BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13437
(80 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O88884|AKAP1_RAT A-kinase anchor protein 1, mitochondrial OS=Rattus norvegicus
GN=Akap1 PE=2 SV=1
Length = 854
Score = 68.9 bits (167), Expect = 9e-12, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVP 61
G W+RAQ++A ++++VDYGGY ++ LRQIR+DF++LPFQ E L ++VP
Sbjct: 723 GAWWRAQVVASYEETNEVEIRYVDYGGYKRVKVDVLRQIRSDFVTLPFQGAEVLLDSVVP 782
Query: 62 VGTDGEYN 69
+ D ++
Sbjct: 783 LSDDDHFS 790
>sp|O08715|AKAP1_MOUSE A-kinase anchor protein 1, mitochondrial OS=Mus musculus GN=Akap1
PE=1 SV=4
Length = 857
Score = 68.9 bits (167), Expect = 9e-12, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVP 61
G W+RAQ++A ++++VDYGGY ++ LRQIR+DF++LPFQ E L ++VP
Sbjct: 726 GAWWRAQVVASYEETNEVEIRYVDYGGYKRVKVDVLRQIRSDFVTLPFQGAEVLLDSVVP 785
Query: 62 VGTDGEYN 69
+ D ++
Sbjct: 786 LSDDDHFS 793
>sp|Q92667|AKAP1_HUMAN A-kinase anchor protein 1, mitochondrial OS=Homo sapiens GN=AKAP1
PE=1 SV=1
Length = 903
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 46/68 (67%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVP 61
G W+RAQ++A ++++VDYGGY ++ LRQIR+DF++LPFQ E L +++P
Sbjct: 772 GAWWRAQVVASYEETNEVEIRYVDYGGYKRVKVDVLRQIRSDFVTLPFQGAEVLLDSVMP 831
Query: 62 VGTDGEYN 69
+ D +++
Sbjct: 832 LSDDDQFS 839
>sp|Q80VL1|TDRKH_MOUSE Tudor and KH domain-containing protein OS=Mus musculus GN=Tdrkh
PE=1 SV=1
Length = 560
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVP 61
G W+RA++L + N + + FVD+G LR +R+DFLSLPFQAIEC LA I P
Sbjct: 368 GSWYRARVLGT-LENGNLDLYFVDFGDNGDCALKDLRALRSDFLSLPFQAIECSLARIAP 426
Query: 62 VG 63
G
Sbjct: 427 TG 428
>sp|Q9Y2W6|TDRKH_HUMAN Tudor and KH domain-containing protein OS=Homo sapiens GN=TDRKH
PE=1 SV=2
Length = 561
Score = 63.5 bits (153), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVP 61
G W+RA++L + N + + FVD+G LR +R+DFLSLPFQAIEC LA I P
Sbjct: 368 GSWYRARVLGT-LENGNLDLYFVDFGDNGDCPLKDLRALRSDFLSLPFQAIECSLARIAP 426
Query: 62 VGTDGE 67
G E
Sbjct: 427 SGDQWE 432
>sp|Q09285|YQK1_CAEEL KH domain-containing protein C56G2.1 OS=Caenorhabditis elegans
GN=C56G2.1/C56G2.2 PE=4 SV=2
Length = 867
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 3 GWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPV 62
WFRA + VKFVDYGGY + LRQIR D +SLPFQ+ E LA++ PV
Sbjct: 703 AWFRAVTVQYFDETDEVFVKFVDYGGYSKMARQDLRQIRTDLMSLPFQSTEVMLAHVRPV 762
Query: 63 GTDGEYN 69
DG N
Sbjct: 763 --DGTTN 767
>sp|Q9BXT4|TDRD1_HUMAN Tudor domain-containing protein 1 OS=Homo sapiens GN=TDRD1 PE=2
SV=2
Length = 1180
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANI 59
G W+RA + + + N +V FVDYG + LR I + FL+LPFQ I C LA+I
Sbjct: 777 GSWYRALVKEI-LPNGHVKVHFVDYGNIEEVTADELRMISSTFLNLPFQGIRCQLADI 833
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVP 61
W+RA +LA S V +VDYG + L L I L LP QAI+C LA + P
Sbjct: 558 WYRASVLAY-ASEESVLVGYVDYGNFEILSLMRLCPIIPKLLELPMQAIKCVLAGVKP 614
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPVG 63
W+RA +L + +V + DYG TL ++ I + L+LPFQ I C L ++ +
Sbjct: 1007 WYRAVVLGTS--DTDVEVLYADYGNIETLPLCRVQPITSSHLALPFQIIRCSLEGLMELN 1064
Query: 64 TDGEYNIILIVE 75
II++++
Sbjct: 1065 GSSSQLIIMLLK 1076
Score = 36.2 bits (82), Expect = 0.060, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVP 61
W RA I VDV V ++DYG + + + + + P AI+C +AN++P
Sbjct: 329 WNRAIIQNVDVQQKKAHVLYIDYGNEEIIPLNRIYHLNRNIDLFPPCAIKCFVANVIP 386
>sp|A9CPT4|TDRD1_ORYLA Tudor domain-containing protein 1 OS=Oryzias latipes GN=tdrd1 PE=2
SV=1
Length = 1133
