Your job contains 1 sequence.
>psy13451
MHGRKKESVSVQEAKKRSAKVKWYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIPDINS
LWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHISRAP
NYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEANFSNYSAWHY
RSKLLPLLYPDPNNHLPIEQDKYVNEFSMVESAVFTEPKDQSAWFYQRWLLGERTSPVQI
ISAGVLPSGVTFVTFNQLVDLTSTSQIKVDSNVLMSWTSLNGASRSFIWVRFLLSLSCPY
RNYISVALLTSITLLQHLHPGSSDSNEIILKRFDLLKTLDPLRLNYYKDSESKYKIETFI
QTNPRANQITNLSSLQLTSIHHMHCFAHCKQVDLSNNPLTNNCLRHLTPLVACESLKLTH
CSLSSLHVFPHLPSLESLDVSHNAPNIILCVYFQSLKLTHCSLSSLHVFPHLPSLESLDV
SHNAIDHIEDSVFAKYEACVQVILTGNPVSADMVVKHCTLVV
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13451
(522 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|A5A779 - symbol:RABGGTA "Geranylgeranyl transfe... 608 4.7e-70 2
UNIPROTKB|F1PIE1 - symbol:RABGGTA "Uncharacterized protei... 605 1.6e-69 2
UNIPROTKB|Q5EA80 - symbol:RABGGTA "Geranylgeranyl transfe... 604 2.0e-69 2
MGI|MGI:1860443 - symbol:Rabggta "Rab geranylgeranyl tran... 599 2.3e-68 2
ZFIN|ZDB-GENE-060929-1042 - symbol:rabggta "Rab geranylge... 448 3.5e-67 3
RGD|621697 - symbol:Rabggta "Rab geranylgeranyltransferas... 619 1.9e-60 1
UNIPROTKB|Q92696 - symbol:RABGGTA "Geranylgeranyl transfe... 613 8.1e-60 1
UNIPROTKB|H0YLH3 - symbol:RABGGTA "Geranylgeranyl transfe... 608 2.7e-59 1
UNIPROTKB|F1MGN1 - symbol:RABGGTA "Geranylgeranyl transfe... 595 6.6e-58 1
FB|FBgn0037293 - symbol:CG12007 species:7227 "Drosophila ... 473 2.0e-49 2
TAIR|locus:2121860 - symbol:RGTA1 "RAB geranylgeranyl tra... 380 4.3e-48 3
WB|WBGene00019778 - symbol:M57.2 species:6239 "Caenorhabd... 444 4.7e-46 2
DICTYBASE|DDB_G0269570 - symbol:rabggta "protein geranylg... 469 1.5e-44 1
POMBASE|SPCC1620.05 - symbol:SPCC1620.05 "Rab geranylgera... 387 7.2e-36 1
SGD|S000003568 - symbol:BET4 "Alpha subunit of Type II ge... 348 1.5e-31 1
TAIR|locus:2153015 - symbol:RGTA2 "RAB geranylgeranyl tra... 325 3.3e-31 2
ASPGD|ASPL0000044135 - symbol:AN1981 species:162425 "Emer... 206 6.3e-14 2
SGD|S000001502 - symbol:RAM2 "Alpha subunit of farnesyltr... 197 3.6e-13 1
DICTYBASE|DDB_G0283053 - symbol:fntA "protein prenyltrans... 196 5.4e-13 1
GENEDB_PFALCIPARUM|PF14_0403 - symbol:PF14_0403 "protein ... 170 1.2e-12 2
UNIPROTKB|Q8IL46 - symbol:PF14_0403 "Protein prenyltransf... 170 1.2e-12 2
POMBASE|SPAPB1A10.04c - symbol:cwp1 "geranylgeranyltransf... 189 2.0e-12 1
WB|WBGene00019823 - symbol:fnta-1 species:6239 "Caenorhab... 179 3.5e-12 2
UNIPROTKB|O44501 - symbol:fnta-1 "Protein FNTA-1" species... 179 3.5e-12 2
CGD|CAL0005317 - symbol:RAM2 species:5476 "Candida albica... 170 4.7e-10 1
UNIPROTKB|Q5APE8 - symbol:RAM2 "Putative uncharacterized ... 170 4.7e-10 1
UNIPROTKB|F1P1Q8 - symbol:PTAR1 "Uncharacterized protein"... 152 5.4e-10 1
ZFIN|ZDB-GENE-030131-866 - symbol:fnta "farnesyltransfera... 169 1.1e-09 1
UNIPROTKB|E9PQP6 - symbol:FNTA "Protein farnesyltransfera... 157 5.7e-09 1
TAIR|locus:2081177 - symbol:FTA "farnesyltransferase A" s... 160 8.2e-09 1
UNIPROTKB|H0YKP6 - symbol:RABGGTA "Geranylgeranyl transfe... 140 1.1e-08 1
UNIPROTKB|P49354 - symbol:FNTA "Protein farnesyltransfera... 157 2.6e-08 1
UNIPROTKB|F1N081 - symbol:FNTA "Protein farnesyltransfera... 156 3.3e-08 1
UNIPROTKB|P29702 - symbol:FNTA "Protein farnesyltransfera... 156 3.3e-08 1
FB|FBgn0031633 - symbol:CG2976 species:7227 "Drosophila m... 153 5.2e-08 1
UNIPROTKB|E2RHY8 - symbol:FNTA "Uncharacterized protein" ... 153 7.3e-08 1
UNIPROTKB|F1NJX8 - symbol:FNTA "Uncharacterized protein" ... 154 9.3e-08 2
UNIPROTKB|H0YE66 - symbol:H0YE66 "Uncharacterized protein... 141 1.3e-07 1
DICTYBASE|DDB_G0287077 - symbol:DDB_G0287077 "protein pre... 145 6.5e-07 1
RGD|2625 - symbol:Fnta "farnesyltransferase, CAAX box, al... 142 1.2e-06 1
UNIPROTKB|Q04631 - symbol:Fnta "Protein farnesyltransfera... 142 1.2e-06 1
MGI|MGI:104683 - symbol:Fnta "farnesyltransferase, CAAX b... 139 2.6e-06 1
FB|FBgn0027296 - symbol:l(1)G0144 "lethal (1) G0144" spec... 132 1.7e-05 1
RGD|708369 - symbol:Ptar1 "protein prenyltransferase alph... 129 4.1e-05 1
MGI|MGI:2444651 - symbol:Lingo4 "leucine rich repeat and ... 131 4.1e-05 1
UNIPROTKB|Q6UY18 - symbol:LINGO4 "Leucine-rich repeat and... 130 5.3e-05 1
UNIPROTKB|Q8SPE9 - symbol:TLR4 "Toll-like receptor 4" spe... 130 8.3e-05 1
UNIPROTKB|H0YCW1 - symbol:FNTA "Protein farnesyltransfera... 116 0.00016 1
UNIPROTKB|F1NCZ7 - symbol:PHLPP2 "Uncharacterized protein... 125 0.00046 1
UNIPROTKB|F1PEG1 - symbol:PTAR1 "Uncharacterized protein"... 119 0.00047 1
UNIPROTKB|J9P4Q0 - symbol:PTAR1 "Uncharacterized protein"... 119 0.00052 1
UNIPROTKB|G4MNG3 - symbol:MGG_16220 "Uncharacterized prot... 120 0.00053 1
UNIPROTKB|F1NK31 - symbol:PTAR1 "Uncharacterized protein"... 117 0.00072 1
MGI|MGI:2669796 - symbol:Rtn4rl2 "reticulon 4 receptor-li... 117 0.00084 1
UNIPROTKB|H0YLG7 - symbol:RABGGTA "Geranylgeranyl transfe... 108 0.00086 1
>UNIPROTKB|A5A779 [details] [associations]
symbol:RABGGTA "Geranylgeranyl transferase type-2 subunit
alpha" species:9823 "Sus scrofa" [GO:0018344 "protein
geranylgeranylation" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR002088 InterPro:IPR009087 Pfam:PF01239 Pfam:PF07711
ProDom:PD331837 PROSITE:PS51147 GO:GO:0046872 GO:GO:0008270
InterPro:IPR025875 Pfam:PF12799 eggNOG:COG5536 GO:GO:0018344
GO:GO:0004663 CTD:5875 GeneTree:ENSGT00550000075121
HOGENOM:HOG000007845 HOVERGEN:HBG002171 KO:K14050 OMA:DFATLWN
OrthoDB:EOG4FXR7F Gene3D:2.60.40.1130 SUPFAM:SSF49594 EMBL:AB271949
RefSeq:NP_001092063.1 UniGene:Ssc.45681 ProteinModelPortal:A5A779
SMR:A5A779 STRING:A5A779 Ensembl:ENSSSCT00000002230
GeneID:100049679 KEGG:ssc:100049679 Uniprot:A5A779
Length = 567
Score = 608 (219.1 bits), Expect = 4.7e-70, Sum P(2) = 4.7e-70
Identities = 132/305 (43%), Positives = 184/305 (60%)
Query: 1 MHGRKKESVSVQ--EAKK--RSAKVKWYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIP 56
MHGR K S + EAK+ R K+K Y +T+F+KR+ E D+ L LTS++L P
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQTATQTVFQKRQAGELDESVLELTSQILGANP 60
Query: 57 DINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHI 116
D +LWN R+EVL ++ + EEL LV EL + CL PKSYGTW RC++L +
Sbjct: 61 DFATLWNCRREVLQRLEVQKSPEELAALVKAELGFLESCLRVNPKSYGTWHHRCWLLGRL 120
Query: 117 SRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEANFSNYS 176
PN+ +ELELC +LE+DERNFHCWDYRR+V + V P +EL ++ I NFSNYS
Sbjct: 121 PE-PNWARELELCARFLEVDERNFHCWDYRRFVASQAAVPPAEELAFTDSLITRNFSNYS 179
Query: 177 AWHYRSKLLPLLYPDPNN----HLPIEQDKYVNEFSMVESAVFTEPKDQSAWFYQRWLLG 232
+WHYRS LLP L+P P++ LP +D + E +V++A FT+P DQSAWFY RWLLG
Sbjct: 180 SWHYRSCLLPQLHPQPDSGPQGRLP--EDVLLKELELVQNAFFTDPNDQSAWFYHRWLLG 237
Query: 233 ERTSPVQIISAGVLP--SGVTFVTFNQ--LVD-LTSTSQIKVDSNVL-MSWTSLNGASR- 285
R P + + V+F++ LV T T + V+ + L + W + +G +R
Sbjct: 238 -RADPQDALRCLHVSRDEACLTVSFSRPLLVGPSTETLLLMVNESPLSVEWRTPDGRNRP 296
Query: 286 SFIWV 290
S +W+
Sbjct: 297 SHVWL 301
Score = 120 (47.3 bits), Expect = 4.7e-70, Sum P(2) = 4.7e-70
Identities = 43/141 (30%), Positives = 68/141 (48%)
Query: 308 LLTSITLLQHLHPGSSDSNEIILKRFDLLKTLDPLRLNYYKDSESKYKIETFIQTNPRAN 367
LLT I L++ L P + L+ F LK +DP+R Y D SK+ +E + A+
Sbjct: 385 LLTIILLMRALDPLLYEKET--LQYFQTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYAD 442
Query: 368 -QITNLSSLQLTSIHHMHCFAHCKQVDLSNNPLTNNCLRHLTPLVA---C-ESLKLTHCS 422
++ +L LT + H+ +DLS+N L R L P +A C E L+ +
Sbjct: 443 VRVLHLGHKDLTVLCHLEQLLLVTHLDLSHNRL-----RALPPALAALRCLEVLQANDNA 497
Query: 423 LSSLHVFPHLPSLESLDVSHN 443
+ SL +LP L+ L + +N
Sbjct: 498 IESLDGVTNLPRLQELSLCNN 518
Score = 62 (26.9 bits), Expect = 6.1e-64, Sum P(2) = 6.1e-64
Identities = 23/97 (23%), Positives = 43/97 (44%)
Query: 416 LKLTHCSLSSLHVFPHLPSL---ESLDVSHNA-----PNIILCVYFQSLKLTHCSLSSLH 467
+++ H L V HL L LD+SHN P + + L+ ++ SL
Sbjct: 443 VRVLHLGHKDLTVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQANDNAIESLD 502
Query: 468 VFPHLPSLESLDVSHNAIDHIEDSVFAKYEACVQVIL 504
+LP L+ L + +N + + +V +C +++L
Sbjct: 503 GVTNLPRLQELSLCNNRLQ--QPAVLQPLASCPRLVL 537
Score = 53 (23.7 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 446 NIILCVYFQSLKLTHCSLSSLHVFPHLPSL---ESLDVSHNAIDHIEDSVFAKYEACVQV 502
N +L + + +++ H L V HL L LD+SHN + + ++ A C++V
Sbjct: 433 NSVLKMEYADVRVLHLGHKDLTVLCHLEQLLLVTHLDLSHNRLRALPPALAAL--RCLEV 490
Query: 503 I 503
+
Sbjct: 491 L 491
>UNIPROTKB|F1PIE1 [details] [associations]
symbol:RABGGTA "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0018342 "protein prenylation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002088
InterPro:IPR009087 Pfam:PF01239 Pfam:PF07711 ProDom:PD331837
PROSITE:PS51147 GO:GO:0008270 InterPro:IPR025875 Pfam:PF12799
GO:GO:0018342 GO:GO:0004663 CTD:5875 GeneTree:ENSGT00550000075121
KO:K14050 OMA:DFATLWN Gene3D:2.60.40.1130 SUPFAM:SSF49594
EMBL:AAEX03005616 RefSeq:XP_850528.1 Ensembl:ENSCAFT00000019372
GeneID:608407 KEGG:cfa:608407 Uniprot:F1PIE1
Length = 567
Score = 605 (218.0 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 131/305 (42%), Positives = 184/305 (60%)
Query: 1 MHGRKKESVSVQ--EAKK--RSAKVKWYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIP 56
MHGR K S + EAK+ R K+K Y + +T+F+KR+ E D+ L LTS++L P
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQTVFQKRQAGELDESVLELTSQILGANP 60
Query: 57 DINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHI 116
D +LWN R+EVL ++A + EEL LV EL + CL PKSYGTW RC++L +
Sbjct: 61 DFATLWNCRREVLQRLEAQKSPEELAALVKTELGFLESCLRVNPKSYGTWHHRCWLLGRL 120
Query: 117 SRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEANFSNYS 176
PN+ +ELELC +LE+DERNFHCWDYRR+V + V P +EL ++ I NFSNYS
Sbjct: 121 PE-PNWARELELCARFLEVDERNFHCWDYRRFVAAQAAVPPAEELAFTDSLITRNFSNYS 179
Query: 177 AWHYRSKLLPLLYPDPNN----HLPIEQDKYVNEFSMVESAVFTEPKDQSAWFYQRWLLG 232
+WHYRS LLP L+P P++ LP +D + E +V++A FT+P DQSAWFY RWLLG
Sbjct: 180 SWHYRSCLLPQLHPQPDSGPQGRLP--EDVLLKELELVQNAFFTDPNDQSAWFYHRWLLG 237
Query: 233 ERTSPVQIISAGVLP--SGVTFVTFNQLVDL---TSTSQIKVDSNVL-MSWTSLNGAS-R 285
R P + + V+F++ V + T T + VD + L + W + +G +
Sbjct: 238 -RADPQDALRCLHVSRDEACLTVSFSRPVLVGPRTETLLLMVDESPLAVEWRTPDGRNWP 296
Query: 286 SFIWV 290
+W+
Sbjct: 297 GHVWL 301
Score = 118 (46.6 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 43/141 (30%), Positives = 67/141 (47%)
Query: 308 LLTSITLLQHLHPGSSDSNEIILKRFDLLKTLDPLRLNYYKDSESKYKIETFIQTNPRAN 367
LLT I L++ L P + L+ F LK +DP+R Y D SK+ +E + A
Sbjct: 385 LLTIILLMRALDPLLYEKET--LQYFQTLKAVDPMRAAYLDDLRSKFLLENSLLKMEYAE 442
Query: 368 -QITNLSSLQLTSIHHMHCFAHCKQVDLSNNPLTNNCLRHLTPLVA---C-ESLKLTHCS 422
++ +L LT + H+ +DLS+N L R L P +A C E L+ +
Sbjct: 443 VRVLHLGHKDLTVLCHLEQLLLVTHLDLSHNRL-----RALPPALAALRCLEVLQANDNA 497
Query: 423 LSSLHVFPHLPSLESLDVSHN 443
+ SL +LP L+ L + +N
Sbjct: 498 IESLDGVTNLPRLQELSLCNN 518
Score = 65 (27.9 bits), Expect = 6.1e-64, Sum P(2) = 6.1e-64
Identities = 26/105 (24%), Positives = 46/105 (43%)
Query: 416 LKLTHCSLSSLHVFPHLPSL---ESLDVSHNA-----PNIILCVYFQSLKLTHCSLSSLH 467
+++ H L V HL L LD+SHN P + + L+ ++ SL
Sbjct: 443 VRVLHLGHKDLTVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQANDNAIESLD 502
Query: 468 VFPHLPSLESLDVSHNAIDHIEDSVFAKYEACVQVILT---GNPV 509
+LP L+ L + +N + + V +C +++L GNP+
Sbjct: 503 GVTNLPRLQELSLCNNRLQ--QRMVLQPLASCPRLVLLNLQGNPL 545
Score = 52 (23.4 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 446 NIILCVYFQSLKLTHCSLSSLHVFPHLPSL---ESLDVSHNAIDHIEDSVFAKYEACVQV 502
N +L + + +++ H L V HL L LD+SHN + + ++ A C++V
Sbjct: 433 NSLLKMEYAEVRVLHLGHKDLTVLCHLEQLLLVTHLDLSHNRLRALPPALAAL--RCLEV 490
Query: 503 I 503
+
Sbjct: 491 L 491
>UNIPROTKB|Q5EA80 [details] [associations]
symbol:RABGGTA "Geranylgeranyl transferase type-2 subunit
alpha" species:9913 "Bos taurus" [GO:0018344 "protein
geranylgeranylation" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR002088 InterPro:IPR009087 Pfam:PF01239 Pfam:PF07711
ProDom:PD331837 PROSITE:PS51147 GO:GO:0046872 GO:GO:0008270
eggNOG:COG5536 GO:GO:0018344 GO:GO:0004663 EMBL:BT020689
EMBL:BT020760 EMBL:BT020911 EMBL:BC111228 EMBL:BT020650
IPI:IPI00717057 RefSeq:NP_001015614.1 UniGene:Bt.7696
ProteinModelPortal:Q5EA80 SMR:Q5EA80 STRING:Q5EA80 PRIDE:Q5EA80
Ensembl:ENSBTAT00000025020 GeneID:516619 KEGG:bta:516619 CTD:5875
GeneTree:ENSGT00550000075121 HOGENOM:HOG000007845
HOVERGEN:HBG002171 InParanoid:Q5EA80 KO:K14050 OMA:DFATLWN
OrthoDB:EOG4FXR7F NextBio:20872272 ArrayExpress:Q5EA80
Gene3D:2.60.40.1130 SUPFAM:SSF49594 Uniprot:Q5EA80
Length = 567
Score = 604 (217.7 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 132/305 (43%), Positives = 183/305 (60%)
Query: 1 MHGRKKESVSVQ--EAKK--RSAKVKWYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIP 56
MHGR K S + EAK+ R K+K Y +T+F+KR+ E D+ L LTS++L P
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQAATQTVFQKRQAGELDESVLELTSQILGANP 60
Query: 57 DINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHI 116
D +LWN R+EVL ++ + EEL LV EL + CL PKSYGTW RC++L +
Sbjct: 61 DFATLWNCRREVLQQLEVQKSPEELATLVKAELGFLESCLRVNPKSYGTWHHRCWLLSRL 120
Query: 117 SRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEANFSNYS 176
PN+ +ELELC +LE+DERNFHCWDYRR+V + V P +EL ++ I NFSNYS
Sbjct: 121 PE-PNWARELELCARFLEVDERNFHCWDYRRFVAAQAAVPPAEELAFTDSLITRNFSNYS 179
Query: 177 AWHYRSKLLPLLYPDPNN----HLPIEQDKYVNEFSMVESAVFTEPKDQSAWFYQRWLLG 232
+WHYRS LLP L+P P++ LP +D + E +V++A FT+P DQSAWFY RWLLG
Sbjct: 180 SWHYRSCLLPQLHPQPDSGPQGRLP--EDVLLKELELVQNAFFTDPNDQSAWFYHRWLLG 237
Query: 233 ERTSPVQIISAGVLP--SGVTFVTFNQLVDLTS---TSQIKVDSNVL-MSWTSLNGASR- 285
R P + + V+F++ + + S T + VD + L + W + G +R
Sbjct: 238 -RADPQDALRCLHVSRDEACLTVSFSRPLLVGSGMETLLLMVDESPLAVEWRTPEGRNRP 296
Query: 286 SFIWV 290
S IW+
Sbjct: 297 SHIWL 301
Score = 118 (46.6 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 43/141 (30%), Positives = 67/141 (47%)
Query: 308 LLTSITLLQHLHPGSSDSNEIILKRFDLLKTLDPLRLNYYKDSESKYKIETFIQTNPRAN 367
LLT I L++ L P + L+ F LK +DP+R Y D SK+ +E + A
Sbjct: 385 LLTIILLMRALDPLQYEKET--LQYFQTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYAE 442
Query: 368 -QITNLSSLQLTSIHHMHCFAHCKQVDLSNNPLTNNCLRHLTPLVA---C-ESLKLTHCS 422
++ +L LT + H+ +DLS+N L R L P +A C E L+ +
Sbjct: 443 VRVLHLGHKDLTVLCHLEQLLLVTHLDLSHNRL-----RALPPALAALRCLEVLQANDNA 497
Query: 423 LSSLHVFPHLPSLESLDVSHN 443
+ SL +LP L+ L + +N
Sbjct: 498 IESLDGVTNLPRLQELILCNN 518
Score = 53 (23.7 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 446 NIILCVYFQSLKLTHCSLSSLHVFPHLPSL---ESLDVSHNAIDHIEDSVFAKYEACVQV 502
N +L + + +++ H L V HL L LD+SHN + + ++ A C++V
Sbjct: 433 NSVLKMEYAEVRVLHLGHKDLTVLCHLEQLLLVTHLDLSHNRLRALPPALAAL--RCLEV 490
Query: 503 I 503
+
Sbjct: 491 L 491
>MGI|MGI:1860443 [details] [associations]
symbol:Rabggta "Rab geranylgeranyl transferase, a subunit"
species:10090 "Mus musculus" [GO:0004659 "prenyltransferase
activity" evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase
activity" evidence=ISO;IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008318 "protein prenyltransferase activity"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018342 "protein prenylation" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=ISO;IMP] [GO:0046872 "metal
ion binding" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR002088 InterPro:IPR009087 Pfam:PF01239 Pfam:PF07711
ProDom:PD331837 PROSITE:PS51147 MGI:MGI:1860443 GO:GO:0046872
GO:GO:0008270 eggNOG:COG5536 GO:GO:0018344 GO:GO:0004663 CTD:5875
GeneTree:ENSGT00550000075121 HOGENOM:HOG000007845
HOVERGEN:HBG002171 KO:K14050 OMA:DFATLWN OrthoDB:EOG4FXR7F
Gene3D:2.60.40.1130 SUPFAM:SSF49594 EMBL:AF127654 EMBL:AF127655
EMBL:AF127656 EMBL:AF127658 EMBL:AF127659 EMBL:AF127660
EMBL:AF127662 EMBL:AK002625 IPI:IPI00271905 IPI:IPI00620701
RefSeq:NP_062392.1 UniGene:Mm.87216 PDB:3PZ1 PDB:3PZ2 PDB:3PZ3
PDBsum:3PZ1 PDBsum:3PZ2 PDBsum:3PZ3 ProteinModelPortal:Q9JHK4
SMR:Q9JHK4 IntAct:Q9JHK4 STRING:Q9JHK4 PhosphoSite:Q9JHK4
PaxDb:Q9JHK4 PRIDE:Q9JHK4 Ensembl:ENSMUST00000062861
Ensembl:ENSMUST00000163889 Ensembl:ENSMUST00000169237 GeneID:56187
KEGG:mmu:56187 UCSC:uc007uai.1 InParanoid:Q9JHK4
EvolutionaryTrace:Q9JHK4 NextBio:311974 Bgee:Q9JHK4
CleanEx:MM_RABGGTA Genevestigator:Q9JHK4
GermOnline:ENSMUSG00000040472 Uniprot:Q9JHK4
Length = 567
Score = 599 (215.9 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 130/305 (42%), Positives = 183/305 (60%)
Query: 1 MHGRKKESVSVQ--EAKK--RSAKVKWYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIP 56
MHGR K S + EAK+ R K+K Y + + +F+KR+ E D+ L LTS++L P
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKREAGELDESVLELTSQILGANP 60
Query: 57 DINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHI 116
D +LWN R+EVL ++ + EEL LV EL + CL PKSYGTW RC++L +
Sbjct: 61 DFATLWNCRREVLQQLETQKSPEELAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRL 120
Query: 117 SRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEANFSNYS 176
PN+ +ELELC +LE DERNFHCWDYRR+V + VAP +EL ++ I NFSNYS
Sbjct: 121 PE-PNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYS 179
Query: 177 AWHYRSKLLPLLYPDPNN----HLPIEQDKYVNEFSMVESAVFTEPKDQSAWFYQRWLLG 232
