BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13438
(154 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|312377227|gb|EFR24111.1| hypothetical protein AND_11537 [Anopheles darlingi]
Length = 1614
Score = 241 bits (614), Expect = 9e-62, Method: Composition-based stats.
Identities = 105/150 (70%), Positives = 123/150 (82%), Gaps = 3/150 (2%)
Query: 7 KSMIIEIELFHPTIFTSGIC---IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLK 63
KS ++I P++ + G+ IGVWKSW+++ LDI+DI WPGNSHTPPQGVPEKFHLK
Sbjct: 1441 KSAELKIMNLRPSVNSKGLVWEEIGVWKSWQQQKLDIRDIAWPGNSHTPPQGVPEKFHLK 1500
Query: 64 ITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFC 123
ITFLEEAPYI +SP DP++GKC M+RGV+CRVA D +M ID+ AH N SFYQCCSGFC
Sbjct: 1501 ITFLEEAPYINLSPADPISGKCLMDRGVLCRVAADHEMTDIDMGQAHKNGSFYQCCSGFC 1560
Query: 124 IDLLGKFAEELGFTYELVRVEDGKWGTQED 153
IDLL KFAEELGFTYELVRVEDGKWGT E+
Sbjct: 1561 IDLLEKFAEELGFTYELVRVEDGKWGTLEN 1590
>gi|270004449|gb|EFA00897.1| hypothetical protein TcasGA2_TC003802 [Tribolium castaneum]
Length = 1000
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 103/127 (81%), Positives = 117/127 (92%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVWKSW+KEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEE PYI ++PPDPVTGKC+
Sbjct: 396 IGVWKSWQKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEPPYISLAPPDPVTGKCS 455
Query: 87 MNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDG 146
M+RGV+CR+A DAD+ ++D +AH N SFYQCCSGFCIDLL KF+EELGFTYELVRVEDG
Sbjct: 456 MDRGVLCRIASDADITEVDTTLAHRNGSFYQCCSGFCIDLLQKFSEELGFTYELVRVEDG 515
Query: 147 KWGTQED 153
+WGT E+
Sbjct: 516 RWGTNEN 522
>gi|189235687|ref|XP_971730.2| PREDICTED: similar to glutamate receptor, ionotropic, n-methyl
d-aspartate epsilon (nmda epsilon) [Tribolium castaneum]
Length = 962
Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 103/127 (81%), Positives = 117/127 (92%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVWKSW+KEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEE PYI ++PPDPVTGKC+
Sbjct: 396 IGVWKSWQKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEPPYISLAPPDPVTGKCS 455
Query: 87 MNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDG 146
M+RGV+CR+A DAD+ ++D +AH N SFYQCCSGFCIDLL KF+EELGFTYELVRVEDG
Sbjct: 456 MDRGVLCRIASDADITEVDTTLAHRNGSFYQCCSGFCIDLLQKFSEELGFTYELVRVEDG 515
Query: 147 KWGTQED 153
+WGT E+
Sbjct: 516 RWGTNEN 522
>gi|198470904|ref|XP_001355429.2| GA13251 [Drosophila pseudoobscura pseudoobscura]
gi|198145675|gb|EAL32487.2| GA13251 [Drosophila pseudoobscura pseudoobscura]
Length = 1105
Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 103/128 (80%), Positives = 111/128 (86%), Gaps = 1/128 (0%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVWKSWE + LDI+DI WPGNSH PPQGVPEKFHLKITFLEEAPYI +SP DPV+GKC
Sbjct: 492 IGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKFHLKITFLEEAPYINLSPADPVSGKCL 551
Query: 87 MNRGVICRVAGDADM-DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVED 145
M+RGV+CRVA D +M IDV AH NESFYQCCSGFCIDLL KFAEELGFTYELVRVED
Sbjct: 552 MDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGFCIDLLEKFAEELGFTYELVRVED 611
Query: 146 GKWGTQED 153
GKWGT E+
Sbjct: 612 GKWGTLEN 619
>gi|195469758|ref|XP_002099803.1| GE16522 [Drosophila yakuba]
gi|194187327|gb|EDX00911.1| GE16522 [Drosophila yakuba]
Length = 1089
Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 103/128 (80%), Positives = 111/128 (86%), Gaps = 1/128 (0%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVWKSWE + LDI+DI WPGNSH PPQGVPEKFHLKITFLEEAPYI +SP DPV+GKC
Sbjct: 476 IGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKFHLKITFLEEAPYINLSPADPVSGKCL 535
Query: 87 MNRGVICRVAGDADM-DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVED 145
M+RGV+CRVA D +M IDV AH NESFYQCCSGFCIDLL KFAEELGFTYELVRVED
Sbjct: 536 MDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGFCIDLLEKFAEELGFTYELVRVED 595
Query: 146 GKWGTQED 153
GKWGT E+
Sbjct: 596 GKWGTLEN 603
>gi|195457349|ref|XP_002075535.1| GK14575 [Drosophila willistoni]
gi|194171620|gb|EDW86521.1| GK14575 [Drosophila willistoni]
Length = 1087
Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 103/128 (80%), Positives = 111/128 (86%), Gaps = 1/128 (0%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVWKSWE + LDI+DI WPGNSH PPQGVPEKFHLKITFLEEAPYI +SP DPV+GKC
Sbjct: 474 IGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKFHLKITFLEEAPYINLSPADPVSGKCL 533
Query: 87 MNRGVICRVAGDADM-DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVED 145
M+RGV+CRVA D +M IDV AH NESFYQCCSGFCIDLL KFAEELGFTYELVRVED
Sbjct: 534 MDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGFCIDLLEKFAEELGFTYELVRVED 593
Query: 146 GKWGTQED 153
GKWGT E+
Sbjct: 594 GKWGTLEN 601
>gi|194763914|ref|XP_001964077.1| GF21362 [Drosophila ananassae]
gi|190619002|gb|EDV34526.1| GF21362 [Drosophila ananassae]
Length = 1089
Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 103/128 (80%), Positives = 111/128 (86%), Gaps = 1/128 (0%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVWKSWE + LDI+DI WPGNSH PPQGVPEKFHLKITFLEEAPYI +SP DPV+GKC
Sbjct: 476 IGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKFHLKITFLEEAPYINLSPADPVSGKCL 535
Query: 87 MNRGVICRVAGDADM-DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVED 145
M+RGV+CRVA D +M IDV AH NESFYQCCSGFCIDLL KFAEELGFTYELVRVED
Sbjct: 536 MDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGFCIDLLEKFAEELGFTYELVRVED 595
Query: 146 GKWGTQED 153
GKWGT E+
Sbjct: 596 GKWGTLEN 603
>gi|158293107|ref|XP_314428.4| Anopheles gambiae str. PEST AGAP012429-PA [Anopheles gambiae str.
PEST]
gi|157016876|gb|EAA44457.4| AGAP012429-PA [Anopheles gambiae str. PEST]
Length = 935
Score = 231 bits (589), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 105/150 (70%), Positives = 123/150 (82%), Gaps = 3/150 (2%)
Query: 7 KSMIIEIELFHPTIFTSGIC---IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLK 63
KS ++I P++ + G+ IG+WKSW+++ LDI+DI WPGNSHTPPQGVPEKFHLK
Sbjct: 290 KSAELKIMNLRPSVNSKGLVWEEIGIWKSWQQQKLDIRDIAWPGNSHTPPQGVPEKFHLK 349
Query: 64 ITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFC 123
ITFLEEAPYI +SP DPV+GKC M+RGV+CRVA D +M ID+ AH N SFYQCCSGFC
Sbjct: 350 ITFLEEAPYINLSPADPVSGKCLMDRGVLCRVAADHEMTDIDMGQAHKNGSFYQCCSGFC 409
Query: 124 IDLLGKFAEELGFTYELVRVEDGKWGTQED 153
IDLL KFAEELGFTYELVRVEDGKWGT E+
Sbjct: 410 IDLLEKFAEELGFTYELVRVEDGKWGTLEN 439
>gi|157117890|ref|XP_001653086.1| glutamate receptor, ionotropic, n-methyl d-aspartate epsilon (nmda
epsilon) [Aedes aegypti]
gi|108875927|gb|EAT40152.1| AAEL008090-PA [Aedes aegypti]
Length = 1051
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 103/146 (70%), Positives = 121/146 (82%), Gaps = 3/146 (2%)
Query: 11 IEIELFHPTIFTSGIC---IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFL 67
++I P++ + G+ IG+WKSW+++ LDI+DI WPGNSHTPPQGVPEKFHLKITFL
Sbjct: 417 LKIMNLRPSVNSKGLVWEEIGMWKSWQQQKLDIRDIAWPGNSHTPPQGVPEKFHLKITFL 476
Query: 68 EEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLL 127
EEAPYI +SP DPV+GKC M+RGV+CRVA D +M ID+ AH N SFYQCCSGFCIDLL
Sbjct: 477 EEAPYINLSPADPVSGKCLMDRGVLCRVAADHEMTDIDMGQAHKNGSFYQCCSGFCIDLL 536
Query: 128 GKFAEELGFTYELVRVEDGKWGTQED 153
KFAEELGFTYELVRVEDGKWGT E+
Sbjct: 537 EKFAEELGFTYELVRVEDGKWGTLEN 562
>gi|340716966|ref|XP_003396961.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2-like [Bombus
terrestris]
Length = 1122
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 102/127 (80%), Positives = 115/127 (90%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVWKSW+KEGLDIKDIVWPG +HTPPQGVPEKF+LKITFLEE PYI ++PPDPVTGKC
Sbjct: 466 IGVWKSWKKEGLDIKDIVWPGKTHTPPQGVPEKFYLKITFLEEPPYINLAPPDPVTGKCL 525
Query: 87 MNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDG 146
++RGV CRVA D+DMD++DV A NESFYQCCSGFCIDLL KF+EE+GFTYELVRVEDG
Sbjct: 526 VDRGVHCRVAKDSDMDEMDVQAAQKNESFYQCCSGFCIDLLQKFSEEIGFTYELVRVEDG 585
Query: 147 KWGTQED 153
KWGT E+
Sbjct: 586 KWGTLEN 592
>gi|350408771|ref|XP_003488508.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2-like [Bombus
impatiens]
Length = 1122
Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 102/127 (80%), Positives = 115/127 (90%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVWKSW+KEGLDIKDIVWPG +HTPPQGVPEKF+LKITFLEE PYI ++PPDPVTGKC
Sbjct: 466 IGVWKSWKKEGLDIKDIVWPGKTHTPPQGVPEKFYLKITFLEEPPYINLAPPDPVTGKCL 525
Query: 87 MNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDG 146
++RGV CRVA D+DMD++DV A NESFYQCCSGFCIDLL KF+EE+GFTYELVRVEDG
Sbjct: 526 VDRGVHCRVAKDSDMDEMDVQAAQKNESFYQCCSGFCIDLLQKFSEEIGFTYELVRVEDG 585
Query: 147 KWGTQED 153
KWGT E+
Sbjct: 586 KWGTLEN 592
>gi|157136930|ref|XP_001663867.1| glutamate receptor, ionotropic, n-methyl d-aspartate epsilon (nmda
epsilon) [Aedes aegypti]
gi|108869818|gb|EAT34043.1| AAEL013695-PA, partial [Aedes aegypti]
Length = 986
Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 103/146 (70%), Positives = 121/146 (82%), Gaps = 3/146 (2%)
Query: 11 IEIELFHPTIFTSGIC---IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFL 67
++I P++ + G+ IG+WKSW+++ LDI+DI WPGNSHTPPQGVPEKFHLKITFL
Sbjct: 352 LKIMNLRPSVNSKGLVWEEIGMWKSWQQQKLDIRDIAWPGNSHTPPQGVPEKFHLKITFL 411
Query: 68 EEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLL 127
EEAPYI +SP DPV+GKC M+RGV+CRVA D +M ID+ AH N SFYQCCSGFCIDLL
Sbjct: 412 EEAPYINLSPADPVSGKCLMDRGVLCRVAADHEMTDIDMGQAHKNGSFYQCCSGFCIDLL 471
Query: 128 GKFAEELGFTYELVRVEDGKWGTQED 153
KFAEELGFTYELVRVEDGKWGT E+
Sbjct: 472 EKFAEELGFTYELVRVEDGKWGTLEN 497
>gi|170059461|ref|XP_001865374.1| glutamate receptor [Culex quinquefasciatus]
gi|167878240|gb|EDS41623.1| glutamate receptor [Culex quinquefasciatus]
Length = 1055
Score = 228 bits (581), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 103/146 (70%), Positives = 121/146 (82%), Gaps = 3/146 (2%)
Query: 11 IEIELFHPTIFTSGIC---IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFL 67
++I P++ + G+ IG+WKSW+++ LDI+DI WPGNSHTPPQGVPEKFHLKITFL
Sbjct: 421 LKIMNLRPSVNSKGLVWEEIGMWKSWQQQKLDIRDIAWPGNSHTPPQGVPEKFHLKITFL 480
Query: 68 EEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLL 127
EEAPYI +SP DPV+GKC M+RGV+CRVA D +M ID+ AH N SFYQCCSGFCIDLL
Sbjct: 481 EEAPYINLSPADPVSGKCLMDRGVLCRVAADHEMTDIDMGQAHKNGSFYQCCSGFCIDLL 540
Query: 128 GKFAEELGFTYELVRVEDGKWGTQED 153
KFAEELGFTYELVRVEDGKWGT E+
Sbjct: 541 EKFAEELGFTYELVRVEDGKWGTLEN 566
>gi|62473388|ref|NP_001014714.1| NMDA receptor 2, isoform C [Drosophila melanogaster]
gi|48095783|gb|AAT40461.1| NMDA receptor subunit 2-2 [Drosophila melanogaster]
gi|61677865|gb|AAF45640.2| NMDA receptor 2, isoform C [Drosophila melanogaster]
Length = 1083
Score = 228 bits (580), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 103/128 (80%), Positives = 111/128 (86%), Gaps = 1/128 (0%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVWKSWE + LDI+DI WPGNSH PPQGVPEKFHLKITFLEEAPYI +SP DPV+GKC
Sbjct: 470 IGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKFHLKITFLEEAPYINLSPADPVSGKCL 529
Query: 87 MNRGVICRVAGDADMDK-IDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVED 145
M+RGV+CRVA D +M IDV AH NESFYQCCSGFCIDLL KFAEELGFTYELVRVED
Sbjct: 530 MDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGFCIDLLEKFAEELGFTYELVRVED 589
Query: 146 GKWGTQED 153
GKWGT E+
Sbjct: 590 GKWGTLEN 597
>gi|194912520|ref|XP_001982521.1| GG12692 [Drosophila erecta]
gi|190648197|gb|EDV45490.1| GG12692 [Drosophila erecta]
Length = 1083
Score = 228 bits (580), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 103/128 (80%), Positives = 111/128 (86%), Gaps = 1/128 (0%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVWKSWE + LDI+DI WPGNSH PPQGVPEKFHLKITFLEEAPYI +SP DPV+GKC
Sbjct: 470 IGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKFHLKITFLEEAPYINLSPADPVSGKCL 529
Query: 87 MNRGVICRVAGDADMDK-IDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVED 145
M+RGV+CRVA D +M IDV AH NESFYQCCSGFCIDLL KFAEELGFTYELVRVED
Sbjct: 530 MDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGFCIDLLEKFAEELGFTYELVRVED 589
Query: 146 GKWGTQED 153
GKWGT E+
Sbjct: 590 GKWGTLEN 597
>gi|195162171|ref|XP_002021929.1| GL14372 [Drosophila persimilis]
gi|194103827|gb|EDW25870.1| GL14372 [Drosophila persimilis]
Length = 1109
Score = 228 bits (580), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 107/151 (70%), Positives = 119/151 (78%), Gaps = 4/151 (2%)
Query: 7 KSMIIEIELFHPTIFTSGIC---IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLK 63
KS ++I P+ + IGVWKSWE + LDI+DI WPGNSH PPQGVPEKFHLK
Sbjct: 473 KSAELKIMNLRPSANNKNLVWEEIGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKFHLK 532
Query: 64 ITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDK-IDVAMAHHNESFYQCCSGF 122
ITFLEEAPYI +SP DPV+GKC M+RGV+CRVA D +M IDV AH NESFYQCCSGF
Sbjct: 533 ITFLEEAPYINLSPADPVSGKCLMDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGF 592
Query: 123 CIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
CIDLL KFAEELGFTYELVRVEDGKWGT E+
Sbjct: 593 CIDLLEKFAEELGFTYELVRVEDGKWGTLEN 623
>gi|195133877|ref|XP_002011365.1| GI16039 [Drosophila mojavensis]
gi|193907340|gb|EDW06207.1| GI16039 [Drosophila mojavensis]
Length = 1145
Score = 228 bits (580), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 107/151 (70%), Positives = 119/151 (78%), Gaps = 4/151 (2%)
Query: 7 KSMIIEIELFHPTIFTSGIC---IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLK 63
KS ++I P+ + IGVWKSWE + LDI+DI WPGNSH PPQGVPEKFHLK
Sbjct: 509 KSAELKIMNLRPSANNKNLVWEEIGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKFHLK 568
Query: 64 ITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDK-IDVAMAHHNESFYQCCSGF 122
ITFLEEAPYI +SP DPV+GKC M+RGV+CRVA D +M IDV AH NESFYQCCSGF
Sbjct: 569 ITFLEEAPYINLSPADPVSGKCLMDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGF 628
Query: 123 CIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
CIDLL KFAEELGFTYELVRVEDGKWGT E+
Sbjct: 629 CIDLLEKFAEELGFTYELVRVEDGKWGTLEN 659
>gi|281359680|ref|NP_001162637.1| NMDA receptor 2, isoform F [Drosophila melanogaster]
gi|48095785|gb|AAT40462.1| NMDA receptor subunit 2-3 [Drosophila melanogaster]
gi|272505930|gb|ACZ95174.1| NMDA receptor 2, isoform F [Drosophila melanogaster]
Length = 1070
Score = 228 bits (580), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 103/128 (80%), Positives = 111/128 (86%), Gaps = 1/128 (0%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVWKSWE + LDI+DI WPGNSH PPQGVPEKFHLKITFLEEAPYI +SP DPV+GKC
Sbjct: 470 IGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKFHLKITFLEEAPYINLSPADPVSGKCL 529
Query: 87 MNRGVICRVAGDADMDK-IDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVED 145
M+RGV+CRVA D +M IDV AH NESFYQCCSGFCIDLL KFAEELGFTYELVRVED
Sbjct: 530 MDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGFCIDLLEKFAEELGFTYELVRVED 589
Query: 146 GKWGTQED 153
GKWGT E+
Sbjct: 590 GKWGTLEN 597
>gi|195347655|ref|XP_002040367.1| GM18968 [Drosophila sechellia]
gi|194121795|gb|EDW43838.1| GM18968 [Drosophila sechellia]
Length = 1085
Score = 228 bits (580), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 103/128 (80%), Positives = 111/128 (86%), Gaps = 1/128 (0%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVWKSWE + LDI+DI WPGNSH PPQGVPEKFHLKITFLEEAPYI +SP DPV+GKC
Sbjct: 472 IGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKFHLKITFLEEAPYINLSPADPVSGKCL 531
Query: 87 MNRGVICRVAGDADMDK-IDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVED 145
M+RGV+CRVA D +M IDV AH NESFYQCCSGFCIDLL KFAEELGFTYELVRVED
Sbjct: 532 MDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGFCIDLLEKFAEELGFTYELVRVED 591
Query: 146 GKWGTQED 153
GKWGT E+
Sbjct: 592 GKWGTLEN 599
>gi|195060385|ref|XP_001995793.1| GH17573 [Drosophila grimshawi]
gi|193896579|gb|EDV95445.1| GH17573 [Drosophila grimshawi]
Length = 1013
Score = 228 bits (580), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 107/151 (70%), Positives = 119/151 (78%), Gaps = 4/151 (2%)
Query: 7 KSMIIEIELFHPTIFTSGIC---IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLK 63
KS ++I P+ + IGVWKSWE + LDI+DI WPGNSH PPQGVPEKFHLK
Sbjct: 377 KSAELKIMNLRPSANNKNLVWEEIGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKFHLK 436
Query: 64 ITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDK-IDVAMAHHNESFYQCCSGF 122
ITFLEEAPYI +SP DPV+GKC M+RGV+CRVA D +M IDV AH NESFYQCCSGF
Sbjct: 437 ITFLEEAPYINLSPADPVSGKCLMDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGF 496
Query: 123 CIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
CIDLL KFAEELGFTYELVRVEDGKWGT E+
Sbjct: 497 CIDLLEKFAEELGFTYELVRVEDGKWGTLEN 527
>gi|62473398|ref|NP_001014715.1| NMDA receptor 2, isoform B [Drosophila melanogaster]
gi|62473410|ref|NP_001014716.1| NMDA receptor 2, isoform A [Drosophila melanogaster]
gi|281359676|ref|NP_001162635.1| NMDA receptor 2, isoform D [Drosophila melanogaster]
gi|22651397|gb|AAL12478.1| glutamate NMDA receptor subunit variant NR2-a [Drosophila
melanogaster]
gi|22651399|gb|AAL12479.1| glutamate NMDA receptor subunit variant NR2-b [Drosophila
melanogaster]
gi|45446773|gb|AAN09051.2| NMDA receptor 2, isoform A [Drosophila melanogaster]
gi|45446774|gb|AAF45639.3| NMDA receptor 2, isoform B [Drosophila melanogaster]
gi|48095775|gb|AAT40457.1| NMDA receptor subunit 2-1c [Drosophila melanogaster]
gi|48095777|gb|AAT40458.1| NMDA receptor subunit 2-1d [Drosophila melanogaster]
gi|48095779|gb|AAT40459.1| NMDA receptor subunit 2-1e [Drosophila melanogaster]
gi|48095781|gb|AAT40460.1| NMDA receptor subunit 2-1f [Drosophila melanogaster]
gi|272505928|gb|ACZ95172.1| NMDA receptor 2, isoform D [Drosophila melanogaster]
Length = 902
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 103/128 (80%), Positives = 111/128 (86%), Gaps = 1/128 (0%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVWKSWE + LDI+DI WPGNSH PPQGVPEKFHLKITFLEEAPYI +SP DPV+GKC
Sbjct: 289 IGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKFHLKITFLEEAPYINLSPADPVSGKCL 348
Query: 87 MNRGVICRVAGDADMDK-IDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVED 145
M+RGV+CRVA D +M IDV AH NESFYQCCSGFCIDLL KFAEELGFTYELVRVED
Sbjct: 349 MDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGFCIDLLEKFAEELGFTYELVRVED 408
Query: 146 GKWGTQED 153
GKWGT E+
Sbjct: 409 GKWGTLEN 416
>gi|195399453|ref|XP_002058334.1| GJ15548 [Drosophila virilis]
gi|194150758|gb|EDW66442.1| GJ15548 [Drosophila virilis]
Length = 954
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/151 (70%), Positives = 119/151 (78%), Gaps = 4/151 (2%)
Query: 7 KSMIIEIELFHPTIFTSGIC---IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLK 63
KS ++I P+ + IGVWKSWE + LDI+DI WPGNSH PPQGVPEKFHLK
Sbjct: 318 KSAELKIMNLRPSANNKNLVWEEIGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKFHLK 377
Query: 64 ITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDK-IDVAMAHHNESFYQCCSGF 122
ITFLEEAPYI +SP DPV+GKC M+RGV+CRVA D +M IDV AH NESFYQCCSGF
Sbjct: 378 ITFLEEAPYINLSPADPVSGKCLMDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGF 437
Query: 123 CIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
CIDLL KFAEELGFTYELVRVEDGKWGT E+
Sbjct: 438 CIDLLEKFAEELGFTYELVRVEDGKWGTLEN 468
>gi|383853005|ref|XP_003702015.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2-like
[Megachile rotundata]
Length = 1072
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 114/127 (89%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVWKSWEKEGLDIKDIVWPGN+HTPPQGVPEKF+LKITFLEE PYI ++PPDPV+GKC
Sbjct: 416 IGVWKSWEKEGLDIKDIVWPGNTHTPPQGVPEKFYLKITFLEEPPYINLAPPDPVSGKCL 475
Query: 87 MNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDG 146
M+RGV CRVA ++DM +D+ A NESFYQCCSGFCIDLL KF+EE+GFTYELVRVEDG
Sbjct: 476 MDRGVHCRVAKESDMVGVDIQSAQKNESFYQCCSGFCIDLLQKFSEEIGFTYELVRVEDG 535
Query: 147 KWGTQED 153
KWGT E+
Sbjct: 536 KWGTLEN 542
>gi|281359678|ref|NP_001162636.1| NMDA receptor 2, isoform E [Drosophila melanogaster]
gi|272505929|gb|ACZ95173.1| NMDA receptor 2, isoform E [Drosophila melanogaster]
Length = 941
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 103/128 (80%), Positives = 111/128 (86%), Gaps = 1/128 (0%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVWKSWE + LDI+DI WPGNSH PPQGVPEKFHLKITFLEEAPYI +SP DPV+GKC
Sbjct: 328 IGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKFHLKITFLEEAPYINLSPADPVSGKCL 387
Query: 87 MNRGVICRVAGDADMDK-IDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVED 145
M+RGV+CRVA D +M IDV AH NESFYQCCSGFCIDLL KFAEELGFTYELVRVED
Sbjct: 388 MDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGFCIDLLEKFAEELGFTYELVRVED 447
Query: 146 GKWGTQED 153
GKWGT E+
Sbjct: 448 GKWGTLEN 455
>gi|21310151|gb|AAM46167.1|AF381249_1 NMDA receptor 2 [Drosophila melanogaster]
Length = 841
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 103/128 (80%), Positives = 111/128 (86%), Gaps = 1/128 (0%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVWKSWE + LDI+DI WPGNSH PPQGVPEKFHLKITFLEEAPYI +SP DPV+GKC
Sbjct: 228 IGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKFHLKITFLEEAPYINLSPADPVSGKCL 287
Query: 87 MNRGVICRVAGDADMDK-IDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVED 145
M+RGV+CRVA D +M IDV AH NESFYQCCSGFCIDLL KFAEELGFTYELVRVED
Sbjct: 288 MDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGFCIDLLEKFAEELGFTYELVRVED 347
Query: 146 GKWGTQED 153
GKWGT E+
Sbjct: 348 GKWGTLEN 355
>gi|380018465|ref|XP_003693148.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2-like [Apis
florea]
Length = 1052
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 114/127 (89%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVWKSWEKEGLDIKDIVWPGN+HTPPQGVPEKF+LKITFLEE PYI ++PPDPV+GKC
Sbjct: 409 IGVWKSWEKEGLDIKDIVWPGNTHTPPQGVPEKFYLKITFLEEPPYINLAPPDPVSGKCL 468
Query: 87 MNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDG 146
M+RGV CRVA D+DM ++D A NESF+QCCSGFCIDLL KF+EE+GFTYELVRVEDG
Sbjct: 469 MDRGVHCRVAKDSDMVEMDTQSAQKNESFFQCCSGFCIDLLQKFSEEIGFTYELVRVEDG 528
Query: 147 KWGTQED 153
KWGT E+
Sbjct: 529 KWGTLEN 535
>gi|328790192|ref|XP_396271.4| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2 [Apis
mellifera]
Length = 1069
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 114/127 (89%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVWKSWEKEGLDIKDIVWPGN+HTPPQGVPEKF+LKITFLEE PYI ++PPDPV+GKC
Sbjct: 412 IGVWKSWEKEGLDIKDIVWPGNTHTPPQGVPEKFYLKITFLEEPPYINLAPPDPVSGKCL 471
Query: 87 MNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDG 146
M+RGV CRVA D+DM ++D A NESF+QCCSGFCIDLL KF+EE+GFTYELVRVEDG
Sbjct: 472 MDRGVHCRVAKDSDMVEMDTQSAQKNESFFQCCSGFCIDLLQKFSEEIGFTYELVRVEDG 531
Query: 147 KWGTQED 153
KWGT E+
Sbjct: 532 KWGTLEN 538
>gi|115646257|gb|ABJ16993.1| IP07111p [Drosophila melanogaster]
Length = 594
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/125 (81%), Positives = 109/125 (87%), Gaps = 1/125 (0%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVWKSWE + LDI+DI WPGNSH PPQGVPEKFHLKITFLEEAPYI +SP DPV+GKC
Sbjct: 470 IGVWKSWETQKLDIRDIAWPGNSHAPPQGVPEKFHLKITFLEEAPYINLSPADPVSGKCL 529
Query: 87 MNRGVICRVAGDADMDK-IDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVED 145
M+RGV+CRVA D +M IDV AH NESFYQCCSGFCIDLL KFAEELGFTYELVRVED
Sbjct: 530 MDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGFCIDLLEKFAEELGFTYELVRVED 589
Query: 146 GKWGT 150
GKWGT
Sbjct: 590 GKWGT 594
>gi|242015842|ref|XP_002428556.1| NMDA-type glutamate receptor subunit 1, variant, putative
[Pediculus humanus corporis]
gi|212513190|gb|EEB15818.1| NMDA-type glutamate receptor subunit 1, variant, putative
[Pediculus humanus corporis]
Length = 584
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 100/127 (78%), Positives = 115/127 (90%), Gaps = 1/127 (0%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVWKSW+K+GLDIKDIVWPGNSHTPPQGVPEKFH+KITFLEE PYI ++PPDPVTGKC+
Sbjct: 421 IGVWKSWQKQGLDIKDIVWPGNSHTPPQGVPEKFHMKITFLEEPPYINLAPPDPVTGKCS 480
Query: 87 MNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDG 146
MNRGV+CR+A D ++ + +V+ + N SFYQCCSGFCIDLL KFAEELGFTYELVRVEDG
Sbjct: 481 MNRGVLCRIAKDVELLE-EVSDSPRNGSFYQCCSGFCIDLLEKFAEELGFTYELVRVEDG 539
Query: 147 KWGTQED 153
KWGT E+
Sbjct: 540 KWGTLEN 546
>gi|328722909|ref|XP_001943685.2| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2-like
[Acyrthosiphon pisum]
Length = 1102
Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/149 (69%), Positives = 121/149 (81%), Gaps = 2/149 (1%)
Query: 7 KSMIIEIELFHPTIFTSGIC--IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKI 64
KS ++I P + S + IGVWKSWE+EGL IKDIVWPG+SHTPPQGVPEKF+L+I
Sbjct: 444 KSAELKIMNLRPGVGNSLVWEEIGVWKSWEREGLYIKDIVWPGDSHTPPQGVPEKFNLRI 503
Query: 65 TFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCI 124
TFLEEAPYI ++PPDP+TGKC+MNRGV+CR+A D +DV A N S+YQCCSGFCI
Sbjct: 504 TFLEEAPYITLAPPDPITGKCSMNRGVLCRIARGKDTQGLDVIEAKRNSSYYQCCSGFCI 563
Query: 125 DLLGKFAEELGFTYELVRVEDGKWGTQED 153
DLL KFAE+LGFTYELVRVEDGKWGT E+
Sbjct: 564 DLLEKFAEDLGFTYELVRVEDGKWGTLEN 592
>gi|345490552|ref|XP_001606376.2| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2-like
[Nasonia vitripennis]
Length = 893
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 96/127 (75%), Positives = 109/127 (85%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IG WKSWEK+GLDIKDIVWPGN HTPPQGVPEKFH+KITFLEE PYI ++PPDPV+GKC
Sbjct: 376 IGTWKSWEKDGLDIKDIVWPGNMHTPPQGVPEKFHVKITFLEEPPYINLAPPDPVSGKCL 435
Query: 87 MNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDG 146
M RGV CRVA ++D+ + D+ A N S YQCCSGFCIDLL KF+EE+GFTYELVRVEDG
Sbjct: 436 MERGVHCRVAKESDLQEADLQTAQRNGSSYQCCSGFCIDLLQKFSEEMGFTYELVRVEDG 495
Query: 147 KWGTQED 153
KWGT E+
Sbjct: 496 KWGTLEN 502
>gi|357609964|gb|EHJ66761.1| putative glutamate receptor, ionotropic, n-methyl d-aspartate
epsilon [Danaus plexippus]
Length = 1077
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 85/124 (68%), Positives = 102/124 (82%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IG W S+ KE L IKDIVWPG HTPPQGVPEKFH++ITFLEE PYI ++PPDPV+G+C+
Sbjct: 426 IGTWNSYPKERLVIKDIVWPGGLHTPPQGVPEKFHMRITFLEEPPYINLAPPDPVSGRCS 485
Query: 87 MNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDG 146
++RGVICRVA + ++ ++ AH N S YQCCSGFCIDLL + AE LGFTYELVRVEDG
Sbjct: 486 LDRGVICRVAPEIEVAGLEAGTAHRNSSLYQCCSGFCIDLLQQLAEHLGFTYELVRVEDG 545
Query: 147 KWGT 150
+WGT
Sbjct: 546 RWGT 549
>gi|3292888|emb|CAA19838.1| EG:80H7.7 [Drosophila melanogaster]
Length = 1012
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/157 (59%), Positives = 114/157 (72%), Gaps = 18/157 (11%)
Query: 5 FQKSMIIEIELFHPTI-FTSGICIGVWKSWEKEGLDI------KDIVWPGNSHTPPQGVP 57
+ +++ IE +L P I FT+ G +S E + +++ K++VW +GVP
Sbjct: 267 YLRNVSIEGDLNKPNIEFTAD---GDLRSAELKIMNLRPSANNKNLVWE-------EGVP 316
Query: 58 EKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDK-IDVAMAHHNESFY 116
EKFHLKITFLEEAPYI +SP DPV+GKC M+RGV+CRVA D +M IDV AH NESFY
Sbjct: 317 EKFHLKITFLEEAPYINLSPADPVSGKCLMDRGVLCRVAADHEMAADIDVGQAHRNESFY 376
Query: 117 QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
QCCSGFCIDLL KFAEELGFTYELVRVEDGKWGT E+
Sbjct: 377 QCCSGFCIDLLEKFAEELGFTYELVRVEDGKWGTLEN 413
>gi|195564614|ref|XP_002105909.1| GD16419 [Drosophila simulans]
gi|194203274|gb|EDX16850.1| GD16419 [Drosophila simulans]
Length = 932
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 82/128 (64%), Positives = 91/128 (71%), Gaps = 14/128 (10%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVWKSWE + LDI+DI WPGNSH PPQG + + I L + GKC
Sbjct: 332 IGVWKSWETQKLDIRDIAWPGNSHAPPQG---RHPISICRLRTH----------IEGKCL 378
Query: 87 MNRGVICRVAGDADMD-KIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVED 145
M+RGV+CRVA D +M IDV AH NESFYQCCSGFCIDLL KFAEELGFTYELVRVED
Sbjct: 379 MDRGVLCRVAADHEMAADIDVGQAHRNESFYQCCSGFCIDLLEKFAEELGFTYELVRVED 438
Query: 146 GKWGTQED 153
GKWGT E+
Sbjct: 439 GKWGTLEN 446
>gi|321478199|gb|EFX89157.1| hypothetical protein DAPPUDRAFT_41686 [Daphnia pulex]
Length = 937
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 69/125 (55%), Positives = 91/125 (72%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IG W SW+K+GLDI+DIVWPG+SH PP+ P+KFHLK+ FLEE P+I + PPDPV+G+C
Sbjct: 377 IGHWHSWKKDGLDIQDIVWPGHSHVPPEDGPDKFHLKVAFLEEPPFISIVPPDPVSGRCP 436
Query: 87 MNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDG 146
++ GV C V ++ + QCCSGFCIDLL KF+++LGFTYEL+RV+D
Sbjct: 437 VSHGVPCHVGNHVPLNGETDPGLFPARNVTQCCSGFCIDLLEKFSDDLGFTYELIRVDDP 496
Query: 147 KWGTQ 151
K+GT
Sbjct: 497 KFGTH 501
>gi|242002104|ref|XP_002435695.1| ionotropic glutamate receptor, putative [Ixodes scapularis]
gi|215499031|gb|EEC08525.1| ionotropic glutamate receptor, putative [Ixodes scapularis]
Length = 852
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 68/129 (52%), Positives = 92/129 (71%), Gaps = 3/129 (2%)
Query: 28 GVWK---SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGK 84
G W W ++G+DIKDIVWPGN PP+GVPEKF+LK+TF+EE P++ + PD TG+
Sbjct: 297 GYWDRIGGWTQKGIDIKDIVWPGNELVPPRGVPEKFNLKVTFMEERPFLNIGQPDNETGE 356
Query: 85 CNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
C R V CRV +A + I+ A N ++Y+CC GFCIDLL KFA++LGFTY++ RVE
Sbjct: 357 CESGRAVKCRVVPEAMLQGINDTAARKNSTYYKCCLGFCIDLLQKFAQDLGFTYDIHRVE 416
Query: 145 DGKWGTQED 153
DG WG +++
Sbjct: 417 DGTWGVKDN 425
>gi|321466942|gb|EFX77934.1| hypothetical protein DAPPUDRAFT_105549 [Daphnia pulex]
Length = 362
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/133 (52%), Positives = 96/133 (72%)
Query: 21 FTSGICIGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDP 80
+ S + IG W SW+K+GLDI+DIVWPG+SH PP+ P+KFHLK+ FLEE P+I + PPDP
Sbjct: 13 WNSTLTIGHWHSWKKDGLDIQDIVWPGHSHVPPENGPDKFHLKVAFLEEPPFISIVPPDP 72
Query: 81 VTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYEL 140
V+G+ ++ GV CRV ++ + QCCSGFCIDLL KF+++LGFTYEL
Sbjct: 73 VSGRYPVSHGVPCRVGNHVPLNGETDPGLFPARNVTQCCSGFCIDLLEKFSDDLGFTYEL 132
Query: 141 VRVEDGKWGTQED 153
+RV+D K+GT ++
Sbjct: 133 IRVDDPKYGTHQN 145
>gi|391341490|ref|XP_003745063.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2-like
[Metaseiulus occidentalis]
Length = 962
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 92/128 (71%), Gaps = 3/128 (2%)
Query: 28 GVWKS---WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGK 84
VW+ W ++G+DIKDI+WPG PP+GVPEKF+LK+TF+EE P+I + P+ TG+
Sbjct: 360 SVWEKIGEWSEDGVDIKDIIWPGGERKPPKGVPEKFNLKVTFMEEKPFIIVGLPNSETGE 419
Query: 85 CNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
C +R V CR+ ++ + + +A N +FY+CC GFCIDLL KFA+++GFTY+L +VE
Sbjct: 420 CESSRAVKCRIVPESHIIGHNDTIARRNPNFYRCCMGFCIDLLEKFAQDIGFTYDLSKVE 479
Query: 145 DGKWGTQE 152
DG WG ++
Sbjct: 480 DGMWGVKD 487
>gi|443723102|gb|ELU11683.1| hypothetical protein CAPTEDRAFT_179505 [Capitella teleta]
Length = 1037
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 86/139 (61%), Gaps = 5/139 (3%)
Query: 12 EIELFHPTIFTSGICIGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAP 71
E+E+ + IG W + +EGL++ DI WPG S TPP+G+P K+H+++ LEE P
Sbjct: 305 EVEIHNLKKDKKFKKIGTWNT--EEGLEMNDITWPGESPTPPKGLPSKYHMRVVTLEEKP 362
Query: 72 YIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFA 131
Y+ S PDP TG C + ICRVA D I VA A N S Y+CCSG CIDLL +
Sbjct: 363 YVVYSDPDPRTGSCP-PQSTICRVA--PLNDTIHVANATSNSSLYKCCSGLCIDLLMMLS 419
Query: 132 EELGFTYELVRVEDGKWGT 150
E++ F ++L +VED KWG
Sbjct: 420 EKISFEFDLFQVEDKKWGA 438
>gi|392922041|ref|NP_001256640.1| Protein NMR-2, isoform a [Caenorhabditis elegans]
gi|327415444|gb|AAK01102.2|AF318614_1 NMDA-type ionotropic glutamate receptor NMR-2 [Caenorhabditis
elegans]
gi|339730652|emb|CAB01667.4| Protein NMR-2, isoform a [Caenorhabditis elegans]
Length = 990
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 76/129 (58%), Gaps = 9/129 (6%)
Query: 31 KSWEKEG------LDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGK 84
K+WEK G L + D+ WPG PPQG +KFH+K+ L E P+I +S DP T K
Sbjct: 426 KTWEKVGIFTNNELKMADVQWPGEKANPPQGAADKFHVKVVTLHEPPFIAVSDVDPDTQK 485
Query: 85 CNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
C N+G IC D++ D A N + +CCSG+C+DLL K A ++GFTY L +V
Sbjct: 486 CPGNQGSICDW---GDVEYTDGAGVKKNRTLLKCCSGYCVDLLNKLANDIGFTYTLYKVR 542
Query: 145 DGKWGTQED 153
D KWG + +
Sbjct: 543 DEKWGLKTE 551
>gi|268559458|ref|XP_002637720.1| C. briggsae CBR-NMR-2 protein [Caenorhabditis briggsae]
Length = 810
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 76/129 (58%), Gaps = 9/129 (6%)
Query: 31 KSWEKEG------LDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGK 84
K+WEK G L + D+ WPG PPQG +KFH+K+ L E P+I +S DP T K
Sbjct: 247 KTWEKVGIFTNNELKMADVQWPGEKANPPQGTADKFHVKVVTLHEPPFITVSDVDPDTQK 306
Query: 85 CNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
C N+G IC D++ D A N + +CCSG+C+DLL K A ++GFTY L +V
Sbjct: 307 CPGNQGSICDW---GDVEYTDDAGVKKNRTLLKCCSGYCVDLLNKLATDIGFTYTLYKVR 363
Query: 145 DGKWGTQED 153
D KWG + +
Sbjct: 364 DEKWGLKTE 372
>gi|308463240|ref|XP_003093896.1| CRE-NMR-2 protein [Caenorhabditis remanei]
gi|308248885|gb|EFO92837.1| CRE-NMR-2 protein [Caenorhabditis remanei]
Length = 1113
Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 76/129 (58%), Gaps = 9/129 (6%)
Query: 31 KSWEKEG------LDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGK 84
K+WEK G L + D+ WPG PPQG +KFH+K+ L E P+I +S DP T K
Sbjct: 539 KTWEKVGIFTNNELKMADVQWPGEKANPPQGAADKFHVKVVTLHEPPFITVSDVDPDTQK 598
Query: 85 CNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
C N+G IC D++ D A N + +CCSG+C+DLL K A ++GFTY L +V
Sbjct: 599 CPGNQGSICDW---GDVEYTDDAGIKKNRTLLKCCSGYCVDLLNKLANDIGFTYTLYKVR 655
Query: 145 DGKWGTQED 153
D KWG + +
Sbjct: 656 DEKWGLKTE 664
>gi|307174216|gb|EFN64861.1| Glutamate [NMDA] receptor subunit epsilon-2 [Camponotus floridanus]
Length = 651
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/50 (78%), Positives = 44/50 (88%)
Query: 104 IDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
+D+ A NESFYQCCSGFCIDLL KF+EE+GFTYELVRVEDGKWGT E+
Sbjct: 1 MDIQSAQKNESFYQCCSGFCIDLLQKFSEEIGFTYELVRVEDGKWGTLEN 50
>gi|332028412|gb|EGI68456.1| Glutamate [NMDA] receptor subunit epsilon-2 [Acromyrmex echinatior]
Length = 536
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 104 IDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
+D+ AH N SFYQCCSGFCIDLL KF+EE+GFT+EL+RVEDGKWGT E+
Sbjct: 1 VDIQSAHRNGSFYQCCSGFCIDLLQKFSEEIGFTFELIRVEDGKWGTLEN 50
>gi|260826387|ref|XP_002608147.1| hypothetical protein BRAFLDRAFT_91374 [Branchiostoma floridae]
gi|229293497|gb|EEN64157.1| hypothetical protein BRAFLDRAFT_91374 [Branchiostoma floridae]
Length = 940
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SW K+ L ++ + WPGN +PP G+ + H++I + E P+I + PD +TG+C+ V
Sbjct: 536 SWNKDSLYMEGVTWPGNKASPPNGISKDKHIRIVAVLEHPFITATEPD-ITGECHNT--V 592
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
C+ I + CC+GFCIDLL + A ++ F+Y+L V D K G
Sbjct: 593 ECKKINRTARGGIKM-----------CCTGFCIDLLKELARDVMFSYDLYLVPDNKHGKY 641
Query: 152 E 152
E
Sbjct: 642 E 642
>gi|325296903|ref|NP_001191485.1| NR2 [Aplysia californica]
gi|167995415|gb|ACA13599.1| NR2 [Aplysia californica]
Length = 1164
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 30 WKS---WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
WK W++ GL + DI WPG + PP G P++ L++ L E PY+ + G C
Sbjct: 362 WKEVGRWKRHGLIMDDITWPGGASIPPSGKPKRAFLRVATLYELPYVIYGELEK-DGNCQ 420
Query: 87 MNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDG 146
+ ++C V + +K V+ N + +CC+G +DLL ++EL F Y++ V DG
Sbjct: 421 -EKSLVCWVY-RRNENKEPVS----NVTVKKCCTGLSMDLLKILSDELNFEYKITEVRDG 474
Query: 147 KWG 149
KWG
Sbjct: 475 KWG 477
>gi|291244826|ref|XP_002742295.1| PREDICTED: N-methyl-D-aspartate receptor subunit NR1-8a-like,
partial [Saccoglossus kowalevskii]
Length = 803
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 24/128 (18%)
Query: 33 WEKEGLDIKDIVWPGNS-HTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN-RG 90
WE + + I +VWPG PP+GV L+IT ++ P++ + PP+ G C+ + +
Sbjct: 246 WENKQVKIGSVVWPGGQVGKPPEGVSLSSRLQITTIDTKPFVMVGPPNS-EGSCSHDIKA 304
Query: 91 VICRVAGDADMDKIDVAMAHHNES------FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
V C A +N+S CC+GFCIDLL K A+ L F+Y+L V
Sbjct: 305 VEC---------------AQYNKSGDGGDWSTMCCTGFCIDLLVKLADHLNFSYDLHLVS 349
Query: 145 DGKWGTQE 152
DGK+GT E
Sbjct: 350 DGKYGTLE 357
>gi|291226546|ref|XP_002733261.1| PREDICTED: ionotropic glutamate receptor NMDA2-like [Saccoglossus
kowalevskii]
Length = 1064
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 15/121 (12%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W + GL I DI W G H P+G+ H+ T + E Y+ + + +C GV
Sbjct: 421 WTRHGLVINDITWMGGLHQQPEGLTPHRHITFTTITEGSYVSVIELNE--EECTA--GVR 476
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
CR+ D E +Y+CC GFC+DLL + + ++GF ++L VED K+G E
Sbjct: 477 CRLLDDET-----------GEHYYRCCIGFCVDLLLRLSRDIGFIFDLYVVEDLKFGANE 525
Query: 153 D 153
+
Sbjct: 526 N 526
>gi|281348398|gb|EFB23982.1| hypothetical protein PANDA_006323 [Ailuropoda melanoleuca]
Length = 804
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 305 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 362
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A+ +GF+Y+L V +GK G +
Sbjct: 363 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAQTIGFSYDLYLVTNGKHGKK 418
Query: 152 ED 153
D
Sbjct: 419 ID 420
>gi|297485794|ref|XP_002695241.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-4 [Bos taurus]
gi|296477645|tpg|DAA19760.1| TPA: glutamate receptor, ionotropic, N-methyl D-aspartate 2D [Bos
taurus]
Length = 1105
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 402 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 459
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A+ +GF+Y+L V +GK G +
Sbjct: 460 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAQTIGFSYDLYLVTNGKHGKK 515
Query: 152 ED 153
D
Sbjct: 516 ID 517
>gi|119910783|ref|XP_875596.2| PREDICTED: glutamate [NMDA] receptor subunit epsilon-4 [Bos taurus]
Length = 964
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 403 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 460
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A+ +GF+Y+L V +GK G +
Sbjct: 461 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAQTIGFSYDLYLVTNGKHGKK 516
Query: 152 ED 153
D
Sbjct: 517 ID 518
>gi|431920808|gb|ELK18581.1| Glutamate [NMDA] receptor subunit epsilon-4 [Pteropus alecto]
Length = 782
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 272 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 329
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A+ +GF+Y+L V +GK G +
Sbjct: 330 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAQTIGFSYDLYLVTNGKHGKK 385
Query: 152 ED 153
D
Sbjct: 386 ID 387
>gi|403299466|ref|XP_003940506.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-4 [Saimiri
boliviensis boliviensis]
Length = 895
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 318 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 375
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A+ +GF+Y+L V +GK G +
Sbjct: 376 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAQTIGFSYDLYLVTNGKHGKK 431
Query: 152 ED 153
D
Sbjct: 432 ID 433
>gi|335289901|ref|XP_003127322.2| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-4 [Sus scrofa]
Length = 1333
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 403 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 460
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A+ +GF+Y+L V +GK G +
Sbjct: 461 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAQTIGFSYDLYLVTNGKHGKK 516
Query: 152 ED 153
D
Sbjct: 517 ID 518
>gi|301765075|ref|XP_002917970.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-4-like
[Ailuropoda melanoleuca]
Length = 921
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 333 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 390
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A+ +GF+Y+L V +GK G +
Sbjct: 391 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAQTIGFSYDLYLVTNGKHGKK 446
Query: 152 ED 153
D
Sbjct: 447 ID 448
>gi|355703727|gb|EHH30218.1| hypothetical protein EGK_10837, partial [Macaca mulatta]
Length = 732
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 248 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 305
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 306 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 361
Query: 152 ED 153
D
Sbjct: 362 ID 363
>gi|351702591|gb|EHB05510.1| Glutamate [NMDA] receptor subunit epsilon-4, partial
[Heterocephalus glaber]
Length = 797
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 309 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 366
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 367 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 422
Query: 152 ED 153
D
Sbjct: 423 ID 424
>gi|73948055|ref|XP_541520.2| PREDICTED: glutamate [NMDA] receptor subunit epsilon-4 [Canis lupus
familiaris]
Length = 1202
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 268 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 325
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A+ +GF+Y+L V +GK G +
Sbjct: 326 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAQTIGFSYDLYLVTNGKHGKK 381
Query: 152 ED 153
D
Sbjct: 382 ID 383
>gi|410982870|ref|XP_003997769.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-4 [Felis
catus]
Length = 813
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 298 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 355
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A+ +GF+Y+L V +GK G +
Sbjct: 356 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAQTIGFSYDLYLVTNGKHGKK 411
Query: 152 ED 153
D
Sbjct: 412 ID 413
>gi|388462211|gb|AFK32775.1| N-methyl-D-aspartate receptor subunit NR1, partial [Oncorhynchus
keta]
Length = 810
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 13/136 (9%)
Query: 25 ICIGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGK 84
I +G++ + + + I+WPG P+G LKI + + P++ + P + G
Sbjct: 323 IQVGIYNGTQVVMNNQRKIIWPGGETEKPRGFQMSTRLKIVTIHQEPFVYVKPTEQ-DGT 381
Query: 85 CNMNRGVICRVAGDADMDKIDVAMAHHNESFY------QCCSGFCIDLLGKFAEELGFTY 138
C + + G AD+ K V NE+ QCC GFCIDLL K A + FTY
Sbjct: 382 CKEEKTL----NGVADIKK--VICTGPNETIPGRPIVPQCCYGFCIDLLIKLAGTMNFTY 435
Query: 139 ELVRVEDGKWGTQEDL 154
E+ V DGK+GTQE L
Sbjct: 436 EVHLVADGKFGTQERL 451
>gi|410903065|ref|XP_003965014.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-3-like
[Takifugu rubripes]
Length = 1413
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 14/126 (11%)
Query: 31 KSWEKEG------LDIKDIVWPG-NSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTG 83
+ W+K G L ++ VWP S+ P V + HL + LEE P++ + DPVTG
Sbjct: 380 RQWDKVGNYEMGILQMRYPVWPRYGSYLEP--VSDYRHLTVATLEERPFVIVESVDPVTG 437
Query: 84 KCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
C N V CR +K +V + H CC GFCID+L K + + F+Y+L V
Sbjct: 438 TCVSNT-VPCR----RQSNKTEVIVGHTEPYTKLCCKGFCIDILKKLSRNIKFSYDLYLV 492
Query: 144 EDGKWG 149
+GK G
Sbjct: 493 TNGKHG 498
>gi|351711749|gb|EHB14668.1| Glutamate [NMDA] receptor subunit zeta-1 [Heterocephalus glaber]
Length = 1039
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + VT + + VIC
Sbjct: 488 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEVTVNGDPVKKVIC 547
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 548 TGPNDT-------SPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQE 599
>gi|402906198|ref|XP_003915890.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-4 [Papio
anubis]
Length = 1232
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 403 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 460
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 461 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 516
Query: 152 ED 153
D
Sbjct: 517 ID 518
>gi|426389537|ref|XP_004061176.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-4 [Gorilla
gorilla gorilla]
Length = 1321
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 385 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 442
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 443 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 498
Query: 152 ED 153
D
Sbjct: 499 ID 500
>gi|397486098|ref|XP_003814168.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-4 [Pan
paniscus]
Length = 1158
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 463 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 520
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 521 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 576
Query: 152 ED 153
D
Sbjct: 577 ID 578
>gi|395858432|ref|XP_003801575.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-4 [Otolemur
garnettii]
Length = 1332
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 400 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 457
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 458 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 513
Query: 152 ED 153
D
Sbjct: 514 ID 515
>gi|256997180|dbj|BAI22783.1| glutamate receptor, ionotropic, N-methyl D-aspartate 2D [Pan
troglodytes]
Length = 1336
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 403 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 460
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 461 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 516
Query: 152 ED 153
D
Sbjct: 517 ID 518
>gi|153946391|ref|NP_000827.2| glutamate receptor ionotropic, NMDA 2D precursor [Homo sapiens]
gi|229462910|sp|O15399.2|NMDE4_HUMAN RecName: Full=Glutamate receptor ionotropic, NMDA 2D; Short=GluN2D;
AltName: Full=EB11; AltName: Full=Glutamate [NMDA]
receptor subunit epsilon-4; AltName: Full=N-methyl
D-aspartate receptor subtype 2D; Short=NMDAR2D;
Short=NR2D; Flags: Precursor
gi|119572731|gb|EAW52346.1| glutamate receptor, ionotropic, N-methyl D-aspartate 2D [Homo
sapiens]
Length = 1336
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 403 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 460
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 461 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 516
Query: 152 ED 153
D
Sbjct: 517 ID 518
>gi|2444026|gb|AAC15910.1| N-methyl-D-aspartate receptor 2D subunit precursor [Homo sapiens]
Length = 1336
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 403 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 460
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 461 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 516
Query: 152 ED 153
D
Sbjct: 517 ID 518
>gi|326665512|ref|XP_003198060.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2-like,
partial [Danio rerio]
Length = 1349
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP E HL I LEEAP++ + DP++G C M V
Sbjct: 197 WENGSLSMKYHVWPRFELYSGPEAREDDHLSIVTLEEAPFVIVEDVDPLSGTC-MRNTVP 255
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR A D A+ +CC GFCID+L K A+ + FTY+L V +GK G +
Sbjct: 256 CRKQLKALNQTQDSAVY-----IKRCCKGFCIDILKKIAKNVKFTYDLYLVTNGKHGKK 309
>gi|297277508|ref|XP_002808251.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-4-like [Macaca mulatta]
Length = 987
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 403 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLSVATLEERPFVIVEPADPISGTC-IRDSV 460
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 461 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 516
Query: 152 ED 153
D
Sbjct: 517 ID 518
>gi|332856484|ref|XP_003316532.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-4 [Pan
troglodytes]
Length = 939
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 450 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 507
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 508 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 563
Query: 152 ED 153
D
Sbjct: 564 ID 565
>gi|144922606|ref|NP_032198.2| glutamate receptor ionotropic, NMDA 2D precursor [Mus musculus]
gi|341942231|sp|Q03391.3|NMDE4_MOUSE RecName: Full=Glutamate receptor ionotropic, NMDA 2D; Short=GluN2D;
AltName: Full=Glutamate [NMDA] receptor subunit
epsilon-4; AltName: Full=N-methyl D-aspartate receptor
subtype 2D; Short=NMDAR2D; Short=NR2D; Flags: Precursor
gi|261278088|dbj|BAI44630.1| ionotropic NMDA glutamate receptor epsilon 4 subunit type 2 [Mus
musculus]
Length = 1323
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 400 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 457
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 458 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 513
Query: 152 ED 153
D
Sbjct: 514 ID 515
>gi|2160438|dbj|BAA02254.1| glutamate receptor channel subunit epsilon 4 [Mus musculus]
Length = 1323
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 400 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 457
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 458 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 513
Query: 152 ED 153
D
Sbjct: 514 ID 515
>gi|260801349|ref|XP_002595558.1| hypothetical protein BRAFLDRAFT_200228 [Branchiostoma floridae]
gi|229280805|gb|EEN51570.1| hypothetical protein BRAFLDRAFT_200228 [Branchiostoma floridae]
Length = 415
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 17/126 (13%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
+G W GL++ IVWPG PP G+ L++ +EE P++ + D GKC
Sbjct: 3 VGTWHESRDVGLNV--IVWPGQRFDPPSGLSHPRKLRVVTIEEHPFVFVGEVDVTMGKCL 60
Query: 87 MNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDG 146
+G+ C+ K+ N++ +CC+GFC+DLL + + + F Y+L VED
Sbjct: 61 --KGIPCQ-------KKVG------NDTLIKCCAGFCVDLLERLSRDAWFDYDLYLVEDN 105
Query: 147 KWGTQE 152
+G +
Sbjct: 106 NFGAYQ 111
>gi|475552|gb|AAA17833.1| N-methyl-D-aspartate receptor NMDAR2D subunit [Rattus norvegicus]
Length = 1323
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 400 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 457
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 458 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 513
Query: 152 ED 153
D
Sbjct: 514 ID 515
>gi|18202594|sp|Q62645.2|NMDE4_RAT RecName: Full=Glutamate receptor ionotropic, NMDA 2D; Short=GluN2D;
AltName: Full=Glutamate [NMDA] receptor subunit
epsilon-4; AltName: Full=N-methyl D-aspartate receptor
subtype 2D; Short=NMDAR2D; Short=NR2D; Flags: Precursor
Length = 1323
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 400 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 457
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 458 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 513
Query: 152 ED 153
D
Sbjct: 514 ID 515
>gi|119609609|gb|EAW89203.1| glutamate receptor, ionotropic, N-methyl D-aspartate 2C, isoform
CRA_b [Homo sapiens]
gi|119609610|gb|EAW89204.1| glutamate receptor, ionotropic, N-methyl D-aspartate 2C, isoform
CRA_b [Homo sapiens]
Length = 1277
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WEHGVLYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + DVA CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDVAPYTK-----LCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 486
>gi|469067|gb|AAC37646.1| NMDA receptor subunit NR2D [Rattus norvegicus]
Length = 1323
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 400 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 457
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 458 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 513
Query: 152 ED 153
D
Sbjct: 514 ID 515
>gi|12248181|ref|NP_073634.1| glutamate receptor ionotropic, NMDA 2D precursor [Rattus
norvegicus]
gi|469069|gb|AAC37647.1| NMDA receptor subunit NR2D [Rattus norvegicus]
Length = 1323
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 400 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 457
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 458 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 513
Query: 152 ED 153
D
Sbjct: 514 ID 515
>gi|261278086|dbj|BAI44629.1| NMDA ionotropic glutamate receptor epsilon 4 subunit type 1 [Mus
musculus]
Length = 1319
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 400 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 457
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 458 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 513
Query: 152 ED 153
D
Sbjct: 514 ID 515
>gi|296203125|ref|XP_002806915.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-3 [Callithrix jacchus]
Length = 1244
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WEHGVLYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + DVA CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDVAPYTK-----LCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 486
>gi|149055858|gb|EDM07289.1| glutamate receptor, ionotropic, N-methyl D-aspartate 2D, isoform
CRA_a [Rattus norvegicus]
Length = 1265
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 400 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 457
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 458 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 513
Query: 152 ED 153
D
Sbjct: 514 ID 515
>gi|286238|dbj|BAA02500.1| N-methyl-D-aspartate receptor subunit [Rattus norvegicus]
Length = 1356
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 400 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 457
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 458 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 513
Query: 152 ED 153
D
Sbjct: 514 ID 515
>gi|402900976|ref|XP_003913435.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-3 [Papio
anubis]
Length = 1243
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WEHGVLYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + DVA CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDVAPYTK-----LCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 486
>gi|348497|pir||C45219 N-methyl-D-aspartate receptor chain NMDAR2D-1 - rat
Length = 1356
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 400 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 457
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 458 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 513
Query: 152 ED 153
D
Sbjct: 514 ID 515
>gi|148690957|gb|EDL22904.1| glutamate receptor, ionotropic, NMDA2D (epsilon 4) [Mus musculus]
Length = 1053
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 130 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 187
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 188 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 243
Query: 152 ED 153
D
Sbjct: 244 ID 245
>gi|2444024|gb|AAB71624.1| N-methyl-D-aspartate receptor 2C subunit precursor [Homo sapiens]
Length = 1236
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WEHGVLYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + DVA CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDVAPYTK-----LCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 486
>gi|397484503|ref|XP_003813414.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-3 [Pan
paniscus]
Length = 1081
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WEHGVLYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + DVA CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDVAPYTK-----LCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 486
>gi|355568898|gb|EHH25179.1| hypothetical protein EGK_08957 [Macaca mulatta]
Length = 1074
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WEHGVLYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + DVA CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDVAPYTK-----LCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 486
>gi|187954965|gb|AAI40802.1| GRIN2C protein [Homo sapiens]
Length = 1236
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WEHGVLYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + DVA CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDVAPYTK-----LCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 486
>gi|119609608|gb|EAW89202.1| glutamate receptor, ionotropic, N-methyl D-aspartate 2C, isoform
CRA_a [Homo sapiens]
Length = 873
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WEHGVLYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + DVA CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDVAPYTK-----LCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 486
>gi|1196449|gb|AAA88096.1| NMDA receptor [Homo sapiens]
Length = 1233
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WEHGVLYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + DVA CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDVAPYTK-----LCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 486
>gi|297273563|ref|XP_002800663.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-3-like [Macaca