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 2 GGWFRAQI--LAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANI 59
G W+RA + L DVV +V FVD+G + + LR I L LPFQA+ C LA +
Sbjct: 671 GKWYRAMVKELLGDVV----KVNFVDFGHNMIVGKGCLRSITPKLLKLPFQAVRCWLAGV 726
Query: 60 VPVGTD 65
P G++
Sbjct: 727 KPAGSE 732
Score = 49.3 bits (116), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPV 62
W+RAQ+LA + C V ++D+G ++ + LR I L+LP QAI C LA + PV
Sbjct: 452 WYRAQVLAYSTEKSVC-VGYIDFGNSEEVDLNHLRPISPALLALPKQAISCILAGVQPV 509
Score = 37.4 bits (85), Expect = 0.029, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLA 57
W+RA IL +V A V + DYG + S + I L LPF+ I C LA
Sbjct: 921 WYRAIIL--EVGEAEMSVVYADYGNSEKVPVSQILPIPTRLLQLPFKIIRCTLA 972
>sp|Q58EK5|TDRD1_DANRE Tudor domain-containing protein 1 OS=Danio rerio GN=tdrd1 PE=2 SV=2
Length = 1175
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPV 62
W+RA +L V +V FVDYG ++ + L+ I L LPFQAI C LA + PV
Sbjct: 691 WYRAMVLEV-CGEGKARVCFVDYGNSCEVDAAHLKAITQSLLKLPFQAIRCWLAGVEPV 748
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANI 59
W+RA++LA + C V ++D+G +E + LR I + L+L QAI C LA I
Sbjct: 470 WYRAKVLAYSSEDRVC-VGYIDFGNSEEVELNRLRPISKELLALATQAIPCSLAGI 524
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPV 62
W+RA+I AVDV + V ++D+G + +R + + ++P A++C +A + P+
Sbjct: 239 WYRAEIQAVDVARKTAGVFYIDFGNEENVALDHIRPLSENIDAVPPFALQCCIAGVKPL 297
Score = 38.1 bits (87), Expect = 0.018, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGL 56
W+RA +L V +A V + DYG T+ S++ I + L PFQ + C L
Sbjct: 942 WYRAVVLEVTTKHA--HVIYSDYGNMETVPLSSILPITKELLQHPFQIVRCAL 992
>sp|Q99MV1|TDRD1_MOUSE Tudor domain-containing protein 1 OS=Mus musculus GN=Tdrd1 PE=1
SV=2
Length = 1172
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVP 61
G W+RA + + + + + +V FVDYG + T L+ I FL LPFQ ++C L +I P
Sbjct: 771 GNWYRALVKEI-LPSGNVKVHFVDYGNVEEVTTDQLQAILPQFLLLPFQGMQCWLVDIQP 829
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVP 61
W+RA +LA S V +VDYG + L L I L LP QA+ C LA + P
Sbjct: 553 WYRASVLAY-ASEESVLVGYVDYGNFEILSLKRLCPIIPKLLDLPMQALNCVLAGVKP 609
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGL 56
W+RA +L + + +V + DYG TL S ++ I A L LPFQ I C L
Sbjct: 999 WYRAIVL--ETSESDVKVLYADYGNIETLPLSRVQPIPASHLELPFQIIRCSL 1049
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPVG 63
W RA + AVDV+ V ++DYG + ++ + P AI+C ++ ++P
Sbjct: 324 WNRAIVQAVDVLQRKAHVLYIDYGNEEMIPIDSVHPLSRGLDLFPPSAIKCCVSGVIP-- 381
Query: 64 TDGEYN 69
T GE++
Sbjct: 382 TAGEWS 387
>sp|Q14BI7|TDRD9_MOUSE Putative ATP-dependent RNA helicase TDRD9 OS=Mus musculus GN=Tdrd9
PE=1 SV=3
Length = 1383
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVP 61
+FRAQIL V S +V FVDYG ++ LR+I FL LPFQA+E + + P
Sbjct: 964 YFRAQILYVS--GNSAEVFFVDYGNRSHVDLDLLREIPCQFLELPFQALEFKICKMRP 1019
>sp|A6NAF9|TRD7A_DANRE Tudor domain-containing protein 7A OS=Danio rerio GN=tdrd7a PE=2
SV=2
Length = 1079
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 2 GGWFRAQI--LAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANI 59
G RAQ+ L+ D V +V F+D+G + + L Q+R F++LPFQA C LA +
Sbjct: 533 GAMLRAQVHQLSEDKV----KVYFLDHGFFDLVSRKTLFQLRDQFMTLPFQATTCQLAGL 588
Query: 60 VPVGTD 65
P TD
Sbjct: 589 EPFSTD 594
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFL----SLPFQAIECGLA 57
G W RA+I+ + + + F+D G +LE S LR+I FL ++P QAI+C L
Sbjct: 721 GKWARAEIINLHGSHV-LDILFLDLGLPASLEVSELREIPPIFLKELITIPPQAIKCLLE 779
Query: 58 NI 59
++
Sbjct: 780 DL 781
Score = 32.7 bits (73), Expect = 0.66, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANI 59