+WHYRS LLP L+P P++ LP ++ + E +V++A FT+P DQSAWFY RWLLG
Sbjct: 180 SWHYRSCLLPQLHPQPDSGPQGRLP--ENVLLRELELVQNAFFTDPNDQSAWFYHRWLLG 237
Query: 233 ERTSPVQIISAGVLP--SGVTFVTFNQLVDLTS---TSQIKVDSNVL-MSWTSLNGASR- 285
R P ++ + V F++ + + S T + VD L + W + +G +R
Sbjct: 238 -RAEPHDVLCCLHVSREEACLSVCFSRPLIVGSKMGTLLLTVDEAPLSVEWRTPDGRNRP 296
Query: 286 SFIWV 290
S +W+
Sbjct: 297 SHVWL 301
Score = 113 (44.8 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 43/141 (30%), Positives = 68/141 (48%)
Query: 308 LLTSITLLQHLHPGSSDSNEIILKRFDLLKTLDPLRLNYYKDSESKYKIETFIQTNPRAN 367
LLT I L++ L P + L+ F LK +DP+R Y D SK+ +E + A+
Sbjct: 385 LLTIILLMRALDPLLYEKET--LEYFSTLKAVDPMRAAYLDDLRSKFLVENSVLKMEYAD 442
Query: 368 -QITNLSSLQLTSIHHMHCFAHCKQVDLSNNPLTNNCLRHLTPLVA---C-ESLKLTHCS 422
++ +L+ LT + H+ +DLS+N L R L P +A C E L+ +
Sbjct: 443 VRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRL-----RALPPALAALRCLEVLQASDNV 497
Query: 423 LSSLHVFPHLPSLESLDVSHN 443
L +L +LP L L + +N
Sbjct: 498 LENLDGVANLPRLRELLLCNN 518
Score = 56 (24.8 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 435 LESLDVSHNAPNIILCVYFQSLKLTHCSLSSLHVFPHLPSL---ESLDVSHNAIDHIEDS 491
L+ L N +L + + +++ H + L V HL L LD+SHN + + +
Sbjct: 422 LDDLRSKFLVENSVLKMEYADVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRALPPA 481
Query: 492 VFAKYEACVQVILTGNPV 509
+ A C++V+ + V
Sbjct: 482 LAAL--RCLEVLQASDNV 497
>ZFIN|ZDB-GENE-060929-1042 [details] [associations]
symbol:rabggta "Rab geranylgeranyltransferase,
alpha subunit" species:7955 "Danio rerio" [GO:0018342 "protein
prenylation" evidence=IEA] [GO:0008318 "protein prenyltransferase
activity" evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002088
InterPro:IPR009087 Pfam:PF01239 Pfam:PF07711 ProDom:PD331837
PROSITE:PS51147 PROSITE:PS51450 ZFIN:ZDB-GENE-060929-1042
GO:GO:0008270 InterPro:IPR025875 Pfam:PF12799 eggNOG:COG5536
GO:GO:0018342 GO:GO:0004663 CTD:5875 HOGENOM:HOG000007845
HOVERGEN:HBG002171 KO:K14050 OrthoDB:EOG4FXR7F Gene3D:2.60.40.1130
SUPFAM:SSF49594 EMBL:BC124249 IPI:IPI01024172 RefSeq:NP_001070131.1
UniGene:Dr.138610 ProteinModelPortal:Q08CG5 SMR:Q08CG5 PRIDE:Q08CG5
GeneID:767725 KEGG:dre:767725 InParanoid:Q08CG5 NextBio:20918111
Bgee:Q08CG5 Uniprot:Q08CG5
Length = 580
Score = 448 (162.8 bits), Expect = 3.5e-67, Sum P(3) = 3.5e-67
Identities = 87/196 (44%), Positives = 124/196 (63%)
Query: 1 MHGRKKESVSVQEA----KKRSAKVKWYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIP 56
MHGR K + Q+ K+R K+K + +++ +KR E+D+EAL LT ++L + P
Sbjct: 1 MHGRVKVKTTAQQEEEKRKEREKKLKAFVCARDSVLKKRSAGEHDEEALDLTQQLLSSNP 60
Query: 57 DINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHI 116
D +LWNYR+EVLLH++ ++E+ +L + EL + CL PKSYG W R +V +
Sbjct: 61 DFATLWNYRREVLLHLETLREKDEVQKLYESELHFIEACLKVNPKSYGCWHHRSWVNTRL 120
Query: 117 SRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEANFSNYS 176
+ P++ +EL LC+ L LDERNFHCWDYRR V V+ +EL ++ I +NFSNYS
Sbjct: 121 PQ-PDWTRELGLCDRCLSLDERNFHCWDYRRLVVKESGVSVEQELQFTDRLIGSNFSNYS 179
Query: 177 AWHYRSKLLPLLYPDP 192
+WHYRS LLP L P P
Sbjct: 180 SWHYRSTLLPQLRPQP 195
Score = 144 (55.7 bits), Expect = 3.5e-67, Sum P(3) = 3.5e-67
Identities = 43/138 (31%), Positives = 71/138 (51%)
Query: 308 LLTSITLLQHLHPGSSDSNEIILKRFDLLKTLDPLRLNYYKDSESKYKIE-TFIQTNPRA 366
LLT I L++ L P + L F LK +DP+R +YY D SK+ IE T ++
Sbjct: 398 LLTIILLMRALDPLGHEKET--LAHFQTLKEVDPMRSSYYSDLCSKFLIENTILKMEYAE 455
Query: 367 NQITNLSSLQLTSIHHMHCFAHCKQVDLSNNPLTNNCLRHLTPLVAC-ESLKLTHCSLSS 425
++ +LS+ +LT++ H+ ++LS+N L L ++ C E L+ ++ S
Sbjct: 456 VRVFSLSNKKLTTLCHLDQLLLVTHINLSSNQLQR--LPPQFSMLQCLEVLEADDNAIES 513
Query: 426 LHVFPHLPSLESLDVSHN 443
L HLP LE + + +N
Sbjct: 514 LEGLYHLPKLEEVSLKNN 531
Score = 121 (47.7 bits), Expect = 3.5e-67, Sum P(3) = 3.5e-67
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 186 PLLYPDPNNHLPIEQDKYVNEFSMVESAVFTEPKDQSAWFYQRWLLGERTSPVQIIS 242
P P ++H E+ + + E+ + +A FT+P DQSAWFY RWLLG R ++IS
Sbjct: 207 PSASPQSHSHRVCEE-QLLKEYELAHNAFFTDPNDQSAWFYYRWLLG-RAEREEMIS 261
Score = 85 (35.0 bits), Expect = 5.3e-61, Sum P(3) = 5.3e-61
Identities = 29/109 (26%), Positives = 48/109 (44%)
Query: 417 KLTH-CSLSSLHVFPHLPSLESLDVSHNAPNIILCVYFQSLKLTHCSLSSLHVFPHLPSL 475
KLT C L L + H+ +L S + P + + L+ ++ SL HLP L
Sbjct: 465 KLTTLCHLDQLLLVTHI-NLSSNQLQRLPPQFSMLQCLEVLEADDNAIESLEGLYHLPKL 523
Query: 476 ESLDVSHNAIDHIED-SVFAKYEACVQVILTGNPV-SADMVVKHCTLVV 522
E + + +N I + D A ++ L GNPV D + +L++
Sbjct: 524 EEVSLKNNKICKVSDLETLATCTKLTRLDLRGNPVHKTDDLESELSLIL 572
Score = 80 (33.2 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 34/131 (25%), Positives = 56/131 (42%)
Query: 112 VLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYV-----TDRHK--VAPL--KELN 162
VL S + E+ L+L L + W+YRR V T R K V L EL+
Sbjct: 35 VLKKRSAGEHDEEALDLTQQLLSSNPDFATLWNYRREVLLHLETLREKDEVQKLYESELH 94
Query: 163 YSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQDKYVNEFSMVESAVFTEPKDQS 222
+ ++ N +Y WH+RS + N LP Q + E + + + + ++
Sbjct: 95 FIEACLKVNPKSYGCWHHRSWV--------NTRLP--QPDWTRELGLCDRCLSLDERNFH 144
Query: 223 AWFYQRWLLGE 233
W Y+R ++ E
Sbjct: 145 CWDYRRLVVKE 155
Score = 78 (32.5 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
Identities = 30/138 (21%), Positives = 58/138 (42%)
Query: 28 METIFEKRKNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDR 87
+ET+ EK + Q+ + L L+ P W++R V L + + R
Sbjct: 76 LETLREKDEVQKLYESELHFIEACLKVNPKSYGCWHHRSWV----NTRLPQPDW----TR 127
Query: 88 ELKLTKDCLLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRR 147
EL L CL +++ W R V+ + E+EL+ + + + N+ W YR
Sbjct: 128 ELGLCDRCLSLDERNFHCWDYRRLVVKE--SGVSVEQELQFTDRLIGSNFSNYSSWHYRS 185
Query: 148 YVTDRHKVAPLKELNYST 165
+ + + P+ + ++T
Sbjct: 186 TLLPQLRPQPVLDSAHNT 203
Score = 46 (21.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 116 ISRAPNYEKELELCNYYLELDERNFHC 142
+ ++ + EL+ CN L+L+ +N C
Sbjct: 371 VEKSSVLQAELQSCNQLLDLEPQNKWC 397
Score = 40 (19.1 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 124 KELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYST---EKIEANFS 173
KE EL + D + W Y R++ R + + Y++ E++ FS
Sbjct: 225 KEYELAHNAFFTDPNDQSAWFYYRWLLGRAEREEMISCVYASREGERVSVAFS 277
Score = 39 (18.8 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 12/52 (23%), Positives = 19/52 (36%)
Query: 87 RELKLTKDCLLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDER 138
+E +L + P WF ++L R +E+ C Y ER
Sbjct: 225 KEYELAHNAFFTDPNDQSAWFYYRWLLGRAER-----EEMISCVYASREGER 271
>RGD|621697 [details] [associations]
symbol:Rabggta "Rab geranylgeranyltransferase, alpha subunit"
species:10116 "Rattus norvegicus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=ISO;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=ISO;IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR002088 InterPro:IPR009087
Pfam:PF01239 Pfam:PF07711 ProDom:PD331837 PROSITE:PS51147
RGD:621697 GO:GO:0046872 GO:GO:0008270 eggNOG:COG5536 GO:GO:0018344
GO:GO:0004663 CTD:5875 GeneTree:ENSGT00550000075121
HOGENOM:HOG000007845 HOVERGEN:HBG002171 KO:K14050 OrthoDB:EOG4FXR7F
Gene3D:2.60.40.1130 SUPFAM:SSF49594 EMBL:L10415 EMBL:S62096
EMBL:BC086547 IPI:IPI00231284 PIR:A45977 RefSeq:NP_113842.1
UniGene:Rn.29434 PDB:1DCE PDB:1LTX PDB:3C72 PDB:3DSS PDB:3DST
PDB:3DSU PDB:3DSV PDB:3DSW PDB:3DSX PDB:3HXB PDB:3HXC PDB:3HXD
PDB:3HXE PDB:3HXF PDB:4EHM PDB:4GTS PDB:4GTT PDB:4GTV PDBsum:1DCE
PDBsum:1LTX PDBsum:3C72 PDBsum:3DSS PDBsum:3DST PDBsum:3DSU
PDBsum:3DSV PDBsum:3DSW PDBsum:3DSX PDBsum:3HXB PDBsum:3HXC
PDBsum:3HXD PDBsum:3HXE PDBsum:3HXF PDBsum:4EHM PDBsum:4GTS
PDBsum:4GTT PDBsum:4GTV ProteinModelPortal:Q08602 SMR:Q08602
DIP:DIP-6137N STRING:Q08602 PRIDE:Q08602 Ensembl:ENSRNOT00000048455
GeneID:58983 KEGG:rno:58983 UCSC:RGD:621697 InParanoid:Q08602
EvolutionaryTrace:Q08602 NextBio:611680 Genevestigator:Q08602
GermOnline:ENSRNOG00000030483 Uniprot:Q08602
Length = 567
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 181/550 (32%), Positives = 273/550 (49%)
Query: 1 MHGRKKESVSVQ--EAKK--RSAKVKWYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIP 56
MHGR K S + EAK+ R K+K Y + + +F+KR+ E D+ L LTS++L P
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANP 60
Query: 57 DINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHI 116
D +LWN R+EVL H++ + EE LV EL + CL PKSYGTW RC++L +
Sbjct: 61 DFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRL 120
Query: 117 SRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEANFSNYS 176
PN+ +ELELC +LE DERNFHCWDYRR+V + VAP +EL ++ I NFSNYS
Sbjct: 121 PE-PNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYS 179
Query: 177 AWHYRSKLLPLLYPDPNN----HLPIEQDKYVNEFSMVESAVFTEPKDQSAWFYQRWLLG 232
+WHYRS LLP L+P P++ LP ++ + E +V++A FT+P DQSAWFY RWLLG
Sbjct: 180 SWHYRSCLLPQLHPQPDSGPQGRLP--ENVLLKELELVQNAFFTDPNDQSAWFYHRWLLG 237
Query: 233 ERTSPVQIISAGVLP--SGVTFVTFNQLVDLTS---TSQIKVDSNVL-MSWTSLNGASR- 285
R P ++ + V F++ + + S T + VD L + W + +G +R
Sbjct: 238 -RAEPHDVLCCVHVSREEACLSVCFSRPLTVGSRMGTLLLMVDEAPLSVEWRTPDGRNRP 296
Query: 286 SFIWVRFLLSLSCPYRNYISVALLTSITLLQH----LHPGSSDSNEIILKRFDLLKTLDP 341
S +W+ C + A L L QH + GS E +L LK
Sbjct: 297 SHVWL-------CD----LPAASLND-QLPQHTFRVIWTGSDSQKECVL-----LKDRPE 339
Query: 342 LRLNYYKDSESKYKIETFIQTNP-RANQITNLSSLQLTSIHHMHCFAHCKQVDLSNNPLT 400
E ++ E ++ + +++ + LQ + C + + +PL
Sbjct: 340 CWCRDSATDEQLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLL 399
Query: 401 --NNCLRHLTPLVACESLKLTHCS-LSSLHVFPH-LPSLESLDVS--HNAPN--IILCVY 452
L++ + L A + ++ + L S + + + +E DV H A +LC
Sbjct: 400 YEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLTVLCHL 459
Query: 453 FQSLKLTHCSLSS--LHVFPH----LPSLESLDVSHNAIDHIEDSVFAKYEACVQVILTG 506
Q L +TH LS L P L LE L S NA++++ D V A +++L
Sbjct: 460 EQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENV-DGV-ANLPRLQELLLCN 517
Query: 507 NPVSADMVVK 516
N + ++
Sbjct: 518 NRLQQSAAIQ 527
>UNIPROTKB|Q92696 [details] [associations]
symbol:RABGGTA "Geranylgeranyl transferase type-2 subunit
alpha" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] [GO:0018344 "protein geranylgeranylation"
evidence=IEA] [GO:0006464 "cellular protein modification process"
evidence=TAS] [GO:0007601 "visual perception" evidence=TAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002088
InterPro:IPR009087 Pfam:PF01239 Pfam:PF07711 ProDom:PD331837
PROSITE:PS51147 PROSITE:PS51450 GO:GO:0046872 GO:GO:0007601
GO:GO:0008270 EMBL:CH471078 GO:GO:0006464
Pathway_Interaction_DB:prlsignalingeventspathway eggNOG:COG5536
GO:GO:0018344 GO:GO:0004663 CTD:5875 HOGENOM:HOG000007845
HOVERGEN:HBG002171 KO:K14050 OMA:DFATLWN OrthoDB:EOG4FXR7F
Gene3D:2.60.40.1130 SUPFAM:SSF49594 EMBL:Y08200 EMBL:AK291347
EMBL:AK292613 EMBL:BC003093 IPI:IPI00022664 PIR:JC5538
RefSeq:NP_004572.3 RefSeq:NP_878256.1 UniGene:Hs.377992
ProteinModelPortal:Q92696 SMR:Q92696 STRING:Q92696
PhosphoSite:Q92696 DMDM:6093707 PaxDb:Q92696 PRIDE:Q92696
Ensembl:ENST00000216840 Ensembl:ENST00000399409 GeneID:5875
KEGG:hsa:5875 UCSC:uc001wof.3 GeneCards:GC14M024734 HGNC:HGNC:9795
HPA:HPA043488 MIM:601905 neXtProt:NX_Q92696 PharmGKB:PA34156
InParanoid:Q92696 BindingDB:Q92696 ChEMBL:CHEMBL5249
GenomeRNAi:5875 NextBio:22826 ArrayExpress:Q92696 Bgee:Q92696
CleanEx:HS_RABGGTA Genevestigator:Q92696 GermOnline:ENSG00000100949
Uniprot:Q92696
Length = 567
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 174/519 (33%), Positives = 263/519 (50%)
Query: 1 MHGRKKESVSVQ--EAKK--RSAKVKWYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIP 56
MHGR K S + EAK+ R K+K Y + + +F+KR+ E D+ L LTS++L P
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANP 60
Query: 57 DINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHI 116
D +LWN R+EVL ++ + EEL LV EL + CL PKSYGTW RC++L +
Sbjct: 61 DFATLWNCRREVLQQLETQKSPEELAALVKAELGFLESCLRVNPKSYGTWHHRCWLLGRL 120
Query: 117 SRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEANFSNYS 176
PN+ +ELELC +LE+DERNFHCWDYRR+V + V P +EL ++ I NFSNYS
Sbjct: 121 PE-PNWTRELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEELAFTDSLITRNFSNYS 179
Query: 177 AWHYRSKLLPLLYPDPNN----HLPIEQDKYVNEFSMVESAVFTEPKDQSAWFYQRWLLG 232
+WHYRS LLP L+P P++ LP +D + E +V++A FT+P DQSAWFY RWLLG
Sbjct: 180 SWHYRSCLLPQLHPQPDSGPQGRLP--EDVLLKELELVQNAFFTDPNDQSAWFYHRWLLG 237
Query: 233 ERTSPVQIISAGVLP--SGVTFVTFNQLVDLTSTSQIKV----DSNVLMSWTSLNGASR- 285
R P + + V+F++ + + S +I + DS +++ W + +G +R
Sbjct: 238 -RADPQDALRCLHVSRDEACLTVSFSRPLLVGSRMEILLLMVDDSPLIVEWRTPDGRNRP 296
Query: 286 SFIWVRFLLSLSCPYRNYISVALLTSITLLQHLHPGSSDSNEIILKRFDLLKTLDPLRLN 345
S +W+ C + A L L QH + ++ K LLK
Sbjct: 297 SHVWL-------CD----LPAASLND-QLPQHTFRVIWTAGDV-QKECVLLKGRQEGWCR 343
Query: 346 YYKDSESKYKIETFIQTNP-RANQITNLSSLQLTSIHHMHCFAHCKQVDLSNNPLT--NN 402
E ++ E ++ + +++ + LQ + C + + +PL
Sbjct: 344 DSTTDEQLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKE 403
Query: 403 CLRHLTPLVACESLKLTHCS-LSSLHVFPH-LPSLESLDVS--HNAPN--IILCVYFQSL 456
L++ L A + ++ T+ L S + + + +E +V H A +LC Q L
Sbjct: 404 TLQYFQTLKAVDPMRATYLDDLRSKFLLENSVLKMEYAEVRVLHLAHKDLTVLCHLEQLL 463
Query: 457 KLTHCSLSS--LHVFPH----LPSLESLDVSHNAIDHIE 489
+TH LS L P L LE L S NAI+ ++
Sbjct: 464 LVTHLDLSHNRLRTLPPALAALRCLEVLQASDNAIESLD 502
Score = 119 (46.9 bits), Expect = 0.00079, P = 0.00079
Identities = 43/141 (30%), Positives = 69/141 (48%)
Query: 308 LLTSITLLQHLHPGSSDSNEIILKRFDLLKTLDPLRLNYYKDSESKYKIETFIQTNPRAN 367
LLT I L++ L P + L+ F LK +DP+R Y D SK+ +E + A
Sbjct: 385 LLTIILLMRALDPLLYEKET--LQYFQTLKAVDPMRATYLDDLRSKFLLENSVLKMEYAE 442
Query: 368 -QITNLSSLQLTSIHHMHCFAHCKQVDLSNNPLTNNCLRHLTPLVA---C-ESLKLTHCS 422
++ +L+ LT + H+ +DLS+N L R L P +A C E L+ + +
Sbjct: 443 VRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRL-----RTLPPALAALRCLEVLQASDNA 497
Query: 423 LSSLHVFPHLPSLESLDVSHN 443
+ SL +LP L+ L + +N
Sbjct: 498 IESLDGVTNLPRLQELLLCNN 518
>UNIPROTKB|H0YLH3 [details] [associations]
symbol:RABGGTA "Geranylgeranyl transferase type-2 subunit
alpha" species:9606 "Homo sapiens" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0018342 "protein prenylation"
evidence=IEA] InterPro:IPR002088 InterPro:IPR009087 Pfam:PF01239
Pfam:PF07711 ProDom:PD331837 PROSITE:PS51147 GO:GO:0008270
EMBL:AL096870 GO:GO:0018342 GO:GO:0004663 Gene3D:2.60.40.1130
SUPFAM:SSF49594 HGNC:HGNC:9795 SMR:H0YLH3 Ensembl:ENST00000558376
Ensembl:ENST00000559974 Uniprot:H0YLH3
Length = 424
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 129/305 (42%), Positives = 185/305 (60%)
Query: 1 MHGRKKESVSVQ--EAKK--RSAKVKWYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIP 56
MHGR K S + EAK+ R K+K Y + + +F+KR+ E D+ L LTS++L P
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANP 60
Query: 57 DINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHI 116
D +LWN R+EVL ++ + EEL LV EL + CL PKSYGTW RC++L +
Sbjct: 61 DFATLWNCRREVLQQLETQKSPEELAALVKAELGFLESCLRVNPKSYGTWHHRCWLLGRL 120
Query: 117 SRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEANFSNYS 176
PN+ +ELELC +LE+DERNFHCWDYRR+V + V P +EL ++ I NFSNYS
Sbjct: 121 PE-PNWTRELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEELAFTDSLITRNFSNYS 179
Query: 177 AWHYRSKLLPLLYPDPNN----HLPIEQDKYVNEFSMVESAVFTEPKDQSAWFYQRWLLG 232
+WHYRS LLP L+P P++ LP +D + E +V++A FT+P DQSAWFY RWLLG
Sbjct: 180 SWHYRSCLLPQLHPQPDSGPQGRLP--EDVLLKELELVQNAFFTDPNDQSAWFYHRWLLG 237
Query: 233 ERTSPVQIISAGVLP--SGVTFVTFNQLVDLTSTSQIKV----DSNVLMSWTSLNGASR- 285
R P + + V+F++ + + S +I + DS +++ W + +G +R
Sbjct: 238 -RADPQDALRCLHVSRDEACLTVSFSRPLLVGSRMEILLLMVDDSPLIVEWRTPDGRNRP 296
Query: 286 SFIWV 290
S +W+
Sbjct: 297 SHVWL 301
>UNIPROTKB|F1MGN1 [details] [associations]
symbol:RABGGTA "Geranylgeranyl transferase type-2 subunit
alpha" species:9913 "Bos taurus" [GO:0018342 "protein prenylation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=IEA]
InterPro:IPR002088 InterPro:IPR009087 Pfam:PF01239 Pfam:PF07711
ProDom:PD331837 PROSITE:PS51147 GO:GO:0008270 GO:GO:0018342
GO:GO:0004663 GeneTree:ENSGT00550000075121 Gene3D:2.60.40.1130
SUPFAM:SSF49594 EMBL:DAAA02028027 IPI:IPI00689272
Ensembl:ENSBTAT00000036474 ArrayExpress:F1MGN1 Uniprot:F1MGN1
Length = 333
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 119/245 (48%), Positives = 157/245 (64%)
Query: 1 MHGRKKESVSVQ--EAKK--RSAKVKWYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIP 56
MHGR K S + EAK+ R K+K Y +T+F+KR+ E D+ L LTS++L P
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQAATQTVFQKRQAGELDESVLELTSQILGANP 60
Query: 57 DINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHI 116
D +LWN R+EVL ++ + EEL LV EL + CL PKSYGTW RC++L +
Sbjct: 61 DFATLWNCRREVLQQLEVQKSPEELATLVKAELGFLESCLRVNPKSYGTWHHRCWLLSRL 120
Query: 117 SRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEANFSNYS 176
PN+ +ELELC +LE+DERNFHCWDYRR+V + V P +EL ++ I NFSNYS
Sbjct: 121 PE-PNWARELELCARFLEVDERNFHCWDYRRFVAAQAAVPPAEELAFTDSLITRNFSNYS 179
Query: 177 AWHYRSKLLPLLYPDPNN----HLPIEQDKYVNEFSMVESAVFTEPKDQSAWFYQRWLLG 232
+WHYRS LLP L+P P++ LP +D + E +V++A FT+P DQSAWFY RWLLG
Sbjct: 180 SWHYRSCLLPQLHPQPDSGPQGRLP--EDVLLKELELVQNAFFTDPNDQSAWFYHRWLLG 237
