Sbjct: 325 DKNIKAKIKNFVDFPIQNFD----LQP----------YTIGRQR-DQPIYDLFAISNHEG 369
Query: 279 EPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRT 327
S+G Y + ++ WY D +V L + I +AY+ Y T
Sbjct: 370 NLSSGHYTAYAKNRANQNWYLFDDCNVQQCLKEQIKSEKAYVLFYSKTT 418
>gi|328778708|ref|XP_001122214.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like, partial
[Apis mellifera]
Length = 867
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 22/163 (13%)
Query: 170 PQVNLYTILTKF--------NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTF 221
P V+L+ L+ F +N E N +K ++ LP L +++KRF
Sbjct: 443 PVVSLHDCLSAFFSADELKGDNMYSCEKCNKLRNGIKFSKVLELPEILCVHLKRFRHELM 502
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
F K V+FP++ +D L E +K TMYDL++ I H G
Sbjct: 503 FSSKIANYVSFPLEGLDMRPYLHKECVSKV--------------TMYDLISVICHHGTAG 548
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
G Y + + + KW+E D VT++ + + EAY+ Y+
Sbjct: 549 GGHYTCYALNPIVNKWFEFDDQCVTEVSSETVKHCEAYVLFYK 591
>gi|426379399|ref|XP_004056385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gorilla gorilla
gorilla]
Length = 724
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 126/314 (40%), Gaps = 45/314 (14%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDFLSWFLNTLH 90
LV+ F + + LW + ++ SP + V+W F+ +Q D +F+ + L+ LH
Sbjct: 422 LVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 477
Query: 91 RALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYK 139
L G S S K + I L+ +V + TE K
Sbjct: 478 LELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRK 537
Query: 140 ETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEYKTY------ 192
PFL L+ D+P K + P +L L F + E E + Y
Sbjct: 538 F----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCK 593
Query: 193 -KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAK 250
K+ K+F I LP L L++KRF + K T V FP++ +D +L PE
Sbjct: 594 KKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPE---- 649
Query: 251 YESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEIQDLHVTDIL 309
+ ES +YDL A +VH G +G Y + H+ G+W+ D VT
Sbjct: 650 ---------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFHFNDSTVTLTD 698
Query: 310 PQMITLTEAYIQIY 323
+ + +AYI Y
Sbjct: 699 EETVVKAKAYILFY 712
>gi|428180637|gb|EKX49504.1| hypothetical protein GUITHDRAFT_47981, partial [Guillardia theta
CCMP2712]
Length = 316
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 120/317 (37%), Gaps = 50/317 (15%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDS-SFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L V P RD+FL N+ + G S L FGEL+ K+W P+ +
Sbjct: 20 CLAAVPPFRDFFLS--NHHIFRLDTGSSMRGTLALSFGELLHKIWQGE-------PYSSV 70
Query: 60 QAVVLWSR-----KQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKV 114
A +L R QF Q D +FL + L+ LH L + + + + +V
Sbjct: 71 SAAILKDRVSKFAPQFTGCRQHDSQEFLRFLLDGLHEDLKTSDNDEMRQFMEVRMAHDQV 130
Query: 115 KTR---KIPPVEL---------EEKVRQRLLLTEEYKETETES----PFLYLTCDLPPPP 158
++ +P +E+ +L+ E + +S PFL ++ +P P
Sbjct: 131 ASKYNESMPAMEMYCLDNLSCVTAAFGGQLVSQIECRTCSHQSRCYDPFLDISLPIPSPS 190
Query: 159 LFKDEVLENIIPQVNLYTILTKFNN----ESEKEYKTYKEN----FLKRFEITSLPPYLI 210
FK+ + P+ +L F E E Y N K+ + SLPP L+
Sbjct: 191 QFKEGQEQAHRPRCHLTDCFNLFTEKEVLEGENMYSCPNCNSRSCATKQLKFVSLPPILV 250
Query: 211 LYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDL 270
L++KRF+ EK T + FP +D + E +YDL
Sbjct: 251 LHIKRFSYTEVSREKLVTSLEFPKAGLDLSPFAVETGSGEREYP-----------PIYDL 299
Query: 271 VANIVHDGEPSNGTYRV 287
+ +H G + G Y
Sbjct: 300 KSVALHVGGMAGGHYHA 316
>gi|427795287|gb|JAA63095.1| Putative ubiquitin c-terminal hydrolase posttranslational
modification, partial [Rhipicephalus pulchellus]
Length = 929
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 15/136 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP LI+++KRF+ N F+ +K T V+FP+ ++ D +
Sbjct: 781 KKFDLWSLPRVLIIHLKRFSYNRFWRDKIDTHVDFPITDLCMDDYI-------------- 826
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+ K+E +YDL+A H G G Y + +K KWY D V+ +
Sbjct: 827 -INRKHERAVYDLIAVANHYGGMGAGHYTAYAKNKETHKWYHFDDSSVSSATEDNVVSKA 885
Query: 318 AYIQIYELRTTPSPTA 333
AY+ Y R + T+
Sbjct: 886 AYVLFYMRRDSGDRTS 901
>gi|114053169|ref|NP_001039728.1| ubiquitin carboxyl-terminal hydrolase 2 [Bos taurus]
gi|122135912|sp|Q2KHV7.1|UBP2_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|86438174|gb|AAI12867.1| Ubiquitin specific peptidase 2 [Bos taurus]
gi|296480118|tpg|DAA22233.1| TPA: ubiquitin specific peptidase 2 [Bos taurus]
gi|440904915|gb|ELR55367.1| Ubiquitin carboxyl-terminal hydrolase 2 [Bos grunniens mutus]
Length = 606
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 142/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 285 CLSNTRELRDYCLQRL-YLRDLSHSSRAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 340
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 341 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVIARPKSNTENLDHLPDDEKGRQ 399
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 400 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPITKRGYPEVTLMDC 459
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K
Sbjct: 460 MRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTAF 519
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 520 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 563
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D V+ + + ++AY+ YEL + PS
Sbjct: 564 RSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFYELASPPS 604
>gi|402874297|ref|XP_003900978.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase
8 [Papio anubis]
Length = 1109
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 143/343 (41%), Gaps = 50/343 (14%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 785 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 838
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKT----FLGS 111
+ + + QF Q D + L + ++ LH LN K D+ YK L
Sbjct: 839 KD-FKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLN---KADNRKRYKEENNEHLDD 894
Query: 112 MKVK----------TRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK 161
K I + + + + +K++ T F+YL+ LP K
Sbjct: 895 FKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLS--LPLASTSK 952
Query: 162 DEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTF 221
L++ + + LT NN + + + LK+ EI LPP L++++KRF+ +
Sbjct: 953 C-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGR 1010
Query: 222 FVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP 280
+ +K T V+FP++N+D ++ P+ K Y+L + H G
Sbjct: 1011 WKQKLQTSVDFPLENLDLSQYVIGPKNNLK----------------KYNLFSVSNHYGGL 1054
Query: 281 SNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + +W++ D V+DI + + AYI Y
Sbjct: 1055 DGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFY 1097
>gi|194034734|ref|XP_001927765.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Sus scrofa]
Length = 1117
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 143/355 (40%), Gaps = 74/355 (20%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 793 CLCNAPHLADYFNRNCYQEDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 846
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT------------------- 96
+ + + QF Q D + L + ++ LH LN
Sbjct: 847 KD-FKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKA 905
Query: 97 --------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFL 148
K+ + SI+ F G K + + +K++ T F+
Sbjct: 906 AEYAWQKHKQLNESIIVALFQGQFKSTVQCLTC----------------HKKSRTFEAFM 949
Query: 149 YLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPY 208
YL+ LP K L++ + + LT NN + + + LK+ EI LPP
Sbjct: 950 YLS--LPLASTSKC-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPV 1005
Query: 209 LILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMY 268
L++++KRF+ + + +K T V+FP++N+D A+Y ++ K Y
Sbjct: 1006 LLVHLKRFSYDGRWKQKLQTSVDFPLENLDL---------AQY------VIGPKNNLKKY 1050
Query: 269 DLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
+L + H G G Y + + +W++ D V+DI + + AYI Y
Sbjct: 1051 NLFSVSNHYGGLDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFY 1105
>gi|125817446|ref|XP_001337596.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
rerio]
gi|125817457|ref|XP_692507.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
rerio]
Length = 398
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 137/343 (39%), Gaps = 41/343 (11%)
Query: 1 ALCHVTPLRDYFLREI------NYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVS 54
L + LRDY LR N R K L+ F +L + +W + ++ +S
Sbjct: 79 CLSNTHDLRDYCLRNTHRTDLNNNCRAKAA-------LMDEFAKLTQTIWTSASNEA-IS 130
Query: 55 PHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKV 114
P + + ++ + + +Q D +FL + L+ LH +N K + V S
Sbjct: 131 PSDFKMQIQKYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTVKSRAPVEDLDHLSEDE 189
Query: 115 KTRKIPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPP-----PPLFKDEVLENI 168
K +++ LE E + L + K + T S + + P P+ K ++
Sbjct: 190 KGKRMWNKYLESEDSKVVDLFVGQLKSSLTCSECGFCSTVFDPFWDLSLPIAKTSGEVSL 249
Query: 169 IPQVNLYT---ILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEK 225
+ L+T +L + KT ++ K+F I P L+L++KRF++ K
Sbjct: 250 NDCLRLFTKEDVLDGNERPTCHRCKTRRK-CTKKFTIQKFPKILVLHLKRFSECRVRTSK 308
Query: 226 NPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTY 285
T VNFP+K +D + + + +Y+L A H G G Y
Sbjct: 309 LSTFVNFPLKELD----------------LREFASDNSVNAVYNLYAVSNHTGTSLGGHY 352
Query: 286 RVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTT 328
+ G+WY D V+ + + ++AY+ YE T+
Sbjct: 353 TAYCRSPCTGEWYTYNDSRVSPMSSSQVCSSDAYVLFYECATS 395
>gi|403160479|ref|XP_003320979.2| hypothetical protein PGTG_02021 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170264|gb|EFP76560.2| hypothetical protein PGTG_02021 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1235
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 148/364 (40%), Gaps = 73/364 (20%)
Query: 1 ALCHVTPLRDYFLREINYARV--KRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEM 58
L PL +F ++ +Y R + P + LL + EL+R LW + + VSP
Sbjct: 906 CLSATIPLARFF-KDGSYKRCINRTNPLGTQGLLAESVAELVRVLWGAQ--YTFVSPITF 962
Query: 59 LQAVVLWSRKQFQFTEQSD---------PIDFL---SWFLNTLHRALNGTK------KKD 100
A+ ++ K F+ ++Q D P++ L TL + K ++D
Sbjct: 963 KDAICRFAPK-FRGSDQQDAQGSPNKPPPLEMTPEREAALETLPTQIASAKEWEIYKRRD 1021
Query: 101 SSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLF 160
+S++ + F G + R RL + T + F+YL+ +P
Sbjct: 1022 NSVIVELFQG----------------QYRSRLQCLTCNTTSTTYNTFMYLSLPIP----- 1060
Query: 161 KDEVLENIIPQVNLYTILTKFNNES--EKE-------YKTYKENFLKRFEITSLPPYLIL 211
+ I +V+L L F E EK+ KT ++ KR + LPP L++
Sbjct: 1061 ----NKRGISKVSLTQCLDAFLKEEIMEKDDAWNCPKCKTRRK-ATKRLSLAKLPPILLI 1115
Query: 212 YVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTP---------EVKAKYESTMYDLVKAK 262
++KRF+ F +K T V +P+ +D + P E+K YE ++
Sbjct: 1116 HLKRFSFKGPFSDKLETFVQYPLYGLDLSSYVPPPLSPAALSNELKPVYEDVA---TRSS 1172
Query: 263 YESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQI 322
ES +YDL A H G S+G Y + + WY I D V+ + + AY+
Sbjct: 1173 PESNIYDLYAVCNHFGSLSSGHYTA--FARSQKDWYNIGDSRVSKTDEKSVKARSAYLLC 1230
Query: 323 YELR 326
+ R
Sbjct: 1231 FRRR 1234
>gi|322800359|gb|EFZ21363.1| hypothetical protein SINV_03789 [Solenopsis invicta]
Length = 918
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 22/163 (13%)
Query: 170 PQVNLYTILTKFNNESE----KEYKTYK----ENFLKRFEITSLPPYLILYVKRFTKNTF 221
P V+L+ L+ F + E Y K N +K ++ LP L +++KRF
Sbjct: 495 PVVSLHDCLSAFFSADELKGDNMYSCEKCNKLRNGIKFSKVLELPEILCIHLKRFRHELM 554
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
F K V+FP++ +D L E +K T Y+L++ I H G
Sbjct: 555 FSSKIANYVSFPLEGLDMRPYLHKECISKV--------------TTYNLISVICHHGTAG 600
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
G Y + + KWYE D VT++ P+ + EAY+ Y+
Sbjct: 601 GGHYTCYALNPIANKWYEFDDQCVTEVSPETVKHCEAYVLFYK 643
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 1 ALCHVTPLRDYFL---REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHE 57
AL +V+PL +FL ++Y R PG L + L+R +WN + + +V PH
Sbjct: 202 ALSNVSPLTQFFLDCGHMVSYMSKDRKPG-----LSLNYLNLIRDMWNKKT-RGYVVPHG 255
Query: 58 MLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRAL 93
+L + F+ Q D +FL F++ LH L
Sbjct: 256 ILSGIRT-VHPMFRGYHQHDTQEFLRCFMDQLHEEL 290
>gi|299744855|ref|XP_001831310.2| ubiquitin-specific protease [Coprinopsis cinerea okayama7#130]
gi|298406320|gb|EAU90473.2| ubiquitin-specific protease [Coprinopsis cinerea okayama7#130]
Length = 1315
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMY 256
K+F++ P L++++KRF+ N +K T V+FPV+ +D GD + V + +
Sbjct: 983 KKFDLWKAPDILVVHLKRFSNNRILRDKIDTFVDFPVEGLDLGDKVGERAVATRLKEQGV 1042
Query: 257 DLVKAKY----ESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQM 312
+L + K E +YDL A H G G YR + + GKWY D +V +
Sbjct: 1043 ELEELKTVNLDEPLVYDLFAVDEHMGGLGGGHYRAYASNHLTGKWYHFDDGYVKQASAEE 1102
Query: 313 ITLTEAYIQIYELRTT 328
+ AY+ Y R++
Sbjct: 1103 SVNSNAYLLFYRRRSS 1118
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L H L +YFL + A + R P + + FG L+ ++W + SP E
Sbjct: 433 CLAHTKELTEYFLNGVFKAELNRDNPLGMQGQIAEVFGALLERIWASSGPSTSYSPREFK 492
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK------------DSSIV--- 104
Q + ++ QF +Q D + +++ L+ LH LN KK D+ +V
Sbjct: 493 QTLQRFA-PQFSGYQQHDSQELVAFLLDGLHEDLNRVIKKPYVEKPDWEGGGDAELVKLA 551
Query: 105 YKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETE-TESPFLYLTCDLP 155
K++ G M I V+L + Q L+ E ++ T PF+YLT LP
Sbjct: 552 AKSWEGYMLRNDSVI--VDLFQGQYQSTLVCPECEKISITFDPFMYLTLPLP 601
>gi|395503246|ref|XP_003755981.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
isoform 2 [Sarcophilus harrisii]
Length = 371
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 131/347 (37%), Gaps = 54/347 (15%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
LC +TPL +YFL +++ G+++ F LM +W + VSP E+ +
Sbjct: 59 CLCSITPLVEYFLSGKYITALQKDSGEAA----TAFAYLMTDMWLGDS--DCVSP-EVFR 111
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKT-RKI 119
A + F Q D +FL + LN LH AL ++K KT + K RK+
Sbjct: 112 AAIGKIYPAFLKRTQQDAQEFLIYVLNELHEALKKYRRK------KTQENGLSTKCYRKV 165
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENI---IP---QVN 173
E + RL E + + L C+ +K+EV + IP + +
Sbjct: 166 --ASSESSIITRLF------EGQLNYDIVCLKCE---NCTYKNEVFTVLSLPIPSECECS 214
Query: 174 LYTILTKF--------NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEK 225
L L F NN+ + K++ R I P +I ++KRF K
Sbjct: 215 LQECLGCFFQQDTLTWNNQIHCAFCESKQDAAVRASIAKAPKTVIFHLKRFDCQGRVKRK 274
Query: 226 NPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTY 285
T +++P+ N+D + P + + Y L + H G+ G Y
Sbjct: 275 LRTDIHYPLNNLDLSPYIYPLFR---------------KHPKYSLCGVVNHFGDLDGGHY 319
Query: 286 RVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
+ WY D V +I + AY+ Y + PT
Sbjct: 320 TAFCKNTVNQTWYSFDDTRVCEIPDSAVQTAAAYLLFYSCQPFSIPT 366
>gi|443694057|gb|ELT95284.1| hypothetical protein CAPTEDRAFT_97991, partial [Capitella teleta]
Length = 841
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 22/162 (13%)
Query: 170 PQVNLYTILTKFNNESE----KEYKTYK----ENFLKRFEITSLPPYLILYVKRFTKNTF 221
P + L L F +E E Y K N K ++ LP L +++KRF
Sbjct: 454 PVIGLQDCLAAFFSEDELKGDNMYSCEKCKKLRNGKKYSKVMRLPEILCIHLKRFRHEFM 513
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
F K + V+FP++N+D G L + + + T YDLVA I H G
Sbjct: 514 FSTKINSYVSFPLENLDMGPYLHKDCENQV--------------TTYDLVAVICHHGTAG 559
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + +WYE D +VT++ Q + EAY+ Y
Sbjct: 560 GGHYTSYALNHLSQQWYEFDDQYVTEVDLQQVENCEAYVLFY 601
>gi|344297764|ref|XP_003420566.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Loxodonta africana]
Length = 367
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 131/340 (38%), Gaps = 53/340 (15%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
LC ++PL +YFL +++ G+ + F LM +W + VSP E+ +
Sbjct: 61 CLCSISPLVEYFLSGKYITALQKSCGE----VATAFAYLMTDMWLGDS--GCVSP-EIFR 113
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+ + F Q D +FL + LN LH AL ++ Y+ GS + RK+
Sbjct: 114 SALGNLYPAFMKKTQQDAQEFLIYVLNDLHEALKKYHRRS----YEK--GSTRRCCRKV- 166
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENI---IP---QVNL 174
+ E + RL E + + L C+ +K+EV + IP + +L
Sbjct: 167 -IATESSIITRLF------EGQLNYDVICLKCENCS---YKNEVFTVLSLPIPSEYECSL 216
Query: 175 YTILTKF--------NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKN 226
L F NN+ + K+ R I+ P +I ++KRF K
Sbjct: 217 QDCLQCFFQQDTLTWNNQIHCSFCETKQETAVRASISKAPKIIIFHLKRFDVQGTMKRKL 276
Query: 227 PTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYR 286
T +++P+ N+D + P + + Y L A + H G+ G Y
Sbjct: 277 RTHIHYPLTNLDLTPYICPIFR---------------KHPKYSLCAVVNHFGDLDGGHYT 321
Query: 287 VHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
+ WY D V++I + AY+ Y +
Sbjct: 322 AFCRNSVTQAWYSFDDTRVSEIPNTSVQTATAYLLFYSCQ 361
>gi|332026284|gb|EGI66421.1| Ubiquitin carboxyl-terminal hydrolase 33 [Acromyrmex echinatior]
Length = 918
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 22/163 (13%)
Query: 170 PQVNLYTILTKFNNESE----KEYKTYK----ENFLKRFEITSLPPYLILYVKRFTKNTF 221
P V+L+ L+ F + E Y K N +K ++ LP L +++KRF
Sbjct: 495 PVVSLHDCLSAFFSADELKGDNMYSCEKCNKLRNGIKFSKVLELPEILCVHLKRFRHELM 554
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
F K V+FP++ +D L E +K T Y+L++ I H G
Sbjct: 555 FSSKIANYVSFPLEGLDMRPYLHKECVSKI--------------TTYNLISVICHHGTAG 600
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
G Y + + KWYE D VT++ P+ + EAY+ Y+
Sbjct: 601 GGHYTCYALNPIANKWYEFDDQCVTEVSPETVKHCEAYVLFYK 643
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 1 ALCHVTPLRDYFL---REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHE 57
AL +V+PL +FL +NY R PG L + L+R +WN + + +V PH
Sbjct: 202 ALSNVSPLTQFFLDCGHMVNYMSKDRKPG-----LSLNYLNLIRDMWNKKT-RGYVVPHG 255
Query: 58 MLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSI 103
+L + F+ Q D +FL F++ LH L + D I
Sbjct: 256 ILSGIRT-VHPMFRGYHQHDTQEFLRCFMDQLHEELKEHIEDDRDI 300
>gi|145491367|ref|XP_001431683.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398788|emb|CAK64285.1| unnamed protein product [Paramecium tetraurelia]
Length = 451
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 134/350 (38%), Gaps = 41/350 (11%)
Query: 2 LCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPH---- 56
L ++ PL DYF+ + + R P + L F L++ LW K V
Sbjct: 103 LSNLQPLSDYFIEDFQLTEINRKNPISTQGLATVAFANLIKSLWQMDIQKLTVKGTPIII 162
Query: 57 -EMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVK 115
E ++ + K F Q D +FL + L+ +H LN S+ + + G +
Sbjct: 163 PEEFNKIIGYCNKSFSDNTQQDAQEFLMYLLDMIHEDLNRVTFPIKSVQLREYSGDCNQR 222
Query: 116 TRKIPPVELEEKVRQRL------LLTEEYKE----------TETESPFLYLTCDLPPPPL 159
+ E QR L+ ++K T P +YL+ +P P
Sbjct: 223 ELEKQAAETWGDYLQRSKSIIVDLMQGQFKNSLKCLSCDNYTYKFEPLMYLS--VPIPES 280
Query: 160 FKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKN 219
+ +++E I V + E +K + +K+ ++ LP LI+++KRF
Sbjct: 281 EECQLIECIKEYVKEEQLTNGNQWFCENCHKLV--DAIKKIDLWKLPTILIIHLKRFKFI 338
Query: 220 TFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGE 279
++K +NFP+++++ L K + E +Y+L+ I H G
Sbjct: 339 ENGIKKIEQAINFPMESLNLSQCLP---------------KLQKEKPIYELLGVICHTGT 383
Query: 280 PSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTP 329
G Y + K WY D V + I +AY+ +Y T P
Sbjct: 384 SDRGHYYTYARSKENFNWYLFNDRQVKQVNFTEIPQEDAYLLMYGKSTIP 433
>gi|327265717|ref|XP_003217654.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Anolis
carolinensis]
Length = 908
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 20/140 (14%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP+++++ + + + Y
Sbjct: 768 KKFDLWSLPRILVVHLKRFSYNRYWRDKLDTVVEFPIRDLNMSEFVCDPAASPY------ 821
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D V+ + I
Sbjct: 822 ---------VYDLIAVSNHYGGMGVGHYTAYAKNKINGKWYYFDDSSVSPASEEQIVTKA 872
Query: 318 AYIQIYE-----LRTTPSPT 332
AY+ Y+ L+ PSP
Sbjct: 873 AYVLFYQRRDDKLQRNPSPC 892
>gi|444722556|gb|ELW63246.1| Ubiquitin carboxyl-terminal hydrolase 2 [Tupaia chinensis]
Length = 395
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 142/341 (41%), Gaps = 32/341 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R + L++ F +L++ +W +P + VSP E
Sbjct: 74 CLSNTRELRDYCLQRL-YLRDLSHSSSTHTALMEEFAKLIQAIWTSSPNDV---VSPSEF 129
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + K R+
Sbjct: 130 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTARPKPSPENLDHLPDDEKGRQ 188
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + + + P + + P+V L
Sbjct: 189 MWRRYLEREDSRIGDLFVGQLKSSLTCTDCGFCSTVFDPFWDLSLPIAKRGYPEVTLMDC 248
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 249 MRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 308
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 309 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 352
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G+W+ D V+ + + ++AY+ YEL + PS
Sbjct: 353 RSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFYELASPPS 393
>gi|449471131|ref|XP_002197001.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Taeniopygia
guttata]
Length = 1087
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 140/340 (41%), Gaps = 44/340 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFL-----LVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L +YF R + A + R S+FL + + FG +M+ LW + +K ++SP
Sbjct: 763 CLCNAPHLAEYFNRNLYQADINR----SNFLGHKGEVAEEFGVIMKALWAGQ-YK-YISP 816
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIV 104
+ + + QF Q D + L + ++ LH LN + D S
Sbjct: 817 KD-FKITIGKINDQFSGYSQQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDSSA 875
Query: 105 YKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEV 164
+ K I + + + + +K + T F+YL+ L
Sbjct: 876 AEIAWHKHKQLNESIIVALFQGQFKSTVQCLTCHKRSRTFEAFMYLSLPLASSSKC---T 932
Query: 165 LENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVE 224
L+ + + LT N KT +++ LK+ EI LPP L++++KRF+ + + +
Sbjct: 933 LQECLRLFSKEEKLTDNNRFYCSHCKTRRDS-LKKIEIWKLPPVLLVHLKRFSYDGRWKQ 991
Query: 225 KNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNG 283
K T V+FP++ +D ++ P+ K Y+L + H G G
Sbjct: 992 KLQTSVDFPLETLDLSQYVIGPKTSLK----------------RYNLFSVSNHYGGLDGG 1035
Query: 284 TYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
Y + + +W++ D V++I + + AYI Y
Sbjct: 1036 HYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFY 1075
>gi|344235361|gb|EGV91464.1| Ubiquitin carboxyl-terminal hydrolase 11 [Cricetulus griseus]
Length = 342
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ + F EK T+
Sbjct: 165 IKLFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKFSREKLDTL 224
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K K EST D+ K YDL+A H G +G Y
Sbjct: 225 VQFPIRDLDFSEFV---IKPKNESTP-DMYK-------YDLIAVSNHYGGMRDGHYTTFA 273
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 274 CNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 308
>gi|348521962|ref|XP_003448495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like
[Oreochromis niloticus]
Length = 911
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 14/130 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ SLP L +++KRF F K T V+FP++ +D L + A
Sbjct: 567 NGVKFCKMQSLPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSSA----- 621
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
++T YDL++ I H G SNG Y + + WYE D VT++ +
Sbjct: 622 ---------QTTSYDLLSVICHHGTASNGHYIAYCRNDVNNLWYEFDDQSVTEVSEACVQ 672
Query: 315 LTEAYIQIYE 324
EAY+ Y+
Sbjct: 673 NAEAYVLFYK 682
>gi|158293588|ref|XP_314931.4| AGAP008805-PA [Anopheles gambiae str. PEST]
gi|157016781|gb|EAA10095.4| AGAP008805-PA [Anopheles gambiae str. PEST]
Length = 634
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 121/309 (39%), Gaps = 52/309 (16%)
Query: 50 KSHVSPHEMLQAVVLWSR-KQFQFTEQSDPIDFLSWFLNTLHRAL---------NGTKKK 99
KS +SP + +V+W QF+ Q D +FL + L+ LH L G K
Sbjct: 308 KSAISPECLF--LVIWKVVPQFRGHRQHDAHEFLRYMLDRLHTELQQVSFPVELGGPKSG 365
Query: 100 DSSIVYK-TFLGSMKVKTRKIPPVELEEKVRQ---RLLLTEEYKETETESPFLYLTCDLP 155
+ Y + L ++ K R + V Q R L+ E++ PFL L+ D+P
Sbjct: 366 EHKNPYNVSGLSHLQAKGRNSIVTNVFGGVLQSEVRCLICG--MESKKHDPFLDLSLDIP 423
Query: 156 PPPLFKDEVLENI---------IPQVNLYTILTKFNNESE-KEYKTY-------KENFLK 198
K+ + P ++ L+ F E E + Y K+ K
Sbjct: 424 EKYYSKEHGADGTNGADGGGGAAPVCHISDCLSSFTEVEELAETELYYCNSCKCKQKSTK 483
Query: 199 RFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDIL---TPEVKAKYESTM 255
RF I LP L L++KRF N F+ K + FP+ +D + PE +
Sbjct: 484 RFWIRRLPNVLCLHIKRFRWNNFYRTKIDLRIAFPINALDMSQFVLNNGPETR------- 536
Query: 256 YDLVKAKYESTMYDLVANIVHDGEPSN-GTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
++ +YDL A IVH G S+ G Y + G+ W D V ++ +
Sbjct: 537 ----RSNSSCNIYDLAAVIVHHGNGSSCGHYTSFAINNGV--WMHFNDHTVKEVSSTAVA 590
Query: 315 LTEAYIQIY 323
+ YI Y
Sbjct: 591 ECKPYILFY 599
>gi|149691949|ref|XP_001501973.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Equus
caballus]
Length = 1117
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 148/367 (40%), Gaps = 79/367 (21%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 793 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 846
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT------------------- 96
+ + + QF Q D + L + ++ LH LN
Sbjct: 847 KD-FKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKA 905
Query: 97 --------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFL 148
K+ + SI+ F G K + LT +K++ T F+
Sbjct: 906 AEHAWQKHKQLNESIIVALFQGQFKSTVQ---------------CLTC-HKKSRTFEAFM 949
Query: 149 YLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPY 208
YL+ LP K L++ + + LT NN + + + LK+ EI LPP
Sbjct: 950 YLS--LPLASTSKC-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPV 1005
Query: 209 LILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTM 267
L++++KRF+ + + +K T V+FP++N+D ++ P+ K
Sbjct: 1006 LLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLK----------------K 1049
Query: 268 YDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRT 327
Y+L + H G G Y + + +W++ D V+DI + + AYI Y T
Sbjct: 1050 YNLFSVSNHYGGLDGGHYTAYCKNAARQRWFKFDDHEVSDIAVSSVKSSAAYILFY---T 1106
Query: 328 TPSPTAM 334
+ P A+
Sbjct: 1107 SLGPRAI 1113
>gi|47210494|emb|CAF91634.1| unnamed protein product [Tetraodon nigroviridis]
Length = 842
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 14/130 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ +LP L +++KRF F K T V+FP++ +D L +
Sbjct: 549 NGVKFCKMQNLPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKD-------- 600
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
+ ++T YDL++ I H G S+G Y + + G WYE D VT++ +
Sbjct: 601 ------SSCQTTNYDLLSVICHHGTASSGHYIAYCRNDGNNLWYEFDDHRVTEVSESCVQ 654
Query: 315 LTEAYIQIYE 324
EAY+ Y+
Sbjct: 655 NAEAYVLFYK 664
>gi|354507974|ref|XP_003516029.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like, partial
[Cricetulus griseus]
Length = 340
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ + F EK T+
Sbjct: 163 IKLFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKFSREKLDTL 222
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K K EST D+ K YDL+A H G +G Y
Sbjct: 223 VQFPIRDLDFSEFV---IKPKNESTP-DMYK-------YDLIAVSNHYGGMRDGHYTTFA 271
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 272 CNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 306
>gi|157123971|ref|XP_001653999.1| hypothetical protein AaeL_AAEL009702 [Aedes aegypti]
gi|108874166|gb|EAT38391.1| AAEL009702-PA [Aedes aegypti]
Length = 1214
Score = 64.7 bits (156), Expect = 7e-08, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 22/162 (13%)
Query: 170 PQVNLYTILTKFNNESEKE----YKTYKENFLK---RF-EITSLPPYLILYVKRFTKNTF 221
P V L+ + F + E + Y K N L+ +F + +LP L +++KRF +
Sbjct: 509 PAVTLHDCMAAFFSADELKGDNMYSCEKCNKLRNGVKFSRVLALPEMLCVHLKRFRHDLS 568
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
+ K + VNFP+ +D L + K+ E T YDL A I H G
Sbjct: 569 YSSKISSPVNFPMNGLDMRPYLHKDCKS--------------EVTSYDLGAVICHHGTVG 614
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y H+ GKW+E D VT + P+ + EAY+ Y
Sbjct: 615 GGHYTSFAKHEPTGKWFEFDDQLVTQVSPEDVQNCEAYVLFY 656
>gi|354500406|ref|XP_003512291.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Cricetulus
griseus]
Length = 1060
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ + F EK T+
Sbjct: 757 IKLFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKFSREKLDTL 816
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K K EST D+ K YDL+A H G +G Y
Sbjct: 817 VQFPIRDLDFSEFV---IKPKNESTP-DMYK-------YDLIAVSNHYGGMRDGHYTTFA 865
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 866 CNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 900
>gi|395517798|ref|XP_003763060.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like, partial
[Sarcophilus harrisii]
Length = 265
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 20/172 (11%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ T K + L K+ ++ SLP LI+++KRF+ F EK T+
Sbjct: 84 IELFTTVETLEEENPWYCPTCKRHQLATKKLDLWSLPEALIIHLKRFSYTKFSREKLDTL 143
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
V FP++++DF + I+ P +A D + K YDL+A H G +G Y
Sbjct: 144 VEFPIRDLDFSEFIIKPRTEA-------DPIPCK-----YDLIAVSNHYGGLRDGHYTTF 191
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY----ELRTTPS-PTAMS 335
+K G+W+ D V+ + I AY+ Y ++R +P+ P A S
Sbjct: 192 ARNKDSGQWHYFDDSSVSPVSESQIESKAAYVLFYHRQDKVRRSPTRPGAAS 243
>gi|157824037|ref|NP_001099563.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Rattus
norvegicus]
gi|149018537|gb|EDL77178.1| similar to Ubiquitin carboxyl-terminal hydrolase 4 (Ubiquitin
thiolesterase 4) (Ubiquitin-specific processing protease
4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear
protein), isoform CRA_b [Rattus norvegicus]
Length = 914
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 15/138 (10%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + Y
Sbjct: 761 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRAARPY------ 814
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + ++ GKWY D V+ I
Sbjct: 815 ---------VYDLIAVSNHYGAMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKA 865
Query: 318 AYIQIYELRTTPSPTAMS 335
AY+ Y+ R P+ S
Sbjct: 866 AYVLFYQRRDDECPSTSS 883
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL +YFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 272 CLSNTGPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--THVAPR-MF 328
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 329 KTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLEPKDANGRPDAVVAKEA 388
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD ++E
Sbjct: 389 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRIME 443
>gi|402223712|gb|EJU03776.1| cysteine proteinase [Dacryopinax sp. DJM-731 SS1]
Length = 434
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 136/317 (42%), Gaps = 30/317 (9%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
L F ++++++W NF +++ P ++V ++ F +Q D +F+S+ L+ LH
Sbjct: 120 LAGAFAKMVQEMWQ-ANF-TYLDPTNFRRSVCHYA-PSFAGGDQHDAQEFISFLLDGLHE 176
Query: 92 ALNGTKKKDSS-----------------IVYKTFLGSMKVKTRKIPPVELEEKVRQRLLL 134
LN +K ++ I + + + + + + R +L
Sbjct: 177 DLNRILQKPANDDPTPEHEAELERLPQQIAGEQEWQRYQRRDDSLVVDYFQGQFRNKLEC 236
Query: 135 TEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKE 194
+K + T + F+YL+ +P L+ + I+ K + ++
Sbjct: 237 MTCHKTSTTYNAFMYLSLPIPTGRGMSKVTLQQCMDAFVKEEIMEKGDAWKCPHCMALRK 296
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDI----LTPEVKAK 250
K+ I+ LPP L++++KRF+ FV+K T+V+FP+K++D + L P V
Sbjct: 297 A-TKQLSISRLPPVLLIHLKRFSYKGPFVDKLETLVDFPLKDLDLTNYMPSPLPPGVDKG 355
Query: 251 YESTM---YDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTD 307
+ + D +++ Y+L A H G ++G Y + K G W D +++
Sbjct: 356 FSQSSPIKLDDPRSQIPPYRYELYAVTNHFGSLTSGHYTAFIASK--GSWVYCDDSRLSN 413
Query: 308 ILPQMITLTEAYIQIYE 324
+ I AYI Y+
Sbjct: 414 AEGREIVAKPAYILFYK 430
>gi|432851662|ref|XP_004067022.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Oryzias
latipes]
Length = 1074
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 137/346 (39%), Gaps = 56/346 (16%)
Query: 1 ALCHVTPLRDYF-----LREINYARVKRPPGDSSFLLVQRFGELMRKLW-------NPRN 48
LC+ + +YF L +IN + + G+ + FG +M+ LW +PR+
Sbjct: 759 CLCNTPAMAEYFNSNYYLEDINRSNILGHKGE----FAEEFGVIMKALWAGLYKCISPRD 814
Query: 49 FKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK--------- 99
FK + QF +Q D + L + ++ LH LN K
Sbjct: 815 FK----------ITIGKINDQFAGYDQQDSQELLLFLMDGLHEDLNKADNKKRYKEEEND 864
Query: 100 --DSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPP 157
D K+ I + + + + + ++++ T F+YL+ LP
Sbjct: 865 HLDDQTAADLAWSKHKLLNESIIVALFQGQFKSTVQCSTCHRKSRTFETFMYLS--LPLA 922
Query: 158 PLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFT 217
K L++ + + LT N + K ++++ K+ EI +PP L++++KRF+
Sbjct: 923 STSKCS-LQDCLRLFSKEEKLTDNNKVFCRHCKAHRDS-TKKLEIWKVPPILLVHLKRFS 980
Query: 218 KNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD 277
+ +K T V+FP+ N+D T Y ++ K Y L H
Sbjct: 981 YEGRWKQKLQTTVDFPLDNLDL--------------TQY-VIGPKQTLKRYYLYGVSNHY 1025
Query: 278 GEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G G Y + + +WY+ D V++I + + AYI Y
Sbjct: 1026 GGLDGGHYTAYCKNATKQRWYKFDDHEVSEISTSSVKSSAAYILFY 1071
>gi|338716960|ref|XP_003363554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Equus caballus]
Length = 1011
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 149/366 (40%), Gaps = 77/366 (21%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 687 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 740
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT------------------- 96
+ + + QF Q D + L + ++ LH LN
Sbjct: 741 KD-FKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKA 799
Query: 97 --------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFL 148
K+ + SI+ F G K + LT +K++ T F+
Sbjct: 800 AEHAWQKHKQLNESIIVALFQGQFKSTVQ---------------CLTC-HKKSRTFEAFM 843
Query: 149 YLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPY 208
YL+ LP K L++ + + LT NN + + + LK+ EI LPP
Sbjct: 844 YLS--LPLASTSKC-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPV 899
Query: 209 LILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMY 268
L++++KRF+ + + +K T V+FP++N+D ++Y ++ K Y
Sbjct: 900 LLVHLKRFSYDGRWKQKLQTSVDFPLENLDL---------SQY------VIGPKNNLKKY 944
Query: 269 DLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTT 328
+L + H G G Y + + +W++ D V+DI + + AYI Y T+
Sbjct: 945 NLFSVSNHYGGLDGGHYTAYCKNAARQRWFKFDDHEVSDIAVSSVKSSAAYILFY---TS 1001
Query: 329 PSPTAM 334
P A+
Sbjct: 1002 LGPRAI 1007
>gi|281338350|gb|EFB13934.1| hypothetical protein PANDA_009352 [Ailuropoda melanoleuca]
Length = 962
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + D
Sbjct: 808 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVC------------D 855
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y MYDL+A H G G Y + +K GKWY D V+ I
Sbjct: 856 LSARPY---MYDLIAVSNHYGAMGVGHYTAYAKNKVNGKWYYFDDSSVSLASEDQIVTKA 912
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 913 AYVLFYQRR 921
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ SHV+P M
Sbjct: 317 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--SHVAPR-MF 373
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 374 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 433
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 434 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 488
>gi|301770377|ref|XP_002920614.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Ailuropoda
melanoleuca]
Length = 1000
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + D
Sbjct: 846 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVC------------D 893
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y MYDL+A H G G Y + +K GKWY D V+ I
Sbjct: 894 LSARPY---MYDLIAVSNHYGAMGVGHYTAYAKNKVNGKWYYFDDSSVSLASEDQIVTKA 950
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 951 AYVLFYQRR 959
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ SHV+P M
Sbjct: 355 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--SHVAPR-MF 411
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 412 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 471
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 472 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 526
>gi|195058982|ref|XP_001995537.1| GH17708 [Drosophila grimshawi]
gi|193896323|gb|EDV95189.1| GH17708 [Drosophila grimshawi]
Length = 847
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 134/350 (38%), Gaps = 68/350 (19%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L H T L FLR N + D L F +L++++W N S V+P E+ +
Sbjct: 538 CLSHTTEL-TRFLRGHNASPRSATSKDQQIL--HEFAKLIQEMWTT-NVHS-VTPMELKR 592
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALN---------------GTKKKD----- 100
A L R + +Q D +FL +FL++LH ALN KK D
Sbjct: 593 AFSLKHRMYNDYNQQ-DAQEFLRFFLDSLHSALNTGVKGETLNIDDNLSDNKKADLTWEW 651
Query: 101 -----SSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLP 155
+S++ F+G +K L T + T PF L+ LP
Sbjct: 652 YARHENSLIRDLFVGQLK----------------STLKCTTCGNTSVTFDPFWDLSVPLP 695
Query: 156 PPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKR 215
K LE+ + +L + + KT ++ K F I P YL++++KR
Sbjct: 696 SSSRCK---LESCLDLFIREEVLDGDEMPTCSKCKTRRK-CTKSFTIQRFPKYLVIHLKR 751
Query: 216 FTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIV 275
F++ + K IV FP A E M + Y L A
Sbjct: 752 FSETRW--SKLSNIVEFPT--------------ADRELNMASYGANANSNVHYSLYAISN 795
Query: 276 HDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQ-MITLTEAYIQIYE 324
H G + G Y H KW+E D V+D +P+ + + AYI YE
Sbjct: 796 HMGSTAGGHYVAICKHPVSHKWHEFNDNSVSDSIPENCLVSSSAYILFYE 845
>gi|202070754|ref|NP_001128484.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Rattus
norvegicus]
gi|302595968|sp|B2GUZ1.1|UBP4_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|149018536|gb|EDL77177.1| similar to Ubiquitin carboxyl-terminal hydrolase 4 (Ubiquitin
thiolesterase 4) (Ubiquitin-specific processing protease
4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear
protein), isoform CRA_a [Rattus norvegicus]
gi|183985839|gb|AAI66460.1| Usp4 protein [Rattus norvegicus]
Length = 961
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 15/138 (10%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + Y
Sbjct: 808 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRAARPY------ 861
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + ++ GKWY D V+ I
Sbjct: 862 ---------VYDLIAVSNHYGAMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKA 912
Query: 318 AYIQIYELRTTPSPTAMS 335
AY+ Y+ R P+ S
Sbjct: 913 AYVLFYQRRDDECPSTSS 930
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL +YFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTGPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--THVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLEPKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD ++E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRIME 490
>gi|338714892|ref|XP_003363165.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Equus caballus]
Length = 916
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + D
Sbjct: 762 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVC------------D 809
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y +YDL+A H G G Y + +K GKWY D +V+ + I
Sbjct: 810 LSARPY---VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEEQIVTKA 866
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 867 AYVLFYQRR 875
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 272 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 328
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 329 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 388
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 389 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 443
>gi|194221320|ref|XP_001498012.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Equus
caballus]
Length = 963
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + D
Sbjct: 809 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVC------------D 856
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y +YDL+A H G G Y + +K GKWY D +V+ + I
Sbjct: 857 LSARPY---VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEEQIVTKA 913
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 914 AYVLFYQRR 922
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 490
>gi|395546304|ref|XP_003775029.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like
[Sarcophilus harrisii]
Length = 935
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ T K + L K+ ++ +LP LI+++KRF+ F EK T+
Sbjct: 754 IELFTTVETLEEENPWYCPTCKRHQLATKKLDLGALPEALIIHLKRFSYTKFSREKLDTL 813
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
V FP++++DF + I+ P +A D K YDL+A H G +G Y
Sbjct: 814 VEFPIRDLDFSEFIIKPRTEA-------DPTPCK-----YDLIAVSNHYGGLRDGHYTTF 861
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE----LRTTPS-PTAMS 335
+K G+W+ D V+ + I AY+ Y+ +R +P+ P A S
Sbjct: 862 ARNKDSGQWHYFDDSSVSPVSESQIESKAAYVLFYQRQDKVRRSPTRPGAAS 913
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 26/112 (23%)
Query: 1 ALCHVTPLRDYFL-----REINYARVKRPPGDSSFLLVQRFGELMRKLWN-------PRN 48
L +V PL +YFL +E+N+ G+ + + + +L+++ W+ PR
Sbjct: 234 CLSNVPPLTEYFLHNHYLKELNFCNPLGMKGE----IAEAYADLVKQAWSGHHRSVVPRM 289
Query: 49 FKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD 100
FK+ V QF +Q D + LS+ L+ LH LN KKK+
Sbjct: 290 FKTKVGHFA----------SQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKE 331
>gi|115497674|ref|NP_001069594.1| ubiquitin carboxyl-terminal hydrolase 8 [Bos taurus]
gi|113911783|gb|AAI22572.1| Ubiquitin specific peptidase 8 [Bos taurus]
gi|296483106|tpg|DAA25221.1| TPA: ubiquitin specific peptidase 8 [Bos taurus]
Length = 1085
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 142/356 (39%), Gaps = 76/356 (21%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 761 CLCNTPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 814
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT------------------- 96
+ + + QF Q D + L + ++ LH LN
Sbjct: 815 KD-FKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKA 873
Query: 97 --------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFL 148
K+ + SI+ F G K + + +K++ T F+
Sbjct: 874 AEHAWQKHKQLNESIIVALFQGQFKSTVQCLTC----------------HKKSRTFEAFM 917
Query: 149 YLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPY 208
YL+ LP K L++ + + LT NN + + + LK+ EI LPP
Sbjct: 918 YLS--LPLASTSKC-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPV 973
Query: 209 LILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTM 267
L++++KRF+ + + +K T V+FP++N+D ++ P+ K
Sbjct: 974 LLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLK----------------K 1017
Query: 268 YDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
Y+L + H G G Y + + +W++ D V+DI + + AYI Y
Sbjct: 1018 YNLFSVSNHYGGLDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFY 1073
>gi|195426425|ref|XP_002061335.1| GK20778 [Drosophila willistoni]
gi|194157420|gb|EDW72321.1| GK20778 [Drosophila willistoni]
Length = 917
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 170 PQVNLYTILTKFNNESE----KEYKTYKENFL----KRFEITSLPPYLILYVKRFTKNTF 221
P V LY + F + E Y K N L K + +LP L +++KRF +
Sbjct: 361 PSVTLYDCMASFFSADELKGDNMYSCEKCNKLRTGIKYSRVLNLPEVLCIHLKRFRHDLS 420
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
+ K + V FP++ D + P V +S +Y Y+L + I H G
Sbjct: 421 YSSKISSHVYFPLEGFD----MHPYVDKNCQSQVYS----------YNLSSVICHHGTVG 466
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
G Y + + G+WYE D VT++LP+++ +AY+ Y+
Sbjct: 467 GGHYTCYARNSLNGRWYEFDDQFVTEVLPEVVQNCQAYVLFYQ 509
>gi|4689128|gb|AAD27773.1|AF077040_1 SIH003 [Homo sapiens]
Length = 317
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 120/298 (40%), Gaps = 45/298 (15%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 40 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 95
Query: 82 LSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRKIPPVELEEKVRQ 130
+ + L+ LH L G S S K + I L+ +V
Sbjct: 96 MRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNC 155
Query: 131 RLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEY 189
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 156 LICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDET 211
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 212 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 271
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWY 298
+L PE ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 272 LLEPENSGP-------------ESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWF 314
>gi|12854228|dbj|BAB29966.1| unnamed protein product [Mus musculus]
Length = 390
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 130/336 (38%), Gaps = 44/336 (13%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
LC V+PL +YFL +K+ + + F LM +W VSP L
Sbjct: 62 CLCSVSPLVEYFLSGKYITALKKDCSE----VTTAFAYLMTDMW--LGDSDCVSPEIFLS 115
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV + T+Q D +FL + LN LH AL KK V + G + RK+P
Sbjct: 116 AVGSLYPAFLKKTQQ-DAQEFLIYVLNELHEAL---KKHCRRRVNEKRTG--QSCCRKVP 169
Query: 121 PVELEEKVRQRLL-------LTEEYKETETESPFLYLTCDLPPPPLFK---DEVLENIIP 170
E+ + RL +T E+ T ++ LP P ++ + L+
Sbjct: 170 AQEIS--IITRLFEGQLSYSITCLKCESCTHKNEVFTILSLPIPSDYECSLQDCLQCFFQ 227
Query: 171 QVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIV 230
Q L ++N+ + K+ R I+ +P ++ + KRF K T +
Sbjct: 228 QDTL-----TWSNQIYCSFCEIKQEAAVRTTISKVPKIIVFHFKRFDIQGTVKRKLRTDI 282
Query: 231 NFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLY 290
++P+ N+D + P + + MY+L A + H G+ G Y
Sbjct: 283 HYPLTNLDLTPYICPVFR---------------KHPMYNLCAVVNHFGDLDGGHYTAFCK 327
Query: 291 HKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
+ WY D V++I + AY+ Y +
Sbjct: 328 NSVTQAWYSFDDTRVSEIPDTSVQTATAYLLFYSCQ 363
>gi|76443681|ref|NP_001008861.2| ubiquitin carboxyl-terminal hydrolase 11 [Rattus norvegicus]
gi|60422774|gb|AAH90333.1| Ubiquitin specific peptidase 11 [Rattus norvegicus]
gi|149044387|gb|EDL97708.1| ubiquitin specific protease 11 [Rattus norvegicus]
Length = 921
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 16/170 (9%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ + F EK T+
Sbjct: 744 IKLFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKFSREKLDTL 803
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K K ES DL K YDL+A H G +G Y
Sbjct: 804 VQFPIRDLDFSEFV---IKPKNESAP-DLYK-------YDLIAVSNHYGGMRDGHYTTFA 852
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTP---SPTAMSE 336
+K G+W+ D V+ + I AY+ Y+ + S TA SE
Sbjct: 853 CNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQDVGRRQSQTASSE 902
>gi|393222219|gb|EJD07703.1| UCH-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 1210
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTP-EVKAKYESTMY 256
K+F++ ++P L++++KRF+ + +K V+FPV+ +D EV + +
Sbjct: 898 KKFDLWTIPDILVVHLKRFSNSRILRDKIDAFVDFPVEGLDLEAFSGEREVAKRLAQEGH 957
Query: 257 DL----VKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQM 312
D+ V E +YDL A H G G YR + + KWY D HV+ P
Sbjct: 958 DVKALGVSDAEEPLLYDLYAVDEHMGGLGGGHYRAYAKNHETDKWYHFDDTHVSVADPAD 1017
Query: 313 ITLTEAYIQIYELRTTPSPTAMS 335
AY+ Y+ RT+ + +S
Sbjct: 1018 AVNRSAYLLFYKRRTSRAIGGVS 1040
>gi|426233322|ref|XP_004010666.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Ovis
aries]
Length = 1086
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 142/356 (39%), Gaps = 76/356 (21%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 762 CLCNTPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 815
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT------------------- 96
+ + + QF Q D + L + ++ LH LN
Sbjct: 816 KD-FKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKA 874
Query: 97 --------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFL 148
K+ + SI+ F G K + + +K++ T F+
Sbjct: 875 AEHAWQKHKQLNESIIVALFQGQFKSTVQCLTC----------------HKKSRTFEAFM 918
Query: 149 YLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPY 208
YL+ LP K L++ + + LT NN + + + LK+ EI LPP
Sbjct: 919 YLS--LPLASTSKC-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPV 974
Query: 209 LILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTM 267
L++++KRF+ + + +K T V+FP++N+D ++ P+ K
Sbjct: 975 LLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLK----------------K 1018
Query: 268 YDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
Y+L + H G G Y + + +W++ D V+DI + + AYI Y
Sbjct: 1019 YNLFSVSNHYGGLDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFY 1074
>gi|344258660|gb|EGW14764.1| Ubiquitin carboxyl-terminal hydrolase 11 [Cricetulus griseus]
Length = 447
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ + F EK T+
Sbjct: 270 IKLFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKFSREKLDTL 329
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K K EST D+ K YDL+A H G +G Y
Sbjct: 330 VQFPIRDLDFSEFV---IKPKNESTP-DMYK-------YDLIAVSNHYGGMRDGHYTTFA 378
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 379 CNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 413
>gi|403215501|emb|CCK70000.1| hypothetical protein KNAG_0D02510 [Kazachstania naganishii CBS
8797]
Length = 419
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 130/335 (38%), Gaps = 92/335 (27%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L H+TP+RD N K+ G LV + + +++LW+ + HVSP E +
Sbjct: 161 LAHITPVRD------NLLLCKQQEG----TLVGQVTQFVQRLWSTTLLRGHVSPEEWVSY 210
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
+ + SR T DP +W +N L ++
Sbjct: 211 LQVHSRDWLDVT---DPKLAFNWLINQLIKS----------------------------- 238
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLP--PPPLFKDEVLENIIPQVNLYTIL- 178
L++ + E K+T PF +T DLP +FKD N +PQ+ L T+L
Sbjct: 239 -PLQDTLASACRGEIEVKQTSRVVPFWNVTLDLPTSSATIFKDGREVNDLPQIQLSTLLQ 297
Query: 179 TKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTF---FVEKNPTIVNFPVK 235
KF++++ + SLP +LI+Y R + ++N T+V+FP
Sbjct: 298 NKFDSDTAP------------YMFRSLPEHLIVYYNRHSGARLPFPVRDRNQTMVDFP-- 343
Query: 236 NVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD-------GEPSNGTYRVH 288
LT E + Y L N+++D +++
Sbjct: 344 -------LTVEFPGNHR---------------YRLQGNLINDVVRSSDIATDDTNHWKLQ 381
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
L + +WYEI VT +++ L E Y+Q++
Sbjct: 382 LLNTNNDQWYEIDGPLVTAREQELLFLKETYLQVW 416
>gi|336381480|gb|EGO22632.1| hypothetical protein SERLADRAFT_372069 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1030
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 123/304 (40%), Gaps = 43/304 (14%)
Query: 52 HVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGS 111
H++P+ +++ + QF +EQ D +FLS+ L+ LH LN +K V
Sbjct: 735 HLTPNAFRRSICSHA-PQFSGSEQHDSQEFLSFLLDGLHEDLNRVLQKPHYEVTPEREAE 793
Query: 112 MKVKTRKIPPVE----------------LEEKVRQRLLLTEEYKETETESPFLYLTCDLP 155
++ ++I + + + R R+ +K + T + F+YLT
Sbjct: 794 LEKLPQQIASQQEWNLYRMRNDSLVVDYFQGQFRNRMECLTCHKTSTTYNTFMYLTL--- 850
Query: 156 PPPLFKDEVLENIIPQVNLYTILTKFNNES--EKEYKTYKENF------LKRFEITSLPP 207
P P+ + +V+L + L F E E + N KR ++ LPP
Sbjct: 851 PIPIVRGSS------KVSLQSCLDAFVKEEILENTDAWHCPNCKALRKATKRLSLSRLPP 904
Query: 208 YLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTM 267
L++++KRF+ F +K T+V+FP++ +D + + P + + + E
Sbjct: 905 ILLIHLKRFSFKGPFTDKIETVVDFPLRTLDLTNYMPPPLPPGMDKGNMNGANLSTEDPR 964
Query: 268 -------YDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYI 320
YDL H G S G Y + + G W D VT + + AY+
Sbjct: 965 MQTPPYKYDLYGVTNHFGTLSGGHYTAFIASR--GGWVYCDDSRVTPTDAKQVVGRPAYV 1022
Query: 321 QIYE 324
Y+
Sbjct: 1023 LYYK 1026
>gi|260836461|ref|XP_002613224.1| hypothetical protein BRAFLDRAFT_210578 [Branchiostoma floridae]
gi|229298609|gb|EEN69233.1| hypothetical protein BRAFLDRAFT_210578 [Branchiostoma floridae]
Length = 346
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 131/362 (36%), Gaps = 79/362 (21%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L H L DY + E +K L++ F L+R++W R VSP +
Sbjct: 23 CLSHTKQLADYCMNENYIFDLKDSNSSMKGALMKAFANLIRQMW--RGSSDAVSP-SAFK 79
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK--------------------- 99
A + +F Q D +FL + L LH +N + K
Sbjct: 80 AQIQKFAPRFVGYNQQDSQEFLRFLLEGLHDDINKVQVKPKPSYSDDEEIEKLSDERKAR 139
Query: 100 ---------DSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYL 150