mulatta]
Length = 1096
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 229 WEHGVLYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 286
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + DVA CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 287 CRRQSNHTFSSGDVAPYTK-----LCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 340
>gi|62087178|dbj|BAD92036.1| N-methyl-D-aspartate receptor subunit 2C precursor variant [Homo
sapiens]
Length = 306
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 10 WEHGVLYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 67
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + DVA CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 68 CRRQSNHTFSSGDVAPYTK-----LCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 121
>gi|326911853|ref|XP_003202270.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2-like,
partial [Meleagris gallopavo]
Length = 1397
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+++ L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKEKKLQMKYYVWPRFELYPDSEEREDDHLSIVTLEEAPFVIVENVDPLSGTC-MRNTVP 437
Query: 93 C--RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
C R+ + D+ M +CC GFCID+L K ++ + FTY+L V +GK G
Sbjct: 438 CQKRIVTENKTDEEPDYMK-------KCCKGFCIDILKKISKSVKFTYDLYLVTNGKHGK 490
Query: 151 Q 151
+
Sbjct: 491 K 491
>gi|256997178|dbj|BAI22782.1| glutamate receptor, ionotropic, N-methyl D-aspartate 2C [Pan
troglodytes]
Length = 1215
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WEHGVLYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + DVA CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDVAPYTK-----LCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 486
>gi|55770854|ref|NP_000826.2| glutamate receptor ionotropic, NMDA 2C precursor [Homo sapiens]
gi|313104210|sp|Q14957.3|NMDE3_HUMAN RecName: Full=Glutamate receptor ionotropic, NMDA 2C; Short=GluN2C;
AltName: Full=Glutamate [NMDA] receptor subunit
epsilon-3; AltName: Full=N-methyl D-aspartate receptor
subtype 2C; Short=NMDAR2C; Short=NR2C; Flags: Precursor
Length = 1233
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WEHGVLYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + DVA CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDVAPYTK-----LCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 486
>gi|426346655|ref|XP_004040987.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-3 [Gorilla gorilla gorilla]
Length = 1251
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 384 WEHGVLYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 441
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + DVA CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 442 CRRQSNHTFSSGDVAPYTK-----LCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 495
>gi|332849188|ref|XP_511665.3| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-3 [Pan troglodytes]
Length = 1131
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 300 WEHGVLYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 357
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + DVA CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 358 CRRQSNHTFSSGDVAPYTK-----LCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 411
>gi|348559386|ref|XP_003465497.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-4 [Cavia
porcellus]
Length = 785
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 268 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 325
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 326 PCR----SQLNRTHSPPQDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 381
Query: 152 ED 153
D
Sbjct: 382 ID 383
>gi|163914569|ref|NP_001106368.1| glutamate receptor, ionotropic, N-methyl D-aspartate 2B precursor
[Xenopus laevis]
gi|161328593|gb|ABX60544.1| N-methyl-D-aspartate receptor subunit NR2B [Xenopus laevis]
Length = 1449
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 17 HPTIFTSGICIGVWKSWEKEG------LDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEA 70
HP + I + + WE+ G L +K VWP P + HL I LEEA
Sbjct: 354 HPKLVI--ILLNQERKWERVGKYKDRSLKMKYYVWPVFDLYPNSEEHKDEHLSIVTLEEA 411
Query: 71 PYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKF 130
P++ + DP++G C M V CR +I+ +CC GFCID+L K
Sbjct: 412 PFVIVEDVDPLSGTC-MRNTVPCR-----KQIRIENRTEEGGNYIKRCCKGFCIDILKKI 465
Query: 131 AEELGFTYELVRVEDGKWGTQ 151
A+ + FTY+L V +GK G +
Sbjct: 466 AKTVKFTYDLYLVTNGKHGKK 486
>gi|26996819|gb|AAH41128.1| Similar to glutamate receptor, ionotropic, N-methyl D-aspartate 2C,
partial [Homo sapiens]
Length = 907
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 409 WEHGVLYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 466
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + DVA CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 467 CRRQSNHTFSSGDVAPYTK-----LCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 520
>gi|224094654|ref|XP_002195885.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2 [Taeniopygia
guttata]
Length = 1503
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+++ L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKEKKLQMKYYVWPRFELYPDSEEREDDHLSIVTLEEAPFVIVENVDPLSGTC-MRNTVP 437
Query: 93 C--RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
C R+ + D+ M +CC GFCID+L K ++ + FTY+L V +GK G
Sbjct: 438 CQKRIVTENKTDEEPDYMK-------KCCKGFCIDILKKISKSVKFTYDLYLVTNGKHGK 490
Query: 151 Q 151
+
Sbjct: 491 K 491
>gi|118082661|ref|XP_416204.2| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2 [Gallus
gallus]
Length = 1504
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+++ L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKEKKLQMKYYVWPRFELYPDSEEREDDHLSIVTLEEAPFVIVENVDPLSGTC-MRNTVP 437
Query: 93 C--RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
C R+ + D+ M +CC GFCID+L K ++ + FTY+L V +GK G
Sbjct: 438 CQKRIVTENKTDEEPDYMK-------KCCKGFCIDILKKISKSVKFTYDLYLVTNGKHGK 490
Query: 151 Q 151
+
Sbjct: 491 K 491
>gi|355755996|gb|EHH59743.1| hypothetical protein EGM_09930, partial [Macaca fascicularis]
Length = 735
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 248 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 305
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 306 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 361
Query: 152 ED 153
D
Sbjct: 362 ID 363
>gi|149055859|gb|EDM07290.1| glutamate receptor, ionotropic, N-methyl D-aspartate 2D, isoform
CRA_b [Rattus norvegicus]
Length = 995
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 130 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 187
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 188 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 243
Query: 152 ED 153
D
Sbjct: 244 ID 245
>gi|403280850|ref|XP_003931921.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-3 [Saimiri
boliviensis boliviensis]
Length = 1151
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 472 WEHGVLYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 529
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + DVA CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 530 CRRQSNHTFSSGDVAPYTK-----LCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 583
>gi|118404768|ref|NP_001072593.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1 precursor
[Xenopus (Silurana) tropicalis]
gi|116063490|gb|AAI22962.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1 [Xenopus
(Silurana) tropicalis]
Length = 899
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 60/121 (49%), Gaps = 16/121 (13%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDAD 100
+ I+WPG PQG LKI + + P++ + P M G CR +
Sbjct: 377 RKIIWPGGETERPQGYQMSTRLKIVTIHQEPFVYVKP--------TMTDGT-CREEYTIN 427
Query: 101 MDKIDVAMAHH-NESFY------QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D I + + NE+ QCC GFCIDLL K A E+ FTYE+ V DGK+GTQE
Sbjct: 428 GDPIKKVICNGPNETIPGRPTVPQCCYGFCIDLLIKLAREMNFTYEVHLVADGKFGTQER 487
Query: 154 L 154
+
Sbjct: 488 V 488
>gi|345316719|ref|XP_001519696.2| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2-like,
partial [Ornithorhynchus anatinus]
Length = 660
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 16/124 (12%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN---- 88
W+ + L +K VWP P E HL I LEEAP++ + DP++G C N
Sbjct: 367 WKDKSLQMKYYVWPRFELCPDTEEREDDHLSIVTLEEAPFVIVESVDPLSGTCMRNTVPC 426
Query: 89 -RGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGK 147
+ +I D + D I +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 427 QKRIITENKTDEEPDYIK-----------KCCKGFCIDILKKISKSVKFTYDLYLVTNGK 475
Query: 148 WGTQ 151
G +
Sbjct: 476 HGKK 479
>gi|297701726|ref|XP_002827855.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-3 [Pongo abelii]
Length = 1238
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 371 WEHGILYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 428
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + DVA CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 429 CRRQSNHTFSSGDVAPYTK-----LCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 482
>gi|260787076|ref|XP_002588581.1| hypothetical protein BRAFLDRAFT_251337 [Branchiostoma floridae]
gi|229273746|gb|EEN44592.1| hypothetical protein BRAFLDRAFT_251337 [Branchiostoma floridae]
Length = 399
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 14/116 (12%)
Query: 38 LDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAG 97
+ + I+WPGNS+ P+ V ++ HLK+ +EE P++ ++ PVTG C + +
Sbjct: 4 ISLNGIIWPGNSYLAPRPVNQR-HLKVVTIEEEPFVMVTDLSPVTGDCT--KAALPCTKF 60
Query: 98 DADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D++ + D +CC+GFC+DLL + ++ FT E+ V DG+ GT +
Sbjct: 61 DSNGQRED-----------KCCAGFCMDLLEQLKDDAWFTVEIYVVADGRHGTVQS 105
>gi|118098077|ref|XP_425252.2| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1 [Gallus
gallus]
Length = 1458
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 11/126 (8%)
Query: 29 VWKS---WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKC 85
VW+ WE L +K VWP S + P+ HL I LEEAP++ + DP+ C
Sbjct: 368 VWEKVGKWENNSLSLKYSVWPRYS-SFADSDPDDNHLSIVTLEEAPFVIVEDVDPLMESC 426
Query: 86 NMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVED 145
N V CR KI+ + + + +CC GFCID+L K ++ + FTY+L V +
Sbjct: 427 QKN-TVPCR-----KFVKINNS-TNEGTNVKKCCKGFCIDILKKLSKTVKFTYDLYLVTN 479
Query: 146 GKWGTQ 151
GK G +
Sbjct: 480 GKHGKK 485
>gi|205362475|emb|CAP08277.1| N-methyl D-aspartate receptor subunit 2B [Carassius carassius]
Length = 317
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 10/121 (8%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP E HL I LEEAP++ + DP++G C M V
Sbjct: 159 WENGSLSMKFHVWPRFELYSGTESREDDHLSIVTLEEAPFVMVEDVDPLSGTC-MRNTVP 217
Query: 93 CRVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
CR ++ + Y +CC GFCID+L K A+ + FTY+L V +GK G
Sbjct: 218 CR-------KQLKTLNKTGDSGIYIKRCCKGFCIDILKKIAKSVKFTYDLYLVTNGKHGK 270
Query: 151 Q 151
+
Sbjct: 271 K 271
>gi|444727120|gb|ELW67625.1| Glutamate [NMDA] receptor subunit epsilon-1 [Tupaia chinensis]
Length = 1119
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 33 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNT-VP 90
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 91 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 143
>gi|194678550|ref|XP_874010.3| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1, partial
[Bos taurus]
Length = 1128
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 42 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNT-VP 99
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 100 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 152
>gi|410926387|ref|XP_003976660.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1-like, partial
[Takifugu rubripes]
Length = 774
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 25 ICIGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGK 84
I +G++ + + + I+WPG PQG LKI + + P++ + P P G
Sbjct: 192 IQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVTIHQEPFVYVKPTMP-DGT 250
Query: 85 C----NMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYEL 140
C +N +I +V + I + QCC GFC+DLL K A + FTYE+
Sbjct: 251 CKEEMTLNGVLIKKVICTGPNETIP-----GRPTVPQCCYGFCVDLLIKLAMTMNFTYEV 305
Query: 141 VRVEDGKWGTQEDL 154
V DGK+GTQE +
Sbjct: 306 HLVADGKFGTQERV 319
>gi|405969439|gb|EKC34410.1| Glutamate [NMDA] receptor subunit epsilon-2 [Crassostrea gigas]
Length = 1042
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 63/132 (47%), Gaps = 7/132 (5%)
Query: 24 GICIGVWKSWEKE---GLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDP 80
+ IG W + E+ L++K I WPG+ PP+G PE+ I LEE PY+ + +
Sbjct: 388 NVQIGRWYAEERTLNPKLELKGITWPGDKKIPPRGRPERRFFSIATLEEEPYVMYTKRNE 447
Query: 81 VTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYEL 140
G CN V CR+ + + D A N + CC+G IDLL L F Y+L
Sbjct: 448 -KGACN-PPAVSCRIVYNRTLHGDDPTAA--NGTVQWCCAGLSIDLLQILRTRLEFDYDL 503
Query: 141 VRVEDGKWGTQE 152
V D G ++
Sbjct: 504 FEVPDRTCGVKD 515
>gi|402907628|ref|XP_003916571.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1 [Papio
anubis]
Length = 1168
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 82 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNT-VP 139
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 140 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 192
>gi|351710704|gb|EHB13623.1| Glutamate [NMDA] receptor subunit epsilon-1 [Heterocephalus glaber]
Length = 1130
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 44 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNT-VP 101
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 102 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 154
>gi|297283468|ref|XP_002802440.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1-like [Macaca
mulatta]
Length = 1145
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 82 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNT-VP 139
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 140 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 192
>gi|297490088|ref|XP_002697938.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1 [Bos taurus]
gi|296473555|tpg|DAA15670.1| TPA: glutamate receptor, ionotropic, N-methyl D-aspartate 2A [Bos
taurus]
Length = 1226
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 140 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNT-VP 197
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 198 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 250
>gi|326665883|ref|XP_002661175.2| PREDICTED: glutamate [NMDA] receptor subunit epsilon-3-like [Danio
rerio]
Length = 1400
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 12/125 (9%)
Query: 31 KSWEKEG------LDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGK 84
+ W+K G L ++ VWP T + V + HL + LEE P++ + DPVTG
Sbjct: 376 RQWDKVGNYESGILQMRYPVWP-RYGTFLEPVSDNRHLTVATLEERPFVIVEAVDPVTGT 434
Query: 85 CNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
C ++ V CR +K + + H CC GFCID+L K + + F+Y+L V
Sbjct: 435 C-LSNTVPCR----RQSNKTETIVGHTEPYTKLCCKGFCIDILKKLSRNIKFSYDLYLVT 489
Query: 145 DGKWG 149
+GK G
Sbjct: 490 NGKHG 494
>gi|441644083|ref|XP_003282100.2| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-3 [Nomascus leucogenys]
Length = 1144
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WEHGVLYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + D MA + + CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 433 CRRHSNHTFSSGD--MAPYTK---LCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 486
>gi|449275976|gb|EMC84701.1| Glutamate [NMDA] receptor subunit epsilon-1, partial [Columba
livia]
Length = 1436
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/122 (35%), Positives = 61/122 (50%), Gaps = 14/122 (11%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S P+ HL I LEEAP++ + DP+ C N V
Sbjct: 353 WENNSLSLKYSVWPRYSSFADSD-PDDNHLSIVTLEEAPFVIVEDVDPLMESCQKNT-VP 410
Query: 93 CRV---AGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
CR ++ + I+V +CC GFCID+L K ++ + FTY+L V +GK G
Sbjct: 411 CRKFVRINNSTNEGINVK---------KCCKGFCIDILKKLSKTVKFTYDLYLVTNGKHG 461
Query: 150 TQ 151
+
Sbjct: 462 KK 463
>gi|354466585|ref|XP_003495754.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-3 [Cricetulus
griseus]
Length = 1256
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/119 (37%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ L +K VWP S T Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 432 WDHGVLYMKYPVWPRYS-TSLQPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 489
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + DV CC GFCID+L K A+ + F+Y+L V +GK G +
Sbjct: 490 CRRQSNHTFSSGDVTPYTK-----LCCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKR 543
>gi|602753|gb|AAC42045.1| N-methyl-D-aspartate receptor subunit NR2C [Mus musculus]
Length = 1203
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ L +K VWP S T Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WDHGVLYMKYPVWPRYS-TSLQPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + D+ CC GFCID+L K A+ + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDITPYTK-----LCCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKR 486
>gi|440911269|gb|ELR60961.1| Glutamate [NMDA] receptor subunit epsilon-1, partial [Bos grunniens
mutus]
Length = 1327
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 241 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNT-VP 298
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 299 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 351
>gi|344240787|gb|EGV96890.1| Glutamate [NMDA] receptor subunit epsilon-1 [Cricetulus griseus]
Length = 1307
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 221 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNT-VP 278
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 279 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 331
>gi|327283908|ref|XP_003226682.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2-like [Anolis
carolinensis]
Length = 1500
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 10/121 (8%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP + P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKRLKMKYYVWPRSELYPNCEEREDDHLSIVTLEEAPFVIVENVDPLSGTC-MRNTVP 437
Query: 93 C--RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
C R+ + +K D A+ +CC GFCID+L K ++ + FTY+L V +GK G
Sbjct: 438 CQKRIVSE---NKTDEETAY----IKKCCKGFCIDILKKISKFVKFTYDLYLVTNGKHGK 490
Query: 151 Q 151
+
Sbjct: 491 K 491
>gi|348510189|ref|XP_003442628.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-3-like
[Oreochromis niloticus]
Length = 1414
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 63/126 (50%), Gaps = 14/126 (11%)
Query: 31 KSWEKEG------LDIKDIVWPG-NSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTG 83
+ W+K G L ++ VWP S+ P V + HL + LEE P++ + DPVTG
Sbjct: 379 RQWDKVGTYEMGILQMRYPVWPRFGSYLEP--VSDYRHLTVATLEERPFVIVEAVDPVTG 436
Query: 84 KCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
C N V CR +K + + H CC GFCID+L K + + F+Y+L V
Sbjct: 437 TCVSNT-VPCR----RQSNKTETIVGHTEPYTKLCCKGFCIDILKKLSRTIKFSYDLYLV 491
Query: 144 EDGKWG 149
+GK G
Sbjct: 492 TNGKHG 497
>gi|426258627|ref|XP_004022910.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
zeta-1-like, partial [Ovis aries]
Length = 865
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 14/119 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 506 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 565
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 566 TGPNDT-------SPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQE 617
>gi|301768637|ref|XP_002919741.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1-like,
partial [Ailuropoda melanoleuca]
Length = 1326
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 240 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNT-VP 297
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 298 CR-----KFVKINNS-TNEGVNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 350
>gi|281342652|gb|EFB18236.1| hypothetical protein PANDA_008389 [Ailuropoda melanoleuca]
Length = 1327
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 241 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNT-VP 298
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 299 CR-----KFVKINNS-TNEGVNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 351
>gi|154800426|ref|NP_001081616.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1 isoform 2
precursor [Xenopus laevis]
gi|67043573|gb|AAY63890.1| NMDA receptor subunit splice variant NR1-4a [Xenopus laevis]
Length = 883
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN----MNRGVICRVA 96
+ I+WPG PQG LKI + + P++ + P G C +N I +V
Sbjct: 377 RKIIWPGGETERPQGYQMSTRLKIVTIHQEPFVYVRPTTS-DGTCREEYTINGDPIKKVI 435
Query: 97 GDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
+ + I + QCC GFC+DLL K A E+ FTYE+ V DGK+GTQE +
Sbjct: 436 CNGPNETIP-----GRPTVPQCCYGFCVDLLIKLAREMNFTYEVHLVADGKFGTQERV 488
>gi|410981798|ref|XP_003997253.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-3 [Felis
catus]
Length = 954
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 229 WDHGVLHMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPSTGGCVPNT-VP 286
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + D A CC GFCID+L K A+ + F+Y+L V +GK G +
Sbjct: 287 CRRQSNHTFSSGDTAPYTK-----LCCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKR 340
>gi|225350164|gb|ACN87992.1| N-methyl-D-aspartate receptor subunit NR1-8a [Xenopus laevis]
Length = 866
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN----MNRGVICRVA 96
+ I+WPG PQG LKI + + P++ + P G C +N I +V
Sbjct: 377 RKIIWPGGETERPQGYQMSTRLKIVTIHQEPFVYVRPTTS-DGTCREEYTINGDPIKKVI 435
Query: 97 GDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
+ + I + QCC GFC+DLL K A E+ FTYE+ V DGK+GTQE +
Sbjct: 436 CNGPNETIP-----GRPTVPQCCYGFCVDLLIKLAREMNFTYEVHLVADGKFGTQERV 488
>gi|432871609|ref|XP_004071999.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2-like
[Oryzias latipes]
Length = 1686
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP E HL I LEEAP++ + DP++G C M V
Sbjct: 434 WENGSLSMKYHVWPRFELYGGAANREDDHLSIVTLEEAPFVIVEDVDPLSGTC-MRNTVP 492
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + KI+ +CC GFCID+L K A+++ FTY+L V +GK G +
Sbjct: 493 CR----KQIKKIN-ETKESGIYIKRCCKGFCIDILKKIAKQVKFTYDLYLVTNGKHGKK 546
>gi|426239295|ref|XP_004013561.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-3 [Ovis aries]
Length = 983
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 360 WDHGVLHMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 417
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + D A CC GFCID+L K A+ + F+Y+L V +GK G +
Sbjct: 418 CRRQSNHTFSSGDAAPYTK-----LCCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKR 471
>gi|225350162|gb|ACN87991.1| N-methyl-D-aspartate receptor subunit NR1-4b [Xenopus laevis]
Length = 904
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN----MNRGVICRVA 96
+ I+WPG PQG LKI + + P++ + P G C +N I +V
Sbjct: 398 RKIIWPGGETERPQGYQMSTRLKIVTIHQEPFVYVRPTTS-DGTCREEYTINGDPIKKVI 456
Query: 97 GDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
+ + I + QCC GFC+DLL K A E+ FTYE+ V DGK+GTQE +
Sbjct: 457 CNGPNETIP-----GRPTVPQCCYGFCVDLLIKLAREMNFTYEVHLVADGKFGTQERV 509
>gi|225350158|gb|ACN87989.1| N-methyl-D-aspartate receptor subunit NR1-3a [Xenopus laevis]
Length = 920
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN----MNRGVICRVA 96
+ I+WPG PQG LKI + + P++ + P G C +N I +V
Sbjct: 377 RKIIWPGGETERPQGYQMSTRLKIVTIHQEPFVYVRPTTS-DGTCREEYTINGDPIKKVI 435
Query: 97 GDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
+ + I + QCC GFC+DLL K A E+ FTYE+ V DGK+GTQE +
Sbjct: 436 CNGPNETIP-----GRPTVPQCCYGFCVDLLIKLAREMNFTYEVHLVADGKFGTQERV 488
>gi|75709202|ref|NP_034480.2| glutamate receptor ionotropic, NMDA 2C precursor [Mus musculus]
gi|1352507|sp|Q01098.2|NMDE3_MOUSE RecName: Full=Glutamate receptor ionotropic, NMDA 2C; Short=GluN2C;
AltName: Full=Glutamate [NMDA] receptor subunit
epsilon-3; AltName: Full=N-methyl D-aspartate receptor
subtype 2C; Short=NMDAR2C; Short=NR2C; Flags: Precursor
gi|538240|dbj|BAA01536.1| glutamate receptor channel subunit epsilon 3 [Mus musculus]
gi|148702523|gb|EDL34470.1| glutamate receptor, ionotropic, NMDA2C (epsilon 3) [Mus musculus]
gi|187953715|gb|AAI37850.1| Grin2c protein [Mus musculus]
Length = 1239
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ L +K VWP S T Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WDHGVLYMKYPVWPRYS-TSLQPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + D+ CC GFCID+L K A+ + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDITPYTK-----LCCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKR 486
>gi|225350160|gb|ACN87990.1| N-methyl-D-aspartate receptor subunit NR1-3b [Xenopus laevis]
Length = 941
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN----MNRGVICRVA 96
+ I+WPG PQG LKI + + P++ + P G C +N I +V
Sbjct: 398 RKIIWPGGETERPQGYQMSTRLKIVTIHQEPFVYVRPTTS-DGTCREEYTINGDPIKKVI 456
Query: 97 GDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
+ + I + QCC GFC+DLL K A E+ FTYE+ V DGK+GTQE +
Sbjct: 457 CNGPNETIP-----GRPTVPQCCYGFCVDLLIKLAREMNFTYEVHLVADGKFGTQERV 509
>gi|348505192|ref|XP_003440145.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 3
[Oreochromis niloticus]
Length = 880
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 18/138 (13%)
Query: 25 ICIGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGK 84
I +G++ + + + I+WPG PQG LKI + + P++ + P P G
Sbjct: 358 IQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVTIHQEPFVYVKPTLP-DGT 416
Query: 85 CN--------MNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGF 136
C + + VIC + + V QCC GFC+DLL K A + F
Sbjct: 417 CKEEMTLNGVLIKKVICTGPNETIPGRPIVP---------QCCYGFCVDLLIKLAMTMNF 467
Query: 137 TYELVRVEDGKWGTQEDL 154
TYE+ V DGK+GTQE +
Sbjct: 468 TYEVHLVADGKFGTQERV 485
>gi|301605119|ref|XP_002932208.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2-like
[Xenopus (Silurana) tropicalis]
Length = 1360
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 66/141 (46%), Gaps = 14/141 (9%)
Query: 17 HPTIFTSGICIGVWKSWEKEG------LDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEA 70
HP + I + + WE+ G L +K VWP P + HL I LEEA
Sbjct: 354 HPKLVI--ILLNQQRKWERVGKYKDRSLKMKYYVWPVFELYPNSEEHKDEHLSIVTLEEA 411
Query: 71 PYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKF 130
P++ + DP++G C M V CR + + +CC GFCID+L K
Sbjct: 412 PFVIVEDVDPLSGTC-MRNTVPCR-----KQIRTENRTEEGGNYIKRCCKGFCIDILKKI 465
Query: 131 AEELGFTYELVRVEDGKWGTQ 151
A+ + FTY+L V +GK G +
Sbjct: 466 AKTVKFTYDLYLVTNGKHGKK 486
>gi|225350166|gb|ACN87993.1| N-methyl-D-aspartate receptor subunit NR1-8b [Xenopus laevis]
Length = 887
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN----MNRGVICRVA 96
+ I+WPG PQG LKI + + P++ + P G C +N I +V
Sbjct: 398 RKIIWPGGETERPQGYQMSTRLKIVTIHQEPFVYVRPTTS-DGTCREEYTINGDPIKKVI 456
Query: 97 GDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
+ + I + QCC GFC+DLL K A E+ FTYE+ V DGK+GTQE +
Sbjct: 457 CNGPNETIP-----GRPTVPQCCYGFCVDLLIKLAREMNFTYEVHLVADGKFGTQERV 509
>gi|154800424|ref|NP_001081615.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1 isoform 1
precursor [Xenopus laevis]
gi|1122392|emb|CAA63871.1| NMDA glutamate receptor subunit [Xenopus laevis]
gi|1129175|emb|CAA63825.1| NMDA glutamate receptor subunit [Xenopus laevis]
Length = 904
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN----MNRGVICRVA 96
+ I+WPG PQG LKI + + P++ + P G C +N I +V
Sbjct: 398 RKIIWPGGETERPQGYQMSTRLKIVTIHQEPFVYVRPTTS-DGTCREEYTINGDPIKKVI 456
Query: 97 GDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
+ + I + QCC GFC+DLL K A E+ FTYE+ V DGK+GTQE +
Sbjct: 457 CNGPNETIP-----GRPTVPQCCYGFCVDLLIKLAREMNFTYEVHLVADGKFGTQERV 509
>gi|348511418|ref|XP_003443241.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2-like
[Oreochromis niloticus]
Length = 1700
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP E HL I LEEAP++ + DP++G C M V
Sbjct: 450 WENGSLSMKYHVWPRYELYGGPANREDDHLSIVTLEEAPFVIVEDVDPLSGTC-MRNTVP 508
Query: 93 CRVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
CR +I Y +CC GFCID+L K A+ + FTY+L V +GK G
Sbjct: 509 CR-------KQIKSVNQTKESGIYIKRCCKGFCIDILKKIAKSVKFTYDLYLVTNGKHGK 561
Query: 151 Q 151
+
Sbjct: 562 K 562
>gi|432867415|ref|XP_004071180.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-3-like
[Oryzias latipes]
Length = 1373
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 31 KSWEKEG------LDIKDIVWPG-NSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTG 83
+ W+K G L ++ VWP S+ P V + HL + LEE P++ + DP TG
Sbjct: 376 RQWDKVGTYEVGILQMRYPVWPRFGSYLEP--VSDYRHLTVATLEERPFVIVEAVDPATG 433
Query: 84 KCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
C N V CR +K + + H CC GFCID+L K A + F+Y+L V
Sbjct: 434 TCVSNT-VPCR----RQSNKTETIVGHTEPYTKLCCKGFCIDILKKLARTIKFSYDLYLV 488
Query: 144 EDGKWG 149
+GK G
Sbjct: 489 TNGKHG 494
>gi|228951|prf||1814459B D-MeAsp receptor:ISOTYPE=epsilon3
Length = 1239
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ L +K VWP S T Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WDHGVLYMKYPVWPRYS-TSLQPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + D+ CC GFCID+L K A+ + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDITPYTK-----LCCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKR 486
>gi|348505188|ref|XP_003440143.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 1
[Oreochromis niloticus]
Length = 901
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 18/138 (13%)
Query: 25 ICIGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGK 84
I +G++ + + + I+WPG PQG LKI + + P++ + P P G
Sbjct: 379 IQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVTIHQEPFVYVKPTLP-DGT 437
Query: 85 CN--------MNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGF 136
C + + VIC + + V QCC GFC+DLL K A + F
Sbjct: 438 CKEEMTLNGVLIKKVICTGPNETIPGRPIVP---------QCCYGFCVDLLIKLAMTMNF 488
Query: 137 TYELVRVEDGKWGTQEDL 154
TYE+ V DGK+GTQE +
Sbjct: 489 TYEVHLVADGKFGTQERV 506
>gi|431910437|gb|ELK13509.1| Glutamate [NMDA] receptor subunit epsilon-1 [Pteropus alecto]
Length = 1118
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 32 WENHTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNT-VP 89
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 90 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 142
>gi|285348|pir||C43274 N-methyl D-aspartate receptor (NMDR) glutamate-gated ion channels
subtype NR2C - rat
Length = 962
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ L +K VWP S T Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WDHGVLYMKYPVWPRYS-TSLQPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + D+ CC GFCID+L K A+ + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDLTPYTK-----LCCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKR 486
>gi|359320253|ref|XP_540421.4| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-3 [Canis lupus familiaris]
Length = 1220
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WDHGVLHMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + D A CC GFCID+L K A+ + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDTAPYTK-----LCCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKR 486
>gi|291226544|ref|XP_002733260.1| PREDICTED: Glutamate [NMDA] receptor subunit epsilon-2-like
[Saccoglossus kowalevskii]
Length = 1752
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 18/129 (13%)
Query: 29 VWKS---WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKC 85
+WK W+ +D+ +I W GN P G + HL+I + E P++ + P + V C
Sbjct: 1171 IWKKVGMWKNGTVDVGEIEWMGNPELSPTGFTHRKHLRIVTIVEEPFVTIVPYEQVNVTC 1230
Query: 86 NMNRGVIC-RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
G+ C R+ G E +CCSG+C+DLL + +LGFTY++ VE
Sbjct: 1231 QA--GIACSRLDGTT------------GEVITECCSGYCMDLLKMISRDLGFTYDIYIVE 1276
Query: 145 DGKWGTQED 153
D +G D
Sbjct: 1277 DNLYGVVFD 1285
>gi|348505194|ref|XP_003440146.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 4
[Oreochromis niloticus]
Length = 964
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 18/138 (13%)
Query: 25 ICIGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGK 84
I +G++ + + + I+WPG PQG LKI + + P++ + P P G
Sbjct: 379 IQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVTIHQEPFVYVKPTLP-DGT 437
Query: 85 CN--------MNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGF 136
C + + VIC + + V QCC GFC+DLL K A + F
Sbjct: 438 CKEEMTLNGVLIKKVICTGPNETIPGRPIVP---------QCCYGFCVDLLIKLAMTMNF 488
Query: 137 TYELVRVEDGKWGTQEDL 154
TYE+ V DGK+GTQE +
Sbjct: 489 TYEVHLVADGKFGTQERV 506
>gi|348505190|ref|XP_003440144.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 2
[Oreochromis niloticus]
Length = 938
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 18/138 (13%)
Query: 25 ICIGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGK 84
I +G++ + + + I+WPG PQG LKI + + P++ + P P G
Sbjct: 379 IQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVTIHQEPFVYVKPTLP-DGT 437
Query: 85 CN--------MNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGF 136
C + + VIC + + V QCC GFC+DLL K A + F
Sbjct: 438 CKEEMTLNGVLIKKVICTGPNETIPGRPIVP---------QCCYGFCVDLLIKLAMTMNF 488
Query: 137 TYELVRVEDGKWGTQEDL 154
TYE+ V DGK+GTQE +
Sbjct: 489 TYEVHLVADGKFGTQERV 506
>gi|395844220|ref|XP_003794860.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 2
[Otolemur garnettii]
Length = 885
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICR----VA 96
+ I+WPG P+G LKI + + P++ + P M+ G CR V
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKP--------TMSDGT-CREEFTVN 427
Query: 97 GDADMDKI-----DVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GD I D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQ
Sbjct: 428 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQ 487
Query: 152 EDL 154
E +
Sbjct: 488 ERV 490
>gi|47217954|emb|CAG02237.1| unnamed protein product [Tetraodon nigroviridis]
Length = 968
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 63/126 (50%), Gaps = 14/126 (11%)
Query: 31 KSWEKEG------LDIKDIVWPG-NSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTG 83
+ W+K G L ++ VWP S+ P V + HL + LEE P++ + DPVTG
Sbjct: 363 RQWDKVGTYETGILQMRYPVWPRYGSYLQP--VSDYRHLTVATLEERPFVIVEAVDPVTG 420
Query: 84 KCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
C N V CR +K + + H CC GFCID+L K + + F+Y+L V
Sbjct: 421 TCVSNT-VPCR----RQSNKTEAIVGHTEPYTKLCCKGFCIDILKKLSRNIKFSYDLYLV 475
Query: 144 EDGKWG 149
+GK G
Sbjct: 476 TNGKHG 481
>gi|548374|sp|Q00961.1|NMDE3_RAT RecName: Full=Glutamate receptor ionotropic, NMDA 2C; Short=GluN2C;
AltName: Full=Glutamate [NMDA] receptor subunit
epsilon-3; AltName: Full=N-methyl D-aspartate receptor
subtype 2C; Short=NMDAR2C; Short=NR2C; Flags: Precursor
gi|205735|gb|AAA41713.1| NMDA receptor subtype 2C [Rattus norvegicus]
Length = 1237
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ L +K VWP S T Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WDHGVLYMKYPVWPRYS-TSLQPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + D+ CC GFCID+L K A+ + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDLTPYTK-----LCCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKR 486
>gi|395844222|ref|XP_003794861.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 3
[Otolemur garnettii]
Length = 943
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICR----VA 96
+ I+WPG P+G LKI + + P++ + P M+ G CR V
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKP--------TMSDGT-CREEFTVN 448
Query: 97 GDADMDKI-----DVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GD I D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQ
Sbjct: 449 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQ 508
Query: 152 EDL 154
E +
Sbjct: 509 ERV 511
>gi|475550|gb|AAA17832.1| N-methyl-D-aspartate receptor NMDAR2C subunit [Rattus norvegicus]
Length = 1250
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ L +K VWP S T Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 388 WDHGVLYMKYPVWPRYS-TSLQPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 445
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + D+ CC GFCID+L K A+ + F+Y+L V +GK G +
Sbjct: 446 CRRQSNHTFSSGDLTPYTK-----LCCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKR 499
>gi|148747563|ref|NP_036707.3| glutamate receptor ionotropic, NMDA 2C [Rattus norvegicus]
gi|286236|dbj|BAA02499.1| N-methyl-D-aspartate receptor subunit [Rattus norvegicus]
gi|149054750|gb|EDM06567.1| glutamate receptor, ionotropic, NMDA2C, isoform CRA_a [Rattus
norvegicus]
gi|149054751|gb|EDM06568.1| glutamate receptor, ionotropic, NMDA2C, isoform CRA_a [Rattus
norvegicus]
Length = 1250
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ L +K VWP S T Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 388 WDHGVLYMKYPVWPRYS-TSLQPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 445
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + D+ CC GFCID+L K A+ + F+Y+L V +GK G +
Sbjct: 446 CRRQSNHTFSSGDLTPYTK-----LCCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKR 499
>gi|126344912|ref|XP_001381934.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-4-like,
partial [Monodelphis domestica]
Length = 534
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
+WE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 401 TWEQQSLRLKYPLWSRYGRFL-QPVDDTQHLMVATLEERPFVIVEPADPLSGTC-IRDSV 458
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR ++ A E +CC GFCID+L + A+ +GF+Y+L V +GK G +
Sbjct: 459 PCR--SQLNLTHSPPPDAPRPEK--RCCKGFCIDILKRLAQTIGFSYDLNLVTNGKHGKK 514
Query: 152 ED 153
D
Sbjct: 515 ID 516
>gi|395844218|ref|XP_003794859.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 1
[Otolemur garnettii]
Length = 938
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICR----VA 96
+ I+WPG P+G LKI + + P++ + P M+ G CR V
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKP--------TMSDGT-CREEFTVN 427
Query: 97 GDADMDKI-----DVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GD I D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQ
Sbjct: 428 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQ 487
Query: 152 EDL 154
E +
Sbjct: 488 ERV 490
>gi|395844226|ref|XP_003794863.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 5
[Otolemur garnettii]
Length = 901
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICR----VA 96
+ I+WPG P+G LKI + + P++ + P M+ G CR V
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKP--------TMSDGT-CREEFTVN 427
Query: 97 GDADMDKI-----DVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GD I D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQ
Sbjct: 428 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQ 487
Query: 152 EDL 154
E +
Sbjct: 488 ERV 490
>gi|291226550|ref|XP_002733263.1| PREDICTED: ionotropic glutamate receptor NMDA2 [Saccoglossus
kowalevskii]
Length = 1011
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 29 VWKS---WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKC 85
WK W+ + + ++W G +H P+G+ H++ T + E P++ P +
Sbjct: 335 TWKEVGYWQDNNMTMATVLWIGGTHEAPKGLSPHRHMRFTTIVEEPFVLTIPLE------ 388
Query: 86 NMNRGVICRVAGDADMDKIDVAMAHHNESFY-QCCSGFCIDLLGKFAEELGFTYELVRVE 144
V+C K V NE+ +CC GFCI LL K E++GFTYEL V+
Sbjct: 389 --KNEVVC---------KYGVKCGEKNETTRGKCCLGFCISLLEKLKEDIGFTYELRLVD 437
Query: 145 DGKWGTQ 151
DG +G +
Sbjct: 438 DGNYGAK 444
>gi|395844224|ref|XP_003794862.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 4
[Otolemur garnettii]
Length = 906
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICR----VA 96
+ I+WPG P+G LKI + + P++ + P M+ G CR V
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKP--------TMSDGT-CREEFTVN 448
Query: 97 GDADMDKI-----DVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GD I D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQ
Sbjct: 449 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQ 508
Query: 152 EDL 154
E +
Sbjct: 509 ERV 511
>gi|99083467|gb|ABC71923.1| NMDA receptor subunit NR1b [Oreochromis mossambicus]
Length = 859
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 18/138 (13%)
Query: 25 ICIGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGK 84
I +G++ + + + I+WPG PQG LKI + + P++ + P P G
Sbjct: 274 IQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVTIHQEPFVYVKPTLP-DGT 332
Query: 85 CN--------MNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGF 136
C + + VIC + + V QCC GFC+DLL K A + F
Sbjct: 333 CKEEMTLNGVLIKKVICTGPNETIPGRPIVP---------QCCYGFCVDLLIKLAMTMNF 383
Query: 137 TYELVRVEDGKWGTQEDL 154
TYE+ V DGK+GTQE +
Sbjct: 384 TYEVHLVADGKFGTQERV 401
>gi|156572215|gb|ABU84985.1| ionotropic glutamate receptor subunit NR2A [Xenopus laevis]
Length = 121
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L++K VWP + + P+ HL I LEEAP++ + D +TG C N V
Sbjct: 10 WENKSLNMKYPVWPRITASADTD-PDDNHLSIVTLEEAPFVIVENVDYLTGTCVRN-TVP 67
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + + S +CC GFCID+L K ++ + FTY+L V +GK G +
Sbjct: 68 CRKYFRLNNSTTE------GTSVKKCCKGFCIDILKKLSKTVKFTYDLYLVTNGKHGKK 120
>gi|283462252|gb|ADB22420.1| ionotropic glutamate receptor NMDA2 [Saccoglossus kowalevskii]
Length = 722
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 29 VWKS---WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKC 85
WK W+ + + ++W G +H P+G+ H++ T + E P++ P +
Sbjct: 46 TWKEVGYWQDNNMTMATVLWIGGTHEAPKGLSPHRHMRFTTIVEEPFVLTIPLEK----- 100
Query: 86 NMNRGVICRVAGDADMDKIDVAMAHHNESFY-QCCSGFCIDLLGKFAEELGFTYELVRVE 144
V+C K V NE+ +CC GFCI LL K E++GFTYEL V+
Sbjct: 101 ---NEVVC---------KYGVKCGEKNETTRGKCCLGFCISLLEKLKEDIGFTYELRLVD 148
Query: 145 DGKWGTQ 151
DG +G +
Sbjct: 149 DGNYGAK 155
>gi|351704142|gb|EHB07061.1| Glutamate [NMDA] receptor subunit epsilon-2, partial
[Heterocephalus glaber]
Length = 1334
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP S P E HL I LEEAP++ + DP++G C M V
Sbjct: 242 WKDKSLQMKYYVWPRMS--PETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 298
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 299 CQKRIISENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 349
Query: 149 GTQ 151
G +
Sbjct: 350 GKK 352
>gi|334690603|gb|AEG80141.1| NMDA receptor [Xiphophorus nigrensis]
Length = 738
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 20/139 (14%)
Query: 25 ICIGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGK 84
+ +G++ + + + I+WPG PQG LKI + + P++ + P G
Sbjct: 236 VQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVTIHQEPFVYVKPTMQ-DGT 294
Query: 85 CNMNR---GVICRVAGDADMDKIDVAMAHHNESFY------QCCSGFCIDLLGKFAEELG 135
CN + GVI + V NE+ QCC GFC+DLL K A +
Sbjct: 295 CNEEKALNGVIIK----------KVICTGPNETIPGRPIVPQCCYGFCVDLLIKLAMTMN 344
Query: 136 FTYELVRVEDGKWGTQEDL 154
FTYE+ V DGK+GTQE +
Sbjct: 345 FTYEVHLVADGKFGTQERV 363
>gi|332634684|ref|NP_001193823.1| glutamate [NMDA] receptor subunit epsilon-3 precursor [Bos taurus]
gi|296476034|tpg|DAA18149.1| TPA: glutamate receptor, ionotropic, NMDA2C (epsilon 3)-like [Bos
taurus]
Length = 1228
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WDHGILHMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + D A CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDAAPYTK-----LCCKGFCIDILKKLARVVRFSYDLYLVTNGKHGKR 486
>gi|190358411|ref|NP_001121809.1| glutamate [NMDA] receptor subunit epsilon-2 [Danio rerio]
Length = 1770
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP E HL I LEEAP++ + DP++G C M V
Sbjct: 456 WENGSLAMKYHVWPRFELYSDAEEREDDHLSIVTLEEAPFVIVEDVDPLSGTC-MRNTVP 514
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR K+ +CC GFCID+L K A+ + FTY+L V +GK G +
Sbjct: 515 CR-----KQLKLQNLTGDSGIYIKRCCKGFCIDILKKIAKSVKFTYDLYLVTNGKHGKK 568
>gi|260825574|ref|XP_002607741.1| hypothetical protein BRAFLDRAFT_82812 [Branchiostoma floridae]
gi|229293090|gb|EEN63751.1| hypothetical protein BRAFLDRAFT_82812 [Branchiostoma floridae]
Length = 398
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 28 GVWKSWEKEGLDIK--DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKC 85
G+ + KE + I I+WPG P+G LK +E P+I + G C
Sbjct: 281 GLTTMFGKENIKINGDQIIWPGGETKRPEGFNISTRLKTVTIEMHPFIYVLDAQR-DGSC 339
Query: 86 NMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVED 145
+ V C V D + N QCC GFCI+LL + A++L FTY++ V+D
Sbjct: 340 R-EKQVPCLVPNDTNYGS--------NAGEMQCCEGFCINLLKQLAQKLNFTYDVHLVKD 390
Query: 146 GKWGTQE 152
GK+GTQE
Sbjct: 391 GKFGTQE 397
>gi|148664885|gb|EDK97301.1| mCG123867, isoform CRA_a [Mus musculus]
Length = 1097
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNT-VP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|301619705|ref|XP_002939231.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-1-like [Xenopus (Silurana) tropicalis]
Length = 1467
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L++K VWP + + P+ HL I LEEAP++ + D +TG C N V
Sbjct: 370 WENKSLNMKYPVWPRITASLDSD-PDDNHLSIVTLEEAPFVIVENVDYLTGTCVRN-TVP 427
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + + S +CC GFCID+L K ++ + FTY+L V +GK G +
Sbjct: 428 CRKYFRLNNSTTE------GTSVKKCCKGFCIDILKKLSKTVKFTYDLYLVTNGKHGKK 480
>gi|224070013|ref|XP_002194954.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1 [Taeniopygia
guttata]
Length = 1458
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 60/121 (49%), Gaps = 12/121 (9%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S + P+ HL I LEEAP++ + DP+ C N V
Sbjct: 375 WENNSLSLKYSVWPRYS-SFADSDPDDNHLSIVTLEEAPFVIVEDVDPLMESCQKN-TVP 432
Query: 93 CRVAGDADMDKIDVAMAHHNE--SFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
CR K NE + +CC GFCID+L K ++ + FTY+L V +GK G
Sbjct: 433 CR--------KFVRLNNKTNEGTNVKKCCKGFCIDILKKLSKTVKFTYDLYLVTNGKHGK 484
Query: 151 Q 151
+
Sbjct: 485 K 485
>gi|73959181|ref|XP_547132.2| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1 [Canis lupus
familiaris]
Length = 1464
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENQSLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|431899042|gb|ELK07412.1| Glutamate [NMDA] receptor subunit zeta-1 [Pteropus alecto]
Length = 878
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 353 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 412
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D A H + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 413 TGPNDTSPGS-----ARH--TVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 465
Query: 154 L 154
+
Sbjct: 466 V 466
>gi|410963876|ref|XP_003988485.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2 [Felis
catus]
Length = 1486
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIVSENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|149409239|ref|XP_001506052.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1-like
[Ornithorhynchus anatinus]
Length = 1465
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP S + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 376 WENKSLSLRHSVWPRFS-SFVDSDPDDNHLSIVTLEEAPFVIVEDMDPLTETCVRN-TVP 433
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR +I+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 434 CR-----KFVRINNS-TNEGTNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 486
>gi|410985219|ref|XP_003998921.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1 [Felis
catus]
Length = 1464
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENQSLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|194211740|ref|XP_001501691.2| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2 [Equus
caballus]
Length = 1483
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIVSENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|160420145|ref|NP_001104191.1| ionotropic glutamate receptor subunit NR2B precursor [Xenopus
laevis]
gi|156572223|gb|ABU84989.1| ionotropic glutamate receptor subunit NR2B [Xenopus laevis]
Length = 1448
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 66/141 (46%), Gaps = 14/141 (9%)
Query: 17 HPTIFTSGICIGVWKSWEKEG------LDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEA 70
HP + I + + WE+ G L +K VWP P + HL I LEEA
Sbjct: 354 HPKLVI--ILLNQERKWERVGKYKDRSLKMKYYVWPVFDLYPNSEEHKDEHLSIVTLEEA 411
Query: 71 PYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKF 130
P++ + DP++G C M V CR + + +CC GFCID+L K
Sbjct: 412 PFVIVEDVDPLSGTC-MRNTVPCR-----KQIRPENRTEEGGNYIKRCCKGFCIDILKKI 465
Query: 131 AEELGFTYELVRVEDGKWGTQ 151
A+ + FTY+L V +GK G +
Sbjct: 466 AKTVKFTYDLYLVTNGKHGKK 486
>gi|56790284|ref|NP_001008719.1| glutamate receptor ionotropic, NMDA 2B precursor [Canis lupus
familiaris]
gi|75040876|sp|Q5R1P3.1|NMDE2_CANFA RecName: Full=Glutamate receptor ionotropic, NMDA 2B; Short=GluN2B;
AltName: Full=Glutamate [NMDA] receptor subunit
epsilon-2; AltName: Full=N-methyl D-aspartate receptor
subtype 2B; Short=NMDAR2B; Short=NR2B; Flags: Precursor
gi|56378327|dbj|BAD74215.1| N-methyl-D-aspartate receptor subunit 2B [Canis lupus familiaris]
Length = 1485
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIVSENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|338711659|ref|XP_001916896.2| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-3-like [Equus caballus]
Length = 1215
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ L +K VWP S + Q V + HL + LEE P++ + PDP +G C N V
Sbjct: 375 WDHGILHMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGSGSCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + D A CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDAAPYTK-----LCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 486
>gi|335288428|ref|XP_003355615.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2 [Sus scrofa]
Length = 1484
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIVSENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|344292112|ref|XP_003417772.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1-like
[Loxodonta africana]
Length = 1464
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|301768919|ref|XP_002919918.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-3-like
[Ailuropoda melanoleuca]
Length = 1038
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ L +K VWP S + Q V + H+ + LEE P++ + PDP TG C N V
Sbjct: 366 WDHGVLHMKYPVWPRYSASL-QPVMDSRHVTVATLEERPFVIVESPDPGTGGCVPNT-VP 423
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + D A CC GFCID+L K A+ + F+Y+L V +GK G +
Sbjct: 424 CRRHSNHTFSSSDTAPYTK-----LCCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKR 477
>gi|41680705|ref|NP_032196.2| glutamate receptor ionotropic, NMDA 2A precursor [Mus musculus]
gi|50403739|sp|P35436.2|NMDE1_MOUSE RecName: Full=Glutamate receptor ionotropic, NMDA 2A; Short=GluN2A;
AltName: Full=Glutamate [NMDA] receptor subunit
epsilon-1; AltName: Full=N-methyl D-aspartate receptor
subtype 2A; Short=NMDAR2A; Short=NR2A; Flags: Precursor
gi|41529302|dbj|BAA01069.2| N-methyl-D-aspartate receptor channel subunit epsilon 1 [Mus
musculus]
gi|148921954|gb|AAI46290.1| Glutamate receptor, ionotropic, NMDA2A (epsilon 1) [synthetic
construct]
gi|151555555|gb|AAI48801.1| Glutamate receptor, ionotropic, NMDA2A (epsilon 1) [synthetic
construct]
Length = 1464
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|395506547|ref|XP_003757593.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 3
[Sarcophilus harrisii]
Length = 885
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPP---DPVTGKCNMNRGVICRVAG 97
+ I+WPG P+G LKI + + P++ + P + +N I +V
Sbjct: 377 RKIIWPGGETEKPEGYEMSTRLKIVTIHQEPFVYVKPALDGETCNEDLTINGEKIKKVTC 436
Query: 98 DADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
D A H + QCC GFCIDLL A+ + FTYE+ V DGK+GTQE +
Sbjct: 437 TGPNDTHPGANRH---TILQCCYGFCIDLLIDLAKTMNFTYEVHLVADGKFGTQERV 490
>gi|334348311|ref|XP_003342043.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-2-like [Monodelphis domestica]
Length = 1462
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 12/121 (9%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RVCPETEEREDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
C R+ + D+ + +CC GFCID+L K ++ + FTY+L V +GK G
Sbjct: 436 CQKRIVTENKTDE-------EPDYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKHGK 488
Query: 151 Q 151
+
Sbjct: 489 K 489
>gi|395747464|ref|XP_002826155.2| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1 [Pongo
abelii]
Length = 1124
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 221 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 278
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 279 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 331
>gi|395538697|ref|XP_003771311.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2 [Sarcophilus
harrisii]
Length = 1491
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 12/121 (9%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKNLQMKYYVWP--RVCPETEEREDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
C R+ + D+ + +CC GFCID+L K ++ + FTY+L V +GK G
Sbjct: 436 CQKRIVTENKTDE-------EPDYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKHGK 488
Query: 151 Q 151
+
Sbjct: 489 K 489
>gi|426254290|ref|XP_004020812.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-1 [Ovis aries]
Length = 1445
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 360 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 417
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 418 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 470
>gi|140971205|ref|NP_036705.3| glutamate receptor ionotropic, NMDA 2A precursor [Rattus
norvegicus]
gi|149042599|gb|EDL96236.1| rCG49797, isoform CRA_b [Rattus norvegicus]
Length = 1464
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|2155310|gb|AAB58801.1| N-methyl-D-aspartate receptor NMDAR2A subunit [Rattus norvegicus]
Length = 1464
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|47212216|emb|CAF94983.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1223
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 55/120 (45%), Gaps = 18/120 (15%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN--------MNRGVI 92
+ I+WPG P G LKI + + P++ + P P G C + + VI
Sbjct: 638 RKIIWPGGELEKPVGYQMSTKLKIVTIHQEPFVYVKPTKP-DGTCTEEYTVNGVLIKKVI 696
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
C + V QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 697 CTGPNGTIPGQPIVP---------QCCYGFCIDLLIKLAMSMNFTYEVHLVADGKFGTQE 747
>gi|348584074|ref|XP_003477797.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1-like [Cavia
porcellus]
Length = 1462
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|3915771|sp|Q00959.2|NMDE1_RAT RecName: Full=Glutamate receptor ionotropic, NMDA 2A; Short=GluN2A;
AltName: Full=Glutamate [NMDA] receptor subunit
epsilon-1; AltName: Full=N-methyl D-aspartate receptor
subtype 2A; Short=NMDAR2A; Short=NR2A; Flags: Precursor
gi|2905806|gb|AAC03565.1| NMDA receptor subtype 2A [Rattus norvegicus]
Length = 1464
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|390471279|ref|XP_002755928.2| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1 isoform 1
[Callithrix jacchus]
Length = 1464
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|354467934|ref|XP_003496422.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1 [Cricetulus
griseus]
Length = 1464
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|344249584|gb|EGW05688.1| Glutamate [NMDA] receptor subunit epsilon-2 [Cricetulus griseus]
Length = 1373
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 238 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 294
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 295 CQKRIISENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 345
Query: 149 GTQ 151
G +
Sbjct: 346 GKK 348
>gi|344266648|ref|XP_003405392.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-2-like [Loxodonta africana]
Length = 1413
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIISENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|291390575|ref|XP_002711833.1| PREDICTED: glutamate receptor, ionotropic, NMDA2A (epsilon 1)-like
[Oryctolagus cuniculus]
Length = 1390
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|403295751|ref|XP_003938792.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1-like
[Saimiri boliviensis boliviensis]
Length = 1464
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|301630765|ref|XP_002944487.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2-like,
partial [Xenopus (Silurana) tropicalis]
Length = 220
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
++ L +K VWP P + HL I LEEAP++ + DP++G C M V
