BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13438
(154 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O15399|NMDE4_HUMAN Glutamate receptor ionotropic, NMDA 2D OS=Homo sapiens GN=GRIN2D
PE=2 SV=2
Length = 1336
Score = 72.8 bits (177), Expect = 7e-13, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 403 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 460
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 461 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 516
Query: 152 ED 153
D
Sbjct: 517 ID 518
>sp|Q03391|NMDE4_MOUSE Glutamate receptor ionotropic, NMDA 2D OS=Mus musculus GN=Grin2d
PE=1 SV=3
Length = 1323
Score = 72.8 bits (177), Expect = 8e-13, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 400 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 457
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 458 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 513
Query: 152 ED 153
D
Sbjct: 514 ID 515
>sp|Q62645|NMDE4_RAT Glutamate receptor ionotropic, NMDA 2D OS=Rattus norvegicus
GN=Grin2d PE=1 SV=2
Length = 1323
Score = 72.4 bits (176), Expect = 9e-13, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 32 SWEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGV 91
SWE++ L +K +W Q V + HL + LEE P++ + P DP++G C + V
Sbjct: 400 SWEQQTLRLKYPLWSRYGRFL-QPVDDTQHLTVATLEERPFVIVEPADPISGTC-IRDSV 457
Query: 92 ICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + +++ +CC GFCID+L + A +GF+Y+L V +GK G +
Sbjct: 458 PCR----SQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKK 513
Query: 152 ED 153
D
Sbjct: 514 ID 515
>sp|Q14957|NMDE3_HUMAN Glutamate receptor ionotropic, NMDA 2C OS=Homo sapiens GN=GRIN2C
PE=2 SV=3
Length = 1233
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L +K VWP S + Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WEHGVLYMKYPVWPRYSASL-QPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + DVA CC GFCID+L K A + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDVAPYTK-----LCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGKR 486
>sp|Q01098|NMDE3_MOUSE Glutamate receptor ionotropic, NMDA 2C OS=Mus musculus GN=Grin2c
PE=2 SV=2
Length = 1239
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ L +K VWP S T Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WDHGVLYMKYPVWPRYS-TSLQPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + D+ CC GFCID+L K A+ + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDITPYTK-----LCCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKR 486
>sp|Q00961|NMDE3_RAT Glutamate receptor ionotropic, NMDA 2C OS=Rattus norvegicus
GN=Grin2c PE=1 SV=1
Length = 1237
Score = 70.1 bits (170), Expect = 5e-12, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ L +K VWP S T Q V + HL + LEE P++ + PDP TG C N V
Sbjct: 375 WDHGVLYMKYPVWPRYS-TSLQPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNT-VP 432
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR + D+ CC GFCID+L K A+ + F+Y+L V +GK G +
Sbjct: 433 CRRQSNHTFSSGDLTPYTK-----LCCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKR 486
>sp|Q5R1P3|NMDE2_CANFA Glutamate receptor ionotropic, NMDA 2B OS=Canis familiaris
GN=GRIN2B PE=2 SV=1
Length = 1485
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIVSENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>sp|P35436|NMDE1_MOUSE Glutamate receptor ionotropic, NMDA 2A OS=Mus musculus GN=Grin2a
PE=1 SV=2
Length = 1464
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>sp|Q00959|NMDE1_RAT Glutamate receptor ionotropic, NMDA 2A OS=Rattus norvegicus