D+S + F+G +K L T + T PF L
Sbjct: 140 HAWNKYLLRDNSQITDLFVGQLK----------------SVLQCTHCQHCSVTFDPFWDL 183
Query: 151 TCDLPPPP------LFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITS 204
+ +P +D V E I+ T ++ + K K FL+R
Sbjct: 184 SLPIPKKSSIDVRDCLRDFVEEEILDGDEKPTC-----SKCKARRKCTKRFFLQR----- 233
Query: 205 LPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYE 264
LP L+L++KRF+ + +K T VNFP+ ++ + PE + +T
Sbjct: 234 LPKILVLHLKRFS-GMRYRQKLSTTVNFPLAKLNLQEFTCPESRGSAPAT---------- 282
Query: 265 STMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
YDL A H G G Y + + G W+ D V+ I + +EAY+ YE
Sbjct: 283 ---YDLYAVSNHSGTTFGGHYTAYCKYPTTGDWHCFNDSRVSSISASSVISSEAYVLFYE 339
Query: 325 LR 326
LR
Sbjct: 340 LR 341
>gi|449489446|ref|XP_002194208.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Taeniopygia
guttata]
Length = 625
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 135/351 (38%), Gaps = 66/351 (18%)
Query: 8 LRDY-----FLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAV 62
LRDY +LR++N R L+ F +L++ LW +S VSP E +
Sbjct: 311 LRDYCLQNQYLRDLNNNSRMR------TALMSEFAKLIQLLWTSSPNES-VSPSEFKTQI 363
Query: 63 VLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPV 122
++ + + +Q D +FL + L+ LH +N L + T + +
Sbjct: 364 QRYAPRFVGYNQQ-DAQEFLRFLLDGLHSEVN------------RVLVRPRASTDSLDHL 410
Query: 123 ELEEKVRQRLLLTEEYKETETESPFL-----YLTCD----------------LPPPPLFK 161
+EK RQ +E +++ F+ LTC LP P
Sbjct: 411 PDDEKSRQMWRRYQEREDSRISDLFVGQLKSSLTCSECGYCSTAFDPFWDLSLPIPKKGY 470
Query: 162 DEVLENIIPQVNLYTILTKFNNESEKEYKTYKEN--FLKRFEITSLPPYLILYVKRFTKN 219
EV ++ + L+T + + + K K+F I P L+L++KRF++
Sbjct: 471 GEV--TLMDCLRLFTKEDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLHLKRFSEA 528
Query: 220 TFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGE 279
K T VNFP+K++D + + +Y+L A H G
Sbjct: 529 RIRSSKLTTFVNFPLKDLD----------------LREFASQSCNHAVYNLYAVSNHSGT 572
Query: 280 PSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G Y + +W+ D VT + + ++AY+ YEL + S
Sbjct: 573 TMGGHYTAYCKSPVSSEWHSFNDSRVTPMSSSHVRSSDAYLLFYELASPSS 623
>gi|334350493|ref|XP_001371319.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like
[Monodelphis domestica]
Length = 993
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ T K + L K+ ++ +LP LI+++KRF+ F EK T+
Sbjct: 812 IELFTTVETLEEENPWYCPTCKRHQLATKKLDLWALPEALIIHLKRFSYTKFSREKLDTL 871
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + L +K + E+ D K YDL+A H G +G Y
Sbjct: 872 VEFPIRDLDFSEFL---IKPRSEA---DPAPCK-----YDLIAVSNHYGGLRDGHYTTFA 920
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 921 RNKDSGQWHYFDDSSVSPVSESQIESKAAYVLFYQ 955
>gi|351699503|gb|EHB02422.1| Ubiquitin carboxyl-terminal hydrolase 11, partial [Heterocephalus
glaber]
Length = 911
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ + F EK T+
Sbjct: 734 IELFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEILIIHLKRFSFSKFSHEKLDTL 793
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V+FP++++DF D + +K + ES E YDL+A H G +G Y
Sbjct: 794 VHFPIRDLDFSDFV---IKPQNESAP--------ELYKYDLIAVSNHYGGIRDGHYTTFA 842
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTT 328
+K G+W+ D V+ + I AY+ Y+ + T
Sbjct: 843 CNKDSGQWHYFDDSSVSPVNENQIESKAAYVLFYQRQDT 881
>gi|348517076|ref|XP_003446061.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like
[Oreochromis niloticus]
Length = 1009
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+ ++ SLP LI+++KRF+ F EK +IV FP++++DF L +
Sbjct: 841 KKLDLWSLPEVLIIHLKRFSYTKFTREKLDSIVEFPLRDLDFSGFL-----------LRK 889
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+ ++ + YDL+A H G +G Y + +K G+WY D VT I +
Sbjct: 890 TLSSEEPPSRYDLIAVSNHYGGLRDGHYTTYAKNKDNGQWYYFDDSKVTYATEDQIVTSA 949
Query: 318 AYIQIYE 324
AY+ Y+
Sbjct: 950 AYVLFYQ 956
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 28/183 (15%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
L + PL +YFL+ E+N+ G+ + + + ++++++W+ R++ V P
Sbjct: 260 CLSNTPPLTEYFLQNSYVDELNFTNPLGMKGE----IAEAYADVIKQMWSGRHYS--VVP 313
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK------------DSSI 103
+ + V QF +Q D + LS+ L+ LH LN K K D +
Sbjct: 314 R-VFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKNKEYIELRDADGRQDQEV 372
Query: 104 VYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDE 163
+ + ++ I + L+ E +K + T PF YL+ P P+ K+
Sbjct: 373 AEEAWRNHLRRNDSVIVDT-FHGLFKSTLVCPECHKVSVTFDPFCYLSV---PLPVSKER 428
Query: 164 VLE 166
V+E
Sbjct: 429 VME 431
>gi|349604082|gb|AEP99732.1| Ubiquitin carboxyl-terminal hydrolase 4-like protein, partial
[Equus caballus]
Length = 431
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + D
Sbjct: 277 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVC------------D 324
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y +YDL+A H G G Y + +K GKWY D +V+ + I
Sbjct: 325 LSARPY---VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEEQIVTKA 381
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 382 AYVLFYQRR 390
>gi|223029565|gb|ACM78504.1| MIP03335p [Drosophila melanogaster]
Length = 367
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 135/299 (45%), Gaps = 29/299 (9%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
+++ L+++LWN + +K S L+ VV +K F+ +Q D +FL+ ++ LH
Sbjct: 81 VIEEVAALIKELWNGQ-YKCVAS--RDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHS 137
Query: 92 ALNG----TKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPF 147
L +++ S K +L K K I + +++ + +KE+ T F
Sbjct: 138 DLQTLHVPRQREMISASEKAWLEFTKAKESMILHL-FYGQMKSTVKCVACHKESATYESF 196
Query: 148 LYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPP 207
L+ +LPP + + + +++Y + + + KT K + +K+ +I+ LPP
Sbjct: 197 SNLSLELPP-----NSNVCQLNQCMDMYFSGERIHGWNCPSCKT-KRDAIKKLDISKLPP 250
Query: 208 YLILYVKRF---TKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYE 264
L++++KRF N+ K + FP++N+D + P + A+ ES +A
Sbjct: 251 VLVVHLKRFYADPSNSGLYMKKQNYLRFPLENLD----MNPYI-ARAES------RAVTP 299
Query: 265 STMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
T Y L A H G G Y GKW++ D V+ + + + AYI Y
Sbjct: 300 KT-YQLYAVSNHYGTMEGGHYTAFCKSANYGKWFKFDDQVVSALDSSNVVSSAAYILFY 357
>gi|114205510|gb|AAI05614.1| Usp11 protein [Rattus norvegicus]
Length = 728
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 16/170 (9%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ + F EK T+
Sbjct: 551 IKLFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKFSREKLDTL 610
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K K ES DL K YDL+A H G +G Y
Sbjct: 611 VQFPIRDLDFSEFV---IKPKNESAP-DLYK-------YDLIAVSNHYGGMRDGHYTTFA 659
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTP---SPTAMSE 336
+K G+W+ D V+ + I AY+ Y+ + S TA SE
Sbjct: 660 CNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQDVGRRQSQTASSE 709
>gi|426233324|ref|XP_004010667.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Ovis
aries]
Length = 1009
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 143/356 (40%), Gaps = 76/356 (21%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 685 CLCNTPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 738
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT------------------- 96
+ + + QF Q D + L + ++ LH LN
Sbjct: 739 KD-FKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKA 797
Query: 97 --------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFL 148
K+ + SI+ F G K + LT +K++ T F+
Sbjct: 798 AEHAWQKHKQLNESIIVALFQGQFKSTVQ---------------CLTC-HKKSRTFEAFM 841
Query: 149 YLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPY 208
YL+ LP K L++ + + LT NN + + + LK+ EI LPP
Sbjct: 842 YLS--LPLASTSKC-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPV 897
Query: 209 LILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTM 267
L++++KRF+ + + +K T V+FP++N+D ++ P+ K
Sbjct: 898 LLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLK----------------K 941
Query: 268 YDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
Y+L + H G G Y + + +W++ D V+DI + + AYI Y
Sbjct: 942 YNLFSVSNHYGGLDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFY 997
>gi|444510625|gb|ELV09647.1| Ubiquitin carboxyl-terminal hydrolase 4 [Tupaia chinensis]
Length = 898
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + D
Sbjct: 746 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRALNMSEFVC------------D 793
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y +YDL+A H G G Y + +K G+WY D +V+ I
Sbjct: 794 LSARPY---VYDLIAVSNHYGAMGVGHYTAYAKNKLNGRWYYFDDSNVSLASEDQIVTKA 850
Query: 318 AYIQIYELRTTPSPT 332
AY+ Y+ R +P+
Sbjct: 851 AYVLFYQRRDEETPS 865
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL+R++W+ R ++HV+P M
Sbjct: 250 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIRQMWSGR--EAHVAPR-MF 306
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK 99
+ V QF +Q D + L++ L+ LH LN KKK
Sbjct: 307 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKK 346
>gi|327276737|ref|XP_003223124.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like isoform 2
[Anolis carolinensis]
Length = 890
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF + F K T V+FP++ +D L + A+
Sbjct: 547 NGVKFCKVQHFPEILCIHLKRFRHDLMFSTKIGTHVSFPLEGLDLQPFLAKDSPAQI--- 603
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
MYDL++ I H G NG Y + ++ +WYE D VT++ +
Sbjct: 604 -----------VMYDLLSVICHHGTAINGHYIAYCWNNLNNRWYEFDDQSVTEVTESTVQ 652
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 653 NAEAYVLFY 661
>gi|296225191|ref|XP_002758385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Callithrix jacchus]
Length = 963
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKR-PPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTDYFLKDEYEAEINRINPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK S+V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ K++ + + L+ E +K + T PF YLT P PL KD V+E
Sbjct: 436 WENHKLRNDSVIVDTFHGLFKSTLVCPECFKVSVTFDPFCYLTL---PLPLKKDRVME 490
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + + Y
Sbjct: 810 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNQSARPY------ 863
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 864 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 914
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 915 AYVLFYQRR 923
>gi|426249551|ref|XP_004018513.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Ovis
aries]
Length = 916
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + Y
Sbjct: 763 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDPSARPY------ 816
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 817 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLACEDQIVTKA 867
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 868 AYVLFYQRR 876
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 272 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 328
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 329 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 388
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 389 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 443
>gi|330822614|ref|XP_003291744.1| hypothetical protein DICPUDRAFT_50006 [Dictyostelium purpureum]
gi|325078064|gb|EGC31737.1| hypothetical protein DICPUDRAFT_50006 [Dictyostelium purpureum]
Length = 984
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 39/208 (18%)
Query: 144 ESPFLYLTCDLPPPPLFKDEVLENIIP-QVNLYTILTKFNNESE---------KEYKTYK 193
E P LYL + P L K+ + ++ P V+L + F E + K ++
Sbjct: 731 EDPSLYLEYEKLSPDLTKNGGVRDVSPYNVDLEQCIDLFTTEEQLGPEDPWYCSNCKKHQ 790
Query: 194 ENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYES 253
F K+F+I S PP L++++KRF+ + +K T+V FP+K++D +KY
Sbjct: 791 RAF-KKFDIWSAPPILVVHLKRFSYKKHYRDKLDTLVKFPIKDLDL---------SKY-- 838
Query: 254 TMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHK-------------GIGKWYEI 300
++ +YDL A H G G Y + ++ G GKWY+
Sbjct: 839 ----VLSKNQPPPIYDLFAVSNHYGSLGGGHYTAYALNEPETKEAKANGNSNGNGKWYKF 894
Query: 301 QDLHVTDILPQMITLTEAYIQIYELRTT 328
D HV++ + + AY+ Y + T
Sbjct: 895 DDSHVSEANVENVESEAAYVLFYRRKDT 922
>gi|449691049|ref|XP_004212543.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like, partial
[Hydra magnipapillata]
Length = 114
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 12/113 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K + SLP L +++KRF F+ K T ++FP+K++D L+ +
Sbjct: 14 NGIKYSRVNSLPEVLCIHLKRFRHELFYSSKISTYISFPLKDLDMEMFLSKD-------- 65
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTD 307
+ + YDL A I H G G Y H + GKWYE D HVT+
Sbjct: 66 ----CQKSSSCSKYDLTAVITHFGSVGGGHYIAHAKNYVNGKWYEFNDSHVTE 114
>gi|326933314|ref|XP_003212751.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Meleagris
gallopavo]
Length = 549
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 135/358 (37%), Gaps = 66/358 (18%)
Query: 1 ALCHVTPLRDY-----FLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
L + LRDY +LR++N R L+ F +L++ LW S VSP
Sbjct: 228 CLSNTKELRDYCLQNQYLRDLNNNSRMRTA------LMSEFAKLIQLLWTSSPNDS-VSP 280
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVK 115
E + ++ + + +Q D +FL + L+ LH +N L +
Sbjct: 281 SEFKTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHSEVN------------RVLVRPRAN 327
Query: 116 TRKIPPVELEEKVRQRLLLTEEYKETETESPFL-----YLTCD----------------L 154
+ + +EK RQ +E +++ F+ LTC L
Sbjct: 328 ADTLDHLPDDEKSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDPFWDLSL 387
Query: 155 PPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKEN--FLKRFEITSLPPYLILY 212
P P EV ++ + L+T + + + K K+F I P L+L+
Sbjct: 388 PIPKKGYGEV--TLMDCLRLFTKEDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLH 445
Query: 213 VKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVA 272
+KRF++ K T VNFP+K++D + + +Y+L A
Sbjct: 446 LKRFSEARIRASKLSTFVNFPLKDLD----------------LREFASQSCNHAVYNLYA 489
Query: 273 NIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
H G G Y + +W+ D VT + + ++AY+ YEL + S
Sbjct: 490 VSNHSGTTMGGHYTAYCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLFYELASPSS 547
>gi|327276735|ref|XP_003223123.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like isoform 1
[Anolis carolinensis]
Length = 897
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF + F K T V+FP++ +D L + A+
Sbjct: 554 NGVKFCKVQHFPEILCIHLKRFRHDLMFSTKIGTHVSFPLEGLDLQPFLAKDSPAQI--- 610
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
MYDL++ I H G NG Y + ++ +WYE D VT++ +
Sbjct: 611 -----------VMYDLLSVICHHGTAINGHYIAYCWNNLNNRWYEFDDQSVTEVTESTVQ 659
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 660 NAEAYVLFY 668
>gi|427778559|gb|JAA54731.1| Putative ubiquitin specific peptidase 2 [Rhipicephalus pulchellus]
Length = 494
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 17/138 (12%)
Query: 193 KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYE 252
++ K F I P L+L++KRF+ + F K T V FP+ N+D L P + +
Sbjct: 372 RQKCTKSFTIHRCPKILVLHLKRFSPSERFRAKLNTRVEFPLTNLD----LCPYMSNSHY 427
Query: 253 STMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQM 312
MY+L A H G +G Y H G+W+E D V+++
Sbjct: 428 -------------VMYNLYAVSNHSGSTYSGHYTATCLHPKSGEWHECNDTKVSEVSASR 474
Query: 313 ITLTEAYIQIYELRTTPS 330
+ +EAY+ YE T S
Sbjct: 475 VVSSEAYVLFYEAATQSS 492
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L H PL +Y L++ + + L + F LM+ +W N + +SP
Sbjct: 77 CLAHTRPLLEYCLKDGYVSEINTSTSSMKGALFEAFATLMKSIWRSSNGEYAISPQAFRS 136
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALN 94
+ ++ + +++Q D +FL + L LH +N
Sbjct: 137 QIQKFAPRFMGYSQQ-DSQEFLHYLLQGLHEDIN 169
>gi|336363428|gb|EGN91818.1| hypothetical protein SERLA73DRAFT_66796 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1114
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 124/306 (40%), Gaps = 45/306 (14%)
Query: 52 HVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGS 111
H++P+ +++ + QF +EQ D +FLS+ L+ LH LN +K V
Sbjct: 817 HLTPNAFRRSICSHA-PQFSGSEQHDSQEFLSFLLDGLHEDLNRVLQKPHYEVTPEREAE 875
Query: 112 MKVKTRKIPPVE----------------LEEKVRQRLLLTEEYKETETESPFLYLTCDLP 155
++ ++I + + + R R+ +K + T + F+YLT
Sbjct: 876 LEKLPQQIASQQEWNLYRMRNDSLVVDYFQGQFRNRMECLTCHKTSTTYNTFMYLTL--- 932
Query: 156 PPPLFKDEVLENIIPQVNLYTILTKFNNE----SEKEYKTYKENF------LKRFEITSL 205
P P+ + +V+L + L F E + + + N KR ++ L
Sbjct: 933 PIPIVRGSS------KVSLQSCLDAFVKEEILENTDAWYVHCPNCKALRKATKRLSLSRL 986
Query: 206 PPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYES 265
PP L++++KRF+ F +K T+V+FP++ +D + + P + + + E
Sbjct: 987 PPILLIHLKRFSFKGPFTDKIETVVDFPLRTLDLTNYMPPPLPPGMDKGNMNGANLSTED 1046
Query: 266 TM-------YDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEA 318
YDL H G S G Y + + G W D VT + + A
Sbjct: 1047 PRMQTPPYKYDLYGVTNHFGTLSGGHYTAFIASR--GGWVYCDDSRVTPTDAKQVVGRPA 1104
Query: 319 YIQIYE 324
Y+ Y+
Sbjct: 1105 YVLYYK 1110
>gi|388581444|gb|EIM21752.1| cysteine proteinase, partial [Wallemia sebi CBS 633.66]
Length = 454
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 20/272 (7%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
L + F +++ +W R + +SP + + ++ QF T+Q D +FLS+ L+ LH
Sbjct: 188 LAESFSQILTHMW--REQYTFISPMTFRKNICTFA-NQFIGTDQHDAQEFLSFLLDGLHE 244
Query: 92 AL---NGTK-----KKDSSIVYKTFLGSMKVKTR------KIPPVELEEKVRQRLLLTEE 137
L G K D+ T LGS + R + + + R R+
Sbjct: 245 DLMVGEGQKPTEDTNNDALESLPTPLGSEREWKRYKQMNDSVIVDYFQGQFRNRMECMSC 304
Query: 138 YKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFL 197
+K + T + F+YL+ +P L L + ++ K N + K +++ +
Sbjct: 305 HKTSTTYNSFMYLSLPVPTKKLKGSVSLTTCLDSFLKDEVMEKDNAWNCPNCKVARKS-I 363
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYES-TMY 256
KR I LPP L++ +KRF+ N F +K T+V +P+KN + TP + +Y T
Sbjct: 364 KRLSIARLPPILLIQLKRFSFNGPFSDKIETLVTYPLKNFNLTP-YTPHMANQYYGITNK 422
Query: 257 DLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
D ++ +Y+L H G +G Y +
Sbjct: 423 DDPTLQHPPFIYELYGVTNHYGSLQSGHYTAN 454
>gi|432959676|ref|XP_004086360.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like [Oryzias
latipes]
Length = 1014
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 24/206 (11%)
Query: 138 YKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFL 197
Y E E E + + ++P + + + + L+T + E+ K++ L
Sbjct: 793 YNENEAEKYVKHSSMEVP-----QQQATVQLQECIELFTTVETLEEENPWYCPVCKKHQL 847
Query: 198 --KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTM 255
K+ ++ SLP LI+++KRF+ F EK +IV+FP++++DF D L +
Sbjct: 848 ATKKLDLWSLPEVLIIHLKRFSYTKFTREKLDSIVDFPLRDLDFSDFL-----------L 896
Query: 256 YDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITL 315
+ ++ + YDL+A H G +G Y + +K +WY D VT I
Sbjct: 897 RKSLSSEEPPSRYDLIAVSNHYGGLRDGHYTSYAKNKDNAQWYYFDDSKVTYASEDQIMT 956
Query: 316 TEAYIQIYELR------TTPSPTAMS 335
AY+ Y + PSP S
Sbjct: 957 NAAYVLFYHRQDKIRKPALPSPLTNS 982
Score = 38.1 bits (87), Expect = 5.3, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 2 LCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPH 56
L + PL +YFL+ E+N+ G+ + + + ++++++W+ R++ V P
Sbjct: 261 LSNTPPLTEYFLQNSYLDELNFTNPLGMKGE----IAEAYADVIKQMWSGRHYS--VVP- 313
Query: 57 EMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK------------DSSIV 104
+ + V QF +Q D + LS+ L+ LH LN K K D +
Sbjct: 314 RVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKNKEYIELRDADGRPDQEVA 373
Query: 105 YKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEV 164
+ + + + + + + L+ E +K + T PF YL+ P P+ K+ V
Sbjct: 374 GEAWRNHRR-RNDSVIVDKFHGLFKSTLVCPECHKVSVTFDPFCYLSV---PLPVSKERV 429
Query: 165 LE 166
+E
Sbjct: 430 ME 431
>gi|426249549|ref|XP_004018512.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Ovis
aries]
Length = 963
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + Y
Sbjct: 810 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDPSARPY------ 863
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 864 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLACEDQIVTKA 914
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 915 AYVLFYQRR 923
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 490
>gi|154152175|ref|NP_001093789.1| ubiquitin carboxyl-terminal hydrolase 4 [Bos taurus]
gi|158513811|sp|A6QR55.1|UBP4_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|151554732|gb|AAI50121.1| USP4 protein [Bos taurus]
gi|296474786|tpg|DAA16901.1| TPA: ubiquitin specific protease 4 [Bos taurus]
Length = 963
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + Y
Sbjct: 810 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDPSARPY------ 863
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 864 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLACEDQIVTKA 914
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 915 AYVLFYQRR 923
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 490
>gi|440893726|gb|ELR46396.1| Ubiquitin carboxyl-terminal hydrolase 4 [Bos grunniens mutus]
Length = 963
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + Y
Sbjct: 810 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDPSARPY------ 863
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 864 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLACEDQIVTKA 914
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 915 AYVLFYQRR 923
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 490
>gi|389739172|gb|EIM80366.1| hypothetical protein STEHIDRAFT_172638 [Stereum hirsutum FP-91666
SS1]
Length = 1408
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 71/316 (22%), Positives = 132/316 (41%), Gaps = 31/316 (9%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
+ Q F ++ ++W S SP +++ ++ QF +EQ D +FLSW L+ LH
Sbjct: 1097 IAQAFAHILHEIWQGE--MSFFSPISFRRSICSYA-SQFAGSEQHDSQEFLSWLLDALHE 1153
Query: 92 ALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVE----------------LEEKVRQRLLLT 135
LN K + V ++ ++I + + + R R+
Sbjct: 1154 DLNRVISKSTYEVTPEREAELEKLPQQIASEQEWRIYRMRNDSIVVDFFQGQFRNRMECM 1213
Query: 136 EEYKETETESPFLYLTCDLPPPPLFKDEV-LENIIPQVNLYTILTKFNNESEKEYKTYKE 194
+K + T + F+ L+ LP P ++ L+N + ++ K + + K ++
Sbjct: 1214 TCHKTSTTYNSFMNLS--LPVPTSKHGKITLQNCLDAFVKEEVMEKSDAWNCPNCKVLRK 1271
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDI----LTPEVKAK 250
K+ ++ LPP L++ KRF+ F +K V+FP+K ++ + L P V
Sbjct: 1272 A-TKQLSLSRLPPVLLIQFKRFSFKGPFTDKIDKHVDFPLKGLELTNYMPPPLPPGVDRG 1330
Query: 251 YESTMY--DLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDI 308
+ Y D + + YDL A H G S+G Y + + G+W D +T
Sbjct: 1331 QAAVQYGNDDPRQQTPPYKYDLYAVTNHFGSLSSGHYTAFINSR--GQWLYCDDSRITPS 1388
Query: 309 LPQMITLTEAYIQIYE 324
+ + AY+ Y+
Sbjct: 1389 DAKEVVGKPAYVLYYK 1404
>gi|357620428|gb|EHJ72623.1| hypothetical protein KGM_20167 [Danaus plexippus]
Length = 563
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 121/288 (42%), Gaps = 47/288 (16%)
Query: 50 KSHVSPHEMLQAVVLWSR-KQFQFTEQSDPIDFLSWFLNTLHRALN--------GTKKKD 100
K+ +SP + +V+W +F+ +Q D +FL + L+ LH L G K
Sbjct: 302 KAAISPECLF--LVIWKVVPRFRGYQQQDAHEFLRYMLDRLHTELQQLVPDRPEGVKAP- 358
Query: 101 SSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLP----- 155
+SIV F G+++ + R + E++ PFL L+ +LP
Sbjct: 359 ASIVTAVFGGTLQSEVRCLAC----------------GTESKKFDPFLDLSLELPESGRH 402
Query: 156 PPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKR 215
P+ + L + + L F + + + K+ K+ +++R LP L L++KR
Sbjct: 403 DAPVSLTDCLASFVQIEELADTERYFCSSCKCKQKSTKQFWIRR-----LPNVLCLHLKR 457
Query: 216 FTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIV 275
F + +F K T ++FP+ ++D + P V D ++ S +YDL A IV
Sbjct: 458 FRWHNYFRTKVDTSISFPLLSLDMSGFVLPNVP--------DTRRSGRGSLLYDLAAVIV 509
Query: 276 HDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
H G + G+ + +W+ D V + + YI Y
Sbjct: 510 HHGSGA-GSGHYTAFAINEEQWFHFNDQTVRATDSAAVASCKPYILFY 556
>gi|350424674|ref|XP_003493875.1| PREDICTED: hypothetical protein LOC100741560 [Bombus impatiens]
Length = 979
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 125/342 (36%), Gaps = 45/342 (13%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L + PL +Y L E A + L++ F +++ +LW V ++
Sbjct: 657 CLSNTRPLLEYLLNEQYLADINTSTSSMKGALIKAFSQVIHELW-------EVGGDLVVN 709
Query: 61 AVVLWSRKQ-----FQFTEQSDPIDFLSWFLNTLHRALNGTKKK-------------DSS 102
L S+ Q F Q D +FL + L LH +N K DS
Sbjct: 710 TTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQPIHTDIPEMYTDSQ 769
Query: 103 IVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKD 162
+++ ++ + I V + + +R L T + T PF L+ LP P
Sbjct: 770 KAVESWKRYLRSEDSMIVDVFVGQ-LRSSLHCTSCDHVSVTLDPFWDLS--LPIPARSGT 826
Query: 163 EVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFF 222
L + +L + + + + K F I P L++++KRF+ F
Sbjct: 827 VKLSQCLEHFTREEVLDGDEKPTCSKCQ-MRRKCTKSFSIQKFPKILVIHLKRFSPMERF 885
Query: 223 VEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSN 282
K +V+FP+ +D P V Y+L H G +
Sbjct: 886 RSKLNVMVDFPLTGLDLSAFAAPRVPG----------------CTYNLYGVANHSGTTHS 929
Query: 283 GTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
G Y + H G+W+E D V+ + + + EAY+ YE
Sbjct: 930 GHYTAYCKHPYSGEWHEYNDSRVSVVPARSVVSNEAYVLFYE 971
>gi|403291354|ref|XP_003936760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Saimiri
boliviensis boliviensis]
Length = 941
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + + Y
Sbjct: 788 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNQSARPY------ 841
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 842 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 892
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 893 AYVLFYQRR 901
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKR-PPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 297 CLSNTAPLTDYFLKDEYEAEINRINPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 353
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK S+V K
Sbjct: 354 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSVVAKEA 413
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E +K + T PF YLT P PL KD V+E
Sbjct: 414 WENHRLRNDSVIVDTFHGLFKSTLVCPECFKVSVTFDPFCYLTL---PLPLKKDRVME 468
>gi|126335815|ref|XP_001367983.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2
[Monodelphis domestica]
Length = 920
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++++ + + Y
Sbjct: 766 KKFDLWSLPKVLVVHLKRFSYNRYWRDKLDTVVEFPIRDLHMSEFVCDPAAGPY------ 819
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 820 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 870
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 871 AYVLFYQRR 879
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL +YFL++ A + R P + + + EL++++W+ RN + V+P M
Sbjct: 271 CLSNTAPLTEYFLKDKYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRN--TQVAPR-MF 327
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK------KDSS-----IVYKTF 108
+ V QF +Q D + L++ L+ LH LN KK KD++ +V K
Sbjct: 328 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDLVVAKEA 387
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD +E
Sbjct: 388 WENHRLRNDSVIVDTFHGLFKSTLVCPECSKISVTFDPFCYLTL---PLPLKKDRTME 442
>gi|74190269|dbj|BAE37232.1| unnamed protein product [Mus musculus]
Length = 199
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + Y
Sbjct: 46 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSARPY------ 99
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + ++ GKWY D V+ I
Sbjct: 100 ---------VYDLIAVSNHYGAMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKA 150
Query: 318 AYIQIYELRTTPSPTAMSEG 337
AY+ Y+ R + S G
Sbjct: 151 AYVLFYQRRDDECSSTSSLG 170
>gi|351711884|gb|EHB14803.1| Ubiquitin carboxyl-terminal hydrolase 4 [Heterocephalus glaber]
Length = 964
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + Y
Sbjct: 810 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDPSARPY------ 863
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
MYDL+A H G G Y + ++ GKWY D +V+ I
Sbjct: 864 ---------MYDLIAVSNHYGAMGVGHYTAYAKNRFSGKWYYFDDSNVSLASEDQIVTKA 914
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 915 AYVLFYQRR 923
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--THVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLLPKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 490
>gi|307211269|gb|EFN87455.1| Ubiquitin carboxyl-terminal hydrolase 2 [Harpegnathos saltator]
Length = 342
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 126/336 (37%), Gaps = 33/336 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L + PL +Y L E A + L++ F +++ +LW HV L+
Sbjct: 20 CLSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIHELWEVGG--DHVVNTTSLK 77
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK---------DSSIVYKTFLGS 111
+ + +F Q D +FL + L LH +N K DS + + S
Sbjct: 78 SQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTTKLPPIHGDIPDSYTETQKAVES 137
Query: 112 MKVKTRKIPPVELE---EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENI 168
K R + ++ ++R L T + T PF L+ LP P L
Sbjct: 138 WKRYLRSEDSMVVDVFVGQLRSSLHCTSCDHVSVTLDPFWDLS--LPIPARSGTVKLSQC 195
Query: 169 IPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPT 228
+ +L + + + + K F I P L++++KRF+ F K
Sbjct: 196 LEHFTREEVLDGDEKPTCSKCQM-RRKCTKSFSIQKFPKILVIHLKRFSPMERFRGKLNV 254
Query: 229 IVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
+V+FP+ +D P+V Y+L H G +G Y +
Sbjct: 255 MVDFPLTGLDLSAFAAPKVPG----------------CTYNLYGVANHSGTTYSGHYTAY 298
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
H G+W+E D V+ + + + +EAY+ YE
Sbjct: 299 CKHPYSGEWHEYNDSRVSVVSARSVVSSEAYVLFYE 334
>gi|126335813|ref|XP_001367947.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Monodelphis domestica]
Length = 965
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++++ + + Y
Sbjct: 811 KKFDLWSLPKVLVVHLKRFSYNRYWRDKLDTVVEFPIRDLHMSEFVCDPAAGPY------ 864
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 865 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 915
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 916 AYVLFYQRR 924
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL +YFL++ A + R P + + + EL++++W+ RN + V+P M
Sbjct: 316 CLSNTAPLTEYFLKDKYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRN--TQVAP-RMF 372
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK------KDSS-----IVYKTF 108
+ V QF +Q D + L++ L+ LH LN KK KD++ +V K
Sbjct: 373 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDLVVAKEA 432
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD +E
Sbjct: 433 WENHRLRNDSVIVDTFHGLFKSTLVCPECSKISVTFDPFCYLTL---PLPLKKDRTME 487
>gi|260166690|ref|NP_083439.2| putative ubiquitin carboxyl-terminal hydrolase 50 [Mus musculus]
gi|81892336|sp|Q6P8X6.1|UBP50_MOUSE RecName: Full=Putative ubiquitin carboxyl-terminal hydrolase 50;
AltName: Full=Deubiquitinating enzyme 50; AltName:
Full=Ubiquitin thioesterase 50; AltName:
Full=Ubiquitin-specific-processing protease 50
gi|38174591|gb|AAH61020.1| Ubiquitin specific peptidase 50 [Mus musculus]
gi|148696219|gb|EDL28166.1| ubiquitin specific peptidase 50, isoform CRA_a [Mus musculus]
Length = 390
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 128/336 (38%), Gaps = 44/336 (13%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
LC V+PL +YFL +K+ + + F LM +W VSP L
Sbjct: 62 CLCSVSPLVEYFLSGKYITALKKDCSE----VTTAFAYLMTDMW--LGDSDCVSPEIFLS 115
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV + T+Q D +FL + LN LH AL KK V + G + RK+P
Sbjct: 116 AVGSLYPAFLKKTQQ-DAQEFLIYVLNELHEAL---KKHCRRRVNEKRTG--QSCCRKVP 169
Query: 121 PVE-------LEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK---DEVLENIIP 170
E E ++ + + T F L+ LP P ++ + L+
Sbjct: 170 AQETSIITRLFEGQLSYSITCLKCESCTHKNEVFTILS--LPIPSDYECSLQDCLQCFFQ 227
Query: 171 QVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIV 230
Q L ++N+ + K+ R I+ +P ++ + KRF K T +
Sbjct: 228 QDTL-----TWSNQIYCSFCEIKQEAAVRTTISKVPKIIVFHFKRFDIQGTVKRKLRTDI 282
Query: 231 NFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLY 290
++P+ N+D + P + + MY+L A + H G+ G Y
Sbjct: 283 HYPLTNLDLTPYICPVFR---------------KHPMYNLCAVVNHFGDLDGGHYTAFCK 327
Query: 291 HKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
+ WY D V++I + AY+ Y +
Sbjct: 328 NSVTQAWYSFDDTRVSEIPDTSVQTATAYLLFYSCQ 363
>gi|391338083|ref|XP_003743391.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like
[Metaseiulus occidentalis]
Length = 722
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 65/162 (40%), Gaps = 22/162 (13%)
Query: 170 PQVNLYTILTKFNNESE----KEYKTYK----ENFLKRFEITSLPPYLILYVKRFTKNTF 221
P V+L L F + E Y K N +K ++ LP L +++KRF
Sbjct: 411 PSVSLTDCLAAFFSADELKGDNMYSCGKCNKLRNGVKYSKLMELPEVLCIHLKRFRHELM 470
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
F K V FP++ +D P + K T Y+L A I H G
Sbjct: 471 FSTKISNYVQFPLEGLDMTPFTHPHARDKV--------------TTYELTAVICHHGTAG 516
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + G+WYE D++VT + + EAY+ Y
Sbjct: 517 MGHYICYAMNDCDGQWYEYDDVYVTQVDASTVANCEAYVLFY 558
>gi|391327504|ref|XP_003738238.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like
[Metaseiulus occidentalis]
Length = 779
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 66/162 (40%), Gaps = 22/162 (13%)
Query: 170 PQVNLYTILTKFNNESEKE----YKTYK----ENFLKRFEITSLPPYLILYVKRFTKNTF 221
P V+L L F + E E Y K N +K + LP L +++KRF
Sbjct: 353 PSVSLTDCLAAFFSADELEGDNMYSCGKCNKLRNGVKYSKPMELPEVLCIHLKRFRHELM 412
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
F K + V FP++ +D P + K T Y+L A I H G
Sbjct: 413 FSTKISSYVQFPLEGLDMTPFTHPHARDKV--------------TTYELTAVICHHGTAG 458
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + G+WYE D++VT + + EAY+ Y
Sbjct: 459 MGHYICYAMNDCDGQWYEYDDVYVTQVEASTVANCEAYVLFY 500
>gi|340727179|ref|XP_003401926.1| PREDICTED: hypothetical protein LOC100649397 [Bombus terrestris]
Length = 977
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 125/342 (36%), Gaps = 45/342 (13%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L + PL +Y L E A + L++ F +++ +LW V ++
Sbjct: 655 CLSNTRPLLEYLLNEQYLADINTSTSSMKGALIKAFSQVIHELW-------EVGGDLVVN 707
Query: 61 AVVLWSRKQ-----FQFTEQSDPIDFLSWFLNTLHRALNGTKKK-------------DSS 102
L S+ Q F Q D +FL + L LH +N K DS
Sbjct: 708 TTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQPIHTDIPEMYTDSQ 767
Query: 103 IVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKD 162
+++ ++ + I V + + +R L T + T PF L+ LP P
Sbjct: 768 KAVESWKRYLRSEDSMIVDVFVGQ-LRSSLHCTSCDHVSVTLDPFWDLS--LPIPARSGT 824
Query: 163 EVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFF 222
L + +L + + + + K F I P L++++KRF+ F
Sbjct: 825 VKLSQCLEHFTREEVLDGDEKPTCSKCQ-MRRKCTKSFSIQKFPKILVIHLKRFSPMERF 883
Query: 223 VEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSN 282
K +V+FP+ +D P V Y+L H G +
Sbjct: 884 RSKLNVMVDFPLTGLDLSAFAAPRVPG----------------CTYNLYGVANHSGTTHS 927
Query: 283 GTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
G Y + H G+W+E D V+ + + + EAY+ YE
Sbjct: 928 GHYTAYCKHPYSGEWHEYNDSRVSVVPARSVVSNEAYVLFYE 969
>gi|345787398|ref|XP_533829.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Canis
lupus familiaris]
Length = 964
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + D
Sbjct: 810 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVC------------D 857
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y +YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 858 LSARPY---VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 914
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 915 AYVLFYQRR 923
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTDYFLKDKYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--THVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 490
>gi|432911380|ref|XP_004078651.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Oryzias
latipes]
Length = 911
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 14/130 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF F K T V+FP++ +D L+ + A
Sbjct: 567 NGVKFCKMQKLPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLSKDSSA----- 621
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
++T YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 622 ---------QTTNYDLLSVICHHGTASSGHYIAYCRNDSNNLWYEFDDQSVTEVSESCVQ 672
Query: 315 LTEAYIQIYE 324
EAY+ Y+
Sbjct: 673 NAEAYVLFYK 682
>gi|198433676|ref|XP_002129026.1| PREDICTED: similar to ubiquitin specific protease 41 [Ciona
intestinalis]
Length = 543
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 136/357 (38%), Gaps = 74/357 (20%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPP---GDSSFLLVQRFGELMRKLWNPRNFKSHVSPHE 57
L + T LR+Y + E + R GD L++ F E++ +LW P N SH SP+
Sbjct: 218 CLSNTTILREYCMDETYKGEINRNSPMKGD----LMRAFVEVLVRLWKP-NGISH-SPNN 271
Query: 58 MLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTK-------------------- 97
+ +S +F EQ D +FL + L LH +N +
Sbjct: 272 FKSKIQKFS-PRFMGYEQQDCQEFLRFLLEGLHEDINRVRIKSKEPLRELSHLSPQEKAR 330
Query: 98 -------KKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETE-TESPFLY 149
KD S ++ F+G ++ L +E + T T PF
Sbjct: 331 ATWSWYTTKDDSFIFDLFVGQLESS-----------------LECQECRHTSLTYDPFWD 373
Query: 150 LTCDLP-PPPLFKDEVLENIIPQVNLYTILTKFNNESE--KEYKTYKENFLKRFEITSLP 206
L+ LP ++ +EV I ++ +T + + + E + K+ I P
Sbjct: 374 LS--LPISKKMYSNEVT-TITDCLDNFTREETLDKDEKPICERCKVRRTMTKKLSIHKFP 430
Query: 207 PYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYEST 266
L+L++KRF + + + +K +V FPV +++ + + + T
Sbjct: 431 KVLVLHLKRFNEGSRYRQKLNNLVKFPVTSLNLRNFASKTREGNLPPT------------ 478
Query: 267 MYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
YDL A H G G Y + Y+ W E D V I + EAY+ Y
Sbjct: 479 -YDLYAVSNHCGSCYGGHYTAYCYNSSSHAWLEYNDSSVNPISDGDVCTKEAYVLFY 534
>gi|347970708|ref|XP_310382.7| AGAP003821-PA [Anopheles gambiae str. PEST]
gi|333466796|gb|EAA05977.6| AGAP003821-PA [Anopheles gambiae str. PEST]
Length = 1429
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K + +LP L +++KRF + + K + V+FP+ +D L + ++
Sbjct: 615 NGVKYSRVLALPEMLCVHLKRFRHDLSYSSKISSPVHFPLYGLDMRPYLHKDCRS----- 669
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
E T YDL A I H G G Y H GKW+E D VT + P+ +
Sbjct: 670 ---------EVTSYDLCAVICHHGTVGGGHYTSFAKHDPTGKWFEFDDQLVTQVTPEHVQ 720
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 721 SCEAYVLFY 729
>gi|390179554|ref|XP_003736924.1| GA19137, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859895|gb|EIM52997.1| GA19137, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 328
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 133/315 (42%), Gaps = 61/315 (19%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
+++ L+++LWN + +K S L++VV + F+ +Q D +FL+ ++ LH
Sbjct: 37 VIEEVAALIKELWNGQ-YKCVASRD--LRSVVGQYQNIFRGVDQQDSHEFLTILMDWLHS 93
Query: 92 ALNG--------------------TKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQR 131
L TK K+S I+ F G MK + +
Sbjct: 94 DLQTLDVSRMRETIGAAEQAWLDFTKAKES-IILHLFYGQMKSTVKCVTC---------- 142
Query: 132 LLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKT 191
KE+ T F L+ +LPP +E N +++Y + + KT
Sbjct: 143 ------NKESATYECFSNLSLELPPNA---NECQLNQC--MDMYFSGERIQGWNCPNCKT 191
Query: 192 YKENFLKRFEITSLPPYLILYVKRF---TKNTFFVEKNPTIVNFPVKNVDFGDILTPEVK 248
K +K+ +I+ LPP L++++KRF T NT K ++FP++N++ ++P +
Sbjct: 192 -KRAAIKKLDISKLPPVLVVHLKRFYADTSNTGSYAKKQNFLSFPLQNLE----MSPYI- 245
Query: 249 AKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDI 308
A+ ES +A T Y L A H G G Y G+WY+ D V+ +
Sbjct: 246 ARAES------RAAKPKT-YQLYAVSNHYGTMEGGHYTAFCKSPNYGRWYKFDDQVVSTL 298
Query: 309 LPQMITLTEAYIQIY 323
+ + AYI Y
Sbjct: 299 DTSNVISSAAYILFY 313
>gi|345787400|ref|XP_003432923.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Canis
lupus familiaris]
Length = 917
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + D
Sbjct: 763 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVC------------D 810
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y +YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 811 LSARPY---VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 867
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 868 AYVLFYQRR 876
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 272 CLSNTAPLTDYFLKDKYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--THVAPR-MF 328
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 329 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 388
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 389 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 443
>gi|410951165|ref|XP_003982270.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Felis
catus]
Length = 964
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + D
Sbjct: 810 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVC------------D 857
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y +YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 858 LSARPY---VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 914
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 915 AYVLFYQRR 923
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 490
>gi|344252839|gb|EGW08943.1| Ubiquitin carboxyl-terminal hydrolase 4 [Cricetulus griseus]
Length = 940
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + Y
Sbjct: 786 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDRSARPY------ 839
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 840 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 890
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 891 AYVLFYQRR 899
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL +YFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 296 CLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--THVAPR-MF 352
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK------KDSS-----IVYKTF 108
+ V QF +Q D + L++ L+ LH LN KK KD+S +V K
Sbjct: 353 KTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLEPKDASGRPDAVVAKEA 412
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 413 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 467
>gi|410951167|ref|XP_003982271.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Felis
catus]
Length = 917
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + D
Sbjct: 763 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVC------------D 810
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y +YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 811 LSARPY---VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 867
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 868 AYVLFYQRR 876
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 272 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 328
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 329 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 388
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 389 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 443
>gi|342187290|ref|NP_001230117.1| ubiquitin specific peptidase 4 (proto-oncogene) [Sus scrofa]
Length = 963
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + D
Sbjct: 810 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVC------------D 857
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y +YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 858 LSARPY---VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 914
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 915 AYVLFYQRR 923
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKISVTFDPFCYLTL---PLPLKKDRVME 490
>gi|395516315|ref|XP_003762336.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 4 [Sarcophilus harrisii]
Length = 989
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++++ + + Y
Sbjct: 835 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRDLHMSEFVCDPAAGPY------ 888
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 889 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 939
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 940 AYVLFYQRR 948
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL +YFL+ A + R P + + + EL++++W+ RN + V+P M
Sbjct: 339 CLSNTAPLTEYFLKNEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRN--TQVAP-RMF 395
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK------KDSS-----IVYKTF 108
+ V QF +Q D + L++ L+ LH LN KK KD++ +V K
Sbjct: 396 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDLVVAKEA 455
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD +E
Sbjct: 456 WENHRLRNDSVIVDTFHGLFKSTLVCPECSKISVTFDPFCYLTL---PLPLKKDRTME 510
>gi|432092405|gb|ELK25020.1| Ubiquitin carboxyl-terminal hydrolase 4 [Myotis davidii]
Length = 901
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ + ++ +K T+V FPV+ ++ + + Y
Sbjct: 747 KKFDLWSLPKILVVHLKRFSYSRYWRDKLDTVVEFPVRGLNMSEFVCDPSARPY------ 800
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y H +K GKWY D +V+ I
Sbjct: 801 ---------VYDLIAVSNHYGAMGVGHYTAHAKNKLNGKWYYFDDSNVSLASEDQIVTKA 851
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 852 AYVLFYQRR 860
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFLR+ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 256 CLSNTAPLTDYFLRDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 312
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 313 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELQDANGRPDAVVAKEA 372
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 373 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 427
>gi|354476435|ref|XP_003500430.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Cricetulus
griseus]
Length = 967
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + Y
Sbjct: 813 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDRSARPY------ 866
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 867 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 917
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 918 AYVLFYQRR 926
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL +YFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 323 CLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--THVAPR-MF 379
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK------KDSS-----IVYKTF 108
+ V QF +Q D + L++ L+ LH LN KK KD+S +V K
Sbjct: 380 KTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLEPKDASGRPDAVVAKEA 439
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 440 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 494
>gi|299689340|pdb|3N3K|A Chain A, The Catalytic Domain Of Usp8 In Complex With A Usp8
Specific Inhibitor
Length = 396
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 143/343 (41%), Gaps = 50/343 (14%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 80 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQ--YRYISP 133
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYK----TFLGS 111
+ + + QF Q D + L + ++ LH LN K D+ YK L
Sbjct: 134 KD-FKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLN---KADNRKRYKEENNDHLDD 189
Query: 112 MKVK----------TRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK 161
K I + + + + +K++ T F+YL+ LP K
Sbjct: 190 FKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLS--LPLASTSK 247
Query: 162 DEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTF 221
L++ + + LT NN + + + LK+ EI LPP L++++KRF+ +
Sbjct: 248 -CTLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGR 305
Query: 222 FVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP 280
+ +K T V+FP++N+D ++ P+ K Y+L + H G
Sbjct: 306 WKQKLQTSVDFPLENLDLSQYVIGPKNNLK----------------KYNLFSVSNHYGGL 349
Query: 281 SNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + +W++ D V+DI + + AYI Y
Sbjct: 350 DGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 392
>gi|145537628|ref|XP_001454525.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422291|emb|CAK87128.1| unnamed protein product [Paramecium tetraurelia]
Length = 472
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 138/349 (39%), Gaps = 40/349 (11%)
Query: 1 ALCHVTPLRDYFLREI-NYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL +YF + + N+ P S + + L+ LW +++ ++P E++
Sbjct: 69 CLSNTQPLTEYFQQNLHNHELNIENPLSSRGQITNAYARLICSLW-KESYQKSINPIELI 127
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK------------DSSIVYKT 107
+ LW+ F Q D + L++ L+ LH LN K K + K
Sbjct: 128 SMIQLWN-PFFVMNSQQDSHELLAFLLDMLHEDLNRVKHKPYIEEKTYDQQPNQQQANKA 186
Query: 108 FLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLEN 167
+ +K I + + + + K + E+ F+YL+ P+ +D L
Sbjct: 187 WSDYLKRNRSIIVDLFQGQSINMLQCMVCNTKSYKFET-FMYLSL-----PIQQDADLIQ 240
Query: 168 IIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNP 227
I + L + N + + K ++ LP L++++KRF + K
Sbjct: 241 CISEYLREEELDEAN-QWHCSKCKSVKKSKKGIKLWKLPNILVIHLKRFKFTANYRCKLR 299
Query: 228 TIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRV 287
++NFP+ N+D + ++ E YDL I H G +G Y
Sbjct: 300 WLINFPMYNLDLSNY------------------SEQEQATYDLYGVINHSGTLHSGHYTS 341
Query: 288 HLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTAMSE 336
+ +K KWY D + +I+ + + ++AY+ Y + S SE
Sbjct: 342 NCKNKDTQKWYNFDDTRIKEIMEKEVLTSDAYLLFYYKNSVDSYERQSE 390
>gi|67972114|dbj|BAE02399.1| unnamed protein product [Macaca fascicularis]
Length = 331
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 143/343 (41%), Gaps = 50/343 (14%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 7 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQ--YRYISP 60
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKT----FLGS 111
+ + + QF Q D + L + ++ LH LN K D+ YK L
Sbjct: 61 KD-FKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLN---KADNRKRYKEENNEHLDD 116
Query: 112 MKVK----------TRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK 161
K I + + + + +K++ T F+YL+ LP K
Sbjct: 117 FKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLS--LPLASTSK 174
Query: 162 DEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTF 221
L++ + + LT NN + + + LK+ EI LPP L++++KRF+ +
Sbjct: 175 -CTLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDDR 232
Query: 222 FVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP 280
+ +K T V+FP++N+D ++ P+ K Y+L + H G
Sbjct: 233 WKQKLQTSVDFPLENLDLSQYVIGPKNNLK----------------KYNLFSVSNHYGGL 276
Query: 281 SNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + +W++ D V+DI + + AYI Y
Sbjct: 277 DGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 319
>gi|403358774|gb|EJY79042.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 847
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 150/380 (39%), Gaps = 88/380 (23%)
Query: 1 ALCHVTPLRDYFLREINYA--RVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEM 58
L V PL D+F+ ++ P G + + R+ L++ +W + K + P +
Sbjct: 240 CLSSVQPLTDFFIGNLHKKLLNTTNPMGTGGDVTL-RYANLIKDIWQGKEEK--IYPAQF 296
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVK--- 115
L+ + + +Q D +FL++ L++LH LN K L +MK K
Sbjct: 297 LKTLSKHA-PHLVCGQQQDAQEFLAYILDSLHEDLNRADK----------LTNMKQKREK 345
Query: 116 --TRKIPPVELEEKVRQRLLLT---EEYKETET-ES------------------------ 145
++K E E+ + +LL T EE +E + ES
Sbjct: 346 ELSKKSSKNEDEDSLLDKLLDTDPSEELQEHQAYESWKDHLLNNRSIIVDLFQGQLKSTL 405
Query: 146 -------------PFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTY 192
F+YLT +P + D LE + + IL + + ++K
Sbjct: 406 KCLVCNHMSIKFDSFMYLTIPIPQK-MMSDPKLEECVEEFTKEEIL-----DGQNKWKCP 459
Query: 193 K----ENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVK 248
K + K+ +I LP LI+ +KRF N K +V FP+KN+D LTP V
Sbjct: 460 KCDKFQRATKKIDIWKLPSVLIINLKRFEFNQKKKAKINDLVEFPLKNLD----LTPYVS 515
Query: 249 AKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDI 308
K + E +YDL A H+G + G Y + H+ +WY D V I
Sbjct: 516 -----------KLQREKPIYDLFAVANHEGYLTGGHYYSYSKHRNNQQWYYFDDEVVKKI 564
Query: 309 L-PQMITLTEAYIQIYELRT 327
+ + EAYI Y T
Sbjct: 565 KNEEKVVSKEAYILFYSKMT 584
>gi|196001277|ref|XP_002110506.1| hypothetical protein TRIADDRAFT_22897 [Trichoplax adhaerens]
gi|190586457|gb|EDV26510.1| hypothetical protein TRIADDRAFT_22897 [Trichoplax adhaerens]
Length = 477
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 114/276 (41%), Gaps = 50/276 (18%)
Query: 69 QFQFTEQSDPIDFLSWFLNTLHRALN-------GTKKKDSSIVYKTFLGSMKVKTRKIPP 121
+F+ Q D +F+ + L+ LH L G K+ ++IV F GS+
Sbjct: 233 RFRGYHQQDAHEFMRYLLDRLHTELGRMRAPYYGNKQVSNTIVTTLFRGSL--------- 283
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK--DEVLENIIPQVNLYTILT 179
+ + L + +T+S FL L+ D+P + + + +N I L L+
Sbjct: 284 ------LNEVNCLVCDINSRKTDS-FLDLSLDIPSEFISRRNKSIGDNDISICKLTDCLS 336
Query: 180 KFNN-----ESEKEYK---TYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVN 231
F +SE Y T K+ K+ I +LP L L++KRF ++ +K V