Sbjct: 4 YKDRSLKMKYYVWPVFELYPNSEEHKDEHLSIVTLEEAPFVIVEDVDPLSGTC-MRNTVP 62
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + + +CC GFCID+L K A+ + FTY+L V +GK G +
Sbjct: 63 CR-----KQIRTENRTEEGGNYIKRCCKGFCIDILKKIAKTVKFTYDLYLVTNGKHGKK 116
>gi|286234|dbj|BAA02498.1| N-methyl-D-aspartate receptor subunit [Rattus norvegicus]
Length = 1464
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|395506549|ref|XP_003757594.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 4
[Sarcophilus harrisii]
Length = 906
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPP---DPVTGKCNMNRGVICRVAG 97
+ I+WPG P+G LKI + + P++ + P + +N I +V
Sbjct: 398 RKIIWPGGETEKPEGYEMSTRLKIVTIHQEPFVYVKPALDGETCNEDLTINGEKIKKVTC 457
Query: 98 DADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
D A H + QCC GFCIDLL A+ + FTYE+ V DGK+GTQE +
Sbjct: 458 TGPNDTHPGANRH---TILQCCYGFCIDLLIDLAKTMNFTYEVHLVADGKFGTQERV 511
>gi|338712853|ref|XP_001917100.2| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-1-like [Equus caballus]
Length = 1466
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 376 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 433
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 434 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 486
>gi|56122250|gb|AAV74276.1| glutamate receptor ionotropic N-methyl-D-aspartate subunit 2A
[Saimiri boliviensis]
Length = 1388
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 302 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 359
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 360 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 412
>gi|228950|prf||1814459A D-MeAsp receptor:SUBUNIT=epsilon2
Length = 1482
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIISENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|560547|gb|AAB60368.1| N-methyl-D-aspartate receptor subunit NR3 [Homo sapiens]
gi|1093950|prf||2105191A D-MeAsp receptor:SUBUNIT=NR3
Length = 1484
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIVTENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|14549168|sp|Q01097.3|NMDE2_MOUSE RecName: Full=Glutamate receptor ionotropic, NMDA 2B; Short=GluN2B;
AltName: Full=Glutamate [NMDA] receptor subunit
epsilon-2; AltName: Full=N-methyl D-aspartate receptor
subtype 2B; Short=NMDAR2B; Short=NR2B; Flags: Precursor
gi|41529278|dbj|BAA01498.2| glutamate receptor channel subunit epsilon 2 [Mus musculus]
Length = 1482
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIISENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|395506545|ref|XP_003757592.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 2
[Sarcophilus harrisii]
Length = 922
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPP---DPVTGKCNMNRGVICRVAG 97
+ I+WPG P+G LKI + + P++ + P + +N I +V
Sbjct: 377 RKIIWPGGETEKPEGYEMSTRLKIVTIHQEPFVYVKPALDGETCNEDLTINGEKIKKVTC 436
Query: 98 DADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
D A H + QCC GFCIDLL A+ + FTYE+ V DGK+GTQE +
Sbjct: 437 TGPNDTHPGANRH---TILQCCYGFCIDLLIDLAKTMNFTYEVHLVADGKFGTQERV 490
>gi|114643713|ref|XP_528744.2| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2 [Pan
troglodytes]
gi|397491188|ref|XP_003816555.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2 [Pan
paniscus]
Length = 1484
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIVTENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|548372|sp|Q00960.1|NMDE2_RAT RecName: Full=Glutamate receptor ionotropic, NMDA 2B; Short=GluN2B;
AltName: Full=Glutamate [NMDA] receptor subunit
epsilon-2; AltName: Full=N-methyl D-aspartate receptor
subtype 2B; Short=NMDAR2B; Short=NR2B; Flags: Precursor
gi|205739|gb|AAA41714.1| NMDA receptor subtype 2B [Rattus norvegicus]
Length = 1482
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIISENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|1899202|gb|AAB49993.1| N-methyl-D-aspartate receptor 2B subunit precursor [Homo sapiens]
Length = 1484
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIVTENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|6980984|ref|NP_036706.1| glutamate receptor ionotropic, NMDA 2B precursor [Rattus
norvegicus]
gi|508292|gb|AAA50554.1| NMDAR2B glutamate receptor subunit [Rattus norvegicus]
Length = 1482
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIISENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|167003331|ref|NP_000825.2| glutamate receptor ionotropic, NMDA 2B precursor [Homo sapiens]
gi|297691272|ref|XP_002823014.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2 [Pongo
abelii]
gi|14548162|sp|Q13224.3|NMDE2_HUMAN RecName: Full=Glutamate receptor ionotropic, NMDA 2B; Short=GluN2B;
AltName: Full=Glutamate [NMDA] receptor subunit
epsilon-2; AltName: Full=N-methyl D-aspartate receptor
subtype 2B; Short=NMDAR2B; Short=NR2B; AltName:
Full=N-methyl-D-aspartate receptor subunit 3; Short=NR3;
Short=hNR3; Flags: Precursor
gi|109730561|gb|AAI13619.1| Glutamate receptor, ionotropic, N-methyl D-aspartate 2B [Homo
sapiens]
gi|109730563|gb|AAI13621.1| Glutamate receptor, ionotropic, N-methyl D-aspartate 2B [Homo
sapiens]
gi|119616717|gb|EAW96311.1| glutamate receptor, ionotropic, N-methyl D-aspartate 2B [Homo
sapiens]
Length = 1484
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIVTENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|55846754|gb|AAV67381.1| glutamate receptor ionotropic N-methyl-D-aspartate subunit 2A
[Macaca fascicularis]
Length = 971
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 104 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 161
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 162 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 214
>gi|426371792|ref|XP_004052824.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2 [Gorilla
gorilla gorilla]
Length = 1484
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIVTENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|149049163|gb|EDM01617.1| glutamate receptor, ionotropic, N-methyl D-aspartate 2B, isoform
CRA_a [Rattus norvegicus]
gi|149049164|gb|EDM01618.1| glutamate receptor, ionotropic, N-methyl D-aspartate 2B, isoform
CRA_a [Rattus norvegicus]
Length = 1482
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIISENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|395859592|ref|XP_003802118.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1-like isoform
1 [Otolemur garnettii]
gi|395859594|ref|XP_003802119.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1-like isoform
2 [Otolemur garnettii]
Length = 1464
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|326676517|ref|XP_001921158.2| PREDICTED: hypothetical protein LOC449864 [Danio rerio]
Length = 1814
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 61 HLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCS 120
HL++ LEE P++ + P DP TG C + V CR+ ++ + +S CC
Sbjct: 350 HLRVVTLEERPFVIVEPADPGTGSC-IRDSVPCRLP----LNNRSSMVVEGIQSMKHCCK 404
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCID+L + A+ +GFTY+L V +G+ G D
Sbjct: 405 GFCIDVLKRLAKIVGFTYDLYLVTNGRHGKNID 437
>gi|410901691|ref|XP_003964329.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2-like
[Takifugu rubripes]
Length = 1685
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 57/121 (47%), Gaps = 10/121 (8%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP E HL I LEEAP++ + DP++ C M V
Sbjct: 444 WENRSLSMKYHVWPRFELYGGAATREDDHLSIVTLEEAPFVIVEDVDPLSLTC-MRNTVP 502
Query: 93 CRVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
CR +I Y +CC GFCID+L K A+ + FTY+L V +GK G
Sbjct: 503 CR-------KQIKTLNQTKESGIYIKRCCKGFCIDILKKIAKTVKFTYDLYLVTNGKHGK 555
Query: 151 Q 151
+
Sbjct: 556 K 556
>gi|332232769|ref|XP_003265575.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-2-like [Nomascus leucogenys]
Length = 1484
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIVTENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|117168299|ref|NP_032197.3| glutamate receptor ionotropic, NMDA 2B precursor [Mus musculus]
gi|148678611|gb|EDL10558.1| glutamate receptor, ionotropic, NMDA2B (epsilon 2) [Mus musculus]
gi|225000316|gb|AAI72745.1| glutamate receptor, ionotropic, NMDA2B (epsilon 2) [synthetic
construct]
Length = 1482
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIISENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|348569372|ref|XP_003470472.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-2-like [Cavia porcellus]
Length = 1483
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIISENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|395506543|ref|XP_003757591.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 1
[Sarcophilus harrisii]
Length = 943
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPP---DPVTGKCNMNRGVICRVAG 97
+ I+WPG P+G LKI + + P++ + P + +N I +V
Sbjct: 398 RKIIWPGGETEKPEGYEMSTRLKIVTIHQEPFVYVKPALDGETCNEDLTINGEKIKKVTC 457
Query: 98 DADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
D A H + QCC GFCIDLL A+ + FTYE+ V DGK+GTQE +
Sbjct: 458 TGPNDTHPGANRH---TILQCCYGFCIDLLIDLAKTMNFTYEVHLVADGKFGTQERV 511
>gi|354484589|ref|XP_003504469.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2 [Cricetulus
griseus]
Length = 1483
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIISENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|395850518|ref|XP_003797831.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2 [Otolemur
garnettii]
Length = 1488
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIVTENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|348520902|ref|XP_003447966.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2-like
[Oreochromis niloticus]
Length = 1750
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 13/122 (10%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPE-KFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
WE+ L ++ VWP G E K HL I LEEAP++ + DP++G C M V
Sbjct: 473 WERGSLTMRYHVWP--RFELYSGAEERKDHLSIVTLEEAPFVIVEDVDPLSGTC-MRNTV 529
Query: 92 ICRVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
CR ++ ++ + Y +CC GFCID+L K A+ + FTY+L V +GK G
Sbjct: 530 PCR-------KQLKLSNQTGDSGIYIKRCCKGFCIDILKKIAKTVKFTYDLYLVTNGKHG 582
Query: 150 TQ 151
+
Sbjct: 583 KK 584
>gi|149461353|ref|XP_001513355.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1-like, partial
[Ornithorhynchus anatinus]
Length = 491
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 55/119 (46%), Gaps = 10/119 (8%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDAD 100
+ I+WPG P+G LKI + + P++ + P G C V GD
Sbjct: 91 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTQG-DGTCKEE----TTVNGDPI 145
Query: 101 MDKI-----DVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
I + + QCC GFC+DLL K A + FTYE+ V DGK+GTQE +
Sbjct: 146 KKVICTGPNETTYGSSRHTVPQCCYGFCVDLLIKLARTMNFTYEVHLVADGKFGTQERV 204
>gi|301765198|ref|XP_002918018.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2-like
[Ailuropoda melanoleuca]
Length = 1483
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIVTENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|390467285|ref|XP_002752166.2| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-2 [Callithrix jacchus]
Length = 1483
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
C+ +I E Y +CC GFCID+L K ++ + FTY+L V +GK G
Sbjct: 436 CQ-------KRIITENKTDEEPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKHGK 488
Query: 151 Q 151
+
Sbjct: 489 K 489
>gi|402885271|ref|XP_003906086.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2 [Papio
anubis]
Length = 1484
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
C+ +I E Y +CC GFCID+L K ++ + FTY+L V +GK G
Sbjct: 436 CQ-------KRIITENKTDEEPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKHGK 488
Query: 151 Q 151
+
Sbjct: 489 K 489
>gi|109095759|ref|XP_001088140.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2 [Macaca
mulatta]
gi|355564036|gb|EHH20536.1| N-methyl D-aspartate receptor subtype 2B [Macaca mulatta]
gi|355785924|gb|EHH66107.1| N-methyl D-aspartate receptor subtype 2B [Macaca fascicularis]
Length = 1484
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
C+ +I E Y +CC GFCID+L K ++ + FTY+L V +GK G
Sbjct: 436 CQ-------KRIITENKTDEEPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKHGK 488
Query: 151 Q 151
+
Sbjct: 489 K 489
>gi|403286651|ref|XP_003934592.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2 [Saimiri
boliviensis boliviensis]
Length = 1483
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
C+ +I E Y +CC GFCID+L K ++ + FTY+L V +GK G
Sbjct: 436 CQ-------KRIITENKTDEEPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKHGK 488
Query: 151 Q 151
+
Sbjct: 489 K 489
>gi|62087280|dbj|BAD92087.1| Glutamate [NMDA] receptor subunit epsilon 2 precursor variant [Homo
sapiens]
Length = 1136
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 31 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 87
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 88 CQKRIVTENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 138
Query: 149 GTQ 151
G +
Sbjct: 139 GKK 141
>gi|56790282|ref|NP_001008717.1| glutamate receptor ionotropic, NMDA 1 precursor [Canis lupus
familiaris]
gi|56378333|dbj|BAD74218.1| N-methyl-D-aspartate receptor 1 [Canis lupus familiaris]
Length = 922
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>gi|431908360|gb|ELK11957.1| Glutamate [NMDA] receptor subunit epsilon-2 [Pteropus alecto]
Length = 1355
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 250 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 306
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 307 CQKRIVTENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 357
Query: 149 GTQ 151
G +
Sbjct: 358 GKK 360
>gi|317419594|emb|CBN81631.1| Glutamate [NMDA] receptor subunit epsilon-3 [Dicentrarchus labrax]
Length = 1414
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 33 WEKEG------LDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
W+K G L ++ VWP Q V + HL + LEE P++ + DP TG C
Sbjct: 403 WDKVGTFARGILQVRYPVWPRYGSFLEQ-VSDDRHLTVATLEEHPFVMVENVDPGTGTCV 461
Query: 87 MNRGVICRVAGDADMDKIDVAMAHHNESFYQ-CCSGFCIDLLGKFAEELGFTYELVRVED 145
N V CR + I H+ES+ + CC GFCID+L K + + F+Y+L V +
Sbjct: 462 RNT-VPCRRQSNRTESIIG-----HSESYTKLCCKGFCIDILKKLSRTIKFSYDLYLVTN 515
Query: 146 GKWG 149
GK G
Sbjct: 516 GKHG 519
>gi|396578153|ref|NP_001257535.1| glutamate receptor ionotropic, NMDA 1 isoform 3b precursor [Rattus
norvegicus]
gi|396578155|ref|NP_001257536.1| glutamate receptor ionotropic, NMDA 1 isoform 3a precursor [Rattus
norvegicus]
gi|475564|gb|AAB50931.1| N-methyl-D-aspartate receptor NMDAR1-3b subunit [Rattus norvegicus]
gi|149039387|gb|EDL93607.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1, isoform
CRA_b [Rattus norvegicus]
Length = 943
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICR----VA 96
+ I+WPG P+G LKI + + P++ + P M+ G C+ V
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKP--------TMSDGT-CKEEFTVN 448
Query: 97 GDADMDKI-----DVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GD I D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQ
Sbjct: 449 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQ 508
Query: 152 EDL 154
E +
Sbjct: 509 ERV 511
>gi|11496971|ref|NP_000823.4| glutamate receptor ionotropic, NMDA 1 isoform NR1-1 precursor [Homo
sapiens]
gi|402895932|ref|XP_003911064.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 2
[Papio anubis]
gi|292283|gb|AAB59360.1| NMDA receptor subunit [Homo sapiens]
gi|307303|gb|AAA21180.1| NMDA receptor [Homo sapiens]
gi|380784789|gb|AFE64270.1| glutamate [NMDA] receptor subunit zeta-1 isoform NR1-1 precursor
[Macaca mulatta]
Length = 885
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>gi|396578159|ref|NP_001257539.1| glutamate receptor ionotropic, NMDA 1 isoform 4a precursor [Rattus
norvegicus]
gi|475566|gb|AAB50932.1| N-methyl-D-aspartate receptor NMDAR1-4a subunit [Rattus norvegicus]
gi|149039390|gb|EDL93610.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1, isoform
CRA_e [Rattus norvegicus]
Length = 885
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDAD 100
+ I+WPG P+G LKI + + P++ + P G C V GD
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTMS-DGTCKEE----FTVNGDPV 431
Query: 101 MDKI-----DVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
I D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE +
Sbjct: 432 KKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQERV 490
>gi|56378329|dbj|BAD74216.1| N-methyl-D-aspartate receptor 1 [Canis lupus familiaris]
Length = 885
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>gi|327287000|ref|XP_003228217.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1-like,
partial [Anolis carolinensis]
Length = 787
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 70/142 (49%), Gaps = 18/142 (12%)
Query: 17 HPTIFTSGICIGVWKSWEKEG------LDIKDIVWPG-NSHTPPQGVPEKFHLKITFLEE 69
HP + I + ++WEK G L K VWP NS + P+ HL I LEE
Sbjct: 360 HPRLVV--IVLNQTRNWEKAGKWENNTLSHKFSVWPRYNSFNDSE--PDNNHLSIVTLEE 415
Query: 70 APYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGK 129
AP++ + DP+T C N V CR I + ++ +CC GFCID+L K
Sbjct: 416 APFVIVEDMDPLTETCVKNT-VPCR------KFIIINNITKEGKNVKKCCKGFCIDILKK 468
Query: 130 FAEELGFTYELVRVEDGKWGTQ 151
++ + FTY+L V +GK G +
Sbjct: 469 LSKAIKFTYDLYLVTNGKHGKK 490
>gi|380812060|gb|AFE77905.1| glutamate [NMDA] receptor subunit zeta-1 isoform NR1-4 precursor
[Macaca mulatta]
Length = 922
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>gi|332261651|ref|XP_003279881.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
zeta-1 [Nomascus leucogenys]
Length = 821
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 276 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 335
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 336 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 388
Query: 154 L 154
+
Sbjct: 389 V 389
>gi|297374809|ref|NP_001172019.1| glutamate receptor ionotropic, NMDA 1 isoform NR1-4 precursor [Homo
sapiens]
gi|402895934|ref|XP_003911065.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 3
[Papio anubis]
Length = 943
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 458 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 510
Query: 154 L 154
+
Sbjct: 511 V 511
>gi|2343289|gb|AAB67724.1| NMDAR1 subunit isoform 4b [Homo sapiens]
Length = 943
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 458 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 510
Query: 154 L 154
+
Sbjct: 511 V 511
>gi|300798693|ref|NP_001179850.1| glutamate [NMDA] receptor subunit epsilon-2 precursor [Bos taurus]
gi|296487284|tpg|DAA29397.1| TPA: N-methyl-D-aspartate receptor subunit 2B-like [Bos taurus]
Length = 1497
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIISENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|426226963|ref|XP_004007602.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-2 [Ovis aries]
Length = 1433
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIISENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|475562|gb|AAB50930.1| N-methyl-D-aspartate receptor NMDAR1-3a subunit [Rattus norvegicus]
gi|149039391|gb|EDL93611.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1, isoform
CRA_f [Rattus norvegicus]
Length = 922
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICR----VA 96
+ I+WPG P+G LKI + + P++ + P M+ G C+ V
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKP--------TMSDGT-CKEEFTVN 427
Query: 97 GDADMDKI-----DVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GD I D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQ
Sbjct: 428 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQ 487
Query: 152 EDL 154
E +
Sbjct: 488 ERV 490
>gi|354503348|ref|XP_003513743.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1-like isoform 2
[Cricetulus griseus]
Length = 885
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>gi|396578151|ref|NP_001257534.1| glutamate receptor ionotropic, NMDA 1 isoform 2a precursor [Rattus
norvegicus]
gi|475556|gb|AAB50927.1| N-methyl-D-aspartate receptor NMDAR1-2a subunit [Rattus norvegicus]
gi|149039393|gb|EDL93613.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1, isoform
CRA_h [Rattus norvegicus]
Length = 901
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDAD 100
+ I+WPG P+G LKI + + P++ + P G C V GD
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTMS-DGTCKEE----FTVNGDPV 431
Query: 101 MDKI-----DVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
I D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE +
Sbjct: 432 KKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQERV 490
>gi|68052845|sp|Q5R1P0.2|NMDZ1_CANFA RecName: Full=Glutamate receptor ionotropic, NMDA 1; Short=GluN1;
AltName: Full=Glutamate [NMDA] receptor subunit zeta-1;
AltName: Full=N-methyl-D-aspartate receptor 1; AltName:
Full=N-methyl-D-aspartate receptor subunit NR1;
Short=NMD-R1; Flags: Precursor
Length = 943
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 458 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 510
Query: 154 L 154
+
Sbjct: 511 V 511
>gi|410979583|ref|XP_003996161.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1-like, partial
[Felis catus]
Length = 599
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 54 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 113
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 114 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 166
Query: 154 L 154
+
Sbjct: 167 V 167
>gi|348574736|ref|XP_003473146.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 2
[Cavia porcellus]
Length = 885
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>gi|2343287|gb|AAB67723.1| NMDAR1 subunit isoform 3b [Homo sapiens]
Length = 906
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 458 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 510
Query: 154 L 154
+
Sbjct: 511 V 511
>gi|11038635|ref|NP_067544.1| glutamate receptor ionotropic, NMDA 1 isoform NR1-2 precursor [Homo
sapiens]
gi|402895936|ref|XP_003911066.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 4
[Papio anubis]
gi|387542620|gb|AFJ71937.1| glutamate [NMDA] receptor subunit zeta-1 isoform NR1-2 precursor
[Macaca mulatta]
Length = 901
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>gi|56378331|dbj|BAD74217.1| N-methyl-D-aspartate receptor 1 [Canis lupus familiaris]
Length = 906
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 458 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 510
Query: 154 L 154
+
Sbjct: 511 V 511
>gi|395515131|ref|XP_003761760.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1-like,
partial [Sarcophilus harrisii]
Length = 1689
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L + VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 596 WENQTLSLTHAVWP-RYKSFADCEPDDNHLSIVTLEEAPFVIVEDIDPLTESCVRN-TVP 653
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 654 CR-----KFVKINNS-TNEGTNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 706
>gi|297374811|ref|NP_001172020.1| glutamate receptor ionotropic, NMDA 1 isoform 5 precursor [Homo
sapiens]
gi|402895938|ref|XP_003911067.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 5
[Papio anubis]
Length = 906
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 458 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 510
Query: 154 L 154
+
Sbjct: 511 V 511
>gi|228224|prf||1718345A NMDA receptor 1
Length = 938
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICR----VA 96
+ I+WPG P+G LKI + + P++ + P M+ G C+ V
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKP--------TMSDGT-CKEEFTVN 427
Query: 97 GDADMDKI-----DVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GD I D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQ
Sbjct: 428 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQ 487
Query: 152 EDL 154
E +
Sbjct: 488 ERV 490
>gi|396578157|ref|NP_001257537.1| glutamate receptor ionotropic, NMDA 1 isoform 4b precursor [Rattus
norvegicus]
gi|475568|gb|AAB50933.1| N-methyl-D-aspartate receptor NMDAR1-4b subunit [Rattus norvegicus]
gi|149039386|gb|EDL93606.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1, isoform
CRA_a [Rattus norvegicus]
Length = 906
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTMSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 458 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 510
Query: 154 L 154
+
Sbjct: 511 V 511
>gi|472846|gb|AAA62111.1| N-methyl-D-aspartate receptor subunit, partial [Homo sapiens]
Length = 591
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 46 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 105
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 106 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 158
Query: 154 L 154
+
Sbjct: 159 V 159
>gi|11038637|ref|NP_015566.1| glutamate receptor ionotropic, NMDA 1 isoform NR1-3 precursor [Homo
sapiens]
gi|402895930|ref|XP_003911063.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 1
[Papio anubis]
gi|548377|sp|Q05586.1|NMDZ1_HUMAN RecName: Full=Glutamate receptor ionotropic, NMDA 1; Short=GluN1;
AltName: Full=Glutamate [NMDA] receptor subunit zeta-1;
AltName: Full=N-methyl-D-aspartate receptor subunit NR1;
Short=NMD-R1; Flags: Precursor
gi|219920|dbj|BAA02732.1| key subunit of N-methyl-D-aspartate receptor [Homo sapiens]
gi|162318226|gb|AAI56962.1| Glutamate receptor, ionotropic, N-methyl D-aspartate 1 [synthetic
construct]
gi|162319232|gb|AAI56098.1| Glutamate receptor, ionotropic, N-methyl D-aspartate 1 [synthetic
construct]
gi|256997174|dbj|BAI22780.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1 [Pan
troglodytes]
gi|380784791|gb|AFE64271.1| glutamate [NMDA] receptor subunit zeta-1 isoform NR1-3 precursor
[Macaca mulatta]
Length = 938
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>gi|119608760|gb|EAW88354.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1, isoform
CRA_d [Homo sapiens]
Length = 892
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 347 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 406
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 407 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 459
Query: 154 L 154
+
Sbjct: 460 V 460
>gi|119608766|gb|EAW88360.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1, isoform
CRA_j [Homo sapiens]
Length = 876
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 368 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 427
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 428 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 480
Query: 154 L 154
+
Sbjct: 481 V 481
>gi|119608762|gb|EAW88356.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1, isoform
CRA_f [Homo sapiens]
Length = 855
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 347 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 406
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 407 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 459
Query: 154 L 154
+
Sbjct: 460 V 460
>gi|354503350|ref|XP_003513744.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1-like isoform 3
[Cricetulus griseus]
Length = 906
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 458 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 510
Query: 154 L 154
+
Sbjct: 511 V 511
>gi|348574738|ref|XP_003473147.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 3
[Cavia porcellus]
Length = 943
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 458 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 510
Query: 154 L 154
+
Sbjct: 511 V 511
>gi|281349890|gb|EFB25474.1| hypothetical protein PANDA_006399 [Ailuropoda melanoleuca]
Length = 1346
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 242 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 298
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 299 CQKRIVTENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 349
Query: 149 GTQ 151
G +
Sbjct: 350 GKK 352
>gi|380812058|gb|AFE77904.1| glutamate [NMDA] receptor subunit zeta-1 isoform NR1-3 precursor
[Macaca mulatta]
Length = 959
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 458 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 510
Query: 154 L 154
+
Sbjct: 511 V 511
>gi|119608757|gb|EAW88351.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1, isoform
CRA_b [Homo sapiens]
Length = 871
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 347 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 406
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 407 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 459
Query: 154 L 154
+
Sbjct: 460 V 460
>gi|8393484|ref|NP_058706.1| glutamate receptor ionotropic, NMDA 1 isoform 1a precursor [Rattus
norvegicus]
gi|548379|sp|P35439.1|NMDZ1_RAT RecName: Full=Glutamate receptor ionotropic, NMDA 1; Short=GluN1;
AltName: Full=Glutamate [NMDA] receptor subunit zeta-1;
AltName: Full=N-methyl-D-aspartate receptor subunit NR1;
Short=NMD-R1; Flags: Precursor
gi|57848|emb|CAA44914.1| N-methyl-D-Aspartate receptor [Rattus norvegicus]
gi|256033|gb|AAB23358.1| N-methyl-D-aspartate receptor subunit, NMDA-R1A {alternatively
spliced} [rats, Peptide, 938 aa]
gi|475554|gb|AAB50926.1| N-methyl-D-aspartate receptor NMDAR1-1a subunit [Rattus norvegicus]
gi|149039392|gb|EDL93612.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1, isoform
CRA_g [Rattus norvegicus]
Length = 938
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICR----VA 96
+ I+WPG P+G LKI + + P++ + P M+ G C+ V
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKP--------TMSDGT-CKEEFTVN 427
Query: 97 GDADMDKI-----DVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GD I D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQ
Sbjct: 428 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQ 487
Query: 152 EDL 154
E +
Sbjct: 488 ERV 490
>gi|348574734|ref|XP_003473145.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 1
[Cavia porcellus]
Length = 906
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 458 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 510
Query: 154 L 154
+
Sbjct: 511 V 511
>gi|307684390|dbj|BAJ20235.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1 [synthetic
construct]
Length = 909
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>gi|47209023|emb|CAF94353.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1391
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 13/122 (10%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKF-HLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
WE+ L ++ VWP G E+ HL I LEEAP++ + DP++G C M V
Sbjct: 237 WERGSLTMRYHVWP--RFELYSGAEERDDHLSIVTLEEAPFVIVEDVDPLSGTC-MRNTV 293
Query: 92 ICRVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
CR ++ ++ + Y +CC GFCID+L K A+ + FTY+L V +GK G
Sbjct: 294 PCR-------KQLKLSNHTGDSGIYIKRCCKGFCIDILKKIAKSVKFTYDLYLVTNGKHG 346
Query: 150 TQ 151
+
Sbjct: 347 KK 348
>gi|354503346|ref|XP_003513742.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1-like isoform 1
[Cricetulus griseus]
Length = 938
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>gi|396578147|ref|NP_001257532.1| glutamate receptor ionotropic, NMDA 1 isoform 2b precursor [Rattus
norvegicus]
gi|475560|gb|AAB50929.1| N-methyl-D-aspartate receptor NMDAR1-2b subunit [Rattus norvegicus]
gi|149039389|gb|EDL93609.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1, isoform
CRA_d [Rattus norvegicus]
Length = 922
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDAD 100
+ I+WPG P+G LKI + + P++ + P G C V GD
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTMS-DGTCKEE----FTVNGDPV 452
Query: 101 MDKI-----DVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
I D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE +
Sbjct: 453 KKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQERV 511
>gi|119608764|gb|EAW88358.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1, isoform
CRA_h [Homo sapiens]
Length = 686
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 141 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 200
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 201 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 253
Query: 154 L 154
+
Sbjct: 254 V 254
>gi|396578144|ref|NP_001257531.1| glutamate receptor ionotropic, NMDA 1 isoform 1b precursor [Rattus
norvegicus]
gi|56765|emb|CAA46335.1| NMDA receptor subunit, type NMDAR1-LL [Rattus norvegicus]
gi|475558|gb|AAB50928.1| N-methyl-D-aspartate receptor NMDAR1-1b subunit [Rattus norvegicus]
gi|149039388|gb|EDL93608.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1, isoform
CRA_c [Rattus norvegicus]
Length = 959
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTMSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 458 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 510
Query: 154 L 154
+
Sbjct: 511 V 511
>gi|344251290|gb|EGW07394.1| Glutamate [NMDA] receptor subunit zeta-1 [Cricetulus griseus]
Length = 998
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 474 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 533
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 534 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 586
Query: 154 L 154
+
Sbjct: 587 V 587
>gi|334312091|ref|XP_003339710.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 2
[Monodelphis domestica]
Length = 942
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN----MNRGVICRVA 96
+ I+WPG P+G LKI + + P++ + P CN +N I +V
Sbjct: 374 RKIIWPGGETEKPEGYEMSTRLKIVTIHQEPFVYVKPAQD-GETCNEDLTINGEKIKKVT 432
Query: 97 GDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
D A H + QCC GFCIDLL A+ + FTYE+ V DGK+GTQE +
Sbjct: 433 CTGPNDTHPGANRH---TVLQCCYGFCIDLLIDLAKTMNFTYEVHLVADGKFGTQERV 487
>gi|47217036|emb|CAG01664.1| unnamed protein product [Tetraodon nigroviridis]
Length = 699
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 57/121 (47%), Gaps = 10/121 (8%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP E HL I LEEAP++ + DP++ C M V
Sbjct: 258 WENGSLSMKYHVWPRFELYGGAATREDDHLSIVTLEEAPFVIVEDVDPLSLTC-MRNTVP 316
Query: 93 CRVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
CR +I Y +CC GFCID+L K A+ + FTY+L V +GK G
Sbjct: 317 CR-------KQIKTLNQTKESGIYIKRCCKGFCIDILKKIAKSVKFTYDLYLVTNGKHGK 369
Query: 151 Q 151
+
Sbjct: 370 K 370
>gi|334312093|ref|XP_001375016.2| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 1
[Monodelphis domestica]
Length = 947
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN----MNRGVICRVA 96
+ I+WPG P+G LKI + + P++ + P CN +N I +V
Sbjct: 395 RKIIWPGGETEKPEGYEMSTRLKIVTIHQEPFVYVKPAQD-GETCNEDLTINGEKIKKVT 453
Query: 97 GDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
D A H + QCC GFCIDLL A+ + FTYE+ V DGK+GTQE +
Sbjct: 454 CTGPNDTHPGANRH---TVLQCCYGFCIDLLIDLAKTMNFTYEVHLVADGKFGTQERV 508
>gi|119608756|gb|EAW88350.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1, isoform
CRA_a [Homo sapiens]
Length = 913
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 368 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 427
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 428 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 480
Query: 154 L 154
+
Sbjct: 481 V 481
>gi|62087416|dbj|BAD92155.1| NMDA receptor 1 isoform NR1-2 precursor variant [Homo sapiens]
Length = 934
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 402 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 461
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 462 -------TGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 514
Query: 154 L 154
+
Sbjct: 515 V 515
>gi|338720402|ref|XP_001917547.2| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
zeta-1 [Equus caballus]
Length = 952
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 405 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 464
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 465 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 517
Query: 154 L 154
+
Sbjct: 518 V 518
>gi|119608763|gb|EAW88357.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1, isoform
CRA_g [Homo sapiens]
Length = 649
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 141 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 200
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 201 TGPNDT-------SPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 253
Query: 154 L 154
+
Sbjct: 254 V 254
>gi|197313638|ref|NP_001127880.1| glutamate receptor ionotropic, NMDA 2A isoform 2 precursor [Homo
sapiens]
gi|109658650|gb|AAI17132.1| GRIN2A protein [Homo sapiens]
gi|219519943|gb|AAI43274.1| Glutamate receptor, ionotropic, N-methyl D-aspartate 2A [Homo
sapiens]
gi|313883900|gb|ADR83436.1| glutamate receptor, ionotropic, N-methyl D-aspartate 2A (GRIN2A),
transcript variant 3 [synthetic construct]
Length = 1281
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENHTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNT-VP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|109109727|ref|XP_001117773.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 [Macaca
mulatta]
Length = 867
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 401 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 460
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 461 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 513
Query: 154 L 154
+
Sbjct: 514 V 514
>gi|292285|gb|AAA36198.1| NMDA receptor subunit, partial [Homo sapiens]
Length = 602
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 78 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 137
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 138 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 190
Query: 154 L 154
+
Sbjct: 191 V 191
>gi|410931032|ref|XP_003978900.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2-like
[Takifugu rubripes]
Length = 1351
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 13/122 (10%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKF-HLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
WE+ L ++ VWP G E+ HL I LEEAP++ + DP++G C M V
Sbjct: 76 WERGSLTMRFHVWP--RFELYSGAEERDDHLSIVTLEEAPFVIVEDVDPLSGTC-MRNTV 132
Query: 92 ICRVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
CR ++ ++ + Y +CC GFCID+L K A+ + FTY+L V +GK G
Sbjct: 133 PCR-------KQLKLSNHTGDSGIYIKRCCKGFCIDILKKIAKSVKFTYDLYLVTNGKHG 185
Query: 150 TQ 151
+
Sbjct: 186 KK 187
>gi|119608761|gb|EAW88355.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1, isoform
CRA_e [Homo sapiens]
Length = 892
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 368 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 427
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 428 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 480
Query: 154 L 154
+
Sbjct: 481 V 481
>gi|403301560|ref|XP_003941455.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 [Saimiri
boliviensis boliviensis]
Length = 853
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 14/119 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 458 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQE 509
>gi|348526309|ref|XP_003450662.1| PREDICTED: hypothetical protein LOC100699220 [Oreochromis
niloticus]
Length = 1851
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 33 WEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRG 90
WE L ++ W G PP + HL++ LEE P++ + DP +G C +
Sbjct: 406 WENGVLRLRYPAWSRYGPFLKPPD---DAQHLRVVTLEERPFVIVELADPASGTC-IRDS 461
Query: 91 VICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
V CR +A VA QCC GFCID+L + A+ +GFTY+L V +GK G
Sbjct: 462 VPCRRPLNASAIHEGVA------PMKQCCKGFCIDILKRLAKIVGFTYDLYLVTNGKHGK 515
Query: 151 QED 153
+ D
Sbjct: 516 KID 518
>gi|194380692|dbj|BAG58499.1| unnamed protein product [Homo sapiens]
Length = 1124
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 221 WENHTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 278
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 279 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 331
>gi|119608765|gb|EAW88359.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1, isoform
CRA_i [Homo sapiens]
Length = 665
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDAD 100
+ I+WPG P+G LKI + + P++ + P G C V GD
Sbjct: 141 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLS-DGTCKEE----FTVNGDPV 195
Query: 101 MDKI-----DVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
I D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE +
Sbjct: 196 KKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQERV 254
>gi|119608758|gb|EAW88352.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1, isoform
CRA_c [Homo sapiens]
gi|119608759|gb|EAW88353.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1, isoform
CRA_c [Homo sapiens]
Length = 702
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 141 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 200
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 201 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 253
Query: 154 L 154
+
Sbjct: 254 V 254
>gi|444521184|gb|ELV13125.1| Glutamate [NMDA] receptor subunit zeta-1 [Tupaia chinensis]
Length = 857
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P G LKI + + P++ + P + T + + VIC
Sbjct: 326 RKIIWPGGETEKPPGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 385
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D A H + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 386 TGPNDTSPGS-----ARH--TVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 438
Query: 154 L 154
+
Sbjct: 439 V 439
>gi|508971|gb|AAA19659.1| NMDAR1 glutamate receptor subunit [Rattus norvegicus]
Length = 938
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKC----NMNRGVICRVA 96
+ I+WPG P+G LKI + + P++ + P G C +N + +V
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTMS-DGTCKEEFTVNGDPVKKVI 435
Query: 97 GDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
D + H + QCC GFCIDLL K A + FTYE+ V DGK+GTQE +
Sbjct: 436 CTGPNDTFPGSPRH---TVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQERV 490
>gi|397473702|ref|XP_003808342.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1 isoform 1
[Pan paniscus]
gi|397473704|ref|XP_003808343.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1 isoform 2
[Pan paniscus]
Length = 1464
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENHTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|62087578|dbj|BAD92236.1| NMDA receptor 1 isoform NR1-2 precursor variant [Homo sapiens]
Length = 663
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 131 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 190
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 191 -------TGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 243
Query: 154 L 154
+
Sbjct: 244 V 244
>gi|332240274|ref|XP_003269314.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1 isoform 1
[Nomascus leucogenys]
gi|332240276|ref|XP_003269315.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1 isoform 2
[Nomascus leucogenys]
Length = 1464
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENHTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|432889194|ref|XP_004075159.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1-like [Oryzias
latipes]
Length = 860
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 25 ICIGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGK 84
+ +G++ + + + I+WPG PQG LKI + + P++ + P + G
Sbjct: 275 VQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVTIHQEPFVYVKPT-MLDGT 333
Query: 85 C----NMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYEL 140
C +N +I +V + I QCC GFCIDLL K A + FTYE+
Sbjct: 334 CKEELTLNGVLIKKVICTGPNETIP-----GRPIIPQCCYGFCIDLLIKLAMTMNFTYEV 388
Query: 141 VRVEDGKWGTQEDL 154
V DGK+GTQE +
Sbjct: 389 HLVADGKFGTQERV 402
>gi|426381187|ref|XP_004057235.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1 isoform 1
[Gorilla gorilla gorilla]
gi|426381189|ref|XP_004057236.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1 isoform 2
[Gorilla gorilla gorilla]
Length = 1464
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENHTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|256997176|dbj|BAI22781.1| glutamate receptor, ionotropic, N-methyl D-aspartate 2A [Pan
troglodytes]
Length = 1464
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENHTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|126334664|ref|XP_001366920.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1-like
[Monodelphis domestica]
Length = 1471
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L + VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 377 WENQTLSLTHSVWP-RYKSFADCEPDDNHLSIVTLEEAPFVIVEDIDPLTESCVRN-TVP 434
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 435 CR-----KFVKINNS-TNEGTNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 487
>gi|77736529|ref|NP_001029361.1| glutamate receptor ionotropic, NMDA 2A precursor [Pan troglodytes]
gi|61214437|sp|Q5IS45.1|NMDE1_PANTR RecName: Full=Glutamate receptor ionotropic, NMDA 2A; Short=GluN2A;
AltName: Full=Glutamate [NMDA] receptor subunit
epsilon-1; AltName: Full=N-methyl D-aspartate receptor
subtype 2A; Short=NMDAR2A; Short=NR2A; Flags: Precursor
gi|56122340|gb|AAV74321.1| glutamate receptor ionotropic N-methyl-D-aspartate subunit 2A [Pan
troglodytes]
Length = 1464
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENHTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|395825990|ref|XP_003786203.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-3 [Otolemur
garnettii]
Length = 1235
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WDHGVLYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + D CC GFCID+L K A+ + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSSDAPPYTK-----LCCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKR 486
>gi|348530536|ref|XP_003452767.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-4-like
[Oreochromis niloticus]
Length = 552
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 61 HLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCS 120
HL++ LEE P++ + P DP TG C + V CR+ ++ + V H CC
Sbjct: 322 HLRVVTLEERPFVIVEPADPGTGSC-IRDSVPCRMPVNSSLVVDGVRPMKH------CCK 374
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCID+L + A+ +GFTY+L V +G+ G D
Sbjct: 375 GFCIDVLKRLAKIVGFTYDLYLVTNGRHGKNID 407
>gi|4504125|ref|NP_000824.1| glutamate receptor ionotropic, NMDA 2A isoform 1 precursor [Homo
sapiens]
gi|197313636|ref|NP_001127879.1| glutamate receptor ionotropic, NMDA 2A isoform 1 precursor [Homo
sapiens]
gi|14285603|sp|Q12879.1|NMDE1_HUMAN RecName: Full=Glutamate receptor ionotropic, NMDA 2A; Short=GluN2A;
AltName: Full=Glutamate [NMDA] receptor subunit
epsilon-1; AltName: Full=N-methyl D-aspartate receptor
subtype 2A; Short=NMDAR2A; Short=NR2A; Short=hNR2A;
Flags: Precursor
gi|558749|gb|AAB60343.1| N-methyl-D-aspartate receptor modulatory subunit 2A [Homo sapiens]
gi|1899200|gb|AAB49992.1| N-methyl-D-aspartate receptor 2A subunit precursor [Homo sapiens]
gi|25987370|gb|AAN75825.1| NMDA receptor subtype 2A gene [Homo sapiens]
gi|119605593|gb|EAW85187.1| glutamate receptor, ionotropic, N-methyl D-aspartate 2A [Homo
sapiens]
gi|1090530|prf||2019260A D-MeAsp receptor:SUBUNIT=modulatory
Length = 1464
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENHTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|301611013|ref|XP_002935032.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-4-like
[Xenopus (Silurana) tropicalis]
Length = 1366
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VW Q V + HL + LEE P++ + DP TG C + V
Sbjct: 381 WEHGDLRMKYPVWSRYGKFL-QPVDDDQHLTVATLEERPFVIVEGVDPATGTC-IRDSVP 438
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
CR +++ D + QCC GFCID+L + ++ +GFTY+L V +GK G +
Sbjct: 439 CR----KQLNRTDNHLTDPIIFVKQCCKGFCIDILKRLSKTIGFTYDLYLVTNGKHGKKI 494
Query: 153 D 153
D
Sbjct: 495 D 495
>gi|168277762|dbj|BAG10859.1| glutamate [NMDA] receptor subunit epsilon 1 precursor [synthetic
construct]
Length = 1464
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENHTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>gi|327265051|ref|XP_003217322.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-3-like [Anolis
carolinensis]
Length = 1427
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 60/123 (48%), Gaps = 18/123 (14%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WEK + +K VWP + Q + + HL + LEE P++ + DP TG C N V
Sbjct: 420 WEKGIIQMKYPVWP-RYGSFLQPMADNRHLTVATLEERPFVIVENTDPSTGVCVRNT-VP 477
Query: 93 CRV------AGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDG 146
CR +GD MD CC GFCID+L K A+ + F+Y+L V +G
Sbjct: 478 CRKQPNHTESGDGPMDPYTKL----------CCKGFCIDILKKLAKTVKFSYDLYLVTNG 527
Query: 147 KWG 149
K G
Sbjct: 528 KHG 530
>gi|74196488|dbj|BAE34379.1| unnamed protein product [Mus musculus]
Length = 741
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICR----VA 96
+ I+WPG P+G LKI + + P++ + P M+ G C+ V
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKP--------TMSDGT-CKEEFTVN 427
Query: 97 GDADMDKI-----DVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GD I D + + QCC GFC+DLL K A + FTYE+ V DGK+GTQ
Sbjct: 428 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCVDLLIKLARTMNFTYEVHLVADGKFGTQ 487
Query: 152 EDL 154
E +
Sbjct: 488 ERV 490
>gi|294997259|ref|NP_001171128.1| glutamate receptor ionotropic, NMDA 1 isoform 3 precursor [Mus
musculus]
gi|24657649|gb|AAH39157.1| Grin1 protein [Mus musculus]
Length = 885
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDAD 100
+ I+WPG P+G LKI + + P++ + P G C V GD
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTMS-DGTCKEE----FTVNGDPV 431
Query: 101 MDKI-----DVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
I D + + QCC GFC+DLL K A + FTYE+ V DGK+GTQE +
Sbjct: 432 KKVICTGPNDTSPGSPRHTVPQCCYGFCVDLLIKLARTMNFTYEVHLVADGKFGTQERV 490
>gi|62088970|dbj|BAD92932.1| N-methyl-D-aspartate receptor subunit 2A precursor variant [Homo
sapiens]
Length = 1491
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 405 WENHTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 462
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 463 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 515
>gi|301781558|ref|XP_002926176.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1-like isoform 3
[Ailuropoda melanoleuca]
Length = 885
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFC+DLL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPND-------TSPGSPRHTVPQCCYGFCVDLLIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>gi|301781556|ref|XP_002926175.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1-like isoform 2
[Ailuropoda melanoleuca]
Length = 922
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFC+DLL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPND-------TSPGSPRHTVPQCCYGFCVDLLIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>gi|359070755|ref|XP_002691748.2| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 [Bos taurus]
Length = 923
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFC+DLL K A + FTYE+ V DGK+GTQE
Sbjct: 458 TGPND-------TSPGSPRHTVPQCCYGFCVDLLIKLARTMNFTYEVHLVADGKFGTQER 510
Query: 154 L 154
+
Sbjct: 511 V 511
>gi|296481993|tpg|DAA24108.1| TPA: N-methyl-D-aspartate receptor 1-like [Bos taurus]
Length = 865
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFC+DLL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPND-------TSPGSPRHTVPQCCYGFCVDLLIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>gi|294997257|ref|NP_001171127.1| glutamate receptor ionotropic, NMDA 1 isoform 2 precursor [Mus
musculus]
Length = 906
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTMSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFC+DLL K A + FTYE+ V DGK+GTQE
Sbjct: 458 TGPND-------TSPGSPRHTVPQCCYGFCVDLLIKLARTMNFTYEVHLVADGKFGTQER 510
Query: 154 L 154
+
Sbjct: 511 V 511
>gi|301781560|ref|XP_002926177.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1-like isoform 4
[Ailuropoda melanoleuca]
Length = 938
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFC+DLL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPND-------TSPGSPRHTVPQCCYGFCVDLLIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>gi|301781554|ref|XP_002926174.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1-like isoform 1
[Ailuropoda melanoleuca]
Length = 906
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFC+DLL K A + FTYE+ V DGK+GTQE
Sbjct: 458 TGPND-------TSPGSPRHTVPQCCYGFCVDLLIKLARTMNFTYEVHLVADGKFGTQER 510
Query: 154 L 154
+
Sbjct: 511 V 511
>gi|6680095|ref|NP_032195.1| glutamate receptor ionotropic, NMDA 1 isoform 1 precursor [Mus
musculus]
gi|548378|sp|P35438.1|NMDZ1_MOUSE RecName: Full=Glutamate receptor ionotropic, NMDA 1; Short=GluN1;
AltName: Full=Glutamate [NMDA] receptor subunit zeta-1;
AltName: Full=N-methyl-D-aspartate receptor subunit NR1;
Short=NMD-R1; Flags: Precursor
gi|220413|dbj|BAA00920.1| glutamate receptor channel subunit zeta-1 [Mus musculus]
Length = 938
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTMSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFC+DLL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPND-------TSPGSPRHTVPQCCYGFCVDLLIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>gi|301781562|ref|XP_002926178.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1-like isoform 5
[Ailuropoda melanoleuca]
Length = 901
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFC+DLL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPND-------TSPGSPRHTVPQCCYGFCVDLLIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>gi|281345345|gb|EFB20929.1| hypothetical protein PANDA_015809 [Ailuropoda melanoleuca]
Length = 962
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFC+DLL K A + FTYE+ V DGK+GTQE
Sbjct: 458 TGPND-------TSPGSPRHTVPQCCYGFCVDLLIKLARTMNFTYEVHLVADGKFGTQER 510
Query: 154 L 154
+
Sbjct: 511 V 511
>gi|410917830|ref|XP_003972389.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1-like
[Takifugu rubripes]
Length = 1504
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L + VWP + + E HL I LEE P++ + D +TG CN N V
Sbjct: 365 WENGTLSLMFPVWPRYNSYGDEDADEN-HLSIVTLEEKPFVIVDNVDILTGTCNRN-SVP 422
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + QCC GFCID+L K A + FTY+L V +GK G +
Sbjct: 423 CR-------RHVKDNSTSGGAYIKQCCKGFCIDILKKIARNVKFTYDLYLVTNGKHGKK 474
>gi|432093397|gb|ELK25483.1| Glutamate [NMDA] receptor subunit epsilon-4 [Myotis davidii]
Length = 1480
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 265 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 322
Query: 92 ICRVAGD-------ADMDKIDVAMAHHNES---FYQCCSGFCIDLLGKFAEELGFTYELV 141
CR + + K V + ++ +CC GFCID+L + A+ +GF+Y+L
Sbjct: 323 PCRSQLNRTHRRAVPSVPKPAVPRSPPPDAPRPEKRCCKGFCIDILKRLAQTIGFSYDLY 382
Query: 142 RVEDGKWGTQED 153
V +GK G + D
Sbjct: 383 LVTNGKHGKKID 394
>gi|119589982|gb|EAW69576.1| glutamate receptor, ionotropic, N-methyl-D-aspartate 3B [Homo
sapiens]
Length = 1043
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKDIVWPGNSHT---PPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW LD++ PG + PPQG + L++ L E P++ PD G+C
Sbjct: 388 SWRDGQLDLE----PGGASARPPPPQGAQVRPKLRVVTLLEHPFVFARDPDE-DGQCPA- 441
Query: 89 RGVICRVAGDAD---MDKIDVAMAHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C G D +D + A+A+ + + +CC G+CIDLL + AE+ F +EL V
Sbjct: 442 -GQLCLDPGTNDSATLDALFAALANGSAPRALRKCCYGYCIDLLERLAEDTPFDFELYLV 500
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 501 GDGKYGALRD 510
>gi|47218959|emb|CAF98157.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1563
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L + VWP + + E HL I LEE P++ + D +TG CN N V
Sbjct: 447 WENGTLSLMFPVWPRYNSYGDEDADEN-HLSIVTLEEKPFVIVDNVDILTGTCNRN-SVP 504
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + QCC GFCID+L K A + FTY+L V +GK G +
Sbjct: 505 CR-------RHVKDNSTSGGAYIKQCCKGFCIDILKKIARNVKFTYDLYLVTNGKHGKK 556
>gi|325974456|ref|NP_001070182.2| glutamate receptor, ionotropic, N-methyl D-aspartate 1a precursor
[Danio rerio]
Length = 901
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 5 FQKSMIIEIELFHPTIFTSGICIGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKI 64
+QKS +I++ GI G K+ + I+WPG P+G LKI