GN=Grin2a PE=1 SV=2
Length = 1464
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE + L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENQTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>sp|Q00960|NMDE2_RAT Glutamate receptor ionotropic, NMDA 2B OS=Rattus norvegicus
GN=Grin2b PE=1 SV=1
Length = 1482
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIISENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>sp|Q01097|NMDE2_MOUSE Glutamate receptor ionotropic, NMDA 2B OS=Mus musculus GN=Grin2b
PE=1 SV=3
Length = 1482
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIISENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>sp|Q13224|NMDE2_HUMAN Glutamate receptor ionotropic, NMDA 2B OS=Homo sapiens GN=GRIN2B
PE=1 SV=3
Length = 1484
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
W+ + L +K VWP P E HL I LEEAP++ + DP++G C M V
Sbjct: 379 WKDKSLQMKYYVWP--RMCPETEEQEDDHLSIVTLEEAPFVIVESVDPLSGTC-MRNTVP 435
Query: 93 C--RVAGDADMDKIDVAMAHHNESFY--QCCSGFCIDLLGKFAEELGFTYELVRVEDGKW 148
C R+ + D+ E Y +CC GFCID+L K ++ + FTY+L V +GK
Sbjct: 436 CQKRIVTENKTDE---------EPGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKH 486
Query: 149 GTQ 151
G +
Sbjct: 487 GKK 489
>sp|Q5R1P0|NMDZ1_CANFA Glutamate receptor ionotropic, NMDA 1 OS=Canis familiaris GN=GRIN1
PE=2 SV=2
Length = 943
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 457
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 458 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 510
Query: 154 L 154
+
Sbjct: 511 V 511
>sp|Q05586|NMDZ1_HUMAN Glutamate receptor ionotropic, NMDA 1 OS=Homo sapiens GN=GRIN1 PE=1
SV=1
Length = 938
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPND-------TSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>sp|P35439|NMDZ1_RAT Glutamate receptor ionotropic, NMDA 1 OS=Rattus norvegicus GN=Grin1
PE=1 SV=1
Length = 938
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICR----VA 96
+ I+WPG P+G LKI + + P++ + P M+ G C+ V
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKP--------TMSDGT-CKEEFTVN 427
Query: 97 GDADMDKI-----DVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GD I D + + QCC GFCIDLL K A + FTYE+ V DGK+GTQ
Sbjct: 428 GDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQ 487
Query: 152 EDL 154
E +
Sbjct: 488 ERV 490
>sp|Q5IS45|NMDE1_PANTR Glutamate receptor ionotropic, NMDA 2A OS=Pan troglodytes GN=GRIN2A
PE=2 SV=1
Length = 1464
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENHTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>sp|Q12879|NMDE1_HUMAN Glutamate receptor ionotropic, NMDA 2A OS=Homo sapiens GN=GRIN2A
PE=1 SV=1
Length = 1464
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 33 WEKEGLDIKDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
WE L ++ VWP + P+ HL I LEEAP++ + DP+T C N V
Sbjct: 378 WENHTLSLRHAVWP-RYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRN-TVP 435
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
CR KI+ + + + +CC GFCID+L K + + FTY+L V +GK G +
Sbjct: 436 CR-----KFVKINNS-TNEGMNVKKCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
>sp|P35438|NMDZ1_MOUSE Glutamate receptor ionotropic, NMDA 1 OS=Mus musculus GN=Grin1 PE=1
SV=1
Length = 938
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 41 KDIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSP-------PDPVTGKCNMNRGVIC 93
+ I+WPG P+G LKI + + P++ + P + T + + VIC