Query: 233 ERTSP 237
R P
Sbjct: 238 -RADP 241
>FB|FBgn0037293 [details] [associations]
symbol:CG12007 species:7227 "Drosophila melanogaster"
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=ISS] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0008360
"regulation of cell shape" evidence=IMP] [GO:0018342 "protein
prenylation" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 EMBL:AE014297
GO:GO:0022008 GO:GO:0008360 GO:GO:0007155 eggNOG:COG5536
GO:GO:0018342 GO:GO:0004663 GeneTree:ENSGT00550000075121 KO:K14050
HSSP:Q08602 EMBL:AY058618 RefSeq:NP_649512.1 UniGene:Dm.4147
SMR:Q9VN77 IntAct:Q9VN77 MINT:MINT-917999
EnsemblMetazoa:FBtr0078842 GeneID:40617 KEGG:dme:Dmel_CG12007
UCSC:CG12007-RA FlyBase:FBgn0037293 InParanoid:Q9VN77 OMA:QRDRPMS
OrthoDB:EOG4H9W26 GenomeRNAi:40617 NextBio:819680 Uniprot:Q9VN77
Length = 515
Score = 473 (171.6 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 84/160 (52%), Positives = 110/160 (68%)
Query: 73 KATLAEEELHELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYY 132
K E++ H + EL LT+ CL+ PKSY W RC+ L+ RA ++++E++LCN Y
Sbjct: 109 KKAAGEDKAHSIFTCELDLTEQCLMVNPKSYNAWHHRCWTLEQNPRA-DWQQEVKLCNKY 167
Query: 133 LELDERNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDP 192
L+ DERNFH WDYRRYVT + V +EL++ TEKI ANFSNYS+WH+RS LLP LYP+
Sbjct: 168 LKFDERNFHTWDYRRYVTGKAMVPATQELDFCTEKIRANFSNYSSWHHRSLLLPELYPNQ 227
Query: 193 NNHLPIEQDKYVNEFSMVESAVFTEPKDQSAWFYQRWLLG 232
P+ ++K E MV +A FT+P D SAWFYQRWLLG
Sbjct: 228 QRDRPMSEEKLQKELEMVLTAAFTDPNDSSAWFYQRWLLG 267
Score = 165 (63.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 53/186 (28%), Positives = 89/186 (47%)
Query: 1 MHGRKKESVSVQEA---KKRSA-KVKWYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIP 56
MHGR K + +E KK A KV+ Y M I +KR+ E D+E LSLT ++L P
Sbjct: 1 MHGRVKVRTTEEERERKKKEQALKVRAYRAAMGRIQKKREAGELDNEMLSLTVQILLRNP 60
Query: 57 DINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHI 116
D++ LWN R+E +L L EEE E K K+ + K ++ D
Sbjct: 61 DVSMLWNIRRECVLEKLFRLKEEEATCETPSEEKPEKENQTGENKPSE---KKAAGEDKA 117
Query: 117 SRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLK-ELNYSTEKIEANFSNY 175
+ EL+L L ++ ++++ W +R + +++ A + E+ + ++ + N+
Sbjct: 118 HSI--FTCELDLTEQCLMVNPKSYNAWHHRCWTLEQNPRADWQQEVKLCNKYLKFDERNF 175
Query: 176 SAWHYR 181
W YR
Sbjct: 176 HTWDYR 181
Score = 59 (25.8 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 308 LLTSITLLQHLHPGSSDSNEIILKRFDLLKTLDPLRLNYYKDSESKYKIE 357
LLTS L++ + S ++E L L+ +D LR YYKD +++ +E
Sbjct: 404 LLTSALLMRAID--FSANHETSLAHLAKLEKVDFLREGYYKDLAARWTLE 451
>TAIR|locus:2121860 [details] [associations]
symbol:RGTA1 "RAB geranylgeranyl transferase alpha
subunit 1" species:3702 "Arabidopsis thaliana" [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008318 "protein prenyltransferase
activity" evidence=IEA] [GO:0018342 "protein prenylation"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR001611
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 PROSITE:PS51450
GO:GO:0005829 GO:GO:0046686 EMBL:CP002687 GO:GO:0008318
GO:GO:0018342 KO:K14050 HSSP:Q08602 EMBL:AY072209 EMBL:AY117358
IPI:IPI00528243 RefSeq:NP_001078443.1 RefSeq:NP_194180.2
UniGene:At.28080 ProteinModelPortal:Q8VYB7 SMR:Q8VYB7 PRIDE:Q8VYB7
EnsemblPlants:AT4G24490.1 EnsemblPlants:AT4G24490.2 GeneID:828551
KEGG:ath:AT4G24490 TAIR:At4g24490 HOGENOM:HOG000030513
InParanoid:Q8VYB7 OMA:KLAFQHN PhylomeDB:Q8VYB7
ProtClustDB:CLSN2686399 Genevestigator:Q8VYB7 Uniprot:Q8VYB7
Length = 678
Score = 380 (138.8 bits), Expect = 4.3e-48, Sum P(3) = 4.3e-48
Identities = 84/236 (35%), Positives = 124/236 (52%)
Query: 1 MHGRKKESVSVQEAKKRSAKVKWYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIPDINS 60
MHGR + + +E +AK +L ++ Y +EA+ L++++L P+ +
Sbjct: 1 MHGRPRNASKPEEEAASAAKAVQLRSLQSQFMTNHHDKIYTNEAIELSTKLLEINPEAYT 60
Query: 61 LWNYRKEVLLHMKATLAEEE--LHELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHISR 118
WNYRK + A + + + ++D EL++ + L KSYG W R +VL
Sbjct: 61 AWNYRKLAVEDRLARIEPDPNLVSAILDEELRVVESALRQNFKSYGAWHHRKWVLS--KG 118
Query: 119 APNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEANFSNYSAW 178
+ EL L + +LD RNFH W+YRR+V + + EL Y+ + I NFSNYSAW
Sbjct: 119 HSSVGNELRLLEKFQKLDSRNFHAWNYRRFVVELTNRSEQDELQYTDDMINNNFSNYSAW 178
Query: 179 HYRSKLLP-LLYPDPNNHLPIEQDKYVNEFSMVESAVFTEPKDQSAWFYQRWLLGE 233
H RS LL LL + + +P K E+ V SA+FTEP DQS WFY WLL +
Sbjct: 179 HNRSVLLSSLLAQNADGFMP--NIKIPEEYDFVHSAIFTEPDDQSGWFYHLWLLDQ 232
Score = 110 (43.8 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 32/98 (32%), Positives = 52/98 (53%)
Query: 147 RYVTDRH-KVAPLKELNYSTEKIEANFSNYSAWHYRSKL-----LPLLYPDPNNHLPIEQ 200
+++T+ H K+ + + ST+ +E N Y+AW+YR KL L + PDPN I
Sbjct: 30 QFMTNHHDKIYTNEAIELSTKLLEINPEAYTAWNYR-KLAVEDRLARIEPDPNLVSAILD 88
Query: 201 DKYVNEFSMVESAVFTEPKDQSAWFYQRWLLGERTSPV 238
+ E +VESA+ K AW +++W+L + S V
Sbjct: 89 E----ELRVVESALRQNFKSYGAWHHRKWVLSKGHSSV 122
Score = 102 (41.0 bits), Expect = 2.9e-41, Sum P(2) = 2.9e-41
Identities = 40/132 (30%), Positives = 63/132 (47%)
Query: 327 EIILKRFDLLKTLDPLRLNYYKDSESK---YKIETFIQTNPR-------ANQIT--NLSS 374
E IL+ ++ L LD YYKD SK +K+ + ++ R N + L++
Sbjct: 461 EEILQLYNDLMALDSSHYQYYKDEHSKAFLHKVTSSSESLSRHLLRYRDMNNLVCLRLNN 520
Query: 375 LQLTSIHHMHCFAHCKQVDLSNNPLTNNCLRHLTPLVACESLKLTHC---SLSSLHVFPH 431
L L+ I + + +DLS+N L + L++C L L+H S S+L H
Sbjct: 521 LSLSRIASVEKLLFVQMLDLSHNELHSTEGLEAMQLLSC--LNLSHNRIRSFSALDSLRH 578
Query: 432 LPSLESLDVSHN 443
+ L+ LDVSHN
Sbjct: 579 VKQLKVLDVSHN 590
Score = 97 (39.2 bits), Expect = 4.3e-48, Sum P(3) = 4.3e-48
Identities = 36/163 (22%), Positives = 69/163 (42%)
Query: 202 KYVNEFSMVESAVFTEPKDQSAWFYQRWLLGERTSPVQIISAGVLPSGVTFVTFNQLVDL 261
K E+ V SA+FTEP DQS WFY WLL + + + +L S ++ + + L
Sbjct: 201 KIPEEYDFVHSAIFTEPDDQSGWFYHLWLLDQTLN----VETPLLTS--SWPSHGSSIIL 254
Query: 262 TSTSQIKVDSNVLMSWTSLNGASRSFIWVRFLLSLSCPYRNYISVALLTSITLLQHLHPG 321
+ + S++ ++ S +G SF + + + + +++T+ L
Sbjct: 255 SGAGCLSGSSSMFTTFCSESG---SFPLILY-------FDQAVGGVSSSTVTIDSELKGN 304
Query: 322 SSDSNEIILKRFDLLKTLDPLRLNYYKDSESKYKIETFIQTNP 364
E I + + + RL Y +YK++ + +P
Sbjct: 305 EGLVWEPIPNKNSQVSCVWVARLKYVSSDPCEYKVKIRVGNSP 347
Score = 95 (38.5 bits), Expect = 4.3e-48, Sum P(3) = 4.3e-48
Identities = 41/129 (31%), Positives = 59/129 (45%)
Query: 373 SSLQLTSIHHMHCFAHCKQVDLSNNPLTNNCLRH--LTPLVACESLKLTHCSLSSLHVFP 430
S Q H F H +V S+ L+ + LR+ + LV C L+L + SLS +
Sbjct: 476 SHYQYYKDEHSKAFLH--KVTSSSESLSRHLLRYRDMNNLV-C--LRLNNLSLSRIASVE 530
Query: 431 HLPSLESLDVSHN----APNIILCVYFQSLKLTHC---SLSSLHVFPHLPSLESLDVSHN 483
L ++ LD+SHN + L L+H S S+L H+ L+ LDVSHN
Sbjct: 531 KLLFVQMLDLSHNELHSTEGLEAMQLLSCLNLSHNRIRSFSALDSLRHVKQLKVLDVSHN 590
Query: 484 AID-HIEDS 491
I H D+
Sbjct: 591 HIGKHSVDT 599
Score = 50 (22.7 bits), Expect = 2.1e-43, Sum P(3) = 2.1e-43
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 456 LKLTHCSLSSLHVFPHLPSLESLDVSHNAIDHIEDSVFAKYEACVQV 502
L+L + SLS + L ++ LD+SHN + E + +C+ +
Sbjct: 516 LRLNNLSLSRIASVEKLLFVQMLDLSHNELHSTEGLEAMQLLSCLNL 562
Score = 47 (21.6 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 25/128 (19%), Positives = 55/128 (42%)
Query: 278 TSLNGASRSFIWVRFLLSLSCPYRNYISVALLTSITLLQHLHPGSSDSNEI-ILKRFDLL 336
+S SR + R + +L C N +S++ + S+ L + NE+ + + +
Sbjct: 495 SSSESLSRHLLRYRDMNNLVCLRLNNLSLSRIASVEKLLFVQMLDLSHNELHSTEGLEAM 554
Query: 337 KTLDPLRLNYYKDSESKYKIETFIQTNPRANQITNLSSLQLTSIHHMHCFAHCKQVD--L 394
+ L L L++ + I +F + + ++ L++ + H H H L
Sbjct: 555 QLLSCLNLSHNR-------IRSF----SALDSLRHVKQLKVLDVSHNHIGKHSVDTTRYL 603
Query: 395 SNNPLTNN 402
++PL+N+
Sbjct: 604 CSSPLSNS 611
>WB|WBGene00019778 [details] [associations]
symbol:M57.2 species:6239 "Caenorhabditis elegans"
[GO:0008318 "protein prenyltransferase activity" evidence=IEA]
[GO:0018342 "protein prenylation" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0008219 "cell death" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] InterPro:IPR001611
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 PROSITE:PS51450
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008219 GO:GO:0040011
eggNOG:COG5536 GO:GO:0008318 GO:GO:0018342
GeneTree:ENSGT00550000075121 KO:K14050 HSSP:Q08602 EMBL:FO080120
PIR:T33742 RefSeq:NP_500367.1 ProteinModelPortal:Q9TYY0 SMR:Q9TYY0
STRING:Q9TYY0 PaxDb:Q9TYY0 EnsemblMetazoa:M57.2.1
EnsemblMetazoa:M57.2.2 EnsemblMetazoa:M57.2.3 GeneID:177113
KEGG:cel:CELE_M57.2 UCSC:M57.2.2 CTD:177113 WormBase:M57.2
HOGENOM:HOG000020498 InParanoid:Q9TYY0 OMA:WYQRAWV NextBio:895394
Uniprot:Q9TYY0
Length = 580
Score = 444 (161.4 bits), Expect = 4.7e-46, Sum P(2) = 4.7e-46
Identities = 110/305 (36%), Positives = 162/305 (53%)
Query: 7 ESVSVQEAKKRSAKVKWYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIPDINSLWNYRK 66
E + K+ + + + + ++ + I KR+ EYDDE LSLT +L DI + WN R+
Sbjct: 11 EEEKAAKQKEHTKRSQQFLHVRDKIVAKREKGEYDDEILSLTQAILEKNADIYTFWNIRR 70
Query: 67 EVL-LHMKATL-------AEEE--------LHELVDRELKLTKDCLLAQPKSYGTWFQRC 110
+ L M+A AEEE + L+ EL L+ +C+ + PKSY W+QR
Sbjct: 71 TTIELRMEANEKVQQSADAEEEEKTKSSQKIENLLAGELFLSYECIKSNPKSYSAWYQRA 130
Query: 111 YVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEA 170
+ L S AP+++KEL LC L+LD RNFHCWD+RR V K + +EL +S + I
Sbjct: 131 WALQRQS-APDFKKELALCEKALQLDCRNFHCWDHRRIVARMAKRSEAEELEFSNKLIND 189
Query: 171 NFSNYSAWHYRSKLLPLLYPDPNNHLP-IEQDKYVNEFSMVESAVFTEPKDQSAWFYQRW 229
NFSNYSAWHYRS L ++ D P I+ + +E V++A F + +DQSAW Y RW
Sbjct: 190 NFSNYSAWHYRSIALKNIHRDEKTGAPKIDDELIASELQKVKNAFFMDAEDQSAWTYTRW 249
Query: 230 LL--G--------ERTSPVQIISAGVLPSGVTFVTFNQLVDLTSTSQIKVDSNVLMSWTS 279
LL G E +P+++ISA + T V F++ V + VD+ W +
Sbjct: 250 LLEVGSGKEFLRPESHTPIELISASFHGNNTTLV-FSRAVTIQFLLTF-VDTENTTGWRA 307
Query: 280 LNGAS 284
+ S
Sbjct: 308 FSSTS 312
Score = 56 (24.8 bits), Expect = 4.7e-46, Sum P(2) = 4.7e-46
Identities = 46/180 (25%), Positives = 74/180 (41%)
Query: 309 LTSITLLQHLHPGSSDSNEIILKRFDLLKTLDPLRLNYYKDSESKYKIETFIQTN----- 363
+ ++ LL++ P S EII +L + LDP R YK S+ + I+
Sbjct: 396 MRTLVLLEY-QPIKS-YEEIIKNLENLSENLDPKRSELYKSLISRQNLNFSIREQFERIL 453
Query: 364 -PRANQITNLSSLQLTSIHHMHCFA-HCKQVDLSNNPLTNNCLRHLTPLVACESLKLTHC 421
P + +T S +LTS+ + A D S N L R + P + +SL +
Sbjct: 454 GPDTDWLTCRYS-KLTSLEGVEYLAGFVGSADFSGNRL-KEIQRIVLPNL--KSLTINEN 509
Query: 422 SLSSLHVFPHLPSLESLDVSHNAPNIILCV--YFQSLKLTHCSLSSLHVFPHLPSLESLD 479
+ SL P L L ++ + V +FQ++ SL L VF P +E +
Sbjct: 510 PIESLPPSPCLSHLTFFSIAGTQIASVSAVMPFFQTIP----SLDRL-VFCETPLVEKTE 564
Score = 42 (19.8 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 472 LPSLESLDVSHNAIDHIEDS 491
LP+L+SL ++ N I+ + S
Sbjct: 498 LPNLKSLTINENPIESLPPS 517
>DICTYBASE|DDB_G0269570 [details] [associations]
symbol:rabggta "protein geranylgeranyltransferase
type II" species:44689 "Dictyostelium discoideum" [GO:0018342
"protein prenylation" evidence=IEA] [GO:0008318 "protein
prenyltransferase activity" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA;ISS] [GO:0018344
"protein geranylgeranylation" evidence=ISS] [GO:0005968
"Rab-protein geranylgeranyltransferase complex" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0004659 "prenyltransferase
activity" evidence=IEA] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 dictyBase:DDB_G0269570 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0046872 eggNOG:COG5536
GO:GO:0018344 GO:GO:0004663 KO:K14050 RefSeq:XP_646077.2
HSSP:Q08602 ProteinModelPortal:Q55DQ4 STRING:Q55DQ4
EnsemblProtists:DDB0233950 GeneID:8617027 KEGG:ddi:DDB_G0269570
OMA:FPKCYWI ProtClustDB:CLSZ2501688 GO:GO:0005968 Uniprot:Q55DQ4
Length = 311
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 106/320 (33%), Positives = 172/320 (53%)
Query: 1 MHGRKKESVSVQEAK----KRSAKVKWYHNLMETIFEKRKNQE--YDDEALSLTSEVLRN 54
MHG K S ++AK K K++ Y+ L+++ E R+ Q YD+ +LS++ VL
Sbjct: 1 MHGVLKVRTSEEKAKAQRLKELEKIESYNKLVKSFEELREKQNGRYDEISLSVSKLVLIE 60
Query: 55 IPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCLLAQPKSYGTWFQRCYVLD 114
P+ ++WNYR+ +L T EL + E+K ++C+ KSY WF R ++
Sbjct: 61 NPEFYTIWNYRRLAILQFTETKENSELQVIYQNEMKFLEECIQRFTKSYWIWFHRQWIAL 120
Query: 115 HISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEANFSN 174
+ ++E+E++LC L D RNFHCW +RR++ + EL Y+TEK+E NFSN
Sbjct: 121 RMDNC-DWEREMKLCTKLLNFDLRNFHCWGHRRFILKHSNIKLEDELKYTTEKVEQNFSN 179
Query: 175 YSAWHYRSKLLPLLYPDPNNHLPIEQDKYVNEFSMVESAVFTEPKDQSAWFYQRWLLGER 234
YSAWH RS +LP +Y +P L +K + EF +V +AV+TEPKD S+W Y +WL+
Sbjct: 180 YSAWHQRSSILPKIYKEPEQLL----EKILEEFELVRNAVYTEPKDSSSWIYHKWLVATI 235
Query: 235 TSPVQIISAGVLPSGVTFVTFNQLVDLTSTSQIKVDSNVLMSWTSLNGASRSFIW--VRF 292
S VL + +T + L++L + + + +L+ + G + + +
Sbjct: 236 KSIPNSNYIEVLKNELTQIY--DLIELEPDCKWPIYTTLLLK-IEIGGFEKQELLDIISQ 292
Query: 293 LLSLSCPYRNYISVALLTSI 312
L+ L ++NY +L T I
Sbjct: 293 LIKLDPDHKNYYK-SLETKI 311
>POMBASE|SPCC1620.05 [details] [associations]
symbol:SPCC1620.05 "Rab geranylgeranyltransferase alpha
subunit (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005968 "Rab-protein geranylgeranyltransferase
complex" evidence=ISO] [GO:0006612 "protein targeting to membrane"
evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0018344 "protein geranylgeranylation"
evidence=ISO] [GO:0032153 "cell division site" evidence=IDA]
[GO:0044732 "mitotic spindle pole body" evidence=IDA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 PomBase:SPCC1620.05
GO:GO:0005829 GO:GO:0005634 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0032153 GO:GO:0044732 GO:GO:0006612 GO:GO:0006888
eggNOG:COG5536 GO:GO:0018344 GO:GO:0004663 KO:K14050 HSSP:Q08602
OMA:FPKCYWI GO:GO:0005968 PIR:T41035 RefSeq:NP_588463.1
ProteinModelPortal:O94412 STRING:O94412 EnsemblFungi:SPCC1620.05.1
GeneID:2539343 KEGG:spo:SPCC1620.05 HOGENOM:HOG000190796
OrthoDB:EOG454D7T NextBio:20800508 Uniprot:O94412
Length = 344
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 89/245 (36%), Positives = 134/245 (54%)
Query: 1 MHGRKKESVSVQE----AKKRSAKVKWYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIP 56
MHG + +S ++ A+K AK++ Y L+ E RK ++Y + L LT+E+L P
Sbjct: 1 MHGILRVKLSEEQRKLKAEKERAKIEEYRGLVSRFQEARKRKDYSEGNLKLTTELLDWNP 60
Query: 57 DINSLWNYRKEVLLH-MKATLAEEELHELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDH 115
+ S+WNYR+E+LL+ + ++ E +L+D ELK + PK Y + R + L++
Sbjct: 61 ETYSVWNYRREILLNDVFPKISLNEKQDLLDNELKYVLSKMKVFPKVYWIFNHRRWCLEN 120
Query: 116 ISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVA-----PLKELNYSTEKIEA 170
+ PN+ E+ + L D RNFH W YRRYV + + A KE+ Y+T I
Sbjct: 121 -APYPNWNYEMMITEKLLSADARNFHGWHYRRYVVSQIERAGNCSLAKKEMEYTTSAIAT 179
Query: 171 NFSNYSAWHYRSKLLPL---LYPDPNNHLPIEQDKYVNEFSMVESAVFTEPKDQSAWFYQ 227
NFSN+SA H R+KL+ L DPN+ + + E M+ AVFT+P D S W Y
Sbjct: 180 NFSNFSALHNRTKLIETILNLEADPNSQKALAKQILEQELDMIHQAVFTDPDDSSVWIYH 239
Query: 228 RWLLG 232
RWL+G
Sbjct: 240 RWLMG 244
>SGD|S000003568 [details] [associations]
symbol:BET4 "Alpha subunit of Type II
geranylgeranyltransferase" species:4932 "Saccharomyces cerevisiae"
[GO:0006612 "protein targeting to membrane" evidence=IMP]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IMP]
[GO:0004659 "prenyltransferase activity" evidence=IEA] [GO:0005968
"Rab-protein geranylgeranyltransferase complex" evidence=IDA;IPI]
[GO:0018342 "protein prenylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=IMP;IDA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA;IDA] [GO:0008318
"protein prenyltransferase activity" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 SGD:S000003568
EMBL:U14132 EMBL:BK006943 GO:GO:0006612 GO:GO:0006888
eggNOG:COG5536 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00550000075121 KO:K14050 OMA:FPKCYWI GO:GO:0005968
HOGENOM:HOG000190796 OrthoDB:EOG454D7T EMBL:Z49307 PIR:S48301
RefSeq:NP_012503.2 ProteinModelPortal:Q00618 SMR:Q00618
DIP:DIP-4994N IntAct:Q00618 MINT:MINT-568965 STRING:Q00618
PaxDb:Q00618 EnsemblFungi:YJL031C GeneID:853421 KEGG:sce:YJL031C
CYGD:YJL031c NextBio:973945 Genevestigator:Q00618
GermOnline:YJL031C Uniprot:Q00618
Length = 327
Score = 348 (127.6 bits), Expect = 1.5e-31, P = 1.5e-31
Identities = 83/243 (34%), Positives = 128/243 (52%)
Query: 1 MHGRKKESVSVQEAKKRSA----KVKWYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIP 56
MHG K++ + + +++ K+ Y +L E + R + Y EAL TSE+L P
Sbjct: 1 MHGIKRKQWTKELLRQKRVQDEKKIYDYRSLTENVLNMRDEKIYSIEALKKTSELLEKNP 60
Query: 57 DINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHI 116
+ N++WNYR++++ A+LA E D+EL L PK Y W R +VL H
Sbjct: 61 EFNAIWNYRRDII----ASLASELEIPFWDKELVFVMMLLKDYPKVYWIWNHRLWVLKHY 116
Query: 117 -SRAPN-YEKELELCNYYLELDERNFHCWDYRRYVTDR-----HKVAPLKELNYSTEKIE 169
+ +P ++ EL + N LE D RN+H W YRR V +K +E Y+T KI
Sbjct: 117 PTSSPKVWQTELAVVNKLLEQDARNYHGWHYRRIVVGNIESITNKSLDKEEFEYTTIKIN 176
Query: 170 ANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQDKYVN-EFSMVESAVFTEPKDQSAWFYQR 228
N SNYSAWH R +++ ++ Q +Y+ E S + +A+FT+ +DQS WFY +
Sbjct: 177 NNISNYSAWHQRVQIISRMFQKGEVG---NQKEYIRTEISYIINAMFTDAEDQSVWFYIK 233
Query: 229 WLL 231
W +
Sbjct: 234 WFI 236
>TAIR|locus:2153015 [details] [associations]
symbol:RGTA2 "RAB geranylgeranyl transferase alpha