Sbjct: 373 YQKSRLIQV----------GIYNGTQVVMNKQ----RKIIWPGGETERPRGFQMSTRLKI 418
Query: 65 TFLEEAPYIQMSPPDPVTGKCN--------MNRGVICRVAGDADMDKIDVAMAHHNESFY 116
+ + P++ + P + G C + + VIC + + V
Sbjct: 419 VTIHQEPFVYVKPTT-LEGTCKEEYTPNGVLIKKVICTGPNETIPGRPIVP--------- 468
Query: 117 QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
QCC GFCIDLL K A + FTYE+ V DGK+GTQE +
Sbjct: 469 QCCYGFCIDLLIKLALTMNFTYEVHLVADGKFGTQERV 506
>gi|241757029|ref|XP_002406475.1| glutamate receptor, putative [Ixodes scapularis]
gi|215506169|gb|EEC15663.1| glutamate receptor, putative [Ixodes scapularis]
Length = 598
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 13/121 (10%)
Query: 30 WKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
W + L++ +VWPGN P G HLK+ + E P++ + P P C +
Sbjct: 53 WSMSMELDLELDRVVWPGNRTETPLGYVIPKHLKVATIAERPFVWVRPV-PDESDC-LPS 110
Query: 90 GVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
+ C +D ++ CC G+C+DLL +++L FTY L +V+DG++G
Sbjct: 111 EIFCPWTNSSD-----------GIAYPFCCEGYCMDLLQSLSQKLNFTYTLYQVQDGQYG 159
Query: 150 T 150
T
Sbjct: 160 T 160
>gi|348537056|ref|XP_003456011.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1-like
[Oreochromis niloticus]
Length = 1661
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 25 ICIGVWKSWEKEG------LDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPP 78
I + V + WEK G L + VWP + + E HL I LEE P++ +
Sbjct: 505 IVLNVERKWEKMGRWENGTLSLMFPVWPRYNSYGDEDADEN-HLSIVTLEEKPFVIVDNV 563
Query: 79 DPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTY 138
D +TG C M V CR + QCC GFCID+L K A + FTY
Sbjct: 564 DILTGTC-MRNSVPCR-------KHVKNNSTSGGAYIKQCCKGFCIDILKKIARNVKFTY 615
Query: 139 ELVRVEDGKWGTQ 151
+L V +GK G +
Sbjct: 616 DLYLVTNGKHGKK 628
>gi|25073695|gb|AAN65280.1| NMDA receptor subunit NR2B [Apteronotus leptorhynchus]
Length = 1617
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP + HL I LEEAP++ + DP++G C M V
Sbjct: 428 WENGSLLMKYHVWPRFELHSGAERRQDDHLSIVTLEEAPFVIVEDVDPLSGTC-MRNTVP 486
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR K+ +CC GFCID+L K A+ + FTY+L V +GK G +
Sbjct: 487 CR-----KQLKMRNQTGDSGVYIKRCCKGFCIDILKKIAKSVKFTYDLYLVTNGKHGKK 540
>gi|4099613|gb|AAD00659.1| N-methyl-D-aspartate receptor subunit 2B [Homo sapiens]
Length = 1484
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTAP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIVTENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>gi|228723|prf||1809347A D-MeAsp receptor:SUBUNIT=epsilon1
Length = 1464
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ +L I LEEAP++ + DP+T C N V
Sbjct: 378 WENQTLRLRHAVWP-RYKSFSDCEPDDNNLSIVTLEEAPFVIVEDIDPLTETCVRNT-VP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKNGKK 488
>gi|209738742|emb|CAP70079.1| NMDA receptor subunit NR1 [Carassius carassius]
Length = 905
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 18/153 (11%)
Query: 5 FQKSMIIEIELFHPTIFTSGICIGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKI 64
+QKS ++++ GI G K+ K I+WPG P+G LKI
Sbjct: 373 YQKSRLLQV----------GIYNGTQVVMNKQ----KKIIWPGGETERPRGFQMSTRLKI 418
Query: 65 TFLEEAPYIQMSPPDPVTGKCNMN---RGVICRVAGDADMDKIDVAMAHHNESFYQCCSG 121
+ + P++ + P + G C GV+ + ++ + QCC G
Sbjct: 419 VTIHQEPFVYVKP-TMLDGTCKEEYTPNGVLIKKVICTGPNETIPGNTSGRPTVPQCCYG 477
Query: 122 FCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
FC+DLL K A + FTYE+ V DGK+GTQE +
Sbjct: 478 FCVDLLIKLAMTMNFTYEVHLVADGKFGTQERV 510
>gi|358421558|ref|XP_003585016.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 [Bos taurus]
Length = 896
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 511 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 570
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFC+DLL K A + FTYE+ V DGK+GTQE
Sbjct: 571 -------TGPNDTSPGSPRHTVPQCCYGFCVDLLIKLARTMNFTYEVHLVADGKFGTQER 623
Query: 154 L 154
+
Sbjct: 624 V 624
>gi|299007026|gb|ADJ00043.1| NMDAR1 [Zalophus californianus]
Length = 451
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 301 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 360
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK GTQE
Sbjct: 361 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKLGTQER 413
Query: 154 L 154
+
Sbjct: 414 V 414
>gi|327289610|ref|XP_003229517.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1-like, partial
[Anolis carolinensis]
Length = 773
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 14/120 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAP--YIQMSPPDPVTGKC----NMNRGVICR 94
+ I+WPG PQG LKI + + P Y++ + D GKC N G++ +
Sbjct: 267 RKIIWPGGETETPQGYEMSTKLKIVTIHQEPFVYVKQTQQD---GKCEARHNSTGGLVQQ 323
Query: 95 VAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
V + + S CC GFCIDLL K A+ + FTYE+ V DGK+GTQE +
Sbjct: 324 VLCTGPNETMP-----GRPSVMLCCYGFCIDLLIKLAKTMNFTYEVHLVADGKFGTQERV 378
>gi|209738740|emb|CAP70078.1| NMDA receptor subunit NR1 [Carassius carassius]
Length = 901
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 5 FQKSMIIEIELFHPTIFTSGICIGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKI 64
+QKS ++++ GI G K+ K I+WPG P+G LKI
Sbjct: 373 YQKSRLLQV----------GIYNGTQVVMNKQ----KKIIWPGGETERPRGFQMSTRLKI 418
Query: 65 TFLEEAPYIQMSPPDPVTGKCN--------MNRGVICRVAGDADMDKIDVAMAHHNESFY 116
+ + P++ + P + G C + + VIC + + V
Sbjct: 419 VTIHQEPFVYVKP-TMLDGTCKEEYTPNGVLIKKVICTGPNETIPGRPTVP--------- 468
Query: 117 QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
QCC GFC+DLL K A + FTYE+ V DGK+GTQE +
Sbjct: 469 QCCYGFCVDLLIKLAMTMNFTYEVHLVADGKFGTQERV 506
>gi|432876044|ref|XP_004072949.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1-like [Oryzias
latipes]
Length = 1075
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 54/120 (45%), Gaps = 18/120 (15%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN--------MNRGVI 92
+ I+WPG P G LKI + + P++ + P G C + + VI
Sbjct: 536 RKIIWPGGETEKPVGYQMSTKLKIVTIHQEPFVYVKPTKS-DGTCKEEYTVNGVLIKKVI 594
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
C + V QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 595 CTGPNGTTPGQPIVP---------QCCYGFCIDLLIKLAMSMNFTYEVHLVADGKFGTQE 645
>gi|432847621|ref|XP_004066088.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1-like
[Oryzias latipes]
Length = 1621
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L + VWP + + E HL I LEE P++ + D +TG C M V
Sbjct: 480 WENGTLSLMFPVWPRYNAYGDEDADEN-HLSIVTLEEKPFVIVDNVDILTGTC-MRNSVP 537
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + + QCC GFCID+L K A + FTY+L V +GK G +
Sbjct: 538 CR-------KHVKLNSTSGGAYIKQCCKGFCIDILKKIARNVKFTYDLYLVTNGKHGKK 589
>gi|301620501|ref|XP_002939618.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-3-like
[Xenopus (Silurana) tropicalis]
Length = 1249
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/121 (34%), Positives = 59/121 (48%), Gaps = 17/121 (14%)
Query: 33 WEKEGLDIKDIVWP----GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
WE + +K VWP GN Q V + HL + LEE P++ + DP TG C N
Sbjct: 431 WESGIIRMKYPVWPRYGAGN-----QLVTDSRHLTVATLEERPFVIVESTDPATGDCIRN 485
Query: 89 RGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
V CR + ++ ++ CC GFCID+L K A + F+Y+L V +GK
Sbjct: 486 T-VPCR-------KQSNLTLSSGEPYTKLCCKGFCIDILKKLARTVKFSYDLYLVTNGKH 537
Query: 149 G 149
G
Sbjct: 538 G 538
>gi|3493580|gb|AAC33440.1| N-methyl-D-aspartate receptor NR1 subunit precursor [Apteronotus
leptorhynchus]
Length = 966
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 5 FQKSMIIEIELFHPTIFTSGICIGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKI 64
+QKS ++++ GI G K+ + I+WPG P+G LKI
Sbjct: 373 YQKSRLVQV----------GIYNGTQVVLNKQ----RKIIWPGGETERPRGFQMSTRLKI 418
Query: 65 TFLEEAPYIQMSPPDPVTGKCN--------MNRGVICRVAGDADMDKIDVAMAHHNESFY 116
+ + P++ + P + G C + + VIC + + V
Sbjct: 419 VTIHQEPFVYVKP-TLMDGTCKEEHTPNGVLIKKVICTGPNETIPGRPTVP--------- 468
Query: 117 QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
QCC GFCIDLL K A + FTYE+ V DGK+GTQE +
Sbjct: 469 QCCYGFCIDLLIKLAMTMNFTYEVHLVADGKFGTQERV 506
>gi|292287|gb|AAB59361.1| NMDA receptor subunit, partial [Homo sapiens]
Length = 928
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 367 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 426
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQ+
Sbjct: 427 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQKR 479
Query: 154 L 154
+
Sbjct: 480 V 480
>gi|410911328|ref|XP_003969142.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-4-like
[Takifugu rubripes]
Length = 705
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 33 WEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRG 90
WE L ++ W G+ P + + HL++ LEE P++ + P DP T C +
Sbjct: 434 WENGHLRLRHHPWSRYGSFLKP---LDDSQHLRVVTLEERPFVIVEPADPGTSSC-IRDS 489
Query: 91 VICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
V CR+ +A + H CC GFCID+L + A+ +GFTY+L V +G+ G
Sbjct: 490 VPCRMPVNASLAVEGSGPMKH------CCKGFCIDVLKRLAKNVGFTYDLYLVTNGRHGK 543
Query: 151 QED 153
D
Sbjct: 544 NID 546
>gi|292619591|ref|XP_002664030.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-3-like [Danio
rerio]
Length = 1328
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 33 WEKEG------LDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGK 84
W+K G L ++ VWP G+ P V + HL + LEE P++ + DP TG
Sbjct: 376 WDKVGSYEGGILQMRYPVWPRYGSFLEP---VSDNRHLTVATLEERPFVIVESVDPATGT 432
Query: 85 CNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
C N V CR ++ + + H CC GFCID+L K + + F+Y+L V
Sbjct: 433 CVRNT-VPCR----RQSNRTESIIGHTEPYTKLCCKGFCIDILKKLSRTIKFSYDLYLVT 487
Query: 145 DGKWG 149
+GK G
Sbjct: 488 NGKHG 492
>gi|348531940|ref|XP_003453465.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-3-like
[Oreochromis niloticus]
Length = 1399
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 64/126 (50%), Gaps = 18/126 (14%)
Query: 33 WEKEG------LDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGK 84
W+K G L ++ +WP GN + V + HL + LEE P++ + DP TG
Sbjct: 387 WDKVGTYARGVLQVRYPIWPRYGNFL---EHVSDDRHLTVATLEEHPFVMVENVDPGTGT 443
Query: 85 CNMNRGVICRVAGDADMDKIDVAMAHHNESFYQ-CCSGFCIDLLGKFAEELGFTYELVRV 143
C N V CR + I H+ES+ + CC GFCID+L K + + F+Y+L V
Sbjct: 444 CVRNT-VPCRRQSNYTDSIIG-----HSESYTKLCCKGFCIDILKKLSRTIKFSYDLYLV 497
Query: 144 EDGKWG 149
+GK G
Sbjct: 498 TNGKHG 503
>gi|256997184|dbj|BAI22785.1| glutamate receptor, ionotropic, N-methyl D-aspartate 3B [Pan
troglodytes]
Length = 901
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKDIVWPGNSHT---PPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW LD++ PG + PPQG + L++ L E P++ PD G+C
Sbjct: 388 SWRDGQLDLE----PGGASARPPPPQGAQVRPKLRVVTLLEHPFVFARDPDE-DGQCPA- 441
Query: 89 RGVICRVAGDAD---MDKIDVAMAHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C G D +D + A+A+ + + +CC G+CIDLL + AE+ F +EL V
Sbjct: 442 -GQLCLDPGTNDSATLDALFAALANGSVPRALCKCCYGYCIDLLERLAEDTPFDFELYIV 500
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 501 GDGKYGALRD 510
>gi|426386499|ref|XP_004059721.1| PREDICTED: glutamate [NMDA] receptor subunit 3B [Gorilla gorilla
gorilla]
Length = 1092
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKDIVWPGNSHT---PPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW LD++ PG + PPQG + L++ L E P++ PD G+C
Sbjct: 446 SWRDGQLDLE----PGGASARPPPPQGAQVRPKLRVVTLLEHPFVFARDPDE-DGQCPA- 499
Query: 89 RGVICRVAGDAD---MDKIDVAMAHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C G D +D + A+A+ + + +CC G+CIDLL + AE+ F +EL V
Sbjct: 500 -GQLCLDPGTNDSATLDALFAALANGSVPRALRKCCYGYCIDLLERLAEDTPFDFELYIV 558
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 559 GDGKYGALRD 568
>gi|163914567|ref|NP_001106367.1| glutamate receptor, ionotropic, N-methyl D-aspartate 2A precursor
[Xenopus laevis]
gi|161328408|gb|ABX60543.1| N-methyl-D-aspartate receptor subunit NR2A [Xenopus laevis]
Length = 1451
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L++K VWP + + + HL I LEEAP++ + D +TG C N V
Sbjct: 370 WENKSLNMKYPVWPRITASLDSDHDDN-HLSIVTLEEAPFVIVENIDYLTGTCVRN-TVP 427
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + + S +CC GFCID+L K ++ + FTY+L V +GK G +
Sbjct: 428 CRKYFRLNNSTTE------GTSVKKCCKGFCIDILKKLSKTVKFTYDLYLVTNGKHGKK 480
>gi|213624028|gb|AAI70551.1| N-methyl-D-aspartate receptor subunit NR2A [Xenopus laevis]
Length = 1451
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L++K VWP + + + HL I LEEAP++ + D +TG C N V
Sbjct: 370 WENKSLNMKYPVWPRITASLDSDHDDN-HLSIVTLEEAPFVIVENIDYLTGTCVRN-TVP 427
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + + S +CC GFCID+L K ++ + FTY+L V +GK G +
Sbjct: 428 CRKYFRLNNSTTE------GTSVKKCCKGFCIDILKKLSKTVKFTYDLYLVTNGKHGKK 480
>gi|213626993|gb|AAI70552.1| N-methyl-D-aspartate receptor subunit NR2A [Xenopus laevis]
Length = 1451
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L++K VWP + + + HL I LEEAP++ + D +TG C N V
Sbjct: 370 WENKSLNMKYPVWPRITASLDSDHDDN-HLSIVTLEEAPFVIVENIDYLTGTCVRN-TVP 427
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + + S +CC GFCID+L K ++ + FTY+L V +GK G +
Sbjct: 428 CRKYFRLNNSTTE------GTSVKKCCKGFCIDILKKLSKTVKFTYDLYLVTNGKHGKK 480
>gi|397485351|ref|XP_003846222.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
3B [Pan paniscus]
Length = 952
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKDIVWPGNSHT---PPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW LD++ PG + PPQG + L++ L E P++ PD G+C
Sbjct: 298 SWRDGQLDLE----PGGASARPPPPQGAQVRPKLRVVTLLEHPFVFARDPDE-DGQCPA- 351
Query: 89 RGVICRVAGDAD---MDKIDVAMAHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C G D +D + A+A+ + + +CC G+CIDLL + AE+ F +EL V
Sbjct: 352 -GQLCLDPGTNDSATLDALFAALANGSVPRALCKCCYGYCIDLLERLAEDTPFDFELYIV 410
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 411 GDGKYGALRD 420
>gi|397492248|ref|XP_003817039.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 1 [Pan
paniscus]
Length = 938
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + A CC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPNDTSPGSRECAGQG-------CCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>gi|397492250|ref|XP_003817040.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 2 [Pan
paniscus]
Length = 885
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + A CC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPNDTSPGSRECAGQ-------GCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>gi|397492258|ref|XP_003817044.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 6 [Pan
paniscus]
Length = 906
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + A CC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 458 TGPNDTSPGSRECAGQ-------GCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 510
Query: 154 L 154
+
Sbjct: 511 V 511
>gi|397492256|ref|XP_003817043.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 5 [Pan
paniscus]
Length = 943
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + A CC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 458 TGPNDTSPGSRECAGQG-------CCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 510
Query: 154 L 154
+
Sbjct: 511 V 511
>gi|397492252|ref|XP_003817041.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 3 [Pan
paniscus]
Length = 922
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + A CC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPNDTSPGSRECAGQ-------GCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>gi|395533061|ref|XP_003768582.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-3 [Sarcophilus
harrisii]
Length = 1145
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 11/121 (9%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE+ + +K VWP T Q V + HL + LEE P++ + PD TG C N V
Sbjct: 380 WEQGIIHMKYPVWP-RYGTYLQPVVDNRHLTVATLEERPFVIVESPDSSTGGCIPNT-VP 437
Query: 93 CRVAGD-ADMDKIDVAMAHHNESFYQ-CCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
CR + D D +S+ + CC GFCID+L K A+ + F+Y+L V +GK G
Sbjct: 438 CRKQSNRTDSDG-------PGDSYTKLCCKGFCIDILKKLAKGVKFSYDLYLVTNGKHGK 490
Query: 151 Q 151
+
Sbjct: 491 K 491
>gi|397492254|ref|XP_003817042.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 isoform 4 [Pan
paniscus]
Length = 959
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + A CC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 458 TGPNDTSPGSRECAGQG-------CCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 510
Query: 154 L 154
+
Sbjct: 511 V 511
>gi|332639734|pdb|3OEK|A Chain A, Crystal Structure Of Glun2d Ligand-Binding Core In Complex
With L- Aspartate
gi|332639735|pdb|3OEL|A Chain A, Crystal Structure Of Glun2d Ligand-Binding Core In Complex
With D- Glutamate
gi|332639736|pdb|3OEM|A Chain A, Crystal Structure Of Glun2d Ligand-Binding Core In Complex
With N- Methyl-D-Aspartate
gi|332639737|pdb|3OEN|A Chain A, Crystal Structure Of Glun2d Ligand-Binding Core In Complex
With L- Glutamate
Length = 286
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 61 HLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCS 120
HL + LEE P++ + P DP++G C + V CR + +++ +CC
Sbjct: 6 HLTVATLEERPFVIVEPADPISGTC-IRDSVPCR----SQLNRTHSPPPDAPRPEKRCCK 60
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCID+L + A +GF+Y+L V +GK G + D
Sbjct: 61 GFCIDILKRLAHTIGFSYDLYLVTNGKHGKKID 93
>gi|341914128|ref|XP_003403748.1| PREDICTED: glutamate [NMDA] receptor subunit 3B [Homo sapiens]
Length = 1138
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKDIVWPGNSHT---PPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW LD + PG + PPQG + L++ L E P++ PD G+C
Sbjct: 483 SWRDGQLDSE----PGGASARPPPPQGAQVRPKLRVVTLLEHPFVFARDPDE-DGQCPA- 536
Query: 89 RGVICRVAGDAD---MDKIDVAMAHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C G D +D + A+A+ + + +CC G+CIDLL + AE+ F +EL V
Sbjct: 537 -GQLCLDPGTNDSATLDALFAALANGSAPRALRKCCYGYCIDLLERLAEDTPFDFELYLV 595
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 596 GDGKYGALRD 605
>gi|68164778|gb|AAY87407.1| NMDA receptor subunit 1 isoform [Gallus gallus]
Length = 888
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 56/122 (45%), Gaps = 18/122 (14%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN--------RGVI 92
+ I+WPG PQG LKI + + P++ + P G C + V
Sbjct: 398 RKIIWPGGETEKPQGYQMSTKLKIVTIHQEPFVYVKPTQ-ADGTCREEFTINGDPVKKVF 456
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
C + + VA+ CC GFCIDLL + A + FTYE+ V DGK+GTQE
Sbjct: 457 CTGPNETIPGRPTVAL---------CCYGFCIDLLIRLAGVMNFTYEVHLVADGKFGTQE 507
Query: 153 DL 154
+
Sbjct: 508 RV 509
>gi|410905663|ref|XP_003966311.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-4-like
[Takifugu rubripes]
Length = 1462
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 18/126 (14%)
Query: 33 WEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRG 90
WE L ++ W G PP + HL + LEE P++ + DP +G C +
Sbjct: 406 WENGVLRLRYPAWSRYGPFLQPPD---DAQHLHVVTLEERPFVIVELADPASGTC-IRDS 461
Query: 91 VICRVAGDADMDKIDVAMAHHNES---FYQCCSGFCIDLLGKFAEELGFTYELVRVEDGK 147
V CR + ++ +NE QCC GFCID+L + A+ +GFTY+L V +GK
Sbjct: 462 VPCRRP---------LNISAYNEGVAPMKQCCKGFCIDILKRLAKIVGFTYDLYLVTNGK 512
Query: 148 WGTQED 153
G + D
Sbjct: 513 HGKKID 518
>gi|47216887|emb|CAG11694.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1379
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 61 HLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVA--MAHHNESFYQC 118
HL++ LEE P++ + P DP T C + V CR+ + + +D A M H C
Sbjct: 793 HLRVVTLEERPFVIVEPADPGTSSC-IRDSVPCRMPVNISL-AVDGAGPMKH-------C 843
Query: 119 CSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
C GFCID+L + A+ +GFTY+L V +G+ G D
Sbjct: 844 CKGFCIDVLKRLAKNVGFTYDLYLVTNGRHGKNID 878
>gi|326930178|ref|XP_003211228.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1-like [Meleagris
gallopavo]
Length = 925
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 56/122 (45%), Gaps = 18/122 (14%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN--------RGVI 92
+ I+WPG PQG LKI + + P++ + P G C + V
Sbjct: 382 RKIIWPGGETEKPQGYQMSTKLKIVTIHQEPFVYVKPTQ-ADGTCREEFTINGDPVKKVF 440
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
C + + VA+ CC GFCIDLL + A + FTYE+ V DGK+GTQE
Sbjct: 441 CTGPNETIPGRPTVAL---------CCYGFCIDLLIRLAGVMNFTYEVHLVADGKFGTQE 491
Query: 153 DL 154
+
Sbjct: 492 RV 493
>gi|1199923|dbj|BAA11898.1| N-methyl-D-aspartate receptor type1 [Anas platyrhynchos]
Length = 965
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 56/122 (45%), Gaps = 18/122 (14%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN--------RGVI 92
+ I+WPG PQG LKI + + P++ + P G C + V
Sbjct: 377 RKIIWPGGETEKPQGYQMSTKLKIVTIHQEPFVYVKPTQ-ADGTCREEFTINGDPVKKVF 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
C + + VA+ CC GFCIDLL + A + FTYE+ V DGK+GTQE
Sbjct: 436 CTGPNETIPGRPTVAL---------CCYGFCIDLLIRLAGVMNFTYEVHLVADGKFGTQE 486
Query: 153 DL 154
+
Sbjct: 487 RV 488
>gi|46195826|ref|NP_996862.1| glutamate [NMDA] receptor subunit zeta-1 precursor [Gallus gallus]
gi|41019338|gb|AAR98574.1| N-methyl-D-aspartate receptor type 1 subunit precursor [Gallus
gallus]
Length = 965
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 56/122 (45%), Gaps = 18/122 (14%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN--------RGVI 92
+ I+WPG PQG LKI + + P++ + P G C + V
Sbjct: 377 RKIIWPGGETEKPQGYQMSTKLKIVTIHQEPFVYVKPTQ-ADGTCREEFTINGDPVKKVF 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
C + + VA+ CC GFCIDLL + A + FTYE+ V DGK+GTQE
Sbjct: 436 CTGPNETIPGRPTVAL---------CCYGFCIDLLIRLAGVMNFTYEVHLVADGKFGTQE 486
Query: 153 DL 154
+
Sbjct: 487 RV 488
>gi|115529246|ref|NP_001070161.1| glutamate [NMDA] receptor subunit zeta-1 precursor [Taeniopygia
guttata]
gi|49425248|gb|AAT66021.1| N-methyl-D-aspartate receptor 1 subunit [Taeniopygia guttata]
Length = 965
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 56/122 (45%), Gaps = 18/122 (14%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN--------RGVI 92
+ I+WPG PQG LKI + + P++ + P G C + V
Sbjct: 377 RKIIWPGGETEKPQGYQMSTKLKIVTIHQEPFVYVKPTQ-ADGTCREEFTINGDPVKKVF 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
C + + VA+ CC GFCIDLL + A + FTYE+ V DGK+GTQE
Sbjct: 436 CTGPNETIPGRPTVAL---------CCYGFCIDLLIRLAGVMNFTYEVHLVADGKFGTQE 486
Query: 153 DL 154
+
Sbjct: 487 RV 488
>gi|62988346|ref|NP_619635.1| glutamate receptor ionotropic, NMDA 3B precursor [Homo sapiens]
gi|71153527|sp|O60391.2|NMD3B_HUMAN RecName: Full=Glutamate receptor ionotropic, NMDA 3B; Short=GluN3B;
AltName: Full=N-methyl-D-aspartate receptor subtype 3B;
Short=NMDAR3B; Short=NR3B; Flags: Precursor
gi|59891574|tpg|DAA04570.1| TPA_exp: NMDA receptor 3B subunit [Homo sapiens]
gi|162317684|gb|AAI56391.1| Glutamate receptor, ionotropic, N-methyl-D-aspartate 3B [synthetic
construct]
Length = 1043
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKDIVWPGNSHT---PPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW LD++ PG + PPQG L++ L E P++ PD G+C
Sbjct: 388 SWRDGQLDLE----PGGASARPPPPQGAQVWPKLRVVTLLEHPFVFARDPDE-DGQCPA- 441
Query: 89 RGVICRVAGDAD---MDKIDVAMAHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C G D +D + A+A+ + + +CC G+CIDLL + AE+ F +EL V
Sbjct: 442 -GQLCLDPGTNDSATLDALFAALANGSAPRALRKCCYGYCIDLLERLAEDTPFDFELYLV 500
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 501 GDGKYGALRD 510
>gi|68164779|gb|AAY87408.1| NMDA receptor subunit 1 [Gallus gallus]
Length = 986
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 56/122 (45%), Gaps = 18/122 (14%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN--------RGVI 92
+ I+WPG PQG LKI + + P++ + P G C + V
Sbjct: 398 RKIIWPGGETEKPQGYQMSTKLKIVTIHQEPFVYVKPTQ-ADGTCREEFTINGDPVKKVF 456
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
C + + VA+ CC GFCIDLL + A + FTYE+ V DGK+GTQE
Sbjct: 457 CTGPNETIPGRPTVAL---------CCYGFCIDLLIRLAGVMNFTYEVHLVADGKFGTQE 507
Query: 153 DL 154
+
Sbjct: 508 RV 509
>gi|20142345|tpg|DAA00018.1| TPA_exp: NMDA type glutamate receptor subunit NR3B precursor [Homo
sapiens]
Length = 890
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKDIVWPGNSHT---PPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW LD++ PG + PPQG L++ L E P++ PD G+C
Sbjct: 388 SWRDGQLDLE----PGGASARPPPPQGAQVWPKLRVVTLLEHPFVFARDPDE-DGQCPA- 441
Query: 89 RGVICRVAGDAD---MDKIDVAMAHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C G D +D + A+A+ + + +CC G+CIDLL + AE+ F +EL V
Sbjct: 442 -GQLCLDPGTNDSATLDALFAALANGSAPRALRKCCYGYCIDLLERLAEDTPFDFELYLV 500
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 501 GDGKYGALRD 510
>gi|3025446|gb|AAC12680.1| R32184_2 [Homo sapiens]
Length = 901
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKDIVWPGNSHT---PPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW LD++ PG + PPQG L++ L E P++ PD G+C
Sbjct: 388 SWRDGQLDLE----PGGASARPPPPQGAQVWPKLRVVTLLEHPFVFARDPDE-DGQCPA- 441
Query: 89 RGVICRVAGDAD---MDKIDVAMAHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C G D +D + A+A+ + + +CC G+CIDLL + AE+ F +EL V
Sbjct: 442 -GQLCLDPGTNDSATLDALFAALANGSAPRALRKCCYGYCIDLLERLAEDTPFDFELYLV 500
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 501 GDGKYGALRD 510
>gi|449270027|gb|EMC80754.1| Glutamate [NMDA] receptor subunit zeta-1, partial [Columba livia]
Length = 901
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 56/122 (45%), Gaps = 18/122 (14%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN--------RGVI 92
+ I+WPG PQG LKI + + P++ + P G C + V
Sbjct: 313 RKIIWPGGETEKPQGYQMSTKLKIVTIHQEPFVYVKPTQ-ADGTCREEFTINGDPVKKVF 371
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
C + + VA+ CC GFCIDLL + A + FTYE+ V DGK+GTQE
Sbjct: 372 CTGPNETIPGRPTVAL---------CCYGFCIDLLIRLAGVMNFTYEVHLVADGKFGTQE 422
Query: 153 DL 154
+
Sbjct: 423 RV 424
>gi|395741238|ref|XP_003777552.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
zeta-1, partial [Pongo abelii]
Length = 936
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 346 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 405
Query: 94 RVAGD---ADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
D ++ A + QCC GFCIDLL K A + FTYE+ V DGK+GT
Sbjct: 406 TGPNDTSPGSPQQLPPAPTQPAQ-VPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGT 464
Query: 151 QEDL 154
QE +
Sbjct: 465 QERV 468
>gi|163140738|gb|ABY26543.1| NMDA receptor NR2A subunit [Apteronotus leptorhynchus]
Length = 1455
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/120 (35%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 33 WEKEGLDIKDIVWPG-NSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
WE L ++ VWP NS + ++ HL I LEE P++ + D +TG C M V
Sbjct: 368 WENHSLLLRFPVWPRYNSFGDAEA--DENHLSIVTLEEKPFVIVDDVDILTGTC-MRNSV 424
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + QCC GFCID+L K A + FTY+L V +GK G +
Sbjct: 425 PCRKHLKDNTTG--------GSYIKQCCKGFCIDILKKIARNVKFTYDLYLVTNGKHGKK 476
>gi|440906370|gb|ELR56640.1| Glutamate [NMDA] receptor subunit epsilon-4, partial [Bos grunniens
mutus]
Length = 760
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 9/125 (7%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPY---IQMSPPDPVTGKCNMN 88
SWE++ L +K +W Q V + HL + L E P+ + + P DP++G C +
Sbjct: 249 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLGERPFRPFVIVEPADPISGTC-IR 306
Query: 89 RGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
V CR + +++ +CC GFCID+L + A+ +GF+Y+L V +GK
Sbjct: 307 DSVPCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAQTIGFSYDLYLVTNGKH 362
Query: 149 GTQED 153
G + D
Sbjct: 363 GKKID 367
>gi|449479397|ref|XP_002191002.2| PREDICTED: glutamate [NMDA] receptor subunit epsilon-3 [Taeniopygia
guttata]
Length = 1059
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WEK + +K VWP + Q V + HL + LEE P++ + DP TG C N V
Sbjct: 378 WEKGIIHMKYPVWP-RYGSFMQPVVDNRHLTVATLEERPFVIVENTDPSTGVCVRNT-VP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
CR ++ + + CC GFCID+L K A+ + F+Y+L V +GK G
Sbjct: 436 CRKQTNSSQSGDGLVDPYTK----LCCKGFCIDILKKLAKAVKFSYDLYLVTNGKHG 488
>gi|224593255|ref|NP_001137603.1| glutamate receptor, ionotropic, N-methyl D-aspartate 1b precursor
[Danio rerio]
Length = 937
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 22 TSGICIGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPV 81
T + +GV+ + + I+WPG P+G LKI + + P++ + P
Sbjct: 376 TRLVQVGVYNGSQVVMNAQRKIIWPGGETEKPKGYQMSTRLKIVTIHQEPFVYVKP---- 431
Query: 82 TGKCNMNRGVICRVAGDADMDKID-VAMAHHNESFY------QCCSGFCIDLLGKFAEEL 134
R C+ + KI V NE+ QCC GFCIDLL K A +
Sbjct: 432 -----TLRDGTCKEEHTVNGVKIKKVICTGPNETIPGRPIVPQCCYGFCIDLLIKLAFTM 486
Query: 135 GFTYELVRVEDGKWGTQEDL 154
FTYE+ V DGK+GTQE +
Sbjct: 487 NFTYEVHLVADGKFGTQERV 506
>gi|395831281|ref|XP_003788732.1| PREDICTED: glutamate [NMDA] receptor subunit 3B [Otolemur
garnettii]
Length = 1040
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 31 KSWEKEGLDIKDIVWPGNSHTPP--QGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
+SW+ LD++ G + PP QG L++ L E P++ PD G+C
Sbjct: 387 RSWQDGQLDLEA---GGAAVRPPPLQGAQAPPKLRVVTLVEHPFVFAREPDE-DGQCPA- 441
Query: 89 RGVIC---RVAGDADMDKIDVAMAHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C R A +D + A+A+ + S +CC G+CIDLL + AE+ F +EL V
Sbjct: 442 -GQLCLDPRTNDSATLDTLFAALANGSVPHSLRKCCYGYCIDLLEQLAEDTPFDFELYIV 500
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 501 GDGKYGALRD 510
>gi|156368325|ref|XP_001627645.1| predicted protein [Nematostella vectensis]
gi|156214561|gb|EDO35545.1| predicted protein [Nematostella vectensis]
Length = 893
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 26/116 (22%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKC-----NMNRGVICR- 94
+ I+WPGN +T P GV HL++ L P++ + P P +G+C N + V+C
Sbjct: 375 ESIIWPGNLNTTPTGVFLSNHLRVVTLVGEPFVYVKPI-PTSGRCSDLDTNTAKHVLCTG 433
Query: 95 VAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
D D SGFC+DLL + E++ FTY + EDG +G+
Sbjct: 434 TVSDTD-------------------SGFCMDLLIRLGEKVNFTYSVSLSEDGSYGS 470
>gi|432882565|ref|XP_004074093.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-4-like,
partial [Oryzias latipes]
Length = 683
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 61 HLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCS 120
HL++ LEE P++ + P DP T C + V CR+ ++ + + CC
Sbjct: 538 HLRVVTLEERPFVIVEPADPGTSSC-IRDSVPCRMPINSSL------VVEGATPMKHCCK 590
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCID+L + A+ +GFTY+L V +G+ G D
Sbjct: 591 GFCIDVLKRLAKIVGFTYDLYLVTNGRHGKNID 623
>gi|443724904|gb|ELU12705.1| hypothetical protein CAPTEDRAFT_179176 [Capitella teleta]
Length = 923
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 18/130 (13%)
Query: 27 IGVWKSWE---KEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTG 83
IG +++ + +E + + I+WPGN P+G+ +L++ +E P+I P G
Sbjct: 362 IGTYRANDPTWRENMQPQSIIWPGNQPQVPKGIKISTYLRVVTIEAKPFIYADPATQTGG 421
Query: 84 KCNMN-RGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
C + + + C D+D CC G+ IDLL + ++++ FT+ L
Sbjct: 422 DCGLEIKKIHCPKYNSTDVD--------------MCCYGYAIDLLLELSKKVNFTFNLHI 467
Query: 143 VEDGKWGTQE 152
VED ++G E
Sbjct: 468 VEDTQYGELE 477
>gi|332255816|ref|XP_003277024.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
3B [Nomascus leucogenys]
Length = 1045
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKDIVWPGNSHT---PPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW LD++ PG + PP G + L++ L E P++ PD G+C
Sbjct: 388 SWRDGQLDLE----PGGASARPPPPPGAQARPKLRVVTLVEHPFVFARDPDE-DGQCPA- 441
Query: 89 RGVICRVAGDADMDKIDVAMAHHN-----ESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C G D +D A + +CC G+CIDLL + AE+ F +EL V
Sbjct: 442 -GQLCLDPGTNDSATLDALFAELANGSVPRALRKCCYGYCIDLLERLAEDTPFDFELYIV 500
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 501 GDGKYGALRD 510
>gi|47221652|emb|CAF97917.1| unnamed protein product [Tetraodon nigroviridis]
Length = 750
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 18/126 (14%)
Query: 33 WEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRG 90
WE L ++ W G PP + HL + LEE P++ + DP +G C +
Sbjct: 290 WENGVLRLRYPAWSRYGPFLQPPD---DAQHLHVVTLEERPFVIVELADPASGTC-IRDS 345
Query: 91 VICRVAGDADMDKIDVAMAHHNES---FYQCCSGFCIDLLGKFAEELGFTYELVRVEDGK 147
V CR + ++ +NE QCC GFCID+L + A+ +GFTY+L V +GK
Sbjct: 346 VPCRRP---------LNISAYNEGVAPMKQCCKGFCIDILKRLAKIVGFTYDLYLVTNGK 396
Query: 148 WGTQED 153
G + D
Sbjct: 397 HGKKID 402
>gi|344243376|gb|EGV99479.1| Glutamate [NMDA] receptor subunit 3B [Cricetulus griseus]
Length = 773
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKDIVWPGNS--HTP-PQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW+ LD + PG + P P G + L++ L E P++ D G+C
Sbjct: 261 SWQDGQLDFE----PGAAAIRVPSPSGTEARPKLRVVTLVEHPFVFTRESDE-DGQCPA- 314
Query: 89 RGVICRVAGDADMDKIDV---AMAHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C +G D ++D A+A+ + S +CC G+CIDLL + AE+L F +EL V
Sbjct: 315 -GQLCLDSGTNDSARLDALFAALANGSVPRSLRRCCYGYCIDLLERLAEDLAFDFELYIV 373
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 374 GDGKYGALRD 383
>gi|334322930|ref|XP_001378152.2| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-3 [Monodelphis domestica]
Length = 1270
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE+ + +K VWP Q V + HL + LEE P++ + PD TG C N V
Sbjct: 380 WEQGIIHMKYPVWP-RYGAYLQPVVDNRHLTVATLEERPFVIVESPDSSTGGCIPNT-VP 437
Query: 93 CRVAGD-ADMDKIDVAMAHHNESFYQ-CCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
CR + D D +S+ + CC GFCID+L K A+ + F+Y+L V +GK G
Sbjct: 438 CRKQSNRTDSDG-------PGDSYTKLCCKGFCIDILKKLAKGVKFSYDLYLVTNGKHGK 490
Query: 151 Q 151
+
Sbjct: 491 K 491
>gi|410052839|ref|XP_003954561.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
3B [Pan troglodytes]
Length = 610
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 52 PPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDAD---MDKIDVAM 108
PPQG + L++ L E P++ PD G+C G +C G D +D + A+
Sbjct: 240 PPQGAQVRPKLRVVTLLEHPFVFARDPDE-DGQCPA--GQLCLDPGTNDSATLDALFAAL 296
Query: 109 AHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
A+ + + +CC G+CIDLL + AE+ F +EL V DGK+G D
Sbjct: 297 ANGSVPRALCKCCYGYCIDLLERLAEDTPFDFELYIVGDGKYGALRD 343
>gi|354480926|ref|XP_003502654.1| PREDICTED: glutamate [NMDA] receptor subunit 3B [Cricetulus
griseus]
Length = 841
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKDIVWPGNS--HTP-PQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW+ LD + PG + P P G + L++ L E P++ D G+C
Sbjct: 285 SWQDGQLDFE----PGAAAIRVPSPSGTEARPKLRVVTLVEHPFVFTRESDE-DGQCPA- 338
Query: 89 RGVICRVAGDADMDKIDV---AMAHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C +G D ++D A+A+ + S +CC G+CIDLL + AE+L F +EL V
Sbjct: 339 -GQLCLDSGTNDSARLDALFAALANGSVPRSLRRCCYGYCIDLLERLAEDLAFDFELYIV 397
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 398 GDGKYGALRD 407
>gi|125812378|ref|XP_691754.2| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1 [Danio
rerio]
Length = 1455
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 18/124 (14%)
Query: 33 WEKEGLDIKDIVWP-----GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNM 87
WE + L +K VWP G++ T + HL I LEE P++ + + +TG C M
Sbjct: 370 WENQSLTLKYPVWPRFNSFGDAET------DDNHLTIVTLEEKPFVIVENVERLTGTC-M 422
Query: 88 NRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGK 147
V CR D +CC GFCID+L K A + FTY+L V +GK
Sbjct: 423 RNSVPCRKHIK------DNTTEGGGTYIKKCCKGFCIDILKKIARNVKFTYDLYLVTNGK 476
Query: 148 WGTQ 151
G +
Sbjct: 477 HGKK 480
>gi|390458555|ref|XP_003732140.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
zeta-1 [Callithrix jacchus]
Length = 943
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FT + V DGK+GTQE
Sbjct: 458 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTXRVHLVADGKFGTQER 510
Query: 154 L 154
+
Sbjct: 511 V 511
>gi|327280687|ref|XP_003225083.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-4-like [Anolis
carolinensis]
Length = 1325
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 12/137 (8%)
Query: 15 LFHPTIFTSGICIGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQ 74
L +P++ + I + ++WE G + I+ Q V + HL + LEE P++
Sbjct: 347 LINPSL--AVISLSKDRTWEVVGRWERRILSMSRFRKFLQPVDDNKHLMVATLEERPFVI 404
Query: 75 MSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEEL 134
+ DP T C + V CR ++ ++H E +CC GFCID+L + A+ L
Sbjct: 405 VDDIDPATKTC-IRDSVPCR-------HPVNRTNSNHLEK--RCCKGFCIDILKRLAKTL 454
Query: 135 GFTYELVRVEDGKWGTQ 151
GFTY+L V +GK G +
Sbjct: 455 GFTYDLYLVTNGKHGKK 471
>gi|163140747|gb|ABY26544.1| NMDA receptor NR2C subunit [Apteronotus leptorhynchus]
Length = 1420
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 14/125 (11%)
Query: 31 KSWEKEG------LDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGK 84
+ W+K G L ++ VWP T + V + HL + LEE P++ + DP+TG
Sbjct: 377 RQWDKVGSYESGILQMRYPVWP-RYGTFLEPVSDNRHLTVATLEERPFVIVEAVDPITGT 435
Query: 85 CNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYE--LVR 142
C ++ V CR +K +V + CC GFCID+L K + + F+Y+ LV
Sbjct: 436 C-LSNTVPCR----RQSNKTEVIVGDTEPYTKLCCKGFCIDILKKLSRNIKFSYDLYLVT 490
Query: 143 VEDGK 147
+ GK
Sbjct: 491 TQHGK 495
>gi|363740989|ref|XP_003642415.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-3-like [Gallus
gallus]
Length = 1060
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + +K VWP + Q V + HL + LEE P++ + DP TG C N V
Sbjct: 375 WEHGIIHMKYPVWP-RYGSFLQPVVDNRHLTVATLEERPFVIVENTDPSTGVCVRNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
CR +A +A CC GFCID+L K A+ + F+Y+L V +GK G
Sbjct: 433 CRKQTNASASD---GLADPYTKL--CCKGFCIDILKKLAKTVKFSYDLYLVTNGKHG 484
>gi|328712650|ref|XP_001949860.2| PREDICTED: glutamate [NMDA] receptor subunit 1-like [Acyrthosiphon
pisum]
Length = 976
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 35 KEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICR 94
K L+ +I+WPG P+G HLK+ +EE P++ + P G + ++C
Sbjct: 400 KLRLNESNIIWPGRLKKKPEGFMIPTHLKVLTIEEKPFVYVRPLKKDDGNSCKSDEIMCP 459
Query: 95 VAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
+ + + E CC G+CIDLL + +E + FTY L DG++G E
Sbjct: 460 LYNTS---------SKVLEPIVYCCKGYCIDLLVELSETINFTYSLSLSPDGQFGNYE 508
>gi|291228274|ref|XP_002734104.1| PREDICTED: glutamate receptor, ionotropic, N-methyl-D-aspartate
3B-like [Saccoglossus kowalevskii]
Length = 834
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 14/138 (10%)
Query: 27 IGVWK---SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTG 83
+ WK WE ++ I+WPGNS + P GV + L + +E+ P+I +S P V+
Sbjct: 371 LSYWKELGKWENGDFSMEAIIWPGNSVSLPNGVNTEKVLIVANIEK-PFIVVSTPLDVSF 429
Query: 84 KCNMNRGVICRVAGDADMDKIDVAMAHHNE--------SFYQCCSGFCIDLLGKFAEELG 135
C GV+C A + + I+ A A ++E +CCSG IDL+ ++
Sbjct: 430 DCLT--GVLCLQAVNGTREDIEKAFAEYDEPTVHGNYTDMKRCCSGLGIDLIESLRIDVE 487
Query: 136 FTYELVRVEDGKWGTQED 153
F Y L V D G E+
Sbjct: 488 FNYNLYLVADENHGAFEN 505
>gi|348536142|ref|XP_003455556.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1 [Oreochromis
niloticus]
Length = 435
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKC----NMNRGVICRVA 96
+ I+WPG P G LKI + + P++ + P G C +N +I +V
Sbjct: 129 RKIIWPGGETEKPVGYQMSTRLKIVTIHQEPFVYVKPTKS-DGTCKEEYTVNGVLIKKVI 187
Query: 97 GDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
I QCC GFCIDLL K A + FTYE+ V DGK+GTQE +
Sbjct: 188 CTGPNGTIP-----GQPIVPQCCYGFCIDLLIKLAMSMNFTYEVHLVADGKFGTQERV 240
>gi|46277636|gb|AAS87020.1| NMDA receptor subunit 3B [Homo sapiens]
Length = 1043
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKD---IVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW LD++ WP PPQG + L + L E P++ PD G+C
Sbjct: 388 SWRDGQLDLEPGGASAWP----PPPQGAQVRPKLHVVTLLEHPFVFARDPDE-DGQCPA- 441
Query: 89 RGVICRVAGDAD---MDKIDVAMAHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C G D +D + A+A+ + + +CC G+CIDLL + AE+ +EL V
Sbjct: 442 -GQLCLDPGTNDSATLDALFAALANGSAPRALRKCCYGYCIDLLERLAEDTPXEFELYPV 500
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 501 GDGKYGALRD 510
>gi|102221214|gb|ABC71922.1| NMDA receptor subunit NR1a [Oreochromis mossambicus]
Length = 935
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 18/122 (14%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN--------MNRGVI 92
+ I+WPG P G LKI + + P++ + P G C + + VI
Sbjct: 395 RKIIWPGGETEKPVGYQMSTRLKIVTIHQEPFVYVKPTKS-DGTCKEEYTVNGVLIKKVI 453
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
C + V QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 454 CTGPNGTIPGQPIVP---------QCCYGFCIDLLIKLAMSMNFTYEVHLVADGKFGTQE 504
Query: 153 DL 154
+
Sbjct: 505 RV 506
>gi|326663791|ref|XP_699070.5| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1 [Danio
rerio]
Length = 1444
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 54/119 (45%), Gaps = 10/119 (8%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP + E HL I LEE P++ + D +TG C M V
Sbjct: 367 WENHSLRLKFPVWPRYNSFGDMDADEN-HLSIVTLEERPFVIVDDVDILTGTC-MRNSVP 424
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR K +CC GFCID+L K A + FTY+L V +GK G +
Sbjct: 425 CR--------KHIKDNTTEGSYVKKCCKGFCIDILKKIARNVKFTYDLYLVTNGKHGKK 475
>gi|109126367|ref|XP_001106155.1| PREDICTED: glutamate [NMDA] receptor subunit 3B-like, partial
[Macaca mulatta]
Length = 344
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 32 SWEKEGLDIKDIVWPGNSHT---PPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW LD++ PG + PP G + L++ L E P++ PD G+C
Sbjct: 48 SWRDGQLDLE----PGGAAARPPPPLGAQARPRLRVVTLVEHPFVFARDPDE-DGQCPAG 102
Query: 89 RGVICRVAGD-ADMDKIDVAMAHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRVED 145
+ + D A +D + A+A+ + + +CC G+CIDLL + AE+ F +EL V D
Sbjct: 103 QLCLDPSTNDSATLDALFAALANGSVPRALRKCCYGYCIDLLERLAEDTPFDFELYIVGD 162
Query: 146 GKWGTQED 153
GK+G D
Sbjct: 163 GKYGALRD 170
>gi|326674769|ref|XP_001921725.2| PREDICTED: hypothetical protein LOC100149482 [Danio rerio]
Length = 1926
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 33 WEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRG 90
WE L ++ W G PP + HL++ LEE P++ + D +G C +
Sbjct: 407 WENGVLRLRYPAWSRYGPFLQPPD---DAQHLRVVTLEERPFVIVELADAASGTC-IRDS 462
Query: 91 VICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
V CR +A +A QCC GFCID+L + A +GFTY+L V +GK G
Sbjct: 463 VPCRRPLNASSSPPIEGVA----PVKQCCKGFCIDILKRLARIVGFTYDLYLVTNGKHGK 518
Query: 151 QED 153
+ D
Sbjct: 519 KID 521
>gi|47220672|emb|CAG06594.1| unnamed protein product [Tetraodon nigroviridis]
Length = 960
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 14/132 (10%)
Query: 25 ICIGVWKSWEKEG------LDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPP 78
I + + W+K G L ++ VWP + V + HL + LEE P++ +
Sbjct: 382 IALDRERIWDKVGTYARGILQVRYPVWPRYGSFLDK-VSDDRHLTVATLEEHPFVMVENV 440
Query: 79 DPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQ-CCSGFCIDLLGKFAEELGFT 137
DP TG C N V CR + ++ H E++ + CC GFCID+L K + + F+
Sbjct: 441 DPGTGTCVRNT-VPCRRQSNHTE-----SIFSHPEAYTKLCCKGFCIDILKKLSRNIKFS 494
Query: 138 YELVRVEDGKWG 149
Y+L V +GK G
Sbjct: 495 YDLYLVTNGKHG 506
>gi|46277638|gb|AAS87021.1| NMDA receptor subunit 3B [Homo sapiens]
Length = 1043
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKD---IVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW LD++ WP PPQG + L++ L E P + PD +C
Sbjct: 388 SWRDGQLDLEPGGASAWP----PPPQGAQVRPKLRVVTLLEHPCVFARDPDE-DEQCPA- 441
Query: 89 RGVICRVAGDAD---MDKIDVAMAHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C G D +D + A+A+ + + +CC G+CIDLL + AE+ F +EL V
Sbjct: 442 -GQLCLDPGTNDSAPLDALFAALANGSAPRALRKCCYGYCIDLLERLAEDTPFDFELYLV 500
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 501 SDGKYGALRD 510
>gi|205362479|emb|CAP08279.1| N-methyl D-aspartate receptor subunit 2D [Carassius carassius]
Length = 364
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKF-HLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
WE L ++ W + ++P P+ HL++ LEE ++ + DP +G C + V
Sbjct: 213 WENGVLRLRYPAW--SRYSPFLQPPDDAQHLRVVTLEERXFVIVELADPSSGTC-IRDSV 269
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR +A + VA QCC GFCID+L + A +GFTY+L V +GK G +
Sbjct: 270 PCRRPLNASALQEGVA------PMKQCCKGFCIDILKRLARIVGFTYDLYLVTNGKHGKK 323
Query: 152 ED 153
D
Sbjct: 324 ID 325
>gi|410922389|ref|XP_003974665.1| PREDICTED: glutamate [NMDA] receptor subunit zeta-1-like [Takifugu
rubripes]
Length = 933
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 55/122 (45%), Gaps = 18/122 (14%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN--------MNRGVI 92
+ I+WPG P G LKI + + P++ + P G C + + VI
Sbjct: 428 RKIIWPGGELEKPVGYQMSTKLKIVTIHQEPFVYVKPTKS-DGTCKEEFTVNGVLIKKVI 486
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
C + V QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 487 CTGPNGTIPGQPIVP---------QCCYGFCIDLLIKLAMSMNFTYEVHLVADGKFGTQE 537
Query: 153 DL 154
+
Sbjct: 538 RV 539
>gi|426230961|ref|XP_004009527.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
3B, partial [Ovis aries]
Length = 994
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 33 WEKEGLDIKDIVWPGNSHTPP-QGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
W+ L+++ W +PP G + L++ L E P++ PD G+C G
Sbjct: 347 WQDGRLELE--AWGAAERSPPLPGAQARPKLRVVTLVEHPFVFARQPDE-DGRCPA--GQ 401
Query: 92 ICRVAGDAD---MDKIDVAMAHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDG 146
+C G D +D + A+A + + +CC G+CIDLL + AE+ F +EL V DG
Sbjct: 402 LCLAPGTNDSATLDALFAALADGSAPRALRRCCYGYCIDLLERLAEDTPFDFELYIVGDG 461
Query: 147 KWGTQED 153
K+G D
Sbjct: 462 KYGALRD 468
>gi|348558190|ref|XP_003464901.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-3-like [Cavia porcellus]
Length = 1186
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 398 WDHGVLYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 455
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQ-CCSGFCIDLLGKFAEELGFTYELVRV 143
CR + D A S+ + CC GFCID+L K + + F+Y+L V
Sbjct: 456 CRRKSNQTFRSGDTA------SYTRLCCRGFCIDILKKLPKVVKFSYDLYLV 501
>gi|312384924|gb|EFR29534.1| hypothetical protein AND_01381 [Anopheles darlingi]
Length = 507
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 28/125 (22%)
Query: 34 EKEGLDIKD--IVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
K L I D I WPGN+ P+G+ HLK+ +EE P+ V
Sbjct: 235 RKMRLKINDSSITWPGNTGKKPEGIMIPTHLKVLTIEEKPF------------------V 276
Query: 92 ICRVAGDADMDKID-------VAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
R D ++D D +++ NE Y CC G+CIDLL A+ + FTY+L
Sbjct: 277 YARKLLDDEIDCADDEVVCPHFNISNGNEQEY-CCKGYCIDLLKALAQRINFTYDLALSP 335
Query: 145 DGKWG 149
DG++G
Sbjct: 336 DGQFG 340
>gi|158301995|ref|XP_321646.3| AGAP001478-PA [Anopheles gambiae str. PEST]
gi|157012740|gb|EAA00817.3| AGAP001478-PA [Anopheles gambiae str. PEST]
Length = 966
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 14/118 (11%)
Query: 34 EKEGLDIKD--IVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
K L I D I WPGN+ P+G+ HLK+ +EE P+ V + ++ +
Sbjct: 386 RKMRLKINDSSITWPGNTGKKPEGIMIPTHLKVLTIEEKPF--------VYARKLLDDEI 437
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
C D ++ + + NE Y CC G+CIDLL A+ + FTY+L DG++G
Sbjct: 438 DC---ADDEVVCPHFNITNGNEQEY-CCKGYCIDLLKALAQRINFTYDLALSPDGQFG 491
>gi|357629457|gb|EHJ78211.1| putative NMDA-type glutamate receptor 1 [Danaus plexippus]
Length = 924
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 19/122 (15%)
Query: 31 KSWEKEGLDIKD--IVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
K +K L++K+ I+W G S T P+G HLK+ +EE P++ D T +C
Sbjct: 377 KDTQKMRLELKEHEIIWMGRSSTKPEGFMIPTHLKVLTIEEKPFVYARRVDDET-EC-FT 434
Query: 89 RGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
+ C H+N + CC GFC+DLL ++ + FTY L DG++
Sbjct: 435 EEIFC---------------PHYNTNQLYCCKGFCMDLLRYLSKAINFTYSLALSPDGQF 479
Query: 149 GT 150
G
Sbjct: 480 GN 481
>gi|47219645|emb|CAG02690.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1403
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/128 (34%), Positives = 60/128 (46%), Gaps = 16/128 (12%)
Query: 31 KSWEKEG------LDIKDIVWPG-NSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTG 83
+ WEK G L +K VWP NS + + HL I LEE P++ + + +TG
Sbjct: 225 REWEKMGKLDNGSLTVKYPVWPRFNSFGDAE--LDDNHLSIVTLEEKPFVIVEDVERLTG 282
Query: 84 KCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
C M V CR D +CC GFCID+L K A+ + FTY+L V
Sbjct: 283 TC-MRNSVPCR------KHIKDNTTEAGGTYIKKCCKGFCIDILKKIAKYVKFTYDLYLV 335
Query: 144 EDGKWGTQ 151
+GK G +
Sbjct: 336 TNGKHGKK 343
>gi|351714023|gb|EHB16942.1| Glutamate [NMDA] receptor subunit 3B [Heterocephalus glaber]
Length = 938
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SW LD+ V PP G + L++ L E P++ PD G+C G
Sbjct: 305 SWRDGHLDLDPGVVAARP-LPPPGTQARSKLRVVTLIEHPFVFAREPDE-DGQCPA--GH 360
Query: 92 ICRVAGDAD---MDKIDVAMAHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDG 146
+C G D +D + A+A+ + + +CC G+C+DLL + AE+ F +EL V DG
Sbjct: 361 LCLDPGTNDSATLDTLFAALANGSVPRALRKCCYGYCMDLLERLAEDAPFAFELYIVGDG 420
Query: 147 KWGTQED 153
K+G D
Sbjct: 421 KYGALRD 427
>gi|83753933|pdb|2A5S|A Chain A, Crystal Structure Of The Nr2a Ligand Binding Core In
Complex With Glutamate
gi|83753935|pdb|2A5T|B Chain B, Crystal Structure Of The Nr1NR2A LIGAND-Binding Cores
Complex
Length = 284
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 57 PEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFY 116
P+ HL I LEEAP++ + DP+T C N V CR KI+ + + +
Sbjct: 2 PDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNT-VPCR-----KFVKINNS-TNEGMNVK 54
Query: 117 QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
+CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 55 KCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 89
>gi|20376816|ref|NP_579842.2| glutamate receptor ionotropic, NMDA 3B precursor [Rattus
norvegicus]
gi|51701630|sp|Q8VHN2.2|NMD3B_RAT RecName: Full=Glutamate receptor ionotropic, NMDA 3B; Short=GluN3B;
AltName: Full=N-methyl-D-aspartate receptor subtype 3B;
Short=NMDAR3B; Short=NR3B; Flags: Precursor
gi|20331088|gb|AAL69893.2|AF440691_1 NMDA ligand-gated receptor 3B subunit [Rattus norvegicus]
Length = 1002
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKDIVWPGNS--HTP-PQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW+ LD + PG + P P G + L++ L E P++ D G+C
Sbjct: 388 SWQDGQLDFQ----PGAAALRVPSPSGTQARPKLRVVTLVEHPFVFTRESDE-DGQCPA- 441
Query: 89 RGVICRVAGDADMDKIDVAMA-----HHNESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C G D ++D A + +CC G+CIDLL + AE+L F +EL V
Sbjct: 442 -GQLCLDPGTNDSARLDALFAALVNGSVPRTLRRCCYGYCIDLLERLAEDLAFDFELYIV 500
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 501 GDGKYGALRD 510
>gi|441593621|ref|XP_004087090.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
3A [Nomascus leucogenys]
Length = 1466
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW++ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 799 SWQEGKIVMDYGIWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 857
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + DA +D + ++ N++ F +CC G+CIDLL + AE++ F ++L V
Sbjct: 858 LCLDPMTNDASTLDSLFSSLHSSNDTVPIKFKKCCYGYCIDLLERIAEDMNFDFDLYIVG 917
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 918 DGKYGAWKN 926
>gi|256079501|ref|XP_002576025.1| glutamate receptor NMDA [Schistosoma mansoni]
gi|360044590|emb|CCD82138.1| putative glutamate receptor, NMDA [Schistosoma mansoni]
Length = 742
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 27 IGVWKSWEKEG-----LDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDP- 80
+G W K G L I + WPG S++PP+G P KF L++ ++E P++ +
Sbjct: 162 VGTWSMSSKWGRSKSRLRIDGVTWPGASNSPPKGRPSKFKLRVVTIKEIPFVIYTKAQVR 221
Query: 81 -------VTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQ---CCSGFCIDLLGKF 130
+ + + V+ +++ ++ N S CCSG +DLL +
Sbjct: 222 LSYYTLLIKEGYELKYEYLHFVSNLPELNNVN-----ENSSISYVDGCCSGLTMDLLMEL 276
Query: 131 AEELGFTYELVRVEDGKWG 149
++L F E+ V+DG WG
Sbjct: 277 MKDLNFDVEMYEVKDGFWG 295
>gi|743475|prf||2012328A D-MeAsp receptor:ISOTYPE=NR1
Length = 885
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QC GFCIDL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPND-------TSPGSPRHTVPQCGYGFCIDLDIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>gi|301618355|ref|XP_002938585.1| PREDICTED: glutamate [NMDA] receptor subunit 3A-like [Xenopus
(Silurana) tropicalis]
Length = 1124
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P + HL++ L E P++ D G+C +
Sbjct: 495 SWQDRKIIMDYPLWPDQAQRHKSHYQQPARLHLRVVTLIEHPFVFTRNVDD-DGQCPAGQ 553
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N+S F +CC G+CIDLL K AE++ F ++L V
Sbjct: 554 LCLDPMTNDSKVLDSLFESLQGGNDSVPIEFKKCCYGYCIDLLEKLAEDMNFDFDLYIVG 613
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 614 DGKYGAWKN 622
>gi|341884306|gb|EGT40241.1| hypothetical protein CAEBREN_30060 [Caenorhabditis brenneri]
Length = 547
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 31 KSWEKEG------LDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGK 84
K+WEK G L + D+ WPG PPQG +KFH+K+ L E P+I +S DP T K
Sbjct: 450 KTWEKVGIFTNNELKMADVQWPGEKANPPQGAADKFHVKVVTLHEPPFITVSDVDPDTQK 509
Query: 85 CNMNR 89
C N+
Sbjct: 510 CPGNQ 514
>gi|432924649|ref|XP_004080659.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-3-like
[Oryzias latipes]
Length = 1375
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 14/126 (11%)
Query: 31 KSWEKEG------LDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGK 84
+ W+K G L ++ +WP + + V + HL + LEE P++ + DP TG
Sbjct: 372 RQWDKVGTFARGILQVRYPIWP-RYGSFLEHVSDDRHLTVATLEEHPFVMVENVDPGTGT 430
Query: 85 CNMNRGVICRVAGDADMDKIDVAMAHHNESFYQ-CCSGFCIDLLGKFAEELGFTYELVRV 143
C N V CR + ++ ES+ + CC GFCID+L K + + F+++L V
Sbjct: 431 CVRNT-VPCRRQSN-----YTESVFGPTESYTKLCCKGFCIDILKKLSRNIKFSFDLYLV 484
Query: 144 EDGKWG 149
+GK G
Sbjct: 485 TNGKHG 490
>gi|391333135|ref|XP_003740977.1| PREDICTED: glutamate [NMDA] receptor subunit 1-like [Metaseiulus
occidentalis]
Length = 973
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 13/123 (10%)
Query: 30 WKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
WK+ + ++++ ++WPG S P G HL++ L E P++ + + G+C N
Sbjct: 366 WKNEMELNINLEYVLWPGGSKEKPLGFVIPKHLRVATLAERPFVWTRQLNGM-GECYANE 424
Query: 90 GVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
+ + D++ CC G+C+DLL + +L F+Y+L VED ++G
Sbjct: 425 TLCPWYNRSSKSDEV------------YCCFGYCMDLLKVLSSKLNFSYDLYLVEDAQYG 472
Query: 150 TQE 152
E
Sbjct: 473 NLE 475
>gi|32378818|gb|AAP80570.1| NMDA-type glutamate receptor [Aplysia californica]
Length = 964
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 17/132 (12%)
Query: 24 GICIGVWKSWEKE-GLDI--KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDP 80
+ +G++ EK GL + ++I WPGN+ P+G +L I L+E P++++ P
Sbjct: 357 SMSVGLYGHQEKVLGLRMMGRNITWPGNTQVKPKGEKISRNLTIVTLKEKPFVEVLP--- 413
Query: 81 VTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYEL 140
M + +CR A A N S CC G+C+D+L + AE++ F + +
Sbjct: 414 ------MPKDGVCRPVAPAVH-----AFLCKNASQDNCCMGYCMDMLARIAEKVKFNFTI 462
Query: 141 VRVEDGKWGTQE 152
+DG +G+ E
Sbjct: 463 HLSKDGLFGSFE 474
>gi|20127397|ref|NP_569722.1| glutamate receptor ionotropic, NMDA 3B precursor [Mus musculus]
gi|51701687|sp|Q91ZU9.1|NMD3B_MOUSE RecName: Full=Glutamate receptor ionotropic, NMDA 3B; Short=GluN3B;
AltName: Full=N-methyl-D-aspartate receptor subunit
NR3B; Short=NMDAR3B; Short=NR3B; AltName: Full=NMDA
receptor 4; Short=Nr4; Flags: Precursor
gi|15865785|gb|AAL10018.1|AF396649_1 NMDA-type glutamate receptor subunit NR3B precursor [Mus musculus]
gi|18026297|gb|AAL38983.1| NMDA receptor NR4 [Mus musculus]
gi|148699672|gb|EDL31619.1| glutamate receptor, ionotropic, NMDA3B [Mus musculus]
gi|157169776|gb|AAI52739.1| Glutamate receptor, ionotropic, NMDA3B [synthetic construct]
Length = 1003
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKDIVWPGNS--HTP-PQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW+ LD + PG + P P G + L++ L E P++ D G+C
Sbjct: 388 SWQDGQLDFQ----PGAAALRVPSPSGTQARPKLRVVTLVEHPFVFTRESDE-DGQCPA- 441
Query: 89 RGVICRVAGDADMDKIDVAM-AHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C G D ++D A N S +CC G+CIDLL + AE+L F +EL V
Sbjct: 442 -GQLCLDPGTNDSARLDALFTALENGSVPRTLRRCCYGYCIDLLERLAEDLAFDFELYIV 500
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 501 GDGKYGALRD 510
>gi|17529721|gb|AAL40418.1|AF373861_1 N-methyl-D-aspartate receptor 3B [Mus musculus]
Length = 541
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKDIVWPGNS--HTP-PQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW+ LD + PG + P P G + L++ L E P++ D G+C
Sbjct: 29 SWQDGQLDFQ----PGAAALRVPSPSGTQARPKLRVVTLVEHPFVFTRESDE-DGQCPA- 82
Query: 89 RGVICRVAGDADMDKIDVAM-AHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C G D ++D A N S +CC G+CIDLL + AE+L F +EL V
Sbjct: 83 -GQLCLDPGTNDSARLDALFTALENGSVPRTLRRCCYGYCIDLLERLAEDLAFDFELYIV 141
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 142 GDGKYGALRD 151
>gi|310703673|ref|NP_612555.1| glutamate [NMDA] receptor subunit 3A isoform 1 precursor [Rattus
norvegicus]
gi|51701631|sp|Q9R1M7.1|NMD3A_RAT RecName: Full=Glutamate receptor ionotropic, NMDA 3A; Short=GluN3A;
AltName: Full=Glutamate receptor chi-1; AltName:
Full=N-methyl-D-aspartate receptor; AltName:
Full=N-methyl-D-aspartate receptor subtype 3A;
Short=NMDAR3A; Short=NR3A; AltName: Full=NMDAR-L;
AltName: Full=NMDAR-L1; Flags: Precursor
gi|5305435|gb|AAD41650.1|AF073379_1 N-methyl-D-aspartate receptor splice variant NR3A-2 [Rattus
norvegicus]
gi|149020183|gb|EDL78172.1| rCG60343, isoform CRA_b [Rattus norvegicus]
Length = 1135
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGGRIVMDSGIWPEQAQRHKTHFQHPNKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDADM-DKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ M D++ ++ N++ F +CC G+CIDLL + AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSMLDRLFSSLHSSNDTVPIKFKKCCYGYCIDLLEQLAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|310703671|ref|NP_001185512.1| glutamate [NMDA] receptor subunit 3A isoform 2 precursor [Rattus
norvegicus]
gi|1050330|gb|AAA99501.1| ionotropic glutamate receptor [Rattus norvegicus]
gi|2160125|gb|AAB58957.1| NMDAR-L [Rattus norvegicus]
gi|149020182|gb|EDL78171.1| rCG60343, isoform CRA_a [Rattus norvegicus]
Length = 1115
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGGRIVMDSGIWPEQAQRHKTHFQHPNKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDADM-DKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ M D++ ++ N++ F +CC G+CIDLL + AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSMLDRLFSSLHSSNDTVPIKFKKCCYGYCIDLLEQLAEDMNFDFDLYIVG 601
Query: 145 DGKWGT 150
DGK+G
Sbjct: 602 DGKYGA 607
>gi|441630498|ref|XP_004093282.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-4, partial [Nomascus leucogenys]
Length = 1073
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + +EE P++ + PP P+ + ++ RG
Sbjct: 371 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVFTMEERPFVIVEPPHPIAWE-SLRRGS 428
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
+ + +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 429 ----PNSPSLVTVRSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 484
Query: 152 ED 153
D
Sbjct: 485 ID 486
>gi|402903508|ref|XP_003914607.1| PREDICTED: glutamate [NMDA] receptor subunit 3B [Papio anubis]
Length = 1042
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQ---GVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW LD++ PG + P G + L++ L E P++ PD G+C
Sbjct: 388 SWRDGQLDLE----PGGAAARPPPLLGAQARARLRVVTLVEHPFVFARDPDE-DGQCPA- 441
Query: 89 RGVIC---RVAGDADMDKIDVAMAHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C A +D + A+A+ + + +CC G+CIDLL + AE+ F +EL V
Sbjct: 442 -GQLCLDPSTNNSATLDALFAALANGSVPRALRKCCYGYCIDLLERLAEDTPFDFELYIV 500
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 501 GDGKYGALRD 510
>gi|403308171|ref|XP_003944545.1| PREDICTED: glutamate [NMDA] receptor subunit 3B [Saimiri
boliviensis boliviensis]
Length = 929
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKDIVWPGNSHT---PPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW LD++ PG + PP G + L++ L E P++ PD G+C
Sbjct: 281 SWRDGRLDLE----PGGAVARPPPPPGTQARPKLRVVTLVEHPFVFARDPDE-DGQCPA- 334
Query: 89 RGVICRVAGDAD---MDKIDVAMAHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C G D +D + A+A+ + + +CC G+CIDLL + AE+ F ++L V
Sbjct: 335 -GQLCLDPGTNDSATLDALFAALANGSVPRAPRKCCYGYCIDLLEQLAEDTPFDFQLYIV 393
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 394 GDGKYGALRD 403
>gi|307214882|gb|EFN89750.1| Glutamate [NMDA] receptor subunit zeta-1 [Harpegnathos saltator]
Length = 1001
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADM 101
I+WPG +T P+G HLK+ +EE P++ + KC+ ++C
Sbjct: 440 SIIWPGRLNTKPEGFMIPTHLKVLTIEEKPFVYVRELAEGETKCSPEE-IVCP------- 491
Query: 102 DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
+H ++ CC G+C+DLL + ++ + FTY L DG++G+
Sbjct: 492 ---HFNTTNHEDTRMFCCRGYCMDLLKELSKTINFTYSLALSPDGQFGS 537
>gi|344272103|ref|XP_003407875.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
3A-like [Loxodonta africana]
Length = 1107
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW++ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQRGKIVMDYGIWPEQAKRHKTHLQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDA-DMDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLNPMTNDSFVLDSLFSSLHSSNDTVPTRFKKCCYGYCIDLLEKLAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|325197116|ref|NP_001191411.1| NMDA-type glutamate receptor precursor [Aplysia californica]
gi|33243901|gb|AAO62106.1| NMDA-like glutamate receptor protein [Aplysia californica]
Length = 964
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 17/132 (12%)
Query: 24 GICIGVWKSWEKE-GLDI--KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDP 80
+ +G++ EK GL + ++I WPGN+ P+G +L I L+E P++++ P
Sbjct: 357 SMSVGLYGHQEKVLGLRMMGRNITWPGNTQEKPKGEKISRNLTIVTLKEKPFVEVLP--- 413
Query: 81 VTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYEL 140
M + +CR A A N S CC G+C+D+L + AE++ F + +
Sbjct: 414 ------MPKDGVCRPVAPAVH-----AFLCKNASQDNCCMGYCMDMLARIAEKVKFNFTI 462
Query: 141 VRVEDGKWGTQE 152
+DG +G+ E
Sbjct: 463 HLSKDGLFGSFE 474
>gi|119579363|gb|EAW58959.1| glutamate receptor, ionotropic, N-methyl-D-aspartate 3A, isoform
CRA_b [Homo sapiens]
Length = 852
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 332 SWQGRKIVMDYGIWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 390
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 391 LCLDPMTNDSSTLDSLFSSLHSSNDTVPIKFKKCCYGYCIDLLEKIAEDMNFDFDLYIVG 450
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 451 DGKYGAWKN 459
>gi|390458205|ref|XP_002806549.2| PREDICTED: glutamate [NMDA] receptor subunit 3A [Callithrix
jacchus]
Length = 1115
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGGKIVMDYGIWPEQAQRHKTYFQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGD-ADMDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D A +D++ ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLDPMTNDSATLDRLFSSLHSSNDTVPIQFRKCCYGYCIDLLEKIAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|296232393|ref|XP_002761573.1| PREDICTED: glutamate [NMDA] receptor subunit 3B-like, partial
[Callithrix jacchus]
Length = 792
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 52 PPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDAD---MDKIDVAM 108
PP G + L++ L E P++ PD G+C G +C G D +D + A+
Sbjct: 277 PPPGTQARPKLRVVTLVEHPFVFARDPDE-DGQCPA--GQLCLDPGTNDSATLDALFAAL 333
Query: 109 AHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
A+ + + +CC G+CIDLL + AE+ F ++L V DGK+G D
Sbjct: 334 ANGSVPRALRKCCYGYCIDLLERLAEDTPFDFQLYIVGDGKYGALRD 380
>gi|380798247|gb|AFE70999.1| glutamate [NMDA] receptor subunit 3A precursor, partial [Macaca
mulatta]
gi|380798249|gb|AFE71000.1| glutamate [NMDA] receptor subunit 3A precursor, partial [Macaca
mulatta]
Length = 972
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 340 SWQGGKIVMDYGIWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 398
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + DA +D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 399 LCLDPMTNDASTLDSLFSSLHSSNDTVPIKFKKCCYGYCIDLLEKIAEDMNFDFDLYIVG 458
Query: 145 DGKWG 149
DGK+G
Sbjct: 459 DGKYG 463
>gi|338720368|ref|XP_001915691.2| PREDICTED: glutamate [NMDA] receptor subunit 3A [Equus caballus]
Length = 1116
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 484 SWQGGKIVMDYGIWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTRKVDD-EGLCPAGQ 542
Query: 90 GVICRVAGDADM-DKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ M D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 543 LCLDPMTNDSSMLDSLFSSLHSSNDTVPLKFKKCCYGYCIDLLEKLAEDMNFDFDLYIVG 602
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 603 DGKYGAWKN 611
>gi|242006424|ref|XP_002424050.1| N-methyl-D-aspartate receptor, putative [Pediculus humanus
corporis]
gi|212507356|gb|EEB11312.1| N-methyl-D-aspartate receptor, putative [Pediculus humanus
corporis]
Length = 940
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 16/115 (13%)
Query: 38 LDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAG 97
+D I+WPG P+G HLK+ +EE P++ + KC
Sbjct: 394 IDESAIIWPGLQKVKPEGFMIPTHLKVLTIEEKPFVYVRTIKEPEDKC------------ 441
Query: 98 DADMDKIDVAMAHHNESFYQ--CCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
D ++I + E YQ CC GFC+DLL + ++ + FTY L DG++G+
Sbjct: 442 --DKNEIPCPFFNATEDDYQLRCCRGFCMDLLMELSKIVNFTYSLALSPDGQFGS 494
>gi|432870076|ref|XP_004071795.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1-like
[Oryzias latipes]
Length = 1532
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 62/134 (46%), Gaps = 16/134 (11%)
Query: 25 ICIGVWKSWEKEG------LDIKDIVWPG-NSHTPPQGVPEKFHLKITFLEEAPYIQMSP 77
I + + WEK G L +K VWP NS + + HL I LEE P++ +
Sbjct: 377 IVLNKEREWEKMGKLDNGSLTVKYPVWPRFNSFGDAE--LDDNHLSIVTLEEKPFVIVED 434
Query: 78 PDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFT 137
+ +TG C M V CR D +CC GFCID+L K A+ + FT
Sbjct: 435 VERLTGTC-MRNSVPCR------KHIKDNTTEAGGTYIKKCCKGFCIDILKKIAKYVKFT 487
Query: 138 YELVRVEDGKWGTQ 151
Y+L V +GK G +
Sbjct: 488 YDLYLVTNGKHGKK 501
>gi|126335864|ref|XP_001374634.1| PREDICTED: glutamate [NMDA] receptor subunit 3A [Monodelphis
domestica]
Length = 1116
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 24/137 (17%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYI--------QMSPP--- 78
SW+ + + +WP H P + HL++ L E P++ + P
Sbjct: 486 SWQGGKIVMDYGIWPEQAQRHRTNFQHPARLHLRVVTLIEHPFVFTRQVDDDGLCPAGQL 545
Query: 79 --DPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGF 136
DP+T ++ G+ + GD D I + +CC G+CIDLL K AE+L F
Sbjct: 546 CLDPLTNNSSILDGLFESLQGDNDTVPIK---------YKKCCYGYCIDLLEKLAEDLNF 596
Query: 137 TYELVRVEDGKWGTQED 153
++L V DGK+G ++
Sbjct: 597 DFDLYIVGDGKYGAWKN 613
>gi|410902177|ref|XP_003964571.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1-like
[Takifugu rubripes]
Length = 1533
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 62/134 (46%), Gaps = 16/134 (11%)
Query: 25 ICIGVWKSWEKEG------LDIKDIVWPG-NSHTPPQGVPEKFHLKITFLEEAPYIQMSP 77
I + + WEK G L +K VWP NS + + HL I LEE P++ +
Sbjct: 384 IVLNKEREWEKMGKLDNGSLTVKYPVWPRFNSFGDAE--LDDNHLSIVTLEEKPFVIVED 441
Query: 78 PDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFT 137
+ +TG C M V CR D +CC GFCID+L K A+ + FT
Sbjct: 442 VERLTGTC-MRNSVPCR------KHIKDNTTEAGGTYIKKCCKGFCIDILKKIAKYVKFT 494
Query: 138 YELVRVEDGKWGTQ 151
Y+L V +GK G +
Sbjct: 495 YDLYLVTNGKHGKK 508
>gi|33243903|gb|AAO46102.1| NMDA-like receptor splice form [Aplysia californica]
Length = 882
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 17/132 (12%)
Query: 24 GICIGVWKSWEKE-GLDI--KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDP 80
+ +G++ EK GL + ++I WPGN+ P+G +L I L+E P++++ P
Sbjct: 357 SMSVGLYGHQEKVLGLRMMGRNITWPGNTQEKPKGEKISRNLTIVTLKEKPFVEVLP--- 413
Query: 81 VTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYEL 140
M + +CR A A N S CC G+C+D+L + AE++ F + +
Sbjct: 414 ------MPKDGVCRPVAPAVH-----AFLCKNASQDNCCMGYCMDMLARIAEKVKFNFTI 462
Query: 141 VRVEDGKWGTQE 152
+DG +G+ E
Sbjct: 463 HLSKDGLFGSFE 474
>gi|348535019|ref|XP_003454999.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-1 [Oreochromis
niloticus]
Length = 1533
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 62/134 (46%), Gaps = 16/134 (11%)
Query: 25 ICIGVWKSWEKEG------LDIKDIVWPG-NSHTPPQGVPEKFHLKITFLEEAPYIQMSP 77
I + + WEK G L +K VWP NS + + HL I LEE P++ +
Sbjct: 387 IVLNKEREWEKMGKLDNRSLTLKYPVWPRFNSFGDAE--LDDNHLSIVTLEEKPFVIVED 444
Query: 78 PDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFT 137
+ +TG C M V CR D +CC GFCID+L K A+ + FT
Sbjct: 445 VERLTGTC-MRNSVPCR------KHIKDNTTEAGGTYIKKCCKGFCIDILKKIAKYVKFT 497
Query: 138 YELVRVEDGKWGTQ 151
Y+L V +GK G +
Sbjct: 498 YDLYLVTNGKHGKK 511
>gi|20372905|emb|CAC95229.2| N-methyl D-aspartate subunit 3A [Homo sapiens]
gi|124376614|gb|AAI32869.1| Glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Homo
sapiens]
gi|124376916|gb|AAI32867.1| Glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Homo
sapiens]
Length = 1115
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGRKIVMDYGIWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSTLDSLFSSLHSSNDTVPIKFKKCCYGYCIDLLEKIAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|432101141|gb|ELK29425.1| Glutamate [NMDA] receptor subunit 3B [Myotis davidii]
Length = 886
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQ---GVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW+ L+++ PG + P G + L++ L E P++ PD G+C
Sbjct: 254 SWQDGRLELE----PGGAAVQPPSPLGAQVRPRLRVVTLVEHPFVFAREPDE-DGQCPA- 307
Query: 89 RGVICRVAGDAD---MDKIDVAMAHHNES--FYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C G D +D + A+A+ + S +CC G+CIDLL + AE+ F +EL V
Sbjct: 308 -GQLCLDPGTNDSATLDALFAALANGSVSRALRKCCYGYCIDLLERLAEDTPFDFELYIV 366
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 367 GDGKYGALRD 376
>gi|426219767|ref|XP_004004089.1| PREDICTED: glutamate [NMDA] receptor subunit 3A [Ovis aries]
Length = 1115
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW++ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQRGKIVMDYGIWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDADM-DKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ M D + ++ N++ +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSMLDSLFSSLHSSNDTVPIKLKKCCYGYCIDLLEKLAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|402896806|ref|XP_003911476.1| PREDICTED: glutamate [NMDA] receptor subunit 3A [Papio anubis]
Length = 1115
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGGKIVMDYGIWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + DA +D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLDPMTNDASTLDSLFSSLHSSNDTVPTKFKKCCYGYCIDLLEKIAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|119579362|gb|EAW58958.1| glutamate receptor, ionotropic, N-methyl-D-aspartate 3A, isoform
CRA_a [Homo sapiens]
Length = 1115
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGRKIVMDYGIWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSTLDSLFSSLHSSNDTVPIKFKKCCYGYCIDLLEKIAEDMNFDFDLYIVG 601
Query: 145 DGKWGT 150
DGK+G
Sbjct: 602 DGKYGA 607
>gi|327263741|ref|XP_003216676.1| PREDICTED: glutamate [NMDA] receptor subunit 3A-like [Anolis
carolinensis]
Length = 1092
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW++ + + +WP H P + HL++ L E P++ D G C +
Sbjct: 457 SWQEGKIIMDYGIWPEQAQRHKNHNQHPTRLHLRVVTLIEHPFVFTRAVDD-EGLCPAGQ 515
Query: 90 GVICRVAGD-ADMDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D A +D + + N++ F QCC G+CIDLL K AE++ F ++L V
Sbjct: 516 LCLDPLTNDSAVLDTLFENLQGGNDTVPTKFKQCCYGYCIDLLEKLAEDMNFDFDLYIVG 575
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 576 DGKYGALKN 584
>gi|297270477|ref|XP_001107918.2| PREDICTED: glutamate [NMDA] receptor subunit 3A-like [Macaca
mulatta]
gi|355753152|gb|EHH57198.1| N-methyl-D-aspartate receptor subtype 3A [Macaca fascicularis]
Length = 1115
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGGKIVMDYGIWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + DA +D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLDPMTNDASTLDSLFSSLHSSNDTVPIKFKKCCYGYCIDLLEKIAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|344245486|gb|EGW01590.1| Glutamate [NMDA] receptor subunit 3A [Cricetulus griseus]
Length = 759
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 366 SWQGGRIVMDSGIWPEQAQRHKTHYPHPHKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 424
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL + AE++ F ++L V
Sbjct: 425 LCLDPMTNDSSILDSLFNSLHSSNDTVPIQFKKCCYGYCIDLLEQLAEDMNFDFDLYIVG 484
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 485 DGKYGAWKN 493
>gi|345308236|ref|XP_001511703.2| PREDICTED: glutamate [NMDA] receptor subunit 3A [Ornithorhynchus
anatinus]
Length = 1208
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYI--------QMSPP--- 78
SW+ + + +WP H P + HL++ L E P++ + P
Sbjct: 578 SWQGGKIIMDYGIWPEQAQRHKSHLQHPSRLHLRVVTLIEHPFVFTREVDDDGLCPAGQL 637
Query: 79 --DPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGF 136
DP+T ++ G+ + G+ D I+ F +CC G+CIDLL K AE++ F
Sbjct: 638 CLDPLTNDSSVLDGLFESLQGNNDTVPIE---------FKKCCYGYCIDLLEKLAEDMNF 688
Query: 137 TYELVRVEDGKWGT 150
++L V DGK+G
Sbjct: 689 DFDLYIVGDGKYGA 702
>gi|449491882|ref|XP_002193904.2| PREDICTED: glutamate [NMDA] receptor subunit 3B [Taeniopygia
guttata]
Length = 691
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Query: 32 SWEKEGLDIKDIVWPG-NSHTPPQGVPE--KFHLKITFLEEAPYIQMSPPDP----VTGK 84
+W L+++++VW H P E + L++ L E P++ D G+
Sbjct: 50 TWSHGQLELEEMVWQSQRQHRSPGEAAEGARTRLRVVTLVEHPFVFTREVDEEGNCPAGQ 109
Query: 85 CNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
++ G DA +KI + +CC G+CIDLL K AE++ F +EL V
Sbjct: 110 LCLDPGTNDSAVLDALFEKIGSGNGSVPREYKKCCYGYCIDLLEKLAEDMAFDFELYIVG 169
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 170 DGKYGAWKN 178
>gi|17530177|gb|AAL40734.1|AF416558_1 N-methyl-D-aspartate receptor 3A [Homo sapiens]
Length = 1115
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGRKIVMDYGIWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSTLDSLFNSLHSSNDTVPIKFKKCCYGYCIDLLEKIAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|291382867|ref|XP_002708192.1| PREDICTED: glutamate receptor, ionotropic, N-methyl-D-aspartate 3A
[Oryctolagus cuniculus]
Length = 1115
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGGKIVMDYGIWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLNPMTNDSSILDSLFNSLHSSNDTVPIKFKKCCYGYCIDLLEKLAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|354483792|ref|XP_003504076.1| PREDICTED: glutamate [NMDA] receptor subunit 3A-like, partial
[Cricetulus griseus]
Length = 998
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 366 SWQGGRIVMDSGIWPEQAQRHKTHYPHPHKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 424
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL + AE++ F ++L V
Sbjct: 425 LCLDPMTNDSSILDSLFNSLHSSNDTVPIQFKKCCYGYCIDLLEQLAEDMNFDFDLYIVG 484
Query: 145 DGKWG 149
DGK+G
Sbjct: 485 DGKYG 489
>gi|297685011|ref|XP_002820097.1| PREDICTED: glutamate [NMDA] receptor subunit 3A [Pongo abelii]
Length = 1421
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 614 SWQGGKIVMDYGIWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTREVD-AEGLCPAGQ 672
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 673 LCLDPMTNDSSTLDSLFSSLHSSNDTVPIKFKKCCYGYCIDLLEKIAEDMNFDFDLYIVG 732
Query: 145 DGKWGT 150
DGK+G
Sbjct: 733 DGKYGA 738
>gi|444727956|gb|ELW68428.1| Glutamate [NMDA] receptor subunit 3A [Tupaia chinensis]
Length = 1124
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P + HL++ L E P++ D G C +
Sbjct: 410 SWQGGKIVMDYGIWPEQARRHKTHFQYPRRLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 468
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 469 LCLDPMTNDSSILDSLFSSLHSSNDTVPIKFKKCCYGYCIDLLEKLAEDMNFDFDLYIVG 528
Query: 145 DGKWGT 150
DGK+G
Sbjct: 529 DGKYGA 534
>gi|50511213|dbj|BAD32592.1| mKIAA1973 protein [Mus musculus]
Length = 1031
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 379 SWQGGRIVMDSGIWPEQAQRHKTHFHHPNKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 437
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL + AE++ F ++L V
Sbjct: 438 LCLDPMTNDSSILDSLFSSLHSSNDTVPIKFKKCCYGYCIDLLEQLAEDMNFDFDLYIVG 497
Query: 145 DGKWG 149
DGK+G
Sbjct: 498 DGKYG 502
>gi|157119210|ref|XP_001653302.1| glutamate receptor, ionotropic, n-methyl d-aspartate [Aedes
aegypti]
gi|108875400|gb|EAT39625.1| AAEL008587-PA [Aedes aegypti]
Length = 963
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 38 LDIKD--IVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRV 95
L I D +VWPGN+ P+G+ HLK+ +EE P++ + + + C
Sbjct: 389 LKINDTMLVWPGNTEKKPEGIMIPTHLKVLTIEEKPFVYVRKL-LDDEIDCEDDEIACPH 447
Query: 96 AGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
D ++ D CC G+CIDLL A+ + FTY+L DG++G
Sbjct: 448 FNSTDGNEKDY-----------CCKGYCIDLLKALAQRINFTYDLALSPDGQFG 490
>gi|403298709|ref|XP_003940152.1| PREDICTED: glutamate [NMDA] receptor subunit 3A [Saimiri
boliviensis boliviensis]
Length = 1115
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGGKIVMDYGLWPEQAQRHKTYFQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D++ ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSTLDRLFSSLHSSNDTVPIKFKKCCYGYCIDLLEKIAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|348550242|ref|XP_003460941.1| PREDICTED: glutamate [NMDA] receptor subunit 3B-like [Cavia
porcellus]
Length = 975
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
+W LD++ P P G + L++ L E P++ PD G+C G
Sbjct: 341 NWRDGRLDLEPGTVPARP-LPLPGTRARSKLRVVTLIEHPFVFAREPDE-DGQCPA--GH 396
Query: 92 ICRVAG---DADMDKIDVAMAHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDG 146
+C G A +D + A+A+ + + +CC G+C+DLL + AE+ F +EL V DG
Sbjct: 397 LCLDPGTNNSATLDSMFAALANGSAPRALRKCCYGYCMDLLARLAEDAPFDFELYIVGDG 456
Query: 147 KWGTQED 153
K+G D
Sbjct: 457 KYGALRD 463
>gi|332832516|ref|XP_003312259.1| PREDICTED: glutamate [NMDA] receptor subunit 3A [Pan troglodytes]
Length = 1115
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGGKIVMDYGIWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSTLDSLFSSLHSSNDTVPIKFKKCCYGYCIDLLEKIAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|256997182|dbj|BAI22784.1| glutamate receptor, ionotropic, N-methyl D-aspartate 3A [Pan
troglodytes]
Length = 1115
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGGKIVMDYGIWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSTLDSLFSSLHSSNDTVPIKFKKCCYGYCIDLLEKIAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|301782193|ref|XP_002926511.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
3A-like [Ailuropoda melanoleuca]
Length = 1102
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 44 VWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDAD- 100
+WP H P K HL++ L E P++ D G C + + + D+
Sbjct: 482 IWPEQAQRHKTHFQYPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQLCLNPMTNDSSV 540
Query: 101 MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
+D + ++ N++ F +CC G+CIDLL K AE++ F ++L V DGK+G ++
Sbjct: 541 LDSLFNSLHSSNDTVPIKFKKCCYGYCIDLLEKLAEDMNFDFDLYIVGDGKYGAWKN 597
>gi|395516080|ref|XP_003762222.1| PREDICTED: glutamate [NMDA] receptor subunit 3A [Sarcophilus
harrisii]
Length = 1213
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 24/134 (17%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYI--------QMSPP--- 78
SW+ + + +WP H P + HL++ L E P++ + P
Sbjct: 583 SWQGGKIVMDYGIWPEQAQRHRNNFQHPARLHLRVVTLIEHPFVFTRQVDDDGLCPAGQL 642
Query: 79 --DPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGF 136
DP+T ++ G+ + GD D + + +CC G+CIDLL K AE+L F
Sbjct: 643 CLDPLTNNSSILDGLFDSLQGDNDTVPLK---------YKKCCYGYCIDLLEKLAEDLNF 693
Query: 137 TYELVRVEDGKWGT 150
++L V DGK+G
Sbjct: 694 DFDLYIVGDGKYGA 707
>gi|168278991|dbj|BAG11375.1| glutamate [NMDA] receptor subunit 3A precursor [synthetic
construct]
gi|189442216|gb|AAI67432.1| Glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Homo
sapiens]
Length = 1115
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGGKIVMDYGIWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSTLDSLFSSLHSSNDTVPIKFKKCCYGYCIDLLEKIAEDMNFDFDLYIVG 601
Query: 145 DGKWGT 150
DGK+G
Sbjct: 602 DGKYGA 607
>gi|444741703|ref|NP_001263284.1| glutamate [NMDA] receptor subunit 3A isoform 1 precursor [Mus
musculus]
Length = 1135
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGGRIVMDSGIWPEQAQRHKTHFHHPNKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL + AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSILDSLFSSLHSSNDTVPIKFKKCCYGYCIDLLEQLAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|223278356|ref|NP_597702.2| glutamate receptor ionotropic, NMDA 3A precursor [Homo sapiens]
gi|212276445|sp|Q8TCU5.2|NMD3A_HUMAN RecName: Full=Glutamate receptor ionotropic, NMDA 3A; Short=GluN3A;
AltName: Full=N-methyl-D-aspartate receptor subtype 3A;
Short=NMDAR3A; Short=NR3A; AltName: Full=NMDAR-L; Flags:
Precursor
Length = 1115
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGGKIVMDYGIWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSTLDSLFSSLHSSNDTVPIKFKKCCYGYCIDLLEKIAEDMNFDFDLYIVG 601
Query: 145 DGKWGT 150
DGK+G
Sbjct: 602 DGKYGA 607
>gi|18916849|dbj|BAB85559.1| KIAA1973 protein [Homo sapiens]
Length = 1176
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 544 SWQGGKIVMDYGIWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 602
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 603 LCLDPMTNDSSTLDSLFSSLHSSNDTVPIKFKKCCYGYCIDLLEKIAEDMNFDFDLYIVG 662
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 663 DGKYGAWKN 671
>gi|148670358|gb|EDL02305.1| mCG120729, isoform CRA_b [Mus musculus]
Length = 1135
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGGRIVMDSGIWPEQAQRHKTHFHHPNKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL + AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSILDSLFSSLHSSNDTVPIKFKKCCYGYCIDLLEQLAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|166158134|ref|NP_001028523.1| glutamate [NMDA] receptor subunit 3A isoform 2 precursor [Mus
musculus]
Length = 1115
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGGRIVMDSGIWPEQAQRHKTHFHHPNKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL + AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSILDSLFSSLHSSNDTVPIKFKKCCYGYCIDLLEQLAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|148670357|gb|EDL02304.1| mCG120729, isoform CRA_a [Mus musculus]
Length = 1115
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGGRIVMDSGIWPEQAQRHKTHFHHPNKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL + AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSILDSLFSSLHSSNDTVPIKFKKCCYGYCIDLLEQLAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|395823940|ref|XP_003785233.1| PREDICTED: glutamate [NMDA] receptor subunit 3A [Otolemur
garnettii]
Length = 1115
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGGKIVMDYGIWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSILDSLFSSLHSGNDTVPLKFRKCCYGYCIDLLEKLAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|73971488|ref|XP_532019.2| PREDICTED: glutamate [NMDA] receptor subunit 3A isoform 1 [Canis
lupus familiaris]
Length = 1115
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 44 VWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDAD- 100
+WP H P K HL++ L E P++ D G C + + + D+
Sbjct: 495 IWPEQAQRHKTHFQYPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQLCLNPMTNDSSV 553
Query: 101 MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
+D + ++ N++ F +CC G+CIDLL K AE++ F ++L V DGK+G ++
Sbjct: 554 LDSLFNSLHSSNDTVPIKFKKCCYGYCIDLLEKLAEDMNFDFDLYIVGDGKYGAWKN 610
>gi|281341348|gb|EFB16932.1| hypothetical protein PANDA_012726 [Ailuropoda melanoleuca]
Length = 769
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 52 PPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDAD---MDKIDVAM 108
P G + L++ L E P++ PD G+C + +C G D +D + ++
Sbjct: 262 PSSGARARPKLRVVTLVEHPFVFAREPDE-DGQCPARQ--LCLAPGTNDSATLDALFASL 318
Query: 109 AHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
A+ + + +CC G+CIDLL + AE+ F +EL V DGK+G D
Sbjct: 319 ANGSVPRALRKCCYGYCIDLLERLAEDAPFDFELYIVGDGKYGALRD 365
>gi|341884303|gb|EGT40238.1| hypothetical protein CAEBREN_31280 [Caenorhabditis brenneri]
Length = 280
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 111 HNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
N + +CCSG+C+DLL K A ++GFTY L +V D KWG + +
Sbjct: 6 RNRTLLKCCSGYCVDLLNKLANDIGFTYTLYKVRDEKWGLKTE 48
>gi|195497364|ref|XP_002096067.1| GE25274 [Drosophila yakuba]
gi|223635342|sp|B4PVB0.1|NMDA1_DROYA RecName: Full=Glutamate [NMDA] receptor subunit 1; Flags: Precursor
gi|194182168|gb|EDW95779.1| GE25274 [Drosophila yakuba]
Length = 997
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADM 101
+I+WPG P+G+ HLK+ +EE P++ + +C + C + ++D
Sbjct: 400 EIIWPGKQRRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFRCEPDERP-CPLFNNSD- 457
Query: 102 DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
A NE CC G+CIDLL + ++ + FTY+L DG++G
Sbjct: 458 -------ATANEF---CCRGYCIDLLIELSKRINFTYDLALSPDGQFG 495
>gi|194898763|ref|XP_001978937.1| GG10981 [Drosophila erecta]
gi|223635308|sp|B3P2E5.1|NMDA1_DROER RecName: Full=Glutamate [NMDA] receptor subunit 1; Flags: Precursor
gi|190650640|gb|EDV47895.1| GG10981 [Drosophila erecta]
Length = 997
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADM 101
+I+WPG P+G+ HLK+ +EE P++ + +C + C + ++D
Sbjct: 400 EIIWPGKQRRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFRCEPDERP-CPLFNNSD- 457
Query: 102 DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
A NE CC G+CIDLL + ++ + FTY+L DG++G
Sbjct: 458 -------ATANEF---CCRGYCIDLLIELSKRINFTYDLALSPDGQFG 495
>gi|410978762|ref|XP_003995757.1| PREDICTED: glutamate [NMDA] receptor subunit 3A [Felis catus]
Length = 1011
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 44 VWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDAD- 100
+WP H P K HL++ L E P++ D G C + + + D+
Sbjct: 390 IWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQLCLNPLTNDSSV 448
Query: 101 MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
+D + ++ N++ F +CC G+CIDLL K AE++ F ++L V DGK+G ++
Sbjct: 449 LDGLFSSLHSSNDTVPIKFKKCCYGYCIDLLEKLAEDMNFDFDLYIVGDGKYGAWKN 505
>gi|195343673|ref|XP_002038420.1| GM10627 [Drosophila sechellia]
gi|195568444|ref|XP_002102226.1| GD19612 [Drosophila simulans]
gi|223635338|sp|B4I414.1|NMDA1_DROSE RecName: Full=Glutamate [NMDA] receptor subunit 1; Flags: Precursor
gi|223635339|sp|B4QWW7.1|NMDA1_DROSI RecName: Full=Glutamate [NMDA] receptor subunit 1; Flags: Precursor
gi|194133441|gb|EDW54957.1| GM10627 [Drosophila sechellia]
gi|194198153|gb|EDX11729.1| GD19612 [Drosophila simulans]
Length = 997
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADM 101
+I+WPG P+G+ HLK+ +EE P++ + +C + C + ++D
Sbjct: 400 EIIWPGKQRRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFRCEPDERP-CPLFNNSD- 457
Query: 102 DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
A NE CC G+CIDLL + ++ + FTY+L DG++G
Sbjct: 458 -------ATANEF---CCRGYCIDLLIELSKRINFTYDLALSPDGQFG 495
>gi|426362555|ref|XP_004048425.1| PREDICTED: glutamate [NMDA] receptor subunit 3A [Gorilla gorilla
gorilla]
Length = 1115
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGGKIVMDYGIWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL K AE++ F ++L +
Sbjct: 542 LCLDPMTNDSSTLDSLFSSLHSSNDTVPIKFKKCCYGYCIDLLEKIAEDMNFDFDLYIIG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|449273015|gb|EMC82644.1| Glutamate [NMDA] receptor subunit 3B, partial [Columba livia]
Length = 726
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 25 ICIGVWKSWEKEGLDIKDIVWPGNSH--TPPQGVP-EKFHLKITFLEEAPYIQMSPPDPV 81
+ +G W+ E L +++ W +P +G + L++ L E P++ D
Sbjct: 239 VTVGTWRHGE---LQLEEGAWQSQRQHESPSEGAGGARVRLRVVTLVEHPFVFTREADE- 294
Query: 82 TGKCNMNRGVICRVAG-------DADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEEL 134
G C G +C G D+ +++ A ++ +CC G+CIDLL K AE++
Sbjct: 295 DGTCPA--GQLCLDPGTNDSAVLDSLFEELSAANGSVPRAYKKCCYGYCIDLLEKLAEDM 352
Query: 135 GFTYELVRVEDGKWGTQED 153
F +EL V DGK+G ++
Sbjct: 353 AFDFELYIVGDGKYGAWKN 371
>gi|194741710|ref|XP_001953330.1| GF17704 [Drosophila ananassae]
gi|223635307|sp|B3LZ39.1|NMDA1_DROAN RecName: Full=Glutamate [NMDA] receptor subunit 1; Flags: Precursor
gi|190626389|gb|EDV41913.1| GF17704 [Drosophila ananassae]
Length = 994
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN-RGVICRVAGDAD 100
+I+WPG P+G+ HLK+ +EE P++ + +C + R A DA
Sbjct: 397 EIIWPGKQRRKPEGIMIPTHLKVLTIEEKPFVYVRRMGDDEFRCEPDERPCPLFNASDAT 456
Query: 101 MDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
++ CC G+CIDLL + ++ + FTY+L DG++G
Sbjct: 457 ANEF-------------CCRGYCIDLLIELSKRINFTYDLALSPDGQFG 492
>gi|363743790|ref|XP_426726.3| PREDICTED: glutamate [NMDA] receptor subunit 3B-like, partial
[Gallus gallus]
Length = 971
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 17/134 (12%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPE-----KFHLKITFLEEAPYIQMSPPDPVTGKCN 86
+W+ L +++ W SH +G PE + L++ L E P++ D G C
Sbjct: 307 TWQHGKLQLEEGAW--QSHLQRKGPPEGNGGARARLRVVTLVEHPFVFTREVDE-DGSCP 363
Query: 87 MNRGVICRVAGDAD---MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYE 139
G +C G D +D + ++ N S + +CC G+CIDLL + AE++ F +E
Sbjct: 364 A--GQLCLDPGTNDSAVLDALFEELSAENGSVPREYKKCCYGYCIDLLERLAEDVPFDFE 421
Query: 140 LVRVEDGKWGTQED 153
L V DGK+G ++
Sbjct: 422 LYIVGDGKYGAWKN 435
>gi|91090776|ref|XP_969654.1| PREDICTED: similar to NMDA-type glutamate receptor 1 [Tribolium
castaneum]
gi|270013267|gb|EFA09715.1| hypothetical protein TcasGA2_TC011848 [Tribolium castaneum]
Length = 946
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 28/122 (22%)
Query: 37 GLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMS----PPDPVTGKCNMNRGVI 92
+D +I+WPG H P+G HLK+ +EE P++ + P D T +
Sbjct: 383 AVDENNILWPGRQHVKPEGFMIPTHLKVLTIEEKPFVYVRKLVEPQDVCTAE-------- 434
Query: 93 CRVAGDADMDKIDVAMAHHNESF----YQCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
++ H N + CC G+C+DLL + ++++ FTY L DG++
Sbjct: 435 ------------EIPCPHFNATQDLAGSYCCKGYCMDLLKELSKKINFTYSLALSPDGQF 482
Query: 149 GT 150
G
Sbjct: 483 GN 484
>gi|348513913|ref|XP_003444485.1| PREDICTED: glutamate [NMDA] receptor subunit 3A-like [Oreochromis
niloticus]
Length = 1269
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 25/133 (18%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQG---VPEKFHLKITFLEEAPYI--------QMSPP--- 78
W + + + WP + + G P + H+++ L E P++ + P
Sbjct: 565 WRRGRILMDPAAWPNHPGSGGGGDWRRPPRLHMRVVTLVEHPFVFTREVDSDGLCPAGQL 624
Query: 79 --DPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGF 136
DP+T + ++ G+ + G D+ +CC G+CIDLL K E++GF
Sbjct: 625 CLDPLTNESSVLEGLFQNLRGTNGSVPTDLK---------KCCYGYCIDLLEKLGEDMGF 675
Query: 137 TYELVRVEDGKWG 149
T++L V DGK+G
Sbjct: 676 TFDLYIVGDGKYG 688
>gi|24644257|ref|NP_730940.1| NMDA receptor 1 [Drosophila melanogaster]
gi|74873401|sp|Q24418.1|NMDA1_DROME RecName: Full=Glutamate [NMDA] receptor subunit 1; Short=DNMDAR-I;
Short=dNR1; Flags: Precursor
gi|312198|emb|CAA50675.1| DNMDAR-I [Drosophila melanogaster]
gi|7296737|gb|AAF52016.1| NMDA receptor 1 [Drosophila melanogaster]
gi|17944310|gb|AAL48048.1| RE12105p [Drosophila melanogaster]
Length = 997
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADM 101
+I+WPG P+G+ HL++ +EE P++ + +C + C + ++D
Sbjct: 400 EIIWPGKQRRKPEGIMIPTHLRLLTIEEKPFVYVRRMGDDEFRCEPDERP-CPLFNNSD- 457
Query: 102 DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
A NE CC G+CIDLL + ++ + FTY+L DG++G
Sbjct: 458 -------ATANEF---CCRGYCIDLLIELSKRINFTYDLALSPDGQFG 495
>gi|125776680|ref|XP_001359355.1| GA15505 [Drosophila pseudoobscura pseudoobscura]
gi|121990177|sp|Q296F7.1|NMDA1_DROPS RecName: Full=Glutamate [NMDA] receptor subunit 1; Flags: Precursor
gi|54639098|gb|EAL28500.1| GA15505 [Drosophila pseudoobscura pseudoobscura]
Length = 1004
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 35 KEGLDIKD--IVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
K ++I D I+WPG + P+G+ HLK+ +EE P++ + +C
Sbjct: 403 KMRMNINDSEIIWPGKQNRKPEGIMIPTHLKVLTIEEKPFVYVRRMGDDEFRC------- 455
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
+ D + A + + CC G+CIDLL + ++ + FTY+L DG++G
Sbjct: 456 -----EPDERPCPLFNATDSTANEYCCRGYCIDLLIELSKRINFTYDLALSPDGQFG 507
>gi|195152487|ref|XP_002017168.1| GL22160 [Drosophila persimilis]
gi|223635337|sp|B4GF83.1|NMDA1_DROPE RecName: Full=Glutamate [NMDA] receptor subunit 1; Flags: Precursor
gi|194112225|gb|EDW34268.1| GL22160 [Drosophila persimilis]
Length = 1004
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 35 KEGLDIKD--IVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
K ++I D I+WPG + P+G+ HLK+ +EE P++ + +C
Sbjct: 403 KMRMNINDSEIIWPGKQNRKPEGIMIPTHLKVLTIEEKPFVYVRRMGDDEFRC------- 455
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
+ D + A + + CC G+CIDLL + ++ + FTY+L DG++G
Sbjct: 456 -----EPDERPCPLFNATDSTANEYCCRGYCIDLLIELSKRINFTYDLALSPDGQFG 507
>gi|260824367|ref|XP_002607139.1| hypothetical protein BRAFLDRAFT_68067 [Branchiostoma floridae]
gi|229292485|gb|EEN63149.1| hypothetical protein BRAFLDRAFT_68067 [Branchiostoma floridae]
Length = 1020
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 17/107 (15%)
Query: 43 IVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMD 102
I GN TP +P H I ++E P++ +S D C M V C+ A
Sbjct: 448 ITNQGNLLTP---LPTARHFNIVTIKEDPFVFVSEKDDAI--C-MGNAVECKQA------ 495
Query: 103 KIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
ID H +CCSGFC++LL + A++L FTYE+ VEDGK+G
Sbjct: 496 -IDGPPGH----VIRCCSGFCMELLLQLAKDLHFTYEVYLVEDGKFG 537
>gi|431909843|gb|ELK12945.1| Glutamate [NMDA] receptor subunit 3A [Pteropus alecto]
Length = 1188
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGGKVVVDYGIWPEQAQRHKTHFQHPRKLHLRVVTLIEHPFVFTREVDE-EGLCPAGQ 541
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSILDSLFSSLHSSNDTVPIKLKKCCYGYCIDLLEKLAEDMNFDFDLYIVG 601
Query: 145 DGKWGT 150
DGK+G
Sbjct: 602 DGKYGA 607
>gi|350402421|ref|XP_003486477.1| PREDICTED: glutamate [NMDA] receptor subunit 1-like [Bombus
impatiens]
Length = 954
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADM 101
+I WPG T P+G HLK+ +EE P++ + + +G+ + + C
Sbjct: 395 NITWPGRLQTKPEGFMIPTHLKVLTIEEKPFVYVR--EITSGEPCLPEEIPCP------- 445
Query: 102 DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
+ H + CC G+C+DLL + ++ + FTY L DG++G+
Sbjct: 446 ---HFNVTEHETTKTYCCKGYCMDLLKELSKTINFTYSLALSPDGQFGS 491
>gi|348570340|ref|XP_003470955.1| PREDICTED: glutamate [NMDA] receptor subunit 3A-like isoform 2
[Cavia porcellus]
Length = 1135
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H K HL++ L E P++ D G C +
Sbjct: 483 SWQGGRIVMDYGIWPEQAQRHKAHFQHSSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSVLDSLFTSLHSSNDTVPIKFKKCCYGYCIDLLEKLAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|348570338|ref|XP_003470954.1| PREDICTED: glutamate [NMDA] receptor subunit 3A-like isoform 1
[Cavia porcellus]
Length = 1114
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H K HL++ L E P++ D G C +
Sbjct: 483 SWQGGRIVMDYGIWPEQAQRHKAHFQHSSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSVLDSLFTSLHSSNDTVPIKFKKCCYGYCIDLLEKLAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|195433367|ref|XP_002064686.1| GK23704 [Drosophila willistoni]
gi|223635341|sp|B4MU83.1|NMDA1_DROWI RecName: Full=Glutamate [NMDA] receptor subunit 1; Flags: Precursor
gi|194160771|gb|EDW75672.1| GK23704 [Drosophila willistoni]
Length = 982
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADM 101
+I+W G P+G+ HLK+ +EE P++ + C N C + D
Sbjct: 389 EIIWAGKQKRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFHCEPNERP-CPLFNTTD- 446
Query: 102 DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
A NE CCSG+CIDLL + A+ + FTY+L DG++G
Sbjct: 447 -------ATANEF---CCSGYCIDLLIELAKRINFTYDLALSPDGQFG 484
>gi|397499988|ref|XP_003820711.1| PREDICTED: glutamate [NMDA] receptor subunit 3A, partial [Pan
paniscus]
Length = 1021
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 57 PEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDAD-MDKIDVAMAHHNES- 114
P K HL++ L E P++ D G C + + + D+ +D + ++ N++
Sbjct: 416 PSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQLCLDPMTNDSSTLDSLFSSLHSSNDTV 474
Query: 115 ---FYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
F +CC G+CIDLL K AE++ F ++L V DGK+G
Sbjct: 475 PIKFKKCCYGYCIDLLEKIAEDMNFDFDLYIVGDGKYG 512
>gi|440910426|gb|ELR60224.1| Glutamate [NMDA] receptor subunit 3B, partial [Bos grunniens mutus]
Length = 1021
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 45 WPGNSHTPP-QGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDAD--- 100
W PP G E+ L++ L E P++ PD G+C G +C G D
Sbjct: 389 WGAAERPPPLPGAQERPKLRVVTLVEHPFVFARQPDE-DGRCPA--GQLCLAPGTNDSAA 445
Query: 101 --MDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
+A + +CC G+CIDLL + AE+ F +EL V DGK+G D
Sbjct: 446 LDALFAALADGSAPRALRRCCYGYCIDLLERLAEDAPFDFELYIVGDGKYGALRD 500
>gi|329299095|ref|NP_001178464.1| glutamate [NMDA] receptor subunit 3A precursor [Bos taurus]
gi|296484428|tpg|DAA26543.1| TPA: glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Bos
taurus]
Length = 1115
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW++ + + +WP H P K +L++ L E P++ D G C +
Sbjct: 483 SWQRGKIVMDYGIWPEQAQRHKTHFQHPSKLNLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDADM-DKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ M D + ++ N++ +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLDPMTNDSAMLDSLFSSLHSSNDTVPIKLKKCCYGYCIDLLEKLAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|449513899|ref|XP_002187578.2| PREDICTED: glutamate [NMDA] receptor subunit 3A [Taeniopygia
guttata]
Length = 1177
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW++ + + +WP H P + HL++ L E P++ D G C +
Sbjct: 547 SWQEGKIIMDYGIWPEQAQRHKSHMQHPTRLHLRVVTLIEHPFVFTRDVDD-EGLCPAGQ 605
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + + N++ +CC G+CIDLL K AE++ F ++L V
Sbjct: 606 LCLDPLTNDSGVLDSLFETLQGENDTVPIELKKCCYGYCIDLLEKLAEDMNFDFDLYIVG 665
Query: 145 DGKWG 149
DGK+G
Sbjct: 666 DGKYG 670
>gi|83032329|gb|ABB97044.1| NR1-2 splice variant [Lymnaea stagnalis]
Length = 879
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 24/117 (20%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDAD 100
++ WPGN H P+G +L I L+E P+ +++P P G C
Sbjct: 374 NNLTWPGNVHVKPKGEKISRNLTIVTLKEKPFAEVTPL-PKDGHCR-------------- 418
Query: 101 MDKIDVAMAHH-----NESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
VA A H N + CC G+C+D+L K +E++ F + + +DG +G+ E
Sbjct: 419 ----PVAPAKHAFPCKNGTHDYCCMGYCMDMLAKISEDVLFNFTIHLSKDGLFGSFE 471
>gi|48237443|gb|AAT40576.1| NMDA-type glutamate receptor [Lymnaea stagnalis]
Length = 963
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 24/117 (20%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDAD 100
++ WPGN H P+G +L I L+E P+ +++P P G C
Sbjct: 374 NNLTWPGNVHVKPKGEKISRNLTIVTLKEKPFAEVTPL-PKDGHCR-------------- 418
Query: 101 MDKIDVAMAHH-----NESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
VA A H N + CC G+C+D+L K +E++ F + + +DG +G+ E
Sbjct: 419 ----PVAPAKHAFPCKNGTHDYCCMGYCMDMLAKISEDVLFNFTIHLSKDGLFGSFE 471
>gi|340711805|ref|XP_003394459.1| PREDICTED: glutamate [NMDA] receptor subunit 1-like [Bombus
terrestris]
Length = 954
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 43 IVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMD 102
I WPG T P+G HLK+ +EE P++ + + +G+ + + C D
Sbjct: 396 ITWPGRLQTKPEGFMIPTHLKVLTIEEKPFVYVR--EIASGEPCLPEEIPCPHFNVTD-- 451
Query: 103 KIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
H + CC G+C+DLL + ++ + FTY L DG++G+
Sbjct: 452 --------HETTKTYCCKGYCMDLLKELSKTINFTYSLALSPDGQFGS 491
>gi|326935330|ref|XP_003213726.1| PREDICTED: glutamate [NMDA] receptor subunit 3A-like, partial
[Meleagris gallopavo]
Length = 349
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW++ + + +WP H P + HL++ L E P++ D G C +
Sbjct: 48 SWQEGKIVMDYGIWPEQAQRHKNHMQHPTRLHLRVVTLIEHPFVFTRDVDD-EGLCPAGQ 106
Query: 90 GVICRVAGD-ADMDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D A +D + + N++ +CC G+CIDLL K AE++ F ++L V
Sbjct: 107 LCLDPLTNDSAVLDNLFETLQGGNDTVPIELKKCCYGYCIDLLEKLAEDMNFDFDLYIVG 166
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 167 DGKYGAWKN 175
>gi|440894712|gb|ELR47098.1| Glutamate [NMDA] receptor subunit 3A [Bos grunniens mutus]
Length = 1115
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW + + + +WP H P K +L++ L E P++ D G C +
Sbjct: 483 SWRRGKIVMDYGIWPEQAQRHKTHFQHPSKLNLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDADM-DKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ M D + ++ N++ +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLDPMTNDSAMLDSLFSSLHSSNDTVPIKLKKCCYGYCIDLLEKLAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|351714611|gb|EHB17530.1| Glutamate [NMDA] receptor subunit 3A [Heterocephalus glaber]
Length = 844
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + WP H K HL++ L E P++ D G C +
Sbjct: 483 SWQGGKIVMDYGTWPEQAQRHKTHFQHSSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDADM-DKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ M D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSMLDSLFNSLHSSNDTVPIKFKKCCYGYCIDLLEKLAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>gi|335282264|ref|XP_003354014.1| PREDICTED: glutamate [NMDA] receptor subunit 3B [Sus scrofa]
Length = 1031
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 62 LKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKID-----VAMAHHNESFY 116
L++ L E P++ PD G+C G +C G D +D +A +
Sbjct: 417 LRVVTLVEHPFVFAREPDE-DGQCPA--GQLCLAPGTNDSATLDALFAGLANGSVPRALR 473
Query: 117 QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
+CC G+CIDLL + AE+ F +EL V DGK+G D
Sbjct: 474 RCCYGYCIDLLERLAEDTPFDFELYIVGDGKYGALRD 510
>gi|383861232|ref|XP_003706090.1| PREDICTED: glutamate [NMDA] receptor subunit 1-like [Megachile
rotundata]
Length = 955
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 12/116 (10%)
Query: 35 KEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICR 94
K L+ +I WPG T P+G HLK+ +EE P++ + + + + ++C
Sbjct: 389 KLSLNEMNITWPGRVATKPEGFMIPTHLKVLTIEEKPFVYVR--EIADSESCLPEEILC- 445
Query: 95 VAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
+V + + CC G+C+DLL + ++ + FTY L DG++G+
Sbjct: 446 -------PHFNVTDQQSTKRY--CCKGYCMDLLKQLSKTINFTYSLALSPDGQFGS 492
>gi|363744812|ref|XP_001232182.2| PREDICTED: glutamate [NMDA] receptor subunit 3A [Gallus gallus]
Length = 1089
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW++ + + +WP H P + HL++ L E P++ D G C +
Sbjct: 459 SWQEGKIVMDYGIWPEQAQRHKNHMQHPTRLHLRVVTLIEHPFVFTRDVDD-EGLCPAGQ 517
Query: 90 GVICRVAGD-ADMDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D A +D + + N++ +CC G+CIDLL K AE++ F ++L V
Sbjct: 518 LCLDPLTNDSAVLDNLFETLQGGNDTVPIELKKCCYGYCIDLLEKLAEDMNFDFDLYIVG 577
Query: 145 DGKWGT 150
DGK+G
Sbjct: 578 DGKYGA 583
>gi|307189011|gb|EFN73528.1| Glutamate [NMDA] receptor subunit zeta-1 [Camponotus floridanus]
Length = 965
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADM 101
+I+WPG P+G HLK+ +EE P++ + KC M + C D
Sbjct: 404 NIIWPGRVKNKPEGFMIPTHLKVLTIEEKPFVYVRELVDGEIKC-MPDEIACPHFNTTDG 462
Query: 102 DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
+ + CC G+C+DLL + ++ + FTY L DG++G+
Sbjct: 463 ENTRIF----------CCKGYCMDLLKELSKTINFTYSLALSPDGQFGS 501
>gi|358340121|dbj|GAA48082.1| glutamate [NMDA] receptor subunit epsilon-2, partial [Clonorchis
sinensis]
Length = 977
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 65/173 (37%), Gaps = 53/173 (30%)
Query: 27 IGVWKSWEKEG-----LDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYI--QMSPPD 79
+G W K G L I + WPG S++PP+G P KF +++ ++E P++ Q D
Sbjct: 448 VGTWSMSNKWGKQISRLLIDGVTWPGGSNSPPKGRPSKFKVRVVTIKEKPFVIYQAVQED 507
Query: 80 PVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQ---------------------- 117
GKC+ N + C++ + D V A F
Sbjct: 508 ---GKCDGN-SLPCKLRPQSMFDTDPVIQATERTRFSSVTESPRHATGENATFDKTSSYR 563
Query: 118 --------------------CCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
CCSG +DLL + ++L F +L DG WG
Sbjct: 564 KEEGLVNHTLPFNASDYVDGCCSGLTMDLLMELMKDLNFDIDLYEAPDGLWGA 616
>gi|47211789|emb|CAF93757.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2178
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 15/128 (11%)
Query: 33 WEKEGLDIKDIVWPGNSHTPP------QGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
W + + + WP SH P + P + H+++ L E P++ D G C
Sbjct: 459 WRRGKVVMDQGAWP--SHQGPGAGGDGRAAPRR-HMRVVTLVEHPFVFTREVDG-DGLCP 514
Query: 87 MNRGVICRVAGDAD-MDKIDVAMAHHNESF----YQCCSGFCIDLLGKFAEELGFTYELV 141
+ + + ++ ++K+ ++ N S +CC G+CIDLL K AE++GFT++L
Sbjct: 515 AGQLCLDPLTNESSVLEKLFHSLGAPNASLPRDHRKCCYGYCIDLLEKLAEDMGFTFDLY 574
Query: 142 RVEDGKWG 149
V DGK+G
Sbjct: 575 IVGDGKYG 582
>gi|58585096|ref|NP_001011573.1| NMDA receptor 1 [Apis mellifera]
gi|33114005|gb|AAP94623.1| NMDA-type glutamate receptor 1 [Apis mellifera]
gi|68124060|emb|CAJ09700.1| NMDA-type glutamate receptor subunit 1, variant 1 (NR1.1) [Apis
mellifera carnica]
Length = 953
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Query: 34 EKEGLDIK--DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
EK L + +I WPG T P+G HLK+ +EE P++ + + + + +
Sbjct: 384 EKMTLSVNESNITWPGRLQTKPEGFMIPTHLKVLTIEEKPFVYVR--EIAFSESCLPEEI 441
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
+C +V ++F CC G+C+DLL + ++ + FTY L DG++G
Sbjct: 442 LC--------PHFNVTDGETTKTF--CCKGYCMDLLKELSKTINFTYSLALSPDGQFGN 490
>gi|47215036|emb|CAF95890.1| unnamed protein product [Tetraodon nigroviridis]
Length = 955
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 22/109 (20%)
Query: 58 EKFHLKITFLEEAPYI--------QMSPP-----DPVTGKCNMNRGVICRV----AGDAD 100
E L++ L E P++ M P DP T + ++ +G+ ++ + D
Sbjct: 415 EGHRLRVVTLVEHPFVFTREVDEDGMCPAGQLCLDPRTNRSDVIQGLFNQLRNPNSTAPD 474
Query: 101 MDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
D D+ E +CC G+CIDLL K AE++GFT++L V DGK+G
Sbjct: 475 WDGTDLP-----EDLRKCCYGYCIDLLEKLAEDMGFTFDLYIVGDGKYG 518
>gi|380030143|ref|XP_003698715.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
1-like [Apis florea]
Length = 957
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Query: 34 EKEGLDIK--DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
EK L + +I WPG T P+G HLK+ +EE P++ + + + + +
Sbjct: 384 EKMTLSVNESNITWPGRLQTKPEGFMIPTHLKVLTIEEKPFVYVR--EIAFSESCLPEEI 441
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
+C +V ++F CC G+C+DLL + ++ + FTY L DG++G
Sbjct: 442 LC--------PHFNVTDGETTKTF--CCKGYCMDLLKELSKTINFTYSLALSPDGQFGN 490
>gi|297477176|ref|XP_002689214.1| PREDICTED: glutamate [NMDA] receptor subunit 3B [Bos taurus]
gi|296485416|tpg|DAA27531.1| TPA: glutamate receptor, ionotropic, N-methyl-D-aspartate 3B-like
[Bos taurus]
Length = 1013
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 45 WPGNSHTPP-QGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDAD--- 100
W PP G E+ L++ L E P++ PD G+C G +C G D
Sbjct: 364 WGAAERPPPLPGAQERPKLRVVTLVEHPFVFARQPDE-DGRCPA--GQLCLAPGINDSAA 420
Query: 101 --MDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
+A + +CC G+CIDLL + AE+ F +EL V DGK+G D
Sbjct: 421 LDALFAALADGSAPRALRRCCYGYCIDLLERLAEDAPFDFELYIVGDGKYGALRD 475
>gi|194668548|ref|XP_873041.3| PREDICTED: glutamate [NMDA] receptor subunit 3B [Bos taurus]
Length = 991
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 45 WPGNSHTPP-QGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDAD--- 100
W PP G E+ L++ L E P++ PD G+C G +C G D
Sbjct: 360 WGAAERPPPLPGAQERPKLRVVTLVEHPFVFARQPDE-DGRCPA--GQLCLAPGINDSAA 416
Query: 101 --MDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
+A + +CC G+CIDLL + AE+ F +EL V DGK+G D
Sbjct: 417 LDALFAALADGSAPRALRRCCYGYCIDLLERLAEDAPFDFELYIVGDGKYGALRD 471
>gi|195927277|pdb|2RCA|B Chain B, Crystal Structure Of The Nr3b Ligand Binding Core Complex
With Glycine At 1.58 Angstrom Resolution
gi|195927278|pdb|2RCB|A Chain A, Crystal Structure Of The Nr3b Ligand Binding Core Complex
With D- Serine At 1.62 Angstrom Resolution
gi|195927279|pdb|2RCB|B Chain B, Crystal Structure Of The Nr3b Ligand Binding Core Complex
With D- Serine At 1.62 Angstrom Resolution
gi|253722574|pdb|2RCA|A Chain A, Crystal Structure Of The Nr3b Ligand Binding Core Complex
With Glycine At 1.58 Angstrom Resolution
Length = 292
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 62 LKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMA-----HHNESFY 116
L++ L E P++ D G+C G +C G D ++D A +
Sbjct: 7 LRVVTLVEHPFVFTRESDE-DGQCPA--GQLCLDPGTNDSARLDALFAALVNGSVPRTLR 63
Query: 117 QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
+CC G+CIDLL + AE+L F +EL V DGK+G D
Sbjct: 64 RCCYGYCIDLLERLAEDLAFDFELYIVGDGKYGALRD 100
>gi|743476|prf||2012328B D-MeAsp receptor:ISOTYPE=NR2A
Length = 1464
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ L + VWP + P+ HL I LEEAP++ + DP+T + + V
Sbjct: 378 WKNNTLSLSHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLT-ETGVRNTVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +C GFCID+L K + + TY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCGKGFCIDILKKLSRTVKETYDLYLVTNGKHGKK 488
>gi|33358038|pdb|1PB8|A Chain A, Crystal Structure Of The Nr1 Ligand Binding Core In
Complex With D-Serine At 1.45 Angstroms Resolution
gi|33358039|pdb|1PB9|A Chain A, Crystal Structure Of The Nr1 Ligand Binding Core In
Complex With D-Cycloserine At 1.60 Angstroms Resolution
Length = 292
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 14/101 (13%)
Query: 61 HLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNE 113
LKI + + P++ + P + T + + VIC D +
Sbjct: 5 RLKIVTIHQEPFVYVKPTMSDGTCKEEFTVNGDPVKKVICTGPNDT-------SPGSPRH 57
Query: 114 SFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
+ QCC GFCIDLL K A + FTYE+ V DGK+GTQE +
Sbjct: 58 TVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQERV 98
>gi|33358037|pdb|1PB7|A Chain A, Crystal Structure Of The Nr1 Ligand Binding Core In
Complex With Glycine At 1.35 Angstroms Resolution
gi|34811047|pdb|1PBQ|A Chain A, Crystal Structure Of The Nr1 Ligand Binding Core In
Complex With 5,7-Dichlorokynurenic Acid (Dcka) At 1.90
Angstroms Resolution
gi|34811048|pdb|1PBQ|B Chain B, Crystal Structure Of The Nr1 Ligand Binding Core In
Complex With 5,7-Dichlorokynurenic Acid (Dcka) At 1.90
Angstroms Resolution
gi|73535562|pdb|1Y1M|A Chain A, Crystal Structure Of The Nr1 Ligand Binding Core In
Complex With Cycloleucine
gi|73535563|pdb|1Y1M|B Chain B, Crystal Structure Of The Nr1 Ligand Binding Core In
Complex With Cycloleucine
gi|73535564|pdb|1Y1Z|A Chain A, Crystal Structure Of The Nr1 Ligand Binding Core In
Complex With Acbc
gi|73535565|pdb|1Y20|A Chain A, Crystal Structure Of The Nr1 Ligand-binding Core In
Complex With Acpc
gi|83753934|pdb|2A5T|A Chain A, Crystal Structure Of The Nr1NR2A LIGAND-Binding Cores
Complex
Length = 292
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 14/101 (13%)
Query: 61 HLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNE 113
LKI + + P++ + P + T + + VIC D +
Sbjct: 5 RLKIVTIHQEPFVYVKPTMSDGTCKEEFTVNGDPVKKVICTGPNDT-------SPGSPRH 57
Query: 114 SFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
+ QCC GFCIDLL K A + FTYE+ V DGK+GTQE +
Sbjct: 58 TVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQERV 98
>gi|195927270|pdb|2RC7|A Chain A, Crystal Structure Of The Nr3a Ligand Binding Core Complex
With Glycine At 1.58 Angstrom Resolution
gi|195927272|pdb|2RC8|A Chain A, Crystal Structure Of The Nr3a Ligand Binding Core Complex
With D- Serine At 1.45 Angstrom Resolution
gi|195927273|pdb|2RC8|B Chain B, Crystal Structure Of The Nr3a Ligand Binding Core Complex
With D- Serine At 1.45 Angstrom Resolution
gi|195927274|pdb|2RC9|A Chain A, Crystal Structure Of The Nr3a Ligand Binding Core Complex
With Acpc At 1.96 Angstrom Resolution
gi|195927275|pdb|2RC9|B Chain B, Crystal Structure Of The Nr3a Ligand Binding Core Complex
With Acpc At 1.96 Angstrom Resolution
gi|408489432|pdb|2RC7|B Chain B, Crystal Structure Of The Nr3a Ligand Binding Core Complex
With Glycine At 1.58 Angstrom Resolution
Length = 294
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 58 EKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADM-DKIDVAMAHHNES-- 114
K HL++ L E P++ D G C + + + D+ M D++ ++ N++
Sbjct: 3 NKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQLCLDPMTNDSSMLDRLFSSLHSSNDTVP 61
Query: 115 --FYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
F +CC G+CIDLL + AE++ F ++L V DGK+G
Sbjct: 62 IKFKKCCYGYCIDLLEQLAEDMNFDFDLYIVGDGKYGA 99
>gi|410897921|ref|XP_003962447.1| PREDICTED: glutamate [NMDA] receptor subunit 3B-like [Takifugu
rubripes]
Length = 1315
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 58 EKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNE---- 113
E L++ L E P++ D G C G +C D +K DV + N+
Sbjct: 511 EGHRLRVVTLVEHPFVFTREVDE-DGMCPA--GQLCL---DPKTNKSDVIQSLFNQLRNP 564
Query: 114 -----SFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
+CC G+CIDLL K AE++GFT++L V DGK+G
Sbjct: 565 NNLPDDLRKCCYGYCIDLLEKLAEDMGFTFDLYIVGDGKYG 605
>gi|348511073|ref|XP_003443069.1| PREDICTED: glutamate [NMDA] receptor subunit 3A-like [Oreochromis
niloticus]
Length = 910
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 79 DPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTY 138
DP T + ++ G+ ++ +++ +D E +CC G+CIDLL K AE++GFT+
Sbjct: 548 DPKTNQSSIIHGLFNQLH-NSNTTTVDWDGTELPEDLRKCCYGYCIDLLEKLAEDMGFTF 606
Query: 139 ELVRVEDGKWG 149
+L V DGK+G
Sbjct: 607 DLYIVGDGKYG 617
>gi|332025508|gb|EGI65671.1| Glutamate [NMDA] receptor subunit 1 [Acromyrmex echinatior]
Length = 962
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 17/111 (15%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAP--YIQMSPPDPVTGKCNMNRGVICRVAGDA 99