W R + + + N V +DYG Y + + L+ + +F LPFQ I LA++
Sbjct: 954 WHRVLVKGL-LTNGLVSVYELDYGKYELINYTQLQPLIEEFRQLPFQGISAQLADV 1008
>sp|Q4R3G4|RNF17_MACFA RING finger protein 17 OS=Macaca fascicularis GN=RNF17 PE=2 SV=2
Length = 1534
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVP 61
G W+RA+++ + + +VK+VD+G + +R+I+ +FL+ P +AI+C LA I P
Sbjct: 651 GIWYRAKVIGLPG-HQEVEVKYVDFGNTAKITIKDVRKIKDEFLTAPEKAIKCKLAYIEP 709
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 2 GGWFRAQILAVDVVNA-SCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIV 60
G W+RA+I+++ N S V+FVDYG L + L QI + P +AI+ LA
Sbjct: 1404 GLWYRAKIVSIKEFNPLSILVQFVDYGSTAKLTLNRLCQIPPHLMRYPARAIKVLLAGFK 1463
Query: 61 PVGTD-GEYNI 70
P D GE I
Sbjct: 1464 PPLRDLGETRI 1474
Score = 33.1 bits (74), Expect = 0.51, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPVG 63
W R QI+ + V + +V D G L + LR+++ + ++ ++EC L +I P G
Sbjct: 890 WRRGQIIRM-VTDTLVEVLLYDVGVELVVNVDCLRKLQENLKTMGRLSLECSLVDIRPAG 948
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPVG 63
W+R +++ +VV + +V+++D+G + L I + +P I C L N PVG
Sbjct: 1155 WYRGKVM--EVVGGAVRVQYLDHGFTEKIPQCHLYPILL-YPDIPQFCIPCQLHNTTPVG 1211
Query: 64 TDGEYNIILIVERI 77
+ + I +++++
Sbjct: 1212 NVWQPDAIEVLQQL 1225
>sp|Q3MHU3|TDRD9_RAT Putative ATP-dependent RNA helicase TDRD9 OS=Rattus norvegicus
GN=Tdrd9 PE=2 SV=3
Length = 1384
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVP 61
+FRAQIL V S +V FVDYG ++ LR+I L LPFQA+E + + P
Sbjct: 965 YFRAQILYVS--GNSAEVFFVDYGNRSHVDLDLLREIPCQLLELPFQALEFKICKMRP 1020
>sp|Q9BXT8|RNF17_HUMAN RING finger protein 17 OS=Homo sapiens GN=RNF17 PE=1 SV=3
Length = 1623
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVP 61
G W+RA+++ + + +VK+VD+G + +R+I+ +FL+ P +AI+C LA I P
Sbjct: 740 GIWYRAKVIGLPG-HQEVEVKYVDFGNTAKITIKDVRKIKDEFLNAPEKAIKCKLAYIEP 798
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 2 GGWFRAQILAVDVVNA-SCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIV 60
G W+RA+I+A+ N S V+FVDYG L + L QI + + P +AI+ LA
Sbjct: 1493 GLWYRAKIVAIKEFNPLSILVQFVDYGSTAKLTLNRLCQIPSHLMRYPARAIKVLLAGFK 1552
Query: 61 PVGTD-GEYNI 70
P D GE I
Sbjct: 1553 PPLRDLGETRI 1563
Score = 32.7 bits (73), Expect = 0.70, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPVG 63
W R QI+ + V + +V D G L + LR++ + ++ ++EC L +I P G
Sbjct: 979 WRRGQIIRM-VTDTLVEVLLYDVGVELVVNVDCLRKLEENLKTMGRLSLECSLVDIRPAG 1037
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPVG 63
W+R +++ +VV + +V+++D+G + L I + +P I C L N PVG
Sbjct: 1244 WYRGKVM--EVVGGAVRVQYLDHGFTEKIPQCHLYPILL-YPDIPQFCIPCQLHNTTPVG 1300
Query: 64 TDGEYNIILIVERI 77
+ + I +++++
Sbjct: 1301 NVWQPDAIEVLQQL 1314
>sp|Q9R1R4|TDRD7_RAT Tudor domain-containing protein 7 OS=Rattus norvegicus GN=Tdrd7
PE=1 SV=1
Length = 1113
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 3 GWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPV 62
W RAQI++ D +V +VDYG +E S ++ F SL FQA +C LA + +
Sbjct: 543 AWLRAQIISTD--ENKIKVCYVDYGFCENIEKSKAYRLNPRFCSLSFQATKCKLAGLEIL 600
Query: 63 GTDGEYNIILIVERI 77
D N++ +VE +
Sbjct: 601 NDDP--NLVKVVESL 613
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADF----LSLPFQAIECGLA 57
G W R +I V A V+F+D G +++ S LR+I F L++P QAI+C LA
Sbjct: 731 GKWLRVEITNVHSSRA-LDVQFLDSGNSTSVKVSELREIPPRFLQEMLAIPPQAIKCCLA 789
Query: 58 NI 59
++
Sbjct: 790 DL 791
>sp|Q8NDG6|TDRD9_HUMAN Putative ATP-dependent RNA helicase TDRD9 OS=Homo sapiens GN=TDRD9
PE=2 SV=3
Length = 1382
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVP 61