subunit 2" species:3702 "Arabidopsis thaliana" [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008318 "protein prenyltransferase
activity" evidence=IEA] [GO:0018342 "protein prenylation"
evidence=IEA] InterPro:IPR001611 InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 PROSITE:PS51450 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB016871 eggNOG:COG5536
GO:GO:0008318 GO:GO:0018342 HSSP:Q08602 HOGENOM:HOG000030513
ProtClustDB:CLSN2686399 IPI:IPI00539643 RefSeq:NP_198997.1
UniGene:At.55309 ProteinModelPortal:Q9FJ32 SMR:Q9FJ32 PaxDb:Q9FJ32
PRIDE:Q9FJ32 EnsemblPlants:AT5G41820.1 GeneID:834187
KEGG:ath:AT5G41820 TAIR:At5g41820 InParanoid:Q9FJ32 OMA:IYSAWHY
PhylomeDB:Q9FJ32 Genevestigator:Q9FJ32 Uniprot:Q9FJ32
Length = 687
Score = 325 (119.5 bits), Expect = 3.3e-31, Sum P(2) = 3.3e-31
Identities = 86/256 (33%), Positives = 131/256 (51%)
Query: 1 MHGRKKESVSVQEAKKRSAKVKWYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIPDINS 60
MHGRK+E E + +AK +L + Y EA+ L++++L P+ +
Sbjct: 1 MHGRKREEDPNPE--ETAAKALELRSLQSQFMSNHHQKIYTKEAIQLSAKLLITNPEFYT 58
Query: 61 LWNYRKEVLLHMKATLAEEEL-HELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHISRA 119
WNY K ++ L + ++D EL + ++ L KSYG W+ R +VL
Sbjct: 59 AWNYPKLAFESRLDEDSDPSLVNSIIDEELGVVQNALERNVKSYGAWYHRKWVLSKKGHY 118
Query: 120 -PNYEKELELCNYYLEL------DE------RNFHCWDYRRYVTDRHKVAPLKELNYSTE 166
P+ E EL+L N Y + DE RNFH W+YRR+V + K + EL Y+T+
Sbjct: 119 YPSLENELQLLNDYQKQAHQKQDDEKQDDPSRNFHAWNYRRFVVELTKTSEEDELQYTTD 178
Query: 167 KI-EANFSNYSAWHYRSKLLP-LLYPDPNNHLPIEQDKYVNEFSMVESAVFTEPKDQSAW 224
I + +F+ YSAWHYRS L+ L+ + +P E + E V SA+FT + QS W
Sbjct: 179 MISDISFTIYSAWHYRSVLVSSLVAKKADGFMPKETIR--RELDYVHSAIFTLEEKQSGW 236
Query: 225 FYQRWLLGERTSPVQI 240
FY WLL ++T ++I
Sbjct: 237 FYYLWLL-DQTVKMEI 251
Score = 86 (35.3 bits), Expect = 3.3e-31, Sum P(2) = 3.3e-31
Identities = 49/192 (25%), Positives = 77/192 (40%)
Query: 309 LTSITLLQHLHPGSSDSNEIILKRFDLLKTLDPLRLNYYKDSESKYKIETFIQTNPRANQ 368
L S+T L + G + I +L +TL ++ + ET I +
Sbjct: 417 LNSLTAL-NADTGFEWRKKAIKIEIELFRTLPDSKIGKLILARLLMAEETMISNGVHYKE 475
Query: 369 ITNLSS--LQLTSIHHM-----HCFAHCKQVDLSNNPLTNNCLRHLTPL-VACESLKLTH 420
I L + + L S H+ H A +V ++ + R+ + C L+L +
Sbjct: 476 ILQLYNDLMALDSWHNQYYKDEHSVALIHKVTSRTESMSRHLFRYRNMNNIIC--LRLNN 533
Query: 421 CSLSSLHVFPHLPSLESLDVSHN----APNIILCVYFQSLKLTHC---SLSSLHVFPHLP 473
+LS + L ++ LD+SHN A + L L+H S S+L HL
Sbjct: 534 LTLSRIAAVEKLLFVQMLDLSHNELHSAEGLEAMQLLCCLNLSHNRIRSFSALDSLRHLK 593
Query: 474 SLESLDVSHNAI 485
L LDVSHN I
Sbjct: 594 QLRVLDVSHNHI 605
Score = 50 (22.7 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 446 NIILCVYFQSLKLTHCSLSSLHVFPHLPSLESLDVSHNAIDHIEDSVFAKYEAC 499
N I+C L+L + +LS + L ++ LD+SHN + H + + A C
Sbjct: 524 NNIIC-----LRLNNLTLSRIAAVEKLLFVQMLDLSHNEL-HSAEGLEAMQLLC 571
>ASPGD|ASPL0000044135 [details] [associations]
symbol:AN1981 species:162425 "Emericella nidulans"
[GO:0006612 "protein targeting to membrane" evidence=IEA]
[GO:0018344 "protein geranylgeranylation" evidence=IEA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=IEA] [GO:0004663
"Rab geranylgeranyltransferase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005968
"Rab-protein geranylgeranyltransferase complex" evidence=IEA]
[GO:0032153 "cell division site" evidence=IEA] InterPro:IPR002088
Pfam:PF01239 PROSITE:PS51147 EMBL:BN001307 eggNOG:COG5536
GO:GO:0008318 GO:GO:0018342 KO:K14050 OMA:FPKCYWI
HOGENOM:HOG000190796 OrthoDB:EOG454D7T EMBL:AACD01000030
RefSeq:XP_659585.1 ProteinModelPortal:Q5BBU9 STRING:Q5BBU9
EnsemblFungi:CADANIAT00008643 GeneID:2874880 KEGG:ani:AN1981.2
Uniprot:Q5BBU9
Length = 359
Score = 206 (77.6 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 62/202 (30%), Positives = 99/202 (49%)
Query: 2 HGRKKESV--SVQEAKKRSA-KVKWYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIPDI 58
HG + S + E +++ K++ Y L + E+ N++Y E L SE+L+ P+
Sbjct: 4 HGIPRHSSLEATGETRQQELRKIETYRQLEYVVREEIMNRKYTPETLQKLSELLKKNPEY 63
Query: 59 NSLWNYRKEVLLH-MKATLAE-------EELHELVDRELKLTKDCLLAQPKSYGTWFQRC 110
++WNYR+ VLLH + E E + L+ +L+ L + PK Y W R
Sbjct: 64 YTMWNYRRRVLLHEFSQAVPELPSETDIERITTLIQTDLQFLIPLLRSFPKCYWIWNYRL 123
Query: 111 YVLDHISRA-PN------YEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNY 163
++LD R P +++EL L L LD RNFH W YRR+V V L+ L+
Sbjct: 124 WLLDEAKRLLPKAIARKVWQQELALVGKMLNLDSRNFHGWGYRRFV-----VETLERLS- 177
Query: 164 STEKIEANFSNYSAWHYRSKLL 185
S E+ E + + S + Y K++
Sbjct: 178 SDEENEKSLTE-SEFEYAKKMI 198
Score = 179 (68.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 43/122 (35%), Positives = 64/122 (52%)
Query: 122 YEKELELCNYYLELDERNFHCWDYRRYVTD----------RHKVAPLKELNYSTEKIEAN 171
+++EL L L LD RNFH W YRR+V + K E Y+ + I N
Sbjct: 142 WQQELALVGKMLNLDSRNFHGWGYRRFVVETLERLSSDEENEKSLTESEFEYAKKMIGTN 201
Query: 172 FSNYSAWHYRSKLLPLLYPDPNNHLPIEQDKYV--NEFSMVESAVFTEPKDQSAWFYQRW 229
SN+SAWHYR+KL+ L + + E+ K + +E ++ A+ +P DQS WFY +
Sbjct: 202 LSNFSAWHYRTKLIQRLLSEKS--ASDEERKQILDDELELIHRAL-CDPYDQSLWFYHQN 258
Query: 230 LL 231
L+
Sbjct: 259 LM 260
Score = 39 (18.8 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 322 SSDSNEIILKRFDLLKTLDPLRLNYYKDSE 351
+ D +L LK LDPLR + + E
Sbjct: 325 NEDQKTRVLDWLSELKKLDPLRAGRWLELE 354
>SGD|S000001502 [details] [associations]
symbol:RAM2 "Alpha subunit of farnesyltransferase and
geranylgeranyltransferase" species:4932 "Saccharomyces cerevisiae"
[GO:0004660 "protein farnesyltransferase activity"
evidence=IEA;IDA] [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IEA;IDA] [GO:0005965
"protein farnesyltransferase complex" evidence=IDA] [GO:0004659
"prenyltransferase activity" evidence=IEA] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IDA]
[GO:0007323 "peptide pheromone maturation" evidence=IDA]
[GO:0018343 "protein farnesylation" evidence=IDA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0004661 "protein
geranylgeranyltransferase activity" evidence=IDA] [GO:0008318
"protein prenyltransferase activity" evidence=IEA] [GO:0018342
"protein prenylation" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=IDA] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 SGD:S000001502 EMBL:BK006944 GO:GO:0018343
GO:GO:0007323 eggNOG:COG5536 HOGENOM:HOG000188957 KO:K05955
OMA:FNNSAWN GO:GO:0005953 GO:GO:0005965 GO:GO:0004662 GO:GO:0004660
GO:GO:0018344 GeneTree:ENSGT00550000074935 OrthoDB:EOG43NBNJ
EMBL:M88584 EMBL:Z28019 EMBL:L24760 PIR:A41626 RefSeq:NP_012906.3
RefSeq:NP_012907.3 ProteinModelPortal:P29703 SMR:P29703
DIP:DIP-1233N IntAct:P29703 MINT:MINT-396243 STRING:P29703
PaxDb:P29703 EnsemblFungi:YKL019W GeneID:853849 GeneID:853851
KEGG:sce:YKL018W KEGG:sce:YKL019W CYGD:YKL019w KO:K14962
BindingDB:P29703 ChEMBL:CHEMBL2406 NextBio:975076
Genevestigator:P29703 GermOnline:YKL019W Uniprot:P29703
Length = 316
Score = 197 (74.4 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 51/190 (26%), Positives = 93/190 (48%)
Query: 39 EYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCLLA 98
E AL LT+E++ P ++WNYR ++ HM + + L+ +++EL + L
Sbjct: 46 ELSPRALQLTAEIIDVAPAFYTIWNYRFNIVRHMMSESEDTVLY--LNKELDWLDEVTLN 103
Query: 99 QPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPL 158
PK+Y W R +L + +P++++EL + ++ D +N+H W YR++
Sbjct: 104 NPKNYQIWSYRQSLLK-LHPSPSFKRELPILKLMIDDDSKNYHVWSYRKWCCLFFSDFQ- 161
Query: 159 KELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQDKYVNEFSMVESAVFTEP 218
EL Y+++ IE + N SAW +R + Y N I + + +E + + P
Sbjct: 162 HELAYASDLIETDIYNNSAWTHR-----MFYW-VNAKDVISKVELADELQFIMDKIQLVP 215
Query: 219 KDQSAWFYQR 228
++ S W Y R
Sbjct: 216 QNISPWTYLR 225
>DICTYBASE|DDB_G0283053 [details] [associations]
symbol:fntA "protein prenyltransferase alpha subunit"
species:44689 "Dictyostelium discoideum" [GO:0018342 "protein
prenylation" evidence=IEA] [GO:0008318 "protein prenyltransferase
activity" evidence=IEA] [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IEA] [GO:0004660
"protein farnesyltransferase activity" evidence=IEA;ISS]
[GO:0018343 "protein farnesylation" evidence=ISS] [GO:0005965
"protein farnesyltransferase complex" evidence=ISS] [GO:0016740
"transferase activity" evidence=IEA] [GO:0004659 "prenyltransferase
activity" evidence=IEA] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 dictyBase:DDB_G0283053 GenomeReviews:CM000153_GR
EMBL:AAFI02000049 GO:GO:0018343 eggNOG:COG5536 KO:K05955
GO:GO:0005965 GO:GO:0004662 GO:GO:0004660 RefSeq:XP_639262.1
HSSP:P49354 ProteinModelPortal:Q54RT9 STRING:Q54RT9
EnsemblProtists:DDB0237551 GeneID:8623832 KEGG:ddi:DDB_G0283053
OMA:HRRFIVE ProtClustDB:CLSZ2728981 Uniprot:Q54RT9
Length = 322
Score = 196 (74.1 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 55/204 (26%), Positives = 99/204 (48%)
Query: 36 KNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDC 95
K++E L L EV++ P ++W YR+EVL KA +E + + +E+ L D
Sbjct: 55 KSKEKSLRVLDLLEEVIQENPSNYTIWYYRREVL---KAIEQDETIEYDIQQEMNLLNDM 111
Query: 96 LLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKV 155
PK+Y W R ++++ + N EKE L LE D +N+H W +R+++ ++
Sbjct: 112 GETDPKNYQIWNHRRFIVEKYIGSDNKEKEF-LSGVLLE-DAKNYHAWSHRQWLLKTYRD 169
Query: 156 APLKELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQDKYVNEFSMVESAVF 215
EL + + + N S W++R ++ L P P P+ + EF+ + +
Sbjct: 170 WN-GELAMVDKLLSLDHRNNSVWNHRFFVISNLNPSP---FPLSLIEREVEFAF--NHIR 223
Query: 216 TEPKDQSAWFYQRWLL-GERTSPV 238
P ++S W Y + L G++ S +
Sbjct: 224 HSPNNESPWSYLKGLFKGQKISTI 247
Score = 137 (53.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 40/144 (27%), Positives = 71/144 (49%)
Query: 66 KEVLLHMKATLAEEELHELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHISRAPNYE-- 123
K+ + + +A L +E L R L L ++ + P +Y W+ R VL I + E
Sbjct: 44 KDKMNYFRAILKSKE-KSL--RVLDLLEEVIQENPSNYTIWYYRREVLKAIEQDETIEYD 100
Query: 124 --KELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEANFSNYSAWHYR 181
+E+ L N E D +N+ W++RR++ +++ + KE + + + + NY AW +R
Sbjct: 101 IQQEMNLLNDMGETDPKNYQIWNHRRFIVEKYIGSDNKEKEFLSGVLLEDAKNYHAWSHR 160
Query: 182 SKLLPLLYPDPNNHLPIEQDKYVN 205
LL Y D N L + DK ++
Sbjct: 161 QWLLKT-YRDWNGELAMV-DKLLS 182
Score = 51 (23.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 35/148 (23%), Positives = 61/148 (41%)
Query: 206 EFSMVESAVFTEPKDQSAWFYQRWLLGE-RTSPVQIISAGVLPSGVTFVTFNQLVDLTST 264
E +MV+ + + ++ S W ++ +++ SP + ++ V F FN
Sbjct: 173 ELAMVDKLLSLDHRNNSVWNHRFFVISNLNPSPFPL---SLIEREVEFA-FNH------- 221
Query: 265 SQIKVDSNVLMSWTSLNGASR----SFIWVRFLLSLSCPYRNYISVALLTSITLLQHLHP 320
I+ N W+ L G + S I+ L L YI + + SI L +
Sbjct: 222 --IRHSPNNESPWSYLKGLFKGQKISTIYPSLLDILLEMKSKYIGCSHVNSIILDIYQEQ 279
Query: 321 GSSDSNEIILKRFDLL-KTLDPLRLNYY 347
+ S E L LL +T+DP+ NY+
Sbjct: 280 NTKISLENSLNICKLLSETIDPIHKNYW 307
>GENEDB_PFALCIPARUM|PF14_0403 [details] [associations]
symbol:PF14_0403 "protein prenyltransferase
alpha subunit, putative" species:5833 "Plasmodium falciparum"
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002088
Pfam:PF01239 PROSITE:PS51147 EMBL:AE014187 GO:GO:0018342
GO:GO:0004663 RefSeq:XP_001348577.2 EnsemblProtists:PF14_0403:mRNA
GeneID:811985 KEGG:pfa:PF14_0403 EuPathDB:PlasmoDB:PF3D7_1442500
HOGENOM:HOG000282133 ProtClustDB:CLSZ2431921 Uniprot:Q8IL46
Length = 724
Score = 170 (64.9 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 105/470 (22%), Positives = 196/470 (41%)
Query: 46 SLTSEVLRNIPDINSLWNYRKEVLLH-MKATLAEEELHELVDRELKLTKDCLLAQPKSYG 104
++ ++L N LW ++ ++ + +K L + + +L++ EL+ K ++Y
Sbjct: 105 NMVEDILNTFNKCNELWFHKLWIIKYGLKDNLID--MKDLLN-ELEYCKRSFYKDDRNYH 161
Query: 105 TWFQRCYVLD--HI--SRAPNYEKE-LELCNYYLELDERNFHCWDYRRYVTDRHKVA--- 156
W R Y++ HI + N KE E LDE N ++ + T + +
Sbjct: 162 CWNYRSYIISCIHIIHKKLNNMNKENKENKEKEKNLDETNKTHQTHQTHQTIQSNQSNQS 221
Query: 157 ------PLKELNYSTEK--IEANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQDKYVNEFS 208
+ E NY K IE NFSN+SAW + L + D NN E +
Sbjct: 222 NGCFNFDVYETNYKLSKMLIENNFSNFSAWFLKYSLKKSII-DTNN-----------ELN 269
Query: 209 MVESAVFTEPKDQSAWFYQRWLLGERTSPVQIISAGVLPSGVTFVTFNQLVDLTSTSQIK 268
++++A+FT+P DQS W + +W L + + + I +L + ++ F L++L + I
Sbjct: 270 LIKNAIFTDPFDQSLWEFYKWFLFQNGNDKEEILFILLNNNTIYLFFPNLINLNISKCIC 329
Query: 269 VDSN---VLMSW-------TSLNGASRSFIWVRFLLSLSCPYRNYISVALLTSITLLQHL 318
D+N + SW + N + S F+ S + +NY+ + + I + +
Sbjct: 330 YDNNNKEIKGSWDKHIIKINNSNNINDSNNKESFVFSFTFD-KNYLLLGNIPYIKFVLYY 388
Query: 319 HPGSSDSNEIILKRFDLLKTLDPLRLNYYKDSESKYKIETFIQTNPRANQITNLSSLQLT 378
+ + I ++LK + L N K++ +KY+ Q + IT +S QL
Sbjct: 389 YKYNIYVPHQIHYEQNILKDIYRLYNNSSKEN-NKYEHSIIYQID-----ITKISKCQLF 442
Query: 379 SIHHMHCFAHCKQV-DLSNNPLTNN----CLRHLTPLVACESLKLTHCSLSSLHVFP-HL 432
+I + + K + SNN NN + + ++ L + LH+ L
Sbjct: 443 NILLDNNQYNRKGIYQFSNNIDDNNDQNKIYYNFYKYINSSNILLNISTNMDLHLLNLEL 502
Query: 433 PSLESLDVSHNAPNIILCVYFQSLKLTHCSLSSLHVFPHLPSLESLDVSH 482
+ L + N L F+ LK +L V +L ++ L + +
Sbjct: 503 EQINELLLLENDCKFALYTKFEILKRIEHFEEALKVLDYLKQVDFLRLEY 552
Score = 140 (54.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 46/164 (28%), Positives = 74/164 (45%)
Query: 1 MHGRKKESVSVQEAKKRSAKVKWYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIPDINS 60
MHGR+ +E + R KVK L+ + +K+K YD E + TS +L P + +
Sbjct: 1 MHGRRANRAQ-EEEQARLQKVKELIPLVNNLIKKKKTNNYDKEYIDRTSLILMKCPYLQT 59
Query: 61 LWNYRKEVLLHMKA----------------TLAEEELHELVDRELKLTKDCLLAQPKSYG 104
LWNYR+E ++K T EEL +++ E + +D L K
Sbjct: 60 LWNYRREYFEYIKPEYLKGKKEIEDEKCDMTKTSEELKKILKDENNMVEDILNTFNKCNE 119
Query: 105 TWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRY 148
WF + +++ + N +L N LE +R+F+ D R Y
Sbjct: 120 LWFHKLWIIKY-GLKDNLIDMKDLLNE-LEYCKRSFYK-DDRNY 160
Score = 111 (44.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 49/159 (30%), Positives = 78/159 (49%)
Query: 302 NYISVALLTSITLLQHLHPGSSDSNEIILKRFDLLKTLDPLRLNYYKDSES----KYKIE 357
N AL T +L+ + + E LK D LK +D LRL YYKD E+ K +I
Sbjct: 513 NDCKFALYTKFEILKRI-----EHFEEALKVLDYLKQVDFLRLEYYKDQETEILIKKRIH 567
Query: 358 TFIQTNPRAN--QITNLSSLQLTSIHH---MHCFAHCKQVDLSNNPL--------TNNCL 404
+ +T+ + N ++ +L+ + + SI + + F K +DLSNN + T N L
Sbjct: 568 DYYETSEKGNNNEMLDLTHMNIKSIIYPLMIEAFFILK-IDLSNNSISEGYNGKGTLNFL 626
Query: 405 RHLTPLVACESLKLTHCSLSSLHVFPHLPSLESLDVSHN 443
+L L + KL + +++ +L LE LDVS+N
Sbjct: 627 YNLREL-CLNNNKLKNFIFLMKNLY-NLKLLEKLDVSNN 663
Score = 49 (22.3 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 158 LKELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHL-PIEQDKYVNEFSMVES 212
L+EL + K++ NF Y KLL L NNHL +EQD EF ++ S
Sbjct: 629 LRELCLNNNKLK-NFIFLMKNLYNLKLLEKLDVS-NNHLVDMEQDLDQYEFVILPS 682
Score = 43 (20.2 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 449 LCVYFQSLKLTHCSLSSLHVFPHLPSLESLDVSHNAIDHIEDSVFAKYE 497
LC+ LK + +L+ +L LE LDVS+N + +E + +YE
Sbjct: 632 LCLNNNKLKNFIFLMKNLY---NLKLLEKLDVSNNHLVDMEQDL-DQYE 676
>UNIPROTKB|Q8IL46 [details] [associations]
symbol:PF14_0403 "Protein prenyltransferase alpha subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004663
"Rab geranylgeranyltransferase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 EMBL:AE014187 GO:GO:0018342 GO:GO:0004663
RefSeq:XP_001348577.2 EnsemblProtists:PF14_0403:mRNA GeneID:811985
KEGG:pfa:PF14_0403 EuPathDB:PlasmoDB:PF3D7_1442500
HOGENOM:HOG000282133 ProtClustDB:CLSZ2431921 Uniprot:Q8IL46
Length = 724
Score = 170 (64.9 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 105/470 (22%), Positives = 196/470 (41%)
Query: 46 SLTSEVLRNIPDINSLWNYRKEVLLH-MKATLAEEELHELVDRELKLTKDCLLAQPKSYG 104
++ ++L N LW ++ ++ + +K L + + +L++ EL+ K ++Y
Sbjct: 105 NMVEDILNTFNKCNELWFHKLWIIKYGLKDNLID--MKDLLN-ELEYCKRSFYKDDRNYH 161
Query: 105 TWFQRCYVLD--HI--SRAPNYEKE-LELCNYYLELDERNFHCWDYRRYVTDRHKVA--- 156
W R Y++ HI + N KE E LDE N ++ + T + +
Sbjct: 162 CWNYRSYIISCIHIIHKKLNNMNKENKENKEKEKNLDETNKTHQTHQTHQTIQSNQSNQS 221
Query: 157 ------PLKELNYSTEK--IEANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQDKYVNEFS 208
+ E NY K IE NFSN+SAW + L + D NN E +
Sbjct: 222 NGCFNFDVYETNYKLSKMLIENNFSNFSAWFLKYSLKKSII-DTNN-----------ELN 269
Query: 209 MVESAVFTEPKDQSAWFYQRWLLGERTSPVQIISAGVLPSGVTFVTFNQLVDLTSTSQIK 268
++++A+FT+P DQS W + +W L + + + I +L + ++ F L++L + I
Sbjct: 270 LIKNAIFTDPFDQSLWEFYKWFLFQNGNDKEEILFILLNNNTIYLFFPNLINLNISKCIC 329
Query: 269 VDSN---VLMSW-------TSLNGASRSFIWVRFLLSLSCPYRNYISVALLTSITLLQHL 318
D+N + SW + N + S F+ S + +NY+ + + I + +
Sbjct: 330 YDNNNKEIKGSWDKHIIKINNSNNINDSNNKESFVFSFTFD-KNYLLLGNIPYIKFVLYY 388
Query: 319 HPGSSDSNEIILKRFDLLKTLDPLRLNYYKDSESKYKIETFIQTNPRANQITNLSSLQLT 378
+ + I ++LK + L N K++ +KY+ Q + IT +S QL
Sbjct: 389 YKYNIYVPHQIHYEQNILKDIYRLYNNSSKEN-NKYEHSIIYQID-----ITKISKCQLF 442
Query: 379 SIHHMHCFAHCKQV-DLSNNPLTNN----CLRHLTPLVACESLKLTHCSLSSLHVFP-HL 432
+I + + K + SNN NN + + ++ L + LH+ L
Sbjct: 443 NILLDNNQYNRKGIYQFSNNIDDNNDQNKIYYNFYKYINSSNILLNISTNMDLHLLNLEL 502
Query: 433 PSLESLDVSHNAPNIILCVYFQSLKLTHCSLSSLHVFPHLPSLESLDVSH 482
+ L + N L F+ LK +L V +L ++ L + +
Sbjct: 503 EQINELLLLENDCKFALYTKFEILKRIEHFEEALKVLDYLKQVDFLRLEY 552
Score = 140 (54.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 46/164 (28%), Positives = 74/164 (45%)
