Query psy13453
Match_columns 764
No_of_seqs 493 out of 4038
Neff 6.6
Searched_HMMs 46136
Date Fri Aug 16 19:49:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13453.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13453hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02590 probable tyrosine dec 100.0 1.4E-66 3.1E-71 595.0 35.4 310 445-764 49-367 (539)
2 KOG0628|consensus 100.0 5.2E-67 1.1E-71 562.4 25.4 315 450-764 1-315 (511)
3 PLN02880 tyrosine decarboxylas 100.0 9.1E-64 2E-68 570.7 33.4 308 447-764 7-319 (490)
4 KOG0629|consensus 100.0 2.4E-62 5.2E-67 520.9 22.1 319 421-763 9-332 (510)
5 PF00282 Pyridoxal_deC: Pyrido 100.0 6.4E-60 1.4E-64 522.6 24.2 274 484-764 1-274 (373)
6 TIGR03799 NOD_PanD_pyr putativ 100.0 1.1E-53 2.5E-58 489.2 30.8 306 453-764 22-345 (522)
7 TIGR03811 tyr_de_CO2_Ent tyros 100.0 6.9E-53 1.5E-57 486.6 32.6 303 449-764 13-395 (608)
8 PLN02590 probable tyrosine dec 100.0 3.3E-50 7.1E-55 460.4 25.4 257 5-273 225-536 (539)
9 COG0076 GadB Glutamate decarbo 100.0 2.2E-46 4.8E-51 422.4 28.3 282 466-764 4-288 (460)
10 PLN02263 serine decarboxylase 100.0 6.1E-46 1.3E-50 416.0 24.5 230 502-764 75-313 (470)
11 PLN02880 tyrosine decarboxylas 100.0 1E-45 2.2E-50 422.3 24.7 254 7-272 179-487 (490)
12 KOG0629|consensus 100.0 4E-42 8.7E-47 366.5 15.9 260 6-269 194-509 (510)
13 TIGR01788 Glu-decarb-GAD gluta 100.0 1.5E-40 3.2E-45 373.9 25.7 250 493-764 15-273 (431)
14 TIGR03799 NOD_PanD_pyr putativ 100.0 5.4E-41 1.2E-45 384.7 22.3 254 8-265 208-521 (522)
15 KOG0628|consensus 100.0 3.7E-38 7.9E-43 339.9 22.5 248 4-273 177-475 (511)
16 PLN03032 serine decarboxylase; 100.0 2E-37 4.4E-42 342.1 23.2 231 502-764 8-246 (374)
17 PRK02769 histidine decarboxyla 100.0 2.7E-37 5.9E-42 342.8 23.6 228 503-764 8-243 (380)
18 PF00282 Pyridoxal_deC: Pyrido 100.0 2.4E-37 5.2E-42 342.7 15.5 182 7-194 139-373 (373)
19 KOG1383|consensus 100.0 1.1E-36 2.5E-41 329.4 17.9 254 20-308 179-480 (491)
20 TIGR03811 tyr_de_CO2_Ent tyros 100.0 5.5E-36 1.2E-40 346.3 22.4 249 11-271 225-604 (608)
21 PLN02263 serine decarboxylase 100.0 2.1E-33 4.6E-38 315.0 20.9 224 4-270 173-444 (470)
22 cd06450 DOPA_deC_like DOPA dec 100.0 7.1E-32 1.5E-36 294.5 22.0 228 525-764 1-228 (345)
23 COG0076 GadB Glutamate decarbo 100.0 1.5E-32 3.2E-37 310.3 15.1 250 7-272 157-452 (460)
24 TIGR01788 Glu-decarb-GAD gluta 100.0 3E-31 6.4E-36 298.7 21.0 235 10-270 140-430 (431)
25 PLN03032 serine decarboxylase; 100.0 8.6E-30 1.9E-34 281.6 20.0 214 10-266 113-373 (374)
26 PRK02769 histidine decarboxyla 100.0 1.2E-27 2.6E-32 265.9 20.5 219 6-268 107-371 (380)
27 COG1104 NifS Cysteine sulfinat 99.9 4.3E-25 9.3E-30 240.1 19.0 207 523-764 2-214 (386)
28 PRK05367 glycine dehydrogenase 99.9 7.2E-22 1.6E-26 239.7 40.1 175 558-761 538-712 (954)
29 PRK13520 L-tyrosine decarboxyl 99.9 3E-23 6.6E-28 228.8 22.1 229 500-764 2-232 (371)
30 KOG1383|consensus 99.9 2.2E-23 4.9E-28 226.5 18.4 239 493-763 54-300 (491)
31 TIGR03812 tyr_de_CO2_Arch tyro 99.9 3.6E-22 7.8E-27 220.6 23.8 230 502-763 2-236 (373)
32 TIGR03531 selenium_SpcS O-phos 99.9 3.7E-21 8E-26 216.6 22.9 230 493-763 28-284 (444)
33 cd06450 DOPA_deC_like DOPA dec 99.8 4.6E-20 1E-24 201.5 21.1 236 10-265 97-344 (345)
34 COG0520 csdA Selenocysteine ly 99.8 5E-20 1.1E-24 206.2 19.4 203 524-764 24-236 (405)
35 TIGR00461 gcvP glycine dehydro 99.8 1.5E-19 3.4E-24 216.3 24.0 229 500-761 466-700 (939)
36 PLN02651 cysteine desulfurase 99.8 1.1E-19 2.4E-24 201.1 19.3 203 525-764 2-211 (364)
37 KOG1549|consensus 99.8 8.8E-20 1.9E-24 199.5 15.8 208 519-764 40-254 (428)
38 PRK04366 glycine dehydrogenase 99.8 7.9E-18 1.7E-22 193.2 23.7 240 484-761 35-280 (481)
39 TIGR02006 IscS cysteine desulf 99.8 2E-18 4.3E-23 193.7 18.1 204 523-764 4-215 (402)
40 TIGR03402 FeS_nifS cysteine de 99.8 3.9E-18 8.4E-23 189.4 18.7 201 525-764 2-209 (379)
41 TIGR03235 DNA_S_dndA cysteine 99.8 8.7E-18 1.9E-22 184.8 18.2 203 525-764 1-211 (353)
42 PRK14012 cysteine desulfurase; 99.8 1.8E-17 3.9E-22 186.0 18.6 204 523-764 4-217 (404)
43 cd06453 SufS_like Cysteine des 99.7 4.4E-17 9.5E-22 180.2 19.1 203 525-764 2-212 (373)
44 PRK02948 cysteine desulfurase; 99.7 4.3E-17 9.4E-22 181.2 18.6 203 525-764 3-211 (381)
45 PRK00451 glycine dehydrogenase 99.7 8E-17 1.7E-21 183.1 21.1 233 483-763 31-280 (447)
46 TIGR01979 sufS cysteine desulf 99.7 2.1E-16 4.5E-21 176.9 19.8 204 524-764 20-232 (403)
47 PF00266 Aminotran_5: Aminotra 99.7 4.2E-16 9E-21 172.8 21.7 203 525-764 2-212 (371)
48 TIGR01977 am_tr_V_EF2568 cyste 99.7 1.6E-16 3.4E-21 175.9 18.1 167 559-764 41-211 (376)
49 TIGR03403 nifS_epsilon cystein 99.7 4E-16 8.6E-21 173.6 19.9 205 525-764 2-213 (382)
50 PRK09331 Sep-tRNA:Cys-tRNA syn 99.7 5E-16 1.1E-20 173.6 19.9 167 562-764 63-232 (387)
51 PRK09295 bifunctional cysteine 99.7 6.2E-16 1.3E-20 173.6 18.4 204 524-764 25-237 (406)
52 TIGR03392 FeS_syn_CsdA cystein 99.7 2E-15 4.3E-20 169.0 19.9 205 523-764 17-230 (398)
53 cd06451 AGAT_like Alanine-glyo 99.7 1.4E-15 2.9E-20 167.3 18.1 194 528-764 3-198 (356)
54 PRK13520 L-tyrosine decarboxyl 99.7 3.1E-15 6.8E-20 165.1 19.5 220 11-267 107-369 (371)
55 PRK10874 cysteine sulfinate de 99.7 2.7E-15 5.9E-20 168.0 19.3 205 523-764 20-233 (401)
56 cd00613 GDC-P Glycine cleavage 99.6 1.4E-14 3E-19 161.7 20.4 219 504-761 3-229 (398)
57 TIGR00461 gcvP glycine dehydro 99.6 9.2E-15 2E-19 175.6 19.9 233 11-272 581-870 (939)
58 cd06452 SepCysS Sep-tRNA:Cys-t 99.6 1E-14 2.2E-19 161.2 18.4 165 564-764 46-213 (361)
59 PLN02855 Bifunctional selenocy 99.6 1.7E-14 3.7E-19 163.0 19.5 205 523-764 33-246 (424)
60 PLN02414 glycine dehydrogenase 99.6 5.3E-15 1.1E-19 179.6 16.0 168 559-759 565-736 (993)
61 cd00615 Orn_deC_like Ornithine 99.6 1.1E-14 2.3E-19 156.9 16.6 166 563-763 60-231 (294)
62 PRK12566 glycine dehydrogenase 99.6 3.1E-14 6.7E-19 170.2 20.8 237 498-764 477-716 (954)
63 TIGR03812 tyr_de_CO2_Arch tyro 99.6 4.6E-14 1E-18 156.0 18.8 218 11-265 109-372 (373)
64 cd01494 AAT_I Aspartate aminot 99.6 3E-14 6.5E-19 138.0 14.0 163 565-764 3-168 (170)
65 TIGR01814 kynureninase kynuren 99.6 7.2E-14 1.6E-18 157.1 18.6 205 521-763 26-243 (406)
66 TIGR02326 transamin_PhnW 2-ami 99.6 7.3E-14 1.6E-18 154.3 18.4 172 558-764 31-203 (363)
67 PLN02409 serine--glyoxylate am 99.6 1.2E-13 2.5E-18 155.4 19.3 197 528-764 13-213 (401)
68 PLN02724 Molybdenum cofactor s 99.5 1E-13 2.2E-18 168.4 19.3 210 523-764 35-274 (805)
69 TIGR01976 am_tr_V_VC1184 cyste 99.5 1.5E-13 3.2E-18 153.5 19.1 201 524-764 19-228 (397)
70 PTZ00094 serine hydroxymethylt 99.5 7.1E-14 1.5E-18 159.5 14.6 168 557-763 75-255 (452)
71 PRK05367 glycine dehydrogenase 99.5 3.1E-13 6.8E-18 164.9 20.2 235 11-272 593-878 (954)
72 PF01212 Beta_elim_lyase: Beta 99.5 2E-13 4.4E-18 146.7 16.3 177 547-760 18-203 (290)
73 TIGR03301 PhnW-AepZ 2-aminoeth 99.5 5.5E-13 1.2E-17 145.9 19.5 195 529-764 4-199 (355)
74 TIGR02539 SepCysS Sep-tRNA:Cys 99.5 1.4E-12 3E-17 145.0 20.8 165 564-764 53-220 (370)
75 COG2008 GLY1 Threonine aldolas 99.5 5.1E-13 1.1E-17 143.5 13.6 174 549-760 26-208 (342)
76 PLN02721 threonine aldolase 99.5 8E-13 1.7E-17 144.8 15.4 173 554-760 36-216 (353)
77 cd00609 AAT_like Aspartate ami 99.4 4E-12 8.8E-17 137.8 18.5 187 545-763 23-216 (350)
78 cd06502 TA_like Low-specificit 99.4 1.2E-12 2.6E-17 142.6 14.3 162 564-760 34-204 (338)
79 PRK13479 2-aminoethylphosphona 99.4 4.6E-12 1E-16 140.2 18.3 172 557-764 32-205 (368)
80 PRK04366 glycine dehydrogenase 99.4 3.5E-12 7.5E-17 146.7 17.5 236 11-275 164-454 (481)
81 KOG1368|consensus 99.4 1.6E-12 3.5E-17 135.1 10.8 174 551-761 49-234 (384)
82 PF01276 OKR_DC_1: Orn/Lys/Arg 99.4 2.5E-12 5.3E-17 143.6 11.8 169 562-763 66-251 (417)
83 TIGR01437 selA_rel uncharacter 99.3 3E-11 6.5E-16 134.2 18.7 173 560-764 43-220 (363)
84 PRK07179 hypothetical protein; 99.3 3.2E-11 7E-16 135.7 18.3 197 519-763 58-260 (407)
85 PRK03080 phosphoserine aminotr 99.3 1.6E-11 3.5E-16 137.1 14.5 161 556-764 42-206 (378)
86 cd06454 KBL_like KBL_like; thi 99.3 7.7E-11 1.7E-15 128.8 18.9 161 561-757 45-207 (349)
87 PRK15029 arginine decarboxylas 99.3 5.8E-11 1.2E-15 141.3 19.1 172 562-763 205-397 (755)
88 cd00616 AHBA_syn 3-amino-5-hyd 99.3 3.8E-11 8.3E-16 131.5 15.9 158 555-759 15-175 (352)
89 PRK05937 8-amino-7-oxononanoat 99.3 1E-10 2.3E-15 130.0 18.8 209 518-764 7-223 (370)
90 cd00378 SHMT Serine-glycine hy 99.3 4.5E-11 9.6E-16 133.9 15.6 169 556-763 59-235 (402)
91 TIGR03531 selenium_SpcS O-phos 99.3 1.5E-11 3.2E-16 139.2 11.5 157 11-184 155-356 (444)
92 TIGR01822 2am3keto_CoA 2-amino 99.3 1.5E-10 3.3E-15 129.2 19.4 165 563-763 84-250 (393)
93 PRK08361 aspartate aminotransf 99.3 1.4E-10 2.9E-15 129.9 18.0 189 537-757 49-242 (391)
94 KOG0630|consensus 99.3 9.3E-11 2E-15 128.2 15.8 251 11-271 234-583 (838)
95 cd06453 SufS_like Cysteine des 99.2 1.6E-10 3.5E-15 127.9 17.5 221 11-263 91-373 (373)
96 PRK00011 glyA serine hydroxyme 99.2 1.1E-10 2.5E-15 131.5 15.9 168 557-763 66-239 (416)
97 PLN03226 serine hydroxymethylt 99.2 1.7E-10 3.7E-15 132.4 17.4 170 558-763 76-256 (475)
98 COG1103 Archaea-specific pyrid 99.2 2.1E-10 4.5E-15 118.1 15.9 159 569-763 68-229 (382)
99 COG1003 GcvP Glycine cleavage 99.2 1.6E-10 3.5E-15 126.0 14.8 170 558-761 105-276 (496)
100 TIGR01979 sufS cysteine desulf 99.2 5.9E-10 1.3E-14 125.0 18.9 220 23-270 124-402 (403)
101 PRK08134 O-acetylhomoserine am 99.2 3E-10 6.4E-15 129.0 16.4 151 556-758 62-216 (433)
102 PRK13238 tnaA tryptophanase/L- 99.2 9E-10 2E-14 126.0 19.9 173 552-763 72-270 (460)
103 cd00611 PSAT_like Phosphoserin 99.2 7.8E-11 1.7E-15 130.5 10.8 192 528-764 3-204 (355)
104 PRK11658 UDP-4-amino-4-deoxy-L 99.2 9.4E-10 2E-14 122.9 18.2 157 556-758 31-188 (379)
105 PRK10874 cysteine sulfinate de 99.2 1.4E-09 3E-14 122.1 19.5 220 22-269 124-398 (401)
106 PRK06939 2-amino-3-ketobutyrat 99.1 1.2E-09 2.6E-14 121.7 18.6 168 560-763 85-254 (397)
107 TIGR03588 PseC UDP-4-keto-6-de 99.1 1.6E-09 3.4E-14 121.0 19.5 164 556-760 27-193 (380)
108 PRK13034 serine hydroxymethylt 99.1 9.8E-10 2.1E-14 124.3 17.8 167 557-762 69-241 (416)
109 PRK15399 lysine decarboxylase 99.1 9E-10 2E-14 130.0 17.9 167 563-763 196-378 (713)
110 KOG0630|consensus 99.1 1.3E-10 2.8E-15 127.1 9.5 196 559-758 162-367 (838)
111 PRK04311 selenocysteine syntha 99.1 2.9E-09 6.3E-14 121.7 21.0 156 566-764 131-304 (464)
112 TIGR00474 selA seryl-tRNA(sec) 99.1 3.3E-09 7.1E-14 120.9 21.3 158 564-764 124-299 (454)
113 TIGR01977 am_tr_V_EF2568 cyste 99.1 2.4E-09 5.2E-14 118.6 19.8 219 20-265 95-375 (376)
114 PRK06108 aspartate aminotransf 99.1 1.4E-09 3.1E-14 120.8 18.0 193 539-763 42-244 (382)
115 PRK13580 serine hydroxymethylt 99.1 4.6E-10 1E-14 127.6 13.6 191 555-763 88-296 (493)
116 PRK05764 aspartate aminotransf 99.1 2.3E-09 5E-14 119.8 18.6 194 538-763 48-250 (393)
117 PRK15400 lysine decarboxylase 99.1 1E-09 2.2E-14 129.7 16.1 166 563-762 196-377 (714)
118 TIGR01329 cysta_beta_ly_E cyst 99.1 1.7E-09 3.7E-14 120.9 15.8 150 565-763 50-205 (378)
119 PLN02414 glycine dehydrogenase 99.1 4.1E-09 8.9E-14 128.9 19.9 232 20-272 625-910 (993)
120 PRK05613 O-acetylhomoserine am 99.1 2.2E-09 4.7E-14 122.1 16.5 150 557-757 68-221 (437)
121 PRK09082 methionine aminotrans 99.1 4.1E-09 9E-14 117.8 18.2 175 552-757 61-241 (386)
122 PRK05958 8-amino-7-oxononanoat 99.1 6.7E-09 1.4E-13 115.1 19.5 159 561-757 83-244 (385)
123 TIGR02618 tyr_phenol_ly tyrosi 99.1 1.2E-08 2.7E-13 114.7 21.5 197 523-760 38-261 (450)
124 PRK13578 ornithine decarboxyla 99.0 2.7E-09 5.8E-14 126.2 16.4 170 563-763 175-366 (720)
125 TIGR03392 FeS_syn_CsdA cystein 99.0 6.5E-09 1.4E-13 116.5 18.9 218 24-269 123-395 (398)
126 PLN02271 serine hydroxymethylt 99.0 2.3E-09 5.1E-14 122.6 15.4 172 556-763 188-371 (586)
127 PRK06225 aspartate aminotransf 99.0 3.3E-09 7.2E-14 118.2 16.4 163 564-763 68-237 (380)
128 cd00614 CGS_like CGS_like: Cys 99.0 2.7E-09 5.8E-14 118.8 15.5 151 556-758 38-192 (369)
129 PRK08133 O-succinylhomoserine 99.0 3.7E-09 8E-14 118.7 16.4 150 557-758 60-213 (390)
130 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.0 4.3E-09 9.4E-14 117.4 16.5 153 565-760 34-189 (375)
131 PRK07777 aminotransferase; Val 99.0 9.3E-09 2E-13 114.9 18.9 181 552-763 55-244 (387)
132 TIGR02379 ECA_wecE TDP-4-keto- 99.0 4.6E-09 1E-13 117.3 15.7 130 557-728 30-160 (376)
133 cd00613 GDC-P Glycine cleavage 99.0 4.5E-09 9.8E-14 117.4 15.7 222 11-263 111-398 (398)
134 PRK00451 glycine dehydrogenase 99.0 3.4E-09 7.4E-14 120.8 14.2 221 11-266 157-445 (447)
135 cd06451 AGAT_like Alanine-glyo 99.0 1.2E-08 2.6E-13 112.3 18.1 220 20-266 83-354 (356)
136 PRK13237 tyrosine phenol-lyase 99.0 3.4E-08 7.4E-13 111.4 20.8 170 552-759 72-267 (460)
137 cd00617 Tnase_like Tryptophana 99.0 2E-08 4.3E-13 113.9 18.9 170 552-759 47-242 (431)
138 PRK10534 L-threonine aldolase; 99.0 1.1E-08 2.3E-13 111.9 16.1 185 534-759 12-204 (333)
139 PRK12414 putative aminotransfe 99.0 1.5E-08 3.3E-13 113.2 17.6 174 553-757 61-240 (384)
140 TIGR02006 IscS cysteine desulf 99.0 8.7E-09 1.9E-13 115.9 15.6 229 11-271 95-379 (402)
141 TIGR03402 FeS_nifS cysteine de 99.0 4.1E-08 8.8E-13 109.3 20.7 222 20-271 95-374 (379)
142 TIGR01825 gly_Cac_T_rel pyrido 99.0 1.8E-08 3.9E-13 112.1 17.7 163 558-757 74-238 (385)
143 PRK09295 bifunctional cysteine 98.9 2.5E-08 5.4E-13 112.2 18.6 219 23-268 129-403 (406)
144 PLN02483 serine palmitoyltrans 98.9 2.3E-08 5.1E-13 115.4 18.5 203 518-757 103-316 (489)
145 TIGR00858 bioF 8-amino-7-oxono 98.9 3.2E-08 7E-13 108.4 18.7 158 563-757 62-222 (360)
146 PRK05994 O-acetylhomoserine am 98.9 1.3E-08 2.9E-13 115.5 16.0 151 557-759 62-216 (427)
147 PRK08912 hypothetical protein; 98.9 3.2E-08 6.9E-13 110.6 18.8 179 553-763 58-244 (387)
148 PRK15407 lipopolysaccharide bi 98.9 1.3E-08 2.8E-13 116.0 15.8 140 557-730 62-202 (438)
149 TIGR01328 met_gam_lyase methio 98.9 1.4E-08 3E-13 114.1 15.8 152 556-759 57-212 (391)
150 TIGR01141 hisC histidinol-phos 98.9 8.9E-09 1.9E-13 113.0 14.0 162 566-763 58-222 (346)
151 TIGR01326 OAH_OAS_sulfhy OAH/O 98.9 1.4E-08 3E-13 115.1 15.8 150 556-757 55-208 (418)
152 PRK05968 hypothetical protein; 98.9 1.9E-08 4.1E-13 113.0 16.8 154 557-763 62-221 (389)
153 PRK05957 aspartate aminotransf 98.9 3.5E-08 7.6E-13 110.5 18.8 157 540-727 46-206 (389)
154 PRK07812 O-acetylhomoserine am 98.9 1.4E-08 3E-13 115.5 15.6 151 556-757 67-221 (436)
155 TIGR03403 nifS_epsilon cystein 98.9 6.9E-08 1.5E-12 107.6 21.1 225 11-271 93-377 (382)
156 COG1104 NifS Cysteine sulfinat 98.9 6.7E-08 1.4E-12 106.4 20.3 228 8-272 91-380 (386)
157 cd06452 SepCysS Sep-tRNA:Cys-t 98.9 7E-08 1.5E-12 106.8 20.8 228 20-267 92-360 (361)
158 TIGR01325 O_suc_HS_sulf O-succ 98.9 1.6E-08 3.6E-13 113.1 15.9 150 557-758 53-206 (380)
159 PRK07337 aminotransferase; Val 98.9 3.4E-08 7.3E-13 110.4 18.4 191 538-763 47-244 (388)
160 PRK08960 hypothetical protein; 98.9 2.9E-08 6.2E-13 111.1 17.6 190 539-763 50-246 (387)
161 PTZ00433 tyrosine aminotransfe 98.9 4.1E-08 8.8E-13 110.9 18.9 210 521-757 31-254 (412)
162 PLN02656 tyrosine transaminase 98.9 4.6E-08 1E-12 110.4 18.9 143 553-727 68-215 (409)
163 TIGR01821 5aminolev_synth 5-am 98.9 5.7E-08 1.2E-12 109.2 19.6 160 563-758 91-253 (402)
164 PRK06767 methionine gamma-lyas 98.9 2.2E-08 4.8E-13 112.2 16.0 156 556-763 59-220 (386)
165 PRK09331 Sep-tRNA:Cys-tRNA syn 98.9 9.9E-08 2.1E-12 106.9 21.0 230 20-269 111-381 (387)
166 PRK08248 O-acetylhomoserine am 98.9 2.1E-08 4.6E-13 113.9 15.8 151 556-758 62-216 (431)
167 PF01041 DegT_DnrJ_EryC1: DegT 98.9 3.2E-08 7E-13 109.9 16.9 153 557-756 24-179 (363)
168 PRK05939 hypothetical protein; 98.9 2.7E-08 5.8E-13 112.0 16.3 150 556-757 45-197 (397)
169 PRK08574 cystathionine gamma-s 98.9 2.3E-08 4.9E-13 112.2 15.6 153 555-759 50-205 (385)
170 PRK07503 methionine gamma-lyas 98.9 2E-08 4.3E-13 113.3 15.2 156 556-763 63-224 (403)
171 PRK08064 cystathionine beta-ly 98.9 2.1E-08 4.6E-13 112.6 15.3 155 556-763 52-212 (390)
172 PRK07504 O-succinylhomoserine 98.9 2.7E-08 5.9E-13 112.0 16.1 149 557-757 64-216 (398)
173 PLN02855 Bifunctional selenocy 98.9 5.5E-08 1.2E-12 110.2 18.7 219 23-270 138-419 (424)
174 PRK07050 cystathionine beta-ly 98.9 3E-08 6.5E-13 111.5 16.3 152 556-759 63-218 (394)
175 cd00610 OAT_like Acetyl ornith 98.9 5.8E-08 1.3E-12 109.0 18.6 173 560-763 77-271 (413)
176 PRK13392 5-aminolevulinate syn 98.9 7.1E-08 1.5E-12 108.8 19.1 157 566-758 95-254 (410)
177 PLN02509 cystathionine beta-ly 98.9 2.5E-08 5.4E-13 114.1 15.3 151 564-763 135-291 (464)
178 PRK09064 5-aminolevulinate syn 98.9 1E-07 2.2E-12 107.3 20.0 159 563-757 92-253 (407)
179 PRK00950 histidinol-phosphate 98.9 2.4E-08 5.2E-13 110.2 14.6 156 565-757 72-228 (361)
180 PRK07309 aromatic amino acid a 98.9 9.1E-08 2E-12 107.3 19.3 176 554-757 63-242 (391)
181 COG0399 WecE Predicted pyridox 98.9 7.6E-08 1.7E-12 106.5 18.2 161 557-763 33-194 (374)
182 PLN00175 aminotransferase fami 98.9 7.1E-08 1.5E-12 109.1 18.5 186 540-757 73-264 (413)
183 TIGR02617 tnaA_trp_ase tryptop 98.9 2.7E-08 5.8E-13 111.2 14.5 182 551-761 67-275 (467)
184 COG0520 csdA Selenocysteine ly 98.9 5E-08 1.1E-12 109.9 17.0 219 22-268 126-404 (405)
185 TIGR01366 serC_3 phosphoserine 98.9 1.9E-08 4.2E-13 111.7 13.3 158 555-763 34-196 (361)
186 TIGR01265 tyr_nico_aTase tyros 98.9 1.6E-07 3.5E-12 105.7 20.9 143 589-757 97-246 (403)
187 PRK06836 aspartate aminotransf 98.9 1.4E-07 3.1E-12 105.8 20.3 194 537-763 49-256 (394)
188 PRK08249 cystathionine gamma-s 98.9 3.6E-08 7.8E-13 111.0 15.4 152 555-758 61-216 (398)
189 PRK08363 alanine aminotransfer 98.9 4.7E-08 1E-12 109.7 16.3 176 554-763 66-249 (398)
190 PRK05355 3-phosphoserine/phosp 98.8 8.7E-09 1.9E-13 114.5 10.2 163 556-764 42-207 (360)
191 TIGR01324 cysta_beta_ly_B cyst 98.8 3.2E-08 7E-13 110.6 14.7 152 556-759 48-203 (377)
192 TIGR03537 DapC succinyldiamino 98.8 1.1E-07 2.4E-12 104.9 18.8 175 552-757 30-211 (350)
193 PRK07811 cystathionine gamma-s 98.8 3.3E-08 7.3E-13 110.9 14.8 152 556-759 59-214 (388)
194 PRK08861 cystathionine gamma-s 98.8 3.6E-08 7.9E-13 110.6 14.8 152 556-759 51-206 (388)
195 PLN02242 methionine gamma-lyas 98.8 5.9E-08 1.3E-12 110.0 16.6 152 556-759 74-230 (418)
196 PRK07324 transaminase; Validat 98.8 4.6E-08 9.9E-13 109.1 15.4 141 590-757 82-227 (373)
197 PRK09028 cystathionine beta-ly 98.8 4.2E-08 9E-13 110.2 15.0 149 557-757 60-212 (394)
198 PRK08114 cystathionine beta-ly 98.8 4.4E-08 9.6E-13 109.9 15.0 157 555-763 59-223 (395)
199 PRK07682 hypothetical protein; 98.8 1.4E-07 3E-12 105.1 18.8 174 552-757 51-231 (378)
200 PRK07550 hypothetical protein; 98.8 1.8E-07 3.8E-12 104.6 19.6 179 553-763 62-248 (386)
201 PRK07810 O-succinylhomoserine 98.8 7.1E-08 1.5E-12 108.8 16.4 152 555-758 67-222 (403)
202 PRK06207 aspartate aminotransf 98.8 2E-07 4.4E-12 105.1 20.1 172 553-757 73-256 (405)
203 PRK05942 aspartate aminotransf 98.8 1.7E-07 3.7E-12 105.2 18.7 180 553-763 68-255 (394)
204 PRK08776 cystathionine gamma-s 98.8 7.5E-08 1.6E-12 108.7 15.8 152 556-759 58-213 (405)
205 PRK06234 methionine gamma-lyas 98.8 1E-07 2.3E-12 107.4 16.8 156 556-763 62-225 (400)
206 TIGR01976 am_tr_V_VC1184 cyste 98.8 1.4E-07 3.1E-12 105.4 17.5 216 20-263 113-397 (397)
207 PLN00145 tyrosine/nicotianamin 98.8 1.8E-07 4E-12 106.3 18.4 142 554-727 90-236 (430)
208 PF00155 Aminotran_1_2: Aminot 98.8 1.4E-07 3E-12 104.0 16.6 181 551-757 37-226 (363)
209 PRK07671 cystathionine beta-ly 98.8 1.1E-07 2.4E-12 106.4 15.9 151 556-759 48-202 (377)
210 COG0075 Serine-pyruvate aminot 98.8 2.3E-07 5.1E-12 102.7 18.1 172 555-763 31-204 (383)
211 PRK07683 aminotransferase A; V 98.8 2.4E-07 5.1E-12 103.8 18.1 187 539-757 46-238 (387)
212 PRK06084 O-acetylhomoserine am 98.8 1.1E-07 2.4E-12 108.0 15.4 151 556-758 56-210 (425)
213 PRK13393 5-aminolevulinate syn 98.8 3.3E-07 7.2E-12 103.3 19.1 159 563-757 91-252 (406)
214 TIGR03540 DapC_direct LL-diami 98.8 4.6E-07 9.9E-12 101.1 19.9 172 554-757 63-242 (383)
215 TIGR01364 serC_1 phosphoserine 98.7 4.5E-08 9.7E-13 108.4 11.6 169 548-764 20-196 (349)
216 PRK07681 aspartate aminotransf 98.7 3.6E-07 7.9E-12 102.7 18.8 188 537-757 48-244 (399)
217 PRK06176 cystathionine gamma-s 98.7 1.6E-07 3.4E-12 105.2 15.7 151 556-759 48-202 (380)
218 PLN02651 cysteine desulfurase 98.7 2.3E-07 4.9E-12 103.0 16.7 171 11-194 91-303 (364)
219 COG0436 Aspartate/tyrosine/aro 98.7 3.8E-07 8.2E-12 102.6 18.3 189 536-756 43-240 (393)
220 PLN02376 1-aminocyclopropane-1 98.7 4.1E-07 9E-12 105.3 18.7 178 558-763 94-291 (496)
221 TIGR01814 kynureninase kynuren 98.7 8E-07 1.7E-11 100.2 20.4 220 22-266 128-404 (406)
222 PRK08045 cystathionine gamma-s 98.7 1.8E-07 4E-12 104.9 15.1 152 556-759 50-205 (386)
223 PRK14012 cysteine desulfurase; 98.7 1.8E-07 4E-12 105.2 15.2 225 11-270 97-380 (404)
224 PLN02721 threonine aldolase 98.7 4.1E-07 8.9E-12 99.7 17.6 224 20-268 89-351 (353)
225 TIGR02326 transamin_PhnW 2-ami 98.7 5.5E-07 1.2E-11 99.7 18.5 217 25-266 94-359 (363)
226 PLN02187 rooty/superroot1 98.7 6.1E-07 1.3E-11 103.1 19.4 167 557-757 107-281 (462)
227 PRK02948 cysteine desulfurase; 98.7 7.6E-07 1.6E-11 99.2 19.5 222 20-272 97-377 (381)
228 PTZ00377 alanine aminotransfer 98.7 4.2E-07 9.1E-12 104.9 17.8 150 552-726 109-263 (481)
229 PLN02822 serine palmitoyltrans 98.7 4.8E-07 1E-11 104.4 18.0 162 560-757 152-321 (481)
230 PRK03244 argD acetylornithine 98.7 6.3E-07 1.4E-11 100.6 18.6 160 565-763 88-263 (398)
231 TIGR01140 L_thr_O3P_dcar L-thr 98.7 2.7E-07 5.8E-12 101.1 14.9 153 565-763 50-206 (330)
232 TIGR03301 PhnW-AepZ 2-aminoeth 98.7 9E-07 2E-11 96.9 18.9 218 24-266 89-354 (355)
233 PRK14807 histidinol-phosphate 98.7 8.4E-07 1.8E-11 98.0 18.7 156 566-757 63-218 (351)
234 PRK08247 cystathionine gamma-s 98.7 3.1E-07 6.7E-12 102.3 15.2 151 556-759 50-204 (366)
235 PRK06348 aspartate aminotransf 98.6 9.3E-07 2E-11 98.9 18.4 173 552-757 60-239 (384)
236 PRK06107 aspartate aminotransf 98.6 6.4E-07 1.4E-11 100.9 17.0 187 539-757 51-246 (402)
237 PRK08636 aspartate aminotransf 98.6 2.1E-06 4.6E-11 96.7 20.9 179 552-757 65-253 (403)
238 PRK07568 aspartate aminotransf 98.6 1E-06 2.2E-11 98.7 18.2 176 554-762 62-246 (397)
239 PRK06702 O-acetylhomoserine am 98.6 4.4E-07 9.6E-12 103.0 15.2 152 556-758 59-214 (432)
240 TIGR02080 O_succ_thio_ly O-suc 98.6 4.5E-07 9.6E-12 101.7 15.1 152 556-759 49-204 (382)
241 PF00266 Aminotran_5: Aminotra 98.6 4.1E-07 8.9E-12 101.0 14.7 212 20-259 97-371 (371)
242 TIGR02539 SepCysS Sep-tRNA:Cys 98.6 2E-06 4.3E-11 95.9 20.1 229 20-269 99-368 (370)
243 PLN03227 serine palmitoyltrans 98.6 1.4E-06 3E-11 98.0 19.0 157 566-759 47-216 (392)
244 PLN02368 alanine transaminase 98.6 1.2E-06 2.5E-11 99.2 18.2 150 553-727 102-256 (407)
245 PRK05387 histidinol-phosphate 98.6 9.9E-07 2.1E-11 97.1 17.2 151 566-757 64-215 (353)
246 PRK09265 aminotransferase AlaT 98.6 8.8E-07 1.9E-11 99.7 17.1 140 553-726 67-213 (404)
247 PRK08068 transaminase; Reviewe 98.6 1.7E-06 3.8E-11 96.8 19.4 186 540-757 51-245 (389)
248 TIGR03576 pyridox_MJ0158 pyrid 98.6 1.7E-06 3.7E-11 95.8 18.7 198 502-758 7-210 (346)
249 PLN02231 alanine transaminase 98.6 2E-06 4.4E-11 100.4 20.2 152 551-727 161-317 (534)
250 PRK13355 bifunctional HTH-doma 98.6 8.8E-07 1.9E-11 103.2 17.0 139 554-726 181-326 (517)
251 PRK09276 LL-diaminopimelate am 98.6 2E-06 4.3E-11 96.1 19.1 168 559-757 70-244 (385)
252 PRK13479 2-aminoethylphosphona 98.6 1.8E-06 3.9E-11 95.7 17.9 225 21-269 90-363 (368)
253 TIGR01264 tyr_amTase_E tyrosin 98.6 1.4E-06 3.1E-11 97.9 17.1 141 554-727 69-214 (401)
254 PRK08175 aminotransferase; Val 98.6 4.2E-06 9.1E-11 94.0 20.4 176 552-757 61-242 (395)
255 PF05889 SLA_LP_auto_ag: Solub 98.6 3.9E-07 8.4E-12 100.3 11.6 172 561-763 55-234 (389)
256 PRK06460 hypothetical protein; 98.6 7.2E-07 1.6E-11 99.8 14.1 151 555-757 42-196 (376)
257 COG2008 GLY1 Threonine aldolas 98.6 1E-06 2.3E-11 95.3 14.6 211 27-267 92-341 (342)
258 PRK07505 hypothetical protein; 98.6 2.8E-06 6.1E-11 95.7 18.8 129 560-724 89-219 (402)
259 COG0156 BioF 7-keto-8-aminopel 98.5 1.5E-06 3.2E-11 96.9 16.2 199 517-756 41-246 (388)
260 cd06502 TA_like Low-specificit 98.5 7.7E-07 1.7E-11 97.0 13.9 224 11-265 74-337 (338)
261 PRK08056 threonine-phosphate d 98.5 1E-06 2.2E-11 97.6 14.9 155 565-757 58-217 (356)
262 PRK04870 histidinol-phosphate 98.5 2E-06 4.3E-11 95.0 16.9 154 565-753 66-219 (356)
263 PRK02731 histidinol-phosphate 98.5 6.9E-07 1.5E-11 98.9 13.1 162 566-763 71-237 (367)
264 PRK09105 putative aminotransfe 98.5 2.7E-06 5.8E-11 94.9 17.5 162 564-763 80-245 (370)
265 PRK12566 glycine dehydrogenase 98.5 3.2E-06 6.8E-11 102.5 19.1 231 20-273 600-880 (954)
266 PRK01688 histidinol-phosphate 98.5 1.2E-06 2.7E-11 96.8 14.5 157 565-757 60-218 (351)
267 PRK09148 aminotransferase; Val 98.5 4.4E-06 9.5E-11 94.3 19.1 175 552-757 62-243 (405)
268 PRK09147 succinyldiaminopimela 98.5 2.8E-06 6E-11 95.4 17.3 160 539-727 47-212 (396)
269 PRK03321 putative aminotransfe 98.5 1.9E-06 4.1E-11 95.0 15.6 129 565-727 60-190 (352)
270 PRK07582 cystathionine gamma-l 98.5 1.1E-06 2.4E-11 98.0 13.8 149 556-760 49-201 (366)
271 PLN00143 tyrosine/nicotianamin 98.5 3.3E-06 7.2E-11 95.4 17.8 158 538-727 53-216 (409)
272 cd00609 AAT_like Aspartate ami 98.5 1.4E-06 3.1E-11 94.4 13.9 216 20-264 92-349 (350)
273 PRK05166 histidinol-phosphate 98.5 1.1E-06 2.4E-11 97.8 13.1 157 566-757 75-236 (371)
274 PRK00854 rocD ornithine--oxo-a 98.5 4E-06 8.8E-11 94.2 17.6 159 565-757 86-261 (401)
275 PRK03158 histidinol-phosphate 98.5 1E-06 2.3E-11 97.3 12.6 156 566-757 68-227 (359)
276 PLN02450 1-aminocyclopropane-1 98.5 3.3E-06 7.2E-11 97.2 17.2 145 559-727 87-237 (468)
277 PRK07366 succinyldiaminopimela 98.5 6.8E-06 1.5E-10 92.0 19.1 174 552-757 62-244 (388)
278 COG0112 GlyA Glycine/serine hy 98.5 7.2E-07 1.6E-11 97.3 10.8 172 553-760 63-237 (413)
279 PF00464 SHMT: Serine hydroxym 98.5 1.2E-06 2.6E-11 97.9 12.9 177 554-763 58-242 (399)
280 PRK06290 aspartate aminotransf 98.5 6.4E-06 1.4E-10 93.2 19.0 167 558-757 81-256 (410)
281 PRK05967 cystathionine beta-ly 98.5 1.8E-06 3.9E-11 97.0 14.3 130 590-756 81-214 (395)
282 PTZ00125 ornithine aminotransf 98.5 4.4E-06 9.5E-11 93.7 17.4 169 563-763 74-259 (400)
283 PRK03317 histidinol-phosphate 98.5 4.9E-06 1.1E-10 92.4 17.6 167 558-757 65-233 (368)
284 TIGR00707 argD acetylornithine 98.5 6.6E-06 1.4E-10 91.4 18.6 170 562-763 69-250 (379)
285 PRK07269 cystathionine gamma-s 98.5 1.7E-06 3.6E-11 96.5 13.7 157 555-762 51-209 (364)
286 PRK04073 rocD ornithine--oxo-a 98.4 4.9E-06 1.1E-10 93.5 17.2 167 563-762 83-266 (396)
287 PF02347 GDC-P: Glycine cleava 98.4 7.3E-06 1.6E-10 92.2 18.2 229 483-762 31-267 (429)
288 TIGR01885 Orn_aminotrans ornit 98.4 1.4E-05 3E-10 90.0 20.7 164 562-757 79-260 (401)
289 TIGR03538 DapC_gpp succinyldia 98.4 6.4E-06 1.4E-10 92.4 16.5 147 553-727 59-211 (393)
290 PRK04635 histidinol-phosphate 98.4 2.6E-06 5.6E-11 94.3 13.0 155 566-757 64-219 (354)
291 PRK07908 hypothetical protein; 98.4 8.5E-06 1.8E-10 89.8 16.9 153 566-763 62-216 (349)
292 PRK03967 histidinol-phosphate 98.4 1.6E-05 3.5E-10 87.4 18.5 151 566-757 59-209 (337)
293 PLN02607 1-aminocyclopropane-1 98.4 8.5E-06 1.9E-10 93.3 16.7 174 559-757 96-284 (447)
294 PRK03715 argD acetylornithine 98.4 1E-05 2.2E-10 91.2 17.0 172 561-763 77-259 (395)
295 PLN02624 ornithine-delta-amino 98.4 2E-05 4.4E-10 90.9 19.7 172 562-763 117-305 (474)
296 PRK15481 transcriptional regul 98.3 1.3E-05 2.8E-10 91.2 17.7 164 554-755 117-285 (431)
297 PRK01278 argD acetylornithine 98.3 8.9E-06 1.9E-10 91.1 15.9 169 564-762 75-254 (389)
298 PRK06434 cystathionine gamma-l 98.3 6.9E-06 1.5E-10 92.2 14.8 154 555-763 61-220 (384)
299 TIGR03246 arg_catab_astC succi 98.3 1.7E-05 3.8E-10 89.3 18.1 164 563-761 78-257 (397)
300 PLN03026 histidinol-phosphate 98.3 4.8E-06 1E-10 93.2 13.5 156 566-757 90-245 (380)
301 PRK06855 aminotransferase; Val 98.3 1.7E-05 3.8E-10 90.3 18.2 172 553-757 68-248 (433)
302 PRK02627 acetylornithine amino 98.3 1.1E-05 2.4E-10 90.3 16.3 172 561-763 80-262 (396)
303 PRK02936 argD acetylornithine 98.3 1.6E-05 3.5E-10 88.5 17.0 161 561-763 70-247 (377)
304 KOG2040|consensus 98.3 7.7E-06 1.7E-10 93.1 13.7 174 556-761 576-752 (1001)
305 PLN02409 serine--glyoxylate am 98.2 4.9E-05 1.1E-09 85.8 19.3 226 20-269 93-372 (401)
306 PRK09257 aromatic amino acid a 98.2 5.5E-05 1.2E-09 85.0 19.4 175 554-756 65-250 (396)
307 TIGR03801 asp_4_decarbox aspar 98.2 5.7E-05 1.2E-09 87.7 19.3 191 537-757 110-315 (521)
308 PTZ00094 serine hydroxymethylt 98.2 2.9E-05 6.3E-10 89.0 16.5 204 39-270 159-409 (452)
309 PRK01533 histidinol-phosphate 98.2 1.7E-05 3.6E-10 88.5 13.9 155 566-757 68-227 (366)
310 PRK03080 phosphoserine aminotr 98.2 6.1E-05 1.3E-09 84.4 18.1 214 27-270 109-374 (378)
311 cd00616 AHBA_syn 3-amino-5-hyd 98.2 3.7E-05 8E-10 84.3 16.1 216 20-264 67-352 (352)
312 PLN02955 8-amino-7-oxononanoat 98.2 8E-05 1.7E-09 85.2 19.2 170 562-758 147-325 (476)
313 PRK05093 argD bifunctional N-s 98.2 7.5E-05 1.6E-09 84.2 18.8 130 565-726 85-230 (403)
314 PRK06358 threonine-phosphate d 98.2 3.6E-05 7.8E-10 85.3 16.0 154 566-757 58-218 (354)
315 KOG0257|consensus 98.2 4.9E-05 1.1E-09 83.7 16.4 171 526-727 36-218 (420)
316 KOG2862|consensus 98.1 7.1E-05 1.5E-09 79.5 16.1 193 528-763 21-216 (385)
317 PTZ00376 aspartate aminotransf 98.1 6.9E-05 1.5E-09 84.5 17.0 148 554-727 68-222 (404)
318 COG1167 ARO8 Transcriptional r 98.1 0.00011 2.3E-09 84.6 18.4 196 536-763 106-310 (459)
319 COG1982 LdcC Arginine/lysine/o 98.1 2.2E-05 4.7E-10 90.3 12.3 164 565-762 73-242 (557)
320 PRK04260 acetylornithine amino 98.1 4.1E-05 8.9E-10 85.4 14.1 148 591-763 87-245 (375)
321 TIGR03235 DNA_S_dndA cysteine 98.1 4.1E-05 8.8E-10 84.5 13.7 162 20-193 97-300 (353)
322 PRK07590 L,L-diaminopimelate a 98.1 0.00013 2.9E-09 82.3 17.9 216 500-757 15-254 (409)
323 PRK04781 histidinol-phosphate 98.0 7.4E-05 1.6E-09 83.1 15.3 159 565-757 62-225 (364)
324 PRK09275 aspartate aminotransf 98.0 0.00019 4.2E-09 83.5 18.9 192 536-757 115-316 (527)
325 PRK08153 histidinol-phosphate 98.0 7.2E-05 1.6E-09 83.4 14.8 156 566-757 71-228 (369)
326 PRK07865 N-succinyldiaminopime 98.0 0.00016 3.5E-09 80.2 17.3 164 553-757 57-228 (364)
327 PRK05839 hypothetical protein; 98.0 8.8E-05 1.9E-09 82.8 15.2 155 538-726 41-200 (374)
328 cd06454 KBL_like KBL_like; thi 98.0 0.00021 4.5E-09 78.2 17.4 217 20-266 94-348 (349)
329 PRK08637 hypothetical protein; 98.0 0.00021 4.5E-09 80.2 17.7 117 590-727 71-197 (388)
330 PRK12381 bifunctional succinyl 98.0 0.0002 4.3E-09 81.0 17.3 164 564-762 83-262 (406)
331 PLN02672 methionine S-methyltr 98.0 0.00015 3.3E-09 89.9 17.0 135 563-727 735-875 (1082)
332 TIGR01365 serC_2 phosphoserine 98.0 6.3E-05 1.4E-09 84.1 12.6 166 550-763 27-196 (374)
333 TIGR03539 DapC_actino succinyl 97.9 0.0004 8.7E-09 77.0 18.7 132 553-725 51-186 (357)
334 PRK02610 histidinol-phosphate 97.9 0.00019 4.1E-09 80.1 16.1 168 558-757 66-239 (374)
335 PRK08354 putative aminotransfe 97.9 8.1E-05 1.8E-09 80.9 12.8 139 567-757 45-187 (311)
336 PRK06425 histidinol-phosphate 97.9 0.00012 2.7E-09 80.2 14.2 151 565-757 43-198 (332)
337 COG1003 GcvP Glycine cleavage 97.9 0.00018 3.8E-09 79.7 14.7 227 24-274 170-452 (496)
338 TIGR01822 2am3keto_CoA 2-amino 97.9 0.00085 1.8E-08 75.0 20.2 220 20-269 131-389 (393)
339 PRK05964 adenosylmethionine--8 97.9 0.00024 5.2E-09 80.8 16.0 178 561-763 84-281 (423)
340 PRK14808 histidinol-phosphate 97.9 0.00037 8E-09 76.7 16.7 151 559-757 57-207 (335)
341 PLN02452 phosphoserine transam 97.9 0.00023 5E-09 79.4 15.2 193 523-764 6-211 (365)
342 PF01053 Cys_Met_Meta_PP: Cys/ 97.9 0.00032 6.9E-09 78.9 16.2 150 556-757 53-207 (386)
343 PRK07049 methionine gamma-lyas 97.8 0.00047 1E-08 78.7 17.3 155 556-756 81-245 (427)
344 PRK07179 hypothetical protein; 97.8 0.00041 8.8E-09 78.3 16.6 215 20-269 147-398 (407)
345 COG2873 MET17 O-acetylhomoseri 97.8 0.00019 4.2E-09 78.0 12.8 151 554-756 58-212 (426)
346 PRK12403 putative aminotransfe 97.8 0.00088 1.9E-08 77.1 19.1 170 561-755 97-294 (460)
347 TIGR03372 putres_am_tran putre 97.8 0.0014 3E-08 75.1 20.1 166 561-756 116-297 (442)
348 PRK05937 8-amino-7-oxononanoat 97.8 0.00083 1.8E-08 74.9 17.6 214 20-270 104-351 (370)
349 PRK09264 diaminobutyrate--2-ox 97.8 0.0015 3.3E-08 74.4 20.0 178 561-763 81-279 (425)
350 TIGR03542 DAPAT_plant LL-diami 97.8 0.00082 1.8E-08 75.8 17.6 164 554-757 71-251 (402)
351 PLN02760 4-aminobutyrate:pyruv 97.8 0.0014 3E-08 76.3 19.6 173 561-756 132-333 (504)
352 PRK05958 8-amino-7-oxononanoat 97.8 0.0011 2.5E-08 73.4 18.3 214 20-266 132-384 (385)
353 PRK08117 4-aminobutyrate amino 97.7 0.0011 2.5E-08 75.5 18.5 172 562-762 86-286 (433)
354 PRK13580 serine hydroxymethylt 97.7 0.0007 1.5E-08 77.8 16.5 224 21-270 179-446 (493)
355 cd00611 PSAT_like Phosphoserin 97.7 0.00034 7.3E-09 77.7 13.5 210 27-266 105-353 (355)
356 PRK14809 histidinol-phosphate 97.7 0.0006 1.3E-08 75.5 15.3 159 566-762 69-233 (357)
357 KOG0259|consensus 97.7 0.0011 2.4E-08 72.4 16.5 114 589-728 127-246 (447)
358 PLN02822 serine palmitoyltrans 97.7 0.0023 5.1E-08 74.1 20.4 231 20-272 202-480 (481)
359 KOG0256|consensus 97.7 0.00072 1.6E-08 74.4 14.6 173 561-757 124-308 (471)
360 PRK06939 2-amino-3-ketobutyrat 97.7 0.002 4.4E-08 71.8 18.9 220 20-269 135-393 (397)
361 PRK07392 threonine-phosphate d 97.7 0.0018 3.8E-08 71.9 18.2 159 566-762 61-227 (360)
362 TIGR00713 hemL glutamate-1-sem 97.7 0.0015 3.1E-08 74.3 17.8 162 563-762 89-273 (423)
363 PRK05769 4-aminobutyrate amino 97.7 0.0031 6.8E-08 72.3 20.4 175 561-763 96-301 (441)
364 PRK05764 aspartate aminotransf 97.7 0.00098 2.1E-08 74.6 16.0 225 21-269 125-391 (393)
365 COG0075 Serine-pyruvate aminot 97.7 0.0021 4.6E-08 71.7 18.1 239 5-271 75-365 (383)
366 TIGR02407 ectoine_ectB diamino 97.7 0.0027 5.9E-08 72.1 19.6 178 561-763 77-275 (412)
367 PRK00011 glyA serine hydroxyme 97.7 0.00098 2.1E-08 75.3 16.0 207 38-267 140-387 (416)
368 PRK05355 3-phosphoserine/phosp 97.6 0.0007 1.5E-08 75.5 14.2 215 23-267 105-356 (360)
369 PRK09440 avtA valine--pyruvate 97.6 0.00074 1.6E-08 76.3 14.4 160 537-725 48-223 (416)
370 PRK11522 putrescine--2-oxoglut 97.6 0.0025 5.4E-08 73.4 18.5 166 561-756 123-304 (459)
371 PRK04013 argD acetylornithine/ 97.6 0.0021 4.6E-08 71.8 17.5 156 565-762 69-240 (364)
372 TIGR01437 selA_rel uncharacter 97.6 0.0012 2.7E-08 73.5 15.5 211 24-266 116-362 (363)
373 COG3844 Kynureninase [Amino ac 97.6 0.00046 1E-08 73.9 11.1 157 558-757 72-233 (407)
374 PRK04612 argD acetylornithine 97.6 0.004 8.6E-08 70.7 19.2 136 562-726 82-233 (408)
375 PLN02397 aspartate transaminas 97.6 0.0037 8E-08 71.2 19.0 92 633-727 144-240 (423)
376 TIGR01141 hisC histidinol-phos 97.6 0.0026 5.7E-08 69.8 17.2 209 22-264 105-346 (346)
377 PRK08360 4-aminobutyrate amino 97.5 0.0053 1.1E-07 70.4 20.1 173 562-763 84-284 (443)
378 COG1168 MalY Bifunctional PLP- 97.5 0.0031 6.7E-08 69.2 16.9 153 540-725 44-202 (388)
379 PRK12389 glutamate-1-semialdeh 97.5 0.003 6.5E-08 72.1 17.5 164 561-762 92-278 (428)
380 PLN00144 acetylornithine trans 97.5 0.0032 6.9E-08 70.8 17.1 175 562-763 57-247 (382)
381 PLN03226 serine hydroxymethylt 97.5 0.0023 4.9E-08 74.0 16.3 204 42-271 162-421 (475)
382 cd00378 SHMT Serine-glycine hy 97.5 0.0017 3.8E-08 72.8 15.1 214 28-267 127-383 (402)
383 PRK00062 glutamate-1-semialdeh 97.5 0.0018 3.9E-08 73.9 15.2 134 561-726 89-243 (426)
384 TIGR00700 GABAtrnsam 4-aminobu 97.5 0.0085 1.9E-07 68.2 20.2 173 563-763 77-277 (420)
385 TIGR01821 5aminolev_synth 5-am 97.5 0.0058 1.3E-07 68.8 18.7 219 20-269 140-396 (402)
386 COG1921 SelA Selenocysteine sy 97.5 0.0023 5E-08 71.0 14.8 113 639-763 119-233 (395)
387 PRK06062 hypothetical protein; 97.4 0.0071 1.5E-07 69.5 19.5 166 561-756 94-287 (451)
388 PRK05387 histidinol-phosphate 97.4 0.007 1.5E-07 66.6 18.7 209 22-267 111-351 (353)
389 PRK01688 histidinol-phosphate 97.4 0.0025 5.4E-08 70.6 14.9 205 23-263 111-350 (351)
390 PRK10534 L-threonine aldolase; 97.4 0.0021 4.6E-08 70.2 14.1 197 39-267 101-331 (333)
391 PRK05957 aspartate aminotransf 97.4 0.0063 1.4E-07 68.3 18.3 223 23-271 125-387 (389)
392 TIGR01364 serC_1 phosphoserine 97.4 0.0033 7.1E-08 69.9 15.7 212 23-267 94-346 (349)
393 PRK06541 hypothetical protein; 97.4 0.0078 1.7E-07 69.4 19.1 171 562-756 95-294 (460)
394 PRK09792 4-aminobutyrate trans 97.4 0.0076 1.6E-07 68.7 18.8 174 561-763 82-278 (421)
395 TIGR01366 serC_3 phosphoserine 97.4 0.0045 9.9E-08 69.0 16.6 203 38-269 110-360 (361)
396 COG0403 GcvP Glycine cleavage 97.4 0.0085 1.8E-07 66.7 18.0 218 498-761 55-280 (450)
397 PLN02482 glutamate-1-semialdeh 97.4 0.0055 1.2E-07 70.8 17.3 166 560-763 137-325 (474)
398 PRK08088 4-aminobutyrate amino 97.4 0.0074 1.6E-07 68.8 18.2 170 563-762 85-278 (425)
399 PLN02483 serine palmitoyltrans 97.3 0.014 2.9E-07 68.0 20.3 224 20-271 194-468 (489)
400 PRK07495 4-aminobutyrate amino 97.3 0.013 2.9E-07 66.8 19.9 141 561-726 82-244 (425)
401 PRK13360 omega amino acid--pyr 97.3 0.01 2.2E-07 68.0 19.1 170 562-755 89-287 (442)
402 PRK06108 aspartate aminotransf 97.3 0.009 2E-07 66.4 18.2 215 21-267 118-380 (382)
403 PRK00950 histidinol-phosphate 97.3 0.0035 7.6E-08 69.2 14.8 210 22-266 121-359 (361)
404 PF00155 Aminotran_1_2: Aminot 97.3 0.0047 1E-07 68.0 15.5 217 20-263 102-363 (363)
405 PRK09064 5-aminolevulinate syn 97.3 0.012 2.5E-07 66.4 18.7 220 20-270 141-398 (407)
406 PLN00145 tyrosine/nicotianamin 97.3 0.01 2.2E-07 67.7 18.3 226 24-271 154-426 (430)
407 PRK09221 beta alanine--pyruvat 97.3 0.012 2.6E-07 67.5 18.9 144 562-726 92-264 (445)
408 KOG1368|consensus 97.3 0.0019 4.1E-08 68.5 11.1 197 39-265 124-364 (384)
409 PRK07908 hypothetical protein; 97.3 0.0088 1.9E-07 66.0 17.2 206 25-267 110-345 (349)
410 PRK06058 4-aminobutyrate amino 97.3 0.016 3.5E-07 66.5 19.6 176 561-763 98-299 (443)
411 PRK07678 aminotransferase; Val 97.3 0.023 5E-07 65.4 20.7 170 562-756 89-286 (451)
412 PRK05664 threonine-phosphate d 97.2 0.003 6.6E-08 69.3 12.8 140 566-757 53-197 (330)
413 COG0079 HisC Histidinol-phosph 97.2 0.005 1.1E-07 68.6 14.0 127 566-727 61-190 (356)
414 PRK06225 aspartate aminotransf 97.2 0.013 2.9E-07 65.3 17.6 221 21-271 117-378 (380)
415 PRK07481 hypothetical protein; 97.2 0.024 5.3E-07 65.1 19.8 175 561-756 85-286 (449)
416 KOG0053|consensus 97.2 0.0028 6.1E-08 70.7 11.5 99 640-757 129-228 (409)
417 TIGR01265 tyr_nico_aTase tyros 97.2 0.017 3.6E-07 65.2 18.0 219 22-269 131-401 (403)
418 TIGR00699 GABAtrns_euk 4-amino 97.2 0.038 8.3E-07 63.8 21.1 184 557-754 100-324 (464)
419 COG3977 Alanine-alpha-ketoisov 97.1 0.0036 7.9E-08 66.5 11.4 187 538-763 53-260 (417)
420 PRK08593 4-aminobutyrate amino 97.1 0.026 5.7E-07 64.8 19.7 174 561-762 84-286 (445)
421 PF00202 Aminotran_3: Aminotra 97.1 0.018 3.9E-07 63.7 17.7 179 561-763 58-257 (339)
422 PRK12462 phosphoserine aminotr 97.1 0.004 8.7E-08 69.4 12.4 192 525-763 5-208 (364)
423 PLN03026 histidinol-phosphate 97.1 0.018 4E-07 64.5 17.9 215 22-265 137-378 (380)
424 PRK04870 histidinol-phosphate 97.1 0.016 3.4E-07 64.1 17.2 211 22-266 116-355 (356)
425 PRK13034 serine hydroxymethylt 97.1 0.016 3.4E-07 66.0 17.5 98 153-268 283-391 (416)
426 PRK07036 hypothetical protein; 97.1 0.037 8E-07 64.0 20.6 172 561-756 94-294 (466)
427 PRK06105 aminotransferase; Pro 97.1 0.017 3.8E-07 66.6 17.8 171 561-755 91-290 (460)
428 PRK05639 4-aminobutyrate amino 97.1 0.035 7.6E-07 64.0 20.3 173 562-762 96-301 (457)
429 PRK07480 putative aminotransfe 97.1 0.015 3.3E-07 66.9 17.0 171 561-755 93-291 (456)
430 TIGR00858 bioF 8-amino-7-oxono 97.1 0.019 4.2E-07 62.8 17.1 213 20-263 109-359 (360)
431 PRK06777 4-aminobutyrate amino 97.1 0.028 6E-07 64.1 18.9 172 563-762 84-277 (421)
432 PRK14807 histidinol-phosphate 97.1 0.033 7.1E-07 61.6 19.0 211 24-266 113-349 (351)
433 PRK00615 glutamate-1-semialdeh 97.1 0.0092 2E-07 68.3 14.9 165 561-762 92-279 (433)
434 PRK02731 histidinol-phosphate 97.1 0.014 3E-07 64.7 15.9 209 27-267 124-364 (367)
435 TIGR00709 dat 2,4-diaminobutyr 97.0 0.037 8.1E-07 63.5 19.7 177 561-763 81-286 (442)
436 PRK06943 adenosylmethionine--8 97.0 0.037 8E-07 63.8 19.6 169 562-755 97-294 (453)
437 PRK13393 5-aminolevulinate syn 97.0 0.032 6.9E-07 63.0 18.8 218 20-269 140-396 (406)
438 PLN02656 tyrosine transaminase 97.0 0.027 5.7E-07 63.8 18.1 226 23-269 132-403 (409)
439 PRK08361 aspartate aminotransf 97.0 0.016 3.5E-07 65.0 16.1 217 21-268 127-389 (391)
440 PRK07482 hypothetical protein; 97.0 0.032 6.9E-07 64.4 18.8 172 561-756 93-293 (461)
441 PRK06149 hypothetical protein; 97.0 0.017 3.6E-07 72.7 17.6 173 562-762 624-824 (972)
442 KOG0258|consensus 97.0 0.011 2.4E-07 64.9 13.4 149 550-725 105-259 (475)
443 cd00614 CGS_like CGS_like: Cys 97.0 0.004 8.7E-08 69.5 10.6 154 26-194 98-293 (369)
444 PRK05166 histidinol-phosphate 96.9 0.02 4.4E-07 63.8 16.0 211 23-266 124-368 (371)
445 PRK07030 adenosylmethionine--8 96.9 0.053 1.1E-06 62.7 19.7 170 561-755 89-287 (466)
446 PRK07986 adenosylmethionine--8 96.9 0.033 7.1E-07 63.7 17.6 168 562-755 86-277 (428)
447 PRK06916 adenosylmethionine--8 96.9 0.062 1.3E-06 62.0 19.9 170 561-755 98-296 (460)
448 TIGR01825 gly_Cac_T_rel pyrido 96.9 0.058 1.3E-06 60.1 19.2 219 20-269 126-381 (385)
449 PRK11658 UDP-4-amino-4-deoxy-L 96.9 0.013 2.8E-07 65.8 13.9 220 20-267 82-377 (379)
450 PRK06918 4-aminobutyrate amino 96.9 0.06 1.3E-06 61.9 19.7 174 561-763 96-299 (451)
451 PRK13355 bifunctional HTH-doma 96.9 0.036 7.9E-07 64.8 18.1 224 22-269 243-514 (517)
452 PRK06959 putative threonine-ph 96.9 0.0097 2.1E-07 65.7 12.6 145 565-757 56-203 (339)
453 COG4992 ArgD Ornithine/acetylo 96.9 0.01 2.2E-07 66.2 12.5 128 565-726 87-230 (404)
454 PLN03227 serine palmitoyltrans 96.9 0.09 2E-06 59.4 20.6 233 20-271 91-384 (392)
455 PLN02724 Molybdenum cofactor s 96.8 0.028 6E-07 69.3 17.3 171 22-195 136-393 (805)
456 PRK06082 4-aminobutyrate amino 96.8 0.048 1E-06 62.9 18.0 165 561-757 112-302 (459)
457 PRK06207 aspartate aminotransf 96.8 0.069 1.5E-06 60.4 19.0 221 22-269 137-402 (405)
458 PRK05965 hypothetical protein; 96.8 0.092 2E-06 60.6 19.8 166 561-748 89-282 (459)
459 PLN02452 phosphoserine transam 96.8 0.041 8.9E-07 61.6 16.4 226 11-269 99-363 (365)
460 COG0160 GabT 4-aminobutyrate a 96.7 0.11 2.4E-06 59.3 19.9 167 563-756 100-295 (447)
461 PRK09105 putative aminotransfe 96.7 0.032 6.8E-07 62.4 15.5 207 22-267 130-368 (370)
462 PRK04635 histidinol-phosphate 96.7 0.026 5.7E-07 62.4 14.8 206 22-265 112-351 (354)
463 PRK07324 transaminase; Validat 96.7 0.077 1.7E-06 59.3 18.6 216 22-268 115-369 (373)
464 PLN00175 aminotransferase fami 96.7 0.054 1.2E-06 61.5 17.3 219 21-267 149-411 (413)
465 PRK13392 5-aminolevulinate syn 96.7 0.088 1.9E-06 59.5 18.9 219 20-269 141-397 (410)
466 PRK05630 adenosylmethionine--8 96.7 0.073 1.6E-06 60.8 18.2 166 562-755 83-273 (422)
467 TIGR01264 tyr_amTase_E tyrosin 96.7 0.058 1.3E-06 60.7 17.3 217 23-268 131-398 (401)
468 PRK07682 hypothetical protein; 96.7 0.045 9.7E-07 61.0 16.1 220 22-269 116-376 (378)
469 KOG1549|consensus 96.7 0.023 5E-07 63.8 13.3 227 20-272 140-421 (428)
470 PRK07046 aminotransferase; Val 96.7 0.045 9.7E-07 63.1 16.3 161 561-763 114-296 (453)
471 KOG1357|consensus 96.7 0.013 2.9E-07 65.4 11.3 171 519-728 140-320 (519)
472 PRK06173 adenosylmethionine--8 96.6 0.059 1.3E-06 61.6 17.1 171 561-756 86-280 (429)
473 PRK09082 methionine aminotrans 96.6 0.03 6.6E-07 62.7 14.5 217 21-265 125-385 (386)
474 PRK03158 histidinol-phosphate 96.6 0.041 9E-07 60.8 15.3 210 23-266 117-358 (359)
475 TIGR00508 bioA adenosylmethion 96.6 0.092 2E-06 60.0 18.3 168 563-755 89-280 (427)
476 PRK04781 histidinol-phosphate 96.6 0.089 1.9E-06 58.6 17.8 215 22-267 111-361 (364)
477 COG3033 TnaA Tryptophanase [Am 96.6 0.0065 1.4E-07 66.1 8.2 125 634-759 126-275 (471)
478 PRK06917 hypothetical protein; 96.6 0.1 2.2E-06 60.1 18.7 172 561-756 73-273 (447)
479 PRK08363 alanine aminotransfer 96.6 0.08 1.7E-06 59.5 17.6 224 21-269 127-394 (398)
480 PRK06209 glutamate-1-semialdeh 96.6 0.021 4.5E-07 65.3 13.0 134 561-726 87-229 (431)
481 PRK08153 histidinol-phosphate 96.6 0.091 2E-06 58.6 17.8 218 23-270 120-366 (369)
482 KOG0634|consensus 96.6 0.017 3.8E-07 64.3 11.6 147 553-725 95-248 (472)
483 PF03841 SelA: L-seryl-tRNA se 96.6 0.0017 3.8E-08 71.5 3.7 109 644-763 104-223 (367)
484 PRK06938 diaminobutyrate--2-ox 96.5 0.11 2.3E-06 60.1 18.5 177 562-763 106-311 (464)
485 PRK07483 hypothetical protein; 96.5 0.15 3.3E-06 58.5 19.3 170 562-755 73-272 (443)
486 COG0156 BioF 7-keto-8-aminopel 96.5 0.069 1.5E-06 60.1 16.0 224 11-266 125-387 (388)
487 PRK09265 aminotransferase AlaT 96.5 0.096 2.1E-06 59.1 17.4 226 21-269 129-401 (404)
488 PRK07505 hypothetical protein; 96.5 0.11 2.4E-06 58.6 17.8 215 20-268 144-398 (402)
489 KOG3843|consensus 96.4 0.007 1.5E-07 63.2 7.0 121 634-762 106-235 (432)
490 PRK08742 adenosylmethionine--8 96.4 0.1 2.2E-06 60.5 17.4 174 562-755 107-309 (472)
491 TIGR03251 LAT_fam L-lysine 6-t 96.4 0.1 2.2E-06 59.7 17.2 152 590-749 105-286 (431)
492 COG0001 HemL Glutamate-1-semia 96.4 0.06 1.3E-06 60.7 14.7 133 560-726 91-246 (432)
493 PLN00143 tyrosine/nicotianamin 96.4 0.16 3.4E-06 57.6 18.6 229 22-272 132-407 (409)
494 PRK12414 putative aminotransfe 96.4 0.056 1.2E-06 60.6 14.7 218 21-265 124-383 (384)
495 PRK08297 L-lysine aminotransfe 96.4 0.13 2.8E-06 59.1 17.8 149 563-726 93-271 (443)
496 KOG2467|consensus 96.4 0.014 2.9E-07 63.8 9.0 174 557-764 81-264 (477)
497 PRK06931 diaminobutyrate--2-ox 96.4 0.23 5E-06 57.3 19.7 176 561-762 100-304 (459)
498 TIGR03588 PseC UDP-4-keto-6-de 96.3 0.084 1.8E-06 59.0 15.6 222 20-266 78-379 (380)
499 PRK13238 tnaA tryptophanase/L- 96.3 0.11 2.5E-06 59.9 16.8 77 20-100 124-220 (460)
500 cd00615 Orn_deC_like Ornithine 96.3 0.0086 1.9E-07 64.6 7.2 74 20-100 108-192 (294)
No 1
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=1.4e-66 Score=594.98 Aligned_cols=310 Identities=45% Similarity=0.860 Sum_probs=290.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCCCChhhHhhcCCCCCCCCCCCHHHHHHHHHHHHcCCCCCC
Q psy13453 445 SPVTPPPNEEFREFGKAAIDFIADYVDNIRE----RPVLPSVEPGYLASLVPGEMPEEGEDWRHIMRDMNTVIMPGITHW 520 (764)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~v~~i~~y~~~~~~----~~v~~~~~p~~l~~~l~~~lP~~g~~~~~il~~l~~~i~~~~~~~ 520 (764)
+++..||+++||+.+++++|++.+|++++.+ +||.+...|+++++.++.++|++|++++++++++.+.+.++.++|
T Consensus 49 ~~~~~m~~~~~r~~~~~~~d~i~~~~~~~~~~~~~~pv~~~~~p~~l~~~l~~~~P~~g~~~~~il~~~~~~i~p~~~~~ 128 (539)
T PLN02590 49 VKMKPMDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESLKELLDDVSKKIMPGITHW 128 (539)
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCCChHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCCcC
Confidence 3445599999999999999999999999876 799999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHH
Q psy13453 521 QSPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEA 600 (764)
Q Consensus 521 ~~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeA 600 (764)
+||+||+|++++++++++++|++++++|+++++|+.+|++++||+++++||++++|+|++|. ..+.++|+||+|||+|
T Consensus 129 ~hP~f~a~~~~~~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~--~~~~~gG~~~sGgSeA 206 (539)
T PLN02590 129 QSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFL--STGNGGGVIQGTGCEA 206 (539)
T ss_pred CCCCeeEeccCCCcHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccc--cCCCCceEEcCchHHH
Confidence 99999999999999999999999999999999999999999999999999999999998765 2344789999999999
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCC---ceEEEecC--CCCcccHHHHHHHH
Q psy13453 601 TLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDV---PVRQLRSD--DNGVLRGDALLTAV 675 (764)
Q Consensus 601 Nl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl---~v~~Vp~d--~~g~md~~~Le~~I 675 (764)
|++||.+||++..+..+.. ..+++++|+|+++|||+.|||+++|+ +++.||+| ++++||+++|+++|
T Consensus 207 nl~al~aAR~~~~~~~g~~--------~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I 278 (539)
T PLN02590 207 VLVVVLAARDRILKKVGKT--------LLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAI 278 (539)
T ss_pred HHHHHHHHHHHHHhhhccc--------CCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHH
Confidence 9999999999876543221 24678999999999999999999999 69999998 46899999999999
Q ss_pred HHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCC
Q psy13453 676 KEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLL 755 (764)
Q Consensus 676 ~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~ 755 (764)
++++++|.+|++||+|+|||.+|+||||++|+++|++||+||||||||||+++++|+++++++|+|+||||++|+||||+
T Consensus 279 ~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~ 358 (539)
T PLN02590 279 SHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLF 358 (539)
T ss_pred HHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCceeeC
Q psy13453 756 VNFDCSAMW 764 (764)
Q Consensus 756 ~P~~~g~l~ 764 (764)
+|++||++|
T Consensus 359 ~p~~cg~ll 367 (539)
T PLN02590 359 ANQTCSPLW 367 (539)
T ss_pred cCcCEEEEE
Confidence 999999986
No 2
>KOG0628|consensus
Probab=100.00 E-value=5.2e-67 Score=562.37 Aligned_cols=315 Identities=60% Similarity=1.092 Sum_probs=308.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhHhhcCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCcccccc
Q psy13453 450 PPNEEFREFGKAAIDFIADYVDNIRERPVLPSVEPGYLASLVPGEMPEEGEDWRHIMRDMNTVIMPGITHWQSPQFNAYF 529 (764)
Q Consensus 450 ~~~~~~~~~~~~~v~~i~~y~~~~~~~~v~~~~~p~~l~~~l~~~lP~~g~~~~~il~~l~~~i~~~~~~~~~P~~~~~~ 529 (764)
|+.++||+.++++||+|++|++++++++|+|.++|+++++.+|...|++|+++++|++|+.+.|+|+++||+||+||+|+
T Consensus 1 Md~~efR~~gk~mVD~IadY~e~ir~r~v~P~v~PGYl~~llP~~aPe~pE~~~~Il~D~ekiI~PGitHw~hP~fhAyf 80 (511)
T KOG0628|consen 1 MDSEEFREEGKEMVDYIADYLENIRKRRVLPDVKPGYLRDLLPSKAPEKPESWEDILGDLEKIIMPGITHWQHPHFHAYF 80 (511)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCcchhhhhCCCCCCCChhhHHHHHHHHHHHccCCCcccCCCceeeEc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHH
Q psy13453 530 PTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAK 609 (764)
Q Consensus 530 ~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR 609 (764)
+++.++++++||+|+.+++..+++|..+|++|+||..+++||++++++|+.|...+.++++|++.+++|++++.++.+||
T Consensus 81 pa~~s~~siladmLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR 160 (511)
T KOG0628|consen 81 PAGNSYPSILADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAAR 160 (511)
T ss_pred cCccchHHHHHHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988889999999999999999999999
Q ss_pred HHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEE
Q psy13453 610 RKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLI 689 (764)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~Vv 689 (764)
.+...+.+...|.+.++....++|+|+|+++|+|++|||.+.|+++|.+|+|+++.|+.+.|+++|++|+++|.+||+|+
T Consensus 161 ~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~ 240 (511)
T KOG0628|consen 161 TEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVC 240 (511)
T ss_pred HHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEE
Confidence 99999888877778887888999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 690 ATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 690 ataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+|.|||.++++|+|++|..||+++|+||||||||+|.+++||++|.+++|||+|||+++++|||+.+.++|+.||
T Consensus 241 at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lW 315 (511)
T KOG0628|consen 241 ATLGTTSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLW 315 (511)
T ss_pred EeecCccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecce
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999997
No 3
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=9.1e-64 Score=570.71 Aligned_cols=308 Identities=47% Similarity=0.873 Sum_probs=289.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhHhhcCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCccc
Q psy13453 447 VTPPPNEEFREFGKAAIDFIADYVDNIRERPVLPSVEPGYLASLVPGEMPEEGEDWRHIMRDMNTVIMPGITHWQSPQFN 526 (764)
Q Consensus 447 ~~~~~~~~~~~~~~~~v~~i~~y~~~~~~~~v~~~~~p~~l~~~l~~~lP~~g~~~~~il~~l~~~i~~~~~~~~~P~~~ 526 (764)
+..||.++||+.++++++.+.+|++++.++||.+...|+++++.++..+|++|.+++++++++.+.+.++.++|+||+||
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~~p~~l~~~~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~ 86 (490)
T PLN02880 7 LRPMDAEQLRECGHRMVDFIADYYKSIENFPVLSQVQPGYLRELLPDSAPNQPETLDQVLDDVQAKILPGVTHWQSPNYF 86 (490)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCee
Confidence 34599999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHH
Q psy13453 527 AYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSIL 606 (764)
Q Consensus 527 ~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~ 606 (764)
+|++++++++++++|++++.+|++++.|+.+|++++||+++++|+++++|+|++|.. .+.++|+||+|||+||++||+
T Consensus 87 ~~~~~~~~~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~--~~~~gG~~tsggs~anl~al~ 164 (490)
T PLN02880 87 AYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLS--TGNGGGVIQGTASEAVLVVLL 164 (490)
T ss_pred EeccCCCcHHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhc--CCCCceEEcCccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999987642 234789999999999999999
Q ss_pred HHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCC---ceEEEecCC--CCcccHHHHHHHHHHhhhc
Q psy13453 607 VAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDV---PVRQLRSDD--NGVLRGDALLTAVKEDLAK 681 (764)
Q Consensus 607 aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl---~v~~Vp~d~--~g~md~~~Le~~I~~~~~~ 681 (764)
+||++.....+.. ..++++||+|+++|||+.|||+++|+ +++.||+|+ +++||+++|+++|++++++
T Consensus 165 ~AR~~~~~~~g~~--------~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~ 236 (490)
T PLN02880 165 AARDRVLRKVGKN--------ALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSS 236 (490)
T ss_pred HHHHHHHHHhccc--------ccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHC
Confidence 9999876543221 13578999999999999999999999 499999984 6899999999999999999
Q ss_pred CCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCce
Q psy13453 682 GLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCS 761 (764)
Q Consensus 682 G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g 761 (764)
|.+|++||+|+|||.+|++|||++|+++|++||+|+||||||||+++++++++++++|+++||||++|+||||++|++||
T Consensus 237 g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g 316 (490)
T PLN02880 237 GLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCS 316 (490)
T ss_pred CCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeC
Q psy13453 762 AMW 764 (764)
Q Consensus 762 ~l~ 764 (764)
++|
T Consensus 317 ~ll 319 (490)
T PLN02880 317 LLW 319 (490)
T ss_pred EEE
Confidence 986
No 4
>KOG0629|consensus
Probab=100.00 E-value=2.4e-62 Score=520.90 Aligned_cols=319 Identities=27% Similarity=0.396 Sum_probs=296.0
Q ss_pred CCcchhhhhhhhhhhcccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCChhhHhhcCCCCCCCC
Q psy13453 421 HSENLITLIIASDLIINSIPLTKASPVTPPPNEEFREFGKAAIDFIADYVDNIRER--PVLPSVEPGYLASLVPGEMPEE 498 (764)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~y~~~~~~~--~v~~~~~p~~l~~~l~~~lP~~ 498 (764)
+.+++.+++.++|+| |.+.. ..+..+.++.++++.+.+|.....+| +|.++++|++|++.++.++|++
T Consensus 9 ~~~~~~~~~~~~D~L----~~~~~------~~~~te~fl~~v~~~ll~~v~~~~dr~~kv~~fhhP~~L~~l~nlel~~~ 78 (510)
T KOG0629|consen 9 QTDTNATNLEARDLL----PDDVA------GEEVTEPFLRAVVDILLDYVKKGFDRSQKVLDFHHPDELKELFNLELRDQ 78 (510)
T ss_pred cccchhhhhHhhhcc----ccccC------CchhhHhhhHHHHHHHHHhhccCCcccceeecccChHHHHHHhCcccCCC
Confidence 567889999999999 54321 12333888999999999997665444 8999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCC
Q psy13453 499 GEDWRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLP 578 (764)
Q Consensus 499 g~~~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p 578 (764)
+++.++|+.++++.++++.. ++|||||++++++.++.+++++|++++.|+|+++|+.+|++..||.+++..+.++.||+
T Consensus 79 ~esl~qil~~cr~tl~y~vK-TgHprffNQl~~glD~~~Lag~wlT~t~Ntn~~TYEiAPvF~lmE~~vl~km~~ivGw~ 157 (510)
T KOG0629|consen 79 PESLAQILEDCRDTLKYSVK-TGHPRFFNQLSSGLDPIGLAGEWLTSTANTNMFTYEIAPVFVLMEEEVLAKMREIVGWE 157 (510)
T ss_pred hhhHHHHHHHHHHHHHhhhc-cCCCcchhhhccCCCHHHHHHHHHHhccCCCCceEEecceEEeehHHHHHHHHHHhCCC
Confidence 99999999999999988875 99999999999999999999999999999999999999999999999999999999998
Q ss_pred ccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCC---ce
Q psy13453 579 EEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDV---PV 655 (764)
Q Consensus 579 ~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl---~v 655 (764)
.+ ++|+|++||+.||+||+.+||.+.+++.+..|- ...|++++|+|+++|||+.|||+++|+ +|
T Consensus 158 ~~--------~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm-----~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c 224 (510)
T KOG0629|consen 158 EG--------GDGIFAPGGSISNMYAMNCARYKNFPEVKTKGM-----FALPPLILFTSEESHYSIKKAAAFLGLGTDHC 224 (510)
T ss_pred CC--------CCceecCCchhHHHHHHHHHHhhcCchhhhhhh-----hcCCcEEEEecccchhhHHHHHHHhccCCcee
Confidence 74 689999999999999999999999988766531 346799999999999999999999996 79
Q ss_pred EEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhh
Q psy13453 656 RQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAH 735 (764)
Q Consensus 656 ~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~ 735 (764)
+.|++|++|+|++++||+.|.+++++|..||+|.+|+|||+.|+||||+.|++||++|++|+||||||||+++++.++|+
T Consensus 225 ~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~ 304 (510)
T KOG0629|consen 225 IKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRH 304 (510)
T ss_pred EEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 736 LKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 736 ~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
++.|+|+|||+||||||++++|.+||++
T Consensus 305 kl~Giera~SvtwnpHK~~gaplqCsa~ 332 (510)
T KOG0629|consen 305 KLTGIERANSVTWNPHKLMGAPLQCSAF 332 (510)
T ss_pred hccCccccCceeecHHHhhcCcchhhHH
Confidence 9999999999999999999999999975
No 5
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=6.4e-60 Score=522.61 Aligned_cols=274 Identities=42% Similarity=0.760 Sum_probs=244.9
Q ss_pred hhhHhhcCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHH
Q psy13453 484 PGYLASLVPGEMPEEGEDWRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTEL 563 (764)
Q Consensus 484 p~~l~~~l~~~lP~~g~~~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~l 563 (764)
|++|++.++.++|++|++++++++++++.+.++..+|+||+||+|+++++++++++++++++.+|+|...|+.+|++++|
T Consensus 1 P~~l~~~~~~~lp~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~ 80 (373)
T PF00282_consen 1 PGELRARLDEELPEEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPSPASILADLLASALNQNGFTWEASPAATEI 80 (373)
T ss_dssp TTSSGGGCHCCHHSSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSHHHHHH
T ss_pred ChhhhhcCccccccCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCccHHHHHHHHHHhhhcccccccccccccccc
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS 643 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S 643 (764)
|+++++|+++++|+|.++.. .+.++|+||+|||+||++|+++||+++.++.+.++.. ..+++++|+|+++|||
T Consensus 81 E~~vi~~l~~l~g~~~~~~~--~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~-----~~~~~~i~~s~~aH~S 153 (373)
T PF00282_consen 81 EREVIRWLADLFGLPESFTF--SKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVE-----EIPKPVIYVSEQAHYS 153 (373)
T ss_dssp HHHHHHHHHHHTTGSGGTTS--TTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTT-----HCSSEEEEEETTS-TH
T ss_pred hHHHHHHHHHHhCCcccccc--cCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccc-----cccccccccccccccH
Confidence 99999999999999976432 1237899999999999999999999988765544211 1457899999999999
Q ss_pred HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccc
Q psy13453 644 VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAY 723 (764)
Q Consensus 644 v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~ 723 (764)
+.|||+++|+.++.||+|++|+||+++|+++|+++.++|.+|++|++|+|||.+|+||||++|+++|++||+||||||||
T Consensus 154 ~~Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~ 233 (373)
T PF00282_consen 154 IEKAARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAY 233 (373)
T ss_dssp HHHHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETT
T ss_pred HHHhcceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 724 AGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 724 Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
||+++++|++++++.|+++||||++|+||||++|++||+++
T Consensus 234 gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l 274 (373)
T PF00282_consen 234 GGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLL 274 (373)
T ss_dssp GGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEE
T ss_pred cccccccccccccccccccccccccchhhhhcCCccceeEE
Confidence 99999999999999999999999999999999999999985
No 6
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=1.1e-53 Score=489.17 Aligned_cols=306 Identities=22% Similarity=0.284 Sum_probs=257.9
Q ss_pred HHHHHHHHHHHHHHHHHHHh--cCCCCCCCCCChhhHhhcCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCccccccC
Q psy13453 453 EEFREFGKAAIDFIADYVDN--IRERPVLPSVEPGYLASLVPGEMPEEGEDWRHIMRDMNTVIMPGITHWQSPQFNAYFP 530 (764)
Q Consensus 453 ~~~~~~~~~~v~~i~~y~~~--~~~~~v~~~~~p~~l~~~l~~~lP~~g~~~~~il~~l~~~i~~~~~~~~~P~~~~~~~ 530 (764)
.++.++.+++.+.+++|+.+ ...+++.+.+.+.+. ...+|++|.+.+++++++.+.+.+++++|+||+||+|++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~hP~f~g~~~ 97 (522)
T TIGR03799 22 STLGRIEQKISQNLAGFLQEHIVAIEKPLSEIEKDFS----SAEIPEQPTFVSEHTQFLLDKLVAHSVHTASPSFIGHMT 97 (522)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhccCCCchhhhhccc----ccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCeEEecc
Confidence 45667777777777777666 344566665443322 467899999999999999999999999999999999999
Q ss_pred CC-CChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCC-CccccC---CCCCCCcEEEeCChHHHHHHHH
Q psy13453 531 TG-SSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGL-PEEFLN---CSPGPGGGIIQSTASEATLVSI 605 (764)
Q Consensus 531 ~~-~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~-p~~~~~---~~~~~~~GvfTsGgTeANl~Al 605 (764)
++ +.....+++ +.+++|+|.+.|+.||++++||+++++||+++++. ++.|.. ...+.++|+||+|||+||++||
T Consensus 98 ~~~p~~~~~l~~-l~~~lN~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al 176 (522)
T TIGR03799 98 SALPYFMLPLSK-LMVALNQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITAL 176 (522)
T ss_pred CCCchHHHHHHH-HHHHhcCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHH
Confidence 97 333344677 67789999999999999999999999999999963 332311 1123478999999999999999
Q ss_pred HHHHHHHhhhhccCCCCCcccc--------ccCceEEEecCCcchhHHHHHHhCCC---ceEEEecCCCCcccHHHHHHH
Q psy13453 606 LVAKRKMINHWQSKNPSLTEND--------IRNKLVAYTSDQSNSSVEKSAIIGDV---PVRQLRSDDNGVLRGDALLTA 674 (764)
Q Consensus 606 ~aAR~~~~~~~~~~~~~~~~~~--------~~~~~vi~~S~~aH~Sv~kAa~~lGl---~v~~Vp~d~~g~md~~~Le~~ 674 (764)
++||++.++..+.. .++...+ ..++++||+|+.+|+|+.|+++++|+ +++.||+|++|+||+++|+++
T Consensus 177 ~~AR~~~~~~~~~~-~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~ 255 (522)
T TIGR03799 177 WVARNRLLKADGDF-KGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDK 255 (522)
T ss_pred HHHHHHhccccccc-cccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHH
Confidence 99999876542210 1111111 23578999999999999999999999 799999999999999999999
Q ss_pred HHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccC
Q psy13453 675 VKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWL 754 (764)
Q Consensus 675 I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l 754 (764)
|+++.++|.+|++|++|+|||++|++|||++|+++|++||+||||||||||+.+++++++++++|+++||||++|+||||
T Consensus 256 i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l 335 (522)
T TIGR03799 256 CAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQL 335 (522)
T ss_pred HHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCceeeC
Q psy13453 755 LVNFDCSAMW 764 (764)
Q Consensus 755 ~~P~~~g~l~ 764 (764)
++|++||++|
T Consensus 336 ~~P~g~G~ll 345 (522)
T TIGR03799 336 YVPMGAGMVL 345 (522)
T ss_pred CcCcccEEEE
Confidence 9999999985
No 7
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=6.9e-53 Score=486.58 Aligned_cols=303 Identities=17% Similarity=0.221 Sum_probs=258.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhHhhcCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCC-cccc
Q psy13453 449 PPPNEEFREFGKAAIDFIADYVDNIRERPVLPSVEPGYLASLVPGEMPEEGEDWRHIMRDMNTVIMPGITHWQSP-QFNA 527 (764)
Q Consensus 449 ~~~~~~~~~~~~~~v~~i~~y~~~~~~~~v~~~~~p~~l~~~l~~~lP~~g~~~~~il~~l~~~i~~~~~~~~~P-~~~~ 527 (764)
..|.+.|++++.++++.+.++.++.... -.+..++.+++. ..+.+...+++++++++.+.+.+++++|+|| ||++
T Consensus 13 ~en~~~~~~~~~~~~~~~~~~r~~~~p~-d~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~l~~~sv~~~~P~ry~g 88 (608)
T TIGR03811 13 AENGQLYKDLLNKLVDEHLGWRQNYMPQ-DKPVISPQERTS---KSFTKTVNNMKDVLDELSSRLRTESVPWHSAGRYWG 88 (608)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHhcCCC-CCCCCCHHHhcc---cccccCccCHHHHHHHHHHHHhcCCCCCCCccceEE
Confidence 4567889999999999999999883221 113456666555 3456667789999999999999999999999 9999
Q ss_pred ccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHH
Q psy13453 528 YFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILV 607 (764)
Q Consensus 528 ~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~a 607 (764)
|+++++++++++|+++++.+|+|+..|+.||+++.||+++++||++++|+++ ++|+||+|||+||++||++
T Consensus 89 hm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~---------~~G~~TsGGT~ANl~aL~~ 159 (608)
T TIGR03811 89 HMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKN---------GWGHIVADGSLANLEGLWY 159 (608)
T ss_pred ECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCC---------CCeEEeCChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999986 5799999999999999999
Q ss_pred HHHHHh-h----hhcc------CCCCC----------------------cc-----ccccCce-EEEecCCcchhHHHHH
Q psy13453 608 AKRKMI-N----HWQS------KNPSL----------------------TE-----NDIRNKL-VAYTSDQSNSSVEKSA 648 (764)
Q Consensus 608 AR~~~~-~----~~~~------~~~~~----------------------~~-----~~~~~~~-vi~~S~~aH~Sv~kAa 648 (764)
||+.+. + ..+. .+++. .. +....++ ++++|+.+|||+.|||
T Consensus 160 AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa 239 (608)
T TIGR03811 160 ARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAA 239 (608)
T ss_pred HHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHH
Confidence 999641 1 1000 00000 00 0011233 7999999999999999
Q ss_pred HhCCC---ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHH---HhcCC--EEEEe
Q psy13453 649 IIGDV---PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPIC---QEYNI--WLHVD 720 (764)
Q Consensus 649 ~~lGl---~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~---~~~gl--wLHVD 720 (764)
.++|+ +++.||+|+++|||+++|+++|+++.++|..|++||+|+|||.+|+||||++|+++| +++|+ |||||
T Consensus 240 ~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVD 319 (608)
T TIGR03811 240 DIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVD 319 (608)
T ss_pred HHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeee
Confidence 99999 599999999999999999999999999999999999999999999999999999999 67898 69999
Q ss_pred ccccccc--cc------------------------------cchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 721 AAYAGSA--LL------------------------------LPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 721 aA~Gg~~--l~------------------------------~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
|||||++ ++ ++++++.++|+++|||||+|+|||+++||+||+++
T Consensus 320 AAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll 395 (608)
T TIGR03811 320 AAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIV 395 (608)
T ss_pred ccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEE
Confidence 9999975 22 24678899999999999999999999999999874
No 8
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=3.3e-50 Score=460.38 Aligned_cols=257 Identities=28% Similarity=0.386 Sum_probs=232.5
Q ss_pred cccccc-ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCC--CCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccc
Q psy13453 5 SLIPKL-AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLP--DSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQ 80 (764)
Q Consensus 5 ~~~~~~-~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd--~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G 80 (764)
..+|++ +|+||+ .|||+.|||++|||+.++||.||+| ++++||+++|+++|++++++|++|++ |||||||.+|
T Consensus 225 ~~~~~~vvy~S~~---aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tG 301 (539)
T PLN02590 225 TLLPQLVVYGSDQ---THSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSA 301 (539)
T ss_pred cCCCCEEEEecCC---chHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCc
Confidence 346888 999999 8999999999999999999999999 46899999999999999999999999 6999999999
Q ss_pred cccCchhhhc-----CCCceeccc-------------------------------ccccc-ceeeeecCCCcccccccc-
Q psy13453 81 DIQSLNAPVS-----NGPLKVGGV-------------------------------LRRVY-SSCLVPRGQKSLRTTVLF- 122 (764)
Q Consensus 81 ~iDpi~~ia~-----~~wlHVDa~-------------------------------l~~~y-~s~ll~rd~~~l~~~~s~- 122 (764)
+||||++|++ ++|+||||+ ++.+| ||++++|++..+..+|+.
T Consensus 302 aiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~ 381 (539)
T PLN02590 302 AVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTN 381 (539)
T ss_pred ccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcC
Confidence 9999999997 999999993 34555 678999998665544332
Q ss_pred -------------ccccCCcccCCCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeE
Q psy13453 123 -------------HFLFQHWQIPLGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLV 189 (764)
Q Consensus 123 -------------~~d~~d~tle~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV 189 (764)
.+|+.+|+++||||+++||+|++|++||++||+++|++++++|++|+++|+++|+||++.+|++++|
T Consensus 382 ~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iV 461 (539)
T PLN02590 382 PEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLV 461 (539)
T ss_pred HHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEE
Confidence 2468899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 190 CFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 190 ~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
||||.|+... ++..|++|.+|.++|+++|.+|++.+.++|+.+||+|++||.|+++||+.+++.|.+.+++
T Consensus 462 cFr~~~~~~~---------~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~ 532 (539)
T PLN02590 462 CFRLAPVDGD---------EDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASK 532 (539)
T ss_pred EEEecCCCCC---------HHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999875321 1246889999999999999999999999999999999999999999999999999999988
Q ss_pred HHcc
Q psy13453 270 VLRG 273 (764)
Q Consensus 270 i~~~ 273 (764)
+-++
T Consensus 533 ~~~~ 536 (539)
T PLN02590 533 FTRN 536 (539)
T ss_pred hccc
Confidence 7544
No 9
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-46 Score=422.42 Aligned_cols=282 Identities=29% Similarity=0.339 Sum_probs=247.5
Q ss_pred HHHHHHhcCCCCCCCCCChhhHhhcCCCCCCCCCCCHHHHHHHHHHH-HcCCCCCCCCCccccccCCCCChHHHHHHHHH
Q psy13453 466 IADYVDNIRERPVLPSVEPGYLASLVPGEMPEEGEDWRHIMRDMNTV-IMPGITHWQSPQFNAYFPTGSSYPSIVGDMLS 544 (764)
Q Consensus 466 i~~y~~~~~~~~v~~~~~p~~l~~~l~~~lP~~g~~~~~il~~l~~~-i~~~~~~~~~P~~~~~~~~~~~~~~~lad~l~ 544 (764)
+.++......+...+...|.+-.......+|+.+.+.++++.++... +.+...++.||+++.+..+.+.++.++++.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~ 83 (460)
T COG0076 4 LIDKDMLNSKRYSGDSLSPLFGALSDSRMAPEKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLV 83 (460)
T ss_pred HHHHHHhhccCCCccccccchhhhhhhccCCccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHH
Confidence 44454444455555555665555556678999999999999999998 55666667799999999999999999999999
Q ss_pred HhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCc
Q psy13453 545 GAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLT 624 (764)
Q Consensus 545 ~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~ 624 (764)
.++|+|.+.|+.+|+++++|+++++|+++|+|+|++ +.|+||+||||||++|+++||+++.+.....+ .