+FRAQ+L V S +V FVDYG ++ L +I FL LPFQA+E + + P
Sbjct: 963 YFRAQVLYVS--GNSAEVFFVDYGNKSHVDLHLLMEIPCQFLELPFQALEFKICKMRP 1018
>sp|Q99MV7|RNF17_MOUSE RING finger protein 17 OS=Mus musculus GN=Rnf17 PE=1 SV=2
Length = 1640
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 2 GGWFRAQILAVDVVNA-SCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIV 60
G W+RA+I+++ N S V FVDYG L + LRQI + P QAI+ LA
Sbjct: 1510 GLWYRAKIISIKEFNPLSVLVLFVDYGCTEKLTINRLRQIPVQLMQYPAQAIKVLLAGFK 1569
Query: 61 PVGTD 65
P +D
Sbjct: 1570 PPLSD 1574
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVP 61
G W+RA+++ + + +VK+VD+G + +R+I+ +FL P +AI+C LA + P
Sbjct: 765 GIWYRAKVIGLPG-HREVEVKYVDFGNTAKITLKDMRKIKDEFLEPPEKAIKCKLAYVEP 823
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPVG 63
W R QIL + V + +V D G L + LR+++ + ++ ++EC L +I P G
Sbjct: 1002 WRRGQILRM-VTDKLVEVLLYDVGVELVVNIHCLRELQENLKTMGRLSLECSLVDIRPTG 1060
>sp|Q6NU04|TDRD7_XENLA Tudor domain-containing protein 7 OS=Xenopus laevis GN=tdrd7 PE=2
SV=1
Length = 1079
Score = 43.1 bits (100), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 3 GWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANI 59
W RAQI A++ + +V +VDYG T++ + + ++ F +LPFQA +C LA +
Sbjct: 509 AWLRAQISAIE--DKKIKVCYVDYGFSETVDITKVCKLGKPFYTLPFQATKCRLAGL 563
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRA----DFLSLPFQAIECGLA 57
G W R +I V A V F+D G +++ S L++I D +S+P QA++C LA
Sbjct: 697 GKWARVEITNVHSSRA-LDVHFLDSGTIASVKVSELKEIPPPLLRDLISIPPQALKCCLA 755
Query: 58 NI 59
++
Sbjct: 756 DL 757
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANI 59
W+R + + + N V +D+G + + ++ + F+ LPFQAI LA I
Sbjct: 954 WYRVLVKGI-LTNGLVSVYELDHGRHELVSCRKVQPLIEKFMHLPFQAITSQLAGI 1008
>sp|Q8K1H1|TDRD7_MOUSE Tudor domain-containing protein 7 OS=Mus musculus GN=Tdrd7 PE=1
SV=1
Length = 1086
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 3 GWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPV 62
W RAQI++ D +V +VDYG +E S ++ F SL FQA +C LA + +
Sbjct: 516 AWLRAQIISTD--ENKIKVCYVDYGFCENIEKSKAYRLNPRFCSLSFQATKCKLAGLEVL 573
Query: 63 GTD 65
D
Sbjct: 574 NDD 576
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADF----LSLPFQAIECGLA 57
G W R +I V A V+F+D G +++ S LR+I F L++P QAI+C LA
Sbjct: 704 GKWLRVEITNVHSSRA-LDVQFLDSGNSTSVKVSELREIPPRFLQEMLAIPPQAIKCCLA 762
Query: 58 NI 59
++
Sbjct: 763 DL 764
>sp|B8A4F4|TDRD9_DANRE Putative ATP-dependent RNA helicase TDRD9 OS=Danio rerio GN=tdrd9
PE=2 SV=1
Length = 1342
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 1 MGGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIV 60
M ++RA++L ++ ++ +V FVD+G + +S+LR++ +D ++ FQA E +A +
Sbjct: 918 MAKYYRAKVL--HILGSNVEVFFVDFGNTTVVPSSSLRELPSDLMTPAFQAQEFCIARMA 975
Query: 61 P 61
P
Sbjct: 976 P 976
>sp|A6QLE1|TDRD7_BOVIN Tudor domain-containing protein 7 OS=Bos taurus GN=TDRD7 PE=2 SV=1
Length = 1098
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 3 GWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPV 62
W RAQ+++++ +V +VDYG +E S ++ F SL FQA +C LA + +
Sbjct: 528 AWLRAQVISME--EGKIKVCYVDYGFSENVEKSKAYRLNPKFCSLSFQATKCKLAGLEVL 585
Query: 63 GTDGEYNIILIVERI 77
D + ++ +VE +
Sbjct: 586 SDDPD--LVKVVESL 598
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFL----SLPFQAIECGLA 57
G W R +I V A V+F+D G +++ S LR+I FL S+P QAI+C LA
Sbjct: 716 GKWLRVEITNVHSSRA-LDVQFLDAGTVTSVKVSELREIPPRFLQEMISVPPQAIKCCLA 774
Query: 58 NI 59
++
Sbjct: 775 DL 776
>sp|E2RDV1|TDRD7_CANFA Tudor domain-containing protein 7 OS=Canis familiaris GN=TDRD7 PE=3
SV=1
Length = 1125