Query: 1 MHGRKKESVSVQEAKKRSAKVKWYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIPDINS 60
MHGR+ +E + R KVK L+ + +K+K YD E + TS +L P + +
Sbjct: 1 MHGRRANRAQ-EEEQARLQKVKELIPLVNNLIKKKKTNNYDKEYIDRTSLILMKCPYLQT 59
Query: 61 LWNYRKEVLLHMKA----------------TLAEEELHELVDRELKLTKDCLLAQPKSYG 104
LWNYR+E ++K T EEL +++ E + +D L K
Sbjct: 60 LWNYRREYFEYIKPEYLKGKKEIEDEKCDMTKTSEELKKILKDENNMVEDILNTFNKCNE 119
Query: 105 TWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRY 148
WF + +++ + N +L N LE +R+F+ D R Y
Sbjct: 120 LWFHKLWIIKY-GLKDNLIDMKDLLNE-LEYCKRSFYK-DDRNY 160
Score = 111 (44.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 49/159 (30%), Positives = 78/159 (49%)
Query: 302 NYISVALLTSITLLQHLHPGSSDSNEIILKRFDLLKTLDPLRLNYYKDSES----KYKIE 357
N AL T +L+ + + E LK D LK +D LRL YYKD E+ K +I
Sbjct: 513 NDCKFALYTKFEILKRI-----EHFEEALKVLDYLKQVDFLRLEYYKDQETEILIKKRIH 567
Query: 358 TFIQTNPRAN--QITNLSSLQLTSIHH---MHCFAHCKQVDLSNNPL--------TNNCL 404
+ +T+ + N ++ +L+ + + SI + + F K +DLSNN + T N L
Sbjct: 568 DYYETSEKGNNNEMLDLTHMNIKSIIYPLMIEAFFILK-IDLSNNSISEGYNGKGTLNFL 626
Query: 405 RHLTPLVACESLKLTHCSLSSLHVFPHLPSLESLDVSHN 443
+L L + KL + +++ +L LE LDVS+N
Sbjct: 627 YNLREL-CLNNNKLKNFIFLMKNLY-NLKLLEKLDVSNN 663
Score = 49 (22.3 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 158 LKELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHL-PIEQDKYVNEFSMVES 212
L+EL + K++ NF Y KLL L NNHL +EQD EF ++ S
Sbjct: 629 LRELCLNNNKLK-NFIFLMKNLYNLKLLEKLDVS-NNHLVDMEQDLDQYEFVILPS 682
Score = 43 (20.2 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 449 LCVYFQSLKLTHCSLSSLHVFPHLPSLESLDVSHNAIDHIEDSVFAKYE 497
LC+ LK + +L+ +L LE LDVS+N + +E + +YE
Sbjct: 632 LCLNNNKLKNFIFLMKNLY---NLKLLEKLDVSNNHLVDMEQDL-DQYE 676
>POMBASE|SPAPB1A10.04c [details] [associations]
symbol:cwp1 "geranylgeranyltransferase I alpha subunit
Cwp1" species:4896 "Schizosaccharomyces pombe" [GO:0004660 "protein
farnesyltransferase activity" evidence=IEA] [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=IEA]
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005953 "CAAX-protein geranylgeranyltransferase
complex" evidence=NAS] [GO:0006612 "protein targeting to membrane"
evidence=IC] [GO:0018344 "protein geranylgeranylation" evidence=IC]
[GO:0034411 "cell wall (1->3)-beta-D-glucan biosynthetic process"
evidence=IPI] [GO:0004661 "protein geranylgeranyltransferase
activity" evidence=IDA] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 PomBase:SPAPB1A10.04c GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006612 GO:GO:0034411
eggNOG:COG5536 HOGENOM:HOG000188957 KO:K05955 OMA:FNNSAWN
GO:GO:0005953 GO:GO:0004662 GO:GO:0004660 GO:GO:0018344
GO:GO:0004663 EMBL:AJ223304 RefSeq:NP_593518.1
ProteinModelPortal:O60052 STRING:O60052
EnsemblFungi:SPAPB1A10.04c.1 GeneID:2543143 KEGG:spo:SPAPB1A10.04c
OrthoDB:EOG43NBNJ NextBio:20804170 Uniprot:O60052
Length = 294
Score = 189 (71.6 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 57/203 (28%), Positives = 100/203 (49%)
Query: 38 QEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCLL 97
+EY AL+LT ++ N P ++W YR ++L H + + + EL E +D ++ +D
Sbjct: 55 KEYSLRALNLTGFLIMNNPAHYTVWAYRFQILNHTPSYI-DNEL-EWLD---EIAEDF-- 107
Query: 98 AQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAP 157
K+Y W R +L S NYE+ELE E+D +N+H W YR ++
Sbjct: 108 --QKNYQVWHHRQKIL---SLTKNYERELEFTKKMFEIDSKNYHVWSYRVWILQNFNDYS 162
Query: 158 LKELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQDKYVNEFSMVESAVFTE 217
+EL + E +E + N SAW++R +L +E+ E + ++ +
Sbjct: 163 -QELKLTNELLEKDIYNNSAWNHRFYVL--FETSKVVSWSLEE-----ELNYLKDKILFA 214
Query: 218 PKDQSAWFYQRWLLGERTSPVQI 240
P +QSAW Y +L +++ P ++
Sbjct: 215 PDNQSAWNYLCGVL-DKSGPSKL 236
Score = 152 (58.6 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 54/195 (27%), Positives = 86/195 (44%)
Query: 40 YDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCLLAQ 99
Y D L E+ + +W++R+++L L + +REL+ TK
Sbjct: 92 YIDNELEWLDEIAEDFQKNYQVWHHRQKIL----------SLTKNYERELEFTKKMFEID 141
Query: 100 PKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYVT-DRHKVAPL 158
K+Y W R ++L + + +Y +EL+L N LE D N W++R YV + KV
Sbjct: 142 SKNYHVWSYRVWILQNFN---DYSQELKLTNELLEKDIYNNSAWNHRFYVLFETSKVVSW 198
Query: 159 ---KELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQDKYVNEFS--MVESA 213
+ELNY +KI N SAW+Y +L P ++L K + ++E
Sbjct: 199 SLEEELNYLKDKILFAPDNQSAWNYLCGVLDKSGPSKLDNLIANLRKNLPALHKPLLEFL 258
Query: 214 VFTEPKDQSAWFYQR 228
EP S YQ+
Sbjct: 259 AMYEPSS-SEEIYQK 272
>WB|WBGene00019823 [details] [associations]
symbol:fnta-1 species:6239 "Caenorhabditis elegans"
[GO:0008318 "protein prenyltransferase activity" evidence=IEA]
[GO:0018342 "protein prenylation" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
GO:GO:0009792 GO:GO:0002009 GO:GO:0040007 GO:GO:0018991
GO:GO:0002119 GO:GO:0010171 GO:GO:0040011 GO:GO:0040035
EMBL:FO081663 eggNOG:COG5536 HOGENOM:HOG000188957 KO:K05955
GO:GO:0008318 GO:GO:0018342 OMA:HRRFIVE
GeneTree:ENSGT00550000074935 PIR:T15061 RefSeq:NP_499882.1
HSSP:Q04631 ProteinModelPortal:O44501 SMR:O44501 IntAct:O44501
STRING:O44501 PaxDb:O44501 EnsemblMetazoa:R02D3.5.1
EnsemblMetazoa:R02D3.5.2 GeneID:176840 KEGG:cel:CELE_R02D3.5
UCSC:R02D3.5.1 CTD:176840 WormBase:R02D3.5 InParanoid:O44501
NextBio:894242 Uniprot:O44501
Length = 328
Score = 179 (68.1 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 49/196 (25%), Positives = 93/196 (47%)
Query: 36 KNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDC 95
KN++ D ++L + +R P ++W YR+ L EL + +E++ D
Sbjct: 55 KNEK-SDRVMALLEDCIRLNPANYTVWQYRRVCLT---------ELGWDLKKEMRYLSDI 104
Query: 96 LLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKV 155
+ PK+Y W R ++++ I + EL C+ + + +N+H W +R++V KV
Sbjct: 105 IQESPKNYQVWHHRRFIVETIGESA-VNDELHFCSEVIRDENKNYHAWQHRQWVVRTFKV 163
Query: 156 APLKELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQDKYVNEFSMVESAVF 215
KEL ++ + + N SA++YR L+ L Y + ++ E ++ + +
Sbjct: 164 PLEKELTFALHMLLLDNRNNSAYNYRYFLMTL-YDKTEDASQLDI-----EINLAKKFIE 217
Query: 216 TEPKDQSAWFYQRWLL 231
P ++SAW Y LL
Sbjct: 218 NIPNNESAWNYLAGLL 233
Score = 51 (23.0 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 8/18 (44%), Positives = 15/18 (83%)
Query: 331 KRFDLLKTLDPLRLNYYK 348
K + L+++DP+R+NYY+
Sbjct: 291 KLYKDLQSIDPVRVNYYR 308
>UNIPROTKB|O44501 [details] [associations]
symbol:fnta-1 "Protein FNTA-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 GO:GO:0009792
GO:GO:0002009 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0040035 EMBL:FO081663
eggNOG:COG5536 HOGENOM:HOG000188957 KO:K05955 GO:GO:0008318
GO:GO:0018342 OMA:HRRFIVE GeneTree:ENSGT00550000074935 PIR:T15061
RefSeq:NP_499882.1 HSSP:Q04631 ProteinModelPortal:O44501 SMR:O44501
IntAct:O44501 STRING:O44501 PaxDb:O44501 EnsemblMetazoa:R02D3.5.1
EnsemblMetazoa:R02D3.5.2 GeneID:176840 KEGG:cel:CELE_R02D3.5
UCSC:R02D3.5.1 CTD:176840 WormBase:R02D3.5 InParanoid:O44501
NextBio:894242 Uniprot:O44501
Length = 328
Score = 179 (68.1 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 49/196 (25%), Positives = 93/196 (47%)
Query: 36 KNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDC 95
KN++ D ++L + +R P ++W YR+ L EL + +E++ D
Sbjct: 55 KNEK-SDRVMALLEDCIRLNPANYTVWQYRRVCLT---------ELGWDLKKEMRYLSDI 104
Query: 96 LLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKV 155
+ PK+Y W R ++++ I + EL C+ + + +N+H W +R++V KV
Sbjct: 105 IQESPKNYQVWHHRRFIVETIGESA-VNDELHFCSEVIRDENKNYHAWQHRQWVVRTFKV 163
Query: 156 APLKELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQDKYVNEFSMVESAVF 215
KEL ++ + + N SA++YR L+ L Y + ++ E ++ + +
Sbjct: 164 PLEKELTFALHMLLLDNRNNSAYNYRYFLMTL-YDKTEDASQLDI-----EINLAKKFIE 217
Query: 216 TEPKDQSAWFYQRWLL 231
P ++SAW Y LL
Sbjct: 218 NIPNNESAWNYLAGLL 233
Score = 51 (23.0 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 8/18 (44%), Positives = 15/18 (83%)
Query: 331 KRFDLLKTLDPLRLNYYK 348
K + L+++DP+R+NYY+
Sbjct: 291 KLYKDLQSIDPVRVNYYR 308
>CGD|CAL0005317 [details] [associations]
symbol:RAM2 species:5476 "Candida albicans" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity"
evidence=IGI;IMP;IDA] [GO:0018344 "protein geranylgeranylation"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005965
"protein farnesyltransferase complex" evidence=IEA] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IEA]
[GO:0004661 "protein geranylgeranyltransferase activity"
evidence=IEA] [GO:0004660 "protein farnesyltransferase activity"
evidence=IEA] [GO:0007323 "peptide pheromone maturation"
evidence=IEA] [GO:0009405 "pathogenesis" evidence=IEA] [GO:0034411
"cell wall (1->3)-beta-D-glucan biosynthetic process" evidence=IEA]
[GO:0018343 "protein farnesylation" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 CGD:CAL0005317
EMBL:AACQ01000001 EMBL:AACQ01000002 KO:K05955 GO:GO:0004662
GO:GO:0018344 RefSeq:XP_723313.1 RefSeq:XP_723503.1
ProteinModelPortal:Q5APE8 STRING:Q5APE8 GeneID:3634767
GeneID:3634972 KEGG:cal:CaO19.12280 KEGG:cal:CaO19.4817
Uniprot:Q5APE8
Length = 306
Score = 170 (64.9 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 54/214 (25%), Positives = 93/214 (43%)
Query: 24 YHNLMETIFEKRKNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHE 83
Y +M + K +EY + AL +T + + ++W YR +L + L L++
Sbjct: 32 YKQIMGILLSLMKAEEYSERALHITELGINELASHYTIWIYRFNILKN----LPNRNLYD 87
Query: 84 LVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHISRAPNYE----KELELCNYYLELDERN 139
EL ++ L K+Y W R ++ I N + +E + L D +N
Sbjct: 88 ----ELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFPILEAMLSSDPKN 143
Query: 140 FHCWDYRRYVTDRHKVA-PLKELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHLPI 198
H W YR+++ D + KEL++ + I+ + N SAW +R LL HL
Sbjct: 144 HHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLL-----FSKKHLAT 198
Query: 199 EQDKYVNEFSMVESAVFTEPKDQSAWFYQRWLLG 232
+ + E + V+ + P++ S W Y LLG
Sbjct: 199 D-NTIDEELNYVKDKIVKCPQNPSTWNY---LLG 228
>UNIPROTKB|Q5APE8 [details] [associations]
symbol:RAM2 "Putative uncharacterized protein RAM2"
species:237561 "Candida albicans SC5314" [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IGI;IDA] [GO:0018344
"protein geranylgeranylation" evidence=IDA] InterPro:IPR002088
Pfam:PF01239 PROSITE:PS51147 CGD:CAL0005317 EMBL:AACQ01000001
EMBL:AACQ01000002 KO:K05955 GO:GO:0004662 GO:GO:0018344
RefSeq:XP_723313.1 RefSeq:XP_723503.1 ProteinModelPortal:Q5APE8
STRING:Q5APE8 GeneID:3634767 GeneID:3634972 KEGG:cal:CaO19.12280
KEGG:cal:CaO19.4817 Uniprot:Q5APE8
Length = 306
Score = 170 (64.9 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 54/214 (25%), Positives = 93/214 (43%)
Query: 24 YHNLMETIFEKRKNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHE 83
Y +M + K +EY + AL +T + + ++W YR +L + L L++
Sbjct: 32 YKQIMGILLSLMKAEEYSERALHITELGINELASHYTIWIYRFNILKN----LPNRNLYD 87
Query: 84 LVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHISRAPNYE----KELELCNYYLELDERN 139
EL ++ L K+Y W R ++ I N + +E + L D +N
Sbjct: 88 ----ELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFPILEAMLSSDPKN 143
Query: 140 FHCWDYRRYVTDRHKVA-PLKELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHLPI 198
H W YR+++ D + KEL++ + I+ + N SAW +R LL HL
Sbjct: 144 HHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLL-----FSKKHLAT 198
Query: 199 EQDKYVNEFSMVESAVFTEPKDQSAWFYQRWLLG 232
+ + E + V+ + P++ S W Y LLG
Sbjct: 199 D-NTIDEELNYVKDKIVKCPQNPSTWNY---LLG 228
>UNIPROTKB|F1P1Q8 [details] [associations]
symbol:PTAR1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008318 "protein prenyltransferase activity"
evidence=IEA] [GO:0018342 "protein prenylation" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 GO:GO:0008318
GO:GO:0018342 GeneTree:ENSGT00390000017892 EMBL:AADN02078226
EMBL:AADN02078227 IPI:IPI00819099 Ensembl:ENSGALT00000038217
ArrayExpress:F1P1Q8 Uniprot:F1P1Q8
Length = 208
Score = 152 (58.6 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 45/144 (31%), Positives = 72/144 (50%)
Query: 45 LSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCLLAQPKSYG 104
+ T +L PD + WN RKE++L TL+ L +L +L LTK PKS
Sbjct: 63 IDTTCTLLLLNPDFTTAWNVRKELIL--SGTLSP--LKDLHLGKLALTKF-----PKSPE 113
Query: 105 TWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYS 164
TW R Y+ +S +YE+E+++C+ N++ W +R +V L EL+ +
Sbjct: 114 TWIHRFYLFFFLSHR-DYEEEMDVCSEAAGRYPSNYNAWSHRIWVLQNVGKILLDELSST 172
Query: 165 TEKIEANFSNYSAWHYRSKLLPLL 188
+ + S++S +HYR LL L
Sbjct: 173 KYWVSMHVSDHSGFHYRQFLLKSL 196
>ZFIN|ZDB-GENE-030131-866 [details] [associations]
symbol:fnta "farnesyltransferase, CAAX box, alpha"
species:7955 "Danio rerio" [GO:0018342 "protein prenylation"
evidence=IEA] [GO:0008318 "protein prenyltransferase activity"
evidence=IEA] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
ZFIN:ZDB-GENE-030131-866 HOGENOM:HOG000188957 KO:K05955
GO:GO:0008318 CTD:2339 HOVERGEN:HBG004498 GO:GO:0018342
GeneTree:ENSGT00550000074935 EMBL:CABZ01069944 EMBL:CABZ01069945
EMBL:BC129222 IPI:IPI00769353 RefSeq:NP_001074029.1
UniGene:Dr.36981 SMR:A1L1V1 Ensembl:ENSDART00000054861
GeneID:555882 KEGG:dre:555882 InParanoid:A1L1V1 NextBio:20881212
Uniprot:A1L1V1
Length = 374
Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 48/160 (30%), Positives = 83/160 (51%)
Query: 36 KNQEYDDEALSLTSEVLRNIPDIN-SLWNYRKEVLLHMKATLAEEELHELVDRELKLTKD 94
KN E + A +LT+E + ++ N ++W+YR+ +L +K L EE++ + + +D
Sbjct: 86 KNDERSERAFALTAEAI-DLNAANYTVWHYRRVLLQALKKDL-REEMNYIT----AIIED 139
Query: 95 CLLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHK 154
QPK+Y W R V++ +S + EL+ L D +N+H W +R++V +K
Sbjct: 140 ----QPKNYQVWHHRRMVVEWLSDPAD---ELQFVAEILSQDAKNYHAWQHRQWVIQEYK 192
Query: 155 VAPLKELNYSTEKIEANFSNYSAWHYRSKLLPLL--YPDP 192
+ EL Y E +E + N SAW+ R ++ Y DP
Sbjct: 193 LWD-GELEYVEELLEEDVRNNSAWNQRHFVISHTSGYSDP 231
>UNIPROTKB|E9PQP6 [details] [associations]
symbol:FNTA "Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha"
species:9606 "Homo sapiens" [GO:0008318 "protein prenyltransferase
activity" evidence=IEA] [GO:0018342 "protein prenylation"
evidence=IEA] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
GO:GO:0008318 GO:GO:0018342 EMBL:AC110275 EMBL:AC113191
HGNC:HGNC:3782 IPI:IPI00976845 ProteinModelPortal:E9PQP6 SMR:E9PQP6
Ensembl:ENST00000533336 ArrayExpress:E9PQP6 Bgee:E9PQP6
Uniprot:E9PQP6
Length = 249
Score = 157 (60.3 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 52/200 (26%), Positives = 99/200 (49%)
Query: 36 KNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDC 95
+ E + A LT + + ++W++R+ VLL K+ +++LHE E+
Sbjct: 46 QRDERSERAFKLTRDAIELNAANYTVWHFRR-VLL--KSL--QKDLHE----EMNYITAI 96
Query: 96 LLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKV 155
+ QPK+Y W R +++ + R P+ +ELE L D +N+H W +R++V K+
Sbjct: 97 IEEQPKNYQVWHHRRVLVEWL-RDPS--QELEFIADILNQDAKNYHAWQHRQWVIQEFKL 153
Query: 156 APLKELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQD-KYVNEFSMVESAV 214
EL Y + ++ + N S W+ R ++ N+ +E++ +Y E M++
Sbjct: 154 WD-NELQYVDQLLKEDVRNNSVWNQRYFVISNT-TGYNDRAVLEREVQYTLE--MIKLV- 208
Query: 215 FTEPKDQSAWFYQRWLLGER 234
P ++SAW Y + +L +R
Sbjct: 209 ---PHNESAWNYLKGILQDR 225
Score = 115 (45.5 bits), Expect = 0.00049, P = 0.00049
Identities = 32/118 (27%), Positives = 55/118 (46%)
Query: 116 ISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEANFSNY 175
+ R E+ +L +EL+ N+ W +RR + + +E+NY T IE NY
Sbjct: 45 LQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNY 104
Query: 176 SAWHYRSKLLPLLYPDPNNHLPIEQDKYVNEFSMVESAVFTEPKDQSAWFYQRWLLGE 233
WH+R L+ L DP+ L D +N+ + K+ AW +++W++ E
Sbjct: 105 QVWHHRRVLVEWLR-DPSQELEFIAD-ILNQ----------DAKNYHAWQHRQWVIQE 150
>TAIR|locus:2081177 [details] [associations]
symbol:FTA "farnesyltransferase A" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008318 "protein prenyltransferase activity" evidence=IEA;IDA]
[GO:0018342 "protein prenylation" evidence=IEA;IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=TAS] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IPI]
[GO:0018343 "protein farnesylation" evidence=TAS] [GO:0018344
"protein geranylgeranylation" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0008360 "regulation
of cell shape" evidence=IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0048509
"regulation of meristem development" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005965 "protein
farnesyltransferase complex" evidence=IPI] [GO:0009414 "response to
water deprivation" evidence=IMP] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0008360 GO:GO:0009414 GO:GO:0009788 EMBL:AL356014
GO:GO:0048509 GO:GO:0018343 GO:GO:0004311 EMBL:AF064542
IPI:IPI00538297 PIR:T49006 PIR:T51811 RefSeq:NP_567084.1
UniGene:At.1520 ProteinModelPortal:Q9LX33 SMR:Q9LX33 IntAct:Q9LX33
STRING:Q9LX33 PaxDb:Q9LX33 PRIDE:Q9LX33 EnsemblPlants:AT3G59380.1
GeneID:825107 KEGG:ath:AT3G59380 TAIR:At3g59380 eggNOG:COG5536
HOGENOM:HOG000188957 InParanoid:Q9LX33 KO:K05955 OMA:FNNSAWN
BioCyc:MetaCyc:AT3G59380-MONOMER Genevestigator:Q9LX33