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTMSDGTCKEEFTVNGDPVKKVIC 436
Query: 94 RVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
D + + QCC GFC+DLL K A + FTYE+ V DGK+GTQE
Sbjct: 437 TGPND-------TSPGSPRHTVPQCCYGFCVDLLIKLARTMNFTYEVHLVADGKFGTQER 489
Query: 154 L 154
+
Sbjct: 490 V 490
>sp|O60391|NMD3B_HUMAN Glutamate receptor ionotropic, NMDA 3B OS=Homo sapiens GN=GRIN3B
PE=2 SV=2
Length = 1043
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKDIVWPGNSHT---PPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW LD++ PG + PPQG L++ L E P++ PD G+C
Sbjct: 388 SWRDGQLDLE----PGGASARPPPPQGAQVWPKLRVVTLLEHPFVFARDPDE-DGQCPA- 441
Query: 89 RGVICRVAGDAD---MDKIDVAMAHHN--ESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C G D +D + A+A+ + + +CC G+CIDLL + AE+ F +EL V
Sbjct: 442 -GQLCLDPGTNDSATLDALFAALANGSAPRALRKCCYGYCIDLLERLAEDTPFDFELYLV 500
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 501 GDGKYGALRD 510
>sp|Q8VHN2|NMD3B_RAT Glutamate receptor ionotropic, NMDA 3B OS=Rattus norvegicus
GN=Grin3b PE=1 SV=2
Length = 1002
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKDIVWPGNS--HTP-PQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW+ LD + PG + P P G + L++ L E P++ D G+C
Sbjct: 388 SWQDGQLDFQ----PGAAALRVPSPSGTQARPKLRVVTLVEHPFVFTRESDE-DGQCPA- 441
Query: 89 RGVICRVAGDADMDKIDVAMA-----HHNESFYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C G D ++D A + +CC G+CIDLL + AE+L F +EL V
Sbjct: 442 -GQLCLDPGTNDSARLDALFAALVNGSVPRTLRRCCYGYCIDLLERLAEDLAFDFELYIV 500
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 501 GDGKYGALRD 510
>sp|Q91ZU9|NMD3B_MOUSE Glutamate receptor ionotropic, NMDA 3B OS=Mus musculus GN=Grin3b
PE=1 SV=1
Length = 1003
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 15/130 (11%)
Query: 32 SWEKEGLDIKDIVWPGNS--HTP-PQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN 88
SW+ LD + PG + P P G + L++ L E P++ D G+C
Sbjct: 388 SWQDGQLDFQ----PGAAALRVPSPSGTQARPKLRVVTLVEHPFVFTRESDE-DGQCPA- 441
Query: 89 RGVICRVAGDADMDKIDVAM-AHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRV 143
G +C G D ++D A N S +CC G+CIDLL + AE+L F +EL V
Sbjct: 442 -GQLCLDPGTNDSARLDALFTALENGSVPRTLRRCCYGYCIDLLERLAEDLAFDFELYIV 500
Query: 144 EDGKWGTQED 153
DGK+G D
Sbjct: 501 GDGKYGALRD 510
>sp|Q9R1M7|NMD3A_RAT Glutamate receptor ionotropic, NMDA 3A OS=Rattus norvegicus
GN=Grin3a PE=1 SV=1
Length = 1135
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGGRIVMDSGIWPEQAQRHKTHFQHPNKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDADM-DKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ M D++ ++ N++ F +CC G+CIDLL + AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSMLDRLFSSLHSSNDTVPIKFKKCCYGYCIDLLEQLAEDMNFDFDLYIVG 601
Query: 145 DGKWGTQED 153
DGK+G ++
Sbjct: 602 DGKYGAWKN 610
>sp|Q8TCU5|NMD3A_HUMAN Glutamate receptor ionotropic, NMDA 3A OS=Homo sapiens GN=GRIN3A
PE=1 SV=2
Length = 1115
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 32 SWEKEGLDIKDIVWP--GNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNR 89
SW+ + + +WP H P K HL++ L E P++ D G C +
Sbjct: 483 SWQGGKIVMDYGIWPEQAQRHKTHFQHPSKLHLRVVTLIEHPFVFTREVDD-EGLCPAGQ 541
Query: 90 GVICRVAGDAD-MDKIDVAMAHHNES----FYQCCSGFCIDLLGKFAEELGFTYELVRVE 144
+ + D+ +D + ++ N++ F +CC G+CIDLL K AE++ F ++L V
Sbjct: 542 LCLDPMTNDSSTLDSLFSSLHSSNDTVPIKFKKCCYGYCIDLLEKIAEDMNFDFDLYIVG 601
Query: 145 DGKWGT 150
DGK+G
Sbjct: 602 DGKYGA 607
>sp|B4PVB0|NMDA1_DROYA Glutamate [NMDA] receptor subunit 1 OS=Drosophila yakuba GN=Nmdar1
PE=3 SV=1
Length = 997