Sbjct: 337 SFTELEKLEDSELYYCSSCTKKQLSTKQLRIKTLPRVLCLHLKRFRWSSCIRKKLDIYVE 396
Query: 232 FPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLY 290
FP+ +D LT L + +MYDL+A + H G +G Y + Y
Sbjct: 397 FPMIGLDMKPYLT-------------LKQTSNGRSMYDLIAVVEHHGSGYGSGHYTAYAY 443
Query: 291 HKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
G WY D V+ + + + +AYI Y R
Sbjct: 444 KDG---WYHFNDSTVSVAMEEHVIKCKAYILFYVQR 476
>gi|386766198|ref|NP_001247227.1| UBPY ortholog, isoform B [Drosophila melanogaster]
gi|371941032|gb|AEX60474.1| FI18309p1 [Drosophila melanogaster]
gi|383292853|gb|AFH06545.1| UBPY ortholog, isoform B [Drosophila melanogaster]
Length = 367
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 135/299 (45%), Gaps = 29/299 (9%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
+++ L+++LWN + +K S L+ VV +K F+ +Q D +FL+ ++ LH
Sbjct: 81 VIEEVAALIKELWNGQ-YKCVAS--RDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHS 137
Query: 92 ALNG----TKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPF 147
L +++ S K +L K K I + +++ + +KE+ T F
Sbjct: 138 DLQTLHVPRQREMISASEKAWLEFTKAKESMILHL-FYGQMKSTVKCVACHKESATYESF 196
Query: 148 LYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPP 207
L+ +LPP + + + +++Y + + + KT K + +K+ +I+ LPP
Sbjct: 197 SNLSLELPP-----NSNVCQLNQCMDMYFSGERIHGWNCPSCKT-KRDAIKKLDISKLPP 250
Query: 208 YLILYVKRF---TKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYE 264
L++++KRF N+ K + FP++N+D + P + A+ ES +A
Sbjct: 251 VLVVHLKRFYADPSNSGSYMKKQNYLRFPLENLD----MNPYI-ARAES------RAVTP 299
Query: 265 STMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
T Y L A H G G Y GKW++ D V+ + + + AYI Y
Sbjct: 300 KT-YQLYAVSNHYGTMEGGHYTAFCKSANYGKWFKFDDQVVSALDSSNVVSSAAYILFY 357
>gi|395326677|gb|EJF59084.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 1201
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 75/327 (22%), Positives = 131/327 (40%), Gaps = 42/327 (12%)
Query: 25 PGDSSFLLVQRFGELMRKLW-------NPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSD 77
P + +L F ++R +W +P F+ + H QF +EQ D
Sbjct: 886 PMGTKGVLALAFANILRDMWQGEGGTLSPVTFRRSICSHA----------PQFSGSEQHD 935
Query: 78 PIDFLSWFLNTLHRALNGTKKK----------------DSSIVYKTFLGSMKVKTRKIPP 121
+FLS+ L+ LH LN +K + I + +++ +
Sbjct: 936 SQEFLSFLLDGLHEDLNRILQKRNIESTPEREAELEKLPTQIASEQEWQIYRMRDDSLIV 995
Query: 122 VELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEV-LENIIPQVNLYTILTK 180
+ + R R+ +K + T + F+YLT LP P +V L++ I ++ K
Sbjct: 996 DFFQGQYRNRMECLTCHKTSTTYNTFMYLT--LPIPTGRASKVTLQHCIDAFVKEEVMEK 1053
Query: 181 FNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
+ + K ++ K+ ++ LPP L++++KRF+ F +K T V FP+K +D
Sbjct: 1054 SDAWNCPHCKALRKA-TKQLSLSRLPPVLLIHLKRFSAKGPFTDKIETFVEFPLKGLDLT 1112
Query: 241 DILTPEVKA---KYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKW 297
+ + P + D + + YDL A H G S G Y + + G W
Sbjct: 1113 NYMPPPLPPGAIGVPPLSPDDPRCQLPPYRYDLYAVTNHFGTLSTGHYTAFIASR--GGW 1170
Query: 298 YEIQDLHVTDILPQMITLTEAYIQIYE 324
D VT + + AYI Y+
Sbjct: 1171 LYCDDSRVTPADAKDVVGKPAYILFYK 1197
>gi|194376994|dbj|BAG63058.1| unnamed protein product [Homo sapiens]
Length = 271
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 109/275 (39%), Gaps = 40/275 (14%)
Query: 70 FQFTEQSDPIDFLSWFLNTLHRALNGTKKKDS-----------SIVYKTFLGSMKVKTRK 118
F+ +Q D +F+ + L+ LH L G S S K +
Sbjct: 4 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSTLSASNKCCINGASTVVTA 63
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
I L+ +V + TE K PFL L+ D+P K + P +L L
Sbjct: 64 IFGGILQNEVNCLICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCL 119
Query: 179 TKFNNESE-KEYKTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIV 230
F + E E + Y K+ K+F I LP L L++KRF + K T V
Sbjct: 120 RSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYV 179
Query: 231 NFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVH 288
FP++ +D +L PE + ES +YDL A +VH G +G Y +
Sbjct: 180 EFPLRGLDMKCYLLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAY 226
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
H+ G+W+ D VT + + +AYI Y
Sbjct: 227 ATHE--GRWFHFNDSTVTLTDEETVVKAKAYILFY 259
>gi|432892779|ref|XP_004075833.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Oryzias
latipes]
Length = 667
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 17/131 (12%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F I P L+L++KRF++ K T VNFP+K++D + +
Sbjct: 551 KKFRIQKFPKILVLHLKRFSE-ARRTSKLSTFVNFPLKDLD----------------LRE 593
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+ MY+L A H G G Y + + G+WY D VT + + ++
Sbjct: 594 FASGNSTNAMYNLYAVSNHSGTTMGGHYTAYCRNPNSGEWYTFNDSRVTPMSSSQVRSSD 653
Query: 318 AYIQIYELRTT 328
AY+ YEL ++
Sbjct: 654 AYVLFYELASS 664
>gi|326669890|ref|XP_002663119.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Danio rerio]
Length = 990
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 18/189 (9%)
Query: 138 YKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFL 197
Y E E E + + D+P + + + L+T + E+ T K + L
Sbjct: 774 YNENEAEKYIKHQSMDVP-----HQQTTVQLQECIELFTTVETLEEENPWYCPTCKRHQL 828
Query: 198 --KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTM 255
K+ ++ SLP LI+++KRF+ + EK TIV FP++++DF L +
Sbjct: 829 ATKKLDLWSLPEVLIIHLKRFSYTKYSREKLDTIVEFPLRDLDFSGFL-----------L 877
Query: 256 YDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITL 315
V + YDL++ H G +G Y + +K G+WY D VT + I
Sbjct: 878 KKTVNSTEPPCPYDLISVSNHYGGLRDGHYTSYARNKDNGQWYYFDDSKVTYAREEQIVT 937
Query: 316 TEAYIQIYE 324
+ AY+ Y+
Sbjct: 938 SAAYLLFYQ 946
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 28/183 (15%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
L + PL +YFL+ E+N++ G+ + + + ++++++W+ R++ V P
Sbjct: 259 CLSNTPPLTEYFLKNLYLEELNFSNPLGMKGE----IAEAYADVIKQMWSGRHYS--VVP 312
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK------------DSSI 103
+ + V QF +Q D + LS+ L+ LH LN KKK D +
Sbjct: 313 R-VFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYIELRDADGRPDQEV 371
Query: 104 VYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDE 163
+ + ++ I + L+ E K + T PF YL+ P P+ K+
Sbjct: 372 AEEAWRNHLRRNDSVIVDT-FHGLFKSTLVCPECNKVSVTFDPFCYLSV---PLPVSKER 427
Query: 164 VLE 166
V+E
Sbjct: 428 VME 430
>gi|355728062|gb|AES09403.1| ubiquitin specific peptidase 4 [Mustela putorius furo]
Length = 684
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + D
Sbjct: 531 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVC------------D 578
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y +YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 579 LSARPY---VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 635
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 636 AYVLFYQRR 644
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ SHV+P M
Sbjct: 40 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--SHVAPR-MF 96
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 97 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 156
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 157 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 211
>gi|344275822|ref|XP_003409710.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like isoform 2
[Loxodonta africana]
Length = 914
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + D
Sbjct: 760 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVC------------D 807
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y +YDL+A H G G Y + +K GKWY D V+ I
Sbjct: 808 LSARPY---VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSSVSLASEDQIVTKA 864
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 865 AYVLFYQRR 873
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 272 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--THVAPR-MF 328
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 329 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 388
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD ++E
Sbjct: 389 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRIME 443
>gi|242024423|ref|XP_002432627.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212518097|gb|EEB19889.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 462
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 134/352 (38%), Gaps = 52/352 (14%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPR---------NFKS 51
L + PL +Y L E + L++ F ++++LW P NFKS
Sbjct: 139 CLSNTKPLLEYLLHEEYMTDINFTISAMKGSLIKAFSNVIQELWAPNAEDKIINTTNFKS 198
Query: 52 HVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK------------ 99
+ +F Q D +FL + L LH +N K
Sbjct: 199 QIQKFA----------PRFMGYAQQDAQEFLRYLLEGLHEDVNRVTVKPQQILTDIDDSL 248
Query: 100 -DSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPP 158
D+ + + +++ K+ + + + ++ L T + T PF L+ LP P
Sbjct: 249 SDNQKATEAWKRYLRMDDSKVVDIFVGQ-LKSTLQCTVCGHCSVTFDPFWDLS--LPVPS 305
Query: 159 LFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTK 218
L++ + +L + + +T + K F I P L+L++KRF+
Sbjct: 306 RTGQPKLQSCLDAFTKEEVLDGEEKPTCSKCET-RRKCTKSFSIQKFPKILVLHLKRFSP 364
Query: 219 NTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG 278
+ K V+FP+ N+D L+P K + Y+L ++N H G
Sbjct: 365 TERYRGKLSITVDFPLTNLD----LSPYAANKGQGCTYNLYA----------ISN--HSG 408
Query: 279 EPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
G Y + H G W+E D V+ + + + EAY+ YEL T S
Sbjct: 409 TAYGGHYTAYCKHPYSGNWHEYNDSRVSSLSSRSVVSGEAYVLFYELATQTS 460
>gi|108862978|gb|ABA99902.2| Ubiquitin carboxyl-terminal hydrolase family protein, expressed
[Oryza sativa Japonica Group]
Length = 801
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 14/126 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+ ++ LP LI+++KRF+ + + K T V+FPV ++D +KY +
Sbjct: 666 KKLDLWRLPEILIIHLKRFSYSRYTKNKLETCVDFPVHDLDL---------SKYIGS--- 713
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+ + S Y L A H G G Y ++YH+G WY+ D HV I + I +
Sbjct: 714 --RGQQISNHYRLYAISNHYGSMGGGHYTAYVYHEGKKGWYDFDDRHVGPISEESIKTSA 771
Query: 318 AYIQIY 323
AY+ Y
Sbjct: 772 AYVLFY 777
>gi|345328594|ref|XP_001505377.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Ornithorhynchus
anatinus]
Length = 974
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T V+FP++N+ + + Y
Sbjct: 822 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTQVDFPIRNLCMSEFICDPAAGPY------ 875
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + ++ GKWY D +V+ I
Sbjct: 876 ---------IYDLIAVSNHYGAMGVGHYTAYAKNRLNGKWYYFDDSNVSLASEDQIVTKA 926
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 927 AYVLFYQRR 935
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L ++ PL +YFL + A + R P + + F +L++++W+ RN + V P M
Sbjct: 326 CLSNIAPLTEYFLNDKYEAEINRDNPLGMKGEIAEAFAQLIKQMWSGRN--AQVVPR-MF 382
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK------DSS-----IVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK D++ +V K
Sbjct: 383 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELQDANGRPDLVVAKEA 442
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ + K + T PF YLT P PL KD +E
Sbjct: 443 WDNHRLRNDSVIVDTFHGLFKSTLVCPQCSKISVTFDPFCYLTL---PLPLKKDRTME 497
>gi|344275820|ref|XP_003409709.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like isoform 1
[Loxodonta africana]
Length = 961
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + D
Sbjct: 807 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVC------------D 854
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y +YDL+A H G G Y + +K GKWY D V+ I
Sbjct: 855 LSARPY---VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSSVSLASEDQIVTKA 911
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 912 AYVLFYQRR 920
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--THVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD ++E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRIME 490
>gi|218187268|gb|EEC69695.1| hypothetical protein OsI_39158 [Oryza sativa Indica Group]
Length = 868
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 14/126 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+ ++ LP LI+++KRF+ + + K T V+FPV ++D +KY +
Sbjct: 733 KKLDLWRLPEILIIHLKRFSYSRYTKNKLETCVDFPVHDLDL---------SKYIGS--- 780
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+ + S Y L A H G G Y ++YH+G WY+ D HV I + I +
Sbjct: 781 --RGQQISNHYRLYAISNHYGSMGGGHYTAYVYHEGKKGWYDFDDRHVGPISEESIKTSA 838
Query: 318 AYIQIY 323
AY+ Y
Sbjct: 839 AYVLFY 844
>gi|2580459|gb|AAB82339.1| putative [Mus musculus]
Length = 962
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + Y
Sbjct: 809 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSARPY------ 862
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + ++ GKWY D V+ I
Sbjct: 863 ---------VYDLIAVSNHYGAMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKA 913
Query: 318 AYIQIYELRTTPSPTAMSEG 337
AY+ Y+ R + S G
Sbjct: 914 AYVLFYQRRDDECSSTSSLG 933
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL +YFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--THVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLEPKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD ++E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRIME 490
>gi|148689334|gb|EDL21281.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_a [Mus
musculus]
Length = 915
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + Y
Sbjct: 762 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSARPY------ 815
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + ++ GKWY D V+ I
Sbjct: 816 ---------VYDLIAVSNHYGAMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKA 866
Query: 318 AYIQIYELRTTPSPTAMSEG 337
AY+ Y+ R + S G
Sbjct: 867 AYVLFYQRRDDECSSTSSLG 886
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL +YFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 272 CLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--THVAPR-MF 328
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 329 KTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLEPKDANGRPDAVVAKEA 388
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD ++E
Sbjct: 389 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRIME 443
>gi|74211276|dbj|BAE37701.1| unnamed protein product [Mus musculus]
Length = 582
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + Y
Sbjct: 429 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSARPY------ 482
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + ++ GKWY D V+ I
Sbjct: 483 ---------VYDLIAVSNHYGAMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKA 533
Query: 318 AYIQIYELRTTPSPTAMSEG 337
AY+ Y+ R + S G
Sbjct: 534 AYVLFYQRRDDECSSTSSLG 553
>gi|222617496|gb|EEE53628.1| hypothetical protein OsJ_36905 [Oryza sativa Japonica Group]
Length = 882
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 14/126 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+ ++ LP LI+++KRF+ + + K T V+FPV ++D +KY +
Sbjct: 747 KKLDLWRLPEILIIHLKRFSYSRYTKNKLETCVDFPVHDLDL---------SKYIGS--- 794
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+ + S Y L A H G G Y ++YH+G WY+ D HV I + I +
Sbjct: 795 --RGQQISNHYRLYAISNHYGSMGGGHYTAYVYHEGKKGWYDFDDRHVGPISEESIKTSA 852
Query: 318 AYIQIY 323
AY+ Y
Sbjct: 853 AYVLFY 858
>gi|15030172|gb|AAH11341.1| Usp4 protein [Mus musculus]
Length = 915
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + Y
Sbjct: 762 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSARPY------ 815
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + ++ GKWY D V+ I
Sbjct: 816 ---------VYDLIAVSNHYGAMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKA 866
Query: 318 AYIQIYELRTTPSPTAMSEG 337
AY+ Y+ R + S G
Sbjct: 867 AYVLFYQRRDDECSSTSSLG 886
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL +YFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 272 CLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--THVAPR-MF 328
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 329 KTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLEPKDANGRPDAVVAKEA 388
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD ++E
Sbjct: 389 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRIME 443
>gi|301764841|ref|XP_002917823.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11-like [Ailuropoda melanoleuca]
Length = 952
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ T K+ L K+ ++ +LP LI+++KRF+ F EK T+
Sbjct: 774 IELFTTVETLEKENPWYCPTCKQQQLATKKLDLWTLPETLIIHLKRFSYTKFSREKLDTL 833
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K + ES E YDL+A H G +G Y
Sbjct: 834 VEFPIRDLDFSEFV---IKPQNESAP--------ELYKYDLIAVSNHYGGLRDGHYTTFA 882
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 883 CNKDSGQWHYFDDNSVSPVTENQIESKAAYVLFYQ 917
>gi|164519045|ref|NP_035808.2| ubiquitin carboxyl-terminal hydrolase 4 [Mus musculus]
gi|342187118|sp|P35123.3|UBP4_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4; AltName:
Full=Ubiquitous nuclear protein
gi|26354498|dbj|BAC40877.1| unnamed protein product [Mus musculus]
gi|74140411|dbj|BAE42357.1| unnamed protein product [Mus musculus]
gi|74146936|dbj|BAE25450.1| unnamed protein product [Mus musculus]
gi|74199576|dbj|BAE41468.1| unnamed protein product [Mus musculus]
gi|74211684|dbj|BAE29198.1| unnamed protein product [Mus musculus]
gi|148689335|gb|EDL21282.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_b [Mus
musculus]
Length = 962
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + Y
Sbjct: 809 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSARPY------ 862
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + ++ GKWY D V+ I
Sbjct: 863 ---------VYDLIAVSNHYGAMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKA 913
Query: 318 AYIQIYELRTTPSPTAMSEG 337
AY+ Y+ R + S G
Sbjct: 914 AYVLFYQRRDDECSSTSSLG 933
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL +YFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--THVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLEPKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD ++E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRIME 490
>gi|2655204|gb|AAC53587.1| ubiquitin-specific protease [Mus musculus]
Length = 962
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + Y
Sbjct: 809 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSARPY------ 862
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + ++ GKWY D V+ I
Sbjct: 863 ---------VYDLIAVSNHYGAMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKA 913
Query: 318 AYIQIYELRTTPSPTAMSEG 337
AY+ Y+ R + S G
Sbjct: 914 AYVLFYQRRDDECSSTSSLG 933
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL +YFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--THVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLEPKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD ++E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRIME 490
>gi|198455403|ref|XP_001359977.2| GA19137, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198133229|gb|EAL29129.2| GA19137, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 901
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 133/315 (42%), Gaps = 61/315 (19%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
+++ L+++LWN + +K S L++VV + F+ +Q D +FL+ ++ LH
Sbjct: 610 VIEEVAALIKELWNGQ-YKCVASRD--LRSVVGQYQNIFRGVDQQDSHEFLTILMDWLHS 666
Query: 92 ALNG--------------------TKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQR 131
L TK K+S I+ F G MK + +
Sbjct: 667 DLQTLDVSRMRETIGAAEQAWLDFTKAKES-IILHLFYGQMKSTVKCVTC---------- 715
Query: 132 LLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKT 191
KE+ T F L+ +LPP +E N +++Y + + KT
Sbjct: 716 ------NKESATYECFSNLSLELPPNA---NECQLNQC--MDMYFSGERIQGWNCPNCKT 764
Query: 192 YKENFLKRFEITSLPPYLILYVKRF---TKNTFFVEKNPTIVNFPVKNVDFGDILTPEVK 248
K +K+ +I+ LPP L++++KRF T NT K ++FP++N++ ++P +
Sbjct: 765 -KRAAIKKLDISKLPPVLVVHLKRFYADTSNTGSYAKKQNFLSFPLQNLE----MSPYI- 818
Query: 249 AKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDI 308
A+ ES +A T Y L A H G G Y G+WY+ D V+ +
Sbjct: 819 ARAES------RAAKPKT-YQLYAVSNHYGTMEGGHYTAFCKSPNYGRWYKFDDQVVSTL 871
Query: 309 LPQMITLTEAYIQIY 323
+ + AYI Y
Sbjct: 872 DTSNVISSAAYILFY 886
>gi|195157880|ref|XP_002019822.1| GL12603 [Drosophila persimilis]
gi|194116413|gb|EDW38456.1| GL12603 [Drosophila persimilis]
Length = 901
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 133/315 (42%), Gaps = 61/315 (19%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
+++ L+++LWN + +K S L++VV + F+ +Q D +FL+ ++ LH
Sbjct: 610 VIEEVAALIKELWNGQ-YKCVASRD--LRSVVGQYQNIFRGVDQQDSHEFLTILMDWLHS 666
Query: 92 ALNG--------------------TKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQR 131
L TK K+S I+ F G MK + +
Sbjct: 667 DLQTLDVSRMRETIGAAEQAWLDFTKAKES-IILHLFYGQMKSTVKCVTC---------- 715
Query: 132 LLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKT 191
KE+ T F L+ +LPP +E N +++Y + + KT
Sbjct: 716 ------NKESATYECFSNLSLELPPNA---NECQLNQC--MDMYFSGERIQGWNCPNCKT 764
Query: 192 YKENFLKRFEITSLPPYLILYVKRF---TKNTFFVEKNPTIVNFPVKNVDFGDILTPEVK 248
K +K+ +I+ LPP L++++KRF T NT K ++FP++N++ ++P +
Sbjct: 765 -KRAAIKKLDISKLPPVLVVHLKRFYADTSNTGSYAKKQNFLSFPLQNLE----MSPYI- 818
Query: 249 AKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDI 308
A+ ES +A T Y L A H G G Y G+WY+ D V+ +
Sbjct: 819 ARAES------RAAKPKT-YQLYAVSNHYGTMEGGHYTAFCKSPNYGRWYKFDDQVVSTL 871
Query: 309 LPQMITLTEAYIQIY 323
+ + AYI Y
Sbjct: 872 DTSNVISSAAYILFY 886
>gi|10720326|sp|O57429.1|UBP2_CHICK RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|2736064|gb|AAC13729.1| ubiquitin specific protease 41 [Gallus gallus]
Length = 357
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 135/358 (37%), Gaps = 66/358 (18%)
Query: 1 ALCHVTPLRDY-----FLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
L + LRDY +LR++N R L+ F +L++ LW S VSP
Sbjct: 36 CLSNTKELRDYCLQNQYLRDLNNNSRMRTA------LMSEFAKLIQLLWTSSPNDS-VSP 88
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVK 115
E + ++ + + +Q D +FL + L+ LH +N L +
Sbjct: 89 SEFKTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHGEVN------------RVLVRPRAN 135
Query: 116 TRKIPPVELEEKVRQRLLLTEEYKETETESPFL-----YLTCD----------------L 154
+ + +EK RQ +E +++ F+ LTC L
Sbjct: 136 ADTLDHLPDDEKSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDPFWDLSL 195
Query: 155 PPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKEN--FLKRFEITSLPPYLILY 212
P P EV ++ + L+T + + + K K+F I P L+L+
Sbjct: 196 PIPKKGYGEV--TLMDCLRLFTKEDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLH 253
Query: 213 VKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVA 272
+KRF++ K T VNFP+K++D + + +Y+L A
Sbjct: 254 LKRFSEARIRASKLTTFVNFPLKDLD----------------LREFASQSCNHAVYNLYA 297
Query: 273 NIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
H G G Y + +W+ D VT + + ++AY+ YEL + S
Sbjct: 298 VSNHSGTTMGGHYTAYCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLFYELASPSS 355
>gi|351698262|gb|EHB01181.1| Ubiquitin carboxyl-terminal hydrolase 3 [Heterocephalus glaber]
Length = 537
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 131/323 (40%), Gaps = 56/323 (17%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDFLSWFLNTLH 90
LV+ F + + LW + ++ SP + V+W F+ +Q D +F+ + L+ LH
Sbjct: 228 LVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 283
Query: 91 RALNGT-----------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYK 139
L G + S K + I L+ +V + TE K
Sbjct: 284 LELQGGFNGVSRSAMLQENSSLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRK 343
Query: 140 ETETESPFLYLTCDLPPPPLFKDEVLEN--------IIPQVNLYT-ILTKFNNESE-KEY 189
PFL L+ D+P F+ + +N + Q+ L + L F + E E
Sbjct: 344 F----DPFLDLSLDIPSQ--FRSKRSKNQENGPVCSLRAQITLVSDCLRSFTDLEELDET 397
Query: 190 KTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD- 241
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 398 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 457
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEI 300
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 458 LLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYAVHE--GRWFHF 502
Query: 301 QDLHVTDILPQMITLTEAYIQIY 323
D VT + + +AYI Y
Sbjct: 503 NDSTVTLTDEETVGKAKAYILFY 525
>gi|297613547|ref|NP_001067298.2| Os12g0621000 [Oryza sativa Japonica Group]
gi|255670491|dbj|BAF30317.2| Os12g0621000 [Oryza sativa Japonica Group]
Length = 864
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 14/126 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+ ++ LP LI+++KRF+ + + K T V+FPV ++D +KY +
Sbjct: 729 KKLDLWRLPEILIIHLKRFSYSRYTKNKLETCVDFPVHDLDL---------SKYIGS--- 776
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+ + S Y L A H G G Y ++YH+G WY+ D HV I + I +
Sbjct: 777 --RGQQISNHYRLYAISNHYGSMGGGHYTAYVYHEGKKGWYDFDDRHVGPISEESIKTSA 834
Query: 318 AYIQIY 323
AY+ Y
Sbjct: 835 AYVLFY 840
>gi|154415994|ref|XP_001581020.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121915244|gb|EAY20034.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 425
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 129/326 (39%), Gaps = 59/326 (18%)
Query: 5 VTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVL 64
+TPLRD+ L S L ++ +NP F+ H+SP +L+++
Sbjct: 154 ITPLRDFLLLN-----------PQSTPLANELSRYFKQAFNPYGFRDHISPFTLLRSIQT 202
Query: 65 WSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVEL 124
S ++ + +P+++ ++ L L++ + G IV K G +
Sbjct: 203 LSNDKYNVQNEVNPVEYFTFILQLLNQEIPG------KIVSKLICGKLNFVEDNNGDCNY 256
Query: 125 EEKVRQRLLLTEEYKETETESPFLYLTCDLPP--PPLFKDEV-LENIIPQVNLYTILTKF 181
K+ Y + L P PL+++ + E IIPQ L ++L ++
Sbjct: 257 TSKIIN------------------YWSIPLEPYECPLYRNGLEKEKIIPQATLESLLERY 298
Query: 182 NNESEKEYKTYKENFLKR-FEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG 240
N ++R I +L + V R +F +EK +N + + D G
Sbjct: 299 NGTQITVKSIGNRQIVQRKMSIHKSSEFLWINVNRIRPASFGLEK----LNLHIVHSDDG 354
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEI 300
I DL K + YDLV+ I H+G+ ++G Y V+ G W +
Sbjct: 355 SI--------------DLSKYGVNAK-YDLVSVISHEGDVNSGVY-VNYCKNEAGVWLKC 398
Query: 301 QDLHVTDILPQMITLTEAYIQIYELR 326
+ VT+ + Q+ ++ +Y+ R
Sbjct: 399 GNSDVTNSMFQVAATSQCCHLLYQRR 424
>gi|74142121|dbj|BAE41120.1| unnamed protein product [Mus musculus]
Length = 962
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + Y
Sbjct: 809 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSARPY------ 862
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + ++ GKWY D V+ I
Sbjct: 863 ---------VYDLIAVSNHYGAMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKA 913
Query: 318 AYIQIYELRTTPSPTAMSEG 337
AY+ Y+ R + S G
Sbjct: 914 AYVLFYQRRDDECSSTSSLG 933
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL +YFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--THVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLEPKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD ++E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRIME 490
>gi|348581460|ref|XP_003476495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Cavia
porcellus]
Length = 932
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV+ ++ + + Y
Sbjct: 778 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDPSAQPY------ 831
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 832 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKFSGKWYYFDDSNVSLASEDQIVTKA 882
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 883 AYVLFYQRR 891
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 287 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 343
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK------KDSS-----IVYKTF 108
+ V QF +Q D + L++ L+ LH LN KK KD++ +V K
Sbjct: 344 KTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLLPKDANGRPDVVVAKEA 403
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V++
Sbjct: 404 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVMD 458
>gi|297709837|ref|XP_002831614.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Pongo abelii]
Length = 934
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 30/209 (14%)
Query: 138 YKETETESPFLYLTCD---LPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKE 194
Y E E E + TC + P+ E +E L+T + E+ + K+
Sbjct: 725 YDEVEAEGYVKHDTCVGYVMKKAPVRLQECIE-------LFTTVETLEKENPWYCPSCKQ 777
Query: 195 NFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKY 251
+ L K+ ++ LP LI+++KRF+ F EK T+V FP++++DF + ++ P+ +
Sbjct: 778 HQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFVIQPQNDSNP 837
Query: 252 ESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQ 311
E YDL+ V+N H G +G Y KG G+W+ D VT +
Sbjct: 838 ELYKYDLIA----------VSN--HYGGMRDGHYTTFACFKGSGQWHYFDDNSVTAVNEN 885
Query: 312 MI-TLTEAYIQIYE----LRTTPSPTAMS 335
I L AY+ Y+ R SPT S
Sbjct: 886 QIEVLKAAYVLFYQRQDVARRLLSPTGSS 914
>gi|326675880|ref|XP_693811.5| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Danio rerio]
Length = 1067
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 136/362 (37%), Gaps = 88/362 (24%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLW-------NPRN 48
LC+ + DYF R +IN A + G+ + + F +M+ LW +P +
Sbjct: 752 CLCNTVAMADYFNRNYYQDDINRANILGHKGE----VAEEFSVVMKALWLGQYKMISPLD 807
Query: 49 FKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK--------- 99
FK + +F E D + L + ++ LH LN K+
Sbjct: 808 FK----------GTICKINSRFSSYEHQDSQELLLFLMDGLHEDLNKADKRRGYKEEEIE 857
Query: 100 ------------------DSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKET 141
+ SI+ F G K + ++ ++K
Sbjct: 858 HLDDVSAADLAWSKHKQLNESIIVALFQGQFKSTVQ---------------CMSCQHKSR 902
Query: 142 ETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFE 201
E+ F+YLT ++ L++ + + LT N + KT++ + +KR +
Sbjct: 903 TFET-FMYLTLEMT---ASSKCSLQDCLKLFHKEERLTDGNRFYCRHCKTHR-DAIKRMQ 957
Query: 202 ITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKA 261
I LPP L++++KRF + EK T+V+FP+ N+D ++
Sbjct: 958 IWKLPPILLVHLKRFKYEGRWREKLQTLVDFPLDNLDLSQY---------------VIGP 1002
Query: 262 KYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQ 321
K Y+L A H G G Y + + +W++ D V++I + AYI
Sbjct: 1003 KNNLKKYNLYAVSNHYGGMDGGHYTAYCKNPMKQRWFKFDDHEVSEISSSTVRSPAAYIF 1062
Query: 322 IY 323
Y
Sbjct: 1063 FY 1064
>gi|392346694|ref|XP_003749615.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50
[Rattus norvegicus]
Length = 385
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 130/342 (38%), Gaps = 44/342 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
LC +PL +YFL +++ + + F LM +W VSP L
Sbjct: 57 CLCSTSPLVEYFLSGKYITALQKDCSE----VTTAFAYLMTDMW--LGDSDCVSPEIFLS 110
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV + T+Q D +FL + LN LH AL + +S + + RK+P
Sbjct: 111 AVGSLYPAFLKKTQQ-DAQEFLIYVLNELHEALKKHCRGRASEK-----RTAQNCCRKVP 164
Query: 121 PVELEEKVRQRLL-------LTEEYKETETESPFLYLTCDLPPPPLFK---DEVLENIIP 170
E + RL +T ET T ++ LP P ++ + L+
Sbjct: 165 --AHETSIITRLFEGQLSYSITCLKCETCTYKNEVFTILSLPIPSEYECSLQDCLQCFFQ 222
Query: 171 QVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIV 230
Q L +NN+ + K+ R I+ P ++L++KRF +K T +
Sbjct: 223 QDTL-----TWNNQIHCSFCEIKQETAVRTTISKAPKIIVLHLKRFDIQGAVKKKLRTDI 277
Query: 231 NFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLY 290
++P+ N+D + P + + Y+L A + H G+ G Y
Sbjct: 278 HYPLTNLDLTPYICPVFR---------------KHPKYNLCAVVNHFGDLDGGHYTAFCK 322
Query: 291 HKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
+ WY D V++I + AY+ Y + PT
Sbjct: 323 NSVTQAWYSFDDTRVSEIPDTSVQTATAYLLFYSCQPFSIPT 364
>gi|195999830|ref|XP_002109783.1| hypothetical protein TRIADDRAFT_53019 [Trichoplax adhaerens]
gi|190587907|gb|EDV27949.1| hypothetical protein TRIADDRAFT_53019 [Trichoplax adhaerens]
Length = 921
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Query: 193 KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKY 251
+ K + +LP +I+++KRF + K IV+FP+ +D D I P+ +
Sbjct: 657 QRGITKTLSMWTLPEVMIVHLKRFKQIGAHFTKLHDIVSFPIVGLDMSDFIGRPDSDDMH 716
Query: 252 ESTMYDLVKA-KYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILP 310
Y + +++S++YDL A H G +G Y + G+WY D V ++
Sbjct: 717 SYGSYRNQRDFRHQSSIYDLYAVCNHHGNMGSGHYTACCRNPSNGRWYSFDDARVEEVSS 776
Query: 311 QMITLTEAYIQIYELRTTPS 330
I +AYI Y RT +
Sbjct: 777 DFIVTNDAYILFYAQRTVGA 796
>gi|50510751|dbj|BAD32361.1| mKIAA1003 protein [Mus musculus]
Length = 961
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 615 NGVKYCKVLCLPEILCVHLKRFRHEVMYSFKVSSHVSFPLEGLDLRPFLAKECTSQV--- 671
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 672 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 720
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 721 NVEAYVLFY 729
>gi|350579707|ref|XP_001929239.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Sus
scrofa]
Length = 914
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 568 NGVKYCKVLQLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPFLAKECTSQI--- 624
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 625 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETLVQ 673
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 674 NAEAYVLFY 682
>gi|3800762|gb|AAC68864.1| ubiquitin specific protease 52 [Gallus gallus]
Length = 465
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 135/358 (37%), Gaps = 66/358 (18%)
Query: 1 ALCHVTPLRDY-----FLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
L + LRDY +LR++N R L+ F +L++ LW S VSP
Sbjct: 144 CLSNTKELRDYCLQNQYLRDLNNNSRMRTA------LMSEFAKLIQLLWTSSPNHS-VSP 196
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVK 115
E + ++ + + +Q D +FL + L+ LH +N L +
Sbjct: 197 SEFKTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHGEVN------------RVLVRPRAN 243
Query: 116 TRKIPPVELEEKVRQRLLLTEEYKETETESPFLY-----LTCD----------------L 154
+ + +EK RQ +E +++ F+ LTC L
Sbjct: 244 ADTLDHLPDDEKSRQMWRRYQEREDSRVSDLFVAQLKSSLTCSECGYCSTAFDPFWDLSL 303
Query: 155 PPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKEN--FLKRFEITSLPPYLILY 212
P P EV ++ + L+T + + + K K+F I P L+L+
Sbjct: 304 PIPKKGYGEV--TLMDCLRLFTKEDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLH 361
Query: 213 VKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVA 272
+KRF++ K T VNFP+K++D + + +Y+L A
Sbjct: 362 LKRFSEARIRASKLTTFVNFPLKDLD----------------LREFASQSCNHAVYNLYA 405
Query: 273 NIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
H G G Y + +W+ D VT + + ++AY+ Y+L + S
Sbjct: 406 VSNHSGATMGGHYTAYCKSPISSEWHSFNDSRVTPMSSSHVPTSDAYLLFYDLASPSS 463
>gi|11414862|dbj|BAB18534.1| deubiquitinating enzyme UBPY [Mus musculus]
Length = 1080
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 150/345 (43%), Gaps = 54/345 (15%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 756 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 809
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT------KKKDSSIVYKTFL 109
+ + + QF + Q D + L ++ LH LN K++++ + +
Sbjct: 810 KD-FKVTIGKINDQFAGSSQQDSQELLLSLMDGLHEDLNKADNRKRHKEENNEHLDEPAG 868
Query: 110 GSMKVKTRKIPPVELEEKVRQRLLLTEEYKET----------ETESPFLYLTCDLPPPPL 159
G +++ K +L E + RLL ++K T T F+YL+ LP
Sbjct: 869 GRARLQKHK----QLNESI-IRLLFQGQFKATVQCLTCRRRSRTFEAFMYLS--LPLAST 921
Query: 160 FKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKN 219
K L++ + + LT NN + + + LK+ EI LPP L++++KRF+ +
Sbjct: 922 SKC-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYD 979
Query: 220 TFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG 278
+ +K T V+FP++N+D ++ P+ K Y+L + H G
Sbjct: 980 GRWKQKLQTSVDFPLENLDLSQYVIGPKNSLK----------------KYNLFSVSNHYG 1023
Query: 279 EPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + +W++ D V+DI + + AYI Y
Sbjct: 1024 GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068
>gi|410919483|ref|XP_003973214.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Takifugu
rubripes]
Length = 1001
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N + +K T+V+FP+++++ + + + Y
Sbjct: 860 KKFDLWSLPRILVVHLKRFSYNRCWRDKLDTVVDFPIRDLNMSEFVCDPKASPY------ 913
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D V+ I
Sbjct: 914 ---------IYDLIAVSNHYGGMGGGHYTAYGKNKADGKWYYFDDSSVSSASEDQIVTKA 964
Query: 318 AYIQIYELRTTPSPT 332
AY+ Y+ R SP+
Sbjct: 965 AYVLFYQRRDEESPS 979
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + +PL +YFL + A + R P + + + +L++++W R+ S+V+P
Sbjct: 337 CLSNASPLTEYFLNDQYEAEINRENPLGMRGEIAEAYADLVKQMWLSRS--SYVAPRSFK 394
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
V ++ QF +Q D + L++ L+ LH LN KKK IV K
Sbjct: 395 TQVGRFA-PQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLALRDAEGRPDEIVAKEA 453
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ I + L+ E K + T PF YLT P P+ KD LE
Sbjct: 454 WTNHRLRNDSIIVDIFHGLFKSTLVCPECSKVSVTFDPFCYLTL---PLPMKKDRTLE 508
>gi|355727928|gb|AES09357.1| ubiquitin specific peptidase 2 [Mustela putorius furo]
Length = 217
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 197 LKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMY 256
+K+F I P L+L++KRF+++ K T VNFP++++D + + E+T +
Sbjct: 99 IKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFAS-------ENTNH 151
Query: 257 DLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLT 316
+Y+L A H G G Y + G+W+ D VT + + +
Sbjct: 152 ---------AVYNLYAVSNHSGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTS 202
Query: 317 EAYIQIYELRTTPS 330
+AY+ YEL + PS
Sbjct: 203 DAYLLFYELASPPS 216
>gi|195435249|ref|XP_002065614.1| GK14576 [Drosophila willistoni]
gi|194161699|gb|EDW76600.1| GK14576 [Drosophila willistoni]
Length = 318
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 127/324 (39%), Gaps = 62/324 (19%)
Query: 26 GDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTE--QSDPIDFLS 83
G+ ++ F +L+ ++W N +S V+P E+ +A +SRK F++ Q D +FL
Sbjct: 29 GNKDQQILHEFAKLISEMWTA-NVRS-VAPMELKRA---FSRKHRMFSDFNQQDAQEFLR 83
Query: 84 WFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKET-- 141
+FL++LH ALN T K ++ + K E R L + K T
Sbjct: 84 FFLDSLHLALN-TGSKGGTLYIDDKVSDNKKADLMWNWYSSHENSLIRDLFVGQLKSTLK 142
Query: 142 --------ETESPFLYLTCDLPPPP-----------LFKDEVLE-NIIPQVNLYTILTKF 181
T PF L+ LP K+EVL+ N +P +
Sbjct: 143 CSTCGNTSVTFDPFWDLSVPLPLSSTRCKLDTCLNLFIKEEVLDGNDMPNCS-------- 194
Query: 182 NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD 241
+ K+ K ++RF P YL++++KRF+ F K +V FP
Sbjct: 195 --RCQARRKSTKSFTIQRF-----PKYLVIHLKRFSGTRF--SKLSHLVEFPT------- 238
Query: 242 ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQ 301
+ E M S Y L A H G G Y H KW+E
Sbjct: 239 -------SARELDMGSYGSNSNSSAQYSLYAISNHMGSTGGGHYVALCKHPISHKWHEFN 291
Query: 302 DLHVTDILPQMITLT-EAYIQIYE 324
D V+D LP+ ++ AYI YE
Sbjct: 292 DNIVSDALPESFLVSPSAYILFYE 315
>gi|13529494|gb|AAH05470.1| Ubiquitin specific peptidase 11 [Mus musculus]
Length = 699
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ + EK T+
Sbjct: 522 IKLFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKISREKLDTL 581
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K K ES+ DL K YDL+A H G +G Y
Sbjct: 582 VQFPIRDLDFSEFV---IKPKNESSP-DLYK-------YDLIAVSNHYGGMRDGHYTTFA 630
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ + D V+ + I AY+ Y+
Sbjct: 631 CNKDSGQWHYLDDNSVSPVNENQIESKAAYVLFYQ 665
>gi|30794162|ref|NP_083122.1| ubiquitin carboxyl-terminal hydrolase 20 [Mus musculus]
gi|81876818|sp|Q8C6M1.1|UBP20_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20; AltName:
Full=VHL-interacting deubiquitinating enzyme 2
gi|26344117|dbj|BAC35715.1| unnamed protein product [Mus musculus]
gi|50927529|gb|AAH79674.1| Ubiquitin specific peptidase 20 [Mus musculus]
gi|74201201|dbj|BAE37447.1| unnamed protein product [Mus musculus]
gi|148676553|gb|EDL08500.1| ubiquitin specific peptidase 20 [Mus musculus]
Length = 916
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 570 NGVKYCKVLCLPEILCVHLKRFRHEVMYSFKVSSHVSFPLEGLDLRPFLAKECTSQV--- 626
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 627 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 675
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 676 NVEAYVLFY 684
>gi|444514644|gb|ELV10629.1| Putative ubiquitin carboxyl-terminal hydrolase 50 [Tupaia
chinensis]
Length = 373
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 125/337 (37%), Gaps = 34/337 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
LC ++PL +YFL +++ + + F LM +W VSP E+ +
Sbjct: 61 CLCSISPLVEYFLSGKYMTALQKDCSE----VATAFAYLMTDMW--LGDSDCVSP-EIFR 113
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+ + +F Q D +FL + LN LH AL +K S T KV +
Sbjct: 114 SALGNLYPEFMKKTQQDAQEFLIYVLNELHEALKTYHRKRSYEKRSTQQCCRKVIASETS 173
Query: 121 PVE--LEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK---DEVLENIIPQVNLY 175
+ E ++R ++ + F L+ LP P ++ + L+ Q L
Sbjct: 174 IITQLFEGQLRYDIVCLKCDNCAHKNEVFSILS--LPIPSDYECSLQDCLQCFFQQDTL- 230
Query: 176 TILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVK 235
+NN+ + R I+ P +I ++KRF K T +++P+
Sbjct: 231 ----TWNNQMHCSLCDTMQETAVRASISKAPKVVIFHLKRFDIQGMTKRKLRTDIHYPLT 286
Query: 236 NVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIG 295
N+D + P + + Y L A + H G+ G Y +
Sbjct: 287 NLDLTPYICPVAR---------------KHPKYSLCAVVNHFGDLDGGHYTAFCKNSVTQ 331
Query: 296 KWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
WY D V++I + AY+ Y + PT
Sbjct: 332 AWYSFDDTRVSEIPDSSVQTATAYLLFYSCQPLSIPT 368
>gi|449662479|ref|XP_002167244.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Hydra
magnipapillata]
Length = 503
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 128/305 (41%), Gaps = 41/305 (13%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
LV+ +++ LW + + +SP E L VV +F+ +Q D +F+ L+ +H
Sbjct: 209 LVEELRKVLCALWQ-QGSNTAISP-ESLFTVVWKVVPRFRGYQQHDAHEFMHCLLDRVHN 266
Query: 92 ALNGTKK---KDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFL 148
L +K+ +I+ F G ++ + + +K E Y++
Sbjct: 267 ELLTSKRFTNGCDTIISGIFGGQLQSDVTCLTCGTISKK-------QEAYRD-------- 311
Query: 149 YLTCDLPPPPLFKDEVLENIIPQ-VNLYTILTKFN-----NESE---KEYKTYKENFLKR 199
L+ D+P P K + P L L F +ESE E K+ K+
Sbjct: 312 -LSLDIPFKPKLKTSPGKKKTPSACQLIDCLQSFVEMETLDESEWYMCEKCNKKQPSTKK 370
Query: 200 FEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLV 259
F I LP L L++KRF + K T V FP+K ++ + P + + T +
Sbjct: 371 FWILRLPNVLCLHLKRFRYSPLARTKVDTFVRFPIKELN----MDPFILKTNQKTNRMSI 426
Query: 260 KAKYESTMYDLVANIVHDGEPS-NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEA 318
KA +YDL A +VH G + +G Y + H+ G WY D V+ + I +A
Sbjct: 427 KAH----LYDLAACVVHHGSGAGSGHYTTYARHE--GSWYNFNDSSVSLTNEESIQHCKA 480
Query: 319 YIQIY 323
YI Y
Sbjct: 481 YILFY 485
>gi|326927732|ref|XP_003210044.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Meleagris
gallopavo]
Length = 917
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 20/139 (14%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ + ++ +K T+V FP++ ++ + + + Y
Sbjct: 783 KKFDLWSLPKILVVHLKRFSYSRYWRDKLDTVVEFPIRGLNMSEFVCDPRGSSY------ 836
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D V+ I
Sbjct: 837 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKVNGKWYYFDDSSVSLASEDQIVTKA 887
Query: 318 AYIQIYELRTT-----PSP 331
AY+ Y+ R + PSP
Sbjct: 888 AYVLFYQRRNSEEHVAPSP 906
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 26/182 (14%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
L + PL DYFL EIN++ G+ + + + EL++++W+ R +SHV+P
Sbjct: 297 CLSNTPPLTDYFLEDKYEAEINHSNPLGMRGE----IAEAYAELIKQIWSGR--QSHVAP 350
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIV 104
M + V QF +Q D + L++ L+ LH LN KKK S+V
Sbjct: 351 R-MFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSVV 409
Query: 105 YKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEV 164
K + +++ I + L+ + K + T PF YLT P PL +D +
Sbjct: 410 AKEAWENHRLRNDSIIVDIFHGLFKSTLVCPKCSKVSVTFDPFCYLTL---PLPLKRDRL 466
Query: 165 LE 166
LE
Sbjct: 467 LE 468
>gi|357604445|gb|EHJ64192.1| putative ubiquitin specific protease 41 [Danaus plexippus]
Length = 913
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 126/317 (39%), Gaps = 51/317 (16%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
L++ F ++++LW + V+ + V ++ + +++Q D +FL + L LH
Sbjct: 627 LIKAFASVIKELWRSGDRDCVVNTTALKSQVQRFAPRFMGYSQQ-DAQEFLRYLLEGLHE 685
Query: 92 ALNGTKKK-------------DSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEY 138
+N K DS+ + + ++ + ++ + + + ++ L T
Sbjct: 686 DVNRVTVKPKPILTEIDDSLSDSAKAAEAWSRYLRTEDSRVGDIFVGQ-LKSTLRCTHCL 744
Query: 139 KETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYK-------- 190
++ T PF L+ +P + + L L F E E +
Sbjct: 745 HDSVTFDPFWDLSLPIP-----------SRTGNLKLQQCLQHFVREEELDGDEKPTCSKC 793
Query: 191 TYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAK 250
+ LK F + P L+L++KRF+ F K +V FP+ +D ++P +
Sbjct: 794 GVRRKCLKWFTVHKFPQVLVLHLKRFSPTERFRGKLSVVVEFPLSGLD----MSPFAASP 849
Query: 251 YESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILP 310
+T Y+L A H G +G Y + H G W+E D VT I
Sbjct: 850 THAT-------------YNLYAVSNHSGTTYSGHYTAYCKHPYTGDWHEYNDSRVTPIRS 896
Query: 311 QMITLTEAYIQIYELRT 327
+ I EAY+ YEL T
Sbjct: 897 RDIVSAEAYVLFYELAT 913
>gi|195569249|ref|XP_002102623.1| GD19401 [Drosophila simulans]
gi|194198550|gb|EDX12126.1| GD19401 [Drosophila simulans]
Length = 896
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 129/316 (40%), Gaps = 63/316 (19%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
+++ L+++LWN + +K S L+ VV +K F+ +Q D +FL+ ++ LH
Sbjct: 610 VIEEVAALIKELWNGQ-YKCVASRD--LRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHS 666
Query: 92 ALNG--------------------TKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQR 131
L TK K+S I++ F G MK + +
Sbjct: 667 DLQTLHVPRQREMISASEKAWLEFTKAKESMILH-LFYGQMKSTVKCVAC---------- 715
Query: 132 LLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKT 191
+KE+ T F L+ +LPP + + + +++Y + + + KT
Sbjct: 716 ------HKESATYESFSNLSLELPP-----NSNVCQLNQCMDMYFSGERIHGWNCPSCKT 764
Query: 192 YKENFLKRFEITSLPPYLILYVKRF---TKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEV 247
K + +K+ +I+ LPP L++++KRF N+ K + FP++N+D I E
Sbjct: 765 -KRDAIKKLDISKLPPVLVVHLKRFYADPSNSGAYMKKQNYLRFPLENLDMNPYIARAES 823
Query: 248 KAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTD 307
+A T Y L A H G G Y GKW++ D V+
Sbjct: 824 RAVTPKT-------------YQLYAVSNHYGTMEGGHYTAFCKSANYGKWFKFDDQVVSA 870
Query: 308 ILPQMITLTEAYIQIY 323
+ + + AYI Y
Sbjct: 871 LDSSNVVSSAAYILFY 886
>gi|23208620|gb|AAN15803.1|AF449715_1 pVHL-interacting deubiquitinating enzyme 2 [Mus musculus]
Length = 916
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 570 NGVKYCKVLCLPEILCVHLKRFRHEVMYSFKVSSHVSFPLEGLDLRPFLAKECTSQV--- 626
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 627 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 675
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 676 NVEAYVLFY 684
>gi|296216400|ref|XP_002754520.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Callithrix
jacchus]
Length = 597
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 18/136 (13%)
Query: 197 LKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMY 256
+K+F I P L+L++KRF+++ K T VNFP++++D + + E+T +
Sbjct: 476 IKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLREFAS-------ENTNH 528
Query: 257 DLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHK--GIGKWYEIQDLHVTDILPQMIT 314
+Y+L A H G G Y + + G G+W+ D VT + +
Sbjct: 529 ---------AVYNLYAVSNHSGTTMGGHYTAYSNCRSPGTGEWHTFNDSSVTPMSSSQVR 579
Query: 315 LTEAYIQIYELRTTPS 330
++AY+ YEL + PS
Sbjct: 580 TSDAYLLFYELASPPS 595
>gi|167518329|ref|XP_001743505.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778604|gb|EDQ92219.1| predicted protein [Monosiga brevicollis MX1]
Length = 328
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 107/272 (39%), Gaps = 41/272 (15%)
Query: 69 QFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTF---LGSMKV------KTRKI 119
QF+ T+Q D +F S+FL+ LH LN +KK L + K + I
Sbjct: 73 QFEGTQQQDAQEFASFFLDGLHEDLNRVRKKVCDCNLDGMPDHLAADKAWNEYLTRHNSI 132
Query: 120 PPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILT 179
+ + R + E+ SPF++LT LP P P V++ L
Sbjct: 133 IVDLFQGQYRSAMRCLTCGHESLNFSPFMFLT--LPIP----------ANPSVDIRACLQ 180
Query: 180 KF-NNESEKEYKTYK----ENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPV 234
+F E ++ K + K I LPP L++++KRFT + F +K T V+FP+
Sbjct: 181 EFVRAERVNGWRCPKCKCARDASKTLSIWRLPPLLMIHLKRFTFSGPFRDKLSTRVDFPL 240
Query: 235 KNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKG 293
N+ D + P+++ + Y L H G S G Y
Sbjct: 241 TNLKIQDGVANPKLQEQKRD--------------YKLFGVSNHYGNMSGGHYIAFCRDFQ 286
Query: 294 IGKWYEIQDLHVTDILPQMITLTEAYIQIYEL 325
+WY+ D V+ + + AY+ Y
Sbjct: 287 SRRWYKFDDSAVSPMPESQVCSNAAYLLFYSC 318
>gi|157821617|ref|NP_001101297.1| ubiquitin carboxyl-terminal hydrolase 20 [Rattus norvegicus]
gi|149039064|gb|EDL93284.1| ubiquitin specific protease 20 (predicted) [Rattus norvegicus]
Length = 915
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 569 NGVKYCKVLCLPEILCVHLKRFRHEVMYSFKVSSHVSFPLEGLDLRPFLAKECTSQV--- 625
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 626 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 674
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 675 NVEAYVLFY 683
>gi|440799459|gb|ELR20504.1| ubiquitin specific protease 44 isoform 2, putative [Acanthamoeba
castellanii str. Neff]
Length = 549
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 118/314 (37%), Gaps = 67/314 (21%)
Query: 39 LMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDFLSWFLNTLHRAL---- 93
+ R +W+ R + V+P +L A LW +F+ +Q D +FL + L+ LH L
Sbjct: 93 IFRVVWSGR--WAVVTPFALLDA--LWKFVPRFRNYQQQDAQEFLVYLLDKLHDELTSLN 148
Query: 94 ---------NGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETE 144
+G K++ SI+ KTF G EL +V + +
Sbjct: 149 GGREVVASPSGQKRQGESIISKTFNG------------ELLSQV----TCSACGNVSSRR 192
Query: 145 SPFLYLTCDLPPPPLFKDEVLENI----IPQVNLYTILTKFN-NESEKEYKTYK----EN 195
P+L L D+P +P +LY L F E Y K ++
Sbjct: 193 EPYLDLLLDIPIQHAGGSRSTRGNRKTNVPSCSLYDCLDSFTWPEKLTGYYCEKCKSNQD 252
Query: 196 FLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTM 255
KR I +LP RF T K T V FP+ +D + E
Sbjct: 253 ASKRLAIQTLP-------DRFCWTTTSRAKVDTKVLFPLIGLDLSAFCSEE--------- 296
Query: 256 YDLVKAKYESTMYDLVANIVHDGE-PSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
E+ ++DL + ++H G PS G Y YH G W D V+ PQ
Sbjct: 297 -------RENAIFDLSSVVIHHGSGPSAGHYTAFCYHTEQGTWLHFNDCRVSVSSPQEAA 349
Query: 315 LTEAYIQIYELRTT 328
+AY+ Y+ R+
Sbjct: 350 SAQAYMLFYQRRSA 363
>gi|238878183|gb|EEQ41821.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 242
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 25/128 (19%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L H+ P+R+Y+L E P + L G L+RK+W+P FKSH++PHE +
Sbjct: 140 VLAHIEPVRNYYLLET--------PTNP---LNVHLGLLIRKMWSPHLFKSHIAPHEFMN 188
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+V S+K+F E+ P FL W LN Y+ G ++V + I
Sbjct: 189 SVTEESKKRFTL-EKGHPKSFLLWLLN-------------RGGPYECLRGKVEVTSTPIV 234
Query: 121 PVELEEKV 128
P E ++KV
Sbjct: 235 PHEGKDKV 242
>gi|406698097|gb|EKD01342.1| ubiquitin-specific protease [Trichosporon asahii var. asahii CBS
8904]
Length = 1243
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 91/347 (26%), Positives = 140/347 (40%), Gaps = 50/347 (14%)
Query: 8 LRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSR 67
L ++ +E+N G+ L F EL+ LW + + +SP Q ++ +
Sbjct: 912 LDGHYKKEVNLTNTLGTRGN----LAHAFAELLSALW--KEHYTFLSPITFRQKSIINFK 965
Query: 68 KQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEK 127
F TEQ D +FLS+ ++ LH LN + K + + + +PP +K
Sbjct: 966 SDFAGTEQHDSQEFLSFVMDGLHEDLNRVRVKPKPV---EMTPQREAELETLPPQIASDK 1022
Query: 128 ----VRQR-------LLLTEEYKETETESPFLYLTCDLPP-------PPLFKDEVLENII 169
+QR + + E + +LT DLP P LF V I+
Sbjct: 1023 EWAIYKQRNDSFIVDVFQGQYMNRMECLTCHKWLTLDLPTSRKPIVLPELFDRYVQPEIL 1082
Query: 170 ------PQV-NLYTILT-KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRF--TKN 219
P++ L LT +F +K + K I LPP L++ +KRF
Sbjct: 1083 DGDDKCPKLRQLRPKLTYRFCPRCKKNRRASKT-----MTIVRLPPVLMIQLKRFLPVNG 1137
Query: 220 TFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYE--STMYDLVANIVHD 277
F +K+ T V FP+KN+D LT V + + DL + + YDL A H
Sbjct: 1138 GQFWDKSDTPVIFPLKNLD----LTRYVPVRQPNGTEDLDDPRTQIGPFKYDLYAVSNHM 1193
Query: 278 GEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
G S+G Y + KG W +D VT Q + AYI Y+
Sbjct: 1194 GTLSSGHYTA--FVKGSDHWSFCEDSRVTPATEQDVVNRPAYILFYK 1238
>gi|313234636|emb|CBY10591.1| unnamed protein product [Oikopleura dioica]
Length = 482
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 142/346 (41%), Gaps = 61/346 (17%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