GermOnline:AT3G59380 GO:GO:0005953 GO:GO:0005965 GO:GO:0004662
GO:GO:0004660 GO:GO:0008318 GO:GO:0018344 Uniprot:Q9LX33
Length = 326
Score = 160 (61.4 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 58/198 (29%), Positives = 95/198 (47%)
Query: 37 NQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCL 96
+ E AL LT E L ++W++R+ VL + L EE E ++R + +D
Sbjct: 52 SDERSPRALRLTEETLLLNSGNYTVWHFRRLVLEALNHDLFEEL--EFIER---IAED-- 104
Query: 97 LAQPKSYGTWFQRCYVLDHISRAPNYE-KELELCNYYLELDERNFHCWDYRRYVTDRHKV 155
K+Y W R +V + + P+ +ELE L LD +++H W +R++ T R
Sbjct: 105 --NSKNYQLWHHRRWVAEKLG--PDVAGRELEFTRRVLSLDAKHYHAWSHRQW-TLRALG 159
Query: 156 APLKELNYSTEKIEANFSNYSAWHYRSKLL---PLLYPDPNNHLPIEQDKYVNEFSMVES 212
EL+Y E +EA+ N SAW+ R ++ PLL L ++ +E S
Sbjct: 160 GWEDELDYCHELLEADVFNNSAWNQRYYVITQSPLL-----GGLEAMRE---SEVSYTIK 211
Query: 213 AVFTEPKDQSAWFYQRWL 230
A+ T P ++S+W Y + L
Sbjct: 212 AILTNPANESSWRYLKAL 229
Score = 134 (52.2 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 46/148 (31%), Positives = 70/148 (47%)
Query: 50 EVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCLLAQPKSYGTWFQR 109
E + I + NS NY+ L H + +AE+ ++ REL+ T+ L K Y W R
Sbjct: 96 EFIERIAEDNSK-NYQ---LWHHRRWVAEKLGPDVAGRELEFTRRVLSLDAKHYHAWSHR 151
Query: 110 CYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYV-TDRHKVAPLK-----ELNY 163
+ L + +E EL+ C+ LE D N W+ R YV T + L+ E++Y
Sbjct: 152 QWTLRALG---GWEDELDYCHELLEADVFNNSAWNQRYYVITQSPLLGGLEAMRESEVSY 208
Query: 164 STEKIEANFSNYSAWHYRSKLLPLLYPD 191
+ + I N +N S+W Y L LY D
Sbjct: 209 TIKAILTNPANESSWRY----LKALYKD 232
Score = 129 (50.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 74/286 (25%), Positives = 125/286 (43%)
Query: 87 RELKLTKDCLLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYR 146
R L+LT++ LL +Y W R VL+ ++ + +ELE E + +N+ W +R
Sbjct: 58 RALRLTEETLLLNSGNYTVWHFRRLVLEALNH--DLFEELEFIERIAEDNSKNYQLWHHR 115
Query: 147 RYVTDR--HKVAPLKELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQDKYV 204
R+V ++ VA +EL ++ + + +Y AW +R L L E D Y
Sbjct: 116 RWVAEKLGPDVAG-RELEFTRRVLSLDAKHYHAWSHRQWTLRAL-----GGWEDELD-YC 168
Query: 205 NEFSMVESAVFTEPKDQSAW---FY---QRWLLGE----RTSPVQIISAGVLPSGVTFVT 254
+E ++E+ VF + SAW +Y Q LLG R S V +L + +
Sbjct: 169 HE--LLEADVF----NNSAWNQRYYVITQSPLLGGLEAMRESEVSYTIKAILTNPANESS 222
Query: 255 FNQLVDLTSTSQIKVDSNVLMSWTSLNGASRSFIWVRF----LLSLSCPYRNYISVALLT 310
+ L L + S+ +S LN SR+ + F LL L C +
Sbjct: 223 WRYLKALYKDDKESWISDPSVSSVCLNVLSRTDCFHGFALSTLLDLLCDGLRPTNEHK-D 281
Query: 311 SITLLQHLHPGSSDSNEIILKRFDLLKTLDPLRLNYYKDSESKYKI 356
S+ L + P ++ +N + +L +DP+R NY+ +SK +
Sbjct: 282 SVRALANEEPETNLANLVCT----ILGRVDPVRANYWAWRKSKITV 323
>UNIPROTKB|H0YKP6 [details] [associations]
symbol:RABGGTA "Geranylgeranyl transferase type-2 subunit
alpha" species:9606 "Homo sapiens" [GO:0008318 "protein
prenyltransferase activity" evidence=IEA] [GO:0018342 "protein
prenylation" evidence=IEA] InterPro:IPR002088 PROSITE:PS51147
EMBL:AL096870 GO:GO:0008318 GO:GO:0018342 HGNC:HGNC:9795
ProteinModelPortal:H0YKP6 SMR:H0YKP6 Ensembl:ENST00000560127
Bgee:H0YKP6 Uniprot:H0YKP6
Length = 73
Score = 140 (54.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 1 MHGRKKESVSVQ--EAKK--RSAKVKWYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIP 56
MHGR K S + EAK+ R K+K Y + + +F+KR+ E D+ L LTS++L P
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANP 60
Query: 57 DINSLWNYRKEV 68
D +LWN R+EV
Sbjct: 61 DFATLWNCRREV 72
>UNIPROTKB|P49354 [details] [associations]
symbol:FNTA "Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha"
species:9606 "Homo sapiens" [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0030548
"acetylcholine receptor regulator activity" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0045213 "neurotransmitter receptor metabolic process"
evidence=IEA] [GO:0004661 "protein geranylgeranyltransferase
activity" evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0018344 "protein geranylgeranylation" evidence=TAS] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0006921 "cellular component
disassembly involved in execution phase of apoptosis" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0018343 "protein
farnesylation" evidence=IDA] [GO:0004660 "protein
farnesyltransferase activity" evidence=IDA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0008017 "microtubule
binding" evidence=IDA] [GO:0090045 "positive regulation of
deacetylase activity" evidence=IDA] [GO:0090044 "positive
regulation of tubulin deacetylation" evidence=IDA]
Reactome:REACT_578 InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
GO:GO:0005829 GO:GO:0005875 GO:GO:0007179 GO:GO:0006921
GO:GO:0018343 GO:GO:0008017 GO:GO:0043014 GO:GO:0090045
eggNOG:COG5536 HOGENOM:HOG000188957 KO:K05955 GO:GO:0004662
GO:GO:0004660 GO:GO:0018344 CTD:2339 HOVERGEN:HBG004498
OrthoDB:EOG46DM39 OMA:HRRFIVE EMBL:L10413 EMBL:L00634 EMBL:AC110275
EMBL:BT009854 EMBL:AK292121 EMBL:AC113191 EMBL:BC017029
EMBL:BC084566 EMBL:AL698961 IPI:IPI00026813 IPI:IPI00607601
PIR:A47659 RefSeq:NP_002018.1 UniGene:Hs.370312 PDB:1JCQ PDB:1LD7
PDB:1LD8 PDB:1MZC PDB:1S63 PDB:1SA4 PDB:1TN6 PDB:2F0Y PDB:2H6F
PDB:2H6G PDB:2H6H PDB:2H6I PDB:2IEJ PDB:3E37 PDBsum:1JCQ
PDBsum:1LD7 PDBsum:1LD8 PDBsum:1MZC PDBsum:1S63 PDBsum:1SA4
PDBsum:1TN6 PDBsum:2F0Y PDBsum:2H6F PDBsum:2H6G PDBsum:2H6H
PDBsum:2H6I PDBsum:2IEJ PDBsum:3E37 ProteinModelPortal:P49354
SMR:P49354 IntAct:P49354 MINT:MINT-238861 STRING:P49354
PhosphoSite:P49354 DMDM:1346694 PaxDb:P49354 PRIDE:P49354
DNASU:2339 Ensembl:ENST00000302279 Ensembl:ENST00000342116
GeneID:2339 KEGG:hsa:2339 UCSC:uc003xps.3 GeneCards:GC08P042928
HGNC:HGNC:3782 HPA:CAB010149 HPA:HPA018830 MIM:134635
neXtProt:NX_P49354 PharmGKB:PA28199 InParanoid:P49354
PhylomeDB:P49354 BindingDB:P49354 ChEMBL:CHEMBL271
EvolutionaryTrace:P49354 GenomeRNAi:2339 NextBio:9495
PMAP-CutDB:P49354 ArrayExpress:P49354 Bgee:P49354 CleanEx:HS_FNTA
Genevestigator:P49354 GermOnline:ENSG00000168522 GO:GO:0004661
GO:GO:0090044 Uniprot:P49354
Length = 379
Score = 157 (60.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 52/200 (26%), Positives = 99/200 (49%)
Query: 36 KNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDC 95
+ E + A LT + + ++W++R+ VLL K+ +++LHE E+
Sbjct: 108 QRDERSERAFKLTRDAIELNAANYTVWHFRR-VLL--KSL--QKDLHE----EMNYITAI 158
Query: 96 LLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKV 155
+ QPK+Y W R +++ + R P+ +ELE L D +N+H W +R++V K+
Sbjct: 159 IEEQPKNYQVWHHRRVLVEWL-RDPS--QELEFIADILNQDAKNYHAWQHRQWVIQEFKL 215
Query: 156 APLKELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQD-KYVNEFSMVESAV 214
EL Y + ++ + N S W+ R ++ N+ +E++ +Y E M++
Sbjct: 216 WD-NELQYVDQLLKEDVRNNSVWNQRYFVISNT-TGYNDRAVLEREVQYTLE--MIKLV- 270
Query: 215 FTEPKDQSAWFYQRWLLGER 234
P ++SAW Y + +L +R
Sbjct: 271 ---PHNESAWNYLKGILQDR 287
>UNIPROTKB|F1N081 [details] [associations]
symbol:FNTA "Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha"
species:9913 "Bos taurus" [GO:0090045 "positive regulation of
deacetylase activity" evidence=IEA] [GO:0090044 "positive
regulation of tubulin deacetylation" evidence=IEA] [GO:0045213
"neurotransmitter receptor metabolic process" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0030548
"acetylcholine receptor regulator activity" evidence=IEA]
[GO:0018343 "protein farnesylation" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0004660
"protein farnesyltransferase activity" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 GO:GO:0030548
GO:GO:0045213 GO:GO:0071340 KO:K05955 RefSeq:NP_803464.2
UniGene:Bt.407 GeneID:281169 KEGG:bta:281169 CTD:2339
NextBio:20805229 GO:GO:0018342 OMA:HRRFIVE
GeneTree:ENSGT00550000074935 GO:GO:0004663 EMBL:DAAA02060964
IPI:IPI01017544 Ensembl:ENSBTAT00000004159 ArrayExpress:F1N081
Uniprot:F1N081
Length = 375
Score = 156 (60.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 52/200 (26%), Positives = 99/200 (49%)
Query: 36 KNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDC 95
+ E + A LT + + ++W++R+ VLL K+ +++LHE E+
Sbjct: 104 QRDERSERAFKLTRDAIELNAANYTVWHFRR-VLL--KSL--QKDLHE----EMNYISAI 154
Query: 96 LLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKV 155
+ QPK+Y W R +++ + R P+ +ELE L D +N+H W +R++V K+
Sbjct: 155 IEEQPKNYQVWHHRRVLVEWL-RDPS--QELEFIADILTQDAKNYHAWQHRQWVIQEFKL 211
Query: 156 APLKELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQD-KYVNEFSMVESAV 214
EL Y + ++ + N S W+ R ++ N+ +E++ +Y E M++
Sbjct: 212 WD-NELQYVDQLLKEDVRNNSVWNQRYFVISNT-TGYNDRAILEREVQYTLE--MIKLV- 266
Query: 215 FTEPKDQSAWFYQRWLLGER 234
P ++SAW Y + +L +R
Sbjct: 267 ---PHNESAWNYLKGILQDR 283
>UNIPROTKB|P29702 [details] [associations]
symbol:FNTA "Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha"
species:9913 "Bos taurus" [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IEA] [GO:0004660
"protein farnesyltransferase activity" evidence=IEA] [GO:0018342
"protein prenylation" evidence=IEA] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 EMBL:M74083 eggNOG:COG5536 HOGENOM:HOG000188957
KO:K05955 GO:GO:0004662 GO:GO:0004660 EMBL:BC112662 IPI:IPI00706713
PIR:A41013 RefSeq:NP_803464.2 UniGene:Bt.407
ProteinModelPortal:P29702 SMR:P29702 STRING:P29702 PRIDE:P29702
GeneID:281169 KEGG:bta:281169 CTD:2339 HOVERGEN:HBG004498
InParanoid:P29702 OrthoDB:EOG46DM39 BindingDB:P29702
ChEMBL:CHEMBL2377 NextBio:20805229 GO:GO:0018342 Uniprot:P29702
Length = 375
Score = 156 (60.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 52/200 (26%), Positives = 99/200 (49%)
Query: 36 KNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDC 95
+ E + A LT + + ++W++R+ VLL K+ +++LHE E+
Sbjct: 104 QRDERSERAFKLTRDAIELNAANYTVWHFRR-VLL--KSL--QKDLHE----EMNYISAI 154
Query: 96 LLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKV 155
+ QPK+Y W R +++ + R P+ +ELE L D +N+H W +R++V K+
Sbjct: 155 IEEQPKNYQVWHHRRVLVEWL-RDPS--QELEFIADILTQDAKNYHAWQHRQWVIQEFKL 211
Query: 156 APLKELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQD-KYVNEFSMVESAV 214
EL Y + ++ + N S W+ R ++ N+ +E++ +Y E M++
Sbjct: 212 WD-NELQYVDQLLKEDVRNNSVWNQRYFVISNT-TGYNDRAILEREVQYTLE--MIKLV- 266
Query: 215 FTEPKDQSAWFYQRWLLGER 234
P ++SAW Y + +L +R
Sbjct: 267 ---PHNESAWNYLKGILQDR 283
>FB|FBgn0031633 [details] [associations]
symbol:CG2976 species:7227 "Drosophila melanogaster"
[GO:0005965 "protein farnesyltransferase complex" evidence=ISS]
[GO:0004660 "protein farnesyltransferase activity" evidence=ISS]
[GO:0018342 "protein prenylation" evidence=IEA] InterPro:IPR002088
Pfam:PF01239 PROSITE:PS51147 EMBL:AE014134 eggNOG:COG5536 KO:K05955
GO:GO:0004660 GO:GO:0018342 OMA:HRRFIVE
GeneTree:ENSGT00550000074935 HSSP:Q04631 EMBL:AY118534
RefSeq:NP_608862.1 UniGene:Dm.11071 SMR:Q9VR31 STRING:Q9VR31
EnsemblMetazoa:FBtr0077415 GeneID:33682 KEGG:dme:Dmel_CG2976
UCSC:CG2976-RA FlyBase:FBgn0031633 InParanoid:Q9VR31
OrthoDB:EOG4RN8R8 GenomeRNAi:33682 NextBio:784761 Uniprot:Q9VR31
Length = 331
Score = 153 (58.9 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 37/121 (30%), Positives = 60/121 (49%)
Query: 111 YVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEA 170
Y+ I+R ++ L+L L L+ N+ W YRR V K EL+Y TE I
Sbjct: 53 YMRAIIARGEKSQRALDLTTDALRLNPANYTVWQYRRDVLRELKADLYAELDYLTEVIGQ 112
Query: 171 NFSNYSAWHYRSKLLPLLYPDPNNHLPIEQDKYVNEFSMVESAVFTEPKDQSAWFYQRWL 230
N NY WH+R ++ +L DP+N L + ++ VN+ + K+ AW +++W
Sbjct: 113 NSKNYQVWHHRRVIVEMLN-DPSNELELTENALVND---------GDAKNYHAWQHRQWA 162
Query: 231 L 231
+
Sbjct: 163 I 163
Score = 135 (52.6 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 41/145 (28%), Positives = 67/145 (46%)
Query: 39 EYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCLLA 98
E AL LT++ LR P ++W YR++VL +KA L E L + +
Sbjct: 62 EKSQRALDLTTDALRLNPANYTVWQYRRDVLRELKADLYAE---------LDYLTEVIGQ 112
Query: 99 QPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYL--ELDERNFHCWDYRRYVTDRHKVA 156
K+Y W R +++ ++ N ELEL L + D +N+H W +R++ +
Sbjct: 113 NSKNYQVWHHRRVIVEMLNDPSN---ELELTENALVNDGDAKNYHAWQHRQWAIRSFNLY 169
Query: 157 PLKELNYSTEKIEANFSNYSAWHYR 181
EL++ I + N SAW+ R
Sbjct: 170 D-DELSFVDRLISEDQRNNSAWNQR 193
>UNIPROTKB|E2RHY8 [details] [associations]
symbol:FNTA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090045 "positive regulation of deacetylase
activity" evidence=IEA] [GO:0090044 "positive regulation of tubulin
deacetylation" evidence=IEA] [GO:0045213 "neurotransmitter receptor
metabolic process" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030548 "acetylcholine receptor
regulator activity" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] [GO:0004660 "protein farnesyltransferase activity"
evidence=IEA] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
GO:GO:0030548 GO:GO:0045213 GO:GO:0071340 KO:K05955 CTD:2339
GO:GO:0018342 OMA:HRRFIVE GeneTree:ENSGT00550000074935
GO:GO:0004663 EMBL:AAEX03010368 RefSeq:XP_532786.2
ProteinModelPortal:E2RHY8 Ensembl:ENSCAFT00000008664 GeneID:475566
KEGG:cfa:475566 NextBio:20851380 Uniprot:E2RHY8
Length = 380
Score = 153 (58.9 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 51/200 (25%), Positives = 99/200 (49%)
Query: 36 KNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDC 95
+ E + A LT + + ++W++R+ VLL K+ +++LHE E+
Sbjct: 109 QRDERSERAFKLTRDAIELNAANYTVWHFRR-VLL--KSL--QKDLHE----EMNYITAI 159
Query: 96 LLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKV 155
+ QPK+Y W R +++ + + P+ +ELE L D +N+H W +R++V K+
Sbjct: 160 IEEQPKNYQVWHHRRVLVEWL-KDPS--QELEFIADILNQDAKNYHAWQHRQWVIQEFKL 216
Query: 156 APLKELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQD-KYVNEFSMVESAV 214
EL Y + ++ + N S W+ R ++ N+ +E++ +Y E M++
Sbjct: 217 WD-NELQYVDQLLKEDVRNNSVWNQRYFVISNT-TGYNDRAILEREVQYTLE--MIKLV- 271
Query: 215 FTEPKDQSAWFYQRWLLGER 234
P ++SAW Y + +L +R
Sbjct: 272 ---PHNESAWNYLKGILQDR 288
Score = 116 (45.9 bits), Expect = 0.00091, P = 0.00091
Identities = 32/118 (27%), Positives = 55/118 (46%)
Query: 116 ISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEANFSNY 175
+ R E+ +L +EL+ N+ W +RR + + +E+NY T IE NY
Sbjct: 108 LQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNY 167
Query: 176 SAWHYRSKLLPLLYPDPNNHLPIEQDKYVNEFSMVESAVFTEPKDQSAWFYQRWLLGE 233
WH+R L+ L DP+ L D +N+ + K+ AW +++W++ E
Sbjct: 168 QVWHHRRVLVEWL-KDPSQELEFIAD-ILNQ----------DAKNYHAWQHRQWVIQE 213
>UNIPROTKB|F1NJX8 [details] [associations]
symbol:FNTA "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0018342 "protein prenylation" evidence=IEA] [GO:0004660
"protein farnesyltransferase activity" evidence=IEA] [GO:0004663
"Rab geranylgeranyltransferase activity" evidence=IEA] [GO:0030548
"acetylcholine receptor regulator activity" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0045213 "neurotransmitter receptor metabolic process"
evidence=IEA] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
GO:GO:0030548 GO:GO:0018342 OMA:HRRFIVE
GeneTree:ENSGT00550000074935 GO:GO:0004663 EMBL:AADN02066039
EMBL:AADN02066040 IPI:IPI00580315 Ensembl:ENSGALT00000024838
Uniprot:F1NJX8
Length = 347
Score = 154 (59.3 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 58/220 (26%), Positives = 109/220 (49%)
Query: 18 SAKVKWYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLA 77
S K + ++ + +K E + A LT++ + ++W++R+ VLL +L
Sbjct: 59 SEKFRDVYDYFRAVLQK---DERSERAFKLTADAIELNAANYTVWHFRR-VLLQ---SLG 111
Query: 78 EEELHELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDE 137
++ L+E ELK + QPK+Y W R +++ + + P+ +ELE L D
Sbjct: 112 KD-LYE----ELKYITAIIEDQPKNYQVWHHRRVLVEWL-QDPS--QELEFIADILNQDA 163
Query: 138 RNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEANFSNYSAWHYRSKLL--PLLYPDPNNH 195
+N+H W +R++V K+ EL Y + + + N S W+ R ++ Y DP
Sbjct: 164 KNYHAWQHRQWVIQEFKLWD-DELEYVDQLLREDVRNNSVWNQRYFVIFNTTGYDDP--- 219
Query: 196 LPIEQD-KYVNEFSMVESAVFTEPKDQSAWFYQRWLLGER 234
++++ +Y E M+ +AV P ++SAW Y + +L +R
Sbjct: 220 AVLDREVQYTLE--MI-TAV---PHNESAWNYLKGILQDR 253
Score = 38 (18.4 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 426 LHVFPHL-PSLESLDVSHNAPNII 448
L +P+L L SL SH++P +I
Sbjct: 255 LSKYPNLLEQLLSLQPSHSSPYLI 278
>UNIPROTKB|H0YE66 [details] [associations]
symbol:H0YE66 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0008318 "protein prenyltransferase activity"
evidence=IEA] [GO:0018342 "protein prenylation" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 GO:GO:0008318
GO:GO:0018342 EMBL:AC110275 EMBL:AC113191 Ensembl:ENST00000534420
OMA:PEWNDIS Uniprot:H0YE66
Length = 207
Score = 141 (54.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 40/146 (27%), Positives = 73/146 (50%)
Query: 36 KNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDC 95
+ E + A LT + + ++W++R+ VLL K+ +++LHE E+
Sbjct: 65 QRDERSERAFKLTRDAIELNAANYTVWHFRR-VLL--KSL--QKDLHE----EMNYITAI 115
Query: 96 LLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKV 155
+ QPK+Y W R +++ + R P+ +ELE L D +N+H W +R++V K+
Sbjct: 116 IEEQPKNYQVWHHRRVLVEWL-RDPS--QELEFIADILNQDAKNYHAWQHRQWVIQEFKL 172