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADM 101
+I+WPG P+G+ HLK+ +EE P++ + +C + C + ++D
Sbjct: 400 EIIWPGKQRRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFRCEPDERP-CPLFNNSD- 457
Query: 102 DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
A NE CC G+CIDLL + ++ + FTY+L DG++G
Sbjct: 458 -------ATANEF---CCRGYCIDLLIELSKRINFTYDLALSPDGQFG 495
>sp|B3P2E5|NMDA1_DROER Glutamate [NMDA] receptor subunit 1 OS=Drosophila erecta GN=Nmdar1
PE=3 SV=1
Length = 997
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADM 101
+I+WPG P+G+ HLK+ +EE P++ + +C + C + ++D
Sbjct: 400 EIIWPGKQRRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFRCEPDERP-CPLFNNSD- 457
Query: 102 DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
A NE CC G+CIDLL + ++ + FTY+L DG++G
Sbjct: 458 -------ATANEF---CCRGYCIDLLIELSKRINFTYDLALSPDGQFG 495
>sp|B4QWW7|NMDA1_DROSI Glutamate [NMDA] receptor subunit 1 OS=Drosophila simulans
GN=Nmdar1 PE=3 SV=1
Length = 997
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADM 101
+I+WPG P+G+ HLK+ +EE P++ + +C + C + ++D
Sbjct: 400 EIIWPGKQRRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFRCEPDERP-CPLFNNSD- 457
Query: 102 DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
A NE CC G+CIDLL + ++ + FTY+L DG++G
Sbjct: 458 -------ATANEF---CCRGYCIDLLIELSKRINFTYDLALSPDGQFG 495
>sp|B4I414|NMDA1_DROSE Glutamate [NMDA] receptor subunit 1 OS=Drosophila sechellia
GN=Nmdar1 PE=3 SV=1
Length = 997
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADM 101
+I+WPG P+G+ HLK+ +EE P++ + +C + C + ++D
Sbjct: 400 EIIWPGKQRRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFRCEPDERP-CPLFNNSD- 457
Query: 102 DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
A NE CC G+CIDLL + ++ + FTY+L DG++G
Sbjct: 458 -------ATANEF---CCRGYCIDLLIELSKRINFTYDLALSPDGQFG 495
>sp|B3LZ39|NMDA1_DROAN Glutamate [NMDA] receptor subunit 1 OS=Drosophila ananassae
GN=Nmdar1 PE=3 SV=1
Length = 994
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN-RGVICRVAGDAD 100
+I+WPG P+G+ HLK+ +EE P++ + +C + R A DA
Sbjct: 397 EIIWPGKQRRKPEGIMIPTHLKVLTIEEKPFVYVRRMGDDEFRCEPDERPCPLFNASDAT 456
Query: 101 MDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
++ CC G+CIDLL + ++ + FTY+L DG++G
Sbjct: 457 ANEF-------------CCRGYCIDLLIELSKRINFTYDLALSPDGQFG 492
>sp|Q24418|NMDA1_DROME Glutamate [NMDA] receptor subunit 1 OS=Drosophila melanogaster
GN=Nmdar1 PE=1 SV=1
Length = 997
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADM 101
+I+WPG P+G+ HL++ +EE P++ + +C + C + ++D
Sbjct: 400 EIIWPGKQRRKPEGIMIPTHLRLLTIEEKPFVYVRRMGDDEFRCEPDERP-CPLFNNSD- 457
Query: 102 DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
A NE CC G+CIDLL + ++ + FTY+L DG++G
Sbjct: 458 -------ATANEF---CCRGYCIDLLIELSKRINFTYDLALSPDGQFG 495
>sp|Q296F7|NMDA1_DROPS Glutamate [NMDA] receptor subunit 1 OS=Drosophila pseudoobscura
pseudoobscura GN=Nmdar1 PE=3 SV=1
Length = 1004
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 35 KEGLDIKD--IVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
K ++I D I+WPG + P+G+ HLK+ +EE P++ + +C
Sbjct: 403 KMRMNINDSEIIWPGKQNRKPEGIMIPTHLKVLTIEEKPFVYVRRMGDDEFRC------- 455
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
+ D + A + + CC G+CIDLL + ++ + FTY+L DG++G
Sbjct: 456 -----EPDERPCPLFNATDSTANEYCCRGYCIDLLIELSKRINFTYDLALSPDGQFG 507
>sp|B4GF83|NMDA1_DROPE Glutamate [NMDA] receptor subunit 1 OS=Drosophila persimilis
GN=Nmdar1 PE=3 SV=1
Length = 1004
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 35 KEGLDIKD--IVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVI 92