AL H LRDYFL E + R P + S +V F ++ ++ ++ N + ++P+ +L
Sbjct: 176 ALTHSPVLRDYFLME-KHPRCS--PSEISSCIVCEFSQIFQEFFSNEN-SNPMTPYRLL- 230
Query: 61 AVVLWSRKQFQFT-EQSDPIDFLSWFLNTLHR---------ALNGTKKKDSSIVYKTFLG 110
+++W ++ EQ D +FL L+ +H +++ T + SI+ + F G
Sbjct: 231 -LLVWRNSEYLAGYEQQDAHEFLIAVLDMIHERLQPRIEGGSIDLTGHAERSIIDQVFTG 289
Query: 111 SMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIP 170
M+ ++ + ++T P ++ D+P +P
Sbjct: 290 YMQ----------------SNVVCNQCGNISQTIDPLRDISLDIPQ------------VP 321
Query: 171 QVNLYTILTKF------NNESEKEYKTY--KENFLKRFEITSLPPYLILYVKRFTKN-TF 221
+L L+KF N S+ K ++ K+ I+ LP L++KRF + T
Sbjct: 322 SASLMDCLSKFTKKEQLGNASKINCKKCGKRQESSKQLTISRLPVVACLHLKRFEQTATG 381
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
K T V+FP K +D G ++ D KYE L A + H G
Sbjct: 382 SRSKVATPVSFP-KTLDMGPFMSSARNTSLSPEFCDSAHYKYE-----LFAVVNHMGNLQ 435
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRT 327
+G Y + + W+ D +T + + +EAY+ Y ++
Sbjct: 436 SGHYTSFI--RQTSSWFRCDDSLITKASIEQVLNSEAYLLFYHKKS 479
>gi|431913420|gb|ELK15095.1| Ubiquitin carboxyl-terminal hydrolase 4 [Pteropus alecto]
Length = 964
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ + ++ +K T+V FPV+ ++ + + D
Sbjct: 810 KKFDLWSLPKILVVHLKRFSYSRYWRDKLDTVVEFPVRGLNMSEFVC------------D 857
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y +YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 858 LSARPY---VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 914
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 915 AYVLFYQRR 923
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK------KDSS-----IVYKTF 108
+ V QF +Q D + L++ L+ LH LN KK KD+S +V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDASGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 490
>gi|444517773|gb|ELV11787.1| Ubiquitin carboxyl-terminal hydrolase 20 [Tupaia chinensis]
Length = 752
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 409 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPFLAKECTSQI--- 465
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 466 -----------TAYDLLSVICHHGTAGSGHYVAYCQNVINGQWYEFDDQYVTEVHETVVQ 514
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 515 NAEAYVLFY 523
>gi|410988427|ref|XP_004000487.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Felis catus]
Length = 951
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ T K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 773 IELFTTVETLEKENPWYCPTCKQHQLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTL 832
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K + ES E YDL+A H G +G Y
Sbjct: 833 VEFPIRDLDFSEFV---IKPQNESAP--------ELYKYDLIAVSNHYGGLRDGHYTTFA 881
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 882 CNKDSGQWHYFDDNSVSPVTENQIESKAAYVLFYQ 916
>gi|354505004|ref|XP_003514562.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Cricetulus
griseus]
gi|344258150|gb|EGW14254.1| Ubiquitin carboxyl-terminal hydrolase 20 [Cricetulus griseus]
Length = 915
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 569 NGVKYCKVLCLPEILCVHLKRFRHEVMYSFKVSSHVSFPLEGLDLRPFLAKECTSQV--- 625
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 626 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 674
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 675 NVEAYVLFY 683
>gi|402860133|ref|XP_003894489.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Papio anubis]
Length = 921
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + Y
Sbjct: 768 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNPSARPY------ 821
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 822 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 872
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 873 AYVLFYQRR 881
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 277 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 333
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 334 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 393
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 394 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 448
>gi|148745324|gb|AAI42474.1| USP11 protein [Bos taurus]
Length = 910
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ T K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 732 IELFTTVETLEKENPWYCPTCKQHQLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTL 791
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K + +S+ E YDL+A H G +G Y
Sbjct: 792 VEFPIRDLDFSEFV---IKPQNDSSR--------ELYKYDLIAVSNHYGGLRDGHYTTFA 840
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 841 CNKDSGQWHYFDDSSVSPVTENQIESKAAYVLFYQ 875
>gi|355559641|gb|EHH16369.1| hypothetical protein EGK_11640 [Macaca mulatta]
gi|380788769|gb|AFE66260.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
gi|383409701|gb|AFH28064.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
gi|384942170|gb|AFI34690.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
Length = 963
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + Y
Sbjct: 810 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNPSARPY------ 863
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 864 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 914
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 915 AYVLFYQRR 923
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 490
>gi|194899564|ref|XP_001979329.1| GG24410 [Drosophila erecta]
gi|190651032|gb|EDV48287.1| GG24410 [Drosophila erecta]
Length = 895
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 129/316 (40%), Gaps = 63/316 (19%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
+++ L+++LWN + +K S L+ VV +K F+ +Q D +FL+ ++ LH
Sbjct: 609 VIEEVAALIKELWNGQ-YKCVASRD--LRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHS 665
Query: 92 ALNG--------------------TKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQR 131
L TK K+S I++ F G MK + +
Sbjct: 666 DLQTLHVPRQREMISASEKAWLEFTKAKESMILH-LFYGQMKSTVKCVAC---------- 714
Query: 132 LLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKT 191
+KE+ T F L+ +LPP + + + +++Y + + + KT
Sbjct: 715 ------HKESATYESFSNLSLELPP-----NSNVCQLNQCMDMYFSGERIHGWNCPSCKT 763
Query: 192 YKENFLKRFEITSLPPYLILYVKRF---TKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEV 247
K + +K+ +I+ LPP L++++KRF N+ K + FP++N+D I E
Sbjct: 764 -KRDAIKKLDISKLPPVLVVHLKRFYADPSNSGAYMKKQNYLRFPLENLDMNPYIARAES 822
Query: 248 KAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTD 307
+A T Y L A H G G Y GKW++ D V+
Sbjct: 823 RAVTPKT-------------YQLYAVSNHYGTMEGGHYTAFCKSANYGKWFKFDDQVVSA 869
Query: 308 ILPQMITLTEAYIQIY 323
+ + + AYI Y
Sbjct: 870 LDSSNVVSSAAYILFY 885
>gi|149692387|ref|XP_001501949.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Equus caballus]
Length = 373
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 130/346 (37%), Gaps = 52/346 (15%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
LC ++PL +YFL +++ + + F +M +W VSP E+ +
Sbjct: 61 CLCSISPLVEYFLSGKYITALQKDCSE----VATAFAYVMTDMW--LGDSDCVSP-EIFR 113
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+ + F Q D +FL + LN LH AL ++ S GS+ RK
Sbjct: 114 SALGNLYPAFMKKTQQDAQEFLIYVLNELHEALKKYHRRRSCEK-----GSVPRCCRK-- 166
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENI---IP---QVNL 174
+ E + RL E + LTC+ +K+EV + IP Q +L
Sbjct: 167 AIANETSIITRLF------EGQLNYSVTCLTCE---NCTYKNEVFTVLSLPIPSEAQCSL 217
Query: 175 YTILTKF--------NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKN 226
L F NN + K+ R I+ P +I ++KRF K
Sbjct: 218 QDCLQCFFQQDTLTWNNRIHCSFCETKQETAVRASISKAPKTVIFHLKRFDILGTMKRKL 277
Query: 227 PTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYR 286
T +++P+ N+D + P + + + Y+L A + H G+ G Y
Sbjct: 278 RTNIHYPLTNLDLTPYICPIFR---------------KHSKYNLCAVVNHFGDLDGGHYT 322
Query: 287 VHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
+ WY D V++I + AY+ Y + PT
Sbjct: 323 AFCKNSVTHAWYSFDDTRVSEIPDTSVQTATAYLLFYSCQPFSIPT 368
>gi|449268039|gb|EMC78912.1| Ubiquitin carboxyl-terminal hydrolase 8 [Columba livia]
Length = 1110
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 145/345 (42%), Gaps = 54/345 (15%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFL-----LVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R + + R S+FL + + FG +M+ LW + +K ++SP
Sbjct: 786 CLCNAPHLADYFNRNLYQDDINR----SNFLGHKGEVAEEFGVIMKALWTGQ-YK-YISP 839
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYK----TFLGS 111
+ + + QF Q D + L + ++ LH LN K D+ YK L
Sbjct: 840 KD-FKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLN---KADNRKRYKEENNDHLDD 895
Query: 112 MKVK----------TRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK 161
++ I + + + + +K++ T F+YL+ LP K
Sbjct: 896 LRAAELAWHKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLS--LPLASTSK 953
Query: 162 DEVLENIIPQVNLYTILTKF--NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKN 219
+ E + L++ K NN + + + LK+ EI LPP L++++KRF+ +
Sbjct: 954 CTLQECL----RLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYD 1009
Query: 220 TFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG 278
+ +K T V+FP++ +D ++ P+ K Y+L + H G
Sbjct: 1010 GRWKQKLQTSVDFPLETLDLSQYVIGPKNNLK----------------RYNLFSVSNHYG 1053
Query: 279 EPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + +W++ D V++I + + AYI Y
Sbjct: 1054 GLDGGHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFY 1098
>gi|297285790|ref|XP_002802844.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Macaca
mulatta]
Length = 935
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + Y
Sbjct: 782 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNPSARPY------ 835
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 836 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 886
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 887 AYVLFYQRR 895
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 291 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 347
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 348 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 407
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 408 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 462
>gi|195355562|ref|XP_002044260.1| GM15069 [Drosophila sechellia]
gi|194129561|gb|EDW51604.1| GM15069 [Drosophila sechellia]
Length = 896
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 129/316 (40%), Gaps = 63/316 (19%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
+++ L+++LWN + +K S L+ VV +K F+ +Q D +FL+ ++ LH
Sbjct: 610 VIEEVAALIKELWNGQ-YKCVASRD--LRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHS 666
Query: 92 ALNG--------------------TKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQR 131
L TK K+S I++ F G MK + +
Sbjct: 667 DLQTLHVPRQREMISASEKAWLEFTKAKESMILH-LFYGQMKSTVKCVAC---------- 715
Query: 132 LLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKT 191
+KE+ T F L+ +LPP + + + +++Y + + + KT
Sbjct: 716 ------HKESATYESFSNLSLELPP-----NSNVCQLNQCMDMYFSGERIHGWNCPSCKT 764
Query: 192 YKENFLKRFEITSLPPYLILYVKRF---TKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEV 247
K + +K+ +I+ LPP L++++KRF N+ K + FP++N+D I E
Sbjct: 765 -KRDAIKKLDISKLPPVLVVHLKRFYADPSNSGAYMKKQNYLRFPLENLDMNPYIARAES 823
Query: 248 KAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTD 307
+A T Y L A H G G Y GKW++ D V+
Sbjct: 824 RAVTPKT-------------YQLYAVSNHYGTMEGGHYTAFCKSANYGKWFKFDDQVVSA 870
Query: 308 ILPQMITLTEAYIQIY 323
+ + + AYI Y
Sbjct: 871 LDSSNVVSSAAYILFY 886
>gi|119936054|gb|ABM06064.1| ubiquitin specific protease 11 [Bos taurus]
Length = 802
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ T K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 624 IELFTTVETLEKENPWYCPTCKQHQLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTL 683
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K + +S+ E YDL+A H G +G Y
Sbjct: 684 VEFPIRDLDFSEFV---IKPQNDSSR--------ELYKYDLIAVSNHYGGLRDGHYTTFA 732
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 733 CNKDSGQWHYFDDSSVSPVTENQIESKAAYVLFYQ 767
>gi|122692453|ref|NP_001073777.1| ubiquitin carboxyl-terminal hydrolase 11 [Bos taurus]
gi|119936039|gb|ABM06061.1| ubiquitin specific protease 11 [Bos taurus]
gi|296470784|tpg|DAA12899.1| TPA: ubiquitin specific peptidase 11 [Bos taurus]
Length = 756
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ T K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 578 IELFTTVETLEKENPWYCPTCKQHQLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTL 637
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K + +S+ E YDL+A H G +G Y
Sbjct: 638 VEFPIRDLDFSEFV---IKPQNDSSR--------ELYKYDLIAVSNHYGGLRDGHYTTFA 686
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 687 CNKDSGQWHYFDDSSVSPVTENQIESKAAYVLFYQ 721
>gi|148233102|ref|NP_001090641.1| ubiquitin carboxyl-terminal hydrolase 20 [Xenopus (Silurana)
tropicalis]
gi|281312479|sp|A0JM59.1|UBP20_XENTR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|117557978|gb|AAI25750.1| usp20 protein [Xenopus (Silurana) tropicalis]
Length = 884
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ ++ L E ++
Sbjct: 538 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKIGSHVSFPLEGLNLRPFLAKECVSRI--- 594
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL+A I H G S+G Y + + G+WYE D +VT++ ++
Sbjct: 595 -----------TTYDLLAVICHHGSASSGHYISYCQNVINGQWYEFDDQYVTEVHETVVQ 643
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 644 NAEAYVLFY 652
>gi|350595653|ref|XP_003484153.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Sus scrofa]
Length = 951
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ T K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 773 IELFTTVETLEKENPWYCPTCKQHQLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTL 832
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K + ES E YDL+A H G +G Y
Sbjct: 833 VEFPIRDLDFSEFV---IKPQNESAP--------ELYKYDLIAVSNHYGGLRDGHYTTFA 881
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 882 CNKDSGQWHYFDDNSVSPVTENQIESKAAYVLFYQ 916
>gi|308799161|ref|XP_003074361.1| putative queuine tRNA-ribosyltransferase (ISS) [Ostreococcus tauri]
gi|116000532|emb|CAL50212.1| putative queuine tRNA-ribosyltransferase (ISS) [Ostreococcus tauri]
Length = 2214
Score = 61.2 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 197 LKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMY 256
LK+ ++ +PP L++++KRF+ + + +K T+V+FP+ ++D ++P V A S
Sbjct: 1180 LKKLDLWRMPPILVMHLKRFSYSRIYRDKIDTLVHFPLNDLD----MSPYVLANTSSG-- 1233
Query: 257 DLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDI-LPQMITL 315
+ +YDL A + H G G Y + H G W+ D T + +
Sbjct: 1234 -------PAPVYDLYAVVNHFGGMGGGHYTAYTRHAEEGTWHLYDDSRCTPVESTAALNN 1286
Query: 316 TEAYIQIYELRTTPSPTAMS 335
AY+ Y+ R P+ AMS
Sbjct: 1287 KAAYVVFYKRRDVPTRHAMS 1306
>gi|383409703|gb|AFH28065.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Macaca mulatta]
gi|384942172|gb|AFI34691.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Macaca mulatta]
Length = 916
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + Y
Sbjct: 763 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNPSARPY------ 816
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 817 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 867
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 868 AYVLFYQRR 876
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 272 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 328
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 329 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 388
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 389 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 443
>gi|28571791|ref|NP_650948.2| UBPY ortholog, isoform A [Drosophila melanogaster]
gi|28381390|gb|AAF55858.2| UBPY ortholog, isoform A [Drosophila melanogaster]
gi|384551736|gb|AFH97157.1| FI20021p1 [Drosophila melanogaster]
Length = 896
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 129/316 (40%), Gaps = 63/316 (19%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
+++ L+++LWN + +K S L+ VV +K F+ +Q D +FL+ ++ LH
Sbjct: 610 VIEEVAALIKELWNGQ-YKCVASRD--LRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHS 666
Query: 92 ALNG--------------------TKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQR 131
L TK K+S I++ F G MK + +
Sbjct: 667 DLQTLHVPRQREMISASEKAWLEFTKAKESMILH-LFYGQMKSTVKCVAC---------- 715
Query: 132 LLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKT 191
+KE+ T F L+ +LPP + + + +++Y + + + KT
Sbjct: 716 ------HKESATYESFSNLSLELPP-----NSNVCQLNQCMDMYFSGERIHGWNCPSCKT 764
Query: 192 YKENFLKRFEITSLPPYLILYVKRF---TKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEV 247
K + +K+ +I+ LPP L++++KRF N+ K + FP++N+D I E
Sbjct: 765 -KRDAIKKLDISKLPPVLVVHLKRFYADPSNSGSYMKKQNYLRFPLENLDMNPYIARAES 823
Query: 248 KAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTD 307
+A T Y L A H G G Y GKW++ D V+
Sbjct: 824 RAVTPKT-------------YQLYAVSNHYGTMEGGHYTAFCKSANYGKWFKFDDQVVSA 870
Query: 308 ILPQMITLTEAYIQIY 323
+ + + AYI Y
Sbjct: 871 LDSSNVVSSAAYILFY 886
>gi|338729116|ref|XP_001917109.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Equus caballus]
Length = 960
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 782 IELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTL 841
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K + ES E YDL+A H G +G Y
Sbjct: 842 VEFPIRDLDFSEFV---IKPQNESAP--------ELYKYDLIAVSNHYGGLRDGHYTTFA 890
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE-----LRTTPSPTA 333
+K G+W+ D V+ + I AY+ Y+ R P P +
Sbjct: 891 CNKDSGQWHYFDDSSVSPVTENQIESKAAYVLFYQRQDVARRLQPQPAS 939
>gi|410979290|ref|XP_003996018.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Felis catus]
Length = 913
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 567 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPFLAKECTSQI--- 623
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 624 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 672
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 673 NAEAYVLFY 681
>gi|355746701|gb|EHH51315.1| hypothetical protein EGM_10667, partial [Macaca fascicularis]
Length = 889
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + Y
Sbjct: 736 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNPSARPY------ 789
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 790 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 840
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 841 AYVLFYQRR 849
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 245 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 301
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 302 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 361
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 362 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 416
>gi|164663834|ref|NP_663603.3| ubiquitin carboxyl-terminal hydrolase 11 [Mus musculus]
gi|342187159|sp|Q99K46.4|UBP11_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 11; AltName:
Full=Deubiquitinating enzyme 11; AltName: Full=Ubiquitin
thioesterase 11; AltName:
Full=Ubiquitin-specific-processing protease 11
gi|148668416|gb|EDL00740.1| ubiquitin specific peptidase 11, isoform CRA_a [Mus musculus]
Length = 921
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ + EK T+
Sbjct: 744 IKLFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKISREKLDTL 803
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K K ES+ DL K YDL+A H G +G Y
Sbjct: 804 VQFPIRDLDFSEFV---IKPKNESSP-DLYK-------YDLIAVSNHYGGMRDGHYTTFA 852
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 853 CNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 887
>gi|74139517|dbj|BAE40896.1| unnamed protein product [Mus musculus]
Length = 548
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ + EK T+
Sbjct: 371 IKLFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKISREKLDTL 430
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K K ES+ DL K YDL+A H G +G Y
Sbjct: 431 VQFPIRDLDFSEFV---IKPKNESSP-DLYK-------YDLIAVSNHYGGMRDGHYTTFA 479
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 480 CNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 514
>gi|380020720|ref|XP_003694227.1| PREDICTED: uncharacterized protein LOC100870505 [Apis florea]
Length = 1055
Score = 61.2 bits (147), Expect = 7e-07, Method: Composition-based stats.
Identities = 73/341 (21%), Positives = 124/341 (36%), Gaps = 45/341 (13%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L + PL +Y L E A + L++ F +++ +LW V ++
Sbjct: 734 LSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIHELW-------EVGGDLVVNT 786
Query: 62 VVLWSRKQ-----FQFTEQSDPIDFLSWFLNTLHRALNGTKKK-------------DSSI 103
L S+ Q F Q D +FL + L LH +N K DS
Sbjct: 787 TALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQPIHTDIPEMYTDSQK 846
Query: 104 VYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDE 163
+++ ++ + I V + + +R L T + T PF L+ LP P
Sbjct: 847 AVESWKRYLRSEDSMIVDVFVGQ-LRSSLHCTSCDHVSVTLDPFWDLS--LPIPARSGTV 903
Query: 164 VLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFV 223
L + +L + + + + K F I P L++++KRF+ F
Sbjct: 904 KLSQCLEHFTREEVLDGDEKPTCSKCQM-RRKCTKSFSIQKFPKILVIHLKRFSPMERFR 962
Query: 224 EKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNG 283
K +V+FP+ +D P V Y+L H G +G
Sbjct: 963 SKLNVMVDFPLTGLDLSAFAAPRVPG----------------CTYNLYGVANHSGTTHSG 1006
Query: 284 TYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
Y + H +W+E D V+ + + + EAY+ YE
Sbjct: 1007 HYTAYCKHPYSAEWHEYNDSRVSAVPARSVVSNEAYVLFYE 1047
>gi|189217810|ref|NP_001121345.1| ubiquitin carboxyl-terminal hydrolase 20 [Xenopus laevis]
gi|281312478|sp|B1WBD7.1|UBP20_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|171846441|gb|AAI61716.1| LOC100158436 protein [Xenopus laevis]
Length = 840
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ ++ L E ++
Sbjct: 494 NGVKYCKVLRLPEVLCIHLKRFRHEVMYSFKIGSHVSFPLEGLNLRPFLAKECVSRI--- 550
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL+A I H G S+G Y + + G+WYE D +VT++ ++
Sbjct: 551 -----------TTYDLLAVICHHGSASSGHYISYCQNVINGQWYEFDDQYVTEVHETVVQ 599
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 600 NAEAYVLFY 608
>gi|157427794|ref|NP_001098803.1| ubiquitin carboxyl-terminal hydrolase 20 [Bos taurus]
gi|281312476|sp|A7Z056.1|UBP20_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|157279133|gb|AAI53255.1| USP20 protein [Bos taurus]
gi|296482025|tpg|DAA24140.1| TPA: ubiquitin carboxyl-terminal hydrolase 20 [Bos taurus]
Length = 912
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 566 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPFLAKECTSQI--- 622
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 623 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 671
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 672 NAEAYVLFY 680
>gi|417412856|gb|JAA52787.1| Putative ubiquitin carboxyl-terminal hydrolase 11, partial
[Desmodus rotundus]
Length = 833
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ +LP LI+++KRF+ F EK T+
Sbjct: 653 IELFTTVETLEKENPWYCPSCKQHQLATKKLDLWTLPETLIIHLKRFSYTKFSREKLDTL 712
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K + ES E YDL+A H G +G Y
Sbjct: 713 VEFPIRDLDFSEFV---IKPQNESAP--------ELYKYDLIAVSNHYGGLRDGHYTTFA 761
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 762 CNKDSGQWHYFDDSSVSPVSENQIESKAAYVLFYQ 796
>gi|328784869|ref|XP_392493.4| PREDICTED: hypothetical protein LOC408964 [Apis mellifera]
Length = 987
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 124/342 (36%), Gaps = 45/342 (13%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L + PL +Y L E A + L++ F +++ +LW V ++
Sbjct: 665 CLSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIHELW-------EVGGDLVVN 717
Query: 61 AVVLWSRKQ-----FQFTEQSDPIDFLSWFLNTLHRALNGTKKK-------------DSS 102
L S+ Q F Q D +FL + L LH +N K DS
Sbjct: 718 TTALKSQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTVKPQPIHTDIPEMYTDSQ 777
Query: 103 IVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKD 162
+++ ++ + I V + + +R L T + T PF L+ LP P
Sbjct: 778 KAVESWKRYLRSEDSMIVDVFVGQ-LRSSLHCTSCDHVSVTLDPFWDLS--LPIPARSGT 834
Query: 163 EVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFF 222
L + +L + + + + K F I P L++++KRF+ F
Sbjct: 835 VKLSQCLEHFTREEVLDGDEKPTCSKCQ-MRRKCTKSFSIQKFPKILVIHLKRFSPMERF 893
Query: 223 VEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSN 282
K +V+FP+ +D P V Y+L H G +
Sbjct: 894 RSKLNVMVDFPLTGLDLSAFAAPRVPG----------------CTYNLYGVANHSGTTHS 937
Query: 283 GTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
G Y + H +W+E D V+ + + + EAY+ YE
Sbjct: 938 GHYTAYCKHPYSAEWHEYNDSRVSAVPARSVVSNEAYVLFYE 979
>gi|334314734|ref|XP_001380549.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Monodelphis domestica]
Length = 370
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 126/337 (37%), Gaps = 35/337 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
LC +TPL +YFL +++ G+++ F LM +W + VSP E+ +
Sbjct: 59 CLCSITPLVEYFLSGKYITALQKDSGEAA----TAFAYLMTDMWLGDS--DCVSP-EVFR 111
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKD--SSIVYKTFLGSMKVKTRK 118
+ F Q D +FL + LN LH AL ++K + K + ++
Sbjct: 112 TAIGKIYPTFLKRTQQDAQEFLIYVLNELHEALKKYRRKKPHEKVTTKCYRKVASSESSI 171
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK---DEVLENIIPQVNLY 175
I + E ++ ++ + T F L+ LP P + E L Q L
Sbjct: 172 ITRL-FEGQLNYDIVCLKCENCTYKNEVFTVLS--LPIPSECECSLQECLGCFFQQDTL- 227
Query: 176 TILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVK 235
+NN+ + K++ R I P +I ++KRF K T +++P+
Sbjct: 228 ----TWNNQIHCAFCESKQDAAVRASIAKAPKTVIFHLKRFDCQGRMKRKLRTDIHYPLN 283
Query: 236 NVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIG 295
N+D + P + + Y L + H G+ G Y +
Sbjct: 284 NLDLSPYIYPLFR---------------KHPKYSLCGVVNHFGDLDGGHYTAFCKNTVSQ 328
Query: 296 KWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
WY D V +I + AY+ Y + PT
Sbjct: 329 TWYSFDDTRVCEIPDSSVQTAAAYLLFYSCQPFSIPT 365
>gi|332215940|ref|XP_003257099.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2
[Nomascus leucogenys]
Length = 916
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + Y
Sbjct: 763 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPY------ 816
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 817 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 867
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 868 AYVLFYQRR 876
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 272 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 328
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK------KDSS-----IVYKTF 108
+ V QF +Q D + L++ L+ LH LN KK KD+S +V K
Sbjct: 329 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDASGRPDAVVAKEA 388
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 389 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 443
>gi|195130331|ref|XP_002009605.1| GI15450 [Drosophila mojavensis]
gi|193908055|gb|EDW06922.1| GI15450 [Drosophila mojavensis]
Length = 1158
Score = 60.8 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 79/306 (25%), Positives = 123/306 (40%), Gaps = 39/306 (12%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTE--QSDPIDFLSWFLNTL 89
++ F +L++++W N S V+P E+ +A +S K +++ Q D +FL +FL++L
Sbjct: 877 ILYEFAKLIQEMWT-SNVHS-VTPMELKRA---FSTKHRMYSDYNQQDAQEFLRFFLDSL 931
Query: 90 HRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKET-------- 141
H ALN T K ++ L K E R L + K T
Sbjct: 932 HSALN-TGVKGETLNIDDNLSDNKKADLTWEWYARHENSLIRDLFVGQLKSTLKCTTCGN 990
Query: 142 --ETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKR 199
T PF L+ LP K E ++ + +L + + KT + K
Sbjct: 991 TSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREE---VLDGDEMPTCSKCKT-RRKCTKS 1046
Query: 200 FEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLV 259
F I P YL++++KRF++ + K IV FP A E M
Sbjct: 1047 FTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFPT--------------ADRELNMASYG 1090
Query: 260 KAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQ-MITLTEA 318
+ Y L A H G + G Y H KW+E D V+D +P+ + + A
Sbjct: 1091 ANANSNVHYSLYAISNHMGSTAGGHYVAICKHPVSRKWHEFNDNSVSDAIPENCLVSSSA 1150
Query: 319 YIQIYE 324
YI YE
Sbjct: 1151 YILFYE 1156
>gi|114586840|ref|XP_001163407.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 7 [Pan
troglodytes]
gi|397495143|ref|XP_003818420.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Pan
paniscus]
gi|410227906|gb|JAA11172.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410259862|gb|JAA17897.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410289714|gb|JAA23457.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410353789|gb|JAA43498.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
Length = 915
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + Y
Sbjct: 762 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPY------ 815
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 816 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 866
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 867 AYVLFYQRR 875
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 272 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 328
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 329 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 388
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 389 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 443
>gi|62898145|dbj|BAD97012.1| ubiquitin specific protease, proto-oncogene isoform a variant [Homo
sapiens]
Length = 963
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + +
Sbjct: 810 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVC------------N 857
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y +YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 858 LSARPY---VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 914
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 915 AYVLFYQRR 923
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 490
>gi|68482089|ref|XP_715062.1| hypothetical protein CaO19.7265 [Candida albicans SC5314]
gi|46436668|gb|EAK96027.1| hypothetical protein CaO19.7265 [Candida albicans SC5314]
Length = 242
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 25/128 (19%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L H+ P+R+Y+L E P + L G L+RK+W+P FKSH++PHE +
Sbjct: 140 VLAHIEPVRNYYLLET--------PTNP---LNVHLGLLIRKMWSPHLFKSHIAPHEFMN 188
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+V S+K+F E+ P FL W LN Y+ G ++V + I
Sbjct: 189 SVSEESKKRFTL-EKGHPKSFLLWLLN-------------RGGPYECLRGKVEVTSTPIV 234
Query: 121 PVELEEKV 128
P E ++KV
Sbjct: 235 PHEGKDKV 242
>gi|390346299|ref|XP_792380.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like
[Strongylocentrotus purpuratus]
Length = 845
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTF--FVEKNPTIVNFPVKNVDFGDILTPEVKAKYE 252
N +K + LP L +++KRF +F + K V+FP+ ++D L+ + K K
Sbjct: 529 NGVKFVHVLELPEVLCIHLKRFRHESFTSYCSKLNNYVSFPLDSLDMTPYLSKDCKNK-- 586
Query: 253 STMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQM 312
YDL A I H G G Y + + G+WYE D++VT++
Sbjct: 587 ------------CATYDLSAVICHHGTAGGGHYTSYAVNWLNGQWYEYDDIYVTEVSTMQ 634
Query: 313 ITLTEAYIQIYE 324
+ EAY+ Y+
Sbjct: 635 VANCEAYVLFYK 646
>gi|332215938|ref|XP_003257098.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Nomascus leucogenys]
Length = 963
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + Y
Sbjct: 810 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPY------ 863
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 864 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 914
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 915 AYVLFYQRR 923
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK------KDSS-----IVYKTF 108
+ V QF +Q D + L++ L+ LH LN KK KD+S +V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDASGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 490
>gi|26327595|dbj|BAC27541.1| unnamed protein product [Mus musculus]
Length = 699
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ + EK T+
Sbjct: 522 IKLFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKISREKLDTL 581
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K K ES+ DL K YDL+A H G +G Y
Sbjct: 582 VQFPIRDLDFSEFV---IKPKNESSP-DLYK-------YDLIAVSNHYGGMRDGHYTTFA 630
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 631 CNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 665
>gi|426257121|ref|XP_004022183.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 isoform 1 [Ovis
aries]
Length = 756
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ T K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 578 IELFTTVETLEKENPWYCPTCKQHQLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTL 637
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K + +S E YDL+A H G +G Y
Sbjct: 638 VEFPIRDLDFSEFV---IKPQNDSAR--------ELYKYDLIAVSNHYGGLRDGHYTTFA 686
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 687 CNKDSGQWHYFDDSSVSPVTENQIESKAAYVLFYQ 721
>gi|62897009|dbj|BAD96445.1| ubiquitin specific protease, proto-oncogene isoform b variant [Homo
sapiens]
Length = 916
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + Y
Sbjct: 763 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPY------ 816
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 817 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 867
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 868 AYVLFYQRR 876
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +H +P M
Sbjct: 272 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHAAPR-MF 328
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++ +
Sbjct: 329 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVAAEEA 388
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 389 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 443
>gi|42542785|gb|AAH66180.1| Usp4 protein, partial [Mus musculus]
gi|45219741|gb|AAH66865.1| Usp4 protein, partial [Mus musculus]
Length = 961
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 15/140 (10%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV ++ + + Y
Sbjct: 808 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVGALNMSEFVCDRSARPY------ 861
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + ++ GKWY D V+ I
Sbjct: 862 ---------VYDLIAVSNHYGAMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKA 912
Query: 318 AYIQIYELRTTPSPTAMSEG 337
AY+ Y+ R + S G
Sbjct: 913 AYVLFYQRRDDECSSTSSLG 932
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL +YFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 318 CLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--THVAPR-MF 374
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 375 KTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLEPKDANGRPDAVVAKEA 434
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD ++E
Sbjct: 435 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRIME 489
>gi|40795667|ref|NP_955475.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Homo sapiens]
gi|2656143|gb|AAC27356.1| UnpES [Homo sapiens]
gi|119585373|gb|EAW64969.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_b
[Homo sapiens]
gi|119585377|gb|EAW64973.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_b
[Homo sapiens]
Length = 916
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + Y
Sbjct: 763 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPY------ 816
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 817 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 867
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 868 AYVLFYQRR 876
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 272 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 328
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 329 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 388
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 389 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 443
>gi|47169480|tpe|CAE48377.1| TPA: ubiquitin specific protease 11 [Rattus norvegicus]
Length = 700
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ + F EK T+
Sbjct: 523 IKLFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKFSREKLDTL 582
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K K ES DL K YDL+A H G +G
Sbjct: 583 VQFPIRDLDFSEFV---IKPKNESAP-DLYK-------YDLIAVSNHYGGMRDGHCTTFA 631
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTP---SPTAMSE 336
+K G+W+ D V+ + I AY+ Y+ + S TA SE
Sbjct: 632 CNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQDVGRRQSQTASSE 681
>gi|270011227|gb|EFA07675.1| hypothetical protein TcasGA2_TC030699 [Tribolium castaneum]
Length = 791
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 24/162 (14%)
Query: 170 PQVNLYTILTKF--------NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTF 221
P V L+ L F +N E N +K ++ LP L +++KRF
Sbjct: 320 PVVTLHDCLAAFFSTDELKGDNMYSCEKCNKLRNGIKFSKVLQLPEVLCIHLKRFRHELM 379
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
F K + V+FP+K +D L + +K T Y+L + I H G
Sbjct: 380 FSSKISSAVSFPLKGLDMRPYLHTDCISKV--------------TTYELFSVICHYGTAG 425
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + G+WYE D +VT + P+ + EAY+ Y
Sbjct: 426 GGHYICYALNG--GQWYEFDDQYVTRVPPEKVQSCEAYVLFY 465
>gi|345805954|ref|XP_537816.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Canis lupus
familiaris]
Length = 915
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 569 NGVKYCKVLRLPEILYIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPFLAKECTSQI--- 625
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 626 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 674
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 675 SAEAYVLFY 683
>gi|40795665|ref|NP_003354.2| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Homo sapiens]
gi|116242839|sp|Q13107.3|UBP4_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4; AltName:
Full=Ubiquitous nuclear protein homolog
gi|2656141|gb|AAC27355.1| UnpEL [Homo sapiens]
gi|115527981|gb|AAI25131.1| Ubiquitin specific peptidase 4 (proto-oncogene) [Homo sapiens]
gi|119585375|gb|EAW64971.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_d
[Homo sapiens]
gi|119585376|gb|EAW64972.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_d
[Homo sapiens]
gi|158257022|dbj|BAF84484.1| unnamed protein product [Homo sapiens]
Length = 963
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + +
Sbjct: 810 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVC------------N 857
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y +YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 858 LSARPY---VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 914
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 915 AYVLFYQRR 923
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 490
>gi|2459395|gb|AAB72237.1| ubiquitin protease [Homo sapiens]
Length = 963
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + +
Sbjct: 810 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVC------------N 857
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y +YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 858 LSARPY---VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 914
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 915 AYVLFYQRR 923
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAP-SMF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 490
>gi|145551979|ref|XP_001461666.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429501|emb|CAK94293.1| unnamed protein product [Paramecium tetraurelia]
Length = 484
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 144/354 (40%), Gaps = 67/354 (18%)
Query: 1 ALCHVTPLRDYFLREINYARVK-RPPGDSSFLLVQRFGELMRKLWN-------------- 45
AL + PL DYF+ +++ + P S +VQ F +L+R LW
Sbjct: 66 ALSNTQPLTDYFMSQLHVKEINPDNPLSSQGNIVQSFAQLIRLLWQKVDQYTLEEIQALK 125
Query: 46 PRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK------ 99
P F S + + + F Q D +F+++ L+ +H LN KKK
Sbjct: 126 PTQFISTIGNYNPI----------FAEGTQEDAHEFIAFLLDMIHEDLNRIKKKPYVEQT 175
Query: 100 ---------DSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYL 150
D+ + +L + + + + + + Y PF+YL
Sbjct: 176 KFTKLPTNDDAHQEWTKYLSRNQSIIVDLFQGHMLDTLSCLTCKSSRY----CFEPFMYL 231
Query: 151 TCDLPPPPLFKD-EVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYL 209
+ P L ++ ++LE I + T+ K + N K+ ++ S+P L
Sbjct: 232 SV----PVLSRECDLLECIEEFLKTETLTGDEGWNCTKCSQRRDSN--KKIDLWSMPNIL 285
Query: 210 ILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYD 269
I+++KRF N+ F K ++V +P++N+ F +++ + + E YD
Sbjct: 286 IIHLKRFKFNSQFRAKIRSLVRYPLQNLSFENLVCTK---------------QIEKPTYD 330
Query: 270 LVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
L A I H G ++G Y + ++ +WY D V+ + Q ++AY+ Y
Sbjct: 331 LYAVINHSGTLTSGHYTAYAKNRDDLQWYHYNDSLVSPV-SQPENQSDAYLLFY 383
>gi|114586836|ref|XP_001163445.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 8 [Pan
troglodytes]
gi|397495141|ref|XP_003818419.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Pan
paniscus]
gi|410227908|gb|JAA11173.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410259864|gb|JAA17898.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410289716|gb|JAA23458.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410353791|gb|JAA43499.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
Length = 962
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + +
Sbjct: 809 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVC------------N 856
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y +YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 857 LSARPY---VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 913
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 914 AYVLFYQRR 922
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 490
>gi|115529049|gb|AAI25132.1| Ubiquitin specific peptidase 4 (proto-oncogene) [Homo sapiens]
Length = 963
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + +
Sbjct: 810 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVC------------N 857
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y +YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 858 LSARPY---VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 914
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 915 AYVLFYQRR 923
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L E K + T PF YLT P PL KD V+E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLGCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 490
>gi|91084663|ref|XP_967750.1| PREDICTED: similar to ubiquitin specific protease 41 [Tribolium
castaneum]
gi|270008628|gb|EFA05076.1| hypothetical protein TcasGA2_TC015173 [Tribolium castaneum]
Length = 764
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 132/342 (38%), Gaps = 63/342 (18%)
Query: 8 LRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSR 67
L+D+++ +IN L++ F E+++KLW+ ++ V L++ +
Sbjct: 453 LQDHYVNDINTTTSAMKGS-----LIKAFAEVIKKLWS-QDASDRVVNTSSLKSQIQRFA 506
Query: 68 KQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-------------DSSIVYKTFLGSMKV 114
+F Q D +FL + L LH +N K+K DS +++ +++
Sbjct: 507 PRFIGYAQQDAQEFLRYLLEGLHEDVNRVKEKPKPIITEIDEKLTDSEKSAESWNRYLRM 566
Query: 115 KTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNL 174
KI + + ++ L T + T PF L+ LP P QV L
Sbjct: 567 DNSKIVDYFVGQ-LKSTLKCTHCGHCSVTFDPFWDLS--LPIPQR---------AGQVRL 614
Query: 175 YTILTKFNNE-----SEKEYKTY---KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKN 226
L F E EK + + K F I P L++++KRF+ F K
Sbjct: 615 AQCLDSFTREETLDGDEKPTCSKCKERRKCTKSFTIQKFPKILVIHLKRFSLAERFRGKL 674
Query: 227 PTIVNFPVKNVDF----GDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSN 282
V+FP++ +D D +TP Y+L A H G +
Sbjct: 675 SVTVDFPLEGLDMSNYAADNITP--------------------CRYNLYAISNHSGTTYS 714
Query: 283 GTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
G Y + H W+E D V+ I + I EAY+ YE
Sbjct: 715 GHYTAYCRHPYTKAWHEYNDSRVSSISSKAIVSGEAYVLFYE 756
>gi|441644453|ref|XP_003253547.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Nomascus
leucogenys]
Length = 577
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 130/313 (41%), Gaps = 32/313 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLW--NPRNFKSHVSPHEM 58
L + LRDY L+ + Y R ++ L++ F +L++ +W +P + VSP E
Sbjct: 284 CLSNTRELRDYCLQRL-YMRDLHHGSNAHTALMEEFAKLIQTIWTSSPNDV---VSPSEF 339
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK 118
+ ++ + + +Q D +FL + L+ LH +N + S K R+
Sbjct: 340 KTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQ 398
Query: 119 IPPVELE-EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ LE E R L + K + T + Y + P + + P+V L
Sbjct: 399 MWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEVTLMDC 458
Query: 178 LTKFNNES-----EK---EYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ F E EK ++ +K+F I P L+L++KRF+++ K T
Sbjct: 459 MRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 518
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
VNFP++++D + + E+T + +Y+L A H G G Y +
Sbjct: 519 VNFPLRDLDLREFAS-------ENTNH---------AVYNLYAVSNHSGTTMGGHYTAYC 562
Query: 290 YHKGIGKWYEIQD 302
G G+W+ D
Sbjct: 563 RSPGTGEWHTFND 575
>gi|21483568|gb|AAM52759.1| SD04548p [Drosophila melanogaster]
Length = 896
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 128/316 (40%), Gaps = 63/316 (19%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
+++ L+++LWN + +K S L+ VV +K F+ +Q D +FL+ ++ LH
Sbjct: 610 VIEEVAALIKELWNGQ-YKCVASRD--LRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHS 666
Query: 92 ALNG--------------------TKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQR 131
L TK K+S I++ F G MK + +
Sbjct: 667 DLQTLHVPRQREMISASEKAWLEFTKAKESMILH-LFYGQMKSTVKCVAC---------- 715
Query: 132 LLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKT 191
+KE+ T F L+ +LPP + + + +++Y + + KT
Sbjct: 716 ------HKESATYESFSNLSLELPP-----NSNVCQLNQCMDMYFSGERIHGWKCPSCKT 764
Query: 192 YKENFLKRFEITSLPPYLILYVKRF---TKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEV 247
K + +K+ +I+ LPP L++++KRF N+ K + FP++N+D I E
Sbjct: 765 -KRDAIKKLDISKLPPVLVVHLKRFYADPSNSGSYMKKQNYLRFPLENLDMNPYIARAES 823
Query: 248 KAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTD 307
+A T Y L A H G G Y GKW++ D V+
Sbjct: 824 RAVTPKT-------------YQLYAVSNHYGTMEGGHYTAFCKSANYGKWFKFDDQVVSA 870
Query: 308 ILPQMITLTEAYIQIY 323
+ + + AYI Y
Sbjct: 871 LDSSNVVSSAAYILFY 886
>gi|449267415|gb|EMC78360.1| Ubiquitin carboxyl-terminal hydrolase 2, partial [Columba livia]
Length = 450
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 137/358 (38%), Gaps = 66/358 (18%)
Query: 1 ALCHVTPLRDY-----FLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
L + LRDY +LR++N R L+ F +L++ LW + +VSP
Sbjct: 129 CLSNTKELRDYCLQNQYLRDLNNNSRMRTA------LMSEFAKLIQLLWTS-SPNENVSP 181
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVK 115
E + ++ + + +Q D +FL + L+ LH +N L +
Sbjct: 182 SEFKTQIQRYAPRFVGYNQQ-DAQEFLRFLLDGLHSEVN------------RVLVRPRAS 228
Query: 116 TRKIPPVELEEKVRQRLLLTEEYKETETESPFL-----YLTCD----------------L 154
T + + +EK RQ +E +++ F+ LTC L
Sbjct: 229 TDTLDHLPDDEKSRQMWRRYQEREDSRISDLFVGQLKSSLTCSECGYCSTAFDPFWDLSL 288
Query: 155 PPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKEN--FLKRFEITSLPPYLILY 212
P P EV ++ + L+T + + + K K+F I P L+L+
Sbjct: 289 PIPKKSYGEV--TLMDCLRLFTKEDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLH 346
Query: 213 VKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVA 272
+KRF++ K T VNF +K++D + + +Y+L A
Sbjct: 347 LKRFSEARIRTSKLTTFVNFQLKDLD----------------LREFASQSCNHAVYNLYA 390
Query: 273 NIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
H G G Y + + +W+ D VT + + ++AY+ YEL + S
Sbjct: 391 VSNHSGTTMGGHYTAYCKNPVSSEWHSFNDSRVTPMSSSHVRSSDAYLLFYELASPSS 448
>gi|56693219|ref|NP_001008574.1| ubiquitin carboxyl-terminal hydrolase 2 [Danio rerio]
gi|56269271|gb|AAH86963.1| Zgc:92134 [Danio rerio]
Length = 391
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 16/127 (12%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F + P L+L++KRF++ K T VNFP+K++D + +
Sbjct: 277 KKFTVQKFPKILVLHLKRFSEARIRTSKLSTFVNFPMKDLD----------------LRE 320
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+ S +Y+L A H G G Y + + G+WY D VT + + ++
Sbjct: 321 FASDRSSSAVYNLYAVSNHSGTTMGGHYTAYCCNPENGEWYTYNDSRVTPMSASQVRSSD 380
Query: 318 AYIQIYE 324
AY+ YE
Sbjct: 381 AYVLFYE 387
>gi|297734726|emb|CBI16960.3| unnamed protein product [Vitis vinifera]
Length = 87
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Query: 5 VTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVV- 63
V PLR++FL NY P L+ RF EL R+ W+P N + + + L AV
Sbjct: 3 VIPLRNFFLILENYKHCNSP-------LIHRFQELTRRYWHPWNCRIKLKSYTFLNAVTK 55
Query: 64 LWSRKQFQFTEQSDPIDFLSWFLNTLH 90
S ++Q +SDPI+F++W LN+LH
Sbjct: 56 ATSNNRYQMGVESDPIEFMAWLLNSLH 82
>gi|292615153|ref|XP_002662557.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Danio
rerio]
Length = 958
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N + +K T+V+FP+++++ + +
Sbjct: 817 KKFDLWSLPRILVVHLKRFSYNRCWRDKLDTVVDFPIRDLNMSEFV-------------- 862
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
K + +YDL+A H G G Y + +K GKWY D V+ I
Sbjct: 863 -CDPKADPYIYDLIAVSNHYGGMGGGHYTAYGKNKADGKWYYFDDSSVSAATEDQIVTKA 921
Query: 318 AYIQIYELRTTPSPT 332
AY+ Y+ R +P+
Sbjct: 922 AYVLFYQRRDADTPS 936
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL +YFL + A + R P + + + +L++++W R+ S+V+P
Sbjct: 285 CLSNTPPLTEYFLEDRYEAEINRENPLGMRGEIAEAYADLVKQMWLSRS--SYVAPRTFK 342
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
V ++ QF +Q D + L++ L+ LH LN KKK IV K
Sbjct: 343 TQVGRFA-PQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLALRDAEGRPDEIVAKEA 401
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ I + L+ E K + T PF YLT P P+ KD +E
Sbjct: 402 WANHRLRNDSIIVDIFHGLFKSTLVCPECSKVSVTFDPFCYLTL---PLPMKKDRTME 456
>gi|426257123|ref|XP_004022184.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 isoform 2 [Ovis
aries]
Length = 802
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ T K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 624 IELFTTVETLEKENPWYCPTCKQHQLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTL 683
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K + +S E YDL+A H G +G Y
Sbjct: 684 VEFPIRDLDFSEFV---IKPQNDSAR--------ELYKYDLIAVSNHYGGLRDGHYTTFA 732
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 733 CNKDSGQWHYFDDSSVSPVTENQIESKAAYVLFYQ 767
>gi|119585372|gb|EAW64968.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_a
[Homo sapiens]
Length = 819
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + Y
Sbjct: 666 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPY------ 719
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 720 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 770
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 771 AYVLFYQRR 779
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 22/152 (14%)
Query: 26 GDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWF 85
G++ F+ ++++W+ R+ +HV+P M + V QF +Q D + L++
Sbjct: 206 GNTCFM-----NSALQQMWSGRD--AHVAPR-MFKTQVGRFAPQFSGYQQQDSQELLAFL 257
Query: 86 LNTLHRALNGTKKK-----------DSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLL 134
L+ LH LN KKK ++V K + +++ + + L+
Sbjct: 258 LDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVC 317
Query: 135 TEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
E K + T PF YLT P PL KD V+E
Sbjct: 318 PECAKVSVTFDPFCYLTL---PLPLKKDRVME 346
>gi|58259279|ref|XP_567052.1| ubiquitin-specific protease [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107425|ref|XP_777597.1| hypothetical protein CNBA7180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260291|gb|EAL22950.1| hypothetical protein CNBA7180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223189|gb|AAW41233.1| ubiquitin-specific protease, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1312
Score = 60.8 bits (146), Expect = 9e-07, Method: Composition-based stats.