Query: 156 APLKELNYSTEKIEANFSNYSAWHYR 181
EL Y + ++ + N S W+ R
Sbjct: 173 WD-NELQYVDQLLKEDVRNNSVWNQR 197
Score = 115 (45.5 bits), Expect = 0.00027, P = 0.00027
Identities = 32/118 (27%), Positives = 55/118 (46%)
Query: 116 ISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEANFSNY 175
+ R E+ +L +EL+ N+ W +RR + + +E+NY T IE NY
Sbjct: 64 LQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNY 123
Query: 176 SAWHYRSKLLPLLYPDPNNHLPIEQDKYVNEFSMVESAVFTEPKDQSAWFYQRWLLGE 233
WH+R L+ L DP+ L D +N+ + K+ AW +++W++ E
Sbjct: 124 QVWHHRRVLVEWLR-DPSQELEFIAD-ILNQ----------DAKNYHAWQHRQWVIQE 169
>DICTYBASE|DDB_G0287077 [details] [associations]
symbol:DDB_G0287077 "protein prenyltransferase alpha
subunit" species:44689 "Dictyostelium discoideum" [GO:0018342
"protein prenylation" evidence=IEA] [GO:0008318 "protein
prenyltransferase activity" evidence=IEA] InterPro:IPR002088
Pfam:PF01239 PROSITE:PS51147 dictyBase:DDB_G0287077
EMBL:AAFI02000096 GO:GO:0008318 GO:GO:0018342 KO:K14137
eggNOG:NOG120449 RefSeq:XP_637415.1 ProteinModelPortal:Q54KV5
EnsemblProtists:DDB0187271 GeneID:8625947 KEGG:ddi:DDB_G0287077
InParanoid:Q54KV5 OMA:THRWWIL Uniprot:Q54KV5
Length = 406
Score = 145 (56.1 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 59/222 (26%), Positives = 103/222 (46%)
Query: 6 KESVSVQEAKKRSAKVKWYHNLMETIFEKRKNQEYDDEALSLTSEVL---RNIPDINS-- 60
K +S Q K + Y +++ FEK+ N + L +E+L RN+ IN+
Sbjct: 54 KLGISFQWMIKLYSYALTYFTELKSAFEKKMNDLPERHQQLLVNELLQATRNVLLINAEN 113
Query: 61 --LWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCLLAQPKSYGTWFQRCYVL-DHIS 117
N RKE L+++K ++E+ L L TK PKS W R +V+ D+
Sbjct: 114 LTALNLRKE-LINLKYIKHKDEISLL---NLIFTK-----HPKSGEGWAHRKWVITDYFK 164
Query: 118 RAPNY---EKELELCNYYLELDERNFHCWDYRRYVTDRHKV-APLKELNYSTEKIEANFS 173
+ +Y E EL +C E+ +N++ W +R ++ V LK+L + ++ N S
Sbjct: 165 KTGDYLDYEIELAVCKRVAEIYPKNYYSWTHRWWILQHLSVDIILKDLETMEDWVKRNIS 224
Query: 174 NYSAWHYRSKLLPLLYP------DPNNHLPIEQDKYVNEFSM 209
+Y +H+R +L L+ D NN+ + ++ NE +
Sbjct: 225 DYCGYHHRYLILTHLFNKCYNSNDDNNNNESKSEENSNEMKI 266
>RGD|2625 [details] [associations]
symbol:Fnta "farnesyltransferase, CAAX box, alpha" species:10116
"Rattus norvegicus" [GO:0004660 "protein farnesyltransferase
activity" evidence=IEA;ISO;IDA] [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IEA;IDA] [GO:0004663
"Rab geranylgeranyltransferase activity" evidence=IEA;ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005875 "microtubule associated complex"
evidence=IEA;ISO] [GO:0005953 "CAAX-protein geranylgeranyltransferase
complex" evidence=IDA] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0010035 "response to inorganic
substance" evidence=IMP] [GO:0010469 "regulation of receptor
activity" evidence=ISO] [GO:0014070 "response to organic cyclic
compound" evidence=IMP] [GO:0018342 "protein prenylation"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=IEA;ISO]
[GO:0030548 "acetylcholine receptor regulator activity"
evidence=IEA;ISO] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IEA;ISO] [GO:0034097 "response to cytokine stimulus"
evidence=IMP] [GO:0043014 "alpha-tubulin binding" evidence=IEA;ISO]
[GO:0043066 "negative regulation of apoptotic process" evidence=IMP]
[GO:0045213 "neurotransmitter receptor metabolic process"
evidence=IEA;ISO] [GO:0045787 "positive regulation of cell cycle"
evidence=IMP] [GO:0051770 "positive regulation of nitric-oxide
synthase biosynthetic process" evidence=IMP] [GO:0051771 "negative
regulation of nitric-oxide synthase biosynthetic process"
evidence=IMP] [GO:0090044 "positive regulation of tubulin
deacetylation" evidence=IEA;ISO] [GO:0090045 "positive regulation of
deacetylase activity" evidence=IEA;ISO] [GO:0008144 "drug binding"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0019840 "isoprenoid binding" evidence=IDA] [GO:0042277 "peptide
binding" evidence=IDA] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 RGD:2625 GO:GO:0005737 GO:GO:0043066 GO:GO:0008284
GO:GO:0034097 GO:GO:0014070 GO:GO:0010035 GO:GO:0030548 GO:GO:0045213
GO:GO:0045787 GO:GO:0051770 GO:GO:0071340 GO:GO:0051771
eggNOG:COG5536 HOGENOM:HOG000188957 KO:K05955 GO:GO:0005953
GO:GO:0004662 GO:GO:0004660 CTD:2339 HOVERGEN:HBG004498
OrthoDB:EOG46DM39 GO:GO:0018342 GO:GO:0004663 EMBL:M81225
IPI:IPI00188070 PIR:A41625 RefSeq:NP_036979.1 UniGene:Rn.5990
PDB:1D8D PDB:1D8E PDB:1FPP PDB:1FT1 PDB:1FT2 PDB:1FTI PDB:1HZ7
PDB:1JCR PDB:1JCS PDB:1KZO PDB:1KZP PDB:1KZR PDB:1N4P PDB:1N4Q
PDB:1N4R PDB:1N4S PDB:1N94 PDB:1N95 PDB:1N9A PDB:1NI1 PDB:1NL4
PDB:1O1R PDB:1O1S PDB:1O1T PDB:1O5M PDB:1QBQ PDB:1QE2 PDB:1S64
PDB:1SA5 PDB:1TN7 PDB:1TN8 PDB:1TNB PDB:1TNO PDB:1TNU PDB:1TNY
PDB:1TNZ PDB:1X81 PDB:2BED PDB:2FTI PDB:2R2L PDB:2ZIR PDB:2ZIS
PDB:3DPY PDB:3E30 PDB:3E32 PDB:3E33 PDB:3E34 PDB:3EU5 PDB:3EUV
PDB:3FTI PDB:3KSL PDB:3KSQ PDB:4GTM PDB:4GTO PDB:4GTP PDB:4GTQ
PDB:4GTR PDBsum:1D8D PDBsum:1D8E PDBsum:1FPP PDBsum:1FT1 PDBsum:1FT2
PDBsum:1FTI PDBsum:1HZ7 PDBsum:1JCR PDBsum:1JCS PDBsum:1KZO
PDBsum:1KZP PDBsum:1KZR PDBsum:1N4P PDBsum:1N4Q PDBsum:1N4R
PDBsum:1N4S PDBsum:1N94 PDBsum:1N95 PDBsum:1N9A PDBsum:1NI1
PDBsum:1NL4 PDBsum:1O1R PDBsum:1O1S PDBsum:1O1T PDBsum:1O5M
PDBsum:1QBQ PDBsum:1QE2 PDBsum:1S64 PDBsum:1SA5 PDBsum:1TN7
PDBsum:1TN8 PDBsum:1TNB PDBsum:1TNO PDBsum:1TNU PDBsum:1TNY
PDBsum:1TNZ PDBsum:1X81 PDBsum:2BED PDBsum:2FTI PDBsum:2R2L
PDBsum:2ZIR PDBsum:2ZIS PDBsum:3DPY PDBsum:3E30 PDBsum:3E32
PDBsum:3E33 PDBsum:3E34 PDBsum:3EU5 PDBsum:3EUV PDBsum:3FTI
PDBsum:3KSL PDBsum:3KSQ PDBsum:4GTM PDBsum:4GTO PDBsum:4GTP
PDBsum:4GTQ PDBsum:4GTR ProteinModelPortal:Q04631 SMR:Q04631
DIP:DIP-6131N IntAct:Q04631 MINT:MINT-121907 STRING:Q04631
PhosphoSite:Q04631 PRIDE:Q04631 GeneID:25318 KEGG:rno:25318
UCSC:RGD:2625 InParanoid:Q04631 SABIO-RK:Q04631 BindingDB:Q04631
ChEMBL:CHEMBL4432 EvolutionaryTrace:Q04631 NextBio:606153
ArrayExpress:Q04631 Genevestigator:Q04631
GermOnline:ENSRNOG00000014462 Uniprot:Q04631
Length = 377
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 45/200 (22%), Positives = 100/200 (50%)
Query: 36 KNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDC 95
+ E + A LT + + ++W++R+ +L ++ L +EE++ ++ + ++
Sbjct: 108 QRDERSERAFKLTRDAIELNAANYTVWHFRRVLLRSLQKDL-QEEMNYII----AIIEE- 161
Query: 96 LLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKV 155
QPK+Y W R +++ + + P+ +ELE L D +N+H W +R++V ++
Sbjct: 162 ---QPKNYQVWHHRRVLVEWL-KDPS--QELEFIADILNQDAKNYHAWQHRQWVIQEFRL 215
Query: 156 APLKELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQD-KYVNEFSMVESAV 214
EL Y + ++ + N S W+ R ++ ++ +E++ +Y E M++
Sbjct: 216 WD-NELQYVDQLLKEDVRNNSVWNQRHFVISNT-TGYSDRAVLEREVQYTLE--MIKLV- 270
Query: 215 FTEPKDQSAWFYQRWLLGER 234
P ++SAW Y + +L +R
Sbjct: 271 ---PHNESAWNYLKGILQDR 287
Score = 117 (46.2 bits), Expect = 0.00070, P = 0.00070
Identities = 57/271 (21%), Positives = 110/271 (40%)
Query: 83 ELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHC 142
E +R KLT+D + +Y W R +L + + + ++E+ +E +N+
Sbjct: 111 ERSERAFKLTRDAIELNAANYTVWHFRRVLLRSLQK--DLQEEMNYIIAIIEEQPKNYQV 168
Query: 143 WDYRRYVTDRHKVAPLKELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQDK 202
W +RR + + K P +EL + + + + NY AW +R ++ E
Sbjct: 169 WHHRRVLVEWLK-DPSQELEFIADILNQDAKNYHAWQHRQWVIQ------------EFRL 215
Query: 203 YVNEFSMVESAVFTEPKDQSAWFYQRWLLGERTSPVQIISAGVLPSGVTFVTFNQLVDLT 262
+ NE V+ + + ++ S W + +++ T VL V + +++ L
Sbjct: 216 WDNELQYVDQLLKEDVRNNSVWNQRHFVISNTTG---YSDRAVLEREVQYTL--EMIKLV 270
Query: 263 STSQIKVDSNVLMSWTSLNGASRSFIWVRFLLSLSCPYRNYISVALLTSITLLQHLHPGS 322
++ N L G SR + LL L + + +A L I + +
Sbjct: 271 PHNESAW--NYLKGILQDRGLSRYPNLLNQLLDLQPSHSSPYLIAFLVDI--YEDMLENQ 326
Query: 323 SDSNEIIL-KRFDLLKTL----DPLRLNYYK 348
D+ E IL K +L + L D +R Y++
Sbjct: 327 CDNKEDILNKALELCEILAKEKDTIRKEYWR 357
>UNIPROTKB|Q04631 [details] [associations]
symbol:Fnta "Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
RGD:2625 GO:GO:0005737 GO:GO:0043066 GO:GO:0008284 GO:GO:0034097
GO:GO:0014070 GO:GO:0010035 GO:GO:0030548 GO:GO:0045213
GO:GO:0045787 GO:GO:0051770 GO:GO:0071340 GO:GO:0051771
eggNOG:COG5536 HOGENOM:HOG000188957 KO:K05955 GO:GO:0005953
GO:GO:0004662 GO:GO:0004660 CTD:2339 HOVERGEN:HBG004498
OrthoDB:EOG46DM39 GO:GO:0018342 GO:GO:0004663 EMBL:M81225
IPI:IPI00188070 PIR:A41625 RefSeq:NP_036979.1 UniGene:Rn.5990
PDB:1D8D PDB:1D8E PDB:1FPP PDB:1FT1 PDB:1FT2 PDB:1FTI PDB:1HZ7
PDB:1JCR PDB:1JCS PDB:1KZO PDB:1KZP PDB:1KZR PDB:1N4P PDB:1N4Q
PDB:1N4R PDB:1N4S PDB:1N94 PDB:1N95 PDB:1N9A PDB:1NI1 PDB:1NL4
PDB:1O1R PDB:1O1S PDB:1O1T PDB:1O5M PDB:1QBQ PDB:1QE2 PDB:1S64
PDB:1SA5 PDB:1TN7 PDB:1TN8 PDB:1TNB PDB:1TNO PDB:1TNU PDB:1TNY
PDB:1TNZ PDB:1X81 PDB:2BED PDB:2FTI PDB:2R2L PDB:2ZIR PDB:2ZIS
PDB:3DPY PDB:3E30 PDB:3E32 PDB:3E33 PDB:3E34 PDB:3EU5 PDB:3EUV
PDB:3FTI PDB:3KSL PDB:3KSQ PDB:4GTM PDB:4GTO PDB:4GTP PDB:4GTQ
PDB:4GTR PDBsum:1D8D PDBsum:1D8E PDBsum:1FPP PDBsum:1FT1
PDBsum:1FT2 PDBsum:1FTI PDBsum:1HZ7 PDBsum:1JCR PDBsum:1JCS
PDBsum:1KZO PDBsum:1KZP PDBsum:1KZR PDBsum:1N4P PDBsum:1N4Q
PDBsum:1N4R PDBsum:1N4S PDBsum:1N94 PDBsum:1N95 PDBsum:1N9A
PDBsum:1NI1 PDBsum:1NL4 PDBsum:1O1R PDBsum:1O1S PDBsum:1O1T
PDBsum:1O5M PDBsum:1QBQ PDBsum:1QE2 PDBsum:1S64 PDBsum:1SA5
PDBsum:1TN7 PDBsum:1TN8 PDBsum:1TNB PDBsum:1TNO PDBsum:1TNU
PDBsum:1TNY PDBsum:1TNZ PDBsum:1X81 PDBsum:2BED PDBsum:2FTI
PDBsum:2R2L PDBsum:2ZIR PDBsum:2ZIS PDBsum:3DPY PDBsum:3E30
PDBsum:3E32 PDBsum:3E33 PDBsum:3E34 PDBsum:3EU5 PDBsum:3EUV
PDBsum:3FTI PDBsum:3KSL PDBsum:3KSQ PDBsum:4GTM PDBsum:4GTO
PDBsum:4GTP PDBsum:4GTQ PDBsum:4GTR ProteinModelPortal:Q04631
SMR:Q04631 DIP:DIP-6131N IntAct:Q04631 MINT:MINT-121907
STRING:Q04631 PhosphoSite:Q04631 PRIDE:Q04631 GeneID:25318
KEGG:rno:25318 UCSC:RGD:2625 InParanoid:Q04631 SABIO-RK:Q04631
BindingDB:Q04631 ChEMBL:CHEMBL4432 EvolutionaryTrace:Q04631
NextBio:606153 ArrayExpress:Q04631 Genevestigator:Q04631
GermOnline:ENSRNOG00000014462 Uniprot:Q04631
Length = 377
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 45/200 (22%), Positives = 100/200 (50%)
Query: 36 KNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDC 95
+ E + A LT + + ++W++R+ +L ++ L +EE++ ++ + ++
Sbjct: 108 QRDERSERAFKLTRDAIELNAANYTVWHFRRVLLRSLQKDL-QEEMNYII----AIIEE- 161
Query: 96 LLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKV 155
QPK+Y W R +++ + + P+ +ELE L D +N+H W +R++V ++
Sbjct: 162 ---QPKNYQVWHHRRVLVEWL-KDPS--QELEFIADILNQDAKNYHAWQHRQWVIQEFRL 215
Query: 156 APLKELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQD-KYVNEFSMVESAV 214
EL Y + ++ + N S W+ R ++ ++ +E++ +Y E M++
Sbjct: 216 WD-NELQYVDQLLKEDVRNNSVWNQRHFVISNT-TGYSDRAVLEREVQYTLE--MIKLV- 270
Query: 215 FTEPKDQSAWFYQRWLLGER 234
P ++SAW Y + +L +R
Sbjct: 271 ---PHNESAWNYLKGILQDR 287
Score = 117 (46.2 bits), Expect = 0.00070, P = 0.00070
Identities = 57/271 (21%), Positives = 110/271 (40%)
Query: 83 ELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHC 142
E +R KLT+D + +Y W R +L + + + ++E+ +E +N+
Sbjct: 111 ERSERAFKLTRDAIELNAANYTVWHFRRVLLRSLQK--DLQEEMNYIIAIIEEQPKNYQV 168
Query: 143 WDYRRYVTDRHKVAPLKELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQDK 202
W +RR + + K P +EL + + + + NY AW +R ++ E
Sbjct: 169 WHHRRVLVEWLK-DPSQELEFIADILNQDAKNYHAWQHRQWVIQ------------EFRL 215
Query: 203 YVNEFSMVESAVFTEPKDQSAWFYQRWLLGERTSPVQIISAGVLPSGVTFVTFNQLVDLT 262
+ NE V+ + + ++ S W + +++ T VL V + +++ L
Sbjct: 216 WDNELQYVDQLLKEDVRNNSVWNQRHFVISNTTG---YSDRAVLEREVQYTL--EMIKLV 270
Query: 263 STSQIKVDSNVLMSWTSLNGASRSFIWVRFLLSLSCPYRNYISVALLTSITLLQHLHPGS 322
++ N L G SR + LL L + + +A L I + +
Sbjct: 271 PHNESAW--NYLKGILQDRGLSRYPNLLNQLLDLQPSHSSPYLIAFLVDI--YEDMLENQ 326
Query: 323 SDSNEIIL-KRFDLLKTL----DPLRLNYYK 348
D+ E IL K +L + L D +R Y++
Sbjct: 327 CDNKEDILNKALELCEILAKEKDTIRKEYWR 357
>MGI|MGI:104683 [details] [associations]
symbol:Fnta "farnesyltransferase, CAAX box, alpha"
species:10090 "Mus musculus" [GO:0004659 "prenyltransferase
activity" evidence=IEA] [GO:0004660 "protein farnesyltransferase
activity" evidence=ISO;IDA] [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=ISO] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005875 "microtubule associated
complex" evidence=ISO] [GO:0005953 "CAAX-protein
geranylgeranyltransferase complex" evidence=ISO] [GO:0008017
"microtubule binding" evidence=ISO] [GO:0008144 "drug binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0008318 "protein prenyltransferase activity"
evidence=IEA] [GO:0010035 "response to inorganic substance"
evidence=ISO] [GO:0010469 "regulation of receptor activity"
evidence=IMP] [GO:0014070 "response to organic cyclic compound"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018342 "protein prenylation" evidence=IEA] [GO:0018343
"protein farnesylation" evidence=ISO] [GO:0019840 "isoprenoid
binding" evidence=ISO] [GO:0030548 "acetylcholine receptor
regulator activity" evidence=IMP] [GO:0030971 "receptor tyrosine
kinase binding" evidence=IPI] [GO:0034097 "response to cytokine
stimulus" evidence=ISO] [GO:0042277 "peptide binding" evidence=ISO]
[GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO]
[GO:0045213 "neurotransmitter receptor metabolic process"
evidence=IMP] [GO:0045787 "positive regulation of cell cycle"
evidence=ISO] [GO:0051770 "positive regulation of nitric-oxide
synthase biosynthetic process" evidence=ISO] [GO:0051771 "negative
regulation of nitric-oxide synthase biosynthetic process"
evidence=ISO] [GO:0090044 "positive regulation of tubulin
deacetylation" evidence=ISO] [GO:0090045 "positive regulation of
deacetylase activity" evidence=ISO] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 MGI:MGI:104683 GO:GO:0005737 GO:GO:0043066
GO:GO:0008144 GO:GO:0008284 GO:GO:0008270 GO:GO:0034097
GO:GO:0014070 GO:GO:0042277 GO:GO:0010035 GO:GO:0030548
GO:GO:0045213 GO:GO:0045787 eggNOG:COG5536 HOGENOM:HOG000188957
KO:K05955 GO:GO:0005953 GO:GO:0004662 GO:GO:0004660 CTD:2339
HOVERGEN:HBG004498 OrthoDB:EOG46DM39 GO:GO:0018342 OMA:HRRFIVE
EMBL:D49744 EMBL:BC012711 IPI:IPI00118904 PIR:JC4368
RefSeq:NP_032059.1 UniGene:Mm.3496 PDB:3PZ4 PDBsum:3PZ4
ProteinModelPortal:Q61239 SMR:Q61239 STRING:Q61239
PhosphoSite:Q61239 PaxDb:Q61239 PRIDE:Q61239
Ensembl:ENSMUST00000016138 GeneID:14272 KEGG:mmu:14272
GeneTree:ENSGT00550000074935 InParanoid:Q61239 BindingDB:Q61239
ChEMBL:CHEMBL2153 NextBio:285645 Bgee:Q61239 CleanEx:MM_FNTA
Genevestigator:Q61239 GermOnline:ENSMUSG00000015994 GO:GO:0019840
GO:GO:0004663 Uniprot:Q61239
Length = 377
Score = 139 (54.0 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 45/200 (22%), Positives = 99/200 (49%)
Query: 36 KNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDC 95
+ E + A LT + + ++W++R+ +L ++ L +EE++ + + ++
Sbjct: 108 QRDERSERAFKLTRDAIELNAANYTVWHFRRVLLRSLQKDL-QEEMNYIT----AIIEE- 161
Query: 96 LLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKV 155
QPK+Y W R +++ + + P+ +ELE L D +N+H W +R++V ++
Sbjct: 162 ---QPKNYQVWHHRRVLVEWL-KDPS--QELEFIADILSQDAKNYHAWQHRQWVIQEFRL 215
Query: 156 APLKELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQD-KYVNEFSMVESAV 214
EL Y + ++ + N S W+ R ++ ++ +E++ +Y E M++
Sbjct: 216 WD-NELQYVDQLLKEDVRNNSVWNQRHFVISNT-TGYSDRAVLEREVQYTLE--MIKLV- 270
Query: 215 FTEPKDQSAWFYQRWLLGER 234
P ++SAW Y + +L +R
Sbjct: 271 ---PHNESAWNYLKGILQDR 287
Score = 119 (46.9 bits), Expect = 0.00042, P = 0.00042
Identities = 56/271 (20%), Positives = 110/271 (40%)
Query: 83 ELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHC 142
E +R KLT+D + +Y W R +L + + + ++E+ +E +N+
Sbjct: 111 ERSERAFKLTRDAIELNAANYTVWHFRRVLLRSLQK--DLQEEMNYITAIIEEQPKNYQV 168
Query: 143 WDYRRYVTDRHKVAPLKELNYSTEKIEANFSNYSAWHYRSKLLPLLYPDPNNHLPIEQDK 202
W +RR + + K P +EL + + + + NY AW +R ++ E
Sbjct: 169 WHHRRVLVEWLK-DPSQELEFIADILSQDAKNYHAWQHRQWVIQ------------EFRL 215
Query: 203 YVNEFSMVESAVFTEPKDQSAWFYQRWLLGERTSPVQIISAGVLPSGVTFVTFNQLVDLT 262
+ NE V+ + + ++ S W + +++ T VL V + +++ L
Sbjct: 216 WDNELQYVDQLLKEDVRNNSVWNQRHFVISNTTG---YSDRAVLEREVQYTL--EMIKLV 270
Query: 263 STSQIKVDSNVLMSWTSLNGASRSFIWVRFLLSLSCPYRNYISVALLTSITLLQHLHPGS 322
++ N L G SR + LL L + + +A L + + +
Sbjct: 271 PHNESAW--NYLKGILQDRGLSRYPNLLNQLLDLQPSHSSPYLIAFLVDV--YEDMLENQ 326
Query: 323 SDSNEIIL-KRFDLLKTL----DPLRLNYYK 348
D+ E IL K +L + L D +R Y++
Sbjct: 327 CDNKEDILNKALELCEILAKEKDTIRKEYWR 357
Score = 117 (46.2 bits), Expect = 0.00070, P = 0.00070
Identities = 32/118 (27%), Positives = 55/118 (46%)
Query: 116 ISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEANFSNY 175
+ R E+ +L +EL+ N+ W +RR + + +E+NY T IE NY
Sbjct: 107 LQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYITAIIEEQPKNY 166
Query: 176 SAWHYRSKLLPLLYPDPNNHLPIEQDKYVNEFSMVESAVFTEPKDQSAWFYQRWLLGE 233
WH+R L+ L DP+ L EF + + + K+ AW +++W++ E
Sbjct: 167 QVWHHRRVLVEWL-KDPSQEL---------EF--IADILSQDAKNYHAWQHRQWVIQE 212
>FB|FBgn0027296 [details] [associations]
symbol:l(1)G0144 "lethal (1) G0144" species:7227 "Drosophila
melanogaster" [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=ISS] [GO:0005968 "Rab-protein geranylgeranyltransferase