T Consensus 84 ~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~--------~~G~~t~GgTean~lal~aar~~~~~~~~~~~--~- 152 (460)
T COG0076 84 SALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEE--------ASGTFTSGGTEANLLALLAARERWRKRALAES--G- 152 (460)
T ss_pred HHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCC--------CceEEEcChHHHHHHHHHHHHHHHHHHhhhcc--c-
Confidence 999999999999999999999999999999999865 68999999999999999999999875543210 0
Q ss_pred cccccCceEEEecCCcchhHHHHHHhCCCceEEEecCC-CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccH
Q psy13453 625 ENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNL 703 (764)
Q Consensus 625 ~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~-~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl 703 (764)
.....++||+|+.+|+|+.|||+++|+.++.||++. +++||+++|+++|.+++..| +||+|+|||.+|++|||
T Consensus 153 --~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g----~vV~~aGtT~~G~iDdi 226 (460)
T COG0076 153 --KPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGG----VVVGTAGTTDTGSIDDI 226 (460)
T ss_pred --ccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCccccCHHHHHHHHHhhccCc----eEEEEecCCCCCccCCH
Confidence 111234899999999999999999999999999987 89999999999999998877 89999999999999999
Q ss_pred HHHHHHHHhcCCEEEEeccccccccccchhhhh-hcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 704 EELGPICQEYNIWLHVDAAYAGSALLLPEYAHL-KRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 704 ~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~-l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
++|++||++|++||||||||||+.+++.+++.. ..++++||||++|+|||+++|++||+++
T Consensus 227 ~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il 288 (460)
T COG0076 227 EELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVL 288 (460)
T ss_pred HHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEE
Confidence 999999999999999999999999988888877 6899999999999999999999999974
No 10
>PLN02263 serine decarboxylase
Probab=100.00 E-value=6.1e-46 Score=415.96 Aligned_cols=230 Identities=18% Similarity=0.261 Sum_probs=208.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCccccccCCCCCh-HHHHHHHHHHhhcccCccccCCc---hHHHHHHHHHHHHHHHcCC
Q psy13453 502 WRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSY-PSIVGDMLSGAFGLIGFSWLSSP---ACTELEVLVMNWLGKALGL 577 (764)
Q Consensus 502 ~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~-~~~lad~l~~~lN~n~~~~~~sp---~~t~lE~~v~~~la~llG~ 577 (764)
++++|+++.+.+.++..+ ||+| +...++ ++.+++++...+|+.++.|..+| .+++||+++++|+++|+|+
T Consensus 75 ~~~~l~~~~~~~~~~~~~-----~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~ 148 (470)
T PLN02263 75 MASVLARYRKTLVERTKH-----HLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEI 148 (470)
T ss_pred HHHHHHHHHHHHHhcccc-----eeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhCC
Confidence 699999999999887654 9999 777777 89999999999999999999999 7999999999999999999
Q ss_pred CccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEE
Q psy13453 578 PEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQ 657 (764)
Q Consensus 578 p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~ 657 (764)
|++ ..+|+||+||||||++|+++||+++ ++.++|+|+++|||+.|||+++|++++.
T Consensus 149 p~~-------~~~G~vtsGGTEaNL~Al~aARe~~-----------------~~~vvy~S~~aH~Sv~KAa~llgi~~~~ 204 (470)
T PLN02263 149 EKN-------EYWGYITNCGTEGNLHGILVGREVF-----------------PDGILYASRESHYSVFKAARMYRMECVK 204 (470)
T ss_pred CCC-------CCeEEEeCcHHHHHHHHHHHHHhhc-----------------CCcEEEEcCCccHHHHHHHHhcCCcceE
Confidence 862 2479999999999999999999963 1237999999999999999999999999
Q ss_pred EecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCC-----EEEEeccccccccccch
Q psy13453 658 LRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNI-----WLHVDAAYAGSALLLPE 732 (764)
Q Consensus 658 Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~gl-----wLHVDaA~Gg~~l~~~~ 732 (764)
||+|++|+||+++|+++|.++. .+|++|++|+|||.+|+||||++|+++|++||+ ||||||||||+++++-+
T Consensus 205 Vp~d~~g~mD~~aL~~aI~~d~---~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~ 281 (470)
T PLN02263 205 VDTLVSGEIDCADFKAKLLANK---DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVK 281 (470)
T ss_pred eccCCCCcCcHHHHHHHHHhCC---CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcc
Confidence 9999999999999999998764 479999999999999999999999999999997 99999999999886655
Q ss_pred hhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 733 YAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 733 ~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
....+++.+.||||++|+|||+++|++||+++
T Consensus 282 ~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll 313 (470)
T PLN02263 282 RAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQI 313 (470)
T ss_pred cccccCCCcCccEEEECCccccCCCcCEEEEE
Confidence 55567787889999999999999999999985
No 11
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=1e-45 Score=422.34 Aligned_cols=254 Identities=32% Similarity=0.472 Sum_probs=227.9
Q ss_pred cccc-ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCC--CCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccc
Q psy13453 7 IPKL-AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPD--SEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDI 82 (764)
Q Consensus 7 ~~~~-~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~--~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~i 82 (764)
.+++ +|+||+ .|||+.|||++|||+.++|+.||+|+ +++||+++|+++|++++++|++|++ |||||||++|++
T Consensus 179 ~~~~vv~~S~~---aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~Gai 255 (490)
T PLN02880 179 LEKLVVYASDQ---THSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAV 255 (490)
T ss_pred cCCeEEEEcCC---chHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCccc
Confidence 4666 999999 89999999999999999999999985 7899999999999999999999999 799999999999
Q ss_pred cCchhhhc-----CCCceeccc-------------------------------ccccc-ceeeeecCCCcccccccc---
Q psy13453 83 QSLNAPVS-----NGPLKVGGV-------------------------------LRRVY-SSCLVPRGQKSLRTTVLF--- 122 (764)
Q Consensus 83 Dpi~~ia~-----~~wlHVDa~-------------------------------l~~~y-~s~ll~rd~~~l~~~~s~--- 122 (764)
|||++|++ ++|+||||+ ++.+| |+++++|++..+...+..
T Consensus 256 Dpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~ 335 (490)
T PLN02880 256 DPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPE 335 (490)
T ss_pred CcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHH
Confidence 99999997 999999993 34455 578888876554333322
Q ss_pred -----------ccccCCcccCCCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEE
Q psy13453 123 -----------HFLFQHWQIPLGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCF 191 (764)
Q Consensus 123 -----------~~d~~d~tle~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~F 191 (764)
.+|+.+|++++|||+++||+|++|+++|++||++++++++++|+++++.|+++|+|+++.+|++++|||
T Consensus 336 Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~F 415 (490)
T PLN02880 336 FLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCF 415 (490)
T ss_pred HhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEE
Confidence 246788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 192 RLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 192 ry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
||.|.... .+..|++|.++.++|+++|.+|++.+.++|+.+||+|+.||+|+++|++.+++.|+++++++.
T Consensus 416 r~~~~~~~---------~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~ 486 (490)
T PLN02880 416 RLVPPKNN---------EDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLL 486 (490)
T ss_pred EEeCCCCC---------hhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99874321 224688999999999999999999999999999999999999999999999999999998875
Q ss_pred c
Q psy13453 272 R 272 (764)
Q Consensus 272 ~ 272 (764)
.
T Consensus 487 ~ 487 (490)
T PLN02880 487 G 487 (490)
T ss_pred H
Confidence 4
No 12
>KOG0629|consensus
Probab=100.00 E-value=4e-42 Score=366.54 Aligned_cols=260 Identities=18% Similarity=0.210 Sum_probs=221.2
Q ss_pred ccccc-ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEE-EeeCCccccccc
Q psy13453 6 LIPKL-AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCS-GYCGRTLHQDIQ 83 (764)
Q Consensus 6 ~~~~~-~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~V-atAGTT~~G~iD 83 (764)
-+|.| +|+||. +|||+.|||.+||+|.++++.|++|+.|+|++++||+.|-+++++|..|++| +|||||+.|++|
T Consensus 194 ~~p~lilFtSee---sHYSi~kaAa~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFD 270 (510)
T KOG0629|consen 194 ALPPLILFTSEE---SHYSIKKAAAFLGLGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFD 270 (510)
T ss_pred cCCcEEEEeccc---chhhHHHHHHHhccCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccC
Confidence 47888 999999 8999999999999999999999999999999999999999999999999997 999999999999
Q ss_pred Cchhhhc-----CCCceeccccc--------------------------cc------cceeeeecCCCccccc-------
Q psy13453 84 SLNAPVS-----NGPLKVGGVLR--------------------------RV------YSSCLVPRGQKSLRTT------- 119 (764)
Q Consensus 84 pi~~ia~-----~~wlHVDa~l~--------------------------~~------y~s~ll~rd~~~l~~~------- 119 (764)
||+.+++ ++|+||||+++ |+ -||.++.|....|...
T Consensus 271 dL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~Y 350 (510)
T KOG0629|consen 271 DLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIY 350 (510)
T ss_pred cHHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhh
Confidence 9999998 99999999531 11 1444555543322211
Q ss_pred -------cccccccCCcccCCCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC--CCceeEE
Q psy13453 120 -------VLFHFLFQHWQIPLGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCP--PSMGLVC 190 (764)
Q Consensus 120 -------~s~~~d~~d~tle~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~--P~l~iV~ 190 (764)
|.+++|-+|.++||+|+.+++|+|++|+.-|.+||++.|++++++|+||.++|++.++++++.+ |++.+||
T Consensus 351 LFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~ 430 (510)
T KOG0629|consen 351 LFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVC 430 (510)
T ss_pred hhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEe
Confidence 3346788999999999999999999999999999999999999999999999999999998875 8999999
Q ss_pred EEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCC-eeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 191 FRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQD-RLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 191 Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g-~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
|+|.|+..+...+.. .......++-..+..+|.++|..++++.++.. +.++|+++.||..+.+|++-+++.|+++++.
T Consensus 431 fw~vp~~lR~~~~~~-e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlgq~ 509 (510)
T KOG0629|consen 431 FWYVPPSLRGWQENP-ERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLGQD 509 (510)
T ss_pred eccCchHhccCcccc-hhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHhccC
Confidence 999998876532210 00111233346899999999999999988854 5799999999999999999999999998864
No 13
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=1.5e-40 Score=373.95 Aligned_cols=250 Identities=21% Similarity=0.201 Sum_probs=214.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHH
Q psy13453 493 GEMPEEGEDWRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLG 572 (764)
Q Consensus 493 ~~lP~~g~~~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la 572 (764)
.++|++|.+.+++++++.+.+.. .+..||+|++|+++++.+. +.+++..++|+|.+.+..+|..+++|+++++|++
T Consensus 15 ~~~p~~~~~~~~~~~~~~~~iyl--d~~a~~~~~~~~tt~~~p~--~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la 90 (431)
T TIGR01788 15 YRMPEEEMPPDAAYQLIHDELSL--DGNPRLNLATFVTTWMEPE--ARKLMDETINKNMIDKDEYPQTAEIENRCVNMLA 90 (431)
T ss_pred ccCCCCCCCHHHHHHHHHHHhhh--cCCcceeeeeeeCCCCCHH--HHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHH
Confidence 57999999999999999987653 4567899999998876655 6889999999998899999999999999999999
Q ss_pred HHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCC
Q psy13453 573 KALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGD 652 (764)
Q Consensus 573 ~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lG 652 (764)
+++|+++. .+..+|+||+||||||++|+.++|+++..+.+..+. ...+.+||+|+++|+|+.|+++++|
T Consensus 91 ~llg~~~~-----~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~------~~~~~~ii~s~~~H~sv~ka~~~lg 159 (431)
T TIGR01788 91 DLWHAPAK-----DAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGK------PTDKPNLVMGSNVQVCWEKFARYFD 159 (431)
T ss_pred HHhCCCCC-----CCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCC------CCCCcEEEEcCcchHHHHHHHHHcC
Confidence 99999821 012578889999999999999998764332211110 1124689999999999999999999
Q ss_pred CceEEEecCCC-CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc------CCEEEEeccccc
Q psy13453 653 VPVRQLRSDDN-GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY------NIWLHVDAAYAG 725 (764)
Q Consensus 653 l~v~~Vp~d~~-g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~------glwLHVDaA~Gg 725 (764)
++++.||+|++ ++||+++|+++|+++ +++|++|+|||++|++|||++|+++|+++ |+|+||||||||
T Consensus 160 ~~v~~i~~d~~~~~vd~~~L~~~i~~~------t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g 233 (431)
T TIGR01788 160 VELREVPMDPGRYVIDPEQVVEAVDEN------TIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGG 233 (431)
T ss_pred ceeEEEecCCCceeeCHHHHHHHHhhC------CeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHH
Confidence 99999999976 699999999999865 67999999999999999999999999999 999999999999
Q ss_pred ccc--ccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 726 SAL--LLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 726 ~~l--~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+++ .+++.+..++ +++|||+++|+|||+++|+|||+||
T Consensus 234 ~~~p~~~~~~~~~~~-~~~~DSis~s~HK~~~~P~g~G~l~ 273 (431)
T TIGR01788 234 FIAPFVYPDLEWDFR-LPRVKSINVSGHKYGLVYPGVGWVI 273 (431)
T ss_pred HHHHHhCCCchhhcC-CCCceEEEECchhccCCCCCcEEEE
Confidence 875 3566676665 7889999999999999999999986
No 14
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=5.4e-41 Score=384.73 Aligned_cols=254 Identities=19% Similarity=0.180 Sum_probs=218.3
Q ss_pred ccc-ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCc
Q psy13453 8 PKL-AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSL 85 (764)
Q Consensus 8 ~~~-~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi 85 (764)
+++ +|+|++ .|||+.|||++||+|.++|+.||+|++|+||+++|+++|+++.++|..|++ |+|+|||.+|++|||
T Consensus 208 ~~~~v~~S~~---~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl 284 (522)
T TIGR03799 208 DGLAILVSER---GHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPL 284 (522)
T ss_pred CceEEEECCC---chHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCH
Confidence 455 899999 899999999999999999999999999999999999999999999988988 699999999999999
Q ss_pred hhhhc-----CCCceeccc-------------------------------ccccc-ceeeeecCCCcccccccc------
Q psy13453 86 NAPVS-----NGPLKVGGV-------------------------------LRRVY-SSCLVPRGQKSLRTTVLF------ 122 (764)
Q Consensus 86 ~~ia~-----~~wlHVDa~-------------------------------l~~~y-~s~ll~rd~~~l~~~~s~------ 122 (764)
++|++ ++|+||||+ ++.++ |+++++|++..+. ++..
T Consensus 285 ~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~-~~~~~~~Yl~ 363 (522)
T TIGR03799 285 DEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALMS-AIEHHAEYIL 363 (522)
T ss_pred HHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHHH-HhccCcchhc
Confidence 99997 899999993 23344 4788888875432 2222
Q ss_pred ---ccccCCcccCCCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccc
Q psy13453 123 ---HFLFQHWQIPLGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWD 199 (764)
Q Consensus 123 ---~~d~~d~tle~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~ 199 (764)
..|++++++||||+++++|+|++|+++|++||++++++++++|++|++.|++.|+|+++++|++++|||||.|+...
T Consensus 364 ~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~ 443 (522)
T TIGR03799 364 RKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQ 443 (522)
T ss_pred CCCCCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhc
Confidence 23567899999999999999999999999999999999999999999999999999999999999999999987643
Q ss_pred ccc-----ccccCccCCccHHHHHHHHHHHhcCcEEEEeceeC-------CeeEEEEeccCCCCCHHHHHHHHHHHHH
Q psy13453 200 KLD-----NLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQ-------DRLFMRFAICSSQTEESDVQLGWNEIRT 265 (764)
Q Consensus 200 ~~~-----~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~-------g~~~LRi~v~np~Tt~e~i~~~l~~l~~ 265 (764)
..- +......+..|++|.+|+++|+++|.+|++.|.++ +..+||+|++||.|+++|++.++++.++
T Consensus 444 ~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~~~~ 521 (522)
T TIGR03799 444 QALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDEQRE 521 (522)
T ss_pred ccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHHhhc
Confidence 210 00011112358899999999999999999999886 4589999999999999999999988764
No 15
>KOG0628|consensus
Probab=100.00 E-value=3.7e-38 Score=339.88 Aligned_cols=248 Identities=35% Similarity=0.519 Sum_probs=230.2
Q ss_pred ccccccc-ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCccccc
Q psy13453 4 RSLIPKL-AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQD 81 (764)
Q Consensus 4 ~~~~~~~-~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~ 81 (764)
++++.+| +|+|+| +|=|++|||.+-|++. |.+|+|+++.|+.+.|+++|++|+++|.+||+ +||.|||..=+
T Consensus 177 ~~~~~~lV~Y~SDq---ahssveka~~i~~Vkl---R~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca 250 (511)
T KOG0628|consen 177 SSVLARLVAYCSDQ---AHSSVEKACLIAGVKL---RALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCA 250 (511)
T ss_pred hhhhhhheEEecCc---ccchHHHhHhhcceeE---EEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccc
Confidence 3577888 999999 8999999999999997 99999999999999999999999999999999 69999999999
Q ss_pred ccCchhhhc-----CCCceecccc--------------------------------ccccceeeeecCCCccccccccc-
Q psy13453 82 IQSLNAPVS-----NGPLKVGGVL--------------------------------RRVYSSCLVPRGQKSLRTTVLFH- 123 (764)
Q Consensus 82 iDpi~~ia~-----~~wlHVDa~l--------------------------------~~~y~s~ll~rd~~~l~~~~s~~- 123 (764)
+|+|+++.. ++|+||||+- .+..||.+++||+..+..+|+++
T Consensus 251 ~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp 330 (511)
T KOG0628|consen 251 FDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDP 330 (511)
T ss_pred cccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecCh
Confidence 999999875 9999999931 12247889999998887777653
Q ss_pred -----------cccCCcccCCCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEE
Q psy13453 124 -----------FLFQHWQIPLGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFR 192 (764)
Q Consensus 124 -----------~d~~d~tle~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fr 192 (764)
.||..|.|..|||+|+||+|+++|.||.+++++.+++.+++|+.|.+.+.+.+.||++++..+.+||||
T Consensus 331 ~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgLvcFR 410 (511)
T KOG0628|consen 331 LYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGLVCFR 410 (511)
T ss_pred HhhcchhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccceeEEe
Confidence 579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 193 LKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 193 y~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
.. +.|++|.+|.++++.+|..+++.+.++|+++||+||+.|.|+.+|++..++.|.+.+..+..
T Consensus 411 lk----------------~~N~~ne~Ll~~in~~g~i~l~~~~l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~ 474 (511)
T KOG0628|consen 411 LK----------------GDNEINEALLNRLNSSGRIHLVPASLHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELFE 474 (511)
T ss_pred ec----------------CCcHHHHHHHHHHHhcCcEEEEEeeecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 76 45889999999999999999999999999999999999999999999999999999988765
Q ss_pred c
Q psy13453 273 G 273 (764)
Q Consensus 273 ~ 273 (764)
.
T Consensus 475 ~ 475 (511)
T KOG0628|consen 475 A 475 (511)
T ss_pred h
Confidence 4
No 16
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=2e-37 Score=342.15 Aligned_cols=231 Identities=20% Similarity=0.248 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHHHHHHHHhhcccCcccc---CCchHHHHHHHHHHHHHHHcCCC
Q psy13453 502 WRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWL---SSPACTELEVLVMNWLGKALGLP 578 (764)
Q Consensus 502 ~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~---~sp~~t~lE~~v~~~la~llG~p 578 (764)
..++++.+.+.+. -++..|.||......-.+.+..++....|+.+..+. .+..+.++|+++++|+++++|++
T Consensus 8 ~~~~~~~~~~~~~-----~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~ 82 (374)
T PLN03032 8 MADILASYDKLLA-----EKSSVHFGYPYNLDFDYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELE 82 (374)
T ss_pred HHHHHHHHHHHHH-----HhhhhccCCCchhccChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCC
Confidence 4566777777653 445788899877665557777777766554333333 34479999999999999999997
Q ss_pred ccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEE
Q psy13453 579 EEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQL 658 (764)
Q Consensus 579 ~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~V 658 (764)
++ ..+|+||+||||||++|+++||+.. + +.++|+|+.+|+|+.|+++++|+.++.|
T Consensus 83 ~~-------~~~G~fTsGGTEaNl~al~~ar~~~-~----------------~~~vi~s~~~H~Sv~kaa~~lg~~~~~V 138 (374)
T PLN03032 83 KD-------EYWGYITTCGTEGNLHGILVGREVF-P----------------DGILYASRESHYSVFKAARMYRMEAVKV 138 (374)
T ss_pred Cc-------cCCEEEeCchHHHHHHHHHHHHHhC-C----------------CcEEEeCCCceeHHHHHHHHcCCCCeEe
Confidence 63 2469999999999999999998752 1 1268999999999999999999999999
Q ss_pred ecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcC-----CEEEEeccccccccccchh
Q psy13453 659 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYN-----IWLHVDAAYAGSALLLPEY 733 (764)
Q Consensus 659 p~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~g-----lwLHVDaA~Gg~~l~~~~~ 733 (764)
|+|++|+||+++|+++|+++. ..|++|++|+|||++|++|||++|+++|++|| +||||||||||+.++....
T Consensus 139 ~~d~~g~id~~~L~~~i~~~~---~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~ 215 (374)
T PLN03032 139 PTLPSGEIDYDDLERALAKNR---DKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSR 215 (374)
T ss_pred eeCCCCcCcHHHHHHHHHHcC---CCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCC
Confidence 999999999999999998753 36899999999999999999999999999996 5999999999988765333
Q ss_pred hhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 734 AHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 734 r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
...++..+.+|||++|+|||+++|++||++|
T Consensus 216 ~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll 246 (374)
T PLN03032 216 APEVTFRKPIGSVSVSGHKFLGCPMPCGVAL 246 (374)
T ss_pred CcccCCCcCCcEEEECcccccCCCcCeEEEE
Confidence 3334444578999999999999999999985
No 17
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=2.7e-37 Score=342.85 Aligned_cols=228 Identities=24% Similarity=0.316 Sum_probs=194.6
Q ss_pred HHHHHHHHHHHcCCCCCCCCCccccccCCCCCh-HHHHHHHHHHhhcccCccccCCc----hHHHHHHHHHHHHHHHcCC
Q psy13453 503 RHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSY-PSIVGDMLSGAFGLIGFSWLSSP----ACTELEVLVMNWLGKALGL 577 (764)
Q Consensus 503 ~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~-~~~lad~l~~~lN~n~~~~~~sp----~~t~lE~~v~~~la~llG~ 577 (764)
.+.|+++...+ -+||+||.+++...++ .+.+.+++....|+.+ .+...+ .+.++|+++++|+++++|+
T Consensus 8 ~~~~~~~~~~~------~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~n~g-np~~~~~~g~~~~~~e~~~~~~~a~l~g~ 80 (380)
T PRK02769 8 QKEIEDFWLYL------RHNQYFNVGYPEAADFDYSALKRFFSFSINNCG-DPYSKSNYPLNSFDFERDVMNFFAELFKI 80 (380)
T ss_pred HHHHHHHHHHH------HHhhhcccCCCchhhcCHHHHHHHHHhhhccCC-CccccCCCCCChHHHHHHHHHHHHHHhCC
Confidence 45566665554 4588888888887776 6889999988887644 444444 4899999999999999999
Q ss_pred CccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEE
Q psy13453 578 PEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQ 657 (764)
Q Consensus 578 p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~ 657 (764)
+++ ..+|+||+||||||++|+++||++. + +.+||+|+.+|+|+.|+++++|+..+.
T Consensus 81 ~~~-------~~~G~~TsGgTean~~a~~~ar~~~-~----------------~~~ii~s~~~H~Sv~ka~~~lg~~~~~ 136 (380)
T PRK02769 81 PFN-------ESWGYITNGGTEGNLYGCYLARELF-P----------------DGTLYYSKDTHYSVSKIARLLRIKSRV 136 (380)
T ss_pred CCC-------CCCEEEecChHHHHHHHHHHHHHhC-C----------------CcEEEeCCCceehHHHHHHHcCCCCce
Confidence 753 2469999999999999999998742 1 237999999999999999999999999
Q ss_pred EecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcC---CEEEEeccccccccccchhh
Q psy13453 658 LRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYN---IWLHVDAAYAGSALLLPEYA 734 (764)
Q Consensus 658 Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~g---lwLHVDaA~Gg~~l~~~~~r 734 (764)
||++++|+||+++|+++|+++ |..|++|++|+|||++|++|||++|+++|++|| +|+|||||||++.+++.+.+
T Consensus 137 V~~~~~g~id~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~ 213 (380)
T PRK02769 137 ITSLPNGEIDYDDLISKIKEN---KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNP 213 (380)
T ss_pred eccCCCCcCcHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCcc
Confidence 999999999999999999876 678999999999999999999999999999998 69999999999988776555
Q ss_pred hhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 735 HLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 735 ~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
..++..+.+||+++|+|||+++|++||++|
T Consensus 214 ~~~d~~~~vDsis~s~HK~~~~P~g~G~l~ 243 (380)
T PRK02769 214 PPFSFADGIDSIAISGHKFIGSPMPCGIVL 243 (380)
T ss_pred ccCCccCCCCEEEECCcccCCCCCCcEEEE
Confidence 555555578999999999999999999985
No 18
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=2.4e-37 Score=342.69 Aligned_cols=182 Identities=33% Similarity=0.460 Sum_probs=159.3
Q ss_pred cccc-ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccC
Q psy13453 7 IPKL-AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQS 84 (764)
Q Consensus 7 ~~~~-~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDp 84 (764)
++++ +|+||+ .|||+.|||++|||+ ++.||+|++++||+++|+++|+++.++|++|++ |+|+|||.+|++||
T Consensus 139 ~~~~~i~~s~~---aH~S~~Kaa~~lGlg---~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~ 212 (373)
T PF00282_consen 139 IPKPVIYVSEQ---AHYSIEKAARILGLG---VRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP 212 (373)
T ss_dssp CSSEEEEEETT---S-THHHHHHHHTTSE---EEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S
T ss_pred ccccccccccc---cccHHHHhcceeeeE---EEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccC
Confidence 4566 999999 899999999999999 599999999999999999999999999999977 79999999999999
Q ss_pred chhhhc-----CCCceeccc-------------------------------ccccc-ceeeeecCCCccccccccc----
Q psy13453 85 LNAPVS-----NGPLKVGGV-------------------------------LRRVY-SSCLVPRGQKSLRTTVLFH---- 123 (764)
Q Consensus 85 i~~ia~-----~~wlHVDa~-------------------------------l~~~y-~s~ll~rd~~~l~~~~s~~---- 123 (764)
|++|++ ++|+||||+ ++.+| ||++++|++..+..+++.+
T Consensus 213 l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl 292 (373)
T PF00282_consen 213 LEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYL 292 (373)
T ss_dssp HHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCT
T ss_pred HHHHhhhccccceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhh
Confidence 999987 999999983 23445 5789999998887765433
Q ss_pred ----------cccCCcccCCCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEe
Q psy13453 124 ----------FLFQHWQIPLGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRL 193 (764)
Q Consensus 124 ----------~d~~d~tle~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry 193 (764)
+++.++|++||||+++||+|++|+++|++||+++|++++++|++|++.|++.++||++++|++++|||||
T Consensus 293 ~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~ 372 (373)
T PF00282_consen 293 GNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRY 372 (373)
T ss_dssp T-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEE
T ss_pred cccccccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEe
Confidence 3466789999999999999999999999999999999999999999999999999999999999999998
Q ss_pred e
Q psy13453 194 K 194 (764)
Q Consensus 194 ~ 194 (764)
+
T Consensus 373 k 373 (373)
T PF00282_consen 373 K 373 (373)
T ss_dssp S
T ss_pred C
Confidence 4
No 19
>KOG1383|consensus
Probab=100.00 E-value=1.1e-36 Score=329.44 Aligned_cols=254 Identities=18% Similarity=0.199 Sum_probs=229.6
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC-CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc------CC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP-DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS------NG 92 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd-~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~------~~ 92 (764)
.|=++.|+|+++++.. +.||++ .+++||+.++.+.|++|+ .++|+++|+|++|.+||++++++ ++
T Consensus 179 v~~a~eK~a~yf~v~l---~~V~~~~~~~~~D~~k~~~~i~eNt-----i~lv~~~~~~p~G~~e~ve~l~~l~~e~w~i 250 (491)
T KOG1383|consen 179 VHAAFEKAARYFEVEL---REVPLDEGDYRVDPGKVVRMIDENT-----IMLVGSLPNFPTGEIEDVEKLADLLLEIWDI 250 (491)
T ss_pred HHHHHHHHHhhEEEEE---EeeeccccceEecHHHHHHHhccce-----EEEEEEcCCCCccchhhHHHHHHHHHHHhCC
Confidence 5678999999999999 999999 799999999999999973 24489999999999999999997 78
Q ss_pred Cceecccc----------------------------ccccc------eeeeecCCCccccccccccc-----cCCcccCC
Q psy13453 93 PLKVGGVL----------------------------RRVYS------SCLVPRGQKSLRTTVLFHFL-----FQHWQIPL 133 (764)
Q Consensus 93 wlHVDa~l----------------------------~~~y~------s~ll~rd~~~l~~~~s~~~d-----~~d~tle~ 133 (764)
++|||||+ .|+|+ +.+++|+++.++++|.++.| |.++|+++
T Consensus 251 piHvDa~~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~Tlng 330 (491)
T KOG1383|consen 251 PIHVDACLGGFINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNG 330 (491)
T ss_pred ceeecccCccccccccccCccccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCccccCccccc
Confidence 89999974 45664 68999999999999888765 78999999
Q ss_pred CC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCc
Q psy13453 134 GR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGD 212 (764)
Q Consensus 134 SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~ 212 (764)
|| ++..+..|++|.+||.+||++..++|++++++|++.|+++++|.++++|.++++.| +.
T Consensus 331 SR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~-------------------~s 391 (491)
T KOG1383|consen 331 SRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILF-------------------GS 391 (491)
T ss_pred CCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEc-------------------cC
Confidence 99 66666889999999999999999999999999999999999999999999999999 44
Q ss_pred cHHH-HHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCCcccCccchhhc
Q psy13453 213 NDLN-KAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLRGKSLGPAGKVMGGAQAIAG 291 (764)
Q Consensus 213 d~~n-~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~~~~~~~~~~~~~~~~a~~g 291 (764)
+.+| .++.+.|++.|| ..+.+|.+..+|+||+..+++++.+++|+.+|+++.++|...+.....++ +|+||
T Consensus 392 ~~~~i~elsd~l~~~GW---~lnalq~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~p~~~~~~~-----~a~yg 463 (491)
T KOG1383|consen 392 NDVNIFELSDLLRKKGW---ILNALQFPAAIHICVTRVHAREDVADRFVADIRKVVEELKSLPESKTHGM-----AAIYG 463 (491)
T ss_pred CccchhhhhHHHHhcCc---CccccCCCCceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhCCCcccCcc-----cchhh
Confidence 5577 799999999999 88999999999999999999999999999999999999999886544444 99999
Q ss_pred cccCCCcchhhcccccc
Q psy13453 292 TESSGPADQVLGEIQPV 308 (764)
Q Consensus 292 ~~~~~pd~~~~~~~~~~ 308 (764)
+|++.|||+++.|+.-.
T Consensus 464 ~a~~~~~~~~~~e~~~~ 480 (491)
T KOG1383|consen 464 LAQKTPDRSVVDELIVG 480 (491)
T ss_pred hhhcCCchhhHHHHHHH
Confidence 99999999999997643
No 20
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=5.5e-36 Score=346.34 Aligned_cols=249 Identities=17% Similarity=0.221 Sum_probs=204.7
Q ss_pred ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCchhhh
Q psy13453 11 AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLNAPV 89 (764)
Q Consensus 11 ~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~~ia 89 (764)
.|.|++ .|||+.|||++||||.++|+.||+|+++|||+++|+++|+++.++|..|++ |||+|||.+|+||||++|+
T Consensus 225 vl~s~~---aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~ 301 (608)
T TIGR03811 225 WLVPQT---KHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIV 301 (608)
T ss_pred EEECCC---ccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHH
Confidence 788888 899999999999999999999999999999999999999999999988877 7999999999999999986
Q ss_pred c--------CC--Cceecccc-----------------------------------------------------------
Q psy13453 90 S--------NG--PLKVGGVL----------------------------------------------------------- 100 (764)
Q Consensus 90 ~--------~~--wlHVDa~l----------------------------------------------------------- 100 (764)
+ ++ |+||||+.
T Consensus 302 ~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDp 381 (608)
T TIGR03811 302 ALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDP 381 (608)
T ss_pred HHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCc
Confidence 5 55 69999932
Q ss_pred ----cccc-ceeeeecCCCcccccccccc------------ccCCcccCCCC-cccHHHHHHHHHHc--cHHHHHHHHHH
Q psy13453 101 ----RRVY-SSCLVPRGQKSLRTTVLFHF------------LFQHWQIPLGR-RFRALKLWMTLRSY--GLKGLQAYLRK 160 (764)
Q Consensus 101 ----~~~y-~s~ll~rd~~~l~~~~s~~~------------d~~d~tle~SR-r~~ALklWatL~~l--G~eGy~~~i~~ 160 (764)
+.+| ||.+++|+++ +...++.+. ++++++++||| +++|+|+|++++.+ |++||++++++
T Consensus 382 HK~g~~Py~~G~ll~Rd~~-~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~ 460 (608)
T TIGR03811 382 HKMGYIPYSAGGIVIQDIR-MRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGA 460 (608)
T ss_pred ccccccCCCeEEEEEeCHH-HHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 1123 3678889875 333222211 24568999999 68899999999998 99999999999
Q ss_pred HHHHHHHHHHHHhc------CCCeEE--eCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHH-h-----c
Q psy13453 161 HISLAKKFADLVEQ------DDRFEL--VCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRII-A-----R 226 (764)
Q Consensus 161 ~i~lA~~l~~~I~~------~p~~el--l~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~-~-----~ 226 (764)
++++|++|++.|++ .++||+ +.+|++++|||||.|++... .+..|++|.++.+++. . .
T Consensus 461 ~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~pdlniV~Fr~~~~g~~~--------l~~~n~ln~~i~~~~~~~~g~~~~ 532 (608)
T TIGR03811 461 SIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKPDFNMVDYVFNEKGNDD--------LVKMNKLNHAFYDYASYVKGSIYN 532 (608)
T ss_pred HHHHHHHHHHHHHhcccccCCCCeeEEecCCCCcceEEEEEecCCCcc--------HHHHHHHHHHHHHhhccccCCCCC
Confidence 99999999999999 677887 89999999999999865321 1247889999999988 2 2
Q ss_pred CcEEEEeceeC--------------------------CeeEEEEeccCCCCCH-HHHHHHHHHHHHHHHHHH
Q psy13453 227 KVIYIVKGSFQ--------------------------DRLFMRFAICSSQTEE-SDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 227 G~~~vs~t~l~--------------------------g~~~LRi~v~np~Tt~-e~i~~~l~~l~~~~~~i~ 271 (764)
-.+++|.|.+. ..++||.|++||..+. +.++.+++.+++..++.+
T Consensus 533 ~~~~~s~t~~~~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~~~~~~~ 604 (608)
T TIGR03811 533 NEFITSHTDFAIPDYGDSPFAFVNSLGFSDEEWQRAGKVTILRASVMTPYMNDKENFDEYAPKIKAAMQEKL 604 (608)
T ss_pred cceEeeecccccchhhhhHHHHHHHcCCChhhhccCCceEEEEEEecCcccCChhhHHHHHHHHHHHHHHHH
Confidence 33566666442 2579999999998654 888888888888776544
No 21
>PLN02263 serine decarboxylase
Probab=100.00 E-value=2.1e-33 Score=315.03 Aligned_cols=224 Identities=15% Similarity=0.119 Sum_probs=182.5
Q ss_pred ccccccc-ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCccccc
Q psy13453 4 RSLIPKL-AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQD 81 (764)
Q Consensus 4 ~~~~~~~-~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~ 81 (764)
|...|.. +|.||+ .|||+.|||++|||+. ++||+|++|+||+++|+++|++++ .+|++ |+|+|||++|+
T Consensus 173 Re~~~~~vvy~S~~---aH~Sv~KAa~llgi~~---~~Vp~d~~g~mD~~aL~~aI~~d~---~~P~iVvataGTT~~GA 243 (470)
T PLN02263 173 REVFPDGILYASRE---SHYSVFKAARMYRMEC---VKVDTLVSGEIDCADFKAKLLANK---DKPAIINVNIGTTVKGA 243 (470)
T ss_pred HhhcCCcEEEEcCC---ccHHHHHHHHhcCCcc---eEeccCCCCcCcHHHHHHHHHhCC---CCcEEEEEEecCCCCcC
Confidence 3445654 899999 8999999999999976 999999999999999999998864 36888 69999999999
Q ss_pred ccCchhhhc-----CC-----Cceecccc-------------------------------cccc-ceeeeecCCCccccc
Q psy13453 82 IQSLNAPVS-----NG-----PLKVGGVL-------------------------------RRVY-SSCLVPRGQKSLRTT 119 (764)
Q Consensus 82 iDpi~~ia~-----~~-----wlHVDa~l-------------------------------~~~y-~s~ll~rd~~~l~~~ 119 (764)
||||++|++ ++ |+||||++ +.++ ||++++|++. + .+
T Consensus 244 iDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~-~-~~ 321 (470)
T PLN02263 244 VDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH-I-NV 321 (470)
T ss_pred CCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCCCcCccEEEECCccccCCCcCEEEEEEehhh-H-hh
Confidence 999999987 54 99999953 2233 5788998643 2 33
Q ss_pred cccccc---cCCcccCCCCcc-cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeec
Q psy13453 120 VLFHFL---FQHWQIPLGRRF-RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKV 195 (764)
Q Consensus 120 ~s~~~d---~~d~tle~SRr~-~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P 195 (764)
++...+ ..++|++|||++ .++|+|++|+++|++||++++++++++|++|++.|+++ +++++.+|.+++|+|+- |
T Consensus 322 ~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f~~-p 399 (470)
T PLN02263 322 LSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVVFER-P 399 (470)
T ss_pred hccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEEec-C
Confidence 444443 357899999986 58999999999999999999999999999999999997 88889999999999972 1
Q ss_pred cccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 196 RFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 196 ~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
. +.+..+|| .....+ ..+|+| ++||.+++.+++|+++|++.....
T Consensus 400 ----------------~--------~~~~~~gW---~L~~~~--~~~Hiv-vmphv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 400 ----------------K--------DEEFVRRW---QLACQG--NIAHVV-VMPSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred ----------------c--------hHHhhcce---EEccCC--CcEEEE-EcCCCCHHHHHHHHHHHHHHHhhh
Confidence 0 11235788 444444 359995 558888999999999999887644
No 22
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=7.1e-32 Score=294.52 Aligned_cols=228 Identities=43% Similarity=0.643 Sum_probs=199.3
Q ss_pred cccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHH
Q psy13453 525 FNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVS 604 (764)
Q Consensus 525 ~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~A 604 (764)
||+++.+++++++++++++...+|++...|..+|..+++|+++++|+++++|++.. ...++||+|||+||+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~-------~~~~~~t~ggt~a~~~a 73 (345)
T cd06450 1 FLAGFVTTMDPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSE-------DADGVFTSGGSESNLLA 73 (345)
T ss_pred CcccccCCCcHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCC-------CCCEEEeCChhHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999721 24799999999999999
Q ss_pred HHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCC
Q psy13453 605 ILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLI 684 (764)
Q Consensus 605 l~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~ 684 (764)
+.+++.+..++.+..+. ...++.+|++++.+|+++.+++..+|.+++.||+++++.+|+++|+++|.++.++|..
T Consensus 74 l~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~ 148 (345)
T cd06450 74 LLAARDRARKRLKAGGG-----RGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLN 148 (345)
T ss_pred HHHHHHHhhhhhhcccc-----cccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCC
Confidence 99998865443221100 0112458999999999999999999999999999988999999999999988888888
Q ss_pred ceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 685 PCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 685 p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+.+|+++.++|.+|.++|+++|+++|++||+|+|+|+||+++.+..+.++....+++.+|++++++|||+++|++||+++
T Consensus 149 ~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~ 228 (345)
T cd06450 149 PIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVL 228 (345)
T ss_pred cEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHH
Confidence 89999999999999999999999999999999999999999887666555545566788999999999999999999864
No 23
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.98 E-value=1.5e-32 Score=310.34 Aligned_cols=250 Identities=20% Similarity=0.228 Sum_probs=200.3
Q ss_pred ccccccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCC-CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCc
Q psy13453 7 IPKLAYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPD-SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSL 85 (764)
Q Consensus 7 ~~~~~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~-~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi 85 (764)
.| -+++|++ .|||+.|||++|||+. +.||+++ +++||+++|+++|++++..| ++|||||||++|+||||
T Consensus 157 ~P-~ii~s~~---aH~s~~Kaa~~lG~~~---~~v~~~~~~~~id~~~l~~~i~~~t~~g---~vV~~aGtT~~G~iDdi 226 (460)
T COG0076 157 KP-NIVCSET---AHFSFEKAARYLGLGL---RRVPTVPTDYRIDVDALEEAIDENTIGG---VVVGTAGTTDTGSIDDI 226 (460)
T ss_pred CC-eEEecCc---chhHHHHHHHHhCCCc---eeEEeccCccccCHHHHHHHHHhhccCc---eEEEEecCCCCCccCCH
Confidence 45 4788999 8999999999999999 6666665 89999999999999999877 56899999999999999
Q ss_pred hhhhc-----CCCceecccc---------------------------cccc------ceeeeecCCCcccccccc--cc-
Q psy13453 86 NAPVS-----NGPLKVGGVL---------------------------RRVY------SSCLVPRGQKSLRTTVLF--HF- 124 (764)
Q Consensus 86 ~~ia~-----~~wlHVDa~l---------------------------~~~y------~s~ll~rd~~~l~~~~s~--~~- 124 (764)
++|++ ++|+||||+. +|+| ||++++||++.+.....+ .+
T Consensus 227 ~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl 306 (460)
T COG0076 227 EELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYL 306 (460)
T ss_pred HHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccC
Confidence 99997 9999999952 3443 579999999665554332 22
Q ss_pred ---ccCCcccCCCC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeecccccc
Q psy13453 125 ---LFQHWQIPLGR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDK 200 (764)
Q Consensus 125 ---d~~d~tle~SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~ 200 (764)
+..++|+.+|| +++++++|++|+++|++||++++++++++|++|+++|++.+.|+++++|.+++||||+.|.. +
T Consensus 307 ~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~~-~- 384 (460)
T COG0076 307 PGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDE-D- 384 (460)
T ss_pred CCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCcc-c-
Confidence 34678999999 44999999999999999999999999999999999999999999999999999999994321 1
Q ss_pred ccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 201 LDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 201 ~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
. .....+..+++|-.+......+|..++..+.+.++..+++.+.++.++.++ +.+...+.+.+.++.+
T Consensus 385 ~---~~~~~~~~~~~gw~v~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 452 (460)
T COG0076 385 T---LADLSERLDRRGWQVPAQLLPKGLAIVFGTHVTGRQGLKFIVANLLITDRE-ESLLALIEEPGREIED 452 (460)
T ss_pred c---hhchHHHHHhcCceeecccCCccceeeeeeEEeeeeeehhhcchhhhhhhh-HHHHHHhhhhhhhhhc
Confidence 0 000011223344556666666677777888888889999999999998888 7777777766655543
No 24
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.97 E-value=3e-31 Score=298.66 Aligned_cols=235 Identities=14% Similarity=0.146 Sum_probs=196.6
Q ss_pred cccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCC-CcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCchh
Q psy13453 10 LAYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDS-EWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLNA 87 (764)
Q Consensus 10 ~~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~-~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~~ 87 (764)
-+|+|++ .||||.|+++++|+.. +.||+|++ ++||+++|+++|+++ |++ ++|+|||++|++|||++
T Consensus 140 ~ii~s~~---~H~sv~ka~~~lg~~v---~~i~~d~~~~~vd~~~L~~~i~~~------t~lV~~t~g~t~tG~idpi~~ 207 (431)
T TIGR01788 140 NLVMGSN---VQVCWEKFARYFDVEL---REVPMDPGRYVIDPEQVVEAVDEN------TIGVVCILGTTYTGEYEDVKA 207 (431)
T ss_pred EEEEcCc---chHHHHHHHHHcCcee---EEEecCCCceeeCHHHHHHHHhhC------CeEEEEEeCCCCCcccCCHHH
Confidence 3899999 8999999999999865 99999975 699999999999875 445 79999999999999999
Q ss_pred hhc-----------CCCceecccc--------------------------------cccc-ceeeeecCCCccccccccc
Q psy13453 88 PVS-----------NGPLKVGGVL--------------------------------RRVY-SSCLVPRGQKSLRTTVLFH 123 (764)
Q Consensus 88 ia~-----------~~wlHVDa~l--------------------------------~~~y-~s~ll~rd~~~l~~~~s~~ 123 (764)
|++ ++|+||||+. +.++ ++.+++|+++.+...++.+
T Consensus 208 I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~ 287 (431)
T TIGR01788 208 LNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFH 287 (431)
T ss_pred HHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCcEEEEEeChHHcchhheec
Confidence 885 4899999931 1233 3678888876555544444
Q ss_pred cc-----cCCcccCCCCcc-cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC-CCceeEEEEeecc
Q psy13453 124 FL-----FQHWQIPLGRRF-RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCP-PSMGLVCFRLKVR 196 (764)
Q Consensus 124 ~d-----~~d~tle~SRr~-~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~-P~l~iV~Fry~P~ 196 (764)
.+ ..++++++||++ +++++|+.|+.+|.+||++++++++++|++|+++|++.|+|+++.+ |.+++||||+.+.
T Consensus 288 ~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~ 367 (431)
T TIGR01788 288 VNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDD 367 (431)
T ss_pred ccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCC
Confidence 32 345799999976 8899999999999999999999999999999999999999999998 8999999999753
Q ss_pred ccccccccccCccCCccHHHHHHHHHHHhcCcEE---EEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 197 FWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIY---IVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 197 ~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~---vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
+ +.+.-+.++.++|.++||++ .+.+.+++..++|+|+ +|+++++++++|+++|+++.+.+
T Consensus 368 ~-------------~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~-~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 368 A-------------DPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVV-REGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred C-------------CCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEe-cCCCCHHHHHHHHHHHHHHHHhh
Confidence 2 11112678999999999975 4555589999999975 88889999999999999988764
No 25
>PLN03032 serine decarboxylase; Provisional
Probab=99.97 E-value=8.6e-30 Score=281.58 Aligned_cols=214 Identities=16% Similarity=0.145 Sum_probs=172.7
Q ss_pred cccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCchhh
Q psy13453 10 LAYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLNAP 88 (764)
Q Consensus 10 ~~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~~i 88 (764)
.+|.|++ .|||+.|||++||++. +.||+|++|+||+++|+++|++++ + .|++ |+|+|||++|+||||++|
T Consensus 113 ~vi~s~~---~H~Sv~kaa~~lg~~~---~~V~~d~~g~id~~~L~~~i~~~~--~-~~~lvv~tagtt~tG~idpi~eI 183 (374)
T PLN03032 113 ILYASRE---SHYSVFKAARMYRMEA---VKVPTLPSGEIDYDDLERALAKNR--D-KPAILNVNIGTTVKGAVDDLDRI 183 (374)
T ss_pred EEEeCCC---ceeHHHHHHHHcCCCC---eEeeeCCCCcCcHHHHHHHHHHcC--C-CCEEEEEEecCcCCccCCCHHHH
Confidence 3899999 8999999999999986 999999999999999999998753 2 4666 799999999999999998
Q ss_pred hc-----C-----CCceecccc-------------------------------cccc-ceeeeecCCCccccccccccc-
Q psy13453 89 VS-----N-----GPLKVGGVL-------------------------------RRVY-SSCLVPRGQKSLRTTVLFHFL- 125 (764)
Q Consensus 89 a~-----~-----~wlHVDa~l-------------------------------~~~y-~s~ll~rd~~~l~~~~s~~~d- 125 (764)
++ + +|+||||+. ..++ |+++++|++. + .++..+.+
T Consensus 184 ~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~-~-~~~~~~~~Y 261 (374)
T PLN03032 184 LRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKKH-V-KALSQNVEY 261 (374)
T ss_pred HHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEchh-h-HhhccCCcc
Confidence 86 3 599999942 1133 3678888643 2 22333333
Q ss_pred --cCCcccCCCC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeecccccccc
Q psy13453 126 --FQHWQIPLGR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLD 202 (764)
Q Consensus 126 --~~d~tle~SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~ 202 (764)
..++|++||| +++++++|++|+++|++||++++++++++|++|++.|++. +++++.+|.+++|+|+-.
T Consensus 262 l~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~V~f~~~-------- 332 (374)
T PLN03032 262 LNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSSTVVFERP-------- 332 (374)
T ss_pred cCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCceEEEEcCC--------
Confidence 4589999999 5789999999999999999999999999999999999985 999999999999999632
Q ss_pred ccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 203 NLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 203 ~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
.+ +. ..+|| .....++ .+|+|+ +||++++.+++|+++|++.
T Consensus 333 ---------~~-------~~-~~~~w---~l~~~~~--~~hi~v-m~~~~~~~id~fi~dl~~~ 373 (374)
T PLN03032 333 ---------MD-------EA-FIKKW---QLACEGD--IAHVVV-MPNVTVEKLDEFVEELVEV 373 (374)
T ss_pred ---------Cc-------Hh-Hhhee---eecccCC--EEEEEE-CCCCCHHHHHHHHHHHhcc
Confidence 10 11 22577 3434443 899964 5888899999999999763
No 26
>PRK02769 histidine decarboxylase; Provisional
Probab=99.95 E-value=1.2e-27 Score=265.90 Aligned_cols=219 Identities=16% Similarity=0.146 Sum_probs=176.2
Q ss_pred ccccc-ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCccccccc
Q psy13453 6 LIPKL-AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQ 83 (764)
Q Consensus 6 ~~~~~-~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iD 83 (764)
+.|.. +|.|++ .|||+.||+++||++. +.||++++|+||+++|+++|+++ |+.|++ |+|+|||++|++|
T Consensus 107 ~~~~~~ii~s~~---~H~Sv~ka~~~lg~~~---~~V~~~~~g~id~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~id 177 (380)
T PRK02769 107 LFPDGTLYYSKD---THYSVSKIARLLRIKS---RVITSLPNGEIDYDDLISKIKEN---KNQPPIIFANIGTTMTGAID 177 (380)
T ss_pred hCCCcEEEeCCC---ceehHHHHHHHcCCCC---ceeccCCCCcCcHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccC
Confidence 34554 899999 8999999999999987 89999999999999999999986 556777 7999999999999
Q ss_pred Cchhhhc-----C---CCceecccc-------------------------------cccc-ceeeeecCCCccccccccc
Q psy13453 84 SLNAPVS-----N---GPLKVGGVL-------------------------------RRVY-SSCLVPRGQKSLRTTVLFH 123 (764)
Q Consensus 84 pi~~ia~-----~---~wlHVDa~l-------------------------------~~~y-~s~ll~rd~~~l~~~~s~~ 123 (764)
||++|++ + +|+||||+. ..++ ++++++|++. +. .+...
T Consensus 178 pi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~~-~~-~~~~~ 255 (380)
T PRK02769 178 NIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKKY-VE-RISVD 255 (380)
T ss_pred CHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCCcEEEEEehhh-hh-hcccC
Confidence 9999986 4 699999952 1123 3567777643 22 12222
Q ss_pred cc---cCCcccCCCC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccc
Q psy13453 124 FL---FQHWQIPLGR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWD 199 (764)
Q Consensus 124 ~d---~~d~tle~SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~ 199 (764)
.+ ..++|++||| +++++++|++|+++|++||++++++++++|+++.++|++ .+++++.+|.+++|||+..
T Consensus 256 ~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~-~g~~~~~~p~~~~v~f~~~----- 329 (380)
T PRK02769 256 VDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQA-NGIPAWRNPNSITVVFPCP----- 329 (380)
T ss_pred ccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-CCCEEEcCCCceEEEEcCC-----
Confidence 22 3678999999 678999999999999999999999999999999999988 5999999999999999632
Q ss_pred cccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 200 KLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 200 ~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
. .++ . +|| .....++ .+|+| ++||++++++++|++++.+.-.
T Consensus 330 ------------~----~~~----~-~~w---~l~~~~~--~~hi~-~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 330 ------------S----ERI----W-KKW---HLATSGN--QAHII-TMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred ------------C----HHH----H-hCe---eEcccCC--EEEEE-ECCCCCHHHHHHHHHHHHHHHh
Confidence 1 112 1 577 4444443 89995 6788889999999999987653
No 27
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.93 E-value=4.3e-25 Score=240.07 Aligned_cols=207 Identities=22% Similarity=0.197 Sum_probs=173.3
Q ss_pred CccccccCCCCChHHHHHHHH---HHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHH
Q psy13453 523 PQFNAYFPTGSSYPSIVGDML---SGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASE 599 (764)
Q Consensus 523 P~~~~~~~~~~~~~~~lad~l---~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTe 599 (764)
+-|++|-.+.+..+.++..++ ...+.++...+..+..+..+-+++.+++++++|.++ ...+|||||||
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~---------~eIiFTSG~TE 72 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADP---------EEIIFTSGATE 72 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCC---------CeEEEecCCcH
Confidence 568999888888777655444 334444445788888999999999999999999987 37899999999
Q ss_pred HHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhC---CCceEEEecCCCCcccHHHHHHHHH
Q psy13453 600 ATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIG---DVPVRQLRSDDNGVLRGDALLTAVK 676 (764)
Q Consensus 600 ANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~l---Gl~v~~Vp~d~~g~md~~~Le~~I~ 676 (764)
||.+|++.+......+. .+-.|++|..+|.|+...++++ |+.|.++|+|++|++|+++|+++|+
T Consensus 73 snNlaI~g~~~a~~~~~-------------~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~ 139 (386)
T COG1104 73 SNNLAIKGAALAYRNAQ-------------KGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALR 139 (386)
T ss_pred HHHHHHHhhHHhhhccc-------------CCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcC
Confidence 99999997544332211 1225999999999999999998 9999999999999999999999998
Q ss_pred HhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC
Q psy13453 677 EDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 677 ~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~ 756 (764)
++ +++|.+.+.++++|+++||+||+++|++++++|||||+++.+-+..+-.. + .+|.++++.||+. .
T Consensus 140 ~~------T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~-----~-~vD~ls~SaHK~~-G 206 (386)
T COG1104 140 PD------TILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEE-----L-GVDLLSFSAHKFG-G 206 (386)
T ss_pred CC------ceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceeccccc-----c-CcceEEeehhhcc-C
Confidence 77 56999999999999999999999999999999999999999877765322 1 2699999999955 5
Q ss_pred CcCceeeC
Q psy13453 757 NFDCSAMW 764 (764)
Q Consensus 757 P~~~g~l~ 764 (764)
|.|+|+||
T Consensus 207 pkGiGaLy 214 (386)
T COG1104 207 PKGIGALY 214 (386)
T ss_pred CCceEEEE
Confidence 99999987
No 28
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.92 E-value=7.2e-22 Score=239.67 Aligned_cols=175 Identities=17% Similarity=0.178 Sum_probs=141.6
Q ss_pred chHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEec
Q psy13453 558 PACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTS 637 (764)
Q Consensus 558 p~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S 637 (764)
....+++.+..+|+++++|++. ......||+++|+.+++++|.....+ +..++.+|++|
T Consensus 538 qG~l~~i~e~q~~l~eltG~d~----------~sl~~~~ga~ge~agL~a~r~~~~~~-----------G~~~r~~vlis 596 (954)
T PRK05367 538 AGYRELIDQLEAWLAEITGYDA----------VSLQPNAGAQGEYAGLLAIRAYHESR-----------GEGHRDVCLIP 596 (954)
T ss_pred HHHHHHHHHHHHHHHHHHCCCC----------EEECccHHHHHHHHHHHHHHHHhhcc-----------CCCCCCEEEEE
Confidence 3488999999999999999974 23334578899999998887643221 11124579999
Q ss_pred CCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEE
Q psy13453 638 DQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWL 717 (764)
Q Consensus 638 ~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwL 717 (764)
+.+|.|+.+++..+|++++.||+|++|++|+++|+++|++. +..+++|++|.+||..+..|||++|+++|+++|+|+
T Consensus 597 ~~aH~snp~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~~~---~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v 673 (954)
T PRK05367 597 SSAHGTNPASAVMAGMKVVVVACDENGNIDLDDLRAKAEEH---ADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQV 673 (954)
T ss_pred chhhhhhHHHHHHCCCEEEEECCCCCCCcCHHHHHHHHhcc---CCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEE
Confidence 99999999999999999999999999999999999999753 235889999999998444599999999999999999
Q ss_pred EEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCce
Q psy13453 718 HVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCS 761 (764)
Q Consensus 718 HVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g 761 (764)
|||||++++.+.... .|--.||++++|+|||+++|+|+|
T Consensus 674 ~VDgA~~~al~~l~~-----pg~~GADi~~~s~HK~f~~P~G~G 712 (954)
T PRK05367 674 YLDGANMNAQVGLAR-----PGDIGADVSHLNLHKTFCIPHGGG 712 (954)
T ss_pred EEECcChhhccCCCC-----hhhcCCCEEEecCcccCCCCcCCC
Confidence 999999765443321 122357999999999999999977
No 29
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.91 E-value=3e-23 Score=228.76 Aligned_cols=229 Identities=21% Similarity=0.224 Sum_probs=176.8
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCc
Q psy13453 500 EDWRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPE 579 (764)
Q Consensus 500 ~~~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~ 579 (764)
.+.+++|+.+++.-.++.. .. |||+...+.+. +.++ +.+...+..+.......+....++.++.+++++++|.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~-~~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~ 76 (371)
T PRK13520 2 LSEEEILEELEEYRSEDLK-YE--RILSSMCTEPH-PIAR-KAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPD 76 (371)
T ss_pred CCHHHHHHHHHHHHhcCCC-HH--HeeeeeecCch-HHHH-HHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCC
Confidence 4568999999998777654 33 58888765544 3333 444444444333333336678889999999999999876
Q ss_pred cccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEe
Q psy13453 580 EFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLR 659 (764)
Q Consensus 580 ~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp 659 (764)
..++||+|||++|+.++.+++..... ++..|++++.+|+++.++++..|++++.||
T Consensus 77 ---------~~~~~~~ggt~a~~~a~~~~~~~~~~---------------~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~ 132 (371)
T PRK13520 77 ---------AYGYITSGGTEANIQAVRAARNLAKA---------------EKPNIVVPESAHFSFDKAADMLGVELRRAP 132 (371)
T ss_pred ---------CCeEEecCcHHHHHHHHHHHHhhccC---------------CCceEEecCcchHHHHHHHHHcCceEEEec
Confidence 35799999999999999888754210 123688999999999999999999999999
Q ss_pred cCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhh--hhh
Q psy13453 660 SDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYA--HLK 737 (764)
Q Consensus 660 ~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r--~~l 737 (764)
+++++.+|+++|+++|.++ +.+|+++.++|.+|.++|+++|+++|++||+|+|||+||+++.+...+.. ..+
T Consensus 133 ~~~~~~~d~~~l~~~i~~~------~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~ 206 (371)
T PRK13520 133 LDDDYRVDVKAVEDLIDDN------TIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDF 206 (371)
T ss_pred CCCCCcCCHHHHHHHHhhC------CEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccc
Confidence 9988999999999999754 45777888999999999999999999999999999999998754321110 111
Q ss_pred cCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 738 RGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 738 ~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
....+|++++++|||+++|.++|.++
T Consensus 207 -~~~~vd~~~~s~~K~~~a~~~~G~~~ 232 (371)
T PRK13520 207 -SLPGVDSITIDPHKMGLAPIPAGGIL 232 (371)
T ss_pred -cCCCCceEEECCccccCccCCceEEE
Confidence 12356999999999999999998764
No 30
>KOG1383|consensus
Probab=99.91 E-value=2.2e-23 Score=226.53 Aligned_cols=239 Identities=18% Similarity=0.186 Sum_probs=195.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHHHHHHHHhhcc-cCccccCCchHHHHHHHHHHHH
Q psy13453 493 GEMPEEGEDWRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIVGDMLSGAFGL-IGFSWLSSPACTELEVLVMNWL 571 (764)
Q Consensus 493 ~~lP~~g~~~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~-n~~~~~~sp~~t~lE~~v~~~l 571 (764)
..+|++|.+-+++++.+.+..+.+...+..+.-+.-....+....+ ++..+|- |...-+..|..+.+|.++++++
T Consensus 54 ~~lP~~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~~~~~~~~~l----~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm~ 129 (491)
T KOG1383|consen 54 FTLPSKGLPKDAVLELINDELMLDGNPRLGLASGVVYWGEPELDKL----IMEAYNKFNPLHPDEFPVVRKLEAECVNMI 129 (491)
T ss_pred ecCCCCCCCHHHHHHHHHHHhccCCCcccCeeeEEEecCCcchhhH----HHHHHhhcCccCccccchhHHHHHHHHHHH
Confidence 5789999999999999999887766533333222222223333334 4444444 6777889999999999999999
Q ss_pred HHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhC
Q psy13453 572 GKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIG 651 (764)
Q Consensus 572 a~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~l 651 (764)
+.||+.+++ ..|..|+|||||.+.+.+..|++.....+ ..++.|+++...|.+++|+++++
T Consensus 130 ~~L~~~~~~--------~~g~~t~G~Ses~l~~~k~~~~~r~~~k~-----------I~~p~iv~~~~v~~a~eK~a~yf 190 (491)
T KOG1383|consen 130 ANLFNAPSD--------SCGCGTVGGSESGLAAKKSYRNRRKAQKG-----------IDKPNIVTPQNVHAAFEKAARYF 190 (491)
T ss_pred HHHhcCCcc--------ccCccccccchHHHHHHHHHHHHHHhccC-----------CCCccccchHHHHHHHHHHHhhE
Confidence 999999864 67899999999988888888877654311 22456889999999999999999
Q ss_pred CCceEEEecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh-cCCEEEEeccccccccc
Q psy13453 652 DVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE-YNIWLHVDAAYAGSALL 729 (764)
Q Consensus 652 Gl~v~~Vp~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~-~glwLHVDaA~Gg~~l~ 729 (764)
++.++.||++ .+++||+..+.+.|.++ +++|++++|++.+|.+||+++|+++.-+ |++.+|||+|-||+..+
T Consensus 191 ~v~l~~V~~~~~~~~~D~~k~~~~i~eN------ti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p 264 (491)
T KOG1383|consen 191 EVELREVPLDEGDYRVDPGKVVRMIDEN------TIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINP 264 (491)
T ss_pred EEEEEeeeccccceEecHHHHHHHhccc------eEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCcccccc
Confidence 9999999999 78999999999999887 5699999999999999999999999988 99999999999998874
Q ss_pred c-----chhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 730 L-----PEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 730 ~-----~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
. .++.++..|+ -||+.|.||++++|.|.|++
T Consensus 265 ~~~~~~~~fdFr~p~V---~Sisa~~HKYGl~~~G~~~v 300 (491)
T KOG1383|consen 265 AGYLNEEEFDFRVPGV---TSISADGHKYGLAPAGSSWV 300 (491)
T ss_pred ccccCccccccCCCCc---eeEeeccceeeeeecCcEEE
Confidence 1 2445555555 99999999999999999975
No 31
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.90 E-value=3.6e-22 Score=220.58 Aligned_cols=230 Identities=20% Similarity=0.204 Sum_probs=173.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccc
Q psy13453 502 WRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEF 581 (764)
Q Consensus 502 ~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~ 581 (764)
-+++++++.+ ++.+....+++|++.++.+.+..... +.+..++..+.......|....++.++.+++++++|.++
T Consensus 2 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~-- 76 (373)
T TIGR03812 2 EEEVLEELKE-YRSEDLKYSDGRILGSMCTNPHPIAV--KAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPD-- 76 (373)
T ss_pred HHHHHHHHHH-HHhcCCCCCCCcEEEEEeCCchHHHH--HHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCC--
Confidence 4789999999 45666668899998888776554422 222333332222222345678899999999999999976
Q ss_pred cCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecC
Q psy13453 582 LNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSD 661 (764)
Q Consensus 582 ~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d 661 (764)
..+++++|||++|+.++.+++...... .+...|++++.+|+++.++++..|++++.+|++
T Consensus 77 -------~~~~~~~g~~~~~~~~~~~~~~~~~~~-------------~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~ 136 (373)
T TIGR03812 77 -------AYGYIVSGGTEANIQAVRAAKNLAREE-------------KRTPNIIVPESAHFSFEKAAEMLGLELRYAPLD 136 (373)
T ss_pred -------CCeEEeccHHHHHHHHHHHHHHHHhcc-------------CCCcEEEECCcchHHHHHHHHHcCCeEEEEeeC
Confidence 357899999999999887766432111 012358889999999999999999999999999
Q ss_pred CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchh-----hhh
Q psy13453 662 DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEY-----AHL 736 (764)
Q Consensus 662 ~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~-----r~~ 736 (764)
.++.+|+++|++++++. +..|+.+.++|.+|.++|+++|+++|+++|+|+|||+||+++.+..... ...
T Consensus 137 ~~~~~d~~~l~~~l~~~------~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d 210 (373)
T TIGR03812 137 EDYTVDVKDVEDLIDDN------TIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFD 210 (373)
T ss_pred CCCCcCHHHHHHHHhhC------cEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCcc
Confidence 89999999999999764 2355656689999999999999999999999999999999865432110 111
Q ss_pred hcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 737 KRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 737 l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+. ...+|++++|+|||+..|.++|.+
T Consensus 211 ~~-~~~~d~~~~s~~K~~~~~~~~G~~ 236 (373)
T TIGR03812 211 FS-LPGVQSITIDPHKMGLSPIPAGGI 236 (373)
T ss_pred cc-CCCCCEEEECccccCCCcCCceEE
Confidence 11 124599999999999999999865
No 32
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.87 E-value=3.7e-21 Score=216.56 Aligned_cols=230 Identities=18% Similarity=0.173 Sum_probs=170.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHcCCCCCCCC-----------------CccccccCC---CCChHHHHHHHHHHhhcccCc
Q psy13453 493 GEMPEEGEDWRHIMRDMNTVIMPGITHWQS-----------------PQFNAYFPT---GSSYPSIVGDMLSGAFGLIGF 552 (764)
Q Consensus 493 ~~lP~~g~~~~~il~~l~~~i~~~~~~~~~-----------------P~~~~~~~~---~~~~~~~lad~l~~~lN~n~~ 552 (764)
..+|++|.+.+.|...+.+.-..+.++|.+ -|+|++..+ +.+..+ ..-
T Consensus 28 ~~~p~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~gere~rv~~~~~~~~~~~~~hgigr~~~l~~------------~q~ 95 (444)
T TIGR03531 28 RKIPEEGWDDETIELFLHELSVMDTNNFPNNVGVGEREGRVFSKLVARRHYRFCHGIGRSGDLVA------------PQP 95 (444)
T ss_pred CcCCccCCCHHHHHHHHHHHhcCCcCCCccccCcCcccceeechhhhhcccceecCCCCcccccc------------cCc
Confidence 468999999999988888875556666651 133333333 211110 011
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChH-HHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTAS-EATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgT-eANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
....|+....++++...|+++++|.++. ..+++++||| +++++++.++|.+.. ..+
T Consensus 96 ka~gss~~~~l~~~~e~~~~~~~G~~~~--------~~a~~v~~~Tg~al~laL~alr~~~~---------------~gd 152 (444)
T TIGR03531 96 KAAGSSLLYKLTNKLVKDFLKLLGLRSI--------KSAFVVPLATGMSLSLCLSALRHKRP---------------KAK 152 (444)
T ss_pred cccCccHHHHHHHHHHHHHHHHcCCCCC--------CEEEEECCHHHHHHHHHHHHcCCcCC---------------CCC
Confidence 1224566788999999999999999742 2478999999 789888887664210 013
Q ss_pred eEEEecCCcchhHHHHHHhCCCceEEEec---CCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHH
Q psy13453 632 LVAYTSDQSNSSVEKSAIIGDVPVRQLRS---DDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGP 708 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~---d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~ 708 (764)
.+| ++..+|+|+.||+.++|++++.|++ ++++.||+++|+++|++.. ...+++|+.|.+|+..|..|||++|++
T Consensus 153 ~VI-~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~--~kai~~Vv~Tp~t~~~g~~ddL~eIa~ 229 (444)
T TIGR03531 153 YVI-WPRIDQKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIG--PDNILCVLSTTSCFAPRSPDDIEEIAK 229 (444)
T ss_pred EEE-EECcChHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhcc--CCCEEEEEEcCCcCCCcchhCHHHHHH
Confidence 344 5556799999999999999999995 4678999999999998532 134667777777777889999999999
Q ss_pred HHHhcCCEEEEeccccccccccchhhhhh-cCCC--cccEEEEcCCccCCCCcCceee
Q psy13453 709 ICQEYNIWLHVDAAYAGSALLLPEYAHLK-RGLE--YVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 709 i~~~~glwLHVDaA~Gg~~l~~~~~r~~l-~gie--~aDSit~d~HK~l~~P~~~g~l 763 (764)
+|++||+|+|||+|||.. ++.+.+.+ +|++ ++|++++|+||++.+|.++|++
T Consensus 230 la~k~gI~lIvDaAyg~~---~~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I 284 (444)
T TIGR03531 230 ICANYDIPHIVNNAYGLQ---SNKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAII 284 (444)
T ss_pred HHHHcCCEEEEECcCcCc---ChhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEE
Confidence 999999999999999963 33334443 3443 6899999999999999998876
No 33
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.85 E-value=4.6e-20 Score=201.47 Aligned_cols=236 Identities=23% Similarity=0.253 Sum_probs=179.5
Q ss_pred cccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCchhh
Q psy13453 10 LAYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLNAP 88 (764)
Q Consensus 10 ~~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~~i 88 (764)
.+++++. .|||+.|++.++|... +.||+++++++|+++|+++|++..++|..|.+ +.+.+++++|.+||++++
T Consensus 97 ~v~~~~~---~h~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i 170 (345)
T cd06450 97 VIVCSDQ---AHVSVEKAAAYLDVKV---RLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEI 170 (345)
T ss_pred EEEEcCc---chhHHHHHHHHHhcCe---EEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHH
Confidence 4777887 8999999999999877 99999988999999999999987777777766 699999999999999998
Q ss_pred hc-----CCCceeccccccccceeeeecCC-CccccccccccccCCcccCCCCccc-----HHHHHHHHHHccHHHHHHH
Q psy13453 89 VS-----NGPLKVGGVLRRVYSSCLVPRGQ-KSLRTTVLFHFLFQHWQIPLGRRFR-----ALKLWMTLRSYGLKGLQAY 157 (764)
Q Consensus 89 a~-----~~wlHVDa~l~~~y~s~ll~rd~-~~l~~~~s~~~d~~d~tle~SRr~~-----ALklWatL~~lG~eGy~~~ 157 (764)
++ ++|+|+|++...........+.. ..+...-+...+.. ..+.+..+.. ++++|++++++|.+||.++
T Consensus 171 ~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~-K~l~~p~g~g~~~~~~~~~~~~l~~l~~~g~~~~ 249 (345)
T cd06450 171 ADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPH-KYGLVPLGCSAVLVRALKLWATLRRFGRDGYGEH 249 (345)
T ss_pred HHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchh-HhhCCCcchHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 86 89999999742211000000000 00000000011111 1121211111 7889999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeC
Q psy13453 158 LRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQ 237 (764)
Q Consensus 158 i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~ 237 (764)
+++..++++++.+.|++.++++++.+|+.++++|++.+.. +.+..+.++.++|.++|.+++....+.
T Consensus 250 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~-------------~~~~~~~~i~~~L~~~g~~~~~~~~~~ 316 (345)
T cd06450 250 IDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSV-------------KLDELNYDLSDRLNERGGWHVPATTLG 316 (345)
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcc-------------hhhHHHHHHHHHHHhcCCEEEEeeEEC
Confidence 9999999999999999999999999999999999975310 112345689999999987777766666
Q ss_pred CeeEEEEeccCCCCCHHHHHHHHHHHHH
Q psy13453 238 DRLFMRFAICSSQTEESDVQLGWNEIRT 265 (764)
Q Consensus 238 g~~~LRi~v~np~Tt~e~i~~~l~~l~~ 265 (764)
+..++|+++++++|++++++.+++.|++
T Consensus 317 ~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 317 GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 7789999999999999999999999875
No 34
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.84 E-value=5e-20 Score=206.18 Aligned_cols=203 Identities=19% Similarity=0.172 Sum_probs=161.7
Q ss_pred ccccccCCCCChHHHHHHHHHHh-----hcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChH
Q psy13453 524 QFNAYFPTGSSYPSIVGDMLSGA-----FGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTAS 598 (764)
Q Consensus 524 ~~~~~~~~~~~~~~~lad~l~~~-----lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgT 598 (764)
.||++..++. .+..+.+.+..+ -|.+...+..+..++..++++++.+++++|.++. ...+||+|.|
T Consensus 24 vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~--------~eIvft~~tT 94 (405)
T COG0520 24 VYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSS--------DEIVFTRGTT 94 (405)
T ss_pred EEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCC--------CeEEEeCChh
Confidence 6888876666 344444445543 2444567778888999999999999999999752 4689999999
Q ss_pred HHHHHHHH-HHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH----HHHHhCCCceEEEecCCCCcccHHHHHH
Q psy13453 599 EATLVSIL-VAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE----KSAIIGDVPVRQLRSDDNGVLRGDALLT 673 (764)
Q Consensus 599 eANl~Al~-aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~----kAa~~lGl~v~~Vp~d~~g~md~~~Le~ 673 (764)
++..+... .++. . .++..|++|+.+|.|+. ..++..|+.++.||++++|.++.+++++
T Consensus 95 ~aln~va~~l~~~-~----------------~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~ 157 (405)
T COG0520 95 EALNLVARGLGRS-L----------------KPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEK 157 (405)
T ss_pred HHHHHHHHHhhhh-h----------------cCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHH
Confidence 99544333 2222 1 11246899999998864 4455579999999999999999999999
Q ss_pred HHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCcc
Q psy13453 674 AVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKW 753 (764)
Q Consensus 674 ~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~ 753 (764)
.|.+.++ +|++|..++.+|.+.|+++|+++|+++|+|+.|||||+.+.+..+- +.+ .||.+.+++|||
T Consensus 158 ~i~~~Tk------lvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv-----~~l-~~Df~afsgHKw 225 (405)
T COG0520 158 LITPKTK------LVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDV-----QEL-GCDFLAFSGHKW 225 (405)
T ss_pred hcCCCce------EEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCc-----hhc-CCCEEEEccccc
Confidence 8777544 9999999999999999999999999999999999999998766642 222 579999999999
Q ss_pred CCCCcCceeeC
Q psy13453 754 LLVNFDCSAMW 764 (764)
Q Consensus 754 l~~P~~~g~l~ 764 (764)
|+.|.|+|+||
T Consensus 226 l~gP~GiGvLy 236 (405)
T COG0520 226 LLGPTGIGVLY 236 (405)
T ss_pred ccCCCceEEEE
Confidence 99999999997
No 35
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.84 E-value=1.5e-19 Score=216.29 Aligned_cols=229 Identities=12% Similarity=0.145 Sum_probs=176.9
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHHHHHHHHhhcccCccccCCch-----HHHHHHHHHHHHHHH
Q psy13453 500 EDWRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPA-----CTELEVLVMNWLGKA 574 (764)
Q Consensus 500 ~~~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~-----~t~lE~~v~~~la~l 574 (764)
.+--+++..+++.-..+.. ..| .|++-=.+ ......+.+++...++.....+...|. ..+++.+...||+++
T Consensus 466 ~sE~e~~r~~~~L~~kn~~-~~~-~fi~lGsc-tmk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~el 542 (939)
T TIGR00461 466 HSETEMLRYLHRLESKDLA-LNN-SMIPLGSC-TMKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSI 542 (939)
T ss_pred CCHHHHHHHHHHHHhcCCC-ccc-cCCCCccC-CCccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHH
Confidence 3557788887776444432 122 23332222 233455667776667666556666666 889999999999999
Q ss_pred cCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCc
Q psy13453 575 LGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVP 654 (764)
Q Consensus 575 lG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~ 654 (764)
+|++. .++..+||+++++++++++|.....+ . ..++.+|++|+.+|.++.+++...|++
T Consensus 543 tGmd~----------~Sl~p~aGA~gE~agL~aiR~y~~~r--g---------e~~R~~vlip~saHgtnPasa~~~G~~ 601 (939)
T TIGR00461 543 TGFDA----------ISLQPNSGAQGEYAGLRVIRSYHESR--G---------ENHRNICLIPVSAHGTNPASAAMAGMQ 601 (939)
T ss_pred HCCCC----------cccCCchHHHHHHHHHHHHHHHHHhc--C---------CCCCCEEEEEccccCcCHHHHHHCCCE
Confidence 99985 47888999999999999998754211 1 123568999999999999999999999
Q ss_pred eEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc-HHHHHHHHHhcCCEEEEeccccccccccchh
Q psy13453 655 VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN-LEELGPICQEYNIWLHVDAAYAGSALLLPEY 733 (764)
Q Consensus 655 v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp-l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~ 733 (764)
++.||+|++|++|+++|+++|++ .|..+.+|++|.+|| +|.++| |++|+++|+++|.|+|||||+..+......
T Consensus 602 Vv~V~~d~~G~iDle~L~~~i~~---~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~- 676 (939)
T TIGR00461 602 VVPVNCDQDGNIDLVDLKNKAEQ---HGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTS- 676 (939)
T ss_pred EEEeccCCCCCcCHHHHHHHHhh---cCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCC-
Confidence 99999999999999999999976 344588999999999 799977 999999999999999999999664333221
Q ss_pred hhhhcCCCcccEEEEcCCccCCCCcCce
Q psy13453 734 AHLKRGLEYVDSFDFNTHKWLLVNFDCS 761 (764)
Q Consensus 734 r~~l~gie~aDSit~d~HK~l~~P~~~g 761 (764)
.|--.||.+.+|.||+|+.|.++|
T Consensus 677 ----Pg~~GaDi~~~s~HKtf~~P~G~G 700 (939)
T TIGR00461 677 ----PGDLGADVCHLNLHKTFCIPHGGG 700 (939)
T ss_pred ----ccccCCCEEEecCCccCCCCCCCC
Confidence 133467999999999999999883
No 36
>PLN02651 cysteine desulfurase
Probab=99.83 E-value=1.1e-19 Score=201.07 Aligned_cols=203 Identities=19% Similarity=0.175 Sum_probs=155.9
Q ss_pred cccccCCCCChHHHHHHHHHHhhc----ccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHH
Q psy13453 525 FNAYFPTGSSYPSIVGDMLSGAFG----LIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEA 600 (764)
Q Consensus 525 ~~~~~~~~~~~~~~lad~l~~~lN----~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeA 600 (764)
||++-.+++.+..++..+.....+ .....+..++.+..+.+++.+.+++++|.++ ...+||+|+|++
T Consensus 2 Yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~---------~~v~~t~~~t~a 72 (364)
T PLN02651 2 YLDMQATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADP---------KEIIFTSGATES 72 (364)
T ss_pred cccCcCCCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCC---------CeEEEeCCHHHH
Confidence 677776666666554443332211 1111233456677888889999999999865 368999999999
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHH---hCCCceEEEecCCCCcccHHHHHHHHHH
Q psy13453 601 TLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAI---IGDVPVRQLRSDDNGVLRGDALLTAVKE 677 (764)
Q Consensus 601 Nl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~---~lGl~v~~Vp~d~~g~md~~~Le~~I~~ 677 (764)
+.+++..++....+ ++..|+++..+|.|+.+++. ..|+.++.||++++|.+|+++|+++|++
T Consensus 73 ~~~~l~~~~~~~~~---------------~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~ 137 (364)
T PLN02651 73 NNLAIKGVMHFYKD---------------KKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIRP 137 (364)
T ss_pred HHHHHHHHHHhccC---------------CCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCC
Confidence 99998876543221 12358889999999876654 3588999999998899999999999965
Q ss_pred hhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 678 DLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 678 ~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+ +.+|+.+..++.+|.++|+++|+++|+++|+|+|||||++.+.+..+ ++.+ .+|++++++||| +.|
T Consensus 138 ~------t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~-----~~~~-~~D~~~~s~hK~-~gp 204 (364)
T PLN02651 138 D------TALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVD-----VDDL-GVDLMSISGHKI-YGP 204 (364)
T ss_pred C------cEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccC-----cccC-CCCEEEechhhh-CCC
Confidence 4 34888999999999999999999999999999999999998766553 2222 369999999998 679
Q ss_pred cCceeeC
Q psy13453 758 FDCSAMW 764 (764)
Q Consensus 758 ~~~g~l~ 764 (764)
.|+|++|
T Consensus 205 ~G~g~l~ 211 (364)
T PLN02651 205 KGVGALY 211 (364)
T ss_pred CceEEEE
Confidence 9999986
No 37
>KOG1549|consensus
Probab=99.82 E-value=8.8e-20 Score=199.45 Aligned_cols=208 Identities=18% Similarity=0.154 Sum_probs=163.6
Q ss_pred CCCCCccccccCCCCChHHHHHHHHH---Hhh-cccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEe
Q psy13453 519 HWQSPQFNAYFPTGSSYPSIVGDMLS---GAF-GLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQ 594 (764)
Q Consensus 519 ~~~~P~~~~~~~~~~~~~~~lad~l~---~~l-N~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfT 594 (764)
+-..|-|+++-.+++..+.++..++. .++ |++.. ..+..+..--+.+++.+|+|+|.++. +.+||
T Consensus 40 ~~~~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~--~y~w~~~~~~E~aR~~VAklInAd~~---------dIiFt 108 (428)
T KOG1549|consen 40 HGTRPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSR--SYGWKAEDAVEAAREQVAKLINADPS---------DIVFT 108 (428)
T ss_pred CCCccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCcc--ccchhhhHHHHHHHHHHHHHhCCCCC---------cEEEe
Confidence 45678999999999988877654443 333 33322 22333343345689999999999874 59999
Q ss_pred CChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhC---CCceEEEecCCCCcccHHHH
Q psy13453 595 STASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIG---DVPVRQLRSDDNGVLRGDAL 671 (764)
Q Consensus 595 sGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~l---Gl~v~~Vp~d~~g~md~~~L 671 (764)
+|+||||.+++..--... .. + . +-.|++...+|.|+.++++.+ |+.++.||++.+|-.|++.|
T Consensus 109 s~ATEs~Nlvl~~v~~~~-~~-~-----------~-~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~ 174 (428)
T KOG1549|consen 109 SGATESNNLVLKGVARFF-GD-K-----------T-KKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKL 174 (428)
T ss_pred CCchHHHHHHHHHhhccc-cc-c-----------c-cceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHH
Confidence 999999988776321111 11 0 0 116899999999999998874 88999999999999999999
Q ss_pred HHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCC
Q psy13453 672 LTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTH 751 (764)
Q Consensus 672 e~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~H 751 (764)
++.|+.++ -+|.+.+-++..|...|++||..+|+++|+.+|+||||+.+....+ ++.+ .+|.++++.|
T Consensus 175 ~~~i~~~T------~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vD-----V~el-n~D~~s~s~H 242 (428)
T KOG1549|consen 175 REAIRSKT------RLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVD-----VQEL-NADFLSISAH 242 (428)
T ss_pred HHhcCCCc------eEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCcccc-----HHHc-Cchheeeecc
Confidence 99999864 4999999999999999999999999999999999999999866554 3334 5799999999
Q ss_pred ccCCCCcCceeeC
Q psy13453 752 KWLLVNFDCSAMW 764 (764)
Q Consensus 752 K~l~~P~~~g~l~ 764 (764)
||++.|- +|+||
T Consensus 243 K~ygp~~-iGaLY 254 (428)
T KOG1549|consen 243 KIYGPPG-IGALY 254 (428)
T ss_pred cccCCCc-ceEEE
Confidence 9999665 99997
No 38
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.79 E-value=7.9e-18 Score=193.20 Aligned_cols=240 Identities=19% Similarity=0.187 Sum_probs=170.5
Q ss_pred hhhHhhcCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCccccccCCCCC-hHHHHHHHHHH-hhcccCccc---cCCc
Q psy13453 484 PGYLASLVPGEMPEEGEDWRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSS-YPSIVGDMLSG-AFGLIGFSW---LSSP 558 (764)
Q Consensus 484 p~~l~~~l~~~lP~~g~~~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~-~~~~lad~l~~-~lN~n~~~~---~~sp 558 (764)
|..++..-+..+|+ .+-.++++++.+.-..+.. .. ..|.+.-.+... ++.+...++.. .+ .+...| ..+.
T Consensus 35 p~~~~~~~~~~~~~--~se~~~~~~~~~l~~~n~~-~~-~~~~g~G~~~~~~~p~i~~~~~~~~~~-~~~tpYq~e~~sq 109 (481)
T PRK04366 35 PEELLRKEPPELPE--VSELEVVRHYTRLSQKNYG-VD-TGFYPLGSCTMKYNPKINEKVARLPGF-AELHPLQPEETVQ 109 (481)
T ss_pred CHHHhcCCCCCCCC--CCHHHHHHHHHHHHhcCCC-CC-cceecCcccCCCCCHHHHHHHHhCcch-hcCCCCCChhhhh
Confidence 34443222345676 8889999999987554432 11 255555433333 33444444443 13 344445 3566
Q ss_pred hHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecC
Q psy13453 559 ACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSD 638 (764)
Q Consensus 559 ~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~ 638 (764)
...++..++.+|+++++|++. ..++.++|+.++++++.++|...... +..++..|++++
T Consensus 110 G~lel~~~~~~~la~l~G~~~----------~~l~~~~GA~a~~~~l~~~r~~~~~~-----------Gd~~~~~Vlv~~ 168 (481)
T PRK04366 110 GALELMYELQEWLKEITGMDA----------VTLQPAAGAHGELTGLLMIRAYHEAR-----------GDTKRTEVIVPD 168 (481)
T ss_pred HHHHHHHHHHHHHHHHhCCCc----------eEEEeCcHHHHHHHHHHHHHHHhhcc-----------CcCCCCEEEEcC
Confidence 778999999999999999974 35666778888888777665432211 111234688899
Q ss_pred CcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc-ccHHHHHHHHHhcCCEE
Q psy13453 639 QSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF-DNLEELGPICQEYNIWL 717 (764)
Q Consensus 639 ~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai-Dpl~eIa~i~~~~glwL 717 (764)
.+|.+..+++...|++++.||++++|.+|+++|+++|.++ +.+|+++..+ .+|.+ +|+++|+++|+++|+|+
T Consensus 169 ~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~~~------t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~ 241 (481)
T PRK04366 169 SAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVGED------TAALMLTNPN-TLGLFERNILEIAEIVHEAGGLL 241 (481)
T ss_pred CccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhcccC------CeEEEEeCCC-CccccchHHHHHHHHHHHcCCEE
Confidence 9999999999999999999999988999999999999654 3467777777 78988 69999999999999999
Q ss_pred EEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCce
Q psy13453 718 HVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCS 761 (764)
Q Consensus 718 HVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g 761 (764)
|||+|+..+.+.. ... |--.||+++.|+||||++|+++|
T Consensus 242 iVD~a~~~~~~g~--~~~---~~~GaD~~~~~~hK~l~~P~g~G 280 (481)
T PRK04366 242 YYDGANLNAILGK--ARP---GDMGFDVVHLNLHKTFSTPHGGG 280 (481)
T ss_pred EEEecChhhhccc--CCc---cccCCCEEEEechhhcCCCCCCC
Confidence 9999987553321 111 12246999999999999999886
No 39
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.79 E-value=2e-18 Score=193.67 Aligned_cols=204 Identities=19% Similarity=0.198 Sum_probs=153.7
Q ss_pred CccccccCCCCChHHHHHHHHHHhhc-----ccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCCh
Q psy13453 523 PQFNAYFPTGSSYPSIVGDMLSGAFG-----LIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTA 597 (764)
Q Consensus 523 P~~~~~~~~~~~~~~~lad~l~~~lN-----~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGg 597 (764)
+.||++-.+++.+..++..+ ..++. .....+..+..+....+++.+.+++++|.+++ ..+||+|+
T Consensus 4 ~~yld~aa~~~~~~~v~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~---------~v~~~~g~ 73 (402)
T TIGR02006 4 PIYLDYAATTPVDPRVAEKM-MPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR---------EIVFTSGA 73 (402)
T ss_pred cEEeeCCcCCCCCHHHHHHH-HHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC---------eEEEeCCH
Confidence 57888887777666654433 33331 11111222333456677888999999998653 58999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHh---CCCceEEEecCCCCcccHHHHHHH
Q psy13453 598 SEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAII---GDVPVRQLRSDDNGVLRGDALLTA 674 (764)
Q Consensus 598 TeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~---lGl~v~~Vp~d~~g~md~~~Le~~ 674 (764)
|+++..++.+.+....+ ++..|+++..+|.|+.+++.. .|++++.||++++|.+|+++|+++
T Consensus 74 t~a~~~~l~~l~~~~~~---------------~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~ 138 (402)
T TIGR02006 74 TESNNLAIKGIAHFYKS---------------KGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAA 138 (402)
T ss_pred HHHHHHHHHHHHHhhcC---------------CCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHh
Confidence 99998887655432111 123588899999998877643 589999999999999999999998
Q ss_pred HHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccC
Q psy13453 675 VKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWL 754 (764)
Q Consensus 675 I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l 754 (764)
|.+. +.+|+.+..++.+|.+.|+++|+++|+++|+|+|||+|++.+....+ ++++ .+|++++++||++
T Consensus 139 l~~~------~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~-----~~~~-~~D~~~~s~~K~~ 206 (402)
T TIGR02006 139 IRDD------TILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPIN-----VNEL-KVDLMSISGHKIY 206 (402)
T ss_pred cCCC------CEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccC-----cccc-CCCEEEEehhhhc
Confidence 8643 45888899999999999999999999999999999999998766442 2222 4699999999976
Q ss_pred CCCcCceeeC
Q psy13453 755 LVNFDCSAMW 764 (764)
Q Consensus 755 ~~P~~~g~l~ 764 (764)
.|.|+|++|
T Consensus 207 -gp~G~G~l~ 215 (402)
T TIGR02006 207 -GPKGIGALY 215 (402)
T ss_pred -CCCceEEEE
Confidence 599999985
No 40
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.78 E-value=3.9e-18 Score=189.41 Aligned_cols=201 Identities=19% Similarity=0.164 Sum_probs=153.3
Q ss_pred cccccCCCCChHHHHHHHHHHhh----cccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHH
Q psy13453 525 FNAYFPTGSSYPSIVGDMLSGAF----GLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEA 600 (764)
Q Consensus 525 ~~~~~~~~~~~~~~lad~l~~~l----N~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeA 600 (764)
||++-.+++.+..++.. +..++ .+....+..++.+..+.+++.+++++++|.++ ...+||+|+|++
T Consensus 2 yld~aa~~~~~~~v~~a-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~---------~~i~~t~~~t~a 71 (379)
T TIGR03402 2 YLDNNATTRVDPEVLEA-MLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEP---------DEIIFTSGGTES 71 (379)
T ss_pred cCCCcCCCCCCHHHHHH-HHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCC---------CeEEEeCcHHHH
Confidence 77787777766665433 33222 22222233446677888899999999999865 368999999999
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHh---CCCceEEEecCCCCcccHHHHHHHHHH
Q psy13453 601 TLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAII---GDVPVRQLRSDDNGVLRGDALLTAVKE 677 (764)
Q Consensus 601 Nl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~---lGl~v~~Vp~d~~g~md~~~Le~~I~~ 677 (764)
+..++.+..... + ++.+|+++..+|.++...+.. .|++++.||++.+|.+|+++|+++|++
T Consensus 72 ~~~al~~~~~~~-~---------------~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~~ 135 (379)
T TIGR03402 72 DNTAIKSALAAQ-P---------------EKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAITD 135 (379)
T ss_pred HHHHHHHHHHhc-C---------------CCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcCC
Confidence 998887654321 1 123588899999988766543 599999999998899999999999865
Q ss_pred hhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 678 DLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 678 ~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+ +.+|+.+..++.+|.+.|+++|+++|+++|+++|||++++.+....+ +..+ .+|.+++++|| ++.|
T Consensus 136 ~------~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~-----~~~~-~~D~~~~s~~K-~~gp 202 (379)
T TIGR03402 136 D------TALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPID-----LKEM-NIDMLSLSGHK-LHGP 202 (379)
T ss_pred C------cEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccC-----cccC-CCCEEEEcHHH-cCCC
Confidence 3 45888889999999999999999999999999999999987654432 1211 46999999999 6679
Q ss_pred cCceeeC
Q psy13453 758 FDCSAMW 764 (764)
Q Consensus 758 ~~~g~l~ 764 (764)
.|+|++|
T Consensus 203 ~G~g~l~ 209 (379)
T TIGR03402 203 KGVGALY 209 (379)
T ss_pred CceEEEE
Confidence 9999986
No 41
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.77 E-value=8.7e-18 Score=184.83 Aligned_cols=203 Identities=18% Similarity=0.125 Sum_probs=151.0
Q ss_pred cccccCCCCChHHHHHHHHHHhhc---ccCc--cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHH
Q psy13453 525 FNAYFPTGSSYPSIVGDMLSGAFG---LIGF--SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASE 599 (764)
Q Consensus 525 ~~~~~~~~~~~~~~lad~l~~~lN---~n~~--~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTe 599 (764)
||++-..++.+..+... +..++. .+.. .+..+.....+..++.+++++++|.+++ ..+||+|+|+
T Consensus 1 yld~a~~~~~~~~v~~a-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~---------~v~~~~g~t~ 70 (353)
T TIGR03235 1 YLDHNATTPIDPAVAEA-MLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE---------EVIFTSGATE 70 (353)
T ss_pred CCCCCCCCCCCHHHHHH-HHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC---------eEEEeCCHHH
Confidence 56666666655554333 333321 1111 2233445667788899999999998753 5899999999
Q ss_pred HHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHH---hCCCceEEEecCCCCcccHHHHHHHHH
Q psy13453 600 ATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAI---IGDVPVRQLRSDDNGVLRGDALLTAVK 676 (764)
Q Consensus 600 ANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~---~lGl~v~~Vp~d~~g~md~~~Le~~I~ 676 (764)
++..++.+...... . ..+..|+++..+|.|+..+.. ..|++++.||+++++.+|+++|+++++
T Consensus 71 a~~~~l~~l~~~~~-~-------------~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~ 136 (353)
T TIGR03235 71 SNNLAILGLARAGE-Q-------------KGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIR 136 (353)
T ss_pred HHHHHHHHHHHhcc-c-------------CCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCC
Confidence 98887765433210 0 012368899999999876643 468899999999889999999999885
Q ss_pred HhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC
Q psy13453 677 EDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 677 ~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~ 756 (764)
+. +.+|+.+..++.+|.+.|+++|.++|+++|+|+|||+|++.+....+- +. ..+|.+++++|||+ .
T Consensus 137 ~~------~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~-----~~-~~~D~~~~s~~K~~-g 203 (353)
T TIGR03235 137 PD------TLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDL-----SA-DRIDLISCSGHKIY-G 203 (353)
T ss_pred CC------CEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCccccc-----cc-cCCCEEEeehhhcC-C
Confidence 42 458889999999999999999999999999999999999887665431 11 14699999999985 6
Q ss_pred CcCceeeC
Q psy13453 757 NFDCSAMW 764 (764)
Q Consensus 757 P~~~g~l~ 764 (764)
|.|+|++|
T Consensus 204 p~g~g~l~ 211 (353)
T TIGR03235 204 PKGIGALV 211 (353)
T ss_pred CCceEEEE
Confidence 99999885
No 42
>PRK14012 cysteine desulfurase; Provisional
Probab=99.75 E-value=1.8e-17 Score=186.02 Aligned_cols=204 Identities=20% Similarity=0.226 Sum_probs=150.1
Q ss_pred CccccccCCCCChHHHHHHHHHHhh---cccCcccc----CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeC
Q psy13453 523 PQFNAYFPTGSSYPSIVGDMLSGAF---GLIGFSWL----SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQS 595 (764)
Q Consensus 523 P~~~~~~~~~~~~~~~lad~l~~~l---N~n~~~~~----~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTs 595 (764)
+.||++-.+++.+..++.. +..++ +....... .+-.+...-.++.+++++++|.+.+ ..+||+
T Consensus 4 ~iyld~a~~~~~~~~v~~a-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~---------~v~~~~ 73 (404)
T PRK14012 4 PIYLDYSATTPVDPRVAEK-MMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPR---------EIVFTS 73 (404)
T ss_pred eEEecCcCCCCCCHHHHHH-HHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC---------eEEEeC
Confidence 4688888777766665443 33333 22111111 1111234455678899999998653 579999
Q ss_pred ChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHh---CCCceEEEecCCCCcccHHHHH
Q psy13453 596 TASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAII---GDVPVRQLRSDDNGVLRGDALL 672 (764)
Q Consensus 596 GgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~---lGl~v~~Vp~d~~g~md~~~Le 672 (764)
|||+++.+++.+......+ ++..|++++.+|.++..++.. .|++++.|++|++|.+|+++|+
T Consensus 74 g~t~al~~~l~~l~~~~~~---------------~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~ 138 (404)
T PRK14012 74 GATESDNLAIKGAAHFYQK---------------KGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLE 138 (404)
T ss_pred CHHHHHHHHHHHHHHhhcC---------------CCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHH
Confidence 9999999888765432211 123588899999998777654 5999999999999999999999
Q ss_pred HHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCc
Q psy13453 673 TAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHK 752 (764)
Q Consensus 673 ~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK 752 (764)
++|+++ +.+|+.+..++.+|.+.|+++|+++|+++|+++|+|+|++.+....+ +..+ .+|.+++++||
T Consensus 139 ~~i~~~------t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~-----~~~~-~~D~~~~s~~K 206 (404)
T PRK14012 139 AAMRDD------TILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPID-----LSKL-KVDLMSFSAHK 206 (404)
T ss_pred HhcCCC------CEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccC-----cccC-CCCEEEEehhh
Confidence 999654 34888999999999999999999999999999999999998765432 1111 46999999999
Q ss_pred cCCCCcCceeeC
Q psy13453 753 WLLVNFDCSAMW 764 (764)
Q Consensus 753 ~l~~P~~~g~l~ 764 (764)
++ .|.++|++|
T Consensus 207 ~~-gp~g~G~l~ 217 (404)
T PRK14012 207 IY-GPKGIGALY 217 (404)
T ss_pred cc-CCCceEEEE
Confidence 55 588999875
No 43
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.74 E-value=4.4e-17 Score=180.23 Aligned_cols=203 Identities=16% Similarity=0.107 Sum_probs=152.3
Q ss_pred cccccCCCCChHHHHHHHHHH---hh-cccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHH
Q psy13453 525 FNAYFPTGSSYPSIVGDMLSG---AF-GLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEA 600 (764)
Q Consensus 525 ~~~~~~~~~~~~~~lad~l~~---~l-N~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeA 600 (764)
||++-..++.+..++..+... .+ |+....+..++....+..++.+++++++|.+.. ...++|+|+|++
T Consensus 2 yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~--------~~v~~~~g~t~a 73 (373)
T cd06453 2 YLDNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSP--------DEIIFTRNTTEA 73 (373)
T ss_pred cccCccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC--------CeEEEeCCHHHH
Confidence 566666666555544433322 22 333345666778888999999999999998721 357899999999
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH----HHHHHhCCCceEEEecCCCCcccHHHHHHHHH
Q psy13453 601 TLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV----EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVK 676 (764)
Q Consensus 601 Nl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv----~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~ 676 (764)
+..++.+..... .++..|++++.+|++. .+.++..|++++.||++.++++|+++|++.|.