Identities = 85/341 (24%), Positives = 137/341 (40%), Gaps = 44/341 (12%)
Query: 12 FLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQ 71
F R IN K P + L + + EL+R LW+ + +SP + + ++ QF
Sbjct: 984 FARSIN----KENPLGTKGELAKAWAELLRVLWSEK--YEFLSPMTFRKQITHFA-PQFL 1036
Query: 72 FTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEK---- 127
++Q D +FLS+ L+ LH LN K+K + +M PP E+
Sbjct: 1037 GSDQHDSQEFLSFVLDGLHEDLNRVKRKPPPVEMTPEREAM---LESAPPEVASEREWAI 1093
Query: 128 ----------------VRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQ 171
R RL +K + T F+Y++ LP P V++ +I +
Sbjct: 1094 YRQRNDSLIVDLFQGQYRNRLECLTCHKTSTTYDAFMYMS--LPVPSGKTKVVIQELIDE 1151
Query: 172 VNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRF-TKNTFFVEKNPTIV 230
++ K N KT + K I LPP L++ +KRF T++ F +K+ T V
Sbjct: 1152 FVKAEVMEKENAWYCPRCKTNRRAS-KTLTIARLPPVLLIQLKRFTTRDGLFWDKSETPV 1210
Query: 231 NFPVKNVDFGDILTPEVKAKYES-------TMYDLVKAKYESTMYDLVANIVHDGEPSNG 283
FP++ +D L + S +D +A+ YDL H G S+G
Sbjct: 1211 IFPIRGLDLTRYLPGPAGSSIGSGRQVGPDGTFD-PRAQVGPFKYDLYGVSNHMGTLSSG 1269
Query: 284 TYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
Y + K W +D V + + AYI Y+
Sbjct: 1270 HYTA--FVKSKEGWKYCEDSQVMPAQEKDVISRPAYILFYK 1308
>gi|194373951|dbj|BAG62288.1| unnamed protein product [Homo sapiens]
Length = 565
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 143/343 (41%), Gaps = 50/343 (14%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 241 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQ--YRYISP 294
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYK----TFLGS 111
+ + V QF Q D + L + ++ LH LN K D+ YK L
Sbjct: 295 KD-FKITVGKINDQFAGYSQQDSQELLLFLMDGLHEDLN---KADNRKRYKEENNDHLDD 350
Query: 112 MKVK----------TRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK 161
K I + + + + +K++ T F+YL+ LP K
Sbjct: 351 FKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLS--LPLASTSK 408
Query: 162 DEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTF 221
L++ + + LT NN + + + LK+ EI LPP L++++KRF+ +
Sbjct: 409 C-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGR 466
Query: 222 FVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP 280
+ +K T V+FP++N+D ++ P+ K Y+L + H G
Sbjct: 467 WKQKLQTSVDFPLENLDLSQYVIGPKNNLK----------------KYNLFSVSNHYGGL 510
Query: 281 SNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + +W++ D V+DI + + AYI Y
Sbjct: 511 DGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 553
>gi|426226105|ref|XP_004007194.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 20 [Ovis aries]
Length = 992
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 556 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPFLAKECTSQI--- 612
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 613 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 661
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 662 NAEAYVLFY 670
>gi|326668740|ref|XP_002662556.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Danio
rerio]
Length = 1009
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N + +K T+V+FP+++++ + +
Sbjct: 868 KKFDLWSLPRILVVHLKRFSYNRCWRDKLDTVVDFPIRDLNMSEFV-------------- 913
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
K + +YDL+A H G G Y + +K GKWY D V+ I
Sbjct: 914 -CDPKADPYIYDLIAVSNHYGGMGGGHYTAYGKNKADGKWYYFDDSSVSAATEDQIVTKA 972
Query: 318 AYIQIYELRTTPSPT 332
AY+ Y+ R +P+
Sbjct: 973 AYVLFYQRRDADTPS 987
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL +YFL + A + R P + + + +L++++W R+ S+V+P
Sbjct: 336 CLSNTPPLTEYFLEDRYEAEINRENPLGMRGEIAEAYADLVKQMWLSRS--SYVAPRTFK 393
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
V ++ QF +Q D + L++ L+ LH LN KKK IV K
Sbjct: 394 TQVGRFA-PQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLALRDAEGRPDEIVAKEA 452
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ I + L+ E K + T PF YLT P P+ KD +E
Sbjct: 453 WANHRLRNDSIIVDIFHGLFKSTLVCPECSKVSVTFDPFCYLTL---PLPMKKDRTME 507
>gi|324502429|gb|ADY41070.1| Ubiquitin carboxyl-terminal hydrolase 33 [Ascaris suum]
Length = 1035
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 13/133 (9%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K +IT LP L +++KRF + + K T V FPV ++D +T
Sbjct: 643 NGVKMCKITQLPEILCIHLKRFRHDASYSSKVSTSVTFPVCDLDLSPFVTQS-------- 694
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSN-GTYRVHLYHKGIGKWYEIQDLHVTDILPQMI 313
V+ + + T+YDL A + H G ++ G Y + ++ WYE D VT + +
Sbjct: 695 ----VRTQEKKTLYDLCAFVSHQGSTADSGHYLAYCRNEVDNNWYEFDDTIVTRLEVADV 750
Query: 314 TLTEAYIQIYELR 326
EAY+ Y+ R
Sbjct: 751 MGKEAYVLFYQRR 763
>gi|307177521|gb|EFN66632.1| Ubiquitin carboxyl-terminal hydrolase 2 [Camponotus floridanus]
Length = 762
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 125/336 (37%), Gaps = 33/336 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L + PL +Y L E A + L++ F +++ +LW HV L+
Sbjct: 440 CLSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIHELWEVGG--DHVVNTTALK 497
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK---------DSSIVYKTFLGS 111
+ + +F Q D +FL + L LH +N K DS + + S
Sbjct: 498 SQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTTKLPPIHGDIPDSYTDMQKAVES 557
Query: 112 MKVKTRKIPPVELE---EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENI 168
K R + ++ ++R L T + T PF L+ LP P L
Sbjct: 558 WKRYLRSEDSMIVDVFVGQLRSSLHCTSCDHVSVTLDPFWDLS--LPIPGRSGTVKLSQC 615
Query: 169 IPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPT 228
+ +L + + + + K F I P L++++KRF+ F K
Sbjct: 616 LEHFTREEVLDGDEKPTCSKCQ-MRRKCTKSFSIQKFPKILVIHLKRFSPMERFRGKLNV 674
Query: 229 IVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
+V+FP+ +D P V Y+L H G +G Y +
Sbjct: 675 MVDFPLTGLDLSAFAAPRVPG----------------CTYNLYGVANHSGTTYSGHYTAY 718
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
H G+W+E D V+ + + + +EAY+ YE
Sbjct: 719 CKHPYSGEWHEYNDSRVSVVSSRSVVSSEAYVLFYE 754
>gi|410036953|ref|XP_003950154.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Pan
troglodytes]
Length = 907
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + +
Sbjct: 754 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVC------------N 801
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y +YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 802 LSARPY---VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 858
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 859 AYVLFYQRR 867
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 264 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 320
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 321 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 380
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 381 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 435
>gi|343961659|dbj|BAK62419.1| ubiquitin carboxyl-terminal hydrolase 4 [Pan troglodytes]
Length = 907
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + +
Sbjct: 754 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVC------------N 801
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
L Y +YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 802 LSARPY---VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 858
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 859 AYVLFYQRR 867
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 264 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 320
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 321 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 380
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 381 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 435
>gi|195029733|ref|XP_001987726.1| GH19806 [Drosophila grimshawi]
gi|193903726|gb|EDW02593.1| GH19806 [Drosophila grimshawi]
Length = 920
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 22/163 (13%)
Query: 170 PQVNLYTILTKFNNESE----KEYKTYKENFL----KRFEITSLPPYLILYVKRFTKNTF 221
P V LY + F + E Y + N L K + +LP L +++KRF +
Sbjct: 337 PSVTLYDCMASFFSADELKGDNMYSCERCNKLRTGIKYSRVLNLPEVLCIHLKRFRHDLS 396
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
+ K + V FP++ D E K+ LV Y+L + I H G
Sbjct: 397 YSSKISSHVYFPLEGFDMRPYQHKECKS--------LVPT------YNLCSVICHHGTVG 442
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
G Y + + G+WYE D HVT++ P ++ +AY+ Y+
Sbjct: 443 GGHYTCYARNTLNGRWYEFDDQHVTEVTPDVVQNCQAYVLFYQ 485
>gi|47213596|emb|CAG07262.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1000
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+ ++ SLP LI+++KRF+ F EK ++V+FP++N+DF L +
Sbjct: 791 KKLDLWSLPEVLIIHLKRFSYTKFTREKLESVVDFPLRNLDFSGFL-----------LRK 839
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVT 306
V ++ + YDL+A H G +G Y + HK +WY D VT
Sbjct: 840 NVPSQEPPSRYDLIAVSNHYGGLRDGHYTSYARHKDNAQWYYFDDSKVT 888
>gi|189238741|ref|XP_972079.2| PREDICTED: similar to AGAP003821-PA [Tribolium castaneum]
Length = 928
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 24/162 (14%)
Query: 170 PQVNLYTILTKF--------NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTF 221
P V L+ L F +N E N +K ++ LP L +++KRF
Sbjct: 469 PVVTLHDCLAAFFSTDELKGDNMYSCEKCNKLRNGIKFSKVLQLPEVLCIHLKRFRHELM 528
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
F K + V+FP+K +D L + +K T Y+L + I H G
Sbjct: 529 FSSKISSAVSFPLKGLDMRPYLHTDCISKV--------------TTYELFSVICHYGTAG 574
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + G+WYE D +VT + P+ + EAY+ Y
Sbjct: 575 GGHYICYALNG--GQWYEFDDQYVTRVPPEKVQSCEAYVLFY 614
>gi|449471572|ref|XP_002196987.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Taeniopygia guttata]
Length = 343
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 116/340 (34%), Gaps = 59/340 (17%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
LC +TPL YFL + + G+S+ FG L+ +W + +VSP E
Sbjct: 41 CLCSLTPLVQYFLSGKWNTDLHQEIGESA----TAFGCLVSDMWLGKF--DYVSP-EAFH 93
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALN--------------GTKKKDSS---I 103
+V F Q D +FL L+ LH A G + SS I
Sbjct: 94 SVFGKRYPAFSRRTQHDAQEFLICVLDDLHEAFKEVRAQLQERQSPAAGASTRSSSGTSI 153
Query: 104 VYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDE 163
+ F G + R + L ++ +L+ T S L C P L
Sbjct: 154 ITHLFEGQLSYGIRCLTCKTLSDRPESFTILSLPIPSTRVCSLQDCLECFFQPDTL---- 209
Query: 164 VLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFV 223
+NN+ ++ + IT P +I ++KRF
Sbjct: 210 ----------------TWNNQIRCHRCGSNQDATVKASITKAPQIIIFHLKRFAWQDKHR 253
Query: 224 EKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNG 283
K T V +P ++D L+P + +T T Y L A + H G+ G
Sbjct: 254 RKLSTTVCYPFSHLD----LSPYISTSCHNT-----------TEYSLCAVVNHAGDLDYG 298
Query: 284 TYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
Y H WY D VT I + AY+ Y
Sbjct: 299 HYTAFCKHSITKHWYSFDDDQVTKIPDSAVQADTAYLLFY 338
>gi|340502542|gb|EGR29222.1| ubiquitin carboxyl-terminal hydrolase family protein, putative
[Ichthyophthirius multifiliis]
Length = 669
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 129/306 (42%), Gaps = 33/306 (10%)
Query: 36 FGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNG 95
F +L+ ++W ++ + P E++Q V K+F+ DP DF F+N LH
Sbjct: 70 FSKLVDQIWQGQH--RALKPLELVQ-VFYQIEKRFKGYGFKDPYDFFKQFVNILHDDFKY 126
Query: 96 TKKKDSSI-----VYKTFLGSMKVKTR-------KIPPVELEEKVRQRLLLTEEYKETET 143
K + V K+FL + I + K+ R+ T+ +
Sbjct: 127 ISSKAYDMKRNTPVCKSFLEEWDIINNIKNYTDYSIISSSFKGKLCARVKCTQCNQIYWC 186
Query: 144 ESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEY-KTYKENFL--KRF 200
E F+ ++ D+P +V PQ++ Y L N ++ Y + K+ + K +
Sbjct: 187 EEDFMGISLDIPQKGFLYKKVQN---PQIHKYLFLFLKNKQTISFYCEQCKDQVIIEKTY 243
Query: 201 EITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVK 260
+LP L ++++RF + F +KN T++ FP+ ++F + + Y+ +
Sbjct: 244 TFLTLPNILCIHLQRFKEKAF--QKNKTVIEFPINQLEFSHFIKVYIFNSYDQKL----- 296
Query: 261 AKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYI 320
T ++L+ I H+ Y + + G +Y+ D +V I ++ E YI
Sbjct: 297 -----TQFELLGLIEHEQSQGGDHYSTIVRNNKNGLFYKYMDDNVKVIDQNLVQECEPYI 351
Query: 321 QIYELR 326
Y+L+
Sbjct: 352 LFYKLK 357
>gi|340375672|ref|XP_003386358.1| PREDICTED: hypothetical protein LOC100638851 [Amphimedon
queenslandica]
Length = 1002
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 128/351 (36%), Gaps = 59/351 (16%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
+ H T L DYFL K+ PG SS ++ + ++ +W P+ V P ++
Sbjct: 679 CVSHTTKLTDYFLS----GEAKKEPGYSS-KIIGAYNSFLKDMWMPKENTKAVLPRR-IR 732
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRK-- 118
A + S Q Q D +FL + L LH +N K L S + K K
Sbjct: 733 AALTPSIDILQENGQEDAQEFLQYLLPCLHDHIN-----------KPPLDSPRTKALKRN 781
Query: 119 ------IPPVELEE-------------KVRQRLLLTEEYKETETESPFLYLTCDLPPPPL 159
PPV + + + L + + + + F L+ LP L
Sbjct: 782 NGLISITPPVPISSEFMKSCFSELFMGQTKSSLTCHKCSRTSSSVESFWNLSLPLPTKGL 841
Query: 160 FKDEVLENIIPQVNLYTILTKFNNESEKEYKTYK--ENFLKRFEITSLPPYLILYVKRFT 217
F V + L+ K E+ +NF K+ E+ P IL++KRF+
Sbjct: 842 FSKYVSFTLSDCFRLFAAEEKLIKENRPRCSKCGTLQNFSKKLEVQKFPESFILHLKRFS 901
Query: 218 KNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD 277
+ K + V P + E+ A ES +S Y+L I H
Sbjct: 902 FQDGHLVKLTSAVKVPT------TLSVKEIAADKESA---------KSFYYELYGVIHHS 946
Query: 278 GEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITL--TEAYIQIYELR 326
G G Y+ H GKWY D V+ IT+ + Y+ YE +
Sbjct: 947 GYLDGGHYQADCKHN--GKWYNFNDDIVSKKSTAEITVPSSSPYLLFYEKK 995
>gi|348507904|ref|XP_003441495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like
[Oreochromis niloticus]
Length = 997
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 15/135 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N + +K T+V+FP+++++ + + Y
Sbjct: 856 KKFDLWSLPRILVVHLKRFSYNRCWRDKLDTVVDFPIRDLNMSEFVCDPKAGPY------ 909
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D V+ I
Sbjct: 910 ---------IYDLIAVSNHYGGMGGGHYTAYGKNKVDGKWYYFDDSSVSSATEDQIVTKA 960
Query: 318 AYIQIYELRTTPSPT 332
AY+ Y+ R SP+
Sbjct: 961 AYVLFYQRRDEESPS 975
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + +PL +YFL + A + R P + + + +L++++W R+ S+V+P
Sbjct: 333 CLSNASPLTEYFLTDQYEAEINRENPLGMRGEIAEAYADLVKQMWLSRS--SYVAPRTFK 390
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
V ++ QF +Q D + L++ L+ LH LN KKK IV K
Sbjct: 391 TQVGRFA-PQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLALRDAEGRPDEIVAKEA 449
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ I + L+ E K + T PF YLT P PL KD +E
Sbjct: 450 WTNHRLRNDSIIVDIFHGLFKSTLVCPECSKVSVTFDPFCYLTL---PLPLKKDRTME 504
>gi|393240409|gb|EJD47935.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 1128
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 71/317 (22%), Positives = 132/317 (41%), Gaps = 34/317 (10%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
L F L+ ++W+ + SP+ + V ++ QF +EQ D +FLS L+ LH
Sbjct: 817 LASAFATLLHEMWHGD--LPYRSPYAFRKTVCAFA-TQFNNSEQHDCQEFLSALLDGLHE 873
Query: 92 ALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEE------------------KVRQRLL 133
LN K + V T +++T + +E + R R+
Sbjct: 874 DLNRIIAKPN--VETTPEREAELETLAVQIASEQEWQIYQMRDDSLIVDYFQGQFRNRVQ 931
Query: 134 LTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYK 193
+K + T + F+YL+ +P L + ++ + N + K +
Sbjct: 932 CLTCHKTSTTYNSFMYLSLPIPAGRGVNKVTLNQCLDHFVREEVIDRENAWNCPNCKCPR 991
Query: 194 ENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEV------ 247
+ ++ LPP L++++KRF+ F +K T+V+FP + +D + + P +
Sbjct: 992 RA-TTQLSLSRLPPVLLIHLKRFSVKGPFTDKLETVVDFPQRGLDLTNYMPPPLPPGTAR 1050
Query: 248 KAKYESTM-YDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVT 306
A+ + + D + + YDL A H G + G Y + + G W D ++
Sbjct: 1051 PARAGAPLRTDDPRIQVPPYKYDLYAVTNHYGTLTGGHYTALIASR--GTWLHCDDSRIS 1108
Query: 307 DILPQMITLTEAYIQIY 323
+ PQ +T T AY+ Y
Sbjct: 1109 EADPQSLT-TRAYVLFY 1124
>gi|348553563|ref|XP_003462596.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like isoform 2
[Cavia porcellus]
Length = 929
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ + F EK T+
Sbjct: 752 IELFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEILIIHLKRFSFSKFSHEKLDTL 811
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V+FP++++DF + + +K + ES E YDL+A H G +G Y
Sbjct: 812 VHFPIRDLDFSEFV---IKPQNESAP--------ELYKYDLIAVSNHYGGIRDGHYTTFA 860
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 861 CNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 895
>gi|348553561|ref|XP_003462595.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like isoform 1
[Cavia porcellus]
Length = 956
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ + F EK T+
Sbjct: 779 IELFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEILIIHLKRFSFSKFSHEKLDTL 838
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V+FP++++DF + + +K + ES E YDL+A H G +G Y
Sbjct: 839 VHFPIRDLDFSEFV---IKPQNESAP--------ELYKYDLIAVSNHYGGIRDGHYTTFA 887
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 888 CNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 922
>gi|308081762|ref|NP_001183969.1| ubiquitin carboxyl-terminal hydrolase 11 [Canis lupus familiaris]
Length = 770
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ T K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 592 IELFTTVETLEKENPWFCPTCKQHQLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTL 651
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K + ES E YDL+A H G +G Y
Sbjct: 652 VEFPIRDLDFSEFV---IKPQNESAP--------ELYKYDLIAVSNHYGGLRDGHYTTFA 700
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 701 CNKDSGQWHYFDDNSVSPVTENQIESKAAYVLFYQ 735
>gi|126297738|ref|XP_001364410.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Monodelphis
domestica]
Length = 908
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 562 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLQPFLAKECVSQI--- 618
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 619 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 667
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 668 NAEAYVLFY 676
>gi|326926643|ref|XP_003209508.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Meleagris
gallopavo]
Length = 1124
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 146/345 (42%), Gaps = 54/345 (15%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFL-----LVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L +YF R + + + R S+FL + + FG +M+ LW + +K ++SP
Sbjct: 800 CLCNAPHLAEYFNRNLYHDDINR----SNFLGHKGEVAEEFGVIMKALWTGQ-YK-YISP 853
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYK----TFLGS 111
+ + + QF Q D + L + ++ LH LN K D+ YK L
Sbjct: 854 KD-FKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLN---KADNRKRYKEENNDHLDD 909
Query: 112 MKVK----------TRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK 161
++ I + + + + +K++ T F+YL+ LP K
Sbjct: 910 LRAAELAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLS--LPLASTSK 967
Query: 162 DEVLENIIPQVNLYTILTKF--NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKN 219
+ E + L++ K NN + + + LK+ EI LPP L++++KRF+ +
Sbjct: 968 CTLQECL----RLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYD 1023
Query: 220 TFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG 278
+ +K T V+FP++ +D ++ P+ K Y+L + H G
Sbjct: 1024 GRWKQKLQTSVDFPLETLDLSQYVIGPKNNLK----------------RYNLFSVSNHYG 1067
Query: 279 EPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + +W++ D V++I + + AYI Y
Sbjct: 1068 GLDGGHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFY 1112
>gi|62027426|gb|AAH92078.1| Usp8 protein, partial [Mus musculus]
Length = 419
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 139/340 (40%), Gaps = 44/340 (12%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 95 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQ--YRYISP 148
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIV 104
+ + + QF + Q D + L + ++ LH LN + D
Sbjct: 149 KD-FKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNEHLDDLQA 207
Query: 105 YKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEV 164
+ K I + + + + + + T F+YL+ LP K
Sbjct: 208 AEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCRRRSRTFEAFMYLS--LPLASTSKC-T 264
Query: 165 LENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVE 224
L++ + + LT NN + + + LK+ EI LPP L++++KRF+ + + +
Sbjct: 265 LQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 323
Query: 225 KNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNG 283
K T V+FP++N+D ++ P+ K Y+L + H G G
Sbjct: 324 KLQTSVDFPLENLDLSQYVIGPKNSLK----------------KYNLFSVSNHYGGLDGG 367
Query: 284 TYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
Y + + +W++ D V+DI + + AYI Y
Sbjct: 368 HYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 407
>gi|320162607|gb|EFW39506.1| hypothetical protein CAOG_00031 [Capsaspora owczarzaki ATCC 30864]
Length = 1105
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 14/127 (11%)
Query: 197 LKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMY 256
LK + LP L L++KRF +++ K V FP++ +D L P
Sbjct: 769 LKTLSVHVLPEVLCLHIKRFRHDSYLSSKLSQPVQFPLEGLDMRPFLAP----------- 817
Query: 257 DLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLT 316
+ +T+Y L A + H G ++G Y + H G+W+E D T++ Q +
Sbjct: 818 ---GSTETNTLYTLNAVVSHRGGVNSGHYVAYAQHPQSGRWFEYDDSDTTEVSVQDVLDQ 874
Query: 317 EAYIQIY 323
EAYI Y
Sbjct: 875 EAYILFY 881
>gi|432118440|gb|ELK38094.1| Ubiquitin carboxyl-terminal hydrolase 11 [Myotis davidii]
Length = 379
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 11/133 (8%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+ ++ +LP LI+++KRF+ F EK T+V FP++++DF + + +K + ES
Sbjct: 230 KKLDLWALPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFV---IKPQDESAP-- 284
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
E YDL+A H G +G Y +K G+W+ D V+ + I
Sbjct: 285 ------ELYKYDLIAVSNHYGGLRDGHYTTFACNKDSGQWHYFDDNSVSPVAENQIESKA 338
Query: 318 AYIQIYELRTTPS 330
AY+ Y+ + S
Sbjct: 339 AYVLFYQRQDVAS 351
>gi|432857080|ref|XP_004068528.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Oryzias
latipes]
Length = 998
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N + +K T+V+FP+++++ + + + Y
Sbjct: 857 KKFDLWSLPRILVVHLKRFSYNRCWRDKLDTVVDFPIRDLNMSEFVCDPKASPY------ 910
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D V+ I
Sbjct: 911 ---------IYDLIAVSNHYGGMGGGHYTAYAKNKLDGKWYYFDDSSVSSATDDQIVTKA 961
Query: 318 AYIQIYELRTTPSPT 332
AY+ Y+ R +P+
Sbjct: 962 AYVLFYQRRDEDAPS 976
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL +YFL + A + R P + + + +L++++W R+ S+V+P
Sbjct: 338 CLSNAPPLTEYFLDDQYEAEINRENPLGMRGEIAEAYADLVKQMWLSRS--SYVAPRTFK 395
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
V ++ QF +Q D + L++ L+ LH LN KKK + IV K
Sbjct: 396 TQVGRFA-PQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLALRDAEGREDEIVAKEA 454
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ K + T PF YLT P P+ KD +E
Sbjct: 455 WKNHRLRNDSVIVDIFHGLFKSTLVCPVCSKVSVTFDPFCYLTL---PLPMKKDRTME 509
>gi|224066024|ref|XP_002192515.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Taeniopygia
guttata]
Length = 904
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 15/138 (10%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ + ++ +K T+V FP++ ++ + + Y
Sbjct: 770 KKFDLWSLPRILVVHLKRFSYSRYWRDKLDTVVEFPIRGLNMSEFVCDPRAGSY------ 823
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K KWY D V+ I
Sbjct: 824 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKVNNKWYYFDDSSVSVASEDQIVTKA 874
Query: 318 AYIQIYELRTTPSPTAMS 335
AY+ YE R + +A S
Sbjct: 875 AYVLFYERRNSEEHSAPS 892
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARV-KRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL + A + + P + + + +L++++W+ R +SHV+P M
Sbjct: 284 CLSNTPPLTDYFLEDKYEAEINQNNPLGMRGEIAEAYADLIKQMWSGR--QSHVAPR-MF 340
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK S V K
Sbjct: 341 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSEVAKEA 400
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ I + L+ + K + T PF YLT P PL +D +E
Sbjct: 401 WENHRLRNDSIIVDIFHGLFKSTLVCPKCSKVSVTFDPFCYLTL---PLPLRRDRPME 455
>gi|322801296|gb|EFZ21983.1| hypothetical protein SINV_10772 [Solenopsis invicta]
Length = 886
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 127/342 (37%), Gaps = 33/342 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L + PL +Y L E A + L++ F +++ +LW HV L+
Sbjct: 564 CLSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIHELWEVGG--DHVVNTTALK 621
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK---------DSSIVYKTFLGS 111
+ + +F Q D +FL + L LH +N K DS + + S
Sbjct: 622 SQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTTKLPPIHGDIPDSYTDMQKAVES 681
Query: 112 MKVKTRKIPPVELE---EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENI 168
K R ++ ++R L T + T PF L+ LP P L
Sbjct: 682 WKRYLRSEDSTIVDVFVGQLRSSLRCTSCDHVSVTLDPFWDLS--LPIPARSGTVKLSQC 739
Query: 169 IPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPT 228
+ +L + + + + K F I P L++++KRF+ F K
Sbjct: 740 LEHFTREEVLDGDEKPTCSKCQ-MRRKCTKSFSIQKFPKILVIHLKRFSPMERFRGKLNV 798
Query: 229 IVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
+V+FP+ +D P V Y+L H G +G Y +
Sbjct: 799 MVDFPLTGLDLSAFAAPRVPG----------------CTYNLYGVANHSGTTYSGHYTAY 842
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPS 330
H G+W+E D V+ + + + +EAY+ YE ++ S
Sbjct: 843 CKHPYSGEWHEYNDSRVSVVSSRSVVSSEAYVLFYEQQSHSS 884
>gi|432884788|ref|XP_004074587.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Oryzias
latipes]
Length = 926
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 582 NGIKYCKVLKLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDMRPFLAKESPSQV--- 638
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 639 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 687
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 688 NAEAYVLFY 696
>gi|431917785|gb|ELK17027.1| Ubiquitin carboxyl-terminal hydrolase 11 [Pteropus alecto]
Length = 881
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+ ++ LP LI+++KRF+ F EK T+V FP++++DF + + +K + ES
Sbjct: 731 KKLDLWKLPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSEFV---IKPQNESAP-- 785
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
E YDL+A H G +G Y +K G+W+ D V+ + I
Sbjct: 786 ------ELYKYDLIAVSNHYGGLRDGHYTTFACNKDSGQWHYFDDNSVSPVTENQIESKA 839
Query: 318 AYIQIYE 324
AY+ Y+
Sbjct: 840 AYVLFYQ 846
>gi|340717430|ref|XP_003397185.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Bombus
terrestris]
Length = 996
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 131/298 (43%), Gaps = 25/298 (8%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
+V+ ++++ LW + +KS +SPH++ AV + + QF+ EQ D +FL++ L+ +H
Sbjct: 710 VVEEVAQVIKALWRGQ-YKS-ISPHDLKIAVGQY-KLQFESYEQQDSHEFLTFLLDWMHN 766
Query: 92 ALNGTKKK--DSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLY 149
L K + ++ K + +M + I + + +R + + + + T F
Sbjct: 767 DLKKNCKVPLEMTVAEKAWDKAMDSQKSIISDLFFGQ-LRSTITCSFCKQSSTTYEIFNS 825
Query: 150 LTCDLPPP--PLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPP 207
LT LP D +L+ + Q + K E K+F+ L P
Sbjct: 826 LTMSLPHANRCTLNDCILKFVSGQKVIGWKCPKCQTPREA---------TKKFDFVKLAP 876
Query: 208 YLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTM 267
+++++ RF ++ ++EK T V+FP+ DF L P + A S +++ S
Sbjct: 877 IIVIHLNRFAESGGWLEKRNTAVDFPL--TDFN--LKPYLVADSSSATISNIRSYNYS-- 930
Query: 268 YDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITL--TEAYIQIY 323
Y L A H G G Y + KWY+ D VT++ + T AY+ Y
Sbjct: 931 YSLYAMSNHYGTMEGGHYTAFCKNATQNKWYKYDDQTVTEVTVNQVRSQNTNAYLLFY 988
>gi|350404719|ref|XP_003487196.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
impatiens]
Length = 541
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 124/328 (37%), Gaps = 53/328 (16%)
Query: 19 ARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSH----VSPHEMLQAVVLWSRKQFQFTE 74
R+ P F+ E +RK+ N +SP E L V+ +F+ +
Sbjct: 233 GRIVTPGRAKEFMSDALLAEELRKVLLGLNLGGSNGQAISP-ECLFLVIWKVVPRFRGYQ 291
Query: 75 QSDPIDFLSWFLNTLHRALN-----------GTKKKDSSIVYKTFLGSMKVKTRKIPPVE 123
Q D +FL++ L+ LH L G + K SIV F G++ +
Sbjct: 292 QQDAHEFLTYMLDRLHTELLQLLPRLGHEPLGLRGK-QSIVTAVFGGTL---------LS 341
Query: 124 LEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNN 183
+ + R +++T PF L+ D+P + + E + Y++ F
Sbjct: 342 VVHCMNCR-------TDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLT--YSLTRFFKV 392
Query: 184 ESEKEYKTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKN 236
E + + Y K+ KRF I LP L L++KRF + K T V+FP+K+
Sbjct: 393 EELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKS 452
Query: 237 VDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSN-GTYRVHLYHKGIG 295
+D V S +YDL A IVH G + G Y H G
Sbjct: 453 LDMSAFTVRGVSGTK--------LGASNSHLYDLAAVIVHHGSGAGTGHYTAFAVHD--G 502
Query: 296 KWYEIQDLHVTDILPQMITLTEAYIQIY 323
+W+ D V + + YI Y
Sbjct: 503 QWFHFNDSSVRPATTDAVAKCKPYILFY 530
>gi|195498419|ref|XP_002096515.1| GE25711 [Drosophila yakuba]
gi|194182616|gb|EDW96227.1| GE25711 [Drosophila yakuba]
Length = 895
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 129/316 (40%), Gaps = 63/316 (19%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
+++ L+++LWN + +K S L+ VV +K F+ +Q D +FL+ ++ LH
Sbjct: 609 VIEEVAALIKELWNGQ-YKCVASRD--LRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHS 665
Query: 92 ALNG--------------------TKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQR 131
L TK K+S I++ F G MK + +
Sbjct: 666 DLQTLHVPRQREMISASEKAWLEFTKAKESMILH-LFYGQMKSTVKCVVC---------- 714
Query: 132 LLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKT 191
+KE+ T F L+ +LPP + + + +++Y + + + KT
Sbjct: 715 ------HKESATYESFSNLSLELPP-----NSNVCQLNQCMDMYFSGERIHGWNCPNCKT 763
Query: 192 YKENFLKRFEITSLPPYLILYVKRF---TKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEV 247
K + +K+ +I+ LPP +++++KRF N+ K + FP++N+D I E
Sbjct: 764 -KRDAIKKLDISKLPPVMVVHLKRFYADPSNSGAYMKKQNYLRFPLENLDMNPYIARAES 822
Query: 248 KAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTD 307
+A T Y L A H G G Y GKW++ D V+
Sbjct: 823 RAVTPKT-------------YQLYAVSNHYGTMEGGHYTAFCKSANYGKWFKFDDQVVSA 869
Query: 308 ILPQMITLTEAYIQIY 323
+ + + AYI Y
Sbjct: 870 LDSSNVVSSAAYILFY 885
>gi|395331753|gb|EJF64133.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 1301
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTP-EVKAKYESTMY 256
KRF++ +P L++++KRF+ + +K T V+FP++ +D ++ V + + T
Sbjct: 971 KRFDLWKVPDILVVHLKRFSNSRMLRDKIDTFVDFPLEGLDLTSMVGERSVGKRLQETGV 1030
Query: 257 DLVKAKY----ESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQM 312
D+ E +YDL A H G G YR + + GKWY D +VT P+
Sbjct: 1031 DVESLGLHDLEEPLVYDLFAVDEHLGGLGGGHYRAYALNHATGKWYHFDDSYVTPARPEQ 1090
Query: 313 ITLTEAYIQIYELRT 327
+ AY+ Y RT
Sbjct: 1091 AVNSNAYLLFYRRRT 1105
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 22/183 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVK--RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEM 58
L H L DYFL + + P G S + Q FG ++ ++W+ + S +P E
Sbjct: 424 CLVHTPELVDYFLTGVYQEELNPDNPLGMHS-AIAQAFGAMLTRIWDNESTLSSYTPREF 482
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALN---------------GTKKKDSSI 103
Q + ++ QF +Q D + +++ L+ LH LN G K+ +
Sbjct: 483 KQTLQRFA-PQFSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYVEKPDWEGGGDKELVEL 541
Query: 104 VYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETE-TESPFLYLTCDLPPPPLFKD 162
++ G MK + V+L + Q L+ E + T PF+YLT LP ++
Sbjct: 542 ANLSWEGYMKRNDSVV--VDLFQGQYQSTLVCPECNKVSITFDPFMYLTLPLPVQKKWQH 599
Query: 163 EVL 165
++L
Sbjct: 600 DIL 602
>gi|431898903|gb|ELK07273.1| Ubiquitin carboxyl-terminal hydrolase 20 [Pteropus alecto]
Length = 889
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 567 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPFLAKECTSQI--- 623
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
+ YDL++ I H G +G Y + + G+WYE D +VT + ++
Sbjct: 624 -----------STYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTKVHETVVQ 672
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 673 SAEAYVLFY 681
>gi|426340532|ref|XP_004034183.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Gorilla gorilla gorilla]
Length = 633
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAP-RMF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 490
>gi|47086035|ref|NP_998392.1| ubiquitin carboxyl-terminal hydrolase 33 [Danio rerio]
gi|46362501|gb|AAH66557.1| Ubiquitin specific peptidase 33 [Danio rerio]
Length = 897
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 14/130 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ SLP L +++KRF F K T V+FP++ ++ L AK S
Sbjct: 553 NGVKFCKVQSLPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLEMQPFL-----AKDSSA 607
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
+ +T YDL++ I H G S+G Y + ++ WYE D VT++ +
Sbjct: 608 L---------TTTYDLLSVICHHGTASSGHYIAYCRNELNQLWYEFDDQSVTEVSESCVQ 658
Query: 315 LTEAYIQIYE 324
EAY+ Y+
Sbjct: 659 NAEAYVLFYK 668
>gi|66501571|ref|XP_392160.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Apis
mellifera]
Length = 541
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 124/328 (37%), Gaps = 53/328 (16%)
Query: 19 ARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSH----VSPHEMLQAVVLWSRKQFQFTE 74
R+ P F+ E +RK+ N +SP E L V+ +F+ +
Sbjct: 233 GRIVTPGRAKEFMSDALLAEELRKVLLGLNLGGSNGQAISP-ECLFLVIWKVVPRFRGYQ 291
Query: 75 QSDPIDFLSWFLNTLHRALN-----------GTKKKDSSIVYKTFLGSMKVKTRKIPPVE 123
Q D +FL++ L+ LH L G + K SIV F G++ +
Sbjct: 292 QQDAHEFLTYMLDRLHTELLQLLPRLGHEPLGLRGK-QSIVTAVFGGTL---------LS 341
Query: 124 LEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNN 183
+ + R +++T PF L+ D+P + + E + Y++ F
Sbjct: 342 VVHCMNCR-------TDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLT--YSLTRFFKV 392
Query: 184 ESEKEYKTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKN 236
E + + Y K+ KRF I LP L L++KRF + K T V+FP+K+
Sbjct: 393 EELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKS 452
Query: 237 VDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSN-GTYRVHLYHKGIG 295
+D V S +YDL A IVH G + G Y H G
Sbjct: 453 LDMSAFTVRGVNGTK--------LGASNSHLYDLAAVIVHHGSGAGTGHYTAFAVHD--G 502
Query: 296 KWYEIQDLHVTDILPQMITLTEAYIQIY 323
+W+ D V + + YI Y
Sbjct: 503 QWFHFNDSSVRPATTDAVAKCKPYILFY 530
>gi|405118112|gb|AFR92887.1| ubiquitin-specific protease [Cryptococcus neoformans var. grubii H99]
Length = 1246
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 141/345 (40%), Gaps = 44/345 (12%)
Query: 8 LRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSR 67
L F R IN K P + L + + EL+R LW+ + +SP + + ++
Sbjct: 914 LDGTFARSIN----KENPLGTKGELAKAWAELLRVLWSEK--YEFLSPMTFRKQITHFA- 966
Query: 68 KQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP------ 121
QF ++Q D +FLS+ L+ LH LN K+K + +M PP
Sbjct: 967 PQFLGSDQHDSQEFLSFVLDGLHEDLNRIKRKPPPVEMTPEREAM---LESAPPEVASER 1023
Query: 122 -------------VEL-EEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLEN 167
V+L + + R RL +K + T F+Y++ LP P V++
Sbjct: 1024 EWAIYRQRNDSLIVDLFQGQYRNRLECLTCHKTSTTYDAFMYMS--LPVPSGKTKVVIQE 1081
Query: 168 IIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRF-TKNTFFVEKN 226
+I + ++ K N KT + K I LPP L++ +KRF T++ F +K+
Sbjct: 1082 LIDEFVKAEVMEKENAWYCPRCKTNRRAS-KTLTIARLPPVLLIQLKRFTTRDGLFWDKS 1140
Query: 227 PTIVNFPVKNVDFGDILTPEVKAKYES-------TMYDLVKAKYESTMYDLVANIVHDGE 279
T V FP++ +D L + S +D +A+ YDL H G
Sbjct: 1141 ETPVIFPIRGLDLTRYLPGPAGSSIGSGRQVGPDGTFD-PRAQVGPFKYDLYGVSNHMGT 1199
Query: 280 PSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
S+G Y + K W +D V + + AYI Y+
Sbjct: 1200 LSSGHYTAFVKSK--EGWKYCEDSQVMPAQEKDVISRPAYILFYK 1242
>gi|57524946|ref|NP_001006134.1| ubiquitin carboxyl-terminal hydrolase 4 [Gallus gallus]
gi|53131277|emb|CAG31805.1| hypothetical protein RCJMB04_11i7 [Gallus gallus]
Length = 964
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 20/139 (14%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ + ++ +K T+V FP++ ++ + + Y
Sbjct: 830 KKFDLWSLPKILVVHLKRFSYSRYWRDKLDTVVEFPIRGLNMSEFVCDPRGGSY------ 883
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K G+WY D V+ I
Sbjct: 884 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKVNGEWYYFDDSSVSLASEDQIVTKA 934
Query: 318 AYIQIYELR-----TTPSP 331
AY+ Y+ R PSP
Sbjct: 935 AYVLFYQRRDNEEHVAPSP 953
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 26/182 (14%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
L + PL DYFL EIN++ G+ + + + EL++++W+ R +SHV+P
Sbjct: 344 CLSNTPPLTDYFLEDKYEAEINHSNPLGMRGE----IAEAYAELIKQIWSGR--QSHVAP 397
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIV 104
M + V QF +Q D + L++ L+ LH LN KKK S+V
Sbjct: 398 R-MFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSVV 456
Query: 105 YKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEV 164
K + +++ I + L+ + K + T PF YLT P PL +D +
Sbjct: 457 AKEAWENHRLRNDSIIVDIFHGLFKSTLVCPKCSKVSVTFDPFCYLTL---PLPLKRDRL 513
Query: 165 LE 166
LE
Sbjct: 514 LE 515
>gi|380013085|ref|XP_003690600.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Apis
florea]
Length = 542
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 124/328 (37%), Gaps = 53/328 (16%)
Query: 19 ARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSH----VSPHEMLQAVVLWSRKQFQFTE 74
R+ P F+ E +RK+ N +SP E L V+ +F+ +
Sbjct: 234 GRIVTPGRAKEFMSDALLAEELRKVLLGLNLGGSNGQAISP-ECLFLVIWKVVPRFRGYQ 292
Query: 75 QSDPIDFLSWFLNTLHRALN-----------GTKKKDSSIVYKTFLGSMKVKTRKIPPVE 123
Q D +FL++ L+ LH L G + K SIV F G++ +
Sbjct: 293 QQDAHEFLTYMLDRLHTELLQLLPRLGHEPLGLRGK-QSIVTAVFGGTL---------LS 342
Query: 124 LEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNN 183
+ + R +++T PF L+ D+P + + E + Y++ F
Sbjct: 343 VVHCMNCR-------TDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLT--YSLTRFFKV 393
Query: 184 ESEKEYKTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKN 236
E + + Y K+ KRF I LP L L++KRF + K T V+FP+K+
Sbjct: 394 EELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKS 453
Query: 237 VDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSN-GTYRVHLYHKGIG 295
+D V S +YDL A IVH G + G Y H G
Sbjct: 454 LDMSAFTVRGVNGTK--------LGASNSHLYDLAAVIVHHGSGAGTGHYTAFAVHD--G 503
Query: 296 KWYEIQDLHVTDILPQMITLTEAYIQIY 323
+W+ D V + + YI Y
Sbjct: 504 QWFHFNDSSVRPATTDAVAKCKPYILFY 531
>gi|195392830|ref|XP_002055057.1| GJ19166 [Drosophila virilis]
gi|194149567|gb|EDW65258.1| GJ19166 [Drosophila virilis]
Length = 938
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 124/319 (38%), Gaps = 65/319 (20%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
++ F +L++++W N S V+P E+ +A R + +Q D +FL +FL++LH
Sbjct: 657 ILHEFAKLIQEMWTT-NVHS-VTPMELKRAFSTKHRMYSDYNQQ-DAQEFLRFFLDSLHS 713
Query: 92 ALN---------------GTKKKD----------SSIVYKTFLGSMKVKTRKIPPVELEE 126
ALN KK D +S++ F+G +K
Sbjct: 714 ALNTGVKGETLNIDDNLSDNKKADLTWEWYARHENSLIRDLFVGQLK------------- 760
Query: 127 KVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE 186
L T + T PF L+ LP K E ++ + +L +
Sbjct: 761 ---STLKCTTCGNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIR---EEVLDGDEMPTC 814
Query: 187 KEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPE 246
+ KT ++ K F I P YL++++KRF++ + K IV FP
Sbjct: 815 SKCKTRRK-CTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFPT------------ 859
Query: 247 VKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVT 306
A E M + Y L A H G + G Y H KW+E D V+
Sbjct: 860 --ADRELNMASYGANANSNVHYSLYAISNHMGSTAGGHYVALCKHPVSHKWHEFNDNSVS 917
Query: 307 DILPQ-MITLTEAYIQIYE 324
D +P+ + + AYI YE
Sbjct: 918 DAIPENCLVSSSAYILFYE 936
>gi|281312481|sp|A5PMR2.1|UBP33_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
Length = 897
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 14/130 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ SLP L +++KRF F K T V+FP++ ++ L AK S
Sbjct: 553 NGVKFCKVQSLPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLEMQPFL-----AKDSSA 607
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
+ +T YDL++ I H G S+G Y + ++ WYE D VT++ +
Sbjct: 608 L---------TTTYDLLSVICHHGTASSGHYIAYCRNELNQLWYEFDDQSVTEVSESCVQ 658
Query: 315 LTEAYIQIYE 324
EAY+ Y+
Sbjct: 659 NAEAYVLFYK 668
>gi|340721026|ref|XP_003398928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
terrestris]
Length = 541
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 124/328 (37%), Gaps = 53/328 (16%)
Query: 19 ARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSH----VSPHEMLQAVVLWSRKQFQFTE 74
R+ P F+ E +RK+ N +SP E L V+ +F+ +
Sbjct: 233 GRIVTPGRAKEFMSDALLAEELRKVLLGLNLGGSNGQAISP-ECLFLVIWKVVPRFRGYQ 291
Query: 75 QSDPIDFLSWFLNTLHRALN-----------GTKKKDSSIVYKTFLGSMKVKTRKIPPVE 123
Q D +FL++ L+ LH L G + K SIV F G++ +
Sbjct: 292 QQDAHEFLTYMLDRLHTELLQLLPRLGHEPLGLRGK-QSIVTAVFGGTL---------LS 341
Query: 124 LEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNN 183
+ + R +++T PF L+ D+P + + E + Y++ F
Sbjct: 342 VVHCMNCR-------TDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLT--YSLTRFFKV 392
Query: 184 ESEKEYKTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKN 236
E + + Y K+ KRF I LP L L++KRF + K T V+FP+K+
Sbjct: 393 EELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKS 452
Query: 237 VDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSN-GTYRVHLYHKGIG 295
+D V S +YDL A IVH G + G Y H G
Sbjct: 453 LDMSAFTVRGVSGTK--------LGASNSHLYDLAAVIVHHGSGAGTGHYTAFAVHD--G 502
Query: 296 KWYEIQDLHVTDILPQMITLTEAYIQIY 323
+W+ D V + + YI Y
Sbjct: 503 QWFHFNDSSVRPATTDAVAKCKPYILFY 530
>gi|326930344|ref|XP_003211307.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Meleagris
gallopavo]
Length = 906
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 560 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECVSQI--- 616
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 617 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 665
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 666 NAEAYVLFY 674
>gi|224073512|ref|XP_002198543.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Taeniopygia
guttata]
Length = 911
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 565 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECVSQI--- 621
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 622 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 670
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 671 NAEAYVLFY 679
>gi|405968000|gb|EKC33109.1| Ubiquitin carboxyl-terminal hydrolase 8 [Crassostrea gigas]
Length = 1129
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 124/312 (39%), Gaps = 51/312 (16%)
Query: 32 LVQRFGELMRKLWN-------PRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSW 84
+ F ++R LW+ PR+FK V H F T Q D DFL++
Sbjct: 835 IADDFSVIIRALWSGQYKCITPRDFKYVVGKH----------NPDFAGTTQQDSHDFLTF 884
Query: 85 FLNTLHRALNGTKKK------DSSIVYKTFLGSMKVKTRKIPP----VEL-EEKVRQRLL 133
++ LH LN KK+ D+ + + + K ++ VEL + +++ L+
Sbjct: 885 LMDGLHEGLNRVKKRPEIPEQDNDKMGDSQAAELAWKHHQLCNESIIVELFQGQLKSTLM 944
Query: 134 LTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYK 193
K + F++LT LP PP + + E + L+ + S K
Sbjct: 945 CLHCQKMSVNFQAFMFLT--LPIPPSSRCSLGECL----KLFLKEERLTGSSRWRCPRCK 998
Query: 194 --ENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKY 251
+ +K+ +I LP L++ + RF + EK + V+FP +N+D L
Sbjct: 999 VDRDAVKKIDIWRLPRILLIGLNRFVYKGQWREKINSFVDFPTRNLDLNPYLE------- 1051
Query: 252 ESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQ 311
K + Y L A H G G Y + + KW++ D HV+++
Sbjct: 1052 --------GPKSIKSSYRLYATSNHSGTLDGGHYTAYCRNPCTEKWFKYDDDHVSEMKES 1103
Query: 312 MITLTEAYIQIY 323
+ + AY+ Y
Sbjct: 1104 DVRSSLAYVLYY 1115
>gi|363740497|ref|XP_415470.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Gallus gallus]
Length = 892
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 546 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECVSQI--- 602
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 603 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 651
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 652 NAEAYVLFY 660
>gi|74000108|ref|XP_850913.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50
isoform 1 [Canis lupus familiaris]
Length = 373
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 127/336 (37%), Gaps = 44/336 (13%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
LC V+PL +YF+ ++R + + F +M +W VSP E+ +
Sbjct: 61 CLCSVSPLVEYFVSGKYITALQRDCRE----VATAFAYVMTDMW--LGDSECVSP-EVFR 113
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+ + F Q D +FL + LN LH AL +K S GS+ RK+
Sbjct: 114 SALGSLYPAFMKKTQQDAQEFLIYVLNELHEALKKYHRKRSHEK-----GSVLRCCRKVI 168
Query: 121 PVE-------LEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK---DEVLENIIP 170
E E ++ ++ + T F L+ LP P ++ + L+
Sbjct: 169 ASESSIITQLFEGQLNYSIMCLKCENCTYKNEVFTVLS--LPIPSEYECSLQDCLQCFFQ 226
Query: 171 QVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIV 230
Q L +NN+ + K+ R I+ P +I ++KRF K T +
Sbjct: 227 QDTL-----TWNNQIHCSFCETKQETAVRASISKAPKIIIFHLKRFDILGTMKRKLRTDI 281
Query: 231 NFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLY 290
++P+ N+D + P + + Y+L A + H G+ G Y
Sbjct: 282 HYPLTNLDLTPYICPVFR---------------KHPKYNLCAVVNHFGDLDGGHYTAFCK 326
Query: 291 HKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
+ WY D V++I + AY+ Y +
Sbjct: 327 NSVTQAWYSFDDTRVSEIPDTSVQTATAYLLFYSCQ 362
>gi|355728146|gb|AES09431.1| ubiquitin specific peptidase 8 [Mustela putorius furo]
Length = 487
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 140/340 (41%), Gaps = 44/340 (12%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 163 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQ--YRYISP 216
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIV 104
+ + + QF Q D + L + ++ LH LN + D
Sbjct: 217 KD-FKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKA 275
Query: 105 YKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEV 164
+ K I + + + + +K++ T F+YL+ LP K
Sbjct: 276 AEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLS--LPLASTSKC-T 332
Query: 165 LENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVE 224
L++ + + LT NN + + + LK+ EI LPP L++++KRF+ + + +
Sbjct: 333 LQDCLRLFSKEEKLTD-NNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQ 391
Query: 225 KNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNG 283
K T V+FP++N+D ++ P+ K Y+L + H G G
Sbjct: 392 KLQTSVDFPLENLDLSQYVIGPKNNLK----------------KYNLFSVSNHYGGLDGG 435
Query: 284 TYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
Y + + +W++ D V+DI + + AYI Y
Sbjct: 436 HYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 475
>gi|348570388|ref|XP_003470979.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cavia
porcellus]
Length = 901
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 553 NGVKYCKVLRLPEILCIHLKRFRHELTYSFKVSSHVSFPLEGLDLRPFLAKECTSQV--- 609
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 610 -----------TTYDLLSIICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 658
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 659 HAEAYVLFY 667
>gi|395856541|ref|XP_003800686.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Otolemur
garnettii]
Length = 936
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--THVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 490
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ N ++ +K T+V FPV N ++ ++ K +++ D
Sbjct: 784 KKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVSNPTSRNLSVKSIEKKESNSIGD 843
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
A ++++++ N K GKWY D V+ I
Sbjct: 844 QQLA--------VLSHLLDTAYAKN---------KLNGKWYYFDDSSVSLASEDQIVTKA 886
Query: 318 AYIQIYELRTTPS 330
AY+ Y+ R S
Sbjct: 887 AYVLFYQRRDDDS 899
>gi|321250129|ref|XP_003191699.1| ubiquitin-specific protease [Cryptococcus gattii WM276]
gi|317458166|gb|ADV19912.1| Ubiquitin-specific protease, putative [Cryptococcus gattii WM276]
Length = 1310
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 141/345 (40%), Gaps = 44/345 (12%)
Query: 8 LRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSR 67
L F R IN K P + L + + EL+R LW+ + +SP + + ++
Sbjct: 978 LDGTFSRSIN----KENPLGTKGELAKAWAELLRVLWSEKY--EFLSPMTFRKQITHFA- 1030
Query: 68 KQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP------ 121
QF ++Q D +FLS+ L+ LH LN K+K + +M PP
Sbjct: 1031 PQFLGSDQHDSQEFLSFVLDGLHEDLNRIKRKPPPVEMTPEREAM---LESAPPEVASER 1087
Query: 122 -------------VEL-EEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLEN 167
V+L + + R RL +K + T F+Y++ LP P V++
Sbjct: 1088 EWAIYRQRNDSLIVDLFQGQYRNRLECLTCHKTSTTYDAFMYMS--LPVPSGKTKVVIQE 1145
Query: 168 IIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRF-TKNTFFVEKN 226
+I + ++ K N KT + K I LPP L++ +KRF T++ F +K+
Sbjct: 1146 LIDEFVKAEVMEKENAWYCPRCKTNRRAS-KTLTIARLPPVLLIQLKRFTTRDGLFWDKS 1204
Query: 227 PTIVNFPVKNVDFGDILTPEVKAKYES-------TMYDLVKAKYESTMYDLVANIVHDGE 279
T V FP++ +D L + S +D +A+ YDL H G
Sbjct: 1205 ETPVIFPIRGLDLTRYLPGPAGSSVGSGRQVGPDGTFD-PRAQVGPFKYDLYGVSNHMGT 1263
Query: 280 PSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
S+G Y + K W +D V + + AYI Y+
Sbjct: 1264 LSSGHYTAFVKSK--EGWKYCEDSQVMPAQEKDVISRPAYILFYK 1306
>gi|145340661|ref|XP_001415439.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575662|gb|ABO93731.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 311
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 116/300 (38%), Gaps = 52/300 (17%)
Query: 55 PHEMLQAVVLWSR-KQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMK 113
PH++L++V W F EQ D +F+ + L+ L + L+ K S G +
Sbjct: 30 PHDLLRSV--WRLVPSFAGNEQQDAHEFMRFLLDRLRKELSSGKHAGSQT--NGLKGGLS 85
Query: 114 VKTRKIPPVELEE-------KVRQ--------RLLLTEEYKETETESPFLYLTCDLPPPP 158
+ K P + E+ K+ + + + + +E PF+ L+ +PP
Sbjct: 86 PTSPKTPQGKCEQDDGVTGDKIMEIFGGVAVTTVTCMKCERSSERREPFMDLSLPIPPVV 145
Query: 159 LFKDEVLENIIP--QVNLYTILTKF-NNESEKEYKTY-------KENFLKRFEITSLPPY 208
+ E P + L L F NE+ + Y ++ K I LPP
Sbjct: 146 GKNGSIEEGEGPNGEATLQQCLAAFVRNETLSGHGRYFCDGCGKVQSATKSTRIAKLPPV 205
Query: 209 LILYVKRFT-KNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTM 267
L L++KRFT K K V+FP+ ++D L P + E+ M
Sbjct: 206 LCLHLKRFTWKGHAMRTKLTHDVDFPLDDLD----LAPYCETNGEA-------------M 248
Query: 268 YDLVANIVHDG-EPSNGTYRV---HLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
YDLVA + H G +G Y +G W D V + + + + YI +Y
Sbjct: 249 YDLVAVVTHHGLNAGSGHYTACAREFTAEGNSDWQHFNDDDVNSLTAEEVRTGQGYIFLY 308
>gi|256074515|ref|XP_002573570.1| family C19 unassigned peptidase (C19 family) [Schistosoma mansoni]
gi|353229957|emb|CCD76128.1| family C19 unassigned peptidase (C19 family) [Schistosoma mansoni]
Length = 881
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 64/136 (47%), Gaps = 16/136 (11%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N LK+F + +LP L L++KRF+ N + K + VNFP+KN+D L + + K
Sbjct: 342 NGLKQFRLVALPEILTLHLKRFSSNHLYSSKLSSPVNFPLKNLDLSPFLHRDCRDKI--- 398
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDI-LPQMI 313
T YDL+ I H G G Y Y+ WYE D HV + QM
Sbjct: 399 -----------TTYDLIGVICHYGGCGGGHYTTCAYNPPTEHWYEFNDEHVRKLDAEQME 447
Query: 314 TL-TEAYIQIYELRTT 328
+L + AYI Y R T
Sbjct: 448 SLKSSAYILFYRKRDT 463
>gi|344271628|ref|XP_003407639.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Loxodonta
africana]
Length = 911
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K V+FP++ +D L E ++
Sbjct: 565 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINNHVSFPLEGLDLRPFLAKECMSQI--- 621
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 622 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 670
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 671 NAEAYVLFY 679
>gi|348668895|gb|EGZ08718.1| hypothetical protein PHYSODRAFT_564649 [Phytophthora sojae]
Length = 583
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 190 KTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKA 249
KT++ + K+ + LP L+L++KRF+ +TF +K T ++FP +++D + + +
Sbjct: 454 KTHR-SAAKKISVYRLPNVLVLHLKRFSFSTFSRDKVSTSISFPAQSLDLAEYCSSDA-- 510
Query: 250 KYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDIL 309
+V ST+YDL + H G + G Y + + +W++ D VT I
Sbjct: 511 --------VVDG---STLYDLTGIVHHMGSLNGGHYTAECLNADMQEWFDFNDSSVTAIK 559
Query: 310 PQMITLTEAYIQIYELR 326
+ + AY+ Y+ R
Sbjct: 560 KPELYSSSAYMLFYQRR 576
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 12 FLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQ 71
F REIN + + L FG+L++ LW F + P E L+ V+ +F
Sbjct: 237 FAREINESSPTKG------ALANAFGDLIKALWTGDKFTA-TRPVE-LKRVIGKVASRFT 288
Query: 72 FTEQSDPIDFLSWFLNTLHRALNGTKKK 99
+Q D +FL + L+ LH LN KKK
Sbjct: 289 GYDQQDAQEFLRFLLDGLHEDLNRVKKK 316
>gi|74186201|dbj|BAE42896.1| unnamed protein product [Mus musculus]
Length = 296
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ + EK +
Sbjct: 119 IKLFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLPEVLIIHLKRFSFSKISREKLDNL 178
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K K ES+ DL K YDL+A H G +G Y