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 3 GWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPV 62
W RAQI++ + +V +VDYG +E S ++ F SL FQA +C LA + +
Sbjct: 555 AWLRAQIISTE--ENRIKVCYVDYGFSENIEKSKAYKLNPKFCSLSFQATKCKLAGLEVL 612
Query: 63 GTDGEYNIILIVERI 77
D + ++ +VE +
Sbjct: 613 SDDPD--LVKVVESL 625
Score = 38.1 bits (87), Expect = 0.016, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLS----LPFQAIECGLA 57
G W R +I V A V+F+D G +++ S LR+I FL +P QAI+C LA
Sbjct: 743 GKWLRVEITNVHSSRA-LDVQFLDSGTVTSVKVSELREIPPRFLQEIIVIPPQAIKCCLA 801
Query: 58 NI 59
++
Sbjct: 802 DL 803
Score = 29.6 bits (65), Expect = 6.2, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANI 59
W R + + + N V +DYG + + ++ + A F LPFQA+ LA +
Sbjct: 1000 WHRVLLKGI-LTNGLVSVYELDYGKHELVNIRKVQPLAAVFRKLPFQAVTAQLAGV 1054
>sp|D2H0H6|TDRD7_AILME Tudor domain-containing protein 7 OS=Ailuropoda melanoleuca
GN=TDRD7 PE=3 SV=1
Length = 1101
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 3 GWFRAQILAVD--VVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIV 60
W RAQI++ + + AS V +VDYG +E S ++ F SL FQA +C LA +
Sbjct: 528 AWLRAQIISTEENKIKAS-TVCYVDYGFSENIEKSKAYKLNPKFCSLSFQATKCKLAGLE 586
Query: 61 PVGTDGEYNIILIVERI 77
+ D + ++ +VE +
Sbjct: 587 VLSDDPD--LVKVVESL 601
Score = 38.1 bits (87), Expect = 0.016, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLS----LPFQAIECGLA 57
G W R +I V A V+F+D G +++ S LR+I FL +P QAI+C LA
Sbjct: 719 GKWLRVEITNVHSSRA-LDVQFLDSGTVTSVKVSELREIPPRFLQEIIVIPPQAIKCCLA 777
Query: 58 NI 59
++
Sbjct: 778 DL 779
>sp|Q5RAH6|TDRD7_PONAB Tudor domain-containing protein 7 OS=Pongo abelii GN=TDRD7 PE=2
SV=1
Length = 1098
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 3 GWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPV 62
W RAQ+++ + +V +VDYG +E S ++ F SL FQA +C LA + +
Sbjct: 528 AWLRAQVISTE--ENKIKVCYVDYGFSENVEKSKAYKLNPKFCSLSFQATKCKLAGLEVL 585
Query: 63 GTDGEYNIILIVERI 77
D + ++ +VE +
Sbjct: 586 SDDPD--LVKVVESL 598
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFL----SLPFQAIECGLA 57
G W R +I V A V+F+D G +++ S LR+I FL ++P QAI+C LA
Sbjct: 716 GKWLRVEITNVHSSRA-LDVQFLDSGTVTSVKVSELREIPPRFLQEMIAIPPQAIKCCLA 774
Query: 58 NI 59
++
Sbjct: 775 DL 776
>sp|Q8NHU6|TDRD7_HUMAN Tudor domain-containing protein 7 OS=Homo sapiens GN=TDRD7 PE=1
SV=2
Length = 1098
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 3 GWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPV 62
W RAQ+++ + +V +VDYG +E S ++ F SL FQA +C LA + +
Sbjct: 528 AWLRAQVISTE--ENKIKVCYVDYGFSENVEKSKAYKLNPKFCSLSFQATKCKLAGLEVL 585
Query: 63 GTDGEYNIILIVERI 77
D + ++ +VE +
Sbjct: 586 SDDPD--LVKVVESL 598
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFL----SLPFQAIECGLA 57
G W R +I V A V+F+D G +++ S LR+I FL ++P QAI+C LA
Sbjct: 716 GKWLRVEITNVHSSRA-LDVQFLDSGTVTSVKVSELREIPPRFLQEMIAIPPQAIKCCLA 774
Query: 58 NI 59
++
Sbjct: 775 DL 776
>sp|Q5M7P8|TDRD7_XENTR Tudor domain-containing protein 7 OS=Xenopus tropicalis GN=tdrd7
PE=2 SV=1
Length = 1077
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANI 59
W RAQI A++ +V +VDYG ++ + + ++ F +LPFQA +C LA +
Sbjct: 510 WLRAQISAIE--GKKVKVCYVDYGFSEIVDITKVCKLGKQFYTLPFQATKCRLAGL 563
Score = 36.6 bits (83), Expect = 0.046, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRA----DFLSLPFQAIECGLA 57
G W R +I +V A V+F+D G +++ S L++I D +S+P QA+ C LA
Sbjct: 697 GKWARVEITSVHSSRA-LDVQFLDSGTIASVKVSELKEIPPPLLRDLISIPPQALRCCLA 755
Query: 58 NI 59
++
Sbjct: 756 DL 757
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANI 59