T Consensus 74 ~~~~~~~l~~~~----------------~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~ 137 (373)
T cd06453 74 INLVAYGLGRAN----------------KPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLT 137 (373)
T ss_pred HHHHHHHhhhcC----------------CCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhc
Confidence 877776543210 0123588899999885 44456789999999999899999999999996
Q ss_pred HhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC
Q psy13453 677 EDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 677 ~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~ 756 (764)
++ +-+|+.+..+|.+|.++|+++|.++|++||+|+|+|+|++.+....+ +..+ .+|++++++|||++.
T Consensus 138 ~~------~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~~K~~~~ 205 (373)
T cd06453 138 ER------TKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVD-----VQDL-GCDFLAFSGHKMLGP 205 (373)
T ss_pred CC------ceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeee-----cccc-CCCEEEeccccccCC
Confidence 53 44888899999999999999999999999999999999987654332 1111 469999999999886
Q ss_pred CcCceeeC
Q psy13453 757 NFDCSAMW 764 (764)
Q Consensus 757 P~~~g~l~ 764 (764)
.++|+++
T Consensus 206 -~g~g~~~ 212 (373)
T cd06453 206 -TGIGVLY 212 (373)
T ss_pred -CCcEEEE
Confidence 7888764
No 44
>PRK02948 cysteine desulfurase; Provisional
Probab=99.74 E-value=4.3e-17 Score=181.17 Aligned_cols=203 Identities=17% Similarity=0.179 Sum_probs=153.8
Q ss_pred cccccCCCCChHHHHHH---HHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHH
Q psy13453 525 FNAYFPTGSSYPSIVGD---MLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEAT 601 (764)
Q Consensus 525 ~~~~~~~~~~~~~~lad---~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeAN 601 (764)
||++-.+++.+..++-. ++...+.+....+..+.....+.+++.+++++++|.+++ ..+||+|+|++|
T Consensus 3 yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~---------~i~~~~g~t~a~ 73 (381)
T PRK02948 3 YLDYAATTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQ---------GIYFTSGGTESN 73 (381)
T ss_pred eccCCCCCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCC---------eEEEeCcHHHHH
Confidence 67777666665555433 333323333445556677778889999999999998653 578999999999
Q ss_pred HHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHH---HhCCCceEEEecCCCCcccHHHHHHHHHHh
Q psy13453 602 LVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSA---IIGDVPVRQLRSDDNGVLRGDALLTAVKED 678 (764)
Q Consensus 602 l~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa---~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~ 678 (764)
..++.+....... ++.+|+++..+|.|+..++ +..|.+++.||++++|.+|+++|++.+++.
T Consensus 74 ~~~~~~~~~~~~~---------------~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~ 138 (381)
T PRK02948 74 YLAIQSLLNALPQ---------------NKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAITPD 138 (381)
T ss_pred HHHHHHHHHhccC---------------CCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCCC
Confidence 8887766432110 1236888999999987764 446889999999988999999999988543
Q ss_pred hhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc
Q psy13453 679 LAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 679 ~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~ 758 (764)
+.+|+.+..++.+|.+.|+++|.++|+++|+|+|||++++.+..... +... .+|.++.++||+++ |.
T Consensus 139 ------~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~-----~~~~-~~d~~~~s~~K~~g-p~ 205 (381)
T PRK02948 139 ------TVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPID-----VFEM-GIDSLSVSAHKIYG-PK 205 (381)
T ss_pred ------CEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccC-----cccC-CCCEEEecHHhcCC-CC
Confidence 45899999999999999999999999999999999998876543322 1111 46999999999765 99
Q ss_pred CceeeC
Q psy13453 759 DCSAMW 764 (764)
Q Consensus 759 ~~g~l~ 764 (764)
|+|++|
T Consensus 206 G~G~l~ 211 (381)
T PRK02948 206 GVGAVY 211 (381)
T ss_pred cEEEEE
Confidence 999875
No 45
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.74 E-value=8e-17 Score=183.12 Aligned_cols=233 Identities=15% Similarity=0.114 Sum_probs=165.2
Q ss_pred ChhhHhhcCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHH------HHHHHHhhcccCccccC
Q psy13453 483 EPGYLASLVPGEMPEEGEDWRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIV------GDMLSGAFGLIGFSWLS 556 (764)
Q Consensus 483 ~p~~l~~~l~~~lP~~g~~~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~l------ad~l~~~lN~n~~~~~~ 556 (764)
-|.+++...+.++|+.+ +.+++++++.+....+.....|+++++.-..+...+..+ +++++. +|.+.. +.
T Consensus 31 ~p~~~~~~~~~~lp~~~-~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~-y~~~~~--~~ 106 (447)
T PRK00451 31 IPEELRLKRPLDLPPGL-SEMELLRHLRELAAKNKTAEEYPSFLGAGAYDHYIPAVVDHIISRSEFYTA-YTPYQP--EI 106 (447)
T ss_pred CCHHHHhCCCCCCCCCC-CHHHHHHHHHHHHhcCCCcCcCcccCcccccCCcCcHHHHHHHhchhHHHh-cCCCCC--cc
Confidence 47778877788899976 999999999997755554455788877432222222222 233333 443222 34
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEe
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT 636 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~ 636 (764)
++...+.+.+...|+++++|.+.+ .+++|+|||+++ .++..|+... ++..|++
T Consensus 107 ~~g~~~~~~e~~~~la~l~g~~~~---------~v~~~~g~t~~~-~~~~~a~~~~-----------------~g~~Vlv 159 (447)
T PRK00451 107 SQGTLQAIFEYQTMICELTGMDVA---------NASMYDGATALA-EAALMAVRIT-----------------KRKKVLV 159 (447)
T ss_pred chHHHHHHHHHHHHHHHHhCCCcc---------eEEecCcHHHHH-HHHHHHHHhc-----------------CCCEEEE
Confidence 566778888888999999999763 578999999754 4444444210 1225788
Q ss_pred cCCcchhHHHHHHh----CCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh
Q psy13453 637 SDQSNSSVEKSAII----GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE 712 (764)
Q Consensus 637 S~~aH~Sv~kAa~~----lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~ 712 (764)
++.+|.+..+++.. .|++++.||++++ ++|+++|+++|.++ +.+|+++.. |.+|.++|+++|+++|++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~~~------t~~v~l~~p-n~tG~v~~l~~I~~~a~~ 231 (447)
T PRK00451 160 SGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVDDD------TAAVVVQYP-NFFGVIEDLEEIAEIAHA 231 (447)
T ss_pred eCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcCCC------eEEEEEECC-CCCCeeCCHHHHHHHHHH
Confidence 99999999988765 6899999999887 99999999999654 347777776 779999999999999999
Q ss_pred cCCEEEE--eccccccccccchhhhhhcCCCcccEEEEcCCcc-----CCCCcCceee
Q psy13453 713 YNIWLHV--DAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKW-----LLVNFDCSAM 763 (764)
Q Consensus 713 ~glwLHV--DaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~-----l~~P~~~g~l 763 (764)
+|+|++| |+...+ .+..+ +--.+|.++.+.||| ++.| ++|++
T Consensus 232 ~~~~~iv~~d~~~~g-~~~~~-------~~~~~D~~~~s~~k~~~~~~~~Gp-g~G~l 280 (447)
T PRK00451 232 GGALFIVGVDPVSLG-LLKPP-------GEYGADIVVGEGQPLGIPLSFGGP-YLGFF 280 (447)
T ss_pred CCCEEEEEcChHHhc-cCCCc-------ccCCCCEEEECCCcCCCCCCCCCC-CchHH
Confidence 9999999 654322 22111 122569999999997 4444 56654
No 46
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.72 E-value=2.1e-16 Score=176.91 Aligned_cols=204 Identities=14% Similarity=0.091 Sum_probs=151.4
Q ss_pred ccccccCCCCChHHHHHHHHHHhh-----cccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChH
Q psy13453 524 QFNAYFPTGSSYPSIVGDMLSGAF-----GLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTAS 598 (764)
Q Consensus 524 ~~~~~~~~~~~~~~~lad~l~~~l-----N~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgT 598 (764)
.||++-..++.+..++ +.+..++ |.+...+..++.......++.+.+++++|.++. ...+||+|+|
T Consensus 20 ~yld~~~~~~~p~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~--------~~v~~~~g~t 90 (403)
T TIGR01979 20 VYLDSAATSQKPQQVI-DAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASD--------EEIVFTRGTT 90 (403)
T ss_pred EEEeCccccCCCHHHH-HHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCC--------CeEEEeCCHH
Confidence 5788887776555544 4444443 222233444555666777899999999998731 3689999999
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH----HHHHHhCCCceEEEecCCCCcccHHHHHHH
Q psy13453 599 EATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV----EKSAIIGDVPVRQLRSDDNGVLRGDALLTA 674 (764)
Q Consensus 599 eANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv----~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~ 674 (764)
+++..++.+...... .++..|++++.+|.|. .+++...|+.++.||++++|.+|+++|++.
T Consensus 91 ~~l~~~~~~~~~~~~---------------~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~ 155 (403)
T TIGR01979 91 ESINLVAYSWGDSNL---------------KAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKL 155 (403)
T ss_pred HHHHHHHHHhhhhcC---------------CCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHH
Confidence 997665554322111 1123688899999874 456677899999999999999999999999
Q ss_pred HHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccC
Q psy13453 675 VKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWL 754 (764)
Q Consensus 675 I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l 754 (764)
+.+. +-+|+.+..++.+|.+.|+++|+++|++||+|+|||+||+.+....+ +... .+|.++.++||++
T Consensus 156 i~~~------~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~-----~~~~-~~d~~~~s~~K~~ 223 (403)
T TIGR01979 156 LTEK------TKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVD-----VQAL-DCDFYVFSGHKMY 223 (403)
T ss_pred hccC------CeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccC-----cccc-CCCEEEEeccccc
Confidence 8653 55888999999999999999999999999999999999987654322 1112 3699999999976
Q ss_pred CCCcCceeeC
Q psy13453 755 LVNFDCSAMW 764 (764)
Q Consensus 755 ~~P~~~g~l~ 764 (764)
+ |.|+|++|
T Consensus 224 g-p~G~g~l~ 232 (403)
T TIGR01979 224 G-PTGIGVLY 232 (403)
T ss_pred C-CCCceEEE
Confidence 5 98999875
No 47
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.71 E-value=4.2e-16 Score=172.80 Aligned_cols=203 Identities=19% Similarity=0.139 Sum_probs=156.0
Q ss_pred cccccCCCCChHHHHHHHHHHh---h-cccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHH
Q psy13453 525 FNAYFPTGSSYPSIVGDMLSGA---F-GLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEA 600 (764)
Q Consensus 525 ~~~~~~~~~~~~~~lad~l~~~---l-N~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeA 600 (764)
||++-.+++.+..++-.+.... . |.+...+..+....++-+++.+.+++++|.+++ ...+||+|+|++
T Consensus 2 Yld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~--------~~v~~~~~~t~a 73 (371)
T PF00266_consen 2 YLDNAGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPD--------EEVVFTSNGTEA 73 (371)
T ss_dssp EEBTSSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTT--------EEEEEESSHHHH
T ss_pred EeeCCCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccc--------cccccccccchh
Confidence 5666666666666554443332 2 222355566777888889999999999999872 257899999998
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHH----HHhCCCceEEEecCCCCcccHHHHHHHHH
Q psy13453 601 TLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVK 676 (764)
Q Consensus 601 Nl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kA----a~~lGl~v~~Vp~d~~g~md~~~Le~~I~ 676 (764)
+..++...+.... ++..|+++...|+|...+ ++..|++++.||.+.++.+|+++++++|.
T Consensus 74 ~~~~~~~l~~~~~----------------~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~ 137 (371)
T PF00266_consen 74 LNAVASSLLNPLK----------------PGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALN 137 (371)
T ss_dssp HHHHHHHHHHHGT----------------TTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHH
T ss_pred hhhhhhccccccc----------------cccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhc
Confidence 7777766654321 123588899999998733 44679999999999999999999999997
Q ss_pred HhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC
Q psy13453 677 EDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 677 ~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~ 756 (764)
++ +.+|+.++.++.+|.+.|+++|+++|+++|+|++|||+++.+.+..+ ++.+ .+|.+++++|| ++.
T Consensus 138 ~~------~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id-----~~~~-~~D~~~~s~~K-l~g 204 (371)
T PF00266_consen 138 PD------TRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPID-----LDEL-GADFLVFSSHK-LGG 204 (371)
T ss_dssp TT------ESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS-------TTTT-TESEEEEESTS-TTS
T ss_pred cc------cceEEeecccccccEEeeeceehhhhhccCCceeEechhcccccccc-----cccc-ccceeeecccc-cCC
Confidence 65 44999999999999999999999999999999999999999877654 2222 46999999999 888
Q ss_pred CcCceeeC
Q psy13453 757 NFDCSAMW 764 (764)
Q Consensus 757 P~~~g~l~ 764 (764)
|.|+|++|
T Consensus 205 p~G~g~l~ 212 (371)
T PF00266_consen 205 PPGLGFLY 212 (371)
T ss_dssp SSTEEEEE
T ss_pred CCchhhhe
Confidence 99999986
No 48
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.71 E-value=1.6e-16 Score=175.86 Aligned_cols=167 Identities=17% Similarity=0.230 Sum_probs=133.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecC
Q psy13453 559 ACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSD 638 (764)
Q Consensus 559 ~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~ 638 (764)
.......++.+++++++|.++. ...+||+|+|+++..++.+. .. ++..|+++.
T Consensus 41 ~~~~~~~~~~~~la~~~~~~~~--------~~v~~~~g~t~al~~~~~~~----~~---------------~gd~vl~~~ 93 (376)
T TIGR01977 41 RASREVEETRQLLAKLFNAPSS--------AHVVFTNNATTALNIALKGL----LK---------------EGDHVITTP 93 (376)
T ss_pred HHHHHHHHHHHHHHHHhCcCCC--------CeEEEeCCHHHHHHHHHHhc----cC---------------CCCEEEECc
Confidence 3456777888999999998642 25789999999887665431 11 122577888
Q ss_pred CcchhHHH----HHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcC
Q psy13453 639 QSNSSVEK----SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYN 714 (764)
Q Consensus 639 ~aH~Sv~k----Aa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~g 714 (764)
.+|.++.. .++..|..++.|+++.++.+|+++|++++++. +.+|+.+..++.+|.+.|+++|.++|+++|
T Consensus 94 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~------~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~ 167 (376)
T TIGR01977 94 MEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIKTN------TKLIVVSHASNVTGTILPIEEIGELAQENG 167 (376)
T ss_pred chhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcCCC------CeEEEEECCCCCccccCCHHHHHHHHHHcC
Confidence 89988654 45556999999999988999999999998543 558889999999999999999999999999
Q ss_pred CEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 715 IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 715 lwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+|++||+|++.+....+-. . ..+|++++++|||++.|.|+|++|
T Consensus 168 ~~livD~a~~~g~~~~~~~---~---~~~D~~~~s~~K~l~~p~g~g~l~ 211 (376)
T TIGR01977 168 IFFILDAAQTAGVIPIDMT---E---LAIDMLAFTGHKGLLGPQGTGGLY 211 (376)
T ss_pred CEEEEEhhhccCccCCCch---h---cCCCEEEecccccccCCCCceEEE
Confidence 9999999999876644311 1 246999999999999999999875
No 49
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.70 E-value=4e-16 Score=173.61 Aligned_cols=205 Identities=18% Similarity=0.166 Sum_probs=144.3
Q ss_pred cccccCCCCChHHHHHHHHHHhhc----ccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHH
Q psy13453 525 FNAYFPTGSSYPSIVGDMLSGAFG----LIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEA 600 (764)
Q Consensus 525 ~~~~~~~~~~~~~~lad~l~~~lN----~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeA 600 (764)
||++-.+++.+..+ -+.+..+++ +....+..+.......++.+..+++.+|..+. ...+||+|+|++
T Consensus 2 yld~aa~~~~~~~v-~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~--------~~i~~t~g~tea 72 (382)
T TIGR03403 2 YLDNNATTMLDPKV-KELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDL--------DDIIITSCATES 72 (382)
T ss_pred cccCcCCCCCCHHH-HHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCC--------CeEEEeCCHHHH
Confidence 67777666665543 333433332 11222222333444555566666667776221 368899999999
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHH---hCCCceEEEecCCCCcccHHHHHHHHHH
Q psy13453 601 TLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAI---IGDVPVRQLRSDDNGVLRGDALLTAVKE 677 (764)
Q Consensus 601 Nl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~---~lGl~v~~Vp~d~~g~md~~~Le~~I~~ 677 (764)
+.+++.+.......+ .++..|+++..+|.|+..++. ..|++++.||++++|.+|+++|+++|.+
T Consensus 73 l~~~~~~~~~~~~~~-------------~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~ 139 (382)
T TIGR03403 73 NNWVLKGVYFDEILK-------------GGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAITE 139 (382)
T ss_pred HHHHHHHHHHhhccc-------------CCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhccc
Confidence 888776542211100 012358889999999877754 4789999999998999999999999865
Q ss_pred hhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 678 DLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 678 ~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
. +-+|+.+..++.+|.+.|+++|+++|+++|+|+|||+|++.+....+- .. ..+|.+++++|||+ .|
T Consensus 140 ~------t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~-----~~-~~~D~~~~s~~K~~-gp 206 (382)
T TIGR03403 140 K------TALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDV-----QK-AGVDFLSFSAHKFH-GP 206 (382)
T ss_pred C------CeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCc-----cc-cCCCEEEEcchhhC-CC
Confidence 4 347888999999999999999999999999999999999876544321 11 14699999999985 59
Q ss_pred cCceeeC
Q psy13453 758 FDCSAMW 764 (764)
Q Consensus 758 ~~~g~l~ 764 (764)
.|+|++|
T Consensus 207 ~G~g~l~ 213 (382)
T TIGR03403 207 KGVGGLY 213 (382)
T ss_pred CceEEEE
Confidence 9999875
No 50
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.70 E-value=5e-16 Score=173.58 Aligned_cols=167 Identities=13% Similarity=0.070 Sum_probs=135.1
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+.+++++|.+. .+||+|+|++|..++.+.. . ++..|+++..+|
T Consensus 63 ~~~~~l~~~lA~~~g~~~-----------~~~~~g~t~a~~~al~~l~----~---------------~gd~Vlv~~~~h 112 (387)
T PRK09331 63 PPIADFHEDLAEFLGMDE-----------ARVTHGAREGKFAVMHSLC----K---------------KGDYVVLDGLAH 112 (387)
T ss_pred hHHHHHHHHHHHHhCCCc-----------EEEeCCHHHHHHHHHHHhc----C---------------CCCEEEECCCch
Confidence 345667778888888754 5799999999988776542 1 122578899999
Q ss_pred hhHHHHHHhCCCceEEEec--CCCCcccHHHHHHHHHHhhh-cCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEE
Q psy13453 642 SSVEKSAIIGDVPVRQLRS--DDNGVLRGDALLTAVKEDLA-KGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLH 718 (764)
Q Consensus 642 ~Sv~kAa~~lGl~v~~Vp~--d~~g~md~~~Le~~I~~~~~-~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLH 718 (764)
+++..++...|++++.+|+ ++++.+|+++|+++|++..+ .+..+-+|+.+..++.+|.+.|+++|+++|++||+++|
T Consensus 113 ~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~li 192 (387)
T PRK09331 113 YTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFL 192 (387)
T ss_pred HHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEE
Confidence 9999999999999999998 77899999999999976422 22346788889999999999999999999999999999
Q ss_pred EeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 719 VDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 719 VDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
||+||+.+.+..+-.. . .+|.++.++|||++.|.+.|+++
T Consensus 193 vD~a~~~g~~~~~~~~---~---g~D~~~~s~~K~l~~~~~~G~l~ 232 (387)
T PRK09331 193 LNGAYTVGRMPVDGKK---L---GADFIVGSGHKSMAASAPSGVLA 232 (387)
T ss_pred EECCcccCCcCCCHHH---c---CCCEEEeeCcccccCCCCEEEEE
Confidence 9999998765433211 1 35999999999999999999874
No 51
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.68 E-value=6.2e-16 Score=173.63 Aligned_cols=204 Identities=12% Similarity=0.023 Sum_probs=153.1
Q ss_pred ccccccCCCCChHHHHHHHHHHhh-----cccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChH
Q psy13453 524 QFNAYFPTGSSYPSIVGDMLSGAF-----GLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTAS 598 (764)
Q Consensus 524 ~~~~~~~~~~~~~~~lad~l~~~l-----N~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgT 598 (764)
.||++-.+++.+..++.. +..++ |.....+..++.+..+..++++.+++++|.++. ...+||+|+|
T Consensus 25 iYld~a~~~~~~~~v~~a-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~--------~~v~~t~g~t 95 (406)
T PRK09295 25 AYLDSAASAQKPSQVIDA-EAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSA--------EELVFVRGTT 95 (406)
T ss_pred EEEeCcccccCCHHHHHH-HHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCC--------CeEEEeCCHH
Confidence 799999888776665533 33333 332344555667778888899999999997321 3689999999
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH----HHHHHhCCCceEEEecCCCCcccHHHHHHH
Q psy13453 599 EATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV----EKSAIIGDVPVRQLRSDDNGVLRGDALLTA 674 (764)
Q Consensus 599 eANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv----~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~ 674 (764)
+++..++.+...... .++..|++++.+|.+. ...++..|++++.||++.+|.+|+++|+++
T Consensus 96 ~~l~~~~~~~~~~~~---------------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~ 160 (406)
T PRK09295 96 EGINLVANSWGNSNV---------------RAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPAL 160 (406)
T ss_pred HHHHHHHHHhhhhcC---------------CCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHh
Confidence 997766543221111 1123588899999764 455667899999999998999999999999
Q ss_pred HHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccC
Q psy13453 675 VKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWL 754 (764)
Q Consensus 675 I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l 754 (764)
+.++ +-+|+.+..++.+|.+.|+++|+++|+++|+|+|||+||+.+....+ +..+ .+|.+++++||++
T Consensus 161 i~~~------t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~-----~~~~-~~D~~~~s~~K~~ 228 (406)
T PRK09295 161 FDER------TRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVD-----VQAL-DCDFYVFSGHKLY 228 (406)
T ss_pred cCCC------cEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccC-----chhc-CCCEEEeehhhcc
Confidence 8653 45888999999999999999999999999999999999987654332 1111 4699999999954
Q ss_pred CCCcCceeeC
Q psy13453 755 LVNFDCSAMW 764 (764)
Q Consensus 755 ~~P~~~g~l~ 764 (764)
.|.|+|++|
T Consensus 229 -gp~G~G~l~ 237 (406)
T PRK09295 229 -GPTGIGILY 237 (406)
T ss_pred -CCCCcEEEE
Confidence 599999875
No 52
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.67 E-value=2e-15 Score=168.97 Aligned_cols=205 Identities=12% Similarity=0.036 Sum_probs=150.8
Q ss_pred CccccccCCCCChHHHHHHHHHHhhc-----ccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCCh
Q psy13453 523 PQFNAYFPTGSSYPSIVGDMLSGAFG-----LIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTA 597 (764)
Q Consensus 523 P~~~~~~~~~~~~~~~lad~l~~~lN-----~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGg 597 (764)
-.||++-.+++.+..++ +.+..+++ .....+..++.......++.+.+++++|.++. ...+||+|+
T Consensus 17 ~iyld~a~~~~~p~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~--------~~i~~t~g~ 87 (398)
T TIGR03392 17 TVYLDSAATALKPQAVI-DATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDA--------ENIVWTRGT 87 (398)
T ss_pred eEEeeCccccCCCHHHH-HHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC--------CeEEEeCCh
Confidence 36899988877665543 44444432 11223334556667778899999999998421 357899999
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH----HHHHHhCCCceEEEecCCCCcccHHHHHH
Q psy13453 598 SEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV----EKSAIIGDVPVRQLRSDDNGVLRGDALLT 673 (764)
Q Consensus 598 TeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv----~kAa~~lGl~v~~Vp~d~~g~md~~~Le~ 673 (764)
|+++..++.+...... .++-.|++++.+|+|. ...++..|++++.||++.++.+|+++|++
T Consensus 88 t~~l~~~~~~~~~~~~---------------~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~ 152 (398)
T TIGR03392 88 TESINLVAQSYARPRL---------------QPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPE 152 (398)
T ss_pred HHHHHHHHHHhhhccC---------------CCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHH
Confidence 9997776654321100 1123588899999774 45567789999999999889999999999
Q ss_pred HHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCcc
Q psy13453 674 AVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKW 753 (764)
Q Consensus 674 ~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~ 753 (764)
+|.+. +-+|+.+..++.+|.+.|+++|+++|+++|++++||++|+.+....+ +..+ .+|.+++++||+
T Consensus 153 ~i~~~------t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~-----~~~~-~~d~~~~s~~K~ 220 (398)
T TIGR03392 153 LLTPR------TRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPD-----VQAL-DIDFYAFSGHKL 220 (398)
T ss_pred HhccC------ceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCC-----hhhc-CCCEEEEecccc
Confidence 98654 34788899999999999999999999999999999999986544321 1112 369999999995
Q ss_pred CCCCcCceeeC
Q psy13453 754 LLVNFDCSAMW 764 (764)
Q Consensus 754 l~~P~~~g~l~ 764 (764)
+ .|.|+|++|
T Consensus 221 ~-gp~G~G~l~ 230 (398)
T TIGR03392 221 Y-GPTGIGVLY 230 (398)
T ss_pred c-CCCceEEEE
Confidence 5 588999875
No 53
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.67 E-value=1.4e-15 Score=167.29 Aligned_cols=194 Identities=13% Similarity=0.001 Sum_probs=144.5
Q ss_pred ccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHH
Q psy13453 528 YFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILV 607 (764)
Q Consensus 528 ~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~a 607 (764)
|.+++...+..+.+.+...+. ...++...++.+++.+++++++|.++. ...++|+|||+++..++.+
T Consensus 3 ~~~~~~~~~~~v~~a~~~~~~-----~~~~~~~~~~~~~~~~~la~~~g~~~~--------~~~~~~~~~t~al~~~~~~ 69 (356)
T cd06451 3 LIPGPSNVPPRVLKAMNRPML-----GHRSPEFLALMDEILEGLRYVFQTENG--------LTFLLSGSGTGAMEAALSN 69 (356)
T ss_pred ccCCCcCCCHHHHHHhCCCcc-----CCCCHHHHHHHHHHHHHHHHHhcCCCC--------CEEEEecCcHHHHHHHHHH
Confidence 344444444555555543221 124667778888999999999998542 2467899999998777754
Q ss_pred HHHHHhhhhccCCCCCccccccCceEEEecCCcchh--HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCc
Q psy13453 608 AKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS--VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIP 685 (764)
Q Consensus 608 AR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S--v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p 685 (764)
.. . ++-.|+++...|++ +...++..|.+++.||+++++.+|+++|++.+++. .|
T Consensus 70 ~~----~---------------~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~-----~~ 125 (356)
T cd06451 70 LL----E---------------PGDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQH-----DI 125 (356)
T ss_pred hC----C---------------CCCEEEEecCCchhHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhcc-----CC
Confidence 31 1 11246667778887 45677889999999999988899999999999751 24
Q ss_pred eEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 686 CCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 686 ~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
-+|+++..++.+|.+.|+++|+++|+++|+|+++|++|+.+....+-. . ..+|.++.++|||++.|.++|+++
T Consensus 126 ~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~-----~-~~~d~~~~s~~K~l~~p~g~G~l~ 198 (356)
T cd06451 126 KAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMD-----E-WGVDVAYTGSQKALGAPPGLGPIA 198 (356)
T ss_pred CEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCcccccc-----c-cCccEEEecCchhccCCCCcceeE
Confidence 578888889999999999999999999999999999987543322111 1 135999999999999999999874
No 54
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.66 E-value=3.1e-15 Score=165.08 Aligned_cols=220 Identities=13% Similarity=0.133 Sum_probs=163.6
Q ss_pred ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc
Q psy13453 11 AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS 90 (764)
Q Consensus 11 ~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~ 90 (764)
.+.++. .|||+.|+++.+|+.. +.||+++++++|+++|+++|+++ +.+++.+.+++++|.++|+++|++
T Consensus 107 vl~~~~---~h~s~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~i~~~-----~~~vi~~~~~~~tG~~~~l~~I~~ 175 (371)
T PRK13520 107 IVVPES---AHFSFDKAADMLGVEL---RRAPLDDDYRVDVKAVEDLIDDN-----TIGIVGIAGTTELGQVDPIPELSK 175 (371)
T ss_pred EEecCc---chHHHHHHHHHcCceE---EEecCCCCCcCCHHHHHHHHhhC-----CEEEEEEcCCcCCcccCCHHHHHH
Confidence 667776 7999999999999876 99999999999999999999864 234567889999999999999886
Q ss_pred -----CCCceeccccc---------------------------ccc------ceeeeecCCCcccccccccccc----CC
Q psy13453 91 -----NGPLKVGGVLR---------------------------RVY------SSCLVPRGQKSLRTTVLFHFLF----QH 128 (764)
Q Consensus 91 -----~~wlHVDa~l~---------------------------~~y------~s~ll~rd~~~l~~~~s~~~d~----~d 128 (764)
++|+|||++.. +++ ++++++++++.+.. +.....| ..
T Consensus 176 l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~-l~~~~~~~~~~~~ 254 (371)
T PRK13520 176 IALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDESYLDA-LAVDTPYLTSKKQ 254 (371)
T ss_pred HHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEEEcCHHHHHh-hcccCccccCCCC
Confidence 89999999531 111 01233332221111 0000001 12
Q ss_pred cccCCCC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccC
Q psy13453 129 WQIPLGR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGT 207 (764)
Q Consensus 129 ~tle~SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~ 207 (764)
+...|+| ...++.+|++|..++.+|+.++.++..++++++.+.|++. +|+++.+|..++++|++.+
T Consensus 255 ~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~------------ 321 (371)
T PRK13520 255 ATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFEPVIEPVLNIVAFDDPN------------ 321 (371)
T ss_pred cceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCceEEEEecCC------------
Confidence 3345677 3456688999999999999999999999999999999987 8987778888899996531
Q ss_pred ccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 208 ISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 208 ~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
..++.++|.++|+.... ..+..++|+++ ++.+++++++.+++.++++.
T Consensus 322 --------~~~v~~~L~~~gi~v~~---~~~~~~iRis~-~~~~t~edi~~~~~~l~~~~ 369 (371)
T PRK13520 322 --------PDEVREKLRERGWRVSV---TRCPEALRIVC-MPHVTREHIENFLEDLKEVK 369 (371)
T ss_pred --------HHHHHHHHHHCCceecc---CCCCCEEEEEE-ECCCCHHHHHHHHHHHHHHh
Confidence 24678888888874332 23456899974 56889999999999998764
No 55
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.66 E-value=2.7e-15 Score=167.99 Aligned_cols=205 Identities=12% Similarity=0.051 Sum_probs=151.9
Q ss_pred CccccccCCCCChHHHHHHHHHHhhcc-----cCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCCh
Q psy13453 523 PQFNAYFPTGSSYPSIVGDMLSGAFGL-----IGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTA 597 (764)
Q Consensus 523 P~~~~~~~~~~~~~~~lad~l~~~lN~-----n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGg 597 (764)
..||++-.+++.+..++. .+..++.. ....+..+........++++.+++++|.++. ...+||+|+
T Consensus 20 ~~yld~a~~~~~~~~v~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~--------~~i~~~~~~ 90 (401)
T PRK10874 20 GVYLDSAATALKPQAVIE-ATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDA--------KNIVWTRGT 90 (401)
T ss_pred eEEEeCCcccCCCHHHHH-HHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCC--------CEEEEECCH
Confidence 468999888876666553 33444422 1223334456677888899999999998321 367899999
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh----HHHHHHhCCCceEEEecCCCCcccHHHHHH
Q psy13453 598 SEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS----VEKSAIIGDVPVRQLRSDDNGVLRGDALLT 673 (764)
Q Consensus 598 TeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S----v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~ 673 (764)
|+++..++.+...... .++-.|++++.+|+| +.+.++..|++++.||++.++.+|+++|++
T Consensus 91 t~~i~~~~~~~~~~~~---------------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~ 155 (401)
T PRK10874 91 TESINLVAQSYARPRL---------------QPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPE 155 (401)
T ss_pred HHHHHHHHHHhhhccC---------------CCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHH
Confidence 9997666544311100 112358889999976 455667789999999999889999999999
Q ss_pred HHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCcc
Q psy13453 674 AVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKW 753 (764)
Q Consensus 674 ~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~ 753 (764)
+|.++ +-+|+.+..++.+|.+.|+++|+++|+++|++++||+||+.+....+ +..+ .+|.+++++||+
T Consensus 156 ~i~~~------t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~-----~~~~-~~d~~~~s~~K~ 223 (401)
T PRK10874 156 LITPR------TRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPAD-----VQAL-DIDFYAFSGHKL 223 (401)
T ss_pred hcCcC------cEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCC-----chhc-CCCEEEEecccc
Confidence 99654 44888899999999999999999999999999999999986544322 1222 369999999995
Q ss_pred CCCCcCceeeC
Q psy13453 754 LLVNFDCSAMW 764 (764)
Q Consensus 754 l~~P~~~g~l~ 764 (764)
+.|.|+|++|
T Consensus 224 -~gp~G~G~l~ 233 (401)
T PRK10874 224 -YGPTGIGVLY 233 (401)
T ss_pred -cCCCccEEEE
Confidence 5688999875
No 56
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.63 E-value=1.4e-14 Score=161.74 Aligned_cols=219 Identities=18% Similarity=0.140 Sum_probs=145.2
Q ss_pred HHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHHHHHHHHh-hcccCccccC--CchHHHHHHHHHHHHHHHcCCCcc
Q psy13453 504 HIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIVGDMLSGA-FGLIGFSWLS--SPACTELEVLVMNWLGKALGLPEE 580 (764)
Q Consensus 504 ~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~lad~l~~~-lN~n~~~~~~--sp~~t~lE~~v~~~la~llG~p~~ 580 (764)
+||.++...-......-.+-..++-...+...+.++.+..... ..+....|.. +....++..++.+++++++|.+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~ 82 (398)
T cd00613 3 EVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILENEFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVA 82 (398)
T ss_pred HHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccccCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCcc
Confidence 6777766632122111111133444444445555555544444 1111111211 456678889999999999998642
Q ss_pred ccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCC----CceE
Q psy13453 581 FLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGD----VPVR 656 (764)
Q Consensus 581 ~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lG----l~v~ 656 (764)
..+|+.+|+.+...++.+++... . ++..|++++..|.+...++..+| .+++
T Consensus 83 ---------~v~~~~~g~~~~~~~~~~~~~~~--~--------------~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~ 137 (398)
T cd00613 83 ---------NASLQDEATAAAEAAGLAAIRAY--H--------------KRNKVLVPDSAHPTNPAVARTRGEPLGIEVV 137 (398)
T ss_pred ---------ceeccCchHHHHHHHHHHHHhcc--c--------------CCCEEEEcCccCcchHHHHHHhcccCCcEEE
Confidence 35567756655455555444221 0 12257889999999999988877 8899
Q ss_pred EEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccH-HHHHHHHHhcCCEEEEeccccccccccchhhh
Q psy13453 657 QLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNL-EELGPICQEYNIWLHVDAAYAGSALLLPEYAH 735 (764)
Q Consensus 657 ~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl-~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~ 735 (764)
.+|+++++.+|+++|+++|.++ +.+|+++..+ .+|.++|+ ++|+++|++||+|+|||++++++..+.....
T Consensus 138 ~v~~~~~~~~d~~~l~~~i~~~------t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~- 209 (398)
T cd00613 138 EVPSDEGGTVDLEALKEEVSEE------VAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGE- 209 (398)
T ss_pred EeccCCCCCcCHHHHHHhcCCC------eEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHH-
Confidence 9999888899999999988543 4477777776 57999885 9999999999999999999876544332211
Q ss_pred hhcCCCcccEEEEcCCccCCCCcCce
Q psy13453 736 LKRGLEYVDSFDFNTHKWLLVNFDCS 761 (764)
Q Consensus 736 ~l~gie~aDSit~d~HK~l~~P~~~g 761 (764)
..+|+++.++|||+ .|+++|
T Consensus 210 -----~~~d~~~~s~~K~~-~p~g~G 229 (398)
T cd00613 210 -----YGADIVVGNLQKTG-VPHGGG 229 (398)
T ss_pred -----cCCCEEEeeccccC-CCCCCC
Confidence 14699999999999 887654
No 57
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.62 E-value=9.2e-15 Score=175.65 Aligned_cols=233 Identities=9% Similarity=-0.031 Sum_probs=172.8
Q ss_pred ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccC-chhh
Q psy13453 11 AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQS-LNAP 88 (764)
Q Consensus 11 ~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDp-i~~i 88 (764)
.++|++ .|.+..++|+..|+.. +.||+|++|++|+++|+++|++. |..+.+ +.|.|+| +|.++| |.+|
T Consensus 581 vlip~s---aHgtnPasa~~~G~~V---v~V~~d~~G~iDle~L~~~i~~~---~~~taaV~iT~pst-~G~~e~~I~eI 650 (939)
T TIGR00461 581 CLIPVS---AHGTNPASAAMAGMQV---VPVNCDQDGNIDLVDLKNKAEQH---GDELAAVMVTYPST-HGVFEPTIQHA 650 (939)
T ss_pred EEEEcc---ccCcCHHHHHHCCCEE---EEeccCCCCCcCHHHHHHHHhhc---CCceEEEEEEeCCc-CceecccHHHH
Confidence 778888 8999999999999976 99999999999999999999862 224556 6999999 799988 9998
Q ss_pred hc-----CCCceecccc---------------------ccc-----------cceeeeecCCCccccccccc-----ccc
Q psy13453 89 VS-----NGPLKVGGVL---------------------RRV-----------YSSCLVPRGQKSLRTTVLFH-----FLF 126 (764)
Q Consensus 89 a~-----~~wlHVDa~l---------------------~~~-----------y~s~ll~rd~~~l~~~~s~~-----~d~ 126 (764)
++ +.|+||||+- .|+ +.+++.+|+. +...+... .|.
T Consensus 651 ~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~--L~~~lPg~~v~~t~d~ 728 (939)
T TIGR00461 651 CDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH--LIPFLPKHDVVSMITG 728 (939)
T ss_pred HHHHHHcCCEEEEEecChhhCCCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh--chhhcCCCcccccccC
Confidence 86 6899999941 111 1145666642 11111100 111
Q ss_pred --C--CcccCCCCcccH----HHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC----CceeEEEEee
Q psy13453 127 --Q--HWQIPLGRRFRA----LKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP----SMGLVCFRLK 194 (764)
Q Consensus 127 --~--d~tle~SRr~~A----LklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P----~l~iV~Fry~ 194 (764)
. +.+...++.+++ ++.|+.|+.+|.+|+++..+.++.+|+|++++|++ +++++.+. -..-++|++.
T Consensus 729 ~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~ 806 (939)
T TIGR00461 729 IGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLR 806 (939)
T ss_pred CCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEecc
Confidence 0 112223344444 79999999999999999999999999999999997 66877763 3455888886
Q ss_pred ccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEec-eeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 195 VRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKG-SFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 195 P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t-~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
|.. ++.+..+..+.++|.+.|....+.+ .+.+...+++|- .+++++||+|++.+.++++++.+
T Consensus 807 ~~~------------~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE---~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 807 PLK------------AKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTE---SESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred chh------------hhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeec---cCCHHHHHHHHHHHHHHHHHHHH
Confidence 521 1334457889999999999766544 455666777654 77899999999999999988866
No 58
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.62 E-value=1e-14 Score=161.21 Aligned_cols=165 Identities=13% Similarity=0.117 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS 643 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S 643 (764)
-+++.+.+++++|.+ ..++|+|+|+++..++.+.. . +...|+++..+|++
T Consensus 46 ~~~l~~~la~~~g~~-----------~i~~~~g~t~al~~~l~~~~----~---------------~gd~Vl~~~~~~~~ 95 (361)
T cd06452 46 IKDFHHDLAEFLGMD-----------EARVTPGAREGKFAVMHSLC----E---------------KGDWVVVDGLAHYT 95 (361)
T ss_pred HHHHHHHHHHHcCCc-----------eEEEeCCHHHHHHHHHHHhc----C---------------CCCEEEEcCCcchH
Confidence 344556788888872 36899999999887776431 1 12257788999999
Q ss_pred HHHHHHhCCCceEEEecCCCC--cccHHHHHHHHHHhhhc-CCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEe
Q psy13453 644 VEKSAIIGDVPVRQLRSDDNG--VLRGDALLTAVKEDLAK-GLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVD 720 (764)
Q Consensus 644 v~kAa~~lGl~v~~Vp~d~~g--~md~~~Le~~I~~~~~~-G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVD 720 (764)
...+++..|++++.||++.++ .+|+++|++++++..++ +..+-+|+++..++.+|.++|+++|+++|+++|+++|||
T Consensus 96 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD 175 (361)
T cd06452 96 SYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLN 175 (361)
T ss_pred HHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEE
Confidence 999999999999999998654 99999999999754322 234668888999999999999999999999999999999
Q ss_pred ccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 721 AAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 721 aA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+||+.+....+-. .. .+|.++.++||+++.|.++|+++
T Consensus 176 ~a~~~g~~~~~~~-----~~-~~d~~~~s~~K~l~~~~~~G~l~ 213 (361)
T cd06452 176 GAYTVGRMPVSGK-----EL-GADFIVGSGHKSMAASAPIGVLA 213 (361)
T ss_pred CCcccCCcCCCHH-----Hc-CCCEEEecCCccccCCCCeEEEE
Confidence 9998654322211 11 35999999999999998888764
No 59
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.61 E-value=1.7e-14 Score=162.98 Aligned_cols=205 Identities=12% Similarity=0.012 Sum_probs=147.7
Q ss_pred CccccccCCCCChHHHHHHHHHHhhc---cc--CccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCCh
Q psy13453 523 PQFNAYFPTGSSYPSIVGDMLSGAFG---LI--GFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTA 597 (764)
Q Consensus 523 P~~~~~~~~~~~~~~~lad~l~~~lN---~n--~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGg 597 (764)
..||++-.+++.+..++ +.+..++. .+ ...+..+.....+..++++.+++++|.++. ...+||+|+
T Consensus 33 ~iyLd~a~~~~~p~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~--------~~v~~t~g~ 103 (424)
T PLN02855 33 LVYLDNAATSQKPAAVL-DALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTS--------REIVFTRNA 103 (424)
T ss_pred eEEeeCccccCCCHHHH-HHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCC--------CEEEEeCCH
Confidence 57899977766555544 33444332 12 122223444556667889999999998531 358999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH----HHHHHhCCCceEEEecCCCCcccHHHHHH
Q psy13453 598 SEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV----EKSAIIGDVPVRQLRSDDNGVLRGDALLT 673 (764)
Q Consensus 598 TeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv----~kAa~~lGl~v~~Vp~d~~g~md~~~Le~ 673 (764)
|+++...+........ .++..|+++..+|.|. ...++..|+.++.||++.++.+|+++|++
T Consensus 104 t~al~~i~~~~~~~~~---------------~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~ 168 (424)
T PLN02855 104 TEAINLVAYTWGLANL---------------KPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKE 168 (424)
T ss_pred HHHHHHHHHHhhhhcC---------------CCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHH
Confidence 9997665542110000 1123588888988874 44456789999999998888899999999
Q ss_pred HHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCcc
Q psy13453 674 AVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKW 753 (764)
Q Consensus 674 ~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~ 753 (764)
.|.+. +-+|+.+..++.+|.+.|+++|+++|+++|++++||+||+.+....+ ++.+ .+|.++.++||+
T Consensus 169 ~i~~~------t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~-----~~~~-~~d~~~~s~~K~ 236 (424)
T PLN02855 169 LLSEK------TKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVD-----VQTL-GADFLVASSHKM 236 (424)
T ss_pred HhccC------ceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCC-----chhc-CCCEEEeecccc
Confidence 99653 44888999999999999999999999999999999999976544322 2222 369999999995
Q ss_pred CCCCcCceeeC
Q psy13453 754 LLVNFDCSAMW 764 (764)
Q Consensus 754 l~~P~~~g~l~ 764 (764)
+.|.|+|++|
T Consensus 237 -~gp~G~G~l~ 246 (424)
T PLN02855 237 -CGPTGIGFLW 246 (424)
T ss_pred -cCCCccEEEE
Confidence 5699999885
No 60
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.61 E-value=5.3e-15 Score=179.62 Aligned_cols=168 Identities=17% Similarity=0.134 Sum_probs=135.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChH----HHHHHHHHHHHHHHhhhhccCCCCCccccccCceEE
Q psy13453 559 ACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTAS----EATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVA 634 (764)
Q Consensus 559 ~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgT----eANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi 634 (764)
...++-.++.+|+++++|++ ..+||+++| +++++++...... + + ...+-+|
T Consensus 565 g~~~~~~~~r~~la~i~g~~-----------~v~f~pnaga~ge~a~~~vi~~~~~~---~-G----------d~~r~~v 619 (993)
T PLN02414 565 GYQEMFEDLGDLLCEITGFD-----------SFSLQPNAGAAGEYAGLMVIRAYHLS---R-G----------DHHRNVC 619 (993)
T ss_pred HHHHHHHHHHHHHHHHhCCC-----------eEEEcCCCcHHHHHHHHHHHHHHHhc---c-C----------CCCCCEE
Confidence 34567788999999999994 368999998 7887777655211 0 1 1124478
Q ss_pred EecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcC
Q psy13453 635 YTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYN 714 (764)
Q Consensus 635 ~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~g 714 (764)
++|..+|.|+.+++...|++++.||+|++|.+|+++|+++|++.++ .+.+|++|.+||..|..+||++|+++|+++|
T Consensus 620 li~~~aH~sn~a~a~~~G~~vv~v~~d~~G~vDle~L~~~i~~~~~---~ta~V~vt~pSn~gg~e~~I~eI~~iah~~G 696 (993)
T PLN02414 620 IIPVSAHGTNPASAAMCGMKIVVVGTDAKGNINIEELRKAAEAHKD---NLAALMVTYPSTHGVYEEGIDEICDIIHDNG 696 (993)
T ss_pred EeCCCcCccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhccCC---CeEEEEEECCCccccccchHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999975321 2569999999999999999999999999999
Q ss_pred CEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC
Q psy13453 715 IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 715 lwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~ 759 (764)
..++||||+..+...... .+--.||.+.++.|||++.|.|
T Consensus 697 alv~vDgAq~~a~~~l~~-----p~~~GaD~~~~s~HK~f~~P~G 736 (993)
T PLN02414 697 GQVYMDGANMNAQVGLTS-----PGFIGADVCHLNLHKTFCIPHG 736 (993)
T ss_pred CEEEEEecCHHhccCcCC-----ccccCCCEEEecCCccCCcCcc
Confidence 999999999765522211 0112469999999999999997
No 61
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.61 E-value=1.1e-14 Score=156.94 Aligned_cols=166 Identities=16% Similarity=0.035 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
+-.++.+.+++++|.+.. -++|+|+|++|..++.+... +...|+++..+|.
T Consensus 60 ~i~~~~~~~A~~~ga~~~----------~~~~~Gst~a~~~~l~al~~-------------------~gd~Vlv~~~~h~ 110 (294)
T cd00615 60 PIKEAQELAARAFGAKHT----------FFLVNGTSSSNKAVILAVCG-------------------PGDKILIDRNCHK 110 (294)
T ss_pred HHHHHHHHHHHHhCCCCE----------EEEcCcHHHHHHHHHHHcCC-------------------CCCEEEEeCCchH
Confidence 445666788889987542 34589999999887764311 1235888999999
Q ss_pred hHHHHHHhCCCceEEEecCCC------CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCE
Q psy13453 643 SVEKSAIIGDVPVRQLRSDDN------GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIW 716 (764)
Q Consensus 643 Sv~kAa~~lGl~v~~Vp~d~~------g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glw 716 (764)
|+..++...|..++.++++.+ +.+|+++|++++++.. .+-+|+.|.. |.+|.+.|+++|+++|+++|++
T Consensus 111 s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~----~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~ 185 (294)
T cd00615 111 SVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHP----DAKAAVITNP-TYYGICYNLRKIVEEAHHRGLP 185 (294)
T ss_pred HHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCC----CceEEEEECC-CCCCEecCHHHHHHHHHhcCCe
Confidence 999999999999888887532 4799999999997632 2557777776 5799999999999999999999
Q ss_pred EEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 717 LHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 717 LHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
++||+||++.+.+.+........ ..+|.++.++||+++.|.++|++
T Consensus 186 livDeA~~~~~~~~~~~~~~~~~-~~~div~~S~hK~l~g~~~~~~l 231 (294)
T cd00615 186 VLVDEAHGAHFRFHPILPSSAAM-AGADIVVQSTHKTLPALTQGSMI 231 (294)
T ss_pred EEEECcchhhhccCcccCcchhh-cCCcEEEEchhcccchHhHHHHH
Confidence 99999999876555443322211 25799999999999888777654
No 62
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.60 E-value=3.1e-14 Score=170.22 Aligned_cols=237 Identities=13% Similarity=0.067 Sum_probs=167.5
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCCccccccCC-CCChHHHHHHHHHHhhcccCccc-cCCchHHHHHHHHHHHHHHHc
Q psy13453 498 EGEDWRHIMRDMNTVIMPGITHWQSPQFNAYFPT-GSSYPSIVGDMLSGAFGLIGFSW-LSSPACTELEVLVMNWLGKAL 575 (764)
Q Consensus 498 ~g~~~~~il~~l~~~i~~~~~~~~~P~~~~~~~~-~~~~~~~lad~l~~~lN~n~~~~-~~sp~~t~lE~~v~~~la~ll 575 (764)
.+.+--+++..+++.-..+..-..+..|+|--+- -..+...+-.....+++...+.. +.+...-++-.+.-+|+++++
T Consensus 477 ~~~SE~el~r~~~~La~kn~~~~~~~~~LGsCTmK~n~~~~~~p~s~~eF~t~hPyqp~e~sQG~lq~i~elq~~l~eLt 556 (954)
T PRK12566 477 AHHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATSEMIPITWPEFAQLHPFAPREQAEGYRAMIDELEAWLCAIT 556 (954)
T ss_pred cCCCHHHHHHHHHHHHhcCcCcccCcccCcccccCcCcHHhhhcccchhhhcCCCCCchhhhcCHHHHHHHHHHHHHHHH
Confidence 4678889999998876555432333344443100 01111111112222333333333 456677777777889999999
Q ss_pred CCCccccCCCCCCCcEEEeC-ChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCc
Q psy13453 576 GLPEEFLNCSPGPGGGIIQS-TASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVP 654 (764)
Q Consensus 576 G~p~~~~~~~~~~~~GvfTs-GgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~ 654 (764)
|++. ..+.+ +|+++++.++++.|.....+ + ...+-+|++|..+|.+...++...|++
T Consensus 557 Gmd~-----------~Sl~p~sGA~gE~A~Lmair~yh~~~-G----------e~~r~~vLIp~saHgtNpasa~~~Gie 614 (954)
T PRK12566 557 GFDA-----------ICMQPNSGAQGEYAGLLAIRRYHRSR-G----------QSQRDICLIPSSAHGTNPASAQMAGMR 614 (954)
T ss_pred CCCe-----------EeecCCchHHHHHHHHHHHHHHHHhc-C----------CCCCCEEEecccccccCHHHHHHCCCE
Confidence 9975 24555 78899999988877644322 1 112446889999998888888889999
Q ss_pred eEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhh
Q psy13453 655 VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYA 734 (764)
Q Consensus 655 v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r 734 (764)
++.||+|++|.+|+++|+++|++.. ....+|+.|.+++..+..+|+++|+++|+++|.+++||||+..+......-
T Consensus 615 Vv~Vp~D~~G~iDle~L~a~I~~~~---~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~P- 690 (954)
T PRK12566 615 VVIVECDPDGNVDLDDLKAKAAAAG---DRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARP- 690 (954)
T ss_pred EEEeccCCCCCcCHHHHHHHhhccC---CCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCCh-
Confidence 9999999999999999999997422 236688999999988777889999999999999999999987544333211
Q ss_pred hhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 735 HLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 735 ~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
|--.||.++.++|||++.|.+.|..|
T Consensus 691 ----g~~GADi~~~s~HKtf~~P~G~GGP~ 716 (954)
T PRK12566 691 ----ADIGADVSHMNLHKTFCIPHGGGGPG 716 (954)
T ss_pred ----hhcCCCEEEecCCcccCcCccCCCCc
Confidence 11257999999999999999999754
No 63
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.58 E-value=4.6e-14 Score=156.04 Aligned_cols=218 Identities=13% Similarity=0.156 Sum_probs=159.6
Q ss_pred ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc
Q psy13453 11 AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS 90 (764)
Q Consensus 11 ~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~ 90 (764)
...++. .|||+.++++.+|+.. +.||+++++++|+++|+++|+++ +..+|.+.|++++|.++|++++++
T Consensus 109 vl~~~~---~h~~~~~~~~~~G~~~---~~v~~~~~~~~d~~~l~~~l~~~-----~~~vv~~~~~~~tG~~~~~~~i~~ 177 (373)
T TIGR03812 109 IIVPES---AHFSFEKAAEMLGLEL---RYAPLDEDYTVDVKDVEDLIDDN-----TIGIVGIAGTTELGQIDDIEELSK 177 (373)
T ss_pred EEECCc---chHHHHHHHHHcCCeE---EEEeeCCCCCcCHHHHHHHHhhC-----cEEEEEECCCCCCCccCCHHHHHH
Confidence 555665 7999999999999976 99999999999999999999764 234466678999999999999887
Q ss_pred -----CCCceeccccc------------------------------ccc------ceeeeecCCCcccccccc--ccc--
Q psy13453 91 -----NGPLKVGGVLR------------------------------RVY------SSCLVPRGQKSLRTTVLF--HFL-- 125 (764)
Q Consensus 91 -----~~wlHVDa~l~------------------------------~~y------~s~ll~rd~~~l~~~~s~--~~d-- 125 (764)
++|+|||++.. +++ ++++++++++.+.. +.. .+.
T Consensus 178 l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~-l~~~~~~~~~ 256 (373)
T TIGR03812 178 IALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLKY-LSVDAPYLTV 256 (373)
T ss_pred HHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHhh-hcccCcccCC
Confidence 88999999641 011 01222222211110 000 000
Q ss_pred cCCcccCCCC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeecccccccccc
Q psy13453 126 FQHWQIPLGR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNL 204 (764)
Q Consensus 126 ~~d~tle~SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~ 204 (764)
...++..|+| ....+.+|++++.++++|+.++.++..++++++++.|++. +++.+.+|..++|+|+..
T Consensus 257 ~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~---------- 325 (373)
T TIGR03812 257 KKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI-GFEPVIEPVLNIVAFEVD---------- 325 (373)
T ss_pred CCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCCceEEEEEeC----------
Confidence 1122344677 4667789999999999999999999999999999999997 576666788999999753
Q ss_pred ccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHH
Q psy13453 205 FGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRT 265 (764)
Q Consensus 205 ~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~ 265 (764)
+ ...+.++|.++|+.. +.. .++.++|+++. +++++++++.+++.|++
T Consensus 326 ------~----~~~v~~~L~~~gi~v-~~~--~~~~~iRis~~-~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 326 ------D----PEEVRKKLRDRGWYV-SVT--RCPKALRIVVM-PHVTREHIEEFLEDLKE 372 (373)
T ss_pred ------C----HHHHHHHHHHCCcee-ccC--CCCCEEEEEEE-CCCCHHHHHHHHHHHhh
Confidence 1 136888888888653 222 34568999765 56889999999999875
No 64
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.57 E-value=3e-14 Score=137.97 Aligned_cols=163 Identities=21% Similarity=0.110 Sum_probs=125.2
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
.++.++++++++.+. ...+|++|||+|+..++.+++.. +..|+++...|.+.
T Consensus 3 ~~~~~~l~~~~~~~~---------~~~~~~~~~t~a~~~~~~~~~~~-------------------~~~v~~~~~~~~~~ 54 (170)
T cd01494 3 EELEEKLARLLQPGN---------DKAVFVPSGTGANEAALLALLGP-------------------GDEVIVDANGHGSR 54 (170)
T ss_pred HHHHHHHHHHcCCCC---------CcEEEeCCcHHHHHHHHHHhCCC-------------------CCEEEEeeccccee
Confidence 356788999996322 35889999999999888876321 12478888899888
Q ss_pred H-HHHHhCCCceEEEecCCCCcccHH--HHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEec
Q psy13453 645 E-KSAIIGDVPVRQLRSDDNGVLRGD--ALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDA 721 (764)
Q Consensus 645 ~-kAa~~lGl~v~~Vp~d~~g~md~~--~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDa 721 (764)
. ..+...|.+++.++.+.++..+.+ .+++. ..+..|.+|+.+..++.+|..+|+++|+++|+++|+|+|+|+
T Consensus 55 ~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~ 129 (170)
T cd01494 55 YWVAAELAGAKPVPVPVDDAGYGGLDVAILEEL-----KAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDA 129 (170)
T ss_pred hhhHHHhcCCEEEEeccCCCCccchhhhhhhhc-----cccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEec
Confidence 8 888889999999998766544433 33322 224468899999999999999999999999999999999999
Q ss_pred cccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 722 AYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 722 A~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
||+++....+..... ...+|.++.++|||++. .++|+++
T Consensus 130 a~~~~~~~~~~~~~~---~~~~d~~~~s~~K~~~~-~~~G~l~ 168 (170)
T cd01494 130 ASAGGASPAPGVLIP---EGGADVVTFSLHKNLGG-EGGGVVI 168 (170)
T ss_pred ccccccccccccccc---cccCCEEEEEcccccCC-CceEEEE
Confidence 999877655331111 23579999999999998 7888874
No 65
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.56 E-value=7.2e-14 Score=157.12 Aligned_cols=205 Identities=12% Similarity=0.051 Sum_probs=140.5
Q ss_pred CCCccccccCCCCChHHHHHHHHHHhh----cccCccccCC-chHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeC
Q psy13453 521 QSPQFNAYFPTGSSYPSIVGDMLSGAF----GLIGFSWLSS-PACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQS 595 (764)
Q Consensus 521 ~~P~~~~~~~~~~~~~~~lad~l~~~l----N~n~~~~~~s-p~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTs 595 (764)
.+..||++-..++. +..+.+.+..++ +.....+..+ .....++.+. +.+ +++|.++ ...+||+
T Consensus 26 ~~~iyld~~a~g~~-p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~g~~~---------~~v~~~~ 93 (406)
T TIGR01814 26 NAVIYLDGNSLGLM-PKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESL-LKL-RLVGAKE---------DEVVVMN 93 (406)
T ss_pred CCcEEecCCCcCcC-cHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhh-ccc-cccCCCC---------CcEEEeC
Confidence 34578887766655 444444444333 2222233222 2223334333 334 7888865 3579999
Q ss_pred ChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHH----HHHhCCCce----EEEecCCCCccc
Q psy13453 596 TASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEK----SAIIGDVPV----RQLRSDDNGVLR 667 (764)
Q Consensus 596 GgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~k----Aa~~lGl~v----~~Vp~d~~g~md 667 (764)
|+|+++..++... ..+. .++.+|+++..+|.|+.. .++..|+.+ +.++.+.+|.+|
T Consensus 94 ~~t~~l~~~~~~~---~~~~-------------~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~ 157 (406)
T TIGR01814 94 TLTINLHLLLASF---YKPT-------------PKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLR 157 (406)
T ss_pred CchHHHHHHHHHh---cCCc-------------CCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccC
Confidence 9999877665432 1010 012367889999988544 345668876 567777788999
Q ss_pred HHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEE
Q psy13453 668 GDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFD 747 (764)
Q Consensus 668 ~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit 747 (764)
++++++.++.. +..+.+|+.+..++.+|.+.|+++|+++|+++|++++||++++.+.+..+- +.+ .+|.++
T Consensus 158 ~~~l~~~~~~~---~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~-----~~~-gvD~~~ 228 (406)
T TIGR01814 158 LEDILDTIEKN---GDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDL-----HDW-GVDFAC 228 (406)
T ss_pred HHHHHHHHHhc---CCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCccccc-----ccC-CCCEEE
Confidence 99999998643 224568999999999999999999999999999999999999998775531 111 359999
Q ss_pred EcCCccCCCCcCceee
Q psy13453 748 FNTHKWLLVNFDCSAM 763 (764)
Q Consensus 748 ~d~HK~l~~P~~~g~l 763 (764)
+++||||+.|.| |.+
T Consensus 229 ~s~hK~l~g~pG-~~l 243 (406)
T TIGR01814 229 WCTYKYLNAGPG-AGA 243 (406)
T ss_pred EcCccccCCCCC-eEE
Confidence 999999987778 444
No 66
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.56 E-value=7.3e-14 Score=154.33 Aligned_cols=172 Identities=11% Similarity=-0.002 Sum_probs=133.5
Q ss_pred chHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEec
Q psy13453 558 PACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTS 637 (764)
Q Consensus 558 p~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S 637 (764)
+....+-+++.+.+++++|.++++ ...+||+|||+++..++..... + ++-+++++
T Consensus 31 ~~~~~~~~~~r~~la~l~~~~~~~-------~~i~~t~~~t~al~~~~~~l~~---~---------------~~~vlv~~ 85 (363)
T TIGR02326 31 SDYNIVVEQIRQQLLALATAEEGY-------TSVLLQGSGTFAVEAVIGSAVP---K---------------DGKLLVVI 85 (363)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCc-------eEEEEcCCCHHHHHHHHHhcCC---C---------------CCeEEEEe
Confidence 456667778999999999997521 2478999999998777653310 0 12356666
Q ss_pred CCcchh-HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCE
Q psy13453 638 DQSNSS-VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIW 716 (764)
Q Consensus 638 ~~aH~S-v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glw 716 (764)
...|.+ +.+.++..|++++.||+++++.+|+++|+++++++.+ +-+|+.+..+|.+|.+.|+++|+++|++||++
T Consensus 86 ~~~~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~----~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~ 161 (363)
T TIGR02326 86 NGAYGARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPA----ITHIALVHCETTTGILNPIEAVAKLAHRHGKV 161 (363)
T ss_pred CChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCC----ccEEEEEeecCCccccCcHHHHHHHHHHcCCE
Confidence 666666 4677888999999999998899999999999876421 23677788899999999999999999999999
Q ss_pred EEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 717 LHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 717 LHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
++||++++.+....+ ++.+ .+|.+..++|||++.|.|.|++|
T Consensus 162 livD~~~~~g~~~~~-----~~~~-~~D~~~~s~~K~l~~p~G~G~l~ 203 (363)
T TIGR02326 162 TIVDAMSSFGGIPID-----IAEL-HIDYLISSANKCIQGVPGFGFVI 203 (363)
T ss_pred EEEEccccccCcccc-----hhhc-CccEEEecCccccccCCcceEEE
Confidence 999999876544332 2222 36999999999999999999875
No 67
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.56 E-value=1.2e-13 Score=155.37 Aligned_cols=197 Identities=15% Similarity=0.028 Sum_probs=145.8
Q ss_pred ccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHH
Q psy13453 528 YFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILV 607 (764)
Q Consensus 528 ~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~a 607 (764)
+.+++...+.-+-+.+...... ..++.+.++-+++.+++++++|.+.+ ...+++++||.++..++..
T Consensus 13 ~~pGP~~~~~~V~~a~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~g~~~~--------~~vi~~~~gt~a~~~a~~~ 79 (401)
T PLN02409 13 FVPGPVNIPERVLRAMNRPNED-----HRSPAFPALTKELLEDVKYIFKTKSG--------TPFIFPTTGTGAWESALTN 79 (401)
T ss_pred ccCCCCCCCHHHHHHhcCCCCC-----CCCHHHHHHHHHHHHHHHHHhCCCCC--------CEEEEeCCcHHHHHHHHHh
Confidence 4455555544444444433322 23778888999999999999998653 2568999999887666542
Q ss_pred HHHHHhhhhccCCCCCccccccCceEEEecCCcchhH--HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCc
Q psy13453 608 AKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV--EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIP 685 (764)
Q Consensus 608 AR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv--~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p 685 (764)
. .. ++-.|++++..|++. ...++..|++++.|+.+.++.+|+++|+++++++.. ..+
T Consensus 80 ~----~~---------------~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~--~~~ 138 (401)
T PLN02409 80 T----LS---------------PGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTN--HKI 138 (401)
T ss_pred c----CC---------------CCCEEEEeCCCchhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcC--CCc
Confidence 1 11 122466777888765 466778899999999987667999999999986421 135
Q ss_pred eEEEEeeccCCccccccHHHHHHH--HHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 686 CCLIATLGTTGTCAFDNLEELGPI--CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 686 ~~VvataGTT~~GaiDpl~eIa~i--~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
-+|+.+..+|.+|.+-|+++|+++ |+++|++++||++++.+....+ ++.+ .+|.++.+.|||++.|.|+|++
T Consensus 139 k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id-----~~~~-~~D~~~~s~~K~l~~P~G~G~l 212 (401)
T PLN02409 139 KAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFR-----MDEW-GVDVALTGSQKALSLPTGLGIV 212 (401)
T ss_pred cEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCcccc-----cccc-CccEEEEcCccccCcCCCccee
Confidence 588889999999999999999999 9999999999999986544332 1111 3599999999999999999988
Q ss_pred C
Q psy13453 764 W 764 (764)
Q Consensus 764 ~ 764 (764)
|
T Consensus 213 ~ 213 (401)
T PLN02409 213 C 213 (401)
T ss_pred E
Confidence 5
No 68
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.55 E-value=1e-13 Score=168.45 Aligned_cols=210 Identities=10% Similarity=-0.113 Sum_probs=147.3
Q ss_pred CccccccCCCCChHHHHHHHHHHhh-----cccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCCh
Q psy13453 523 PQFNAYFPTGSSYPSIVGDMLSGAF-----GLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTA 597 (764)
Q Consensus 523 P~~~~~~~~~~~~~~~lad~l~~~l-----N~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGg 597 (764)
-.||+|-.+++..+..+.+.+..++ |.+ ..+..+..++.+-+++.+.+++++|.++. ....+||+|+
T Consensus 35 ~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~-s~~~~s~~~~~~~e~aR~~ia~~lga~~~-------~~~VvFtsna 106 (805)
T PLN02724 35 VVYLDHAGATLYSESQLEAALADFSSNVYGNPH-SQSDSSMRSSDTIESARQQVLEYFNAPPS-------DYACVFTSGA 106 (805)
T ss_pred CEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCC-cCcchhhhHHHHHHHHHHHHHHHhCCCcc-------ceEEEEeCCh
Confidence 4699998777655555555544332 333 34455677788888999999999998653 1246999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHH---HhCCCceEEEecC--------CCCcc
Q psy13453 598 SEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSA---IIGDVPVRQLRSD--------DNGVL 666 (764)
Q Consensus 598 TeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa---~~lGl~v~~Vp~d--------~~g~m 666 (764)
|+|+.+..... +. .++-.|+++...|.|+.-.. ...|+.++.||++ +.+.+
T Consensus 107 T~alnlva~~l-----~~-------------~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~ 168 (805)
T PLN02724 107 TAALKLVGETF-----PW-------------SSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSV 168 (805)
T ss_pred HHHHHHHHHHC-----CC-------------CCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhcccccccccccc
Confidence 99966543321 10 01225777999998876433 3358899999887 45666
Q ss_pred cH--HHHHHHHHH----hhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc-------C-CEEEEeccccccccccch
Q psy13453 667 RG--DALLTAVKE----DLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY-------N-IWLHVDAAYAGSALLLPE 732 (764)
Q Consensus 667 d~--~~Le~~I~~----~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~-------g-lwLHVDaA~Gg~~l~~~~ 732 (764)
++ ++|++.+.+ ....+..+-+|+.++.++.+|.+.||++|..+++.. | +++|||||++.+....+-
T Consensus 169 ~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv 248 (805)
T PLN02724 169 VVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDL 248 (805)
T ss_pred ccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCCh
Confidence 55 667776531 111123446999999999999999999886666542 3 569999999998776542
Q ss_pred hhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 733 YAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 733 ~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
..+ .+|.+++++|||++.|.|+|+||
T Consensus 249 -----~~~-~~Dfl~~S~HK~~GgP~G~G~L~ 274 (805)
T PLN02724 249 -----SRY-PADFVVVSFYKIFGYPTGLGALL 274 (805)
T ss_pred -----hhc-CCCEEEEecceeccCCCCceEEE
Confidence 222 46999999999999999999986
No 69
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.55 E-value=1.5e-13 Score=153.48 Aligned_cols=201 Identities=13% Similarity=0.087 Sum_probs=143.4
Q ss_pred ccccccCCCCChHHHHHHHHHHhhcc---c-CccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHH
Q psy13453 524 QFNAYFPTGSSYPSIVGDMLSGAFGL---I-GFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASE 599 (764)
Q Consensus 524 ~~~~~~~~~~~~~~~lad~l~~~lN~---n-~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTe 599 (764)
.||++-.+++.+..++..+. ..+.. + ...|..+.....+..++.+.+++++|.++. ..++++|+|+
T Consensus 19 ~yl~~~~~~~~p~~v~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~---------~v~~~~~~t~ 88 (397)
T TIGR01976 19 VFFDNPAGTQIPQSVADAVS-AALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPP---------EVVFGANATS 88 (397)
T ss_pred EEecCCccCCCCHHHHHHHH-HHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCC---------eEEEeCCHHH
Confidence 78888776666655543333 33221 1 122333444556778899999999998652 4789999999
Q ss_pred HHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH----HHHHhCCCceEEEecCC-CCcccHHHHHHH
Q psy13453 600 ATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE----KSAIIGDVPVRQLRSDD-NGVLRGDALLTA 674 (764)
Q Consensus 600 ANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~----kAa~~lGl~v~~Vp~d~-~g~md~~~Le~~ 674 (764)
++...+.+..... .++..|++++.+|+|.. +.++..|++++.++.++ ++.+|+++|+++
T Consensus 89 ~l~~~~~~~~~~~----------------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 152 (397)
T TIGR01976 89 LTFLLSRAISRRW----------------GPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASL 152 (397)
T ss_pred HHHHHHHHHHhcC----------------CCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHh
Confidence 8655444332111 11235778889998864 45677899999999985 789999999999
Q ss_pred HHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccC
Q psy13453 675 VKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWL 754 (764)
Q Consensus 675 I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l 754 (764)
|.+. +-+|+.+..++.+|.+.|+++|+++|++||++++||+|+..+....+ +... .+|.++.++|||+
T Consensus 153 i~~~------~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~-----~~~~-~~d~~~~s~~K~~ 220 (397)
T TIGR01976 153 LSPR------TRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLID-----VQAT-GADFLTCSAYKFF 220 (397)
T ss_pred cCCC------ceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCC-----HHHc-CCCEEEEechhhc
Confidence 8643 44888999999999999999999999999999999999875433221 1111 4699999999998
Q ss_pred CCCcCceeeC
Q psy13453 755 LVNFDCSAMW 764 (764)
Q Consensus 755 ~~P~~~g~l~ 764 (764)
+.+ +|+++
T Consensus 221 g~~--~G~l~ 228 (397)
T TIGR01976 221 GPH--MGILW 228 (397)
T ss_pred CCc--eEEEE
Confidence 743 67654
No 70
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.53 E-value=7.1e-14 Score=159.52 Aligned_cols=168 Identities=17% Similarity=0.120 Sum_probs=123.4
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEe---CChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQ---STASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfT---sGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
......+|+.+.+.++++||.+++ .-+|+ ++||++|+.++.+.. . ++..
T Consensus 75 ~~~~~~iE~~ar~~~a~lf~a~~~---------~~~~~~~~~sgt~an~~v~~al~----~---------------~gd~ 126 (452)
T PTZ00094 75 NEVVDKIENLCQKRALEAFGLDPE---------EWGVNVQPYSGSPANFAVYTALL----Q---------------PHDR 126 (452)
T ss_pred chHHHHHHHHHHHHHHHHhCCCcc---------cceeecCCCchHHHHHHHHHHhc----C---------------CCCE
Confidence 345577888899999999998653 22355 799999998776541 1 1235
Q ss_pred EEecCCcchhHHHHHHh----------CCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccH
Q psy13453 634 AYTSDQSNSSVEKSAII----------GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNL 703 (764)
Q Consensus 634 i~~S~~aH~Sv~kAa~~----------lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl 703 (764)
|++++..|-+....+.. .++.+..+++|.+|.+|+++|++.+++.+ |-+|++ +.+++|.+.|+
T Consensus 127 Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~-----~~lvi~--~~s~~g~~~di 199 (452)
T PTZ00094 127 IMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFR-----PKLIIA--GASAYPRDIDY 199 (452)
T ss_pred EEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhC-----CCEEEE--eCCCCCCccCH
Confidence 78889999776544321 11344566678789999999999997531 334443 34569999999
Q ss_pred HHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 704 EELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 704 ~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
++|+++|+++|+++|||+||+.+.+...-+.. .+..+|.+++++|||++.|.| |++
T Consensus 200 ~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~---~~~~~D~l~~S~hK~l~GP~G-g~l 255 (452)
T PTZ00094 200 KRFREICDSVGAYLMADIAHTSGLVAAGVLPS---PFPYADVVTTTTHKSLRGPRS-GLI 255 (452)
T ss_pred HHHHHHHHHcCCEEEEeccchhccccCCCCCC---CCCCCcEEEcCCccCCCCCCc-eEE
Confidence 99999999999999999999998876532221 123579999999999999998 544
No 71
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.52 E-value=3.1e-13 Score=164.88 Aligned_cols=235 Identities=10% Similarity=-0.033 Sum_probs=160.9
Q ss_pred ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCchhhh
Q psy13453 11 AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLNAPV 89 (764)
Q Consensus 11 ~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~~ia 89 (764)
.+.|++ .|+|+.++++++|+.. +.||+|++|++|+++|+++|+++. ..+.+ +.|.|+|..+..|||.+|+
T Consensus 593 vlis~~---aH~snp~sa~~~G~~v---v~v~~d~~G~iD~~~L~~~i~~~~---~~la~V~it~pst~G~~e~~I~eI~ 663 (954)
T PRK05367 593 CLIPSS---AHGTNPASAVMAGMKV---VVVACDENGNIDLDDLRAKAEEHA---DNLAAIMITYPSTHGVFEETIREIC 663 (954)
T ss_pred EEEEch---hhhhhHHHHHHCCCEE---EEECCCCCCCcCHHHHHHHHhccC---CCeEEEEEEcCCCCeeecCCHHHHH
Confidence 677777 8999999999999976 999999999999999999998631 13555 6999999844569999998
Q ss_pred c-----CCCceeccccc---------------------cc-----c------ceeeeecCCCccccccccc-----cccC
Q psy13453 90 S-----NGPLKVGGVLR---------------------RV-----Y------SSCLVPRGQKSLRTTVLFH-----FLFQ 127 (764)
Q Consensus 90 ~-----~~wlHVDa~l~---------------------~~-----y------~s~ll~rd~~~l~~~~s~~-----~d~~ 127 (764)
+ ++|+||||+.. |+ + ++++.+|+. +...+... .+-.
T Consensus 664 ~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~--l~p~lpg~~v~~~~~~~ 741 (954)
T PRK05367 664 EIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH--LAPFLPGHPVQIAGGET 741 (954)
T ss_pred HHHHHcCCEEEEECcChhhccCCCChhhcCCCEEEecCcccCCCCcCCCCCceEEEeeccc--ccccCCCCccCcCCCCC
Confidence 7 89999999531 11 1 123444421 11100000 0000
Q ss_pred CcccCCCCcc----cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeC--C--CCceeEEEEeeccccc
Q psy13453 128 HWQIPLGRRF----RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVC--P--PSMGLVCFRLKVRFWD 199 (764)
Q Consensus 128 d~tle~SRr~----~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~--~--P~l~iV~Fry~P~~~~ 199 (764)
..+..++... .+++.|+.++.+|.+|++++++.++.+|+|++++|++. +++.. + +...-++|++.+-.
T Consensus 742 ~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~--~~~~~~~~~~~~~~e~i~~~~~~~-- 817 (954)
T PRK05367 742 GIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH--YPVLYTGANGRVAHECILDLRPLK-- 817 (954)
T ss_pred CcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh--cCccccCCCCCcccceEEEeeccc--
Confidence 1122222222 34568999999999999999999999999999999874 44422 2 33444666664310
Q ss_pred cccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 200 KLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 200 ~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
...+..+..+.++|.+.|....+.. +.....++++++- .++++++|.|++.++.+.+++.+
T Consensus 818 ----------~~~g~~~~di~krL~d~G~~~~t~~-~pv~~~l~i~ptE-~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 818 ----------ESTGITVDDIAKRLIDYGFHAPTMS-FPVAGTLMVEPTE-SESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred ----------ccCCCCHHHHHHHHHHCCCeEeecC-CccCCEEEEEeee-cCCHHHHHHHHHHHHHHHHHHHH
Confidence 0111224679999999998665522 2223457776665 66899999999999999988866
No 72
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.52 E-value=2e-13 Score=146.74 Aligned_cols=177 Identities=18% Similarity=0.179 Sum_probs=129.0
Q ss_pred hcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccc
Q psy13453 547 FGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTEN 626 (764)
Q Consensus 547 lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~ 626 (764)
.|.....|..++.+.++|+ .++++||.+. .+|+++||+||.+++.+...+
T Consensus 18 a~~gd~~Yg~D~~~~~l~~----~i~~l~g~e~-----------a~f~~sGT~An~~al~~~~~~--------------- 67 (290)
T PF01212_consen 18 ANVGDDAYGEDPTTARLEE----RIAELFGKEA-----------ALFVPSGTMANQLALRAHLRP--------------- 67 (290)
T ss_dssp TTSB-CCTTSSHHHHHHHH----HHHHHHTSSE-----------EEEESSHHHHHHHHHHHHHHT---------------
T ss_pred cccCCcccCCChhHHHHHH----HHHHHcCCCE-----------EEEeCCCChHHHHHHHHHHhc---------------
Confidence 3443446888888888887 5677888864 579999999999999876521
Q ss_pred cccCceEEEecCCcchhHHHHH---HhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCc-ccc--
Q psy13453 627 DIRNKLVAYTSDQSNSSVEKSA---IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGT-CAF-- 700 (764)
Q Consensus 627 ~~~~~~vi~~S~~aH~Sv~kAa---~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~-Gai-- 700 (764)
.-.|++.+.+|..+.... .+.|.+++.|+.+++|+||+++|++.+.+.......|-+|.++..|... |.+
T Consensus 68 ----~~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s 143 (290)
T PF01212_consen 68 ----GESVICADTAHIHFDETGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYS 143 (290)
T ss_dssp ----TEEEEEETTEHHHHSSTTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---
T ss_pred ----CCceeccccceeeeeccchhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCC
Confidence 225889999999887663 3489999999988779999999999998864422345666666665543 544
Q ss_pred -ccHHHHHHHHHhcCCEEEEecccccccc--ccchhhhhhcCCCcccEEEEcCCccCCCCcCc
Q psy13453 701 -DNLEELGPICQEYNIWLHVDAAYAGSAL--LLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDC 760 (764)
Q Consensus 701 -Dpl~eIa~i~~~~glwLHVDaA~Gg~~l--~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~ 760 (764)
+.|++|.++|++||+++|+|||--+.++ .-...+.... .+|++++++.|.++.|.|.
T Consensus 144 ~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~---~~D~v~~~~tK~~g~~~Ga 203 (290)
T PF01212_consen 144 LEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAA---GADSVSFGGTKNGGAPGGA 203 (290)
T ss_dssp HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHT---TSSEEEEETTSTT-SSSEE
T ss_pred HHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhh---hCCEEEEEEEcccccccce
Confidence 6888888999999999999999544333 1223344454 4699999999999999764
No 73
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.51 E-value=5.5e-13 Score=145.88 Aligned_cols=195 Identities=15% Similarity=0.035 Sum_probs=139.1
Q ss_pred cCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHH
Q psy13453 529 FPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVA 608 (764)
Q Consensus 529 ~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aA 608 (764)
.|++......+-+.+...++. .++....+-..+.+.+++++|.++.. ...++++|||+++..++...
T Consensus 4 ~p~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~la~~~~~~~~~-------~~i~~~~~gt~~l~~~~~~~ 70 (355)
T TIGR03301 4 TPGPLSTSATVRDAMLVDWCH------WDSEFNDVTDQVRDRLLALAGGDDNH-------TCVLLQGSGTFAVEATIGSL 70 (355)
T ss_pred cCCCCCCCHHHHHHhhhhccC------CCHHHHHHHHHHHHHHHHHhcCCCCC-------cEEEEeCCcHHHHHHHHHhc
Confidence 344444444555555443332 13344577888999999999997631 24668999999987776543
Q ss_pred HHHHhhhhccCCCCCccccccCceEEEecCCcchh-HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceE
Q psy13453 609 KRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS-VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCC 687 (764)
Q Consensus 609 R~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S-v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~ 687 (764)
. .. ++-+++++...+.+ +..++...|++++.|+.+.++.+|+++|++.+.+.. ...+
T Consensus 71 ~----~~--------------~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~----~~~~ 128 (355)
T TIGR03301 71 V----PR--------------DGKLLVLINGAYGERLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADP----DITH 128 (355)
T ss_pred c----CC--------------CCeEEEECCCchhhHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCC----CceE
Confidence 2 10 12245555554443 567788899999999998888999999999997532 2457
Q ss_pred EEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 688 LIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 688 VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
|+.+..+|.+|.+.|+++|+++|++||++++||++++.+.... .+... .+|.+..++|||++.|.|+|+++
T Consensus 129 v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~-----~~~~~-~~d~~~~s~~K~l~~~~G~g~~~ 199 (355)
T TIGR03301 129 VATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPI-----DIEEL-DVDALIASANKCLEGVPGFGFVI 199 (355)
T ss_pred EEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCccc-----chhhc-CccEEEecCCcccccCCceeEEE
Confidence 7778888899999999999999999999999999876543221 11111 35999999999998898988874
No 74
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.49 E-value=1.4e-12 Score=144.99 Aligned_cols=165 Identities=13% Similarity=0.099 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS 643 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S 643 (764)
..+..+.+++++|.++ ..+++||+++|..++.+.. . ++..|+++...|+|
T Consensus 53 ~~~~~e~lA~~~g~~~-----------~~i~~g~~~a~~~~~~~l~----~---------------~gd~Vl~~~~~h~s 102 (370)
T TIGR02539 53 IHDFLEDLAEFLGMDE-----------ARVTHGAREGKFAVMHALC----K---------------EGDWVVLDGLAHYT 102 (370)
T ss_pred HHHHHHHHHHHhCCCc-----------eEEECChHHHHHHHHHHhh----C---------------CCCEEEECCcccHH
Confidence 3455667899999865 4678999999877665432 1 12257789999999
Q ss_pred HHHHHHhCCCceEEEecC--CCCcccHHHHHHHHHHhhhc-CCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEe
Q psy13453 644 VEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAK-GLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVD 720 (764)
Q Consensus 644 v~kAa~~lGl~v~~Vp~d--~~g~md~~~Le~~I~~~~~~-G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVD 720 (764)
...+++..|.+++.+|.+ .++.+|+++|+++|++..++ +..+-+|+.+..++.+|.+.|+++|+++|++||++++||
T Consensus 103 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livD 182 (370)
T TIGR02539 103 SYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLN 182 (370)
T ss_pred HHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEE
Confidence 999999999999999986 35899999999999763322 124567888888899999999999999999999999999
Q ss_pred ccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 721 AAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 721 aA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+||+.+.+..+- . .. .+|.++.++|||++.+.++|+++
T Consensus 183 ea~~~g~~~~~~-~----~~-~~di~v~s~sK~~~~~g~~G~l~ 220 (370)
T TIGR02539 183 CAYTVGRMPVSA-K----EI-GADFIVGSGHKSMAASGPCGVLG 220 (370)
T ss_pred CccccCCcCCCH-H----Hc-CCCEEEeeCcccccCCCCEEEEE
Confidence 999876322211 1 11 36999999999999777677653
No 75
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.46 E-value=5.1e-13 Score=143.46 Aligned_cols=174 Identities=16% Similarity=0.183 Sum_probs=126.8
Q ss_pred ccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccc
Q psy13453 549 LIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDI 628 (764)
Q Consensus 549 ~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~ 628 (764)
.....|..+|....+|+ ++++++|. . .++|+++||++|.+||.+..+
T Consensus 26 ~~~~~YG~D~~~~~~e~----~~ae~~g~-~----------a~~Fv~sGT~aN~lal~~~~~------------------ 72 (342)
T COG2008 26 VGDDVYGEDPTTNALEQ----RIAELFGK-E----------AALFVPSGTQANQLALAAHCQ------------------ 72 (342)
T ss_pred cCCCCCCCCHHHHHHHH----HHHHHhCC-c----------eEEEecCccHHHHHHHHHhcC------------------
Confidence 34567888888887776 77888887 2 479999999999999986542
Q ss_pred cCceEEEecCCcchhHHHHHH--hCC-CceEEEecCCCCcccHHHHHHHHHHhh-hcCCCceEEEEeeccCCccccc---
Q psy13453 629 RNKLVAYTSDQSNSSVEKSAI--IGD-VPVRQLRSDDNGVLRGDALLTAVKEDL-AKGLIPCCLIATLGTTGTCAFD--- 701 (764)
Q Consensus 629 ~~~~vi~~S~~aH~Sv~kAa~--~lG-l~v~~Vp~d~~g~md~~~Le~~I~~~~-~~G~~p~~VvataGTT~~GaiD--- 701 (764)
|.-.++|.+.+|....++.. .++ +..+.+...++|+|++++++..|..+. -.-.+|.+|..|.-| +.|.+=
T Consensus 73 -~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~t-e~GtVy~l~ 150 (342)
T COG2008 73 -PGESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTAT-EGGTVYPLD 150 (342)
T ss_pred -CCCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccC-CCceecCHH
Confidence 12258899999999988743 333 443333344799999999999998632 233467777777776 888884
Q ss_pred cHHHHHHHHHhcCCEEEEeccccccccc--cchhhhhhcCCCcccEEEEcCCccCCCCcCc
Q psy13453 702 NLEELGPICQEYNIWLHVDAAYAGSALL--LPEYAHLKRGLEYVDSFDFNTHKWLLVNFDC 760 (764)
Q Consensus 702 pl~eIa~i~~~~glwLHVDaA~Gg~~l~--~~~~r~~l~gie~aDSit~d~HK~l~~P~~~ 760 (764)
.|++|.++|++||+.||+|||--+.++. -+..+....++ ||+++.+.|.++.|.+.
T Consensus 151 el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~---D~v~~~~tK~g~~~~gA 208 (342)
T COG2008 151 ELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYV---DSVSFCLTKGGGAPVGA 208 (342)
T ss_pred HHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhC---CEEEEecccCCcceeee
Confidence 5556677899999999999994443332 23334444444 99999999999999764
No 76
>PLN02721 threonine aldolase
Probab=99.45 E-value=8e-13 Score=144.78 Aligned_cols=173 Identities=17% Similarity=0.156 Sum_probs=118.7
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 554 WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
+..+|...++|+. +++++|.+. ++++++||++++.++.+.... ++..
T Consensus 36 ~~~~~~~~~l~~~----la~~~~~~~-----------~~~~~~Gs~a~~~~l~~~~~~------------------~gd~ 82 (353)
T PLN02721 36 LGYDPTALRLEEE----MAKIFGKEA-----------ALFVPSGTMGNLISVLVHCDV------------------RGSE 82 (353)
T ss_pred cCCCHHHHHHHHH----HHHHhCCce-----------eEEecCccHHHHHHHHHHccC------------------CCCe
Confidence 3345666666654 566666532 588899999998777653210 1224
Q ss_pred EEecCCcchhHHH---HHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcC-CCceEEEEee-ccCCccccc---cHHH
Q psy13453 634 AYTSDQSNSSVEK---SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKG-LIPCCLIATL-GTTGTCAFD---NLEE 705 (764)
Q Consensus 634 i~~S~~aH~Sv~k---Aa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G-~~p~~Vvata-GTT~~GaiD---pl~e 705 (764)
|++++.+|+++.+ .+...|++++.+|.++++.+|+++|++.|++....+ ..+.+|+.+. -++.+|.+- ++++
T Consensus 83 Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~ 162 (353)
T PLN02721 83 VILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDK 162 (353)
T ss_pred EEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHH
Confidence 7889999998887 467789999999998889999999999997543222 2344555544 344567653 4889
Q ss_pred HHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCc
Q psy13453 706 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDC 760 (764)
Q Consensus 706 Ia~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~ 760 (764)
|+++|++||+|+|+|+||............. .-.+.+|++++++|||++.|.|+
T Consensus 163 l~~l~~~~g~~livD~a~~~~~~~~~~~~~~-~~~~~~d~~~~s~sK~l~~~~G~ 216 (353)
T PLN02721 163 VGELAKRHGLKLHIDGARIFNASVALGVPVH-RLVKAADSVSVCLSKGLGAPVGS 216 (353)
T ss_pred HHHHHHHcCCEEEEEchhhhcchhhhCCCHH-HHhhhCCEEEEecccccCCceee
Confidence 9999999999999999975332111111111 11235699999999999988664
No 77
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.43 E-value=4e-12 Score=137.78 Aligned_cols=187 Identities=17% Similarity=0.084 Sum_probs=139.8
Q ss_pred HhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCc
Q psy13453 545 GAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLT 624 (764)
Q Consensus 545 ~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~ 624 (764)
...+.+...+...+...++++.+.+++...+|.+.. ....++++|+|+++..++.+...
T Consensus 23 ~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~-------~~~~~~~~~~t~a~~~~~~~~~~-------------- 81 (350)
T cd00609 23 AALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVP-------PEEIVVTNGAQEALSLLLRALLN-------------- 81 (350)
T ss_pred HhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC-------cceEEEecCcHHHHHHHHHHhCC--------------
Confidence 456666777788888999999999999998876332 24578999999998777665421
Q ss_pred cccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccH--HHHHHHHHHhhhcCCCceEEEEeeccCCcccccc
Q psy13453 625 ENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRG--DALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN 702 (764)
Q Consensus 625 ~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~--~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp 702 (764)
++..|+++..+|.++.++++.+|..++.+|.++++.++. +.+++.+.+ .+-+|+++.+++.+|.+.|
T Consensus 82 -----~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~------~~~~v~i~~~~~~tG~~~~ 150 (350)
T cd00609 82 -----PGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTP------KTKLLYLNNPNNPTGAVLS 150 (350)
T ss_pred -----CCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCc------cceEEEEECCCCCCCcccC
Confidence 123588899999999999999999999999998888876 555544322 3558888889999999998
Q ss_pred HHHHH---HHHHhcCCEEEEeccccccccccchhhh-hhcCCCcccEEEEcCCccCC-CCcCceee
Q psy13453 703 LEELG---PICQEYNIWLHVDAAYAGSALLLPEYAH-LKRGLEYVDSFDFNTHKWLL-VNFDCSAM 763 (764)
Q Consensus 703 l~eIa---~i~~~~glwLHVDaA~Gg~~l~~~~~r~-~l~gie~aDSit~d~HK~l~-~P~~~g~l 763 (764)
++++. ++|+++|+|+|+|+||+++......... ...+...+|.+..++||+++ .+.++|++
T Consensus 151 ~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i 216 (350)
T cd00609 151 EEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYL 216 (350)
T ss_pred HHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEE
Confidence 66665 8999999999999999886543221100 11122245888899999998 45567765
No 78
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.43 E-value=1.2e-12 Score=142.61 Aligned_cols=162 Identities=15% Similarity=0.159 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS 643 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S 643 (764)
-.++.+++++++| ++ ..++|+|||++|..++.+.. . ++..|+++..+|++
T Consensus 34 ~~~l~~~~a~~~g-~~----------~~~~~~~gt~a~~~~~~~l~----~---------------~gd~v~~~~~~~~~ 83 (338)
T cd06502 34 TAKLEARAAELFG-KE----------AALFVPSGTAANQLALAAHT----Q---------------PGGSVICHETAHIY 83 (338)
T ss_pred HHHHHHHHHHHhC-CC----------eEEEecCchHHHHHHHHHhc----C---------------CCCeEEEecCccee
Confidence 4455678899988 43 58999999999887776431 1 12257789999988
Q ss_pred HHHH---HHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcC-CCceEEEEeeccCCccc---cccHHHHHHHHHhcCCE
Q psy13453 644 VEKS---AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKG-LIPCCLIATLGTTGTCA---FDNLEELGPICQEYNIW 716 (764)
Q Consensus 644 v~kA---a~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G-~~p~~VvataGTT~~Ga---iDpl~eIa~i~~~~glw 716 (764)
+.++ +.+.|++++.+|.+. +.+|+++|++++++..+++ ..+-+|+.+..++ +|. .+++++|+++|++||+|
T Consensus 84 ~~~~~~~~~~~g~~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n-~g~~~~~~~l~~i~~~~~~~~~~ 161 (338)
T cd06502 84 TDEAGAPEFLSGVKLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTE-GGTVYPLDELKAISALAKENGLP 161 (338)
T ss_pred eecCCcHHHHcCceEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecC-CccccCHHHHHHHHHHHHHcCCe
Confidence 7653 456899999999865 8899999999997532211 2355666666665 453 57889999999999999
Q ss_pred EEEeccccccccccc--hhhhhhcCCCcccEEEEcCCccCCCCcCc
Q psy13453 717 LHVDAAYAGSALLLP--EYAHLKRGLEYVDSFDFNTHKWLLVNFDC 760 (764)
Q Consensus 717 LHVDaA~Gg~~l~~~--~~r~~l~gie~aDSit~d~HK~l~~P~~~ 760 (764)
+|||+||+.+..... ...... ..+|.++.++|||++.|.++
T Consensus 162 livDea~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~~~g~ 204 (338)
T cd06502 162 LHLDGARLANAAAALGVALKTYK---SGVDSVSFCLSKGGGAPVGA 204 (338)
T ss_pred EeechHHHHHHHHhcCCCHHHHH---hcCCEEEEeccccCCCccce
Confidence 999999864322111 111111 35699999999999988654
No 79
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.42 E-value=4.6e-12 Score=140.16 Aligned_cols=172 Identities=14% Similarity=0.003 Sum_probs=128.5
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEe
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT 636 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~ 636 (764)
++.......++.+.+++++|.+++ ....++|++||+++..++..... + ++-+++.