K ++I D I+WPG + P+G+ HLK+ +EE P++ + +C
Sbjct: 403 KMRMNINDSEIIWPGKQNRKPEGIMIPTHLKVLTIEEKPFVYVRRMGDDEFRC------- 455
Query: 93 CRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
+ D + A + + CC G+CIDLL + ++ + FTY+L DG++G
Sbjct: 456 -----EPDERPCPLFNATDSTANEYCCRGYCIDLLIELSKRINFTYDLALSPDGQFG 507
>sp|B4MU83|NMDA1_DROWI Glutamate [NMDA] receptor subunit 1 OS=Drosophila willistoni
GN=Nmdar1 PE=3 SV=1
Length = 982
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADM 101
+I+W G P+G+ HLK+ +EE P++ + C N C + D
Sbjct: 389 EIIWAGKQKRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFHCEPNERP-CPLFNTTD- 446
Query: 102 DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
A NE CCSG+CIDLL + A+ + FTY+L DG++G
Sbjct: 447 -------ATANEF---CCSGYCIDLLIELAKRINFTYDLALSPDGQFG 484
>sp|B4LZB5|NMDA1_DROVI Glutamate [NMDA] receptor subunit 1 OS=Drosophila virilis GN=Nmdar1
PE=3 SV=1
Length = 984
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 14/109 (12%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN-RGVICRVAGDAD 100
+I+W G P+G+ HLK+ +EE P++ + +C + R A DA
Sbjct: 397 EIIWGGKQKRKPEGIMIPTHLKVLTIEEKPFVYVRRMGDDEFRCEPDERPCPLFNASDAT 456
Query: 101 MDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
++ CC G+CIDLL + ++ + FTY+L DG++G
Sbjct: 457 TNEF-------------CCRGYCIDLLIELSKRINFTYDLALSPDGQFG 492
>sp|B4KD90|NMDA1_DROMO Glutamate [NMDA] receptor subunit 1 OS=Drosophila mojavensis
GN=Nmdar1 PE=3 SV=1
Length = 980
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 14/108 (12%)
Query: 43 IVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMN-RGVICRVAGDADM 101
I+W G P+G+ HLK+ +EE P++ + +C + R A DA
Sbjct: 398 IIWGGKQRRKPEGIMIPTHLKVLTIEEKPFVYVRRMGDDEFRCEPDERPCPLFNASDATA 457
Query: 102 DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
++ CC G+CIDLL + ++ + FTY+L DG++G
Sbjct: 458 NEF-------------CCRGYCIDLLIELSKRINFTYDLALSPDGQFG 492
>sp|B4JHV0|NMDA1_DROGR Glutamate [NMDA] receptor subunit 1 OS=Drosophila grimshawi
GN=Nmdar1 PE=3 SV=1
Length = 982
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 42 DIVWPGNSHTPPQGVPEKFHLKITFLEEAPYIQMSPPDPVTGKCNMNRGVICRVAGDADM 101
+I+W G P+G+ HLK+ +EE P++ + +C + +
Sbjct: 395 EIIWGGKQKRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFRCEPD---------ERPC 445
Query: 102 DKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVRVEDGKWG 149
+ + A NE CC G+CIDLL + ++ + FTY+L DG++G
Sbjct: 446 PLFNASGATANEF---CCRGYCIDLLIELSKRINFTYDLALSPDGQFG 490
>sp|P42260|GRIK2_RAT Glutamate receptor ionotropic, kainate 2 OS=Rattus norvegicus
GN=Grik2 PE=1 SV=2
Length = 908
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 494
>sp|P39087|GRIK2_MOUSE Glutamate receptor ionotropic, kainate 2 OS=Mus musculus GN=Grik2
PE=1 SV=4
Length = 908
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQEDL 154
G+CIDLL + + LGFTYE+ VEDGK+G Q+D+
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDV 494
>sp|Q13003|GRIK3_HUMAN Glutamate receptor ionotropic, kainate 3 OS=Homo sapiens GN=GRIK3
PE=2 SV=3
Length = 919
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>sp|P42264|GRIK3_RAT Glutamate receptor ionotropic, kainate 3 OS=Rattus norvegicus
GN=Grik3 PE=1 SV=1
Length = 919
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>sp|B1AS29|GRIK3_MOUSE Glutamate receptor ionotropic, kainate 3 OS=Mus musculus GN=Grik3
PE=2 SV=1
Length = 919
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>sp|Q38PU2|GRIK3_MACFA Glutamate receptor ionotropic, kainate 3 OS=Macaca fascicularis