+I+WPG P+G HLK+ +EE P Y++ P + V +C + + C
Sbjct: 404 NIIWPGRLKIKPEGFMIPTHLKVLTIEEKPFVYVRELPDNEV--EC-LPEEIACP----- 455
Query: 100 DMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
+ N+ F CC G+C+DLL + ++ + FTY L DG++G+
Sbjct: 456 -----HFNLTDDNQMF--CCKGYCVDLLKELSKTINFTYSLALSPDGQFGS 499
>gi|380805245|gb|AFE74498.1| glutamate [NMDA] receptor subunit epsilon-1 isoform 1 precursor,
partial [Macaca mulatta]
Length = 453
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 363 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNT-VP 420
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFA 131
CR KI+ + + + +CC GFCID+L K +
Sbjct: 421 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLS 453
>gi|322787090|gb|EFZ13311.1| hypothetical protein SINV_00626 [Solenopsis invicta]
Length = 956
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 22/110 (20%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-PDPVTGKCNMNRGVICRVAGDAD 100
+I+WPG P+G HLK+ +EE P++ + PD KC +
Sbjct: 405 NIIWPGRLKIKPEGFMIPTHLKVLTIEEKPFVYVRELPDSDDAKCLPD------------ 452
Query: 101 MDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
++A H N G+C+DLL + A+ + FTY L DG++G+
Sbjct: 453 ----EIACPHFN-----MTDGYCVDLLKELAKTINFTYSLALSPDGQFGS 493
>gi|46195397|dbj|BAD15013.1| NMDA type glutamate receptor 3A [Taeniopygia guttata]
Length = 133
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 44 VWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDAD- 100
+WP H P + HL++ L E P++ D G C + + + D+
Sbjct: 9 IWPEQAQRHKSHMQHPTRLHLRVVTLIEHPFVFTRDVDD-EGLCPAGQLCLDPLTNDSGV 67
Query: 101 MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
+D + + N++ +CC G+CIDLL K AE++ F ++L V DGK+G
Sbjct: 68 LDSLFETLQGENDTVPIELKKCCYGYCIDLLEKLAEDMNFDFDLYIVGDGKYGA 121
>gi|47207253|emb|CAF91654.1| unnamed protein product [Tetraodon nigroviridis]
Length = 549
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 28/38 (73%)
Query: 117 QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
QCC GFCIDLL K A + FTYE+ V DGK+GTQE +
Sbjct: 52 QCCYGFCIDLLIKLAMTMNFTYEVHLVADGKFGTQERV 89
>gi|321460891|gb|EFX71929.1| hypothetical protein DAPPUDRAFT_255143 [Daphnia pulex]
Length = 1046
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 14/125 (11%)
Query: 30 WKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-PDPVTGKCNMN 88
++S K ++ +I WPG P+G LK+ + E P++ DP C
Sbjct: 409 YQSVLKLSVNDSEITWPGGLRHKPEGFIIPTFLKVMTIVEQPFVYARRVSDPSGESC--- 465
Query: 89 RGVICRVAGDADMDKI---DVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVED 145
+A D ++ + A + + FY CC G+CIDLL + A + FTY L D
Sbjct: 466 ------LAADGEVACPWFNNTADSSGTDRFY-CCRGYCIDLLKELARKNNFTYSLALSPD 518
Query: 146 GKWGT 150
G++G+
Sbjct: 519 GQFGS 523
>gi|195391966|ref|XP_002054630.1| GJ24560 [Drosophila virilis]
gi|223635340|sp|B4LZB5.1|NMDA1_DROVI RecName: Full=Glutamate [NMDA] receptor subunit 1; Flags: Precursor
gi|194152716|gb|EDW68150.1| GJ24560 [Drosophila virilis]
Length = 984
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 14/109 (12%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN-RGVICRVAGDAD 100
+I+W G P+G+ HLK+ +EE P++ + +C + R A DA
Sbjct: 397 EIIWGGKQKRKPEGIMIPTHLKVLTIEEKPFVYVRRMGDDEFRCEPDERPCPLFNASDAT 456
Query: 101 MDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
++ CC G+CIDLL + ++ + FTY+L DG++G
Sbjct: 457 TNEF-------------CCRGYCIDLLIELSKRINFTYDLALSPDGQFG 492
>gi|195109680|ref|XP_001999411.1| GI24494 [Drosophila mojavensis]
gi|223635336|sp|B4KD90.1|NMDA1_DROMO RecName: Full=Glutamate [NMDA] receptor subunit 1; Flags: Precursor
gi|193916005|gb|EDW14872.1| GI24494 [Drosophila mojavensis]
Length = 980
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 14/108 (12%)
Query: 43 IVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN-RGVICRVAGDADM 101
I+W G P+G+ HLK+ +EE P++ + +C + R A DA
Sbjct: 398 IIWGGKQRRKPEGIMIPTHLKVLTIEEKPFVYVRRMGDDEFRCEPDERPCPLFNASDATA 457
Query: 102 DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
++ CC G+CIDLL + ++ + FTY+L DG++G
Sbjct: 458 NEF-------------CCRGYCIDLLIELSKRINFTYDLALSPDGQFG 492
>gi|156572219|gb|ABU84987.1| ionotropic glutamate receptor subunit NR2C [Xenopus laevis]
Length = 78
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 61 HLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCS 120
HL + LEE P++ + DP TG C N V CR + ++ ++ CC
Sbjct: 5 HLTVATLEERPFVIVESTDPATGDCIRN-TVPCR-------KQSNLTLSSGEPYTKLCCK 56
Query: 121 GFCIDLLGKFAEELGFTYEL 140
GFCID+L K A + F+Y+L
Sbjct: 57 GFCIDILKKLARTVKFSYDL 76
>gi|360043813|emb|CCD81359.1| putative glutamate receptor, NMDA [Schistosoma mansoni]
Length = 1114
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 47/150 (31%)
Query: 37 GLDIKDIVWPGNS--------------------------HTPPQGVPEKFHLKITFLEEA 70
+++ ++WPGNS H P +K HLK+ +E
Sbjct: 241 SINLSKLIWPGNSIVKRQQLVCIQRANDGKCQKTEKRLVHAAPISFKKKTHLKVVTIESV 300
Query: 71 PYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESF----YQCCSGFCIDL 126
P++Q P ++ KCN + D + K ++ H + + + CC G+CIDL
Sbjct: 301 PFVQTHP--KLSDKCNE--------SDDPLVFKTEIECTHTDPTTGIKKHYCCYGYCIDL 350
Query: 127 LGKFAEELG-------FTYELVRVEDGKWG 149
L A G FTY+L V DG+ G
Sbjct: 351 LRLLANRTGLELTSTPFTYDLHLVGDGQVG 380
>gi|256071870|ref|XP_002572261.1| glutamate receptor NMDA [Schistosoma mansoni]
Length = 1260
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 47/150 (31%)
Query: 37 GLDIKDIVWPGNS--------------------------HTPPQGVPEKFHLKITFLEEA 70
+++ ++WPGNS H P +K HLK+ +E
Sbjct: 387 SINLSKLIWPGNSIVKRQQLVCIQRANDGKCQKTEKRLVHAAPISFKKKTHLKVVTIESV 446
Query: 71 PYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESF----YQCCSGFCIDL 126
P++Q P ++ KCN + D + K ++ H + + + CC G+CIDL
Sbjct: 447 PFVQTHP--KLSDKCNE--------SDDPLVFKTEIECTHTDPTTGIKKHYCCYGYCIDL 496
Query: 127 LGKFAEELG-------FTYELVRVEDGKWG 149
L A G FTY+L V DG+ G
Sbjct: 497 LRLLANRTGLELTSTPFTYDLHLVGDGQVG 526
>gi|432938249|ref|XP_004082497.1| PREDICTED: glutamate [NMDA] receptor subunit 3B-like [Oryzias
latipes]
Length = 1016
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 34/164 (20%)
Query: 8 SMIIEIELFHPTIFTSGICIG--VWKS---WEKEGLDIKDIVWPGNSHTPPQGVP----E 58
S I+ +LFH G +G W + W ++G G+ H + P E
Sbjct: 247 SRILSSQLFHVWSLKRG-ALGQPAWVTVGQWTRDG--------QGDGHVGGRWRPGLSVE 297
Query: 59 KFHLKITFLEEAPYI--------QMSPP-----DPVTGKCNMNRGVICRVAGDADMDKID 105
L++ L E P++ M P DP T + + +G+ ++ + +
Sbjct: 298 GHRLRVVTLVEHPFVFTREVDEDGMCPAGQLCLDPKTNRSEIIQGLYNQLH---NPNSTV 354
Query: 106 VAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
V + + +CC G+CIDLL K AE++GFT++L V DGK+G
Sbjct: 355 VDLEDLPDDLRKCCYGYCIDLLEKLAEDMGFTFDLYIVGDGKYG 398
>gi|301615950|ref|XP_002937428.1| PREDICTED: glutamate [NMDA] receptor subunit 3B-like [Xenopus
(Silurana) tropicalis]
Length = 1005
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 12/129 (9%)
Query: 33 WEKEGLDIKDIVWPGNSHT--PPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRG 90
W + +++++ +W P G + L++ L E P++ D G C G
Sbjct: 390 WRQGKMEVEEGLWQSRIQQWEPAPGGFARTKLRVVTLVEHPFVFTREVD-ADGSCPA--G 446
Query: 91 VIC---RVAGDADMDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRV 143
+C R A +D + + N S + CC G+CIDLL K +E+L F +EL V
Sbjct: 447 QMCLDPRTNNSAVLDVLFEELNSPNGSVPLEYKTCCYGYCIDLLEKLSEDLRFDFELYIV 506
Query: 144 EDGKWGTQE 152
DGK+G ++
Sbjct: 507 GDGKYGARK 515
>gi|334326788|ref|XP_003340800.1| PREDICTED: glutamate [NMDA] receptor subunit 3B [Monodelphis
domestica]
Length = 1117
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 56/129 (43%), Gaps = 24/129 (18%)
Query: 44 VWPG----NSHTPPQGV-------PEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
VWPG PP+ P+K L++ L E P++ D G C G +
Sbjct: 412 VWPGAGGLGGRMPPRSPLLENEVGPQK--LRVVTLVEHPFVFTREVDE-DGHCPA--GQL 466
Query: 93 CRVAGDADMDKIDVAMAHHNE--------SFYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
C G D + A +E +CC G+CIDLL + AE+L F +EL V
Sbjct: 467 CLDPGTNDSAVLGELFAALDEPGNGSVPRDLRKCCYGYCIDLLEQLAEDLSFAFELYIVG 526
Query: 145 DGKWGTQED 153
DGK+G D
Sbjct: 527 DGKYGAWRD 535
>gi|345787421|ref|XP_542210.3| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
3B, partial [Canis lupus familiaris]
Length = 966
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 52 PPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHH 111
P G + L++ L E P++ PD G+C G +C G D +D A
Sbjct: 353 PSPGARARPKLRVVTLVEHPFVFAREPDE-DGQCPA--GQLCLAPGTNDSAALDALFAAL 409
Query: 112 N-----ESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
+ +CC G+CIDLL + AE+ F +EL V DGK+G D
Sbjct: 410 ANGSVPRALRKCCYGYCIDLLERLAEDTPFDFELYIVGDGKYGALRD 456
>gi|326671755|ref|XP_002663775.2| PREDICTED: glutamate [NMDA] receptor subunit 3A-like [Danio rerio]
Length = 962
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 48/158 (30%), Positives = 69/158 (43%), Gaps = 37/158 (23%)
Query: 17 HPTIFTSGICIGVWKSWEKEGLDIKDI-VWPGNSHTPPQ---------------GVP-EK 59
PT T G SWE L++++ +W G+S P Q G P
Sbjct: 219 QPTWVTVG-------SWEGGRLNVEEQGLWQGSS--PRQRTEGQMGREGRRWRAGFPVSG 269
Query: 60 FHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKID---VAMAHHNESFY 116
L++ L E P++ D G C G C AG + +D A N+SF
Sbjct: 270 SRLRVVTLVEHPFVFTREVDE-DGNCPA--GQYCLDAGTNSSETLDHLYAERAQGNKSFL 326
Query: 117 -----QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
+CC G+CIDLL K +E++ F ++L V DGK+G
Sbjct: 327 PPDYSKCCYGYCIDLLEKLSEDMNFEFDLYIVGDGKYG 364
>gi|326671753|ref|XP_700069.5| PREDICTED: glutamate [NMDA] receptor subunit 3A-like [Danio rerio]
Length = 842
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 48/158 (30%), Positives = 69/158 (43%), Gaps = 37/158 (23%)
Query: 17 HPTIFTSGICIGVWKSWEKEGLDIKDI-VWPGNSHTPPQ---------------GVP-EK 59
PT T G SWE L++++ +W G+S P Q G P
Sbjct: 297 QPTWVTVG-------SWEGGRLNVEEQGLWQGSS--PRQRTEGQMGREGRRWRAGFPVSG 347
Query: 60 FHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKID---VAMAHHNESFY 116
L++ L E P++ D G C G C AG + +D A N+SF
Sbjct: 348 SRLRVVTLVEHPFVFTREVDE-DGNCPA--GQYCLDAGTNSSETLDHLYAERAQGNKSFL 404
Query: 117 -----QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
+CC G+CIDLL K +E++ F ++L V DGK+G
Sbjct: 405 PPDYSKCCYGYCIDLLEKLSEDMNFEFDLYIVGDGKYG 442
>gi|348527730|ref|XP_003451372.1| PREDICTED: glutamate [NMDA] receptor subunit 3A-like [Oreochromis
niloticus]
Length = 1132
Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 50/174 (28%), Positives = 76/174 (43%), Gaps = 40/174 (22%)
Query: 8 SMIIEIELFH-----------PTIFTSGICIGVWKSWEKEGLDIKDI-VWPG-------- 47
S +I ++ FH PT T G SWE L ++D VW G
Sbjct: 306 SEVITLQRFHIWSLRRDALGQPTWVTVG-------SWEDGSLQVEDQQVWQGPKPHHRMD 358
Query: 48 --NSHTPPQ---GVP-EKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDAD- 100
T Q G+P +++ L E P++ D G C + + A ++
Sbjct: 359 GMGGRTRGQWRAGLPVAGSRVRVVTLVEHPFVFTRDVDD-EGSCPAGQFCLDAAANSSET 417
Query: 101 MDKIDVAMAHHNES-----FYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
+++ +A N S + +CC G+CIDLL K AE+LGF ++L V DGK+G
Sbjct: 418 LERYFREVAGGNSSSLPRDYTKCCYGYCIDLLEKLAEDLGFEFDLYIVGDGKYG 471
>gi|260818069|ref|XP_002603907.1| hypothetical protein BRAFLDRAFT_241986 [Branchiostoma floridae]
gi|229289231|gb|EEN59918.1| hypothetical protein BRAFLDRAFT_241986 [Branchiostoma floridae]
Length = 365
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 62 LKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSG 121
L++ LEE P+I D +C G +C V + D + + A E +CC G
Sbjct: 1 LRVVTLEEHPFIFTRKLDE-NDQCPA--GTMCTVPKNRDEHNVTLDPASI-EVEKKCCYG 56
Query: 122 FCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
C DLL K +++L F YEL V DGK+G +D
Sbjct: 57 LCHDLLHKLSQDLNFQYELYVVRDGKYGGMKD 88
>gi|195036680|ref|XP_001989796.1| GH18993 [Drosophila grimshawi]
gi|223635309|sp|B4JHV0.1|NMDA1_DROGR RecName: Full=Glutamate [NMDA] receptor subunit 1; Flags: Precursor
gi|193893992|gb|EDV92858.1| GH18993 [Drosophila grimshawi]
Length = 982
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADM 101
+I+W G P+G+ HLK+ +EE P++ + +C + +
Sbjct: 395 EIIWGGKQKRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFRCEPD---------ERPC 445
Query: 102 DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
+ + A NE CC G+CIDLL + ++ + FTY+L DG++G
Sbjct: 446 PLFNASGATANEF---CCRGYCIDLLIELSKRINFTYDLALSPDGQFG 490
>gi|432888072|ref|XP_004075053.1| PREDICTED: glutamate [NMDA] receptor subunit 3A-like [Oryzias
latipes]
Length = 1182
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 22/104 (21%)
Query: 59 KFHLKITFLEEAPYI--------QMSPP-----DPVTGKCNMNRGVICRVAGDADMDKID 105
K H+++ L E P++ + P DP+T + ++ G+ ++ + +
Sbjct: 307 KLHMRVVTLVEHPFVFTREVDGDGLCPAGQLCLDPLTNESSVLEGLF------QNLGRRN 360
Query: 106 VAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
++ H +CC G+CIDLL K E++GFT++L V DGK+G
Sbjct: 361 GSVPTH---LKKCCYGYCIDLLEKLGEDMGFTFDLYIVGDGKYG 401
>gi|355561928|gb|EHH18560.1| hypothetical protein EGK_15196 [Macaca mulatta]
gi|355748777|gb|EHH53260.1| hypothetical protein EGM_13866 [Macaca fascicularis]
Length = 769
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 59/134 (44%), Gaps = 26/134 (19%)
Query: 40 IKDIVWPGNS----HTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNM-------- 87
IK+ W G + G+ F L + L+E ++ DP +G NM
Sbjct: 227 IKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASG-LNMTESQKGKP 285
Query: 88 --------NRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYE 139
NR +I K D + + N+ F G+CIDLL + + LGFTYE
Sbjct: 286 ANITDSLSNRSLIVTTILYVLFKKSDKPL-YGNDRF----EGYCIDLLRELSTILGFTYE 340
Query: 140 LVRVEDGKWGTQED 153
+ VEDGK+G Q+D
Sbjct: 341 IRLVEDGKYGAQDD 354
>gi|126310369|ref|XP_001367976.1| PREDICTED: glutamate receptor, ionotropic kainate 2 [Monodelphis
domestica]
Length = 908
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + A LGFTYE+ VEDGK+G Q+D+
Sbjct: 461 GYCIDLLRELATILGFTYEIRLVEDGKYGAQDDV 494
>gi|395534684|ref|XP_003769369.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like
[Sarcophilus harrisii]
Length = 631
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + A LGFTYE+ VEDGK+G Q+D+
Sbjct: 184 GYCIDLLRELATILGFTYEIRLVEDGKYGAQDDV 217
>gi|296234262|ref|XP_002807903.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
epsilon-4 [Callithrix jacchus]
Length = 1403
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 403 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 460
Query: 92 ICRVAGDADMDKIDVAMAHHNESFY---QCCSGFCIDLLGKFAEE 133
CR + + A + C GFCID+L + A++
Sbjct: 461 PCRSQLNRTHSLVPSPPALPPNAPPPEKTLCKGFCIDILKRLAQD 505
>gi|444706877|gb|ELW48194.1| Glutamate receptor, ionotropic kainate 3 [Tupaia chinensis]
Length = 1621
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 573 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 605
>gi|395513355|ref|XP_003760892.1| PREDICTED: uncharacterized protein LOC100931204 [Sarcophilus
harrisii]
Length = 869
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 117 QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
+CC G+CIDLL + AE+L F +EL V DGK+G D
Sbjct: 103 KCCYGYCIDLLERLAEDLPFAFELYIVGDGKYGAWRD 139
>gi|351706278|gb|EHB09197.1| Glutamate receptor, ionotropic kainate 2 [Heterocephalus glaber]
Length = 832
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGFTYE+ VEDGK+G Q+D
Sbjct: 385 GYCIDLLRELATILGFTYEIRLVEDGKYGAQDD 417
>gi|348526169|ref|XP_003450593.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like
[Oreochromis niloticus]
Length = 1128
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCIDLL + A LGFTYE+ V DGK+G+Q+D
Sbjct: 672 GFCIDLLKELANILGFTYEIRLVPDGKYGSQDD 704
>gi|238828213|pdb|3G3K|A Chain A, Crystal Structure Of The Glur6 Ligand Binding Domain Dimer
I442h K494e K665r I749l Q753k E757q Mutant With
Glutamate And Nacl At 1.24 Angstrom Resolution
gi|238828214|pdb|3G3K|B Chain B, Crystal Structure Of The Glur6 Ligand Binding Domain Dimer
I442h K494e K665r I749l Q753k E757q Mutant With
Glutamate And Nacl At 1.24 Angstrom Resolution
Length = 259
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 34 GYCIDLLRELSTHLGFTYEIRLVEDGKYGAQDDV 67
>gi|238828209|pdb|3G3I|A Chain A, Crystal Structure Of The Glur6 Ligand Binding Domain Dimer
I442h K494e I749l Q753k Mutant With Glutamate And Nacl
At 1.37 Angstrom Resolution
gi|238828210|pdb|3G3I|B Chain B, Crystal Structure Of The Glur6 Ligand Binding Domain Dimer
I442h K494e I749l Q753k Mutant With Glutamate And Nacl
At 1.37 Angstrom Resolution
Length = 259
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 34 GYCIDLLRELSTHLGFTYEIRLVEDGKYGAQDDV 67
>gi|238828211|pdb|3G3J|A Chain A, Crystal Structure Of The Glur6 Ligand Binding Domain Dimer
I442h K494e K665r I749l Q753k Mutant With Glutamate And
Nacl At 1.32 Angstrom Resolution
gi|238828212|pdb|3G3J|B Chain B, Crystal Structure Of The Glur6 Ligand Binding Domain Dimer
I442h K494e K665r I749l Q753k Mutant With Glutamate And
Nacl At 1.32 Angstrom Resolution
Length = 259
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 34 GYCIDLLRELSTHLGFTYEIRLVEDGKYGAQDDV 67
>gi|345328771|ref|XP_001506390.2| PREDICTED: glutamate receptor, ionotropic kainate 2
[Ornithorhynchus anatinus]
Length = 911
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGFTYE+ +EDGK+G Q+D
Sbjct: 464 GYCIDLLRELATILGFTYEIRLIEDGKYGAQDD 496
>gi|326933029|ref|XP_003212612.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like [Meleagris
gallopavo]
Length = 920
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGFTYE+ VEDGK+G Q+D
Sbjct: 465 GYCIDLLKELAVILGFTYEIRLVEDGKYGAQDD 497
>gi|328715966|ref|XP_001943401.2| PREDICTED: glutamate [NMDA] receptor subunit 1-like [Acyrthosiphon
pisum]
Length = 1223
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 21/143 (14%)
Query: 28 GVWKSWEKEG-----------LDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMS 76
G ++W+K G + + +VW G P G+ + ++ P++ M
Sbjct: 376 GYTRAWKKVGTVGPSGTGGQLVKLDSVVWAGGKMVPAVGLGRRAVYRVVTAIGPPFV-MH 434
Query: 77 PPDPVTGKCNMNRGVICRVAGDADMDKI-----DVAMAHHNESFYQ--CCSGFCIDLLGK 129
P +C RG+ C + D I DV + + +S + CC G IDLL K
Sbjct: 435 APLQQDRQCL--RGIQCYQMTTSSKDNITMIFKDVKLDANKKSLPETYCCFGLSIDLLEK 492
Query: 130 FAEELGFTYELVRVEDGKWGTQE 152
+++L F + L V DG +G+++
Sbjct: 493 MSKDLEFDFHLYLVADGTFGSRK 515
>gi|118101697|ref|XP_417766.2| PREDICTED: glutamate receptor, ionotropic kainate 3 [Gallus gallus]
Length = 919
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGFTYE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAVILGFTYEIRLVEDGKYGAQDD 496
>gi|344244450|gb|EGW00554.1| Glutamate receptor, ionotropic kainate 3 [Cricetulus griseus]
Length = 796
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 341 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 373
>gi|351714209|gb|EHB17128.1| Glutamate receptor, ionotropic kainate 3 [Heterocephalus glaber]
Length = 947
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 492 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 524
>gi|301779585|ref|XP_002925210.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like
[Ailuropoda melanoleuca]
Length = 940
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 485 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 517
>gi|3935134|gb|AAC80577.1| glutamate receptor subunit kainate subtype [Rattus norvegicus]
Length = 888
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 433 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 465
>gi|431891080|gb|ELK01957.1| Glutamate receptor, ionotropic kainate 3 [Pteropus alecto]
Length = 929
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 474 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 506
>gi|426328983|ref|XP_004025525.1| PREDICTED: glutamate receptor, ionotropic kainate 3, partial
[Gorilla gorilla gorilla]
Length = 919
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|354480211|ref|XP_003502301.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like
[Cricetulus griseus]
Length = 983
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 528 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 560
>gi|148698373|gb|EDL30320.1| mCG10879 [Mus musculus]
Length = 904
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 449 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 481
>gi|9506755|ref|NP_062182.1| glutamate receptor ionotropic, kainate 2 precursor [Rattus
norvegicus]
gi|56282|emb|CAA77647.1| glutamate receptor subunit (GluR6) kainate subtype [Rattus
norvegicus]
Length = 908
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 494
>gi|163659881|ref|NP_001104738.1| glutamate receptor ionotropic, kainate 2 isoform 1 precursor [Mus
musculus]
Length = 908
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 494
>gi|126153397|gb|AAI31641.1| Grik2 protein [Mus musculus]
Length = 874
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 494
>gi|380799711|gb|AFE71731.1| glutamate receptor, ionotropic kainate 3 precursor, partial [Macaca
mulatta]
Length = 880
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 425 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 457
>gi|56280|emb|CAA77778.1| kainate receptor [Rattus norvegicus]
Length = 908
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 494
>gi|3287965|sp|P42260.2|GRIK2_RAT RecName: Full=Glutamate receptor ionotropic, kainate 2;
Short=GluK2; AltName: Full=Glutamate receptor 6;
Short=GluR-6; Short=GluR6; Flags: Precursor
gi|149046911|gb|EDL99659.1| rCG58533, isoform CRA_b [Rattus norvegicus]
Length = 908
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 494
>gi|354492085|ref|XP_003508182.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like
[Cricetulus griseus]
Length = 897
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 450 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 483
>gi|126153354|gb|AAI31640.1| Grik2 protein [Mus musculus]
Length = 874
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 494
>gi|122065194|sp|P39087.4|GRIK2_MOUSE RecName: Full=Glutamate receptor ionotropic, kainate 2;
Short=GluK2; AltName: Full=Glutamate receptor 6;
Short=GluR-6; Short=GluR6; AltName: Full=Glutamate
receptor beta-2; Short=GluR beta-2; Flags: Precursor
gi|148673105|gb|EDL05052.1| glutamate receptor, ionotropic, kainate 2 (beta 2), isoform CRA_b
[Mus musculus]
Length = 908
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 494
>gi|432910378|ref|XP_004078337.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like [Oryzias
latipes]
Length = 918
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCIDLL + A LGFTYE+ V DGK+G+Q+D
Sbjct: 462 GFCIDLLKELAGLLGFTYEIRLVPDGKYGSQDD 494
>gi|281344418|gb|EFB20002.1| hypothetical protein PANDA_014659 [Ailuropoda melanoleuca]
Length = 881
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 426 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 458
>gi|148673104|gb|EDL05051.1| glutamate receptor, ionotropic, kainate 2 (beta 2), isoform CRA_a
[Mus musculus]
Length = 869
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 494
>gi|440908123|gb|ELR58181.1| Glutamate receptor, ionotropic kainate 3, partial [Bos grunniens
mutus]
Length = 881
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 426 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 458
>gi|149046910|gb|EDL99658.1| rCG58533, isoform CRA_a [Rattus norvegicus]
Length = 869
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 494
>gi|227861|prf||1712322A Glu receptor
Length = 884
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 494
>gi|397489050|ref|XP_003815550.1| PREDICTED: glutamate receptor, ionotropic kainate 3 [Pan paniscus]
Length = 1191
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 736 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 768
>gi|163659879|ref|NP_034479.2| glutamate receptor ionotropic, kainate 2 isoform 2 precursor [Mus
musculus]
Length = 869
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 494
>gi|194207686|ref|XP_001916673.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like [Equus
caballus]
Length = 970
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 515 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 547
>gi|312494|emb|CAA46907.1| glutamate receptor subunit GluR6C [Mus musculus]
gi|182888467|gb|AAI60298.1| Glutamate receptor, ionotropic, kainate 2 (beta 2) [synthetic
construct]
Length = 869
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 494
>gi|335291005|ref|XP_003356363.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like [Sus
scrofa]
Length = 936
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 481 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 513
>gi|790534|gb|AAB60407.1| EAA5 [Homo sapiens]
Length = 919
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|114555569|ref|XP_524666.2| PREDICTED: glutamate receptor, ionotropic kainate 3 isoform 2 [Pan
troglodytes]
Length = 919
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|348571485|ref|XP_003471526.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like [Cavia
porcellus]
Length = 1084
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 629 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 661
>gi|256997164|dbj|BAI22775.1| glutamate receptor, ionotropic, kainate 3 [Pan troglodytes]
Length = 919
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|163659915|ref|NP_001106187.1| glutamate receptor ionotropic, kainate 3 isoform 1 precursor
[Rattus norvegicus]
gi|149023932|gb|EDL80429.1| glutamate receptor, ionotropic, kainate 3, isoform CRA_a [Rattus
norvegicus]
Length = 919
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|28605145|ref|NP_000822.2| glutamate receptor ionotropic, kainate 3 precursor [Homo sapiens]
gi|212276502|sp|Q13003.3|GRIK3_HUMAN RecName: Full=Glutamate receptor ionotropic, kainate 3;
Short=GluK3; AltName: Full=Excitatory amino acid
receptor 5; Short=EAA5; AltName: Full=Glutamate receptor
7; Short=GluR-7; Short=GluR7; Flags: Precursor
gi|119627756|gb|EAX07351.1| glutamate receptor, ionotropic, kainate 3, isoform CRA_b [Homo
sapiens]
gi|162319064|gb|AAI56722.1| Glutamate receptor, ionotropic, kainate 3 [synthetic construct]
Length = 919
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|124487364|ref|NP_001074566.1| glutamate receptor ionotropic, kainate 3 precursor [Mus musculus]
gi|385178634|sp|B1AS29.1|GRIK3_MOUSE RecName: Full=Glutamate receptor ionotropic, kainate 3;
Short=GluK3; AltName: Full=Glutamate receptor 7;
Short=GluR-7; Short=GluR7; Flags: Precursor
gi|182888083|gb|AAI60379.1| Glutamate receptor, ionotropic, kainate 3 [synthetic construct]
Length = 919
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|403293062|ref|XP_003937542.1| PREDICTED: glutamate receptor, ionotropic kainate 3 [Saimiri
boliviensis boliviensis]
Length = 919
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|402853959|ref|XP_003891655.1| PREDICTED: glutamate receptor, ionotropic kainate 3 [Papio anubis]
Length = 919
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|395830179|ref|XP_003788212.1| PREDICTED: glutamate receptor, ionotropic kainate 3 [Otolemur
garnettii]
Length = 919
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|109002088|ref|XP_001111351.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like isoform 2
[Macaca mulatta]
Length = 919
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|1169965|sp|P42264.1|GRIK3_RAT RecName: Full=Glutamate receptor ionotropic, kainate 3;
Short=GluK3; AltName: Full=Glutamate receptor 7;
Short=GluR-7; Short=GluR7; Flags: Precursor
gi|471274|emb|CAA77779.1| kainate receptor [Rattus norvegicus]
Length = 919
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|122063507|sp|Q38PU2.1|GRIK3_MACFA RecName: Full=Glutamate receptor ionotropic, kainate 3;
Short=GluK3; AltName: Full=Glutamate receptor 7;
Short=GluR-7; Short=GluR7; Flags: Precursor
gi|76574782|gb|ABA47259.1| GluR7 [Macaca fascicularis]
Length = 919
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|158257362|dbj|BAF84654.1| unnamed protein product [Homo sapiens]
Length = 583
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|359321276|ref|XP_850331.3| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor, ionotropic
kainate 3 [Canis lupus familiaris]
Length = 919
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|345327231|ref|XP_001510480.2| PREDICTED: glutamate receptor, ionotropic kainate 3-like
[Ornithorhynchus anatinus]
Length = 900
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 112 NESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
NE F GFCIDLL + A LGFTY++ EDGK+G Q+D
Sbjct: 459 NERF----EGFCIDLLKELAHILGFTYDIRLAEDGKYGAQDD 496
>gi|329664662|ref|NP_001192932.1| glutamate receptor, ionotropic kainate 3 precursor [Bos taurus]
gi|296488996|tpg|DAA31109.1| TPA: Glutamate receptor, ionotropic kainate 3-like [Bos taurus]
Length = 919
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|410966796|ref|XP_003989915.1| PREDICTED: glutamate receptor, ionotropic kainate 3 [Felis catus]
Length = 919
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|39645633|gb|AAH63814.1| GRIK2 protein [Homo sapiens]
Length = 583
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|441633964|ref|XP_003273333.2| PREDICTED: glutamate receptor, ionotropic kainate 3 [Nomascus
leucogenys]
Length = 838
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 430 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 462
>gi|109287551|gb|AAI18005.1| Grik3 protein [Mus musculus]
Length = 895
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 462 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 494
>gi|296207508|ref|XP_002750728.1| PREDICTED: glutamate receptor, ionotropic kainate 3 [Callithrix
jacchus]
Length = 1126
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 671 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 703
>gi|220409|dbj|BAA00943.1| glutamate receptor channel subunit beta-2 [Mus musculus]
gi|737901|prf||1923384A Glu receptor:SUBUNIT=beta2
Length = 864
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 494
>gi|355745147|gb|EHH49772.1| hypothetical protein EGM_00487 [Macaca fascicularis]
Length = 967
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 469 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 501
>gi|344287220|ref|XP_003415352.1| PREDICTED: glutamate receptor, ionotropic kainate 3 [Loxodonta
africana]
Length = 833
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 378 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 410
>gi|297291419|ref|XP_001086640.2| PREDICTED: glutamate receptor, ionotropic kainate 2-like isoform 2
[Macaca mulatta]
Length = 828
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|332218571|ref|XP_003258428.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 4
[Nomascus leucogenys]
Length = 859
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 412 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 444
>gi|224048376|ref|XP_002196529.1| PREDICTED: glutamate receptor, ionotropic kainate 2 [Taeniopygia
guttata]
Length = 908
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGF+YE+ VEDGK+G QED
Sbjct: 461 GYCIDLLRELSTILGFSYEIRLVEDGKYGAQED 493
>gi|355557832|gb|EHH14612.1| hypothetical protein EGK_00568 [Macaca mulatta]
Length = 928
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 430 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 462
>gi|297665470|ref|XP_002811085.1| PREDICTED: glutamate receptor, ionotropic kainate 3, partial [Pongo
abelii]
Length = 697
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|363732091|ref|XP_426186.3| PREDICTED: glutamate receptor, ionotropic kainate 2 [Gallus gallus]
Length = 915
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGF+YE+ VEDGK+G QED
Sbjct: 468 GYCIDLLRELSTILGFSYEIRLVEDGKYGAQED 500
>gi|344246359|gb|EGW02463.1| Glutamate receptor, ionotropic kainate 2 [Cricetulus griseus]
Length = 201
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 79 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 112
>gi|297678774|ref|XP_002817237.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Pongo
abelii]
Length = 639
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 387 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 419
>gi|797414|gb|AAB31362.1| GluR6 kainate receptor=ionotropic-type glutamate receptor [human,
caudate/putamen, Peptide, 908 aa]
Length = 908
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|431838117|gb|ELK00049.1| Glutamate receptor, ionotropic kainate 2 [Pteropus alecto]
Length = 859
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 412 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 444
>gi|60594189|pdb|1YAE|A Chain A, Structure Of The Kainate Receptor Subunit Glur6 Agonist
Binding Domain Complexed With Domoic Acid
gi|60594190|pdb|1YAE|B Chain B, Structure Of The Kainate Receptor Subunit Glur6 Agonist
Binding Domain Complexed With Domoic Acid
gi|60594191|pdb|1YAE|C Chain C, Structure Of The Kainate Receptor Subunit Glur6 Agonist
Binding Domain Complexed With Domoic Acid
gi|60594192|pdb|1YAE|D Chain D, Structure Of The Kainate Receptor Subunit Glur6 Agonist
Binding Domain Complexed With Domoic Acid
gi|60594193|pdb|1YAE|E Chain E, Structure Of The Kainate Receptor Subunit Glur6 Agonist
Binding Domain Complexed With Domoic Acid
gi|60594194|pdb|1YAE|F Chain F, Structure Of The Kainate Receptor Subunit Glur6 Agonist
Binding Domain Complexed With Domoic Acid
Length = 312
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 43 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 76
>gi|2598978|gb|AAC53462.1| kainate receptor GluR7b [Rattus norvegicus]
Length = 910
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|348560538|ref|XP_003466070.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like isoform 1
[Cavia porcellus]
Length = 908
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|221044710|dbj|BAH14032.1| unnamed protein product [Homo sapiens]
Length = 859
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 412 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 444
>gi|11386137|ref|NP_068775.1| glutamate receptor ionotropic, kainate 2 isoform 1 precursor [Homo
sapiens]
gi|257796300|ref|NP_001158172.1| glutamate receptor, ionotropic kainate 2 [Pan troglodytes]
gi|296198866|ref|XP_002746910.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 1
[Callithrix jacchus]
gi|332218565|ref|XP_003258425.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 1
[Nomascus leucogenys]
gi|397507857|ref|XP_003824398.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 1 [Pan
paniscus]
gi|2492627|sp|Q13002.1|GRIK2_HUMAN RecName: Full=Glutamate receptor ionotropic, kainate 2;
Short=GluK2; AltName: Full=Excitatory amino acid
receptor 4; Short=EAA4; AltName: Full=Glutamate receptor
6; Short=GluR-6; Short=GluR6; Flags: Precursor
gi|790532|gb|AAC50420.1| EAA4 [Homo sapiens]
gi|119568833|gb|EAW48448.1| glutamate receptor, ionotropic, kainate 2, isoform CRA_c [Homo
sapiens]
gi|256997162|dbj|BAI22774.1| glutamate receptor, ionotropic, kainate 2 [Pan troglodytes]
gi|296932850|gb|ADH93569.1| glutamate receptor form A [Homo sapiens]
gi|380783197|gb|AFE63474.1| glutamate receptor, ionotropic kainate 2 isoform 1 precursor
[Macaca mulatta]
Length = 908
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|345778256|ref|XP_539059.3| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 3
[Canis lupus familiaris]
Length = 908
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|344264581|ref|XP_003404370.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 1
[Loxodonta africana]
Length = 908
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|291396689|ref|XP_002714840.1| PREDICTED: glutamate receptor, ionotropic, kainate 2-like
[Oryctolagus cuniculus]
Length = 908
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|156572221|gb|ABU84988.1| ionotropic glutamate receptor subunit NR2D [Xenopus laevis]
Length = 101
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VW Q V + HL + LEE P++ + DP TG C + V
Sbjct: 12 WEHGELRMKYPVWSRYGKFL-QPVDDDQHLTVATLEERPFVIVEGVDPATGTC-IRDSVP 69
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLL 127
CR +++ D + QCC GFCID+L
Sbjct: 70 CR----KQLNRTDNQLTDPIIFVKQCCKGFCIDIL 100
>gi|149722834|ref|XP_001503964.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 1
[Equus caballus]
gi|301779720|ref|XP_002925277.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like isoform 1
[Ailuropoda melanoleuca]
Length = 908
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|17384613|emb|CAC80548.1| glutamate/kainate receptor subtype GluR7 [Homo sapiens]
gi|119627755|gb|EAX07350.1| glutamate receptor, ionotropic, kainate 3, isoform CRA_a [Homo
sapiens]
Length = 872
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|426215188|ref|XP_004001856.1| PREDICTED: glutamate receptor, ionotropic kainate 3 [Ovis aries]
Length = 973
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|403261061|ref|XP_003922954.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 908
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|344264583|ref|XP_003404371.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 2
[Loxodonta africana]
Length = 893
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|300796362|ref|NP_001179992.1| glutamate receptor, ionotropic kainate 2 [Bos taurus]
gi|426234623|ref|XP_004011292.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 1 [Ovis
aries]
Length = 908
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|15028907|emb|CAC44965.1| glutamate receptor 7 [Homo sapiens]
Length = 872
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|122063506|sp|Q38PU3.1|GRIK2_MACFA RecName: Full=Glutamate receptor ionotropic, kainate 2;
Short=GluK2; AltName: Full=Glutamate receptor 6;
Short=GluR-6; Short=GluR6; Flags: Precursor
gi|76574780|gb|ABA47258.1| GluR6 [Macaca fascicularis]
Length = 908
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|395860245|ref|XP_003802424.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 1
[Otolemur garnettii]
Length = 905
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|296932858|gb|ADH93573.1| glutamate receptor form E [Homo sapiens]
Length = 687
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|9623184|gb|AAF90049.1|AF245444_1 kainate receptor GluR7 3 subunit [Mus musculus]
Length = 517
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 62 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 94
>gi|403261065|ref|XP_003922956.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 3
[Saimiri boliviensis boliviensis]
Length = 892
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|17384624|emb|CAC81020.1| kainate receptor subunit [Homo sapiens]
gi|296932854|gb|ADH93571.1| glutamate receptor form C [Homo sapiens]
Length = 892
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|344264585|ref|XP_003404372.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 3
[Loxodonta africana]
Length = 869
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|296932856|gb|ADH93572.1| glutamate receptor form D [Homo sapiens]
Length = 682
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|426234625|ref|XP_004011293.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 2 [Ovis
aries]
Length = 869
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|261278362|ref|NP_001159719.1| glutamate receptor ionotropic, kainate 2 isoform 3 precursor [Homo
sapiens]
gi|332218567|ref|XP_003258426.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 2
[Nomascus leucogenys]
gi|390461926|ref|XP_003732763.1| PREDICTED: glutamate receptor, ionotropic kainate 2 [Callithrix
jacchus]
gi|397507861|ref|XP_003824400.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 3 [Pan
paniscus]
Length = 892
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|163659913|ref|NP_852038.2| glutamate receptor ionotropic, kainate 3 isoform 2 precursor
[Rattus norvegicus]
gi|149023933|gb|EDL80430.1| glutamate receptor, ionotropic, kainate 3, isoform CRA_b [Rattus
norvegicus]
Length = 910
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>gi|403261063|ref|XP_003922955.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 869
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|301779724|ref|XP_002925279.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like isoform 3
[Ailuropoda melanoleuca]
gi|338710690|ref|XP_003362401.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 3
[Equus caballus]
Length = 869
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|158260107|dbj|BAF82231.1| unnamed protein product [Homo sapiens]
Length = 908
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|28559003|ref|NP_786944.1| glutamate receptor ionotropic, kainate 2 isoform 2 precursor [Homo
sapiens]
gi|332218569|ref|XP_003258427.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 3
[Nomascus leucogenys]
gi|390461924|ref|XP_002746911.2| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 2
[Callithrix jacchus]
gi|397507859|ref|XP_003824399.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 2 [Pan
paniscus]
gi|15485592|emb|CAC67487.1| GluR6 kainate receptor [Homo sapiens]
gi|119568831|gb|EAW48446.1| glutamate receptor, ionotropic, kainate 2, isoform CRA_a [Homo
sapiens]
Length = 869
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|395860249|ref|XP_003802426.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 3
[Otolemur garnettii]
Length = 682
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|296932852|gb|ADH93570.1| glutamate receptor form B [Homo sapiens]
Length = 869
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|348560540|ref|XP_003466071.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like isoform 2
[Cavia porcellus]
Length = 869
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|338710688|ref|XP_003362400.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 2
[Equus caballus]
Length = 893
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|281354574|gb|EFB30158.1| hypothetical protein PANDA_014739 [Ailuropoda melanoleuca]
Length = 870
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 423 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 455
>gi|395860247|ref|XP_003802425.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 2
[Otolemur garnettii]
Length = 688
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|345778258|ref|XP_003431709.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 1
[Canis lupus familiaris]
Length = 893
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|301779722|ref|XP_002925278.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like isoform 2
[Ailuropoda melanoleuca]
Length = 893
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|426234627|ref|XP_004011294.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 3 [Ovis
aries]
Length = 893
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|345778260|ref|XP_003431710.1| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 2
[Canis lupus familiaris]
Length = 869
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>gi|322812225|pdb|2XXW|A Chain A, Crystal Structure Of The Gluk2 (Glur6) D776k Lbd Dimer In
Complex With Glutamate
gi|322812226|pdb|2XXW|B Chain B, Crystal Structure Of The Gluk2 (Glur6) D776k Lbd Dimer In
Complex With Glutamate
gi|322812227|pdb|2XXX|A Chain A, Crystal Structure Of The Gluk2 (Glur6) D776k Lbd Dimer In
Complex With Glutamate (P21 21 21)
gi|322812228|pdb|2XXX|B Chain B, Crystal Structure Of The Gluk2 (Glur6) D776k Lbd Dimer In
Complex With Glutamate (P21 21 21)
gi|322812229|pdb|2XXX|C Chain C, Crystal Structure Of The Gluk2 (Glur6) D776k Lbd Dimer In
Complex With Glutamate (P21 21 21)
gi|322812230|pdb|2XXX|D Chain D, Crystal Structure Of The Gluk2 (Glur6) D776k Lbd Dimer In
Complex With Glutamate (P21 21 21)
gi|322812231|pdb|2XXY|A Chain A, Crystal Structure Of The Gluk2 (Glur6) D776k Lbd Dimer In
Complex With Kainate
gi|322812232|pdb|2XXY|B Chain B, Crystal Structure Of The Gluk2 (Glur6) D776k Lbd Dimer In
Complex With Kainate
gi|322812233|pdb|2XXY|C Chain C, Crystal Structure Of The Gluk2 (Glur6) D776k Lbd Dimer In
Complex With Kainate
gi|322812234|pdb|2XXY|D Chain D, Crystal Structure Of The Gluk2 (Glur6) D776k Lbd Dimer In
Complex With Kainate
Length = 261
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 34 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 67
>gi|322812217|pdb|2XXR|A Chain A, Crystal Structure Of The Gluk2 (Glur6) Wild-Type Lbd Dimer
In Complex With Glutamate
gi|322812218|pdb|2XXR|B Chain B, Crystal Structure Of The Gluk2 (Glur6) Wild-Type Lbd Dimer
In Complex With Glutamate
gi|322812219|pdb|2XXT|A Chain A, Crystal Structure Of The Gluk2 (Glur6) Wild-Type Lbd Dimer
In Complex With Kainate
gi|322812220|pdb|2XXT|B Chain B, Crystal Structure Of The Gluk2 (Glur6) Wild-Type Lbd Dimer
In Complex With Kainate
Length = 261
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 34 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 67
>gi|395526575|ref|XP_003765436.1| PREDICTED: glutamate receptor, ionotropic kainate 3 [Sarcophilus
harrisii]
Length = 766
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGFTYE+ VEDGK+G Q++
Sbjct: 311 GYCIDLLKELAHILGFTYEIRLVEDGKYGAQDE 343
>gi|322812221|pdb|2XXU|A Chain A, Crystal Structure Of The Gluk2 (Glur6) M770k Lbd Dimer In
Complex With Glutamate
gi|322812222|pdb|2XXU|B Chain B, Crystal Structure Of The Gluk2 (Glur6) M770k Lbd Dimer In
Complex With Glutamate
gi|322812223|pdb|2XXV|A Chain A, Crystal Structure Of The Gluk2 (Glur6) M770k Lbd Dimer In
Complex With Kainate
gi|322812224|pdb|2XXV|B Chain B, Crystal Structure Of The Gluk2 (Glur6) M770k Lbd Dimer In
Complex With Kainate
Length = 261
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 34 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 67
>gi|238828205|pdb|3G3G|A Chain A, Crystal Structure Of The Glur6 Ligand Binding Domain Dimer
K665r Mutant With Glutamate And Nacl At 1.3 Angstrom
Resolution
gi|238828206|pdb|3G3G|B Chain B, Crystal Structure Of The Glur6 Ligand Binding Domain Dimer
K665r Mutant With Glutamate And Nacl At 1.3 Angstrom
Resolution
Length = 259
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 34 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 67
>gi|409187917|pdb|2I0C|A Chain A, Crystal Structure Of The Glur6 Ligand Binding Core Dimer
Crosslinked By Disulfide Bonds Between Y490c And L752c
At 2.25 Angstroms Resolution
gi|409187918|pdb|2I0C|B Chain B, Crystal Structure Of The Glur6 Ligand Binding Core Dimer
Crosslinked By Disulfide Bonds Between Y490c And L752c
At 2.25 Angstroms Resolution
Length = 259
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 34 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 67
>gi|449282922|gb|EMC89653.1| Glutamate receptor, ionotropic kainate 2 [Columba livia]
Length = 600
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGF+YE+ VEDGK+G QED
Sbjct: 153 GYCIDLLRELSTILGFSYEIRLVEDGKYGAQED 185
>gi|61679849|pdb|1S50|A Chain A, X-Ray Structure Of The Glur6 Ligand Binding Core (S1s2a)
In Complex With Glutamate At 1.65 A Resolution
gi|61679851|pdb|1S7Y|A Chain A, Crystal Structure Of The Glur6 Ligand Binding Core In
Complex With Glutamate At 1.75 A Resolution Orthorhombic
Form
gi|61679852|pdb|1S7Y|B Chain B, Crystal Structure Of The Glur6 Ligand Binding Core In
Complex With Glutamate At 1.75 A Resolution Orthorhombic
Form
gi|61679878|pdb|1S9T|A Chain A, Crystal Structure Of The Glur6 Ligand Binding Core In
Complex With Quisqualate At 1.8a Resolution
gi|61679879|pdb|1S9T|B Chain B, Crystal Structure Of The Glur6 Ligand Binding Core In
Complex With Quisqualate At 1.8a Resolution
gi|61679887|pdb|1SD3|A Chain A, Crystal Structure Of The Glur6 Ligand Binding Core In
Complex With 2s,4r-4-Methylglutamate At 1.8 Angstrom
Resolution
gi|61679888|pdb|1SD3|B Chain B, Crystal Structure Of The Glur6 Ligand Binding Core In
Complex With 2s,4r-4-Methylglutamate At 1.8 Angstrom
Resolution
gi|61680003|pdb|1TT1|A Chain A, Crystal Structure Of The Glur6 Ligand Binding Core In
Complex With Kainate 1.93 A Resolution
gi|61680004|pdb|1TT1|B Chain B, Crystal Structure Of The Glur6 Ligand Binding Core In
Complex With Kainate 1.93 A Resolution
gi|238828203|pdb|3G3F|A Chain A, Crystal Structure Of The Glur6 Ligand Binding Domain Dimer
With Glutamate And Nacl At 1.38 Angstrom Resolution
gi|238828204|pdb|3G3F|B Chain B, Crystal Structure Of The Glur6 Ligand Binding Domain Dimer
With Glutamate And Nacl At 1.38 Angstrom Resolution
Length = 259
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 34 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 67
>gi|410959744|ref|XP_003986460.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Felis
catus]
Length = 640
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 193 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 225
>gi|238828207|pdb|3G3H|A Chain A, Crystal Structure Of The Glur6 Ligand Binding Domain Dimer
K665r I749l Q753k Mutant With Glutamate And Nacl At 1.5
Angstrom Resolution
gi|238828208|pdb|3G3H|B Chain B, Crystal Structure Of The Glur6 Ligand Binding Domain Dimer
K665r I749l Q753k Mutant With Glutamate And Nacl At 1.5
Angstrom Resolution
Length = 259
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 34 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 67
>gi|119390003|pdb|2I0B|A Chain A, Crystal Structure Of The Glur6 Ligand Binding Core Elkq
Mutant Dimer At 1.96 Angstroms Resolution
gi|119390004|pdb|2I0B|B Chain B, Crystal Structure Of The Glur6 Ligand Binding Core Elkq
Mutant Dimer At 1.96 Angstroms Resolution
gi|119390005|pdb|2I0B|C Chain C, Crystal Structure Of The Glur6 Ligand Binding Core Elkq
Mutant Dimer At 1.96 Angstroms Resolution
Length = 259
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 34 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 67
>gi|406855516|pdb|3U92|A Chain A, Crystal Structure Of The Gluk3 Ligand Binding Domain
Complex With Kainate And Zinc: P2221 Form
gi|406855517|pdb|3U92|B Chain B, Crystal Structure Of The Gluk3 Ligand Binding Domain
Complex With Kainate And Zinc: P2221 Form
gi|406855518|pdb|3U93|A Chain A, Crystal Structure Of The Gluk3 Ligand Binding Domain
Complex With Glutamate And Zinc: P2221 Form
gi|406855519|pdb|3U93|B Chain B, Crystal Structure Of The Gluk3 Ligand Binding Domain
Complex With Glutamate And Zinc: P2221 Form
gi|406855520|pdb|3U94|A Chain A, Crystal Structure Of The Gluk3 Ligand Binding Domain
Complex With Glutamate And Zinc: P21212 Form
gi|406855521|pdb|3U94|B Chain B, Crystal Structure Of The Gluk3 Ligand Binding Domain
Complex With Glutamate And Zinc: P21212 Form
gi|406855522|pdb|3U94|C Chain C, Crystal Structure Of The Gluk3 Ligand Binding Domain
Complex With Glutamate And Zinc: P21212 Form
gi|406855523|pdb|3U94|D Chain D, Crystal Structure Of The Gluk3 Ligand Binding Domain
Complex With Glutamate And Zinc: P21212 Form
Length = 257
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 34 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 66
>gi|402867761|ref|XP_003898003.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Papio
anubis]
Length = 613
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 166 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 198
>gi|347948632|pdb|3S9E|A Chain A, Crystal Structure Of The Kainate Receptor Gluk3 Ligand
Binding Domain In Complex With (S)-Glutamate
gi|347948633|pdb|3S9E|B Chain B, Crystal Structure Of The Kainate Receptor Gluk3 Ligand
Binding Domain In Complex With (S)-Glutamate
gi|385867813|pdb|4E0W|A Chain A, Crystal Structure Of The Kainate Receptor Gluk3 Ligand
Binding Domain In Complex With Kainate
gi|402550581|pdb|4G8N|A Chain A, Crystal Structure Of The Kainate Receptor Gluk3
Ligand-Binding Domain In Complex With The Agonist G8m
Length = 258
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 36 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 68
>gi|350578311|ref|XP_003121367.3| PREDICTED: glutamate receptor, ionotropic kainate 2 isoform 2,
partial [Sus scrofa]
Length = 598
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 144 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 176
>gi|358342403|dbj|GAA28489.2| glutamate [NMDA] receptor subunit 1 [Clonorchis sinensis]
Length = 935
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 58/151 (38%), Gaps = 46/151 (30%)
Query: 38 LDIKDIVWPGN--------------------------SHTPPQGVPEKFHLKITFLEEAP 71
+++ IVWPGN + P +K HL++ P
Sbjct: 353 INMSAIVWPGNLIDQRAQLVCVQRNEDGTCRQTDKQVIASAPLSFKKKTHLRVVTALSKP 412
Query: 72 YIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNE----SFYQCCSGFCIDLL 127
++ P K + R C + D +++V H + + + CCSGFCIDLL
Sbjct: 413 FVNRRP------KLSGER---CNESDDPTQPRMEVECTHTDPDTGVTSHYCCSGFCIDLL 463
Query: 128 GKFAEELG-------FTYELVRVEDGKWGTQ 151
A G FTY+L V DG+ G +
Sbjct: 464 RHLANRTGFEVNPTLFTYDLHLVGDGQIGEE 494
>gi|296484117|tpg|DAA26232.1| TPA: glutamate receptor, ionotropic, kainate 2 [Bos taurus]
Length = 606
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 159 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 191
>gi|126330386|ref|XP_001380859.1| PREDICTED: glutamate receptor, ionotropic kainate 3 [Monodelphis
domestica]
Length = 919
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGFTYE+ VEDGK+G Q++
Sbjct: 464 GYCIDLLKELAHILGFTYEIRLVEDGKYGAQDE 496
>gi|354459556|pdb|3QXM|A Chain A, Crystal Structure Of Human Gluk2 Ligand-Binding Core In
Complex With Novel Marine-Derived Toxins,
Neodysiherbaine A
gi|354459557|pdb|3QXM|B Chain B, Crystal Structure Of Human Gluk2 Ligand-Binding Core In
Complex With Novel Marine-Derived Toxins,
Neodysiherbaine A
Length = 258
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 33 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 65
>gi|395528858|ref|XP_003766541.1| PREDICTED: glutamate-rich WD repeat-containing protein 1
[Sarcophilus harrisii]
Length = 699
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 117 QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
+CC GFCID+L + A+ +GF+Y+L V +GK G + D
Sbjct: 148 RCCKGFCIDILKRLAQTIGFSYDLYLVTNGKHGKKID 184
>gi|301618517|ref|XP_002938663.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like [Xenopus
(Silurana) tropicalis]
Length = 845
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCIDLL K AE LGF Y++ VED K+G+Q++
Sbjct: 435 GFCIDLLKKIAEILGFDYDIRLVEDAKYGSQDE 467
>gi|299007029|gb|ADJ00044.1| GluR6 [Zalophus californianus]
Length = 252
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 128 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 160
>gi|432907872|ref|XP_004077698.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Oryzias
latipes]
Length = 907
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGFTYE+ VEDGK+G Q++
Sbjct: 460 GYCIDLLRELASILGFTYEVRLVEDGKYGVQDE 492
>gi|291408780|ref|XP_002720695.1| PREDICTED: Glutamate receptor, ionotropic kainate 3-like
[Oryctolagus cuniculus]
Length = 919
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELSHILGFSYEIRLVEDGKYGAQDD 496
>gi|71989779|ref|NP_741822.2| Protein GLR-6, isoform a [Caenorhabditis elegans]
gi|351060272|emb|CCD67907.1| Protein GLR-6, isoform a [Caenorhabditis elegans]
Length = 844
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 59/144 (40%), Gaps = 36/144 (25%)
Query: 12 EIELFHPTIFTSGICIGVWKS-WE-KEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEE 69
E+ ++ I +G+ G+WKS WE + L + PG V E LK+T + E
Sbjct: 359 ELHIWEMGITGAGLHTGIWKSTWEGSKELTMLAKNIPGTHEHYQASVRESRTLKVTSIHE 418
Query: 70 APYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGK 129
PY VI ++ D + GFC+DLL K
Sbjct: 419 KPY------------------VIEKIMPDGRIKH----------------EGFCVDLLDK 444
Query: 130 FAEELGFTYELVRVEDGKWGTQED 153
AE L F Y L V+D K+G +++
Sbjct: 445 LAEMLHFNYTLKIVKDNKYGERKN 468
>gi|218675635|gb|AAI69223.2| N-methyl-D-aspartate receptor subunit 2D precursor [synthetic
construct]
Length = 409
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 117 QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
+CC GFCID+L + A +GF+Y+L V +GK G + D
Sbjct: 18 RCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKKID 54
>gi|47210498|emb|CAF93180.1| unnamed protein product [Tetraodon nigroviridis]
Length = 423
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 4/44 (9%)
Query: 110 HHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
+ NE F G+C+DLL + A LGFTYE+ VEDGK+G+Q++
Sbjct: 121 YGNERF----EGYCMDLLKELASILGFTYEVHLVEDGKYGSQDE 160
>gi|405951188|gb|EKC19122.1| Glutamate [NMDA] receptor subunit 1 [Crassostrea gigas]
Length = 968