T Consensus 32 ~~~~~~~~~~~~~~l~~l~~~~~~-------~~~i~~~~~gt~~l~~~~~~l~~---~---------------~~~vlv~ 86 (368)
T PRK13479 32 DDDFNALTASVRAKLVAIATGEEG-------YTCVPLQGSGTFSVEAAIGSLVP---R---------------DGKVLVP 86 (368)
T ss_pred ChHHHHHHHHHHHHHHHHhCCCCC-------ceEEEEcCCcHHHHHHHHHhccC---C---------------CCeEEEE
Confidence 355667888999999999998642 12356899999998777654311 0 1223333
Q ss_pred cCCcchhH--HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcC
Q psy13453 637 SDQSNSSV--EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYN 714 (764)
Q Consensus 637 S~~aH~Sv--~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~g 714 (764)
...+|.. .+.+...|++++.||++.++.+|+++|++++++..+ +-+|..+..+|.+|.+.|+++|+++|+++|
T Consensus 87 -~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~----~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~ 161 (368)
T PRK13479 87 -DNGAYGARIAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPR----ITHVALVHCETTTGILNPLDEIAAVAKRHG 161 (368)
T ss_pred -eCCchHHHHHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCC----CcEEEEEcccCccccccCHHHHHHHHHHcC
Confidence 3445443 577888999999999988889999999999875321 336778888999999999999999999999
Q ss_pred CEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 715 IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 715 lwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
++++||++++.+.... .+... .+|.+..++|||++.|.|+|++|
T Consensus 162 ~~livDa~~~~g~~~~-----~~~~~-~~d~~v~s~~K~l~g~~G~G~l~ 205 (368)
T PRK13479 162 KRLIVDAMSSFGAIPI-----DIAEL-GIDALISSANKCIEGVPGFGFVI 205 (368)
T ss_pred CEEEEEcccccCCccc-----ccccc-CceEEEecCccccccCCCceEEE
Confidence 9999998875543221 12211 36999999999999999999875
No 80
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.41 E-value=3.5e-12 Score=146.74 Aligned_cols=236 Identities=9% Similarity=-0.023 Sum_probs=155.7
Q ss_pred ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc-cCchhhh
Q psy13453 11 AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI-QSLNAPV 89 (764)
Q Consensus 11 ~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i-Dpi~~ia 89 (764)
.+.++. .|-|..++++.+|+.. +.||+++++++|+++|+++|++++ -.++.+.++ ++|.+ +|+++++
T Consensus 164 Vlv~~~---~hp~~~~~~~~~G~~v---v~v~~~~~~~~D~e~L~~~i~~~t-----~~V~v~~Pn-~tG~~~~dl~eI~ 231 (481)
T PRK04366 164 VIVPDS---AHGTNPASAAMAGFKV---VEIPSNEDGLVDLEALKAAVGEDT-----AALMLTNPN-TLGLFERNILEIA 231 (481)
T ss_pred EEEcCC---ccHhHHHHHHHcCCEE---EEeecCCCCCcCHHHHHhhcccCC-----eEEEEeCCC-CccccchHHHHHH
Confidence 555665 6888889999999976 999999889999999999997642 244556788 89998 6899988
Q ss_pred c-----CCCceeccccc---------------------cc-----------cceeeeecCCCc--ccc--------cccc
Q psy13453 90 S-----NGPLKVGGVLR---------------------RV-----------YSSCLVPRGQKS--LRT--------TVLF 122 (764)
Q Consensus 90 ~-----~~wlHVDa~l~---------------------~~-----------y~s~ll~rd~~~--l~~--------~~s~ 122 (764)
+ +.|+|||++.. |+ +++++.++++-. +.. .|..
T Consensus 232 ~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l 311 (481)
T PRK04366 232 EIVHEAGGLLYYDGANLNAILGKARPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRL 311 (481)
T ss_pred HHHHHcCCEEEEEecChhhhcccCCccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceee
Confidence 6 78999998520 11 112344443210 000 0000
Q ss_pred ccccCCcccCCCCccc-----HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC-CCceeEEEEeecc
Q psy13453 123 HFLFQHWQIPLGRRFR-----ALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCP-PSMGLVCFRLKVR 196 (764)
Q Consensus 123 ~~d~~d~tle~SRr~~-----ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~-P~l~iV~Fry~P~ 196 (764)
..+ +...+.-.|.+. +++.|+.|+++|.+|++++.++++++|+||++.|++. +++..+ |.++.+.|.. .
T Consensus 312 ~~~-r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~~~~--~ 386 (481)
T PRK04366 312 DYD-RPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFVLSG--K 386 (481)
T ss_pred ccc-ccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEEEEC--c
Confidence 000 111222233333 4688999999999999999999999999999999987 454432 3333333332 1
Q ss_pred ccccccccccCccCCccHHHHHHHHHHHhcCcEEEEece-eCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHccCC
Q psy13453 197 FWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGS-FQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLRGKS 275 (764)
Q Consensus 197 ~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~-l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~~~~ 275 (764)
... ..+.-..++.++|.++|+....... .-....+|++++- .++++|||.+++.++++.+++.+++.
T Consensus 387 ~~~-----------~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e-~~t~edid~l~~~l~~i~~~~~~~~~ 454 (481)
T PRK04366 387 KLK-----------ETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTE-TESKETLDAFIAAMKQIAEEAKENPE 454 (481)
T ss_pred ccc-----------ccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccC-CCCHHHHHHHHHHHHHHHHHHHhCcH
Confidence 000 0011246799999999985331110 1113468887555 67899999999999999999887763
No 81
>KOG1368|consensus
Probab=99.38 E-value=1.6e-12 Score=135.10 Aligned_cols=174 Identities=17% Similarity=0.245 Sum_probs=124.4
Q ss_pred CccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccC
Q psy13453 551 GFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRN 630 (764)
Q Consensus 551 ~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~ 630 (764)
-..|...|-+.+||+++ ++++|- ..|.|+++||++|++|++..... +
T Consensus 49 DdVyGeD~tt~rLE~~v----A~l~GK-----------EAgLFv~SGTmgNllaIm~Hc~~------------------r 95 (384)
T KOG1368|consen 49 DDVYGEDPTTNRLEQRV----AELFGK-----------EAGLFVPSGTMGNLLAIMVHCHQ------------------R 95 (384)
T ss_pred cccccCCccHHHHHHHH----HHHhCc-----------cceeeecccccccHHHHHHHhcC------------------C
Confidence 47788999999999976 555553 24899999999999999876543 1
Q ss_pred ceEEEecCCcchhHHHHH---HhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccC--Ccc-ccccHH
Q psy13453 631 KLVAYTSDQSNSSVEKSA---IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTT--GTC-AFDNLE 704 (764)
Q Consensus 631 ~~vi~~S~~aH~Sv~kAa---~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT--~~G-aiDpl~ 704 (764)
+-.|++.+.+|.-..+++ .+.|+.++.|...++|.||++++|++|....-.-+.|.-=.+...+| ++| .+=||+
T Consensus 96 g~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle 175 (384)
T KOG1368|consen 96 GSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLE 175 (384)
T ss_pred CceEEeccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHH
Confidence 235889999997766664 34678899999999999999999999985432222333222233333 335 666666
Q ss_pred H---HHHHHHhcCCEEEEecc--ccccccc-cchhhhhhcCCCcccEEEEcCCccCCCCcCce
Q psy13453 705 E---LGPICQEYNIWLHVDAA--YAGSALL-LPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCS 761 (764)
Q Consensus 705 e---Ia~i~~~~glwLHVDaA--~Gg~~l~-~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g 761 (764)
+ |.++|+++|+.||+||| |.++... +|- +.. .+.+||+++.+.|.|++|.|+=
T Consensus 176 ~~~~v~~lak~~glkLH~DGARi~NAavasgV~v-k~i---~~~fDSVsiCLSKglgAPVGSV 234 (384)
T KOG1368|consen 176 ELDRVKALAKRHGLKLHMDGARIFNAAVASGVPV-KKI---CSAFDSVSICLSKGLGAPVGSV 234 (384)
T ss_pred HHHHHHHHHhccCCeeecchhhhhhHHHHcCCCH-HHH---HHhhhhhhhhhhccCCCCcccE
Confidence 5 55679999999999999 3333222 221 222 2356999999999999999853
No 82
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.37 E-value=2.5e-12 Score=143.55 Aligned_cols=169 Identities=19% Similarity=0.156 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
..-.++.+.+++++|.+.+| ++|.|+|.+|+.++.++.. +.-.|++...+|
T Consensus 66 G~I~eAe~~aA~~fGAd~t~----------flvnGsT~g~~a~i~a~~~-------------------~gd~VLv~RN~H 116 (417)
T PF01276_consen 66 GIIKEAEELAARAFGADKTF----------FLVNGSTSGNQAMIMALCR-------------------PGDKVLVDRNCH 116 (417)
T ss_dssp THHHHHHHHHHHHHTESEEE----------EESSHHHHHHHHHHHHHTT-------------------TTCEEEEETT--
T ss_pred cHHHHHHHHHHHhcCCCeEE----------EEecCchHHHHHHHHHhcC-------------------CCCEEEEcCCcH
Confidence 35566778899999998864 4667777888887776532 123689999999
Q ss_pred hhHHHHHHhCCCceEEEecCC-----CCcccH-----HHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 642 SSVEKSAIIGDVPVRQLRSDD-----NGVLRG-----DALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 642 ~Sv~kAa~~lGl~v~~Vp~d~-----~g~md~-----~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
-|+..|+.+.|+..+.|+... -+.+++ +.++++|++....+. +-+|++|..|. .|.+-||++|+++|+
T Consensus 117 kSv~~alil~ga~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~-~~~vvlt~PTY-~Gv~~di~~I~~~~h 194 (417)
T PF01276_consen 117 KSVYNALILSGAIPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKA-PRLVVLTSPTY-YGVCYDIKEIAEICH 194 (417)
T ss_dssp HHHHHHHHHHTEEEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHC-ESEEEEESS-T-TSEEE-HHHHHHHHC
T ss_pred HHHHHHHHHcCCeEEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccC-ceEEEEeCCCC-CeEEECHHHHHHHhc
Confidence 999999999999988888741 124666 999999997654322 55677777655 799999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCccc-------EEEEcCCccCCCCcCceee
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVD-------SFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aD-------Sit~d~HK~l~~P~~~g~l 763 (764)
++++.||||.|||+.+.|.+-.+..+ .+ .|| -++-|.||.|.+-.+++++
T Consensus 195 ~~~~~llvDEAhGah~~F~~lp~~a~-~~-gad~~~~~~~~vvqS~HKtL~altQts~l 251 (417)
T PF01276_consen 195 KHGIPLLVDEAHGAHFGFHPLPRSAL-AL-GADRPNDPGIIVVQSTHKTLPALTQTSML 251 (417)
T ss_dssp CTECEEEEE-TT-TTGGCSGGGTTCS-ST-TSS-CTSBEEEEEEEHHHHSSS-TT-EEE
T ss_pred ccCCEEEEEccccccccCCCCccchh-hc-cCccccccceeeeechhhcccccccceEE
Confidence 99999999999999988885444432 12 478 9999999999999988876
No 83
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.34 E-value=3e-11 Score=134.21 Aligned_cols=173 Identities=18% Similarity=0.104 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 560 CTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 560 ~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
...+.+++.+++++++|.+ ..++|+|+|+|++.++.+.... ..+.--..+.. ...+.-.|+++.
T Consensus 43 ~~~~~~~~~~~~a~~~g~~-----------~~~~~~g~t~al~~al~al~~~---Gd~~~~~~~~~-s~~~~~eVi~~~- 106 (363)
T TIGR01437 43 IKELVNKTGEYIANLLGVE-----------DAVIVSSASAGIAQSVAAVITR---GNRYLVENLHD-SKIEVNEVVLPK- 106 (363)
T ss_pred HHHHHHHHHHHHHHhhCCC-----------eEEEEcCHHHHHHHHHHHHhcC---CCcchhhcccc-cccccceEEEEC-
Confidence 4567788889999999864 3589999999999988765321 10000000000 001111344544
Q ss_pred cchhH-----HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcC
Q psy13453 640 SNSSV-----EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYN 714 (764)
Q Consensus 640 aH~Sv-----~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~g 714 (764)
.|+.. ..++.+.|..++.+++ ++.+|+++|+++|.+.++ .++..+...+.+|.+-|+++|+++|++||
T Consensus 107 ~~~~~~~~~~~~~~~~~g~~~v~v~~--~~~~d~~~le~ai~~~t~-----ai~~v~~~~~~~g~~~~~~~i~~~a~~~g 179 (363)
T TIGR01437 107 GHNVDYGAPVETMVRLGGGKVVEAGY--ANECSAEQLEAAITEKTA-----AILYIKSHHCVQKSMLSVEDAAQVAQEHN 179 (363)
T ss_pred ccchhcCCchHHHHHhcCCeEEEEcC--CCCCCHHHHHHhcChhce-----EEEEEecCCCCcCCcCCHHHHHHHHHHcC
Confidence 66653 3456778888888876 467999999999986543 23335555667899999999999999999
Q ss_pred CEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 715 IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 715 lwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+++|+|+||+... +...+ + .+|.+++++|||++.|. .|+++
T Consensus 180 i~vivD~a~~~~~------~~~~~-~-g~D~~~~S~~K~l~gp~-~G~l~ 220 (363)
T TIGR01437 180 LPLIVDAAAEEDL------QKYYR-L-GADLVIYSGAKAIEGPT-SGLVL 220 (363)
T ss_pred CeEEEECCCCCch------HHHHH-c-CCCEEEEeCCcccCCCc-eEEEE
Confidence 9999999997311 11111 1 36999999999999997 67653
No 84
>PRK07179 hypothetical protein; Provisional
Probab=99.33 E-value=3.2e-11 Score=135.67 Aligned_cols=197 Identities=14% Similarity=0.071 Sum_probs=131.7
Q ss_pred CCCCCccccccCCCCChHHHHHHHHHHhhccc--Ccccc-CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeC
Q psy13453 519 HWQSPQFNAYFPTGSSYPSIVGDMLSGAFGLI--GFSWL-SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQS 595 (764)
Q Consensus 519 ~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~n--~~~~~-~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTs 595 (764)
.+.+-+|+++.. .+.....+.+.+....+.. ...+. ..+...++| +.+++++|.+. .+||+
T Consensus 58 ~~~~~~YL~l~~-~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~-----------~~~~~ 121 (407)
T PRK07179 58 ILQSNDYLNLSG-HPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFE----KKLAAFTGFES-----------CLLCQ 121 (407)
T ss_pred EeecCCccCCCC-CHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHH----HHHHHHhCCCc-----------EEEEC
Confidence 355556777762 2333344444444332221 11121 224555666 47777788743 48999
Q ss_pred ChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHH
Q psy13453 596 TASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAV 675 (764)
Q Consensus 596 GgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I 675 (764)
||++||..++.+... +...++++..+|.|+...+...|..+..++ ..|+++|+++|
T Consensus 122 sG~~An~~~l~~l~~-------------------~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~-----~~d~~~l~~~l 177 (407)
T PRK07179 122 SGWAANVGLLQTIAD-------------------PNTPVYIDFFAHMSLWEGVRAAGAQAHPFR-----HNDVDHLRRQI 177 (407)
T ss_pred CHHHHHHHHHHHhCC-------------------CCCEEEEECCcCHHHHHHHHHCCCeEEEec-----CCCHHHHHHHH
Confidence 999999888764321 112577899999999998888888765443 25899999998
Q ss_pred HHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhh--cCC-CcccEEEEcCCc
Q psy13453 676 KEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLK--RGL-EYVDSFDFNTHK 752 (764)
Q Consensus 676 ~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l--~gi-e~aDSit~d~HK 752 (764)
++. .+.+|+....++.+|.+.|+++|+++|++||+++|+|.+|+.+..- +..+..+ -|+ +.+|.++.++||
T Consensus 178 ~~~-----~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g-~~g~g~~~~~~~~~~vdi~~~S~sK 251 (407)
T PRK07179 178 ERH-----GPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHG-PQGAGLVAELGLTSRVHFITASLAK 251 (407)
T ss_pred Hhc-----CCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcC-CCCCchHHhcCCCCCCCEEEeechH
Confidence 652 1457777778889999999999999999999999999999864321 1111001 122 356999999999
Q ss_pred cCCCCcCceee
Q psy13453 753 WLLVNFDCSAM 763 (764)
Q Consensus 753 ~l~~P~~~g~l 763 (764)
+++.+ +|++
T Consensus 252 ~~g~~--~G~l 260 (407)
T PRK07179 252 AFAGR--AGII 260 (407)
T ss_pred hhhcc--CeEE
Confidence 99854 5655
No 85
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.31 E-value=1.6e-11 Score=137.09 Aligned_cols=161 Identities=17% Similarity=-0.016 Sum_probs=121.8
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeC-ChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQS-TASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVA 634 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTs-GgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi 634 (764)
.++.+.++-.++.+.+++++|.++. ...+|++ +||+++-.++... ... ++..+
T Consensus 42 r~~~f~~~~~~~r~~l~~l~~~~~~--------~~v~~~~gs~T~~~~~~~~~l----~~~--------------~~~~v 95 (378)
T PRK03080 42 RQKPVKALLKRVIEGTRELLSLPEG--------YEVGIVPGSDTGAWEMALWSL----LGA--------------RRVDH 95 (378)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCC--------ceEEEECCchHHHHHHHHHhc----CCC--------------CcceE
Confidence 3567889999999999999998653 3467775 8888865554321 110 02223
Q ss_pred EecCCcchhHHHH--HHhCCC-ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 635 YTSDQSNSSVEKS--AIIGDV-PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 635 ~~S~~aH~Sv~kA--a~~lGl-~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
+. ...|.+.... ++..|+ +++.++.+..+..|+++++. . -.|+.|..+|.+|.+.|+++|++ +
T Consensus 96 i~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~g~~~d~~~i~~-----~------~~V~~~h~~t~tG~~~pi~~I~~--~ 161 (378)
T PRK03080 96 LA-WESFGSKWATDVVKQLKLEDPRVLEADYGSLPDLSAVDF-----D------RDVVFTWNGTTTGVRVPVARWIG--A 161 (378)
T ss_pred EE-eCHHHHHHHHHHHhhcCCCCceEeccCCCCCCCHhhcCC-----C------CCEEEEecCCccceeccchhhcc--c
Confidence 33 4677765443 356799 99999988777888776332 1 15889999999999999999999 8
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
++|+++.|||+++.+....+- +. +|.+.++.||||+.|.|+|++|
T Consensus 162 ~~g~~~vVDa~qs~G~~pidv-----~~---iD~~~~s~~K~l~~P~G~g~l~ 206 (378)
T PRK03080 162 DREGLTICDATSAAFALPLDW-----SK---LDVYTFSWQKVLGGEGGHGMAI 206 (378)
T ss_pred cCCCeEEEecccccccCCCCH-----HH---CcEEEEehhhhCCCCCceEEEE
Confidence 899999999999998776652 22 4999999999999999999986
No 86
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.30 E-value=7.7e-11 Score=128.80 Aligned_cols=161 Identities=12% Similarity=-0.003 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
.....++.+++++++|.+. .+++++||++|+.++.+.. . ++..|++++..
T Consensus 45 ~~~~~~l~~~la~~~~~~~-----------~iv~~sg~~a~~~~~~~~~----~---------------~gd~Vl~~~~~ 94 (349)
T cd06454 45 SDLHEELEEELAEFHGKEA-----------ALVFSSGYAANDGVLSTLA----G---------------KGDLIISDSLN 94 (349)
T ss_pred chHHHHHHHHHHHHhCCCC-----------EEEeccHHHHHHHHHHHhc----C---------------CCCEEEEehhh
Confidence 4455566677888887643 4777888998887665432 1 11257788999
Q ss_pred chhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEe
Q psy13453 641 NSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVD 720 (764)
Q Consensus 641 H~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVD 720 (764)
|.++..++...|..++.++. +|++.+++.|++.. +...+.+|+.+..++.+|.+.|+++|+++|+++|+++++|
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~-----~~~~~le~~i~~~~-~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD 168 (349)
T cd06454 95 HASIIDGIRLSGAKKRIFKH-----NDMEDLEKLLREAR-RPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVD 168 (349)
T ss_pred hHHHHHHHHHcCCceEEecC-----CCHHHHHHHHHHhh-ccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEE
Confidence 99999999999998887752 58889999987643 2235678888888889999999999999999999999999
Q ss_pred ccccccccc-cchhhhhhc-CCCcccEEEEcCCccCCCC
Q psy13453 721 AAYAGSALL-LPEYAHLKR-GLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 721 aA~Gg~~l~-~~~~r~~l~-gie~aDSit~d~HK~l~~P 757 (764)
++|+.+.+. .......+. ....+|.++.++||+++.+
T Consensus 169 ~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 207 (349)
T cd06454 169 EAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAV 207 (349)
T ss_pred ccccccccCCCCCChhhhccccccCcEEEeechhhhccc
Confidence 999754331 110000111 1235699999999999864
No 87
>PRK15029 arginine decarboxylase; Provisional
Probab=99.30 E-value=5.8e-11 Score=141.32 Aligned_cols=172 Identities=17% Similarity=0.142 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
.+-.++.+..+++||.+.+| +.|.|+|.+|+.++.++.. +.-.|++...+|
T Consensus 205 G~I~eAq~~aA~~fgA~~t~----------FlvNGST~gn~a~i~a~~~-------------------~gd~Vlv~RN~H 255 (755)
T PRK15029 205 GAFGESEKYAARVFGADRSW----------SVVVGTSGSNRTIMQACMT-------------------DNDVVVVDRNCH 255 (755)
T ss_pred cHHHHHHHHHHHHhCCCcEE----------EEeCChhHHHHHHHHHhcC-------------------CCCEEEeecccH
Confidence 35566777899999998764 4778888888866654421 123688999999
Q ss_pred hhHHHHHHhCCCceEEEecC--C---CCccc-----HHHHHHHHHHhh----hcCCCceEEEEeeccCCccccccHHHHH
Q psy13453 642 SSVEKSAIIGDVPVRQLRSD--D---NGVLR-----GDALLTAVKEDL----AKGLIPCCLIATLGTTGTCAFDNLEELG 707 (764)
Q Consensus 642 ~Sv~kAa~~lGl~v~~Vp~d--~---~g~md-----~~~Le~~I~~~~----~~G~~p~~VvataGTT~~GaiDpl~eIa 707 (764)
-|+..|+.+.|+..+.++.. + -+.++ ++.++++|++.. +++.+|..|++|..|. .|.+-|+++|+
T Consensus 256 KSv~~al~L~ga~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~ 334 (755)
T PRK15029 256 KSIEQGLILTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQ 334 (755)
T ss_pred HHHHHHHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHH
Confidence 99999999999988888654 1 23455 999999997642 2356788888888765 69999999999
Q ss_pred HHHHhcCCEEEEeccccccccccchhhh--hhc----CCCccc-EEEEcCCccCCCCcCceee
Q psy13453 708 PICQEYNIWLHVDAAYAGSALLLPEYAH--LKR----GLEYVD-SFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 708 ~i~~~~glwLHVDaA~Gg~~l~~~~~r~--~l~----gie~aD-Sit~d~HK~l~~P~~~g~l 763 (764)
++|++++++||||.|||+.+.|.|.+.. -+. .-..|| -++-|.||+|.+-.++++|
T Consensus 335 ~~~h~~~~~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~L 397 (755)
T PRK15029 335 DLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYI 397 (755)
T ss_pred HHHHhcCCeEEEECccccccccCccccccccccccccccCCCceEEEEchhhcccchhhhhhh
Confidence 9999999999999999999999887653 121 013588 9999999999987777654
No 88
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.30 E-value=3.8e-11 Score=131.48 Aligned_cols=158 Identities=13% Similarity=0.040 Sum_probs=115.0
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEE
Q psy13453 555 LSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVA 634 (764)
Q Consensus 555 ~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi 634 (764)
...|...++|+ .+++++|.+ ..++|++||+|+..++.+.+. .++-.|
T Consensus 15 ~~~~~~~~~~~----~la~~~~~~-----------~~~~~~sgt~al~~~l~~l~~------------------~~gd~v 61 (352)
T cd00616 15 TLGPKVREFEK----AFAEYLGVK-----------YAVAVSSGTAALHLALRALGI------------------GPGDEV 61 (352)
T ss_pred cCCHHHHHHHH----HHHHHhCCC-----------eEEEECCHHHHHHHHHHHcCC------------------CCCCEE
Confidence 34555555555 677777753 368999999998888765421 012358
Q ss_pred EecCCcchhHHHHHHhCCCceEEEecCC-CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc
Q psy13453 635 YTSDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY 713 (764)
Q Consensus 635 ~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~-~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~ 713 (764)
+++..+|.+...++...|++++.+++++ ++.+|+++|++++++. +-+|+.+ +.+|...|+++|.++|+++
T Consensus 62 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~---~~~G~~~~~~~i~~l~~~~ 132 (352)
T cd00616 62 IVPSFTFVATANAILLLGATPVFVDIDPDTYNIDPELIEAAITPR------TKAIIPV---HLYGNPADMDAIMAIAKRH 132 (352)
T ss_pred EeCCcchHHHHHHHHHcCCeEEEEecCCCcCCcCHHHHHHhcCcC------CeEEEEE---CCCCCcCCHHHHHHHHHHc
Confidence 8999999999999999999999999987 7899999999988543 3355554 3579999999999999999
Q ss_pred CCEEEEeccccccccccchhhhhhcCCCcccEEEEc--CCccCCCCcC
Q psy13453 714 NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFN--THKWLLVNFD 759 (764)
Q Consensus 714 glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d--~HK~l~~P~~ 759 (764)
|+++++|+||+.+..+..+ .+.. .+|..+++ .|||+..+.+
T Consensus 133 ~i~li~D~a~~~g~~~~~~---~~~~--~~d~~~~S~~~~K~~~~~~g 175 (352)
T cd00616 133 GLPVIEDAAQALGATYKGR---KVGT--FGDAGAFSFHPTKNLTTGEG 175 (352)
T ss_pred CCeEEEECCCCCCCeECCE---Eccc--CcceeEEcCCCCCCCcccCc
Confidence 9999999999865543321 1111 13555555 5599965543
No 89
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.28 E-value=1e-10 Score=130.01 Aligned_cols=209 Identities=13% Similarity=0.000 Sum_probs=135.6
Q ss_pred CCCCCCccccccCCCCChHHHHHHHHHHhhccc--CccccCCch----HHHHHHHHHHHHHHHcCCCccccCCCCCCCcE
Q psy13453 518 THWQSPQFNAYFPTGSSYPSIVGDMLSGAFGLI--GFSWLSSPA----CTELEVLVMNWLGKALGLPEEFLNCSPGPGGG 591 (764)
Q Consensus 518 ~~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~n--~~~~~~sp~----~t~lE~~v~~~la~llG~p~~~~~~~~~~~~G 591 (764)
..|.+=.|+++-..+....+ +.+.+..+..+. ......+.. .+.+-.++.+.+++++|.+. .
T Consensus 7 ~~~~s~~YL~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~-----------~ 74 (370)
T PRK05937 7 IDFVTNDFLGFSRSDTLVHE-VEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE-----------A 74 (370)
T ss_pred EEeECCCccCCCCCHHHHHH-HHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe-----------E
Confidence 45777788888866444333 344444443221 112233333 66777788899999999854 2
Q ss_pred EEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHH
Q psy13453 592 IIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDAL 671 (764)
Q Consensus 592 vfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~L 671 (764)
++.++|+.+|+ ++..+ +.. +...|+++..+|.|+..+++.+....... +..|+++|
T Consensus 75 l~~~sG~~a~~-~~~~~----~~~--------------~~d~ii~d~~~H~sv~~~~~~~~~~~~~~-----~~~d~~~l 130 (370)
T PRK05937 75 FIVPSGYMANL-GLCAH----LSS--------------VTDYVLWDEQVHISVVYSLSVISGWHQSF-----RHNDLDHL 130 (370)
T ss_pred EEECChHHHHH-HHHHH----hCC--------------CCCEEEEEhhhhHHHHHHHHHcCCceEEe-----cCCCHHHH
Confidence 44455567775 32211 111 12367888999999999988764322222 34789999
Q ss_pred HHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhh--hhcCCCcccEEEEc
Q psy13453 672 LTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFDFN 749 (764)
Q Consensus 672 e~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~--~l~gie~aDSit~d 749 (764)
+++|++..+.+....+|+.+..++.+|.+-|+++|+++|+++|+++|||+||+.+.+... .+. ...+.+..+-+..+
T Consensus 131 ~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~-g~g~~~~~~~~~~~~~~~t 209 (370)
T PRK05937 131 ESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDD-GKGFCHSLGYENFYAVLVT 209 (370)
T ss_pred HHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCC-CCchHHhhCCCCCcEEEEe
Confidence 999986543333455677788899999999999999999999999999999996544321 110 01133333455677
Q ss_pred CCccCCCCcCceeeC
Q psy13453 750 THKWLLVNFDCSAMW 764 (764)
Q Consensus 750 ~HK~l~~P~~~g~l~ 764 (764)
++|.++ |.|+++++
T Consensus 210 lsK~~g-~~G~~vl~ 223 (370)
T PRK05937 210 YSKALG-SMGAALLS 223 (370)
T ss_pred chhhhh-cCceEEEc
Confidence 889776 78888764
No 90
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.28 E-value=4.5e-11 Score=133.93 Aligned_cols=169 Identities=17% Similarity=0.078 Sum_probs=114.2
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..+....+|+.+.+++++++|.+.. -++++|||+++..++.+.. . +...|+
T Consensus 59 ~~~~~~~l~~~~~~~~~~~~g~~~~----------~v~~~sgt~a~~~~l~~l~----~---------------~Gd~Vl 109 (402)
T cd00378 59 GCEYVDEIEDLAIERAKKLFGAEYA----------NVQPHSGSQANLAVYFALL----E---------------PGDTIM 109 (402)
T ss_pred CchHHHHHHHHHHHHHHHHhCCCce----------eeecCCcHHHHHHHHHHhc----C---------------CCCEEE
Confidence 4556678888899999999998642 3555567899887765431 1 112466
Q ss_pred ecCCcchhHHHH-----HHhCCCceEEEecCC---CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHH
Q psy13453 636 TSDQSNSSVEKS-----AIIGDVPVRQLRSDD---NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELG 707 (764)
Q Consensus 636 ~S~~aH~Sv~kA-----a~~lGl~v~~Vp~d~---~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa 707 (764)
+++.+|.+.... +...|.+++.++++. ++.+|+++|++++.+. .|-+|+.+. +.+|...|+++|+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~-----~~~~v~~~~--~~~~~~~~~~~I~ 182 (402)
T cd00378 110 GLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEF-----KPKLIVAGA--SAYPRPIDFKRFR 182 (402)
T ss_pred EecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhC-----CCCEEEecC--cccCCCcCHHHHH
Confidence 666666543221 445677777776642 6899999999998642 133444433 3457788999999
Q ss_pred HHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 708 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 708 ~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
++|++||+|+++|++|..+..........+. .+|.++.++|||+..|.+..++
T Consensus 183 ~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~---~~dv~~~s~sK~l~G~~gg~i~ 235 (402)
T cd00378 183 EIADEVGAYLLVDMAHVAGLVAGGVFPNPLP---GADVVTTTTHKTLRGPRGGLIL 235 (402)
T ss_pred HHHHhcCCEEEEEccchhhhhhcccCCCccc---CCcEEEeccccCCCCCCceEEE
Confidence 9999999999999997554443221111222 4599999999999777765554
No 91
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.28 E-value=1.5e-11 Score=139.23 Aligned_cols=157 Identities=15% Similarity=0.135 Sum_probs=114.4
Q ss_pred ccccCCcceeeeeHHHHHhhcCCCCCCeEEecC---CCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCch
Q psy13453 11 AYPSETLSLLIYESFKATHSLSGTPDQVRLSGL---PDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLN 86 (764)
Q Consensus 11 ~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpv---d~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~ 86 (764)
+|++.+ |+|+.||+.++|+++ +.||+ +++++||+++|+++|++.. . +.+++ ++|.+|+..|..|||+
T Consensus 155 I~p~~t----h~S~~kAi~~~G~~p---v~Vd~~~d~~~~~iD~e~Le~aIt~~~-~-kai~~Vv~Tp~t~~~g~~ddL~ 225 (444)
T TIGR03531 155 IWPRID----QKSCIKAISTAGFEP---RVIETVLDGDELTTDVEDIERAIEEIG-P-DNILCVLSTTSCFAPRSPDDIE 225 (444)
T ss_pred EEECcC----hHHHHHHHHHcCCeE---EEeeeeecCcCCCcCHHHHHHHHHhcc-C-CCEEEEEEcCCcCCCcchhCHH
Confidence 677754 999999999999998 88985 4689999999999998532 1 23444 6888899999999999
Q ss_pred hhhc-----CCCceeccccccc--c------------------------------ceeeeecCCCccccccccccccCCc
Q psy13453 87 APVS-----NGPLKVGGVLRRV--Y------------------------------SSCLVPRGQKSLRTTVLFHFLFQHW 129 (764)
Q Consensus 87 ~ia~-----~~wlHVDa~l~~~--y------------------------------~s~ll~rd~~~l~~~~s~~~d~~d~ 129 (764)
+|++ ++|+|||++.... + +++++.++++.+.. +.. .|
T Consensus 226 eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~-i~~--~y--- 299 (444)
T TIGR03531 226 EIAKICANYDIPHIVNNAYGLQSNKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQE-ISK--SY--- 299 (444)
T ss_pred HHHHHHHHcCCEEEEECcCcCcChhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHH-HHH--hc---
Confidence 9987 9999999965311 0 01122222221110 000 01
Q ss_pred ccCCC-CcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEeCCC
Q psy13453 130 QIPLG-RRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDD---RFELVCPP 184 (764)
Q Consensus 130 tle~S-Rr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p---~~ell~~P 184 (764)
.+. ....++++|++++.+|.+||++++++..++++++.+.|++.. +.+++..|
T Consensus 300 --~g~~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~ 356 (444)
T TIGR03531 300 --PGRASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTP 356 (444)
T ss_pred --cCCCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCC
Confidence 111 234678999999999999999999999999999999998853 56777554
No 92
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.27 E-value=1.5e-10 Score=129.15 Aligned_cols=165 Identities=14% Similarity=0.025 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
+..++.+.+++++|.+ ..++++||++||..++.+. .. +...|++++.+|.
T Consensus 84 ~~~~le~~ia~~~g~~-----------~~ii~~~~~~a~~~~~~~l----~~---------------~gd~vi~~~~~~~ 133 (393)
T TIGR01822 84 IHKELEAKIAAFLGTE-----------DTILYASCFDANGGLFETL----LG---------------AEDAIISDALNHA 133 (393)
T ss_pred HHHHHHHHHHHHhCCC-----------cEEEECchHHHHHHHHHHh----CC---------------CCCEEEEeccccH
Confidence 3344556788888864 2577789999988554322 11 1235788999999
Q ss_pred hHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEecc
Q psy13453 643 SVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAA 722 (764)
Q Consensus 643 Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA 722 (764)
|...++...+.....++ .+|+++|+++|++..+.+..+.+|+...-.+.+|.+.|+++|+++|++||+||++|++
T Consensus 134 s~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~ 208 (393)
T TIGR01822 134 SIIDGVRLCKAKRYRYA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDEC 208 (393)
T ss_pred HHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECC
Confidence 99998888877654432 4899999999987544444566777666678899999999999999999999999999
Q ss_pred ccccccccc-hhhhhhcCC-CcccEEEEcCCccCCCCcCceee
Q psy13453 723 YAGSALLLP-EYAHLKRGL-EYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 723 ~Gg~~l~~~-~~r~~l~gi-e~aDSit~d~HK~l~~P~~~g~l 763 (764)
|+.+.+... ..-....++ ..+|.++.++||+++.+ ..|++
T Consensus 209 ~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~-r~G~~ 250 (393)
T TIGR01822 209 HATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGA-SGGFT 250 (393)
T ss_pred ccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCC-CcEEE
Confidence 975443211 000011222 25799999999998754 34654
No 93
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.26 E-value=1.4e-10 Score=129.87 Aligned_cols=189 Identities=13% Similarity=0.084 Sum_probs=132.6
Q ss_pred HHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhh
Q psy13453 537 SIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHW 616 (764)
Q Consensus 537 ~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~ 616 (764)
..+.+.+...+......|...+....+++.+.+++.+.+|.+-+ ....++|+|+|+++..++.+.. .
T Consensus 49 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-------~~~i~~t~G~~~al~~~~~~l~----~-- 115 (391)
T PRK08361 49 KNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVD-------VDNVIVTAGAYEATYLAFESLL----E-- 115 (391)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC-------cccEEEeCChHHHHHHHHHHhc----C--
Confidence 33444444444433334545566778888899998888775321 1367899999999877665331 1
Q ss_pred ccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeecc
Q psy13453 617 QSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGT 694 (764)
Q Consensus 617 ~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGT 694 (764)
++..|++.+-+|.+....+...|++++.+|+++ ++.+|+++|++.+++. +-+|+.+..+
T Consensus 116 -------------~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~------~~~v~i~~p~ 176 (391)
T PRK08361 116 -------------EGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKR------TRMIVINYPN 176 (391)
T ss_pred -------------CCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccc------cEEEEEeCCC
Confidence 122477788889999999999999999999975 4579999999988753 3366777889
Q ss_pred CCcccccc---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 695 TGTCAFDN---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 695 T~~GaiDp---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+.+|.+-| +++|+++|+++++++++|.+|+.+..-.............-+-++.+++|.++.|
T Consensus 177 NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~ 242 (391)
T PRK08361 177 NPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMT 242 (391)
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCc
Confidence 99999988 8889999999999999999997653321111111111112356789999988766
No 94
>KOG0630|consensus
Probab=99.26 E-value=9.3e-11 Score=128.24 Aligned_cols=251 Identities=14% Similarity=0.092 Sum_probs=166.3
Q ss_pred ccccCCcc--eeeeeHHHHHhhcCCCCCCeEEecCCC----CCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCccccccc
Q psy13453 11 AYPSETLS--LLIYESFKATHSLSGTPDQVRLSGLPD----SEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQ 83 (764)
Q Consensus 11 ~~~~~~~~--~~~YSv~KAa~~LGl~~~~v~~Vpvd~----~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iD 83 (764)
.|.||-+- ++|| ||+-||+....|..++-.+ .||||...+++.|+++..+|++|++ ||..|++.+|..|
T Consensus 234 ~YiS~alh~~l~hY----aarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnD 309 (838)
T KOG0630|consen 234 FYISEALHMDLLHY----AAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQND 309 (838)
T ss_pred EEEcccccHHHHHH----HHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchH
Confidence 79999853 2334 7999999998888877754 4599999999999999999999999 7999999999999
Q ss_pred Cchhhhc------CCCceecccc-------------------------------ccccce-eeeecCCCccccccccccc
Q psy13453 84 SLNAPVS------NGPLKVGGVL-------------------------------RRVYSS-CLVPRGQKSLRTTVLFHFL 125 (764)
Q Consensus 84 pi~~ia~------~~wlHVDa~l-------------------------------~~~y~s-~ll~rd~~~l~~~~s~~~d 125 (764)
.|..+-+ ..|+|.-|.- ..+-.. ++|.|--..-. ..
T Consensus 310 mi~kildi~eahakfWLHasGhaiAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV~LHRPleg~a------aS 383 (838)
T KOG0630|consen 310 MILKILDICEAHAKFWLHASGHAIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIVLLHRPLEGSA------AS 383 (838)
T ss_pred HHHHHHHHHHHhhheeEeeccchhhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceEEeeccccccc------ch
Confidence 9999776 6899988821 111111 12222111000 00
Q ss_pred cCCcccCCCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC----------------C-----
Q psy13453 126 FQHWQIPLGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCP----------------P----- 184 (764)
Q Consensus 126 ~~d~tle~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~----------------P----- 184 (764)
-..-..-.+|+.++|.+|.+++++|+..+.++++..+.++..+.+...+++++++++- |
T Consensus 384 afesdpi~rekLdaLp~Wta~q~LggKaIadmienAFll~kilfe~aSa~~eiemig~dn~aelaarl~dn~~sPfdvqa 463 (838)
T KOG0630|consen 384 AFESDPILREKLDALPLWTALQALGGKAIADMIENAFLLCKILFEGASACEEIEMIGHDNGAELAARLSDNIFSPFDVQA 463 (838)
T ss_pred hcccChHHHHhhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcCCceeEeccCCHHHHHHHHhhccCCcchHhh
Confidence 1111223568999999999999999999999999999999999999999999999862 1
Q ss_pred ----CceeEEEEeeccc-----cccc--------cccccCcc--------CCccHHHHHHHHHHHhcCcEEEEec-eeC-
Q psy13453 185 ----SMGLVCFRLKVRF-----WDKL--------DNLFGTIS--------FGDNDLNKAVYDRIIARKVIYIVKG-SFQ- 237 (764)
Q Consensus 185 ----~l~iV~Fry~P~~-----~~~~--------~~~~~~~~--------~~~d~~n~~L~~~L~~~G~~~vs~t-~l~- 237 (764)
.-.+|++.+...- .++. ++.-+... +.-|++|.+|.+-|+.+---|---+ ...
T Consensus 464 lfdaaaPtVai~~~~~tsIk~a~q~hkaaaaaaddedA~aiaeke~~deaeY~D~LNaWL~d~Llpd~~~f~fdtIE~~g 543 (838)
T KOG0630|consen 464 LFDAAAPTVAIFFDGSTSIKLAGQGHKAAAAAADDEDAEAIAEKEKIDEAEYFDRLNAWLGDGLLPDCLNFDFDTIEHGG 543 (838)
T ss_pred hhcccCCeEEEEecCceeeeccccccHHHHhhccccchhhcchhhhcchHHHHHHHHHHHhcccccCCCCCCceeeecCC
Confidence 1245665443211 1110 00000000 1125566666666654422110001 111
Q ss_pred -CeeEEEEeccCC-----CCCHHHHHHHHHHHHHHHHHHH
Q psy13453 238 -DRLFMRFAICSS-----QTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 238 -g~~~LRi~v~np-----~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
-..++|+|-... -...+++++|.+.++.+.+.+.
T Consensus 544 n~GiafRfCPLEhgaae~pphidhlerFaqkLea~m~Ile 583 (838)
T KOG0630|consen 544 NHGIAFRFCPLEHGAAEQPPHIDHLERFAQKLEAHMDILE 583 (838)
T ss_pred ccceeEEecccccccccCCCchHHHHHHHHHHHHHHHHHH
Confidence 146899987544 2345899999998888776554
No 95
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.24 E-value=1.6e-10 Score=127.93 Aligned_cols=221 Identities=11% Similarity=0.019 Sum_probs=149.6
Q ss_pred ccccCCcceeeee----HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCch
Q psy13453 11 AYPSETLSLLIYE----SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLN 86 (764)
Q Consensus 11 ~~~~~~~~~~~YS----v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~ 86 (764)
+..++. .|+| +.++++.+|+.. +.||+++++++|+++|+++|.++ +.+++.+.+++++|.++|++
T Consensus 91 vl~~~~---~~~~~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~l~~~-----~~~v~~~~~~~~tG~~~~~~ 159 (373)
T cd06453 91 IVTSVM---EHHSNIVPWQQLAERTGAKL---KVVPVDDDGQLDLEALEKLLTER-----TKLVAVTHVSNVLGTINPVK 159 (373)
T ss_pred EEECcc---hhHHHHHHHHHHHhhcCcEE---EEeecCCCCCcCHHHHHHHhcCC-----ceEEEEeCcccccCCcCCHH
Confidence 444444 5666 456677888866 99999999999999999999752 33556788899999999999
Q ss_pred hhhc-----CCCceeccccc--------------------cc----c-ceeeeecCCCcccccccc---c--------cc
Q psy13453 87 APVS-----NGPLKVGGVLR--------------------RV----Y-SSCLVPRGQKSLRTTVLF---H--------FL 125 (764)
Q Consensus 87 ~ia~-----~~wlHVDa~l~--------------------~~----y-~s~ll~rd~~~l~~~~s~---~--------~d 125 (764)
++++ ++|+|+|++.. ++ . +++++.++. .... +.. . .+
T Consensus 160 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~g~g~~~~~~~-~~~~-~~~~~~g~~~~~~~~~~ 237 (373)
T cd06453 160 EIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKMLGPTGIGVLYGKEE-LLEE-MPPYGGGGEMIEEVSFE 237 (373)
T ss_pred HHHHHHHHcCCEEEEEhhhhcCceeeeccccCCCEEEeccccccCCCCcEEEEEchH-Hhhc-CCCeecCCCcccccccc
Confidence 9876 88999998431 11 0 123333221 1100 000 0 00
Q ss_pred cCCcc-----cC-CCC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC--CceeEEEEeecc
Q psy13453 126 FQHWQ-----IP-LGR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP--SMGLVCFRLKVR 196 (764)
Q Consensus 126 ~~d~t-----le-~SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P--~l~iV~Fry~P~ 196 (764)
...|. .+ ++. ....+.+|.+++.+..+|+.+++++..++++++.+.++++++++++.++ ..++++|+..
T Consensus 238 ~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-- 315 (373)
T cd06453 238 ETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLE-- 315 (373)
T ss_pred ccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEEC--
Confidence 01111 11 122 3346788999999999999999999999999999999999999998643 4668888752
Q ss_pred ccccccccccCccCCccHHHHHHHHHHHhcCcEEEEece--------eCCeeEEEEeccCCCCCHHHHHHHHHHH
Q psy13453 197 FWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGS--------FQDRLFMRFAICSSQTEESDVQLGWNEI 263 (764)
Q Consensus 197 ~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~--------l~g~~~LRi~v~np~Tt~e~i~~~l~~l 263 (764)
+.+ ..++.++|.+.|+.+..... ......+|+++. +.++.++++.+++.|
T Consensus 316 --------------~~~--~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~-~~~t~~di~~~~~~l 373 (373)
T cd06453 316 --------------GIH--PHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFG-LYNTEEEIDALVEAL 373 (373)
T ss_pred --------------CcC--HHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEec-CCCCHHHHHHHHhhC
Confidence 111 14688888888876433221 112458999654 678899999998753
No 96
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.23 E-value=1.1e-10 Score=131.47 Aligned_cols=168 Identities=15% Similarity=0.076 Sum_probs=114.5
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEe
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT 636 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~ 636 (764)
.+....+|+.+.+++++++|.+.. -+++++||+++..++.+. .. ++..|++
T Consensus 66 ~~~~~~~e~~~~~~la~~~g~~~~----------~i~~~sgt~al~~~l~~l----~~---------------~gd~Vl~ 116 (416)
T PRK00011 66 CEYVDVVEQLAIDRAKELFGAEYA----------NVQPHSGSQANAAVYFAL----LK---------------PGDTILG 116 (416)
T ss_pred chHHHHHHHHHHHHHHHHhCCCce----------eeecCCchHHHHHHHHHh----cC---------------CCCEEEE
Confidence 345677888899999999998652 244456788877665433 11 1224777
Q ss_pred cCCcchhHHH---HH--HhCCCceEEEecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHH
Q psy13453 637 SDQSNSSVEK---SA--IIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPIC 710 (764)
Q Consensus 637 S~~aH~Sv~k---Aa--~~lGl~v~~Vp~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~ 710 (764)
+..+|.+... .. ...|.+++.++++ +++.+|+++|+++|++. .|-+|+.+ .+.+|...|+++|+++|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~-----~~k~v~~~--~~~~~~~~~~~~I~~la 189 (416)
T PRK00011 117 MDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEH-----KPKLIIAG--ASAYSRPIDFKRFREIA 189 (416)
T ss_pred eccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhc-----CCCEEEEC--CCcCCCccCHHHHHHHH
Confidence 7778765321 11 2235677888887 46899999999999752 13244433 34678778999999999
Q ss_pred HhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 711 QEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 711 ~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
++||+++++|+||+.+......+...+. .+|.++.++||++..|.+..++
T Consensus 190 ~~~~~~livD~a~~~g~~~~g~~~~~~~---~~di~~~S~~K~l~g~~gg~i~ 239 (416)
T PRK00011 190 DEVGAYLMVDMAHIAGLVAAGVHPSPVP---HADVVTTTTHKTLRGPRGGLIL 239 (416)
T ss_pred HHcCCEEEEECcchhcccccCccCCCCC---CCcEEEecCCcCCCCCCceEEE
Confidence 9999999999998765443222122222 5699999999999777765543
No 97
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.23 E-value=1.7e-10 Score=132.37 Aligned_cols=170 Identities=19% Similarity=0.129 Sum_probs=115.5
Q ss_pred chHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEec
Q psy13453 558 PACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTS 637 (764)
Q Consensus 558 p~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S 637 (764)
....++|..+.+..+++|+...... ...+=+.+|+.||+.++.+... +...|++.
T Consensus 76 ~~~d~lE~~~~~~~~~~f~~~~~~~------~~nv~~~SG~~AN~av~~aL~~-------------------pgD~Il~~ 130 (475)
T PLN03226 76 EYIDQIETLCQKRALEAFRLDPEKW------GVNVQPLSGSPANFAVYTALLQ-------------------PHDRIMGL 130 (475)
T ss_pred hhHHHHHHHHHHHHHHHhCCCccee------EEecCcCchHHHHHHHHHHhCC-------------------CCCEEEEC
Confidence 4668899999999999998865311 0011137889999887765411 12245542
Q ss_pred C------CcchhHHHHHHhCCCc--eEEE--ecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHH
Q psy13453 638 D------QSNSSVEKSAIIGDVP--VRQL--RSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEEL 706 (764)
Q Consensus 638 ~------~aH~Sv~kAa~~lGl~--v~~V--p~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eI 706 (764)
+ .+|-+....+++.+.. +..+ +.+ ++|.+|+++|++.+.+. .|-+|++ |.+++|..-|+++|
T Consensus 131 d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~-----~pklIv~--~~S~~s~~~D~a~i 203 (475)
T PLN03226 131 DLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLF-----RPKLIIA--GASAYPRDWDYARM 203 (475)
T ss_pred CCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhc-----CCeEEEE--ecCcCCCccCHHHH
Confidence 2 4455554444433332 2222 334 67999999999998653 2434444 34568888899999
Q ss_pred HHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 707 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 707 a~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+++|++||++|+||+||+.+++...-+... ++.+|.++.++||||+.|.| |++
T Consensus 204 ~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p---~~~~Div~~t~hK~L~GP~G-g~I 256 (475)
T PLN03226 204 RKIADKVGALLMCDMAHISGLVAAQEAASP---FEYCDVVTTTTHKSLRGPRG-GMI 256 (475)
T ss_pred HHHHHHcCCEEEEEchhhhCcccCCCCCCC---CCCCeEEEecCcccccCCCc-eEE
Confidence 999999999999999999988765432222 33679999999999988998 444
No 98
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.23 E-value=2.1e-10 Score=118.14 Aligned_cols=159 Identities=14% Similarity=0.147 Sum_probs=134.3
Q ss_pred HHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHH
Q psy13453 569 NWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSA 648 (764)
Q Consensus 569 ~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa 648 (764)
+.+++++|.+. .=+|.|+.++-+..|.+... +...+++...+||+-.-||
T Consensus 68 ~dlaeFlg~D~-----------~R~t~GARe~KfavMhal~~-------------------~gd~vV~D~~aHYttyvAA 117 (382)
T COG1103 68 EDLAEFLGMDE-----------VRVTAGAREAKFAVMHALCK-------------------EGDWVVVDSLAHYTTYVAA 117 (382)
T ss_pred HHHHHHhCCce-----------eeecccchhhHHHHHHHhcc-------------------CCCEEEEcCcchHHHHHHH
Confidence 34899999975 35899999998777653211 1235788999999999999
Q ss_pred HhCCCceEEEecC--CCCcccHHHHHHHHHHhhhcC-CCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccc
Q psy13453 649 IIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKG-LIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAG 725 (764)
Q Consensus 649 ~~lGl~v~~Vp~d--~~g~md~~~Le~~I~~~~~~G-~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg 725 (764)
...|++|..||-. .+++++++...+.|++-.++| ..|.+...|.....+|.+.|-..+++||++||++|.+.+||..
T Consensus 118 Eragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~ 197 (382)
T COG1103 118 ERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTV 197 (382)
T ss_pred HhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceee
Confidence 9999999999964 678999999999999887776 7788999999999999999999999999999999999999988
Q ss_pred cccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 726 SALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 726 ~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+-+...- +-+ .||.|.-|+||.|.+.-.||+|
T Consensus 198 Grmpvs~-----ke~-g~DFiVgSGHKsmAAs~PiGvl 229 (382)
T COG1103 198 GRMPVSG-----KEI-GADFIVGSGHKSMAASAPIGVL 229 (382)
T ss_pred ccccccc-----ccc-CCCEEEecCccchhccCCeeEE
Confidence 7554421 122 5899999999999999999986
No 99
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.21 E-value=1.6e-10 Score=125.99 Aligned_cols=170 Identities=18% Similarity=0.222 Sum_probs=135.6
Q ss_pred chHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEe-CChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEe
Q psy13453 558 PACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQ-STASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT 636 (764)
Q Consensus 558 p~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfT-sGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~ 636 (764)
....+|-.++-+||+++-|++. ..++ ..|+++-++++++.|.....+ +...+-++++
T Consensus 105 qG~l~li~~Lq~~L~~ITG~Da-----------vsLQP~AGAqGE~aGll~Ir~YHe~r-----------G~~~R~~~LI 162 (496)
T COG1003 105 QGYLELIYELQEWLKEITGMDA-----------VSLQPNAGAQGEYAGLLAIRAYHESR-----------GEGHRNICLI 162 (496)
T ss_pred HHHHHHHHHHHHHHHHhcCCce-----------eeccCCCCcchhhHHHHHHHHHHHHc-----------CCCcCcEEEe
Confidence 3556788889999999999976 2343 467788899999888765433 1123557899
Q ss_pred cCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc-cHHHHHHHHHhcCC
Q psy13453 637 SDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD-NLEELGPICQEYNI 715 (764)
Q Consensus 637 S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD-pl~eIa~i~~~~gl 715 (764)
.+.+|-...-+|.+.|++|+.|+||++|.+|+++|++++.++.+ ++.+|-.+| .|.|. +|.||++|.+++|-
T Consensus 163 P~SAHGTNPASAam~G~~VV~V~~~~~G~VDlddLk~k~~~~~A------alMiTnPsT-~GvFE~~I~ei~~ivH~~Gg 235 (496)
T COG1003 163 PDSAHGTNPASAAMAGFKVVVVKCDENGNVDLDDLRAKAEDNLA------ALMITNPST-LGVFEEDIREICEIVHEAGG 235 (496)
T ss_pred eccccCCChhhHhhcCceEEEEecCCCCCccHHHHHHHhcccee------EEEeccCcc-cccchhhHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999986644 888999988 58884 99999999999999
Q ss_pred EEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCce
Q psy13453 716 WLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCS 761 (764)
Q Consensus 716 wLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g 761 (764)
.+..|||---+.+ ...|.--- .+|-+-+|.||.+.+|.|-|
T Consensus 236 ~vY~DGANlNA~v--G~~rPGd~---G~DV~HlNLHKTF~iPHGGG 276 (496)
T COG1003 236 QVYYDGANLNAIV--GLARPGDM---GFDVVHLNLHKTFCIPHGGG 276 (496)
T ss_pred EEEecCcchhhhh--cccccccc---ccceEEeecccccccCCCCC
Confidence 9999998432211 11122112 45999999999999999866
No 100
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.19 E-value=5.9e-10 Score=124.95 Aligned_cols=220 Identities=10% Similarity=0.046 Sum_probs=150.7
Q ss_pred eHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceec
Q psy13453 23 ESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVG 97 (764)
Q Consensus 23 Sv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVD 97 (764)
.+.++++..|... +.||+++++++|+++|+++|+++ +-+++-+.+++++|.+.|+++|++ ++|+|||
T Consensus 124 ~~~~~~~~~g~~~---~~v~~~~~~~~~~~~l~~~i~~~-----~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD 195 (403)
T TIGR01979 124 PWQLLAERTGATL---KFIPLDDDGTLDLDDLEKLLTEK-----TKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVD 195 (403)
T ss_pred HHHHHHHhcCcEE---EEEecCCCCCCCHHHHHHHhccC-----CeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEE
Confidence 3568888999877 99999999999999999999753 224467888999999999999876 8899999
Q ss_pred ccc--------------------cccc----c-eeeeecCCCccccc--cccc------cccC--C-----cccC-CCCc
Q psy13453 98 GVL--------------------RRVY----S-SCLVPRGQKSLRTT--VLFH------FLFQ--H-----WQIP-LGRR 136 (764)
Q Consensus 98 a~l--------------------~~~y----~-s~ll~rd~~~l~~~--~s~~------~d~~--d-----~tle-~SRr 136 (764)
++. ++++ + ++++.+.. .+... +... ++.. . +.++ ++..
T Consensus 196 ~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~g~l~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~ 274 (403)
T TIGR01979 196 GAQAVPHMPVDVQALDCDFYVFSGHKMYGPTGIGVLYGKEE-LLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPN 274 (403)
T ss_pred chhhcCccccCccccCCCEEEEecccccCCCCceEEEEchH-HHhcCCCeecCCCceeecccCccccCCChhhcCCCCcc
Confidence 942 1111 1 34444322 11100 0000 0000 0 1122 2332
Q ss_pred c-cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC----ceeEEEEeeccccccccccccCccCC
Q psy13453 137 F-RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS----MGLVCFRLKVRFWDKLDNLFGTISFG 211 (764)
Q Consensus 137 ~-~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~----l~iV~Fry~P~~~~~~~~~~~~~~~~ 211 (764)
. ..+.++++++.+...|+.++.++..++++++.+.++++++++++.+++ .++++|++..
T Consensus 275 ~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~---------------- 338 (403)
T TIGR01979 275 IAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEG---------------- 338 (403)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCC----------------
Confidence 2 345779999888877899999999999999999999999999987643 6799998631
Q ss_pred ccHHHHHHHHHHHhcCcEEEEec--------eeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 212 DNDLNKAVYDRIIARKVIYIVKG--------SFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 212 ~d~~n~~L~~~L~~~G~~~vs~t--------~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
.+ ...+.+.|.+.|...-... .+....++|+++ ...++++|++.+++.|+++.+.+
T Consensus 339 ~~--~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~-~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 339 VH--PHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASF-YIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred cC--HHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEe-ccCCCHHHHHHHHHHHHHHHHHh
Confidence 11 2356778888886443211 111235799974 46678999999999999877653
No 101
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.19 E-value=3e-10 Score=129.05 Aligned_cols=151 Identities=15% Similarity=0.085 Sum_probs=113.6
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|...++|+ .++++.|... .++|++||+|+.+++.+. .. +...|+
T Consensus 62 ~~p~~~~le~----~lA~l~g~~~-----------av~~sSGt~Al~~al~~l----l~---------------~Gd~Vi 107 (433)
T PRK08134 62 SNPTVAVLEE----RVAALEGGVG-----------AIATASGQAALHLAIATL----MG---------------AGSHIV 107 (433)
T ss_pred cChHHHHHHH----HHHHHhCCCc-----------EEEeCCHHHHHHHHHHHH----hC---------------CCCEEE
Confidence 4566666665 6677777532 589999999988877643 11 112578
Q ss_pred ecCCcchhHHHHH----HhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~Sv~kAa----~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...|.+..... ...|+.++.++++ |+++|+++|++.+ -+|+....++.+|.+-||++|+++|+
T Consensus 108 ~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-----d~~~l~~~i~~~T------klV~~e~~~np~g~v~Di~~I~~la~ 176 (433)
T PRK08134 108 ASSALYGGSHNLLHYTLRRFGIETTFVKPG-----DIDGWRAAIRPNT------RLLFGETLGNPGLEVLDIPTVAAIAH 176 (433)
T ss_pred EeCCccHHHHHHHHHHHhhCCeEEEEECCC-----CHHHHHHhcCCCC------eEEEEECCCcccCcccCHHHHHHHHH
Confidence 8888887664443 3478888888875 7999999997653 37777778889999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~ 758 (764)
++|++++||++|+.+....|. . - .||.++.|.|||++.+-
T Consensus 177 ~~gi~livD~t~a~~~~~~pl-~---~---GaD~vv~S~tK~l~g~g 216 (433)
T PRK08134 177 EAGVPLLVDSTFTTPYLLRPF-E---H---GADLVYHSATKFLGGHG 216 (433)
T ss_pred HcCCEEEEECCCcccccCCch-h---c---CCCEEEeccccccCCCC
Confidence 999999999999887654331 1 1 46999999999998654
No 102
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.18 E-value=9e-10 Score=126.05 Aligned_cols=173 Identities=19% Similarity=0.235 Sum_probs=119.6
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 552 FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 552 ~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
..|..++...++++.+.+++ |.. ..++|+|||+|+..++.+. .. .++
T Consensus 72 ~~Y~~~~g~~~Lreaia~~~----~~~-----------~vv~t~ggt~A~~~~~~al----l~--------------pGD 118 (460)
T PRK13238 72 EAYAGSRSYYRLEDAVKDIF----GYP-----------YTIPTHQGRAAEQILFPVL----IK--------------KGD 118 (460)
T ss_pred cccCCCCCHHHHHHHHHHHh----CCC-----------cEEECCCHHHHHHHHHHHh----CC--------------CCC
Confidence 45777888888888655555 442 3699999999998876542 11 113
Q ss_pred eEEEecCCcchhHHHH-HHhCCCceEEEecCC--------C--CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcc--
Q psy13453 632 LVAYTSDQSNSSVEKS-AIIGDVPVRQLRSDD--------N--GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTC-- 698 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kA-a~~lGl~v~~Vp~d~--------~--g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~G-- 698 (764)
|+++ ..||....+ ....|..++.+|+++ . |.||+++|++.|.+... .++-+|+++..++.+|
T Consensus 119 --Vii~-~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~--~~tk~Ivl~~p~NptGG~ 193 (460)
T PRK13238 119 --VVPS-NYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGA--ENVPFIVMTITNNSAGGQ 193 (460)
T ss_pred --EEcc-CCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCC--CceeEEEEecCCCCCCCc
Confidence 3444 447766555 567899999999863 2 44999999999975321 2355788888888887
Q ss_pred --ccccHHHHHHHHHhcCCEEEEeccccc-cccccch----hhh-hhcC-----CCcccEEEEcCCccCCCCcCceee
Q psy13453 699 --AFDNLEELGPICQEYNIWLHVDAAYAG-SALLLPE----YAH-LKRG-----LEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 699 --aiDpl~eIa~i~~~~glwLHVDaA~Gg-~~l~~~~----~r~-~l~g-----ie~aDSit~d~HK~l~~P~~~g~l 763 (764)
..+++++|+++|++||+|++.|+|+.. .+++..+ ++. .+.. .+.+|++++++||.+++|.| |++
T Consensus 194 v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i 270 (460)
T PRK13238 194 PVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-GLL 270 (460)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-eEE
Confidence 246789999999999999999998743 2333211 111 0111 24589999999999999986 554
No 103
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.18 E-value=7.8e-11 Score=130.45 Aligned_cols=192 Identities=11% Similarity=-0.035 Sum_probs=130.3
Q ss_pred ccCCCCChHHHHHHHHHHhh----cccCccccCC---chHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCC-hHH
Q psy13453 528 YFPTGSSYPSIVGDMLSGAF----GLIGFSWLSS---PACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQST-ASE 599 (764)
Q Consensus 528 ~~~~~~~~~~~lad~l~~~l----N~n~~~~~~s---p~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsG-gTe 599 (764)
|.+++...+.-+.+.+...+ |.....+..+ +.+.++-.++++.++++||.+++ ...+||+| ||+
T Consensus 3 ~~pGp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~--------~~vvf~~gs~T~ 74 (355)
T cd00611 3 FSAGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDN--------YKVLFLQGGATG 74 (355)
T ss_pred CCCCCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC--------ceEEEEcCCchH
Confidence 44555555555555555554 6666777777 67779999999999999998543 46789988 999
Q ss_pred HHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcc-c-HHHHHHHHHH
Q psy13453 600 ATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVL-R-GDALLTAVKE 677 (764)
Q Consensus 600 ANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~m-d-~~~Le~~I~~ 677 (764)
++-.++..- ... ..+..+|+++.-.|.+.. -++..|+.++.++++++|.. + ++..+..+.+
T Consensus 75 a~~~~~~~l----~~~------------~~~~~~i~~g~~~~~~~~-~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~ 137 (355)
T cd00611 75 QFAAVPLNL----LGD------------KGTADYVVTGAWSAKAAK-EAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAP 137 (355)
T ss_pred HHHHHHHhc----CCC------------CCeEEEEECCHHHHHHHH-HHHhcCCCcEEEecccccCCCCCCCHhhcCCCC
Confidence 865554422 110 012346777777776633 44566899999998766543 5 3333333332
Q ss_pred hhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 678 DLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 678 ~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+ +-+|+.|..+|.+|.. + .++++.||+.+.|||++..+....+--+ + |....+.||+++ |
T Consensus 138 ~------~~lV~~~h~~t~tG~~--~---~~i~~~~g~~~~VDa~qs~g~~~idv~~-----~---~~~~ss~~K~lG-P 197 (355)
T cd00611 138 D------AAYVHYCSNETIHGVE--F---DEVPDTGGVPLVADMSSNILSRPIDVSK-----F---GVIYAGAQKNLG-P 197 (355)
T ss_pred C------CCEEEEeCCcccccEE--c---ceecccCCCeEEEEccccccCCCCCHHH-----h---CEEEeecccccC-C
Confidence 2 3489999999999997 2 2456669999999999999887664211 2 434455999876 9
Q ss_pred cCceeeC
Q psy13453 758 FDCSAMW 764 (764)
Q Consensus 758 ~~~g~l~ 764 (764)
.|.|++|
T Consensus 198 ~G~g~l~ 204 (355)
T cd00611 198 AGVTVVI 204 (355)
T ss_pred CceEEEE
Confidence 9999985
No 104
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.16 E-value=9.4e-10 Score=122.94 Aligned_cols=157 Identities=17% Similarity=0.121 Sum_probs=114.5
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
.+|...++|+ .+++++|.+ ..++|+|||+|+.+++.+.. . .++-.|+
T Consensus 31 ~g~~~~~le~----~la~~~g~~-----------~~v~~~sgt~al~lal~al~---~---------------~~Gd~Vi 77 (379)
T PRK11658 31 TGPKNQALEQ----AFCQLTGNQ-----------HAIAVSSATAGMHITLMALG---I---------------GPGDEVI 77 (379)
T ss_pred CCHhHHHHHH----HHHHHhCCC-----------eEEEECCHHHHHHHHHHHcC---C---------------CCCCEEE
Confidence 3666667776 455666653 25889999999888776431 0 1123578
Q ss_pred ecCCcchhHHHHHHhCCCceEEEecCCC-CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcC
Q psy13453 636 TSDQSNSSVEKSAIIGDVPVRQLRSDDN-GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYN 714 (764)
Q Consensus 636 ~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~-g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~g 714 (764)
+++.+|.+...++...|+.++.+++|.+ +.+|+++|+++|.+.. -+|+. +..+|...|+++|+++|++||
T Consensus 78 v~~~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~~t------kav~~---~~~~G~~~d~~~i~~~a~~~g 148 (379)
T PRK11658 78 TPSLTWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITPRT------KAIIP---VHYAGAPADLDAIRAIGERYG 148 (379)
T ss_pred ECCCcHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcccCC------eEEEE---eCCCCCcCCHHHHHHHHHHcC
Confidence 8999999999999999999999999854 5799999999986532 24443 334799999999999999999
Q ss_pred CEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc
Q psy13453 715 IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 715 lwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~ 758 (764)
+++++|+||+.+.....+. + |-...+.++++.+|.+..+-
T Consensus 149 i~vi~D~a~a~g~~~~~~~---~-g~~g~~~~Sf~~~K~l~~g~ 188 (379)
T PRK11658 149 IPVIEDAAHAVGTYYKGRH---I-GARGTAIFSFHAIKNITCAE 188 (379)
T ss_pred CeEEEECCCccCCeECCee---c-CCCCCEEEeCCCCCcCcccC
Confidence 9999999998654432211 1 11123788899999886643
No 105
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.15 E-value=1.4e-09 Score=122.08 Aligned_cols=220 Identities=12% Similarity=0.013 Sum_probs=153.6
Q ss_pred eeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCcee
Q psy13453 22 YESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKV 96 (764)
Q Consensus 22 YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHV 96 (764)
|.+.+.++..|... +.||++.++.+|+++++++|++++ -+++-+..+.++|.+-|+++|++ +++++|
T Consensus 124 ~~~~~~~~~~g~~v---~~v~~~~~~~~d~~~l~~~i~~~t-----~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~iv 195 (401)
T PRK10874 124 VPWLMVAQQTGAKV---VKLPLGADRLPDVDLLPELITPRT-----RILALGQMSNVTGGCPDLARAITLAHQAGMVVMV 195 (401)
T ss_pred HHHHHHHHHhCCEE---EEEecCCCCcCCHHHHHHhcCcCc-----EEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEE
Confidence 34677888899876 999999889999999999996532 24456888999999999999876 889999
Q ss_pred ccccc--------------------cc-c---c-eeeeecCCCccccc--ccc------ccccCCc-------ccC-CCC
Q psy13453 97 GGVLR--------------------RV-Y---S-SCLVPRGQKSLRTT--VLF------HFLFQHW-------QIP-LGR 135 (764)
Q Consensus 97 Da~l~--------------------~~-y---~-s~ll~rd~~~l~~~--~s~------~~d~~d~-------tle-~SR 135 (764)
|+... ++ | + ++++.+ ++.+... ... ..++.++ .++ |+.
T Consensus 196 D~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~ 274 (401)
T PRK10874 196 DGAQGAVHFPADVQALDIDFYAFSGHKLYGPTGIGVLYGK-SELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTP 274 (401)
T ss_pred ECCcccccccCCchhcCCCEEEEecccccCCCccEEEEEc-hHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCc
Confidence 99531 11 1 1 233332 2211110 000 0000011 111 222
Q ss_pred c-ccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccH
Q psy13453 136 R-FRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDND 214 (764)
Q Consensus 136 r-~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~ 214 (764)
. ...+.+.+++..+-..|+.+..++..++++++.+.|+++|+++++.+|..++++|++. +.+
T Consensus 275 ~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~----------------~~~- 337 (401)
T PRK10874 275 NVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQDSSLLAFDFA----------------GVH- 337 (401)
T ss_pred CHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEEC----------------CcC-
Confidence 2 2556888999988888999999999999999999999999999998888899999752 111
Q ss_pred HHHHHHHHHHhcCcEEEEecee--------CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 215 LNKAVYDRIIARKVIYIVKGSF--------QDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 215 ~n~~L~~~L~~~G~~~vs~t~l--------~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
..++.+.|.++|..+.+.... ....++|+++... ++++|++.+++.|+++.+.
T Consensus 338 -~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~-nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 338 -HSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPY-NTQSDVDALVNAVDRALEL 398 (401)
T ss_pred -HHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEeccc-CCHHHHHHHHHHHHHHHHH
Confidence 246778888888866554321 1235899987654 5899999999999987654
No 106
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.15 E-value=1.2e-09 Score=121.74 Aligned_cols=168 Identities=14% Similarity=0.030 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 560 CTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 560 ~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
...+.+++.+++++++|.++ .+++++|++++..++.+. .. +...|++.+.
T Consensus 85 ~~~l~~~l~~~la~~~g~~~-----------~i~~tsG~~a~~~~~~~l----~~---------------~gd~vi~~~~ 134 (397)
T PRK06939 85 TQDLHKELEEKLAKFLGTED-----------AILYSSCFDANGGLFETL----LG---------------KEDAIISDAL 134 (397)
T ss_pred CcHHHHHHHHHHHHHhCCCc-----------EEEEcChHHHHHHHHHHh----CC---------------CCCEEEEEhh
Confidence 45667788899999998643 344444588877665432 11 1235788999
Q ss_pred cchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEE
Q psy13453 640 SNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHV 719 (764)
Q Consensus 640 aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHV 719 (764)
+|++...++...|.+++.++. +|+++|++.+++....+..+.+|+...-.+.+|...++++|+++|++||+|+++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~ 209 (397)
T PRK06939 135 NHASIIDGVRLCKAKRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMV 209 (397)
T ss_pred hhHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEE
Confidence 999999999999988877764 589999999976443333466666555567789999999999999999999999
Q ss_pred ecccccccccc-chhhhhhcCC-CcccEEEEcCCccCCCCcCceee
Q psy13453 720 DAAYAGSALLL-PEYAHLKRGL-EYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 720 DaA~Gg~~l~~-~~~r~~l~gi-e~aDSit~d~HK~l~~P~~~g~l 763 (764)
|.+|+.+.+.. ........++ +.+|.++.++||+++.+ -.|++
T Consensus 210 De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~-r~G~v 254 (397)
T PRK06939 210 DDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGA-SGGYT 254 (397)
T ss_pred ECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCcc-CceEE
Confidence 99996332211 1101112233 24688999999999644 34654
No 107
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.15 E-value=1.6e-09 Score=120.96 Aligned_cols=164 Identities=16% Similarity=0.170 Sum_probs=116.9
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
.++...++|+. +++++|.+. .++++|||+|+.+++.+.. . .++-.|+
T Consensus 27 ~g~~~~~le~~----la~~~g~~~-----------~v~~~sgt~al~~~l~al~---~---------------~~Gd~Vi 73 (380)
T TIGR03588 27 QGPTVPAFEEA----LAEYVGAKY-----------AVAFNSATSALHIACLALG---V---------------GPGDRVW 73 (380)
T ss_pred CChhHHHHHHH----HHHHHCCCe-----------EEEEcCHHHHHHHHHHHcC---C---------------CCCCEEE
Confidence 35555566654 566666532 4677889999877765431 0 1123588
Q ss_pred ecCCcchhHHHHHHhCCCceEEEecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcC
Q psy13453 636 TSDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYN 714 (764)
Q Consensus 636 ~S~~aH~Sv~kAa~~lGl~v~~Vp~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~g 714 (764)
++..+|.+...++...|+.++.++++ +++.+|+++|+++|++.. ...+-+|+.+ +.+|...|+++|+++|++||
T Consensus 74 v~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~--~~~t~~v~~~---~~~G~~~~~~~i~~l~~~~~ 148 (380)
T TIGR03588 74 TTPITFVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAK--GKLPKAIVPV---DFAGKSVDMQAIAALAKKHG 148 (380)
T ss_pred eCCcchHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhccc--CCCceEEEEe---CCCCccCCHHHHHHHHHHcC
Confidence 89999999999999999999999997 468899999999997431 1123355443 34788899999999999999
Q ss_pred CEEEEeccccccccccchhhhhhcCCCcccEEEEcCC--ccCCCCcCc
Q psy13453 715 IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTH--KWLLVNFDC 760 (764)
Q Consensus 715 lwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~H--K~l~~P~~~ 760 (764)
+++++|+||+.+..+-. +. +...+.+|..++++| ||+..+-|.
T Consensus 149 ~~lI~D~a~a~g~~~~~--~~-~g~~~~~d~~~~S~~~~K~~~~~~GG 193 (380)
T TIGR03588 149 LKIIEDASHALGAEYGG--KP-VGNCRYADATVFSFHPVKIITTAEGG 193 (380)
T ss_pred CEEEEECCCcccCccCC--Ee-CCCccccceEEEecCCCCcccccCce
Confidence 99999999987654321 11 111124699999999 999877543
No 108
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.14 E-value=9.8e-10 Score=124.34 Aligned_cols=167 Identities=18% Similarity=0.099 Sum_probs=117.6
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEe
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT 636 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~ 636 (764)
.|...++|+.+.+.+++++|.+. .-+++++||.||+.++.+. .. +...|++
T Consensus 69 ~~~~~~lE~~~~~~la~l~g~~~----------alv~~~SG~~A~~~~l~al----~~---------------~GD~Vl~ 119 (416)
T PRK13034 69 CEFVDEVEALAIERAKQLFGCDY----------ANVQPHSGSQANGAVYLAL----LK---------------PGDTILG 119 (416)
T ss_pred ChHHHHHHHHHHHHHHHHhCCCc----------eEEecCCcHHHHHHHHHHh----cC---------------CCCEEEE
Confidence 47788999989999999998753 2255789999999887643 11 1236888
Q ss_pred cCCcchhH-HHHHHh--CCCce--EEEecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHH
Q psy13453 637 SDQSNSSV-EKSAII--GDVPV--RQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPIC 710 (764)
Q Consensus 637 S~~aH~Sv-~kAa~~--lGl~v--~~Vp~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~ 710 (764)
+...|.+. ...++. .+..+ +..+.+ ..+.+|+++|++.++.. .|-+|+. +++.+|..-|+++|.++|
T Consensus 120 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-----~~klVi~--~~~~~g~~~dl~~l~~la 192 (416)
T PRK13034 120 MSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEH-----KPKLIIA--GFSAYPRELDFARFREIA 192 (416)
T ss_pred cCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhc-----CCeEEEE--CCCccccccCHHHHHHHH
Confidence 99999873 322322 12222 233343 35679999999998642 2435543 234578888999999999
Q ss_pred HhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCcee
Q psy13453 711 QEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSA 762 (764)
Q Consensus 711 ~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~ 762 (764)
++||++++||+|++.+....+.+. ..+..+|.++.++|||+..|.|..+
T Consensus 193 ~~~g~~livD~Aha~G~~~~g~~~---~~~~~~Di~~~s~~K~l~g~~GG~v 241 (416)
T PRK13034 193 DEVGALLMVDMAHIAGLVAAGEHP---NPFPHAHVVTTTTHKTLRGPRGGMI 241 (416)
T ss_pred HHcCCEEEEeCcccccCcccCCCC---CCCCCceEEEEeCcccCCCCCCeEE
Confidence 999999999999998776654322 2334689999999999988887443
No 109
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.14 E-value=9e-10 Score=130.01 Aligned_cols=167 Identities=16% Similarity=0.154 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
.-.++-+..|++||.+.+| ++|.|.|.+|..++.++.. +.-.|++...+|-
T Consensus 196 ~i~eAe~~aA~~fgAd~ty----------fvvNGTS~~n~av~~a~~~-------------------~Gd~VLvdRN~HK 246 (713)
T PRK15399 196 PHLEAEEYIARTFGAEQSY----------IVTNGTSTSNKIVGMYAAP-------------------AGSTLLIDRNCHK 246 (713)
T ss_pred HHHHHHHHHHHHhCCCcEE----------EEeCChHHHHHHHHHHhcC-------------------CCCEEEeecccHH
Confidence 3445566789999998864 4778888889887775421 1236889999999
Q ss_pred hHHHHHHhCCCceEEEecCC-----CCcccH-----HHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh
Q psy13453 643 SVEKSAIIGDVPVRQLRSDD-----NGVLRG-----DALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE 712 (764)
Q Consensus 643 Sv~kAa~~lGl~v~~Vp~d~-----~g~md~-----~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~ 712 (764)
|+..++.+.|+..+.+++.- -|-|++ +.++++|++.... ++|..+++|.+ |..|.+-|+++|+++|
T Consensus 247 Sv~~aLilsga~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~-~~p~~vvit~p-TYdGi~yd~~~I~~~~-- 322 (713)
T PRK15399 247 SLAHLLMMSDVVPIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQA-QWPVHAVITNS-TYDGLLYNTDWIKQTL-- 322 (713)
T ss_pred HHHHHHHHcCCeeEEecccccccCCcCCCChhhccHHHHHHHHHhCCCc-CCceEEEEECC-CCCceeeCHHHHHHHh--
Confidence 99999999999888887642 234555 9999999876533 46888999998 5579999999999999
Q ss_pred cCCEE-EEeccccccccccchhhh--hhcCCCcccEE---EEcCCccCCCCcCceee
Q psy13453 713 YNIWL-HVDAAYAGSALLLPEYAH--LKRGLEYVDSF---DFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 713 ~glwL-HVDaA~Gg~~l~~~~~r~--~l~gie~aDSi---t~d~HK~l~~P~~~g~l 763 (764)
|+.+ |||-|||+.+.|.|.++. -+.+...+|.+ +-|.||.|.+-.++|.+
T Consensus 323 -g~~~ilvDEAhgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~i 378 (713)
T PRK15399 323 -DVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLI 378 (713)
T ss_pred -CCCEEEEeccchhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccccccchheee
Confidence 6665 999999999988886552 23333357888 99999999988777765
No 110
>KOG0630|consensus
Probab=99.13 E-value=1.3e-10 Score=127.10 Aligned_cols=196 Identities=19% Similarity=0.201 Sum_probs=137.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecC
Q psy13453 559 ACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSD 638 (764)
Q Consensus 559 ~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~ 638 (764)
.++-+--.+-.|+..||.+..+..+++.. ...|...-..++..+++.|.....+.... -.++........+++|+|+
T Consensus 162 ian~i~Gdanh~fgnLF~FAdsqiycsdP--aasfhadiadai~haVkLAikar~~~dhs-~eG~~afaa~aaPt~YiS~ 238 (838)
T KOG0630|consen 162 IANSISGDANHVFGNLFHFADSQIYCSDP--AASFHADIADAIGHAVKLAIKARCGGDHS-LEGGIAFAALAAPTFYISE 238 (838)
T ss_pred HHHhhccchHHHHHHHHhhcccccccCCc--hhhhhhhhhhHHHHHHHhhhhhccCCccc-cccccchHhhcCceEEEcc
Confidence 44445556778999999987653333222 23455555556666777666544332100 0111111123467899999
Q ss_pred CcchhH-HHHHHhCCCceEEEec--C-----CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHH
Q psy13453 639 QSNSSV-EKSAIIGDVPVRQLRS--D-----DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPIC 710 (764)
Q Consensus 639 ~aH~Sv-~kAa~~lGl~v~~Vp~--d-----~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~ 710 (764)
..|.-. ..+|+-+|+....|.+ | -.|+||...+++.|++|..+|++|+++++..|++..|..|.|.+|.+||
T Consensus 239 alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~ 318 (838)
T KOG0630|consen 239 ALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDIC 318 (838)
T ss_pred cccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHH
Confidence 999765 4568889994332222 2 2579999999999999999999999999999999999999999999999
Q ss_pred HhcC-CEEEEeccccccccccchhh-hhhcCCCcccEEEEcCCccCCCCc
Q psy13453 711 QEYN-IWLHVDAAYAGSALLLPEYA-HLKRGLEYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 711 ~~~g-lwLHVDaA~Gg~~l~~~~~r-~~l~gie~aDSit~d~HK~l~~P~ 758 (764)
++++ +|||.-| +|..++.|.+-. .+..-.+..||++++.--||++|-
T Consensus 319 eahakfWLHasG-haiAALt~aepnnil~HV~eqldSMal~ialWLGiPS 367 (838)
T KOG0630|consen 319 EAHAKFWLHASG-HAIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPS 367 (838)
T ss_pred HHhhheeEeecc-chhhheeecCcccchhHHHHHHhhccchhHHHhCCCC
Confidence 9997 9999988 566666664422 111223567999999999999984
No 111
>PRK04311 selenocysteine synthase; Provisional
Probab=99.13 E-value=2.9e-09 Score=121.67 Aligned_cols=156 Identities=13% Similarity=0.062 Sum_probs=108.0
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh--
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS-- 643 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S-- 643 (764)
.+.+.+++++|.+. .+++++|+.|++.++.+. .. +-.|++|+.+|++
T Consensus 131 ~~e~~lA~l~Gae~-----------a~vv~sgtaAl~l~l~~l-----~~---------------GdeVIvs~~e~~~~g 179 (464)
T PRK04311 131 ALAALLCALTGAED-----------ALVVNNNAAAVLLALNAL-----AA---------------GKEVIVSRGELVEIG 179 (464)
T ss_pred HHHHHHHHHhCCCe-----------EEEECCHHHHHHHHHHHh-----CC---------------CCEEEEcchhhhhcC
Confidence 56778899998743 578888998887766421 11 1247788877773
Q ss_pred ----HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCC--cc--ccccHHHHHHHHHhcCC
Q psy13453 644 ----VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTG--TC--AFDNLEELGPICQEYNI 715 (764)
Q Consensus 644 ----v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~--~G--aiDpl~eIa~i~~~~gl 715 (764)
+...+...|+.++.|+++ +..++++++++|.++++ +|+.+..++. +| ..-|+++|+++|++||+
T Consensus 180 gs~~i~~~~~~~G~~l~~v~~~--~~t~~~dle~aI~~~Tk------lV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi 251 (464)
T PRK04311 180 GAFRIPDVMRQAGARLVEVGTT--NRTHLRDYEQAINENTA------LLLKVHTSNYRIEGFTKEVSLAELAALGKEHGL 251 (464)
T ss_pred cchhhHHHHHHCCcEEEEECCC--CCCCHHHHHHhcCccCe------EEEEEcCCCccccccCCcCCHHHHHHHHHHcCC
Confidence 334556678888888764 45689999999976533 5655555553 44 56699999999999999
Q ss_pred EEEEeccccccc----c---ccchhhh-hhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 716 WLHVDAAYAGSA----L---LLPEYAH-LKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 716 wLHVDaA~Gg~~----l---~~~~~r~-~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+++||++.|... . ..|.... .-. .||.+++++|||++.|. +|+++
T Consensus 252 ~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~---GaDiv~fSg~K~LgGp~-~G~i~ 304 (464)
T PRK04311 252 PVVYDLGSGSLVDLSQYGLPDEPTVQELLAA---GVDLVTFSGDKLLGGPQ-AGIIV 304 (464)
T ss_pred eEEEECCCcccccchhccCCCCCchhhHHhc---CCcEEEecCcccccCCc-eEEEE
Confidence 999999755421 0 0111111 112 46999999999999995 78764
No 112
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.13 E-value=3.3e-09 Score=120.91 Aligned_cols=158 Identities=13% Similarity=0.043 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch-
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS- 642 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~- 642 (764)
-..+.+.+++++|.+. .+++++|+.|++.++.+ +.. +-.|++|+..|.
T Consensus 124 ~~~le~~lA~l~gae~-----------alvv~sg~aAi~l~l~~-----l~~---------------GdeVIvs~~e~v~ 172 (454)
T TIGR00474 124 YSHVEGLLCELTGAED-----------ALVVNNNAAAVLLALNT-----LAK---------------GKEVIVSRGELVE 172 (454)
T ss_pred HHHHHHHHHHHhCCCc-----------EEEECCHHHHHHHHHHH-----hCC---------------cCEEEECCChhhh
Confidence 3557788999998754 46778888888777632 111 124778877663
Q ss_pred -----hHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCC--cc--ccccHHHHHHHHHhc
Q psy13453 643 -----SVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTG--TC--AFDNLEELGPICQEY 713 (764)
Q Consensus 643 -----Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~--~G--aiDpl~eIa~i~~~~ 713 (764)
++...+...|+.++.++++ +..++++++++|.++++ +|+.+.-++. .| .+-|+++|+++|++|
T Consensus 173 ~ggs~~i~~~~~~~G~~~~~v~~~--~~~~l~dle~aI~~~T~------lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~ 244 (454)
T TIGR00474 173 IGGSFRIPDVMEQSGAKLVEVGTT--NRTHLKDYEDAITENTA------LLLKVHTSNYRIVGFTEEVSIAELVALGREH 244 (454)
T ss_pred hcchhhHHHHHHHcCCEEEEeCCC--CCCCHHHHHHhcCcCCE------EEEEEccCcccccCCCCCCCHHHHHHHHHHc
Confidence 3445566789988888764 45689999999976533 5555555554 35 477999999999999
Q ss_pred CCEEEEecccccccc-------ccchh-hhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 714 NIWLHVDAAYAGSAL-------LLPEY-AHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 714 glwLHVDaA~Gg~~l-------~~~~~-r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
|++++||++.|...- -.|.. +..-. .||-+++++|||++.|. +|+++
T Consensus 245 g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~---GaDiv~fSg~K~LgGp~-~G~i~ 299 (454)
T TIGR00474 245 GLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAA---GVDLVTFSGDKLLGGPQ-AGIIV 299 (454)
T ss_pred CCeEEEECCCcccccchhccCCCCcccccHhHc---CCCEEEecCccccCCCe-EEEEE
Confidence 999999987554200 01111 11112 46999999999999895 67764
No 113
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.13 E-value=2.4e-09 Score=118.63 Aligned_cols=219 Identities=8% Similarity=0.003 Sum_probs=148.8
Q ss_pred eeeeH----HHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----
Q psy13453 20 LIYES----FKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS----- 90 (764)
Q Consensus 20 ~~YSv----~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~----- 90 (764)
.|+|+ .+.++..|+.. +.||+++++.+|+++|++++++. +-+++.+.+++++|.+.|+++|.+
T Consensus 95 ~~~~~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~~~~~-----~~~v~~~~~~n~tG~~~~~~~i~~l~~~~ 166 (376)
T TIGR01977 95 EHNSVARPLECLKEQIGVEI---TIVKCDNEGLISPERIKRAIKTN-----TKLIVVSHASNVTGTILPIEEIGELAQEN 166 (376)
T ss_pred hhhHHHHHHHHHHHHcCcEE---EEEecCCCCCcCHHHHHHhcCCC-----CeEEEEECCCCCccccCCHHHHHHHHHHc
Confidence 45554 35667778876 89999988999999999999642 224467889999999999999876
Q ss_pred CCCceecccc--------------------ccc-----cc-eeeeecCCCcccccccccc----ccCCc------ccC-C
Q psy13453 91 NGPLKVGGVL--------------------RRV-----YS-SCLVPRGQKSLRTTVLFHF----LFQHW------QIP-L 133 (764)
Q Consensus 91 ~~wlHVDa~l--------------------~~~-----y~-s~ll~rd~~~l~~~~s~~~----d~~d~------tle-~ 133 (764)
+++++||++. .++ .+ +.+++++...+........ .+.+. .++ +
T Consensus 167 ~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 246 (376)
T TIGR01977 167 GIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESG 246 (376)
T ss_pred CCEEEEEhhhccCccCCCchhcCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCccccccccccccchhhccCC
Confidence 8899999943 122 11 3455555432221111000 00000 011 1
Q ss_pred CC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC----CceeEEEEeeccccccccccccCc
Q psy13453 134 GR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP----SMGLVCFRLKVRFWDKLDNLFGTI 208 (764)
Q Consensus 134 SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P----~l~iV~Fry~P~~~~~~~~~~~~~ 208 (764)
+. -...+.++.+++.+...|+.++.++..++++++.+.|++.++++++.+. ..++++|+..
T Consensus 247 t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~-------------- 312 (376)
T TIGR01977 247 TLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVE-------------- 312 (376)
T ss_pred CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEEC--------------
Confidence 22 2234578899999999999999999999999999999999999998752 3678889762
Q ss_pred cCCccHHHHHHHHHHHhc-CcEEEEece----------eCCeeEEEEeccCCCCCHHHHHHHHHHHHH
Q psy13453 209 SFGDNDLNKAVYDRIIAR-KVIYIVKGS----------FQDRLFMRFAICSSQTEESDVQLGWNEIRT 265 (764)
Q Consensus 209 ~~~~d~~n~~L~~~L~~~-G~~~vs~t~----------l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~ 265 (764)
+.+ -..+.+.|.++ |...-.... ......+|++ ++..++.+|++.+++.|++
T Consensus 313 --~~~--~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis-~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 313 --GID--SEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLS-LGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred --CCC--HHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEe-cCCCCCHHHHHHHHHHHhh
Confidence 111 14677888776 653322110 1123589997 6788999999999999875
No 114
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.13 E-value=1.4e-09 Score=120.76 Aligned_cols=193 Identities=13% Similarity=0.062 Sum_probs=130.8
Q ss_pred HHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhcc
Q psy13453 539 VGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQS 618 (764)
Q Consensus 539 lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~ 618 (764)
+.+.+...+......|..+.....+.+.+.+|+.+.+|.+-+ ....++|+|+++++..++.+...
T Consensus 42 ~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~-------~~~i~~t~g~~~al~~~~~~l~~-------- 106 (382)
T PRK06108 42 IRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATP-------PERIAVTSSGVQALMLAAQALVG-------- 106 (382)
T ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcC-------cceEEEeCChHHHHHHHHHHhcC--------
Confidence 344444444333333555566778889999999998884321 13578899999987766654311
Q ss_pred CCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCC---CCcccHHHHHHHHHHhhhcCCCceEEEEeeccC
Q psy13453 619 KNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD---NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTT 695 (764)
Q Consensus 619 ~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~---~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT 695 (764)
++-.|++..-+|.....++...|++++.+|.+. ++.+|+++|++.+.+. +-+|+.+..++
T Consensus 107 -----------~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~------~~~i~l~~p~N 169 (382)
T PRK06108 107 -----------PGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPR------TRALFINSPNN 169 (382)
T ss_pred -----------CCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCcc------ceEEEEECCCC
Confidence 112466777889888899999999999999963 4579999999988542 33667778889
Q ss_pred Ccccc---ccHHHHHHHHHhcCCEEEEeccccccccc-cchhhh--hhcCCCcccEEEEcCCccCCC-CcCceee
Q psy13453 696 GTCAF---DNLEELGPICQEYNIWLHVDAAYAGSALL-LPEYAH--LKRGLEYVDSFDFNTHKWLLV-NFDCSAM 763 (764)
Q Consensus 696 ~~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~-~~~~r~--~l~gie~aDSit~d~HK~l~~-P~~~g~l 763 (764)
.+|.+ +++++|+++|+++|+|+++|.+|+.+..- -..... .+.....-.-+..+++|.++. .+.+|.+
T Consensus 170 PtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~ 244 (382)
T PRK06108 170 PTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWL 244 (382)
T ss_pred CCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeee
Confidence 99966 46788999999999999999999876432 001000 011111123557799998764 3456765
No 115
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.12 E-value=4.6e-10 Score=127.64 Aligned_cols=191 Identities=15% Similarity=0.094 Sum_probs=122.0
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHH-----hhhhccC------CCCC
Q psy13453 555 LSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKM-----INHWQSK------NPSL 623 (764)
Q Consensus 555 ~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~-----~~~~~~~------~~~~ 623 (764)
.......++|..+++...++||..-. -+=.-+||.||+.+..+..... +.+.+.+ ..+|
T Consensus 88 ~g~~~~d~ie~l~~~ra~~lf~a~~a----------nvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~ 157 (493)
T PRK13580 88 AGCQNVDTVEWEAAEHAKELFGAEHA----------YVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDW 157 (493)
T ss_pred CCCchHHHHHHHHHHHHHHHhCCCcc----------cccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhh
Confidence 34556778999999999999987531 2333578899988877665320 0000000 0000
Q ss_pred ccc--cccCceEE--EecCCcchhHHHHHHhCCC--ceEEEecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 624 TEN--DIRNKLVA--YTSDQSNSSVEKSAIIGDV--PVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 624 ~~~--~~~~~~vi--~~S~~aH~Sv~kAa~~lGl--~v~~Vp~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
... ....+-++ =.+.-.|.+.-....+.|. .++.-++| ++|.+|.+++++.+.+.+ | .|+.+..++.
T Consensus 158 ~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~-----p-lvii~g~S~~ 231 (493)
T PRK13580 158 EALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFK-----P-LILVAGYSAY 231 (493)
T ss_pred hhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHhhcC-----C-EEEEeCcccc
Confidence 000 00001111 1233344444333344453 55666676 579999999999997653 4 5555666666
Q ss_pred ccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 697 TCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 697 ~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+.+-|+++|++||++||++|+||+||+.+.+...-+......+..+|.++.++||+|+.|.| |++
T Consensus 232 -~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~G-G~I 296 (493)
T PRK13580 232 -PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRG-GLV 296 (493)
T ss_pred -CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeCChhhccCCCe-EEE
Confidence 55779999999999999999999999998876443332223345789999999999988986 544
No 116
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.11 E-value=2.3e-09 Score=119.77 Aligned_cols=194 Identities=15% Similarity=0.068 Sum_probs=132.8
Q ss_pred HHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhc
Q psy13453 538 IVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQ 617 (764)
Q Consensus 538 ~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~ 617 (764)
.+.+.+...++.....|........+++.+.+|+.+..|..-+ ....++|+|+++++..++.+...
T Consensus 48 ~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-------~~~i~~~~g~~~a~~~~~~~~~~------- 113 (393)
T PRK05764 48 HIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYD-------PSQVIVTTGAKQALYNAFMALLD------- 113 (393)
T ss_pred HHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCC-------HHHEEEeCCcHHHHHHHHHHhcC-------
Confidence 4445555555443444655566788888888888877664221 13578999999998776654311
Q ss_pred cCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccC
Q psy13453 618 SKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTT 695 (764)
Q Consensus 618 ~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT 695 (764)
++..|++++-+|.....+++..|++++.+|.+. .+.+|+++|++++++. +-+|+++..++
T Consensus 114 ------------~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~N 175 (393)
T PRK05764 114 ------------PGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPK------TKALILNSPSN 175 (393)
T ss_pred ------------CCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCcc------ceEEEEECCCC
Confidence 112477888889999999999999999999973 4689999999988543 23666777888
Q ss_pred Ccccc---ccHHHHHHHHHhcCCEEEEeccccccccccch---hhhhhcCCCcccEEEEcCCccCCCCc-Cceee
Q psy13453 696 GTCAF---DNLEELGPICQEYNIWLHVDAAYAGSALLLPE---YAHLKRGLEYVDSFDFNTHKWLLVNF-DCSAM 763 (764)
Q Consensus 696 ~~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~---~r~~l~gie~aDSit~d~HK~l~~P~-~~g~l 763 (764)
.+|.+ +++++|.++|++||+|+++|.+|+....--.. ......+...-+-+..++.|.++.|- -+|.+
T Consensus 176 PtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i 250 (393)
T PRK05764 176 PTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYA 250 (393)
T ss_pred CCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEE
Confidence 89987 57899999999999999999999864321111 11111222223456678899987552 24543
No 117
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.11 E-value=1e-09 Score=129.68 Aligned_cols=166 Identities=15% Similarity=0.139 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
.-.++-+..|++||.+.+| +.|.|.|.+|..++.++.. ++-.|++...+|-
T Consensus 196 ~i~eAe~~AA~~fgAd~ty----------fvvNGTS~~n~av~~a~~~-------------------~Gd~VLvdRN~HK 246 (714)
T PRK15400 196 PHKEAEEYIARVFNADRSY----------MVTNGTSTANKIVGMYSAP-------------------AGSTVLIDRNCHK 246 (714)
T ss_pred HHHHHHHHHHHHhCCCcEE----------EEeCchHHHHHHHHHHhcC-------------------CCCEEEeecccHH
Confidence 3455667889999998864 4678888888877765421 1236889999999
Q ss_pred hHHHHHHhCCCceEEEecCC--C---Cccc-----HHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh
Q psy13453 643 SVEKSAIIGDVPVRQLRSDD--N---GVLR-----GDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE 712 (764)
Q Consensus 643 Sv~kAa~~lGl~v~~Vp~d~--~---g~md-----~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~ 712 (764)
|+..|+.+.|+..+.++++- . |-|+ ++.++++|++.... +.|+.+++|.+ |..|.+-|+++|+++|+.