W+R + + + N V +DYG + + ++ + F+ LPFQAI LA +
Sbjct: 952 WYRVLVKGI-LTNGLVSVYELDYGRHELVSCRKVQPLIEKFMQLPFQAITSQLAGV 1006
>sp|Q296Q5|SPNE_DROPS Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
pseudoobscura pseudoobscura GN=spn-E PE=3 SV=2
Length = 1433
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 2 GGWFRAQILAVDVVNAS---CQVKFVDYGGYLTLETSALRQIRADFL----SLPFQAIEC 54
G + RA ++ VD N+S V+FVDYG L + LR + D L LP + EC
Sbjct: 950 GKYQRATVVRVDTQNSSNVRFYVRFVDYGDIERLPMTQLRLMSQDLLRHYRDLPPRLFEC 1009
Query: 55 GLANIVPVGTDGEYN 69
LA + P YN
Sbjct: 1010 RLALVQPASMVSTYN 1024
>sp|E7FDW8|TRD7B_DANRE Tudor domain-containing protein 7B OS=Danio rerio GN=tdrd7b PE=2 SV=2
Length = 1085
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPVG 63
W+R + V + N V +DYG + + + LR + +F LPFQAI LA + P
Sbjct: 960 WYRVLVKGV-LTNGLVSVFQLDYGKHELVSGTKLRPLTQEFCQLPFQAITAQLAGLKPRQ 1018
Query: 64 TDGEYNIIL 72
E +I+
Sbjct: 1019 WSEEASIVF 1027
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 6 RAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANI 59
RAQ+ +V+ +V +VD+G + L ++ F LPFQA +C LA +
Sbjct: 515 RAQV--CEVMADKVKVYYVDHGFSEVISIRKLFELNEKFYRLPFQATKCKLAGL 566
>sp|D2H3M0|TDRD5_AILME Tudor domain-containing protein 5 OS=Ailuropoda melanoleuca
GN=TDRD5 PE=3 SV=1
Length = 982
Score = 38.1 bits (87), Expect = 0.014, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPV 62
W+R I V + +V + D+G T++ S+LR ++ + LP QAI C LA + PV
Sbjct: 544 WYRVIIHRV-LGKQEVEVFYPDFGNIGTVQKSSLRFLKCCYTKLPAQAIPCSLAWVRPV 601
>sp|E1BPH3|TDRD5_BOVIN Tudor domain-containing protein 5 OS=Bos taurus GN=TDRD5 PE=3 SV=1
Length = 975
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPV 62
W+R I + + +V + D+G T++ S+LR ++ + LP QAI C LA + PV
Sbjct: 546 WYRVIIHRI-LGKQEVEVFYPDFGNIGTVQKSSLRFLKCCYTKLPAQAIPCSLAWVRPV 603
>sp|B4GEU5|SPNE_DROPE Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
persimilis GN=spn-E PE=3 SV=1
Length = 1434
Score = 37.4 bits (85), Expect = 0.025, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Query: 2 GGWFRAQILAVDVV---NASCQVKFVDYGGYLTLETSALRQIRADFL----SLPFQAIEC 54
G + RA ++ VD N V+FVDYG L + LR + D L LP + EC
Sbjct: 951 GKYQRATVVRVDTQDSRNVRFYVRFVDYGDIERLPMAQLRLMSQDLLRHYRDLPPRLFEC 1010
Query: 55 GLANIVPVGTDGEYN 69
LA + P YN
Sbjct: 1011 RLALVQPASMVSTYN 1025
>sp|O60522|TDRD6_HUMAN Tudor domain-containing protein 6 OS=Homo sapiens GN=TDRD6 PE=2
SV=2
Length = 2096
Score = 37.4 bits (85), Expect = 0.026, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIV-PV 62
W RA I + V V FVDYG + + I +FL + QA C L N++ PV
Sbjct: 833 WSRALISGIQSVE-HVNVTFVDYGDREMVSVKNIYSISEEFLKVKAQAFRCSLYNLIQPV 891
Query: 63 GTD 65
G +
Sbjct: 892 GQN 894
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 3 GWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPV 62
G++RA + +D + S V VD G ++ +R + F LP A++C LA+I P+
Sbjct: 551 GYYRAIVTKLD--DKSVDVFLVDRGNSENVDWYDVRMLLPQFRQLPILAVKCTLADIWPL 608
Query: 63 G 63
G
Sbjct: 609 G 609
Score = 33.5 bits (75), Expect = 0.44, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGL 56
G W+RA +L QV VDYG + S+LR + ++ +P C L
Sbjct: 324 GHWYRALLLETFRPQRCAQVLHVDYGRKELVSCSSLRYLLPEYFRMPVVTYPCAL 378
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRAD---FLSLPFQAIECGLAN 58
G W+R ++ + +V FVD+G + + L I +D L LP QA+ C L++
Sbjct: 1047 GNWYRGIVIEKE----PKKVFFVDFGNIYVVTSDDLLPIPSDAYDVLLLPMQAVRCSLSD 1102
Query: 59 I 59
I
Sbjct: 1103 I 1103
Score = 32.3 bits (72), Expect = 0.93, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPVG 63