Sbjct: 179 VQFPIRDLDFSEFV---IKPKNESSP-DLYK-------YDLIAVSNHYGGMRDGHYTTFA 227
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 228 CNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 262
>gi|395822175|ref|XP_003784399.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Otolemur garnettii]
Length = 375
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 130/342 (38%), Gaps = 44/342 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
LC ++PL +YFL +++ + + F LM +W VSP E+ +
Sbjct: 63 CLCSISPLVEYFLSGKYMTALQKDCSE----VATAFAYLMTDMW--LGDSDCVSP-EIFR 115
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+ + F Q D +FL + LN LH AL ++ S Y+ S++ RK+
Sbjct: 116 SALGNLYPAFMKKTQQDAQEFLIYVLNELHEALKKYHRRRS---YEK--RSIQRCCRKVI 170
Query: 121 PVE-------LEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK---DEVLENIIP 170
E E ++ ++ + T F L+ LP P ++ + L+
Sbjct: 171 ANETSIITRLFEGQLNYSIVCLKCENCTYRNEVFTVLS--LPIPCEYECSLQDCLQCFFQ 228
Query: 171 QVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIV 230
Q L +NN+ + + R I+ P ++ ++KRF K T +
Sbjct: 229 QDTL-----TWNNQIRCAFCETNQETAVRASISKAPKIIVFHLKRFDIQGMMKRKLRTNI 283
Query: 231 NFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLY 290
++P+ N+D + P + + Y+L A + H G+ G Y
Sbjct: 284 HYPLTNLDLTSYICPIFR---------------KHPKYNLCAVVNHFGDLDGGHYTAFCK 328
Query: 291 HKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
+ WY D V++I + AY+ Y + PT
Sbjct: 329 NSVTQAWYSFDDTRVSEIPDTSVQTATAYLLFYSCQPFSIPT 370
>gi|321460141|gb|EFX71186.1| hypothetical protein DAPPUDRAFT_309166 [Daphnia pulex]
Length = 372
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 14/134 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K I LP L +++KRF F K + ++FP++ +D L+ + +K
Sbjct: 45 NGIKFSMIEVLPEVLTIHLKRFRHEPLFSSKISSHISFPIRGLDMKPWLSRDCSSKI--- 101
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDLVA IVH G G Y + ++ +W E D + + +
Sbjct: 102 -----------TTYDLVAVIVHHGTAGGGHYTCYALNEPSSQWMEFDDSSARPVSVETVA 150
Query: 315 LTEAYIQIYELRTT 328
+AY+ Y+ R T
Sbjct: 151 NCQAYVLFYQKRRT 164
>gi|262360004|gb|ACY56907.1| RH33842p [Drosophila melanogaster]
Length = 896
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 130/316 (41%), Gaps = 63/316 (19%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLS----WF-- 85
+++ L+++LWN + +K S L+ VV +K F+ +Q D +FL+ W
Sbjct: 610 VIEEVAALIKELWNGQ-YKCVASRD--LRYVVGQYQKIFRGVDQQDSHEFLTILMDWLRS 666
Query: 86 -LNTLH-------------RALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQR 131
L TLH L TK K+S I++ F G MK + +
Sbjct: 667 DLQTLHVPRQREMISASEKAWLEFTKAKESMILH-LFYGQMKSTVKCVAC---------- 715
Query: 132 LLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKT 191
+KE+ T F L+ +LPP + + + +++Y + + + KT
Sbjct: 716 ------HKESATYESFSNLSLELPP-----NSNVCQLNQCMDMYFSGERIHGWNCPSCKT 764
Query: 192 YKENFLKRFEITSLPPYLILYVKRF---TKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEV 247
K + +K+ +I+ LPP L++++KRF N+ K + FP++N+D I E
Sbjct: 765 -KRDAIKKLDISKLPPVLVVHLKRFYADPSNSGSYMKKQNYLRFPLENLDMNPYIARAES 823
Query: 248 KAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTD 307
+A T Y L A H G G Y GKW++ D V+
Sbjct: 824 RAVTPKT-------------YQLYAVSNHYGTMEGGHYTAFCKSANYGKWFKFDDQVVSA 870
Query: 308 ILPQMITLTEAYIQIY 323
+ + + AYI Y
Sbjct: 871 LDSSNVVSSAAYILFY 886
>gi|332230223|ref|XP_003264287.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 1
[Nomascus leucogenys]
gi|332230225|ref|XP_003264288.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 2
[Nomascus leucogenys]
Length = 914
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 568 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQI--- 624
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 625 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 673
Query: 315 LTEAYIQIY 323
E Y+ Y
Sbjct: 674 NAEGYVLFY 682
>gi|55728896|emb|CAH91186.1| hypothetical protein [Pongo abelii]
Length = 920
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 742 IELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTL 801
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
V FP++++DF + ++ P+ + E YDL+ V+N H G +G Y
Sbjct: 802 VEFPIRDLDFSEFVIQPQNDSNPELYKYDLIA----------VSN--HYGGMRDGHYTTF 849
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE----LRTTPSPTAMS 335
+K G+W+ D V+ + I AY+ Y+ R SPT S
Sbjct: 850 ACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQDVARRLLSPTGSS 900
>gi|444525919|gb|ELV14207.1| Ubiquitin carboxyl-terminal hydrolase 11 [Tupaia chinensis]
Length = 937
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 759 IELFTTVETLEKENPWYCPSCKKHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTL 818
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K + ES E YDL+A H G +G Y
Sbjct: 819 VEFPIRDLDFSEFV---IKPQNESAP--------ELYKYDLIAVSNHYGGMRDGHYTTFA 867
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 868 CNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 902
>gi|55727816|emb|CAH90661.1| hypothetical protein [Pongo abelii]
Length = 931
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 753 IELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTL 812
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
V FP++++DF + ++ P+ + E YDL+ V+N H G +G Y
Sbjct: 813 VEFPIRDLDFSEFVIQPQNDSNPELYKYDLIA----------VSN--HYGGMRDGHYTTF 860
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE----LRTTPSPTAMS 335
+K G+W+ D V+ + I AY+ Y+ R SPT S
Sbjct: 861 ACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQDVARRLLSPTGSS 911
>gi|348524280|ref|XP_003449651.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like
[Oreochromis niloticus]
Length = 921
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 575 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDMRPFLAKESPSQV--- 631
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 632 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 680
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 681 NAEAYVLFY 689
>gi|24660425|gb|AAH39593.1| Ubiquitin specific peptidase 20 [Homo sapiens]
gi|119608320|gb|EAW87914.1| ubiquitin specific peptidase 20, isoform CRA_b [Homo sapiens]
Length = 913
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 567 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQI--- 623
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 624 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 672
Query: 315 LTEAYIQIY 323
E Y+ Y
Sbjct: 673 NAEGYVLFY 681
>gi|397503609|ref|XP_003822413.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 1 [Pan
paniscus]
gi|397503611|ref|XP_003822414.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 2 [Pan
paniscus]
Length = 914
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 568 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQI--- 624
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 625 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 673
Query: 315 LTEAYIQIY 323
E Y+ Y
Sbjct: 674 NAEGYVLFY 682
>gi|40789018|dbj|BAA76847.2| KIAA1003 protein [Homo sapiens]
Length = 917
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 571 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQI--- 627
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 628 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 676
Query: 315 LTEAYIQIY 323
E Y+ Y
Sbjct: 677 NAEGYVLFY 685
>gi|410227942|gb|JAA11190.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410227944|gb|JAA11191.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410263220|gb|JAA19576.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410263222|gb|JAA19577.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410303424|gb|JAA30312.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410303426|gb|JAA30313.1| ubiquitin specific peptidase 20 [Pan troglodytes]
Length = 914
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 568 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQI--- 624
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 625 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 673
Query: 315 LTEAYIQIY 323
E Y+ Y
Sbjct: 674 NAEGYVLFY 682
>gi|114627163|ref|XP_520313.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 2 [Pan
troglodytes]
gi|332833113|ref|XP_003339229.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Pan
troglodytes]
gi|410336889|gb|JAA37391.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410336891|gb|JAA37392.1| ubiquitin specific peptidase 20 [Pan troglodytes]
Length = 914
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 568 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQI--- 624
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 625 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 673
Query: 315 LTEAYIQIY 323
E Y+ Y
Sbjct: 674 NAEGYVLFY 682
>gi|183396780|ref|NP_001103773.2| ubiquitin carboxyl-terminal hydrolase 20 [Homo sapiens]
gi|183397134|ref|NP_006667.3| ubiquitin carboxyl-terminal hydrolase 20 [Homo sapiens]
gi|183397136|ref|NP_001008563.2| ubiquitin carboxyl-terminal hydrolase 20 [Homo sapiens]
gi|116242837|sp|Q9Y2K6.2|UBP20_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20; AltName:
Full=VHL-interacting deubiquitinating enzyme 2;
Short=hVDU2
Length = 914
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 568 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQI--- 624
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 625 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 673
Query: 315 LTEAYIQIY 323
E Y+ Y
Sbjct: 674 NAEGYVLFY 682
>gi|119608317|gb|EAW87911.1| ubiquitin specific peptidase 20, isoform CRA_a [Homo sapiens]
gi|119608318|gb|EAW87912.1| ubiquitin specific peptidase 20, isoform CRA_a [Homo sapiens]
gi|119608319|gb|EAW87913.1| ubiquitin specific peptidase 20, isoform CRA_a [Homo sapiens]
Length = 916
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 570 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQI--- 626
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 627 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 675
Query: 315 LTEAYIQIY 323
E Y+ Y
Sbjct: 676 NAEGYVLFY 684
>gi|197101307|ref|NP_001126647.1| ubiquitin carboxyl-terminal hydrolase 20 [Pongo abelii]
gi|75054783|sp|Q5R5Z6.1|UBP20_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|55732232|emb|CAH92820.1| hypothetical protein [Pongo abelii]
Length = 913
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 567 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQI--- 623
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 624 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 672
Query: 315 LTEAYIQIY 323
E Y+ Y
Sbjct: 673 NAEGYVLFY 681
>gi|197099624|ref|NP_001125307.1| ubiquitin carboxyl-terminal hydrolase 4 [Pongo abelii]
gi|75055118|sp|Q5RCD3.1|UBP4_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|55727639|emb|CAH90574.1| hypothetical protein [Pongo abelii]
Length = 963
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 319 CLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--AHVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKK------KDSS-----IVYKTF 108
+ V QF +Q D + L++ L+ LH LN KK KD++ +V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDVVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD V+E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRVME 490
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+ ++ SLP L++++KRF+ N ++ +K T+V FP++ ++ + + Y
Sbjct: 810 KKSDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPY------ 863
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ I
Sbjct: 864 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKA 914
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 915 AYVLFYQRR 923
>gi|393214464|gb|EJC99956.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
Length = 1206
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 70/335 (20%), Positives = 137/335 (40%), Gaps = 48/335 (14%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
L F ++ LW+ + ++P ++V ++ +QF +EQ D +FL++ L+ LH
Sbjct: 874 LTAAFASILHDLWHQES--PTITPLAFRKSVCMYG-QQFAGSEQHDSQEFLNFLLDGLHE 930
Query: 92 ALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVE----------------LEEKVRQRLLLT 135
LN K+ + +++ ++I + + + R R+
Sbjct: 931 DLNRILNKEPVLRTPEREAELELLPQQIASQQEWNLYRMRDDSIVVDFFQGQFRNRMECL 990
Query: 136 EEYKETETESPFLYLTCDLP--PPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYK 193
K + T + F+YLT +P L+ + ++ K + KT +
Sbjct: 991 TCRKTSTTYNSFMYLTLPIPMGGRGFGGKATLQQCLDAFVQEEVMEKADAWQCPNCKTLR 1050
Query: 194 ENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDI----LTPEV-K 248
+ K+ I+ LPP L++++KRFT F +K T V+FP++ +D + L P V +
Sbjct: 1051 KA-TKKLSISRLPPVLLIHLKRFTTKGHFTDKLETFVDFPLRGLDLTNYMPAPLPPNVDR 1109
Query: 249 AKYESTMYDLV-------------------KAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
+K S+ ++ +++ YDL A H G S+G Y +
Sbjct: 1110 SKLYSSATGMLNGSAQVAGTTQTPISLDDPRSQVPPYKYDLYAVTNHFGTLSSGHYTAFV 1169
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+ G W D ++ + + AY+ Y+
Sbjct: 1170 NSR--GNWLYCDDSRISTADAKEVVGKPAYVLYYK 1202
>gi|145524463|ref|XP_001448059.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415592|emb|CAK80662.1| unnamed protein product [Paramecium tetraurelia]
Length = 975
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 60/133 (45%), Gaps = 9/133 (6%)
Query: 201 EITSLPPYLILYVKRF-TKNTFFVEKNPTIVNFPVKNVDFGDIL----TP-EVKAKYEST 254
+I P LI + RF N F +K +VNFP+ N+D D + TP E + ES
Sbjct: 835 QIYKAPQLLIFKLNRFKANNKIFKQKIEDLVNFPINNLDMTDYVINSNTPNEFLKENESN 894
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
++ K K +YDL A H G G Y + +K WY D V I+ +
Sbjct: 895 NGEINKKK---VIYDLYAISNHFGGQGEGHYTTYAKNKFTNNWYNFNDSMVNQIMESFVV 951
Query: 315 LTEAYIQIYELRT 327
AY+ Y+LRT
Sbjct: 952 SESAYVLCYQLRT 964
>gi|23262727|gb|AAL79676.1| pVHL-interacting deubiquitinating enzyme 2 [Homo sapiens]
gi|168278785|dbj|BAG11272.1| ubiquitin carboxyl-terminal hydrolase 20 [synthetic construct]
Length = 913
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 567 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQI--- 623
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 624 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 672
Query: 315 LTEAYIQIY 323
E Y+ Y
Sbjct: 673 NAEGYVLFY 681
>gi|403297385|ref|XP_003939546.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Saimiri
boliviensis boliviensis]
Length = 923
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 745 IELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTL 804
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K + ES E YDL+A H G +G Y
Sbjct: 805 VEFPIRDLDFSEFV---IKPQNESNP--------ELYKYDLIAVSNHYGGMRDGHYTTFA 853
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 854 CNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 888
>gi|320166287|gb|EFW43186.1| ubiquitin specific peptidase 11 [Capsaspora owczarzaki ATCC 30864]
Length = 1643
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 10/133 (7%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F + LP +++++KRF + + +K +++P++ ++ + E + E
Sbjct: 1215 KQFHLWKLPDVVVVHLKRFQYSKSWRDKIEANIHYPMRGLNLAPFVAAEAQLHNEP---- 1270
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
++ +YDLV + H G S G Y H +WY D H + P + +E
Sbjct: 1271 ------DTMLYDLVGVVNHFGGMSGGHYTAFALHAPTNQWYNYNDSHCSKAQPHEVVNSE 1324
Query: 318 AYIQIYELRTTPS 330
AY+ Y+ R S
Sbjct: 1325 AYVLFYQRRHCAS 1337
Score = 38.1 bits (87), Expect = 6.1, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 2 LCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L ++ PL YF+ + R P + +G L+R+LW+ + F V+P+ +
Sbjct: 454 LSNIAPLTSYFVSNAFVDHINRDNPLGLKGKMADEYGALIRELWSGK-FDC-VAPNSFKK 511
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK 99
A+ ++ QF Q D +FL++ L+ LH LN KK
Sbjct: 512 ALGSFA-TQFAGYSQQDSQEFLAFLLDGLHEDLNRVLKK 549
>gi|281312477|sp|A5PN09.1|UBP20_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
Length = 911
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 568 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLKPFLAKESPSQI--- 624
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 625 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 673
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 674 NAEAYVLFY 682
>gi|158966727|ref|NP_957281.2| ubiquitin carboxyl-terminal hydrolase 20 [Danio rerio]
gi|148725228|emb|CAN88088.1| ubiquitin specific protease 20 [Danio rerio]
gi|148725501|emb|CAN88765.1| ubiquitin specific protease 20 [Danio rerio]
Length = 913
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 568 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLKPFLAKESPSQI--- 624
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 625 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 673
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 674 NAEAYVLFY 682
>gi|395854375|ref|XP_003799671.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Otolemur
garnettii]
Length = 915
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 737 IELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTL 796
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
V FP++++DF + +L P+ ++ E YDL+ V+N H G +G Y
Sbjct: 797 VQFPIRDLDFSEFVLKPQNESAPELYKYDLIA----------VSN--HYGGMRDGHYTTF 844
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 845 ACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 880
>gi|383854138|ref|XP_003702579.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Megachile
rotundata]
Length = 542
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 126/328 (38%), Gaps = 53/328 (16%)
Query: 19 ARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSH----VSPHEMLQAVVLWSRKQFQFTE 74
R+ P F+ E +RK+ N +SP E L V+ +F+ +
Sbjct: 234 GRIVTPGRAKEFMNDALLAEELRKVLLGLNLGGSNGQAISP-ECLFLVIWKVVPRFRGYQ 292
Query: 75 QSDPIDFLSWFLNTLHRALN-----------GTKKKDSSIVYKTFLGSMKVKTRKIPPVE 123
Q D +FL++ L+ LH L G + K SIV F G++ +
Sbjct: 293 QQDAHEFLTYMLDRLHTELLQLLPRLGHEPLGLRGK-QSIVTAVFGGTL---------LS 342
Query: 124 LEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNN 183
+ + R +++T PF L+ D+P + + E + Y++ F
Sbjct: 343 VVHCMNCR-------TDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLT--YSLSRFFKV 393
Query: 184 ESEKEYKTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKN 236
E + + Y K+ KRF I LP L L++KRF + K T V+FP+K+
Sbjct: 394 EELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKS 453
Query: 237 VDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSN-GTYRVHLYHKGIG 295
+D + A M S +YDL A IVH G + G Y H G
Sbjct: 454 LD--------MSAFTVRGMTGTKLGASNSHLYDLAAVIVHHGSGAGTGHYTAFAVHD--G 503
Query: 296 KWYEIQDLHVTDILPQMITLTEAYIQIY 323
+W+ D V + + YI Y
Sbjct: 504 QWFHFNDSSVRPATTDAVAKCKPYILFY 531
>gi|403298497|ref|XP_003940054.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Saimiri
boliviensis boliviensis]
Length = 915
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 568 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQI--- 624
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 625 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 673
Query: 315 LTEAYIQIY 323
E Y+ Y
Sbjct: 674 NAEGYVLFY 682
>gi|170046356|ref|XP_001850734.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167869155|gb|EDS32538.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 638
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 83/202 (41%), Gaps = 31/202 (15%)
Query: 140 ETETESPFLYLTCDLPPPPLFKDEVLENI------IPQVNLYTILTKFNNESE-KEYKTY 192
E++ PFL L+ D+P K+ ++ P ++ L+ F E E + Y
Sbjct: 434 ESKKHDPFLDLSLDIPEKFYTKESAVDGGGDKDKDAPVCHISDCLSSFTEVEELAETELY 493
Query: 193 -------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDIL-- 243
K+ KRF I LP L L++KRF N F+ K ++FP+ +D +
Sbjct: 494 YCNSCKCKQKSTKRFWIRRLPNVLCLHIKRFRWNNFYRTKIDLRISFPINALDMSQFVLN 553
Query: 244 -TPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSN-GTYRVHLYHKGIGKWYEIQ 301
PE + ++ +YDL A IVH G S+ G Y + G+ W
Sbjct: 554 NGPETR-----------RSNSSCNVYDLAAVIVHHGNGSSCGHYTSFAINNGV--WMHFN 600
Query: 302 DLHVTDILPQMITLTEAYIQIY 323
D V ++ + + YI Y
Sbjct: 601 DHTVKEVSSAAVADCKPYILFY 622
>gi|395844586|ref|XP_003795039.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Otolemur
garnettii]
Length = 924
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 22/162 (13%)
Query: 170 PQVNLYTILTKF--------NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTF 221
P V L LT F +N E N +K ++ LP L +++KRF
Sbjct: 545 PVVTLEDCLTAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCVHLKRFRHEVT 604
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
+ K + V+FP++ +D L E ++ T YDL++ I H G
Sbjct: 605 YSFKISSHVSFPLEGLDLRPFLAKECTSQI--------------TTYDLLSVICHHGTAG 650
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
+G Y + + G+WYE D +VT++ ++ E Y+ Y
Sbjct: 651 SGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLFY 692
>gi|167525557|ref|XP_001747113.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774408|gb|EDQ88037.1| predicted protein [Monosiga brevicollis MX1]
Length = 344
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 121/318 (38%), Gaps = 45/318 (14%)
Query: 1 ALCHVTPLRDYFLREINYARV----KRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPH 56
L H+ PL + F E + + + G S L+ Q +G L+R LW P V P
Sbjct: 26 CLSHIRPLGEVFGNEAKLSSLLNTHSKALG-SHGLIAQAYGRLLRDLWQPARMTP-VRPA 83
Query: 57 EMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALN--GTKKKDSSIVYKTFLGSMKV 114
+ +A+ +R+ F +Q D +FL + L+ LH +N G K + + F
Sbjct: 84 DFKRAISRRNRR-FMGYDQQDAPEFLEFLLDELHEDVNRVGEKPYAADRAWANFH----- 137
Query: 115 KTRKIPPVEL-EEKVRQRLLLTEEYKETETESPFLYLTCDLPPP--PLFKDEVLENIIPQ 171
+ P V+L + ++R R+ K + PF L LP P P E +
Sbjct: 138 RRDDSPVVDLFQGQLRSRVCCPTCSKVSVIFDPFRSLALPLPRPRTPCTGQEA-SAAVGL 196
Query: 172 VNLYTILTK---FNNESEKEYKTYKEN--FLKRFEITSLPPYLILYVKRFTKNT--FFVE 224
Y +L K +++++ KE+ +K + LPP L+++ KRF V
Sbjct: 197 HTAYELLAKPEVLSHDNQWYCNRCKEHRQAIKELAVWRLPPILVVHFKRFAHGASRLRVT 256
Query: 225 KNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGT 284
T + +P + L A + Y L + H G G
Sbjct: 257 SATTQITYPER--------------------LHLDDASGQGRDYRLRGVVCHRGTLYYGH 296
Query: 285 YRVHLYHKGIGKWYEIQD 302
Y + H G WY D
Sbjct: 297 YVAYARHAVTGDWYYYDD 314
>gi|340377167|ref|XP_003387101.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like
[Amphimedon queenslandica]
Length = 636
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 134/345 (38%), Gaps = 42/345 (12%)
Query: 1 ALCHVTPLRDYFLR---EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHE 57
L H + ++FL + A R S L V + E + ++W P++ K+ V+P+
Sbjct: 309 CLSHTRQMTEFFLSGDAKAEAAEATRTKARRSSL-VNAYTEFLEQMWKPKDDKA-VTPNH 366
Query: 58 MLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-------------DSSIV 104
+ A+ + +EQ D +FL + L LH N KK+ S +
Sbjct: 367 LRSAMSSLI-PMVRTSEQQDAQEFLQFLLCCLHEETNKPKKRLESSESSSSTNLTPSELA 425
Query: 105 YKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEV 164
++ S+ + + + + VR L T + + F L+ LP
Sbjct: 426 RSSWKRSLSYDNSYLSDLFMGQ-VRSTLTCTTCRNTSLSFESFWSLSLPLPSKSKSHSSS 484
Query: 165 LENIIPQV-NLYTILTKFNNESEKEYKTYKEN--FLKRFEITSLPPYLILYVKRFTKNTF 221
L I LY+ + +++++ K + K+ +I P LIL++KRFT
Sbjct: 485 LFITISDCFQLYSAEERLDSDNQPVCTKCKSSQPSTKKLDIQIFPKILILHLKRFTVRNR 544
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
+ K P+ V P + E+ ES +S Y+L I H G S
Sbjct: 545 YCTKLPSNVKVPTT------VTVEEIAVDKESV---------KSFKYELYGIINHSGTIS 589
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEA--YIQIYE 324
G Y+ H GKWY D VT MIT A Y+ YE
Sbjct: 590 FGHYKAECKHS--GKWYTFNDRVVTSSSEAMITNPSASPYVLFYE 632
>gi|301104609|ref|XP_002901389.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
gi|262100864|gb|EEY58916.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
Length = 563
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 187 KEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPE 246
++ KT++ + K+ + LP L+L++KRF+ +TF +K T ++FP +++D + +
Sbjct: 431 QKCKTHR-SVAKKISVYRLPNVLVLHLKRFSYSTFSRDKVSTSISFPAQSLDIAEYCASD 489
Query: 247 VKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVT 306
+V ST+YDL + H G + G Y + +W++ D VT
Sbjct: 490 A----------VVDG---STLYDLTGIVHHMGSLNGGHYTAECLNADTQEWFDFNDGSVT 536
Query: 307 DILPQMITLTEAYIQIYELR 326
I + + AY+ Y+ R
Sbjct: 537 AIKKPELYSSSAYMLFYQRR 556
>gi|410924033|ref|XP_003975486.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Takifugu
rubripes]
Length = 909
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ +LP L +++KRF F K T V+FP++ +D L K + T
Sbjct: 565 NGVKFCKMQNLPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFL---AKDSFSQT 621
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 622 -----------TNYDLLSVICHHGTASSGHYIAYCRNDENNLWYEFDDHRVTEVSESCVQ 670
Query: 315 LTEAYIQIYE 324
EAY+ Y+
Sbjct: 671 NAEAYVLFYK 680
>gi|291393673|ref|XP_002713400.1| PREDICTED: ubiquitin specific protease 4 [Oryctolagus cuniculus]
Length = 859
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP L++++KRF+ + ++ +K T V FPV+ ++ + + Y
Sbjct: 705 KKFDLWSLPKILVVHLKRFSYSRYWRDKLDTAVEFPVRALNMSEFVCDPSARPY------ 758
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K GKWY D +V+ + I
Sbjct: 759 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEEQIVTKA 809
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 810 AYVLFYQRR 818
>gi|363737748|ref|XP_413830.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Gallus
gallus]
Length = 1125
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 145/345 (42%), Gaps = 54/345 (15%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFL-----LVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L +YF + + + R S+FL + + FG +M+ LW + +K ++SP
Sbjct: 801 CLCNAPHLAEYFNKNLYQDDINR----SNFLGHKGEVAEEFGVIMKALWTGQ-YK-YISP 854
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYK----TFLGS 111
+ + + QF Q D + L + ++ LH LN K D+ YK L
Sbjct: 855 KD-FKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLN---KADNRKRYKEENNDHLDD 910
Query: 112 MKVK----------TRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK 161
+K I + + + + +K++ T F+YL+ LP K
Sbjct: 911 LKAAELAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLS--LPLASTSK 968
Query: 162 DEVLENIIPQVNLYTILTKF--NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKN 219
+ E + L++ K NN + + + LK+ EI LPP L++++KRF+ +
Sbjct: 969 CTLQECL----RLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYD 1024
Query: 220 TFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG 278
+ +K T V+FP++ +D ++ P+ K Y+L + H G
Sbjct: 1025 GRWKQKLQTSVDFPLETLDLSQYVIGPKNNLK----------------RYNLFSVSNHYG 1068
Query: 279 EPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + +W++ D V++I + + AYI Y
Sbjct: 1069 GLDGGHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFY 1113
>gi|328872047|gb|EGG20417.1| peptidase C19 family protein [Dictyostelium fasciculatum]
Length = 1393
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 17/135 (12%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMY 256
K+F+I S PP L++++KRF+ + EK T+V FP+K++D +L+P
Sbjct: 1134 KKFDIWSAPPILVIHLKRFSYKKAWREKLDTLVRFPIKDLDLSSHVLSPSDSP------- 1186
Query: 257 DLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLT 316
+YDL A H G G Y + ++ +W + D H ++ +
Sbjct: 1187 ---------PVYDLFAVSNHYGSMGGGHYTAYALNELENQWVKFDDSHTQNVDASNVITD 1237
Query: 317 EAYIQIYELRTTPSP 331
AY+ Y + T SP
Sbjct: 1238 AAYVLFYRRKDTYSP 1252
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 70/175 (40%), Gaps = 31/175 (17%)
Query: 1 ALCHVTPLRDYFLRE--INYARVKRPPGDSSFLLVQRFGELMRKLW-------NPRNFKS 51
L + PL Y L E + V P G + L + + L++++W PRNFK+
Sbjct: 672 CLSNAIPLTRYLLNEKHLEDLNVDNPLG-CNGDLAKEYANLIKQIWKGDMTSVGPRNFKT 730
Query: 52 HVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------D 100
+ QF +Q D + L++ L+ LH +N KKK
Sbjct: 731 AIERFA----------PQFMGYQQHDSQELLAFLLDGLHEDMNQVKKKPFFEGKDYDGRA 780
Query: 101 SSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLP 155
I+ + + + I + +++ +L+ E + T PF+YL+ LP
Sbjct: 781 DEIIANEQWEMHRARNKSIIVDWFQAQLKSKLICPECENISITFDPFMYLSLPLP 835
>gi|164655843|ref|XP_001729050.1| hypothetical protein MGL_3838 [Malassezia globosa CBS 7966]
gi|159102939|gb|EDP41836.1| hypothetical protein MGL_3838 [Malassezia globosa CBS 7966]
Length = 808
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 122/336 (36%), Gaps = 72/336 (21%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
L F L+R LW+ ++ V+P +A+ ++ F+ EQ D +FL + L+ LH
Sbjct: 502 LANAFASLLRALWSEQSVS--VAPTAFREAIGQFA-PAFRGNEQQDSQEFLMFLLDGLHE 558
Query: 92 ALNGT---------------------------------KKKDSSIVYKTFLGSMKVKTRK 118
LN ++++ SIV TF G
Sbjct: 559 DLNLVVQRPPALELGEAQQAELSRLPQQLASVAEWSLYRRRNDSIVVDTFQG-------- 610
Query: 119 IPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTIL 178
++R +L + T + F+ L+ +P + + +LY +
Sbjct: 611 --------QLRNQLTCLTCGHTSITYNAFMSLSLPVP---------TGRGVSRASLYQCM 653
Query: 179 TKFNNESEKEYKTY--------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIV 230
F E E KR + LPP LI+++KRFT K T V
Sbjct: 654 DAFVREEVLEKGNAWHCPKCKKPRRSTKRLSLARLPPVLIIHLKRFTFRGPASNKIETPV 713
Query: 231 NFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLY 290
F +D + + P + + +++ +YDL A H G +G Y +
Sbjct: 714 VFATDALDLSNFMPPPLPPGTSVRGIPISESQRPPYLYDLFAVTHHFGTLHSGHYTASVR 773
Query: 291 HKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
+GI WY D +T Q+ T + Y+ + R
Sbjct: 774 TQGI--WYYCDDSRITPSDAQIQT-SSPYVLFFSRR 806
>gi|109110028|ref|XP_001107144.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Macaca
mulatta]
Length = 914
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K + LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 568 NGVKYCRVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQI--- 624
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 625 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 673
Query: 315 LTEAYIQIY 323
E Y+ Y
Sbjct: 674 NAEGYVLFY 682
>gi|383410867|gb|AFH28647.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
gi|383410869|gb|AFH28648.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
Length = 914
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K + LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 568 NGVKYCRVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQI--- 624
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 625 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 673
Query: 315 LTEAYIQIY 323
E Y+ Y
Sbjct: 674 NAEGYVLFY 682
>gi|380809004|gb|AFE76377.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
gi|380809006|gb|AFE76378.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
gi|384942948|gb|AFI35079.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
gi|384942950|gb|AFI35080.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
Length = 914
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K + LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 568 NGVKYCRVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQI--- 624
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 625 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 673
Query: 315 LTEAYIQIY 323
E Y+ Y
Sbjct: 674 NAEGYVLFY 682
>gi|356550050|ref|XP_003543403.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Glycine
max]
Length = 872
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+ ++ LP L++++KRF + + K T V+FPV N+D +T Y T+Y
Sbjct: 755 KKLDLWRLPEILVIHLKRFQYSRYLKNKLETYVDFPVDNLDLSAYITHGNGESYNYTLY- 813
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
V+N H G G Y + H+G +WY+ D HV I+ + I +
Sbjct: 814 ------------AVSN--HYGSMGGGHYTAFV-HRGGDQWYDFDDSHVYPIIKEKIKSSA 858
Query: 318 AYIQIY 323
AY+ Y
Sbjct: 859 AYVLFY 864
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 85/206 (41%), Gaps = 28/206 (13%)
Query: 1 ALCHVTPLRDYFL----REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPH 56
L H L DYFL REIN+ P G + + + FG+L+RKLW P S V+P
Sbjct: 295 CLAHTPKLVDYFLEDYIREINH---DNPLGMNGEIALA-FGDLLRKLWAPG--ASPVAPR 348
Query: 57 EMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALN------------GTKKKDSSIV 104
+ ++ QF Q D + L++ L+ LH LN G + D +
Sbjct: 349 TFKSKLARFA-PQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKPYIEVKDGDDRPDEEVA 407
Query: 105 YKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEV 164
+ + + I V + + + L+ K + T PF+YL+ LP + +
Sbjct: 408 DEYWHNHLARNDSVIVDV-CQGQYKSTLVCPVCRKVSVTFDPFMYLSLPLPSTTMRTMTI 466
Query: 165 L----ENIIPQVNLYTILTKFNNESE 186
+PQ++ YTI N E
Sbjct: 467 TVSGNGGEMPQLSPYTITVPKNGRFE 492
>gi|355752999|gb|EHH57045.1| hypothetical protein EGM_06605 [Macaca fascicularis]
Length = 914
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K + LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 568 NGVKYCRVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQI--- 624
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 625 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 673
Query: 315 LTEAYIQIY 323
E Y+ Y
Sbjct: 674 NAEGYVLFY 682
>gi|350407452|ref|XP_003488090.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Bombus
impatiens]
Length = 994
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 131/298 (43%), Gaps = 25/298 (8%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
+V+ ++++ LW + +KS +SPH++ AV + + QF+ EQ D +FL++ L+ +H
Sbjct: 708 VVEEVAQVIKALWRGQ-YKS-ISPHDLKIAVGQY-KLQFESYEQQDSHEFLTFLLDWMHN 764
Query: 92 ALNGTKKK--DSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLY 149
L K + ++ K + +M + I + + +R + + + + T F
Sbjct: 765 DLKKNCKVPLEMTVAEKAWDKAMDSQKSIISDLFFGQ-LRSTITCSFCKQSSTTYEMFNS 823
Query: 150 LTCDLPPP--PLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPP 207
LT LP D +L+ + Q + K E K+F+ L P
Sbjct: 824 LTMSLPHANRCTLNDCILKFVSGQKVVGWKCPKCQTPREA---------TKKFDFVKLAP 874
Query: 208 YLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTM 267
+++++ RF ++ ++EK T V+FP+ DF L P + A S +++ +
Sbjct: 875 IIVIHLNRFAESGGWLEKRNTAVDFPL--TDFN--LKPYLVADSNSAAISNIRSY--NYN 928
Query: 268 YDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITL--TEAYIQIY 323
Y L A H G G Y + KWY+ D VT++ + T AY+ Y
Sbjct: 929 YSLYAMSNHYGTMEGGHYTAFCKNATQNKWYKYDDQTVTEVTVNQVRSQNTNAYLLFY 986
>gi|355570050|gb|EHH25577.1| hypothetical protein EGK_21432 [Macaca mulatta]
Length = 914
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K + LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 568 NGVKYCRVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQI--- 624
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 625 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 673
Query: 315 LTEAYIQIY 323
E Y+ Y
Sbjct: 674 NAEGYVLFY 682
>gi|402896308|ref|XP_003911245.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 1
[Papio anubis]
gi|402896310|ref|XP_003911246.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 2
[Papio anubis]
Length = 914
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K + LP L +++KRF + K + V+FP++ +D L E ++
Sbjct: 568 NGVKYCRVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQI--- 624
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 625 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 673
Query: 315 LTEAYIQIY 323
E Y+ Y
Sbjct: 674 NAEGYVLFY 682
>gi|296235360|ref|XP_002807922.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Callithrix jacchus]
Length = 927
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 749 IELFTTVETLEKENPWFCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTL 808
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V FP++++DF + + +K + ES E YDL+A H G +G Y
Sbjct: 809 VEFPIRDLDFSEFV---IKPQNESNP--------ELYKYDLIAVSNHYGGMRDGHYTTFA 857
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 858 CNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 892
>gi|219127485|ref|XP_002183965.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404688|gb|EEC44634.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 344
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 124/313 (39%), Gaps = 45/313 (14%)
Query: 32 LVQRFGELMRKLWNPR-NFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLH 90
L++ F EL+R +W+ + KS V L V QF +Q D +FL++ L+ LH
Sbjct: 54 LLEEFAELLRSMWSAKLGEKSPVRFRSQLGKV----NDQFSGADQQDAQEFLNYMLDVLH 109
Query: 91 RALN----GTKKKDSSIVYKTFLGSMKV-------KTRKIPPVELEEKVRQRLLLTEEYK 139
N G + + ++ L +++ + R I +V + +
Sbjct: 110 EDSNKPGEGLYMQSFCVWFRGML-TLRCLSCRFLRRNRSIMADVAMGQVLNTVTCPQCNF 168
Query: 140 ETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKF---------NNESEKEYK 190
+ PF L+ +P + D ++L LT+F +N K
Sbjct: 169 SSRNFDPFNLLSIPIPTAQVAGD--------GMDLGVCLTEFCKTQNLSLSDNWKCPRCK 220
Query: 191 TYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAK 250
+++ + + LP L ++KRF + + EK T +NFP+ +D E A
Sbjct: 221 KFRQG-QQNMNLWRLPDLLTFHLKRFNMSARWREKLTTKINFPLTGLDLRHWCHKESPAV 279
Query: 251 YESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILP 310
M ES++YDL+ + H G + G Y V + + W + D V + P
Sbjct: 280 QVDPM--------ESSVYDLIGVVNHYGSMTGGHYAVSESAEPL--WLQFDDELVEPLAP 329
Query: 311 QMITLTEAYIQIY 323
+ + AY+ Y
Sbjct: 330 EHVVSEMAYVLFY 342
>gi|405960113|gb|EKC26060.1| Ubiquitin carboxyl-terminal hydrolase 15 [Crassostrea gigas]
Length = 923
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 15/140 (10%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ SLP LI+++KRF+ N F+ +K +V FP + ++ KY
Sbjct: 783 KKFDLWSLPDVLIVHLKRFSYNRFYRDKIDALVEFPARGLNL---------KKY------ 827
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
++ + YDL+A H G G Y + +K G+WY D VT +
Sbjct: 828 IINPHHGPVTYDLIAVSNHYGGLGGGHYTAYAKNKDDGEWYYFDDSSVTSSSEDDVVSKA 887
Query: 318 AYIQIYELRTTPSPTAMSEG 337
AY+ +Y+ +T P+A +
Sbjct: 888 AYVLVYQKQTLQQPSAANSA 907
>gi|194756894|ref|XP_001960705.1| GF13485 [Drosophila ananassae]
gi|190622003|gb|EDV37527.1| GF13485 [Drosophila ananassae]
Length = 981
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 22/163 (13%)
Query: 170 PQVNLYTILTKFNNESE----KEYKTYKENFL----KRFEITSLPPYLILYVKRFTKNTF 221
P V LY + F + E Y + N L K + +LP L +++KRF +
Sbjct: 383 PSVTLYDCMASFFSADELKGDNMYSCERCNKLRTGIKYSRVLTLPEVLCIHLKRFRHDLS 442
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
+ K + V FP++ D + + K++ +Y+L + I H G
Sbjct: 443 YSSKISSDVYFPLEGFDMRPYIHKDCKSQV--------------PLYNLSSVICHHGTVG 488
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
G Y + + G+WYE D VT++ P+ + +AY+ Y+
Sbjct: 489 GGHYTCYARNVLNGRWYEFDDQFVTEVSPETVATCQAYVLFYQ 531
>gi|392565614|gb|EIW58791.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 1313
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTP--------EVKA 249
KRF++ LP L++++KRF+ + +K T V+FP++ +D +++ E A
Sbjct: 965 KRFDLWKLPDVLVVHLKRFSNSRMLRDKIDTFVDFPIEGLDLTEMVGERLVGSRLREQGA 1024
Query: 250 KYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDIL 309
E+ D + E YDL H G G YR + + GKWY D +VT+
Sbjct: 1025 DVEALGLDDLD---EPLQYDLFGVDEHLGGLGGGHYRAYALNHLTGKWYHFDDSYVTESR 1081
Query: 310 PQMITLTEAYIQIYELRTT 328
P+ AY+ Y RT+
Sbjct: 1082 PEAAVNGNAYLLFYRRRTS 1100
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP--PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEM 58
L H T L DYFL + Y P P + Q FG LM ++W+P + S +P E
Sbjct: 420 CLAHNTELVDYFLTGV-YQEELNPDNPLGMHGAVAQAFGALMSRIWDPESTMSSYTPREF 478
Query: 59 LQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALN---------------GTKKKDSSI 103
Q + ++ QF +Q D + +++ L+ LH LN G K+ +
Sbjct: 479 KQTLQRFA-PQFSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYVEKPDWEGGGDKELVEL 537
Query: 104 VYKTFLGSMKVKTRKIPPVEL-EEKVRQRLLLTEEYKETETESPFLYLTCDLP 155
++ G MK + V+L + + + L+ E K + T PF+YLT LP
Sbjct: 538 ANTSWEGYMKRNDSVV--VDLFQGQYQSTLVCPECSKVSITFDPFMYLTLPLP 588
>gi|357111554|ref|XP_003557577.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like
[Brachypodium distachyon]
Length = 882
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 15/130 (11%)
Query: 194 ENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYES 253
+ +K+ ++ LP L++++KRF+ F K T V+FP+ ++D L+P + AK+E
Sbjct: 765 QQAMKKLDLWRLPEVLVIHLKRFSYTQFTRNKLETSVDFPISDLD----LSPYIAAKHEQ 820
Query: 254 TMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMI 313
++ Y L A H G G Y +Y +G G WY+ D VT I I
Sbjct: 821 P----------NSHYHLYAISNHYGNMGGGHYTASIYQEGKG-WYKFDDECVTPIREDSI 869
Query: 314 TLTEAYIQIY 323
AY+ Y
Sbjct: 870 KTPAAYVLFY 879
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 72/172 (41%), Gaps = 16/172 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L H T L DYFL + + + P + L FGEL+R LW N + V+PH
Sbjct: 264 CLAHTTKLVDYFLGDYDRDINRTNPLGLNGELALAFGELLRSLWT--NDRKQVAPHHFKA 321
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTK------KKDSSI-----VYKTFL 109
+ ++ QF Q D + L++ L+ LH LN K KD+S V +
Sbjct: 322 KIACFA-PQFSGFNQHDSQELLAFLLDGLHEDLNHVKCKPYEEAKDASGRPDEEVADEYW 380
Query: 110 GSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK 161
+ + + + + L K + T PF+YL+ LP P + K
Sbjct: 381 SNHLARNDSVIVDTCHGQYKSTLTCPTCSKTSVTFDPFMYLS--LPVPSMAK 430
>gi|256081222|ref|XP_002576871.1| ubiquitin-specific peptidase 8 (C19 family) [Schistosoma mansoni]
Length = 1027
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 133/352 (37%), Gaps = 60/352 (17%)
Query: 1 ALCHVTPLRDYFLREIN--YARVKRPPGDSSFLLVQRFGELMRKLWNPRN-------FKS 51
+L H L YFL + A V G +V+ F L+ L+N N F+S
Sbjct: 693 SLSHTRALVHYFLDGFHERQAVVSNRLGYGG-EIVKHFEMLLSALYNQPNQDAELYKFRS 751
Query: 52 HVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGS 111
V+ H+ +F +Q D ++FL + L+ LH LN KK ++S
Sbjct: 752 AVAKHQ----------SKFSSNDQQDSLEFLLFLLDGLHEDLNEVKKNNNST-------K 794
Query: 112 MKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYL--------TCDLPPPPLFKDE 163
+K I E+ + +++ + S F L +C +
Sbjct: 795 LKHNESMIEYTSSNEQAEAAWIQHKDFNNSIIVSSFQGLLRSTVKCNSCHVTSTTFDVFM 854
Query: 164 VLENIIPQ--VNLYTILTKFNNESEKEYKTY--------KENFLKRFEITSLPPYLILYV 213
VL I Q L L F + E + + + K E+ LP YLI+++
Sbjct: 855 VLSLPIEQNKCQLTDCLKLFLEKEEMVGQCRWHCPSCNTRRDASKWIELWKLPTYLIIHL 914
Query: 214 KRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVAN 273
KRF K T V+FP++ +D + V K S+ Y L +
Sbjct: 915 KRFRYEYGNWRKQTTNVDFPIECLDMSSFI---------------VGPKLHSSEYALYSV 959
Query: 274 IVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYEL 325
+ H G +G Y + G+WYE D +V+ + I AYI YEL
Sbjct: 960 LNHRGTMESGHYTTFCRNIRDGRWYEYDDENVSLLDKNEIQNDNAYILFYEL 1011
>gi|109130539|ref|XP_001093504.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 isoform 4
[Macaca mulatta]
Length = 963
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 785 IELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTL 844
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
V FP++++DF + ++ P+ ++ E YDL+ V+N H G +G Y
Sbjct: 845 VEFPIRDLDFSEFVIQPQNESNPELYKYDLIA----------VSN--HYGGMRDGHYTTF 892
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 893 ACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 928
>gi|355704756|gb|EHH30681.1| Ubiquitin carboxyl-terminal hydrolase 11 [Macaca mulatta]
Length = 929
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 751 IELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTL 810
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
V FP++++DF + ++ P+ ++ E YDL+ V+N H G +G Y
Sbjct: 811 VEFPIRDLDFSEFVIQPQNESNPELYKYDLIA----------VSN--HYGGMRDGHYTTF 858
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 859 ACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 894
>gi|194764571|ref|XP_001964402.1| GF23156 [Drosophila ananassae]
gi|190614674|gb|EDV30198.1| GF23156 [Drosophila ananassae]
Length = 899
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 133/303 (43%), Gaps = 37/303 (12%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
+++ L+++LWN + +K S L+ VV +K F+ +Q D +FL+ ++ LH
Sbjct: 613 VIEEVAALIKELWNGQ-YKCVASRD--LRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHS 669
Query: 92 ALN----GTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPF 147
L +++ S K +L K K I + +++ + KE+ T F
Sbjct: 670 DLQTLHVARQRETISASEKAWLEFTKAKESMILHL-FYGQIKSTVKCVACNKESATYECF 728
Query: 148 LYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKT----YKENFLKRFEIT 203
L+ +LPP + + Q+N + F+ E + + K + +K+ +I+
Sbjct: 729 SNLSLELPP---------NSNVCQLN-QCMDMYFSGERIQGWNCPNCNTKRDAIKKLDIS 778
Query: 204 SLPPYLILYVKRFTK---NTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVK 260
LPP L++++KRF NT K + FP+ N++ +TP + A+ ES +
Sbjct: 779 KLPPVLVVHLKRFYADPGNTGAYIKKQNYLRFPLDNLE----MTPYI-ARAES------R 827
Query: 261 AKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYI 320
A T Y L A H G G Y G+W++ D V+ + + + AYI
Sbjct: 828 AVTPKT-YQLYAVSNHYGTMEGGHYTAFCKSANYGRWFKFDDQIVSALDTSNVVSSAAYI 886
Query: 321 QIY 323
Y
Sbjct: 887 LFY 889
>gi|355757316|gb|EHH60841.1| Ubiquitin carboxyl-terminal hydrolase 11 [Macaca fascicularis]
Length = 933
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 755 IELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTL 814
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
V FP++++DF + ++ P+ ++ E YDL+ V+N H G +G Y
Sbjct: 815 VEFPIRDLDFSEFVIQPQNESNPELYKYDLIA----------VSN--HYGGMRDGHYTTF 862
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 863 ACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 898
>gi|363737746|ref|XP_003641901.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Gallus
gallus]
Length = 1116
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 145/345 (42%), Gaps = 54/345 (15%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFL-----LVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L +YF + + + R S+FL + + FG +M+ LW + +K ++SP
Sbjct: 792 CLCNAPHLAEYFNKNLYQDDINR----SNFLGHKGEVAEEFGVIMKALWTGQ-YK-YISP 845
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYK----TFLGS 111
+ + + QF Q D + L + ++ LH LN K D+ YK L
Sbjct: 846 KD-FKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLN---KADNRKRYKEENNDHLDD 901
Query: 112 MKVK----------TRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK 161
+K I + + + + +K++ T F+YL+ LP K
Sbjct: 902 LKAAELAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLS--LPLASTSK 959
Query: 162 DEVLENIIPQVNLYTILTKF--NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKN 219
+ E + L++ K NN + + + LK+ EI LPP L++++KRF+ +
Sbjct: 960 CTLQECL----RLFSKEEKLTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRFSYD 1015
Query: 220 TFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG 278
+ +K T V+FP++ +D ++ P+ K Y+L + H G
Sbjct: 1016 GRWKQKLQTSVDFPLETLDLSQYVIGPKNNLK----------------RYNLFSVSNHYG 1059
Query: 279 EPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + +W++ D V++I + + AYI Y
Sbjct: 1060 GLDGGHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFY 1104
>gi|414877602|tpg|DAA54733.1| TPA: hypothetical protein ZEAMMB73_341521 [Zea mays]
Length = 888
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+ ++ LP LI+++KRF+ + + K T V+FP+ ++D +KY
Sbjct: 757 KKLDLWRLPEILIIHLKRFSYSRYTKNKLETFVDFPIHDLDL---------SKYIGHRCQ 807
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
V Y L A H G G Y ++YH+G WY+ D HV I I +
Sbjct: 808 DVPHNYR-----LYATSNHYGSLGGGHYTAYVYHEGKKGWYDFDDRHVGPITEDSIKTSA 862
Query: 318 AYIQIY 323
AY+ Y
Sbjct: 863 AYVLFY 868
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 67/173 (38%), Gaps = 28/173 (16%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWN-------PRNFKSHV 53
L H + L DYFL + + P L FG+L+RKLW PR FK+ +
Sbjct: 291 CLAHTSKLVDYFLGDFHKEVNPHNPLGMKGELAYAFGDLLRKLWAIDRTPVAPRQFKARL 350
Query: 54 SPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTK------KKDSSI---- 103
QF Q D + L++ L+ LH LN K KDS
Sbjct: 351 GRFA----------PQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKPYSEAKDSDGRPDE 400
Query: 104 -VYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLP 155
V + G+ + I + + + L+ K + T PF+YL+ LP
Sbjct: 401 EVADEYWGNHLARNDSIIVDICQGQYKSTLVCPICKKVSVTFDPFMYLSLPLP 453
>gi|402909992|ref|XP_003917678.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Papio anubis]
Length = 963
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 785 IELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTL 844
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
V FP++++DF + ++ P+ ++ E YDL+ V+N H G +G Y
Sbjct: 845 VEFPIRDLDFSEFVIQPQNESNPELYKYDLIA----------VSN--HYGGMRDGHYTTF 892
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 893 ACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 928
>gi|195485907|ref|XP_002091282.1| GE13566 [Drosophila yakuba]
gi|194177383|gb|EDW90994.1| GE13566 [Drosophila yakuba]
Length = 985
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 22/162 (13%)
Query: 170 PQVNLYTILTKFNNESE----KEYKTYKENFLK---RFE-ITSLPPYLILYVKRFTKNTF 221
P V LY + F + E Y + N L+ +F + +LP L +++KRF +
Sbjct: 396 PSVTLYDCMASFFSADELKGDNMYSCERCNKLRTGIKFSRVLTLPEVLCIHLKRFRNDLS 455
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
+ K + V FP++ D + + K+ E +Y+L + I H G
Sbjct: 456 YSSKISSDVYFPLEGFDMRPYIHKDCKS--------------EVAIYNLSSVICHHGTVG 501
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + GKWYE D VT++ +++ +AY+ Y
Sbjct: 502 GGHYTCYARNALNGKWYEFDDQFVTEVSSELVQSCQAYVLFY 543
>gi|343474167|emb|CCD14121.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 555
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 126/318 (39%), Gaps = 46/318 (14%)
Query: 6 TPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLW 65
TPL YFL + NYAR G+ S LV F ++R+L+ + VSP A+
Sbjct: 248 TPLGSYFLYD-NYARDVVNVGEGSCRLVNSFCFVVRELYRI-DCTLPVSPSPFKNAISEL 305
Query: 66 SRKQFQFTEQSDPIDFLSWFLNTLHRALNG------------TKKKDSSIVYKTFLGSMK 113
S F +Q D +FL L LH LN T + + K F
Sbjct: 306 SNTFSGFLQQ-DANEFLRIVLEGLHNGLNDRVNVKVIPTEIDTMVGSDAEIAKRFWDQHI 364
Query: 114 VKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVN 173
+ + + + R ++ K + + +P L + D+P P D +E+ + N
Sbjct: 365 QRNNSVVVDKCAFQERSSIVCPLCRKVSRSFTPLLGI--DVPIPVETADISIEDCL---N 419
Query: 174 LYTILTKFNNESEKEYKTYKE--NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVN 231
Y K ++S + K+ + K+ + SLP L + +KRF+ +
Sbjct: 420 AYCREEKLGSDSLYHCSSCKQYVDASKQLLLYSLPKILFVTIKRFSSH------------ 467
Query: 232 FPVKNVDFGDILTPEVKAKY---ESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
G+IL+ VK + E M + + E T+Y LV + H G G Y
Sbjct: 468 --------GEILSKLVKRVFFRKELDMGPYICSTIEKTVYTLVGVVNHTGGIKGGHYTAD 519
Query: 289 LYHKGIGKWYEIQDLHVT 306
Y+ G W+ + D VT
Sbjct: 520 -YYDGHSTWFSVSDERVT 536
>gi|332243835|ref|XP_003271077.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Nomascus
leucogenys]
Length = 963
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 785 IELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTL 844
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
V FP++++DF + ++ P+ ++ E YDL+ V+N H G +G Y
Sbjct: 845 VEFPIRDLDFSEFVIQPQNESNPELYKYDLIA----------VSN--HYGGMRDGHYTTF 892
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 893 ACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 928
>gi|332018399|gb|EGI58993.1| Ubiquitin carboxyl-terminal hydrolase 2 [Acromyrmex echinatior]
Length = 749
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 122/336 (36%), Gaps = 33/336 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L + PL +Y L E + L++ F ++ +LW HV L+
Sbjct: 427 CLSNTRPLLEYLLNEQYLTDINTTTSSMKGALIKAFSQVTHELWEVGG--DHVVNTTALK 484
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK---------DSSIVYKTFLGS 111
+ + +F Q D +FL + L LH +N K DS + + S
Sbjct: 485 SQIQRFAPRFMGYSQQDAQEFLRYLLEGLHEDVNRVTTKLPPIHGDIPDSYTDMQKAVES 544
Query: 112 MKVKTRKIPPVELE---EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENI 168
K R ++ ++R L T + T PF L+ LP P L
Sbjct: 545 WKRYLRSEDSTIVDVFVGQLRSSLRCTSCDHVSVTLDPFWDLS--LPIPARSGTVKLSQC 602
Query: 169 IPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPT 228
+ +L + + + + K F I P L++++KRF+ F K
Sbjct: 603 LEHFTREEVLDGDEKPTCSKCQ-MRRKCTKSFSIQKFPKILVIHLKRFSPMERFRGKLNV 661
Query: 229 IVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
+V+FP+ +D P V Y+L H G +G Y +
Sbjct: 662 MVDFPLTGLDLSAFAAPRVPG----------------CTYNLYGVANHSGTTYSGHYTAY 705
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
H G+W+E D V+ + + + +EAY+ YE
Sbjct: 706 CKHPYSGEWHEYNDSRVSVVSSRSVVSSEAYVLFYE 741
>gi|397476700|ref|XP_003809730.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Pan paniscus]
Length = 973
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 778 IELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTL 837
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
V FP++++DF + ++ P+ ++ E YDL+ V+N H G +G Y
Sbjct: 838 VEFPIRDLDFSEFVIQPQNESNPELYKYDLIA----------VSN--HYGGMRDGHYTTF 885
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE----LRTTPSPTAMS 335
+K G+W+ D V+ + I AY+ Y+ R SP S
Sbjct: 886 ACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQDVARRLLSPAGSS 936
>gi|195439036|ref|XP_002067437.1| GK16418 [Drosophila willistoni]
gi|194163522|gb|EDW78423.1| GK16418 [Drosophila willistoni]
Length = 1396
Score = 58.5 bits (140), Expect = 5e-06, Method: Composition-based stats.