T Consensus 247 Sv~haLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~a-k~p~~~vit~p-TYdG~~yd~~~I~~~~~~ 324 (714)
T PRK15400 247 SLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNA-TWPVHAVITNS-TYDGLLYNTDFIKKTLDV 324 (714)
T ss_pred HHHHHHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccc-cCccEEEEECC-CCccEecCHHHHHHHhCC
Confidence 99999999999888887652 1 2345 89999999876533 46888999998 557999999999999998
Q ss_pred cCCEEEEeccccccccccchhhhhhcCC-Ccc---c--EEEEcCCccCCCCcCcee
Q psy13453 713 YNIWLHVDAAYAGSALLLPEYAHLKRGL-EYV---D--SFDFNTHKWLLVNFDCSA 762 (764)
Q Consensus 713 ~glwLHVDaA~Gg~~l~~~~~r~~l~gi-e~a---D--Sit~d~HK~l~~P~~~g~ 762 (764)
++ +|||-|||+.+.|.|.++.. .++ ..| | -++-|.||.|.+-.++|.
T Consensus 325 ~~--ilvDEAwgah~~F~p~~~~~-sam~~ga~~~~~i~vtQStHKtL~alTQaS~ 377 (714)
T PRK15400 325 KS--IHFDSAWVPYTNFSPIYEGK-CGMSGGRVEGKVIYETQSTHKLLAAFSQASM 377 (714)
T ss_pred CC--EEEEccchhhhccCcccCCc-ChhhcCCCCCCceEEEEchhhcccchhHHhH
Confidence 87 79999999999888876421 112 234 4 899999999987666554
No 118
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.08 E-value=1.7e-09 Score=120.90 Aligned_cols=150 Identities=15% Similarity=0.105 Sum_probs=109.5
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
.++.+.+++++|.+ ..+++++|+.++..++. ... ++..|+++...|.+.
T Consensus 50 ~~le~~la~l~g~~-----------~~l~~~sG~~al~~~l~-----ll~---------------~Gd~Vl~~~~~y~~~ 98 (378)
T TIGR01329 50 TALESLLAKLDKAD-----------RAFAFSSGMAALDVITR-----LLN---------------NGDEIIAGDDLYGGT 98 (378)
T ss_pred HHHHHHHHHHhCCC-----------cEEEECCHHHHHHHHHH-----HhC---------------CCCEEEEcCCCchHH
Confidence 44556788888874 25777778766543221 111 112477788888776
Q ss_pred HH----HHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEe
Q psy13453 645 EK----SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVD 720 (764)
Q Consensus 645 ~k----Aa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVD 720 (764)
.+ .+...|++++.++++ |+++++++|++. +-+|+.+..++.+|.+-|+++|+++|++||++++||
T Consensus 99 ~~~~~~~~~~~G~~v~~vd~~-----d~~~le~~i~~~------tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD 167 (378)
T TIGR01329 99 DRLLTQVVPRSGVVVVHVDTT-----DLDKVKAALGPK------TKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVD 167 (378)
T ss_pred HHHHHHHHHHcCcEEEEeCCC-----CHHHHHHhcCcC------ceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEE
Confidence 54 345579999988864 789999988643 448888889999999999999999999999999999
Q ss_pred ccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC--ceee
Q psy13453 721 AAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD--CSAM 763 (764)
Q Consensus 721 aA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~--~g~l 763 (764)
+||+......+ .. . .+|.+..++|||++.|.+ .|++
T Consensus 168 ~a~~~~~~~~~-l~-----~-g~Di~v~S~tK~l~G~~~~~~G~v 205 (378)
T TIGR01329 168 NTMMSPLLCNP-LE-----L-GADIVYHSATKFLAGHSDVMAGVL 205 (378)
T ss_pred CCCcccccCCh-hh-----c-CCcEEEEecceeccCCccceeEEE
Confidence 99976543222 11 1 469999999999998876 6765
No 119
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.07 E-value=4.1e-09 Score=128.91 Aligned_cols=232 Identities=10% Similarity=-0.034 Sum_probs=153.9
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
.|.|+.+.+.+.|++. +.||+|++|++|+++|+++|++.+. ++-+++.|.++|..|.+|||.+|++ ++.+
T Consensus 625 aH~sn~a~a~~~G~~v---v~v~~d~~G~vDle~L~~~i~~~~~--~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv 699 (993)
T PLN02414 625 AHGTNPASAAMCGMKI---VVVGTDAKGNINIEELRKAAEAHKD--NLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQV 699 (993)
T ss_pred cCccCHHHHHHCCCEE---EEeccCCCCCcCHHHHHHHHhccCC--CeEEEEEECCCccccccchHHHHHHHHHHcCCEE
Confidence 7999999999999988 9999999999999999999985321 1223479999999999999999987 7888
Q ss_pred eecccc---------------------ccc-c----------ceeeeecCCCcccccccccc----c-cC---CcccCCC
Q psy13453 95 KVGGVL---------------------RRV-Y----------SSCLVPRGQKSLRTTVLFHF----L-FQ---HWQIPLG 134 (764)
Q Consensus 95 HVDa~l---------------------~~~-y----------~s~ll~rd~~~l~~~~s~~~----d-~~---d~tle~S 134 (764)
+|||+. .|+ + .+++..+. +... .+-... + +. ..+-.|+
T Consensus 700 ~vDgAq~~a~~~l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~-~L~p-~lPg~~v~~~~~~~~r~~~s~iGt 777 (993)
T PLN02414 700 YMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAP-FLPSHPVVPTGGIPRPEKTQPLGT 777 (993)
T ss_pred EEEecCHHhccCcCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEch-hhcc-cCCCCccccCCCcccccCCCCcCC
Confidence 999942 111 1 12332222 1111 110000 0 00 1122366
Q ss_pred Ccc-------cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC--ceeEEEEeeccccccccccc
Q psy13453 135 RRF-------RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS--MGLVCFRLKVRFWDKLDNLF 205 (764)
Q Consensus 135 Rr~-------~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~--l~iV~Fry~P~~~~~~~~~~ 205 (764)
+.+ .++..|+-|+.+|.+|+++..++++.+|+|++++|++..+....+++. +.=..+...+ .+.
T Consensus 778 ~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~--l~~----- 850 (993)
T PLN02414 778 ISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRP--FKN----- 850 (993)
T ss_pred ccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccc--ccc-----
Confidence 542 223669999999999999999999999999999998754444333322 1111121110 000
Q ss_pred cCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 206 GTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 206 ~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
....+ ...+.++|.+.|....+.. |.....||++.+--+ +++++|+|++.++.+.+++.+
T Consensus 851 ---~~g~~--~~di~krL~d~Gihapt~~-~pv~~~lmiepTE~~-skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 851 ---TAGIE--PEDVAKRLMDYGFHAPTMS-WPVPGTLMIEPTESE-SKAELDRFCDALISIREEIAD 910 (993)
T ss_pred ---ccCCC--HHHHHHHHHHcCcEEeeec-cccCCEEEEEeeeeC-CHHHHHHHHHHHHHHHHHHHH
Confidence 00111 1568888888887544432 444668999877666 588999999999999988865
No 120
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.07 E-value=2.2e-09 Score=122.08 Aligned_cols=150 Identities=17% Similarity=0.149 Sum_probs=107.7
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEe
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT 636 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~ 636 (764)
.|....+| +.+++++|.+. .+++++|+.|+..++.+. .. +...|++
T Consensus 68 ~pt~~~le----~~la~l~g~~~-----------~v~fsSG~~Ai~~al~~l----l~---------------~Gd~VI~ 113 (437)
T PRK05613 68 NPTVEALE----NRIASLEGGVH-----------AVAFASGQAAETAAILNL----AG---------------AGDHIVT 113 (437)
T ss_pred ChHHHHHH----HHHHHHhCCCe-----------EEEeCCHHHHHHHHHHHh----cC---------------CCCEEEE
Confidence 45554444 47788887642 567777778877665432 11 1225788
Q ss_pred cCCcchhHH----HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh
Q psy13453 637 SDQSNSSVE----KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE 712 (764)
Q Consensus 637 S~~aH~Sv~----kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~ 712 (764)
+...|.+.. +.+...|+.++.++ +.. |+++|+++|++.++ +|+...-++.+|.+-||++|+++|++
T Consensus 114 ~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~~~---d~e~l~~~l~~~tk------~V~~e~~~Np~~~v~di~~I~~la~~ 183 (437)
T PRK05613 114 SPRLYGGTETLFLVTLNRLGIEVTFVE-NPD---DPESWQAAVQPNTK------AFFGETFANPQADVLDIPAVAEVAHR 183 (437)
T ss_pred CCCccHHHHHHHHHHHHhcCeEEEEEC-CCC---CHHHHHHhCCccCe------EEEEECCCCCCCcccCHHHHHHHHHH
Confidence 888998874 34456788988887 332 89999999876432 56666667778899999999999999
Q ss_pred cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 713 YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 713 ~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+|+.+|||++++.+....+. --| ||.++.++|||++.+
T Consensus 184 ~gi~livD~t~a~g~~~~p~----~~G---aDivv~S~~K~l~G~ 221 (437)
T PRK05613 184 NQVPLIVDNTIATAALVRPL----ELG---ADVVVASLTKFYTGN 221 (437)
T ss_pred cCCeEEEECCCccccccChH----HhC---CCEEEeeccceecCC
Confidence 99999999999876553332 123 599999999998754
No 121
>PRK09082 methionine aminotransferase; Validated
Probab=99.07 E-value=4.1e-09 Score=117.80 Aligned_cols=175 Identities=11% Similarity=0.019 Sum_probs=126.2
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 552 FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 552 ~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
..|........+.+.+.+++.+++|.+.+ .....++|+|+|+++..++.+.. . +.
T Consensus 61 ~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~------~~~~i~~t~G~~~al~~~~~~~~----~---------------~g 115 (386)
T PRK09082 61 NQYPPMTGVAALREAIAAKTARLYGRQYD------ADSEITVTAGATEALFAAILALV----R---------------PG 115 (386)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCC------CCCcEEEeCCHHHHHHHHHHHHc----C---------------CC
Confidence 34544556678899999999999887532 11257899999999877765321 1 12
Q ss_pred eEEEecCCcchhHHHHHHhCCCceEEEecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHHH
Q psy13453 632 LVAYTSDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEELG 707 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eIa 707 (764)
..|++..-+|.+...+++..|.+++.+|++ +++.+|+++|++++++. +-+|+.+..++.+|.+ +++++|.
T Consensus 116 d~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~~~~i~ 189 (386)
T PRK09082 116 DEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISPR------TRLIILNTPHNPSGTVWSAADMRALW 189 (386)
T ss_pred CEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCcc------ceEEEEeCCCCCCCcCCCHHHHHHHH
Confidence 257788889999999999999999999997 46789999999988542 3366667778899976 8999999
Q ss_pred HHHHhcCCEEEEeccccccccccchhhh--hhcCCCcccEEEEcCCccCCCC
Q psy13453 708 PICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 708 ~i~~~~glwLHVDaA~Gg~~l~~~~~r~--~l~gie~aDSit~d~HK~l~~P 757 (764)
++|++||+|+++|.+|+....-...... .+.++..-.-+..++.|.++.|
T Consensus 190 ~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~ 241 (386)
T PRK09082 190 QLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVT 241 (386)
T ss_pred HHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccch
Confidence 9999999999999999764331111111 1222222235566889988655
No 122
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.06 E-value=6.7e-09 Score=115.11 Aligned_cols=159 Identities=16% Similarity=0.075 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
..+..++.+++++++|.+ ..+++++|+++++.++.+. .. ++..|++++.+
T Consensus 83 ~~~~~~l~~~la~~~~~~-----------~~i~~~~g~~~~~~~l~~~----~~---------------~gd~V~~~~~~ 132 (385)
T PRK05958 83 SPAHEALEEELAEWFGAE-----------RALLFSSGYAANLAVLTAL----AG---------------KGDLIVSDKLN 132 (385)
T ss_pred cHHHHHHHHHHHHHhCCC-----------cEEEECcHHHHHHHHHHHh----CC---------------CCCEEEEeCcc
Confidence 345566777888888743 3577888899887655422 11 12257788899
Q ss_pred chhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEe
Q psy13453 641 NSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVD 720 (764)
Q Consensus 641 H~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVD 720 (764)
|.+...++...|..++.+|. .|++++++.+++.. ..+.+|+.....+.+|..+++++|+++|++||+|+++|
T Consensus 133 ~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~i~~~~---~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~D 204 (385)
T PRK05958 133 HASLIDGARLSRARVRRYPH-----NDVDALEALLAKWR---AGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVD 204 (385)
T ss_pred CHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhcc---CCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEE
Confidence 99999999999999888875 37899999886531 12445555556677899999999999999999999999
Q ss_pred cccccccccc-chhhhhhcCCC-ccc-EEEEcCCccCCCC
Q psy13453 721 AAYAGSALLL-PEYAHLKRGLE-YVD-SFDFNTHKWLLVN 757 (764)
Q Consensus 721 aA~Gg~~l~~-~~~r~~l~gie-~aD-Sit~d~HK~l~~P 757 (764)
.+|+.+.+.. ...-....++. ..| -+..++||+++.+
T Consensus 205 e~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 244 (385)
T PRK05958 205 EAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSS 244 (385)
T ss_pred CcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccC
Confidence 9997543321 11001111221 223 5578999999753
No 123
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.06 E-value=1.2e-08 Score=114.68 Aligned_cols=197 Identities=15% Similarity=0.131 Sum_probs=127.6
Q ss_pred CccccccCCCCChHHHHHH-HHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHH
Q psy13453 523 PQFNAYFPTGSSYPSIVGD-MLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEAT 601 (764)
Q Consensus 523 P~~~~~~~~~~~~~~~lad-~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeAN 601 (764)
--|.+..+-+.+ .++-.. |....... ..|..+|...++|+. +++++|.+. .++|++||.|.
T Consensus 38 ~v~iDLltDsgT-~aMs~~q~a~~~~GD--e~yag~~s~~~lE~~----va~~~G~~~-----------av~v~sGT~Al 99 (450)
T TIGR02618 38 DVYIDLLTDSGT-NAMSDKQWAGLMMGD--EAYAGSRNFYHLERT----VRELYGFKY-----------VVPTHQGRGAE 99 (450)
T ss_pred ceEEEcccCCCc-HHHHHHHHHHhhhcc--hhhcCCCcHHHHHHH----HHHHHCCCe-----------EEEcCCHHHHH
Confidence 356777765554 333222 33333332 458899999999985 466777753 79999999994
Q ss_pred HHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHH-HHhCCCceEEEecC----------CCCcccHHH
Q psy13453 602 LVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKS-AIIGDVPVRQLRSD----------DNGVLRGDA 670 (764)
Q Consensus 602 l~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kA-a~~lGl~v~~Vp~d----------~~g~md~~~ 670 (764)
..+.. + ..+ +.-.| +...|++-.++ ....|...+.+++| .+|.||+++
T Consensus 100 ~ll~~-l---~l~---------------pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~ 158 (450)
T TIGR02618 100 NLLSQ-I---AIK---------------PGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKK 158 (450)
T ss_pred HHHHH-h---CCC---------------CcCEE--CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHH
Confidence 43211 1 010 11123 56888777777 56777755556443 368999999
Q ss_pred HHHHHHHhhhcCCCceEEEEeeccCCc-ccc---ccHHHHHHHHHhcCCEEEEeccccc-cccccch----hh-----hh
Q psy13453 671 LLTAVKEDLAKGLIPCCLIATLGTTGT-CAF---DNLEELGPICQEYNIWLHVDAAYAG-SALLLPE----YA-----HL 736 (764)
Q Consensus 671 Le~~I~~~~~~G~~p~~VvataGTT~~-Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg-~~l~~~~----~r-----~~ 736 (764)
|+++|++... .+.+ +|+++..++.. |.. +++++|.++|++||+++|.|||... .+++..+ +. ..
T Consensus 159 Le~aI~~~~~-~~~~-lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei 236 (450)
T TIGR02618 159 LQKLIDEVGA-DKIP-YICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEI 236 (450)
T ss_pred HHHHhccccC-cccC-ceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHH
Confidence 9999985321 2334 44444444544 666 7899999999999999999999877 3444311 11 00
Q ss_pred -hcCCCcccEEEEcCCccCCCCcCc
Q psy13453 737 -KRGLEYVDSFDFNTHKWLLVNFDC 760 (764)
Q Consensus 737 -l~gie~aDSit~d~HK~l~~P~~~ 760 (764)
-+=.+.||+++.++||-.++|.|.
T Consensus 237 ~~e~~~~aD~~~~S~~Kd~~~~~GG 261 (450)
T TIGR02618 237 LKEMMSYADGCTMSGKKDCLVNIGG 261 (450)
T ss_pred HHHHhccCcEEEEeeccCCCCCCce
Confidence 111356899999999999999874
No 124
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.05 E-value=2.7e-09 Score=126.20 Aligned_cols=170 Identities=14% Similarity=0.072 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
.-.++-+..|++||.+.+| ++|.|.|.+|..++.++.. +.-.|++...+|-
T Consensus 175 ~i~eAq~~AA~~fgAd~ty----------FlvNGTS~gn~a~i~a~~~-------------------~Gd~VLvdRN~HK 225 (720)
T PRK13578 175 AAKDAQKHAAKVFNADKTY----------FVLNGTSASNKVVTNALLT-------------------PGDLVLFDRNNHK 225 (720)
T ss_pred HHHHHHHHHHHHhCCCceE----------EEeCChhHHHHHHHHHhcC-------------------CCCEEEeecccHH
Confidence 4455667889999998864 4778888888887775421 1236889999999
Q ss_pred hHHHH-HHhCCCceEEEecCC-----CCcccHHH-----HHHHHHHh---hhcCCCc-eEEEEeeccCCccccccHHHHH
Q psy13453 643 SVEKS-AIIGDVPVRQLRSDD-----NGVLRGDA-----LLTAVKED---LAKGLIP-CCLIATLGTTGTCAFDNLEELG 707 (764)
Q Consensus 643 Sv~kA-a~~lGl~v~~Vp~d~-----~g~md~~~-----Le~~I~~~---~~~G~~p-~~VvataGTT~~GaiDpl~eIa 707 (764)
|+..+ ..+.|+..+.+++.- -|-|+++. ++++|++. .++..+| -+|++|.+|. .|.+-|+++|+
T Consensus 226 Sv~hgaLiLsGa~PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~I~ 304 (720)
T PRK13578 226 SNHHGALIQAGATPVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQVV 304 (720)
T ss_pred HHHHHHHHHcCCeEEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHHHH
Confidence 99996 778899888887642 23456544 99999875 2223355 5677777654 69999999999
Q ss_pred HH-HHhcCCEEEEeccccccccccchhhhhh--cCCCccc----EEEEcCCccCCCCcCceee
Q psy13453 708 PI-CQEYNIWLHVDAAYAGSALLLPEYAHLK--RGLEYVD----SFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 708 ~i-~~~~glwLHVDaA~Gg~~l~~~~~r~~l--~gie~aD----Sit~d~HK~l~~P~~~g~l 763 (764)
++ |+.++ .||||-|||+.+.|.|.++.+- ..=..|| -++-|.||.|.+=.++|.+
T Consensus 305 ~~~~h~~~-~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~L 366 (720)
T PRK13578 305 DKIGHLCD-YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQI 366 (720)
T ss_pred HHhhccCC-cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhh
Confidence 98 78888 9999999999998888654321 1113579 9999999999876666554
No 125
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.05 E-value=6.5e-09 Score=116.49 Aligned_cols=218 Identities=11% Similarity=0.034 Sum_probs=150.2
Q ss_pred HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceecc
Q psy13453 24 SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGG 98 (764)
Q Consensus 24 v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa 98 (764)
+.+.++..|... +.||+++++.+|+++|+++|.++ +-+++-+..+.++|.+-|++++++ +++++||+
T Consensus 123 ~~~~~~~~g~~v---~~v~~~~~~~~~~~~l~~~i~~~-----t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~ 194 (398)
T TIGR03392 123 WLMVAQQTGAKV---VKLPIGADLLPDIRQLPELLTPR-----TRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDG 194 (398)
T ss_pred HHHHHHHcCcEE---EEEecCCCCCcCHHHHHHHhccC-----ceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEh
Confidence 566788899877 99999988999999999999753 224445778899999999999876 88999999
Q ss_pred ccc--------------------cc-c---c-eeeeecCCCccccc--cccc------cccCCc-------ccC-CCCcc
Q psy13453 99 VLR--------------------RV-Y---S-SCLVPRGQKSLRTT--VLFH------FLFQHW-------QIP-LGRRF 137 (764)
Q Consensus 99 ~l~--------------------~~-y---~-s~ll~rd~~~l~~~--~s~~------~d~~d~-------tle-~SRr~ 137 (764)
... ++ + + ++++.+. +.+... +... .++.++ .++ |+...
T Consensus 195 a~~~~~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~ 273 (398)
T TIGR03392 195 AQGVVHGPPDVQALDIDFYAFSGHKLYGPTGIGVLYGKT-ELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNI 273 (398)
T ss_pred hhhcCCCCCChhhcCCCEEEEecccccCCCceEEEEEcH-HHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCH
Confidence 431 11 1 1 2333322 111100 0000 000011 111 22222
Q ss_pred -cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHH
Q psy13453 138 -RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLN 216 (764)
Q Consensus 138 -~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n 216 (764)
..+.+.++++++-..|+.++.++..++++++.+.+++.+++++...|...+++|+.. +.+ .
T Consensus 274 ~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~----------------~~~--~ 335 (398)
T TIGR03392 274 AGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPGSSLLAFDFA----------------GVH--H 335 (398)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeC----------------CcC--H
Confidence 456888999988888898888999999999999999999999998888889999752 111 2
Q ss_pred HHHHHHHHhcCcEEEEecee--------CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 217 KAVYDRIIARKVIYIVKGSF--------QDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 217 ~~L~~~L~~~G~~~vs~t~l--------~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
..+.++|.++|....+.... ....++|+++. ..+|+++++.+++.|+++.+.
T Consensus 336 ~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~-~~~t~~ei~~l~~~l~~~~~~ 395 (398)
T TIGR03392 336 SDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFA-PYNTQQDVDALVDAVGAALEL 395 (398)
T ss_pred HHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEee-ccCCHHHHHHHHHHHHHHHHH
Confidence 46778888888755443311 11348999755 468899999999999987654
No 126
>PLN02271 serine hydroxymethyltransferase
Probab=99.05 E-value=2.3e-09 Score=122.64 Aligned_cols=172 Identities=16% Similarity=0.056 Sum_probs=120.3
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
......++|..+++...++||.+... .+.-+-.-+||.||+.++.+-. . |...|+
T Consensus 188 G~~~iD~iE~la~era~~lF~~~~~~------~gaNVQp~SGs~AN~aV~~ALl----~---------------PGD~IL 242 (586)
T PLN02271 188 GNQYIDQIERLCCERALAAFGLDSEK------WGVNVQPYSCTSANFAVYTGLL----L---------------PGDRIM 242 (586)
T ss_pred CChhHHHHHHHHHHHHHHHhCCcccc------cccceeeccHHHHHHHHHHHhc----C---------------CCCEEE
Confidence 34556789999999999999986421 1112444588999988875431 1 112344
Q ss_pred ec---CCcchhHH------HHHHhCCCceEEEe--cC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccH
Q psy13453 636 TS---DQSNSSVE------KSAIIGDVPVRQLR--SD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNL 703 (764)
Q Consensus 636 ~S---~~aH~Sv~------kAa~~lGl~v~~Vp--~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl 703 (764)
.. .-.|.+.. +-+...|+.+..+| +| ++|.+|.++|++...+. +|-+|++..-+. -..-|+
T Consensus 243 ~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~-----rPKLII~g~Say--pr~~D~ 315 (586)
T PLN02271 243 GLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDF-----RPKILICGGSSY--PREWDY 315 (586)
T ss_pred EecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhc-----CCeEEEECchhc--cCcCCH
Confidence 32 34565543 33455677677776 65 67999999999865332 366776633333 266789
Q ss_pred HHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 704 EELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 704 ~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
++|++||+++|++|+||+||..+++....+..- +..||.++.+.||||..|.| |++
T Consensus 316 ~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP---~~~aDvvt~TTHKtLrGPrG-G~I 371 (586)
T PLN02271 316 ARFRQIADKCGAVLMCDMAHISGLVAAKECVNP---FDYCDIVTSTTHKSLRGPRG-GII 371 (586)
T ss_pred HHHHHHHHHcCCEEEEECcccccccccCcCCCC---CcCCcEEEeCCcccCCCCCc-eEE
Confidence 999999999999999999999998876543322 34689999999999999999 544
No 127
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.05 E-value=3.3e-09 Score=118.19 Aligned_cols=163 Identities=15% Similarity=0.064 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS 643 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S 643 (764)
..++.+++++++|.++ ...++|+|+|+++..++.+.. . +...|++++-++..
T Consensus 68 ~~~lr~~ia~~l~~~~---------~~v~~~~g~t~al~~~~~~~~----~---------------~gd~vl~~~p~y~~ 119 (380)
T PRK06225 68 FPELRELILKDLGLDD---------DEALITAGATESLYLVMRAFL----S---------------PGDNAVTPDPGYLI 119 (380)
T ss_pred hHHHHHHHHHhcCCCC---------CcEEEeCCHHHHHHHHHHHhc----C---------------CCCEEEEcCCCCcc
Confidence 3456778888888765 368999999999887776431 1 01135666667777
Q ss_pred HHHHHHhCCCceEEEecCC---CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHHHHHHHhcCCEE
Q psy13453 644 VEKSAIIGDVPVRQLRSDD---NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEELGPICQEYNIWL 717 (764)
Q Consensus 644 v~kAa~~lGl~v~~Vp~d~---~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eIa~i~~~~glwL 717 (764)
...++...|.+++.+|++. ++.+|+++|++.+.+. +-+|+.+..++.+|.+ +++.+|+++|++||+++
T Consensus 120 ~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~i 193 (380)
T PRK06225 120 IDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDEN------TRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFL 193 (380)
T ss_pred hHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCC------ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEE
Confidence 7788888999999999742 4689999999988643 3366666778889986 57999999999999999
Q ss_pred EEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 718 HVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 718 HVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
++|.+|+.+..-.+... .+. ....-+..+++|+++.| .-+|.+
T Consensus 194 i~De~y~~~~~~~~~~~-~~~--~~~~i~~~s~SK~~g~~G~RiG~i 237 (380)
T PRK06225 194 LHDCTYRDFAREHTLAA-EYA--PEHTVTSYSFSKIFGMAGLRIGAV 237 (380)
T ss_pred EEehhHHHHhccCCchh-hcC--CCCEEEEeechhhcCCccceeEEE
Confidence 99999875321111000 011 11234455889999744 235655
No 128
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.04 E-value=2.7e-09 Score=118.85 Aligned_cols=151 Identities=19% Similarity=0.146 Sum_probs=112.0
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|...++|+ .+++++|.+ ..+++++|++||..++.+... +...|+
T Consensus 38 ~~p~~~~le~----~la~l~g~~-----------~a~~~~sG~~Ai~~~l~~l~~-------------------~gd~Vl 83 (369)
T cd00614 38 GNPTVDALEK----KLAALEGGE-----------AALAFSSGMAAISTVLLALLK-------------------AGDHVV 83 (369)
T ss_pred CChhHHHHHH----HHHHHHCCC-----------CEEEEcCHHHHHHHHHHHHcC-------------------CCCEEE
Confidence 5677777776 556666653 358889999999888775421 112477
Q ss_pred ecCCcchhHHH----HHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSSVEK----SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~Sv~k----Aa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...|.+... .+...|++++.++.+ |++++++++++. +-+|+....++.+|.+.|+++|+++|+
T Consensus 84 ~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~------~~~v~~e~~~np~g~~~dl~~i~~la~ 152 (369)
T cd00614 84 ASDDLYGGTYRLFERLLPKLGIEVTFVDPD-----DPEALEAAIKPE------TKLVYVESPTNPTLKVVDIEAIAELAH 152 (369)
T ss_pred ECCCCcchHHHHHHHHHhhcCeEEEEeCCC-----CHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHHHHH
Confidence 77778876543 345678888888765 488888888542 447778888889999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~ 758 (764)
+||++++||.+|+.+....+ .-. .+|.++.+++|+++.+-
T Consensus 153 ~~g~~livD~t~~~~~~~~~----~~~---g~Divv~S~tK~l~g~~ 192 (369)
T cd00614 153 EHGALLVVDNTFATPYLQRP----LEL---GADIVVHSATKYIGGHS 192 (369)
T ss_pred HcCCEEEEECCCcchhcCCh----hhh---CCcEEEeccceeccCCC
Confidence 99999999999987654221 111 46999999999998654
No 129
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.04 E-value=3.7e-09 Score=118.71 Aligned_cols=150 Identities=17% Similarity=0.120 Sum_probs=110.4
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEe
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT 636 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~ 636 (764)
.|...++| +.+++++|.+. .++|+||++|+..++.+.. . +.-.|++
T Consensus 60 ~p~~~~le----~~la~l~g~~~-----------~v~~ssG~~Ai~~al~al~----~---------------~Gd~Vi~ 105 (390)
T PRK08133 60 NPTVTMFQ----ERLAALEGAEA-----------CVATASGMAAILAVVMALL----Q---------------AGDHVVS 105 (390)
T ss_pred ChHHHHHH----HHHHHHhCCCc-----------EEEECCHHHHHHHHHHHHh----C---------------CCCEEEE
Confidence 44444444 46777887643 5899999999988776431 1 1124677
Q ss_pred cCCcchhHH----HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh
Q psy13453 637 SDQSNSSVE----KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE 712 (764)
Q Consensus 637 S~~aH~Sv~----kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~ 712 (764)
+...|.+.. +.+...|++++.++++ |+++++++|++. +-+|++...++.+|.+.|+++|+++|++
T Consensus 106 ~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~~i~~~------tklV~ie~p~NptG~v~dl~~I~~la~~ 174 (390)
T PRK08133 106 SRSLFGSTVSLFEKIFARFGIETTFVDLT-----DLDAWRAAVRPN------TKLFFLETPSNPLTELADIAALAEIAHA 174 (390)
T ss_pred ccCcchhHHHHHHHHHHHcCcEEEEECCC-----CHHHHHHhcCcC------CeEEEEECCCCCCCCcCCHHHHHHHHHH
Confidence 887775543 3456689999888875 688999888653 3477788889999999999999999999
Q ss_pred cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc
Q psy13453 713 YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 713 ~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~ 758 (764)
||++++||.+|+......| .-. .+|-++.++||+++.+-
T Consensus 175 ~gi~livD~t~~~~~~~~p----l~~---g~Divv~S~sK~~~g~g 213 (390)
T PRK08133 175 AGALLVVDNCFCTPALQQP----LKL---GADVVIHSATKYLDGQG 213 (390)
T ss_pred cCCEEEEECCCcccccCCc----hhh---CCcEEEeecceeecCCc
Confidence 9999999999976544332 111 35999999999998654
No 130
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.03 E-value=4.3e-09 Score=117.38 Aligned_cols=153 Identities=10% Similarity=0.079 Sum_probs=109.9
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
++..+++++.+|.+ ..++|+|||.|+.+++.+.- . .++-.|+++..+|.+.
T Consensus 34 ~~~e~~la~~~g~~-----------~~v~~~sgt~al~~~l~~~~---~---------------~~Gd~Viv~~~t~~~~ 84 (375)
T PRK11706 34 RRCQQWLEQRFGSA-----------KVLLTPSCTAALEMAALLLD---I---------------QPGDEVIMPSYTFVST 84 (375)
T ss_pred HHHHHHHHHHhCCC-----------eEEEECCHHHHHHHHHHHhC---C---------------CCCCEEEECCCCcHHH
Confidence 33445677777763 36899999999766654320 0 1123588899999999
Q ss_pred HHHHHhCCCceEEEecCCC-CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccc
Q psy13453 645 EKSAIIGDVPVRQLRSDDN-GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAY 723 (764)
Q Consensus 645 ~kAa~~lGl~v~~Vp~d~~-g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~ 723 (764)
..++...|+.++.+++|++ +.+|+++|+++|++. +-+|+.+ ..+|...|+++|.++|++||+++++|+||
T Consensus 85 ~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~~------tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~ 155 (375)
T PRK11706 85 ANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITPK------TRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQ 155 (375)
T ss_pred HHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCCC------CeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECcc
Confidence 9999999999999999866 589999999998653 2245444 35798899999999999999999999999
Q ss_pred cccccccchhhhhhcCCCcccEEEEcCC--ccCCCCcCc
Q psy13453 724 AGSALLLPEYAHLKRGLEYVDSFDFNTH--KWLLVNFDC 760 (764)
Q Consensus 724 Gg~~l~~~~~r~~l~gie~aDSit~d~H--K~l~~P~~~ 760 (764)
+.+.....+ . + |- ..|--++|+| |.+.+.-+.
T Consensus 156 a~g~~~~~~--~-~-g~-~~~~~~~Sf~~~K~l~~g~gG 189 (375)
T PRK11706 156 GVMSTYKGR--A-L-GT-IGHIGCFSFHETKNYTAGEGG 189 (375)
T ss_pred ccccccCCe--e-e-ec-CcCEEEEeCCCCccccccCCe
Confidence 876532211 1 1 11 2355567777 988664443
No 131
>PRK07777 aminotransferase; Validated
Probab=99.03 E-value=9.3e-09 Score=114.91 Aligned_cols=181 Identities=14% Similarity=0.067 Sum_probs=125.8
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 552 FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 552 ~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
..|...+...++.+.+.+|+.+.+|++.+ .....++|+|+|+++..++.+. .. ++
T Consensus 55 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~------~~~~i~~t~G~~~al~~~~~~~----~~---------------~g 109 (387)
T PRK07777 55 NQYPPGPGIPELRAAIAAQRRRRYGLEYD------PDTEVLVTVGATEAIAAAVLGL----VE---------------PG 109 (387)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCC------CCCcEEEeCCcHHHHHHHHHHh----cC---------------CC
Confidence 34555556678888888999888887532 0124789999999987665422 11 11
Q ss_pred eEEEecCCcchhHHHHHHhCCCceEEEecCCC---CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHH
Q psy13453 632 LVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDN---GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEE 705 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~---g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~e 705 (764)
..|++..-.|.....++...|..++.+|.+++ +.+|+++|++.+.+. +-+|+.+..++.+|.+ +++++
T Consensus 110 d~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~~~~ 183 (387)
T PRK07777 110 DEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPR------TRALIVNSPHNPTGTVLTAAELAA 183 (387)
T ss_pred CEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcc------cEEEEEcCCCCCCCccCCHHHHHH
Confidence 24666677788888888999999999998754 569999999988543 3366667778889987 56999
Q ss_pred HHHHHHhcCCEEEEeccccccccccchhhh--hhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 706 LGPICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 706 Ia~i~~~~glwLHVDaA~Gg~~l~~~~~r~--~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
|.++|++|++++++|.+|+....-...+.. .+.+....+-+..+++|.++.| .-+|.+
T Consensus 184 l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~ 244 (387)
T PRK07777 184 IAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWA 244 (387)
T ss_pred HHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEE
Confidence 999999999999999999764321111111 1223333467788999999866 224543
No 132
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.01 E-value=4.6e-09 Score=117.33 Aligned_cols=130 Identities=10% Similarity=0.145 Sum_probs=99.5
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEe
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT 636 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~ 636 (764)
.|...++| +++++.+|.+ ..++|+|||+++.+++.+.. ..++..|++
T Consensus 30 g~~~~~~e----~~la~~~g~~-----------~~v~~~sgt~aL~~~l~al~------------------~~pGd~Viv 76 (376)
T TIGR02379 30 GPFSRRCE----TWLENRTGTK-----------KALLTPSCTAALEMAALLLD------------------IQPGDEVIM 76 (376)
T ss_pred cHHHHHHH----HHHHHHhCCC-----------eEEEeCCHHHHHHHHHHHcC------------------CCCcCEEEE
Confidence 45555555 4666666653 36899999999766655320 012235788
Q ss_pred cCCcchhHHHHHHhCCCceEEEecCCC-CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCC
Q psy13453 637 SDQSNSSVEKSAIIGDVPVRQLRSDDN-GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNI 715 (764)
Q Consensus 637 S~~aH~Sv~kAa~~lGl~v~~Vp~d~~-g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~gl 715 (764)
+..+|.+...++...|..++.|++|.+ +.+|+++|+++|++. +-+|+. +..+|..-|+++|.++|++||+
T Consensus 77 ~~~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~~------tk~Iip---~~~~G~~~d~~~I~~la~~~~i 147 (376)
T TIGR02379 77 PSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITHR------TKAIVP---VHYAGVACDMDTIMALANKHQL 147 (376)
T ss_pred CCCCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcC------ceEEEE---eCCCCCccCHHHHHHHHHHCCC
Confidence 999999999999999999999999865 689999999998653 225544 3457999999999999999999
Q ss_pred EEEEecccccccc
Q psy13453 716 WLHVDAAYAGSAL 728 (764)
Q Consensus 716 wLHVDaA~Gg~~l 728 (764)
++++|+||+.+..
T Consensus 148 ~vIeDaa~~~g~~ 160 (376)
T TIGR02379 148 FVIEDAAQGVMST 160 (376)
T ss_pred EEEEECccccCCc
Confidence 9999999987543
No 133
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.01 E-value=4.5e-09 Score=117.42 Aligned_cols=222 Identities=9% Similarity=-0.053 Sum_probs=143.4
Q ss_pred ccccCCcceeeeeHHHHHhhcC----CCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCc-
Q psy13453 11 AYPSETLSLLIYESFKATHSLS----GTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSL- 85 (764)
Q Consensus 11 ~~~~~~~~~~~YSv~KAa~~LG----l~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi- 85 (764)
+..++. .|-|...++..+| ... +.||+++++++|+++|+++|.++ +.+++.+.++ ++|.++|+
T Consensus 111 Vl~~~~---~h~~~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~i~~~-----t~~viv~~~~-~~G~~~~~l 178 (398)
T cd00613 111 VLVPDS---AHPTNPAVARTRGEPLGIEV---VEVPSDEGGTVDLEALKEEVSEE-----VAALMVQYPN-TLGVFEDLI 178 (398)
T ss_pred EEEcCc---cCcchHHHHHHhcccCCcEE---EEeccCCCCCcCHHHHHHhcCCC-----eEEEEEECCC-CCceecchH
Confidence 344455 6788888888887 654 88999888899999999998643 3344555566 57999885
Q ss_pred hhhhc-----CCCceeccccc--------------------ccc----------ceeeeecCCCccccccccc-------
Q psy13453 86 NAPVS-----NGPLKVGGVLR--------------------RVY----------SSCLVPRGQKSLRTTVLFH------- 123 (764)
Q Consensus 86 ~~ia~-----~~wlHVDa~l~--------------------~~y----------~s~ll~rd~~~l~~~~s~~------- 123 (764)
++|++ ++|+++|+... +++ ++++..++ +.... +...
T Consensus 179 ~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~-~~~~~-~~~~~~~~~~~ 256 (398)
T cd00613 179 KEIADIAHSAGALVYVDGDNLNLTGLKPPGEYGADIVVGNLQKTGVPHGGGGPGAGFFAVKK-ELVRF-LPGRLVGVTKD 256 (398)
T ss_pred HHHHHHHHhcCCEEEEEeccccccCCCChHHcCCCEEEeeccccCCCCCCCCCceeEEEEhh-hhHhh-CCCCeeccccc
Confidence 88876 89999998420 110 11222221 11110 0000
Q ss_pred c-ccCCcc------------------cCCCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC
Q psy13453 124 F-LFQHWQ------------------IPLGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP 184 (764)
Q Consensus 124 ~-d~~d~t------------------le~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P 184 (764)
. +...+. +-..-...+...|++++.++.+|+.++.++..++++++.+.|++.+.+.....+
T Consensus 257 ~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 336 (398)
T cd00613 257 AEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGP 336 (398)
T ss_pred cCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCC
Confidence 0 000000 011112344577999999999999999999999999999999998766544445
Q ss_pred CceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHH
Q psy13453 185 SMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEI 263 (764)
Q Consensus 185 ~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l 263 (764)
...+++|++.+. .+.-..++.++|.++|+.... ..+.+...+|++ .+..+++++|+.+++.|
T Consensus 337 ~~~~v~~~~~~~---------------~~~~~~~~~~~L~~~gi~~~~-~~~~~~~~lRis-~~~~~t~edid~~~~~L 398 (398)
T cd00613 337 FFHEFVLRLPPL---------------YGIRAEDLAKALIDGGFHAPT-MYLPVDGTLMIE-PTETETKEELDALLEAL 398 (398)
T ss_pred eeEEEEEEcCCc---------------chHHHHHHHHhhhhcCccccc-cccCCCCeEEEE-cCCCCCHHHHHHHHHhC
Confidence 566778865310 011235788888888875322 113455789996 47788999999998753
No 134
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.00 E-value=3.4e-09 Score=120.77 Aligned_cols=221 Identities=12% Similarity=0.054 Sum_probs=140.9
Q ss_pred ccccCCcceeeeeHHHHHhh----cCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCch
Q psy13453 11 AYPSETLSLLIYESFKATHS----LSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLN 86 (764)
Q Consensus 11 ~~~~~~~~~~~YSv~KAa~~----LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~ 86 (764)
++.++. .|.|..++++. .|+.. +.||++++ ++|+++|+++|+++ +-+++.+.+ +++|.+||++
T Consensus 157 Vlv~~~---~~~~~~~~~~~~~~~~G~~~---~~v~~~~~-~~d~~~l~~~i~~~-----t~~v~l~~p-n~tG~v~~l~ 223 (447)
T PRK00451 157 VLVSGA---VHPEYREVLKTYLKGQGIEV---VEVPYEDG-VTDLEALEAAVDDD-----TAAVVVQYP-NFFGVIEDLE 223 (447)
T ss_pred EEEeCc---cCHHHHHHHHHHHHhCCcEE---EEecCCCC-CCCHHHHHHhcCCC-----eEEEEEECC-CCCCeeCCHH
Confidence 566676 78889998876 46655 99999988 99999999999753 224455566 7799999999
Q ss_pred hhhc-----CCCcee--ccccc------------------ccc----------ceeeeecCCCcccccccc---------
Q psy13453 87 APVS-----NGPLKV--GGVLR------------------RVY----------SSCLVPRGQKSLRTTVLF--------- 122 (764)
Q Consensus 87 ~ia~-----~~wlHV--Da~l~------------------~~y----------~s~ll~rd~~~l~~~~s~--------- 122 (764)
+|++ ++|++| |+.-. +++ .+++..++ +.... +..
T Consensus 224 ~I~~~a~~~~~~~iv~~d~~~~g~~~~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~-~~~~~-~~~~~~g~~~~~ 301 (447)
T PRK00451 224 EIAEIAHAGGALFIVGVDPVSLGLLKPPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRK-KLVRQ-MPGRLVGETVDA 301 (447)
T ss_pred HHHHHHHHCCCEEEEEcChHHhccCCCcccCCCCEEEECCCcCCCCCCCCCCCchHHHhhH-HHHhh-CCCCEeeeeccc
Confidence 9887 889988 64210 010 01111111 00000 000
Q ss_pred ----cc--------ccCCc----ccCCCC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC
Q psy13453 123 ----HF--------LFQHW----QIPLGR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS 185 (764)
Q Consensus 123 ----~~--------d~~d~----tle~SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~ 185 (764)
.+ ++..+ ..-|++ ...++..++.++++|.+|+.++.++..++++++.+.|++.++++++..+.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 381 (447)
T PRK00451 302 DGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDGPF 381 (447)
T ss_pred CCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCCCe
Confidence 00 00000 011122 12335667778889999999999999999999999999999999885554
Q ss_pred ceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEE-E-Eecee-CCeeEEEEeccCCCCCHHHHHHHHHH
Q psy13453 186 MGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIY-I-VKGSF-QDRLFMRFAICSSQTEESDVQLGWNE 262 (764)
Q Consensus 186 l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~-v-s~t~l-~g~~~LRi~v~np~Tt~e~i~~~l~~ 262 (764)
+..+++++. .+ ..++.++|.++|..- + ..... ....++|+++... +++++++++++.
T Consensus 382 ~~~~~v~~~-----------------~~--~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~-~t~e~i~~l~~~ 441 (447)
T PRK00451 382 FNEFVVRLP-----------------KP--AEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEK-RTKEDIDALVAA 441 (447)
T ss_pred EEEEEEecC-----------------CC--HHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCC-CCHHHHHHHHHH
Confidence 555556531 01 146788888876531 1 01011 1124789875544 578899999999
Q ss_pred HHHH
Q psy13453 263 IRTA 266 (764)
Q Consensus 263 l~~~ 266 (764)
|+++
T Consensus 442 L~~~ 445 (447)
T PRK00451 442 LGEV 445 (447)
T ss_pred HHHH
Confidence 9865
No 135
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.00 E-value=1.2e-08 Score=112.27 Aligned_cols=220 Identities=13% Similarity=0.011 Sum_probs=143.2
Q ss_pred eeee--HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CC
Q psy13453 20 LIYE--SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NG 92 (764)
Q Consensus 20 ~~YS--v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~ 92 (764)
.||| +..++..+|... +.||+++++.+|+++|+++|++. ++-+++.+.+.+++|.+.|++++++ ++
T Consensus 83 ~~~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~l~~~i~~~----~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~ 155 (356)
T cd06451 83 GVFGDRWADMAERYGADV---DVVEKPWGEAVSPEEIAEALEQH----DIKAVTLTHNETSTGVLNPLEGIGALAKKHDA 155 (356)
T ss_pred CchhHHHHHHHHHhCCCe---EEeecCCCCCCCHHHHHHHHhcc----CCCEEEEeccCCCcccccCHHHHHHHHHhcCC
Confidence 3566 467888899876 99999988999999999999751 1235556778899999999999886 88
Q ss_pred Cceecccc--c------------------ccc------ceeeeecCCCccccccc--cc-cccCC---------cc-cC-
Q psy13453 93 PLKVGGVL--R------------------RVY------SSCLVPRGQKSLRTTVL--FH-FLFQH---------WQ-IP- 132 (764)
Q Consensus 93 wlHVDa~l--~------------------~~y------~s~ll~rd~~~l~~~~s--~~-~d~~d---------~t-le- 132 (764)
++++|+.. . +++ +++++.+++ ....... .. ..+.+ .. ..
T Consensus 156 ~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (356)
T cd06451 156 LLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSER-ALERIKKKTKPKGFYFDLLLLLKYWGEGYSYP 234 (356)
T ss_pred EEEEeeehhccCccccccccCccEEEecCchhccCCCCcceeEECHH-HHHHHHhcCCCCceeecHHHHHhhhcccCCCC
Confidence 99999942 1 110 023333321 1111000 00 00000 00 00
Q ss_pred CCCcc-cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC--ceeEE-EEeeccccccccccccCc
Q psy13453 133 LGRRF-RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS--MGLVC-FRLKVRFWDKLDNLFGTI 208 (764)
Q Consensus 133 ~SRr~-~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~--l~iV~-Fry~P~~~~~~~~~~~~~ 208 (764)
++-.. ....++++++.+..+|+.+..++..++++++.+.+++. +++++.+|. .+.++ ++. |++
T Consensus 235 ~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-~~~----------- 301 (356)
T cd06451 235 HTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GLKLLAKPELRSPTVTAVLV-PEG----------- 301 (356)
T ss_pred CCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCCceEEEEC-CCC-----------
Confidence 00111 12466888999999999999999999999999999987 898886543 44444 333 211
Q ss_pred cCCccHHHHHHHHHHHhc-CcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 209 SFGDNDLNKAVYDRIIAR-KVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 209 ~~~~d~~n~~L~~~L~~~-G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
.+ ..++.++|.++ |+............++|+++ ++.+++++++++++.++++
T Consensus 302 ---~~--~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~-~~~~~~e~v~~~~~~l~~~ 354 (356)
T cd06451 302 ---VD--GDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGH-MGEATREDVLGVLSALEEA 354 (356)
T ss_pred ---CC--HHHHHHHHHHhCCEEEecccccccCCEEEEec-CCCCCHHHHHHHHHHHHHH
Confidence 11 24688888888 87554332222235899964 4558899999999999875
No 136
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=98.97 E-value=3.4e-08 Score=111.42 Aligned_cols=170 Identities=14% Similarity=0.101 Sum_probs=114.7
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 552 FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 552 ~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
..|..+|...++|+.+ ++++|.+. .++|++||.|+.++..+ ..+ +.
T Consensus 72 d~Yagd~s~~~LE~~v----Ae~lG~e~-----------aV~v~sGTaAl~ll~~l----~v~---------------pG 117 (460)
T PRK13237 72 EAYAGSRNFYHLEETV----QEYYGFKH-----------VVPTHQGRGAENLLSRI----AIK---------------PG 117 (460)
T ss_pred hhhcCCCcHHHHHHHH----HHHHCCCe-----------EEEeCCHHHHHHHHHHh----CCC---------------Cc
Confidence 5688999999999855 55667643 68999999998764221 011 11
Q ss_pred eEEEecCCcchhHHHH-HHhCCCceEEEec----------CCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccc-
Q psy13453 632 LVAYTSDQSNSSVEKS-AIIGDVPVRQLRS----------DDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCA- 699 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kA-a~~lGl~v~~Vp~----------d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Ga- 699 (764)
-+ ++...|++-.++ ....|....-+.+ ..+|.||+++|+++|++... ..+-+|+++..++..|.
T Consensus 118 d~--Vp~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~--~~~~lV~a~itvn~~GGq 193 (460)
T PRK13237 118 QY--VPGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGA--ENIAYICLAVTVNLAGGQ 193 (460)
T ss_pred CE--ECCccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccC--CccCceEEEEecccCCCe
Confidence 12 277778877777 4556664333321 14689999999999975321 22335556666666642
Q ss_pred ---cccHHHHHHHHHhcCCEEEEecccccccc-ccc----hhhhhh------cCCCcccEEEEcCCccCCCCcC
Q psy13453 700 ---FDNLEELGPICQEYNIWLHVDAAYAGSAL-LLP----EYAHLK------RGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 700 ---iDpl~eIa~i~~~~glwLHVDaA~Gg~~l-~~~----~~r~~l------~gie~aDSit~d~HK~l~~P~~ 759 (764)
.+++++|.++|++||+++|.|||...... +.. .|+..- +-...+|.+++|+||-+.+|.|
T Consensus 194 pvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~G 267 (460)
T PRK13237 194 PVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIG 267 (460)
T ss_pred eCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCc
Confidence 46899999999999999999999875422 331 122110 1134789999999999999875
No 137
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=98.97 E-value=2e-08 Score=113.89 Aligned_cols=170 Identities=18% Similarity=0.179 Sum_probs=115.4
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 552 FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 552 ~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
..|..++...++|+.+.++ +|.+ ..++|+|||+|+..++.+... . ++
T Consensus 47 ~~Y~~~~g~~~Leeaia~~----~g~~-----------~vv~t~~Gt~Al~la~~al~~----p--------------GD 93 (431)
T cd00617 47 EAYAGSKSFYDLEDAVQDL----FGFK-----------HIIPTHQGRGAENILFSILLK----P--------------GR 93 (431)
T ss_pred CccCCCCCHHHHHHHHHHH----HCCC-----------eEEEcCCHHHHHHHHHHHhCC----C--------------CC
Confidence 3588888888888876554 4553 368999999999888764311 0 12
Q ss_pred eEEEecCCcchhHHHH-HHhCCCceEEEecCC----------CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCc-cc
Q psy13453 632 LVAYTSDQSNSSVEKS-AIIGDVPVRQLRSDD----------NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGT-CA 699 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kA-a~~lGl~v~~Vp~d~----------~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~-Ga 699 (764)
+| . ...||....+ ..+.|...+.+++++ .|.||+++|+++|.+... ..+.+|+.+..++.+ |.
T Consensus 94 -~V-~-~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~--~~~~~I~v~~p~N~~gG~ 168 (431)
T cd00617 94 -TV-P-SNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGA--ENIPYIVLTITNNTAGGQ 168 (431)
T ss_pred -EE-c-cCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccC--CCccEEEEECCcCCCCCc
Confidence 33 3 4577765544 566899999999873 245999999999975311 124466666666665 65
Q ss_pred c---ccHHHHHHHHHhcCCEEEEecccccc-cccc----chhh-----hh-hcCCCcccEEEEcCCccCCCCcC
Q psy13453 700 F---DNLEELGPICQEYNIWLHVDAAYAGS-ALLL----PEYA-----HL-KRGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 700 i---Dpl~eIa~i~~~~glwLHVDaA~Gg~-~l~~----~~~r-----~~-l~gie~aDSit~d~HK~l~~P~~ 759 (764)
. ++|++|+++|++||+|+|.|+|+... +.+. +.++ .. ..-...+|++++++||-+.+|.|
T Consensus 169 ~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~G 242 (431)
T cd00617 169 PVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIG 242 (431)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccc
Confidence 5 57788999999999999999995532 2221 1111 11 11124689999999998888864
No 138
>PRK10534 L-threonine aldolase; Provisional
Probab=98.97 E-value=1.1e-08 Score=111.88 Aligned_cols=185 Identities=19% Similarity=0.156 Sum_probs=113.5
Q ss_pred ChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHh
Q psy13453 534 SYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMI 613 (764)
Q Consensus 534 ~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~ 613 (764)
..+.+...++. .. .....|...|...++|+.+ ++++|.++ .++++||+++++.++.+...
T Consensus 12 p~~~~~~a~~~-~~-~~~~~Y~~~~~~~~L~~~l----a~~~g~~~-----------~~v~~~g~~a~~~~l~~~~~--- 71 (333)
T PRK10534 12 PSRAMLEAMMA-AP-VGDDVYGDDPTVNALQDYA----AELSGKEA-----------ALFLPTGTQANLVALLSHCE--- 71 (333)
T ss_pred CCHHHHHHHHh-cc-CCCcccCCCHHHHHHHHHH----HHHhCCCe-----------EEEeCchHHHHHHHHHHhcC---
Confidence 33455555433 22 2233344567777777755 55677754 37999999999888875311
Q ss_pred hhhccCCCCCccccccCceEEEecCCcchhHHHH--HHhCC-CceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEE
Q psy13453 614 NHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKS--AIIGD-VPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIA 690 (764)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kA--a~~lG-l~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~Vva 690 (764)
+ .-.|+++...|.+..++ +..+| +.++.++.++++.+|+++|+++|.+...++..+-+|+.
T Consensus 72 ~----------------gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l 135 (333)
T PRK10534 72 R----------------GEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSL 135 (333)
T ss_pred C----------------CCeeEEechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEE
Confidence 1 11355777777544433 34444 67777887888999999999998653222212334444
Q ss_pred eeccCCccccccHHHH---HHHHHhcCCEEEEeccccccccc--cchhhhhhcCCCcccEEEEcCCccCCCCcC
Q psy13453 691 TLGTTGTCAFDNLEEL---GPICQEYNIWLHVDAAYAGSALL--LPEYAHLKRGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 691 taGTT~~GaiDpl~eI---a~i~~~~glwLHVDaA~Gg~~l~--~~~~r~~l~gie~aDSit~d~HK~l~~P~~ 759 (764)
. ++.+|++-|.++| +++|++|++|++||.||.-.... ........ ...|.++++++|.++.+.|
T Consensus 136 ~--np~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~---~~~~~~~~s~SK~~~~~~G 204 (333)
T PRK10534 136 E--NTHNGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEIT---QYCDSFTICLSKGLGTPVG 204 (333)
T ss_pred e--cCCCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHH---hcCCEEEEEeEcCCCCccc
Confidence 3 4556998766655 56789999999999997622110 11111111 2347777899998887743
No 139
>PRK12414 putative aminotransferase; Provisional
Probab=98.96 E-value=1.5e-08 Score=113.21 Aligned_cols=174 Identities=11% Similarity=0.060 Sum_probs=122.4
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCce
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKL 632 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~ 632 (764)
.|........+.+.+.+|+++++|.+-+ .....++|+|+++++..++.+. .. +..
T Consensus 61 ~Y~~~~G~~~lr~~ia~~l~~~~g~~~~------~~~~i~it~g~~~al~~~~~~l----~~---------------~gd 115 (384)
T PRK12414 61 QYAPMAGIAALREALAEKTERLYGARYD------PASEVTVIASASEGLYAAISAL----VH---------------PGD 115 (384)
T ss_pred CcCCCCCcHHHHHHHHHHHHHHhCCCCC------CCCcEEEECChHHHHHHHHHHh----cC---------------CCC
Confidence 3444455678888999999999998521 0125789999999876655432 11 122
Q ss_pred EEEecCCcchhHHHHHHhCCCceEEEecCC-CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHHHH
Q psy13453 633 VAYTSDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEELGP 708 (764)
Q Consensus 633 vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~-~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eIa~ 708 (764)
.|++++-+|......++..|.+++.||+++ ++.+|+++|++++++. +-+|+.+..++.||.+ +++++|++
T Consensus 116 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~NPTG~~~s~~~~~~i~~ 189 (384)
T PRK12414 116 EVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITPR------TRMIIVNTPHNPSATVFSAADLARLAQ 189 (384)
T ss_pred EEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcCcc------cEEEEEcCCCCCCCcCCCHHHHHHHHH
Confidence 467778888888888888999999999974 5789999999988542 3466677889999997 68999999
Q ss_pred HHHhcCCEEEEeccccccccccchhhhh--hcCCCcccEEEEcCCccCCCC
Q psy13453 709 ICQEYNIWLHVDAAYAGSALLLPEYAHL--KRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 709 i~~~~glwLHVDaA~Gg~~l~~~~~r~~--l~gie~aDSit~d~HK~l~~P 757 (764)
+|++||+|+.+|.+|.-...-....... +.++..---+.-++.|.++.|
T Consensus 190 ~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~p 240 (384)
T PRK12414 190 LTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVT 240 (384)
T ss_pred HHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCc
Confidence 9999999999999998533211111010 111111125677899988655
No 140
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=98.96 E-value=8.7e-09 Score=115.88 Aligned_cols=229 Identities=12% Similarity=0.018 Sum_probs=140.5
Q ss_pred ccccCCcceeeeeHHHHHhhc---CCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchh
Q psy13453 11 AYPSETLSLLIYESFKATHSL---SGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNA 87 (764)
Q Consensus 11 ~~~~~~~~~~~YSv~KAa~~L---Gl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ 87 (764)
+..++. .|+|+.+++..+ |+.. +.||+++++.+|+++|+++|+++ +-+++-+..++++|.+.|+++
T Consensus 95 Vi~~~~---~h~s~~~~~~~~~~~g~~v---~~v~~~~~~~~d~~~l~~~l~~~-----~~lv~v~~~~n~tG~~~~~~~ 163 (402)
T TIGR02006 95 IITSKT---EHKAVLDTCRYLEREGFEV---TYLPPKSNGLIDLEELKAAIRDD-----TILVSIMHVNNEIGVIQDIAA 163 (402)
T ss_pred EEECCC---ccHHHHHHHHHHHhcCCEE---EEEccCCCCcCCHHHHHHhcCCC-----CEEEEEECCCcCceecccHHH
Confidence 444444 688888776554 6654 99999999999999999998653 224457889999999999999
Q ss_pred hhc-----CCCceecccc--------------------ccc----c-ceeeeecCCCccccccccccccCCc--ccC-CC
Q psy13453 88 PVS-----NGPLKVGGVL--------------------RRV----Y-SSCLVPRGQKSLRTTVLFHFLFQHW--QIP-LG 134 (764)
Q Consensus 88 ia~-----~~wlHVDa~l--------------------~~~----y-~s~ll~rd~~~l~~~~s~~~d~~d~--tle-~S 134 (764)
|++ ++|+|||++. .++ . +++++.+++....... ....+++ ..+ ++
T Consensus 164 I~~l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~--~~~g~~~~~~~~~gt 241 (402)
T TIGR02006 164 IGEICRERKVFFHVDAAQSVGKIPINVNELKVDLMSISGHKIYGPKGIGALYVRRKPRVRLEA--LIHGGGHERGMRSGT 241 (402)
T ss_pred HHHHHHHcCCEEEEEcchhcCCcccCccccCCCEEEEehhhhcCCCceEEEEEccCCCCCCCc--eecCCCccCCccCCC
Confidence 886 8899999942 111 1 1355555432211100 0000000 111 22
Q ss_pred Ccc-cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC--c---eeEEEEeeccccccccccccCc
Q psy13453 135 RRF-RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS--M---GLVCFRLKVRFWDKLDNLFGTI 208 (764)
Q Consensus 135 Rr~-~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~--l---~iV~Fry~P~~~~~~~~~~~~~ 208 (764)
-.. ..+.+-.+++.+ .+++.++.++.-.+++++.+.|++.++++++++++ . .+|+|+..+
T Consensus 242 ~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~------------- 307 (402)
T TIGR02006 242 LPTHQIVGMGEAFRIA-KEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVE------------- 307 (402)
T ss_pred ccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeCcC-------------
Confidence 212 223444555544 46788888999999999999999999999886543 2 246665321
Q ss_pred cCCccHHHHHHHHHHHhcCcEEEEecee--------------CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 209 SFGDNDLNKAVYDRIIARKVIYIVKGSF--------------QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 209 ~~~~d~~n~~L~~~L~~~G~~~vs~t~l--------------~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
.+.+..++.+.....|... +.... ....++|+++ .+.+|++||+.+++.|+++.+.+.
T Consensus 308 ---~~~~~~~l~~i~v~~G~~c-~~~~~~~~~~l~~lg~~~~~~~~~vR~S~-~~~~t~edid~l~~~l~~~~~~~~ 379 (402)
T TIGR02006 308 ---GESLIMALKDLAVSSGSAC-TSASLEPSYVLRALGINDELAHSSIRFTI-GRFTTEEEIDYAVKLVKSAIDKLR 379 (402)
T ss_pred ---HHHHHHhcCCEEEechhhc-CCCCCCccHHHHHcCCChhhcCceEEEEe-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1122222211111222221 11100 0125799976 566899999999999999887753
No 141
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=98.96 E-value=4.1e-08 Score=109.30 Aligned_cols=222 Identities=10% Similarity=-0.014 Sum_probs=140.6
Q ss_pred eeeeHHHHHhh---cCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----C
Q psy13453 20 LIYESFKATHS---LSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----N 91 (764)
Q Consensus 20 ~~YSv~KAa~~---LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~ 91 (764)
.|.|+.+.... .|+.. +.||+++++++|+++|+++|+++ +-+++-+..++++|.+.|+++|++ +
T Consensus 95 ~~~s~~~~~~~~~~~G~~v---~~v~~~~~g~~~~~~l~~~i~~~-----~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g 166 (379)
T TIGR03402 95 EHPAVLSLCQHLEKQGYKV---TYLPVDEEGRLDLEELRAAITDD-----TALVSVMWANNETGTIFPIEEIGEIAKERG 166 (379)
T ss_pred ccHHHHHHHHHHHHcCCEE---EEEccCCCCcCCHHHHHHhcCCC-----cEEEEEEcccCCeeecccHHHHHHHHHHcC
Confidence 46666544443 47665 99999989999999999999753 224456778889999999999886 7
Q ss_pred CCceeccccc--------------------ccc----c-eeeeecCCCccccccccccccCCcccC-CCCcccH-HHHHH
Q psy13453 92 GPLKVGGVLR--------------------RVY----S-SCLVPRGQKSLRTTVLFHFLFQHWQIP-LGRRFRA-LKLWM 144 (764)
Q Consensus 92 ~wlHVDa~l~--------------------~~y----~-s~ll~rd~~~l~~~~s~~~d~~d~tle-~SRr~~A-LklWa 144 (764)
+++|||+... +++ + ++++.+....+.-.+.. .......+ ++-...+ +.+-+
T Consensus 167 ~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~g~l~v~~~~~~~p~~~g--~~~~~~~~~gt~~~~~~~~l~~ 244 (379)
T TIGR03402 167 ALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKLHGPKGVGALYIRKGTRFRPLLRG--GHQERGRRAGTENVPGIVGLGK 244 (379)
T ss_pred CEEEEECcccccccccCcccCCCCEEEEcHHHcCCCCceEEEEECCCCCCCCcccC--CccCCCcCCCCccHHHHHHHHH
Confidence 8999999421 111 1 34444433211111000 00000011 1111112 23334
Q ss_pred HHHHccHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEeCCCC---ceeEEEEeeccccccccccccCccCCccHHHHHHH
Q psy13453 145 TLRSYGLKGLQAYLRKHISLAKKFADLVEQ-DDRFELVCPPS---MGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVY 220 (764)
Q Consensus 145 tL~~lG~eGy~~~i~~~i~lA~~l~~~I~~-~p~~ell~~P~---l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~ 220 (764)
+++ +..+++.++.++.-++++++.+.+++ ++++++.+++. -+++.|.+.. .+ ..++.
T Consensus 245 al~-~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~--~~~~~ 305 (379)
T TIGR03402 245 AAE-LATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEY----------------IE--GEAIL 305 (379)
T ss_pred HHH-HHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecC----------------CC--HHHHH
Confidence 444 34667888888999999999999996 89999988654 2477776531 11 13677
Q ss_pred HHHHhcCcEEEEecee-------------------CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 221 DRIIARKVIYIVKGSF-------------------QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 221 ~~L~~~G~~~vs~t~l-------------------~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
+.|.+.|....+...- .....+|++ .+..+|++||+.+++.|+++.+.+.
T Consensus 306 ~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S-~~~~~t~~di~~~~~~l~~~~~~~~ 374 (379)
T TIGR03402 306 LLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFS-LSRYNTEEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred HhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEE-cCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7777777654432210 012579996 5777889999999999999877654
No 142
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=98.95 E-value=1.8e-08 Score=112.08 Aligned_cols=163 Identities=12% Similarity=0.013 Sum_probs=113.0
Q ss_pred chHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEec
Q psy13453 558 PACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTS 637 (764)
Q Consensus 558 p~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S 637 (764)
.....+-.++.+++++++|.+. .+++++|+++++.++.+.. . +...|+++
T Consensus 74 ~g~~~l~~~l~~~l~~~~g~~~-----------~i~~~sG~~a~~~a~~~~~----~---------------~gd~vi~~ 123 (385)
T TIGR01825 74 AGTLRLHEELEEKLAKFKKTEA-----------ALVFQSGFNTNQGVLSALL----R---------------KGDIVLSD 123 (385)
T ss_pred cCCcHHHHHHHHHHHHHhCCCc-----------EEEECcHHHHHHHHHHHhC----C---------------CCCEEEEE
Confidence 3445677788889999988543 2455556888887665431 1 11257788
Q ss_pred CCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEE
Q psy13453 638 DQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWL 717 (764)
Q Consensus 638 ~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwL 717 (764)
...|.+...++...|..+..++ .+|++++++.+.+... ..+.+|+...-.+.+|.+.|+++|+++|++||+|+
T Consensus 124 ~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~--~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~l 196 (385)
T TIGR01825 124 ELNHASIIDGLRLTKATKKIYK-----HADMDDLDRVLRENPS--YGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVT 196 (385)
T ss_pred ccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhcc--CCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEE
Confidence 8999999988888888766553 5889999998876432 23456655555678899999999999999999999
Q ss_pred EEeccccccccccc-hhhhhhcCC-CcccEEEEcCCccCCCC
Q psy13453 718 HVDAAYAGSALLLP-EYAHLKRGL-EYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 718 HVDaA~Gg~~l~~~-~~r~~l~gi-e~aDSit~d~HK~l~~P 757 (764)
++|.+|+.+.+... ......-++ ...|-+..++||+++.+
T Consensus 197 i~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 238 (385)
T TIGR01825 197 YVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVV 238 (385)
T ss_pred EEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcC
Confidence 99999976543210 000000122 24577889999999764
No 143
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=98.95 E-value=2.5e-08 Score=112.22 Aligned_cols=219 Identities=11% Similarity=0.060 Sum_probs=148.5
Q ss_pred eHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceec
Q psy13453 23 ESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVG 97 (764)
Q Consensus 23 Sv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVD 97 (764)
.+.+.++..|+.. +.||+++++++|+++|+++|+++ +-+++-+..+.++|.+-|++++++ +++++||
T Consensus 129 ~~~~~~~~~g~~v---~~v~~~~~~~~d~~~l~~~i~~~-----t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD 200 (406)
T PRK09295 129 PWQMLCARVGAEL---RVIPLNPDGTLQLETLPALFDER-----TRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVD 200 (406)
T ss_pred HHHHHHHHcCcEE---EEEecCCCCCCCHHHHHHhcCCC-----cEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEE
Confidence 4567788889877 99999999999999999999653 224457789999999999999876 7899999
Q ss_pred ccc--------------------ccc-c---c-eeeeecCCC--ccccccc---c--cccc-CC-------cccC-CCCc
Q psy13453 98 GVL--------------------RRV-Y---S-SCLVPRGQK--SLRTTVL---F--HFLF-QH-------WQIP-LGRR 136 (764)
Q Consensus 98 a~l--------------------~~~-y---~-s~ll~rd~~--~l~~~~s---~--~~d~-~d-------~tle-~SRr 136 (764)
++. .++ + + ++++.+.+. .+...+. . ..++ .. +.++ |+..
T Consensus 201 ~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~ 280 (406)
T PRK09295 201 GAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPN 280 (406)
T ss_pred cccccCccccCchhcCCCEEEeehhhccCCCCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCcc
Confidence 942 122 1 1 344444321 0110000 0 0000 00 1122 2342
Q ss_pred -ccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC-CceeEEEEeeccccccccccccCccCCccH
Q psy13453 137 -FRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP-SMGLVCFRLKVRFWDKLDNLFGTISFGDND 214 (764)
Q Consensus 137 -~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P-~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~ 214 (764)
...+.++++++.+-..|+.++.++.-++++++.+.|+++++++++++. ..++|+|.+.. .+
T Consensus 281 ~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~----------------~~- 343 (406)
T PRK09295 281 TGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGK----------------HH- 343 (406)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEECC----------------cC-
Confidence 234588999999888889888899999999999999999999998752 36799997531 11
Q ss_pred HHHHHHHHHHhcCcEEEEec--------eeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 215 LNKAVYDRIIARKVIYIVKG--------SFQDRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 215 ~n~~L~~~L~~~G~~~vs~t--------~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
...+.+.|.+.|....+.. .+..+.++|++ .+..++++|++.+++.|+++.+
T Consensus 344 -~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS-~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 344 -AYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRAS-LAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred -HHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEE-ccCCCCHHHHHHHHHHHHHHHH
Confidence 1356677777886543321 01112479996 5577899999999999998754
No 144
>PLN02483 serine palmitoyltransferase
Probab=98.94 E-value=2.3e-08 Score=115.44 Aligned_cols=203 Identities=15% Similarity=0.131 Sum_probs=127.4
Q ss_pred CCCCCCccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCCh
Q psy13453 518 THWQSPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTA 597 (764)
Q Consensus 518 ~~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGg 597 (764)
.++.+-.|+|+-...+.....+.+.+..+--....... .-..+....++.+.+++++|.++ .++.++|
T Consensus 103 ~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~-~~g~~~~~~ele~~lA~~~g~~~-----------ai~~~~G 170 (489)
T PLN02483 103 LNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRV-DGGTTKLHRELEELVARFVGKPA-----------AIVFGMG 170 (489)
T ss_pred EEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCcccc-ccCCcHHHHHHHHHHHHHhCCCc-----------EEEECCH
Confidence 35778889998754444444455555443211111110 01123444555667788888543 3555567
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHH
Q psy13453 598 SEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKE 677 (764)
Q Consensus 598 TeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~ 677 (764)
+.+|+.++.+. .. +...|++++.+|.|+..+++..|++++.+|.+ |+++|++.+++
T Consensus 171 ~~an~~~i~al----~~---------------~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-----d~~~le~~l~~ 226 (489)
T PLN02483 171 YATNSTIIPAL----IG---------------KGGLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLRE 226 (489)
T ss_pred HHHHHHHHHHh----CC---------------CCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHh
Confidence 77787554431 11 12357899999999999999999999999864 57888888775
Q ss_pred hhhcCC----Cc--eEEEEeecc-CCccccccHHHHHHHHHhcCCEEEEeccccccccccchhh--hhhcCC--CcccEE
Q psy13453 678 DLAKGL----IP--CCLIATLGT-TGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYA--HLKRGL--EYVDSF 746 (764)
Q Consensus 678 ~~~~G~----~p--~~VvataGT-T~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r--~~l~gi--e~aDSi 746 (764)
....+. .| -+++.+-|. +..|.+.++++|+++|++||+|+++|.||+.+.+ -+..+ ....++ ..+|-+
T Consensus 227 ~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~-G~~G~g~~~~~~v~~~~~dI~ 305 (489)
T PLN02483 227 QIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAV-GKTGRGVCELLGVDPADVDIM 305 (489)
T ss_pred hhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCcc-CCCCCchHHhcCCCcccCcEE
Confidence 432221 11 233334443 6789999999999999999999999999975432 11111 011122 346888
Q ss_pred EEcCCccCCCC
Q psy13453 747 DFNTHKWLLVN 757 (764)
Q Consensus 747 t~d~HK~l~~P 757 (764)
..++||.++.+
T Consensus 306 ~~SfSKs~g~~ 316 (489)
T PLN02483 306 MGTFTKSFGSC 316 (489)
T ss_pred EEecchhcccC
Confidence 99999998753
No 145
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=98.94 E-value=3.2e-08 Score=108.40 Aligned_cols=158 Identities=18% Similarity=0.098 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
+..++.+.+++++|.+. .+++++|+++++.++.+. .. ++..|++++.+|.
T Consensus 62 ~~~~l~~~la~~~~~~~-----------~i~~~~G~~~~~~~l~~~----~~---------------~gd~v~~~~~~~~ 111 (360)
T TIGR00858 62 LHEELEEELAEWKGTEA-----------ALLFSSGYLANVGVISAL----VG---------------KGDLILSDALNHA 111 (360)
T ss_pred HHHHHHHHHHHHhCCCC-----------EEEECchHHHHHHHHHHh----CC---------------CCCEEEEEccccH
Confidence 34445566677666432 466666788877655432 11 1225778889999
Q ss_pred hHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEecc
Q psy13453 643 SVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAA 722 (764)
Q Consensus 643 Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA 722 (764)
+...++...|.+++.++. +|+++|++.+++.. +..+.+|+.....+.+|.+.|+++|.++|+++|+++++|.+
T Consensus 112 ~~~~~~~~~g~~~~~~~~-----~d~~~l~~~~~~~~--~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~ 184 (360)
T TIGR00858 112 SLIDGCRLSGARVRRYRH-----NDVEHLERLLEKNR--GERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDA 184 (360)
T ss_pred HHHHHHHhcCCceEEecC-----CCHHHHHHHHHHcc--cCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECc
Confidence 999999999999888763 68999999986532 11244666555667899999999999999999999999999
Q ss_pred ccccccccc-hhhhhhcCC--CcccEEEEcCCccCCCC
Q psy13453 723 YAGSALLLP-EYAHLKRGL--EYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 723 ~Gg~~l~~~-~~r~~l~gi--e~aDSit~d~HK~l~~P 757 (764)
|+.+.+... .......++ ...|-+..++||+++.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~ 222 (360)
T TIGR00858 185 HGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSY 222 (360)
T ss_pred ccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhcc
Confidence 975432111 000111223 13578888999998753
No 146
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.94 E-value=1.3e-08 Score=115.54 Aligned_cols=151 Identities=12% Similarity=0.062 Sum_probs=110.8
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEe
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT 636 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~ 636 (764)
.|....+|+ .++++.|.+. .+++++|+.|+..++.+... +...|++
T Consensus 62 ~p~~~~le~----~lA~l~g~~~-----------al~~~SG~~Ai~~al~all~-------------------pGd~VIv 107 (427)
T PRK05994 62 NPTNAVLEE----RVAALEGGTA-----------ALAVASGHAAQFLVFHTLLQ-------------------PGDEFIA 107 (427)
T ss_pred CccHHHHHH----HHHHHhCCCc-----------EEEEcCHHHHHHHHHHHHhC-------------------CCCEEEE
Confidence 455555555 6677777643 68899999999877765411 1124667
Q ss_pred cCCcchhHHH----HHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh
Q psy13453 637 SDQSNSSVEK----SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE 712 (764)
Q Consensus 637 S~~aH~Sv~k----Aa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~ 712 (764)
+...|.+..+ .+...|+.++.++++ |+++++++|++. +-+|+....++.+|.+-|+++|+++|++
T Consensus 108 ~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~ai~~~------tklV~vesp~NptG~v~dl~~I~~la~~ 176 (427)
T PRK05994 108 ARKLYGGSINQFGHAFKSFGWQVRWADAD-----DPASFERAITPR------TKAIFIESIANPGGTVTDIAAIAEVAHR 176 (427)
T ss_pred ecCcchhHHHHHHHHHHhcCcEEEEECCC-----CHHHHHHhcCcC------CeEEEEECCCCCCCeecCHHHHHHHHHH
Confidence 7777765433 356678888888764 789999988653 3477778888999999999999999999
Q ss_pred cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC
Q psy13453 713 YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 713 ~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~ 759 (764)
+|++++||.+|+.+...-| .- -.+|-++.++|||++.+-+
T Consensus 177 ~gi~livD~a~a~~~~~~p----l~---~gaDivv~S~tK~lgg~~~ 216 (427)
T PRK05994 177 AGLPLIVDNTLASPYLIRP----IE---HGADIVVHSLTKFLGGHGN 216 (427)
T ss_pred cCCEEEEECCccccccCCc----cc---cCCcEEEEcCccccCCCCC
Confidence 9999999999986543222 11 1469999999999987653
No 147
>PRK08912 hypothetical protein; Provisional
Probab=98.94 E-value=3.2e-08 Score=110.61 Aligned_cols=179 Identities=13% Similarity=0.030 Sum_probs=125.4
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCC-cEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPG-GGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~-~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
.|.......++.+.+.+|+.+..|++-+ .. ..++|+|+++++..++.+. .. +.
T Consensus 58 ~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-------~~~~i~~t~G~~~al~~~~~~~----~~---------------~g 111 (387)
T PRK08912 58 QYPPMMGLPELRQAVAAHYARFQGLDLD-------PETEVMVTSGATEALAAALLAL----VE---------------PG 111 (387)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhCCCCC-------CcccEEEeCCcHHHHHHHHHHh----cC---------------CC
Confidence 3444444567888888898888786432 12 5789999999875554422 11 12
Q ss_pred eEEEecCCcchhHHHHHHhCCCceEEEecCC-CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHHH
Q psy13453 632 LVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEELG 707 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~-~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eIa 707 (764)
..|++..-+|.....++...|.+++.+|+++ ++.+|+++|++.+... +-+|+.+..++.||.+-+ +++|.
T Consensus 112 d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~s~~~~~~i~ 185 (387)
T PRK08912 112 DEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSPR------TKAVLLNNPLNPAGKVFPREELALLA 185 (387)
T ss_pred CEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCcc------ceEEEEeCCCCCcCcccCHHHHHHHH
Confidence 2577788889999999999999999999974 6789999999987542 336667788999998854 77799
Q ss_pred HHHHhcCCEEEEeccccccccccchhhh--hhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 708 PICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 708 ~i~~~~glwLHVDaA~Gg~~l~~~~~r~--~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
++|++|++|+++|.+|+....--..+.. .+.++..-+-+..+++|.++.| .-+|.+
T Consensus 186 ~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~ 244 (387)
T PRK08912 186 EFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFV 244 (387)
T ss_pred HHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEE
Confidence 9999999999999999754321111111 1223323357889999988744 235554
No 148
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=98.94 E-value=1.3e-08 Score=116.01 Aligned_cols=140 Identities=14% Similarity=0.111 Sum_probs=103.4
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEe
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT 636 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~ 636 (764)
++...++|+ .+++++|.+ ..++|++||++++.++.+....+..+. +..++-.|++
T Consensus 62 G~~~~~fe~----~lA~~~g~~-----------~~v~~~sGt~al~~aL~al~~~~~~~~----------~~~pGd~VIv 116 (438)
T PRK15407 62 GRFNDAFEK----KLAEFLGVR-----------YALLVNSGSSANLLAFSALTSPKLGDR----------ALKPGDEVIT 116 (438)
T ss_pred ChhHHHHHH----HHHHHhCCC-----------eEEEECCHHHHHHHHHHHHhhcccccc----------CCCCCCEEEE
Confidence 344455555 556666653 368999999999998876543322110 1122346889
Q ss_pred cCCcchhHHHHHHhCCCceEEEecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCC
Q psy13453 637 SDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNI 715 (764)
Q Consensus 637 S~~aH~Sv~kAa~~lGl~v~~Vp~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~gl 715 (764)
+..+|.+...++...|..++.++++ +++.+|+++++++|.+.. -+|+.+. ..|...++++|.++|++||+
T Consensus 117 ~~~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~~t------kaVi~~~---~~G~p~dl~~I~~la~~~gi 187 (438)
T PRK15407 117 VAAGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSPKT------KAIMIAH---TLGNPFDLAAVKAFCDKHNL 187 (438)
T ss_pred CCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCcCC------eEEEEeC---CCCChhhHHHHHHHHHHCCC
Confidence 9999999999999999999999987 578999999999986532 2555543 35667799999999999999
Q ss_pred EEEEecccccccccc
Q psy13453 716 WLHVDAAYAGSALLL 730 (764)
Q Consensus 716 wLHVDaA~Gg~~l~~ 730 (764)
++++|+||+.+....
T Consensus 188 ~vIeDaa~a~G~~~~ 202 (438)
T PRK15407 188 WLIEDNCDALGSTYD 202 (438)
T ss_pred EEEEECccchhhhcC
Confidence 999999998776553
No 149
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=98.93 E-value=1.4e-08 Score=114.12 Aligned_cols=152 Identities=14% Similarity=0.105 Sum_probs=110.6
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|....+|+ .+++++|.+. .+++++|+.++..++.+.. . +.-.|+
T Consensus 57 ~~p~~~~le~----~lA~l~g~~~-----------av~~~sG~~Ai~~~l~al~----~---------------~Gd~Vi 102 (391)
T TIGR01328 57 GNPTVSNLEG----RIAFLEGTEA-----------AVATSSGMGAIAATLLTIL----K---------------AGDHLI 102 (391)
T ss_pred CCchHHHHHH----HHHHHhCCCc-----------EEEECCHHHHHHHHHHHHh----C---------------CCCEEE
Confidence 4566666776 6777777643 5889999998877664431 1 112356
Q ss_pred ecCCcch----hHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNS----SVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~----Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...|. .+...+...|+.++.++.+ |+++++++|.+. +-+|+....++.+|.+-|+++|+++|+
T Consensus 103 ~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~-----d~e~l~~~i~~~------tklV~le~p~Np~G~v~dl~~I~~la~ 171 (391)
T TIGR01328 103 SDECLYGCTFALLEHALTKFGIQVDFINMA-----IPEEVKAHIKDN------TKIVYFETPANPTMKLIDMERVCRDAH 171 (391)
T ss_pred EecCcchHHHHHHHHHHhcCCeEEEEECCC-----CHHHHHHhhccC------CeEEEEECCCCCCCcccCHHHHHHHHH
Confidence 6666553 3445566688888888765 789999888653 347777788889999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~ 759 (764)
++|++++||+||+.+....+ .- ..+|.++.+++|+++.+-+
T Consensus 172 ~~gi~livD~a~a~~~~~~~----~~---~g~Divv~S~sK~lgg~g~ 212 (391)
T TIGR01328 172 SQGVKVIVDNTFATPMLTNP----VA---LGVDVVVHSATKYIGGHGD 212 (391)
T ss_pred HcCCEEEEECCCchhccCCc----hh---cCCCEEEccccccccCCCC
Confidence 99999999999986543221 11 2479999999999997764
No 150
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=98.93 E-value=8.9e-09 Score=112.98 Aligned_cols=162 Identities=15% Similarity=0.072 Sum_probs=113.3
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
++.+.+++++|.++ ...++|+|+|+++..++.+.. . ++..|++++-++....
T Consensus 58 ~lr~~ia~~~~~~~---------~~i~~~~G~~~~l~~~~~~l~----~---------------~gd~v~~~~p~y~~~~ 109 (346)
T TIGR01141 58 ELKQALADYYGVDP---------EQILLGNGSDEIIELLIRAFL----E---------------PGDAVLVPPPTYSMYE 109 (346)
T ss_pred HHHHHHHHHhCcCh---------HHEEEcCCHHHHHHHHHHHhc----C---------------CCCEEEEcCCCHHHHH
Confidence 46677788888654 257899999998755544321 1 1124666666666666
Q ss_pred HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc--CCEEEEeccc
Q psy13453 646 KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY--NIWLHVDAAY 723 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~--glwLHVDaA~ 723 (764)
..+...|++++.+|++++|.+|+++|++.+.+. +-+|+.+..++.+|.+-|++++.++|+.+ |+++++|.+|
T Consensus 110 ~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y 183 (346)
T TIGR01141 110 ISAKIHGAEVVKVPLDEDGQLDLEDILVAIDDK------PKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAY 183 (346)
T ss_pred HHHHHcCCeEEEeccCCCCCCCHHHHHHhcCCC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECch
Confidence 678889999999999988999999999976432 34777788899999999999999999887 9999999999
Q ss_pred cccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 724 AGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 724 Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+.... -+.........+ .+-+..+++|+++.| ..+|.+
T Consensus 184 ~~~~~-~~~~~~~~~~~~-~~i~~~S~sK~~g~~G~r~G~~ 222 (346)
T TIGR01141 184 GEFSG-EPSTLPLLAEYP-NLIVLRTLSKAFGLAGLRIGYA 222 (346)
T ss_pred hhhcC-CccHHHHHhhCC-CEEEEehhhHhhhchhhhceee
Confidence 85321 111111222221 134467899999654 336665
No 151
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=98.93 E-value=1.4e-08 Score=115.14 Aligned_cols=150 Identities=15% Similarity=0.149 Sum_probs=108.1
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|...++| +.+++++|.+ ..+++++|++|+..++.+... + .-.|+
T Consensus 55 ~~p~~~~le----~~lA~l~g~~-----------~~v~~~sG~~Ai~~al~~l~~---~----------------Gd~Vl 100 (418)
T TIGR01326 55 MNPTTDVLE----QRIAALEGGV-----------AALAVASGQAAITYAILNLAQ---A----------------GDNIV 100 (418)
T ss_pred CChhHHHHH----HHHHHHhCCC-----------eEEEEccHHHHHHHHHHHHhC---C----------------CCEEE
Confidence 345554444 5678888763 368999999998888765421 1 11355
Q ss_pred ecCCcchh----HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSS----VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~S----v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...|.. +.+.+...|+.++.++.+ |+++|+++|++. +-+|+....++.+|.+-|+++|+++|+
T Consensus 101 ~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~l~~~------t~~V~le~p~NPtg~v~dl~~I~~la~ 169 (418)
T TIGR01326 101 SSSYLYGGTYNLFKHTLKRLGIEVRFVDPD-----DPEEFEKAIDEN------TKAVFAETIGNPAINVPDIEAIAEVAH 169 (418)
T ss_pred EECCCcHHHHHHHHHHHHHcCcEEEEECCC-----CHHHHHHhcCcC------CeEEEEECCCCCCCeecCHHHHHHHHH
Confidence 66665532 345567789988888753 789999988653 336666777888999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
++|++++||.+|+.+....+ .- ..+|.++.++||+++.+
T Consensus 170 ~~~i~livD~t~~~~~~~~~----l~---~g~Divv~S~sK~l~g~ 208 (418)
T TIGR01326 170 AHGVPLIVDNTFATPYLCRP----ID---HGADIVVHSATKYIGGH 208 (418)
T ss_pred HcCCEEEEECCCchhhcCCc----hh---cCCeEEEECccccccCC
Confidence 99999999999986532222 11 13699999999999864
No 152
>PRK05968 hypothetical protein; Provisional
Probab=98.93 E-value=1.9e-08 Score=112.99 Aligned_cols=154 Identities=16% Similarity=0.150 Sum_probs=109.2
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEe
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT 636 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~ 636 (764)
.|...++|+ .+++++|.+. .+++++|+.|+..++.+. .. +.-.|++
T Consensus 62 ~p~~~~le~----~lA~l~g~~~-----------av~~~sG~~Ai~~al~al----~~---------------~Gd~Vl~ 107 (389)
T PRK05968 62 NPTVRAFEE----MLAKLEGAED-----------ARGFASGMAAISSTVLSF----VE---------------PGDRIVA 107 (389)
T ss_pred ChhHHHHHH----HHHHHhCCCc-----------EEEECCHHHHHHHHHHHH----hC---------------CCCEEEE
Confidence 455555664 6778888753 467788888887776532 11 1124666
Q ss_pred cCCcchhH----HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh
Q psy13453 637 SDQSNSSV----EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE 712 (764)
Q Consensus 637 S~~aH~Sv----~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~ 712 (764)
+...|.+. .+.+...|++++.++.+ |++++++++ +. +-+|++...|+.++.+.|+++|+++|++
T Consensus 108 ~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~~i-~~------tklV~ie~pt~~~~~~~dl~~i~~la~~ 175 (389)
T PRK05968 108 VRHVYPDAFRLFETILKRMGVEVDYVDGR-----DEEAVAKAL-PG------AKLLYLESPTSWVFELQDVAALAALAKR 175 (389)
T ss_pred eCCCchHHHHHHHHHHHHcCceEEEeCCC-----CHHHHHHhc-cc------CCEEEEECCCCCCCcHHHHHHHHHHHHH
Confidence 77777653 35566789998888654 789998887 22 2366667788888999999999999999
Q ss_pred cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC--ceee
Q psy13453 713 YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD--CSAM 763 (764)
Q Consensus 713 ~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~--~g~l 763 (764)
||++++||++|+.+...-| ...| +|.+..++||+++.|-+ .|++
T Consensus 176 ~gi~vivD~a~a~~~~~~p----~~~g---~Divv~S~tK~l~g~~~~~gG~i 221 (389)
T PRK05968 176 HGVVTMIDNSWASPVFQRP----ITLG---VDLVIHSASKYLGGHSDTVAGVV 221 (389)
T ss_pred cCCEEEEECCCcchhccCc----hhcC---CcEEEeeccccccCCCCeEEEEE
Confidence 9999999999977543222 1123 59999999999998754 4554
No 153
>PRK05957 aspartate aminotransferase; Provisional
Probab=98.93 E-value=3.5e-08 Score=110.55 Aligned_cols=157 Identities=15% Similarity=0.122 Sum_probs=113.1
Q ss_pred HHHHHHhhc-ccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhcc
Q psy13453 540 GDMLSGAFG-LIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQS 618 (764)
Q Consensus 540 ad~l~~~lN-~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~ 618 (764)
.+.+...++ .....|........+-+.+.+++++.+|.+.+ .....++|+|++++...++.+. ..
T Consensus 46 ~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~------~~~~i~~t~G~~~~l~~~~~~~----~~---- 111 (389)
T PRK05957 46 IEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELN------NEQAIVVTAGSNMAFMNAILAI----TD---- 111 (389)
T ss_pred HHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC------CCCeEEEeCChHHHHHHHHHHh----cC----
Confidence 344444432 22234544555567778888999999887421 0135789999999876665432 11
Q ss_pred CCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcc
Q psy13453 619 KNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTC 698 (764)
Q Consensus 619 ~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~G 698 (764)
++..|+++.-.+.....+++..|+.++.+|.++++.+|+++|++.|++. +-+|+.+..++.+|
T Consensus 112 -----------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~klv~~~~p~NPtG 174 (389)
T PRK05957 112 -----------PGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAITPK------TRAIVTISPNNPTG 174 (389)
T ss_pred -----------CCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcCcC------ceEEEEeCCCCCCC
Confidence 1124666766666666667788999999999888899999999998643 33667777899999
Q ss_pred cccc---HHHHHHHHHhcCCEEEEeccccccc
Q psy13453 699 AFDN---LEELGPICQEYNIWLHVDAAYAGSA 727 (764)
Q Consensus 699 aiDp---l~eIa~i~~~~glwLHVDaA~Gg~~ 727 (764)
.+-+ +++|+++|++||+++.+|.+|+...
T Consensus 175 ~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~ 206 (389)
T PRK05957 175 VVYPEALLRAVNQICAEHGIYHISDEAYEYFT 206 (389)
T ss_pred cCcCHHHHHHHHHHHHHcCcEEEEeccchhcc
Confidence 9876 8889999999999999999998653
No 154
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.93 E-value=1.4e-08 Score=115.51 Aligned_cols=151 Identities=17% Similarity=0.102 Sum_probs=108.8
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|....+|+ .++++.|.+. .+++++|+.|+..++.+.. . ++-.|+
T Consensus 67 ~~p~~~~Le~----~lA~l~g~~~-----------av~~sSG~aAi~~al~all----~---------------~Gd~Vv 112 (436)
T PRK07812 67 MNPTQDVVEQ----RIAALEGGVA-----------ALLLASGQAAETFAILNLA----G---------------AGDHIV 112 (436)
T ss_pred CCchHHHHHH----HHHHHhCCCe-----------EEEEccHHHHHHHHHHHHh----C---------------CCCEEE
Confidence 3466666665 6677777643 6899999999877775331 1 112466
Q ss_pred ecCCcchhHHHH----HHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~Sv~kA----a~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...|...... +...|+.++.++ |. -|+++++++|++. +-+|+....++.+|.+-|+++|+++|+
T Consensus 113 ~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d~---~d~e~l~~ai~~~------tklV~ie~~sNp~G~v~Dl~~I~~la~ 182 (436)
T PRK07812 113 SSPRLYGGTYNLFHYTLPKLGIEVSFVE-DP---DDLDAWRAAVRPN------TKAFFAETISNPQIDVLDIPGVAEVAH 182 (436)
T ss_pred EeCCcchHHHHHHHHHhhcCeEEEEEEC-CC---CCHHHHHHhCCCC------CeEEEEECCCCCCCeecCHHHHHHHHH
Confidence 777777665433 334677777774 22 2899999888643 348888888999999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
++|++++||++++.+....+ .-. .||-+..++|||++.+
T Consensus 183 ~~gi~liVD~t~a~~~~~~p----l~~---GaDivv~S~tK~lgg~ 221 (436)
T PRK07812 183 EAGVPLIVDNTIATPYLIRP----LEH---GADIVVHSATKYLGGH 221 (436)
T ss_pred HcCCEEEEECCCcccccCCc----hhc---CCCEEEEecccccCCC
Confidence 99999999999987654332 111 4699999999999855
No 155
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=98.93 E-value=6.9e-08 Score=107.63 Aligned_cols=225 Identities=10% Similarity=0.002 Sum_probs=143.6
Q ss_pred ccccCCcceeeeeHHHHH---hhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchh
Q psy13453 11 AYPSETLSLLIYESFKAT---HSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNA 87 (764)
Q Consensus 11 ~~~~~~~~~~~YSv~KAa---~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ 87 (764)
+..++. .|.|+..+. +..|+.. +.||+++++.+|+++|+++|++. +-+++.+.++.++|.+.|+++
T Consensus 93 vi~~~~---e~ps~~~~~~~~~~~G~~v---~~v~~~~~g~~d~~~l~~~i~~~-----t~lv~~~~~~n~tG~~~~~~~ 161 (382)
T TIGR03403 93 IITTEV---EHPAVRATCAFLESLGVEV---TYLPINEQGTITAEQVREAITEK-----TALVSVMWANNETGMIFPIKE 161 (382)
T ss_pred EEEcCC---ccHHHHHHHHHHHHCCCEE---EEEecCCCCCCCHHHHHHhcccC-----CeEEEEEcccCCCccccCHHH
Confidence 444444 465555554 4567655 99999999999999999999753 234557788999999999999
Q ss_pred hhc-----CCCceeccccc--------------------ccc-----ceeeeecCCCccccccccccccCCcccC----C
Q psy13453 88 PVS-----NGPLKVGGVLR--------------------RVY-----SSCLVPRGQKSLRTTVLFHFLFQHWQIP----L 133 (764)
Q Consensus 88 ia~-----~~wlHVDa~l~--------------------~~y-----~s~ll~rd~~~l~~~~s~~~d~~d~tle----~ 133 (764)
|++ ++++|||++.. +++ ++++++|+...+...+ .+...+. +
T Consensus 162 I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~g~l~vr~~~~~~p~~-----~g~~~~~~~~~g 236 (382)
T TIGR03403 162 IGEICKERGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHKFHGPKGVGGLYIRKGVELTPLF-----HGGEHMGGRRSG 236 (382)
T ss_pred HHHHHHHcCCEEEEechhhcCCCccCccccCCCEEEEcchhhCCCCceEEEEECCCCCCCCcc-----cCCCCCCCcccC
Confidence 886 89999999521 111 1234444432211100 0000011 1
Q ss_pred CCcccHH-HHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC---ceeEEEEeeccccccccccccCcc
Q psy13453 134 GRRFRAL-KLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS---MGLVCFRLKVRFWDKLDNLFGTIS 209 (764)
Q Consensus 134 SRr~~AL-klWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~---l~iV~Fry~P~~~~~~~~~~~~~~ 209 (764)
+-..-++ .+-.+++.+ .+++.+..++.-++++++.+.|+++++++++.+++ -++++|...