complex" evidence=ISS] [GO:0018342 "protein prenylation"
evidence=IEA] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
EMBL:AE014298 GO:GO:0018342 GO:GO:0004663
GeneTree:ENSGT00390000017892 KO:K14137 eggNOG:NOG120449
EMBL:AY069689 RefSeq:NP_569992.1 UniGene:Dm.2001 SMR:Q9W501
MINT:MINT-882683 EnsemblMetazoa:FBtr0070414 GeneID:31212
KEGG:dme:Dmel_CG3073 UCSC:CG3073-RA FlyBase:FBgn0027296
InParanoid:Q9W501 OMA:AYRRWLY OrthoDB:EOG402V85 GenomeRNAi:31212
NextBio:772477 Uniprot:Q9W501
Length = 398
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 41/157 (26%), Positives = 76/157 (48%)
Query: 35 RKNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKD 94
++ Q+ D A L +L N PD+ + W+ R++++ K L+ +++EL+ +
Sbjct: 87 QQQQQSDSLAKYLNVALLIN-PDVTTFWHIRRQLV--QKNRLS-------INKELQFSAL 136
Query: 95 CLLAQPKSYGTWFQRCYVLDHISR-APNYEKELELCNYYLELDERNFHCWDYRRYVTDRH 153
L +PKS + R ++ S A ++ E+ +C + N+H W +R+++
Sbjct: 137 VLSIKPKSNEAFAYRRWLYSFQSADAIDWPNEIGICERAADRCASNYHAWSHRQWILQNG 196
Query: 154 KVAPLKELNYSTEK-IEANFSNYSAWHYRSKLLPLLY 189
EL TEK + + S+YS +HYR LL Y
Sbjct: 197 PCLLQSEL-LRTEKFMRKHISDYSCYHYRQVLLSRAY 232
>RGD|708369 [details] [associations]
symbol:Ptar1 "protein prenyltransferase alpha subunit repeat
containing 1" species:10116 "Rattus norvegicus" [GO:0008318
"protein prenyltransferase activity" evidence=IEA] [GO:0018342
"protein prenylation" evidence=IEA] InterPro:IPR002088 Pfam:PF01239
PROSITE:PS51147 RGD:708369 EMBL:CH473953 GO:GO:0008318
GO:GO:0018342 CTD:375743 GeneTree:ENSGT00390000017892 KO:K14137
OrthoDB:EOG46WZ8F IPI:IPI00778970 RefSeq:NP_001099230.2
UniGene:Rn.107234 Ensembl:ENSRNOT00000054775 GeneID:286972
KEGG:rno:286972 NextBio:625193 Uniprot:D3ZWG9
Length = 425
Score = 129 (50.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 51/191 (26%), Positives = 84/191 (43%)
Query: 23 WYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELH 82
+ HN + ++ RK + DE + +T +L PD + WN RKE++L TL+
Sbjct: 67 YVHNKL-LLYRTRKQWLHKDELIDVTCTLLLLNPDFTTAWNVRKELIL--SGTLSPV--- 120
Query: 83 ELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHISRA---PN------------------ 121
++L L K L PKS TW R +VL +S+ P+
Sbjct: 121 ----KDLHLGKLALTKFPKSPETWIHRRWVLQQLSQETSLPSSVAKGSLGVVPAERTQRI 176
Query: 122 YEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLK----ELNYSTEKIEANFSNYSA 177
++E+E+C+ N++ W +R +V LK EL+ + + S++S
Sbjct: 177 IQEEMEVCSEAAGRYPSNYNAWSHRIWVLQNVAKLDLKILLDELSSTKHWASVHVSDHSG 236
Query: 178 WHYRSKLLPLL 188
+HYR LL L
Sbjct: 237 FHYRQFLLKSL 247
>MGI|MGI:2444651 [details] [associations]
symbol:Lingo4 "leucine rich repeat and Ig domain containing
4" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2444651 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
HOVERGEN:HBG057546 CTD:339398 eggNOG:NOG306417 OrthoDB:EOG49KFQ7
EMBL:BC117866 EMBL:BC117867 EMBL:AK042286 IPI:IPI00273210
RefSeq:NP_796224.1 UniGene:Mm.213001 ProteinModelPortal:Q149C3
SMR:Q149C3 PhosphoSite:Q149C3 PRIDE:Q149C3
Ensembl:ENSMUST00000050975 GeneID:320747 KEGG:mmu:320747
UCSC:uc008qgb.1 InParanoid:Q149C3 NextBio:397357 Bgee:Q149C3
CleanEx:MM_LINGO4 Genevestigator:Q149C3 Uniprot:Q149C3
Length = 593
Score = 131 (51.2 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 37/108 (34%), Positives = 57/108 (52%)
Query: 415 SLKLTHCSLSSL--HVFPHLPSLESLDVSHN------APNIILCVYFQSLKLTHCSLSSL 466
SL +T C+LSS+ HL L LD+S N A + V Q L+L+ L+S+
Sbjct: 256 SLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQELRLSGACLTSI 315
Query: 467 --HVFPHLPSLESLDVSHNAIDHIEDSVFAKYEACVQVILTGNPVSAD 512
H F L + LDV+ NA+ +E++ F + V + L+GNP++ D
Sbjct: 316 AAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPLTCD 363
>UNIPROTKB|Q6UY18 [details] [associations]
symbol:LINGO4 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 4" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:AL589765
HSSP:Q9BZR6 HOGENOM:HOG000246971 HOVERGEN:HBG057546 EMBL:AY358115
IPI:IPI00258050 RefSeq:NP_001004432.1 UniGene:Hs.591477
ProteinModelPortal:Q6UY18 SMR:Q6UY18 STRING:Q6UY18
PhosphoSite:Q6UY18 DMDM:74762377 PRIDE:Q6UY18
Ensembl:ENST00000368820 GeneID:339398 KEGG:hsa:339398
UCSC:uc001ezf.1 CTD:339398 GeneCards:GC01M151775 HGNC:HGNC:31814
MIM:609794 neXtProt:NX_Q6UY18 PharmGKB:PA162394098 eggNOG:NOG306417
InParanoid:Q6UY18 OMA:EPPNGTL OrthoDB:EOG49KFQ7 GenomeRNAi:339398
NextBio:97381 Bgee:Q6UY18 CleanEx:HS_LINGO4 Genevestigator:Q6UY18
Uniprot:Q6UY18
Length = 593
Score = 130 (50.8 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 37/108 (34%), Positives = 57/108 (52%)
Query: 415 SLKLTHCSLSSL--HVFPHLPSLESLDVSHN------APNIILCVYFQSLKLTHCSLSSL 466
SL +T C+LSS+ HL L LD+S N A + V Q L+L+ L+S+
Sbjct: 256 SLAITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLVRLQELRLSGACLTSI 315
Query: 467 --HVFPHLPSLESLDVSHNAIDHIEDSVFAKYEACVQVILTGNPVSAD 512
H F L + LDV+ NA+ +E++ F + V + L+GNP++ D
Sbjct: 316 AAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPLTCD 363
>UNIPROTKB|Q8SPE9 [details] [associations]
symbol:TLR4 "Toll-like receptor 4" species:9600 "Pongo
pygmaeus" [GO:0001875 "lipopolysaccharide receptor activity"
evidence=ISS] [GO:0032497 "detection of lipopolysaccharide"
evidence=ISS] [GO:0042116 "macrophage activation" evidence=ISS]
[GO:0046696 "lipopolysaccharide receptor complex" evidence=ISS]
InterPro:IPR000157 InterPro:IPR001611 InterPro:IPR017241
InterPro:IPR027168 Pfam:PF01582 PIRSF:PIRSF037595 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 GO:GO:0006954 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045087
GO:GO:0005622 GO:GO:0042116 InterPro:IPR025875 Pfam:PF12799
GO:GO:0004888 GO:GO:0046696 SUPFAM:SSF52200 GO:GO:0001875
GO:GO:0032497 HOVERGEN:HBG018823 PANTHER:PTHR24365:SF9
eggNOG:NOG249751 HOGENOM:HOG000037951 EMBL:AF497562 EMBL:AF497560
EMBL:AF497561 ProteinModelPortal:Q8SPE9 SMR:Q8SPE9 STRING:Q8SPE9
InParanoid:Q8SPE9 Uniprot:Q8SPE9
Length = 828
Score = 130 (50.8 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 50/168 (29%), Positives = 79/168 (47%)
Query: 368 QITNLSSLQLTSIHH--MHCFAHCKQVDLSNNPLTNNCLRHLTPLVACESLKLTHCSLSS 425
Q+ +LS ++ +I +H + L+ NP+ N L + L + + L +L+S
Sbjct: 79 QVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQNLALGAFSGLSSLQKLVAVETNLAS 138
Query: 426 LHVFP--HLPSLESLDVSHNA-PNIILCVYFQSL-KLTHCSLSS----------LHVFPH 471
L FP HL +L+ L+V+HN + L YF +L L H LSS L V
Sbjct: 139 LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCKDLQVLHQ 198
Query: 472 LPSLE-SLDVSHNAIDHIEDSVFAKYEACVQVILTGNPVSADMVVKHC 518
+P L SLD+S NA++ I+ F E + + N + V+K C
Sbjct: 199 MPLLNLSLDLSLNAMNFIQPGAFK--EIRLHKLTLRNSFDSLNVMKTC 244
>UNIPROTKB|H0YCW1 [details] [associations]
symbol:FNTA "Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha"
species:9606 "Homo sapiens" [GO:0008318 "protein prenyltransferase
activity" evidence=IEA] [GO:0018342 "protein prenylation"
evidence=IEA] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
GO:GO:0008318 GO:GO:0018342 EMBL:AC110275 EMBL:AC113191
HGNC:HGNC:3782 Ensembl:ENST00000531266 Bgee:H0YCW1 Uniprot:H0YCW1
Length = 197
Score = 116 (45.9 bits), Expect = 0.00016, P = 0.00016
Identities = 33/120 (27%), Positives = 61/120 (50%)
Query: 36 KNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDC 95
+ E + A LT + + ++W++R+ VLL K+ +++LHE E+
Sbjct: 90 QRDERSERAFKLTRDAIELNAANYTVWHFRR-VLL--KSL--QKDLHE----EMNYITAI 140
Query: 96 LLAQPKSYGTWFQRCYVLDHISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKV 155
+ QPK+Y W R +++ + R P+ +ELE L D +N+H W +R++V K+
Sbjct: 141 IEEQPKNYQVWHHRRVLVEWL-RDPS--QELEFIADILNQDAKNYHAWQHRQWVIQEFKL 197
Score = 115 (45.5 bits), Expect = 0.00022, P = 0.00022
Identities = 32/118 (27%), Positives = 55/118 (46%)
Query: 116 ISRAPNYEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLKELNYSTEKIEANFSNY 175
+ R E+ +L +EL+ N+ W +RR + + +E+NY T IE NY
Sbjct: 89 LQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNY 148
Query: 176 SAWHYRSKLLPLLYPDPNNHLPIEQDKYVNEFSMVESAVFTEPKDQSAWFYQRWLLGE 233
WH+R L+ L DP+ L D +N+ + K+ AW +++W++ E
Sbjct: 149 QVWHHRRVLVEWLR-DPSQELEFIAD-ILNQ----------DAKNYHAWQHRQWVIQE 194
>UNIPROTKB|F1NCZ7 [details] [associations]
symbol:PHLPP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001932 Pfam:PF00481 PROSITE:PS51450
SMART:SM00332 GO:GO:0005737 GO:GO:0003824 Gene3D:2.30.29.30
InterPro:IPR011993 InterPro:IPR003591 SMART:SM00369 GO:GO:0008152
InterPro:IPR025875 Pfam:PF12799 Gene3D:3.60.40.10 SUPFAM:SSF81606
GeneTree:ENSGT00440000037833 OMA:DLSCYSL EMBL:AADN02054200
IPI:IPI00596802 Ensembl:ENSGALT00000001289 Uniprot:F1NCZ7
Length = 1209
Score = 125 (49.1 bits), Expect = 0.00046, P = 0.00046
Identities = 52/186 (27%), Positives = 91/186 (48%)
Query: 329 ILKRFDLLKTLDPLRLNYYK---DSESKYKIETFIQTNPRANQITNLSSLQLTSIHHMHC 385
+L R + +K++D N + D+ K T++ R NQ+T+L L S+ +HC
Sbjct: 316 VLNRMNHVKSVDLRLNNLKRAAADTLEGNKSVTYMDL--RDNQLTDLDLSSLGSLEQLHC 373
Query: 386 FAH-CKQVDLSNNPL-----TNNCLRHLT--PLVA-CESLKLTHCSLSSLHVFP-HLPSL 435
+ K++ LS L NNCL ++ P+ L+L H + + + L
Sbjct: 374 ERNKLKELTLSGFSLRALYANNNCLTSVSVYPVPGQLTCLELAHNQMQCVPDWACEAKKL 433
Query: 436 ESLDVSHNA----PNIILC-VYFQSLKLTHCSLSSLH-VFPHLPSLESLDVSHNAIDHIE 489
E LD+S+N P+ IL + + L + H +L SL + H+P +E LD+ HN + +
Sbjct: 434 EILDMSYNLLVELPSRILSSLSLRKLTVGHNNLQSLPPLLEHIP-MEVLDLQHNLLTKLP 492
Query: 490 DSVFAK 495
+++F K
Sbjct: 493 ETLFVK 498
>UNIPROTKB|F1PEG1 [details] [associations]
symbol:PTAR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0018342 "protein prenylation" evidence=IEA]
[GO:0008318 "protein prenyltransferase activity" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 GO:GO:0008318
GO:GO:0018342 CTD:375743 GeneTree:ENSGT00390000017892 KO:K14137
EMBL:AAEX03000572 RefSeq:XP_859263.2 Ensembl:ENSCAFT00000002994
GeneID:484173 KEGG:cfa:484173 Uniprot:F1PEG1
Length = 402
Score = 119 (46.9 bits), Expect = 0.00047, P = 0.00047
Identities = 51/191 (26%), Positives = 82/191 (42%)
Query: 23 WYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELH 82
+ HN + ++ RK DE + +T +L PD + WN RKE++L TL +
Sbjct: 67 YVHNKL-LLYRTRKQWLNKDELIDVTCTLLLLNPDFTTAWNVRKELIL--SGTL--NPIK 121
Query: 83 ELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHI---SRAPNY----------------- 122
+L +L LTK PKS TW R +VL + + P++
Sbjct: 122 DLYLGKLALTKF-----PKSPETWIHRRWVLQQLIQETSLPSFMMKGNLGTIPAERTQRL 176
Query: 123 -EKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLK----ELNYSTEKIEANFSNYSA 177
+ELE+C N++ W +R +V +K EL+ + + S++S
Sbjct: 177 IREELEVCGEAAGRYPSNYNAWSHRIWVLQHLAKLDVKILLDELSSTKHWASMHVSDHSG 236
Query: 178 WHYRSKLLPLL 188
+HYR LL L
Sbjct: 237 FHYRQFLLKSL 247
>UNIPROTKB|J9P4Q0 [details] [associations]
symbol:PTAR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0018342 "protein prenylation" evidence=IEA]
[GO:0008318 "protein prenyltransferase activity" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 GO:GO:0008318
GO:GO:0018342 GeneTree:ENSGT00390000017892 OMA:TRKQWLN
EMBL:AAEX03000572 Ensembl:ENSCAFT00000047524 Uniprot:J9P4Q0
Length = 429
Score = 119 (46.9 bits), Expect = 0.00052, P = 0.00052
Identities = 51/191 (26%), Positives = 82/191 (42%)
Query: 23 WYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELH 82
+ HN + ++ RK DE + +T +L PD + WN RKE++L TL +
Sbjct: 67 YVHNKL-LLYRTRKQWLNKDELIDVTCTLLLLNPDFTTAWNVRKELIL--SGTL--NPIK 121
Query: 83 ELVDRELKLTKDCLLAQPKSYGTWFQRCYVLDHI---SRAPNY----------------- 122
+L +L LTK PKS TW R +VL + + P++
Sbjct: 122 DLYLGKLALTKF-----PKSPETWIHRRWVLQQLIQETSLPSFMMKGNLGTIPAERTQRL 176
Query: 123 -EKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLK----ELNYSTEKIEANFSNYSA 177
+ELE+C N++ W +R +V +K EL+ + + S++S
Sbjct: 177 IREELEVCGEAAGRYPSNYNAWSHRIWVLQHLAKLDVKILLDELSSTKHWASMHVSDHSG 236
Query: 178 WHYRSKLLPLL 188
+HYR LL L
Sbjct: 237 FHYRQFLLKSL 247
>UNIPROTKB|G4MNG3 [details] [associations]
symbol:MGG_16220 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147
EMBL:CM001231 GO:GO:0008318 GO:GO:0018342 RefSeq:XP_003709689.1
ProteinModelPortal:G4MNG3 EnsemblFungi:MGG_16220T0 GeneID:12985239
KEGG:mgr:MGG_16220 Uniprot:G4MNG3
Length = 509
Score = 120 (47.3 bits), Expect = 0.00053, P = 0.00053
Identities = 56/232 (24%), Positives = 98/232 (42%)
Query: 37 NQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELHELVDRELKLTKDCL 96
++EY L LT ++ P ++W YR ++ KA L + E++
Sbjct: 226 SKEYSPRCLKLTEHIISMNPAHYTVWLYRFSII---KA------LGLAIPDEIQWLNSVA 276
Query: 97 LAQPKSYGTWFQRCYVLDHI--SRAPNYEK-------ELELCNYYLELDERNFHCWDYRR 147
L K+Y W R ++D+ A + E+ E + L D +N+H W YR+
Sbjct: 277 LQHLKNYQIWHHRHLLIDNYYPKIADDKEQVARLATSERDFITTMLAEDTKNYHVWSYRQ 336
Query: 148 YVTDRHKVAPLKELNYSTEK-IEANFSNYSAWHYRSKLLPLLYPDPN-----NHLPIEQD 201
++ R + E + E I+ + N SAW +R L + DP +H E D
Sbjct: 337 FLVRRLQAWRDPEERRAVEGLIDDDVRNNSAWSHR---FFLAFTDPEQTTAGSHAT-EAD 392
Query: 202 KYV------NEFSMVESAVFTEPKDQSAWFYQRWLL---GERTSPVQIISAG 244
V E + ++ + P++QS W Y R +L G + + V+ ++G
Sbjct: 393 LAVPAAVIDEELAYAKAKIDLAPQNQSPWNYLRGVLVKGGRKLASVEEFASG 444
>UNIPROTKB|F1NK31 [details] [associations]
symbol:PTAR1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008318 "protein prenyltransferase activity"
evidence=IEA] [GO:0018342 "protein prenylation" evidence=IEA]
InterPro:IPR002088 Pfam:PF01239 PROSITE:PS51147 GO:GO:0008318
GO:GO:0018342 GeneTree:ENSGT00390000017892 OMA:TRKQWLN
EMBL:AADN02078226 EMBL:AADN02078227 IPI:IPI00587842
Ensembl:ENSGALT00000024385 ArrayExpress:F1NK31 Uniprot:F1NK31
Length = 384
Score = 117 (46.2 bits), Expect = 0.00072, P = 0.00072
Identities = 51/191 (26%), Positives = 85/191 (44%)
Query: 23 WYHNLMETIFEKRKNQEYDDEALSLTSEVLRNIPDINSLWNYRKEVLLHMKATLAEEELH 82
+ HN + ++ +RK DE + T +L PD + WN RKE++L TL+ L
Sbjct: 38 YVHNKL-LLYRQRKQWLNKDELIDTTCTLLLLNPDFTTAWNVRKELIL--SGTLSP--LK 92
Query: 83 ELVDRELKLTKDCLLAQPKSYGTWFQRCYVLD---------------HISRAPN------ 121
+L +L LTK PKS TW R +VL ++ AP
Sbjct: 93 DLHLGKLALTKF-----PKSPETWIHRRWVLQQLIQENSLPVLVNKGNLGAAPVERIHRL 147
Query: 122 YEKELELCNYYLELDERNFHCWDYRRYVTDRHKVAPLK----ELNYSTEKIEANFSNYSA 177
++E+++C+ N++ W +R +V +K EL+ + + + S++S
Sbjct: 148 VQEEMDVCSEAAGRYPSNYNAWSHRIWVLQNVGKLTIKILLDELSSTKYWVSMHVSDHSG 207
Query: 178 WHYRSKLLPLL 188
+HYR LL L
Sbjct: 208 FHYRQFLLKSL 218
>MGI|MGI:2669796 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10090
"Mus musculus" [GO:0004872 "receptor activity" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=ISO] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0031103
"axon regeneration" evidence=TAS] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0045121 "membrane raft" evidence=ISO]
[GO:0046658 "anchored to plasma membrane" evidence=ISO]
MGI:MGI:2669796 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658 GO:GO:0031103
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:349667 KO:K16661 EMBL:AY250220 EMBL:BC132523
EMBL:BC138154 EMBL:AK142743 EMBL:BK001303 IPI:IPI00356283
RefSeq:NP_954693.1 UniGene:Mm.389289 UniGene:Mm.86447
ProteinModelPortal:Q7M6Z0 SMR:Q7M6Z0 PhosphoSite:Q7M6Z0
PRIDE:Q7M6Z0 Ensembl:ENSMUST00000054514 GeneID:269295
KEGG:mmu:269295 InParanoid:A2RTJ0 NextBio:392775 Bgee:Q7M6Z0
CleanEx:MM_RTN4RL2 Genevestigator:Q7M6Z0
GermOnline:ENSMUSG00000050896 Uniprot:Q7M6Z0
Length = 420
Score = 117 (46.2 bits), Expect = 0.00084, P = 0.00084
Identities = 42/123 (34%), Positives = 61/123 (49%)
Query: 399 LTNNCLRHLTPLVACESLK---LTHCSLSSLH--VFPHLPSLESLDVSHNA------PNI 447
L NN +R L P +L L +LS++H F HL +LE LD+ N P+
Sbjct: 67 LQNNLIRSLRPGTFGPNLLTLWLFSNNLSTIHPGTFRHLQALEELDLGDNRHLRSLEPDT 126
Query: 448 ILCVY-FQSLKLTHCSLSSL--HVFPHLPSLESLDVSHNAIDHIEDSVFAKYEACVQVIL 504
+ QSL L C LSSL ++F L SL+ L + N++ H++D +FA + L
Sbjct: 127 FQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFL 186
Query: 505 TGN 507
GN
Sbjct: 187 HGN 189
>UNIPROTKB|H0YLG7 [details] [associations]
symbol:RABGGTA "Geranylgeranyl transferase type-2 subunit
alpha" species:9606 "Homo sapiens" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 EMBL:AL096870 GO:GO:0018344 GO:GO:0004663
HGNC:HGNC:9795 ProteinModelPortal:H0YLG7 SMR:H0YLG7
Ensembl:ENST00000560777 Bgee:H0YLG7 Uniprot:H0YLG7
Length = 176
Score = 108 (43.1 bits), Expect = 0.00086, P = 0.00086
Identities = 36/119 (30%), Positives = 59/119 (49%)
Query: 330 LKRFDLLKTLDPLRLNYYKDSESKYKIETFIQTNPRAN-QITNLSSLQLTSIHHMHCFAH 388
L+ F LK +DP+R Y D SK+ +E + A ++ +L+ LT + H+
Sbjct: 14 LQYFQTLKAVDPMRATYLDDLRSKFLLENSVLKMEYAEVRVLHLAHKDLTVLCHLEQLLL 73
Query: 389 CKQVDLSNNPLTNNCLRHLTPLVA---C-ESLKLTHCSLSSLHVFPHLPSLESLDVSHN 443
+DLS+N L R L P +A C E L+ + ++ SL +LP L+ L + +N
Sbjct: 74 VTHLDLSHNRL-----RTLPPALAALRCLEVLQASDNAIESLDGVTNLPRLQELLLCNN 127
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 522 522 0.00090 119 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 55
No. of states in DFA: 626 (67 KB)
Total size of DFA: 341 KB (2170 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 47.64u 0.09s 47.73t Elapsed: 00:00:02
Total cpu time: 47.65u 0.09s 47.74t Elapsed: 00:00:03
Start: Thu Aug 15 11:03:57 2013 End: Thu Aug 15 11:04:00 2013