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 29/128 (22%)
Query: 37 GLDIKD--IVWPGNSHTPPQGVPEKFHLK--------ITFLEEAPYI---QMSPPDPVTG 83
L+IKD I+WPG T P G+ LK + LE P++ +M+ D
Sbjct: 373 ALEIKDSKIIWPGKKTTKPSGINISTELKASIRRMQRVVTLESVPFVYTRKMTGSD---- 428
Query: 84 KCNMNRG-VICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
CN ++ +C + + + D CC G+CID+L + A+ + FTY +
Sbjct: 429 SCNWDKNERLCPLVNETTGIREDY-----------CCWGYCIDMLIQIADMVNFTYSIHL 477
Query: 143 VEDGKWGT 150
G++G+
Sbjct: 478 GSSGEFGS 485
>gi|410949975|ref|XP_003981692.1| PREDICTED: glutamate [NMDA] receptor subunit 3B, partial [Felis
catus]
Length = 716
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 117 QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
+CC G+CIDLL + AE+ F +EL V DGK+G D
Sbjct: 49 KCCYGYCIDLLERLAEDAPFDFELYIVGDGKYGALRD 85
>gi|327261476|ref|XP_003215556.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Anolis
carolinensis]
Length = 911
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G ++D
Sbjct: 464 GYCIDLLRELSTFLGFTYEIRLVEDGKYGARDD 496
>gi|326664903|ref|XP_694772.4| PREDICTED: glutamate [NMDA] receptor subunit 3A-like [Danio rerio]
Length = 765
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 117 QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
+CC G+CIDLL K AE++ F ++L V DGK+G
Sbjct: 360 KCCYGYCIDLLEKLAEDMHFEFDLYIVGDGKYG 392
>gi|410904483|ref|XP_003965721.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like [Takifugu
rubripes]
Length = 918
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCIDLL + A LGFTYE+ V DGK+G+Q++
Sbjct: 462 GFCIDLLKELAGILGFTYEIRLVPDGKYGSQDE 494
>gi|291239889|ref|XP_002739854.1| PREDICTED: N-methyl-D-aspartate receptor subunit 2A-like
[Saccoglossus kowalevskii]
Length = 977
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 21/114 (18%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQG-----VPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
+W+K + +K I W G H+ QG V + L+I +EE P+++ D T CN
Sbjct: 374 TWKKGKIKLKSITWIGQ-HSNRQGHQPSPVLTQKRLRIITVEETPFVRALSLD--TDGCN 430
Query: 87 MNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYEL 140
G++C+ D +D +CC GF +DLL + + L +E
Sbjct: 431 --NGILCKKMNGTYGDFLD-----------RCCGGFAVDLLKELSMTLDNIFEF 471
>gi|222875730|gb|ACM69007.1| ionotropic glutamate receptor subunit NR3B [Xenopus laevis]
Length = 160
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 115 FYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
+ CC G+CIDLL K +E+L F +EL V DGK+G ++
Sbjct: 12 YKTCCYGYCIDLLEKLSEDLQFDFELYIVGDGKYGARK 49
>gi|241620398|ref|XP_002408667.1| glutamate [NMDA] receptor subunit 3A, putative [Ixodes scapularis]
gi|215503026|gb|EEC12520.1| glutamate [NMDA] receptor subunit 3A, putative [Ixodes scapularis]
Length = 1113
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 16/120 (13%)
Query: 43 IVWPGNSHTPPQGVPEKF---HLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDA 99
++WP G P F ++ AP++ M+ G C GV C A
Sbjct: 417 VLWPSTGEPTLMG-PRPFGQPRFRVVTAYAAPFV-MAATRLRNGSCLT--GVPCLQVSTA 472
Query: 100 DMDKIDVAMAHHNES---------FYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
D++ AH++ + CC+G IDLL A +L F ++L V DG +GT
Sbjct: 473 ISDELAALFAHYHRTGGHTRHPGYNVTCCAGIAIDLLKSLARDLSFDFDLYLVADGSFGT 532
>gi|268579931|ref|XP_002644948.1| C. briggsae CBR-GLR-6 protein [Caenorhabditis briggsae]
Length = 844
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 58/144 (40%), Gaps = 36/144 (25%)
Query: 12 EIELFHPTIFTSGICIGVWKS-WE-KEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEE 69
E+ ++ I +G+ G WKS WE + L + PG V E LK+T + E
Sbjct: 359 ELHIWEMGITGAGLHTGTWKSTWEGSKELTMLAKNIPGTHEHYQASVRESRTLKVTSIHE 418
Query: 70 APYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGK 129
PY VI ++ D + GFC+DLL K
Sbjct: 419 KPY------------------VIEKIMPDGRVKH----------------EGFCVDLLDK 444
Query: 130 FAEELGFTYELVRVEDGKWGTQED 153
AE L F Y L V+D K+G +++
Sbjct: 445 LAEMLHFNYTLKIVKDNKYGERKN 468
>gi|308510977|ref|XP_003117671.1| CRE-GLR-6 protein [Caenorhabditis remanei]
gi|308238317|gb|EFO82269.1| CRE-GLR-6 protein [Caenorhabditis remanei]
Length = 844
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 58/144 (40%), Gaps = 36/144 (25%)
Query: 12 EIELFHPTIFTSGICIGVWKS-WE-KEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEE 69
E+ ++ I +G+ G WKS WE + L + PG V E LK+T + E
Sbjct: 359 ELHIWEMGITGAGLHTGTWKSTWEGSKELTMLAKNIPGTHEHYQASVRESRTLKVTSIHE 418
Query: 70 APYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGK 129
PY VI ++ D + GFC+DLL K
Sbjct: 419 KPY------------------VIEKIMPDGRVKH----------------EGFCVDLLDK 444
Query: 130 FAEELGFTYELVRVEDGKWGTQED 153
AE L F Y L V+D K+G +++
Sbjct: 445 LAEMLHFNYTLKIVKDNKYGERKN 468
>gi|260820461|ref|XP_002605553.1| hypothetical protein BRAFLDRAFT_239807 [Branchiostoma floridae]
gi|229290887|gb|EEN61563.1| hypothetical protein BRAFLDRAFT_239807 [Branchiostoma floridae]
Length = 371
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 107 AMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
M N+ SGFCID+L + A+ LGFTYEL V D K+G E
Sbjct: 19 VMKRENKDGTYKYSGFCIDILNELAKNLGFTYELYEVPDHKFGAPE 64
>gi|341897018|gb|EGT52953.1| CBN-GLR-6 protein [Caenorhabditis brenneri]
Length = 844
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 58/144 (40%), Gaps = 36/144 (25%)
Query: 12 EIELFHPTIFTSGICIGVWKS-WE-KEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEE 69
E+ ++ I +G+ G WKS WE + L + PG V E LK+T + E
Sbjct: 359 ELHIWEMGITGAGLHTGTWKSTWEGSKELTMLAKNIPGTHEHYQASVRESRTLKVTSIHE 418
Query: 70 APYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGK 129
PY VI ++ D + GFC+DLL K
Sbjct: 419 KPY------------------VIEKIMPDGRVKH----------------EGFCVDLLDK 444
Query: 130 FAEELGFTYELVRVEDGKWGTQED 153
AE L F Y L V+D K+G +++
Sbjct: 445 LAEMLHFNYTLKIVKDNKYGERKN 468
>gi|410904635|ref|XP_003965797.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Takifugu
rubripes]
Length = 896
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Query: 110 HHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
+ NE F G+C+DLL + A LGFTYE+ VEDGK+G Q++
Sbjct: 442 YGNERF----EGYCMDLLKELASILGFTYEVHLVEDGKYGYQDE 481
>gi|47215057|emb|CAG03492.1| unnamed protein product [Tetraodon nigroviridis]
Length = 687
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCIDLL + A LGFTYE+ V DGK+G+Q++
Sbjct: 291 GFCIDLLKELAGILGFTYEIRLVPDGKYGSQDE 323
>gi|410932903|ref|XP_003979832.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-2-like,
partial [Takifugu rubripes]
Length = 191
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 117 QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
+CC GFCID+L K A+ + FTY+L V +GK G +
Sbjct: 146 RCCKGFCIDILKKIAKSVKFTYDLYLVTNGKHGKK 180
>gi|348534857|ref|XP_003454918.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like
[Oreochromis niloticus]
Length = 882
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGFT+E+ VEDGK+G Q++
Sbjct: 435 GYCIDLLRELANILGFTFEVRLVEDGKYGVQDE 467
>gi|301625419|ref|XP_002941901.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like, partial
[Xenopus (Silurana) tropicalis]
Length = 775
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL K ++ LGF YE+ VEDGK+G ++D
Sbjct: 466 GYCIDLLEKLSKILGFEYEVRLVEDGKYGAKDD 498
>gi|260810835|ref|XP_002600128.1| hypothetical protein BRAFLDRAFT_186528 [Branchiostoma floridae]
gi|229285414|gb|EEN56140.1| hypothetical protein BRAFLDRAFT_186528 [Branchiostoma floridae]
Length = 255
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 107 AMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
M N+ SGFCID+L + A+ LGFTYEL V D K+G E
Sbjct: 6 VMKRENKDGTYKYSGFCIDILNELAKNLGFTYELYEVPDHKFGAPE 51
>gi|326674615|ref|XP_002664816.2| PREDICTED: glutamate receptor, ionotropic kainate 3-like [Danio
rerio]
Length = 893
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCIDLL + A LGF+YE+ V DGK+G Q+D
Sbjct: 435 GFCIDLLKELASILGFSYEIHLVPDGKYGFQDD 467
>gi|326671257|ref|XP_001924038.3| PREDICTED: glutamate receptor, ionotropic kainate 1 [Danio rerio]
Length = 904
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 37/127 (29%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
IGVW S+ GL++ +I ++ + + L +T + E PY+ D V
Sbjct: 405 IGVWNSYT--GLNLTEI---KDNKNITDSLANR-TLIVTTILENPYVMYKKSDKVL---- 454
Query: 87 MNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDG 146
+ N+ F G+C+DLL + + LGFTYE+ V DG
Sbjct: 455 -----------------------YGNDRF----EGYCLDLLKELSNILGFTYEVKLVTDG 487
Query: 147 KWGTQED 153
K+G Q D
Sbjct: 488 KYGAQND 494
>gi|229577380|ref|NP_001153158.1| glutamate receptor, ionotropic, kainate 2 [Xenopus laevis]
gi|222875744|gb|ACM69014.1| ionotropic glutamate receptor subunit GluR6(Q) [Xenopus laevis]
Length = 908
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL K + LGF YE+ VEDGK+G ++D
Sbjct: 461 GYCIDLLEKLSRILGFEYEVRLVEDGKYGAKDD 493
>gi|449273128|gb|EMC82736.1| Glutamate receptor, ionotropic kainate 3, partial [Columba livia]
Length = 894
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q++
Sbjct: 429 GYCIDLLKELAIILGFSYEIRLVEDGKYGAQDE 461
>gi|47221075|emb|CAG12769.1| unnamed protein product [Tetraodon nigroviridis]
Length = 653
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 40/139 (28%)
Query: 19 TIFTSGIC---IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQM 75
++ TS C IGVW S + GL++ + +S T L +T + E PY+
Sbjct: 163 SLVTSSFCPPQIGVWNS--QTGLNLTET--NKDSSTNVTDSMANRTLIVTTILENPYVMY 218
Query: 76 SPPD-PVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEEL 134
D P+ G N+ F G+C+DLL + + L
Sbjct: 219 KKSDKPLYG----------------------------NDRF----EGYCLDLLKELSNIL 246
Query: 135 GFTYELVRVEDGKWGTQED 153
GF+YE+ V DGK+G Q D
Sbjct: 247 GFSYEVKLVSDGKYGAQND 265
>gi|348525362|ref|XP_003450191.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like
[Oreochromis niloticus]
Length = 869
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 37/128 (28%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVTGKC 85
IGVW S + GL++ +I +S T L +T + E PY+ D P+ G
Sbjct: 406 IGVWNS--QTGLNLTEI--NKDSSTNVTDSMANRTLIVTTILENPYVMYKKSDKPLYG-- 459
Query: 86 NMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVED 145
N+ F G+C+DLL + + LGF+YE+ V D
Sbjct: 460 --------------------------NDRF----EGYCLDLLKELSNILGFSYEVKLVSD 489
Query: 146 GKWGTQED 153
GK+G Q D
Sbjct: 490 GKYGAQND 497
>gi|449489057|ref|XP_002195325.2| PREDICTED: glutamate receptor, ionotropic kainate 3-like
[Taeniopygia guttata]
Length = 1033
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q++
Sbjct: 578 GYCIDLLKELAIILGFSYEIRLVEDGKYGAQDE 610
>gi|345321400|ref|XP_001519062.2| PREDICTED: glutamate receptor, ionotropic kainate 1-like, partial
[Ornithorhynchus anatinus]
Length = 532
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGFTYE+ V DGK+G Q D
Sbjct: 463 GYCLDLLKELSNILGFTYEVKLVSDGKYGAQND 495
>gi|327284441|ref|XP_003226946.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like [Anolis
carolinensis]
Length = 897
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + A LGF+YE+ V+DGK+G Q++
Sbjct: 442 GYCVDLLAEVARILGFSYEIRLVDDGKYGAQDE 474
>gi|410910342|ref|XP_003968649.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like [Takifugu
rubripes]
Length = 855
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 53/128 (41%), Gaps = 37/128 (28%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVTGKC 85
IGVW S + GL++ D +S T L +T + E PY+ D P+ G
Sbjct: 392 IGVWNS--QTGLNLTDT--NKDSSTNVTDSMANRTLIVTTILENPYVMYKKSDKPLYG-- 445
Query: 86 NMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVED 145
N+ F G+C+DLL + + LGF+YE+ V D
Sbjct: 446 --------------------------NDRF----EGYCLDLLKELSNILGFSYEVKLVSD 475
Query: 146 GKWGTQED 153
GK+G Q D
Sbjct: 476 GKYGAQND 483
>gi|209154236|gb|ACI33350.1| Probable glutamate receptor precursor [Salmo salar]
Length = 461
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 27/33 (81%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A++LGF YE+ V+DGK+G Q++
Sbjct: 46 GYCIDLLAEIAKKLGFKYEVHLVKDGKYGRQDE 78
>gi|260815765|ref|XP_002602643.1| hypothetical protein BRAFLDRAFT_81924 [Branchiostoma floridae]
gi|229287954|gb|EEN58655.1| hypothetical protein BRAFLDRAFT_81924 [Branchiostoma floridae]
Length = 743
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 118 CCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
CC+GFCIDLL + A ++ F+Y+L V D K G E
Sbjct: 614 CCTGFCIDLLKELARDVMFSYDLYLVPDNKHGKYE 648
>gi|222875720|gb|ACM69002.1| ionotropic glutamate receptor subunit GluR6 [Xenopus laevis]
Length = 154
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL K + LGF YE+ VEDGK+G ++D
Sbjct: 99 GYCIDLLEKLSRILGFEYEVRLVEDGKYGAKDD 131
>gi|410915846|ref|XP_003971398.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like [Takifugu
rubripes]
Length = 971
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGFTYE+ V DGK+G Q D
Sbjct: 448 GYCLDLLKELSNILGFTYEVRLVADGKYGAQND 480
>gi|348518830|ref|XP_003446934.1| PREDICTED: glutamate receptor, ionotropic kainate 1 [Oreochromis
niloticus]
Length = 897
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGFTYE+ V DGK+G Q D
Sbjct: 450 GYCLDLLKELSNILGFTYEVRLVADGKYGAQND 482
>gi|47227095|emb|CAG00457.1| unnamed protein product [Tetraodon nigroviridis]
Length = 707
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGFTYE+ V DGK+G Q D
Sbjct: 203 GYCLDLLKELSNILGFTYEVRLVADGKYGAQND 235
>gi|326674584|ref|XP_683795.5| PREDICTED: glutamate receptor, ionotropic kainate 2 [Danio rerio]
Length = 898
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + A LGF YEL VEDG++G Q++
Sbjct: 451 GYCVDLLRELAAILGFGYELRLVEDGRYGAQDE 483
>gi|291228276|ref|XP_002734105.1| PREDICTED: glutamate receptor, ionotropic, N-methyl D-aspartate
3A-like [Saccoglossus kowalevskii]
Length = 743
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 18/133 (13%)
Query: 36 EGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKC---NMNRGVI 92
+ L+I I+WPG + P E+ L++ + E P++ +S + + +C + G+
Sbjct: 2 DDLNINSILWPGQTEIMPNLASERRKLRVVTILEEPFLFISELEGDSRECYSGGLCLGLS 61
Query: 93 CRVAGDADMDKIDVAMAHHNESF---------------YQCCSGFCIDLLGKFAEELGFT 137
+G K + H S CC+G D+L + ++ F
Sbjct: 62 LHPSGARTTRKDVIDAFEHWRSHGTFSNNMTDDMPRYAEYCCTGMAYDVLEMLSRDMNFD 121
Query: 138 YELVRVEDGKWGT 150
Y+L V DG +G+
Sbjct: 122 YDLYIVADGNFGS 134
>gi|380020734|ref|XP_003694234.1| PREDICTED: uncharacterized protein LOC100871338 [Apis florea]
Length = 1331
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 57/133 (42%), Gaps = 34/133 (25%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPP---QGVPEKFHLKITFLEEAPYIQMSPPDPVTG 83
+G K ++ LD I+WPG P QG EK + + + A ++PP T
Sbjct: 470 VGTVKGGKEVHLDT--IIWPGGGIVPAYLEQG-GEKIGMPMYRIVTA----LAPP--FTM 520
Query: 84 KCNMN-----RGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTY 138
N+ RGV CR E+ CC G +DL+ + ELGF Y
Sbjct: 521 VTNLQEGLCLRGVFCR-----------------QENTLMCCYGLSMDLMSLVSRELGFRY 563
Query: 139 ELVRVEDGKWGTQ 151
+L V+DG +G +
Sbjct: 564 DLYLVKDGLFGKR 576
>gi|328784796|ref|XP_624931.3| PREDICTED: hypothetical protein LOC552552 [Apis mellifera]
Length = 1352
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 57/133 (42%), Gaps = 34/133 (25%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPP---QGVPEKFHLKITFLEEAPYIQMSPPDPVTG 83
+G K ++ LD I+WPG P QG EK + + + A ++PP T
Sbjct: 491 VGTVKGGKEVHLDT--IIWPGGGIVPAYLEQG-GEKIGMPMYRIVTA----LAPP--FTM 541
Query: 84 KCNMN-----RGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTY 138
N+ RGV CR E+ CC G +DL+ + ELGF Y
Sbjct: 542 VTNLQEGLCLRGVFCR-----------------QENTLMCCYGLSMDLMSLVSRELGFRY 584
Query: 139 ELVRVEDGKWGTQ 151
+L V+DG +G +
Sbjct: 585 DLYLVKDGLFGKR 597
>gi|260813880|ref|XP_002601644.1| hypothetical protein BRAFLDRAFT_85778 [Branchiostoma floridae]
gi|229286943|gb|EEN57656.1| hypothetical protein BRAFLDRAFT_85778 [Branchiostoma floridae]
Length = 920
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 98 DADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
+ DMD+ V + N+ FY GFC+DLL + ++LGF YE+ VED +G ++
Sbjct: 424 EKDMDEHGVKLIG-NDRFY----GFCVDLLKRLGDDLGFRYEIYVVEDNTFGMKD 473
>gi|301619637|ref|XP_002939193.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like [Xenopus
(Silurana) tropicalis]
Length = 926
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGFTYE+ V DGK+G Q D
Sbjct: 485 GYCLDLLKELSNILGFTYEVRLVVDGKYGAQND 517
>gi|326674427|ref|XP_690040.4| PREDICTED: glutamate receptor, ionotropic kainate 1-like [Danio
rerio]
Length = 879
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 37/128 (28%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVTGKC 85
IGVW S GL++ D N++ L +T + E PY+ D P+ G
Sbjct: 416 IGVWNS--NTGLNLTDSNKDKNTNVTDSMANRT--LIVTTILENPYVMYKKSDKPLYG-- 469
Query: 86 NMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVED 145
N+ F G+C+DLL + + LGF+YE+ V D
Sbjct: 470 --------------------------NDRF----EGYCLDLLKELSNILGFSYEVKLVTD 499
Query: 146 GKWGTQED 153
GK+G Q D
Sbjct: 500 GKYGAQND 507
>gi|260784242|ref|XP_002587177.1| hypothetical protein BRAFLDRAFT_128813 [Branchiostoma floridae]
gi|229272316|gb|EEN43188.1| hypothetical protein BRAFLDRAFT_128813 [Branchiostoma floridae]
Length = 823
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 34/123 (27%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCN 86
+G W S E++ L+I D G++ T + K + T LE+ +Q + + G
Sbjct: 352 LGTWNSGERQALNITDRSLAGSNVT--NSLRNKTLIVTTILEKPYVMQKRSDEELLG--- 406
Query: 87 MNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDG 146
N+ F GFCIDLL + A LGF YE+ V DG
Sbjct: 407 -------------------------NDRF----EGFCIDLLNEIAAILGFKYEIYLVPDG 437
Query: 147 KWG 149
++G
Sbjct: 438 QYG 440
>gi|17566612|ref|NP_505244.1| Protein GLR-5 [Caenorhabditis elegans]
gi|351018198|emb|CCD62097.1| Protein GLR-5 [Caenorhabditis elegans]
Length = 932
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
GFCIDLL + +++LGFTY + V+DGK+G +
Sbjct: 467 GFCIDLLAELSKDLGFTYTIHAVKDGKYGNDK 498
>gi|341874849|gb|EGT30784.1| CBN-GLR-5 protein [Caenorhabditis brenneri]
Length = 927
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
GFCIDLL + +++LGFTY + V+DGK+G +
Sbjct: 462 GFCIDLLAELSKDLGFTYTIHAVKDGKYGNDK 493
>gi|268554746|ref|XP_002635360.1| C. briggsae CBR-GLR-5 protein [Caenorhabditis briggsae]
Length = 930
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
GFCIDLL + +++LGFTY + V+DGK+G +
Sbjct: 465 GFCIDLLAELSKDLGFTYTIHAVKDGKYGNDK 496
>gi|357615043|gb|EHJ69440.1| hypothetical protein KGM_00270 [Danaus plexippus]
Length = 1500
Score = 43.1 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 54/134 (40%), Gaps = 29/134 (21%)
Query: 43 IVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDA 99
IVWPG +H G F + +T L AP M G+C RG+ C +
Sbjct: 654 IVWPGGRLVAHGQSSGARTIFRI-VTAL--APPFVMEGELDEDGQCL--RGLPCHRPQTS 708
Query: 100 DMDKIDVAMA-------HHNESFY--------------QCCSGFCIDLLGKFAEELGFTY 138
D D + + F+ CC GF +DLL AEEL F +
Sbjct: 709 DRDNLTLVFNELERDSDQTTTDFFFPTPKPSTIWKMATHCCYGFAMDLLENIAEELEFDF 768
Query: 139 ELVRVEDGKWGTQE 152
L V+DG +G+++
Sbjct: 769 HLYIVDDGLYGSRK 782
>gi|308506097|ref|XP_003115231.1| CRE-GLR-5 protein [Caenorhabditis remanei]
gi|308255766|gb|EFO99718.1| CRE-GLR-5 protein [Caenorhabditis remanei]
Length = 1023
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
GFCIDLL + +++LGFTY + V+DGK+G +
Sbjct: 558 GFCIDLLAELSKDLGFTYTIHAVKDGKYGNDK 589
>gi|432896634|ref|XP_004076357.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like [Oryzias
latipes]
Length = 842
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGFTYE+ V DGK+G Q D
Sbjct: 409 GYCMDLLKELSNILGFTYEVRLVGDGKYGAQND 441
>gi|222875718|gb|ACM69001.1| ionotropic glutamate receptor subunit GluR5 [Xenopus laevis]
Length = 180
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGFTYE+ V DGK+G Q D
Sbjct: 145 GYCLDLLKELSNILGFTYEVRLVVDGKYGAQND 177
>gi|12658340|gb|AAK01097.1|AF318609_1 ionotropic glutamate receptor GLR-5 [Caenorhabditis elegans]
Length = 425
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
GFCIDLL + +++LGFTY + V+DGK+G +
Sbjct: 27 GFCIDLLAELSKDLGFTYTIHAVKDGKYGNDK 58
>gi|431908798|gb|ELK12390.1| Glutamate [NMDA] receptor subunit epsilon-3 [Pteropus alecto]
Length = 994
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 118 CCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CC GFCID+L K A+ + F+Y+L V +GK G +
Sbjct: 351 CCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKR 384
>gi|444727859|gb|ELW68337.1| Glutamate [NMDA] receptor subunit epsilon-3 [Tupaia chinensis]
Length = 1087
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 118 CCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CC GFCID+L K A+ + F+Y+L V +GK G +
Sbjct: 386 CCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKR 419
>gi|118404842|ref|NP_001072565.1| glutamate receptor, ionotropic, kainate 5 precursor [Xenopus
(Silurana) tropicalis]
gi|114107597|gb|AAI22906.1| glutamate receptor KA2 [Xenopus (Silurana) tropicalis]
Length = 479
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
GFCIDLL + A+ LGF Y + V+DG++G ++
Sbjct: 63 GFCIDLLSELAQSLGFNYTIKEVKDGRYGAKD 94
>gi|383864123|ref|XP_003707529.1| PREDICTED: uncharacterized protein LOC100880472 [Megachile
rotundata]
Length = 1355
Score = 42.7 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 30/131 (22%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPP---QGVPEKFHL---KITFLEEAPYIQMSPPDP 80
+G K ++ LD I+WPG P QG EK + +I +P+ ++ +
Sbjct: 493 VGTVKGGKEVHLDT--IIWPGGGIVPAYLEQG-GEKIGMPMYRIVTALASPFTMVT--NL 547
Query: 81 VTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYEL 140
G C RG+ CR E+ CC G +DLL + ELGF Y+L
Sbjct: 548 QEGLCL--RGLFCR-----------------QENILMCCYGLSMDLLSLVSRELGFRYDL 588
Query: 141 VRVEDGKWGTQ 151
V+DG +G +
Sbjct: 589 YLVKDGLFGKR 599
>gi|3287854|sp|Q91756.1|GLRK_XENLA RecName: Full=Glutamate receptor U1; AltName: Full=Kainate-binding
protein; AltName: Full=Unitary non-NMDA glutamate
receptor subunit 1; AltName: Full=XENU1; Flags:
Precursor
gi|1184616|emb|CAA63760.1| glutamate receptor [Xenopus laevis]
gi|67773305|gb|AAY81921.1| kainate binding protein [Xenopus laevis]
gi|213624980|gb|AAI69555.1| Unitary non-NMDA glutamate receptor subunit U1 [Xenopus laevis]
gi|213626514|gb|AAI69557.1| Unitary non-NMDA glutamate receptor subunit U1 [Xenopus laevis]
Length = 479
Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
GFCIDLL + ++ LGF Y + V+DG++G ++
Sbjct: 63 GFCIDLLSELSQSLGFNYTIKEVKDGRYGAKD 94
>gi|9837162|gb|AAG00455.1| glutamate receptor 5 [Devario aequipinnatus]
Length = 880
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 37/128 (28%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVTGKC 85
+GVW S GL++ D N++ L +T + E PY+ D P+ G
Sbjct: 417 VGVWNS--NTGLNLTDSNKDKNTNVTDSMANRT--LIVTTILENPYVMYKKSDKPLYG-- 470
Query: 86 NMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVED 145
N+ F G+C+DLL + + LGF+YE V D
Sbjct: 471 --------------------------NDRF----EGYCLDLLKELSNILGFSYEAKLVSD 500
Query: 146 GKWGTQED 153
GK+G Q D
Sbjct: 501 GKYGAQND 508
>gi|158299360|ref|XP_319463.4| AGAP010272-PA [Anopheles gambiae str. PEST]
gi|157014327|gb|EAA13931.5| AGAP010272-PA [Anopheles gambiae str. PEST]
Length = 914
Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL K AE + F YE+ VEDGK+G +
Sbjct: 427 GYCIDLLNKIAEIVEFDYEIREVEDGKFGNMNE 459
>gi|241843898|ref|XP_002415471.1| EAA5, putative [Ixodes scapularis]
gi|215509683|gb|EEC19136.1| EAA5, putative [Ixodes scapularis]
Length = 808
Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 32/90 (35%)
Query: 62 LKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSG 121
L++T +E PY+ M +TG D+ D G
Sbjct: 326 LRVTTIESRPYVMMKDNKNLTGN-----------------DRFD---------------G 353
Query: 122 FCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
FCIDLL A+ LGF YEL V D K+G +
Sbjct: 354 FCIDLLRTIADLLGFNYELYLVPDKKFGVE 383
>gi|350402194|ref|XP_003486400.1| PREDICTED: hypothetical protein LOC100740405 [Bombus impatiens]
Length = 1348
Score = 42.0 bits (97), Expect = 0.073, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 34/133 (25%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPP---QGVPEKFHLKITFLEEAPYIQMSPPDPVTG 83
+G K ++ LD I+WPG P QG EK + + + A ++PP T
Sbjct: 491 VGTVKGGKEVHLDT--IIWPGGGIVPAYLEQG-GEKIGMPMYRIVTA----LAPP--FTM 541
Query: 84 KCNMN-----RGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTY 138
N+ RG+ CR E+ CC G +DL+ + ELGF Y
Sbjct: 542 VTNLQEGLCLRGLFCR-----------------QENTLMCCYGLSMDLMSLVSRELGFRY 584
Query: 139 ELVRVEDGKWGTQ 151
+L V+DG +G +
Sbjct: 585 DLYLVKDGLFGKR 597
>gi|340726748|ref|XP_003401715.1| PREDICTED: hypothetical protein LOC100642588 [Bombus terrestris]
Length = 1348
Score = 42.0 bits (97), Expect = 0.073, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 34/133 (25%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPP---QGVPEKFHLKITFLEEAPYIQMSPPDPVTG 83
+G K ++ LD I+WPG P QG EK + + + A ++PP T
Sbjct: 491 VGTVKGGKEVHLDT--IIWPGGGIVPAYLEQG-GEKIGMPMYRIVTA----LAPP--FTM 541
Query: 84 KCNMN-----RGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTY 138
N+ RG+ CR E+ CC G +DL+ + ELGF Y
Sbjct: 542 VTNLQEGLCLRGLFCR-----------------QENTLMCCYGLSMDLMSLVSRELGFRY 584
Query: 139 ELVRVEDGKWGTQ 151
+L V+DG +G +
Sbjct: 585 DLYLVKDGLFGKR 597
>gi|449283827|gb|EMC90421.1| Glutamate receptor, ionotropic kainate 1, partial [Columba livia]
Length = 881
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF YE+ V DGK+G Q D
Sbjct: 438 GYCLDLLKELSNILGFIYEVKLVSDGKYGAQND 470
>gi|332022948|gb|EGI63214.1| Glutamate [NMDA] receptor subunit 3A [Acromyrmex echinatior]
Length = 1362
Score = 42.0 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 55/134 (41%), Gaps = 32/134 (23%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPP---QGVPEKFHLKITFLEEAPYIQMSPPDPVT- 82
+G K + LD I+WPG P QG EK + I + +Q SP +T
Sbjct: 495 VGTIKGGREVRLDT--IIWPGGGIMPAYLEQG-GEKVGMPIYSIVT---VQASPFTMITN 548
Query: 83 ---GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYE 139
G C RG+ CR G M CC G +DLL A ELGF +
Sbjct: 549 LQEGFCL--RGLTCR-QGKTVM----------------CCYGLSMDLLSLVARELGFRFN 589
Query: 140 LVRVEDGKWGTQED 153
L EDG +G Q +
Sbjct: 590 LYLAEDGLFGKQNN 603
>gi|405963474|gb|EKC29043.1| Glutamate [NMDA] receptor subunit epsilon-2 [Crassostrea gigas]
Length = 900
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 31 KSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQ 74
K+ K +++ I WPGNS PP G PEK +I L+E PY+
Sbjct: 299 KNKAKMMVEMSGITWPGNSILPPLGKPEKRFFRIVTLKEQPYVN 342
>gi|260791962|ref|XP_002590996.1| hypothetical protein BRAFLDRAFT_119091 [Branchiostoma floridae]
gi|229276196|gb|EEN47007.1| hypothetical protein BRAFLDRAFT_119091 [Branchiostoma floridae]
Length = 1179
Score = 42.0 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWG 149
GFC+DLL + ELGFTY L V DG++G
Sbjct: 763 GFCMDLLAWLSSELGFTYSLYAVSDGEYG 791
>gi|363728639|ref|XP_416697.3| PREDICTED: glutamate receptor, ionotropic kainate 1, partial
[Gallus gallus]
Length = 916
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF YE+ V DGK+G Q D
Sbjct: 475 GYCLDLLKELSNILGFIYEVKLVSDGKYGAQND 507
>gi|354500309|ref|XP_003512243.1| PREDICTED: glutamate [NMDA] receptor subunit epsilon-4-like
[Cricetulus griseus]
Length = 584
Score = 42.0 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 234 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 291
Query: 92 ICR 94
CR
Sbjct: 292 PCR 294
>gi|326666384|ref|XP_003198258.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Danio
rerio]
Length = 446
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 110 HHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
+ NE F GFC+DLL + + LGF YE+ VEDGK+G E+
Sbjct: 10 YGNERF----EGFCVDLLRELSGILGFRYEIRLVEDGKYGAFEE 49
>gi|354466196|ref|XP_003495560.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 1
[Cricetulus griseus]
Length = 905
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 110 HHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
H N+ F G+C+DLL + + LGF Y++ V DGK+G Q+D
Sbjct: 455 HGNDRF----EGYCLDLLKELSNILGFLYDVRLVPDGKYGAQDD 494
>gi|348541641|ref|XP_003458295.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like
[Oreochromis niloticus]
Length = 913
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGF YEL VEDGK+G ++
Sbjct: 466 GYCIDLLRELSSILGFRYELRLVEDGKYGALDE 498
>gi|344245335|gb|EGW01439.1| Glutamate receptor, ionotropic kainate 1 [Cricetulus griseus]
Length = 778
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 110 HHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
H N+ F G+C+DLL + + LGF Y++ V DGK+G Q+D
Sbjct: 368 HGNDRF----EGYCLDLLKELSNILGFLYDVRLVPDGKYGAQDD 407
>gi|449485622|ref|XP_004175688.1| PREDICTED: glutamate receptor, ionotropic kainate 1 [Taeniopygia
guttata]
Length = 823
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF YE+ V DGK+G Q D
Sbjct: 380 GYCLDLLKELSNILGFIYEVKLVSDGKYGAQND 412
>gi|380806685|gb|AFE75218.1| glutamate [NMDA] receptor subunit epsilon-3 precursor, partial
[Macaca mulatta]
Length = 135
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 118 CCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 10 CCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 43
>gi|327268615|ref|XP_003219092.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like [Anolis
carolinensis]
Length = 911
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF YE+ V DGK+G Q D
Sbjct: 470 GYCLDLLKELSNILGFIYEVKLVSDGKYGAQND 502
>gi|354466204|ref|XP_003495564.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 5
[Cricetulus griseus]
Length = 920
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 110 HHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
H N+ F G+C+DLL + + LGF Y++ V DGK+G Q+D
Sbjct: 470 HGNDRF----EGYCLDLLKELSNILGFLYDVRLVPDGKYGAQDD 509
>gi|332020491|gb|EGI60906.1| Glutamate receptor, ionotropic kainate 2 [Acromyrmex echinatior]
Length = 676
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 10/52 (19%)
Query: 107 AMAHH------NESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
M HH N FY GFC+DLL A E+GF+Y L V D K+G ++
Sbjct: 71 VMMHHEKNYTGNSRFY----GFCMDLLAAVAREVGFSYRLELVPDRKYGARD 118
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
GFCIDLL K A + FTY + V DGK+G +
Sbjct: 155 GFCIDLLKKIAHMVDFTYRIELVPDGKYGVYD 186
>gi|354466200|ref|XP_003495562.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 3
[Cricetulus griseus]
Length = 918
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 110 HHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
H N+ F G+C+DLL + + LGF Y++ V DGK+G Q+D
Sbjct: 470 HGNDRF----EGYCLDLLKELSNILGFLYDVRLVPDGKYGAQDD 509
>gi|354466198|ref|XP_003495561.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 2
[Cricetulus griseus]
Length = 934
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 110 HHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
H N+ F G+C+DLL + + LGF Y++ V DGK+G Q+D
Sbjct: 455 HGNDRF----EGYCLDLLKELSNILGFLYDVRLVPDGKYGAQDD 494
>gi|260806575|ref|XP_002598159.1| hypothetical protein BRAFLDRAFT_82944 [Branchiostoma floridae]
gi|229283431|gb|EEN54171.1| hypothetical protein BRAFLDRAFT_82944 [Branchiostoma floridae]
Length = 1116
Score = 41.6 bits (96), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 31/129 (24%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFH---LKITFLEEAPYIQMSPPDPVTG 83
+G W + +++ + G + P+ LK+ +EE+P++ M D
Sbjct: 557 VGRWDEARGLSMPTRNVTFMGMAEPVPEDYRTDLRNRTLKVVTIEESPFMIMRDQD---- 612
Query: 84 KCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
++G R N+ F SGFC+DLL ++ +GF Y+L V
Sbjct: 613 ----DQGRTLR----------------GNDRF----SGFCVDLLDWMSQGMGFRYDLYHV 648
Query: 144 EDGKWGTQE 152
D WG ++
Sbjct: 649 ADNNWGAKD 657
>gi|354466202|ref|XP_003495563.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 4
[Cricetulus griseus]
Length = 949
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 110 HHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
H N+ F G+C+DLL + + LGF Y++ V DGK+G Q+D
Sbjct: 470 HGNDRF----EGYCLDLLKELSNILGFLYDVRLVPDGKYGAQDD 509
>gi|326913222|ref|XP_003202939.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like [Meleagris
gallopavo]
Length = 1025
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF YE+ V DGK+G Q D
Sbjct: 582 GYCLDLLKELSNILGFIYEVKLVSDGKYGAQND 614
>gi|148229256|ref|NP_001079229.1| putative glutamate receptor subunit U1a precursor [Xenopus laevis]
gi|18448653|gb|AAL69894.1|AF441126_1 putative glutamate receptor subunit U1a [Xenopus laevis]
Length = 479
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCIDLL + ++ LGF Y + V+DG++G ++
Sbjct: 63 GFCIDLLSELSQSLGFNYTIREVKDGRYGAKDQ 95
>gi|260818071|ref|XP_002603908.1| hypothetical protein BRAFLDRAFT_105949 [Branchiostoma floridae]
gi|229289232|gb|EEN59919.1| hypothetical protein BRAFLDRAFT_105949 [Branchiostoma floridae]
Length = 1227
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 117 QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
QCC G +DL+ A +LG YEL V D K+G+
Sbjct: 490 QCCEGLVVDLMEAIATDLGLEYELYHVADSKYGS 523
>gi|47224664|emb|CAG03648.1| unnamed protein product [Tetraodon nigroviridis]
Length = 607
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGF YEL VEDGK+G ++
Sbjct: 160 GYCIDLLRELSSILGFRYELRLVEDGKYGALDE 192
>gi|383865951|ref|XP_003708435.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Megachile
rotundata]
Length = 957
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 112 NESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
N FY GFC+DLL A E+GFTY L V D K+G ++
Sbjct: 435 NARFY----GFCVDLLEAVAREVGFTYRLELVPDRKYGAKD 471
>gi|354459070|ref|NP_001081086.2| glutamate receptor U1 [Xenopus laevis]
Length = 510
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCIDLL + ++ LGF Y + V+DG++G ++
Sbjct: 94 GFCIDLLSELSQSLGFNYTIKEVKDGRYGAKDQ 126
>gi|405956903|gb|EKC23146.1| Glutamate receptor 4 [Crassostrea gigas]
Length = 777
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 17/121 (14%)
Query: 34 EKEGLDIKDI-VWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
E EGLD + VW +S++ + +K H EE + + P+ G+ V+
Sbjct: 313 EIEGLDSLQVGVWRSHSNS----LEDKIHF-----EEVKRLNRNYSFPLKGRT---VSVV 360
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
+ M K D N+ F GF +DL+ + A+ L F +E+ V DGK+GT++
Sbjct: 361 MILEKPFTMQKRDYMQRLGNDRF----EGFAVDLITEVAKMLDFNFEIYLVHDGKFGTKK 416
Query: 153 D 153
+
Sbjct: 417 E 417
>gi|47209848|emb|CAF88978.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1093
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 63 KITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGF 122
K+ ++++P + P+ TG N V + G M K + M N+ F G+
Sbjct: 482 KLVLIQDSPLL----PNDTTGLENRTVVVTTIMEGPYVMLKKNWEMYEGNDQF----EGY 533
Query: 123 CIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
C+DL + A+ +G Y++ V DGK+G ++
Sbjct: 534 CVDLAAEIAKHIGIKYKISIVPDGKYGARD 563
>gi|241165968|ref|XP_002409757.1| ionotropic glutamate receptor, putative [Ixodes scapularis]
gi|215494628|gb|EEC04269.1| ionotropic glutamate receptor, putative [Ixodes scapularis]
Length = 184
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 31/91 (34%)
Query: 62 LKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSG 121
KIT L APY+ + P R++G+ D+ + G
Sbjct: 110 FKITTLINAPYVMLKKSAP-------------RLSGN---DRFE---------------G 138
Query: 122 FCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
FC+DL+ + + LGF Y+L V DG +GT+
Sbjct: 139 FCVDLVREMSRLLGFRYQLRLVRDGSYGTRN 169
>gi|324517707|gb|ADY46895.1| Glutamate receptor, ionotropic kainate 2, partial [Ascaris suum]
Length = 401
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWG 149
GFC+DLL K AE L F Y L V+DGK+G
Sbjct: 62 GFCVDLLDKLAEYLNFEYTLYIVKDGKYG 90
>gi|156523140|ref|NP_001095984.1| glutamate receptor, ionotropic kainate 1 [Bos taurus]
gi|126010639|gb|AAI33585.1| GRIK1 protein [Bos taurus]
Length = 905
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNKDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFIYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VADGKYGAQND 494
>gi|359062231|ref|XP_003585668.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like [Bos
taurus]
Length = 802
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 418 IGIWNS--NSGLNMTD----GNKDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 470
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 471 G----------------------------NDRF----EGYCLDLLKELSNILGFIYDVKL 498
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 499 VADGKYGAQND 509
>gi|426217183|ref|XP_004002833.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 4 [Ovis
aries]
Length = 920
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 418 IGIWNS--NSGLNMTD----GNKDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 470
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 471 G----------------------------NDRF----EGYCLDLLKELSNILGFIYDVKL 498
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 499 VADGKYGAQND 509
>gi|426217177|ref|XP_004002830.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 1 [Ovis
aries]
Length = 905
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNKDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFIYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VADGKYGAQND 494
>gi|341874448|gb|EGT30383.1| CBN-GLR-7 protein [Caenorhabditis brenneri]
Length = 917
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDL+ E+ FTY + VEDG +GT +D
Sbjct: 430 GYCIDLINMIQVEVNFTYTIYEVEDGSFGTMDD 462
>gi|308495251|ref|XP_003109814.1| CRE-GLR-7 protein [Caenorhabditis remanei]
gi|308246004|gb|EFO89956.1| CRE-GLR-7 protein [Caenorhabditis remanei]
Length = 921
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDL+ E+ FTY + VEDG +GT +D
Sbjct: 434 GYCIDLINMIQVEVNFTYTIYEVEDGSFGTMDD 466
>gi|426217179|ref|XP_004002831.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 2 [Ovis
aries]
Length = 934
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNKDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFIYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VADGKYGAQND 494
>gi|307195598|gb|EFN77448.1| Glutamate receptor, ionotropic kainate 2 [Harpegnathos saltator]
Length = 575
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 112 NESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
N FY GFC+DLL A+E+GF+Y L V D K+G ++
Sbjct: 82 NSRFY----GFCVDLLAAVAKEVGFSYRLELVPDRKYGARD 118
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
GFCIDLL + A +GFTY + V DGK+G +
Sbjct: 155 GFCIDLLKEIARVVGFTYRIELVPDGKYGVYD 186
>gi|432945249|ref|XP_004083506.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Oryzias
latipes]
Length = 911
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGF YEL VEDGK+G ++
Sbjct: 464 GYCIDLLRELSGILGFRYELRLVEDGKYGALDE 496
>gi|291235638|ref|XP_002737751.1| PREDICTED: glutamate receptor, ionotropic, AMPA 2-like
[Saccoglossus kowalevskii]
Length = 912
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 53/126 (42%), Gaps = 37/126 (29%)
Query: 33 WEKEG-LDIKD-IVWPGNSHTPPQGVP---EKFHLKITFLEEAPYIQMSPPDPVTGKCNM 87
W EG ++I + +PGN+ T P + LKIT + + P++ MS D T K N
Sbjct: 415 WYGEGDMEISTRVFFPGNTRTVPTDSNLDLSNYTLKITTILDEPFVMMS--DDPTKKGN- 471
Query: 88 NRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGK 147
D+ GFC DLL K L F YE+ V DG+
Sbjct: 472 --------------DRY---------------KGFCKDLLDKLQSSLDFKYEMTLVPDGQ 502
Query: 148 WGTQED 153
+G +++
Sbjct: 503 YGAKDE 508
>gi|241704138|ref|XP_002413219.1| excitatory amino acid transporter, putative [Ixodes scapularis]
gi|215507033|gb|EEC16527.1| excitatory amino acid transporter, putative [Ixodes scapularis]
Length = 728
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 31/95 (32%)
Query: 58 EKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQ 117
E F LK+T +E PY + P D N+ FY
Sbjct: 388 EGFTLKVTTVETKPYTMVYP---------------------------DSENKTGNDRFY- 419
Query: 118 CCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
G+ IDL+ A+E+GF +E EDGK+G+ +
Sbjct: 420 ---GYAIDLIAMLAKEIGFKHEFYLTEDGKYGSPQ 451
>gi|296491634|tpg|DAA33667.1| TPA: glutamate receptor, ionotropic, kainate 1 [Bos taurus]
Length = 835
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNKDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFIYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VADGKYGAQND 494
>gi|395750083|ref|XP_003780337.1| PREDICTED: LOW QUALITY PROTEIN: glutamate [NMDA] receptor subunit
3B-like, partial [Pongo abelii]
Length = 888
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 99 ADMDKIDVAMAH--HNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
A +D + A+A+ + + C G+CIDLL + AE+ F + L V DGK+G D
Sbjct: 293 ATLDALFTALANALKPPALRKSCYGYCIDLLERLAEDTPFDFXLYIVGDGKYGALRD 349
>gi|193209667|ref|NP_508441.3| Protein GLR-7 [Caenorhabditis elegans]
gi|351059600|emb|CCD67188.1| Protein GLR-7 [Caenorhabditis elegans]
Length = 671
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDL+ E+ FTY + VEDG +GT +D
Sbjct: 183 GYCIDLINMIQVEVNFTYTIYEVEDGSFGTMDD 215
>gi|322792774|gb|EFZ16607.1| hypothetical protein SINV_01575 [Solenopsis invicta]
Length = 1394
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 118 CCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
CC G +DLL A ELGF + L VEDG +G Q +
Sbjct: 567 CCYGLSMDLLTLVARELGFRFNLYLVEDGLFGKQNN 602
>gi|426217181|ref|XP_004002832.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 3 [Ovis
aries]
Length = 918
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 418 IGIWNS--NSGLNMTD----GNKDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 470
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 471 G----------------------------NDRF----EGYCLDLLKELSNILGFIYDVKL 498
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 499 VADGKYGAQND 509
>gi|390339525|ref|XP_784968.3| PREDICTED: glutamate receptor, ionotropic kainate 2-like
[Strongylocentrotus purpuratus]
Length = 903
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCIDLL + + +LGF Y + VEDG +G Q++
Sbjct: 456 GFCIDLLHQLSLKLGFDYRIKLVEDGNYGGQKE 488
>gi|312383219|gb|EFR28389.1| hypothetical protein AND_03803 [Anopheles darlingi]
Length = 215
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL K AE + F YE+ VEDGK+G +
Sbjct: 12 GYCIDLLNKIAEIVEFDYEIREVEDGKFGNMNE 44
>gi|198423774|ref|XP_002122164.1| PREDICTED: similar to glutamate receptor, ionotropic, delta 1
[Ciona intestinalis]
Length = 1006
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 120 SGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
SGF IDLL +E++GF YE+ V D K+GT +D
Sbjct: 511 SGFSIDLLHMLSEKIGFRYEIYEVADRKYGTFKD 544
>gi|156572217|gb|ABU84986.1| ionotropic glutamate receptor subunit NR2B [Xenopus laevis]
Length = 115
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 16 FHPTIFTSGICIGVWKSWEKEG------LDIKDIVWPGNSHTPPQGVPEKFHLKITFLEE 69
HP + I + + WE+ G L +K VWP P + HL I LEE
Sbjct: 11 MHPKLVI--ILLNQERKWERVGKYKDRSLKMKYYVWPVFDLYPNSEEHKDEHLSIVTLEE 68
Query: 70 APYIQMSPPDPVTGKCNMNRGVICR 94
AP++ + DP++G C M V CR
Sbjct: 69 APFVIVEDVDPLSGTC-MRNTVPCR 92
>gi|431915242|gb|ELK15929.1| Glutamate receptor, ionotropic kainate 1 [Pteropus alecto]
Length = 876
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 374 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 426
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 427 G----------------------------NDRF----EGYCLDLLKELSNILGFIYDVKL 454
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 455 VPDGKYGAQND 465
>gi|75766291|pdb|2ANJ|A Chain A, Crystal Structure Of The Glur2 Ligand Binding Core (S1s2j-
Y450w) Mutant In Complex With The Partial Agonist Kainic
Acid At 2.1 A Resolution
Length = 263
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 101 MDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
M K + M NE + G+C+DL + A+ GF Y+L V DGKWG ++
Sbjct: 18 MMKKNHEMLEGNERY----EGYCVDLAAEIAKHCGFKYKLTIVGDGKWGARD 65
>gi|26339462|dbj|BAC33402.1| unnamed protein product [Mus musculus]
gi|148665931|gb|EDK98347.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_e [Mus
musculus]
Length = 589
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VPDGKYGAQND 494
>gi|344277142|ref|XP_003410363.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 1
[Loxodonta africana]
Length = 905
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNKDRSNNISDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFIYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VPDGKYGAQND 494
>gi|47205431|emb|CAF94897.1| unnamed protein product [Tetraodon nigroviridis]
Length = 443
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
GFCIDLL + +E +GF Y L V+DG++G+
Sbjct: 35 GFCIDLLSQLSEIIGFRYTLQLVKDGRYGS 64
>gi|410919937|ref|XP_003973440.1| PREDICTED: glutamate receptor U1-like [Takifugu rubripes]
Length = 459
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFC+DLL + +++LGF Y++ V+DG +G Q++
Sbjct: 47 GFCMDLLSEVSKKLGFKYQVQLVKDGSYGRQDE 79
>gi|149059772|gb|EDM10655.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_i [Rattus
norvegicus]
Length = 598
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 418 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 470
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 471 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 498
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 499 VPDGKYGAQND 509
>gi|26337847|dbj|BAC32609.1| unnamed protein product [Mus musculus]
Length = 598
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 418 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 470
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 471 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 498
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 499 VPDGKYGAQND 509
>gi|395518506|ref|XP_003763401.1| PREDICTED: glutamate receptor, ionotropic kainate 1 [Sarcophilus
harrisii]
Length = 937
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 496 GYCLDLLKELSSILGFIYDVKLVSDGKYGAQND 528
>gi|350592120|ref|XP_003483397.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 2 [Sus
scrofa]
Length = 905
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNKDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFIYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VPDGKYGAQND 494
>gi|301777524|ref|XP_002924182.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 1
[Ailuropoda melanoleuca]
Length = 905
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNKDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFIYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VPDGKYGAQND 494
>gi|149059764|gb|EDM10647.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_a [Rattus
norvegicus]
Length = 833
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VPDGKYGAQND 494
>gi|149059773|gb|EDM10656.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_j [Rattus
norvegicus]
Length = 611
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VPDGKYGAQND 494
>gi|83999995|ref|NP_034478.1| glutamate receptor ionotropic, kainate 1 isoform b precursor [Mus
musculus]
gi|74227392|dbj|BAE21774.1| unnamed protein product [Mus musculus]
Length = 905
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VPDGKYGAQND 494
>gi|198420871|ref|XP_002120626.1| PREDICTED: similar to Glutamate receptor, ionotropic kainate 2
precursor (Glutamate receptor 6) (GluR-6) (GluR6) [Ciona
intestinalis]
Length = 1145
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 109 AHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
+++ +S YQ G+CIDLL +E+L F+Y+LV V D +G +
Sbjct: 504 SNNKDSPYQ---GYCIDLLNLLSEDLKFSYKLVEVADNNYGNE 543
>gi|3287850|sp|Q60934.2|GRIK1_MOUSE RecName: Full=Glutamate receptor ionotropic, kainate 1;
Short=GluK1; AltName: Full=Glutamate receptor 5;
Short=GluR-5; Short=GluR5; Flags: Precursor
Length = 836
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VPDGKYGAQND 494
>gi|410970116|ref|XP_003991535.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor, ionotropic
kainate 1 [Felis catus]
Length = 918
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 418 IGIWNS--NSGLNMTD----GNKDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 470
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 471 G----------------------------NDRF----EGYCLDLLKELSNILGFIYDVKL 498
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 499 VPDGKYGAQND 509
>gi|163659909|ref|NP_001104584.1| glutamate receptor ionotropic, kainate 1 isoform 3 [Rattus
norvegicus]
gi|204390|gb|AAA02874.1| glutamate receptor subunit 5-2 [Rattus norvegicus]
gi|149059768|gb|EDM10651.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_e [Rattus
norvegicus]
Length = 905
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VPDGKYGAQND 494
>gi|189525232|ref|XP_001923977.1| PREDICTED: probable glutamate receptor-like [Danio rerio]
Length = 465
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + A++LGF Y++ V+DG +G Q++
Sbjct: 51 GYCMDLLTELAKKLGFKYKVHLVKDGSYGRQDE 83
>gi|344277144|ref|XP_003410364.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 2
[Loxodonta africana]
Length = 918
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 418 IGIWNS--NSGLNMTD----GNKDRSNNISDSLANRTLIVTTILEE-PYVMYRKSDKPLY 470
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 471 G----------------------------NDRF----EGYCLDLLKELSNILGFIYDVKL 498
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 499 VPDGKYGAQND 509
>gi|426217185|ref|XP_004002834.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 5 [Ovis
aries]
Length = 796
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 353 GYCLDLLKELSNILGFIYDVKLVADGKYGAQND 385
>gi|515481|gb|AAA21578.1| kainate receptor alpha subunit [Carassius auratus]
Length = 459
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCIDLL A++L F Y++ V+DG++G +D
Sbjct: 45 GFCIDLLSAIAKKLDFKYDVKLVKDGRYGKTDD 77
>gi|190336889|gb|AAI62620.1| Glutamate receptor, ionotropic, AMPA 4b [Danio rerio]
Length = 904
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 78 PDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFT 137
P+ +G N V + G M K + M NE + G+C+DL + A+ +GF
Sbjct: 406 PNETSGMENRTVIVTTIMEGPYVMLKKNWEMYEGNEQY----EGYCVDLASEIAKHIGFK 461
Query: 138 YELVRVEDGKWGTQE 152
Y++ V DGK+G ++
Sbjct: 462 YKISIVPDGKYGARD 476
>gi|133777614|gb|AAI23878.1| GRIK1 protein [Bos taurus]
Length = 796
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 353 GYCLDLLKELSNILGFIYDVKLVADGKYGAQND 385
>gi|221307513|ref|NP_001138274.1| si:ch211-251b21.1 precursor [Danio rerio]
Length = 458
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCID+L + +LGF Y++ V+DG++G +D
Sbjct: 45 GFCIDMLSAISNKLGFKYDVHLVKDGRYGKTDD 77
>gi|8393481|ref|NP_058937.1| glutamate receptor ionotropic, kainate 1 isoform 2 [Rattus
norvegicus]
gi|204388|gb|AAA02873.1| glutamate receptor subunit 5-1 [Rattus norvegicus]
gi|149059767|gb|EDM10650.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_d [Rattus
norvegicus]
Length = 920
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 418 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 470
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 471 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 498
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 499 VPDGKYGAQND 509
>gi|149059769|gb|EDM10652.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_f [Rattus
norvegicus]
Length = 871
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 418 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 470
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 471 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 498
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 499 VPDGKYGAQND 509
>gi|148665929|gb|EDK98345.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_c [Mus
musculus]
Length = 598
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 418 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 470
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 471 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 498
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 499 VPDGKYGAQND 509
>gi|410915018|ref|XP_003970984.1| PREDICTED: glutamate receptor 4-like isoform 1 [Takifugu rubripes]
Length = 905
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 63 KITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGF 122
K+ ++++P + P+ TG N V + G M K + M N+ + G+
Sbjct: 396 KLVLIQDSPLL----PNDTTGLENRTVVVTTIMEGPYVMLKKNWEMYEGNDQY----EGY 447
Query: 123 CIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
C+DL + A+ +G Y++ V DGK+G ++
Sbjct: 448 CVDLAAEIAKHIGIKYKISIVPDGKYGARD 477
>gi|410915020|ref|XP_003970985.1| PREDICTED: glutamate receptor 4-like isoform 2 [Takifugu rubripes]
Length = 905
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 63 KITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGF 122
K+ ++++P + P+ TG N V + G M K + M N+ + G+
Sbjct: 396 KLVLIQDSPLL----PNDTTGLENRTVVVTTIMEGPYVMLKKNWEMYEGNDQY----EGY 447
Query: 123 CIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
C+DL + A+ +G Y++ V DGK+G ++
Sbjct: 448 CVDLAAEIAKHIGIKYKISIVPDGKYGARD 477
>gi|350592122|ref|XP_003358953.2| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 1 [Sus
scrofa]
Length = 918
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 418 IGIWNS--NSGLNMTD----GNKDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 470
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 471 G----------------------------NDRF----EGYCLDLLKELSNILGFIYDVKL 498
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 499 VPDGKYGAQND 509
>gi|338720717|ref|XP_001915295.2| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor, ionotropic
kainate 1 [Equus caballus]
Length = 918
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 418 IGIWNS--NSGLNMTD----GNKDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 470
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 471 G----------------------------NDRF----EGYCLDLLKELSNILGFIYDVKL 498
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 499 VPDGKYGAQND 509
>gi|148665930|gb|EDK98346.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_d [Mus
musculus]
Length = 699
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VPDGKYGAQND 494
>gi|301777526|ref|XP_002924183.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 2
[Ailuropoda melanoleuca]
Length = 917
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 418 IGIWNS--NSGLNMTD----GNKDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 470
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 471 G----------------------------NDRF----EGYCLDLLKELSNILGFIYDVKL 498
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 499 VPDGKYGAQND 509
>gi|84000015|ref|NP_666184.2| glutamate receptor ionotropic, kainate 1 isoform a precursor [Mus
musculus]
gi|26335749|dbj|BAC31575.1| unnamed protein product [Mus musculus]
Length = 934
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VPDGKYGAQND 494
>gi|26335229|dbj|BAC31315.1| unnamed protein product [Mus musculus]
Length = 900
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VPDGKYGAQND 494
>gi|260812531|ref|XP_002600974.1| hypothetical protein BRAFLDRAFT_79177 [Branchiostoma floridae]
gi|229286264|gb|EEN56986.1| hypothetical protein BRAFLDRAFT_79177 [Branchiostoma floridae]
Length = 703
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+D+L K AE +GF + + V DGK+G E+
Sbjct: 536 GYCVDMLKKVAELVGFNFTIREVADGKYGANEN 568
>gi|148665932|gb|EDK98348.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_f [Mus
musculus]
Length = 934
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VPDGKYGAQND 494
>gi|443723637|gb|ELU11964.1| hypothetical protein CAPTEDRAFT_165192 [Capitella teleta]
Length = 856
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFC+DLL + A+ +GF YE++ V DG++G ++
Sbjct: 361 GFCVDLLEEIAQIVGFQYEIIIVADGRYGAPDN 393
>gi|149059770|gb|EDM10653.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_g [Rattus
norvegicus]
Length = 903
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VPDGKYGAQND 494
>gi|148665928|gb|EDK98344.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_b [Mus
musculus]
Length = 903
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VPDGKYGAQND 494
>gi|149059771|gb|EDM10654.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_h [Rattus
norvegicus]
Length = 710
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VPDGKYGAQND 494
>gi|163659911|ref|NP_001104587.1| glutamate receptor ionotropic, kainate 1 isoform 1 [Rattus
norvegicus]
gi|149059765|gb|EDM10648.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_b [Rattus
norvegicus]
Length = 949
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 418 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 470
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 471 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 498