T Consensus 237 t~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 300 (382)
T TIGR03403 237 TLNVPYIVAMGEAMRLA-NEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIK--------------- 300 (382)
T ss_pred CcChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeC---------------
Confidence 2222223 445555543 45677778889999999999999999999987642 346677542
Q ss_pred CCccHHHHHHHHHHHhcCcEEEEec-----e---------e--C---CeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 210 FGDNDLNKAVYDRIIARKVIYIVKG-----S---------F--Q---DRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 210 ~~~d~~n~~L~~~L~~~G~~~vs~t-----~---------l--~---g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
+.+ ...+.+.|.++|...-+.. . + + ....+|++ .++.+|++||+.+++.|+++.+++
T Consensus 301 -~~~--~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s-~~~~~t~~did~~~~~l~~~~~~~ 376 (382)
T TIGR03403 301 -GVE--GEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLS-LSRFTTEEEIDYTIEVFKKAVQRL 376 (382)
T ss_pred -CCC--HHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEE-CCCCCCHHHHHHHHHHHHHHHHHH
Confidence 111 2356666777776544321 0 0 0 12579995 566889999999999999987765
Q ss_pred H
Q psy13453 271 L 271 (764)
Q Consensus 271 ~ 271 (764)
.
T Consensus 377 ~ 377 (382)
T TIGR03403 377 R 377 (382)
T ss_pred H
Confidence 3
No 156
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=98.93 E-value=6.7e-08 Score=106.39 Aligned_cols=228 Identities=10% Similarity=0.005 Sum_probs=154.7
Q ss_pred cccccccCCcceeeeeHHHHHhhc---CCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEE-EeeCCccccccc
Q psy13453 8 PKLAYPSETLSLLIYESFKATHSL---SGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCS-GYCGRTLHQDIQ 83 (764)
Q Consensus 8 ~~~~~~~~~~~~~~YSv~KAa~~L---Gl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~V-atAGTT~~G~iD 83 (764)
++-+++|.. =|=||.-.+++| |++. -.+|||++|++|++.|+++|..+ +++| -.+.+-++|+|-
T Consensus 91 ~~HIIts~i---EH~aVl~~~~~Le~~g~~V---tyl~V~~~G~v~~e~L~~al~~~------T~LVSim~aNnE~G~IQ 158 (386)
T COG1104 91 GKHIITSAI---EHPAVLNTCRYLERQGFEV---TYLPVDSNGLVDLEQLEEALRPD------TILVSIMHANNETGTIQ 158 (386)
T ss_pred CCeEEEccc---ccHHHHHHHHHHHhcCCeE---EEeCCCCCCeEcHHHHHHhcCCC------ceEEEEEecccCeeecc
Confidence 344777777 599999999999 8887 99999999999999999999975 4565 778999999999
Q ss_pred Cchhhhc-----CCCceecccc--------------------cccc----c-eeeeecCCCccccccccccccCCcccCC
Q psy13453 84 SLNAPVS-----NGPLKVGGVL--------------------RRVY----S-SCLVPRGQKSLRTTVLFHFLFQHWQIPL 133 (764)
Q Consensus 84 pi~~ia~-----~~wlHVDa~l--------------------~~~y----~-s~ll~rd~~~l~~~~s~~~d~~d~tle~ 133 (764)
||++|++ +++|||||.- .|++ + +.|+.|..-.+.-. ...=+=|.
T Consensus 159 pI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK~~GpkGiGaLyv~~~~~~~p~------i~GGgQE~ 232 (386)
T COG1104 159 PIAEIGEICKERGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHKFGGPKGIGALYVRPGVRLEPL------IHGGGQER 232 (386)
T ss_pred cHHHHHHHHHHcCCeEEEehhhhcCceeccccccCcceEEeehhhccCCCceEEEEECCCCccCce------eccCcCCC
Confidence 9999987 8999999931 2332 1 34444332222211 00011233
Q ss_pred CCcccHH-----HHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEeCCCC---ceeEEEEeecccccccccc
Q psy13453 134 GRRFRAL-----KLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQD-DRFELVCPPS---MGLVCFRLKVRFWDKLDNL 204 (764)
Q Consensus 134 SRr~~AL-----klWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~-p~~ell~~P~---l~iV~Fry~P~~~~~~~~~ 204 (764)
+||..-. .-...-..+..+.+.+...+...+.++|.+.|++. |++.+.+.++ -++++|.+.. .+
T Consensus 233 g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~g--v~----- 305 (386)
T COG1104 233 GLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPG--VE----- 305 (386)
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCC--Cc-----
Confidence 4444433 22334445667888888999999999999999975 9999987742 3455555531 11
Q ss_pred ccCccCCccHHHHHHHHHHHhcCcEEEEec-----ee--------------CCeeEEEEeccCCCCCHHHHHHHHHHHHH
Q psy13453 205 FGTISFGDNDLNKAVYDRIIARKVIYIVKG-----SF--------------QDRLFMRFAICSSQTEESDVQLGWNEIRT 265 (764)
Q Consensus 205 ~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t-----~l--------------~g~~~LRi~v~np~Tt~e~i~~~l~~l~~ 265 (764)
-..+.-.|...|.+..+.. .+ .-...||++ ....|++++++.+++.+++
T Consensus 306 -----------gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S-~g~~tt~eei~~~~~~l~~ 373 (386)
T COG1104 306 -----------GESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFS-LGRFTTEEEIDAAAEALKE 373 (386)
T ss_pred -----------HHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEE-cCCCCCHHHHHHHHHHHHH
Confidence 1234444444444322111 00 114689996 4567789999999999999
Q ss_pred HHHHHHc
Q psy13453 266 ATEEVLR 272 (764)
Q Consensus 266 ~~~~i~~ 272 (764)
+.+.+.+
T Consensus 374 ~i~~lr~ 380 (386)
T COG1104 374 IIKRLRE 380 (386)
T ss_pred HHHHHhh
Confidence 9988754
No 157
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=98.93 E-value=7e-08 Score=106.83 Aligned_cols=228 Identities=11% Similarity=0.061 Sum_probs=140.3
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCC--CcccHHHHHHHHHHHhhC-CCCc-EEEEeeCCcccccccCchhhhc-----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDS--EWLAYLTLRTIYESFRKS-FLCP-MCSGYCGRTLHQDIQSLNAPVS----- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~--~rmD~~aLe~~I~~~~~~-G~~p-~~VatAGTT~~G~iDpi~~ia~----- 90 (764)
.|||..++++..|+.. +.||++.+ +.+|+++|++++++..+. +..+ +++-+.+++++|.++|+.++++
T Consensus 92 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~ 168 (361)
T cd06452 92 AHYTSYVAAERAGLNV---REVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEY 168 (361)
T ss_pred cchHHHHHHHhcCCEE---EEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHc
Confidence 7999999999999877 99999865 499999999999764322 1123 4456788999999999999886
Q ss_pred CCCceecccccc---cc-----------------------ceeeeecCCCccccc--cccccccCCcccCC-C-CcccHH
Q psy13453 91 NGPLKVGGVLRR---VY-----------------------SSCLVPRGQKSLRTT--VLFHFLFQHWQIPL-G-RRFRAL 140 (764)
Q Consensus 91 ~~wlHVDa~l~~---~y-----------------------~s~ll~rd~~~l~~~--~s~~~d~~d~tle~-S-Rr~~AL 140 (764)
+++++||++... ++ ++|+..+. +..... ....++....+..+ + +...+.
T Consensus 169 ~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (361)
T cd06452 169 GVPLLLNGAYTVGRMPVSGKELGADFIVGSGHKSMAASAPIGVLATTE-EWADIVFRTSQMFKIKEVELLGCTLRGAPLV 247 (361)
T ss_pred CCeEEEECCcccCCcCCCHHHcCCCEEEecCCccccCCCCeEEEEECH-HHHHHHhccccccccceeeeeccccCchHHH
Confidence 789999996421 11 02222221 100000 00000111111111 1 223355
Q ss_pred HHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeC--CCCceeEEEEeeccccccccccccCccCCccHHHHH
Q psy13453 141 KLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVC--PPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKA 218 (764)
Q Consensus 141 klWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~--~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~ 218 (764)
.+++++.++ ..+.+.+++.++.++++++.|+++|+|+++. +...+++.|+.. ...... .....-..+
T Consensus 248 ~~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~--~~~~~~-------~~~~~~~~~ 316 (361)
T cd06452 248 TLMASFPHV--KERVKRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETP--SFDEIA-------KKHKRRGYF 316 (361)
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcC--Ccchhh-------hhccccchh
Confidence 666666654 2345667777888999999999999999984 345667777642 110000 000000136
Q ss_pred HHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 219 VYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 219 L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
+.+.|.++|... ... ....++|+++ +-.++++++.+++.|+++.
T Consensus 317 ~~~~L~~~gI~~-~~~--~~~~~~ri~~--~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 317 LYSELKKRGIHG-IKP--GLTRYFKLST--YGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred HHHHHHHcCceE-EcC--CCceEEEEEe--cCCCHHHHHHHHHHHHHHh
Confidence 889998889752 111 1234788765 3357899999999998653
No 158
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=98.92 E-value=1.6e-08 Score=113.06 Aligned_cols=150 Identities=14% Similarity=0.107 Sum_probs=108.4
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEe
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT 636 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~ 636 (764)
.|...++| +.+++++|.+. .+++++|++++..++.+.. .. ...|++
T Consensus 53 ~p~~~~le----~~la~l~g~~~-----------~~~~~sG~~Ai~~al~al~----~~---------------Gd~Vl~ 98 (380)
T TIGR01325 53 NPTVAAFE----ERIAALEGAER-----------AVATATGMSAIQAALMTLL----QA---------------GDHVVA 98 (380)
T ss_pred CchHHHHH----HHHHHHhCCCc-----------EEEECCHHHHHHHHHHHHh----CC---------------CCEEEE
Confidence 45555555 46677887643 5789999999988875431 10 113555
Q ss_pred cCCcchh----HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh
Q psy13453 637 SDQSNSS----VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE 712 (764)
Q Consensus 637 S~~aH~S----v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~ 712 (764)
+...|.+ +.+.+...|++++.++.+ |++++++++++. +-+|+....++.+|.+-|+++|+++|++
T Consensus 99 ~~~~~~~t~~~~~~~~~~~g~~v~~v~~~-----d~~~l~~~i~~~------tklV~le~p~np~g~~~dl~~I~~la~~ 167 (380)
T TIGR01325 99 SRSLFGSTVGFISEILPRFGIEVSFVDPT-----DLNAWEAAVKPN------TKLVFVETPSNPLGELVDIAALAELAHA 167 (380)
T ss_pred ecCCcchHHHHHHHHHHHhCCEEEEECCC-----CHHHHHHhcCCC------ceEEEEECCCCCCCeeeCHHHHHHHHHH
Confidence 6666643 344566689998888765 688888887543 4478888888999999999999999999
Q ss_pred cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc
Q psy13453 713 YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 713 ~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~ 758 (764)
+|++++||.+|+.+....| .. . .+|.++.++||+++.+-
T Consensus 168 ~gi~livD~a~~~~~~~~p-l~---~---g~Divv~S~sK~l~g~g 206 (380)
T TIGR01325 168 IGALLVVDNVFATPVLQQP-LK---L---GADVVVYSATKHIDGQG 206 (380)
T ss_pred cCCEEEEECCCcccccCCc-hh---h---CCCEEEeeccceecCCC
Confidence 9999999999986543222 11 1 36999999999998763
No 159
>PRK07337 aminotransferase; Validated
Probab=98.92 E-value=3.4e-08 Score=110.43 Aligned_cols=191 Identities=15% Similarity=0.067 Sum_probs=130.1
Q ss_pred HHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhc
Q psy13453 538 IVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQ 617 (764)
Q Consensus 538 ~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~ 617 (764)
.+.+.+...+......|........+.+.+.+|+.+..|.+-+ ....++|+|++++...++.+. ..
T Consensus 47 ~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-------~~~i~~t~G~~~al~~~~~~l----~~--- 112 (388)
T PRK07337 47 PVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVA-------PERIVVTAGASAALLLACLAL----VE--- 112 (388)
T ss_pred HHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-------hHhEEEecCcHHHHHHHHHHh----cC---
Confidence 3445555555433444555556778888899999888876421 135789999999876655432 11
Q ss_pred cCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccC
Q psy13453 618 SKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTT 695 (764)
Q Consensus 618 ~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT 695 (764)
+...|++++-+|.+...++...|.+++.+|.+. ++.+|+++|++.+.+. +.+|+.+..++
T Consensus 113 ------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~N 174 (388)
T PRK07337 113 ------------RGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGER------TRGVLLASPSN 174 (388)
T ss_pred ------------CCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCcc------ceEEEEECCCC
Confidence 122577888889888888888999999999974 4689999999988643 23666678899
Q ss_pred Cccccc---cHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEE-EcCCccCCCCc-Cceee
Q psy13453 696 GTCAFD---NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFD-FNTHKWLLVNF-DCSAM 763 (764)
Q Consensus 696 ~~GaiD---pl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit-~d~HK~l~~P~-~~g~l 763 (764)
.+|.+- ++++|+++|+++++|+++|.+|..... -+...... .+ ..+.|+ .+++|.++.|- -+|.+
T Consensus 175 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~-~~-~~~vi~~~S~SK~~~~~G~RiG~~ 244 (388)
T PRK07337 175 PTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSY-DAAPVSAL-SL-GDDVITINSFSKYFNMTGWRLGWL 244 (388)
T ss_pred CCCcCcCHHHHHHHHHHHHHCCCEEEEecccccccc-CCCCcChh-hc-cCCEEEEEechhhcCCchhheeee
Confidence 999975 578888999999999999999986432 11111111 11 124554 48999886542 24543
No 160
>PRK08960 hypothetical protein; Provisional
Probab=98.92 E-value=2.9e-08 Score=111.05 Aligned_cols=190 Identities=11% Similarity=0.055 Sum_probs=127.6
Q ss_pred HHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhcc
Q psy13453 539 VGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQS 618 (764)
Q Consensus 539 lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~ 618 (764)
+.+.+...+......|...+....+.+.+.+|+.+..|++-+ ....++|+|+++++..++.+. ..
T Consensus 50 v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-------~~~i~it~G~~~al~~~~~~~----~~---- 114 (387)
T PRK08960 50 IVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVD-------PERILVTPGGSGALLLASSLL----VD---- 114 (387)
T ss_pred HHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCC-------hhhEEEccCcHHHHHHHHHHh----cC----
Confidence 334444444333334555556677888888888887776432 246789999999976665432 11
Q ss_pred CCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCC--CcccHHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 619 KNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDN--GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 619 ~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~--g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
++..|++++-+|.+....+...|.+++.||++++ +.+|+++|++.+++. +.+|+.+..++.
T Consensus 115 -----------~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~------~~~i~i~~p~NP 177 (387)
T PRK08960 115 -----------PGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNAD------TVGALVASPANP 177 (387)
T ss_pred -----------CCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCcc------ceEEEEECCCCC
Confidence 1235778899999999999999999999999754 579999999987653 236667778999
Q ss_pred cccccc---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCccc-EEEEcCCccCCCC-cCceee
Q psy13453 697 TCAFDN---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVD-SFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 697 ~GaiDp---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aD-Sit~d~HK~l~~P-~~~g~l 763 (764)
+|.+-+ +.+|+++|++||+|+.+|.+|..... .+.....+ .+. .+ -+.-+++|.++.| .-+|.+
T Consensus 178 tG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~-~~~~~~~~-~~~-~~vi~~~S~SK~~g~~GlRiG~~ 246 (387)
T PRK08960 178 TGTLLSRDELAALSQALRARGGHLVVDEIYHGLTY-GVDAASVL-EVD-DDAFVLNSFSKYFGMTGWRLGWL 246 (387)
T ss_pred CCcCcCHHHHHHHHHHHHHcCCEEEEEcccccccc-CCCCCChh-hcc-CCEEEEeecccccCCcccEEEEE
Confidence 999865 56677789999999999999976432 11111111 221 13 3456899988643 225543
No 161
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=98.92 E-value=4.1e-08 Score=110.91 Aligned_cols=210 Identities=15% Similarity=0.092 Sum_probs=133.7
Q ss_pred CCCccccccCCCCC------hHHHHHHHHHHhhccc-CccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEE
Q psy13453 521 QSPQFNAYFPTGSS------YPSIVGDMLSGAFGLI-GFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGII 593 (764)
Q Consensus 521 ~~P~~~~~~~~~~~------~~~~lad~l~~~lN~n-~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~Gvf 593 (764)
.++..+.+..+.++ ++..+.+.+...++.. ...|........+-+.+.+|+.+.++.+++.. ..-.....++
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~-~~~~~~~i~i 109 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLK-STIKKDNVVL 109 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhcccccccc-CCCChhhEEE
Confidence 34455555544432 3455566666655542 23444444567788888888887654211000 0001246789
Q ss_pred eCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHH
Q psy13453 594 QSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDAL 671 (764)
Q Consensus 594 TsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~L 671 (764)
|+|+++++..++.+... +...|+++.-++......+...|++++.+|+++ ++.+|+++|
T Consensus 110 t~G~~~al~~~~~~~~~-------------------~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l 170 (412)
T PTZ00433 110 CSGVSHAILMALTALCD-------------------EGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEI 170 (412)
T ss_pred eCChHHHHHHHHHHhcC-------------------CCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHH
Confidence 99999998777664311 122467777788888899999999999999863 578999999
Q ss_pred HHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCC-cccE-E
Q psy13453 672 LTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE-YVDS-F 746 (764)
Q Consensus 672 e~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie-~aDS-i 746 (764)
++.+++. +-+|+.+..++.+|.+ +++++|+++|++||+|+++|.+|.....-...+.. +..+. ..+. +
T Consensus 171 ~~~~~~~------~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~~i~ 243 (412)
T PTZ00433 171 RRLVDDR------TKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTS-VADFDTTVPRVI 243 (412)
T ss_pred HHHhccC------ceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccc-hhhccCCCceEE
Confidence 9887653 3366777888999975 56888899999999999999999854321111111 11111 1123 3
Q ss_pred EEcCCccCCCC
Q psy13453 747 DFNTHKWLLVN 757 (764)
Q Consensus 747 t~d~HK~l~~P 757 (764)
.-++-|.++.|
T Consensus 244 ~~SfSK~~~~p 254 (412)
T PTZ00433 244 LGGTAKNLVVP 254 (412)
T ss_pred EccchhhcCCC
Confidence 45889987544
No 162
>PLN02656 tyrosine transaminase
Probab=98.91 E-value=4.6e-08 Score=110.41 Aligned_cols=143 Identities=13% Similarity=0.105 Sum_probs=108.6
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCce
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKL 632 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~ 632 (764)
.|........+.+.+.+++.+..|++-+ ....++|+|+++++..++.+.. . +..
T Consensus 68 ~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-------~~~i~~t~G~~~al~~~~~~l~----~---------------~gd 121 (409)
T PLN02656 68 GYAPTVGLPQARRAIAEYLSRDLPYKLS-------LDDVFITSGCTQAIDVALSMLA----R---------------PGA 121 (409)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCC-------cccEEEeCChHHHHHHHHHHHh----C---------------CCC
Confidence 3444455667888888888877665422 2467899999999777665431 1 112
Q ss_pred EEEecCCcchhHHHHHHhCCCceEEEecC--CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHHH
Q psy13453 633 VAYTSDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEELG 707 (764)
Q Consensus 633 vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d--~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eIa 707 (764)
.|++++-+|.....++...|++++.+|++ +.+.+|+++|++++++. +.+|+.+..++.+|.+ +++++|+
T Consensus 122 ~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPtG~~~s~~~~~~i~ 195 (409)
T PLN02656 122 NILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQN------TVALVIINPGNPCGNVYSYQHLKKIA 195 (409)
T ss_pred eEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccC------ceEEEEECCCCCCCCCCCHHHHHHHH
Confidence 47777888888888888899999999985 34689999999887543 3467777789999999 7899999
Q ss_pred HHHHhcCCEEEEeccccccc
Q psy13453 708 PICQEYNIWLHVDAAYAGSA 727 (764)
Q Consensus 708 ~i~~~~glwLHVDaA~Gg~~ 727 (764)
++|++||+|+++|.+|+...
T Consensus 196 ~~a~~~~~~ii~De~y~~~~ 215 (409)
T PLN02656 196 ETAEKLKILVIADEVYGHLA 215 (409)
T ss_pred HHHHHcCCEEEEehhhhhcc
Confidence 99999999999999998643
No 163
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=98.91 E-value=5.7e-08 Score=109.17 Aligned_cols=160 Identities=13% Similarity=0.030 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
...++.+.+++++|.+. .+++++|++||..++.+++... ++.+|+++...|.
T Consensus 91 ~~~~Le~~la~~~g~~~-----------~l~~~sG~~an~~ai~~l~~~~-----------------~~~~v~~~~~~h~ 142 (402)
T TIGR01821 91 PHVELEAELADLHGKES-----------ALVFTSGYVANDATLATLAKII-----------------PGCVIFSDELNHA 142 (402)
T ss_pred HHHHHHHHHHHHhCCCe-----------EEEECchHHHHHHHHHHhhCCC-----------------CCCEEEEcchHhH
Confidence 33455567788887532 5777888999999887664320 1235777777899
Q ss_pred hHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEecc
Q psy13453 643 SVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAA 722 (764)
Q Consensus 643 Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA 722 (764)
++..++...|..+..++. .|+++|++.++... ...+.+|+....++.+|.+-|+++|+++|++||+||+||.|
T Consensus 143 s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~--~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea 215 (402)
T TIGR01821 143 SMIEGIRHSGAEKFIFRH-----NDVAHLEKLLQSVD--PNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEV 215 (402)
T ss_pred HHHHHHHHcCCeEEEECC-----CCHHHHHHHHHhcc--CCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCc
Confidence 999998888887665543 37888998886431 12356777888888999999999999999999999999999
Q ss_pred ccccccccchhhh--hhcCC-CcccEEEEcCCccCCCCc
Q psy13453 723 YAGSALLLPEYAH--LKRGL-EYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 723 ~Gg~~l~~~~~r~--~l~gi-e~aDSit~d~HK~l~~P~ 758 (764)
|+.+.+ .+.... ...++ +..|-+..++.|.++.+-
T Consensus 216 ~~~G~~-g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G 253 (402)
T TIGR01821 216 HAVGLY-GPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG 253 (402)
T ss_pred cccccc-CCCCCccchhccCCCCCeEEEEechhhhccCC
Confidence 984432 121111 11222 345877779999988644
No 164
>PRK06767 methionine gamma-lyase; Provisional
Probab=98.90 E-value=2.2e-08 Score=112.24 Aligned_cols=156 Identities=10% Similarity=0.024 Sum_probs=107.9
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|...++|+ .+++++|.+ ..+++++|+.++..++.+.. . +.-.|+
T Consensus 59 ~~pt~~~Le~----~lA~l~G~~-----------~al~~~sG~~Ai~~~l~al~----~---------------~Gd~Vv 104 (386)
T PRK06767 59 GNPTVKLFEE----RMAVLEGGE-----------EALAFGSGMAAISATLIGFL----K---------------AGDHII 104 (386)
T ss_pred CCcchHHHHH----HHHHHhCCC-----------cEEEECCHHHHHHHHHHHHh----C---------------CCCEEE
Confidence 4566666665 667777753 35788888887666554321 1 112467
Q ss_pred ecCCcchhHHHHH----HhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~Sv~kAa----~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...|.+..... ...|+.+..++. .|+++++++|++. +-+|+....++.+|.+-|+++|+++|+
T Consensus 105 ~~~~~y~~~~~~~~~~~~~~gi~~~~~~~-----~d~~~l~~~i~~~------tklV~lesp~NptG~v~dl~~I~~la~ 173 (386)
T PRK06767 105 CSNGLYGCTYGFLEVLEEKFMITHSFCDM-----ETEADIENKIRPN------TKLIFVETPINPTMKLIDLKQVIRVAK 173 (386)
T ss_pred EcCCcHHHHHHHHHHHHhhcCeEEEEeCC-----CCHHHHHHhhCcC------ceEEEEeCCCCCCceecCHHHHHHHHH
Confidence 7777776554443 334555555543 3788999888653 347888888999999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC--ceee
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD--CSAM 763 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~--~g~l 763 (764)
++|++++||+||+......| ... .+|.++.+++|+++.+-+ .|++
T Consensus 174 ~~g~~vivD~a~a~~~~~~p----l~~---g~Div~~S~sK~l~g~g~~~gG~v 220 (386)
T PRK06767 174 RNGLLVIVDNTFCSPYLQRP----LEL---GCDAVVHSATKYIGGHGDVVAGVT 220 (386)
T ss_pred HcCCEEEEECCCcccccCCc----hhc---CCcEEEecCcceecCCCCceeEEE
Confidence 99999999999975433222 112 469999999999987754 3543
No 165
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=98.90 E-value=9.9e-08 Score=106.94 Aligned_cols=230 Identities=11% Similarity=0.018 Sum_probs=141.6
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecC--CCCCcccHHHHHHHHHHHhh-CCCCcEE-EEeeCCcccccccCchhhhc-----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGL--PDSEWLAYLTLRTIYESFRK-SFLCPMC-SGYCGRTLHQDIQSLNAPVS----- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpv--d~~~rmD~~aLe~~I~~~~~-~G~~p~~-VatAGTT~~G~iDpi~~ia~----- 90 (764)
.|||+..++...|+.. +.||+ ++++.+|+++|+++|++... .+..+-+ +-+.+++++|.+.|++++++
T Consensus 111 ~h~s~~~~~~~~G~~~---~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~ 187 (387)
T PRK09331 111 AHYTSYVAAERAGLNV---REVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEY 187 (387)
T ss_pred chHHHHHHHHHcCCEE---EEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHc
Confidence 8999999999999877 99999 77899999999999986422 1122334 56778889999999999886
Q ss_pred CCCceeccccccc---c------c-----------------eeeeecCCCccccccccc--cccCCcc-cCC-CCcccHH
Q psy13453 91 NGPLKVGGVLRRV---Y------S-----------------SCLVPRGQKSLRTTVLFH--FLFQHWQ-IPL-GRRFRAL 140 (764)
Q Consensus 91 ~~wlHVDa~l~~~---y------~-----------------s~ll~rd~~~l~~~~s~~--~d~~d~t-le~-SRr~~AL 140 (764)
++++|||++.... + . +++..++ +......... ++..... +.+ ++...+.
T Consensus 188 g~~livD~a~~~g~~~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (387)
T PRK09331 188 GIPFLLNGAYTVGRMPVDGKKLGADFIVGSGHKSMAASAPSGVLATTE-EYADKVFRTSRKFGVKEVELLGCTLRGAPLV 266 (387)
T ss_pred CCEEEEECCcccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECH-HHHhhcccccCCCcccceeeeceecCchHHH
Confidence 8899999964211 0 0 2222221 1111100000 0000001 111 2233455
Q ss_pred HHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC--CCceeEEEEeeccccccccccccCccCCccHHHHH
Q psy13453 141 KLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCP--PSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKA 218 (764)
Q Consensus 141 klWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~--P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~ 218 (764)
.+++++..+=. ..++.++..+.++++++.|+++++|+++.+ ...++++|.. | ...... .....-..+
T Consensus 267 ~~~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~-~-~~~~~~-------~~~~~~~~~ 335 (387)
T PRK09331 267 TLMASFPHVVE--RVKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFET-P-SFDEIA-------KKHKRRGFF 335 (387)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeC-C-chhHHh-------hhccccchh
Confidence 66666655422 234567778999999999999999999863 2455666653 2 110000 000001256
Q ss_pred HHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 219 VYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 219 L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
+.++|.+.|...+. .....++|+.. ...++++++.+++.++++.++
T Consensus 336 ~~~~L~~~gI~~~~---~~~~~i~ri~~--~g~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 336 LYEELKKRGIHGIK---PGATKEFKLST--YGLTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred HHHHHHHcCceEEc---cCCceEEEEEe--ccCCHHHHHHHHHHHHHHHHh
Confidence 88999888874221 12235667644 335789999999999987654
No 166
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.90 E-value=2.1e-08 Score=113.93 Aligned_cols=151 Identities=18% Similarity=0.140 Sum_probs=111.0
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|....+|+ .++++.|.+ ..++|++|+.|+..++.... . ++..|+
T Consensus 62 ~~p~~~~Le~----~lA~leg~~-----------~al~~~sG~~Ai~~al~~ll----~---------------~GD~Vl 107 (431)
T PRK08248 62 MNPTTDVFEK----RIAALEGGI-----------GALAVSSGQAAITYSILNIA----S---------------AGDEIV 107 (431)
T ss_pred CCchHHHHHH----HHHHHhCCC-----------cEEEECCHHHHHHHHHHHHh----C---------------CCCEEE
Confidence 4566666665 577777743 46899999999887775431 1 112466
Q ss_pred ecCCcchh----HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSS----VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~S----v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...|.. +...+...|++++.|+++ |+++|+++|++. +-+|++...++.+|.+-|+++|+++|+
T Consensus 108 v~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~-----d~e~l~~ai~~~------tklV~l~sp~NPtG~v~di~~I~~la~ 176 (431)
T PRK08248 108 SSSSLYGGTYNLFAHTLPKLGITVKFVDPS-----DPENFEAAITDK------TKALFAETIGNPKGDVLDIEAVAAIAH 176 (431)
T ss_pred EccCchhhHHHHHHHHHHhCCEEEEEECCC-----CHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHHHHH
Confidence 77766643 334466689998888763 789999888653 337777788889999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~ 758 (764)
++|++++||++|+......| . -. .+|-++.++|||++.|-
T Consensus 177 ~~gi~vIvD~t~a~~~~~~p-l---~~---gaDivv~S~tK~lgg~g 216 (431)
T PRK08248 177 EHGIPLIVDNTFASPYLLRP-I---EH---GADIVVHSATKFIGGHG 216 (431)
T ss_pred HcCCEEEEeCCCCccccCCh-h---Hc---CCCEEEEcCccccCCCC
Confidence 99999999999986443332 1 12 46999999999999774
No 167
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=98.90 E-value=3.2e-08 Score=109.93 Aligned_cols=153 Identities=15% Similarity=0.099 Sum_probs=108.6
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEe
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT 636 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~ 636 (764)
++...++|++. ++.+|.+ .++.+++||.|+++|+.+.. ..++-.|++
T Consensus 24 g~~~~~fE~~~----a~~~g~~-----------~~~~~~sgt~Al~~al~~l~------------------~~~gdeVi~ 70 (363)
T PF01041_consen 24 GPYVEEFEKEF----AEYFGVK-----------YAVAVSSGTSALHLALRALG------------------LGPGDEVIV 70 (363)
T ss_dssp SHHHHHHHHHH----HHHHTSS-----------EEEEESSHHHHHHHHHHHTT------------------GGTTSEEEE
T ss_pred CHHHHHHHHHH----HHHhCCC-----------eEEEeCChhHHHHHHHHhcC------------------CCcCceEec
Confidence 78888888854 5555643 47899999999998887521 112346889
Q ss_pred cCCcchhHHHHHHhCCCceEEEecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCC
Q psy13453 637 SDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNI 715 (764)
Q Consensus 637 S~~aH~Sv~kAa~~lGl~v~~Vp~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~gl 715 (764)
+..+..+...|...+|..++.+++| +++.||+++|+++|.+.++ +|+. +...|...|+++|.++|+++|+
T Consensus 71 p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~------ai~~---~h~~G~~~d~~~i~~~~~~~~i 141 (363)
T PF01041_consen 71 PAYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKTK------AILV---VHLFGNPADMDAIRAIARKHGI 141 (363)
T ss_dssp ESSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTEE------EEEE---E-GGGB---HHHHHHHHHHTT-
T ss_pred CCCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCcc------EEEE---ecCCCCcccHHHHHHHHHHcCC
Confidence 9999999999999999999999999 7899999999999988754 4433 3456777899999999999999
Q ss_pred EEEEeccccccccccchhhhhhcCCCcccEEEEcCC--ccCCC
Q psy13453 716 WLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTH--KWLLV 756 (764)
Q Consensus 716 wLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~H--K~l~~ 756 (764)
+++-|+|++.+...- .+.-|- ..|.-++|+| |.+.+
T Consensus 142 ~lIeD~a~a~g~~~~----g~~~G~-~gd~~~fSf~~~K~i~~ 179 (363)
T PF01041_consen 142 PLIEDAAQAFGARYK----GRPVGS-FGDIAIFSFHPTKIITT 179 (363)
T ss_dssp EEEEE-TTTTT-EET----TEETTS-SSSEEEEESSTTSSS-S
T ss_pred cEEEccccccCceeC----CEeccC-CCCceEecCCCCCCCcC
Confidence 999999998875432 222232 4577777776 77743
No 168
>PRK05939 hypothetical protein; Provisional
Probab=98.90 E-value=2.7e-08 Score=112.04 Aligned_cols=150 Identities=15% Similarity=0.107 Sum_probs=108.5
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|....+|+ .++++.|... .+.+++|+.|+..++.+. .. +...|+
T Consensus 45 g~p~~~~lE~----~la~leg~~~-----------~v~~ssG~~Ai~~~l~al----l~---------------~Gd~Vv 90 (397)
T PRK05939 45 GTPTTAALEA----KITKMEGGVG-----------TVCFATGMAAIAAVFLTL----LR---------------AGDHLV 90 (397)
T ss_pred CCHHHHHHHH----HHHHHhCCCe-----------EEEeCCHHHHHHHHHHHH----cC---------------CCCEEE
Confidence 5677778887 4556666543 466777787776665432 11 112456
Q ss_pred ecCCcc---hhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh
Q psy13453 636 TSDQSN---SSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE 712 (764)
Q Consensus 636 ~S~~aH---~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~ 712 (764)
+++..| .++.+.+...|+.++.++++ |+++|+++|.+. +-+|+....++.+|.+.||++|+++|++
T Consensus 91 ~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-----d~e~l~~~l~~~------tklV~vesp~NptG~v~dl~~I~~la~~ 159 (397)
T PRK05939 91 SSQFLFGNTNSLFGTLRGLGVEVTMVDAT-----DVQNVAAAIRPN------TRMVFVETIANPGTQVADLAGIGALCRE 159 (397)
T ss_pred ECCCccccHHHHHHHHHhcCCEEEEECCC-----CHHHHHHhCCCC------CeEEEEECCCCCCCCHHhHHHHHHHHHH
Confidence 666654 45556667789999888763 789999988643 4478888889999999999999999999
Q ss_pred cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 713 YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 713 ~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+|++++||++|+.+..+-+ .-. .+|-+..++|||++.+
T Consensus 160 ~gi~livD~t~a~~~~~~~----~~~---gaDivv~S~sK~~~g~ 197 (397)
T PRK05939 160 RGLLYVVDNTMTSPWLFRP----KDV---GASLVINSLSKYIAGH 197 (397)
T ss_pred cCCEEEEECCcccccccCc----ccc---CCEEEEecCeecccCC
Confidence 9999999999986543222 111 4699999999999865
No 169
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=98.89 E-value=2.3e-08 Score=112.20 Aligned_cols=153 Identities=17% Similarity=0.099 Sum_probs=110.5
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEE
Q psy13453 555 LSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVA 634 (764)
Q Consensus 555 ~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi 634 (764)
...|...++|+ .+++++|.+ ..++++||+.|+..++.+. .. +...|
T Consensus 50 ~~np~~~~lE~----~lA~l~g~~-----------~~l~~~sG~~Ai~~~l~~l----l~---------------~GD~V 95 (385)
T PRK08574 50 EENPTLRPLEE----ALAKLEGGV-----------DALAFNSGMAAISTLFFSL----LK---------------AGDRV 95 (385)
T ss_pred CCCccHHHHHH----HHHHHhCCC-----------cEEEeCCHHHHHHHHHHHH----hC---------------CCCEE
Confidence 34566667666 567777753 3578899999988777643 11 12257
Q ss_pred EecCCcchhHHHHHH---hCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 635 YTSDQSNSSVEKSAI---IGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 635 ~~S~~aH~Sv~kAa~---~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
+++...|.+....++ ..|+.++.+. +|+++|+++|++. .+-+|+....++.+|.+-|+++|+++|+
T Consensus 96 lv~~~~y~~~~~~~~~~~~~g~~v~~~~------~d~~~l~~~i~~~-----~tklV~ie~p~NPtG~v~dl~~I~~la~ 164 (385)
T PRK08574 96 VLPMEAYGTTLRLLKSLEKFGVKVVLAY------PSTEDIIEAIKEG-----RTKLVFIETMTNPTLKVIDVPEVAKAAK 164 (385)
T ss_pred EEcCCCchhHHHHHHHhhccCcEEEEEC------CCHHHHHHhcCcc-----CceEEEEECCCCCCCEecCHHHHHHHHH
Confidence 788889988776654 3466666553 3578888888651 1336677888888999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~ 759 (764)
++|+|++||.+|+.+....+ .-. .+|.++.++|||++.|-+
T Consensus 165 ~~gi~livD~t~a~~~~~~~----l~~---GaDivv~S~sK~l~g~~d 205 (385)
T PRK08574 165 ELGAILVVDNTFATPLLYRP----LRH---GADFVVHSLTKYIAGHND 205 (385)
T ss_pred HcCCEEEEECCCCccccCCh----hhh---CCcEEEeeCceeecCCCC
Confidence 99999999999987644322 112 369999999999998754
No 170
>PRK07503 methionine gamma-lyase; Provisional
Probab=98.89 E-value=2e-08 Score=113.30 Aligned_cols=156 Identities=15% Similarity=0.105 Sum_probs=110.8
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|....+|+ .+++++|.+. .+++++|+.++.+++.+. .. ++-.|+
T Consensus 63 ~~p~~~~le~----~lA~l~g~~~-----------~i~~~sG~~Al~~~l~~l----l~---------------~Gd~Vi 108 (403)
T PRK07503 63 SNPTLALLEQ----RMASLEGGEA-----------AVALASGMGAITATLWTL----LR---------------PGDEVI 108 (403)
T ss_pred CCchHHHHHH----HHHHHhCCCc-----------EEEEcCHHHHHHHHHHHH----cC---------------CCCEEE
Confidence 4566666664 6788888743 478888998876666432 11 112456
Q ss_pred ecCCcchh----HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSS----VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~S----v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...|.. ....+...|+.++.|+.+ |+++|+++|++. +-+|+....++.+|.+-|+++|+++|+
T Consensus 109 v~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~~i~~~------tklV~le~p~NPtG~~~di~~I~~la~ 177 (403)
T PRK07503 109 VDQTLYGCTFAFLHHGLGEFGVTVRHVDLT-----DPAALKAAISDK------TRMVYFETPANPNMRLVDIAAVAEIAH 177 (403)
T ss_pred EccCccchHHHHHHHHHhhCCEEEEEeCCC-----CHHHHHHhcCcc------CcEEEEeCCCCCCCeeeCHHHHHHHHH
Confidence 66665543 334456688888888764 689999988653 336777788899999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC--ceee
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD--CSAM 763 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~--~g~l 763 (764)
++|++++||.+|+......+ . +. .+|-++.+++|+++.+-+ .|++
T Consensus 178 ~~gi~lIvD~a~a~~~~~~~-l-----~~-g~Di~v~S~tK~l~g~gd~~gG~v 224 (403)
T PRK07503 178 GAGAKVVVDNTYCTPYLQRP-L-----EL-GADLVVHSATKYLGGHGDITAGLV 224 (403)
T ss_pred HcCCEEEEECCCcccccCCc-h-----hh-CCCEEEccccccccCCCceeEEEE
Confidence 99999999999986533211 1 11 469999999999997654 5654
No 171
>PRK08064 cystathionine beta-lyase; Provisional
Probab=98.89 E-value=2.1e-08 Score=112.58 Aligned_cols=155 Identities=11% Similarity=0.083 Sum_probs=110.4
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|....+|+ .++++.|.+. .+++++|+.++..++. .+.. +-.|+
T Consensus 52 ~~p~~~~le~----~lA~l~g~~~-----------~v~~~sG~~ai~~~l~-----~l~~---------------Gd~Vl 96 (390)
T PRK08064 52 GNPTREALED----IIAELEGGTK-----------GFAFASGMAAISTAFL-----LLSK---------------GDHVL 96 (390)
T ss_pred CChhHHHHHH----HHHHHhCCCC-----------eEEECCHHHHHHHHHH-----HhCC---------------CCEEE
Confidence 3455555554 6777777643 3666777776544442 1111 12366
Q ss_pred ecCCcchhH----HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSSV----EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~Sv----~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...|.+. .+.+...|+.++.|+.+ |++++++++++. +-+|+.+..++.+|.+-|+++|.++|+
T Consensus 97 v~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~l~~~------tklV~l~~p~NptG~~~dl~~I~~la~ 165 (390)
T PRK08064 97 ISEDVYGGTYRMITEVLSRFGIEHTFVDMT-----NLEEVAQNIKPN------TKLFYVETPSNPLLKVTDIRGVVKLAK 165 (390)
T ss_pred EccCccchHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCCC------ceEEEEECCCCCCcEeccHHHHHHHHH
Confidence 777777543 34556689999998874 688888888654 348888999999999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC--ceee
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD--CSAM 763 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~--~g~l 763 (764)
++|+++.||+||+.+....+. . . .+|-+..++|||++.|.+ .|++
T Consensus 166 ~~g~~vvvD~a~~~~~~~~~~-~---~---g~Divv~S~tK~~~G~~~~laG~~ 212 (390)
T PRK08064 166 AIGCLTFVDNTFLTPLLQKPL-D---L---GADVVLHSATKFLAGHSDVLAGLA 212 (390)
T ss_pred HcCCEEEEECCCCcccccCch-h---h---CCcEEEeecceeccCCccceeEEE
Confidence 999999999999876543321 1 1 369999999999988876 3654
No 172
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=98.89 E-value=2.7e-08 Score=112.00 Aligned_cols=149 Identities=14% Similarity=0.083 Sum_probs=107.4
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEe
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT 636 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~ 636 (764)
.|....+| +.+++++|.+. .+++++|+.++..++.+. .. ++..|++
T Consensus 64 ~p~~~~Le----~~lA~l~G~~~-----------~~~~~sG~~Ai~~~l~~~----l~---------------~Gd~Vl~ 109 (398)
T PRK07504 64 NPTVDMFE----KRMCALEGAED-----------ARATASGMAAVTAAILCQ----VK---------------AGDHVVA 109 (398)
T ss_pred CchHHHHH----HHHHHHhCCCe-----------eeEecCHHHHHHHHHHHH----hC---------------CCCEEEE
Confidence 55666666 46777888765 356788898887665431 11 1124666
Q ss_pred cCCcchhHH----HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh
Q psy13453 637 SDQSNSSVE----KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE 712 (764)
Q Consensus 637 S~~aH~Sv~----kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~ 712 (764)
+...+.+.. ..+...|+.++.++ .+|+++++++|++. +-+|+.+..++.+|.+-|+++|+++|++
T Consensus 110 ~~~~y~~~~~~~~~~~~~~G~~v~~vd-----~~d~e~l~~ai~~~------tklV~lesp~NptG~v~dl~~I~~la~~ 178 (398)
T PRK07504 110 ARALFGSCRYVVETLLPRYGIESTLVD-----GLDLDNWEKAVRPN------TKVFFLESPTNPTLEVIDIAAVAKIANQ 178 (398)
T ss_pred cCCchhHHHHHHHHHHhhcCeEEEEEC-----CCCHHHHHHhcCcC------ceEEEEECCCCCCcEecCHHHHHHHHHH
Confidence 766665433 33455788877774 27899999988654 3488889999999999999999999999
Q ss_pred cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 713 YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 713 ~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+|++++||+||+.+....+. .+ .+|.++.++|||++.+
T Consensus 179 ~gi~lvvD~a~a~~~~~~~~------~~-gaDivv~S~sK~l~g~ 216 (398)
T PRK07504 179 AGAKLVVDNVFATPLFQKPL------EL-GAHIVVYSATKHIDGQ 216 (398)
T ss_pred cCCEEEEECCccccccCCch------hh-CCCEEEeeccccccCC
Confidence 99999999999865443221 11 3699999999999875
No 173
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=98.89 E-value=5.5e-08 Score=110.18 Aligned_cols=219 Identities=10% Similarity=0.035 Sum_probs=148.9
Q ss_pred eHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceec
Q psy13453 23 ESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVG 97 (764)
Q Consensus 23 Sv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVD 97 (764)
.+...++..|+.. +.||++.++.+|+++|+++|.+. +-+++-+..+.++|.+-|+++|++ +++++||
T Consensus 138 ~~~~~a~~~g~~v---~~v~~~~~~~~~~~~l~~~i~~~-----t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD 209 (424)
T PLN02855 138 PWQLVAQKTGAVL---KFVGLTPDEVLDVEQLKELLSEK-----TKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVD 209 (424)
T ss_pred HHHHHHHHcCCEE---EEEecCCCCCcCHHHHHHHhccC-----ceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEE
Confidence 3566678889877 99999988889999999999752 225567889999999999999876 7899999
Q ss_pred ccc--------------------ccccc-----eeeeecCCCcccc---ccccc------c-c---cC----CcccCCCC
Q psy13453 98 GVL--------------------RRVYS-----SCLVPRGQKSLRT---TVLFH------F-L---FQ----HWQIPLGR 135 (764)
Q Consensus 98 a~l--------------------~~~y~-----s~ll~rd~~~l~~---~~s~~------~-d---~~----d~tle~SR 135 (764)
++. .++++ ++++.+.. .+.. .+... + + |. .+. .|+.
T Consensus 210 ~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~-~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e-~GT~ 287 (424)
T PLN02855 210 ACQSVPHMPVDVQTLGADFLVASSHKMCGPTGIGFLWGKSD-LLESMPPFLGGGEMISDVFLDHSTYAPPPSRFE-AGTP 287 (424)
T ss_pred hhhhcCCcCCCchhcCCCEEEeecccccCCCccEEEEEchh-hhhcCCCEecCCCceeeeecCccccCCChhhcc-CCCh
Confidence 952 12211 34444322 1111 00000 0 0 00 011 1233
Q ss_pred c-ccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC------ceeEEEEeeccccccccccccCc
Q psy13453 136 R-FRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS------MGLVCFRLKVRFWDKLDNLFGTI 208 (764)
Q Consensus 136 r-~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~------l~iV~Fry~P~~~~~~~~~~~~~ 208 (764)
. ...+.+++++.++-..|+.++.++..++++++.+.|++.++++++++++ .++++|++..
T Consensus 288 ~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~------------- 354 (424)
T PLN02855 288 AIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEG------------- 354 (424)
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECC-------------
Confidence 2 2335778889988888999999999999999999999999999997532 4789997531
Q ss_pred cCCccHHHHHHHHHHHhc-CcEEEEece--------eCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 209 SFGDNDLNKAVYDRIIAR-KVIYIVKGS--------FQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 209 ~~~~d~~n~~L~~~L~~~-G~~~vs~t~--------l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
.+ ...+.+.|.++ |...-+... +.-..++|++ .++.++++|++.+++.|+++...+
T Consensus 355 ---~~--~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS-~~~ynt~~di~~l~~~l~~~~~~~ 419 (424)
T PLN02855 355 ---IH--PTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARAS-LYFYNTKEEVDAFIHALKDTIAFF 419 (424)
T ss_pred ---cC--HHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEE-eccCCCHHHHHHHHHHHHHHHHHH
Confidence 11 23577777766 764332210 1113579996 567788999999999999987664
No 174
>PRK07050 cystathionine beta-lyase; Provisional
Probab=98.89 E-value=3e-08 Score=111.52 Aligned_cols=152 Identities=13% Similarity=0.095 Sum_probs=110.2
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|...++|+ .++++.|.+ ..++++|||+|+..++.+.. + +...|+
T Consensus 63 ~~pt~~~Le~----~lA~l~g~~-----------~~l~~~sgt~Ai~~~l~al~----~---------------~GD~Vl 108 (394)
T PRK07050 63 ATPTSLALAQ----RLAEIEGGR-----------HALLQPSGLAAISLVYFGLV----K---------------AGDDVL 108 (394)
T ss_pred CCHHHHHHHH----HHHHHhCCC-----------eEEEeccHHHHHHHHHHHHh----C---------------CCCEEE
Confidence 3455555554 677777743 47899999999988876541 1 122577
Q ss_pred ecCCcchhHH----HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSSVE----KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~Sv~----kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...|.+.. ..+..+|++++.++.+ +.++|+++|++. +-+|+....++.+|.+.|+++|+++|+
T Consensus 109 ~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~-----~~~~l~~~i~~~------tklV~le~p~Np~~~~~di~~I~~ia~ 177 (394)
T PRK07050 109 IPDNAYGPNRDHGEWLARDFGITVRFYDPL-----IGAGIADLIQPN------TRLIWLEAPGSVTMEVPDVPAITAAAR 177 (394)
T ss_pred EecCCcccHHHHHHHHHHhcCeEEEEECCC-----CHHHHHHhcCCC------CeEEEEECCCCCCccHhhHHHHHHHHH
Confidence 7887887644 3456688888887643 346788877543 347778888888999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~ 759 (764)
++|+++++|+||+.+...-| +-.| +|.++.+++|+++...+
T Consensus 178 ~~gi~livD~a~a~~~~~~~----l~~G---aDi~v~S~tK~~~g~~~ 218 (394)
T PRK07050 178 ARGVVTAIDNTYSAGLAFKP----FEHG---VDISVQALTKYQSGGSD 218 (394)
T ss_pred HcCCEEEEECCcccccccCH----HHcC---CeEEEEECCceecCCCC
Confidence 99999999999988654322 2223 59999999999976543
No 175
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=98.88 E-value=5.8e-08 Score=108.99 Aligned_cols=173 Identities=15% Similarity=0.030 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 560 CTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 560 ~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
....+.++.+.+++++|.+. ...+|++|||+||..|+.++|... + ++.+++.+..
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~---------~~v~~~~sgsea~~~al~~~~~~~-~---------------~~~ii~~~~~ 131 (413)
T cd00610 77 YNEPAVELAELLLALTPEGL---------DKVFFVNSGTEAVEAALKLARAYT-G---------------RKKIISFEGA 131 (413)
T ss_pred CCHHHHHHHHHHHHhCCCCC---------CEEEEcCcHHHHHHHHHHHHHHHc-C---------------CCeEEEECCC
Confidence 35677888888999988433 257899999999999999988531 1 1235666677
Q ss_pred cchhHHHHHHhCC------------CceEEEecCC------CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc
Q psy13453 640 SNSSVEKSAIIGD------------VPVRQLRSDD------NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD 701 (764)
Q Consensus 640 aH~Sv~kAa~~lG------------l~v~~Vp~d~------~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD 701 (764)
.|.+..-+....+ .+++.+|.+. +...|+++|++.+++. +..+.+|+++-..+.+|.+-
T Consensus 132 yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~~~G~~~ 208 (413)
T cd00610 132 YHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEH---PEEVAAVIVEPIQGEGGVIV 208 (413)
T ss_pred cCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcC---CCCEEEEEEccccCCCCCcc
Confidence 7876665554432 2466777652 3456999999998652 22355666666666778877
Q ss_pred c----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 702 N----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 702 p----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+ +++|+++|++||+++++|.+|+++......+.....++ ..|-++++ |+++..+.+|++
T Consensus 209 ~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~-~~d~~t~s--K~l~~g~~~g~~ 271 (413)
T cd00610 209 PPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTLG--KGLGGGLPLGAV 271 (413)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCC-CCCeEEEc--ccccCccccEEE
Confidence 6 99999999999999999999986421111111112233 34666555 999987777765
No 176
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=98.88 E-value=7.1e-08 Score=108.78 Aligned_cols=157 Identities=11% Similarity=-0.001 Sum_probs=110.3
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
++.+.+++++|.+. .+++++|+++|..++.+.... .+..+|+++...|.++.
T Consensus 95 ~Le~~la~~~g~~~-----------~i~~~sG~~a~~~~i~~l~~~-----------------~~g~~vi~~~~~h~s~~ 146 (410)
T PRK13392 95 LLERELADLHGKES-----------ALLFTSGYVSNDAALSTLGKL-----------------LPGCVILSDALNHASMI 146 (410)
T ss_pred HHHHHHHHHhCCCC-----------EEEECcHHHHHHHHHHHHhcC-----------------CCCCEEEEehhhhHHHH
Confidence 45567888888543 466677789988877632110 01225777888999999
Q ss_pred HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccc
Q psy13453 646 KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAG 725 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg 725 (764)
.++...|..++.++.+ |.+.+++.+++.. ...+.+|+....++.+|.+-|+++|.++|++||+|++||.||+.
T Consensus 147 ~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~--~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~ 219 (410)
T PRK13392 147 EGIRRSGAEKQVFRHN-----DLADLEEQLASVD--PDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAV 219 (410)
T ss_pred HHHHHcCCeEEEEeCC-----CHHHHHHHHHhcc--CCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccc
Confidence 9998889887776532 5667777776432 12456788888899999999999999999999999999999984
Q ss_pred cccccchhhh--hhcC-CCcccEEEEcCCccCCCCc
Q psy13453 726 SALLLPEYAH--LKRG-LEYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 726 ~~l~~~~~r~--~l~g-ie~aDSit~d~HK~l~~P~ 758 (764)
+.+ .+..+. ...+ .++.|-++.+++|+++.+-
T Consensus 220 g~~-g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G 254 (410)
T PRK13392 220 GLY-GARGGGIAERDGLMDRIDMIQGTLAKAFGCLG 254 (410)
T ss_pred cCc-CCCCCchhhhccCCCCCcEEEEEChHhhhccc
Confidence 432 121111 1112 2456877789999988753
No 177
>PLN02509 cystathionine beta-lyase
Probab=98.87 E-value=2.5e-08 Score=114.07 Aligned_cols=151 Identities=13% Similarity=0.098 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS 643 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S 643 (764)
-+++.++++++.|-+ ..+++++|+.++ .++... .. +...|++++..|.+
T Consensus 135 ~~aLE~~lA~leg~e-----------~ai~~~SG~aAi-~~il~l----l~---------------~GD~VI~~~~~y~~ 183 (464)
T PLN02509 135 RDALESLLAKLDKAD-----------RAFCFTSGMAAL-SAVTHL----IK---------------NGEEIVAGDDVYGG 183 (464)
T ss_pred HHHHHHHHHHHhCCC-----------EEEEeCcHHHHH-HHHHHH----hC---------------CCCEEEEcCCchhh
Confidence 444556778887643 356777777553 333321 11 11246778888877
Q ss_pred HHHH----HHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEE
Q psy13453 644 VEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHV 719 (764)
Q Consensus 644 v~kA----a~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHV 719 (764)
..+. +...|+.++.++. .|+++++++|.+. +-+|+....++.+|.+.||++|+++|++||++++|
T Consensus 184 t~~ll~~~l~~~G~~v~~vd~-----~d~e~l~~ai~~~------TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIV 252 (464)
T PLN02509 184 SDRLLSQVVPRSGVVVKRVNT-----TNLDEVAAAIGPQ------TKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLV 252 (464)
T ss_pred HHHHHHHHHHHCCeEEEEeCC-----CCHHHHHHhCCcC------CeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 6543 3457888887764 3688898888553 34888899999999999999999999999999999
Q ss_pred eccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC--ceee
Q psy13453 720 DAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD--CSAM 763 (764)
Q Consensus 720 DaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~--~g~l 763 (764)
|.||+.+....+ . + ..+|.+..++|||++.|-+ .|++
T Consensus 253 D~A~a~~~~~~p----l--~-~gaDivv~S~tK~l~G~gdv~gG~v 291 (464)
T PLN02509 253 DNSIMSPVLSRP----L--E-LGADIVMHSATKFIAGHSDVMAGVL 291 (464)
T ss_pred ECCccccccCCh----h--h-cCCcEEEecCcccccCCCccceeEE
Confidence 999987654322 1 1 1469999999999998876 5654
No 178
>PRK09064 5-aminolevulinate synthase; Validated
Probab=98.87 E-value=1e-07 Score=107.29 Aligned_cols=159 Identities=12% Similarity=0.045 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
.-.++.+.+++++|.+. .++.++|++||..++..++.. .++.+|+.....|.
T Consensus 92 ~~~~l~~~la~~~g~~~-----------~~~~~sG~~an~~ai~~l~~~-----------------~~~~~i~~~~~~h~ 143 (407)
T PRK09064 92 YHVELERELADLHGKEA-----------ALVFTSGYVSNDATLSTLAKL-----------------IPDCVIFSDELNHA 143 (407)
T ss_pred HHHHHHHHHHHHhCCCc-----------EEEECcHHHHHHHHHHHHhCC-----------------CCCCEEEEeCcchH
Confidence 34445557777777533 467777889999888765431 01235777778899
Q ss_pred hHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEecc
Q psy13453 643 SVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAA 722 (764)
Q Consensus 643 Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA 722 (764)
|+..++...|..+..++. .|+++|++.++... ...+-+|+.....+.+|.+.|+++|.++|++||+||+||.|
T Consensus 144 s~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~--~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa 216 (407)
T PRK09064 144 SMIEGIRRSRCEKHIFRH-----NDVAHLEELLAAAD--PDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEV 216 (407)
T ss_pred HHHHHHHHcCCcEEEECC-----CCHHHHHHHHHhcc--CCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECC
Confidence 998888888887766553 37889999886431 12355777777888899999999999999999999999999
Q ss_pred ccccccccchhhh--hhcCC-CcccEEEEcCCccCCCC
Q psy13453 723 YAGSALLLPEYAH--LKRGL-EYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 723 ~Gg~~l~~~~~r~--~l~gi-e~aDSit~d~HK~l~~P 757 (764)
|+.+.+ .+.... ...++ +..|-++-+++|.++.+
T Consensus 217 ~~~G~~-g~~g~g~~~~~~~~~~~div~~t~sKa~g~~ 253 (407)
T PRK09064 217 HAVGMY-GPRGGGIAERDGLMDRIDIIEGTLAKAFGVM 253 (407)
T ss_pred Cccccc-CCCCCChHHhcCCCCCCeEEEEecchhhhcc
Confidence 984322 111111 11232 34588888999988754
No 179
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=98.87 E-value=2.4e-08 Score=110.22 Aligned_cols=156 Identities=18% Similarity=0.093 Sum_probs=107.0
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEE-eCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGII-QSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS 643 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~Gvf-TsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S 643 (764)
.++.+.+++++|.+++ ..++ |+|+++++..++.+. .. +...|+++.-++..
T Consensus 72 ~~lr~~ia~~~~~~~~---------~i~~~~~Ga~~~i~~~~~~~----~~---------------~gd~vlv~~p~y~~ 123 (361)
T PRK00950 72 PELREALSKYTGVPVE---------NIIVGGDGMDEVIDTLMRTF----ID---------------PGDEVIIPTPTFSY 123 (361)
T ss_pred HHHHHHHHHHhCCCHH---------HEEEeCCCHHHHHHHHHHHh----cC---------------CCCEEEEcCCChHH
Confidence 4455667777787653 4567 566677655444321 11 11246666665666
Q ss_pred HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccc
Q psy13453 644 VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAY 723 (764)
Q Consensus 644 v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~ 723 (764)
...+++..|++++.+|.++++.+|+++|++.+... +-+|+.+..++.+|.+-|+++|.++|+++|+|+++|.+|
T Consensus 124 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y 197 (361)
T PRK00950 124 YEISAKAHGAKPVYAKREEDFSLDVDSVLNAITEK------TKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAY 197 (361)
T ss_pred HHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhccC------CCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECch
Confidence 66778889999999998888899999999988542 336666788999999999999999999999999999999
Q ss_pred cccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 724 AGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 724 Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+.+. .......+...++ --+.-++.|.++.|
T Consensus 198 ~~~~--~~~~~~~~~~~~~-vi~~~S~SK~~g~~ 228 (361)
T PRK00950 198 VEFA--EYDYTPLALEYDN-LIIGRTFSKVFGLA 228 (361)
T ss_pred hhhC--ccchHHHHHhcCC-EEEEEeehHhhcCc
Confidence 7643 1122222222211 12335888988755
No 180
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=98.87 E-value=9.1e-08 Score=107.27 Aligned_cols=176 Identities=13% Similarity=0.077 Sum_probs=119.9
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 554 WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
|........+.+.+.+++....|.+-. .....++|+|+|+++..++.+.. . ++..
T Consensus 63 Y~~~~g~~~lr~~ia~~~~~~~~~~~~------~~~~i~it~G~~~al~~~~~~~~----~---------------~gd~ 117 (391)
T PRK07309 63 YTGMAGLLELRQAAADFVKEKYNLDYA------PENEILVTIGATEALSASLTAIL----E---------------PGDK 117 (391)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCC------CCCcEEEeCChHHHHHHHHHHhc----C---------------CCCE
Confidence 433344577888888999887776321 01357899999999877665321 1 1124
Q ss_pred EEecCCcchhHHHHHHhCCCceEEEecCCC-CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHHHHH
Q psy13453 634 AYTSDQSNSSVEKSAIIGDVPVRQLRSDDN-GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEELGPI 709 (764)
Q Consensus 634 i~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~-g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eIa~i 709 (764)
|++..-++.....+++..|.+++.+|++++ +.+|+++|++++++.. ..+-+|+.+..++.+|.+ +++++|+++
T Consensus 118 vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~---~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~ 194 (391)
T PRK07309 118 VLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQG---DKLKAVILNYPANPTGVTYSREQIKALADV 194 (391)
T ss_pred EEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccC---CCeEEEEEECCCCCCCcCcCHHHHHHHHHH
Confidence 666667787788889999999999998754 5799999999986531 124467777788999986 469999999
Q ss_pred HHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 710 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 710 ~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
|++||+|+++|.+|+....-.+.......-...---+.-+++|.++.|
T Consensus 195 ~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 242 (391)
T PRK07309 195 LKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMT 242 (391)
T ss_pred HHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCc
Confidence 999999999999998654311111111100111124567899988755
No 181
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.87 E-value=7.6e-08 Score=106.48 Aligned_cols=161 Identities=14% Similarity=0.112 Sum_probs=123.7
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEe
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT 636 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~ 636 (764)
+|...++|+ ++++.+|... .+.+++||.|+++|+++.- +.+...|++
T Consensus 33 G~~v~~FE~----~~ae~~G~k~-----------ava~~sgT~AL~laL~al~------------------ig~GDeVI~ 79 (374)
T COG0399 33 GPFVRRFEQ----AFAEYLGVKY-----------AVAVSSGTAALHLALLALA------------------IGPGDEVIV 79 (374)
T ss_pred ChHHHHHHH----HHHHHhCCCe-----------EEEecChHHHHHHHHHhcC------------------CCCCCEEEe
Confidence 788888887 7888888754 6899999999999987431 112336889
Q ss_pred cCCcchhHHHHHHhCCCceEEEecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCC
Q psy13453 637 SDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNI 715 (764)
Q Consensus 637 S~~aH~Sv~kAa~~lGl~v~~Vp~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~gl 715 (764)
+..+-.+...+..+.|...+.|.+| +.+-||++.||++|.+.++ -++.| ...|..-|+++|.+||++||+
T Consensus 80 ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tK----AIipV-----hl~G~~~dm~~i~~la~~~~l 150 (374)
T COG0399 80 PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRTK----AIIPV-----HLAGQPCDMDAIMALAKRHGL 150 (374)
T ss_pred cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccCCe----EEEEe-----hhccCCCCHHHHHHHHHHcCC
Confidence 9999999999999999999999999 5589999999999988643 22333 345666699999999999999
Q ss_pred EEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 716 WLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 716 wLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
|+.-|+|++-+...-.+ .+-.+..+-+++|-++|.+.+- .-|++
T Consensus 151 ~vIEDaAqa~Ga~y~gk---~vGt~Gd~~~fSF~~~K~ittg-EGGav 194 (374)
T COG0399 151 PVIEDAAQAHGATYKGK---KVGSFGDIGAFSFHATKNLTTG-EGGAV 194 (374)
T ss_pred eEEEEcchhccCeecCc---ccccccceEEEEecCCCCcccc-CceEE
Confidence 99999999887644332 2223445678889999987654 44443
No 182
>PLN00175 aminotransferase family protein; Provisional
Probab=98.87 E-value=7.1e-08 Score=109.14 Aligned_cols=186 Identities=15% Similarity=0.085 Sum_probs=126.5
Q ss_pred HHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccC
Q psy13453 540 GDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSK 619 (764)
Q Consensus 540 ad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~ 619 (764)
.+.+...+......|.......++.+.+.+|+.+..|++-+ .....++|+|+++++..++.+. ..
T Consensus 73 ~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~------~~~~I~vt~G~~~al~~~~~~l----~~----- 137 (413)
T PLN00175 73 KEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVD------PEKEVTVTSGCTEAIAATILGL----IN----- 137 (413)
T ss_pred HHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCC------CCCCEEEeCCHHHHHHHHHHHh----CC-----
Confidence 34444444332334555556678888888999888776432 0124788999999876655432 11
Q ss_pred CCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcc
Q psy13453 620 NPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTC 698 (764)
Q Consensus 620 ~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~G 698 (764)
+...|++.+-.+.....+++..|.+++.||.+ +++.+|+++|++++.+. +-+|+.+..++.+|
T Consensus 138 ----------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~------~k~i~i~~p~NPtG 201 (413)
T PLN00175 138 ----------PGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTSK------TRAILINTPHNPTG 201 (413)
T ss_pred ----------CCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCcC------ceEEEecCCCCCCC
Confidence 12246677778888888899999999999997 45799999999998543 23667778889999
Q ss_pred ccc---cHHHHHHHHHhcCCEEEEeccccccccccchhhh--hhcCCCcccEEEEcCCccCCCC
Q psy13453 699 AFD---NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 699 aiD---pl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~--~l~gie~aDSit~d~HK~l~~P 757 (764)
.+- .+++|+++|++|++|+++|.+|..... .++... .+.+...-.-+..++-|.++.|
T Consensus 202 ~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~-~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~ 264 (413)
T PLN00175 202 KMFTREELELIASLCKENDVLAFTDEVYDKLAF-EGDHISMASLPGMYERTVTMNSLGKTFSLT 264 (413)
T ss_pred cCCCHHHHHHHHHHHHHcCcEEEEecccCcccc-CCcccChhhCCCCcCcEEEEecchhhccCc
Confidence 984 688899999999999999999987532 111111 1222211123556889988755
No 183
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.86 E-value=2.7e-08 Score=111.22 Aligned_cols=182 Identities=17% Similarity=0.210 Sum_probs=115.0
Q ss_pred CccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccc-c
Q psy13453 551 GFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDI-R 629 (764)
Q Consensus 551 ~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~-~ 629 (764)
-..|..+|....+|+.+ +++||.+. .++|..|+.++..+..+.... .+.+ + +. .
T Consensus 67 DD~Y~gdpSv~~Lee~v----ael~G~E~-----------alpthqGRgaE~Il~~~~~~~----~g~e---~---g~~~ 121 (467)
T TIGR02617 67 DEAYSGSRSYYALAESV----KNIFGYQY-----------TIPTHQGRGAEQIYIPVLIKK----REQE---K---GLDR 121 (467)
T ss_pred CcccccCchHHHHHHHH----HHHhCCce-----------EEECCCCchHHHHHHHhhccc----cccc---c---cccc
Confidence 35688999999999855 66778753 689989999998876544321 0000 0 00 0
Q ss_pred CceEEEecCCcchhHHH-HHHhCCCceEEEecC----------CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCC-c
Q psy13453 630 NKLVAYTSDQSNSSVEK-SAIIGDVPVRQLRSD----------DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTG-T 697 (764)
Q Consensus 630 ~~~vi~~S~~aH~Sv~k-Aa~~lGl~v~~Vp~d----------~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~-~ 697 (764)
.+. +++...|+---+ .+.+.|..++.++++ .+|.||+++|+++|++... ...+ ++..+.-++. -
T Consensus 122 ~~~--~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~-~~i~-~v~~tlt~N~~G 197 (467)
T TIGR02617 122 SKM--VAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP-NNVP-YIVATITCNSAG 197 (467)
T ss_pred ccc--ccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC-CCce-eeeeeEEEecCC
Confidence 011 345555665434 355678776665432 3689999999999986422 1233 3333332332 3
Q ss_pred c---ccccHHHHHHHHHhcCCEEEEecccccc-ccccchh---------hhhh-cCCCcccEEEEcCCccCCCCcCce
Q psy13453 698 C---AFDNLEELGPICQEYNIWLHVDAAYAGS-ALLLPEY---------AHLK-RGLEYVDSFDFNTHKWLLVNFDCS 761 (764)
Q Consensus 698 G---aiDpl~eIa~i~~~~glwLHVDaA~Gg~-~l~~~~~---------r~~l-~gie~aDSit~d~HK~l~~P~~~g 761 (764)
| ..++|.+++++|++||+.+|+|||--+- +.+..+. +... +-.+.+||+++|+-|-+++|.|+-
T Consensus 198 Gqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvGg~ 275 (467)
T TIGR02617 198 GQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMGGL 275 (467)
T ss_pred CEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCcccce
Confidence 4 3478899999999999999999985441 2221110 1111 112568999999999999998854
No 184
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=98.86 E-value=5e-08 Score=109.87 Aligned_cols=219 Identities=14% Similarity=0.058 Sum_probs=157.0
Q ss_pred eeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCcee
Q psy13453 22 YESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKV 96 (764)
Q Consensus 22 YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHV 96 (764)
+.|...++-.|+.. +.||+++++.+|.+++++.|++. +-+++-|.-+..+|++-|+++|++ +.|+=|
T Consensus 126 ~pw~~~~~~~Ga~v---~~i~~~~~g~~~~~~~~~~i~~~-----Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~V 197 (405)
T COG0520 126 VPWQELAKRTGAKV---RVIPLDDDGLLDLDALEKLITPK-----TKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLV 197 (405)
T ss_pred HHHHHHHHhcCcEE---EEEecCCCCCcCHHHHHHhcCCC-----ceEEEEECccccccccchHHHHHHHHHHcCCEEEE
Confidence 77888999999977 99999999999999999988763 335568999999999999999997 889999
Q ss_pred cccc--------------------ccc-----cc-eeeeecCCCcccccc--cc------cccc--------CCcccCCC
Q psy13453 97 GGVL--------------------RRV-----YS-SCLVPRGQKSLRTTV--LF------HFLF--------QHWQIPLG 134 (764)
Q Consensus 97 Da~l--------------------~~~-----y~-s~ll~rd~~~l~~~~--s~------~~d~--------~d~tle~S 134 (764)
||+. .|+ .+ ++|..|. +.+.... .. ..+. .-+-+|.+
T Consensus 198 Daaq~~~h~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~-~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~g 276 (405)
T COG0520 198 DAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRK-ELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAG 276 (405)
T ss_pred ECccccCccCCCchhcCCCEEEEcccccccCCCceEEEEEch-HHHhhcCCcccCCCceeeecccccccccCcchhhccC
Confidence 9942 233 22 3444443 3232210 00 0111 11222333
Q ss_pred C--cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC---CceeEEEEeeccccccccccccCcc
Q psy13453 135 R--RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP---SMGLVCFRLKVRFWDKLDNLFGTIS 209 (764)
Q Consensus 135 R--r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P---~l~iV~Fry~P~~~~~~~~~~~~~~ 209 (764)
- -..++.+=++++++-..|+.++-++..++++++.+.++++|++++++++ ...+++|....
T Consensus 277 Tpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~-------------- 342 (405)
T COG0520 277 TPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKG-------------- 342 (405)
T ss_pred CchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCC--------------
Confidence 2 2334566788999999999999999999999999999999999999987 48999997642
Q ss_pred CCccHHHHHHHHHHHhcCcEEEEecee--------CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 210 FGDNDLNKAVYDRIIARKVIYIVKGSF--------QDRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 210 ~~~d~~n~~L~~~L~~~G~~~vs~t~l--------~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
. -...+...|.++|.+..+...- .-...+|+++ .+.+|++||+.|++.|+++.+
T Consensus 343 --~--~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~-~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 343 --I--HPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASL-HLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred --C--CHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEE-eecCCHHHHHHHHHHHHHHhh
Confidence 1 1357888999999543333111 1123399964 455579999999999998753
No 185
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=98.86 E-value=1.9e-08 Score=111.74 Aligned_cols=158 Identities=13% Similarity=-0.014 Sum_probs=109.6
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEe-CChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 555 LSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQ-STASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 555 ~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfT-sGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
..++.+.++-+++.+.+++++|.+++ ...+|+ ++||.++..++.... .+ +.++
T Consensus 34 hr~~~f~~~~~~~r~~l~~l~~~~~~--------~~v~f~~gs~T~a~~~~~~~l~----~~--------------~~l~ 87 (361)
T TIGR01366 34 HRQAPVKNLVGRVREGLAELFSLPDG--------YEVILGNGGATAFWDAATFGLI----EK--------------KSLH 87 (361)
T ss_pred cCChHHHHHHHHHHHHHHHHhCCCCC--------ceEEEECCchhHHHHHHHHhcc----cc--------------cccE
Confidence 56788889999999999999998653 356776 559998766654321 00 1223
Q ss_pred EEecCCcchh-HHHHHHh---CCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHH
Q psy13453 634 AYTSDQSNSS-VEKSAII---GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPI 709 (764)
Q Consensus 634 i~~S~~aH~S-v~kAa~~---lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i 709 (764)
+ +...|.+ +.+.+.. .+ .++.++++....++.+ +. ..+-+|++|..+|.+|.+.|+++|
T Consensus 88 i--~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~-----~~------~~~~lV~~~h~et~tG~~~pi~~I--- 150 (361)
T TIGR01366 88 L--SFGEFSSKFAKAVKLAPWLG-EPIIVTADPGSAPEPQ-----AD------PGVDVIAWAHNETSTGVAVPVRRP--- 150 (361)
T ss_pred E--ecCHHHHHHHHHHHhhhccC-CceEEecCCCCCCCCc-----cC------CCCCEEEEcccCCccceecccccc---
Confidence 3 3333322 2222332 33 6777777654444431 22 235599999999999999999988
Q ss_pred HHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 710 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 710 ~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
++++|+.+.|||+++.+...++- + .+|.+.+++|||++.|-|.+++
T Consensus 151 ~~~~g~~~iVDavqs~g~~~idv-----~---~~D~~~~s~~K~lg~~~Gl~~~ 196 (361)
T TIGR01366 151 EGSDDALVVIDATSGAGGLPVDI-----A---ETDVYYFAPQKNFASDGGLWLA 196 (361)
T ss_pred cccCCCeEEEEcCccccCCCCCH-----H---HCCEEEEEchhhcCCCCceEEE
Confidence 58899999999999988776642 1 2599999999999988665553
No 186
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=98.86 E-value=1.6e-07 Score=105.67 Aligned_cols=143 Identities=12% Similarity=0.054 Sum_probs=100.9
Q ss_pred CcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecC--CCCcc
Q psy13453 589 GGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSD--DNGVL 666 (764)
Q Consensus 589 ~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d--~~g~m 666 (764)
...++|+|+|+++.+++.+.. . ++..|++++-++.....++...|++++.++++ +++.+
T Consensus 97 ~~ii~t~G~t~al~~~~~~l~-----~--------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 157 (403)
T TIGR01265 97 DDVVLTSGCSQAIEICIEALA-----N--------------PGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEI 157 (403)
T ss_pred HHEEEecChHHHHHHHHHHhC-----C--------------CCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCcc
Confidence 357899999999887776532 1 11246677778888888888999999988875 35789
Q ss_pred cHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc---cHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCc-
Q psy13453 667 RGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD---NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY- 742 (764)
Q Consensus 667 d~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD---pl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~- 742 (764)
|++++++.+.+. +.+|+.+..++.+|.+- ++++|.++|+++|+|+++|.+|+....-.+.+. .+..+..
T Consensus 158 d~~~l~~~~~~~------~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~ 230 (403)
T TIGR01265 158 DLDGLEALADEK------TVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFI-PMASFASI 230 (403)
T ss_pred CHHHHHHHhCcC------ccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCcc-chhhhccC
Confidence 999999987543 33677788889999984 689999999999999999999986542111111 1111110
Q ss_pred cc-EEEEcCCccCCCC
Q psy13453 743 VD-SFDFNTHKWLLVN 757 (764)
Q Consensus 743 aD-Sit~d~HK~l~~P 757 (764)
.. -+.-++-|.++.|
T Consensus 231 ~~vi~~~S~SK~~~~p 246 (403)
T TIGR01265 231 VPVLSLGGISKRWVVP 246 (403)
T ss_pred CcEEEEeecccccCCC
Confidence 11 2345889986666
No 187
>PRK06836 aspartate aminotransferase; Provisional
Probab=98.85 E-value=1.4e-07 Score=105.78 Aligned_cols=194 Identities=14% Similarity=0.048 Sum_probs=126.5
Q ss_pred HHHHHHHHHhhccc---CccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHh
Q psy13453 537 SIVGDMLSGAFGLI---GFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMI 613 (764)
Q Consensus 537 ~~lad~l~~~lN~n---~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~ 613 (764)
..+.+.+...++.. ...|........+.+.+.+++....+.+- .....++|+|+|+++..++... .
T Consensus 49 ~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~-------~~~~i~~t~G~~~al~~~~~~l----~ 117 (394)
T PRK06836 49 AAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPL-------TADHIVMTCGAAGALNVALKAI----L 117 (394)
T ss_pred HHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCC-------CcCcEEEeCChHHHHHHHHHHh----c
Confidence 44555555544422 23343444555666667777776655421 1135789999999876665432 1
Q ss_pred hhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCC-CcccHHHHHHHHHHhhhcCCCceEEEEee
Q psy13453 614 NHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDN-GVLRGDALLTAVKEDLAKGLIPCCLIATL 692 (764)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~-g~md~~~Le~~I~~~~~~G~~p~~Vvata 692 (764)
. ++..|++++-++.....++...|++++.+|++++ +.+|+++|++++++. +-+|+.+.
T Consensus 118 ~---------------~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~ 176 (394)
T PRK06836 118 N---------------PGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITPK------TKAVIINS 176 (394)
T ss_pred C---------------CCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCcC------ceEEEEeC
Confidence 1 1224677888888888888889999999999866 789999999998653 33667778
Q ss_pred ccCCcccccc---HHHHHHHHHh------cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCcee
Q psy13453 693 GTTGTCAFDN---LEELGPICQE------YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSA 762 (764)
Q Consensus 693 GTT~~GaiDp---l~eIa~i~~~------~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~ 762 (764)
.++.+|.+-| +++|+++|++ ||+|+.+|.+|.....-...........++ .-+..++.|.++.| .-+|.
T Consensus 177 p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~i~~~S~SK~~~~pGlRiG~ 255 (394)
T PRK06836 177 PNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDN-SIVVYSFSKSLSLPGERIGY 255 (394)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCc-EEEEecchhhccCcceeeEE
Confidence 8999999865 6667777888 899999999998643211111111222221 35667899988754 34454
Q ss_pred e
Q psy13453 763 M 763 (764)
Q Consensus 763 l 763 (764)
+
T Consensus 256 ~ 256 (394)
T PRK06836 256 I 256 (394)
T ss_pred E
Confidence 3
No 188
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=98.85 E-value=3.6e-08 Score=111.04 Aligned_cols=152 Identities=14% Similarity=0.051 Sum_probs=109.0
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEE
Q psy13453 555 LSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVA 634 (764)
Q Consensus 555 ~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi 634 (764)
...|....+|+ .+++++|.+. .+++++|++|+..++.+. .. +.-.|
T Consensus 61 ~~~p~~~~le~----~lA~l~g~~~-----------~i~~ssG~~Ai~~~l~al----l~---------------~GD~V 106 (398)
T PRK08249 61 NTNPTVQAFEE----KVRILEGAEA-----------ATAFSTGMAAISNTLYTF----LK---------------PGDRV 106 (398)
T ss_pred CCChHHHHHHH----HHHHHhCCCe-----------EEEeCChHHHHHHHHHHh----cC---------------CCCEE
Confidence 34566666665 6677777533 577888888877766532 11 11257
Q ss_pred EecCCcchhHHH----HHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHH
Q psy13453 635 YTSDQSNSSVEK----SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPIC 710 (764)
Q Consensus 635 ~~S~~aH~Sv~k----Aa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~ 710 (764)
+++...|.+... .+...|++++.++. .|+++++++|++. +-+|++...++.+|.+-|+++|+++|
T Consensus 107 i~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~-----~d~e~l~~~i~~~------tklV~ie~p~NPtg~v~dl~~I~~la 175 (398)
T PRK08249 107 VSIKDTYGGTNKIFTEFLPRMGVDVTLCET-----GDHEQIEAEIAKG------CDLLYLETPTNPTLKIVDIERLAAAA 175 (398)
T ss_pred EEcCCchHHHHHHHHHHHhhCCeEEEEcCC-----CCHHHHHHhcCCC------CeEEEEECCCCCCCccCCHHHHHHHH
Confidence 788888876533 34567887776653 5899999998653 33777778889999999999999999
Q ss_pred HhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc
Q psy13453 711 QEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 711 ~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~ 758 (764)
+++|++++||++|+......+ .. ..+|.++.++||+++.+-
T Consensus 176 ~~~gi~livD~t~a~~~~~~~----l~---~~~Divv~S~sK~l~g~~ 216 (398)
T PRK08249 176 KKVGALVVVDNTFATPINQNP----LA---LGADLVIHSATKFLSGHA 216 (398)
T ss_pred HHcCCEEEEECCcCccccCCc----hh---hCCCEEeccCceecCCCC
Confidence 999999999999986443221 11 146999999999998654
No 189
>PRK08363 alanine aminotransferase; Validated
Probab=98.85 E-value=4.7e-08 Score=109.71 Aligned_cols=176 Identities=11% Similarity=0.002 Sum_probs=119.8
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 554 WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
|...+....+.+.+.+|+.+..|++-+ ....++|+|+|+++..++.+.. . +...
T Consensus 66 Y~~~~g~~~lr~~ia~~~~~~~g~~~~-------~~~i~it~G~~~al~~~~~~~~----~---------------~gd~ 119 (398)
T PRK08363 66 YGPSEGLPELREAIVKREKRKNGVDIT-------PDDVRVTAAVTEALQLIFGALL----D---------------PGDE 119 (398)
T ss_pred CCCCCCcHHHHHHHHHHHHHhcCCCCC-------hhhEEEeCCHHHHHHHHHHHhC----C---------------CCCE
Confidence 444556677888888888877664321 1367899999998877665331 1 1225
Q ss_pred EEecCCcchhHHHHHHhCCCceEEE-ecCC-CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHHHH
Q psy13453 634 AYTSDQSNSSVEKSAIIGDVPVRQL-RSDD-NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEELGP 708 (764)
Q Consensus 634 i~~S~~aH~Sv~kAa~~lGl~v~~V-p~d~-~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eIa~ 708 (764)
|++++-++.....++...|..++.+ +.++ .+.+|+++|++++.+. +-+|+.+..++.+|.+-+ +++|++
T Consensus 120 Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~~~~l~~ 193 (398)
T PRK08363 120 ILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEK------TKAIAVINPNNPTGALYEKKTLKEILD 193 (398)
T ss_pred EEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcc------eEEEEEECCCCCCCcCcCHHHHHHHHH
Confidence 7788888888888999999887777 5554 4579999999888543 336667788899998755 899999
Q ss_pred HHHhcCCEEEEeccccccccccchhhhhhcCCCcc-cEE-EEcCCccCC-CCcCceee
Q psy13453 709 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYV-DSF-DFNTHKWLL-VNFDCSAM 763 (764)
Q Consensus 709 i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~a-DSi-t~d~HK~l~-~P~~~g~l 763 (764)
+|+++|+|+++|.||+.... .++... +..+... ..| .-+++|+++ ...-+|.+
T Consensus 194 ~a~~~~~~li~Deay~~~~~-~~~~~~-~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~ 249 (398)
T PRK08363 194 IAGEHDLPVISDEIYDLMTY-EGKHVS-PGSLTKDVPVIVMNGLSKVYFATGWRLGYI 249 (398)
T ss_pred HHHHcCeEEEEhhhhhhhcc-CCcccC-HHHcCcCCcEEEEecchhccCCccceEEEE
Confidence 99999999999999986432 111111 1111111 234 458999854 44455554
No 190
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=98.85 E-value=8.7e-09 Score=114.50 Aligned_cols=163 Identities=10% Similarity=-0.012 Sum_probs=115.2
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
.++.+.++-+++.+.++++||.+++ ...+|++|++++-+-|.. ...... + .+-+++.
T Consensus 42 r~~~f~~~~~~~~~~l~~l~~~~~~--------~~v~~~~gsgt~~~Ea~~---~nl~~~-----------g-~~~l~i~ 98 (360)
T PRK05355 42 RSKEFEAVAEEAEADLRELLNIPDN--------YKVLFLQGGASLQFAMVP---MNLLGG-----------G-KKADYVD 98 (360)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCC--------cEEEEEcCCchHHHHHHH---HhcCCC-----------C-CeEEEEE
Confidence 3455568999999999999998653 346677666655444433 121111 0 1235777
Q ss_pred ecCCcchhHHHHHHhCCCceEEEecCC-CCcccHHHHHH-HHHHhhhcCCCceEEEEeeccCCccccc-cHHHHHHHHHh
Q psy13453 636 TSDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLT-AVKEDLAKGLIPCCLIATLGTTGTCAFD-NLEELGPICQE 712 (764)
Q Consensus 636 ~S~~aH~Sv~kAa~~lGl~v~~Vp~d~-~g~md~~~Le~-~I~~~~~~G~~p~~VvataGTT~~GaiD-pl~eIa~i~~~ 712 (764)
.+...|-+.+ -|+..|.. ..++++. .|..+..++++ +|+++ +-+|..|...|.+|... ||.+|
T Consensus 99 ~G~fg~r~~~-~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~------~~~V~~th~eTstGv~~~~i~~i------ 164 (360)
T PRK05355 99 TGSWSKKAIK-EAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDD------AAYVHYTSNETIDGTEFHELPDT------ 164 (360)
T ss_pred CCHHHHHHHH-HHHHhCCc-eEEecccccCCCCCCChhhccCCCC------CCEEEEccCCCcceEecCccccc------
Confidence 8888887754 45555655 6666664 67777766666 55443 45999999999999997 77777
Q ss_pred cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 713 YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 713 ~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
||+.+.|||+++.+....+- +.+ |.++++.||+++ |.|.|++|
T Consensus 165 ~g~l~vVDavss~g~~~idv-----~~~---d~~~~ssqK~lg-P~Glg~l~ 207 (360)
T PRK05355 165 GDVPLVADMSSDILSRPIDV-----SKF---GLIYAGAQKNIG-PAGLTIVI 207 (360)
T ss_pred CCCcEEEEcCccccCccCCH-----HHc---cEEEEecccccc-CCceEEEE
Confidence 89999999999887766542 223 799999999987 99999885
No 191
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=98.85 E-value=3.2e-08 Score=110.65 Aligned_cols=152 Identities=16% Similarity=0.132 Sum_probs=108.5
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|....+|+. ++++.|.+ ..++++||++|+..++.+. .. +...|+
T Consensus 48 gnPt~~~lE~~----lA~l~g~~-----------~~~~~~sG~~Ai~~al~al----l~---------------~GD~Vl 93 (377)
T TIGR01324 48 GTLTHFALQDA----MCELEGGA-----------GCYLYPSGLAAVTNSILAF----VK---------------AGDHVL 93 (377)
T ss_pred CCccHHHHHHH----HHHHhCCC-----------cEEEECcHHHHHHHHHHHh----cC---------------CCCEEE
Confidence 45777777774 55666643 3689999999988877543 11 112466
Q ss_pred ecCCcchhHHHH----HHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~Sv~kA----a~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
+++..+.+.... +...|++++.++.+ +.++|+++|++. +-+|+....++.+|.+.||++|+++|+
T Consensus 94 ~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~-----~~e~l~~~i~~~------tklV~lesp~Np~g~~~dl~~I~~la~ 162 (377)
T TIGR01324 94 MVDSAYEPTRYFCDIVLKRMGVDITYYDPL-----IGEDIATLIQPN------TKVLFLEAPSSITFEIQDIPAIAKAAR 162 (377)
T ss_pred EcCCCcHHHHHHHHHHHHhcCcEEEEECCC-----CHHHHHHhcCCC------ceEEEEECCCCCCCcHHHHHHHHHHHH
Confidence 666666554432 34467777766432 227788877653 348888889999999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~ 759 (764)
++|+|+.||++|+.+...-| .-. .+|-+..+.|||++.+-+
T Consensus 163 ~~g~~livD~t~a~g~~~~p----l~~---gaDivv~S~tK~l~G~~d 203 (377)
T TIGR01324 163 NPGIVIMIDNTWAAGLLFKP----LEH---GVDISIQAGTKYLVGHSD 203 (377)
T ss_pred HcCCEEEEECCCccccccCc----ccc---CceEEEecCceeccCCCC
Confidence 99999999999998765432 112 469999999999998755
No 192
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=98.85 E-value=1.1e-07 Score=104.87 Aligned_cols=175 Identities=15% Similarity=0.147 Sum_probs=121.6
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCC-cEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccC
Q psy13453 552 FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPG-GGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRN 630 (764)
Q Consensus 552 ~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~-~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~ 630 (764)
..|........+.+.+.+|+.+..|++-+ .. ..++|+|++++...++.+.. .. + . +
T Consensus 30 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-------~~~~Iiit~Gs~~ai~~~~~~~~----~~-g----------~-~ 86 (350)
T TIGR03537 30 SQYPSALGTKALREAISGWFERRFGVKLD-------PDAQVLPSAGSKEAIFHFPLVFI----DP-E----------E-D 86 (350)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCC-------CCCcEEEcCChHHHHHHHHHHHc----CC-C----------C-C
Confidence 34554445678889999999888886432 12 57899999998766554321 10 0 0 0
Q ss_pred ceEEEecCCcchhHHHHHHhCCCceEEEecC-C-CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHH
Q psy13453 631 KLVAYTSDQSNSSVEKSAIIGDVPVRQLRSD-D-NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEE 705 (764)
Q Consensus 631 ~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d-~-~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~e 705 (764)
+..|++..-++.....++...|++++.||.+ + .+.+|++++++++.+. +-+|+++..++.+|.+-+ +++
T Consensus 87 ~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~------~~~i~i~~p~NPtG~~~~~~~~~~ 160 (350)
T TIGR03537 87 RRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEE------TKIVWINYPHNPTGATAPRSYLKE 160 (350)
T ss_pred CceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhc------cEEEEEeCCCCCcCcccCHHHHHH
Confidence 1247778888889999999999999999997 3 3569999999998764 336677778999998876 888
Q ss_pred HHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEE-cCCccCCCC
Q psy13453 706 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDF-NTHKWLLVN 757 (764)
Q Consensus 706 Ia~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~-d~HK~l~~P 757 (764)
|+++|++||+++.+|.+|+-...-. .... +.....-..|.+ +++|.++.|
T Consensus 161 l~~~a~~~~~~ii~De~y~~~~~~~-~~~~-~~~~~~~~~i~~~s~SK~~g~~ 211 (350)
T TIGR03537 161 TIAMCREHGIILCSDECYTEIYFGE-PPHS-ALEVGIENVLAFHSLSKRSGMT 211 (350)
T ss_pred HHHHHHHcCcEEEEeccccccccCC-CCCc-hhhcCcCCEEEEeecccccCCc
Confidence 9999999999999999998543211 1100 111111123444 899988655
No 193
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=98.85 E-value=3.3e-08 Score=110.93 Aligned_cols=152 Identities=17% Similarity=0.089 Sum_probs=107.8
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|...++|+ .++++.|.+. ++.+++|++|+..++.+.. . +...|+
T Consensus 59 ~~p~~~~Le~----~lA~~~g~~~-----------~i~~~sG~~Ai~~~l~all----~---------------~Gd~Vl 104 (388)
T PRK07811 59 GNPTRTALEE----QLAALEGGAY-----------GRAFSSGMAATDCLLRAVL----R---------------PGDHIV 104 (388)
T ss_pred CCccHHHHHH----HHHHHhCCCc-----------eEEeCCHHHHHHHHHHHHh----C---------------CCCEEE
Confidence 3456666665 5677777643 4667788888877765441 1 112467
Q ss_pred ecCCcchhHHHHHH-h---CCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSSVEKSAI-I---GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~Sv~kAa~-~---lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...|.+...... . .|+.++.++. .|+++|+++|.++ +-+|+....++.+|.+.|+++|+++|+
T Consensus 105 ~~~~~y~~t~~~~~~~~~~~gi~~~~~d~-----~d~e~l~~~i~~~------tklV~ie~p~NPtg~~~dl~~I~~la~ 173 (388)
T PRK07811 105 IPNDAYGGTFRLIDKVFTRWGVEYTPVDL-----SDLDAVRAAITPR------TKLIWVETPTNPLLSITDIAALAELAH 173 (388)
T ss_pred EcCCCchHHHHHHHHhCcCCCeEEEEeCC-----CCHHHHHHhcCcC------CeEEEEECCCCCcceecCHHHHHHHHH
Confidence 77777775444322 2 4666666654 4899999988654 337888888899999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~ 759 (764)
++|++++||.+|+.+....| . + ..+|.++.+++|+++.|-+
T Consensus 174 ~~gi~lIvD~a~a~~~~~~p----~--~-~gaDivv~S~sK~l~g~~~ 214 (388)
T PRK07811 174 DAGAKVVVDNTFASPYLQQP----L--A-LGADVVVHSTTKYIGGHSD 214 (388)
T ss_pred HcCCEEEEECCCCccccCCc----h--h-hCCcEEEecCceeecCCCC
Confidence 99999999999987544322 1 1 1469999999999998754
No 194
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=98.84 E-value=3.6e-08 Score=110.55 Aligned_cols=152 Identities=16% Similarity=0.126 Sum_probs=110.4
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|....+|+ .++++.|.. ..++|+||++++..++.+.. . +...|+
T Consensus 51 ~npt~~~Le~----~lA~leg~e-----------~ivvt~gg~~Ai~~~l~all----~---------------~Gd~Il 96 (388)
T PRK08861 51 GNPNRGLLEQ----TLSELESGK-----------GAVVTNCGTSALNLWVSALL----G---------------PDDLIV 96 (388)
T ss_pred CCchHHHHHH----HHHHHhCCC-----------eEEEECCHHHHHHHHHHHHc----C---------------CCCEEE
Confidence 4566666666 566776642 47899999999877775431 1 112466
Q ss_pred ecCCcchhHHHHH----HhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~Sv~kAa----~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...|.+..+.. ...|+.++.++. .|++++++++.+. +-+|+++..++.+|.+-|+++|+++|+
T Consensus 97 ~~~~~y~~~~~~~~~~~~~~gi~v~~vd~-----~d~e~l~~~i~~~------tklV~lesP~NPtG~v~dl~~I~~la~ 165 (388)
T PRK08861 97 APHDCYGGTYRLFNTRANKGDFKVQFVDQ-----SDAAALDAALAKK------PKLILLETPSNPLVRVVDIAELCQKAK 165 (388)
T ss_pred EcCCchHHHHHHHHHHHhcCCeEEEEECC-----CCHHHHHHhcCcC------CeEEEEECCCCCCCcccCHHHHHHHHH
Confidence 7777776544432 234566666642 5789999888654 348888899999999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~ 759 (764)
++|++++||.||+.+....|- . + .||-++.+.|||++.|-+
T Consensus 166 ~~gi~vIvDea~~~~~~~~pl-~-----~-GaDivv~S~tK~l~G~~d 206 (388)
T PRK08861 166 AVGALVAVDNTFLTPVLQKPL-E-----L-GADFVIHSTTKYINGHSD 206 (388)
T ss_pred HcCCEEEEECCccccccCCCc-c-----c-CCCEEEeecceeccCCCc
Confidence 999999999999876543221 1 1 479999999999998865
No 195
>PLN02242 methionine gamma-lyase
Probab=98.84 E-value=5.9e-08 Score=109.96 Aligned_cols=152 Identities=16% Similarity=0.102 Sum_probs=108.0
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|...++|+ .+++++|.+. .++|+||++|+..++.+... +...|+
T Consensus 74 ~~Pt~~~LE~----~lA~l~g~~~-----------~l~~~sG~~Ai~~al~al~~-------------------~GD~Vl 119 (418)
T PLN02242 74 FNPTVLNLGR----QMAALEGTEA-----------AYCTASGMSAISSVLLQLCS-------------------SGGHVV 119 (418)
T ss_pred CChhHHHHHH----HHHHHhCCCe-----------EEEEccHHHHHHHHHHHHhC-------------------CCCEEE
Confidence 4566666665 6677777754 57899999999888765421 112456
Q ss_pred ecCCcchhHHHHH-----HhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHH
Q psy13453 636 TSDQSNSSVEKSA-----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPIC 710 (764)
Q Consensus 636 ~S~~aH~Sv~kAa-----~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~ 710 (764)
++...+......+ +..|+.++.++.+ |+++|+++|++. .+-+|+....++.+|.+-|+++|+++|
T Consensus 120 ~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~-----d~e~l~~~i~~~-----~tklV~lesp~NPtG~v~dl~~I~~la 189 (418)
T PLN02242 120 ASNTLYGGTHALLAHFLPRKCNITTTFVDIT-----DLEAVKKAVVPG-----KTKVLYFESISNPTLTVADIPELARIA 189 (418)
T ss_pred EcCCcHHHHHHHHHHhhhhccCceEEEcCCC-----CHHHHHHhcCcC-----CCEEEEEecCCCCCCcccCHHHHHHHH
Confidence 6666544443332 3467776666543 799999988542 244777888889999999999999999
Q ss_pred HhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC
Q psy13453 711 QEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 711 ~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~ 759 (764)
++||+|++||.||+. ..+.+. . -| +|.+..+++|+++.+-.