GN=GRIK3 PE=2 SV=1
Length = 919
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + A LGF+YE+ VEDGK+G Q+D
Sbjct: 464 GYCIDLLKELAHILGFSYEIRLVEDGKYGAQDD 496
>sp|Q13002|GRIK2_HUMAN Glutamate receptor ionotropic, kainate 2 OS=Homo sapiens GN=GRIK2
PE=1 SV=1
Length = 908
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>sp|Q38PU3|GRIK2_MACFA Glutamate receptor ionotropic, kainate 2 OS=Macaca fascicularis
GN=GRIK2 PE=2 SV=1
Length = 908
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+CIDLL + + LGFTYE+ VEDGK+G Q+D
Sbjct: 461 GYCIDLLRELSTILGFTYEIRLVEDGKYGAQDD 493
>sp|Q91756|GLRK_XENLA Glutamate receptor U1 OS=Xenopus laevis GN=kbp PE=2 SV=1
Length = 479
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQE 152
GFCIDLL + ++ LGF Y + V+DG++G ++
Sbjct: 63 GFCIDLLSELSQSLGFNYTIKEVKDGRYGAKD 94
>sp|Q60934|GRIK1_MOUSE Glutamate receptor ionotropic, kainate 1 OS=Mus musculus GN=Grik1
PE=2 SV=2
Length = 836
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 403 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 455
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F G+C+DLL + + LGF Y++
Sbjct: 456 G----------------------------NDRF----EGYCLDLLKELSNILGFLYDVKL 483
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 484 VPDGKYGAQND 494
>sp|P39086|GRIK1_HUMAN Glutamate receptor ionotropic, kainate 1 OS=Homo sapiens GN=GRIK1
PE=1 SV=1
Length = 918
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 509
>sp|Q38PU4|GRIK1_MACFA Glutamate receptor ionotropic, kainate 1 OS=Macaca fascicularis
GN=GRIK1 PE=2 SV=1
Length = 918
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQED 153
G+C+DLL + + LGF Y++ V DGK+G Q D
Sbjct: 477 GYCLDLLKELSNILGFIYDVKLVPDGKYGAQND 509
>sp|P22756|GRIK1_RAT Glutamate receptor ionotropic, kainate 1 OS=Rattus norvegicus
GN=Grik1 PE=1 SV=3
Length = 949
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 43/131 (32%)
Query: 27 IGVWKSWEKEGLDIKDIVWPGN---SHTPPQGVPEKFHLKITFLEEAPYIQMSPPD-PVT 82
IG+W S GL++ D GN S+ + + + T LEE PY+ D P+
Sbjct: 418 IGIWNS--NSGLNMTD----GNRDRSNNITDSLANRTLIVTTILEE-PYVMYRKSDKPLY 470
Query: 83 GKCNMNRGVICRVAGDADMDKIDVAMAHHNESFYQCCSGFCIDLLGKFAEELGFTYELVR 142
G N+ F +C+DLL + + LGF Y++
Sbjct: 471 G----------------------------NDRF----EAYCLDLLKELSNILGFLYDVKL 498
Query: 143 VEDGKWGTQED 153
V DGK+G Q D
Sbjct: 499 VPDGKYGAQND 509
>sp|Q62640|GRID1_RAT Glutamate receptor ionotropic, delta-1 OS=Rattus norvegicus
GN=Grid1 PE=2 SV=1
Length = 1009
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ + DG++G Q
Sbjct: 465 GFSIDVLDALAKALGFKYEIYQAPDGRYGHQ 495
>sp|Q9ULK0|GRID1_HUMAN Glutamate receptor ionotropic, delta-1 OS=Homo sapiens GN=GRID1
PE=2 SV=2
Length = 1009
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 121 GFCIDLLGKFAEELGFTYELVRVEDGKWGTQ 151
GF ID+L A+ LGF YE+ + DG++G Q
Sbjct: 465 GFSIDVLDALAKALGFKYEIYQAPDGRYGHQ 495
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.141 0.460
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,844,969
Number of Sequences: 539616
Number of extensions: 2779029
Number of successful extensions: 5314
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 5192
Number of HSP's gapped (non-prelim): 92
length of query: 154
length of database: 191,569,459
effective HSP length: 107
effective length of query: 47
effective length of database: 133,830,547
effective search space: 6290035709
effective search space used: 6290035709
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)