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 499 VPDGKYGAQND 509
>gi|380015490|ref|XP_003691734.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like, partial
[Apis florea]
Length = 630
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 112 NESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
N FY GFC+DLL A E+GF+Y L V D K+G ++
Sbjct: 433 NARFY----GFCVDLLEAVAREVGFSYRLELVPDRKYGAKD 469
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
GFCIDLL + A +GF Y++ V DGK+G
Sbjct: 506 GFCIDLLKEIAHMVGFGYKIELVPDGKYGV 535
>gi|149059766|gb|EDM10649.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_c [Rattus
norvegicus]
Length = 934
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VPDGKYGAQND 494
>gi|345795237|ref|XP_544843.3| PREDICTED: glutamate receptor, ionotropic kainate 1 [Canis lupus
familiaris]
Length = 918
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 418 IGIWNS--NSGLNMTD----GNKDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 470
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 471 G----------------------------NDRF----EGYCLDLLKELSNILGFIYDVKL 498
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 499 VPDGKYGAQND 509
>gi|432117586|gb|ELK37824.1| Glutamate receptor, ionotropic kainate 2 [Myotis davidii]
Length = 536
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DG++G Q+D
Sbjct: 64 GYCLDLLKELSSMLGFIYDVRLVPDGRYGAQDD 96
>gi|26335871|dbj|BAC31636.1| unnamed protein product [Mus musculus]
Length = 903
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VPDGKYGAQND 494
>gi|405964690|gb|EKC30143.1| Glutamate [NMDA] receptor subunit 3A [Crassostrea gigas]
Length = 900
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 117 QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
+CC GF +DLL K A +L F Y L V D +G +++
Sbjct: 259 KCCRGFAVDLLNKLASDLEFEYVLYIVHDTTYGKEKN 295
>gi|268530780|ref|XP_002630516.1| C. briggsae CBR-GLR-4 protein [Caenorhabditis briggsae]
Length = 951
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCIDLL + + L F Y ++ V+DG +G ++D
Sbjct: 433 GFCIDLLNEMTKVLKFNYTIIEVQDGTYGIEDD 465
>gi|148665927|gb|EDK98343.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_a [Mus
musculus]
Length = 751
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VPDGKYGAQND 494
>gi|21594363|gb|AAH31822.1| Grik1 protein [Mus musculus]
gi|55777102|gb|AAH49275.1| Grik1 protein [Mus musculus]
Length = 832
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 332 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 384
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 385 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 412
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 413 VPDGKYGAQND 423
>gi|348521684|ref|XP_003448356.1| PREDICTED: probable glutamate receptor-like [Oreochromis niloticus]
Length = 462
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFC+DLL + A+++GF Y++ V+DG +G QE+
Sbjct: 47 GFCMDLLFEVAKKVGFKYKVQLVKDGAYGRQEE 79
>gi|328777598|ref|XP_396444.3| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 1,
partial [Apis mellifera]
Length = 601
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 112 NESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
N FY GFC+DLL A E+GF+Y L V D K+G ++
Sbjct: 433 NARFY----GFCVDLLEAVAREVGFSYRLELVPDRKYGAKD 469
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
GFCIDLL + A +GF Y++ V DGK+G
Sbjct: 506 GFCIDLLKEIAHMVGFGYKIELVPDGKYGV 535
>gi|350422738|ref|XP_003493267.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Bombus
impatiens]
Length = 1031
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 112 NESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
N FY GFC+DLL A E+GF+Y L V D K+G ++
Sbjct: 433 NARFY----GFCVDLLEAVAREVGFSYRLELVPDRKYGAKD 469
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
GFCIDLL + A +GF Y + V DGK+G +
Sbjct: 506 GFCIDLLKEIAHMVGFAYRIELVPDGKYGVYD 537
>gi|426392766|ref|XP_004062711.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 1
[Gorilla gorilla gorilla]
Length = 905
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 462 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 494
>gi|332229401|ref|XP_003263878.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 3
[Nomascus leucogenys]
Length = 905
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 462 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 494
>gi|297707738|ref|XP_002830641.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 3
[Pongo abelii]
Length = 905
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 462 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 494
>gi|109065575|ref|XP_001100677.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 3
[Macaca mulatta]
Length = 905
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 462 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 494
>gi|28416444|ref|NP_783300.1| glutamate receptor ionotropic, kainate 1 isoform 2 precursor [Homo
sapiens]
gi|397484146|ref|XP_003813241.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 3 [Pan
paniscus]
gi|17384609|emb|CAC80546.1| glutamate receptor subunit GluR5 [Homo sapiens]
gi|119630311|gb|EAX09906.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_a [Homo
sapiens]
gi|157169988|gb|AAI52728.1| Glutamate receptor, ionotropic, kainate 1 [synthetic construct]
gi|162319352|gb|AAI56976.1| Glutamate receptor, ionotropic, kainate 1 [synthetic construct]
Length = 905
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 462 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 494
>gi|260787654|ref|XP_002588867.1| hypothetical protein BRAFLDRAFT_89432 [Branchiostoma floridae]
gi|229274038|gb|EEN44878.1| hypothetical protein BRAFLDRAFT_89432 [Branchiostoma floridae]
Length = 761
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 120 SGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
SGFC+DLL + + L + YEL V DGK+G++
Sbjct: 449 SGFCVDLLKQLSIMLDYDYELYEVHDGKYGSR 480
>gi|221041332|dbj|BAH12343.1| unnamed protein product [Homo sapiens]
Length = 920
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 509
>gi|790530|gb|AAA95961.1| EAA3 [Homo sapiens]
Length = 905
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 462 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 494
>gi|296231997|ref|XP_002761391.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 3
[Callithrix jacchus]
Length = 905
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 462 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 494
>gi|426392770|ref|XP_004062713.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 3
[Gorilla gorilla gorilla]
Length = 920
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 509
>gi|291400955|ref|XP_002716831.1| PREDICTED: glutamate receptor, ionotropic, kainate 1-like isoform 3
[Oryctolagus cuniculus]
Length = 934
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 462 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 494
>gi|268577781|ref|XP_002643873.1| C. briggsae CBR-GLR-7 protein [Caenorhabditis briggsae]
Length = 685
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDL+ E+ FTY + VEDG +GT +D
Sbjct: 199 GYCIDLINMIQVEVNFTYTIYEVEDGSFGTMDD 231
>gi|397484142|ref|XP_003813239.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 1 [Pan
paniscus]
Length = 920
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 509
>gi|351699632|gb|EHB02551.1| Glutamate receptor, ionotropic kainate 1 [Heterocephalus glaber]
Length = 902
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 430 GYCLDLLKELSNILGFLYDVKLVPDGKYGAQND 462
>gi|332229397|ref|XP_003263876.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 1
[Nomascus leucogenys]
Length = 920
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 509
>gi|297707736|ref|XP_002830640.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 2
[Pongo abelii]
Length = 920
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 509
>gi|302564133|ref|NP_001181785.1| glutamate receptor, ionotropic kainate 1 [Macaca mulatta]
Length = 920
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 509
>gi|443702001|gb|ELU00163.1| hypothetical protein CAPTEDRAFT_169825 [Capitella teleta]
Length = 450
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
GFC+DLL + AE LGF YE+ V DG++G ++
Sbjct: 16 GFCMDLLKEIAEMLGFEYEVYVVPDGEYGDKK 47
>gi|426392768|ref|XP_004062712.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 2
[Gorilla gorilla gorilla]
Length = 934
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 462 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 494
>gi|296231995|ref|XP_002761390.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 2
[Callithrix jacchus]
Length = 920
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 509
>gi|291400953|ref|XP_002716830.1| PREDICTED: glutamate receptor, ionotropic, kainate 1-like isoform 2
[Oryctolagus cuniculus]
Length = 905
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 462 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 494
>gi|441672214|ref|XP_004092342.1| PREDICTED: glutamate receptor, ionotropic kainate 1 [Nomascus
leucogenys]
Length = 934
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 462 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 494
>gi|291400951|ref|XP_002716829.1| PREDICTED: glutamate receptor, ionotropic, kainate 1-like isoform 1
[Oryctolagus cuniculus]
Length = 918
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 509
>gi|426392772|ref|XP_004062714.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 4
[Gorilla gorilla gorilla]
Length = 918
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 509
>gi|296231993|ref|XP_002761389.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 1
[Callithrix jacchus]
Length = 918
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 509
>gi|4504117|ref|NP_000821.1| glutamate receptor ionotropic, kainate 1 isoform 1 precursor [Homo
sapiens]
gi|257796306|ref|NP_001158174.1| glutamate receptor, ionotropic kainate 1 [Pan troglodytes]
gi|397484144|ref|XP_003813240.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 2 [Pan
paniscus]
gi|729597|sp|P39086.1|GRIK1_HUMAN RecName: Full=Glutamate receptor ionotropic, kainate 1;
Short=GluK1; AltName: Full=Excitatory amino acid
receptor 3; Short=EAA3; AltName: Full=Glutamate receptor
5; Short=GluR-5; Short=GluR5; Flags: Precursor
gi|455448|gb|AAA52568.1| glutamate receptor [Homo sapiens]
gi|119630314|gb|EAX09909.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_c [Homo
sapiens]
gi|256997160|dbj|BAI22773.1| glutamate receptor, ionotropic, kainate 1 [Pan troglodytes]
Length = 918
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 509
>gi|122063505|sp|Q38PU4.1|GRIK1_MACFA RecName: Full=Glutamate receptor ionotropic, kainate 1;
Short=GluK1; AltName: Full=Glutamate receptor 5;
Short=GluR-5; Short=GluR5; Flags: Precursor
gi|76574778|gb|ABA47257.1| GluR5 [Macaca fascicularis]
Length = 918
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 509
>gi|332229399|ref|XP_003263877.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 2
[Nomascus leucogenys]
Length = 918
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 509
>gi|297707734|ref|XP_002830639.1| PREDICTED: glutamate receptor, ionotropic kainate 1 isoform 1
[Pongo abelii]
Length = 918
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 509
>gi|109065571|ref|XP_001100491.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 1
[Macaca mulatta]
Length = 918
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 509
>gi|12658344|gb|AAK01099.1|AF318611_1 ionotropic glutamate receptor GLR-7 [Caenorhabditis elegans]
Length = 436
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDL+ E+ FTY + VEDG +GT +D
Sbjct: 22 GYCIDLINMIQVEVNFTYTIYEVEDGSFGTMDD 54
>gi|403271661|ref|XP_003927734.1| PREDICTED: glutamate receptor, ionotropic kainate 1 [Saimiri
boliviensis boliviensis]
Length = 918
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 509
>gi|391325082|ref|XP_003737069.1| PREDICTED: glutamate receptor 1-like [Metaseiulus occidentalis]
Length = 824
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
G+C DL AE+L FTYEL V+DGK+G Q
Sbjct: 373 GYCKDLADLIAEKLTFTYELRLVKDGKYGGQ 403
>gi|392890674|ref|NP_001254127.1| Protein GLR-4, isoform b [Caenorhabditis elegans]
gi|351065497|emb|CCD61468.1| Protein GLR-4, isoform b [Caenorhabditis elegans]
Length = 877
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCIDLL + + L F Y ++ V+DG +G +++
Sbjct: 431 GFCIDLLNEMTQVLKFNYTIIEVQDGTYGIEDE 463
>gi|392890672|ref|NP_001254126.1| Protein GLR-4, isoform a [Caenorhabditis elegans]
gi|351065496|emb|CCD61467.1| Protein GLR-4, isoform a [Caenorhabditis elegans]
Length = 951
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCIDLL + + L F Y ++ V+DG +G +++
Sbjct: 431 GFCIDLLNEMTQVLKFNYTIIEVQDGTYGIEDE 463
>gi|444718638|gb|ELW59449.1| Glutamate receptor, ionotropic kainate 1 [Tupaia chinensis]
Length = 1000
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 403 GYCLDLLKELSSILGFIYDVKLVPDGKYGAQND 435
>gi|327274023|ref|XP_003221778.1| PREDICTED: glutamate receptor 2-like [Anolis carolinensis]
Length = 883
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 63 KITFLEEAPYIQMSPPDPVTGKCNM---NRGVICRVAGDAD--MDKIDVAMAHHNESFYQ 117
KI + E + + P D + G + N+ ++ ++ M K ++ + NE +
Sbjct: 385 KIGYWSELDKLVVIPTDGLAGNDSSGLENKTIVVTTIMESPYVMAKKNIDLLEGNERY-- 442
Query: 118 CCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
G+C+DL + A+ GF Y+L V DGK+G ++
Sbjct: 443 --EGYCVDLAAEIAKHCGFKYKLTIVADGKYGARD 475
>gi|260795432|ref|XP_002592709.1| hypothetical protein BRAFLDRAFT_67149 [Branchiostoma floridae]
gi|229277932|gb|EEN48720.1| hypothetical protein BRAFLDRAFT_67149 [Branchiostoma floridae]
Length = 1023
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 112 NESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
N+ FY GFC D+L F++ LGF YE+ VED +G ++
Sbjct: 440 NDRFY----GFCKDMLEHFSKHLGFKYEMYMVEDKNFGARD 476
>gi|119630312|gb|EAX09907.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_b [Homo
sapiens]
gi|119630313|gb|EAX09908.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_b [Homo
sapiens]
Length = 492
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 49 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 81
>gi|348562851|ref|XP_003467222.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 1
[Cavia porcellus]
Length = 905
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 462 GYCLDLLKELSNILGFLYDVKLVPDGKYGAQND 494
>gi|119630315|gb|EAX09910.1| glutamate receptor, ionotropic, kainate 1, isoform CRA_d [Homo
sapiens]
Length = 490
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 49 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 81
>gi|348562853|ref|XP_003467223.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 2
[Cavia porcellus]
Length = 934
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 462 GYCLDLLKELSNILGFLYDVKLVPDGKYGAQND 494
>gi|348562855|ref|XP_003467224.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like isoform 3
[Cavia porcellus]
Length = 903
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 462 GYCLDLLKELSNILGFLYDVKLVPDGKYGAQND 494
>gi|395849078|ref|XP_003797163.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor, ionotropic
kainate 1 [Otolemur garnettii]
Length = 968
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 527 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 559
>gi|307183765|gb|EFN70439.1| Glutamate [NMDA] receptor subunit 3A [Camponotus floridanus]
Length = 902
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGNSHTPP---QGVPEKFHLKITFLEEAPYIQMSPPDPVTG 83
+G K + LD I+WPG P QG EK + I I + P T
Sbjct: 500 VGTIKGGREVRLDT--IIWPGGGIVPAYLEQG-GEKVGMPIY------RIVTALASPFTM 550
Query: 84 KCNMN-----RGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTY 138
N+ RG+ C+ GD M CC G +DLL A ELGF +
Sbjct: 551 VTNLQEGFCLRGLTCQ-QGDTVM----------------CCYGLSMDLLTVVARELGFRF 593
Query: 139 ELVRVEDGKWGTQ 151
+L EDG +G +
Sbjct: 594 DLYLAEDGLFGKR 606
>gi|405952257|gb|EKC20091.1| Glutamate receptor, ionotropic kainate 2, partial [Crassostrea
gigas]
Length = 896
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFC+DLL + A +GF Y++V V+DG +G ED
Sbjct: 410 GFCVDLLREMAAIVGFEYKIVPVDDGLYGMLED 442
>gi|7441647|pir||T15427 hypothetical protein C06A8.9 - Caenorhabditis elegans
Length = 479
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCIDLL + + L F Y ++ V+DG +G +++
Sbjct: 70 GFCIDLLNEMTQVLKFNYTIIEVQDGTYGIEDE 102
>gi|229597659|pdb|2ZNS|A Chain A, Crystal Structure Of The Ligand-Binding Core Of The Human
Ionotropic Glutamate Receptor, Glur5, In Complex With
Glutamate
gi|229597660|pdb|2ZNT|A Chain A, Crystal Structure Of The Ligand-Binding Core Of The Human
Ionotropic Glutamate Receptor, Glur5, In Complex With A
Novel Selective Agonist, Dysiherbaine
gi|229597661|pdb|2ZNU|A Chain A, Crystal Structure Of The Ligand-Binding Core Of The Human
Ionotropic Glutamate Receptor, Glur5, In Complex With A
Novel Selective Agonist, Neodysiherbaine A
gi|284055524|pdb|3FUZ|A Chain A, Crystal Structure Of The Human Glutamate Receptor, Glur5,
Ligand- Binding Core In Complex With L-Glutamate In
Space Group P1
gi|284055525|pdb|3FUZ|B Chain B, Crystal Structure Of The Human Glutamate Receptor, Glur5,
Ligand- Binding Core In Complex With L-Glutamate In
Space Group P1
gi|284055526|pdb|3FV1|A Chain A, Crystal Structure Of The Human Glutamate Receptor, Glur5,
Ligand- Binding Core In Complex With Dysiherbaine In
Space Group P1
gi|284055527|pdb|3FV1|B Chain B, Crystal Structure Of The Human Glutamate Receptor, Glur5,
Ligand- Binding Core In Complex With Dysiherbaine In
Space Group P1
gi|284055528|pdb|3FV2|A Chain A, Crystal Structure Of The Human Glutamate Receptor, Glur5,
Ligand- Binding Core In Complex With Neodysiherbaine A
In Space Group P1
gi|284055529|pdb|3FV2|B Chain B, Crystal Structure Of The Human Glutamate Receptor, Glur5,
Ligand- Binding Core In Complex With Neodysiherbaine A
In Space Group P1
gi|284055530|pdb|3FVG|A Chain A, Crystal Structure Of The Human Glutamate Receptor, Glur5,
Ligand- Binding Core In Complex With Msviii-19 In Space
Group P1
gi|284055531|pdb|3FVG|B Chain B, Crystal Structure Of The Human Glutamate Receptor, Glur5,
Ligand- Binding Core In Complex With Msviii-19 In Space
Group P1
gi|284055532|pdb|3FVK|A Chain A, Crystal Structure Of The Human Glutamate Receptor, Glur5,
Ligand- Binding Core In Complex With
8-Deoxy-Neodysiherbaine A In Space Group P1
gi|284055533|pdb|3FVK|B Chain B, Crystal Structure Of The Human Glutamate Receptor, Glur5,
Ligand- Binding Core In Complex With
8-Deoxy-Neodysiherbaine A In Space Group P1
gi|284055534|pdb|3FVN|A Chain A, Crystal Structure Of The Human Glutamate Receptor, Glur5,
Ligand- Binding Core In Complex With
9-Deoxy-Neodysiherbaine A In Space Group P1
gi|284055535|pdb|3FVN|B Chain B, Crystal Structure Of The Human Glutamate Receptor, Glur5,
Ligand- Binding Core In Complex With
9-Deoxy-Neodysiherbaine A In Space Group P1
gi|284055536|pdb|3FVO|A Chain A, Crystal Structure Of The Human Glutamate Receptor, Glur5,
Ligand-Binding Core In Complex With
8-Epi-Neodysiherbaine A In Space Group P1
gi|284055537|pdb|3FVO|B Chain B, Crystal Structure Of The Human Glutamate Receptor, Glur5,
Ligand-Binding Core In Complex With
8-Epi-Neodysiherbaine A In Space Group P1
Length = 256
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 33 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 65
>gi|515479|gb|AAA21577.1| kainate receptor beta subunit [Carassius auratus]
Length = 464
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + A++LGF Y++ V+DG +G Q++
Sbjct: 50 GYCMDLLTELAKKLGFKYKVHLVKDGAYGRQDE 82
>gi|410895293|ref|XP_003961134.1| PREDICTED: glutamate receptor delta-1 subunit-like [Takifugu
rubripes]
Length = 1030
Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ +V D K+G+Q
Sbjct: 467 GFSIDVLDALAKSLGFKYEIYQVADSKYGSQ 497
>gi|223649046|gb|ACN11281.1| Probable glutamate receptor precursor [Salmo salar]
Length = 460
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A++L F Y + V+DGK+G Q++
Sbjct: 45 GYCIDLLAEIAKKLDFKYTVHLVKDGKYGQQDE 77
>gi|260829527|ref|XP_002609713.1| hypothetical protein BRAFLDRAFT_102475 [Branchiostoma floridae]
gi|229295075|gb|EEN65723.1| hypothetical protein BRAFLDRAFT_102475 [Branchiostoma floridae]
Length = 586
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
GFCIDL+ + A+E+ F + L V DGK+G Q+
Sbjct: 55 GFCIDLITELAKEVDFEFHLYTVADGKYGNQD 86
>gi|195160124|ref|XP_002020926.1| GL16417 [Drosophila persimilis]
gi|194117876|gb|EDW39919.1| GL16417 [Drosophila persimilis]
Length = 949
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 85 CNMNRGVICRVAGDA-----DMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYE 139
+ + +I RVA ++ V + + YQ G+ +DL+G AEE+GF Y+
Sbjct: 416 AKVQKKIIYRVATRIGPPYFSYNETAVELNLTGNAIYQ---GYAVDLIGAIAEEVGFEYQ 472
Query: 140 LVRVEDGKWGTQE 152
V V D ++G Q+
Sbjct: 473 FVPVADQQYGKQD 485
>gi|125986710|ref|XP_001357118.1| GA18046 [Drosophila pseudoobscura pseudoobscura]
gi|54645445|gb|EAL34184.1| GA18046 [Drosophila pseudoobscura pseudoobscura]
Length = 949
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 85 CNMNRGVICRVAGDA-----DMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYE 139
+ + +I RVA ++ V + + YQ G+ +DL+G AEE+GF Y+
Sbjct: 416 AKVQKKIIYRVATRIGPPYFSYNETAVELNLTGNAIYQ---GYAVDLIGAIAEEVGFEYQ 472
Query: 140 LVRVEDGKWGTQE 152
V V D ++G Q+
Sbjct: 473 FVPVADQQYGKQD 485
>gi|402862536|ref|XP_003895611.1| PREDICTED: glutamate receptor, ionotropic kainate 1-like [Papio
anubis]
Length = 582
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 141 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 173
>gi|93279412|pdb|2F34|A Chain A, Crystal Structure Of The Glur5 Ligand Binding Core Dimer
With Ubp310 At 1.74 Angstroms Resolution
gi|93279413|pdb|2F34|B Chain B, Crystal Structure Of The Glur5 Ligand Binding Core Dimer
With Ubp310 At 1.74 Angstroms Resolution
gi|93279414|pdb|2F35|A Chain A, Crystal Structure Of The Glur5 Ligand Binding Core With
Ubp302 At 1.87 Angstroms Resolution
gi|93279415|pdb|2F35|B Chain B, Crystal Structure Of The Glur5 Ligand Binding Core With
Ubp302 At 1.87 Angstroms Resolution
gi|93279416|pdb|2F36|A Chain A, Crystal Structure Of The Glur5 Ligand Binding Core Dimer
With Glutamate At 2.1 Angstroms Resolution
gi|93279417|pdb|2F36|B Chain B, Crystal Structure Of The Glur5 Ligand Binding Core Dimer
With Glutamate At 2.1 Angstroms Resolution
gi|93279418|pdb|2F36|C Chain C, Crystal Structure Of The Glur5 Ligand Binding Core Dimer
With Glutamate At 2.1 Angstroms Resolution
gi|93279419|pdb|2F36|D Chain D, Crystal Structure Of The Glur5 Ligand Binding Core Dimer
With Glutamate At 2.1 Angstroms Resolution
gi|145580060|pdb|2OJT|A Chain A, Structure And Mechanism Of Kainate Receptor Modulation By
Anions
gi|145580061|pdb|2OJT|B Chain B, Structure And Mechanism Of Kainate Receptor Modulation By
Anions
gi|195927247|pdb|2QS1|A Chain A, Crystal Structure Of The Glur5 Ligand Binding Core Dimer
In Complex With Ubp315 At 1.80 Angstroms Resolution
gi|195927248|pdb|2QS1|B Chain B, Crystal Structure Of The Glur5 Ligand Binding Core Dimer
In Complex With Ubp315 At 1.80 Angstroms Resolution
gi|195927249|pdb|2QS2|A Chain A, Crystal Structure Of The Glur5 Ligand Binding Core Dimer
In Complex With Ubp318 At 1.80 Angstroms Resolution
gi|195927250|pdb|2QS2|B Chain B, Crystal Structure Of The Glur5 Ligand Binding Core Dimer
In Complex With Ubp318 At 1.80 Angstroms Resolution
gi|195927251|pdb|2QS3|A Chain A, Crystal Structure Of The Glur5 Ligand Binding Core Dimer
In Complex With Ubp316 At 1.76 Angstroms Resolution
gi|195927252|pdb|2QS3|B Chain B, Crystal Structure Of The Glur5 Ligand Binding Core Dimer
In Complex With Ubp316 At 1.76 Angstroms Resolution
gi|195927253|pdb|2QS4|A Chain A, Crystal Structure Of The Glur5 Ligand Binding Core Dimer
In Complex With Ly466195 At 1.58 Angstroms Resolution
gi|195927254|pdb|2QS4|B Chain B, Crystal Structure Of The Glur5 Ligand Binding Core Dimer
In Complex With Ly466195 At 1.58 Angstroms Resolution
gi|195927255|pdb|2QS4|C Chain C, Crystal Structure Of The Glur5 Ligand Binding Core Dimer
In Complex With Ly466195 At 1.58 Angstroms Resolution
gi|195927256|pdb|2QS4|D Chain D, Crystal Structure Of The Glur5 Ligand Binding Core Dimer
In Complex With Ly466195 At 1.58 Angstroms Resolution
Length = 258
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 34 GYCLDLLKELSNILGFLYDVKLVPDGKYGAQND 66
>gi|60594259|pdb|1YCJ|A Chain A, Crystal Structure Of The Kainate Receptor Glur5 Ligand-
Binding Core In Complex With (S)-Glutamate
gi|60594260|pdb|1YCJ|B Chain B, Crystal Structure Of The Kainate Receptor Glur5 Ligand-
Binding Core In Complex With (S)-Glutamate
gi|151566455|pdb|1VSO|A Chain A, Crystal Structure Of The Ligand-Binding Core Of Iglur5 In
Complex With The Antagonist (S)-Atpo At 1.85 A
Resolution
gi|151567824|pdb|2PBW|A Chain A, Crystal Structure Of The Ligand-Binding Core Of Iglur5 In
Complex With The Partial Agonist Domoic Acid At 2.5 A
Resolution
gi|151567825|pdb|2PBW|B Chain B, Crystal Structure Of The Ligand-Binding Core Of Iglur5 In
Complex With The Partial Agonist Domoic Acid At 2.5 A
Resolution
gi|225698114|pdb|3GBA|A Chain A, X-Ray Structure Of Iglur5 Ligand-Binding Core (S1s2) In
Complex With Dysiherbaine At 1.35a Resolution
gi|225698115|pdb|3GBA|B Chain B, X-Ray Structure Of Iglur5 Ligand-Binding Core (S1s2) In
Complex With Dysiherbaine At 1.35a Resolution
gi|225698116|pdb|3GBA|C Chain C, X-Ray Structure Of Iglur5 Ligand-Binding Core (S1s2) In
Complex With Dysiherbaine At 1.35a Resolution
gi|225698117|pdb|3GBA|D Chain D, X-Ray Structure Of Iglur5 Ligand-Binding Core (S1s2) In
Complex With Dysiherbaine At 1.35a Resolution
gi|225698118|pdb|3GBB|A Chain A, X-Ray Strucutre Of Iglur5 Ligand-Binding Core (S1s2) In
Complex With Msviii-19 At 2.10a Resolution
gi|225698119|pdb|3GBB|B Chain B, X-Ray Strucutre Of Iglur5 Ligand-Binding Core (S1s2) In
Complex With Msviii-19 At 2.10a Resolution
gi|340708212|pdb|3S2V|A Chain A, Crystal Structure Of The Ligand Binding Domain Of Gluk1 In
Complex With An Antagonist
(S)-1-(2'-Amino-2'-Carboxyethyl)-3-[(2-
Carboxythien-3-Yl)methyl]thieno[3,4-D]pyrimidin-2,
4-Dione At 2.5 A Resolution
gi|340708213|pdb|3S2V|B Chain B, Crystal Structure Of The Ligand Binding Domain Of Gluk1 In
Complex With An Antagonist
(S)-1-(2'-Amino-2'-Carboxyethyl)-3-[(2-
Carboxythien-3-Yl)methyl]thieno[3,4-D]pyrimidin-2,
4-Dione At 2.5 A Resolution
gi|385252076|pdb|4E0X|A Chain A, Crystal Structure Of The Kainate Receptor Gluk1
Ligand-Binding Domain In Complex With Kainate In The
Absence Of Glycerol
gi|385252077|pdb|4E0X|B Chain B, Crystal Structure Of The Kainate Receptor Gluk1
Ligand-Binding Domain In Complex With Kainate In The
Absence Of Glycerol
gi|408535899|pdb|4DLD|A Chain A, Crystal Structure Of The Gluk1 Ligand-Binding Domain
(S1s2) In Complex With The Antagonist
(S)-2-Amino-3-(2-(2-Carboxyethyl)-5-Chloro-4-
Nitrophenyl)propionic Acid At 2.0 A Resolution
gi|408535900|pdb|4DLD|B Chain B, Crystal Structure Of The Gluk1 Ligand-Binding Domain
(S1s2) In Complex With The Antagonist
(S)-2-Amino-3-(2-(2-Carboxyethyl)-5-Chloro-4-
Nitrophenyl)propionic Acid At 2.0 A Resolution
Length = 257
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 34 GYCLDLLKELSNILGFLYDVKLVPDGKYGAQND 66
>gi|341887085|gb|EGT43020.1| hypothetical protein CAEBREN_20257 [Caenorhabditis brenneri]
Length = 892
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCIDLL + + L F Y ++ V+DG +G +++
Sbjct: 396 GFCIDLLNEMTKVLKFNYTIIEVQDGTYGIEDE 428
>gi|260790623|ref|XP_002590341.1| hypothetical protein BRAFLDRAFT_216116 [Branchiostoma floridae]
gi|229275533|gb|EEN46352.1| hypothetical protein BRAFLDRAFT_216116 [Branchiostoma floridae]
Length = 349
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%)
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
+ +A D + DV +N + GFC+DL + ELGF YE VEDG++G
Sbjct: 10 VVTIAADGFVLISDVDKDGNNVTGNDRFQGFCMDLFSWISTELGFKYEYYEVEDGQFG 67
>gi|61680017|pdb|1TXF|A Chain A, Crystal Structure Of The Glur5 Ligand Binding Core In
Complex With Glutamate At 2.1 Angstrom Resolution
gi|190613601|pdb|3C31|A Chain A, Crystal Structure Of Glur5 Ligand-Binding Core In Complex
With Lithium At 1.49 Angstrom Resolution
gi|190613602|pdb|3C31|B Chain B, Crystal Structure Of Glur5 Ligand-Binding Core In Complex
With Lithium At 1.49 Angstrom Resolution
gi|190613603|pdb|3C32|A Chain A, Crystal Structure Of Glur5 Ligand-Binding Core In Complex
With Sodium At 1.72 Angstrom Resolution
gi|190613604|pdb|3C32|B Chain B, Crystal Structure Of Glur5 Ligand-Binding Core In Complex
With Sodium At 1.72 Angstrom Resolution
gi|190613605|pdb|3C33|A Chain A, Crystal Structure Of Glur5 Ligand-Binding Core In Complex
With Potassium At 1.78 Angstrom Resolution
gi|190613606|pdb|3C33|B Chain B, Crystal Structure Of Glur5 Ligand-Binding Core In Complex
With Potassium At 1.78 Angstrom Resolution
gi|190613607|pdb|3C34|A Chain A, Crystal Structure Of Glur5 Ligand-Binding Core In Complex
With Rubidium At 1.82 Angstrom Resolution
gi|190613608|pdb|3C34|B Chain B, Crystal Structure Of Glur5 Ligand-Binding Core In Complex
With Rubidium At 1.82 Angstrom Resolution
gi|190613609|pdb|3C35|A Chain A, Crystal Structure Of Glur5 Ligand-Binding Core In Complex
With Cesium At 1.97 Angstrom Resolution
gi|190613610|pdb|3C35|B Chain B, Crystal Structure Of Glur5 Ligand-Binding Core In Complex
With Cesium At 1.97 Angstrom Resolution
gi|190613611|pdb|3C36|A Chain A, Crystal Structure Of Glur5 Ligand-Binding Core In Complex
With Ammonium Ions At 1.68 Angstrom Resolution
gi|190613612|pdb|3C36|B Chain B, Crystal Structure Of Glur5 Ligand-Binding Core In Complex
With Ammonium Ions At 1.68 Angstrom Resolution
Length = 258
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 34 GYCLDLLKELSNILGFLYDVKLVPDGKYGAQND 66
>gi|254574747|pdb|2WKY|A Chain A, Crystal Structure Of The Ligand-Binding Core Of Glur5 In
Complex With The Agonist 4-Ahcp
gi|254574748|pdb|2WKY|B Chain B, Crystal Structure Of The Ligand-Binding Core Of Glur5 In
Complex With The Agonist 4-Ahcp
Length = 258
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 34 GYCLDLLKELSNILGFLYDVKLVPDGKYGAQND 66
>gi|449272900|gb|EMC82591.1| Glutamate receptor delta-1 subunit, partial [Columba livia]
Length = 752
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ + DGK+G Q
Sbjct: 208 GFSIDVLDALAKNLGFKYEIYQAPDGKYGQQ 238
>gi|443687141|gb|ELT90213.1| hypothetical protein CAPTEDRAFT_92293 [Capitella teleta]
Length = 359
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%), Gaps = 4/40 (10%)
Query: 112 NESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
N+ +Y GF +DL+ ++ LGFTYE++ V DGK+G++
Sbjct: 31 NDKYY----GFAVDLIDVISQVLGFTYEIIIVHDGKFGSK 66
>gi|251840|gb|AAB22591.1| glutamate receptor subunit [Homo sapiens]
Length = 980
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Query: 112 NESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
NE F GFC+D+L + AE L F Y L VEDG +G E
Sbjct: 440 NERF----EGFCVDMLRELAELLPFPYRLRLVEDGLYGAPE 476
>gi|341904708|gb|EGT60541.1| hypothetical protein CAEBREN_28776 [Caenorhabditis brenneri]
Length = 566
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCIDLL + + L F Y ++ V+DG +G +++
Sbjct: 70 GFCIDLLNEMTKVLKFNYTIIEVQDGTYGIEDE 102
>gi|322789637|gb|EFZ14842.1| hypothetical protein SINV_00179 [Solenopsis invicta]
Length = 63
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
GFCIDLL K A +GFTY + V DGK+G +
Sbjct: 16 GFCIDLLKKIAHMVGFTYRIELVPDGKYGVYD 47
>gi|47086545|ref|NP_997917.1| glutamate receptor, ionotropic, AMPA 4b precursor [Danio rerio]
gi|33327166|gb|AAQ08961.1| AMPA receptor subunit GluR4B [Danio rerio]
Length = 904
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 78 PDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFT 137
P+ G N V + G M K + M NE + G+C+DL + A+ +GF
Sbjct: 406 PNETYGMENRTVIVTTIMEGPYVMLKKNWEMYEGNEQY----EGYCVDLASEIAKHIGFK 461
Query: 138 YELVRVEDGKWGTQE 152
Y++ V DGK+G ++
Sbjct: 462 YKISIVPDGKYGARD 476
>gi|391328671|ref|XP_003738808.1| PREDICTED: glutamate receptor, ionotropic kainate 3-like
[Metaseiulus occidentalis]
Length = 879
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 112 NESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
NE F G+C+DLL + + LGF+YE+ DG +G + D
Sbjct: 421 NERF----EGYCVDLLQELSRALGFSYEIRLAADGAYGIKND 458
>gi|21358761|gb|AAM47017.1| ionotropic glutamate receptor subunit [Homarus americanus]
Length = 936
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 108 MAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
M NE G+CIDL+ + E + F YE+ DGK+GT +D
Sbjct: 446 MKRTNEDGGDEYYGYCIDLINEIKEIINFEYEIAEAPDGKFGTMDD 491
>gi|157124316|ref|XP_001660418.1| glutamate receptor 7 (ampa) [Aedes aegypti]
gi|108874039|gb|EAT38264.1| AAEL009813-PA [Aedes aegypti]
Length = 914
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A+ + F YE+ VEDGK+G +
Sbjct: 427 GYCIDLLDEIAKIVKFDYEIKEVEDGKFGNMNE 459
>gi|325301278|ref|NP_001191542.1| glutamate receptor subunit protein GluR6 [Aplysia californica]
gi|31074387|gb|AAP41208.1| glutamate receptor subunit protein GluR6 [Aplysia californica]
Length = 875
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
GFCID+L + A+ LGF Y + V DGK+G+++ L
Sbjct: 428 GFCIDILLEMAKILGFQYNVSIVPDGKFGSKKPL 461
>gi|341877019|gb|EGT32954.1| CBN-GLR-3 protein [Caenorhabditis brenneri]
Length = 724
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL K A L FTY + +V D +G++E
Sbjct: 388 GYCIDLLHKIANILKFTYTIQKVRDNAYGSKES 420
>gi|348532530|ref|XP_003453759.1| PREDICTED: glutamate receptor 4-like isoform 2 [Oreochromis
niloticus]
Length = 905
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 63 KITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGF 122
K+ ++++P + P+ +G N V + G M K + M N+ + G+
Sbjct: 396 KLVLIQDSPLL----PNDTSGMENRTVVVTTIMEGPYVMLKKNWEMYEGNDQY----EGY 447
Query: 123 CIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
C+DL + A+ +G Y++ V DGK+G ++
Sbjct: 448 CVDLASEIAKHIGIKYKISIVPDGKYGARD 477
>gi|348532528|ref|XP_003453758.1| PREDICTED: glutamate receptor 4-like isoform 1 [Oreochromis
niloticus]
Length = 905
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 63 KITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGF 122
K+ ++++P + P+ +G N V + G M K + M N+ + G+
Sbjct: 396 KLVLIQDSPLL----PNDTSGMENRTVVVTTIMEGPYVMLKKNWEMYEGNDQY----EGY 447
Query: 123 CIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
C+DL + A+ +G Y++ V DGK+G ++
Sbjct: 448 CVDLASEIAKHIGIKYKISIVPDGKYGARD 477
>gi|260790621|ref|XP_002590340.1| hypothetical protein BRAFLDRAFT_216297 [Branchiostoma floridae]
gi|229275532|gb|EEN46351.1| hypothetical protein BRAFLDRAFT_216297 [Branchiostoma floridae]
Length = 220
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWG 149
GFC+DL + ELGF YE VEDG++G
Sbjct: 1 GFCMDLFSWLSAELGFKYEYYEVEDGQYG 29
>gi|341898133|gb|EGT54068.1| hypothetical protein CAEBREN_31016 [Caenorhabditis brenneri]
Length = 824
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL K A L FTY + +V D +G++E
Sbjct: 410 GYCIDLLHKIANILKFTYTIQKVRDNAYGSKES 442
>gi|194865676|ref|XP_001971548.1| GG14383 [Drosophila erecta]
gi|190653331|gb|EDV50574.1| GG14383 [Drosophila erecta]
Length = 1095
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 110 HHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
H N F G+C DL + A+ELG YEL V+DG +G+++
Sbjct: 522 HGNNRF----EGYCKDLADQLAKELGINYELRVVKDGNYGSEK 560
>gi|12658342|gb|AAK01098.1|AF318610_1 ionotropic glutamate receptor GLR-6 [Caenorhabditis elegans]
Length = 396
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFC+DLL K AE L F Y L V+D K+G +++
Sbjct: 24 GFCVDLLDKLAEMLHFNYTLKIVKDNKYGERKN 56
>gi|71988861|ref|NP_492017.3| Protein GLR-3 [Caenorhabditis elegans]
gi|51011801|emb|CAA99883.3| Protein GLR-3 [Caenorhabditis elegans]
Length = 836
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL K A L FTY + +V D +G++E
Sbjct: 424 GYCIDLLHKIANILKFTYTIQKVRDNAYGSKES 456
>gi|224052292|ref|XP_002191573.1| PREDICTED: glutamate receptor delta-1 subunit [Taeniopygia guttata]
Length = 1010
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ + DGK+G Q
Sbjct: 466 GFSIDVLDALAKNLGFKYEIYQAPDGKYGHQ 496
>gi|196005811|ref|XP_002112772.1| hypothetical protein TRIADDRAFT_25027 [Trichoplax adhaerens]
gi|190584813|gb|EDV24882.1| hypothetical protein TRIADDRAFT_25027 [Trichoplax adhaerens]
Length = 430
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GFCIDL+ +E +GF YEL DG++G+Q
Sbjct: 15 GFCIDLINAISEIVGFKYELYVSPDGQYGSQ 45
>gi|326923318|ref|XP_003207885.1| PREDICTED: glutamate receptor delta-1 subunit-like, partial
[Meleagris gallopavo]
Length = 598
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ + DGK+G Q
Sbjct: 54 GFSIDVLDALAKNLGFKYEIYQAPDGKYGHQ 84
>gi|194752017|ref|XP_001958319.1| GF10860 [Drosophila ananassae]
gi|190625601|gb|EDV41125.1| GF10860 [Drosophila ananassae]
Length = 1124
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 110 HHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
H NE F G+C DL A+ELG YEL V+DG +G+++
Sbjct: 550 HGNERF----EGYCKDLADLLAKELGINYELRPVKDGNYGSEKS 589
>gi|118092396|ref|XP_426488.2| PREDICTED: glutamate receptor delta-1 subunit [Gallus gallus]
Length = 1010
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ + DGK+G Q
Sbjct: 466 GFSIDVLDALAKNLGFKYEIYQAPDGKYGHQ 496
>gi|395501167|ref|XP_003754969.1| PREDICTED: glutamate receptor delta-1 subunit [Sarcophilus
harrisii]
Length = 847
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ + DGK+G Q
Sbjct: 303 GFSIDVLDALAKTLGFKYEIYQAPDGKYGHQ 333
>gi|196005805|ref|XP_002112769.1| hypothetical protein TRIADDRAFT_25025 [Trichoplax adhaerens]
gi|190584810|gb|EDV24879.1| hypothetical protein TRIADDRAFT_25025, partial [Trichoplax
adhaerens]
Length = 412
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 117 QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
Q GFCID++ E LG YEL VED ++G + D
Sbjct: 15 QSYEGFCIDIMDAIKEMLGLDYELYLVEDHQYGARYD 51
>gi|260795309|ref|XP_002592648.1| hypothetical protein BRAFLDRAFT_85123 [Branchiostoma floridae]
gi|229277870|gb|EEN48659.1| hypothetical protein BRAFLDRAFT_85123 [Branchiostoma floridae]
Length = 502
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCID+L K A+ LG Y + V DGK+G + +
Sbjct: 75 GFCIDMLHKLADMLGICYTMYEVPDGKYGAEHE 107
>gi|126272218|ref|XP_001363938.1| PREDICTED: glutamate receptor delta-1 subunit [Monodelphis
domestica]
Length = 1009
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ + DGK+G Q
Sbjct: 465 GFSIDVLDALAKTLGFKYEIYQAPDGKYGHQ 495
>gi|260832478|ref|XP_002611184.1| hypothetical protein BRAFLDRAFT_88417 [Branchiostoma floridae]
gi|229296555|gb|EEN67194.1| hypothetical protein BRAFLDRAFT_88417 [Branchiostoma floridae]
Length = 663
Score = 38.5 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 105 DVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
DVA N S GFC+DL + +LGF YE V DG +G +
Sbjct: 361 DVAKDGKNVSGNDRFQGFCVDLFSWLSSQLGFRYEYYHVTDGHYGVYD 408
>gi|198427497|ref|XP_002120434.1| PREDICTED: similar to Glutamate receptor delta-1 subunit precursor
(GluR delta-1) [Ciona intestinalis]
Length = 1044
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 35/89 (39%)
Query: 62 LKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSG 121
LK+ LEEAP++ + NR H NE + G
Sbjct: 433 LKVATLEEAPFVMI------------NR--------------------HENEPHFH---G 457
Query: 122 FCIDLLGKFAEELGFTYELVRVEDGKWGT 150
F IDLL A+ LGF YE+ V D ++G+
Sbjct: 458 FAIDLLSILADSLGFKYEIYEVGDKQYGS 486
>gi|260822117|ref|XP_002606449.1| hypothetical protein BRAFLDRAFT_93230 [Branchiostoma floridae]
gi|229291791|gb|EEN62459.1| hypothetical protein BRAFLDRAFT_93230 [Branchiostoma floridae]
Length = 563
Score = 38.5 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 109 AHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
+ +N++ Y GFC+D+L AEEL F Y L V DG +G
Sbjct: 107 SENNKTVY---DGFCMDILKGLAEELRFDYTLYEVPDGNFG 144
>gi|291239939|ref|XP_002739876.1| PREDICTED: glutamate receptor, ionotropic, kainate 2-like
[Saccoglossus kowalevskii]
Length = 819
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFC+DLL + ++ LGF Y++ V DGK+G E+
Sbjct: 358 GFCVDLLEEISQILGFKYKIELVPDGKYGAPEE 390
>gi|259024943|gb|ACV91075.1| glutamate receptor subunit protein GluR9 [Aplysia californica]
Length = 707
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 49 SHTPPQG----VPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKI 104
SHT +G +P + ++T +E + P P+ G+ V+ M K
Sbjct: 233 SHTYLRGYWYSLPYVLNKRLTLFDEKHPRNRTSPFPLRGRV---AKVVMIQERPFTMLKR 289
Query: 105 DVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
D + N + GF +DL+ + A+ L F YE+ V DGK+G +
Sbjct: 290 DHMLKRGNAKY----EGFAVDLIREVAQMLEFDYEIYLVNDGKFGNK 332
>gi|195442540|ref|XP_002069012.1| GK12298 [Drosophila willistoni]
gi|194165097|gb|EDW79998.1| GK12298 [Drosophila willistoni]
Length = 1021
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Query: 112 NESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
NE FY GFC+D+L + + E+GF Y L V D K+G ++
Sbjct: 430 NERFY----GFCVDILERISHEVGFDYILDLVPDRKYGAKD 466
>gi|260802564|ref|XP_002596162.1| hypothetical protein BRAFLDRAFT_203024 [Branchiostoma floridae]
gi|229281416|gb|EEN52174.1| hypothetical protein BRAFLDRAFT_203024 [Branchiostoma floridae]
Length = 398
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 21/34 (61%)
Query: 120 SGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
SGFCIDLL + L F Y L V DGK+G+ D
Sbjct: 17 SGFCIDLLKDLSAMLEFDYFLYEVHDGKYGSLRD 50
>gi|56276|emb|CAA77776.1| kainate receptor [Rattus norvegicus]
Length = 920
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 418 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 470
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F +C+DLL + + LGF Y++
Sbjct: 471 G----------------------------NDRF----EAYCLDLLKELSNILGFLYDVKL 498
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 499 VPDGKYGAQND 509
>gi|308480581|ref|XP_003102497.1| CRE-GLR-4 protein [Caenorhabditis remanei]
gi|308261229|gb|EFP05182.1| CRE-GLR-4 protein [Caenorhabditis remanei]
Length = 956
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCIDLL + + L F Y ++ V+DG +G +++
Sbjct: 437 GFCIDLLNEMTKVLKFNYTIIEVQDGTYGIEDE 469
>gi|260790629|ref|XP_002590344.1| hypothetical protein BRAFLDRAFT_216108 [Branchiostoma floridae]
gi|229275536|gb|EEN46355.1| hypothetical protein BRAFLDRAFT_216108 [Branchiostoma floridae]
Length = 340
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 120 SGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
+GFC+DL + ELGF YE VEDG++G
Sbjct: 2 TGFCMDLFSWISTELGFKYEYYEVEDGQFG 31
>gi|153850794|gb|ABS52643.1| GRIA4 [Ambystoma tigrinum]
Length = 897
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 62 LKITFLEEAPYIQMSPPDPVTGKCNM---NRGVICRVAGDAD--MDKIDVAMAHHNESFY 116
+++ F + + + +PV G NR V+ +A M K + NE F
Sbjct: 380 VRVGFWNDMDKLVLIQAEPVPGNGTSAIENRTVVVTTILEAPYVMFKKNHETFEGNEKF- 438
Query: 117 QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DL + A+ +GF Y++ V DGK+G ++
Sbjct: 439 ---EGYCVDLASEIAKHIGFKYKIAIVPDGKYGARDS 472
>gi|12658338|gb|AAK01096.1|AF318608_1 ionotropic glutamate receptor GLR-4 [Caenorhabditis elegans]
Length = 409
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
GFCIDLL + + L F Y ++ V+DG +G +++
Sbjct: 20 GFCIDLLNEMTQVLKFNYTIIEVQDGTYGIEDE 52
>gi|1169962|sp|P22756.3|GRIK1_RAT RecName: Full=Glutamate receptor ionotropic, kainate 1;
Short=GluK1; AltName: Full=Glutamate receptor 5;
Short=GluR-5; Short=GluR5; Flags: Precursor
gi|56278|emb|CAA77777.1| kainate receptor [Rattus norvegicus]
Length = 949
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 418 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 470
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F +C+DLL + + LGF Y++
Sbjct: 471 G----------------------------NDRF----EAYCLDLLKELSNILGFLYDVKL 498
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 499 VPDGKYGAQND 509
>gi|56274|emb|CAA77775.1| kainate receptor [Rattus norvegicus]
Length = 871
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 418 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 470
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F +C+DLL + + LGF Y++
Sbjct: 471 G----------------------------NDRF----EAYCLDLLKELSNILGFLYDVKL 498
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 499 VPDGKYGAQND 509
>gi|242023424|ref|XP_002432134.1| glutamate receptor, ionotropic kainate 2 precursor, putative
[Pediculus humanus corporis]
gi|212517508|gb|EEB19396.1| glutamate receptor, ionotropic kainate 2 precursor, putative
[Pediculus humanus corporis]
Length = 882
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 112 NESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
N SF GFCIDLL A +GF Y + V DGK+G +
Sbjct: 468 NSSF--ALEGFCIDLLDAIANLVGFKYNISLVPDGKYGVYD 506
>gi|325296964|ref|NP_001191669.1| glutamate receptor 8 [Aplysia californica]
gi|169929704|gb|ACB05517.1| glutamate receptor 8 [Aplysia californica]
Length = 603
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 49 SHTPPQG----VPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKI 104
SHT +G +P + ++T +E + P P+ G+ V+ M K
Sbjct: 120 SHTYLRGYWYSLPYVLNKRLTLFDEKHPRNRTSPFPLRGRV---AKVVMIQERPFTMLKR 176
Query: 105 DVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
D + N + GF +DL+ + A+ L F YE+ V DGK+G +
Sbjct: 177 DHMLKRGNAKY----EGFAVDLIREVAQMLEFDYEIYLVNDGKFGNK 219
>gi|328705996|ref|XP_001949419.2| PREDICTED: glutamate receptor, ionotropic kainate 2-like
[Acyrthosiphon pisum]
Length = 883
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 112 NESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
N FY GFC+DLL A+++GF Y L V D K+G Q+
Sbjct: 414 NARFY----GFCVDLLEIIAKQVGFDYILDLVPDNKYGAQD 450
>gi|312374510|gb|EFR22053.1| hypothetical protein AND_15828 [Anopheles darlingi]
Length = 586
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 117 QCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
+CC G +DLL K A E+ F Y L V DG +G +
Sbjct: 64 RCCYGLSMDLLQKLAAEINFDYHLYIVHDGLFGRR 98
>gi|427793845|gb|JAA62374.1| Putative glutamate receptor, partial [Rhipicephalus pulchellus]
Length = 960
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
GFC+DLL + ++ LGF Y + V DG GT++
Sbjct: 512 GFCVDLLREISQHLGFRYRIKLVRDGAHGTRD 543
>gi|156404440|ref|XP_001640415.1| predicted protein [Nematostella vectensis]
gi|156227549|gb|EDO48352.1| predicted protein [Nematostella vectensis]
Length = 223
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 118 CCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
CC GF ID+L +L F E+ VEDGK+G +
Sbjct: 15 CCKGFVIDILISLERDLDFKAEVYIVEDGKYGVYD 49
>gi|391346906|ref|XP_003747707.1| PREDICTED: glutamate receptor, ionotropic kainate 2-like
[Metaseiulus occidentalis]
Length = 962
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 62 LKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSG 121
L++T +E P++ M G ++ + D D + + ++ G
Sbjct: 416 LRVTTIESVPFM-MPKKQKAAGGHQLD------TSSDKGKDPGITGGFNRTGNIHEDYEG 468
Query: 122 FCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
+ +DLL K AE+LGF Y+L V D K+G +
Sbjct: 469 YIMDLLNKLAEKLGFHYDLYLVPDNKFGVEN 499
>gi|114794055|pdb|2GFE|A Chain A, Crystal Structure Of The Glur2 A476e S673d Ligand Binding
Core Mutant At 1.54 Angstroms Resolution
gi|114794056|pdb|2GFE|B Chain B, Crystal Structure Of The Glur2 A476e S673d Ligand Binding
Core Mutant At 1.54 Angstroms Resolution
gi|114794057|pdb|2GFE|C Chain C, Crystal Structure Of The Glur2 A476e S673d Ligand Binding
Core Mutant At 1.54 Angstroms Resolution
Length = 262
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 101 MDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
M K + M NE + G+C+DL + A+ GF Y+L V DGK+G +++
Sbjct: 18 MMKKNHEMLEGNERY----EGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDE 66
>gi|432964253|ref|XP_004086897.1| PREDICTED: glutamate receptor delta-1 subunit-like [Oryzias
latipes]
Length = 995
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ +V D K+G+Q
Sbjct: 427 GFSIDVLDALAKILGFKYEIYQVADSKYGSQ 457
>gi|255071315|ref|XP_002507739.1| predicted protein [Micromonas sp. RCC299]
gi|226523014|gb|ACO68997.1| predicted protein [Micromonas sp. RCC299]
Length = 6445
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 22/120 (18%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
+W + +DIK ++ G G P + KIT+LE A SP PV KC N G
Sbjct: 920 TWREAVIDIKSMLESG-------GYPTEVEPKITYLEFA-----SPMQPVLDKCKGNYGK 967
Query: 92 ICRVAGDADMDKI--DVAMAHHNESFYQCCSGFCIDLLGKF-AEELGFT---YELVRVED 145
C D + I DV + E + + +DL+G F +E+ F+ ++VRVE+
Sbjct: 968 GC----DDKPNSIEPDVCGNQNPEEGLRFRTERTLDLIGDFNIDEISFSKSPRQMVRVEN 1023
>gi|443731712|gb|ELU16738.1| hypothetical protein CAPTEDRAFT_213556 [Capitella teleta]
Length = 431
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 120 SGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
SG I+LL FAE L F+Y L DGKWG +++
Sbjct: 47 SGMLIELLHLFAERLNFSYVLEEPRDGKWGVRDE 80
>gi|328718441|ref|XP_001945266.2| PREDICTED: glutamate receptor, ionotropic kainate 2-like
[Acyrthosiphon pisum]
Length = 925
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
GFCIDLL + A ++GF Y + V D K+G +
Sbjct: 459 GFCIDLLHRIASQVGFHYAITLVPDNKYGAYD 490
>gi|321475251|gb|EFX86214.1| hypothetical protein DAPPUDRAFT_313288 [Daphnia pulex]
Length = 942
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 56/147 (38%), Gaps = 42/147 (28%)
Query: 6 QKSMIIEIELFHPTIFTSGICIGVWKSWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKIT 65
Q M I F + S +G+WK+ G+ + PG S P Q + KI
Sbjct: 369 QVEMTINQMNFKNSRLESKNALGIWKA----GMPGEISFSPGQSLRPFQVISV---FKIA 421
Query: 66 FLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCID 125
+ +AP+I M R A+ +FY G+C+D
Sbjct: 422 VVVQAPFI-------------MKR------------------KANGTVTFY----GYCVD 446
Query: 126 LLGKFAEELGFTYELVRVEDGKWGTQE 152
L+ +GF YEL V DGK+G +
Sbjct: 447 LIKDIQAIMGFEYELYEVPDGKYGNMD 473
>gi|47211653|emb|CAF95059.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1186
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ +V D K+G++
Sbjct: 556 GFSIDVLDALAKSLGFKYEIYQVADSKYGSE 586
>gi|354465882|ref|XP_003495405.1| PREDICTED: glutamate receptor delta-1 subunit-like [Cricetulus
griseus]
Length = 1006
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ + DG++G Q
Sbjct: 462 GFSIDVLDALAKALGFKYEIYQAPDGRYGHQ 492
>gi|383872676|ref|NP_001244596.1| glutamate receptor delta-1 subunit precursor [Macaca mulatta]
gi|380784579|gb|AFE64165.1| glutamate receptor delta-1 subunit precursor [Macaca mulatta]
Length = 1009
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ + DG++G Q
Sbjct: 465 GFSIDVLDALAKALGFKYEIYQAPDGRYGHQ 495
>gi|12658336|gb|AAK01095.1|AF318607_1 ionotropic glutamate receptor GLR-3 [Caenorhabditis elegans]
Length = 398
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL K A L FTY + +V D +G++E
Sbjct: 20 GYCIDLLHKIANILKFTYTIQKVRDNAYGSKES 52
>gi|149034092|gb|EDL88862.1| glutamate receptor, ionotropic, delta 1, isoform CRA_b [Rattus
norvegicus]
Length = 975
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ + DG++G Q
Sbjct: 431 GFSIDVLDALAKALGFKYEIYQAPDGRYGHQ 461
>gi|222875714|gb|ACM68999.1| ionotropic glutamate receptor subunit GluR3 [Xenopus laevis]
Length = 183
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
G+C+DL + A+ +G Y+L VEDGK+G ++
Sbjct: 121 GYCVDLASEIAKHVGIKYKLSIVEDGKYGARD 152
>gi|256997170|dbj|BAI22778.1| glutamate receptor, ionotropic, delta 1 [Pan troglodytes]
Length = 1009
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ + DG++G Q
Sbjct: 465 GFSIDVLDALAKALGFKYEIYQAPDGRYGHQ 495
>gi|350538701|ref|NP_001232890.1| glutamate receptor, ionotropic kainate 5 [Danio rerio]
gi|160773959|gb|AAI55084.1| Grik5 protein [Danio rerio]
Length = 716
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 101 MDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
M KI+ NE + GFC+D+L + ++ L FTY + V+DG +G E
Sbjct: 420 MRKINYQEFEGNEQY----EGFCVDMLRELSDILKFTYRIKLVDDGLYGAPE 467
>gi|55770852|ref|NP_060021.1| glutamate receptor ionotropic, delta-1 precursor [Homo sapiens]
gi|38372397|sp|Q9ULK0.2|GRID1_HUMAN RecName: Full=Glutamate receptor ionotropic, delta-1; Short=GluD1;
Short=GluR delta-1 subunit; Flags: Precursor
gi|119600746|gb|EAW80340.1| glutamate receptor, ionotropic, delta 1, isoform CRA_c [Homo
sapiens]
gi|193785294|dbj|BAG54447.1| unnamed protein product [Homo sapiens]
Length = 1009
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ + DG++G Q
Sbjct: 465 GFSIDVLDALAKALGFKYEIYQAPDGRYGHQ 495
>gi|13259380|ref|NP_077354.1| glutamate receptor ionotropic, delta-1 precursor [Rattus
norvegicus]
gi|38372260|sp|Q62640.1|GRID1_RAT RecName: Full=Glutamate receptor ionotropic, delta-1; Short=GluD1;
Short=GluR delta-1 subunit; Flags: Precursor
gi|475542|gb|AAA17828.1| glutamate receptor delta-1 subunit [Rattus norvegicus]
Length = 1009
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ + DG++G Q
Sbjct: 465 GFSIDVLDALAKALGFKYEIYQAPDGRYGHQ 495
>gi|220418|dbj|BAA01041.1| glutamate receptor channel subunit delta-1 [Mus musculus]
Length = 1009
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ + DG++G Q
Sbjct: 465 GFSIDVLDALAKALGFKYEIYQAPDGRYGHQ 495
>gi|281340538|gb|EFB16122.1| hypothetical protein PANDA_003403 [Ailuropoda melanoleuca]
Length = 753
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ + DG++G Q
Sbjct: 209 GFSIDVLDALAKALGFKYEIYQAPDGRYGHQ 239
>gi|153792501|ref|NP_032192.2| glutamate receptor ionotropic, delta-1 precursor [Mus musculus]
gi|341940774|sp|Q61627.2|GRID1_MOUSE RecName: Full=Glutamate receptor ionotropic, delta-1; Short=GluD1;
Short=GluR delta-1 subunit; Flags: Precursor
gi|74209793|dbj|BAE23610.1| unnamed protein product [Mus musculus]
gi|148692942|gb|EDL24889.1| glutamate receptor, ionotropic, delta 1 [Mus musculus]
gi|189442135|gb|AAI67177.1| Glutamate receptor, ionotropic, delta 1 [synthetic construct]
Length = 1009
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ + DG++G Q
Sbjct: 465 GFSIDVLDALAKALGFKYEIYQAPDGRYGHQ 495
>gi|405960644|gb|EKC26547.1| Glutamate receptor [Crassostrea gigas]
Length = 1086
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GFCIDL K AE++ TY++ V+DG +G +
Sbjct: 176 GFCIDLAQKVAEKINMTYDICLVQDGMYGAE 206
>gi|345488321|ref|XP_001605858.2| PREDICTED: glutamate receptor, ionotropic kainate 2-like [Nasonia
vitripennis]
Length = 954
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
GFCIDLL + A +GF Y + V DGK+G +
Sbjct: 446 GFCIDLLKEIAHMVGFAYRIELVPDGKYGVYD 477
>gi|355562440|gb|EHH19034.1| hypothetical protein EGK_19669, partial [Macaca mulatta]
Length = 771
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ + DG++G Q
Sbjct: 227 GFSIDVLDALAKALGFKYEIYQAPDGRYGHQ 257
>gi|340708726|ref|XP_003392973.1| PREDICTED: glutamate receptor, ionotropic kainate 5-like [Bombus
terrestris]
Length = 943
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 106 VAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
V N ++Y GFCIDLL + + +GF YE+ ED ++G+
Sbjct: 466 VMYNEENGTYY----GFCIDLLDEIKDTVGFQYEIRETEDRRYGS 506
>gi|332834593|ref|XP_003312719.1| PREDICTED: glutamate receptor delta-1 subunit-like [Pan
troglodytes]
Length = 785
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ + DG++G Q
Sbjct: 241 GFSIDVLDALAKALGFKYEIYQAPDGRYGHQ 271
>gi|350413210|ref|XP_003489918.1| PREDICTED: glutamate receptor, ionotropic kainate 4-like [Bombus
impatiens]
Length = 943
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 106 VAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGT 150
V N ++Y GFCIDLL + + +GF YE+ ED ++G+
Sbjct: 466 VMYNEENGTYY----GFCIDLLDEIKDTVGFQYEIRETEDRRYGS 506
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.141 0.460
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,733,125,506
Number of Sequences: 23463169
Number of extensions: 114752712
Number of successful extensions: 194576
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1454
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 192534
Number of HSP's gapped (non-prelim): 1540
length of query: 154
length of database: 8,064,228,071
effective HSP length: 117
effective length of query: 37
effective length of database: 9,614,004,594
effective search space: 355718169978
effective search space used: 355718169978
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)