T Consensus 190 ~~~gi~livDea~~~-~~~~~~-~---~g---~divv~S~SK~l~g~g~ 230 (418)
T PLN02242 190 HEKGVTVVVDNTFAP-MVLSPA-R---LG---ADVVVHSISKFISGGAD 230 (418)
T ss_pred HHhCCEEEEECCCCc-cCCCHH-H---cC---CcEEEEeCccccCCCCC
Confidence 999999999999964 333221 1 13 69999999999987654
No 196
>PRK07324 transaminase; Validated
Probab=98.84 E-value=4.6e-08 Score=109.08 Aligned_cols=141 Identities=11% Similarity=-0.002 Sum_probs=100.4
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCC--CCccc
Q psy13453 590 GGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLR 667 (764)
Q Consensus 590 ~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md 667 (764)
..++|+|+++++..++.+.. . +.-.|+++.-++.+....++..|.+++.+|++. .+.+|
T Consensus 82 ~vi~t~G~~~al~~~~~~l~----~---------------~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d 142 (373)
T PRK07324 82 NILQTNGATGANFLVLYALV----E---------------PGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPD 142 (373)
T ss_pred hEEEcCChHHHHHHHHHHhC----C---------------CCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCC
Confidence 57899999999888776431 1 112466677788888888899999999999974 34689
Q ss_pred HHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCccc
Q psy13453 668 GDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVD 744 (764)
Q Consensus 668 ~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aD 744 (764)
+++|++.+.+. +-+|+.+..++.||.+-+ +++|+++|++||+|+++|.+|..... .++......-.++ .
T Consensus 143 ~~~l~~~~~~~------~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~-~~~~~s~~~~~~~-~ 214 (373)
T PRK07324 143 LDELRRLVRPN------TKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDE-DGSTPSIADLYEK-G 214 (373)
T ss_pred HHHHHHhCCCC------CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccc-CCCCCChhhccCC-E
Confidence 99998887543 337788899999998877 89999999999999999999976322 1111111111111 1
Q ss_pred EEEEcCCccCCCC
Q psy13453 745 SFDFNTHKWLLVN 757 (764)
Q Consensus 745 Sit~d~HK~l~~P 757 (764)
-..-++.|.++.|
T Consensus 215 I~~~s~SK~~~~~ 227 (373)
T PRK07324 215 ISTNSMSKTYSLP 227 (373)
T ss_pred EEEecchhhcCCc
Confidence 2334888988754
No 197
>PRK09028 cystathionine beta-lyase; Provisional
Probab=98.83 E-value=4.2e-08 Score=110.21 Aligned_cols=149 Identities=13% Similarity=0.091 Sum_probs=105.9
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEe
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT 636 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~ 636 (764)
.|....+|+. ++++.|.. ..++++||++|+..++.+. .+ +...|++
T Consensus 60 npt~~~Le~~----iA~le~~~-----------~~~~~~sG~~Ai~~~l~al----l~---------------~GD~Vvv 105 (394)
T PRK09028 60 TPTHFAFQAA----IVELEGGA-----------GTALYPSGAAAISNALLSF----LK---------------AGDHLLM 105 (394)
T ss_pred CchHHHHHHH----HHHHhCCC-----------cEEEECCHHHHHHHHHHHH----hC---------------CCCEEEE
Confidence 5655666654 44544432 3689999999987776543 11 1124666
Q ss_pred cCCcchhHHHH----HHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh
Q psy13453 637 SDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE 712 (764)
Q Consensus 637 S~~aH~Sv~kA----a~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~ 712 (764)
++..+...... ....|+.++.++.+ +.+.|+++|++. +-+|+++..++.+|.+.||++|+++|++
T Consensus 106 ~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~-----~~e~l~~~l~~~------TklV~lespsNPtg~v~dl~~I~~la~~ 174 (394)
T PRK09028 106 VDSCYEPTRDLCDKILKGFGIETTYYDPM-----IGEGIRELIRPN------TKVLFLESPGSITMEVQDVPTLSRIAHE 174 (394)
T ss_pred ECCCcHHHHHHHHHhhhhcceEEEEECCC-----CHHHHHHhcCcC------ceEEEEECCCCCCCcHHHHHHHHHHHHH
Confidence 66666555442 33467777776543 357788777543 4488889999999999999999999999
Q ss_pred cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 713 YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 713 ~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+|+|+.||.+|+.+...-|. . - .||-+..+.|||++.+
T Consensus 175 ~g~~lvvD~t~a~p~~~~Pl-~---~---GaDivv~S~tK~l~Gh 212 (394)
T PRK09028 175 HDIVVMLDNTWASPINSRPF-E---M---GVDISIQAATKYIVGH 212 (394)
T ss_pred cCCEEEEECCccccccCCcc-c---c---CceEEEEeCCeEecCC
Confidence 99999999999986543331 1 1 4699999999999988
No 198
>PRK08114 cystathionine beta-lyase; Provisional
Probab=98.83 E-value=4.4e-08 Score=109.87 Aligned_cols=157 Identities=11% Similarity=0.068 Sum_probs=116.2
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEE
Q psy13453 555 LSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVA 634 (764)
Q Consensus 555 ~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi 634 (764)
...|-...+|+. +++|-|.. ..+++++|+.|+..++.+. +. +...|
T Consensus 59 ~~nPt~~~le~~----la~LEg~~-----------~a~~~~SGmaAi~~~~~~l----l~---------------~GD~V 104 (395)
T PRK08114 59 RGTLTHFSLQEA----MCELEGGA-----------GCALYPCGAAAVANAILAF----VE---------------QGDHV 104 (395)
T ss_pred CCChhHHHHHHH----HHHHhCCC-----------eEEEEhHHHHHHHHHHHHH----cC---------------CCCEE
Confidence 356777788874 45554432 4678888999887766533 11 12257
Q ss_pred EecCCcchhHHHHH----HhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHH
Q psy13453 635 YTSDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPIC 710 (764)
Q Consensus 635 ~~S~~aH~Sv~kAa----~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~ 710 (764)
+++...|....+.+ ...|++++.++. .|.++++++|++++ -+|.+...++.+|.+-||++|+++|
T Consensus 105 v~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~-----~d~~~l~~~l~~~T------rlV~~EtpsNp~~~v~DI~~Ia~ia 173 (395)
T PRK08114 105 LMTGTAYEPTQDFCSKILSKLGVTTTWFDP-----LIGADIAKLIQPNT------KVVFLESPGSITMEVHDVPAIVAAV 173 (395)
T ss_pred EEeCCCcHHHHHHHHHHHHhcCcEEEEECC-----CCHHHHHHhcCCCc------eEEEEECCCCCCCEeecHHHHHHHH
Confidence 78888887766554 447899888774 36788999987643 4889999999999999999999999
Q ss_pred HhcC--CEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc--Cceee
Q psy13453 711 QEYN--IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF--DCSAM 763 (764)
Q Consensus 711 ~~~g--lwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~--~~g~l 763 (764)
+++| +.+.||++|+.+.+ +...++ .||-+..+.|||++.+- .+|++
T Consensus 174 ~~~g~g~~lvVDnT~a~p~~-~~pl~~------GaDivv~S~tKyl~Ghsdv~~G~v 223 (395)
T PRK08114 174 RSVNPDAVIMIDNTWAAGVL-FKALDF------GIDISIQAGTKYLVGHSDAMIGTA 223 (395)
T ss_pred HHhCCCCEEEEECCCccccc-cCHHHc------CCcEEEEcCcccccCCCcceeEEE
Confidence 9985 99999999998765 322222 36999999999999994 45543
No 199
>PRK07682 hypothetical protein; Validated
Probab=98.83 E-value=1.4e-07 Score=105.13 Aligned_cols=174 Identities=15% Similarity=0.106 Sum_probs=122.8
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 552 FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 552 ~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
..|...+....+.+.+.+|+.+.+|++-+ .....++|+|+++++..++.+.. . ++
T Consensus 51 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~------~~~~i~~t~G~~~al~~~~~~l~----~---------------~g 105 (378)
T PRK07682 51 TSYTANAGLLELRQEIAKYLKKRFAVSYD------PNDEIIVTVGASQALDVAMRAII----N---------------PG 105 (378)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCC------CCCcEEEeCChHHHHHHHHHHhC----C---------------CC
Confidence 33555566778888899999988787421 01257899999998876654321 1 12
Q ss_pred eEEEecCCcchhHHHHHHhCCCceEEEecC--CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHH
Q psy13453 632 LVAYTSDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEEL 706 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d--~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eI 706 (764)
..|++.+-++.....++...|.+++.++.+ +++.+|+++|++++.+. +-+|+.+..++.+|.+ +++++|
T Consensus 106 d~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~NPtG~~~s~~~~~~l 179 (378)
T PRK07682 106 DEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAK------TKAILLCSPNNPTGAVLNKSELEEI 179 (378)
T ss_pred CEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcc------cEEEEEECCCCCcCcCcCHHHHHHH
Confidence 246777888888888888899998889875 35789999999988543 3366667788999988 468999
Q ss_pred HHHHHhcCCEEEEeccccccccccchhh--hhhcCCCcccEEEEcCCccCCCC
Q psy13453 707 GPICQEYNIWLHVDAAYAGSALLLPEYA--HLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 707 a~i~~~~glwLHVDaA~Gg~~l~~~~~r--~~l~gie~aDSit~d~HK~l~~P 757 (764)
+++|++|++|+++|.+|+....- +... ..+.+...-.-+.-++.|.++.|
T Consensus 180 ~~~~~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 231 (378)
T PRK07682 180 AVIVEKHDLIVLSDEIYAELTYD-EAYTSFASIKGMRERTILISGFSKGFAMT 231 (378)
T ss_pred HHHHHHcCcEEEEehhhhhcccC-CCCCChhhcccccCCEEEEecCcccccCh
Confidence 99999999999999999875431 1111 11122212245677889998754
No 200
>PRK07550 hypothetical protein; Provisional
Probab=98.82 E-value=1.8e-07 Score=104.62 Aligned_cols=179 Identities=12% Similarity=-0.033 Sum_probs=119.6
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCce
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKL 632 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~ 632 (764)
.|...+...++.+.+.+++.+..|..-. ....++|+|+++++.+++.+.. . ++.
T Consensus 62 ~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-------~~~i~~t~G~~~al~~~~~~l~----~---------------~gd 115 (386)
T PRK07550 62 LYGPVEGLPELREAYAAHYSRLYGAAIS-------PEQVHITSGCNQAFWAAMVTLA----G---------------AGD 115 (386)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCC-------cceEEEecCcHHHHHHHHHHhc----C---------------CCC
Confidence 3444456788888899999888775432 1357889999998766654421 1 122
Q ss_pred EEEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc---cHHHHH
Q psy13453 633 VAYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD---NLEELG 707 (764)
Q Consensus 633 vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD---pl~eIa 707 (764)
.|++.+-++......++..|++++.|+.++ .+.+|+++|++.+++. +.+|+.+..++.+|.+- .+++|+
T Consensus 116 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~------~~~v~~~~P~NPtG~~~~~~~~~~i~ 189 (386)
T PRK07550 116 EVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPR------TRAIALVTPNNPTGVVYPPELLHELY 189 (386)
T ss_pred EEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhccc------CcEEEEeCCCCCCCcccCHHHHHHHH
Confidence 467777777667777788999999999974 4568999999998653 33555666788899875 488999
Q ss_pred HHHHhcCCEEEEeccccccccccchhhhhhcCCC-ccc-EEEEcCCccCCCC-cCceee
Q psy13453 708 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE-YVD-SFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 708 ~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie-~aD-Sit~d~HK~l~~P-~~~g~l 763 (764)
++|++||+|+++|.+|+....-.......+.... ..+ -...+++|.++.| +.+|++
T Consensus 190 ~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i 248 (386)
T PRK07550 190 DLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAV 248 (386)
T ss_pred HHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEee
Confidence 9999999999999999864211000001111110 111 2367999988744 334543
No 201
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=98.82 E-value=7.1e-08 Score=108.84 Aligned_cols=152 Identities=8% Similarity=-0.031 Sum_probs=111.0
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEE
Q psy13453 555 LSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVA 634 (764)
Q Consensus 555 ~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi 634 (764)
...|....+|+ .++++.|.+ ..+++++|+.|+..++.+.. . +...|
T Consensus 67 ~~~p~~~~le~----~lA~l~g~~-----------~al~~~sG~~Ai~~~l~all----~---------------~Gd~V 112 (403)
T PRK07810 67 YGNPTVSMFEE----RLRLIEGAE-----------ACFATASGMSAVFTALGALL----G---------------AGDRL 112 (403)
T ss_pred CCCchHHHHHH----HHHHHhCCC-----------cEEEECChHHHHHHHHHHHh----C---------------CCCEE
Confidence 35566666666 567777754 36899999999887665431 1 11246
Q ss_pred EecCCcch----hHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHH
Q psy13453 635 YTSDQSNS----SVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPIC 710 (764)
Q Consensus 635 ~~S~~aH~----Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~ 710 (764)
+++...|. ...+.+...|+.++.++.+ |+++++++|++.+ -+|++...++.+|.+-|+++|+++|
T Consensus 113 l~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~ai~~~t------klV~~esp~Nptg~v~dl~~I~~la 181 (403)
T PRK07810 113 VAARSLFGSCFVVCNEILPRWGVETVFVDGE-----DLSQWEEALSVPT------QAVFFETPSNPMQSLVDIAAVSELA 181 (403)
T ss_pred EEccCCcchHHHHHHHHHHHcCcEEEEECCC-----CHHHHHHhcCcCc------eEEEEECCCCCCCeecCHHHHHHHH
Confidence 67766552 2344566689998888753 8999999987643 3788888999999999999999999
Q ss_pred HhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc
Q psy13453 711 QEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 711 ~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~ 758 (764)
+++|+++.||.||+.....-+. -. .+|-+..++||+++.+-
T Consensus 182 ~~~g~~vivD~a~a~~~~~~~~----~~---gaDivv~S~tK~l~g~g 222 (403)
T PRK07810 182 HAAGAKVVLDNVFATPLLQRGL----PL---GADVVVYSGTKHIDGQG 222 (403)
T ss_pred HHcCCEEEEECCCCccccCChh----hc---CCcEEEccCCceecCCc
Confidence 9999999999999865443221 11 36999999999998643
No 202
>PRK06207 aspartate aminotransferase; Provisional
Probab=98.82 E-value=2e-07 Score=105.07 Aligned_cols=172 Identities=13% Similarity=0.089 Sum_probs=121.6
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCC-CcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGP-GGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~-~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
.|........+-+.+.+|+++.+|++-+ . ...++|+|+++++..++.+.. . +.
T Consensus 73 ~Y~~~~G~~~LR~aia~~l~~~~g~~~~-------~~~~I~it~Ga~~al~~~~~~l~----~---------------~G 126 (405)
T PRK06207 73 AYTEYRGDADIRELLAARLAAFTGAPVD-------AADELIITPGTQGALFLAVAATV----A---------------RG 126 (405)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHhCCCCC-------CCCCEEEeCCcHHHHHHHHHHhc----C---------------CC
Confidence 4544455677888899999999997532 1 357899999998766655321 1 12
Q ss_pred eEEEecCCcchhHHHHHHhCCCceEEEecC-----CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---H
Q psy13453 632 LVAYTSDQSNSSVEKSAIIGDVPVRQLRSD-----DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---L 703 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d-----~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l 703 (764)
..|++..-++......+...|.+++.||++ +++.+|+++|++++++. +-+|+.+..++.||.+-+ +
T Consensus 127 d~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~------~k~v~l~~P~NPTG~~~s~e~l 200 (405)
T PRK06207 127 DKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAG------VRVFLFSNPNNPAGVVYSAEEI 200 (405)
T ss_pred CEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhc------CeEEEECCCCCCCCcCCCHHHH
Confidence 246667778888888899999999999986 35789999999988653 236777888999999865 7
Q ss_pred HHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCC--ccc-EEEEcCCccCCCC
Q psy13453 704 EELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE--YVD-SFDFNTHKWLLVN 757 (764)
Q Consensus 704 ~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie--~aD-Sit~d~HK~l~~P 757 (764)
++|+++|++||+|+.+|.+|+-...-...+.. +..+. .-. -+.-++.|.++.|
T Consensus 201 ~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~-~~~~~~~~~~vi~i~SfSK~~~lp 256 (405)
T PRK06207 201 AQIAALARRYGATVIVDQLYSRLLYDGTSYTH-LRALPIDPENVITIMGPSKTESLS 256 (405)
T ss_pred HHHHHHHHHcCCEEEEeccccccccCCCCCCc-hhcCCCCcCcEEEEecchhhccCc
Confidence 77888999999999999999864321111111 11110 111 4567889988866
No 203
>PRK05942 aspartate aminotransferase; Provisional
Probab=98.80 E-value=1.7e-07 Score=105.16 Aligned_cols=180 Identities=12% Similarity=0.103 Sum_probs=119.3
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCce
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKL 632 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~ 632 (764)
.|........+.+.+.+|+.+.+|.+-+ .....++|+|++++...++.+. .. +..
T Consensus 68 ~Y~~~~G~~~lr~aia~~~~~~~~~~~~------~~~~i~vt~G~~~al~~~~~~~----~~---------------~gd 122 (394)
T PRK05942 68 GYPPFEGTASFRQAITDWYHRRYGVELD------PDSEALPLLGSKEGLTHLALAY----VN---------------PGD 122 (394)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHCCCcC------CCCeEEEccChHHHHHHHHHHh----CC---------------CCC
Confidence 3443334567888889999888776432 0013667899999876665432 11 122
Q ss_pred EEEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHHH
Q psy13453 633 VAYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEELG 707 (764)
Q Consensus 633 vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eIa 707 (764)
.|++++-++.....++...|++++.||+|. ++.+|+++|++.+.+. +-+|+.+..++.||.+-+ +++|.
T Consensus 123 ~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~P~NPtG~~~s~~~~~~i~ 196 (394)
T PRK05942 123 VVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQ------AKILYFNYPSNPTTATAPREFFEEIV 196 (394)
T ss_pred EEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhcccc------ceEEEEcCCCCCCCCcCCHHHHHHHH
Confidence 477778888888888888999999999974 3579999999988643 336666778999999976 88899
Q ss_pred HHHHhcCCEEEEeccccccccccchhhh--hhcCCCcccEEEEcCCccCCC-CcCceee
Q psy13453 708 PICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFDFNTHKWLLV-NFDCSAM 763 (764)
Q Consensus 708 ~i~~~~glwLHVDaA~Gg~~l~~~~~r~--~l~gie~aDSit~d~HK~l~~-P~~~g~l 763 (764)
++|++||+|+++|.+|+-...-..+... .+.+.....-..-++-|.++. ..-+|.+
T Consensus 197 ~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i 255 (394)
T PRK05942 197 AFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFV 255 (394)
T ss_pred HHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeee
Confidence 9999999999999999854321100000 011111112234567797753 3445654
No 204
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=98.80 E-value=7.5e-08 Score=108.71 Aligned_cols=152 Identities=16% Similarity=0.134 Sum_probs=105.2
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|....+| +.++++.|.+ ..+++++|++++.+++.+. .. +...|+
T Consensus 58 ~~p~~~~Le----~~lA~l~g~~-----------~~v~~~sG~~Ai~~~l~al----l~---------------pGD~Vv 103 (405)
T PRK08776 58 GNPTRDLLG----EALAELEGGA-----------GGVITATGMGAINLVLNAL----LQ---------------PGDTLV 103 (405)
T ss_pred CChHHHHHH----HHHHHHhCCC-----------ceEEEcCHHHHHHHHHHHH----hC---------------CCCEEE
Confidence 344555555 5777777753 3588888888776555432 11 112355
Q ss_pred ecCCcchh----HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSS----VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~S----v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...+.. +...+...|+.++.++. .|+++|++++++. +-+|+....++.+|.+.|+++|+++|+
T Consensus 104 v~~p~Y~~t~~~~~~~~~~~g~~v~~v~~-----~d~~~l~~~i~~~------tklV~l~~P~NPtG~v~dl~~I~~la~ 172 (405)
T PRK08776 104 VPHDAYGGSWRLFNALAKKGHFALITADL-----TDPRSLADALAQS------PKLVLIETPSNPLLRITDLRFVIEAAH 172 (405)
T ss_pred EccCCchHHHHHHHHHHHhcCcEEEEECC-----CCHHHHHHhcCcC------CeEEEEECCCCCCCccCCHHHHHHHHH
Confidence 66666654 23334556777777764 3789999888543 347777888899999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~ 759 (764)
++|+++.||.+|+......| . . -.||-+..++||+++.|-+
T Consensus 173 ~~gi~vIvD~a~a~~~~~~p----l-~--~gaDivv~S~tK~l~g~~~ 213 (405)
T PRK08776 173 KVGALTVVDNTFLSPALQKP----L-E--FGADLVLHSTTKYINGHSD 213 (405)
T ss_pred HcCCEEEEECCCcccccCCc----c-c--ccCCEEEecCceeecCCCC
Confidence 99999999999986432211 1 1 1469999999999998754
No 205
>PRK06234 methionine gamma-lyase; Provisional
Probab=98.80 E-value=1e-07 Score=107.40 Aligned_cols=156 Identities=17% Similarity=0.159 Sum_probs=112.0
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|...++|+. ++++.|.+ ..++++||+.|+..++.+.. . +...|+
T Consensus 62 ~~p~~~~Le~~----iA~~~g~~-----------~~l~~~sG~~Ai~~al~~ll----~---------------~Gd~Vl 107 (400)
T PRK06234 62 GNPTSTEVENK----LALLEGGE-----------AAVVAASGMGAISSSLWSAL----K---------------AGDHVV 107 (400)
T ss_pred CCccHHHHHHH----HHHHhCCC-----------cEEEEcCHHHHHHHHHHHHh----C---------------CCCEEE
Confidence 56777777774 45555643 35889999999877665321 1 112466
Q ss_pred ecCCcchhH----HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSSV----EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~Sv----~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...|.+. ...+...|++++.++.+ |+++++++|++. +-+|+....++.+|.+-|+++|+++|+
T Consensus 108 ~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-----d~e~l~~~i~~~------tklI~iesP~NPtG~v~dl~~I~~la~ 176 (400)
T PRK06234 108 ASDTLYGCTFALLNHGLTRYGVEVTFVDTS-----NLEEVRNALKAN------TKVVYLETPANPTLKVTDIKAISNIAH 176 (400)
T ss_pred EecCccchHHHHHHHHHhhCCeEEEEECCC-----CHHHHHHHhccC------CeEEEEECCCCCCCCcCCHHHHHHHHH
Confidence 677666443 34456788888888764 799999998654 337888889999999999999999999
Q ss_pred hc--CCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC--ceee
Q psy13453 712 EY--NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD--CSAM 763 (764)
Q Consensus 712 ~~--glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~--~g~l 763 (764)
++ |+++.||.+|+.+....+ . +. .+|-+..+++|+++.+-. .|++
T Consensus 177 ~~~~~i~livDea~~~~~~~~~----l--~~-g~Divv~S~sK~l~g~g~~~gG~v 225 (400)
T PRK06234 177 ENNKECLVFVDNTFCTPYIQRP----L--QL-GADVVVHSATKYLNGHGDVIAGFV 225 (400)
T ss_pred hcCCCCEEEEECCCCchhcCCc----h--hh-CCcEEEeeccccccCCCCceeEEE
Confidence 97 999999999987644322 1 11 469999999999987653 3543
No 206
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=98.79 E-value=1.4e-07 Score=105.42 Aligned_cols=216 Identities=11% Similarity=0.031 Sum_probs=139.3
Q ss_pred eeeeH----HHHHhhcCCCCCCeEEecCCC-CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc----
Q psy13453 20 LIYES----FKATHSLSGTPDQVRLSGLPD-SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS---- 90 (764)
Q Consensus 20 ~~YSv----~KAa~~LGl~~~~v~~Vpvd~-~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~---- 90 (764)
.|+|. .++++..|+.. +.+|+++ ++.+|+++|+++|+++ +.+++-+.+++++|.+.|+++|++
T Consensus 113 ~~~s~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~l~~~i~~~-----~~lv~i~~~~n~tG~~~~~~~i~~~~~~ 184 (397)
T TIGR01976 113 DHEANISPWLQAAERAGAKV---KWARVDEATGELHPDDLASLLSPR-----TRLVAVTAASNTLGSIVDLAAITELVHA 184 (397)
T ss_pred chHhHHHHHHHHHHhcCCEE---EEEeccccCCCcCHHHHHHhcCCC-----ceEEEEeCCCCCCCccCCHHHHHHHHHH
Confidence 45554 46778889877 8999985 7899999999999642 234567889999999999999876
Q ss_pred -CCCceeccccccc--------------------c----ceeeeecCCCccccc--cccccccCC--ccc-CCCCcc-cH
Q psy13453 91 -NGPLKVGGVLRRV--------------------Y----SSCLVPRGQKSLRTT--VLFHFLFQH--WQI-PLGRRF-RA 139 (764)
Q Consensus 91 -~~wlHVDa~l~~~--------------------y----~s~ll~rd~~~l~~~--~s~~~d~~d--~tl-e~SRr~-~A 139 (764)
+++++||++.... + .++++.++. .+... +...+.+.. ..+ .|++.. ..
T Consensus 185 ~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~G~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~ 263 (397)
T TIGR01976 185 AGALVVVDAVHYAPHGLIDVQATGADFLTCSAYKFFGPHMGILWGRPE-LLMNLPPYKLTFSYDTGPERFELGTPQYELL 263 (397)
T ss_pred cCCEEEEehhhhccccCCCHHHcCCCEEEEechhhcCCceEEEEEcHH-HHhhCCCccccCccCCCcchhcCCCCCHHHH
Confidence 7899999954211 0 123332221 11000 000011100 001 133332 33
Q ss_pred HHHHHHHHHccHH--------------HHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC----CCceeEEEEeeccccccc
Q psy13453 140 LKLWMTLRSYGLK--------------GLQAYLRKHISLAKKFADLVEQDDRFELVCP----PSMGLVCFRLKVRFWDKL 201 (764)
Q Consensus 140 LklWatL~~lG~e--------------Gy~~~i~~~i~lA~~l~~~I~~~p~~ell~~----P~l~iV~Fry~P~~~~~~ 201 (764)
+.++++++.+-.. ++.+..++..++++++.+.|++.++++++.+ +..+++.|+..
T Consensus 264 ~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~------- 336 (397)
T TIGR01976 264 AGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVH------- 336 (397)
T ss_pred HHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeC-------
Confidence 4667777766333 3677788889999999999999988999875 35778888642
Q ss_pred cccccCccCCccHHHHHHHHHHHhcCcEEEEece----------e-CCeeEEEEeccCCCCCHHHHHHHHHHH
Q psy13453 202 DNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGS----------F-QDRLFMRFAICSSQTEESDVQLGWNEI 263 (764)
Q Consensus 202 ~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~----------l-~g~~~LRi~v~np~Tt~e~i~~~l~~l 263 (764)
+.+ ...+.++|.+.|....+... + .....+|+++.. .+++++++.+++.|
T Consensus 337 ---------~~~--~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~t~~di~~l~~~l 397 (397)
T TIGR01976 337 ---------GLP--PQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAH-YNTAEEVDRLLEAL 397 (397)
T ss_pred ---------CcC--HHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeec-cCCHHHHHHHHHhC
Confidence 111 24688888888876543311 1 123579997554 67899999998753
No 207
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=98.78 E-value=1.8e-07 Score=106.34 Aligned_cols=142 Identities=9% Similarity=0.089 Sum_probs=105.3
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 554 WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
|.......++.+.+.+++.+-.|++-+ ....++|+|+|+++.+++.+.. . +...
T Consensus 90 Y~~~~G~~~lr~aia~~~~~~~~~~~~-------~~~v~it~G~~~al~l~~~~l~----~---------------~Gd~ 143 (430)
T PLN00145 90 YSTCVGLLPARRAIAEYLSRDLPYELS-------TDDIYLTAGCAQAIEIIMSVLA----Q---------------PGAN 143 (430)
T ss_pred CCCCccCHHHHHHHHHHHhhccCCCCC-------hhhEEEeCCHHHHHHHHHHHhc----C---------------CCCE
Confidence 444445566777777777766555321 2468999999999877665421 1 1124
Q ss_pred EEecCCcchhHHHHHHhCCCceEEEecC--CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHHHH
Q psy13453 634 AYTSDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEELGP 708 (764)
Q Consensus 634 i~~S~~aH~Sv~kAa~~lGl~v~~Vp~d--~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eIa~ 708 (764)
|++++-++......+...|++++.+++. +++.+|+++|++.+.+. +.+++.+..++.+|.+-+ +++|++
T Consensus 144 Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~i~~P~NPtG~v~~~~~l~~i~~ 217 (430)
T PLN00145 144 ILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADEN------TVAMVIINPNNPCGSVYSYEHLAKIAE 217 (430)
T ss_pred EEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcC------ceEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 6667777777777888899999988864 46789999999887653 347777888999999977 888888
Q ss_pred HHHhcCCEEEEeccccccc
Q psy13453 709 ICQEYNIWLHVDAAYAGSA 727 (764)
Q Consensus 709 i~~~~glwLHVDaA~Gg~~ 727 (764)
+|++||+|+++|.+|+...
T Consensus 218 ~a~~~~i~ii~De~Y~~~~ 236 (430)
T PLN00145 218 TARKLGILVIADEVYDHLT 236 (430)
T ss_pred HHHHcCCEEEEeccchhhc
Confidence 9999999999999998643
No 208
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=98.78 E-value=1.4e-07 Score=103.96 Aligned_cols=181 Identities=21% Similarity=0.234 Sum_probs=128.6
Q ss_pred CccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCc-EEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCcccccc
Q psy13453 551 GFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGG-GIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIR 629 (764)
Q Consensus 551 ~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~-GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~ 629 (764)
...|........+++.+.+|+.+--|++.+ .. .+++++|+.+++..+..+.. ..
T Consensus 37 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~--------~~~~i~~~~G~~~~~~~~~~~~~---~~-------------- 91 (363)
T PF00155_consen 37 FLGYPPPQGYPELREAIADFLGRRYGVPVD--------PEANILVTSGAQAALFLLLRLLK---IN-------------- 91 (363)
T ss_dssp CTSSTCTTHHHHHHHHHHHHHHHHHTHHTT--------GGEGEEEESHHHHHHHHHHHHHH---SS--------------
T ss_pred cccCCCchhhHHHHHHHHHHhhhccCcccc--------cceEEEEecccccchhhhhhccc---cc--------------
Confidence 445566666788999888888866665443 23 45555666665555443321 00
Q ss_pred CceEEEecCCcchhHHHHHHhCCCceEEEecC--CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHH
Q psy13453 630 NKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLE 704 (764)
Q Consensus 630 ~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d--~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~ 704 (764)
++..|++.+-+|.....+++..|+.++.+|.+ +++.+|+++|++.+++...++..+.+|+.+..++.||.+ +.+.
T Consensus 92 ~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~ 171 (363)
T PF00155_consen 92 PGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELR 171 (363)
T ss_dssp TTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHH
T ss_pred ccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccccccccccccc
Confidence 12358888999999999999999999999965 788999999999999876665445677778888899987 4555
Q ss_pred HHHHHHHhcCCEEEEeccccccccccchh---hhhhcCCCcccEEEEcCCccCCCC
Q psy13453 705 ELGPICQEYNIWLHVDAAYAGSALLLPEY---AHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 705 eIa~i~~~~glwLHVDaA~Gg~~l~~~~~---r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+|+++|++||+|+.+|-+|+....-.+.. ...+..-.. --+.-++.|.++.|
T Consensus 172 ~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~-vi~~~S~SK~~g~~ 226 (363)
T PF00155_consen 172 ELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDN-VIVVGSLSKSFGLP 226 (363)
T ss_dssp HHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTST-EEEEEESTTTTTSG
T ss_pred chhhhhcccccceeeeeceeccccCCCccCccccccccccc-ceeeeecccccccc
Confidence 66666999999999999999876553322 122222111 36888999988766
No 209
>PRK07671 cystathionine beta-lyase; Provisional
Probab=98.78 E-value=1.1e-07 Score=106.39 Aligned_cols=151 Identities=12% Similarity=0.103 Sum_probs=104.6
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|....+|+ .++++.|.+. .+++++|+.++..++. ... +.-.|+
T Consensus 48 ~~p~~~~Le~----~lA~l~g~~~-----------~~~~~sG~aai~~~~~-----~l~---------------~Gd~Vi 92 (377)
T PRK07671 48 GNPTRAALEE----LIAVLEGGHA-----------GFAFGSGMAAITAVMM-----LFS---------------SGDHVI 92 (377)
T ss_pred CChHHHHHHH----HHHHHhCCCc-----------eEEeCCHHHHHHHHHH-----HhC---------------CCCEEE
Confidence 3455555554 6788887643 4777878765543321 111 112466
Q ss_pred ecCCcchhHHH----HHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSSVEK----SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~Sv~k----Aa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...|.+..+ .+...|+.++.++. .|+++++++|+++. -+|++...++.+|.+.|+++|+++|+
T Consensus 93 v~~~~y~~~~~~~~~~~~~~G~~v~~v~~-----~d~~~l~~ai~~~t------klV~le~P~NPtg~~~dl~~I~~la~ 161 (377)
T PRK07671 93 LTDDVYGGTYRVMTKVLNRFGIEHTFVDT-----SNLEEVEEAIRPNT------KAIYVETPTNPLLKITDIKKISTIAK 161 (377)
T ss_pred ECCCccchHHHHHHHHHhcCCeEEEEECC-----CCHHHHHHhcCCCC------eEEEEECCCCCCCcccCHHHHHHHHH
Confidence 77776654333 34457888888764 37999999986543 37788888899999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~ 759 (764)
++|++++||.+|+......+ .- ..+|.++.+++||++.|-+
T Consensus 162 ~~g~~lvvD~a~~~~~~~~p----~~---~g~Divv~S~sK~l~G~~~ 202 (377)
T PRK07671 162 EKGLLTIVDNTFMTPYWQSP----IS---LGADIVLHSATKYLGGHSD 202 (377)
T ss_pred HcCCEEEEECCCCccccCCh----hh---hCCeEEEecCcccccCCcc
Confidence 99999999999986433221 11 1469999999999998753
No 210
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=98.77 E-value=2.3e-07 Score=102.66 Aligned_cols=172 Identities=15% Similarity=0.066 Sum_probs=129.2
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEE
Q psy13453 555 LSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVA 634 (764)
Q Consensus 555 ~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi 634 (764)
..+|.+..+-+++++.|..+|+-... ..-+++++||.+.-.++. ...+ |...+
T Consensus 31 h~s~~F~~~~~~~~~~L~~v~~t~~~--------~~~ll~gsGt~amEAav~----sl~~---------------pgdkV 83 (383)
T COG0075 31 HRSPDFVGIMKEVLEKLRKVFGTENG--------DVVLLSGSGTLAMEAAVA----SLVE---------------PGDKV 83 (383)
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCC--------cEEEEcCCcHHHHHHHHH----hccC---------------CCCeE
Confidence 57899999999999999999997642 134677888876544433 2221 11223
Q ss_pred EecCCcchh--HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh
Q psy13453 635 YTSDQSNSS--VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE 712 (764)
Q Consensus 635 ~~S~~aH~S--v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~ 712 (764)
++....-|. +.+-+...|.+++.+.+...-.+|+++++++|+++.. .-.|..+..-|.||...|+++|+++|++
T Consensus 84 Lv~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~----~~~V~~vH~ETSTGvlnpl~~I~~~~k~ 159 (383)
T COG0075 84 LVVVNGKFGERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPD----IKAVAVVHNETSTGVLNPLKEIAKAAKE 159 (383)
T ss_pred EEEeCChHHHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCC----ccEEEEEeccCcccccCcHHHHHHHHHH
Confidence 334444443 6677888999999999886667999999999985532 3389999999999999999999999999
Q ss_pred cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 713 YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 713 ~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
||..+.|||.-+.+.. +.+..--|+ |-+....+|.+++|.|.|++
T Consensus 160 ~g~l~iVDaVsS~Gg~---~~~vd~wgi---Dv~itgSQK~l~~PPGla~v 204 (383)
T COG0075 160 HGALLIVDAVSSLGGE---PLKVDEWGI---DVAITGSQKALGAPPGLAFV 204 (383)
T ss_pred cCCEEEEEecccCCCc---ccchhhcCc---cEEEecCchhccCCCcccee
Confidence 9999999996432222 222222355 99999999999999999876
No 211
>PRK07683 aminotransferase A; Validated
Probab=98.76 E-value=2.4e-07 Score=103.81 Aligned_cols=187 Identities=14% Similarity=0.085 Sum_probs=126.5
Q ss_pred HHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhcc
Q psy13453 539 VGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQS 618 (764)
Q Consensus 539 lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~ 618 (764)
+.+.+...+..+...|...+....+++.+.+|+.+..|.+-+ .....++|+|+++|+..++.+. ..
T Consensus 46 ~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~------~~~~I~~t~G~~~al~~~~~~l----~~---- 111 (387)
T PRK07683 46 VKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYS------PESEIIVTIGASEAIDIAFRTI----LE---- 111 (387)
T ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC------CCCcEEEeCChHHHHHHHHHHh----CC----
Confidence 344455445444445555566778888899999877776432 1125799999999987665432 11
Q ss_pred CCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCC-CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCc
Q psy13453 619 KNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGT 697 (764)
Q Consensus 619 ~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~-~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~ 697 (764)
++..|+++.-+......++...|.+++.+|.++ ++.+|+++|++.+.+. +-+|+.+..++.+
T Consensus 112 -----------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~i~i~~p~NPt 174 (387)
T PRK07683 112 -----------PGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITEK------TRCVVLPYPSNPT 174 (387)
T ss_pred -----------CCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCcC------ceEEEEeCCCCCC
Confidence 112466666666667778888999999999875 4568999999887543 3366777888999
Q ss_pred ccc---ccHHHHHHHHHhcCCEEEEeccccccccccchhhhh--hcCCCcccEEEEcCCccCCCC
Q psy13453 698 CAF---DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHL--KRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 698 Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~--l~gie~aDSit~d~HK~l~~P 757 (764)
|.+ +++++|+++|+++|+++++|.+|.....- ++.... +.+...-.-+.-++-|.++.|
T Consensus 175 G~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~vi~~~s~SK~~~~p 238 (387)
T PRK07683 175 GVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYE-QPHTSIAHFPEMREKTIVINGLSKSHSMT 238 (387)
T ss_pred CcCCCHHHHHHHHHHHHHcCeEEEEecccccceeC-CCcCChhhccCCcCCeEEEeeccccccCc
Confidence 997 56899999999999999999999865321 111111 111111134467889998866
No 212
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.76 E-value=1.1e-07 Score=108.00 Aligned_cols=151 Identities=13% Similarity=0.019 Sum_probs=103.8
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|....+|+ .++++.|.+ ..+++++|++|+..++.+... + ...|+
T Consensus 56 ~~pt~~~Le~----~lA~l~g~~-----------~~l~~ssG~~Ai~~al~al~~---~----------------Gd~Vl 101 (425)
T PRK06084 56 MNPTNDVLEQ----RVAALEGGV-----------GALAVASGMAAITYAIQTIAE---A----------------GDNIV 101 (425)
T ss_pred CCchHHHHHH----HHHHHhCCC-----------ceeEehhHHHHHHHHHHHHhC---C----------------CCEEE
Confidence 3455555554 667777643 357899999988777764321 0 11345
Q ss_pred ecCCcchhHHHHH----HhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~Sv~kAa----~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...+......+ ...|+.+..++. .|+++|+++|+++. -+|+....++.+|.+-|+++|+++|+
T Consensus 102 ~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~-----~d~e~le~ai~~~t------klV~lesp~NPtG~v~dl~~I~~la~ 170 (425)
T PRK06084 102 SVAKLYGGTYNLLAHTLPRIGIETRFAAH-----DDIAALEALIDERT------KAVFCESIGNPAGNIIDIQALADAAH 170 (425)
T ss_pred EeCCCcchHHHHHHHhcccceeEEEEECC-----CCHHHHHHHhccCC------cEEEEeCCCCCCCeecCHHHHHHHHH
Confidence 5555444333332 224666655543 48999999987643 37777888999999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~ 758 (764)
+||+++.||.+|+.+....| .-. .+|-+..++|||++.+-
T Consensus 171 ~~~i~vVvD~a~a~~~~~~p----~~~---gaDivv~S~tK~l~G~g 210 (425)
T PRK06084 171 RHGVPLIVDNTVATPVLCRP----FEH---GADIVVHSLTKYIGGHG 210 (425)
T ss_pred HcCCEEEEECCCcccccCCh----hhc---CCCEEEECchhcccccc
Confidence 99999999999987654322 111 37999999999998663
No 213
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=98.75 E-value=3.3e-07 Score=103.25 Aligned_cols=159 Identities=11% Similarity=0.041 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
...++-+.+++++|.+. .+|+++|++||..++.+..... ++.+|+++...|.
T Consensus 91 ~~~~le~~la~~~g~~~-----------~~~~~SG~~An~~ai~~l~~~~-----------------~g~~I~~~~~~H~ 142 (406)
T PRK13393 91 YHVLLEAELADLHGKEA-----------ALLFTSGYVSNWAALSTLGSRL-----------------PGCVILSDELNHA 142 (406)
T ss_pred HHHHHHHHHHHHhCCCc-----------EEEeCCcHHHHHHHHHHhhcCC-----------------CCCEEEEccchhH
Confidence 44555578888887643 4666677889998887421110 1226788889999
Q ss_pred hHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEecc
Q psy13453 643 SVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAA 722 (764)
Q Consensus 643 Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA 722 (764)
|+..+++..|..++.++. .|+++|++.++... ...+.+|+....++.+|.+-|+++|.++|++||++++||.|
T Consensus 143 s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~--~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea 215 (406)
T PRK13393 143 SMIEGIRHSRAEKRIFRH-----NDPADLERKLSDLD--PHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEV 215 (406)
T ss_pred HHHHHHHHcCCeEEEeCC-----CCHHHHHHHHHhcc--CCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECC
Confidence 999999888887777664 36888888886431 12355777777888899999999999999999999999999
Q ss_pred ccccccccchhhh--hhcCC-CcccEEEEcCCccCCCC
Q psy13453 723 YAGSALLLPEYAH--LKRGL-EYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 723 ~Gg~~l~~~~~r~--~l~gi-e~aDSit~d~HK~l~~P 757 (764)
|+.+.+ .+.... ...++ +..|-+.-++-|.++.+
T Consensus 216 ~~~g~~-g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~ 252 (406)
T PRK13393 216 HAVGLY-GPRGGGIAEREGLADRLTIIEGTLAKAFGVM 252 (406)
T ss_pred cccccc-CCCCCchhhhcCCCCCCeEEEEeCchhhccc
Confidence 984432 121111 11222 23466666889988754
No 214
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=98.75 E-value=4.6e-07 Score=101.12 Aligned_cols=172 Identities=15% Similarity=0.121 Sum_probs=115.1
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 554 WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
|........+-+.+.+|+.+..|.+.. .....++|+|++++....+.+. .. +...
T Consensus 63 Y~~~~G~~~lr~~ia~~~~~~~~~~~~------~~~~vi~t~G~~~~l~~~~~~~----~~---------------~gd~ 117 (383)
T TIGR03540 63 YPSYEGMLAYRQAVADWYKRRFGVELD------PETEVLSLIGSKEGIAHIPLAF----VN---------------PGDI 117 (383)
T ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCC------CCCeEEECCCcHHHHHHHHHHh----CC---------------CCCE
Confidence 333334466778888888888777432 0123567899999876655432 11 1225
Q ss_pred EEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHHHH
Q psy13453 634 AYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEELGP 708 (764)
Q Consensus 634 i~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eIa~ 708 (764)
|++..-++.....++..+|.+++.+|+++ .+.+|+++|++++.+. +-+|+.+..++.+|.+-+ +++|++
T Consensus 118 vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~------~~~v~i~~P~NPtG~~~~~~~~~~i~~ 191 (383)
T TIGR03540 118 VLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKK------AKLMFINYPNNPTGAVAPLKFFKELVE 191 (383)
T ss_pred EEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcccc------ceEEEEeCCCCCcCccCCHHHHHHHHH
Confidence 77777777777888889999999999974 3568999999988543 336666778899999866 788899
Q ss_pred HHHhcCCEEEEecccccccccc---chhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 709 ICQEYNIWLHVDAAYAGSALLL---PEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 709 i~~~~glwLHVDaA~Gg~~l~~---~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+|++||+|+++|.+|+-...-. +.... +.+...-.-..-++-|.++.|
T Consensus 192 ~a~~~~~~ii~De~y~~l~~~~~~~~~~~~-~~~~~~~~i~~~SfSK~~g~~ 242 (383)
T TIGR03540 192 FAKEYNIIVCHDNAYSEITFDGYKAPSFLE-VDGAKDVGIEFHSLSKTYNMT 242 (383)
T ss_pred HHHHcCEEEEEecchhhhccCCCCCcCccc-CCCcccCEEEEEecccccCCc
Confidence 9999999999999998543211 11111 111111123456777988644
No 215
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=98.75 E-value=4.5e-08 Score=108.38 Aligned_cols=169 Identities=12% Similarity=-0.073 Sum_probs=117.3
Q ss_pred cccCccccC---CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCC-hHHHHHHHHHHHHHHHhhhhccCCCCC
Q psy13453 548 GLIGFSWLS---SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQST-ASEATLVSILVAKRKMINHWQSKNPSL 623 (764)
Q Consensus 548 N~n~~~~~~---sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsG-gTeANl~Al~aAR~~~~~~~~~~~~~~ 623 (764)
|.....+.. ++.+.++-+++.+.++++||.+.+ ...+|++| ||+|+-.++... ...
T Consensus 20 ~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~--------~~v~~~~gsgT~a~ea~~~nl----~~~-------- 79 (349)
T TIGR01364 20 GTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDN--------YEVLFLQGGATGQFAAVPLNL----LAE-------- 79 (349)
T ss_pred CCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCC--------ceEEEEcCCchHHHHHHHHhc----CCC--------
Confidence 344445543 455568999999999999998653 34677766 998865554421 111
Q ss_pred ccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCC----cccHHHHHHHHHHhhhcCCCceEEEEeeccCCccc
Q psy13453 624 TENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNG----VLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCA 699 (764)
Q Consensus 624 ~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g----~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Ga 699 (764)
..+-+++.++..+|-.. +-|+..|+ +..+.+++.+ .+++++++. ++ .+-+|..|...|.+|.
T Consensus 80 ----~~~~l~i~~G~fg~r~~-~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~v~~th~ETstGv 145 (349)
T TIGR01364 80 ----GKVADYIVTGAWSKKAA-KEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI--SE------DAAYVHYCANETIHGV 145 (349)
T ss_pred ----CCeEEEEECCHHHHHHH-HHHHHhCC-cEEEeccccCCCCCCCCHHhcCC--CC------CCCEEEEcCCCCcccE
Confidence 01235677777777774 45566777 7777766433 345554441 11 3558999999999999
Q ss_pred cccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 700 FDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 700 iDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
..| ++++.+++.+.|||+++.+....+- +.+ |.+.++.||+++ |.|.|++|
T Consensus 146 ~~~-----~l~~~~~~l~iVDavss~g~~~id~-----~~~---d~~~~ssqK~lg-P~Glg~l~ 196 (349)
T TIGR01364 146 EFR-----ELPDVKNAPLVADMSSNILSRPIDV-----SKF---GLIYAGAQKNIG-PAGLTVVI 196 (349)
T ss_pred ecc-----eecccCCCeEEEEccccccCccCCH-----HHc---cEEEEecccccC-CCceEEEE
Confidence 875 6777789999999999887766642 223 799999999987 99999875
No 216
>PRK07681 aspartate aminotransferase; Provisional
Probab=98.74 E-value=3.6e-07 Score=102.67 Aligned_cols=188 Identities=10% Similarity=0.043 Sum_probs=123.7
Q ss_pred HHHHHHHHHhhccc-CccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCC-CcEEEeCChHHHHHHHHHHHHHHHhh
Q psy13453 537 SIVGDMLSGAFGLI-GFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGP-GGGIIQSTASEATLVSILVAKRKMIN 614 (764)
Q Consensus 537 ~~lad~l~~~lN~n-~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~-~~GvfTsGgTeANl~Al~aAR~~~~~ 614 (764)
..+.+.+...++.. ...|. .+....+-+.+.+|+.+..|++-+ . ...++|+|++++...++.+. ..
T Consensus 48 ~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~-------~~~~I~it~G~~~al~~~~~~~----~~ 115 (399)
T PRK07681 48 DFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILN-------ADKEVLLLMGSQDGLVHLPMVY----AN 115 (399)
T ss_pred HHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCC-------CCCeEEECCCcHHHHHHHHHHh----CC
Confidence 34555555555432 12222 245566777888888887776432 1 35788999999876655432 11
Q ss_pred hhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCC--CcccHHHHHHHHHHhhhcCCCceEEEEee
Q psy13453 615 HWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDN--GVLRGDALLTAVKEDLAKGLIPCCLIATL 692 (764)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~--g~md~~~Le~~I~~~~~~G~~p~~Vvata 692 (764)
++..|++.+-++......+...|++++.||++++ +.+|+++|++++.+. +-+|+.+.
T Consensus 116 ---------------~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~v~l~~ 174 (399)
T PRK07681 116 ---------------PGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADK------AKMMILNF 174 (399)
T ss_pred ---------------CCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcccc------ceEEEEeC
Confidence 1224677778888888889999999999999754 468999999888543 33777777
Q ss_pred ccCCcccccc---HHHHHHHHHhcCCEEEEeccccccccccchhhhhh--cCCCcccEEEEcCCccCCCC
Q psy13453 693 GTTGTCAFDN---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLK--RGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 693 GTT~~GaiDp---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l--~gie~aDSit~d~HK~l~~P 757 (764)
.++.||.+-+ +++|+++|++||+|+.+|.+|+....-........ .+...-.-+.-++.|.++.|
T Consensus 175 P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 244 (399)
T PRK07681 175 PGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLA 244 (399)
T ss_pred CCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCc
Confidence 8999999966 78888999999999999999986532111111111 11101123344889988744
No 217
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=98.74 E-value=1.6e-07 Score=105.23 Aligned_cols=151 Identities=14% Similarity=0.128 Sum_probs=105.7
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|....+|+ .++++.|.+. .+++++|+.|+..++ .+ +. +...|+
T Consensus 48 ~~p~~~~Le~----~la~l~g~~~-----------al~~~SG~~Al~~~l-~~----l~---------------pGd~Vi 92 (380)
T PRK06176 48 GNPTRFALEE----LIADLEGGVK-----------GFAFASGLAGIHAVF-SL----FQ---------------SGDHVL 92 (380)
T ss_pred CChhHHHHHH----HHHHHhCCCC-----------EEEECCHHHHHHHHH-HH----cC---------------CCCEEE
Confidence 4566666665 6777777543 477788887764332 21 11 112466
Q ss_pred ecCCcchhH----HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSSV----EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~Sv----~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...+.+. ...+...|+.++.++.+ |+++++++++++ +-+|++...++.+|.+-|+++|+++|+
T Consensus 93 ~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~-----d~e~l~~ai~~~------t~lV~lesP~Nptg~~~di~~I~~la~ 161 (380)
T PRK06176 93 LGDDVYGGTFRLFDKVLVKNGLSCTIIDTS-----DLSQIKKAIKPN------TKALYLETPSNPLLKITDLAQCASVAK 161 (380)
T ss_pred EcCCChhHHHHHHHHHHHhcCeEEEEcCCC-----CHHHHHHhcCcC------ceEEEEECCCCCCceecCHHHHHHHHH
Confidence 666655443 33455678888877653 799999888654 347777888999999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~ 759 (764)
++|++++||.+|+......| . +. .+|-++.++|||++.|-+
T Consensus 162 ~~gi~vivD~t~a~~~~~~p----~--~~-gaDivv~S~tK~l~g~~d 202 (380)
T PRK06176 162 DHGLLTIVDNTFATPYYQNP----L--LL-GADIVVHSGTKYLGGHSD 202 (380)
T ss_pred HcCCEEEEECCccccccCCc----c--cc-CCCEEEecCceeccCCcc
Confidence 99999999999986433222 1 12 569999999999998754
No 218
>PLN02651 cysteine desulfurase
Probab=98.73 E-value=2.3e-07 Score=102.98 Aligned_cols=171 Identities=9% Similarity=-0.049 Sum_probs=112.8
Q ss_pred ccccCCcceeeeeHHHHHhhc---CCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchh
Q psy13453 11 AYPSETLSLLIYESFKATHSL---SGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNA 87 (764)
Q Consensus 11 ~~~~~~~~~~~YSv~KAa~~L---Gl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ 87 (764)
+..++. .|+|+.++...+ |+. ++.||+++++++|+++|+++|+++ +-+++-+..++++|.+.|+++
T Consensus 91 vl~~~~---~h~s~~~~~~~~~~~g~~---v~~v~~~~~~~~d~~~l~~~i~~~-----t~lv~v~~~~n~tG~~~~l~~ 159 (364)
T PLN02651 91 VITTQT---EHKCVLDSCRHLQQEGFE---VTYLPVKSDGLVDLDELAAAIRPD-----TALVSVMAVNNEIGVIQPVEE 159 (364)
T ss_pred EEEccc---ccHHHHHHHHHHHhcCCE---EEEEccCCCCcCCHHHHHHhcCCC-----cEEEEEECCCCCceecccHHH
Confidence 444555 577766665543 554 489999989999999999999753 224457788889999999999
Q ss_pred hhc-----CCCceecccc--------------------cccc-----ceeeeecCCCc--cccccccccccCCcccCCCC
Q psy13453 88 PVS-----NGPLKVGGVL--------------------RRVY-----SSCLVPRGQKS--LRTTVLFHFLFQHWQIPLGR 135 (764)
Q Consensus 88 ia~-----~~wlHVDa~l--------------------~~~y-----~s~ll~rd~~~--l~~~~s~~~d~~d~tle~SR 135 (764)
|++ ++|+|||++. .|++ +++++++++.. +...+. .....+.--.|+.
T Consensus 160 I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK~~gp~G~g~l~v~~~~~~~l~p~~~-g~~~~~~~~~GT~ 238 (364)
T PLN02651 160 IGELCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHKIYGPKGVGALYVRRRPRVRLEPLMS-GGGQERGRRSGTE 238 (364)
T ss_pred HHHHHHHcCCEEEEEcchhhCCcccCcccCCCCEEEechhhhCCCCceEEEEEcCCCCCCCCcccc-CCCccCCccCCCc
Confidence 887 8899999942 1222 14566665321 111100 0000000113344
Q ss_pred cc-cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEeCC--CC---ceeEEEEee
Q psy13453 136 RF-RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQ-DDRFELVCP--PS---MGLVCFRLK 194 (764)
Q Consensus 136 r~-~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~-~p~~ell~~--P~---l~iV~Fry~ 194 (764)
.. ..+.+-+++.++-. +..++.++..++++++.+.+++ .++++++++ |+ -++++|.+.
T Consensus 239 ~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~ 303 (364)
T PLN02651 239 NTPLVVGLGAACELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFA 303 (364)
T ss_pred cHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeC
Confidence 22 23466777777754 5588889999999999999986 789999985 33 348999763
No 219
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.73 E-value=3.8e-07 Score=102.62 Aligned_cols=189 Identities=16% Similarity=0.098 Sum_probs=133.5
Q ss_pred HHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhh
Q psy13453 536 PSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINH 615 (764)
Q Consensus 536 ~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~ 615 (764)
+..+-+.+...++.....|..+....++-+.+.+++.+..|++-. .....++|.|++++++.++.+-.+.
T Consensus 43 p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~------~~~eiivt~Ga~~al~~~~~a~~~p---- 112 (393)
T COG0436 43 PEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVD------PEEEIIVTAGAKEALFLAFLALLNP---- 112 (393)
T ss_pred CHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCC------CCCeEEEeCCHHHHHHHHHHHhcCC----
Confidence 344444444444433224556677788899999999999885432 1134899999999998887754221
Q ss_pred hccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecC---CCCcccHHHHHHHHHHhhhcCCCceEEEEee
Q psy13453 616 WQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSD---DNGVLRGDALLTAVKEDLAKGLIPCCLIATL 692 (764)
Q Consensus 616 ~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d---~~g~md~~~Le~~I~~~~~~G~~p~~Vvata 692 (764)
.-.|++.+=.-.+......+.|..+..||++ .++.+|+++|+++|.+.++ +|+.+.
T Consensus 113 ---------------GDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk------~i~ln~ 171 (393)
T COG0436 113 ---------------GDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTK------AIILNS 171 (393)
T ss_pred ---------------CCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccce------EEEEeC
Confidence 1235566666667777788999999999975 3799999999999988554 999999
Q ss_pred ccCCcccc---ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCc--ccEEEE-cCCccCCC
Q psy13453 693 GTTGTCAF---DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEY--VDSFDF-NTHKWLLV 756 (764)
Q Consensus 693 GTT~~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~--aDSit~-d~HK~l~~ 756 (764)
.+|.||++ +.+++|+++|++|++|+..|-+|.....--.++...+ .++. -..|++ ++.|.++.
T Consensus 172 P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~-~~~~~~~~~i~i~s~SK~~~m 240 (393)
T COG0436 172 PNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSIL-ELAGARDRTITINSFSKTYGM 240 (393)
T ss_pred CCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHh-hcCCCcceEEEEecccccccc
Confidence 99999999 5788899999999999999999988543221111111 1111 125666 67787664
No 220
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=98.71 E-value=4.1e-07 Score=105.30 Aligned_cols=178 Identities=17% Similarity=0.146 Sum_probs=121.4
Q ss_pred chHHHHHHHHHHHHHHHcC----CCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 558 PACTELEVLVMNWLGKALG----LPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 558 p~~t~lE~~v~~~la~llG----~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
.....+-+.+.+|+.+..| +++ ...++|+|+++++.+.+.+..+ +...
T Consensus 94 ~G~~~LR~aiA~~l~~~~g~~v~v~p---------e~Ivit~Ga~~al~~l~~~l~~-------------------pGD~ 145 (496)
T PLN02376 94 HGLKKFRQAIAHFMGKARGGKVTFDP---------ERVVMSGGATGANETIMFCLAD-------------------PGDV 145 (496)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCcCCh---------hhEEEccchHHHHHHHHHHhCC-------------------CCCE
Confidence 3445566777778887766 333 3678999999988766553211 1224
Q ss_pred EEecCCcchhHHHHHH-hCCCceEEEecC--CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHHH
Q psy13453 634 AYTSDQSNSSVEKSAI-IGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEELG 707 (764)
Q Consensus 634 i~~S~~aH~Sv~kAa~-~lGl~v~~Vp~d--~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eIa 707 (764)
|++..-.+......+. ..|++++.||++ +++.+|+++|++++++..+.+..+-+|+.+..++.+|.+-+ +++|.
T Consensus 146 Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~ 225 (496)
T PLN02376 146 FLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLV 225 (496)
T ss_pred EEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHH
Confidence 6777777777777777 489999999995 46789999999988665444555666777889999999955 66678
Q ss_pred HHHHhcCCEEEEeccccccccccchhhh---hhcCCC----cccE--EEEcCCccCCCC-cCceee
Q psy13453 708 PICQEYNIWLHVDAAYAGSALLLPEYAH---LKRGLE----YVDS--FDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 708 ~i~~~~glwLHVDaA~Gg~~l~~~~~r~---~l~gie----~aDS--it~d~HK~l~~P-~~~g~l 763 (764)
++|++||+|+.+|-+|+....-.+.+.. ...... .-|- +..++.|.++.| +-+|.+
T Consensus 226 ~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~l 291 (496)
T PLN02376 226 RFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIV 291 (496)
T ss_pred HHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEE
Confidence 8899999999999999975432222211 111110 0122 357999999755 555554
No 221
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=98.71 E-value=8e-07 Score=100.18 Aligned_cols=220 Identities=13% Similarity=0.051 Sum_probs=142.7
Q ss_pred eeHHHHHhhcCCCCC-CeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCce
Q psy13453 22 YESFKATHSLSGTPD-QVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLK 95 (764)
Q Consensus 22 YSv~KAa~~LGl~~~-~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlH 95 (764)
|.+.++++..|+... .++.++.++++.+|++++++.+++.. .++-+++-+..++.+|.+-|+++|++ +++++
T Consensus 128 ~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~--~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~ 205 (406)
T TIGR01814 128 YAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNG--DDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVG 205 (406)
T ss_pred HHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcC--CCeEEEEEeccccccceecCHHHHHHHHHHcCCEEE
Confidence 556666777787642 22567777788999999999997531 12224457888999999999999987 88999
Q ss_pred ecccc--------------------ccc-----cceeeeecCCCc--ccccccc---c-----ccc-CCccc-----C-C
Q psy13453 96 VGGVL--------------------RRV-----YSSCLVPRGQKS--LRTTVLF---H-----FLF-QHWQI-----P-L 133 (764)
Q Consensus 96 VDa~l--------------------~~~-----y~s~ll~rd~~~--l~~~~s~---~-----~d~-~d~tl-----e-~ 133 (764)
||++. .++ .++.++++.+.. +.-.+.. . +++ ..+.. + |
T Consensus 206 vD~aq~~G~~~id~~~~gvD~~~~s~hK~l~g~pG~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~G 285 (406)
T TIGR01814 206 FDLAHAVGNVPLDLHDWGVDFACWCTYKYLNAGPGAGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRIS 285 (406)
T ss_pred EEcccccCCcccccccCCCCEEEEcCccccCCCCCeEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeC
Confidence 99932 122 133333332211 1100000 0 000 00010 1 1
Q ss_pred CCcc-cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEeCCCC----ceeEEEEeecccccccccc
Q psy13453 134 GRRF-RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQD----DRFELVCPPS----MGLVCFRLKVRFWDKLDNL 204 (764)
Q Consensus 134 SRr~-~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~----p~~ell~~P~----l~iV~Fry~P~~~~~~~~~ 204 (764)
+... ..+.+-+++..+-..|..+..++..++++++.+.+++. ++++++++.+ .++|+|++. .
T Consensus 286 T~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~-------- 356 (406)
T TIGR01814 286 NPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-V-------- 356 (406)
T ss_pred CccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-C--------
Confidence 2211 22355667777777788999999999999999999875 4699987643 358888752 0
Q ss_pred ccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 205 FGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 205 ~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
+ ...+.++|.++|.+. . ..+...+|+++++..+++++++.+++.|+++
T Consensus 357 ------~----~~~~~~~L~~~gi~v-~---~~~~~~iRiS~~~~~nt~~did~l~~~l~~~ 404 (406)
T TIGR01814 357 ------P----GKAVFQALIKRGVIG-D---KREPSVIRVAPVPLYNTFVDVYDAVNVLEEI 404 (406)
T ss_pred ------C----HHHHHHHHHHCCEEE-e---ccCCCeEEEechhccCCHHHHHHHHHHHHHH
Confidence 0 146778888888642 2 2334589998878889999999999999875
No 222
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=98.71 E-value=1.8e-07 Score=104.93 Aligned_cols=152 Identities=17% Similarity=0.112 Sum_probs=106.7
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|....+|+ +++++.|.+ ..++++||++++..++.+.. . ++..|+
T Consensus 50 ~~pt~~~L~~----~lA~l~g~~-----------~~i~~~sg~~Ai~~~l~~l~----~---------------~GD~Vl 95 (386)
T PRK08045 50 GNPTRDVVQR----ALAELEGGA-----------GAVLTNTGMSAIHLVTTVFL----K---------------PGDLLV 95 (386)
T ss_pred CCccHHHHHH----HHHHHhCCC-----------eEEEECCHHHHHHHHHHHHc----C---------------CCCEEE
Confidence 3455555555 677777632 37899999998777665321 1 122467
Q ss_pred ecCCcchhHHHH----HHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~Sv~kA----a~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
+++..|.+.... +...|+.+..++ ..|++++++++++. +-+|+....++.+|.+-|+++|+++|+
T Consensus 96 ~~~~~y~~~~~~~~~~~~~~gi~v~~vd-----~~d~e~l~~~l~~~------tklV~l~sP~NPtG~v~di~~I~~ia~ 164 (386)
T PRK08045 96 APHDCYGGSYRLFDSLAKRGCYRVLFVD-----QGDEQALRAALAEK------PKLVLVESPSNPLLRVVDIAKICHLAR 164 (386)
T ss_pred EcCCCcHHHHHHHHHHHhhCCeEEEEeC-----CCCHHHHHHhcccC------CeEEEEECCCCCCCEecCHHHHHHHHH
Confidence 777777653332 223445555553 26899999888653 337778899999999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~ 759 (764)
++|+++.||.+|+.+....| .-. .||-+..++|||++.+-+
T Consensus 165 ~~g~~vivDeay~~~~~~~p----l~~---gaDivv~S~tK~l~G~~d 205 (386)
T PRK08045 165 EAGAVSVVDNTFLSPALQNP----LAL---GADLVLHSCTKYLNGHSD 205 (386)
T ss_pred HcCCEEEEECCCCccccCCc----hhh---CCCEEEeecceeccCCCC
Confidence 99999999999987644222 111 459999999999997765
No 223
>PRK14012 cysteine desulfurase; Provisional
Probab=98.71 E-value=1.8e-07 Score=105.22 Aligned_cols=225 Identities=12% Similarity=0.013 Sum_probs=134.4
Q ss_pred ccccCCcceeeeeHHHHHhhc---CCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchh
Q psy13453 11 AYPSETLSLLIYESFKATHSL---SGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNA 87 (764)
Q Consensus 11 ~~~~~~~~~~~YSv~KAa~~L---Gl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ 87 (764)
+.+++. .|+|+.++++.+ |+.. +.|++++++.+|+++|+++|+++ +.+++.+..++++|.+.|+++
T Consensus 97 Vi~~~~---~~~s~~~~~~~~~~~g~~~---~~v~~~~~g~~d~~~l~~~i~~~-----t~lv~~~~~~n~tG~~~~~~~ 165 (404)
T PRK14012 97 IITSKT---EHKAVLDTCRQLEREGFEV---TYLDPQSNGIIDLEKLEAAMRDD-----TILVSIMHVNNEIGVIQDIAA 165 (404)
T ss_pred EEEecC---ccHHHHHHHHHHHhCCCEE---EEEccCCCCcCCHHHHHHhcCCC-----CEEEEEECcCCCccchhhHHH
Confidence 444544 688887777665 7665 99999999999999999999753 235568888899999999999
Q ss_pred hhc-----CCCceeccccc--------------------cc----cc-eeeeecCCCccccccccccccCCcccCCCCcc
Q psy13453 88 PVS-----NGPLKVGGVLR--------------------RV----YS-SCLVPRGQKSLRTTVLFHFLFQHWQIPLGRRF 137 (764)
Q Consensus 88 ia~-----~~wlHVDa~l~--------------------~~----y~-s~ll~rd~~~l~~~~s~~~d~~d~tle~SRr~ 137 (764)
|++ ++++|+|++.. ++ .+ ++++.++...... ...+...+. .|++
T Consensus 166 I~~la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g~G~l~~~~~~~~~~----~~~~~g~~~--~~~~ 239 (404)
T PRK14012 166 IGEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHKIYGPKGIGALYVRRKPRVRL----EAQMHGGGH--ERGM 239 (404)
T ss_pred HHHHHHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehhhccCCCceEEEEEecCCCCCC----CceecCCCc--cCCc
Confidence 886 78999999521 11 11 3444443321110 000000000 0111
Q ss_pred c----HHHHH----HHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC-----CceeEEEEeecccccccccc
Q psy13453 138 R----ALKLW----MTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP-----SMGLVCFRLKVRFWDKLDNL 204 (764)
Q Consensus 138 ~----ALklW----atL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P-----~l~iV~Fry~P~~~~~~~~~ 204 (764)
+ ....| +++.. -..++.+..++..++++++.+.|++.+++++..++ ....+.|.+.+
T Consensus 240 ~~gt~~~~~~~~l~~al~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~--------- 309 (404)
T PRK14012 240 RSGTLPTHQIVGMGEAARI-AKEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVE--------- 309 (404)
T ss_pred cCCCcCHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcC---------
Confidence 1 11222 23322 24567788899999999999999999999887542 22345665431
Q ss_pred ccCccCCccHHHHHHHHHHHhcCcEEEEe-------------ceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 205 FGTISFGDNDLNKAVYDRIIARKVIYIVK-------------GSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 205 ~~~~~~~~d~~n~~L~~~L~~~G~~~vs~-------------t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
.+++...+.+.....|..+... +.-.....+|++ .++.+++++++.+++.|+++.+.+
T Consensus 310 -------~~~~~~~l~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls-~~~~~t~~dvd~~~~~l~~~~~~~ 380 (404)
T PRK14012 310 -------GESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFS-LGRFTTEEEIDYAIELVRKSIGKL 380 (404)
T ss_pred -------HHHHHHhCCCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEE-ecCCCCHHHHHHHHHHHHHHHHHH
Confidence 1112222111111111111000 000113579996 556689999999999999988775
No 224
>PLN02721 threonine aldolase
Probab=98.71 E-value=4.1e-07 Score=99.73 Aligned_cols=224 Identities=13% Similarity=0.021 Sum_probs=130.9
Q ss_pred eeeeHHH---HHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCC-CCcEE--EEeeCCcccccccC---chhhhc
Q psy13453 20 LIYESFK---ATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSF-LCPMC--SGYCGRTLHQDIQS---LNAPVS 90 (764)
Q Consensus 20 ~~YSv~K---Aa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G-~~p~~--VatAGTT~~G~iDp---i~~ia~ 90 (764)
.||++.+ .+...|+.. +.||.++++++|+++|+++|++....+ ..+-+ +.+..+.++|.+-| ++++++
T Consensus 89 ~~~~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~ 165 (353)
T PLN02721 89 SHIHLYENGGISTLGGVHP---RTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGE 165 (353)
T ss_pred cceehhcccchhhhcCcee---EecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHH
Confidence 6888888 467788777 889999899999999999998532111 12333 34555667787533 566654
Q ss_pred -----CCCceecccccc--------c------cceeeeecCCCcccc---cc-cccccc------CCcccCCCCcccHHH
Q psy13453 91 -----NGPLKVGGVLRR--------V------YSSCLVPRGQKSLRT---TV-LFHFLF------QHWQIPLGRRFRALK 141 (764)
Q Consensus 91 -----~~wlHVDa~l~~--------~------y~s~ll~rd~~~l~~---~~-s~~~d~------~d~tle~SRr~~ALk 141 (764)
++|+|+|+.... . +...+.+.-.+.+.. .+ ..+.++ ...+..++.+.-+..
T Consensus 166 l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
T PLN02721 166 LAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGSKSFIRKAKRLRKTLGGGMRQVGVL 245 (353)
T ss_pred HHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecCHHHHHhHHHHHHhcCCCeehhHHH
Confidence 899999985310 0 000001111111110 00 000000 000111111111111
Q ss_pred HHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-eCCCCceeEEEEeeccccccccccccCccCCccHHHHHHH
Q psy13453 142 LWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFEL-VCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVY 220 (764)
Q Consensus 142 lWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~el-l~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~ 220 (764)
..+++. +.+.+.+.+++..++++++.+.|++++++++ +.+|..+.+.|+..... .. -...+.
T Consensus 246 ~~~~~~--~l~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~--~~~~~~ 308 (353)
T PLN02721 246 AAAALV--ALQENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGS-------------RI--TAEKLC 308 (353)
T ss_pred HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCc-------------cc--cHHHHH
Confidence 111221 2233344566667888999999999999976 67787888777753100 01 125788
Q ss_pred HHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 221 DRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 221 ~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
++|.+.|..+... +..++|+++ +..+++++++.+++.|+++.+
T Consensus 309 ~~L~~~gi~v~~~----~~~~lR~~~-~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 309 KSLEEHGVLLMPG----NSSRIRVVT-HHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred HHHHhCCcEEecC----CCceEEEEe-cCcCCHHHHHHHHHHHHHHhh
Confidence 8998888864432 346899976 456789999999999988654
No 225
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=98.70 E-value=5.5e-07 Score=99.65 Aligned_cols=217 Identities=10% Similarity=0.022 Sum_probs=139.9
Q ss_pred HHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceeccc
Q psy13453 25 FKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGGV 99 (764)
Q Consensus 25 ~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa~ 99 (764)
.+.|+..|+.. +.||+++++.+|+++++++|+++.. ..++..+...+++|.+-|+++|++ +.+++||+.
T Consensus 94 ~~~a~~~g~~~---~~v~~~~~~~~d~~~l~~~l~~~~~---~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~ 167 (363)
T TIGR02326 94 VQIAEYLGIPH---HVVDTGEVEPPDVVEVEAILAADPA---ITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAM 167 (363)
T ss_pred HHHHHHcCCce---EEEeCCCCCCCCHHHHHHHHhhCCC---ccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEcc
Confidence 47788899877 9999999999999999999986421 223345666899999999999886 789999994
Q ss_pred c--------------------ccc-----cc-eeeeecCCCccccc----cccccccC-Cc-cc---CCCC-----cccH
Q psy13453 100 L--------------------RRV-----YS-SCLVPRGQKSLRTT----VLFHFLFQ-HW-QI---PLGR-----RFRA 139 (764)
Q Consensus 100 l--------------------~~~-----y~-s~ll~rd~~~l~~~----~s~~~d~~-d~-tl---e~SR-----r~~A 139 (764)
. .++ .+ ++++.+.+. +... .....+.. .| .. .+.+ ....
T Consensus 168 ~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~ 246 (363)
T TIGR02326 168 SSFGGIPIDIAELHIDYLISSANKCIQGVPGFGFVIARQAE-LAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVV 246 (363)
T ss_pred ccccCcccchhhcCccEEEecCccccccCCcceEEEECHHH-HHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHH
Confidence 2 122 11 344443321 1100 00000000 00 00 0111 1233
Q ss_pred HHHHHHHHHccHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC--Ccee-EEEEeeccccccccccccCccCCccHH
Q psy13453 140 LKLWMTLRSYGLK-GLQAYLRKHISLAKKFADLVEQDDRFELVCPP--SMGL-VCFRLKVRFWDKLDNLFGTISFGDNDL 215 (764)
Q Consensus 140 LklWatL~~lG~e-Gy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P--~l~i-V~Fry~P~~~~~~~~~~~~~~~~~d~~ 215 (764)
+.+..+++.+-.+ |+.++.++..++++++.+.|++. +++++.++ ..++ ++|++.+.. ..+
T Consensus 247 ~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-------------~~~-- 310 (363)
T TIGR02326 247 HAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYSPEDP-------------DYR-- 310 (363)
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEEEECCCCC-------------CCC--
Confidence 4667778888776 48888999999999999999886 88887654 3444 567653210 011
Q ss_pred HHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 216 NKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 216 n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
..++.+.|.++|..+...... +...+|++.+. +.+.++++.+++.|+++
T Consensus 311 ~~~v~~~L~~~gi~v~~g~~~-~~~~iRi~~~~-~~~~edv~~~l~~l~~~ 359 (363)
T TIGR02326 311 FADFYQRLKEQGFVIYPGKVS-QVDCFRIGNIG-EVDAADITRLLTAIGKA 359 (363)
T ss_pred HHHHHHHHHHCCEEEECCcCC-CCCEEEEecCC-CCCHHHHHHHHHHHHHH
Confidence 246888888888765433222 34689997554 56899999999999775
No 226
>PLN02187 rooty/superroot1
Probab=98.70 E-value=6.1e-07 Score=103.09 Aligned_cols=167 Identities=8% Similarity=0.069 Sum_probs=113.0
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEe
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT 636 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~ 636 (764)
......+.+.+.+|+.+-+|++-+ ....++|+|+++++..++.+.. . +...|++
T Consensus 107 ~~G~~~lR~aiA~~~~~~~~~~~~-------~~~I~it~G~~~al~~~~~~l~----~---------------pGd~Vlv 160 (462)
T PLN02187 107 GAGILPARRAVADYMNRDLPHKLT-------PEDIFLTAGCNQGIEIVFESLA----R---------------PNANILL 160 (462)
T ss_pred CCChHHHHHHHHHHHHHhcCCCCC-------cccEEEeCCHHHHHHHHHHHhc----C---------------CCCEEEE
Confidence 334455666677777766665321 2467899999998877665331 1 1124666
Q ss_pred cCCcchhHHHHHHhCCCceEEEecC--CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc---cHHHHHHHHH
Q psy13453 637 SDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD---NLEELGPICQ 711 (764)
Q Consensus 637 S~~aH~Sv~kAa~~lGl~v~~Vp~d--~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD---pl~eIa~i~~ 711 (764)
..-+.......+...|++++.++.. +++.+|+++|++++++. +.+|+.+..++.||.+- .+++|+++|+
T Consensus 161 ~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~------~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~ 234 (462)
T PLN02187 161 PRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADEN------TVAMVVINPNNPCGNVYSHDHLKKVAETAR 234 (462)
T ss_pred eCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCC------cEEEEEeCCCCCCCCccCHHHHHHHHHHHH
Confidence 6666766777788899999999874 46899999999887543 34777777899999985 4888999999
Q ss_pred hcCCEEEEeccccccccccchhhh--hhcCCCcccEEE-EcCCccCCCC
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFD-FNTHKWLLVN 757 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~--~l~gie~aDSit-~d~HK~l~~P 757 (764)
+||+|+.+|.+|+-...-.+.+.. .+... ...|+ -++-|.++.|
T Consensus 235 ~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~--~~vi~l~SfSK~f~~p 281 (462)
T PLN02187 235 KLGIMVISDEVYDRTIFGDNPFVSMGKFASI--VPVLTLAGISKGWVVP 281 (462)
T ss_pred HCCCEEEEeccccccccCCCCceeHHHhccC--CcEEEEecchhhcCCc
Confidence 999999999999874431111111 11111 12444 4788986655
No 227
>PRK02948 cysteine desulfurase; Provisional
Probab=98.70 E-value=7.6e-07 Score=99.21 Aligned_cols=222 Identities=12% Similarity=0.045 Sum_probs=135.6
Q ss_pred eeeeHHHHH---hhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----C
Q psy13453 20 LIYESFKAT---HSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----N 91 (764)
Q Consensus 20 ~~YSv~KAa---~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~ 91 (764)
.|.|+..++ +..|... +.||+++++++|+++|+++++++ +-+++-+.+++++|.+.|++++++ +
T Consensus 97 ~h~s~~~~~~~~~~~g~~v---~~v~~~~~~~~d~~~l~~~l~~~-----~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~ 168 (381)
T PRK02948 97 EHASIHSYFQSLESQGYTV---TEIPVDKSGLIRLVDLERAITPD-----TVLASIQHANSEIGTIQPIAEIGALLKKYN 168 (381)
T ss_pred ccHHHHHHHHHHHhCCCEE---EEEeeCCCCCCCHHHHHHhcCCC-----CEEEEEECCcCCcEeehhHHHHHHHHHHcC
Confidence 566665554 4456655 89999988999999999998642 224467889999999999999876 7
Q ss_pred CCceeccccc--------------------cc-cc----eeeeecCCCccccccccccccCCcc-cCCCCc-ccHHHHHH
Q psy13453 92 GPLKVGGVLR--------------------RV-YS----SCLVPRGQKSLRTTVLFHFLFQHWQ-IPLGRR-FRALKLWM 144 (764)
Q Consensus 92 ~wlHVDa~l~--------------------~~-y~----s~ll~rd~~~l~~~~s~~~d~~d~t-le~SRr-~~ALklWa 144 (764)
+|+|||+... ++ ++ ++++.+....+...+.. ...... ..++-. ...+.+-+
T Consensus 169 ~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~--~~~~~~~~~~t~~~~~~~a~~~ 246 (381)
T PRK02948 169 VLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIYGPKGVGAVYINPQVRWKPVFPG--TTHEKGFRPGTVNVPGIAAFLT 246 (381)
T ss_pred CEEEEEChhhccccccCcccCCCCEEEecHHhcCCCCcEEEEEEcCCCCCCCcccC--CCCCCCcCCCCccHHHHHHHHH
Confidence 8999998421 00 11 23333322111100000 000000 111221 12234455
Q ss_pred HHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe--CCCC---ceeEEEEeeccccccccccccCccCCccHHHHHH
Q psy13453 145 TLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELV--CPPS---MGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAV 219 (764)
Q Consensus 145 tL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell--~~P~---l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L 219 (764)
+++.+ .++..+..++..++++++.+.|++. ++++. +++. ..+++|... ..+ ..++
T Consensus 247 al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~~~~~~~~~~i~~~~~~----------------~~~--~~~~ 306 (381)
T PRK02948 247 AAENI-LKNMQEESLRFKELRSYFLEQIQTL-PLPIEVEGHSTSCLPHIIGVTIK----------------GIE--GQYT 306 (381)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEeCCCccCcCCEEEEEeC----------------CCC--HHHH
Confidence 55544 3567888899999999999999987 44433 2222 235667532 111 1345
Q ss_pred HHHHHhcCcEEEEece----e---------------CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 220 YDRIIARKVIYIVKGS----F---------------QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 220 ~~~L~~~G~~~vs~t~----l---------------~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
...|.++|...-.... + ....++|+++ +..+++++++.+++.|+++.+.+-+
T Consensus 307 ~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~-~~~~t~~di~~l~~~l~~~~~~~~~ 377 (381)
T PRK02948 307 MLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSF-GQQTTKDQIDTTIHALETIGNQFYR 377 (381)
T ss_pred HHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEc-CCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 6677777875543221 1 1236899985 5778899999999999998766543
No 228
>PTZ00377 alanine aminotransferase; Provisional
Probab=98.69 E-value=4.2e-07 Score=104.89 Aligned_cols=150 Identities=15% Similarity=0.147 Sum_probs=115.5
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 552 FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 552 ~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
..|..+....++-+.+.+|+.+..|++-+ ....++|+|+++++.+++.+... . +.
T Consensus 109 ~~Y~~~~G~~~LR~aia~~~~~~~g~~~~-------~~~I~it~Ga~~al~~~~~~l~~----~--------------~g 163 (481)
T PTZ00377 109 GAYTDSAGYPFVRKAVAAFIERRDGVPKD-------PSDIFLTDGASSGIKLLLQLLIG----D--------------PS 163 (481)
T ss_pred cCcCcccCCHHHHHHHHHHHHHhcCCCCC-------hhhEEEcCCHHHHHHHHHHHhcc----C--------------CC
Confidence 44555556777888888999887776532 24688999999998777654310 0 12
Q ss_pred eEEEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHH
Q psy13453 632 LVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEEL 706 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eI 706 (764)
..|++..-++......++..|.+++.||+++ ++.+|+++|++++++..++|..+-+|+.+..++.||.+-+ +++|
T Consensus 164 D~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i 243 (481)
T PTZ00377 164 DGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEI 243 (481)
T ss_pred CEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHH
Confidence 2477788888888889999999999999974 3589999999999875555545656666678899999966 8889
Q ss_pred HHHHHhcCCEEEEecccccc
Q psy13453 707 GPICQEYNIWLHVDAAYAGS 726 (764)
Q Consensus 707 a~i~~~~glwLHVDaA~Gg~ 726 (764)
+++|++|++|+++|-+|+-.
T Consensus 244 ~~~a~~~~~~iI~De~Y~~l 263 (481)
T PTZ00377 244 IKFCYEKGIVLMADEVYQEN 263 (481)
T ss_pred HHHHHHCCCEEEEehhhHhh
Confidence 99999999999999999863
No 229
>PLN02822 serine palmitoyltransferase
Probab=98.69 E-value=4.8e-07 Score=104.43 Aligned_cols=162 Identities=10% Similarity=0.099 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 560 CTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 560 ~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
......++.+.+++++|.++ ..+|++|++ ++..++.+. .. +..+|++...
T Consensus 152 ~~~~~~~Lee~La~~~~~~~----------~i~~s~G~~-a~~sai~a~----~~---------------~gd~Ii~d~~ 201 (481)
T PLN02822 152 TIDVHLDCETKIAKFLGTPD----------SILYSYGLS-TIFSVIPAF----CK---------------KGDIIVADEG 201 (481)
T ss_pred CHHHHHHHHHHHHHHhCCCC----------EEEECCHHH-HHHHHHHHh----CC---------------CCCEEEEeCC
Confidence 35566667777888887654 356666655 565544422 11 1235778899
Q ss_pred cchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhc----CCCceEEEEeeccCCccccccHHHHHHHHHhcCC
Q psy13453 640 SNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAK----GLIPCCLIATLGTTGTCAFDNLEELGPICQEYNI 715 (764)
Q Consensus 640 aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~----G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~gl 715 (764)
.|+++..++.+.|.+++.++.+ |.++|+..+++..++ .....+|+...-...+|.+-|+++|+++|++||+
T Consensus 202 ~H~s~~~~~~ls~~~~~~~~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~ 276 (481)
T PLN02822 202 VHWGIQNGLYLSRSTIVYFKHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRF 276 (481)
T ss_pred ccHHHHHHHHHcCCeEEEECCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCC
Confidence 9999999999999888888765 466777777654322 1222466665566679999999999999999999
Q ss_pred EEEEeccccccccccchhhh--hhcCC--CcccEEEEcCCccCCCC
Q psy13453 716 WLHVDAAYAGSALLLPEYAH--LKRGL--EYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 716 wLHVDaA~Gg~~l~~~~~r~--~l~gi--e~aDSit~d~HK~l~~P 757 (764)
+|++|-+|+-+.+ -+..+. ..-|+ +..|-++.++.|.++.+
T Consensus 277 ~LIvDEa~s~gvl-G~~G~G~~e~~~v~~~~~dii~~s~sKalg~~ 321 (481)
T PLN02822 277 RVLLDESNSFGVL-GKSGRGLSEHFGVPIEKIDIITAAMGHALATE 321 (481)
T ss_pred EEEEECCcccccc-CCCCCChHHHcCCCCCCCeEEEecchhhhhhC
Confidence 9999999984332 211111 11234 35788999999998743
No 230
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=98.69 E-value=6.3e-07 Score=100.57 Aligned_cols=160 Identities=17% Similarity=0.119 Sum_probs=105.8
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
.++.++|++++|.+. ....+||+||++||..|+.++|.. .+ +.+|.....-|-+.
T Consensus 88 ~~la~~l~~~~~~~~--------~~~v~~~~sgsea~~~al~~~~~~--g~---------------~~ii~~~~~yhg~~ 142 (398)
T PRK03244 88 IALAERLVELLGAPE--------GGRVFFCNSGAEANEAAFKLARLT--GR---------------TKIVAAEGGFHGRT 142 (398)
T ss_pred HHHHHHHHHhCCCCC--------CCEEEEeCchHHHHHHHHHHHHHH--CC---------------CeEEEECCCcCCcc
Confidence 467778888887532 125789999999999999988763 11 12455555666665
Q ss_pred HHHHHhCCC------------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc----HHHHHH
Q psy13453 645 EKSAIIGDV------------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN----LEELGP 708 (764)
Q Consensus 645 ~kAa~~lGl------------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp----l~eIa~ 708 (764)
..+..+.|. ++..+|. .|+++|++.+.+ .+.+|+..-..+.+|.+-| +++|.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~~------~~~aviiep~~~~~G~~~~~~~~l~~l~~ 211 (398)
T PRK03244 143 MGALALTGQPAKRAPFEPLPGGVEHVPY-----GDVDALAAAVDD------DTAAVFLEPIQGEAGVVPPPAGYLAAARE 211 (398)
T ss_pred HHHHhccCCcccccCCCCCCCCceEeCC-----CCHHHHHHhhcC------CeEEEEEecccCCCCCcCCCHHHHHHHHH
Confidence 555544442 2333332 378899988742 2446666666788898876 999999
Q ss_pred HHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 709 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 709 i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+|++||++|++|.+|.+.-....-+.....|+ ..|-+++ .|+++..+.+|.+
T Consensus 212 l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~-~pDi~t~--sK~l~~G~~ig~~ 263 (398)
T PRK03244 212 ITDRHGALLVLDEVQTGIGRTGAWFAHQHDGV-TPDVVTL--AKGLGGGLPIGAC 263 (398)
T ss_pred HHHHcCCEEEEeccccCCcccchHHhhhhhCC-CCCEEEE--chhhhCCcccEEE
Confidence 99999999999999987422111111122354 4676655 6999865666654
No 231
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=98.68 E-value=2.7e-07 Score=101.13 Aligned_cols=153 Identities=16% Similarity=0.012 Sum_probs=105.4
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
.++.+++++++|.+++ ..++|+|+++++... ..+ +. ++ .|++.+-++.+.
T Consensus 50 ~~lr~~la~~~~~~~~---------~i~~t~G~~~~i~~~-~~~----l~---------------~g-~vl~~~p~y~~~ 99 (330)
T TIGR01140 50 DELRAAAAAYYGLPAA---------SVLPVNGAQEAIYLL-PRL----LA---------------PG-RVLVLAPTYSEY 99 (330)
T ss_pred HHHHHHHHHHhCCChh---------hEEECCCHHHHHHHH-HHH----hC---------------CC-eEEEeCCCcHHH
Confidence 5566788888887542 577888888876543 221 11 12 255667778888
Q ss_pred HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHHHHHHHhcCCEEEEec
Q psy13453 645 EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEELGPICQEYNIWLHVDA 721 (764)
Q Consensus 645 ~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eIa~i~~~~glwLHVDa 721 (764)
...+...|++++.++ |+++|++.+++ +-+|+.+..++.+|.+-+ +.+|+++|+++|+++++|.
T Consensus 100 ~~~~~~~g~~~~~~~-------d~~~l~~~~~~-------~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De 165 (330)
T TIGR01140 100 ARAWRAAGHEVVELP-------DLDRLPAALEE-------LDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDE 165 (330)
T ss_pred HHHHHHcCCEEEEeC-------CHHHHHhhccc-------CCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEEC
Confidence 888899999988887 78999888732 126667888999999987 6667788899999999999
Q ss_pred cccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 722 AYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 722 A~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+|+.+.. .+......+ -...+-+..+++|+++.| ..+|.+
T Consensus 166 ~y~~~~~-~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~i 206 (330)
T TIGR01140 166 AFIDFTP-DASLAPQAA-RFPGLVVLRSLTKFFGLAGLRLGFV 206 (330)
T ss_pred cccccCC-ccchhhHhc-cCCCEEEEEecchhhcCchhhhhhe
Confidence 9986542 221111111 112356777999999855 445654
No 232
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=98.67 E-value=9e-07 Score=96.90 Aligned_cols=218 Identities=11% Similarity=0.032 Sum_probs=137.1
Q ss_pred HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceecc
Q psy13453 24 SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGG 98 (764)
Q Consensus 24 v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa 98 (764)
+.++++.+|+.. +.||+++++.+|+++++++|+++. +..+++.+...+++|.+-|++++++ +++++||+
T Consensus 89 ~~~~a~~~g~~~---~~i~~~~~~~~d~~~l~~~l~~~~---~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~ 162 (355)
T TIGR03301 89 LAKICEYLGIPH---TDLNFSEYEPPDLNRIEEALAADP---DITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDA 162 (355)
T ss_pred HHHHHHHcCCce---EEEecCCCCCCCHHHHHHHHHhCC---CceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEe
Confidence 467889999987 999998889999999999998642 1123345678889999999998886 88999998
Q ss_pred ccc--------------------cc-c----c-eeeeecCCCcccccccc-ccccCCc---------c--cCCCCc-ccH
Q psy13453 99 VLR--------------------RV-Y----S-SCLVPRGQKSLRTTVLF-HFLFQHW---------Q--IPLGRR-FRA 139 (764)
Q Consensus 99 ~l~--------------------~~-y----~-s~ll~rd~~~l~~~~s~-~~d~~d~---------t--le~SRr-~~A 139 (764)
... ++ + + ++++.+++ .+...... ...+.++ . ...+-. ...
T Consensus 163 ~~s~g~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ 241 (355)
T TIGR03301 163 MSSFGAIPIDIEELDVDALIASANKCLEGVPGFGFVIARRD-LLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTV 241 (355)
T ss_pred ccccCCcccchhhcCccEEEecCCcccccCCceeEEEECHH-HHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHH
Confidence 421 11 0 0 23333221 11000000 0000000 0 001111 112
Q ss_pred HHHHHHHHHccHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC--ce-eEEEEeeccccccccccccCccCCccHH
Q psy13453 140 LKLWMTLRSYGLKG-LQAYLRKHISLAKKFADLVEQDDRFELVCPPS--MG-LVCFRLKVRFWDKLDNLFGTISFGDNDL 215 (764)
Q Consensus 140 LklWatL~~lG~eG-y~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~--l~-iV~Fry~P~~~~~~~~~~~~~~~~~d~~ 215 (764)
..+..+++.+-.+| +.+..++..+.++++.+.|++. +++++.++. .. +++|+..+ . .+.-
T Consensus 242 ~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-~--------------~~~~ 305 (355)
T TIGR03301 242 YAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIVSFLYPD-D--------------PDFD 305 (355)
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCCcEEEEECCC-C--------------Ccch
Confidence 34567788887777 8889999999999999999886 788776644 22 45665421 0 0001
Q ss_pred HHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 216 NKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 216 n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
..++.++|.++|........ ....++|+++ +..+++++++.+++.|+++
T Consensus 306 ~~~~~~~l~~~gi~i~~~~~-~~~~~iRis~-~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 306 FDDFYQELKERGFVIYPGKL-TLADTFRIGT-IGEIDAADIERLLEAIKDA 354 (355)
T ss_pred HHHHHHHHHHCCEEEECCcc-ccccEEEEec-CCCCCHHHHHHHHHHHHhh
Confidence 24788889889875443321 1236899954 4457899999999999764
No 233
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=98.67 E-value=8.4e-07 Score=98.01 Aligned_cols=156 Identities=12% Similarity=-0.006 Sum_probs=108.2
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
+..+.+++.++.++ ...++|+|+++++..++.+. .. +...|+++.-+.....
T Consensus 63 ~lr~~ia~~~~~~~---------~~i~it~G~~~~l~~~~~~l----~~---------------~gd~Vlv~~p~y~~~~ 114 (351)
T PRK14807 63 KLREELARYCSVVP---------TNIFVGNGSDEIIHLIMLAF----IN---------------KGDVVIYPHPSFAMYS 114 (351)
T ss_pred HHHHHHHHHhCCCc---------ccEEEecCHHHHHHHHHHHh----cC---------------CCCEEEEeCCChHHHH
Confidence 34455566667654 25789999999876655432 11 1123555666666667
Q ss_pred HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccc
Q psy13453 646 KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAG 725 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg 725 (764)
.+++..|.+++.|+.++++.+|+++|++++++. .+-+|+.+..++.+|.+-+.+++.++|++++.++.+|.+|+.