W R ++++ + +V +D G +T +L R +F +LP + + C LA +VP G
Sbjct: 81 WHRCRVVSRQAQES--RVFLLDEGRTITAGAGSLAPGRREFFNLPSEVLGCVLAGLVPAG 138
>sp|E2QTD3|TDRD5_CANFA Tudor domain-containing protein 5 OS=Canis familiaris GN=TDRD5 PE=3
SV=1
Length = 985
Score = 37.4 bits (85), Expect = 0.027, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPV 62
W+R I V + +V + D+G T++ S+LR ++ + LP QAI C LA + PV
Sbjct: 547 WYRVIIHRV-LGKQEVEVFYPDFGNIGTVQKSSLRFLKWCYTKLPAQAIPCSLAWVRPV 604
>sp|Q1L981|TDRD5_DANRE Tudor domain-containing protein 5 OS=Danio rerio GN=tdrd5 PE=2 SV=1
Length = 905
Score = 37.4 bits (85), Expect = 0.027, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPV 62
WF ++ +V +VDYG +E +LR ++A + LP QA+ LA + P+
Sbjct: 538 WFYRVVIHEVFSETEVKVYYVDYGDITKVERHSLRFLKACYADLPAQAVPAMLAGVRPI 596
>sp|B4K5R2|SPNE_DROMO Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
mojavensis GN=spn-E PE=3 SV=1
Length = 1431
Score = 37.4 bits (85), Expect = 0.028, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 6 RAQILAVDV-VNA--SCQVKFVDYGGYLTLETSALR----QIRADFLSLPFQAIECGLAN 58
RA +L V+ +N +V+F+DYG + LR Q++ DF LP + EC LA
Sbjct: 956 RAVVLKVETQINGYPRFRVRFIDYGDVAVVPIDKLRLMSPQLKRDFERLPPRMFECRLAL 1015
Query: 59 IVPVGTDGEYN 69
+ P YN
Sbjct: 1016 VQPSSVASSYN 1026
>sp|E1C3S7|TDRD7_CHICK Tudor domain-containing protein 7 OS=Gallus gallus GN=TDRD7 PE=2
SV=1
Length = 1071
Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFL----SLPFQAIECGLA 57
G W R +I + A V+F+D G ++ + LR+I + FL +P QAI+C LA
Sbjct: 702 GKWTRVEITIIHSRRA-LGVRFIDTGRVAYVKVTDLREIPSQFLREVIKIPPQAIKCCLA 760
Query: 58 NIVP 61
++ P
Sbjct: 761 DLPP 764
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPVG 63
W+R + + + V +DYG + + ++ + F LPFQAI+ LA +
Sbjct: 946 WYRVIVKGI-LRKGFLSVYVLDYGKHEVISIDKVQPLLDKFRKLPFQAIKAELAGVKSQQ 1004
Query: 64 TDGEYNIIL 72
E +II
Sbjct: 1005 WSEEASIIF 1013
>sp|P61407|TDRD6_MOUSE Tudor domain-containing protein 6 OS=Mus musculus GN=Tdrd6 PE=1
SV=1
Length = 2134
Score = 37.0 bits (84), Expect = 0.033, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 3 GWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPV 62
G++RA + +D + S V VD G ++ +R + F LP A++C LA+I P+
Sbjct: 557 GYYRATVTRLD--SKSVDVFLVDRGNSENVDWCDVRMLLPQFRQLPILALKCTLADIWPL 614
Query: 63 G 63
G
Sbjct: 615 G 615
Score = 33.5 bits (75), Expect = 0.41, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGL 56
G W+RA +L QV VDYG + S+LR + ++ +P C L
Sbjct: 323 GQWYRALLLETFRPQRCAQVLHVDYGRKELVSCSSLRYLLPEYFRMPVVTYPCAL 377
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIV- 60
G W RA I + +V FVDYG + T + + F + QA C L N++
Sbjct: 835 GRWSRALISGAHSLE-HVRVVFVDYGDRDVVSTKDILSVSDVFFQVRAQAFRCSLYNLIQ 893
Query: 61 PVGTD 65
P+G +
Sbjct: 894 PMGEN 898
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 2 GGWFRAQILAVDVVNASCQVKFVDYGG-YLTLE-TSALRQIRADFLSLPFQAIECGLANI 59
G W+R I+ + +V FVD+G Y+ ++ + + D L LP QA++C L++I
Sbjct: 1052 GNWYRGIIIEKE----PSKVFFVDFGNTYIAVDHLLPIPRDAHDVLLLPMQALKCSLSDI 1107
>sp|Q8NAT2|TDRD5_HUMAN Tudor domain-containing protein 5 OS=Homo sapiens GN=TDRD5 PE=1
SV=3
Length = 981
Score = 36.2 bits (82), Expect = 0.054, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVPV 62
W+R I V + +V + D+G ++ S+LR ++ + LP QAI C LA + PV
Sbjct: 542 WYRVIIHRV-LEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAIPCSLAWVRPV 599
>sp|B4NBB0|SPNE_DROWI Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
willistoni GN=spn-E PE=3 SV=1
Length = 1432
Score = 36.2 bits (82), Expect = 0.056, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 6 RAQILAVDVVN---ASCQVKFVDYGGYLTLETSALR----QIRADFLSLPFQAIECGLAN 58