Identities = 86/346 (24%), Positives = 126/346 (36%), Gaps = 60/346 (17%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
L H T L FLR + +R D L F +L++++W N + V+P E+ +A
Sbjct: 1086 LSHTTELTR-FLRTHHGSRSSSATKDQQIL--HEFAKLIQEMWTT-NVHT-VTPMELKRA 1140
Query: 62 VVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPP 121
R F +Q D +FL +FL++LH ALN K ++ L K
Sbjct: 1141 FSTKHRMYSDFNQQ-DAQEFLRFFLDSLHSALNTGVKGGEALNIDDNLSDNKKADLTWDW 1199
Query: 122 VELEEKVRQRLLLTEEYKET----------ETESPFLYLTCDLPPPP-----------LF 160
E R L + K T T PF L+ LPP
Sbjct: 1200 YTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPPSSSRCKLDACLDLFI 1259
Query: 161 KDEVLE-NIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKN 219
++EVL+ + +P + K F I P YL++++KRF++
Sbjct: 1260 REEVLDGDEMPTCSKCKTRRKCKKS---------------FTIQRFPKYLVIHLKRFSET 1304
Query: 220 TFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGE 279
+ K +V FP + E M S Y L A H G
Sbjct: 1305 RW--SKLLNVVEFPTSD--------------RELNMGSYGSNSNSSVHYSLYAISNHMGS 1348
Query: 280 PSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQ-MITLTEAYIQIYE 324
+ G Y H KW+E D V+D L + + AYI YE
Sbjct: 1349 TAGGHYVALCKHPDSRKWHEFNDNIVSDTLSENFLVSASAYILFYE 1394
>gi|24234683|ref|NP_004642.2| ubiquitin carboxyl-terminal hydrolase 11 [Homo sapiens]
gi|251757432|sp|P51784.3|UBP11_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 11; AltName:
Full=Deubiquitinating enzyme 11; AltName: Full=Ubiquitin
thioesterase 11; AltName:
Full=Ubiquitin-specific-processing protease 11
gi|187954551|gb|AAI40850.1| Ubiquitin specific peptidase 11 [Homo sapiens]
Length = 963
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 785 IELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTL 844
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
V FP++++DF + ++ P+ ++ E YDL+ V+N H G +G Y
Sbjct: 845 VEFPIRDLDFSEFVIQPQNESNPELYKYDLIA----------VSN--HYGGMRDGHYTTF 892
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE----LRTTPSPTAMS 335
+K G+W+ D V+ + I AY+ Y+ R SP S
Sbjct: 893 ACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQDVARRLLSPAGSS 943
>gi|170063255|ref|XP_001867024.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880931|gb|EDS44314.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1198
Score = 58.5 bits (140), Expect = 5e-06, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 22/158 (13%)
Query: 170 PQVNLYTILTKFNNESEKE----YKTYK----ENFLKRFEITSLPPYLILYVKRFTKNTF 221
P V+L+ + F + E + Y K N +K + +LP L +++KRF +
Sbjct: 508 PAVSLHDCMAAFFSADELKGDNMYSCEKCNKLRNGVKYSRVLALPEMLCVHLKRFRHDLS 567
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
+ K + V+FP+ +D L + K+ E T YDL A I H G
Sbjct: 568 YSSKISSPVHFPLNGLDMRPYLHKDCKS--------------EVTSYDLCAVICHHGTVG 613
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAY 319
G Y H GKW+E D VT + P+ + EA+
Sbjct: 614 GGHYTSFAKHDPTGKWFEFDDQLVTHVSPEDVQNCEAF 651
>gi|380798193|gb|AFE70972.1| ubiquitin carboxyl-terminal hydrolase 11, partial [Macaca mulatta]
Length = 904
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 726 IELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTL 785
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
V FP++++DF + ++ P+ ++ E YDL+ V+N H G +G Y
Sbjct: 786 VEFPIRDLDFSEFVIQPQNESNPELYKYDLIA----------VSN--HYGGMRDGHYTTF 833
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 834 ACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 869
>gi|119579693|gb|EAW59289.1| ubiquitin specific peptidase 11, isoform CRA_b [Homo sapiens]
gi|168277940|dbj|BAG10948.1| ubiquitin carboxyl-terminal hydrolase 11 [synthetic construct]
Length = 920
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 742 IELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTL 801
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
V FP++++DF + ++ P+ ++ E YDL+ V+N H G +G Y
Sbjct: 802 VEFPIRDLDFSEFVIQPQNESNPELYKYDLIA----------VSN--HYGGMRDGHYTTF 849
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE----LRTTPSPTAMS 335
+K G+W+ D V+ + I AY+ Y+ R SP S
Sbjct: 850 ACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQDVARRLLSPAGSS 900
>gi|157817586|ref|NP_001099972.1| ubiquitin carboxyl-terminal hydrolase 8 [Rattus norvegicus]
gi|149023197|gb|EDL80091.1| ubiquitin specific protease 8 (predicted) [Rattus norvegicus]
Length = 1081
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 143/356 (40%), Gaps = 76/356 (21%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 757 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 810
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT------------------- 96
+ + + QF + Q D + L + ++ LH LN
Sbjct: 811 KD-FKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKA 869
Query: 97 --------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFL 148
K+ + SI+ F G K + + +K++ T F+
Sbjct: 870 AEHAWQKHKQLNESIIVALFQGQFKSTVQCLTC----------------HKKSRTFEAFM 913
Query: 149 YLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPY 208
YL+ LP K L++ + + LT NN + + + LK+ EI LPP
Sbjct: 914 YLS--LPLASTSKC-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPV 969
Query: 209 LILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTM 267
L++++KRF+ + + +K T V+FP++N+D ++ P+ K
Sbjct: 970 LLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKSSLK----------------K 1013
Query: 268 YDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
Y+L + H G G Y + + +W++ D V+DI + + AYI Y
Sbjct: 1014 YNLFSVSNHYGGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1069
>gi|39795322|gb|AAH63668.1| USP11 protein, partial [Homo sapiens]
Length = 923
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 745 IELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTL 804
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
V FP++++DF + ++ P+ ++ E YDL+ V+N H G +G Y
Sbjct: 805 VEFPIRDLDFSEFVIQPQNESNPELYKYDLIA----------VSN--HYGGMRDGHYTTF 852
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE----LRTTPSPTAMS 335
+K G+W+ D V+ + I AY+ Y+ R SP S
Sbjct: 853 ACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQDVARRLLSPAGSS 903
>gi|38197496|gb|AAH00350.4| USP11 protein, partial [Homo sapiens]
Length = 921
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 743 IELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTL 802
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
V FP++++DF + ++ P+ ++ E YDL+ V+N H G +G Y
Sbjct: 803 VEFPIRDLDFSEFVIQPQNESNPELYKYDLIA----------VSN--HYGGMRDGHYTTF 850
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE----LRTTPSPTAMS 335
+K G+W+ D V+ + I AY+ Y+ R SP S
Sbjct: 851 ACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQDVARRLLSPAGSS 901
>gi|410986643|ref|XP_003999619.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1
[Felis catus]
gi|410986645|ref|XP_003999620.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2
[Felis catus]
gi|410986647|ref|XP_003999621.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 3
[Felis catus]
Length = 566
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 137/359 (38%), Gaps = 56/359 (15%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L PLRD+ LR V P G + L + F +++ LW+P + ++ V+P +
Sbjct: 230 CLSSTRPLRDFCLRRDFRQEV--PGGGRAQELTEAFADVIGALWHPDSCEA-VNP-TRFR 285
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
AV F Q D +FL + LH +N ++ + I+ G+ + R+
Sbjct: 286 AVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAAPILAS---GAAASQPRRGG 342
Query: 121 PV----ELEEKVRQRLLLTEEYKETETESPFLYLT---------------------CDLP 155
+ EL + R L+ + +++ L++ CDL
Sbjct: 343 ALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLS 402
Query: 156 PPPLFKDEVLENIIPQVNLYTILTKFNN-ESEK----EYKTYKENFLKRFEITSLPPYLI 210
P + K + + + + TK ESE + K K+ + P L+
Sbjct: 403 LP-IPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILV 461
Query: 211 LYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDL 270
L++ RF+ + ++K+ V+FP++ + GD + K S +Y L
Sbjct: 462 LHLNRFSASRGSIKKSSVGVDFPLQRLSLGDFAS----------------DKAGSPIYQL 505
Query: 271 VANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTP 329
A H G G Y L G W+ D V+ + + +E Y+ Y+L P
Sbjct: 506 YALCNHSGSVHYGHY-TALCRCQTG-WHVYNDSRVSPVSENQVASSEGYVLFYQLMQEP 562
>gi|47219848|emb|CAF97118.1| unnamed protein product [Tetraodon nigroviridis]
Length = 977
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+FP++ ++ L + ++
Sbjct: 576 NGVKYCKVLKLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLNMQPFLAKDSPSQV--- 632
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 633 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 681
Query: 315 LTEAYIQIYEL 325
EAY+ Y L
Sbjct: 682 NAEAYVLFYRL 692
>gi|23503563|dbj|BAC20463.1| deubiquitinating enzyme [Homo sapiens]
Length = 921
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 743 IELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTL 802
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
V FP++++DF + ++ P+ ++ E YDL+ V+N H G +G Y
Sbjct: 803 VEFPIRDLDFSEFVIQPQNESNPELYKYDLIA----------VSN--HYGGMRDGHYTTF 850
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE----LRTTPSPTAMS 335
+K G+W+ D V+ + I AY+ Y+ R SP S
Sbjct: 851 ACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQDVARRLLSPAGSS 901
>gi|401883333|gb|EJT47546.1| ubiquitin-specific protease [Trichosporon asahii var. asahii CBS
2479]
Length = 1164
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 90/347 (25%), Positives = 140/347 (40%), Gaps = 49/347 (14%)
Query: 8 LRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSR 67
L ++ +E+N G+ L F EL+ LW + + +SP Q ++ +
Sbjct: 832 LDGHYKKEVNLTNTLGTRGN----LAHAFAELLSALW--KEHYTFLSPITFRQKSIINFK 885
Query: 68 KQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEK 127
F TEQ D +FLS+ ++ LH LN + K + + + +PP +K
Sbjct: 886 SDFAGTEQHDSQEFLSFVMDGLHEDLNRVRVKPKPV---EMTPQREAELETLPPQIASDK 942
Query: 128 ----VRQR-------LLLTEEYKETETESPFLYLTCDLPP-------PPLFKDEVLENII 169
+QR + + E + +LT DLP P LF V I+
Sbjct: 943 EWAIYKQRNDSFIVDVFQGQYMNRMECLTCHKWLTLDLPTSRKPIVLPELFDRYVQPEIL 1002
Query: 170 ------PQV-NLYTILT-KFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRF--TKN 219
P++ L LT +F +K + K I LPP L++ +KRF
Sbjct: 1003 DGDDKCPKLRQLRPKLTYRFCPRCKKNRRASKT-----MTIVRLPPVLMIQLKRFLPVNG 1057
Query: 220 TFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYE--STMYDLVANIVHD 277
F +K+ T V FP+KN+D LT V + + DL + + YDL A H
Sbjct: 1058 GQFWDKSDTPVIFPLKNLD----LTRYVPVRQPNGTEDLDDPRTQIGPFKYDLYAVSNHM 1113
Query: 278 GEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
G S+G + + KG W +D VT Q + AYI Y+
Sbjct: 1114 GTLSSG-HSDTAFVKGSDHWSFCEDSRVTPATEQDVVNRPAYILFYK 1159
>gi|403413657|emb|CCM00357.1| predicted protein [Fibroporia radiculosa]
Length = 1285
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Query: 197 LKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTP-EVKAKYESTM 255
+KRF++ +P L++++KRF+ + +K T V+FP+ +D ++ +V +
Sbjct: 943 MKRFDLWKVPDVLVVHLKRFSNSRTLRDKIDTFVDFPINGLDISPMVGERQVAQRLVEQG 1002
Query: 256 YDLVKAKY----ESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQ 311
D+ + E +YDL A H G G YR + Y+ KWY D +V+ + P+
Sbjct: 1003 VDIAQLGLSDIDEPLIYDLYAVDEHLGGLGGGHYRAYAYNDTTDKWYHFDDSYVSPVQPE 1062
Query: 312 MITLTEAYIQIYELRTT 328
AY+ Y+ RT+
Sbjct: 1063 AAVNANAYLLFYKRRTS 1079
Score = 47.0 bits (110), Expect = 0.012, Method: Composition-based stats.
Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 2 LCHVTPLRDYFLREINYARVKRP--PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L H L DYFL + + P P + Q FG L++++W + + SP E
Sbjct: 395 LAHTKELMDYFLTGV-FEEELNPDNPLGMQGAIAQAFGALLQRIWATGSSSTSYSPREFK 453
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK------------DSSIV--- 104
QA+ ++ QF +Q D + +++ L+ LH LN KK D +V
Sbjct: 454 QALQRFA-PQFSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYVEKPDWEGGGDKELVGLA 512
Query: 105 YKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETE-TESPFLYLTCDLP 155
+++ G M+ I V+L + Q L+ E ++ T PF+YLT LP
Sbjct: 513 NESWQGYMRRNDSVI--VDLFQGQYQSTLVCPECEKVSITFDPFMYLTLPLP 562
>gi|55846814|gb|AAV67411.1| ubiquitin-specific protease 11 [Macaca fascicularis]
Length = 679
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 509 IELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTL 568
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
V FP++++DF + ++ P+ ++ E YDL+ V+N H G +G Y
Sbjct: 569 VEFPIRDLDFSEFVIQPQNESNPELYKYDLIA----------VSN--HYGGMRDGHYTTF 616
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 617 ACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 652
>gi|240256325|ref|NP_568411.4| ubiquitin-specific protease 8 [Arabidopsis thaliana]
gi|240256327|ref|NP_851052.4| ubiquitin-specific protease 8 [Arabidopsis thaliana]
gi|332005587|gb|AED92970.1| ubiquitin-specific protease 8 [Arabidopsis thaliana]
gi|332005588|gb|AED92971.1| ubiquitin-specific protease 8 [Arabidopsis thaliana]
Length = 913
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 15/128 (11%)
Query: 197 LKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMY 256
+K+ ++ LP L++++KRF+ + F K V+FP+ N+D L+ + K T Y
Sbjct: 797 IKKLDLWRLPEILVIHLKRFSYSRFMKNKLEAYVDFPLDNLD----LSSYISYKNGQTTY 852
Query: 257 DLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLT 316
Y L A H G G Y +++H G +WY+ D HV I + I +
Sbjct: 853 ----------RYMLYAISNHYGSMGGGHYTAYVHHGG-DRWYDFDDSHVHQISQEKIKTS 901
Query: 317 EAYIQIYE 324
AY+ Y+
Sbjct: 902 AAYVLFYK 909
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 1 ALCHVTPLRDYFL----REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPH 56
L H L D+FL +EIN + P G + + FG+L+R LW P S V+P
Sbjct: 338 CLAHTPKLVDFFLGEYSKEIN---LDNPLGMKGEIALA-FGDLLRSLWAPG--ASTVAPR 391
Query: 57 EMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK 99
+A + QF Q D + L++ L+ LH LN K K
Sbjct: 392 -TFKAKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKNK 433
>gi|194883136|ref|XP_001975660.1| GG20435 [Drosophila erecta]
gi|190658847|gb|EDV56060.1| GG20435 [Drosophila erecta]
Length = 980
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 22/162 (13%)
Query: 170 PQVNLYTILTKFNNESE----KEYKTYKENFL----KRFEITSLPPYLILYVKRFTKNTF 221
P V LY + F + E Y + N L K + +LP L +++KRF +
Sbjct: 396 PSVTLYDCMASFFSADELKGDNMYSCERCNKLRTGIKYSRVLTLPEVLCIHLKRFRNDLS 455
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
+ K + V FP++ D + + K+ E +Y+L + I H G
Sbjct: 456 YSSKISSDVYFPLEGFDMRPYIHKDCKS--------------EVAIYNLSSVICHHGTVG 501
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
+G Y + + GKWYE D VT++ +++ +AY+ Y
Sbjct: 502 SGHYTCYARNALNGKWYEFDDQFVTEVPSELVQSCQAYVLFY 543
>gi|195568052|ref|XP_002107569.1| GD17542 [Drosophila simulans]
gi|194204979|gb|EDX18555.1| GD17542 [Drosophila simulans]
Length = 398
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 126/304 (41%), Gaps = 35/304 (11%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
++ F +L+ ++W N + V+P E+ +A R + +Q D +FL +FL++LH
Sbjct: 117 ILHEFAKLIHEMWTS-NVHT-VTPMELKRAFSTKHRMYSDYNQQ-DAQEFLRFFLDSLHS 173
Query: 92 ALNGTKKKDSSIVYKTFLGSMKVK------TRKIPPVELE---EKVRQRLLLTEEYKETE 142
ALN K ++ + + K TR + + +++ L T +
Sbjct: 174 ALNSGVKGETLNIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSV 233
Query: 143 TESPFLYLTCDLPPPPLFK-DEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFE 201
T PF L+ LP K D L+ I + +L + + KT ++ K F
Sbjct: 234 TFDPFWDLSVPLPSSSRCKLDACLDLFIRE----EVLDGDEMPTCAKCKTRRK-CTKSFT 288
Query: 202 ITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKA 261
I P YL++++KRF++ + K IV FP + + A S ++
Sbjct: 289 IQRFPKYLVIHLKRFSETRW--SKLSNIVEFPTSDSELN---MGSYGANSNSNVH----- 338
Query: 262 KYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQ-MITLTEAYI 320
Y L A H G + G Y H KW+E D V+D L + + + AYI
Sbjct: 339 ------YSLYAISNHMGSTAGGHYVALCKHPVSRKWHEFNDNIVSDALSENHLVSSSAYI 392
Query: 321 QIYE 324
YE
Sbjct: 393 LFYE 396
>gi|296084018|emb|CBI24406.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 15/126 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+ ++ LP L++++KRF+ + F K T V+FPV N+D +T
Sbjct: 805 KKLDLWRLPEILVIHLKRFSYSRFMKNKLETYVDFPVDNLDLSTYITH------------ 852
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
K S Y L A H G G Y ++H G +WY+ D HV+ I I +
Sbjct: 853 --KNGMVSNRYMLYAVSNHYGSMGGGHYTAFVHHGG-DQWYDFDDSHVSPIPEDKIKTSA 909
Query: 318 AYIQIY 323
AY+ Y
Sbjct: 910 AYVLFY 915
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 24/171 (14%)
Query: 1 ALCHVTPLRDYFL----REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPH 56
L H L DYFL REIN+ G+ + FG+L+RKLW P + V+P
Sbjct: 277 CLAHTPKLVDYFLGDYSREINHENALGMDGE----IALAFGDLIRKLWAPG--ATPVAP- 329
Query: 57 EMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK------------DSSIV 104
M ++ + QF Q D + L++ L+ LH LN K K D +
Sbjct: 330 RMFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKPYIEAKDGEGWPDEEVA 389
Query: 105 YKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLP 155
+ + + I V + + R L+ K + T PF+YL+ LP
Sbjct: 390 DEYWRNHLARNDSIIVDVS-QGQYRSTLVCPVCKKVSITFDPFMYLSLPLP 439
>gi|1276912|gb|AAC50450.1| UHX1 protein [Homo sapiens]
gi|119579692|gb|EAW59288.1| ubiquitin specific peptidase 11, isoform CRA_a [Homo sapiens]
gi|194378128|dbj|BAG57814.1| unnamed protein product [Homo sapiens]
gi|1588732|prf||2209322A UHX1 gene
Length = 690
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 512 IELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTL 571
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
V FP++++DF + ++ P+ ++ E YDL+ V+N H G +G Y
Sbjct: 572 VEFPIRDLDFSEFVIQPQNESNPELYKYDLIA----------VSN--HYGGMRDGHYTTF 619
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 620 ACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 655
>gi|193786257|dbj|BAG51540.1| unnamed protein product [Homo sapiens]
Length = 689
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 172 VNLYTILTKFNNESEKEYKTYKENFL--KRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T + E+ + K++ L K+ ++ LP LI+++KRF+ F EK T+
Sbjct: 511 IELFTTVETLEKENPWYCPSCKQHQLATKKLDLWMLPEILIIHLKRFSYTKFSREKLDTL 570
Query: 230 VNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVH 288
V FP++++DF + ++ P+ ++ E YDL+ V+N H G +G Y
Sbjct: 571 VEFPIRDLDFSEFVIQPQNESNPELYKYDLIA----------VSN--HYGGMRDGHYTTF 618
Query: 289 LYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
+K G+W+ D V+ + I AY+ Y+
Sbjct: 619 ACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQ 654
>gi|13374862|emb|CAC34496.1| ubiquitin-specific protease-like protein [Arabidopsis thaliana]
Length = 901
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 15/128 (11%)
Query: 197 LKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMY 256
+K+ ++ LP L++++KRF+ + F K V+FP+ N+D L+ + K T Y
Sbjct: 785 IKKLDLWRLPEILVIHLKRFSYSRFMKNKLEAYVDFPLDNLD----LSSYISYKNGQTTY 840
Query: 257 DLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLT 316
Y L A H G G Y +++H G +WY+ D HV I + I +
Sbjct: 841 ----------RYMLYAISNHYGSMGGGHYTAYVHHGG-DRWYDFDDSHVHQISQEKIKTS 889
Query: 317 EAYIQIYE 324
AY+ Y+
Sbjct: 890 AAYVLFYK 897
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 1 ALCHVTPLRDYFL----REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPH 56
L H L D+FL +EIN + P G + + FG+L+R LW P S V+P
Sbjct: 326 CLAHTPKLVDFFLGEYSKEIN---LDNPLGMKGEIALA-FGDLLRSLWAPG--ASTVAPR 379
Query: 57 EMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK 99
+A + QF Q D + L++ L+ LH LN K K
Sbjct: 380 -TFKAKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKNK 421
>gi|359479088|ref|XP_003632213.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Vitis
vinifera]
Length = 882
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 15/126 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+ ++ LP L++++KRF+ + F K T V+FPV N+D +T
Sbjct: 766 KKLDLWRLPEILVIHLKRFSYSRFMKNKLETYVDFPVDNLDLSTYITH------------ 813
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
K S Y L A H G G Y ++H G +WY+ D HV+ I I +
Sbjct: 814 --KNGMVSNRYMLYAVSNHYGSMGGGHYTAFVHHGG-DQWYDFDDSHVSPIPEDKIKTSA 870
Query: 318 AYIQIY 323
AY+ Y
Sbjct: 871 AYVLFY 876
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 24/171 (14%)
Query: 1 ALCHVTPLRDYFL----REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPH 56
L H L DYFL REIN+ G+ + FG+L+RKLW P + V+P
Sbjct: 301 CLAHTPKLVDYFLGDYSREINHENALGMDGE----IALAFGDLIRKLWAPG--ATPVAP- 353
Query: 57 EMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK------------DSSIV 104
M ++ + QF Q D + L++ L+ LH LN K K D +
Sbjct: 354 RMFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKPYIEAKDGEGWPDEEVA 413
Query: 105 YKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLP 155
+ + + I V + + R L+ K + T PF+YL+ LP
Sbjct: 414 DEYWRNHLARNDSIIVDVS-QGQYRSTLVCPVCKKVSITFDPFMYLSLPLP 463
>gi|257050978|sp|Q9C585.2|UBP8_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
Full=Deubiquitinating enzyme 8; Short=AtUBP8; AltName:
Full=Ubiquitin thioesterase 8; AltName:
Full=Ubiquitin-specific-processing protease 8
Length = 871
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 15/128 (11%)
Query: 197 LKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMY 256
+K+ ++ LP L++++KRF+ + F K V+FP+ N+D L+ + K T Y
Sbjct: 755 IKKLDLWRLPEILVIHLKRFSYSRFMKNKLEAYVDFPLDNLD----LSSYISYKNGQTTY 810
Query: 257 DLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLT 316
Y L A H G G Y +++H G +WY+ D HV I + I +
Sbjct: 811 ----------RYMLYAISNHYGSMGGGHYTAYVHHGG-DRWYDFDDSHVHQISQEKIKTS 859
Query: 317 EAYIQIYE 324
AY+ Y+
Sbjct: 860 AAYVLFYK 867
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 1 ALCHVTPLRDYFL----REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPH 56
L H L D+FL +EIN + P G + + FG+L+R LW P S V+P
Sbjct: 296 CLAHTPKLVDFFLGEYSKEIN---LDNPLGMKGEIALA-FGDLLRSLWAPG--ASTVAPR 349
Query: 57 EMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK 99
+A + QF Q D + L++ L+ LH LN K K
Sbjct: 350 -TFKAKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKNK 391
>gi|417405449|gb|JAA49435.1| Putative ubiquitin carboxyl-terminal hydrolase 4 [Desmodus
rotundus]
Length = 963
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL DYFLR+ A + R P + + + EL++++W+ R+ ++V+P M
Sbjct: 319 CLSNTAPLTDYFLRDEYEAEINRDNPLGMKGEIAETYAELIKQMWSGRD--AYVAPR-MF 375
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 376 KTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEA 435
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL +D V+E
Sbjct: 436 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKRDRVME 490
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F++ +LP L++++KRF+ + ++ +K T+V FP++ ++ + + Y
Sbjct: 809 KKFDLWALPKILVVHLKRFSYSRYWRDKLDTVVEFPIRGLNMSEFVCDPSARPY------ 862
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+YDL+A H G G Y + +K KWY D +V+ I
Sbjct: 863 ---------VYDLIAVSNHYGAMGVGHYTAYAKNKLNRKWYYFDDSNVSLASEDQIVTKA 913
Query: 318 AYIQIYELR 326
AY+ Y+ R
Sbjct: 914 AYVLFYQRR 922
>gi|148234990|ref|NP_001080551.1| ubiquitin specific peptidase 8 [Xenopus laevis]
gi|27697056|gb|AAH43910.1| Usp8-prov protein [Xenopus laevis]
Length = 1063
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 140/340 (41%), Gaps = 45/340 (13%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFL-----LVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L +YF + A + R S+ L + + FG +M+ LW + +K +SP
Sbjct: 740 CLCNTPHLAEYFNKNCYQADINR----SNLLGHKGEVAEEFGCIMKALWTGQ-YKC-ISP 793
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK------------DSSI 103
+ + + +QF D + L + ++ LH LN + DS
Sbjct: 794 KD-FKITIGKINEQFAGYSHQDSQELLLFLMDGLHEDLNKADNRKRQKEENNDHLSDSQA 852
Query: 104 VYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDE 163
+ ++ I + + + + + K++ T F+YL+ LP P K
Sbjct: 853 ADSAWYKHKQLNESIIVSL-FQGQFKSTVQCLTCQKKSRTFEAFMYLS--LPLPSTSKCS 909
Query: 164 VLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFV 223
L++ I LT N KT + K+ EI LPP L++++KRF+ +
Sbjct: 910 -LKDCIKAFAKEEKLTDSNRFDCSNCKTQRV-ATKKIEIWKLPPILLVHLKRFSFEGRWR 967
Query: 224 EKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNG 283
+K V+FP++++D L+P V S Y+L V+N H G G
Sbjct: 968 QKLQAYVDFPLESLD----LSPYVIGPKSSKKYNLFG----------VSN--HYGGLDGG 1011
Query: 284 TYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
Y + + +W++ D V+DI + + AY+ Y
Sbjct: 1012 HYTAYCKNALKQRWFKFDDHDVSDISVSSVKTSAAYMLFY 1051
>gi|357453291|ref|XP_003596922.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355485970|gb|AES67173.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 871
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+ ++ LP L++++KRF + F K T+V+FPV N+D +T + Y T+Y
Sbjct: 750 KKLDLWRLPEILVIHLKRFQYSRFMKNKLETLVDFPVDNLDLSSYITHGNQKSYHYTLY- 808
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
++N H G G Y ++H G +WY+ D V I + I +
Sbjct: 809 ------------AISN--HFGSMGGGHYTAFVHHGG-DQWYDFDDSRVYPISKEKIKSSA 853
Query: 318 AYIQIY 323
AY+ Y
Sbjct: 854 AYVLFY 859
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 1 ALCHVTPLRDYFL----REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPH 56
L H L DYFL REIN G+ + FG+L+RKLW P S V+P
Sbjct: 288 CLTHTPKLVDYFLEDYSREINSDNPLGMNGE----IASAFGDLLRKLWAPG--ASPVAPR 341
Query: 57 EMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK 99
M ++ + QF Q D + L++ L+ LH LN K K
Sbjct: 342 -MFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCK 383
>gi|167526008|ref|XP_001747338.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774173|gb|EDQ87805.1| predicted protein [Monosiga brevicollis MX1]
Length = 1125
Score = 57.8 bits (138), Expect = 7e-06, Method: Composition-based stats.
Identities = 71/297 (23%), Positives = 122/297 (41%), Gaps = 44/297 (14%)
Query: 47 RNFKSHVSPHEMLQAVVLWSR---KQFQFTEQSDPIDFLSWFLNTLHRALNGT------K 97
R S P QA+V R K+F+ Q D +F+ + + L ++ T +
Sbjct: 256 RALSSSAGPSITPQAIVSKLRTIYKRFRLGRQEDAHEFMRFLIEALQKSAVSTVGQLDER 315
Query: 98 KKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPP 157
K +S+++ F G ++ + R L+ +Y E+ T PFL L+ ++
Sbjct: 316 SKTTSVIHGIFGGYLRSQVR---------------CLSCKY-ESNTYDPFLDLSLEIG-- 357
Query: 158 PLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFT 217
K + L+ + L + N + Y + LK+F LP L + +KRF+
Sbjct: 358 ---KCQTLDKALRHFFSPEKLLRENQYRCDGCRKYVDA-LKQFSCHHLPNVLTVQLKRFS 413
Query: 218 KNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHD 277
+ F K V +P + +D + P V +++M D T Y L A +VH
Sbjct: 414 FISMFGSKVGQFVQYP-EILD----MAPYVNKTQQASMTD------RGTRYRLYAVLVHA 462
Query: 278 GEP-SNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTA 333
G +G Y ++ + WY + D V+ Q + +AYI Y P P+A
Sbjct: 463 GHSLQSGHYYCYVRNSN-NIWYRMDDARVSTASQQEVMRQQAYILFYTRIANPRPSA 518
>gi|313228437|emb|CBY23588.1| unnamed protein product [Oikopleura dioica]
Length = 820
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 28/173 (16%)
Query: 172 VNLYTILTKFNNESEKEY----KTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNP 227
+NL+TI K E E+ Y K +++ F K +I LPP LIL++KRF N F +K
Sbjct: 663 LNLFTIEEKLR-EGEEWYCPHCKEHQQAF-KHMQIWKLPPVLILHLKRFHYNRIFRDKVC 720
Query: 228 TIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRV 287
+V+FP + +D L K Y+L+A H G G Y
Sbjct: 721 DMVHFPTRGLDMSPYLLGPGAGK---------------ARYNLLAVSNHMGRLGGGHYTA 765
Query: 288 HLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTT------PSPTAM 334
++ H W D V++ + AY+ +Y +R T P TAM
Sbjct: 766 NVLHTPTNNWLNFNDSFVSNATEDQSVSSSAYVLVY-VRDTEDWFPHPVSTAM 817
>gi|406606361|emb|CCH42352.1| putative ubiquitin carboxyl-terminal hydrolase 12 [Wickerhamomyces
ciferrii]
Length = 1327
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+ I S P L +++KRFT F +K +VNFP++ D ++ V +
Sbjct: 1056 KQISIWSTPDILTIHLKRFTSQRSFSDKISKVVNFPIEGFDVSPYISSPVNSN------- 1108
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
E T+YDL A H G S G Y + + +WY D HV+ + + E
Sbjct: 1109 ------EETIYDLFAVDNHWGGISGGHYTSKVKNFVDNQWYNYNDSHVSPTSVEDLISAE 1162
Query: 318 AYIQIYELRTT 328
AY+ Y R++
Sbjct: 1163 AYLLFYRRRSS 1173
>gi|328793899|ref|XP_394836.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Apis
mellifera]
Length = 1001
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 130/298 (43%), Gaps = 25/298 (8%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
+V+ ++++ LW + +KS +SPH++ AV + + QF+ EQ D +FL++ L+ +H
Sbjct: 715 VVEEVAQVIKALWRGQ-YKS-ISPHDLKIAVGQY-KLQFESYEQQDSHEFLTFLLDWMHN 771
Query: 92 ALNGTKKK--DSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLY 149
L K + +I K + +M + R I ++R + + + + T F
Sbjct: 772 DLKKNCKVPVEMTIAEKAWDKAMGSQ-RSIISDLFFGQLRSTITCSFCKQSSTTYETFNS 830
Query: 150 LTCDL--PPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPP 207
LT L D +L+ + Q + K E K+F+ L P
Sbjct: 831 LTMSLLHSNRCTLNDCILKFVSGQKVIGWKCPKCQTAREA---------TKKFDFVKLAP 881
Query: 208 YLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTM 267
+++++ RF ++ ++EK T V+FP+ DF L P + ST +++ S
Sbjct: 882 IIVIHLNRFAESGGWLEKRNTAVDFPL--TDFN--LKPYLVTDNNSTTISNIRSYSYSYS 937
Query: 268 YDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITL--TEAYIQIY 323
++N H G G Y + KWY+ D VT++ + T AY+ Y
Sbjct: 938 LYAMSN--HYGTMEGGHYTAFCKNAAQNKWYKYDDQTVTEVSVNQVRSQNTSAYLLFY 993
>gi|242042990|ref|XP_002459366.1| hypothetical protein SORBIDRAFT_02g003380 [Sorghum bicolor]
gi|241922743|gb|EER95887.1| hypothetical protein SORBIDRAFT_02g003380 [Sorghum bicolor]
Length = 867
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
Query: 197 LKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMY 256
+K+ ++ LP L++++KRF+ F K T V+FP ++D + Y
Sbjct: 752 MKKLDLWRLPEVLVIHLKRFSYTQFTRNKLETFVDFPTTDLDL--------------SSY 797
Query: 257 DLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLT 316
K+K S+ Y L A H G G Y +YH+ WY+ D +VT + I +
Sbjct: 798 IADKSKQPSSHYRLYAISNHYGNMGGGHYTASIYHEEGKGWYKFDDDYVTPMSEDSIKTS 857
Query: 317 EAYIQIY 323
AY+ Y
Sbjct: 858 AAYVLFY 864
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L H L DYFL + + P + L FGEL+R LW R + PH +
Sbjct: 261 CLAHTPKLVDYFLGDYANNINRTNPLGLNGELALAFGELLRSLWTDRK---PIPPHHFKE 317
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK 99
+ ++ QF Q D + L++ L+ LH LN K K
Sbjct: 318 KIACFA-PQFSGFNQHDSQELLAFLLDGLHEDLNQVKCK 355
>gi|149042015|gb|EDL95856.1| rCG58374 [Rattus norvegicus]
Length = 471
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 121/311 (38%), Gaps = 70/311 (22%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFL 82
R GDS+ LV+ F + + LW Q F+ +S + ++
Sbjct: 209 RSQGDSNVSLVEEFRKTL---------------------CALWQGSQTAFSPES--LFYV 245
Query: 83 SWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETE 142
W + R NG +S V T G + L+ +V + TE K
Sbjct: 246 VWKIMPNFR--NG-----ASTVVTTIFGGI-----------LQNEVNCLICGTESRKF-- 285
Query: 143 TESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KEYKTY-------KE 194
PFL L+ D+P K + P +L L F + E E + Y K+
Sbjct: 286 --DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQ 343
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYES 253
K+F I LP L L++KRF + K T V FP++ +D +L PE
Sbjct: 344 KSTKKFWIQKLPKALCLHLKRFHWTAYLRNKVDTYVQFPLRGLDMKCYLLEPE------- 396
Query: 254 TMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYEIQDLHVTDILPQM 312
+ +S +YDL A +VH G +G Y + H+ G+W+ D VT +
Sbjct: 397 ------NSGPDSCLYDLAAVVVHHGSGVGSGHYTAYAVHE--GRWFHFNDSTVTVTDEET 448
Query: 313 ITLTEAYIQIY 323
+ +AYI Y
Sbjct: 449 VGKAKAYILFY 459
>gi|145340853|ref|XP_001415532.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575755|gb|ABO93824.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 688
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 197 LKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMY 256
+K+ ++ +PP L++++KRF+ + + +K T+++FP+ +D + P +
Sbjct: 528 MKKLDLWRMPPILVMHLKRFSYSRTWRDKIDTLIDFPLNTLDMTPYVLPNASSG------ 581
Query: 257 DLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDI-LPQMITL 315
+ +YDL A + H G G Y + H G W+ D T + + +
Sbjct: 582 -------PAPIYDLYAVVNHFGGMGGGHYTAYTRHAEEGTWHLYDDSRCTAVDVGAALNN 634
Query: 316 TEAYIQIYELRTTPSPTAMSEG 337
+ AY+ Y+ R P AMS
Sbjct: 635 SAAYVLFYKRRDVPMRQAMSRA 656
>gi|313247032|emb|CBY35868.1| unnamed protein product [Oikopleura dioica]
Length = 816
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 28/173 (16%)
Query: 172 VNLYTILTKFNNESEKEY----KTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNP 227
+NL+TI K E E+ Y K +++ F K +I LPP LIL++KRF N F +K
Sbjct: 659 LNLFTIEEKLR-EGEEWYCPHCKEHQQAF-KHMQIWKLPPVLILHLKRFHYNRIFRDKVC 716
Query: 228 TIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRV 287
+V+FP + +D L K Y+L+A H G G Y
Sbjct: 717 DMVHFPTRGLDMSPYLLGPGAGK---------------ARYNLLAVSNHMGRLGGGHYTA 761
Query: 288 HLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTT------PSPTAM 334
++ H W D V++ + AY+ +Y +R T P TAM
Sbjct: 762 NVLHTPTNNWLNFNDSFVSNATEDQSVSSSAYVLVY-VRDTEDWFPHPVSTAM 813
>gi|291403016|ref|XP_002717774.1| PREDICTED: Putative ubiquitin carboxyl-terminal hydrolase 50-like
[Oryctolagus cuniculus]
Length = 373
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 128/336 (38%), Gaps = 44/336 (13%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L ++PL +YFL +++ D + F LM +W VSP E+ +
Sbjct: 61 CLGSISPLVEYFLSGKYITALQKDCSD----VATAFAYLMTDMW--LGDSDCVSP-EIFR 113
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+ + F Q D +FL + LN LH AL ++ S Y+ GS + RK
Sbjct: 114 SALGNLYPAFMKKTQQDAQEFLIYVLNELHEALKKYHRRRS---YEK--GSTQRCCRKAI 168
Query: 121 PVE-------LEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK---DEVLENIIP 170
E E ++ ++ + T F L+ LP P ++ + L+
Sbjct: 169 ANETSIITQLFEGQLNYGIICLKCENCTYRNEVFTVLS--LPIPSEYECSLQDCLQCFFQ 226
Query: 171 QVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIV 230
Q L +NN+ + K+ R I+ P +I ++KRF K T +
Sbjct: 227 QDTL-----TWNNQIHCSFCETKQETAVRASISKAPKIIIFHLKRFDIQGTVKRKLRTDI 281
Query: 231 NFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLY 290
++P+ N+D + P + + Y+L A + H G+ G Y
Sbjct: 282 HYPLTNLDLTPYICPVFR---------------KHPKYNLCAVVNHFGDLDGGHYTAFCK 326
Query: 291 HKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
+ WY D V++I + + AY+ Y +
Sbjct: 327 NSVTQAWYSFDDTRVSEIPNTSVQTSTAYLLFYSCQ 362
>gi|356543638|ref|XP_003540267.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Glycine
max]
Length = 874
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 16/126 (12%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+ ++ LP L++++KRF + + K T V+FPV N+D +T Y T+Y
Sbjct: 757 KKLDLWRLPEILVIHLKRFQYSRYLKNKLETYVDFPVDNLDLSAYITYGNDESYHYTLY- 815
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
V+N H G G Y + H+G +WY+ D HV I + I +
Sbjct: 816 ------------AVSN--HYGSMGGGHYTAFV-HRGGDQWYDFDDSHVNPISKEKIKSSA 860
Query: 318 AYIQIY 323
AY+ Y
Sbjct: 861 AYVLFY 866
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 75/171 (43%), Gaps = 24/171 (14%)
Query: 1 ALCHVTPLRDYFL----REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPH 56
L H L DYFL REIN+ P G + + + FG+L+RKLW P S VSP
Sbjct: 296 CLAHTPKLVDYFLEDYIREINH---DNPLGMNGEIALA-FGDLLRKLWAPG--ASPVSPR 349
Query: 57 EMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALN------------GTKKKDSSIV 104
+ ++ + QF Q D + L++ L+ LH LN G ++D +
Sbjct: 350 -IFKSKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKCKPYIEVKDGDGRRDEEVA 408
Query: 105 YKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLP 155
+ + + I V + + + L+ K + T PF+YL+ LP
Sbjct: 409 DEYWHNHLARNDSVIVDV-CQGQYKSTLVCPVCRKVSVTFDPFMYLSLPLP 458
>gi|354471265|ref|XP_003497863.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Cricetulus
griseus]
Length = 1079
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 144/356 (40%), Gaps = 76/356 (21%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 755 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 808
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT------------------- 96
+ + + QF + Q D + L + ++ LH LN
Sbjct: 809 KD-FKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKA 867
Query: 97 --------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFL 148
K+ + SI+ F G K + LT +K++ T F+
Sbjct: 868 AEHAWQKHKQLNESIIVALFQGQFKSTVQ---------------CLTC-HKKSRTFEAFM 911
Query: 149 YLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPY 208
YL+ LP K L++ + + LT NN + + + LK+ EI LPP
Sbjct: 912 YLS--LPLASTSKC-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPV 967
Query: 209 LILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTM 267
L++++KRF+ + + +K T V+FP++N+D ++ P+ K
Sbjct: 968 LLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKSSLK----------------K 1011
Query: 268 YDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
Y+L + H G G Y + + +W++ D V+DI + + AYI Y
Sbjct: 1012 YNLFSVSNHYGGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1067
>gi|195583324|ref|XP_002081472.1| GD11032 [Drosophila simulans]
gi|194193481|gb|EDX07057.1| GD11032 [Drosophila simulans]
Length = 1033
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 170 PQVNLYTILTKFNNESE----KEYKTYKENFL----KRFEITSLPPYLILYVKRFTKNTF 221
P V LY + F + E Y + N L K + +LP L +++KRF +
Sbjct: 391 PSVTLYDCMASFFSADELKGDNMYSCERCNKLRTGIKYSRVLTLPEVLCIHLKRFRNDLS 450
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
+ K + V FP++ D + + K+ E +Y+L + I H G
Sbjct: 451 YSSKISSDVYFPLEGFDMRPYIHKDCKS--------------EVAIYNLSSVICHHGTVG 496
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + GKWYE D VT++ +++ +AY+ Y
Sbjct: 497 GGHYTCFARNALNGKWYEFDDQFVTEVSSEVVQSCQAYVLFY 538
>gi|389586106|dbj|GAB68835.1| ubiquitin carboxyl-terminal hydrolase, partial [Plasmodium
cynomolgi strain B]
Length = 287
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
Query: 2 LCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQA 61
+C + PLR+YFL N + + ++ EL++K++NPRNFK VSPHE LQ
Sbjct: 224 VCSIIPLRNYFLIFQNKKYMTKN-------IISSLSELIKKIFNPRNFKGVVSPHEFLQT 276
Query: 62 VVLWSRKQFQ 71
V + S+K F+
Sbjct: 277 VGIESKKNFK 286
>gi|344248888|gb|EGW04992.1| Ubiquitin carboxyl-terminal hydrolase 8 [Cricetulus griseus]
Length = 1075
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 144/356 (40%), Gaps = 76/356 (21%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 751 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 804
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT------------------- 96
+ + + QF + Q D + L + ++ LH LN
Sbjct: 805 KD-FKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNDHLDDFKA 863
Query: 97 --------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFL 148
K+ + SI+ F G K + LT +K++ T F+
Sbjct: 864 AEHAWQKHKQLNESIIVALFQGQFKSTVQ---------------CLTC-HKKSRTFEAFM 907
Query: 149 YLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPY 208
YL+ LP K L++ + + LT NN + + + LK+ EI LPP
Sbjct: 908 YLS--LPLASTSKC-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPV 963
Query: 209 LILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTM 267
L++++KRF+ + + +K T V+FP++N+D ++ P+ K
Sbjct: 964 LLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKSSLK----------------K 1007
Query: 268 YDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
Y+L + H G G Y + + +W++ D V+DI + + AYI Y
Sbjct: 1008 YNLFSVSNHYGGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1063
>gi|221481696|gb|EEE20072.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
GT1]
Length = 1171
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 198 KRFEITSLPPYLILYVKRFTK-NTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMY 256
K+ ++ +P LIL++KRF F K T V FP K D+ D +TP + + M+
Sbjct: 1005 KKLDLWKMPKILILHLKRFHNIGRFTRSKIGTKVTFPYKAGDYLD-MTPYILPESLEMMH 1063
Query: 257 DLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLT 316
K + + +Y+LVA VH GE G Y Y K G+WY+ D V + +
Sbjct: 1064 --AKDQGLAPLYELVAVNVHSGELGGGHY--FAYAKLRGRWYDFNDSWVQPVSEDSCHSS 1119
Query: 317 EAYIQIYELRTTP----SPTAMSEG 337
+AY+ Y L+ S T+M++G
Sbjct: 1120 DAYMLFYRLKQDDSEWRSETSMNDG 1144
Score = 40.8 bits (94), Expect = 0.92, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 29/183 (15%)
Query: 2 LCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPH 56
L V PL YFL +IN V G L + + +R +W +S ++P
Sbjct: 373 LSKVLPLSYYFLSGKFVADINEENVMGTQGR----LARAYHATLRDMW--FGGESSLAPR 426
Query: 57 EMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK--------------DSS 102
+ L+A V R++F Q D + +++ L+ LH LN KKK D+
Sbjct: 427 D-LKAAVGRVREEFLGYNQQDSQELIAFLLDGLHEDLNRIKKKPYYESKIEGGPEKPDAQ 485
Query: 103 IVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKD 162
+ ++ ++ I + + + R RL K + T PF+YL+ LP PP ++
Sbjct: 486 VAELSWQRHKEINDSVIVDL-FQGQYRSRLECPACRKVSVTFDPFMYLS--LPVPPEWRH 542
Query: 163 EVL 165
+V+
Sbjct: 543 QVV 545
>gi|224072837|ref|XP_002303905.1| predicted protein [Populus trichocarpa]
gi|222841337|gb|EEE78884.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 116/274 (42%), Gaps = 48/274 (17%)
Query: 75 QSDPIDFLSWFLNTLHRAL-------NGTKKKDSSIVYKT------FLG----SMKVKTR 117
Q D +FLS+ ++ +H L +GT +S+V T +G S +T+
Sbjct: 44 QEDAQEFLSFIMHQMHDELLKLEGQSSGTNGFKTSVVSSTEEDEWETVGPKNKSAVTRTQ 103
Query: 118 KIPPVELEEKVRQRL---LLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNL 174
P EL + +L + K + T PFL L D+ EV+ I ++L
Sbjct: 104 SFIPSELSDIFGGQLRSVVKARGNKASATVQPFLLLHLDI------HLEVVRTIEDALHL 157
Query: 175 YTILTKFNNESEKEYKTYKENFL---KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVN 231
++ N E + K + K +I +L +IL++ RF+ + K V+
Sbjct: 158 FS--APENLEGYRTSAIGKSGVVTAKKSVKIQTLSKIMILHLMRFSYGSQGSAKLLKPVH 215
Query: 232 FPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDG-EPSNGTYRVHLY 290
FP+ +F IL+ E+ LV ES Y+LVA + H G EPS G Y +
Sbjct: 216 FPL---EF--ILSREL----------LVSPSTESRKYELVATVTHHGREPSKGHYTADVR 260
Query: 291 HKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
H G+W D VT I + +AY+ Y+
Sbjct: 261 HSN-GQWLRFDDASVTAITTSKVLHDQAYVLFYK 293
>gi|431897014|gb|ELK06278.1| Ubiquitin carboxyl-terminal hydrolase 33 [Pteropus alecto]
Length = 931
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 587 NGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 643
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 644 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNHWYEFDDQSVTEVSESTVQ 692
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 693 NAEAYVLFY 701
>gi|307204808|gb|EFN83366.1| Ubiquitin carboxyl-terminal hydrolase 3 [Harpegnathos saltator]
Length = 550
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 109/274 (39%), Gaps = 48/274 (17%)
Query: 69 QFQFTEQSDPIDFLSWFLNTLHRAL-----------NGTKKKDSSIVYKTFLGSMKVKTR 117
+F+ +Q D +FL++ L+ LH L G + K SIV F G++
Sbjct: 295 RFRGYQQQDAHEFLTYMLDRLHTELLQLLPRLGHEPPGLRGK-QSIVTAVFGGTL----- 348
Query: 118 KIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTI 177
+ + + R +++T PF L+ D+P + + E + Y++
Sbjct: 349 ----LSVVHCMNCR-------TDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLT--YSL 395
Query: 178 LTKFNNESEKEYKTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIV 230
F E + + Y K+ KRF I LP L L++KRF + K T V
Sbjct: 396 TRFFKVEELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQV 455
Query: 231 NFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSN-GTYRVHL 289
+FP++++D + A M S +YDL A IVH G + G Y
Sbjct: 456 DFPMESLD--------MSAFTVRGMTGTRLGAQNSHLYDLAAVIVHHGSGAGTGHYTAFA 507
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
H G+W+ D V + + + YI Y
Sbjct: 508 VHD--GQWFHFNDSSVRPASTESVAKCKPYILFY 539
>gi|296089361|emb|CBI39133.3| unnamed protein product [Vitis vinifera]
Length = 1092
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 110 GSMKVKTRKIPPVELEEKVRQRL--LLTEEYKETET-ESPFLYLTCDLPPPPLFKDEVLE 166
GS K + +EL ++ +RL L+ Y+ E ++ L L ++ P LF E
Sbjct: 878 GSTKGSNINMNKLELISQLPRRLNVLVHWPYRMIEKYDTCLLSLLPEICKPELFAKRPQE 937
Query: 167 NIIPQVNLYTILTKF------------NNESEKEYKTYKENFLKRFEITSLPPYLILYVK 214
+ V+LY L F N K+++ K+ ++ LP L++++K
Sbjct: 938 S----VSLYKCLEAFLKEEPLGPEDMWNCPCCKKHRQAS----KKLDLWRLPEILVIHLK 989
Query: 215 RFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANI 274
RF+ + F+ K T ++FP+ ++D + Y K + S Y L A
Sbjct: 990 RFSYSRFWKNKLETFIDFPIDDLDL--------------STYIAQKNSHLSNHYKLYAIC 1035
Query: 275 VHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYE 324
H G +G Y + H G +WYE D V+ I I + AY+ Y+
Sbjct: 1036 NHYGGMGSGHYTAFVRHGG-NQWYEFDDSRVSPIGEDEIKTSAAYVLFYQ 1084
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 1 ALCHVTPLRDYFL----REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPH 56
L H L DYFL +EINY + P G + L + FG+L+RKLW P + V+P
Sbjct: 123 CLVHTPKLVDYFLGDYRKEINY---ENPLGMNGELALA-FGDLLRKLWAPG--ATPVAPR 176
Query: 57 EMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK 99
M + + QF Q D +FL++ L+ LH LN K K
Sbjct: 177 -MFKLKLSSFAPQFSGYNQHDSQEFLAFLLDGLHEDLNRVKCK 218
>gi|93279989|pdb|2GFO|A Chain A, Structure Of The Catalytic Domain Of Human Ubiquitin
Carboxyl-terminal Hydrolase 8
Length = 396
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 140/343 (40%), Gaps = 50/343 (14%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG + + LW + ++SP
Sbjct: 80 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIXKALWTGQ--YRYISP 133
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYK----TFLGS 111
+ + + QF Q D + L + + LH LN K D+ YK L
Sbjct: 134 KD-FKITIGKINDQFAGYSQQDSQELLLFLXDGLHEDLN---KADNRKRYKEENNDHLDD 189
Query: 112 MKVK----------TRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK 161
K I + + + + +K++ T F YL+ LP K
Sbjct: 190 FKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFXYLS--LPLASTSK 247
Query: 162 DEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTF 221
L++ + + LT NN + + + LK+ EI LPP L++++KRF+ +
Sbjct: 248 -CTLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGR 305
Query: 222 FVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP 280
+ +K T V+FP++N+D ++ P+ K Y+L + H G
Sbjct: 306 WKQKLQTSVDFPLENLDLSQYVIGPKNNLK----------------KYNLFSVSNHYGGL 349
Query: 281 SNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + +W++ D V+DI + + AYI Y
Sbjct: 350 DGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 392
>gi|24643795|ref|NP_728456.1| CG14619, isoform B [Drosophila melanogaster]
gi|22832694|gb|AAN09567.1| CG14619, isoform B [Drosophila melanogaster]
Length = 337
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 126/303 (41%), Gaps = 33/303 (10%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
++ F +L++++W N + V+P E+ +A R + +Q D +FL +FL++LH
Sbjct: 56 ILHEFAKLIQEMWTA-NVHT-VTPMELKRAFSTKHRMYSDYNQQ-DAQEFLRFFLDSLHS 112
Query: 92 ALNGTKKKDSSIVYKTFLGSMKVK------TRKIPPVELE---EKVRQRLLLTEEYKETE 142
ALN K ++ + + K TR + + +++ L T +
Sbjct: 113 ALNSGVKGETLNIDDNLSDNKKADLTWEWYTRHENSLVRDLFVGQLKSTLKCTTCGNTSV 172
Query: 143 TESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEI 202
T PF L+ LP K E ++ + +L + + KT ++ K F I
Sbjct: 173 TFDPFWDLSVPLPSSSRCKLEACLDLFIREE---VLDGDEMPTCAKCKTRRK-CTKSFTI 228
Query: 203 TSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAK 262
P YL++++KRF++ + K IV FP + + A S ++
Sbjct: 229 QRFPKYLVIHLKRFSETRW--SKLSNIVEFPTSDSELN---MGSYGANSNSNVH------ 277
Query: 263 YESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQ-MITLTEAYIQ 321
Y L A H G + G Y H KW+E D V+D L + + + AYI
Sbjct: 278 -----YSLYAISNHMGSTAGGHYVALCKHPVSRKWHEFNDNIVSDALSENHLVSSSAYIL 332
Query: 322 IYE 324
YE
Sbjct: 333 FYE 335
>gi|21429716|gb|AAM50536.1| AT06247p [Drosophila melanogaster]
Length = 990
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 170 PQVNLYTILTKFNNESE----KEYKTYKENFL----KRFEITSLPPYLILYVKRFTKNTF 221
P V LY + F + E Y + N L K + +LP L +++KRF +
Sbjct: 406 PSVTLYDCMASFFSADELKGDNMYSCERCNKLRTGIKYSRVLTLPEVLCIHLKRFRNDLS 465
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
+ K + V FP++ D + + K+ E +Y+L + I H G
Sbjct: 466 YSSKISSDVYFPLEGFDMRPYIHKDCKS--------------EVAIYNLSSVICHHGTVG 511
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + GKWYE D VT++ +++ +AY+ Y
Sbjct: 512 GGHYTCFARNALNGKWYEFDDQFVTEVSSELVQSCQAYVLFY 553
>gi|397515262|ref|XP_003827873.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Pan paniscus]
Length = 899
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 144/342 (42%), Gaps = 48/342 (14%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 575 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 628
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYK----TFLGS 111
+ + + QF Q D + L + ++ LH LN K D+ YK L
Sbjct: 629 KD-FKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLN---KADNRKRYKEENNDHLDD 684
Query: 112 MKVK----------TRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK 161
K I + + + + +K++ T F+YL+ LP K
Sbjct: 685 FKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLS--LPLASTSK 742
Query: 162 DEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTF 221
L++ + + LT NN + + + LK+ EI LPP L++++KRF+ +
Sbjct: 743 C-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGR 800
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
+ +K T V+FP++N+D ++Y ++ K Y+L + H G
Sbjct: 801 WKQKLQTSVDFPLENLDL---------SQY------VIGPKNNLKKYNLFSVSNHYGGLD 845
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + +W++ D V+DI + + AYI Y
Sbjct: 846 GGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 887
>gi|348545019|ref|XP_003459978.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Oreochromis niloticus]
Length = 394
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYD 257
K+F I P L+L++KRF++ K T VNFP+K++D + + E+++
Sbjct: 278 KKFTIQKFPKILVLHLKRFSE-ARRTSKLSTFVNFPMKDLDLREFAS-------ENSI-- 327
Query: 258 LVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTE 317
+ +Y+L A H G G Y + + G+WY D VT + + ++
Sbjct: 328 -------NAVYNLYAVSNHSGTTMGGHYTAYCRNPSSGEWYTFNDSRVTPMSSSQVRSSD 380
Query: 318 AYIQIYELRTT 328
AY+ YEL +
Sbjct: 381 AYVLFYELACS 391
>gi|5689531|dbj|BAA83049.1| KIAA1097 protein [Homo sapiens]
Length = 980
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ + P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 636 NGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 692
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 693 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 741
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 742 NAEAYVLFY 750
>gi|42516561|ref|NP_963920.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 3 [Homo sapiens]
gi|16741735|gb|AAH16663.1| Ubiquitin specific peptidase 33 [Homo sapiens]
gi|119626773|gb|EAX06368.1| ubiquitin specific peptidase 33, isoform CRA_b [Homo sapiens]
gi|123981168|gb|ABM82413.1| ubiquitin specific peptidase 33 [synthetic construct]
gi|123995993|gb|ABM85598.1| ubiquitin specific peptidase 33 [synthetic construct]
Length = 828
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ + P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 590 NGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 646
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 647 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 695
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 696 NAEAYVLFY 704
>gi|110741704|dbj|BAE98798.1| ubiquitin-specific protease 8 [Arabidopsis thaliana]
Length = 582
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 15/128 (11%)
Query: 197 LKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMY 256
+K+ ++ LP L++++KRF+ + F K V+FP+ N+D L+ + K T Y
Sbjct: 466 IKKLDLWRLPEILVIHLKRFSYSRFMKNKLEAYVDFPLDNLD----LSSYISYKNGQTTY 521
Query: 257 DLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLT 316
Y L A H G G Y +++H G +WY+ D HV I + I +
Sbjct: 522 ----------RYMLYAISNHYGSMGGGHYTAYVHHGG-DRWYDFDDSHVHQISQEKIKTS 570
Query: 317 EAYIQIYE 324
AY+ Y+
Sbjct: 571 AAYVLFYK 578