RAQ++ V+ + +V+F+DYG + LR Q++ ++ LP + EC LA
Sbjct: 955 RAQVIRVETHSHQYPKFRVRFIDYGDIAVVPMDQLRFMSNQLKREYDDLPPRCFECRLAL 1014
Query: 59 IVPVGTDGEYN 69
+ P YN
Sbjct: 1015 VQPAALTSNYN 1025
>sp|B4LX81|SPNE_DROVI Probable ATP-dependent RNA helicase spindle-E OS=Drosophila virilis
GN=spn-E PE=3 SV=1
Length = 1433
Score = 36.2 bits (82), Expect = 0.056, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 20 QVKFVDYGGYLTLETSALR----QIRADFLSLPFQAIECGLANIVPVGTDGEYN 69
+V+F+DYG L LR +++ DF LP + EC LA + P YN
Sbjct: 973 RVRFIDYGDMAVLPMDQLRLMPHELKRDFDQLPPRMFECRLALVQPSMVTSSYN 1026
>sp|B4F7C4|TDRD5_RAT Tudor domain-containing protein 5 OS=Rattus norvegicus GN=Tdrd5
PE=2 SV=1
Length = 995
Score = 36.2 bits (82), Expect = 0.061, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVP 61
W+R I + + +V + D+G T++ S+LR ++ + LP QAI C LA + P
Sbjct: 550 WYRVIIHRI-LGKKEVEVFYPDFGNIGTVQKSSLRFLKCCYTKLPAQAIPCSLAWVRP 606
>sp|Q5VCS6|TDRD5_MOUSE Tudor domain-containing protein 5 OS=Mus musculus GN=Tdrd5 PE=1
SV=3
Length = 1040
Score = 36.2 bits (82), Expect = 0.061, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGLANIVP 61
W+R I + + +V + D+G T++ S+LR ++ + LP QAI C LA + P
Sbjct: 550 WYRVIIHRI-LGKKEVEVFYPDFGNIGTVQKSSLRFLKCCYTKLPAQAIPCSLAWVRP 606
>sp|P25823|TUD_DROME Maternal protein tudor OS=Drosophila melanogaster GN=tud PE=1 SV=2
Length = 2515
Score = 35.4 bits (80), Expect = 0.091, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRADFLSLPFQAIECGL 56
W+RA+IL VD S V+ VD+G ++ + I L +P QAI+C L
Sbjct: 656 WYRAEILRVD---DSVIVRHVDFGYEQNVKRHLIGHIAEKHLEMPRQAIKCCL 705
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 2 GGWFRAQILAVDVVNASC-QVKFVDYGGYLTLETSALRQIRADF 44
G W+RA+I D NA+C +V ++DYG ++ ++ + A F
Sbjct: 1369 GNWYRARISGKD-SNAACFEVFYIDYGNTEEIKRDDIKALDAKF 1411
>sp|B4JT42|SPNE_DROGR Probable ATP-dependent RNA helicase spindle-E OS=Drosophila grimshawi
GN=spn-E PE=3 SV=1
Length = 1434
Score = 33.9 bits (76), Expect = 0.28, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 6 RAQILAVD-VVNASCQ--VKFVDYGGYLTLETSALR----QIRADFLSLPFQAIECGLAN 58
RA +L V+ NA Q V+F+DYG + L LR ++R D LP + EC LA
Sbjct: 957 RAVVLKVEPQSNAIPQFLVRFIDYGDWALLAMDQLRLMRHELRRDLEELPPRMFECRLAL 1016
Query: 59 IVP 61
+ P
Sbjct: 1017 VQP 1019
>sp|Q5ZMS6|TDRD3_CHICK Tudor domain-containing protein 3 OS=Gallus gallus GN=TDRD3 PE=2
SV=1
Length = 741
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRAD 43
++RA++ A+ + VKF DYG Y + S +R I AD
Sbjct: 661 FYRAEVEALHSSGMTAVVKFSDYGNYEEVLLSNIRPIHAD 700
>sp|Q2HJG4|TDRD3_BOVIN Tudor domain-containing protein 3 OS=Bos taurus GN=TDRD3 PE=2 SV=1
Length = 722
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 25/40 (62%)
Query: 4 WFRAQILAVDVVNASCQVKFVDYGGYLTLETSALRQIRAD 43
++RA++ A+ + VKF+DYG Y + S +R I+++
Sbjct: 643 FYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIRPIQSE 682
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.144 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,602,719
Number of Sequences: 539616
Number of extensions: 914207
Number of successful extensions: 2583
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2481
Number of HSP's gapped (non-prelim): 100
length of query: 80
length of database: 191,569,459
effective HSP length: 51
effective length of query: 29
effective length of database: 164,049,043
effective search space: 4757422247
effective search space used: 4757422247
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)