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 1 ALCHVTPLRDYFL----REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPH 56
L H L D+FL +EIN + P G + + FG+L+R LW P S V+P
Sbjct: 7 CLAHTPKLVDFFLGEYSKEIN---LDNPLGMKGEIALA-FGDLLRSLWAPG--ASTVAPR 60
Query: 57 EMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK 99
+A + QF Q D + L++ L+ LH LN K K
Sbjct: 61 -TFKAKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKNK 102
>gi|401406492|ref|XP_003882695.1| Ubiquitin carboxyl-terminal hydrolase, related [Neospora caninum
Liverpool]
gi|325117111|emb|CBZ52663.1| Ubiquitin carboxyl-terminal hydrolase, related [Neospora caninum
Liverpool]
Length = 1108
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVE-KNPTIVNFPVKNVDFGDILTPEVKAKYESTMY 256
K+ ++ +P LIL++KRF + F K T V FP K D+ D +TP + + M+
Sbjct: 980 KKLDLWKMPKILILHLKRFHNISRFTRSKIGTKVTFPYKAGDYLD-MTPYILPESLEMMH 1038
Query: 257 DLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLT 316
K + + +Y+LVA VH GE G Y Y K G+WY+ D V + +
Sbjct: 1039 --AKDQGFAPLYELVAVNVHSGELGGGHY--FAYAKLRGRWYDFNDSWVQSVSEDSCHSS 1094
Query: 317 EAYIQIYELRTTPS 330
+AY+ Y L+ S
Sbjct: 1095 DAYMLFYRLKQDES 1108
Score = 39.3 bits (90), Expect = 2.9, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 29/183 (15%)
Query: 2 LCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPH 56
L V PL YFL +IN V G L + + +R +W + S ++P
Sbjct: 347 LSKVLPLSYYFLSGRFVADINEENVMGTQGR----LARAYHATLRDMWFGGD--SPLAPR 400
Query: 57 EMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK--------------DSS 102
+ L+A V R++F Q D + +++ L+ LH LN KKK D+
Sbjct: 401 D-LKAAVGRVREEFLGYNQQDSQELIAFLLDGLHEDLNRIKKKPYYESKIEGGPEKSDAE 459
Query: 103 IVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKD 162
+ ++ ++ I + + + R RL K + T PF+YL+ LP PP ++
Sbjct: 460 VAELSWQRHKEINDSVIVDL-FQGQYRSRLECPACGKISVTFDPFMYLS--LPVPPEWRH 516
Query: 163 EVL 165
+V+
Sbjct: 517 QVV 519
>gi|42516565|ref|NP_963918.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Homo sapiens]
gi|119626772|gb|EAX06367.1| ubiquitin specific peptidase 33, isoform CRA_a [Homo sapiens]
Length = 911
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ + P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 567 NGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 623
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 624 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 672
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 673 NAEAYVLFY 681
>gi|395506252|ref|XP_003757449.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 20 [Sarcophilus harrisii]
Length = 908
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ LP L +++KRF + K + V+F ++ +D L E ++
Sbjct: 562 NGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFSLEGLDLQPFLAKECVSQI--- 618
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T YDL++ I H G +G Y + + G+WYE D +VT++ ++
Sbjct: 619 -----------TTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 667
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 668 NAEAYVLFY 676
>gi|354477262|ref|XP_003500841.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Cricetulus
griseus]
Length = 1203
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 17/164 (10%)
Query: 172 VNLYTILTKFNNESEKEYKTYKEN--FLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTI 229
+ L+T K E KE+ K+ ++ SLPP L++++KRF+ + + +K T+
Sbjct: 1014 IELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSYSRYMRDKLDTL 1073
Query: 230 VNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHL 289
V+FP+ ++D + L+ +Y+L+A H G G Y
Sbjct: 1074 VDFPINDLDMSEF---------------LINPNAGPCLYNLIAVSNHYGGMGGGHYTAFA 1118
Query: 290 YHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPTA 333
+K GKWY D V+ I AY+ Y+ + T S T
Sbjct: 1119 KNKDDGKWYYFDDSSVSTASEDQIVSKAAYVLFYQRQDTFSGTG 1162
Score = 37.7 bits (86), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 25/172 (14%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
L + PL +YFL E+N+ G+ + + + EL++++W+ + S+V+P
Sbjct: 528 CLSNTPPLTEYFLNDKYQEELNFDNPLGMRGE----IAKSYAELIKQMWSGK--FSYVTP 581
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK------------DSSI 103
V ++ QF +Q D + L++ L+ LH LN +KK D +
Sbjct: 582 RAFKTQVGRFA-PQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVV 640
Query: 104 VYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLP 155
+ + +K I + + L+ E K + T PF YLT LP
Sbjct: 641 AEEAWENHLKRNDSIIVDI-FHGLFKSTLVCPECAKISVTFDPFCYLTLPLP 691
>gi|148696217|gb|EDL28164.1| ubiquitin specific peptidase 8, isoform CRA_b [Mus musculus]
Length = 1119
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 143/356 (40%), Gaps = 76/356 (21%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 795 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 848
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT------------------- 96
+ + + QF + Q D + L + ++ LH LN
Sbjct: 849 KD-FKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNEHLDDLQA 907
Query: 97 --------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFL 148
K+ + SI+ F G K + + R+R + T F+
Sbjct: 908 AEHAWQKHKQLNESIIVALFQGQFKSTVQCL-------TCRRR---------SRTFEAFM 951
Query: 149 YLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPY 208
YL+ LP K L++ + + LT NN + + + LK+ EI LPP
Sbjct: 952 YLS--LPLASTSKC-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPV 1007
Query: 209 LILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTM 267
L++++KRF+ + + +K T V+FP++N+D ++ P+ K
Sbjct: 1008 LLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLK----------------K 1051
Query: 268 YDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
Y+L + H G G Y + + +W++ D V+DI + + AYI Y
Sbjct: 1052 YNLFSVSNHYGGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1107
>gi|403339921|gb|EJY69221.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1228
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 29/177 (16%)
Query: 149 YLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNE-----SEKEYKTY---KENFLKRF 200
++ D P FK + I ++LY + F+ E ++K Y ++ +N LK+
Sbjct: 1044 FVNVDSAPQQQFK-KYPTAIKDAISLYDCINWFSQEELLTGNDKWYCSHCKNHQNALKKM 1102
Query: 201 EITSLPPYLILYVKRFT-KNTFFVEKNPTIVNFPVKNVDFGD--------ILTPEVKAKY 251
EI P YLI+++KRF+ + + K ++ FP++++D + + P+ K+K
Sbjct: 1103 EIFKAPEYLIIHLKRFSHQRAYSARKIEDVIEFPIEDLDLNEHCLGNKLLLSNPKDKSKA 1162
Query: 252 ESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDI 308
+ ++ YDL A H G G Y + KWYE D HVT+I
Sbjct: 1163 QKSL-----------KYDLYAVSNHYGSLHGGHYTAFAQNPITSKWYEFDDSHVTEI 1208
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 1 ALCHVTPLRDYFLREINYARVKR--PPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEM 58
L + PL Y + + + + R P G L + F EL+ +L+ + ++HV+P ++
Sbjct: 611 CLSNTEPLAKYLIFDCYTSHINRNNPLGTQGKLAI-AFSELLYELYVGQ--ENHVAPWDV 667
Query: 59 LQAVVLWSRKQFQFT--EQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTF 108
+ SR+ QF+ Q D + LS+ L TLH LN KK I YK F
Sbjct: 668 KNII---SRRAVQFSGFAQHDSQEMLSFLLETLHEDLNDIVKK-PYIEYKDF 715
>gi|5410230|gb|AAD42992.1|AF073344_1 ubiquitin-specific protease 3 [Homo sapiens]
Length = 521
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 132/324 (40%), Gaps = 46/324 (14%)
Query: 23 RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWS-RKQFQFTEQSDPIDF 81
R GD++ LV+ F + + LW + ++ SP + V+W F+ +Q D +F
Sbjct: 209 RSQGDNNVSLVEEFRKTLCALW--QGSQTAFSPESLF--YVVWKIMPNFRGYQQQDAHEF 264
Query: 82 ---------LSWF--LNTLHRALNGTKKKDSSI-VYKTFLGSMKVKTRKIPPVELEEKVR 129
L F ++T+ A ++ + V K + I L+ +V
Sbjct: 265 NALPFGPPTLGNFRAVSTVFPAQQFCRRILLCLQVNKCCINGASTVVTAIFGGILQNEVN 324
Query: 130 QRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESE-KE 188
+ TE K PFL L+ D+P K + P +L L F + E E
Sbjct: 325 CLICGTESRKF----DPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDE 380
Query: 189 YKTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFG- 240
+ Y K+ K+F I LP L L++KRF + K T V FP++ +D
Sbjct: 381 TELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKW 440
Query: 241 DILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP-SNGTYRVHLYHKGIGKWYE 299
+L PE + ES +YDL A +VH G +G Y + H+ G+W+
Sbjct: 441 YLLEPE-------------NSGPESCLYDLAAVVVHHGSGVGSGHYTAYATHE--GRWFH 485
Query: 300 IQDLHVTDILPQMITLTEAYIQIY 323
D VT + + +AYI Y
Sbjct: 486 FNDSTVTLTDEETVVKAKAYILFY 509
>gi|119626775|gb|EAX06370.1| ubiquitin specific peptidase 33, isoform CRA_d [Homo sapiens]
Length = 911
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ + P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 567 NGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 623
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 624 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 672
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 673 NAEAYVLFY 681
>gi|156365847|ref|XP_001626854.1| predicted protein [Nematostella vectensis]
gi|156213745|gb|EDO34754.1| predicted protein [Nematostella vectensis]
Length = 632
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 64/156 (41%), Gaps = 20/156 (12%)
Query: 190 KTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNP-------TIVNFPVKNVDFGDI 242
K ++ +K+ + SLP LI+++KRF + F + P T+V FPV ++D
Sbjct: 457 KKLQQGTVKKLSLWSLPEVLIIHLKRFRQLLFLQLQCPSGRTKLHTLVEFPVNDLDMSPH 516
Query: 243 LTPEVKA------------KYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLY 290
L P K + T A E +YDL A H G S G Y H
Sbjct: 517 LEPRHKIIPDTHSVLTNWPHWRRTRRSSGVAG-EDNLYDLYAVCNHLGNMSGGHYTAHCR 575
Query: 291 HKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
+ G+WY D V + +T AY+ Y R
Sbjct: 576 NPTDGQWYLYDDTRVEQVPVNQVTTQAAYLLFYARR 611
>gi|18698435|gb|AAL78315.1|AF383173_1 pVHL-interacting deubiquitinating enzyme 1 type II [Homo sapiens]
gi|168278803|dbj|BAG11281.1| ubiquitin carboxyl-terminal hydrolase 33 [synthetic construct]
Length = 911
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ + P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 567 NGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 623
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 624 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 672
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 673 NAEAYVLFY 681
>gi|148696216|gb|EDL28163.1| ubiquitin specific peptidase 8, isoform CRA_a [Mus musculus]
Length = 1108
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 143/356 (40%), Gaps = 76/356 (21%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 784 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 837
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT------------------- 96
+ + + QF + Q D + L + ++ LH LN
Sbjct: 838 KD-FKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNEHLDDLQA 896
Query: 97 --------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFL 148
K+ + SI+ F G K + + R+R + T F+
Sbjct: 897 AEHAWQKHKQLNESIIVALFQGQFKSTVQCL-------TCRRR---------SRTFEAFM 940
Query: 149 YLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPY 208
YL+ LP K L++ + + LT NN + + + LK+ EI LPP
Sbjct: 941 YLS--LPLASTSKC-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPV 996
Query: 209 LILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTM 267
L++++KRF+ + + +K T V+FP++N+D ++ P+ K
Sbjct: 997 LLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLK----------------K 1040
Query: 268 YDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
Y+L + H G G Y + + +W++ D V+DI + + AYI Y
Sbjct: 1041 YNLFSVSNHYGGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1096
>gi|18698433|gb|AAL78314.1|AF383172_1 pVHL-interacting deubiquitinating enzyme 1 type I [Homo sapiens]
Length = 942
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ + P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 598 NGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 654
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 655 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 703
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 704 NAEAYVLFY 712
>gi|42516567|ref|NP_055832.3| ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Homo sapiens]
gi|116242838|sp|Q8TEY7.2|UBP33_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33; AltName:
Full=VHL-interacting deubiquitinating enzyme 1;
Short=hVDU1
gi|119626774|gb|EAX06369.1| ubiquitin specific peptidase 33, isoform CRA_c [Homo sapiens]
Length = 942
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ + P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 598 NGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 654
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 655 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 703
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 704 NAEAYVLFY 712
>gi|392589983|gb|EIW79313.1| cysteine proteinase [Coniophora puteana RWD-64-598 SS2]
Length = 1272
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 7/137 (5%)
Query: 198 KRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKA--KYESTM 255
K+F + + P L++++KRF+ + +K +V+FP++ +D D++ E KA + +
Sbjct: 964 KKFTLWNAPDILVVHLKRFSNSRAMRDKIDALVDFPIEALDLTDMVG-ERKATRRLAESG 1022
Query: 256 YDLVKAKYEST----MYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQ 311
D+ E+ +YDL A H G G YR + +H G KWY D +VT+ +
Sbjct: 1023 VDVQTLGLENDDDPLLYDLFAVDEHLGGLGGGHYRAYAHHYGTDKWYHFDDSYVTESTAE 1082
Query: 312 MITLTEAYIQIYELRTT 328
AY+ Y+ R++
Sbjct: 1083 QSVNANAYLLFYQRRSS 1099
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 18/171 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVK-RPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L H L DYFL + + + P + + FG L+ K+W + S SP E
Sbjct: 421 CLAHNKELMDYFLFGVYHQELNPDNPLGMQGAIAEAFGALVDKIWATNSTMSSYSPREFK 480
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK--------DSS-------IV 104
A+ ++ QF +Q D + +++ L+ LH LN KK D +
Sbjct: 481 MALQRFA-PQFSGYQQHDSQELVAFLLDGLHEDLNRVLKKPYVEKPDWDGGGDVELVQLA 539
Query: 105 YKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLP 155
K++ G K++ + + + + L+ E K + T PF+YLT LP
Sbjct: 540 QKSWDG-YKLRNDSVIVDLFQGQYQSTLVCPECQKISITFDPFMYLTLPLP 589
>gi|22026877|ref|NP_610943.2| CG8494 [Drosophila melanogaster]
gi|21392026|gb|AAM48367.1| LD43649p [Drosophila melanogaster]
gi|21645420|gb|AAF58273.2| CG8494 [Drosophila melanogaster]
Length = 975
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 170 PQVNLYTILTKFNNESE----KEYKTYKENFL----KRFEITSLPPYLILYVKRFTKNTF 221
P V LY + F + E Y + N L K + +LP L +++KRF +
Sbjct: 391 PSVTLYDCMASFFSADELKGDNMYSCERCNKLRTGIKYSRVLTLPEVLCIHLKRFRNDLS 450
Query: 222 FVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPS 281
+ K + V FP++ D + + K+ E +Y+L + I H G
Sbjct: 451 YSSKISSDVYFPLEGFDMRPYIHKDCKS--------------EVAIYNLSSVICHHGTVG 496
Query: 282 NGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + GKWYE D VT++ +++ +AY+ Y
Sbjct: 497 GGHYTCFARNTLNGKWYEFDDQFVTEVSSELVQSCQAYVLFY 538
>gi|428178162|gb|EKX47038.1| hypothetical protein GUITHDRAFT_106951 [Guillardia theta CCMP2712]
Length = 866
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 19/166 (11%)
Query: 171 QVNLYTILTKFNN-ESEKEYKTY-------KENFLKRFEITSLPPYLILYVKRFTKNTFF 222
Q+ L LTKF + E+ E+ + K + S+P ++I ++KRF+++ +
Sbjct: 703 QITLQDCLTKFTSTETLSEHDMWYCSRCKEARRARKTMSLWSVPNFVIFHLKRFSEDESY 762
Query: 223 V--EKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP 280
EK T V FP++++D L+P V+ ++ A+ +YDL A I H G+
Sbjct: 763 GGREKIETCVQFPLEDLD----LSPYVR-----SLQRPGDAEDNPYLYDLYAVINHYGDA 813
Query: 281 SNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELR 326
G Y G +WY D VT + + AY+ Y LR
Sbjct: 814 GFGHYTAFALSPGNDQWYLFDDSRVTKAAKESVCSQAAYVLFYRLR 859
>gi|118399164|ref|XP_001031908.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89286243|gb|EAR84245.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 680
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 145/357 (40%), Gaps = 78/357 (21%)
Query: 1 ALCHVTPLRDYFL-----REINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
L +V PL DYFL +EINY G + Q+F ELM +WN + S++ P
Sbjct: 101 CLSNVPPLCDYFLSKLHEKEINYDSFLGSQGK----ITQQFAELMIDMWNTSD--SYIIP 154
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRA--LNGTKKKDSSIVYKTFLGSMK 113
+ L+A+ + QF Q D +FL++ ++ LH L +++ ++ + +
Sbjct: 155 QKFLRAIGNFG-PQFADGSQQDSHEFLAFLMDILHEVSQLTNQLQQNKQNFFEIYKDLNR 213
Query: 114 VKTRKIPPVELEEK-----------------VRQRLLLTEEYKETETESPFLYLTCD--- 153
VK + P +E ++ +R R ++ + + + +T+S L C+
Sbjct: 214 VKQK--PYIEGKDYNGNDYEKYAKECWKEYLMRNRSIIVDLF-QGQTKSTLRCLKCNTVS 270
Query: 154 ----------LPPPP------LFKDEVLENIIPQVNLYTILTKFNNESEKE--------- 188
+P P L +E +L + +F E + E
Sbjct: 271 HKFETFMYLSVPIPDSQKSKKLSSKRSIEEDSESFSLQRCIQEFTKEEKLERGELWFCPK 330
Query: 189 YKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVK 248
K ++E+ K+ ++ +P LI+++KRF N K ++FP+KN D + + +
Sbjct: 331 CKKHQES-TKKIDLWKMPNILIIHLKRFEFNKDRRCKLSNKIDFPIKNFDISSLTAGKQR 389
Query: 249 AKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHV 305
+ +YDL A H G S+G Y + ++ WY D V
Sbjct: 390 ---------------DIPIYDLFAVSNHGGTLSSGHYTSYAKNRIDQNWYFFNDTQV 431
>gi|119626776|gb|EAX06371.1| ubiquitin specific peptidase 33, isoform CRA_e [Homo sapiens]
Length = 942
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ + P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 598 NGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 654
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 655 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 703
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 704 NAEAYVLFY 712
>gi|380023879|ref|XP_003695737.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Apis
florea]
Length = 1001
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 131/298 (43%), Gaps = 25/298 (8%)
Query: 32 LVQRFGELMRKLWNPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHR 91
+V+ ++++ LW + +KS +SPH++ AV + + QF+ EQ D +FL++ L+ +H
Sbjct: 715 VVEEVAQVIKALWRGQ-YKS-ISPHDLKIAVGQY-KLQFESYEQQDSHEFLTFLLDWMHN 771
Query: 92 ALNGTKKK--DSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLY 149
L K + +I K + +M + R I ++R + + + + T F
Sbjct: 772 DLKKNCKVPLEMTIAEKAWDKAMGSQ-RSIISDLFFGQLRSTITCSFCKQSSTTYETFNS 830
Query: 150 LTCDL--PPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPP 207
LT L D +L+ + Q + K E K+F+ L P
Sbjct: 831 LTMSLLHSNRCTLNDCILKFVSGQKVVGWKCPKCQTPREA---------TKKFDFVKLAP 881
Query: 208 YLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTM 267
+++++ RF ++ ++EK T V+FP+ DF L P + A ST +++ S
Sbjct: 882 IIVIHLNRFAESGGWLEKRNTAVDFPL--TDFN--LKPYLVADNNSTAISNIRSYSYSYS 937
Query: 268 YDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITL--TEAYIQIY 323
++N H G G Y + KWY+ D VT++ + T AY+ Y
Sbjct: 938 LYAMSN--HYGTMEGGHYTAFCKNAVQNKWYKYDDQTVTEVSVNQVRSQNTSAYLLFY 993
>gi|403258399|ref|XP_003921756.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33 [Saimiri boliviensis boliviensis]
Length = 1020
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 699 NGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 755
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 756 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 804
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 805 NAEAYVLFY 813
>gi|58477257|gb|AAH89315.1| Usp33 protein, partial [Mus musculus]
Length = 954
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 610 NGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 666
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 667 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 715
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 716 NAEAYVLFY 724
>gi|344248884|gb|EGW04988.1| Transient receptor potential cation channel subfamily M member 7
[Cricetulus griseus]
Length = 2128
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 130/342 (38%), Gaps = 44/342 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
LC+++PL +YFL +++ + + F LM +W + VSP L
Sbjct: 1816 CLCNISPLVEYFLSGKYITALQKDCSE----VTTAFAYLMTDMWLGDS--DCVSPEIFLS 1869
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
A+ + T+Q D +FL + LN LH AL KK Y+ S + RK+
Sbjct: 1870 ALGSLYPAFLKKTQQ-DAQEFLIYVLNELHEAL---KKHCRRRAYER--RSSQKCCRKV- 1922
Query: 121 PVELEEKVRQRLL-------LTEEYKETETESPFLYLTCDLPPPPLFK---DEVLENIIP 170
+ E + RL +T E T ++ LP P ++ + L+
Sbjct: 1923 -MASETSIITRLFEGQLNYSITCLKCENCTYKNEVFTVLSLPIPSEYECSLQDCLQCFFQ 1981
Query: 171 QVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIV 230
Q L +NN+ + K+ R I+ P ++ ++KRF K T +
Sbjct: 1982 QDTL-----TWNNQIHCSFCEIKQETAVRATISKAPKIIVFHLKRFDIQGSVKRKLRTDI 2036
Query: 231 NFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLY 290
+P+ N+D + P + + Y+L A + H G+ G Y
Sbjct: 2037 RYPLTNLDITPYICPVFR---------------KHPKYNLCAVVNHFGDLDGGHYTAFCK 2081
Query: 291 HKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
+ WY D V++I + AY+ Y + PT
Sbjct: 2082 NSVTQAWYSFDDTRVSEIPDTSVQTATAYLLFYSCQPFSIPT 2123
>gi|313223609|emb|CBY41987.1| unnamed protein product [Oikopleura dioica]
Length = 432
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 28/173 (16%)
Query: 172 VNLYTILTKFNNESEKEY----KTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNP 227
+NL+TI K E E+ Y K +++ F K +I LPP LIL++KRF N F +K
Sbjct: 275 LNLFTIEEKLR-EGEEWYCPHCKEHQQAF-KHMQIWKLPPVLILHLKRFHYNRIFRDKVC 332
Query: 228 TIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRV 287
+V+FP + +D L K Y+L+A H G G Y
Sbjct: 333 DMVHFPTRGLDMSPYLLGPGAGK---------------ARYNLLAVSNHMGRLGGGHYTA 377
Query: 288 HLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTT------PSPTAM 334
++ H W D V++ + AY+ +Y +R T P TAM
Sbjct: 378 NVLHTPTNNWLNFNDSFVSNATEDQSVSSSAYVLVY-VRDTEDWFPHPVSTAM 429
>gi|28972047|dbj|BAC65477.1| mKIAA0055 protein [Mus musculus]
Length = 1108
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 143/356 (40%), Gaps = 76/356 (21%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 784 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 837
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT------------------- 96
+ + + QF + Q D + L + ++ LH LN
Sbjct: 838 KD-FKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNEHLDDLQA 896
Query: 97 --------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFL 148
K+ + SI+ F G K + + R+R + T F+
Sbjct: 897 AEHAWQKHKQLNESIIVALFQGQFKSTVQCL-------TCRRR---------SRTFEAFM 940
Query: 149 YLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPY 208
YL+ LP K L++ + + LT NN + + + LK+ EI LPP
Sbjct: 941 YLS--LPLASTSKC-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPV 996
Query: 209 LILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTM 267
L++++KRF+ + + +K T V+FP++N+D ++ P+ K
Sbjct: 997 LLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLK----------------K 1040
Query: 268 YDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
Y+L + H G G Y + + +W++ D V+DI + + AYI Y
Sbjct: 1041 YNLFSVSNHYGGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1096
>gi|357197190|ref|NP_001239415.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 3 [Mus musculus]
Length = 901
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 557 NGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 613
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 614 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 662
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 663 NAEAYVLFY 671
>gi|148696218|gb|EDL28165.1| ubiquitin specific peptidase 8, isoform CRA_c [Mus musculus]
Length = 1080
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 143/356 (40%), Gaps = 76/356 (21%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 756 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 809
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT------------------- 96
+ + + QF + Q D + L + ++ LH LN
Sbjct: 810 KD-FKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNEHLDDLQA 868
Query: 97 --------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFL 148
K+ + SI+ F G K + + R+R + T F+
Sbjct: 869 AEHAWQKHKQLNESIIVALFQGQFKSTVQCL-------TCRRR---------SRTFEAFM 912
Query: 149 YLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPY 208
YL+ LP K L++ + + LT NN + + + LK+ EI LPP
Sbjct: 913 YLS--LPLASTSKC-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPV 968
Query: 209 LILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTM 267
L++++KRF+ + + +K T V+FP++N+D ++ P+ K
Sbjct: 969 LLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLK----------------K 1012
Query: 268 YDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
Y+L + H G G Y + + +W++ D V+DI + + AYI Y
Sbjct: 1013 YNLFSVSNHYGGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068
>gi|148679978|gb|EDL11925.1| ubiquitin specific peptidase 33, isoform CRA_c [Mus musculus]
Length = 897
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 557 NGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 613
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 614 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 662
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 663 NAEAYVLFY 671
>gi|116008148|ref|NP_001070144.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Mus musculus]
Length = 897
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 557 NGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 613
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 614 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 662
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 663 NAEAYVLFY 671
>gi|20071587|gb|AAH27052.1| Usp8 protein, partial [Mus musculus]
Length = 673
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 143/356 (40%), Gaps = 76/356 (21%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 349 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 402
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT------------------- 96
+ + + QF + Q D + L + ++ LH LN
Sbjct: 403 KD-FKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNEHLDDLQA 461
Query: 97 --------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFL 148
K+ + SI+ F G K + + R+R + T F+
Sbjct: 462 AEHAWQKHKQLNESIIVALFQGQFKSTVQCL-------TCRRR---------SRTFEAFM 505
Query: 149 YLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPY 208
YL+ LP K L++ + + LT NN + + + LK+ EI LPP
Sbjct: 506 YLS--LPLASTSKC-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPV 561
Query: 209 LILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTM 267
L++++KRF+ + + +K T V+FP++N+D ++ P+ K
Sbjct: 562 LLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLK----------------K 605
Query: 268 YDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
Y+L + H G G Y + + +W++ D V+DI + + AYI Y
Sbjct: 606 YNLFSVSNHYGGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 661
>gi|354471307|ref|XP_003497884.1| PREDICTED: LOW QUALITY PROTEIN: putative ubiquitin
carboxyl-terminal hydrolase 50-like [Cricetulus griseus]
Length = 450
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 129/342 (37%), Gaps = 44/342 (12%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
LC+++PL +YFL +++ + + F LM +W VSP L
Sbjct: 86 CLCNISPLVEYFLSGKYITALQKDCSE----VTTAFAYLMTDMW--LGDSDCVSPEIFLS 139
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
A+ + T+Q D +FL + LN LH AL KK Y+ S + RK+
Sbjct: 140 ALGSLYPAFLKKTQQ-DAQEFLIYVLNELHEAL---KKHCRRRAYER--RSSQKCCRKV- 192
Query: 121 PVELEEKVRQRLL-------LTEEYKETETESPFLYLTCDLPPPPLFK---DEVLENIIP 170
+ E + RL +T E T ++ LP P ++ + L+
Sbjct: 193 -MASETSIITRLFEGQLNYSITCLKCENCTYKNEVFTVLSLPIPSEYECSLQDCLQCFFQ 251
Query: 171 QVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIV 230
Q L +NN+ + K+ R I+ P ++ ++KRF K T +
Sbjct: 252 QDTL-----TWNNQIHCSFCEIKQETAVRATISKAPKIIVFHLKRFDIQGSVKRKLRTDI 306
Query: 231 NFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLY 290
+P+ N+D + P + + Y+L A + H G+ G Y
Sbjct: 307 RYPLTNLDITPYICPVFR---------------KHPKYNLCAVVNHFGDLDGGHYTAFCK 351
Query: 291 HKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
+ WY D V++I + AY+ Y + PT
Sbjct: 352 NSVTQAWYSFDDTRVSEIPDTSVQTATAYLLFYSCQPFSIPT 393
>gi|11993469|gb|AAG42753.1|AF302662_1 ubiquitin-specific protease 8, partial [Arabidopsis thaliana]
Length = 470
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 15/128 (11%)
Query: 197 LKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMY 256
+K+ ++ LP L++++KRF+ + F K V+FP+ N+D L+ + K T Y
Sbjct: 354 IKKLDLWRLPEILVIHLKRFSYSRFMKNKLEAYVDFPLDNLD----LSSYISYKNGQTTY 409
Query: 257 DLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLT 316
Y L A H G G Y +++H G +WY+ D HV I + I +
Sbjct: 410 ----------RYMLYAISNHYGSMGGGHYTAYVHHGG-DRWYDFDDSHVHQISQEKIKTS 458
Query: 317 EAYIQIYE 324
AY+ Y+
Sbjct: 459 AAYVLFYK 466
>gi|18698437|gb|AAL78316.1|AF383174_1 pVHL-interacting deubiquitinating enzyme 1 [Mus musculus]
Length = 909
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 565 NGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 621
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 622 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 670
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 671 NAEAYVLFY 679
>gi|13529590|gb|AAH05506.1| Usp33 protein, partial [Mus musculus]
Length = 956
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 612 NGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 668
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 669 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 717
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 718 NAEAYVLFY 726
>gi|149026259|gb|EDL82502.1| rCG28827, isoform CRA_c [Rattus norvegicus]
Length = 680
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 565 NGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 621
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 622 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 670
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 671 NAEAYVLFY 679
>gi|55731067|emb|CAH92249.1| hypothetical protein [Pongo abelii]
Length = 789
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 566 NGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 622
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 623 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 671
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 672 NAEAYVLFY 680
>gi|357588457|ref|NP_001239509.1| ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Mus musculus]
Length = 1091
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 143/356 (40%), Gaps = 76/356 (21%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 767 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 820
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT------------------- 96
+ + + QF + Q D + L + ++ LH LN
Sbjct: 821 KD-FKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNEHLDDLQA 879
Query: 97 --------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFL 148
K+ + SI+ F G K + + R+R + T F+
Sbjct: 880 AEHAWQKHKQLNESIIVALFQGQFKSTVQCL-------TCRRR---------SRTFEAFM 923
Query: 149 YLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPY 208
YL+ LP K L++ + + LT NN + + + LK+ EI LPP
Sbjct: 924 YLS--LPLASTSKC-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPV 979
Query: 209 LILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTM 267
L++++KRF+ + + +K T V+FP++N+D ++ P+ K
Sbjct: 980 LLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLK----------------K 1023
Query: 268 YDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
Y+L + H G G Y + + +W++ D V+DI + + AYI Y
Sbjct: 1024 YNLFSVSNHYGGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1079
>gi|354468064|ref|XP_003496487.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Cricetulus
griseus]
Length = 898
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 558 NGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 614
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 615 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 663
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 664 NAEAYVLFY 672
>gi|116008150|ref|NP_573510.2| ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Mus musculus]
gi|281312489|sp|Q8R5K2.2|UBP33_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33; AltName:
Full=VHL-interacting deubiquitinating enzyme 1
gi|148921994|gb|AAI46303.1| Ubiquitin specific peptidase 33 [synthetic construct]
gi|151556748|gb|AAI48746.1| Ubiquitin specific peptidase 33 [synthetic construct]
Length = 909
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 565 NGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 621
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 622 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 670
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 671 NAEAYVLFY 679
>gi|33438289|dbj|BAC65724.2| mKIAA1097 protein [Mus musculus]
Length = 837
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 493 NGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 549
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 550 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 598
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 599 NAEAYVLFY 607
>gi|149026258|gb|EDL82501.1| rCG28827, isoform CRA_b [Rattus norvegicus]
Length = 672
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 557 NGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 613
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 614 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 662
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 663 NAEAYVLFY 671
>gi|148679976|gb|EDL11923.1| ubiquitin specific peptidase 33, isoform CRA_a [Mus musculus]
Length = 901
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 557 NGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 613
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 614 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 662
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 663 NAEAYVLFY 671
>gi|297696632|ref|XP_002825491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Pongo
abelii]
gi|395746706|ref|XP_002825492.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Pongo
abelii]
gi|395746709|ref|XP_003778495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Pongo abelii]
Length = 1118
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 143/343 (41%), Gaps = 50/343 (14%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 794 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 847
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYK----TFLGS 111
+ + + QF Q D + L + ++ LH LN K D+ YK L
Sbjct: 848 KD-FKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLN---KADNRKRYKEENNDHLDD 903
Query: 112 MKVK----------TRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK 161
K I + + + + +K++ T F+YL+ LP K
Sbjct: 904 FKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLS--LPLASTSK 961
Query: 162 DEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTF 221
L++ + + LT NN + + + LK+ EI LPP L++++KRF+ +
Sbjct: 962 C-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGR 1019
Query: 222 FVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP 280
+ +K T V+FP++N+D ++ P+ K Y+L + H G
Sbjct: 1020 WKQKLQTSVDFPLENLDLSQYVIGPKNNLK----------------KYNLFSVSNHYGGL 1063
Query: 281 SNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + +W++ D V+DI + + AYI Y
Sbjct: 1064 DGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|40789062|dbj|BAA06225.2| KIAA0055 [Homo sapiens]
Length = 1120
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 143/343 (41%), Gaps = 50/343 (14%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 796 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 849
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYK----TFLGS 111
+ + + QF Q D + L + ++ LH LN K D+ YK L
Sbjct: 850 KD-FKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLN---KADNRKRYKEENNDHLDD 905
Query: 112 MKVK----------TRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK 161
K I + + + + +K++ T F+YL+ LP K
Sbjct: 906 FKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLS--LPLASTSK 963
Query: 162 DEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTF 221
L++ + + LT NN + + + LK+ EI LPP L++++KRF+ +
Sbjct: 964 C-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGR 1021
Query: 222 FVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP 280
+ +K T V+FP++N+D ++ P+ K Y+L + H G
Sbjct: 1022 WKQKLQTSVDFPLENLDLSQYVIGPKNNLK----------------KYNLFSVSNHYGGL 1065
Query: 281 SNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + +W++ D V+DI + + AYI Y
Sbjct: 1066 DGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1108
>gi|344278786|ref|XP_003411173.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Loxodonta
africana]
Length = 1108
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 764 NGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 820
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 821 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 869
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 870 NAEAYVLFY 878
>gi|190684690|ref|NP_005145.3| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
gi|190684692|ref|NP_001122082.1| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
gi|190684694|ref|NP_001122083.1| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
gi|731046|sp|P40818.1|UBP8_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin
isopeptidase Y; Short=hUBPy; AltName: Full=Ubiquitin
thioesterase 8; AltName:
Full=Ubiquitin-specific-processing protease 8
gi|83405557|gb|AAI10591.1| Ubiquitin specific peptidase 8 [Homo sapiens]
gi|119597805|gb|EAW77399.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
gi|119597806|gb|EAW77400.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
gi|119597807|gb|EAW77401.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
gi|168278493|dbj|BAG11126.1| ubiquitin carboxyl-terminal hydrolase 8 [synthetic construct]
Length = 1118
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 143/343 (41%), Gaps = 50/343 (14%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 794 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 847
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYK----TFLGS 111
+ + + QF Q D + L + ++ LH LN K D+ YK L
Sbjct: 848 KD-FKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLN---KADNRKRYKEENNDHLDD 903
Query: 112 MKVK----------TRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFK 161
K I + + + + +K++ T F+YL+ LP K
Sbjct: 904 FKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLS--LPLASTSK 961
Query: 162 DEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTF 221
L++ + + LT NN + + + LK+ EI LPP L++++KRF+ +
Sbjct: 962 C-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGR 1019
Query: 222 FVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEP 280
+ +K T V+FP++N+D ++ P+ K Y+L + H G
Sbjct: 1020 WKQKLQTSVDFPLENLDLSQYVIGPKNNLK----------------KYNLFSVSNHYGGL 1063
Query: 281 SNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
G Y + + +W++ D V+DI + + AYI Y
Sbjct: 1064 DGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|74180673|dbj|BAE25565.1| unnamed protein product [Mus musculus]
Length = 880
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 565 NGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 621
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 622 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 670
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 671 NAEAYVLFY 679
>gi|148679977|gb|EDL11924.1| ubiquitin specific peptidase 33, isoform CRA_b [Mus musculus]
Length = 909
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 565 NGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 621
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 622 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 670
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 671 NAEAYVLFY 679
>gi|60360166|dbj|BAD90302.1| mKIAA4155 protein [Mus musculus]
Length = 747
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 1 ALCHVTPLRDYFLREINYARVKRP-PGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEML 59
L + PL +YFL++ A + R P + + + EL++++W+ R+ +HV+P M
Sbjct: 332 CLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRD--THVAPR-MF 388
Query: 60 QAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKK-----------DSSIVYKTF 108
+ V QF +Q D + L++ L+ LH LN KKK ++V K
Sbjct: 389 KTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLEPKDANGRPDAVVAKEA 448
Query: 109 LGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLE 166
+ +++ + + L+ E K + T PF YLT P PL KD ++E
Sbjct: 449 WENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTL---PLPLKKDRIME 503
>gi|5058999|gb|AAD38869.1|AF057146_1 putative deubiquitinating enzyme UBPY [Mus musculus]
Length = 1080
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 143/356 (40%), Gaps = 76/356 (21%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 756 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 809
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT------------------- 96
+ + + QF + Q D + L + ++ LH LN
Sbjct: 810 KD-FKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNEHLDDLQA 868
Query: 97 --------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFL 148
K+ + SI+ F G K + + R+R + T F+
Sbjct: 869 AEHAWQKHKQLNESIIVALFQGQFKSTVQCL-------TCRRR---------SRTFEAFM 912
Query: 149 YLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPY 208
YL+ LP K L++ + + LT NN + + + LK+ EI LPP
Sbjct: 913 YLS--LPLASTSKC-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPV 968
Query: 209 LILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTM 267
L++++KRF+ + + +K T V+FP++N+D ++ P+ K
Sbjct: 969 LLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLK----------------K 1012
Query: 268 YDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
Y+L + H G G Y + + +W++ D V+DI + + AYI Y
Sbjct: 1013 YNLFSVSNHYGGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068
>gi|31981044|ref|NP_062703.2| ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Mus musculus]
gi|44888442|sp|Q80U87.2|UBP8_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin
isopeptidase Y; Short=mUBPy; AltName: Full=Ubiquitin
thioesterase 8; AltName:
Full=Ubiquitin-specific-processing protease 8
gi|29747898|gb|AAH50947.1| Ubiquitin specific peptidase 8 [Mus musculus]
gi|38181867|gb|AAH61465.1| Ubiquitin specific peptidase 8 [Mus musculus]
gi|42490777|gb|AAH66126.1| Ubiquitin specific peptidase 8 [Mus musculus]
Length = 1080
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 143/356 (40%), Gaps = 76/356 (21%)
Query: 1 ALCHVTPLRDYFLR-----EINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSP 55
LC+ L DYF R +IN + + G+ + + FG +M+ LW + ++SP
Sbjct: 756 CLCNAPHLADYFNRNCYQDDINRSNLLGHKGE----VAEEFGIIMKALWTGQY--RYISP 809
Query: 56 HEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGT------------------- 96
+ + + QF + Q D + L + ++ LH LN
Sbjct: 810 KD-FKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNRKRHKEENNEHLDDLQA 868
Query: 97 --------KKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETESPFL 148
K+ + SI+ F G K + + R+R + T F+
Sbjct: 869 AEHAWQKHKQLNESIIVALFQGQFKSTVQCL-------TCRRR---------SRTFEAFM 912
Query: 149 YLTCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPY 208
YL+ LP K L++ + + LT NN + + + LK+ EI LPP
Sbjct: 913 YLS--LPLASTSKC-TLQDCLRLFSKEEKLTD-NNRFYCSHCRARRDSLKKIEIWKLPPV 968
Query: 209 LILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGD-ILTPEVKAKYESTMYDLVKAKYESTM 267
L++++KRF+ + + +K T V+FP++N+D ++ P+ K
Sbjct: 969 LLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLK----------------K 1012
Query: 268 YDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
Y+L + H G G Y + + +W++ D V+DI + + AYI Y
Sbjct: 1013 YNLFSVSNHYGGLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068
>gi|405966260|gb|EKC31567.1| Ubiquitin carboxyl-terminal hydrolase 20 [Crassostrea gigas]
Length = 914
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N LK + LP L +++KRF ++ F+ K + V+FP+ ++D L + ++
Sbjct: 490 NGLKFSRVLELPEILCIHLKRF-RHEFYSSKISSYVSFPLDSLDMKKYLHRDCSSQV--- 545
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
T++DL A I H G G Y + + +WYE D +VT++ +
Sbjct: 546 -----------TVFDLHAVICHHGTAGGGHYTAYCLNYLNDQWYEFDDQYVTEVEVGQVI 594
Query: 315 LTEAYIQIYELR 326
EAY+ Y R
Sbjct: 595 NCEAYVLFYRKR 606
>gi|392887711|ref|NP_493434.3| Protein USP-3 [Caenorhabditis elegans]
gi|379657283|emb|CAC14423.3| Protein USP-3 [Caenorhabditis elegans]
Length = 550
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 118/293 (40%), Gaps = 47/293 (16%)
Query: 41 RKLW---NPRNFKSHVSPHEMLQAVVLWSRKQFQFTEQSDPIDFLSWFLNTLH------R 91
RKL + R+F+ +P+E +A + + F+ Q D +F+ +F+++LH R
Sbjct: 287 RKLLISQSARSFREPTAPNEFREAFISVCPR-FRGFRQHDSHEFMRYFMDSLHTEMRKCR 345
Query: 92 ALNGTKKKDSSIVYKTFLGSMKVKTRKIPPVELEEKVRQRLLLTEEYKETETE-SPFLYL 150
L G + + K F G++ Q ++ + + + F+ L
Sbjct: 346 KLPGMPDDKHTPISKYFEGTL-----------------QSSVICQTCRNCSNKIDEFMDL 388
Query: 151 TCDLPPPPLFKDEVLENIIPQVNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLI 210
+ D+P L + + +L K + KT K+ K+ I LP L
Sbjct: 389 SLDIPAQRNASKVRLSDCLSTFFKLEMLEKGEKPECAKCKT-KQTCSKQMFIRKLPQVLC 447
Query: 211 LYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDL 270
L++KRF N KN I++FP+ +D LT + + Y L
Sbjct: 448 LHMKRFRDNG---GKNDAIIDFPMGQLDVTQFLTDD--------------SDEAPCTYSL 490
Query: 271 VANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIY 323
+ IVH G + + + K G+W++ D V + ++ +AY+ +Y
Sbjct: 491 QSIIVHIGYGCGSGHYI-AFGKRNGRWFQFDDTVVKGVDEAHVSKQKAYVLLY 542
>gi|332809270|ref|XP_003308214.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Pan
troglodytes]
Length = 828
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 590 NGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 646
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 647 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 695
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 696 NAEAYVLFY 704
>gi|326925187|ref|XP_003208801.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Meleagris
gallopavo]
Length = 910
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 566 NGVKFCKVQKFPEILCIHLKRFRHELMFSTKIGTHVSFPLEGLDLQPFLAKDSPAQI--- 622
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 623 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 671
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 672 NAEAYVLFY 680
>gi|297278990|ref|XP_002808266.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33-like [Macaca mulatta]
Length = 1001
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 195 NFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKAKYEST 254
N +K ++ P L +++KRF F K T V+FP++ +D L + A+
Sbjct: 657 NGVKFCKVQKFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQI--- 713
Query: 255 MYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGIGKWYEIQDLHVTDILPQMIT 314
YDL++ I H G S+G Y + + WYE D VT++ +
Sbjct: 714 -----------VTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQ 762
Query: 315 LTEAYIQIY 323
EAY+ Y
Sbjct: 763 NAEAYVLFY 771
>gi|291290972|ref|NP_001073699.2| ubiquitin specific peptidase 50 [Bos taurus]
Length = 378
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 131/346 (37%), Gaps = 52/346 (15%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
LC ++PL +YFL +++ + + F +M +W VSP E+ +
Sbjct: 66 CLCSISPLVEYFLSGKYINALQKDCSE----VATAFAYVMTDMW--LGDSDCVSP-EIFR 118
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVKTRKIP 120
+ + F Q D +FL + LN LH AL ++ + + R IP
Sbjct: 119 SALGNLYPVFMKKTQQDAQEFLIYVLNELHEALKKYHRRKA------------YEKRSIP 166
Query: 121 PVELEEKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENI---IP---QVNL 174
+ + ++T + E + + L C+ +K+EV I IP + +L
Sbjct: 167 RCCRKMIANESSIITRLF-EGQLSYSIVCLKCE---NCTYKNEVFTIISLPIPSEYECSL 222
Query: 175 YTILTKF--------NNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKN 226
L F NN+ + K+ R I+ +P ++ ++KRF K
Sbjct: 223 QDCLQCFFQQDTLTWNNQIHCSFCETKQEAAVRATISKVPKTIVFHLKRFDILGTMKRKL 282
Query: 227 PTIVNFPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYR 286
T +++P+ N+D + P + + Y+L A + H G+ G Y
Sbjct: 283 RTDIHYPLTNLDLTPYICPIFR---------------KHPKYNLCAVVNHFGDLDGGHYT 327
Query: 287 VHLYHKGIGKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
+ WY D V++I + AY+ Y + PT
Sbjct: 328 AFSKNSVTQAWYSFDDTRVSEIPDTAVQTAAAYLLFYSCQPFSIPT 373
>gi|260801088|ref|XP_002595428.1| hypothetical protein BRAFLDRAFT_119038 [Branchiostoma floridae]
gi|229280674|gb|EEN51440.1| hypothetical protein BRAFLDRAFT_119038 [Branchiostoma floridae]
Length = 922
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 19/158 (12%)
Query: 190 KTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVNFPVKNVDFGDILTPEVKA 249
K + K+ + SLP LI+ +KRF + K T V+FPV N+D + P V
Sbjct: 622 KKIQHGTTKKLSLWSLPDVLIIQLKRFKQVGMRRMKLYTSVDFPVSNLD----MKPHVAR 677
Query: 250 KYESTMYDL---------------VKAKYESTMYDLVANIVHDGEPSNGTYRVHLYHKGI 294
+ L A++ YDL A H G + G Y +
Sbjct: 678 RNYGNSGGLGLLTSWSPWRRHQHRTTARHPDYFYDLYAVCNHHGNMTGGHYTAFSKNPVD 737
Query: 295 GKWYEIQDLHVTDILPQMITLTEAYIQIYELRTTPSPT 332
G+WY+ D V + + + ++AYI Y+ R++ +P+
Sbjct: 738 GRWYKFDDTKVLPVSDEDVQTSDAYILFYQSRSSSAPS 775
>gi|198470304|ref|XP_001355290.2| GA13118 [Drosophila pseudoobscura pseudoobscura]
gi|198145386|gb|EAL32347.2| GA13118 [Drosophila pseudoobscura pseudoobscura]
Length = 872
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 133/334 (39%), Gaps = 37/334 (11%)
Query: 1 ALCHVTPLRDYFLREINYARVKRPPGDSSFLLVQRFGELMRKLWNPRNFKSHVSPHEMLQ 60
L H T L FLR + +R L++ F +L++++W V+P ++ +
Sbjct: 564 CLSHTTEL-TRFLRTHHGSRSSATKDQ---LILFEFAKLIQEMWTSSVHT--VTPMDLKR 617
Query: 61 AVVLWSRKQFQFTEQSDPIDFLSWFLNTLHRALNGTKKKDSSIVYKTFLGSMKVK----- 115
A R + +Q D +FL +FL++LH ALN K ++ + + K
Sbjct: 618 AFSAKHRMYSDYNQQ-DAQEFLRFFLDSLHSALNSGIKGETLNIDDNLSDNKKADLTWEW 676
Query: 116 -TRKIPPVELE---EKVRQRLLLTEEYKETETESPFLYLTCDLPPPPLFKDEVLENIIPQ 171
TR + + +++ L T + T PF L+ LP K E ++ +
Sbjct: 677 YTRHENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIR 736
Query: 172 VNLYTILTKFNNESEKEYKTYKENFLKRFEITSLPPYLILYVKRFTKNTFFVEKNPTIVN 231
IL + + KT ++ K F I P YL++++KRF++ + K IV
Sbjct: 737 EE---ILDGDEMPTCSKCKTRRK-CTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVE 790
Query: 232 FPVKNVDFGDILTPEVKAKYESTMYDLVKAKYESTMYDLVANIVHDGEPSNGTYRVHLYH 291
FP + D M + Y L A H G + G Y H
Sbjct: 791 FPTADRDL--------------NMASYGANSNSNVHYSLYAISNHMGSTAGGHYTALCKH 836
Query: 292 KGIGKWYEIQDLHVTDILPQ-MITLTEAYIQIYE 324
KW+E D V+D + + + + AYI YE
Sbjct: 837 PVSRKWHEFNDNIVSDSVSENFLVSSSAYILFYE 870
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.137 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,587,025,361
Number of Sequences: 23463169
Number of extensions: 238494311
Number of successful extensions: 559585
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 1907
Number of HSP's that attempted gapping in prelim test: 552976
Number of HSP's gapped (non-prelim): 4702
length of query: 337
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 194
effective length of database: 9,003,962,200
effective search space: 1746768666800
effective search space used: 1746768666800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)