T Consensus 115 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~-----~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~ 189 (351)
T PRK14807 115 VYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKY-----QPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFE 189 (351)
T ss_pred HHHHHcCCeEEEeecCCCCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchh
Confidence 778889999999999888899999999998642 133666678899999999999999999999999999999976
Q ss_pred cccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 726 SALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 726 ~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
.. .......+...++ --+.-++.|.++.|
T Consensus 190 ~~--~~~~~~~~~~~~~-vi~~~S~SK~~~~~ 218 (351)
T PRK14807 190 FY--GNTIVDVINEFEN-LIVLRTLSKAFGLA 218 (351)
T ss_pred hc--ccchHHHhhhCCC-EEEEecchHhcccc
Confidence 32 1111112221111 24557888988744
No 234
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=98.67 E-value=3.1e-07 Score=102.32 Aligned_cols=151 Identities=16% Similarity=0.109 Sum_probs=106.0
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|....+|+ .++++.|.+. .++++||++++..++. .+.. +..|+
T Consensus 50 ~~pt~~~le~----~la~l~g~~~-----------~~~~~sG~~ai~~~~~-----ll~~---------------Gd~Vl 94 (366)
T PRK08247 50 GNPTRGVLEQ----AIADLEGGDQ-----------GFACSSGMAAIQLVMS-----LFRS---------------GDELI 94 (366)
T ss_pred CCchHHHHHH----HHHHHhCCCc-----------EEEEcCHHHHHHHHHH-----HhCC---------------CCEEE
Confidence 3455555555 6788888753 4888999887754432 1111 11355
Q ss_pred ecCCcchh----HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSS----VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~S----v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...+.+ +.+.+...|++++.++. .|+++|+++|++. +-+|+....++.+|...++++|+++|+
T Consensus 95 ~~~~~y~~t~~~~~~~~~~~G~~v~~vd~-----~d~~~l~~~i~~~------tklv~le~P~NP~~~~~dl~~I~~la~ 163 (366)
T PRK08247 95 VSSDLYGGTYRLFEEHWKKWNVRFVYVNT-----ASLKAIEQAITPN------TKAIFIETPTNPLMQETDIAAIAKIAK 163 (366)
T ss_pred EecCCcCcHHHHHHHHhhccCceEEEECC-----CCHHHHHHhcccC------ceEEEEECCCCCCCcHHHHHHHHHHHH
Confidence 55554443 34455668888888875 3899999988654 337777788888999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~ 759 (764)
+||+|+++|.+|+......|- . ..+|-+..+++|+++.+-+
T Consensus 164 ~~g~~lIvD~t~~~~~~~~p~-~------~g~di~i~S~sK~~~g~~d 204 (366)
T PRK08247 164 KHGLLLIVDNTFYTPVLQRPL-E------EGADIVIHSATKYLGGHND 204 (366)
T ss_pred HcCCEEEEECCCccccccCch-h------cCCcEEEeecceeccCCCc
Confidence 999999999999765443321 1 2469999999999986643
No 235
>PRK06348 aspartate aminotransferase; Provisional
Probab=98.65 E-value=9.3e-07 Score=98.88 Aligned_cols=173 Identities=13% Similarity=0.079 Sum_probs=118.9
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 552 FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 552 ~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
..|........+.+.+.+|+.+..|++-+ ....++|+|+++++..++.+.. . ++
T Consensus 60 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~-------~~~i~it~G~~~al~~~~~~~~----~---------------~g 113 (384)
T PRK06348 60 TRYTDSGGDVELIEEIIKYYSKNYDLSFK-------RNEIMATVGACHGMYLALQSIL----D---------------PG 113 (384)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCC-------hhhEEEcCChHHHHHHHHHHhc----C---------------CC
Confidence 34544444567888888999887776432 2467899999998776665431 1 11
Q ss_pred eEEEecCCcchhHHHHHHhCCCceEEEecC--CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc---cHHHH
Q psy13453 632 LVAYTSDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD---NLEEL 706 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d--~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD---pl~eI 706 (764)
..|++..-++.....++...|..++.+|.+ +++.+|+++|++.+++. +-+|+.+..++.+|.+- .+++|
T Consensus 114 d~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~s~~~~~~l 187 (384)
T PRK06348 114 DEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSK------TKAIILNSPNNPTGAVFSKETLEEI 187 (384)
T ss_pred CEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcC------ccEEEEeCCCCCCCcCCCHHHHHHH
Confidence 247778888888888999999998888874 34679999999988543 22455567888899884 58888
Q ss_pred HHHHHhcCCEEEEeccccccccccchhhh--hhcCCCcccEEEEcCCccCCCC
Q psy13453 707 GPICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 707 a~i~~~~glwLHVDaA~Gg~~l~~~~~r~--~l~gie~aDSit~d~HK~l~~P 757 (764)
.++|++|++++++|.+|+....-. +... .+.+...-.-+.-++-|.++.|
T Consensus 188 ~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~~l~ 239 (384)
T PRK06348 188 AKIAIEYDLFIISDEVYDGFSFYE-DFVPMATLAGMPERTITFGSFSKDFAMT 239 (384)
T ss_pred HHHHHHCCeEEEEecccccceeCC-CccchhhcCCCcCcEEEEecchhccCCc
Confidence 899999999999999998754321 1111 1122211123445889988744
No 236
>PRK06107 aspartate aminotransferase; Provisional
Probab=98.64 E-value=6.4e-07 Score=100.86 Aligned_cols=187 Identities=13% Similarity=0.041 Sum_probs=119.1
Q ss_pred HHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhcc
Q psy13453 539 VGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQS 618 (764)
Q Consensus 539 lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~ 618 (764)
+.+.+...+......|.......++.+.+.+++.+.+|.+-. ....++|+|+++++..++.+. ..
T Consensus 51 ~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~-------~~~i~~t~G~~~al~~~~~~~----~~---- 115 (402)
T PRK06107 51 IKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYA-------DNEITVGGGAKQAIFLALMAT----LE---- 115 (402)
T ss_pred HHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCC-------hhhEEEeCCHHHHHHHHHHHh----cC----
Confidence 444555444433333444445567778888999988887431 236889999999987776421 11
Q ss_pred CCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecC--CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 619 KNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 619 ~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d--~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
++..|++++-+++....+....|..++.++++ +++.+|+++|++++.+. +-+|+.+..++.
T Consensus 116 -----------~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NP 178 (402)
T PRK06107 116 -----------AGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPR------TRWLILNAPSNP 178 (402)
T ss_pred -----------CCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcC------ceEEEEECCCCC
Confidence 12246666666555566666777777788875 34579999999987532 346777788999
Q ss_pred ccccc---cHHHHHHHHHhc-CCEEEEecccccccccc---chhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 697 TCAFD---NLEELGPICQEY-NIWLHVDAAYAGSALLL---PEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 697 ~GaiD---pl~eIa~i~~~~-glwLHVDaA~Gg~~l~~---~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+|.+- .+++|+++|++| ++|+++|-+|+-...-. +.......++..---+..+++|.++.|
T Consensus 179 tG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~p 246 (402)
T PRK06107 179 TGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMT 246 (402)
T ss_pred CCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCc
Confidence 99774 677788889998 99999999997532211 111111122211123345779988644
No 237
>PRK08636 aspartate aminotransferase; Provisional
Probab=98.64 E-value=2.1e-06 Score=96.70 Aligned_cols=179 Identities=15% Similarity=0.173 Sum_probs=120.7
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCC-cEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccC
Q psy13453 552 FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPG-GGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRN 630 (764)
Q Consensus 552 ~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~-~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~ 630 (764)
..|........+-+.+.+|+.+..|++-+ .. ..++|+|++++...++.+.. . +
T Consensus 65 ~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~-------~~~~I~it~G~~~al~~~~~~l~----~---------------~ 118 (403)
T PRK08636 65 HGYSVSKGIYKLRLAICNWYKRKYNVDLD-------PETEVVATMGSKEGYVHLVQAIT----N---------------P 118 (403)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCC-------CCCeEEECCChHHHHHHHHHHhC----C---------------C
Confidence 34444445567888888999888886532 12 47899999998766654321 1 1
Q ss_pred ceEEEecCCcchhHHHHHHhCCCceEEEecC--CCCcccHHHHHHHHHHhhhc-CCCceEEEEeeccCCcccc---ccHH
Q psy13453 631 KLVAYTSDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAK-GLIPCCLIATLGTTGTCAF---DNLE 704 (764)
Q Consensus 631 ~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d--~~g~md~~~Le~~I~~~~~~-G~~p~~VvataGTT~~Gai---Dpl~ 704 (764)
+..|++.+-+......++...|.+++.||++ +++.+|+++|.+.+++..++ +.++.+|+.+..++.||.+ +.++
T Consensus 119 gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~ 198 (403)
T PRK08636 119 GDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYE 198 (403)
T ss_pred CCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHH
Confidence 2357777777777888889999999999985 45789999876666554332 2346788888888999988 4567
Q ss_pred HHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcc-c-EE-EEcCCccCCCC
Q psy13453 705 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYV-D-SF-DFNTHKWLLVN 757 (764)
Q Consensus 705 eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~a-D-Si-t~d~HK~l~~P 757 (764)
+|+++|++|++|+++|-+|+-...--... ..+..+... | .| +-++.|.++.|
T Consensus 199 ~l~~~a~~~~~~II~De~Y~~l~~~~~~~-~~~~~~~~~~~~~i~~~S~SK~~~~~ 253 (403)
T PRK08636 199 RLVALAKKERFYIISDIAYADITFDGYKT-PSILEVEGAKDVAVESYTLSKSYNMA 253 (403)
T ss_pred HHHHHHHHcCcEEEEeccchhhccCCCCC-CChhcCCCccccEEEEEecccccCCc
Confidence 78888999999999999998643211011 111222211 2 23 45899998644
No 238
>PRK07568 aspartate aminotransferase; Provisional
Probab=98.63 E-value=1e-06 Score=98.72 Aligned_cols=176 Identities=16% Similarity=0.144 Sum_probs=108.1
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 554 WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
|.......++.+.+.+++.. .|.+-+ ....++|+|+|+++..++.+. .. +...
T Consensus 62 Y~~~~g~~~lr~~ia~~~~~-~~~~~~-------~~~i~~t~G~~~al~~~~~~l----~~---------------~gd~ 114 (397)
T PRK07568 62 YSHSQGIPELREAFAKYYKK-WGIDVE-------PDEILITNGGSEAILFAMMAI----CD---------------PGDE 114 (397)
T ss_pred cCCCCCCHHHHHHHHHHHHH-hCCCCC-------cceEEEcCChHHHHHHHHHHh----cC---------------CCCE
Confidence 33333445555555555542 333211 135789999999987765432 11 1123
Q ss_pred EEecCCcchhHHHHHHhCCCceEEEecC-CCC-c-ccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc---cHHHHH
Q psy13453 634 AYTSDQSNSSVEKSAIIGDVPVRQLRSD-DNG-V-LRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD---NLEELG 707 (764)
Q Consensus 634 i~~S~~aH~Sv~kAa~~lGl~v~~Vp~d-~~g-~-md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD---pl~eIa 707 (764)
|++++-.+......++..|++++.|+.+ ++| . .++++|++++++. +-+|+.+..++.+|.+- ++++|+
T Consensus 115 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~------~~~v~i~~p~NPtG~~~~~~~~~~i~ 188 (397)
T PRK07568 115 ILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPK------TKAILISNPGNPTGVVYTKEELEMLA 188 (397)
T ss_pred EEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCcc------ceEEEEECCCCCCCccCCHHHHHHHH
Confidence 5555555555556677889999999986 344 3 3578998888543 33677777889999875 588999
Q ss_pred HHHHhcCCEEEEeccccccccccchhhhh--hcCCCcccEEEEcCCccCCCC-cCcee
Q psy13453 708 PICQEYNIWLHVDAAYAGSALLLPEYAHL--KRGLEYVDSFDFNTHKWLLVN-FDCSA 762 (764)
Q Consensus 708 ~i~~~~glwLHVDaA~Gg~~l~~~~~r~~--l~gie~aDSit~d~HK~l~~P-~~~g~ 762 (764)
++|+++|+|+++|.+|+....-.+..... +.+...---+.-+++|.++.| .-+|.
T Consensus 189 ~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~ 246 (397)
T PRK07568 189 EIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGC 246 (397)
T ss_pred HHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEE
Confidence 99999999999999998753211111111 112110113445889988743 33444
No 239
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.63 E-value=4.4e-07 Score=103.01 Aligned_cols=152 Identities=14% Similarity=0.106 Sum_probs=111.2
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|-...+|+ .++++.|.. ..+.|++|+.|+.+++.+.. + +...|+
T Consensus 59 ~nPtv~~lE~----~la~leg~~-----------~av~~~SG~aAi~~al~all----~---------------~GD~VI 104 (432)
T PRK06702 59 GNPTLAAFEQ----KLAELEGGV-----------GAVATASGQAAIMLAVLNIC----S---------------SGDHLL 104 (432)
T ss_pred CCcHHHHHHH----HHHHHhCCC-----------cEEEECCHHHHHHHHHHHhc----C---------------CCCEEE
Confidence 3677777887 456666543 36889999999988887441 1 122577
Q ss_pred ecCCcchhHHHH----HHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~Sv~kA----a~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++.....+.... ...+|+.++.+. ..+|+++++++|++.++ +|++...++.++.+-||++|+++|+
T Consensus 105 ~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd----~~~d~~~l~~~I~~~Tk------~I~~e~pgnP~~~v~Di~~I~~iA~ 174 (432)
T PRK06702 105 CSSTVYGGTFNLFGVSLRKLGIDVTFFN----PNLTADEIVALANDKTK------LVYAESLGNPAMNVLNFKEFSDAAK 174 (432)
T ss_pred ECCCchHHHHHHHHHHHHHCCCEEEEEC----CCCCHHHHHHhCCcCCe------EEEEEcCCCccccccCHHHHHHHHH
Confidence 788776544443 567899888874 35899999999977543 6666778888999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~ 758 (764)
++|+++.+|.+|+...+.-| +. . .||-+.-+..||++..-
T Consensus 175 ~~gi~livD~T~~tP~~~~p-l~---~---GADIvv~S~TKy~~Ghs 214 (432)
T PRK06702 175 ELEVPFIVDNTLATPYLCQA-FE---H---GANIIVHSTTKYIDGHA 214 (432)
T ss_pred HcCCEEEEECCCCchhhCCh-hh---c---CCCEEEEccccccCCCc
Confidence 99999999999975433222 11 2 36999999999887653
No 240
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=98.63 E-value=4.5e-07 Score=101.70 Aligned_cols=152 Identities=15% Similarity=0.122 Sum_probs=106.3
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|....+|+ +++++.|- + ..++|+||++++..++.+. .. ++..|+
T Consensus 49 ~~p~~~~le~----~lA~l~g~-~----------~v~~~~gg~~Ai~~~l~al----l~---------------~GD~Vl 94 (382)
T TIGR02080 49 GNPTRDLLQQ----ALAELEGG-A----------GAVVTNTGMSAIHLVTTAL----LG---------------PDDLLV 94 (382)
T ss_pred CCchHHHHHH----HHHHHhCC-C----------cEEEEcCHHHHHHHHHHHH----cC---------------CCCEEE
Confidence 4455555555 77777773 2 4789999999887766543 11 122467
Q ss_pred ecCCcchhHHHHH----HhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~Sv~kAa----~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...+.+..... ...|+.+..++. .|+++++++|++. +-+|+.+..++.+|.+-|+++|+++|+
T Consensus 95 ~~~p~y~~~~~~~~~~~~~~~~~v~~~d~-----~d~~~l~~ai~~~------tklV~l~~p~NPtG~~~dl~~I~~la~ 163 (382)
T TIGR02080 95 APHDCYGGTYRLLNALAKKGCFRVLFVDQ-----GDEQALRAALAQK------PKLVLIETPSNPLLRVVDIAKICHLAK 163 (382)
T ss_pred EcCCCcHHHHHHHHHHHhhcCeEEEEECC-----CCHHHHHHhcCcC------ceEEEEECCCCCCCEecCHHHHHHHHH
Confidence 7777776544332 223455555432 3789999988653 347888889999999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~ 759 (764)
++|+++.||.+|+.+....+ .. . .+|-+..++|||++.+.+
T Consensus 164 ~~g~~vvvD~a~~~~~~~~p-l~---~---gaDivv~S~sK~l~G~~~ 204 (382)
T TIGR02080 164 AVGAVVVVDNTFLSPALQNP-LA---L---GADLVLHSCTKYLNGHSD 204 (382)
T ss_pred HcCCEEEEECCCcccccCCc-hh---h---CCCEEEeecceeccCCCC
Confidence 99999999999976543222 11 1 359999999999987755
No 241
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=98.63 E-value=4.1e-07 Score=101.03 Aligned_cols=212 Identities=12% Similarity=0.002 Sum_probs=142.0
Q ss_pred eeeeHH----HHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----
Q psy13453 20 LIYESF----KATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS----- 90 (764)
Q Consensus 20 ~~YSv~----KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~----- 90 (764)
-|+|.. .+++..|+.. +.||.+.++.+|+++++++|+++ +-+++-|.-.+.+|...|+++|++
T Consensus 97 ~~~s~~~~~~~~~~~~g~~v---~~i~~~~~~~~~~~~~~~~l~~~-----~~lv~~~~~~~~tG~~~pi~~I~~~~~~~ 168 (371)
T PF00266_consen 97 EHPSNRYPWEEIAKRKGAEV---RVIPADPGGSLDLEDLEEALNPD-----TRLVSISHVENSTGVRNPIEEIAKLAHEY 168 (371)
T ss_dssp SHHHHHHHHHHHHHHTTEEE---EEEEEGTTSSCSHHHHHHHHHTT-----ESEEEEESBETTTTBBSSHHHHHHHHHHT
T ss_pred cccccccccccccccchhhh---ccccccccchhhhhhhhhhhccc-----cceEEeecccccccEEeeeceehhhhhcc
Confidence 456655 5566778776 89999999999999999999753 235568888899999999999996
Q ss_pred CCCceecccc--------------------ccccc-----eeeeecCCCccccc--cccccc-------------cCCcc
Q psy13453 91 NGPLKVGGVL--------------------RRVYS-----SCLVPRGQKSLRTT--VLFHFL-------------FQHWQ 130 (764)
Q Consensus 91 ~~wlHVDa~l--------------------~~~y~-----s~ll~rd~~~l~~~--~s~~~d-------------~~d~t 130 (764)
+++++|||.. .|+++ ++++++++. +... ...... -..+.
T Consensus 169 ~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~~Kl~gp~G~g~l~v~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 247 (371)
T PF00266_consen 169 GALLVVDAAQSAGCVPIDLDELGADFLVFSSHKLGGPPGLGFLYVRPEA-IERLRPAKPGGGYLDFPSLQEYGLADDARR 247 (371)
T ss_dssp TSEEEEE-TTTTTTSS--TTTTTESEEEEESTSTTSSSTEEEEEEEHHH-HHHHHTSSSSSSTTTHHHHHHHCHHSTTTG
T ss_pred CCceeEechhccccccccccccccceeeecccccCCCCchhhheehhhh-hhccccccccccccccccchhccccccccc
Confidence 8899999942 12221 355555411 1110 000000 01112
Q ss_pred cC-CCCccc-HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC----CCceeEEEEeecccccccccc
Q psy13453 131 IP-LGRRFR-ALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCP----PSMGLVCFRLKVRFWDKLDNL 204 (764)
Q Consensus 131 le-~SRr~~-ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~----P~l~iV~Fry~P~~~~~~~~~ 204 (764)
++ |+.... .+.+..+++.+-..|..++-++..++++++.+.|++.++++++++ ...++++|.+..
T Consensus 248 ~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~--------- 318 (371)
T PF00266_consen 248 FEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPG--------- 318 (371)
T ss_dssp SSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETT---------
T ss_pred ccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecC---------
Confidence 22 233222 246677888888899999999999999999999999999999772 346789998731
Q ss_pred ccCccCCccHHHHHHHHHHHhcCcEEEEeceeC--------CeeEEEEeccCCCCCHHHHHHH
Q psy13453 205 FGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQ--------DRLFMRFAICSSQTEESDVQLG 259 (764)
Q Consensus 205 ~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~--------g~~~LRi~v~np~Tt~e~i~~~ 259 (764)
.+. ..+.+.|.++|.......... -..++|++ .++.+|++||++|
T Consensus 319 -------~~~--~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS-~~~~nt~~dv~~l 371 (371)
T PF00266_consen 319 -------SDA--DDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVS-LHYYNTEEDVDRL 371 (371)
T ss_dssp -------SSH--HHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE--GTTSSHHHHHHH
T ss_pred -------CCH--HHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEe-ccCCCCHHHHhhC
Confidence 111 578888888876444311111 12689997 7777889999875
No 242
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=98.62 E-value=2e-06 Score=95.87 Aligned_cols=229 Identities=9% Similarity=0.007 Sum_probs=139.0
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC--CCCcccHHHHHHHHHHHhhCC-CCc-EEEEeeCCcccccccCchhhhc-----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP--DSEWLAYLTLRTIYESFRKSF-LCP-MCSGYCGRTLHQDIQSLNAPVS----- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd--~~~rmD~~aLe~~I~~~~~~G-~~p-~~VatAGTT~~G~iDpi~~ia~----- 90 (764)
.|||...+++..|... +.+|.+ +++++|+++|+++|++.+..+ ..+ +++-+.++.++|.+.|++++++
T Consensus 99 ~h~s~~~~~~~~g~~~---~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~ 175 (370)
T TIGR02539 99 AHYTSYVAAERAGLNV---KEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREK 175 (370)
T ss_pred ccHHHHHHHHHcCCEE---EEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHc
Confidence 6899999999999877 889986 468999999999997643211 123 4456778899999999999886
Q ss_pred CCCceecccccccc------------------------c--eeeeecCCCccccc--cccccccCCc-ccCCCC-cccHH
Q psy13453 91 NGPLKVGGVLRRVY------------------------S--SCLVPRGQKSLRTT--VLFHFLFQHW-QIPLGR-RFRAL 140 (764)
Q Consensus 91 ~~wlHVDa~l~~~y------------------------~--s~ll~rd~~~l~~~--~s~~~d~~d~-tle~SR-r~~AL 140 (764)
+.+++||+++.... + +|+..+. +..... ....+++... .+.++. ...+.
T Consensus 176 ~~~livDea~~~g~~~~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~-~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (370)
T TIGR02539 176 GVPLLLNCAYTVGRMPVSAKEIGADFIVGSGHKSMAASGPCGVLGMSE-EWEDIVLRKSRYSPVKEVELLGCTSRGAPIV 254 (370)
T ss_pred CCeEEEECccccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECH-HHHhhhcccccCCccceeeeecccccccHHH
Confidence 88999999642110 0 1222111 000000 0000001110 011122 22333
Q ss_pred HHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe--CCCCceeEEEEeeccccccccccccCccCCccHHHHH
Q psy13453 141 KLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELV--CPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKA 218 (764)
Q Consensus 141 klWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell--~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~ 218 (764)
.+++++... ..+.+..++.++.+++|++.|++. +|+++ .++..+++.|+.. ..... ..+.++-...
T Consensus 255 ~~~~al~~~--~~~l~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~--~~~~~-------~~~~~~~~~~ 322 (370)
T TIGR02539 255 TMMASFPHV--VERVKRWDEEVKKTRWFVAELEDI-GFIQLGQKPKEHDLVKFETP--GFHEI-------AQKHKRRGYF 322 (370)
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhC-CcEEEccCCCcCceEEEECC--chhHH-------hhhhccccHH
Confidence 445555322 334455566778889999999987 78875 3677888888642 11000 0000111257
Q ss_pred HHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 219 VYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 219 L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
+.++|.++|...+.. ....++|++++ ..++++++.+++.|+++.++
T Consensus 323 ~~~~L~e~GI~~ir~---~~~~~iRis~~--~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 323 LYEELKKRGIHGIRS---GQTKYFKLSVY--GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred HHHHHHhCCCccccC---CcceEEEEEec--CCCHHHHHHHHHHHHHHHHh
Confidence 889999999741221 22358999873 34899999999999887644
No 243
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=98.62 E-value=1.4e-06 Score=98.03 Aligned_cols=157 Identities=13% Similarity=0.087 Sum_probs=103.6
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
++-+.+++++|.++ .++.++|+.+|+.++.+. .. +...|++++..|.|+.
T Consensus 47 ~LE~~lA~~~g~e~-----------al~~~sG~~a~~~~i~~l----~~---------------~GD~Vl~~~~~h~s~~ 96 (392)
T PLN03227 47 ELEQCMAEFLGTES-----------AILYSDGASTTSSTVAAF----AK---------------RGDLLVVDRGVNEALL 96 (392)
T ss_pred HHHHHHHHHhCCCc-----------EEEecCcHHHHHHHHHHh----CC---------------CCCEEEEeccccHHHH
Confidence 34446677777653 467777788887655542 11 1236889999999999
Q ss_pred HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhh--------cCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEE
Q psy13453 646 KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLA--------KGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWL 717 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~--------~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwL 717 (764)
.++.+.+.+++.++.+ |++++++.++.... ....+.+|+.-.-.+..|.+-|+++|.++|++||+++
T Consensus 97 ~~~~l~~~~~~~~~~~-----d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~l 171 (392)
T PLN03227 97 VGVSLSRANVRWFRHN-----DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRL 171 (392)
T ss_pred HHHHHcCCeEEEeCCC-----CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEE
Confidence 9888888777666543 34555554433221 1123455665555667899999999999999999999
Q ss_pred EEeccccccccccch--hhhh---hcCCCcccEEEEcCCccCCCCcC
Q psy13453 718 HVDAAYAGSALLLPE--YAHL---KRGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 718 HVDaA~Gg~~l~~~~--~r~~---l~gie~aDSit~d~HK~l~~P~~ 759 (764)
++|.+|+.+.+ .+. .... +.....+|-++.+.+|.++ |.+
T Consensus 172 ivDe~~~~g~~-g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-~~g 216 (392)
T PLN03227 172 ILDESFSFGTL-GKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-SVG 216 (392)
T ss_pred EEECccccccc-CCCCCcHHHHcCCCCCCCceEEEeechhhhh-ccC
Confidence 99999983322 111 1111 1223457999999999876 443
No 244
>PLN02368 alanine transaminase
Probab=98.62 E-value=1.2e-06 Score=99.19 Aligned_cols=150 Identities=15% Similarity=0.138 Sum_probs=111.4
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCce
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKL 632 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~ 632 (764)
.|..+.....+-+.+.+|+.+..|++-+ ....++|+|++++...++.+... . ++.
T Consensus 102 ~Y~~~~G~~~LR~aia~~~~~~~g~~~~-------~~~I~it~Ga~~al~~~~~~l~~---~---------------pGd 156 (407)
T PLN02368 102 AYSDSRGLPGVRKEVAEFIERRDGYPSD-------PELIFLTDGASKGVMQILNAVIR---G---------------EKD 156 (407)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCC-------hhhEEEcccHHHHHHHHHHHHcC---C---------------CCC
Confidence 4544445567888888999888786432 23688999999987666654310 0 112
Q ss_pred EEEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHHH
Q psy13453 633 VAYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEELG 707 (764)
Q Consensus 633 vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eIa 707 (764)
.|++.+=+.......+...|.+++.||+++ ++.+|+++|++.+++...++..+-+|+.+..++.||.+ +.+++|+
T Consensus 157 ~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~ 236 (407)
T PLN02368 157 GVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREIL 236 (407)
T ss_pred EEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHH
Confidence 466667777778888899999999999874 47899999999998654444445677778889999988 5667778
Q ss_pred HHHHhcCCEEEEeccccccc
Q psy13453 708 PICQEYNIWLHVDAAYAGSA 727 (764)
Q Consensus 708 ~i~~~~glwLHVDaA~Gg~~ 727 (764)
++|++||+|+..|-+|+-..
T Consensus 237 ~~a~~~~~~II~DE~Y~~l~ 256 (407)
T PLN02368 237 KFCYQERLVLLGDEVYQQNI 256 (407)
T ss_pred HHHHHcCCEEEEEccccccc
Confidence 88999999999999998754
No 245
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=98.62 E-value=9.9e-07 Score=97.09 Aligned_cols=151 Identities=15% Similarity=0.011 Sum_probs=108.6
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
++.+++++.++.+++ ..++|+|+++++.+++.+..+ ++..|++.+-++....
T Consensus 64 ~lr~aia~~~~~~~~---------~I~it~G~~~al~~~~~~l~~-------------------~gd~vlv~~P~y~~~~ 115 (353)
T PRK05387 64 ALRQAIAAYYGLDPE---------QVFVGNGSDEVLAHAFLAFFN-------------------HDRPLLFPDITYSFYP 115 (353)
T ss_pred HHHHHHHHHhCCCHH---------HEEEcCCHHHHHHHHHHHhcC-------------------CCCEEEEeCCCHHHHH
Confidence 567777888887653 689999999998776654311 1124666766666666
Q ss_pred HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc-CCEEEEecccc
Q psy13453 646 KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY-NIWLHVDAAYA 724 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~-glwLHVDaA~G 724 (764)
..+...|++++.+|.++++.+|+++|++ . ..+|+.+..++.||.+-+.+++.++++.+ ++|+++|.+|.
T Consensus 116 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~----~------~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~ 185 (353)
T PRK05387 116 VYAGLYGIPYEEIPLDDDFSIDVEDYLR----P------NGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYV 185 (353)
T ss_pred HHHHHcCCEEEEeecCCCCCCCHHHHHh----c------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCccc
Confidence 6688899999999999889999999863 1 12677788899999999999999999886 99999999985
Q ss_pred ccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 725 GSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 725 g~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
-+. ...........++ .-+..++.|.++.|
T Consensus 186 ~~~--~~~~~~~~~~~~~-~i~~~S~SK~~~~~ 215 (353)
T PRK05387 186 DFG--GESAIPLIDRYPN-LLVVQTFSKSRSLA 215 (353)
T ss_pred ccC--CcchHHHHhhCCC-EEEEEehhHhhcch
Confidence 421 1111111111122 46777999988755
No 246
>PRK09265 aminotransferase AlaT; Validated
Probab=98.62 E-value=8.8e-07 Score=99.74 Aligned_cols=140 Identities=13% Similarity=0.094 Sum_probs=100.8
Q ss_pred cccCCchHHHHHHHHHHHHHHHc--CCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccC
Q psy13453 553 SWLSSPACTELEVLVMNWLGKAL--GLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRN 630 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~ll--G~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~ 630 (764)
.|........+-+.+.+|+...- +.++ ...++|+|+++++..++.+. .. +
T Consensus 67 ~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~---------~~i~~t~G~~~~l~~~~~~~----~~---------------~ 118 (404)
T PRK09265 67 GYSDSKGLFSARKAIMQYYQQKGIPDVDV---------DDIYIGNGVSELIVMAMQAL----LN---------------N 118 (404)
T ss_pred CCCCCCCcHHHHHHHHHHHhccCCCCCCc---------ccEEEeCChHHHHHHHHHHh----CC---------------C
Confidence 34433333455555555554321 3333 35788999999876665432 11 1
Q ss_pred ceEEEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHH
Q psy13453 631 KLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEE 705 (764)
Q Consensus 631 ~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~e 705 (764)
+..|++++-+|.....++...|.+++.+++|. ++.+|+++|++.+.+. +-+|+.+..++.+|.+-+ +++
T Consensus 119 gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPtG~~~~~~~~~~ 192 (404)
T PRK09265 119 GDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPR------TKAIVIINPNNPTGAVYSKELLEE 192 (404)
T ss_pred CCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhcccc------ceEEEEECCCCCCCcCCCHHHHHH
Confidence 22477888999999999988999988888863 4679999999987543 336777788999999877 889
Q ss_pred HHHHHHhcCCEEEEecccccc
Q psy13453 706 LGPICQEYNIWLHVDAAYAGS 726 (764)
Q Consensus 706 Ia~i~~~~glwLHVDaA~Gg~ 726 (764)
|+++|++||+++++|.+|+..
T Consensus 193 i~~~a~~~~~~ii~De~y~~~ 213 (404)
T PRK09265 193 IVEIARQHNLIIFADEIYDKI 213 (404)
T ss_pred HHHHHHHCCCEEEEehhhhhc
Confidence 999999999999999999864
No 247
>PRK08068 transaminase; Reviewed
Probab=98.62 E-value=1.7e-06 Score=96.79 Aligned_cols=186 Identities=12% Similarity=0.022 Sum_probs=120.9
Q ss_pred HHHHHHhhccc-CccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCC-cEEEeCChHHHHHHHHHHHHHHHhhhhc
Q psy13453 540 GDMLSGAFGLI-GFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPG-GGIIQSTASEATLVSILVAKRKMINHWQ 617 (764)
Q Consensus 540 ad~l~~~lN~n-~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~-~GvfTsGgTeANl~Al~aAR~~~~~~~~ 617 (764)
.+.+...++.. ...|...+....+.+.+.+|+.+..|.+-+ .. ..++|+|++++...++.+. ..
T Consensus 51 ~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~-------~~~~i~it~G~~~~l~~~~~~~----~~--- 116 (389)
T PRK08068 51 VEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLD-------PETEVAILFGGKAGLVELPQCL----MN--- 116 (389)
T ss_pred HHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-------CCccEEEcCCcHHHHHHHHHHh----CC---
Confidence 44444444432 223434455677888888888877776432 12 4678999998876654321 11
Q ss_pred cCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccC
Q psy13453 618 SKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTT 695 (764)
Q Consensus 618 ~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT 695 (764)
+...|++.+-++.....++...|++++.+|+++ .+.+|+++|++.+.+. +-+|+.+..++
T Consensus 117 ------------~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~N 178 (389)
T PRK08068 117 ------------PGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEK------AKLMYLNYPNN 178 (389)
T ss_pred ------------CCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhcccc------ceEEEEECCCC
Confidence 122577788888888888999999999999974 3578999999888542 33666667889
Q ss_pred CccccccH---HHHHHHHHhcCCEEEEeccccccccccchhhhhhc--CCCcccEEEEcCCccCCCC
Q psy13453 696 GTCAFDNL---EELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKR--GLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 696 ~~GaiDpl---~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~--gie~aDSit~d~HK~l~~P 757 (764)
.||.+=+. ++|.++|++|++|+++|-||+-...-.......+. +...-.-+.-++-|.++.|
T Consensus 179 PTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~ 245 (389)
T PRK08068 179 PTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMA 245 (389)
T ss_pred CCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCc
Confidence 99998655 57777899999999999999753221101001111 1111123556889988654
No 248
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=98.61 E-value=1.7e-06 Score=95.80 Aligned_cols=198 Identities=16% Similarity=0.045 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccc
Q psy13453 502 WRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEF 581 (764)
Q Consensus 502 ~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~ 581 (764)
.++.+..+++.+..+-... --.|+|.-.. +.....+.+.+..+ + ....+.+++.+++++++|.+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~-~~~ylgl~~~-~~~~~~~~~~~~~~----~-------g~~~~~~~Le~~lA~~~g~~~e- 72 (346)
T TIGR03576 7 REKALEIIREKISRGGRDS-LYDLTGLAGG-FKIDEEDLELLETY----V-------GPAIFEEKVQELGREHLGGPEE- 72 (346)
T ss_pred HHHHHHHHHHHHhccCCcc-ccccccCCCC-hhHHHHHHHHHHHh----c-------CCHHHHHHHHHHHHHHcCCCcc-
Confidence 4677788888776553321 1134444322 22222233333332 1 2347888888999999999653
Q ss_pred cCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE--ecCCcchhHHHHHHhCCCceEEEe
Q psy13453 582 LNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY--TSDQSNSSVEKSAIIGDVPVRQLR 659 (764)
Q Consensus 582 ~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~--~S~~aH~Sv~kAa~~lGl~v~~Vp 659 (764)
..++++||+++|+.++.+..+ . ++.+++ .....|.++..++++.|.++...
T Consensus 73 --------~ilv~~gg~~a~~~~~~al~~----~--------------gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~- 125 (346)
T TIGR03576 73 --------KILVFNRTSSAILATILALEP----P--------------GRKVVHYLPEKPAHPSIPRSCKLAGAEYFES- 125 (346)
T ss_pred --------eEEEECCHHHHHHHHHHHhCC----C--------------CCEEEECCCCCCCchhHHHHHHHcCCEEecc-
Confidence 578999999999887764321 0 122333 22569999999999999865322
Q ss_pred cCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHHHHHHHhcCCEEEEecccccccccc-chhhh
Q psy13453 660 SDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEELGPICQEYNIWLHVDAAYAGSALLL-PEYAH 735 (764)
Q Consensus 660 ~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~-~~~r~ 735 (764)
.++++|+ .. . .+-+|+.| |++..|.+ .||++|+++|++||+|+.||-||+.+.... .....
T Consensus 126 ------~~l~~l~----~~-~---~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~ 190 (346)
T TIGR03576 126 ------DELSELK----KI-D---GTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPA 190 (346)
T ss_pred ------CCHHHHh----hC-c---CceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCH
Confidence 1344432 11 1 13345554 56778888 899999999999999999999999764321 11000
Q ss_pred hhcCCCcccEEEEcCCccCCCCc
Q psy13453 736 LKRGLEYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 736 ~l~gie~aDSit~d~HK~l~~P~ 758 (764)
.-. .+|-+..+++|++..+.
T Consensus 191 ~~~---~~divv~s~SKalaG~r 210 (346)
T TIGR03576 191 LDL---GADLVVTSTDKLMDGPR 210 (346)
T ss_pred HHc---CCcEEEeccchhccccc
Confidence 011 25888899999774443
No 249
>PLN02231 alanine transaminase
Probab=98.60 E-value=2e-06 Score=100.37 Aligned_cols=152 Identities=15% Similarity=0.137 Sum_probs=115.3
Q ss_pred CccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccC
Q psy13453 551 GFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRN 630 (764)
Q Consensus 551 ~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~ 630 (764)
...|..+.....+-+.+.+|+.+..|++-+ ....++|+|+++++.+++.+... + +
T Consensus 161 ~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~-------pe~I~iT~Ga~~ai~~~~~~l~~---~---------------~ 215 (534)
T PLN02231 161 TGAYSHSQGIKGLRDAIAAGIEARDGFPAD-------PNDIFLTDGASPAVHMMMQLLIR---S---------------E 215 (534)
T ss_pred ccCcCCCCCcHHHHHHHHHHHHhccCCCCC-------cccEEEeCCHHHHHHHHHHHhcc---C---------------C
Confidence 345666667778888888888887776542 24688999999998776654321 0 1
Q ss_pred ceEEEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHH
Q psy13453 631 KLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEE 705 (764)
Q Consensus 631 ~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~e 705 (764)
+..|++..=+......++...|..++.+|.++ ++.+|+++|++++++...++..+-+|+.+..++.||.+ +.+++
T Consensus 216 gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~ 295 (534)
T PLN02231 216 KDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRD 295 (534)
T ss_pred CCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHH
Confidence 12356666667777778888999999999985 36899999999998766666556566667778899988 57788
Q ss_pred HHHHHHhcCCEEEEeccccccc
Q psy13453 706 LGPICQEYNIWLHVDAAYAGSA 727 (764)
Q Consensus 706 Ia~i~~~~glwLHVDaA~Gg~~ 727 (764)
|+++|++||+|+..|-+|.-..
T Consensus 296 Iv~~a~~~~l~lI~DEvY~~l~ 317 (534)
T PLN02231 296 IVEFCKQEGLVLLADEVYQENV 317 (534)
T ss_pred HHHHHHHcCCEEEEEccchhcc
Confidence 8999999999999999998753
No 250
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=98.60 E-value=8.8e-07 Score=103.18 Aligned_cols=139 Identities=11% Similarity=0.046 Sum_probs=101.5
Q ss_pred ccCCchHHHHHHHHHHHHHHHcC--CCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 554 WLSSPACTELEVLVMNWLGKALG--LPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG--~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
|..+.....+-+.+.+++.+..+ +++ ...++|+|++++...++.+. .. ++
T Consensus 181 Y~~~~G~~~lReaia~~~~~~~~~~~~~---------~~I~it~G~~eal~~~~~~l----~~---------------~G 232 (517)
T PRK13355 181 YSDSKGLFSARKAIMQYAQLKGLPNVDV---------DDIYTGNGVSELINLSMSAL----LD---------------DG 232 (517)
T ss_pred CCCCcChHHHHHHHHHHHHhcCCCCCCh---------hHEEEeCcHHHHHHHHHHHh----CC---------------CC
Confidence 33333344555555566644322 222 36789999999877766532 11 12
Q ss_pred eEEEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHH
Q psy13453 632 LVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEEL 706 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eI 706 (764)
..|+++.-++.....++...|.+++.+++++ ++.+|+++|++++.+. +-+|+.+..++.||.+-+ +++|
T Consensus 233 d~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~------~k~i~i~nP~NPTG~v~~~~~l~~i 306 (517)
T PRK13355 233 DEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSR------TKAIVIINPNNPTGALYPREVLQQI 306 (517)
T ss_pred CEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcC------ceEEEEECCCCCCCcCcCHHHHHHH
Confidence 2477788888888888999999999999874 4789999999988653 337777788999999866 8889
Q ss_pred HHHHHhcCCEEEEecccccc
Q psy13453 707 GPICQEYNIWLHVDAAYAGS 726 (764)
Q Consensus 707 a~i~~~~glwLHVDaA~Gg~ 726 (764)
+++|++|++|+++|.+|.-.
T Consensus 307 ~~~a~~~~~~ii~DE~Y~~~ 326 (517)
T PRK13355 307 VDIAREHQLIIFSDEIYDRL 326 (517)
T ss_pred HHHHHHcCcEEEEehhhhhh
Confidence 99999999999999999854
No 251
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=98.60 E-value=2e-06 Score=96.09 Aligned_cols=168 Identities=17% Similarity=0.104 Sum_probs=111.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecC
Q psy13453 559 ACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSD 638 (764)
Q Consensus 559 ~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~ 638 (764)
....+-+.+.+|+.+.+|.+-+ .....++|+|++++...++.+. .. +...|++.+
T Consensus 70 G~~~lr~aia~~~~~~~g~~~~------~~~~ii~t~G~~~~i~~~~~~~----~~---------------~gd~Vl~~~ 124 (385)
T PRK09276 70 GMLEFRKAVADWYKRRFGVELD------PETEVISLIGSKEGIAHIPLAF----VN---------------PGDVVLVPD 124 (385)
T ss_pred CcHHHHHHHHHHHHHHhCCCCC------CCCcEEEccCcHHHHHHHHHHh----CC---------------CCCEEEEcC
Confidence 3456777788888877776432 0113677899999876655432 11 122466677
Q ss_pred CcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHHHHHHHhc
Q psy13453 639 QSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEELGPICQEY 713 (764)
Q Consensus 639 ~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eIa~i~~~~ 713 (764)
-+......+++..|.+++.+|.+. .+.+|++++++.+.+. +-+|+.+..++.||.+-+ +++|+++|++|
T Consensus 125 P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~ 198 (385)
T PRK09276 125 PGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKK------AKLMFINYPNNPTGAVADLEFFEEVVDFAKKY 198 (385)
T ss_pred CCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcccc------ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHC
Confidence 777777888889999999999864 3568999998877542 336777778899999865 68888899999
Q ss_pred CCEEEEeccccccccccchhhhh--hcCCCcccEEEEcCCccCCCC
Q psy13453 714 NIWLHVDAAYAGSALLLPEYAHL--KRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 714 glwLHVDaA~Gg~~l~~~~~r~~--l~gie~aDSit~d~HK~l~~P 757 (764)
|+|+++|-+|+....-....... +.+...-.-..-++-|.++.|
T Consensus 199 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 244 (385)
T PRK09276 199 DIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMT 244 (385)
T ss_pred CcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCc
Confidence 99999999998643211000110 111111123456788988644
No 252
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=98.57 E-value=1.8e-06 Score=95.67 Aligned_cols=225 Identities=10% Similarity=0.037 Sum_probs=142.5
Q ss_pred eeeH--HHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCC
Q psy13453 21 IYES--FKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 21 ~YSv--~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
+|+. .+++...|+.. +.||+++++.+|+++|+++|++.. +.-++..+...+++|.+-|++++++ +++
T Consensus 90 ~~~~~~~~~~~~~g~~~---~~i~~~~~~~~d~~~l~~~l~~~~---~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~ 163 (368)
T PRK13479 90 AYGARIAQIAEYLGIAH---VVLDTGEDEPPDAAEVEAALAADP---RITHVALVHCETTTGILNPLDEIAAVAKRHGKR 163 (368)
T ss_pred chHHHHHHHHHHcCCcE---EEEECCCCCCCCHHHHHHHHHhCC---CCcEEEEEcccCccccccCHHHHHHHHHHcCCE
Confidence 4554 48889999877 999999888999999999997532 1123446778899999999999886 789
Q ss_pred ceecccc--------------------ccc--c---c-eeeeecCCC--ccccc-cccccccC---Cc-----ccCCCC-
Q psy13453 94 LKVGGVL--------------------RRV--Y---S-SCLVPRGQK--SLRTT-VLFHFLFQ---HW-----QIPLGR- 135 (764)
Q Consensus 94 lHVDa~l--------------------~~~--y---~-s~ll~rd~~--~l~~~-~s~~~d~~---d~-----tle~SR- 135 (764)
++||+.. .++ + + ++++.+.+. .+... .+...|+. ++ ....+.
T Consensus 164 livDa~~~~g~~~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 243 (368)
T PRK13479 164 LIVDAMSSFGAIPIDIAELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPP 243 (368)
T ss_pred EEEEcccccCCccccccccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCc
Confidence 9999842 111 0 1 233332210 00000 00000000 00 000011
Q ss_pred cccHHHHHHHHHHccHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC--c-eeEEEEeeccccccccccccCccCC
Q psy13453 136 RFRALKLWMTLRSYGLKG-LQAYLRKHISLAKKFADLVEQDDRFELVCPPS--M-GLVCFRLKVRFWDKLDNLFGTISFG 211 (764)
Q Consensus 136 r~~ALklWatL~~lG~eG-y~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~--l-~iV~Fry~P~~~~~~~~~~~~~~~~ 211 (764)
......+.+++..+-.+| +.+++++..++++++.+.+++. +++++.++. . .+++|++.... .
T Consensus 244 ~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-------------~ 309 (368)
T PRK13479 244 THVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTFHAPADP-------------A 309 (368)
T ss_pred HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEEECCCCC-------------C
Confidence 122346678888776664 7888899999999999999987 888876543 2 25777643100 0
Q ss_pred ccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 212 DNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 212 ~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
.+ ..++.++|.++|..+... .......+|++... .+++++++.+++.|+++.++
T Consensus 310 ~~--~~~l~~~L~~~gi~v~~g-~~~~~~~iRis~~~-~~t~edi~~~l~~L~~~l~~ 363 (368)
T PRK13479 310 YD--FKEFYERLKEQGFVIYPG-KLTQVDTFRIGCIG-DVDAADIRRLVAAIAEALYW 363 (368)
T ss_pred cC--HHHHHHHHHHCCEEEecC-CCCCCCEEEEecCC-CCCHHHHHHHHHHHHHHHHH
Confidence 11 247889999999865332 11223578996543 56799999999999887654
No 253
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=98.57 E-value=1.4e-06 Score=97.92 Aligned_cols=141 Identities=13% Similarity=0.075 Sum_probs=98.7
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 554 WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
|...+...++.+.+.+++.+ .|.+- .....++|+|+++++..++.+.. . ++..
T Consensus 69 Y~~~~g~~~lr~aia~~~~~-~~~~~-------~~~~i~~t~G~~~al~~~~~~l~----~---------------~gd~ 121 (401)
T TIGR01264 69 YAPTVGALSAREAIASYYHN-PDGPI-------EADDVVLCSGCSHAIEMCIAALA----N---------------AGQN 121 (401)
T ss_pred CCCCCCCHHHHHHHHHHHhh-cCCCC-------CHHHEEECcChHHHHHHHHHHhC----C---------------CCCE
Confidence 33334445566666666654 23221 11357799999999877665331 1 1113
Q ss_pred EEecCCcchhHHHHHHhCCCceEEEecC--CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHHHH
Q psy13453 634 AYTSDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEELGP 708 (764)
Q Consensus 634 i~~S~~aH~Sv~kAa~~lGl~v~~Vp~d--~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eIa~ 708 (764)
|+++.-++......+...|+.++.++++ +++.+|+++|++.+.+. +-+|+.+..++.+|.+ +++++|++
T Consensus 122 v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~NPtG~~~~~~~~~~l~~ 195 (401)
T TIGR01264 122 ILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEK------TAALIVNNPSNPCGSVFSRQHLEEILA 195 (401)
T ss_pred EEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccC------ceEEEEcCCCCCCCCCCCHHHHHHHHH
Confidence 5556666666777888999999999886 35789999999887643 2356667788999988 46888999
Q ss_pred HHHhcCCEEEEeccccccc
Q psy13453 709 ICQEYNIWLHVDAAYAGSA 727 (764)
Q Consensus 709 i~~~~glwLHVDaA~Gg~~ 727 (764)
+|+++|+|+++|.+|....
T Consensus 196 ~a~~~~~~ii~De~y~~~~ 214 (401)
T TIGR01264 196 VAERQCLPIIADEIYGDMV 214 (401)
T ss_pred HHHHCCCEEEEEhhhhhhc
Confidence 9999999999999998644
No 254
>PRK08175 aminotransferase; Validated
Probab=98.56 E-value=4.2e-06 Score=93.96 Aligned_cols=176 Identities=16% Similarity=0.127 Sum_probs=116.8
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 552 FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 552 ~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
..|.......++.+.+.+|+.+..|++-+ .....++|+|++++....+.+. .. +.
T Consensus 61 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~------~~~~i~~t~G~~~~l~~~~~~~----~~---------------~g 115 (395)
T PRK08175 61 HGYSTSRGIPRLRRAISRWYQDRYDVDID------PESEAIVTIGSKEGLAHLMLAT----LD---------------HG 115 (395)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCC------CCCcEEEccCcHHHHHHHHHHh----CC---------------CC
Confidence 44544445677888888999888776431 0124788999988865543321 11 12
Q ss_pred eEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccH---HHHHH
Q psy13453 632 LVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNL---EELGP 708 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl---~eIa~ 708 (764)
..|++++-++......+...|.+++.||+++++ .++++|++++++.. ..+-+|+.+..++.+|.+-+. ++|++
T Consensus 116 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~~l~~~l~~~~---~~~~~v~i~~p~NPtG~~~~~~~~~~i~~ 191 (395)
T PRK08175 116 DTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGV-DFFNELERAIRESY---PKPKMMILGFPSNPTAQCVELEFFEKVVA 191 (395)
T ss_pred CEEEEcCCCCcchHHHHHHcCCeEEEEecccCC-CcHHHHHHHHhhcc---CCceEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 247777788887788888899999999997543 46888998886421 124466667778899988665 78999
Q ss_pred HHHhcCCEEEEeccccccccccchhhhhhcCCC-ccc--EEEEcCCccCCCC
Q psy13453 709 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE-YVD--SFDFNTHKWLLVN 757 (764)
Q Consensus 709 i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie-~aD--Sit~d~HK~l~~P 757 (764)
+|++||+|+++|.+|+.... -......+..+. ..| -++.++-|.++.|
T Consensus 192 ~a~~~~i~ii~De~y~~l~~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~p 242 (395)
T PRK08175 192 LAKRYDVLVVHDLAYADIVY-DGWKAPSIMQVPGAKDVAVEFFTLSKSYNMA 242 (395)
T ss_pred HHHHcCcEEEEecchHhhcc-CCCCCcchhcCCCcccCEEEEeeccccccCc
Confidence 99999999999999976432 111001111121 123 3468899998766
No 255
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.55 E-value=3.9e-07 Score=100.26 Aligned_cols=172 Identities=19% Similarity=0.174 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChH-HHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTAS-EATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgT-eANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
..+.+.++.-+.+++|+++. ...+.++.+| |+..+.+.+.| + .++ .+ .|+.|..
T Consensus 55 ~~ltn~l~~d~~~~~G~~~~--------~~~~~vP~atgm~l~l~l~~l~-~-r~~--------------a~-~Viw~ri 109 (389)
T PF05889_consen 55 AKLTNSLVLDALRLAGLRSV--------KSCFVVPMATGMSLTLCLLALR-M-RPK--------------AK-YVIWPRI 109 (389)
T ss_dssp HHHHHHHHHHHHHHTTHTTH--------CEEEEESS-HHHHHHHHHHHHH-H-HCT-----------------EEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCccc--------cceEEEecccccHHHHHHHHHh-c-ccC--------------Cc-eEEEeec
Confidence 34555566666777898753 3456777777 66666777666 2 221 12 4677999
Q ss_pred cchhHHHHHHhCCCceEEEecC---CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc-ccHHHHHHHHHhcCC
Q psy13453 640 SNSSVEKSAIIGDVPVRQLRSD---DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF-DNLEELGPICQEYNI 715 (764)
Q Consensus 640 aH~Sv~kAa~~lGl~v~~Vp~d---~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai-Dpl~eIa~i~~~~gl 715 (764)
.|+|..||+...|++++.||.. +.-..|.+++|++|++. |..+.+.+.|.-+-..+-. |++.+|++||++||+
T Consensus 110 dqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~---G~~~iLcvltttscfapr~~D~i~~IakiC~~~~I 186 (389)
T PF05889_consen 110 DQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEEL---GADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDI 186 (389)
T ss_dssp ETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHH---CGGGEEEEEEESSTTTTB----HHHHHHHHHHHT-
T ss_pred cccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHh---CCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCC
Confidence 9999999999999999999863 34467889999998554 5567788888877777766 559999999999999
Q ss_pred EEEEeccccccccccchhhhhhc---CCCcccEEEEcCCccCCCCcCceee
Q psy13453 716 WLHVDAAYAGSALLLPEYAHLKR---GLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 716 wLHVDaA~Gg~~l~~~~~r~~l~---gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
++.|.+|||.-. .+..++++ -..|.|.+.-+.-|-+.+|.|-+++
T Consensus 187 PhlvNnAYgvQ~---~~~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~ 234 (389)
T PF05889_consen 187 PHLVNNAYGVQS---SKCMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIM 234 (389)
T ss_dssp -EEEEGTTTTT----HHHHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEE
T ss_pred ceEEccchhhhH---HHHHHHHHHHHhcCCcceeeeecCCCEEecCCCcEE
Confidence 999999999732 11111110 0235677777777777777765443
No 256
>PRK06460 hypothetical protein; Provisional
Probab=98.55 E-value=7.2e-07 Score=99.80 Aligned_cols=151 Identities=16% Similarity=0.075 Sum_probs=98.9
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEE
Q psy13453 555 LSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVA 634 (764)
Q Consensus 555 ~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi 634 (764)
...|...++|+ .+++++|.+. .+++++|++++..++.+. ... ...|
T Consensus 42 ~~~p~~~~L~~----~lA~l~g~~~-----------~v~~~sG~~ai~~~l~al----~~~---------------Gd~V 87 (376)
T PRK06460 42 EANPTVLELTK----KIVELENAEM-----------GVAFSSGMGAISTTALAL----LKP---------------GNSV 87 (376)
T ss_pred CCCccHHHHHH----HHHHHhCCCc-----------EEEeCCHHHHHHHHHHHH----hCC---------------CCEE
Confidence 34566666554 6777777743 355677788776665432 111 1134
Q ss_pred EecCC----cchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHH
Q psy13453 635 YTSDQ----SNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPIC 710 (764)
Q Consensus 635 ~~S~~----aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~ 710 (764)
+++.. +...+.+.++..|+.++.++.++ .+.+++.+++ .+-+|+....++.+|.+-|+++|+++|
T Consensus 88 l~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~-----~~~l~~~~~~------~tklV~l~sp~NPtG~v~d~~~I~~la 156 (376)
T PRK06460 88 LVHRDMFGRSYRFFTDYLKNWGVNVDASNPGS-----DNIIEKAKSK------RYDVVFVENITNPLLRVVDITELSKVC 156 (376)
T ss_pred EEecCCcCcHHHHHHHHHHhhCcEEEEECCCC-----HHHHHHhcCC------CceEEEEECCCCCCCcccCHHHHHHHH
Confidence 44432 22334566778899988887653 2334433222 245788899999999999999999999
Q ss_pred HhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 711 QEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 711 ~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+++|++++||.||+...... .... .+|-+..++||+++.+
T Consensus 157 ~~~g~~vivDea~~~~~~~~----~l~~---~~divv~S~sK~l~G~ 196 (376)
T PRK06460 157 KENGSILIVDATFSTPINQK----PLEL---GADIVVHSASKFLAGH 196 (376)
T ss_pred HHcCCEEEEECCcCccccCC----hhhc---CCCEEEeecceeccCC
Confidence 99999999999998642211 1111 3699999999998743
No 257
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=98.55 E-value=1e-06 Score=95.30 Aligned_cols=211 Identities=16% Similarity=0.129 Sum_probs=133.4
Q ss_pred HHhhcCCCCCCeEEecCC-CCCcccHHHHHHHHHHHh-hCCCCcEEE-EeeCCcccccccCchhhhc--------CCCce
Q psy13453 27 ATHSLSGTPDQVRLSGLP-DSEWLAYLTLRTIYESFR-KSFLCPMCS-GYCGRTLHQDIQSLNAPVS--------NGPLK 95 (764)
Q Consensus 27 Aa~~LGl~~~~v~~Vpvd-~~~rmD~~aLe~~I~~~~-~~G~~p~~V-atAGTT~~G~iDpi~~ia~--------~~wlH 95 (764)
|..++|=+. ..+.++ ++|+|++++++++|..+- ---.+|++| =|.-| ..|++=|++++.+ ++.+|
T Consensus 92 a~~~~~~~~---~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~t-e~GtVy~l~el~~i~~~~k~~~l~LH 167 (342)
T COG2008 92 APEFFGGGQ---KLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTAT-EGGTVYPLDELEAISAVCKEHGLPLH 167 (342)
T ss_pred cHHHHcCCc---eeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccC-CCceecCHHHHHHHHHHHHHhCCcee
Confidence 445565333 334444 799999999999998621 122567775 44444 8899988888664 99999
Q ss_pred eccc--------cccc------cc---eeeeecCCCccccc-------cccccccC-CcccCCCCcccHHHH-HHHHHHc
Q psy13453 96 VGGV--------LRRV------YS---SCLVPRGQKSLRTT-------VLFHFLFQ-HWQIPLGRRFRALKL-WMTLRSY 149 (764)
Q Consensus 96 VDa~--------l~~~------y~---s~ll~rd~~~l~~~-------~s~~~d~~-d~tle~SRr~~ALkl-WatL~~l 149 (764)
+||+ +... |+ ++-+.|.....-.+ |-....++ ...-++-|..+-+.. |... |
T Consensus 168 mDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~--l 245 (342)
T COG2008 168 MDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNRDFAKRARRWRKRAGGLMRKARFLAAQGLYA--L 245 (342)
T ss_pred echHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHHHHHHH--H
Confidence 9993 1111 11 11111111111110 00011122 123344454444433 4433 4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcE
Q psy13453 150 GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVI 229 (764)
Q Consensus 150 G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~ 229 (764)
..+-++..-+|.-++|++|++.+++.|++++..+|+.|+|-.+.. ....+.+...||.
T Consensus 246 ~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~----------------------~~~i~~l~~~~~~ 303 (342)
T COG2008 246 EDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLP----------------------ESAIEALRLAGAL 303 (342)
T ss_pred hccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECC----------------------hHHHHHHHhhchh
Confidence 455588888999999999999999999999999999998877643 1222677777775
Q ss_pred EEEeceeCCe--eEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 230 YIVKGSFQDR--LFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 230 ~vs~t~l~g~--~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
+... .|.+. ...|+ +|++.|++++|++++..++++.
T Consensus 304 ~~~~-~~~~~~~~~vRf-vts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 304 FYRG-VLIGAHGEIVRF-VTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred heee-eeccCCCceEEE-EeeccCCHHHHHHHHHHHHHhh
Confidence 4432 23222 47999 7999999999999999998763
No 258
>PRK07505 hypothetical protein; Provisional
Probab=98.55 E-value=2.8e-06 Score=95.66 Aligned_cols=129 Identities=14% Similarity=0.124 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 560 CTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 560 ~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
.+....++.+.+++++|. + .+++++|++||..++..++...... ..+.+|+.+..
T Consensus 89 ~~~~~~~l~~~la~~~~~-~-----------~~~~~sG~~a~~~ai~~~~~~~~~~-------------~~~~vi~~~~~ 143 (402)
T PRK07505 89 RSQILKDLEEALSELFGA-S-----------VLTFTSCSAAHLGILPLLASGHLTG-------------GVPPHMVFDKN 143 (402)
T ss_pred hhHHHHHHHHHHHHHhCC-C-----------EEEECChHHHHHHHHHHHHhcccCC-------------CCCCEEEEchh
Confidence 466777888899999876 3 3556677889998988765432111 01236677889
Q ss_pred cchhHHHHH--HhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEE
Q psy13453 640 SNSSVEKSA--IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWL 717 (764)
Q Consensus 640 aH~Sv~kAa--~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwL 717 (764)
.|.|+.... ...+.+++.+|.+ |+++|++++++. +.+++++.+.+.+|.+-|+++|.++|++||++|
T Consensus 144 ~H~s~~~~~~~~~~~~~v~~~~~~-----d~~~l~~~~~~~------~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~l 212 (402)
T PRK07505 144 AHASLNILKGICADETEVETIDHN-----DLDALEDICKTN------KTVAYVADGVYSMGGIAPVKELLRLQEKYGLFL 212 (402)
T ss_pred hhHhHHhhhhhhhcCCeEEEeCCC-----CHHHHHHHHhcC------CCEEEEEecccccCCcCCHHHHHHHHHHcCCEE
Confidence 999875322 2234567777753 789999888543 236777788889999999999999999999999
Q ss_pred EEecccc
Q psy13453 718 HVDAAYA 724 (764)
Q Consensus 718 HVDaA~G 724 (764)
++|.+|+
T Consensus 213 i~DEa~~ 219 (402)
T PRK07505 213 YIDDAHG 219 (402)
T ss_pred EEECccc
Confidence 9999984
No 259
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=98.55 E-value=1.5e-06 Score=96.95 Aligned_cols=199 Identities=19% Similarity=0.122 Sum_probs=133.1
Q ss_pred CCCCCCCccccccCCCCChHHHHHHHHHH-hhc--ccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEE
Q psy13453 517 ITHWQSPQFNAYFPTGSSYPSIVGDMLSG-AFG--LIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGII 593 (764)
Q Consensus 517 ~~~~~~P~~~~~~~~~~~~~~~lad~l~~-~lN--~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~Gvf 593 (764)
...|.+-.|++.-..+. ....+.+.+.. ... .........+.-.++|+ .|++++|.+. .++
T Consensus 41 ~~nf~SNdYLGLa~~~~-~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~----~lA~f~g~e~-----------al~ 104 (388)
T COG0156 41 VLNFCSNDYLGLASHPE-LIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEE----ELADFLGAEA-----------ALL 104 (388)
T ss_pred eEeeeccCcccccCCHH-HHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHH----HHHHHhCCCc-----------EEE
Confidence 44577777887765433 22222223332 122 22333445566677776 5677777764 344
Q ss_pred eCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHH
Q psy13453 594 QSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLT 673 (764)
Q Consensus 594 TsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~ 673 (764)
.++|=.||+-.+.+-.. ++.+|+..+..|.|+..++++.+.+++.-+= -|+++||+
T Consensus 105 f~SGy~AN~~~i~~l~~-------------------~~dli~~D~lnHASiidG~rls~a~~~~f~H-----nD~~~Le~ 160 (388)
T COG0156 105 FSSGFVANLGLLSALLK-------------------KGDLIFSDELNHASIIDGIRLSRAEVRRFKH-----NDLDHLEA 160 (388)
T ss_pred EcccchhHHHHHHHhcC-------------------CCcEEEEechhhhhHHHHHHhCCCcEEEecC-----CCHHHHHH
Confidence 45567777665543211 2457899999999999999999888776543 57899999
Q ss_pred HHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhh--cCCC--cccEEEEc
Q psy13453 674 AVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLK--RGLE--YVDSFDFN 749 (764)
Q Consensus 674 ~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l--~gie--~aDSit~d 749 (764)
.+++....+..+.+|+.=.--...|.+-||.+|.++|++|+.||.||-||+.+.+- +.-+... .|++ ..|-++-+
T Consensus 161 ~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G-~~GrG~~e~~g~~~~~vdi~~gT 239 (388)
T COG0156 161 LLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLG-PNGRGLAEHFGLEPEEVDIIVGT 239 (388)
T ss_pred HHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccC-CCCccHHHHhCCCCccceEEEEE
Confidence 99987644434445554444566899999999999999999999999999987653 2212111 1553 35899999
Q ss_pred CCccCCC
Q psy13453 750 THKWLLV 756 (764)
Q Consensus 750 ~HK~l~~ 756 (764)
+-|.++.
T Consensus 240 lsKAlGs 246 (388)
T COG0156 240 LGKALGS 246 (388)
T ss_pred chhhhcc
Confidence 9999984
No 260
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=98.55 E-value=7.7e-07 Score=96.97 Aligned_cols=224 Identities=14% Similarity=-0.032 Sum_probs=130.5
Q ss_pred ccccCCcceeeeeHHHH---HhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhC--CCCcEEEEeeCCccccc---c
Q psy13453 11 AYPSETLSLLIYESFKA---THSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKS--FLCPMCSGYCGRTLHQD---I 82 (764)
Q Consensus 11 ~~~~~~~~~~~YSv~KA---a~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~--G~~p~~VatAGTT~~G~---i 82 (764)
.+.++. .|+|+.++ +++.|+.. +.||.+. +.+|+++|+++|++..+. .++-+++-+-++. .|. .
T Consensus 74 v~~~~~---~~~~~~~~~~~~~~~g~~~---~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n-~g~~~~~ 145 (338)
T cd06502 74 VICHET---AHIYTDEAGAPEFLSGVKL---LPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTE-GGTVYPL 145 (338)
T ss_pred EEEecC---cceeeecCCcHHHHcCceE---EeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecC-CccccCH
Confidence 445555 67777663 56678776 8888865 889999999999753211 1222333333443 353 5
Q ss_pred cCchhhhc-----CCCceeccccc--------cc------cceeeeecCCCcccc---ccc-cccc------cCCcccCC
Q psy13453 83 QSLNAPVS-----NGPLKVGGVLR--------RV------YSSCLVPRGQKSLRT---TVL-FHFL------FQHWQIPL 133 (764)
Q Consensus 83 Dpi~~ia~-----~~wlHVDa~l~--------~~------y~s~ll~rd~~~l~~---~~s-~~~d------~~d~tle~ 133 (764)
++++++++ ++++|||++.. .. ...++...-.+.+.. .+- .+.+ .......+
T Consensus 146 ~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 225 (338)
T cd06502 146 DELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNRDFIARARRRRKQAGG 225 (338)
T ss_pred HHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCHHHHHHHHHHHHHhCC
Confidence 67777664 78999997420 00 001111111111110 000 0000 00001112
Q ss_pred CCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCcc
Q psy13453 134 GRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDN 213 (764)
Q Consensus 134 SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d 213 (764)
+-+..++..++.+..+-..++.+++++..++++++.+.|++. ++. +.++..+++++++.. .+
T Consensus 226 ~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~~~~~~v~~~~----------------~~ 287 (338)
T cd06502 226 GMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL-GGL-ESEVQTNIVLLDPVE----------------AN 287 (338)
T ss_pred ChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CCC-cccccCCeEEEecCC----------------cc
Confidence 223344555666677766789999999999999999999987 443 456788899987531 12
Q ss_pred HHHHHHHHHHH---hcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHH
Q psy13453 214 DLNKAVYDRII---ARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRT 265 (764)
Q Consensus 214 ~~n~~L~~~L~---~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~ 265 (764)
.+..++.+++. +.|..+... . ..++|+++ +..+++++++.+++.+++
T Consensus 288 ~~~~~l~~~l~~~~~~gi~~~~~---~-~~~lRi~~-~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 288 AVFVELSKEAIERRGEGVLFYAW---G-EGGVRFVT-HWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHHHHHHHHHhhhCCEEEEec---C-CCeEEEEe-ecCCCHHHHHHHHHHHhc
Confidence 23345555554 567644322 1 26799965 556678999999998754
No 261
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=98.55 E-value=1e-06 Score=97.60 Aligned_cols=155 Identities=13% Similarity=0.084 Sum_probs=102.4
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
..+++++++.+|.+++ ..++|+|++++...++.+. .. ++ +++.+ -+....
T Consensus 58 ~~lr~~ia~~~~~~~~---------~i~it~Ga~~~l~~~~~~l-----~~--------------g~-viv~~-P~y~~~ 107 (356)
T PRK08056 58 RHLHQALARHHQVPAS---------WILAGNGETESIFAVVSGL-----KP--------------RR-AMIVT-PGFAEY 107 (356)
T ss_pred HHHHHHHHHHhCcChh---------hEEECCCHHHHHHHHHHHh-----CC--------------CC-EEEeC-CCcHHH
Confidence 5677788888888663 5788999998876554421 11 12 33333 233445
Q ss_pred HHHHHhCCCceEEEecCCC--CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHHHHHHHhcCCEEEE
Q psy13453 645 EKSAIIGDVPVRQLRSDDN--GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEELGPICQEYNIWLHV 719 (764)
Q Consensus 645 ~kAa~~lGl~v~~Vp~d~~--g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eIa~i~~~~glwLHV 719 (764)
...++..|.+++.+|.+++ +.+| +++++.+.+ .+-+|+.+..++.||.+-+ +++|+++|+++++|+.+
T Consensus 108 ~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~------~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~ 180 (356)
T PRK08056 108 RRALQQVGCEIRRYSLREADGWQLT-DAILEALTP------DLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALIL 180 (356)
T ss_pred HHHHHHcCCeEEEEecccccCCCcc-HHHHHhccC------CCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEE
Confidence 5678889999999998743 3455 344454432 2336667888999999987 88899999999999999
Q ss_pred eccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 720 DAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 720 DaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
|.+|..+..-...+-..+...+ ..-+..+++|+++.|
T Consensus 181 De~y~~~~~~~~~~~~~~~~~~-~~i~~~S~SK~~~~~ 217 (356)
T PRK08056 181 DEAFIDFIPDETGFIPQLADNP-HLWVLRSLTKFYAIP 217 (356)
T ss_pred ecchhccCCcchHHHHHhccCC-CEEEEEechhhccCc
Confidence 9999765321111112223322 346779999999854
No 262
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=98.54 E-value=2e-06 Score=95.02 Aligned_cols=154 Identities=14% Similarity=0.074 Sum_probs=107.8
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
.++.+++++.+|.+.+ ...++|+|+++++..++.+.. . ++..|++..-++...
T Consensus 66 ~~lr~~ia~~~~~~~~--------~~I~~t~G~~~~i~~~~~~~~----~---------------~gd~vlv~~P~y~~~ 118 (356)
T PRK04870 66 AALKAALRAAMGVPAG--------ADVLLGNGSDELIQLLALACA----K---------------PGATVLAPEPGFVMY 118 (356)
T ss_pred HHHHHHHHHHhCcCCC--------CcEEEcCCHHHHHHHHHHHhc----C---------------CCCEEEECCCCHHHH
Confidence 3456677777787542 246788888887655543221 1 122467777888888
Q ss_pred HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEecccc
Q psy13453 645 EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYA 724 (764)
Q Consensus 645 ~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~G 724 (764)
..++...|++++.+|+++++.+|+++|++++.+. .+-+|+.+..++.+|.+-+.+++.++++..+.|+++|.+|.
T Consensus 119 ~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~-----~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~ 193 (356)
T PRK04870 119 RMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEH-----RPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQ 193 (356)
T ss_pred HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-----CCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCch
Confidence 8899999999999999988899999999998642 13366667789999999999999888887799999999997
Q ss_pred ccccccchhhhhhcCCCcccEEEEcCCcc
Q psy13453 725 GSALLLPEYAHLKRGLEYVDSFDFNTHKW 753 (764)
Q Consensus 725 g~~l~~~~~r~~l~gie~aDSit~d~HK~ 753 (764)
.... ..+...+...++ --+.-++.|+
T Consensus 194 ~~~~--~~~~~~~~~~~~-vi~~~S~SK~ 219 (356)
T PRK04870 194 PFAG--DSWLPRLARFPN-LLVMRTVSKL 219 (356)
T ss_pred hhcC--cchHHHHhhCCC-EEEEecchhh
Confidence 5321 111112222222 2456778894
No 263
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=98.53 E-value=6.9e-07 Score=98.94 Aligned_cols=162 Identities=13% Similarity=-0.004 Sum_probs=107.3
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
++.+.+++++|.+++ ..++|+|+++++...+.+. .. ++..|++++-++....
T Consensus 71 ~lr~~ia~~~~~~~~---------~i~~t~G~~~~l~~~~~~l----~~---------------~gd~vl~~~p~y~~~~ 122 (367)
T PRK02731 71 ELKAALAEKFGVDPE---------RIILGNGSDEILELLARAY----LG---------------PGDEVIYSEHGFAVYP 122 (367)
T ss_pred HHHHHHHHHhCcCHH---------HEEEcCCHHHHHHHHHHHh----cC---------------CCCEEEEecCCHHHHH
Confidence 455667777787543 5788898888754433321 11 1124666777776667
Q ss_pred HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc--CCEEEEeccc
Q psy13453 646 KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY--NIWLHVDAAY 723 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~--glwLHVDaA~ 723 (764)
..+...|.+++.+|.+ ++.+|+++|++.+.+. +-+|+.+..++.+|.+-+.++|.++|+.+ |+|+++|.+|
T Consensus 123 ~~~~~~g~~~~~~~~~-~~~~~~~~l~~~~~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y 195 (367)
T PRK02731 123 IAAQAVGAKPVEVPAK-DYGHDLDAMLAAVTPR------TRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAY 195 (367)
T ss_pred HHHHHcCCeEEEeccc-CCCCCHHHHHHHhCCC------CcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcH
Confidence 6778899999999984 5789999999988532 44777788999999999999999999875 9999999998
Q ss_pred cccccccchhh--hhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 724 AGSALLLPEYA--HLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 724 Gg~~l~~~~~r--~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
.....-..... ..++.-++ .-+..++.|.++.| +-+|.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~-~i~~~S~SK~~g~~G~RiG~l 237 (367)
T PRK02731 196 AEYVRRKDYEDGLELVAKFPN-VVVTRTFSKAYGLAGLRVGYG 237 (367)
T ss_pred HHhccCcCcccHHHHHhhcCC-EEEEeeehHhhcCcccceeee
Confidence 76432111000 11111111 23344777987644 445654
No 264
>PRK09105 putative aminotransferase; Provisional
Probab=98.52 E-value=2.7e-06 Score=94.91 Aligned_cols=162 Identities=16% Similarity=0.084 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS 643 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S 643 (764)
..++.+.+++.+|.+++ ..++|+|+++++..++.+.. . ++..|++++-+|..
T Consensus 80 ~~~Lr~aia~~~~v~~e---------~I~it~Gs~~ai~~~~~~l~----~---------------~gd~Vli~~P~y~~ 131 (370)
T PRK09105 80 EDDLRTLFAAQEGLPAD---------HVMAYAGSSEPLNYAVLAFT----S---------------PTAGLVTADPTYEA 131 (370)
T ss_pred HHHHHHHHHHHhCcChh---------hEEEcCChHHHHHHHHHHHc----C---------------CCCEEEEeCCChHH
Confidence 33455667778888663 67899999998777665331 1 11246677788888
Q ss_pred HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh--cCCEEEEec
Q psy13453 644 VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE--YNIWLHVDA 721 (764)
Q Consensus 644 v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~--~glwLHVDa 721 (764)
...+++..|.+++.+|.++++.+|+++|++.. + .+-+|+.+..++.||.+-+.++|.++++. +++|+++|.
T Consensus 132 ~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~-~------~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDE 204 (370)
T PRK09105 132 GWRAADAQGAPVAKVPLRADGAHDVKAMLAAD-P------NAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDE 204 (370)
T ss_pred HHHHHHHcCCeEEEecCCCCCCCCHHHHHhcC-C------CCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEEC
Confidence 88899999999999999888899999997652 1 13367777889999999988888888764 489999999
Q ss_pred cccccccccchhhhhhcCCCcccEEEE-cCCccCCCC-cCceee
Q psy13453 722 AYAGSALLLPEYAHLKRGLEYVDSFDF-NTHKWLLVN-FDCSAM 763 (764)
Q Consensus 722 A~Gg~~l~~~~~r~~l~gie~aDSit~-d~HK~l~~P-~~~g~l 763 (764)
+|..+.- .+...... . ...+.+++ ++.|.++.| +-+|.+
T Consensus 205 aY~~f~~-~~s~~~~~-~-~~~~vi~~~SfSK~~g~~GlRiG~~ 245 (370)
T PRK09105 205 AYIHFSD-APSVVDLV-A-QRKDLIVLRTFSKLYGMAGMRLGLA 245 (370)
T ss_pred chHHhcc-CcchHHHH-h-hCCCEEEEecccHhhcCCccceeee
Confidence 9954321 11111111 1 12355665 777877644 224543
No 265
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.52 E-value=3.2e-06 Score=102.48 Aligned_cols=231 Identities=10% Similarity=-0.012 Sum_probs=142.2
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
.|.|..-.+...|+.. +.||+|++|.+|+++|+++|++.. . ...+ +.|-++|..+..+|+.+|++ ++.
T Consensus 600 aHgtNpasa~~~GieV---v~Vp~D~~G~iDle~L~a~I~~~~--~-~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Gal 673 (954)
T PRK12566 600 AHGTNPASAQMAGMRV---VIVECDPDGNVDLDDLKAKAAAAG--D-RLSCLMITYPSTHGVYEEGIREICEVVHQHGGQ 673 (954)
T ss_pred ccccCHHHHHHCCCEE---EEeccCCCCCcCHHHHHHHhhccC--C-CEEEEEEEecCcCceecchHHHHHHHHHHcCCE
Confidence 5655555688889887 999999999999999999997421 1 2334 58889888888899999886 778
Q ss_pred ceeccccccc---------cce-eeeecCCCccc--cc--------ccc--c--cccCCcc---c------CCCC----c
Q psy13453 94 LKVGGVLRRV---------YSS-CLVPRGQKSLR--TT--------VLF--H--FLFQHWQ---I------PLGR----R 136 (764)
Q Consensus 94 lHVDa~l~~~---------y~s-~ll~rd~~~l~--~~--------~s~--~--~d~~d~t---l------e~SR----r 136 (764)
++|||+.... +++ ++...-.+++- .. +.+ + .-...|. . ++++ -
T Consensus 674 v~vDgA~~~a~~~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~ 753 (954)
T PRK12566 674 VYMDGANLNAQVGLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPW 753 (954)
T ss_pred EEEEeeChhhccCCCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeeccc
Confidence 8999953100 111 11110011110 00 000 0 0001110 1 1111 1
Q ss_pred cc---HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC---C-ceeEEEEeeccccccccccccCcc
Q psy13453 137 FR---ALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP---S-MGLVCFRLKVRFWDKLDNLFGTIS 209 (764)
Q Consensus 137 ~~---ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P---~-l~iV~Fry~P~~~~~~~~~~~~~~ 209 (764)
.. ++..|+-|+.+|.+ .++.-+.++.+|+|++++|++ ++++...+ . +.-..++..+ ... .
T Consensus 754 gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~--~~~v~~~~~~~~~~hEfii~~~~--l~~--------~ 820 (954)
T PRK12566 754 GSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGG--AFPVLYRGRNERVAHECILDLRP--LKA--------Q 820 (954)
T ss_pred chHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHh--hCCCCcCCCCCCeeeEEEEEccc--ccc--------c
Confidence 12 45779999999999 999999999999999999987 44444333 1 1111222111 000 0
Q ss_pred CCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHcc
Q psy13453 210 FGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLRG 273 (764)
Q Consensus 210 ~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~~ 273 (764)
.+.+. ..+.++|.+.|...... .|.....||++.+--+ +++++|+|++.++.+.+++.+-
T Consensus 821 ~g~~~--~dvakRL~d~Gihapt~-~fPv~~~LmIepTE~e-skeEIDrf~eAL~~I~~e~~~v 880 (954)
T PRK12566 821 TGISE--EDVAKRLMDYGFHAPTM-SFPVPGTLMVEPTESE-SKAELDRFVEAMLSIRAEIGKV 880 (954)
T ss_pred cCCCH--HHHHHHHHHCCcEEeEE-eeccCCEEEEEeeeeC-CHHHHHHHHHHHHHHHHHHHHH
Confidence 01221 45788888878744332 3445668999876655 5889999999999999887543
No 266
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=98.51 E-value=1.2e-06 Score=96.79 Aligned_cols=157 Identities=15% Similarity=0.010 Sum_probs=110.9
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
..+.+++++.+|.+++ ..++|+|+++++.+++.+. ... ++..|+++.-++...
T Consensus 60 ~~l~~~~a~~~g~~~~---------~I~~~~Gs~e~i~~~~~~~----~~~--------------g~~~vli~~P~y~~y 112 (351)
T PRK01688 60 KAVIENYAAYAGVKPE---------QVLVSRGADEGIELLIRAF----CEP--------------GKDAILYCPPTYGMY 112 (351)
T ss_pred HHHHHHHHHHhCCCHH---------HEEEcCCHHHHHHHHHHHh----cCC--------------CCCEEEEcCCCHHHH
Confidence 4677789999998764 6789999999876665432 110 112467777888888
Q ss_pred HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc--CCEEEEecc
Q psy13453 645 EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY--NIWLHVDAA 722 (764)
Q Consensus 645 ~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~--glwLHVDaA 722 (764)
..+++..|++++.||.++++.+|+++|++++. . +-+|+.+..++.||.+-+.+++.++++.. +.+++||.|
T Consensus 113 ~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~~-~------~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEa 185 (351)
T PRK01688 113 SVSAETIGVEIRTVPTLDNWQLDLPAIADNLD-G------VKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEA 185 (351)
T ss_pred HHHHHHcCCEEEEeecCCCCCCCHHHHHHhcc-C------CcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECc
Confidence 88999999999999998889999999998872 2 23677789999999998877777776532 689999999
Q ss_pred ccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 723 YAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 723 ~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
|.-+.. .+.....+...++ =-+.-++.|+++.|
T Consensus 186 y~~f~~-~~s~~~~~~~~~n-~iv~rSfSK~~gla 218 (351)
T PRK01688 186 YIEFCP-QASLAGWLAEYPH-LVILRTLSKAFALA 218 (351)
T ss_pred hhhcCC-CCChHHHHhhCCC-EEEEecchHhhcCH
Confidence 976431 1111112211111 14566888987644
No 267
>PRK09148 aminotransferase; Validated
Probab=98.51 E-value=4.4e-06 Score=94.28 Aligned_cols=175 Identities=15% Similarity=0.106 Sum_probs=115.4
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCC-cEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccC
Q psy13453 552 FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPG-GGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRN 630 (764)
Q Consensus 552 ~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~-~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~ 630 (764)
..|........+.+.+.+|+.+.+|.+-+ .. ..++|+|++++..+++.+.. . +
T Consensus 62 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-------~~~~I~it~G~~~al~~~~~~l~----~---------------~ 115 (405)
T PRK09148 62 HRYSASKGIPGLRRAQAAYYARRFGVKLN-------PDTQVVATLGSKEGFANMAQAIT----A---------------P 115 (405)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCC-------CCCcEEEcCChHHHHHHHHHHhc----C---------------C
Confidence 34444445567888888888887776421 12 57899999998766654321 1 1
Q ss_pred ceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccH---HHHH
Q psy13453 631 KLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNL---EELG 707 (764)
Q Consensus 631 ~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl---~eIa 707 (764)
...|++..-++.....++...|++++.||++.++. +++++++.++... ..+.+|+.+..++.+|.+-+. ++|.
T Consensus 116 gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~-~~~~l~~~~~~~~---~~~~~v~l~~P~NPtG~~~s~~~l~~l~ 191 (405)
T PRK09148 116 GDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEE-FFPALERAVRHSI---PKPIALIVNYPSNPTAYVADLDFYKDVV 191 (405)
T ss_pred CCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCC-CccCHHHHHhhcc---ccceEEEEeCCCCCCCcCCCHHHHHHHH
Confidence 12466677777777778888999999999975542 3556666665322 135688888889999998665 6788
Q ss_pred HHHHhcCCEEEEecccccccccc---chhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 708 PICQEYNIWLHVDAAYAGSALLL---PEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 708 ~i~~~~glwLHVDaA~Gg~~l~~---~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
++|++||+|+++|.+|+....-. +.... +.+.....-+.-++.|.++.|
T Consensus 192 ~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~-~~~~~~~~i~~~SfSK~~~~p 243 (405)
T PRK09148 192 AFAKKHDIIILSDLAYSEIYFDGNPPPSVLQ-VPGAKDVTVEFTSMSKTFSMA 243 (405)
T ss_pred HHHHHcCeEEEEeccchhhhcCCCCCCChhh-CCCccCcEEEEeccccccCCc
Confidence 88999999999999998643211 11111 112111123467899988755
No 268
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=98.51 E-value=2.8e-06 Score=95.42 Aligned_cols=160 Identities=16% Similarity=0.137 Sum_probs=108.3
Q ss_pred HHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCC-ccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhc
Q psy13453 539 VGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLP-EEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQ 617 (764)
Q Consensus 539 lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p-~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~ 617 (764)
+.+.+...++ ....|........+-+.+.+|+.+..|++ -+ .....++|+|++++...++.+..+ + +
T Consensus 47 ~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~------~~~~i~it~G~~~al~~~~~~l~~---~--~ 114 (396)
T PRK09147 47 IKDALAANLD-GLASYPTTAGLPALREAIAAWLERRYGLPALD------PATQVLPVNGSREALFAFAQTVID---R--D 114 (396)
T ss_pred HHHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCC------ccceEEECCChHHHHHHHHHHHcC---C--C
Confidence 3334444333 23445544455667778888888888865 21 002467889999987665543211 0 0
Q ss_pred cCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccC
Q psy13453 618 SKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTT 695 (764)
Q Consensus 618 ~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT 695 (764)
.+ +..|++..-+......++..+|++++.||+++ ++.+|+++|++.+.+. +-+|+.+..++
T Consensus 115 ~~-----------gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~------~k~i~l~nP~N 177 (396)
T PRK09147 115 GP-----------GPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWAR------TQLLFVCSPGN 177 (396)
T ss_pred CC-----------CCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhc------cEEEEEcCCCC
Confidence 00 12355555555666778888999999999974 3579999999887543 33556668899
Q ss_pred Cccccc---cHHHHHHHHHhcCCEEEEeccccccc
Q psy13453 696 GTCAFD---NLEELGPICQEYNIWLHVDAAYAGSA 727 (764)
Q Consensus 696 ~~GaiD---pl~eIa~i~~~~glwLHVDaA~Gg~~ 727 (764)
.||.+= .+++|+++|++|++|+.+|-+|+-..
T Consensus 178 PTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~ 212 (396)
T PRK09147 178 PTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIY 212 (396)
T ss_pred CcCccCCHHHHHHHHHHHHHcCeEEEeeccccccc
Confidence 999884 77888889999999999999998753
No 269
>PRK03321 putative aminotransferase; Provisional
Probab=98.51 E-value=1.9e-06 Score=94.99 Aligned_cols=129 Identities=12% Similarity=0.049 Sum_probs=92.7
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
.++.+.+++++|.++ ...++|+|+++++..++.+. .. ++..|++..-+....
T Consensus 60 ~~lr~~ia~~~~~~~---------~~I~~~~G~~~~l~~~~~~~----~~---------------~gd~Vli~~p~y~~~ 111 (352)
T PRK03321 60 VELRAALAEHLGVPP---------EHVAVGCGSVALCQQLVQAT----AG---------------PGDEVIFAWRSFEAY 111 (352)
T ss_pred HHHHHHHHHHhCcCH---------HHEEECCCHHHHHHHHHHHh----cC---------------CCCEEEeCCCCHHHH
Confidence 345566677777654 25788888887765544321 11 112355554444444
Q ss_pred HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh--cCCEEEEecc
Q psy13453 645 EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE--YNIWLHVDAA 722 (764)
Q Consensus 645 ~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~--~glwLHVDaA 722 (764)
..+++..|.+++.||.++++.+|++++++.+++. +-+|+.+..++.+|.+-|.++|.++|++ +++|+++|.+
T Consensus 112 ~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~ 185 (352)
T PRK03321 112 PILVQVAGATPVQVPLTPDHTHDLDAMAAAITDR------TRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEA 185 (352)
T ss_pred HHHHHHcCCEEEEccCCCCCCCCHHHHHHhhccC------CCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEech
Confidence 5567788999999999877899999999988542 3367777889999999999999999987 5999999999
Q ss_pred ccccc
Q psy13453 723 YAGSA 727 (764)
Q Consensus 723 ~Gg~~ 727 (764)
|+...
T Consensus 186 y~~~~ 190 (352)
T PRK03321 186 YVEYV 190 (352)
T ss_pred HHHhc
Confidence 98654
No 270
>PRK07582 cystathionine gamma-lyase; Validated
Probab=98.50 E-value=1.1e-06 Score=97.97 Aligned_cols=149 Identities=17% Similarity=0.082 Sum_probs=99.3
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|....+|+. ++++. .+ ..+++++|+.++..++.+. .. +...|+
T Consensus 49 ~~p~~~~Le~~----lA~l~--~~----------~~v~~~sG~~Ai~~~l~al----l~---------------~Gd~Vl 93 (366)
T PRK07582 49 SNPTWRALEAA----LGELE--GA----------EALVFPSGMAAITAVLRAL----LR---------------PGDTVV 93 (366)
T ss_pred CCccHHHHHHH----HHHHc--CC----------CEEEECCHHHHHHHHHHHh----cC---------------CCCEEE
Confidence 45666667764 45554 22 3678888888876665432 11 122466
Q ss_pred ecCCcchhHHHHH----HhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~Sv~kAa----~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...++.....+ ...|++++.|+.++++. .+.+. +-+|+....++.+|.+.|+++|+++|+
T Consensus 94 ~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~--------~~~~~------t~lV~le~p~NPtg~v~di~~I~~~a~ 159 (366)
T PRK07582 94 VPADGYYQVRALAREYLAPLGVTVREAPTAGMAE--------AALAG------ADLVLAETPSNPGLDVCDLAALAAAAH 159 (366)
T ss_pred EeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH--------HhccC------ceEEEEECCCCCCCCccCHHHHHHHHH
Confidence 7777776655433 34788999998764321 11121 336667788888999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCc
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDC 760 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~ 760 (764)
++|++++||++|+.+....| .. + .+|-+..++|||++.|-++
T Consensus 160 ~~g~~lvVD~t~~~~~~~~p-~~-----~-g~Divv~S~sK~l~G~~g~ 201 (366)
T PRK07582 160 AAGALLVVDNTTATPLGQRP-LE-----L-GADLVVASDTKALTGHSDL 201 (366)
T ss_pred HcCCEEEEECCCCCccccCc-hh-----c-CCcEEEecccccccCCCCe
Confidence 99999999999864322111 11 1 3699999999999887663
No 271
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=98.50 E-value=3.3e-06 Score=95.44 Aligned_cols=158 Identities=14% Similarity=0.117 Sum_probs=111.3
Q ss_pred HHHHHHHHhhccc-CccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhh
Q psy13453 538 IVGDMLSGAFGLI-GFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHW 616 (764)
Q Consensus 538 ~lad~l~~~lN~n-~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~ 616 (764)
.+-+.+...++.. ...|........+-+.+.+|+.+..|++-+ ....++|+|+++++..++.+.. .
T Consensus 53 ~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-------~~~I~it~G~~~al~~~~~~l~----~-- 119 (409)
T PLN00143 53 IAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLS-------PDDVYLTLGCKHAAEIIIKVLA----R-- 119 (409)
T ss_pred HHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-------HhhEEEecChHHHHHHHHHHHc----C--
Confidence 3444444445433 233544455666777788888877666432 2467899999998777655321 1
Q ss_pred ccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecC--CCCcccHHHHHHHHHHhhhcCCCceEEEEeecc
Q psy13453 617 QSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGT 694 (764)
Q Consensus 617 ~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d--~~g~md~~~Le~~I~~~~~~G~~p~~VvataGT 694 (764)
+...|++..-+.......+...|.+++.++.+ +++.+|+++|++++++. +..++.+..+
T Consensus 120 -------------~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~~~~~nP~ 180 (409)
T PLN00143 120 -------------PEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADEN------TIAMVIINPG 180 (409)
T ss_pred -------------CCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccC------CEEEEEECCC
Confidence 11245666667777778888999999999985 35679999999887543 3366666789
Q ss_pred CCcccccc---HHHHHHHHHhcCCEEEEeccccccc
Q psy13453 695 TGTCAFDN---LEELGPICQEYNIWLHVDAAYAGSA 727 (764)
Q Consensus 695 T~~GaiDp---l~eIa~i~~~~glwLHVDaA~Gg~~ 727 (764)
+.||.+-+ +++|+++|++|++|+++|.+|....
T Consensus 181 NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~ 216 (409)
T PLN00143 181 NPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIV 216 (409)
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccc
Confidence 99999965 7778888999999999999998643
No 272
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=98.49 E-value=1.4e-06 Score=94.40 Aligned_cols=216 Identities=8% Similarity=-0.010 Sum_probs=134.1
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccH--HHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhh---c----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAY--LTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPV---S---- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~--~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia---~---- 90 (764)
.|+|+.++++.+|+.. +.||+++++.++. +.+++.+.. .+.+++.+.+++++|.+.|++++. +
T Consensus 92 ~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~-----~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~ 163 (350)
T cd00609 92 TYPGYEAAARLAGAEV---VPVPLDEEGGFLLDLELLEAAKTP-----KTKLLYLNNPNNPTGAVLSEEELEELAELAKK 163 (350)
T ss_pred CchhHHHHHHHCCCEE---EEEecccccCCccCHHHHHhhcCc-----cceEEEEECCCCCCCcccCHHHHHHHHHHHHh
Confidence 6899999999999766 9999998888876 555555433 223445666999999999987654 2
Q ss_pred -CCCceeccccccc------c---------ce-eeeecCCCccc-c----c-ccccc-c-------cCCcccCCCCcccH
Q psy13453 91 -NGPLKVGGVLRRV------Y---------SS-CLVPRGQKSLR-T----T-VLFHF-L-------FQHWQIPLGRRFRA 139 (764)
Q Consensus 91 -~~wlHVDa~l~~~------y---------~s-~ll~rd~~~l~-~----~-~s~~~-d-------~~d~tle~SRr~~A 139 (764)
++|+++|++.... . .. +++..-.+.+. . . +.... + ...+...+......
T Consensus 164 ~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (350)
T cd00609 164 HGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQ 243 (350)
T ss_pred CCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHhcccCCChHHH
Confidence 8899999964210 0 00 11111111111 0 0 00000 0 11111112223333
Q ss_pred HHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHH
Q psy13453 140 LKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAV 219 (764)
Q Consensus 140 LklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L 219 (764)
..++..++... +++.++.++..+.++++.+.+++.+...+..++.-+.+.|++.+ . .....+
T Consensus 244 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~---------------~--~~~~~~ 305 (350)
T cd00609 244 AAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPE---------------G--DDEEFL 305 (350)
T ss_pred HHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCC---------------C--ChHHHH
Confidence 45555555444 88999999999999999999999876654333434455555431 1 012356
Q ss_pred HHHHHhcCcEEEEeceeC--CeeEEEEeccCCCCCHHHHHHHHHHHH
Q psy13453 220 YDRIIARKVIYIVKGSFQ--DRLFMRFAICSSQTEESDVQLGWNEIR 264 (764)
Q Consensus 220 ~~~L~~~G~~~vs~t~l~--g~~~LRi~v~np~Tt~e~i~~~l~~l~ 264 (764)
.+.|.+.|.......... +..++|+++..+ +++++.+++.|+
T Consensus 306 ~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~---~~~i~~~~~al~ 349 (350)
T cd00609 306 ERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP---EEELEEALERLA 349 (350)
T ss_pred HHHHHhCCEEEecccccccCCCCeEEEEeeCC---HHHHHHHHHHhh
Confidence 667777787555444333 678999998888 999999998875
No 273
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=98.48 E-value=1.1e-06 Score=97.78 Aligned_cols=157 Identities=15% Similarity=0.051 Sum_probs=108.4
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
.+.+++++.+|.+++ ..++|+|+++++...+.+. .. ++..|++..-++....
T Consensus 75 ~lr~~ia~~~~~~~~---------~i~~t~G~~~~l~~~~~~~----~~---------------~gd~vli~~P~y~~~~ 126 (371)
T PRK05166 75 ALREAIAARTGVPAD---------RIILGNGSEDLIAVICRAV----LR---------------PGDRVVTLYPSFPLHE 126 (371)
T ss_pred HHHHHHHHHhCcCHH---------HEEEcCCHHHHHHHHHHHh----cC---------------CCCEEEEcCCChHHHH
Confidence 466777888887653 6789999999865544322 11 1224666777777778
Q ss_pred HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh--cCCEEEEeccc
Q psy13453 646 KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE--YNIWLHVDAAY 723 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~--~glwLHVDaA~ 723 (764)
..++..|++++.||.++++.+|+++|++.+++.. -+|+.+..++.||.+-+.+++.++++. +++|+++|.+|
T Consensus 127 ~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y 200 (371)
T PRK05166 127 DYPTMMGARVERVTVTPDLGFDLDALCAAVARAP------RMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAY 200 (371)
T ss_pred HHHHHcCCeEEEeecCCCCCCCHHHHHHhhhcCC------CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcH
Confidence 8888999999999999889999999999886542 366778899999999888777777654 48999999999
Q ss_pred cccccccchhhh---hhcCCCcccEEEEcCCccCCCC
Q psy13453 724 AGSALLLPEYAH---LKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 724 Gg~~l~~~~~r~---~l~gie~aDSit~d~HK~l~~P 757 (764)
+-.. ....+.. .+.....---+.-++-|.++.|
T Consensus 201 ~~~~-~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~ 236 (371)
T PRK05166 201 AEYA-AGDDYPSALTLLKARGLPWIVLRTFSKAYGLA 236 (371)
T ss_pred HHhc-CCcCcccHHHHHhhcCCCEEEEeechHhhhcc
Confidence 8654 2111111 1111100013556789988744
No 274
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=98.48 E-value=4e-06 Score=94.18 Aligned_cols=159 Identities=13% Similarity=0.045 Sum_probs=101.0
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
.++-+.|++++|.+ ..+|+++||+||..|+.+||....... + .. ..++-+|.++..-|-+.
T Consensus 86 ~~l~~~l~~~~~~~-----------~~~~~~SGs~A~e~al~~a~~~~~~~~---g--~~---~~~~~vi~~~~~~HG~~ 146 (401)
T PRK00854 86 APLYEELAALTGSH-----------KVLPMNSGAEAVETAIKAVRKWGYEVK---G--VP---EGQAEIIVCADNFHGRT 146 (401)
T ss_pred HHHHHHHHhhCCCC-----------EEEEeCCcHHHHHHHHHHHHHHHHhcc---C--CC---CCCceEEEECCCcCCcc
Confidence 33444566666653 368999999999999999987532110 0 00 00123566666667665
Q ss_pred HHHHHhCC------------CceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc----HHHHHH
Q psy13453 645 EKSAIIGD------------VPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN----LEELGP 708 (764)
Q Consensus 645 ~kAa~~lG------------l~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp----l~eIa~ 708 (764)
.-+..+.+ .++..+|- .|+++|++.|.+. +.+|+.....+.+|.+-| +++|++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~~~------~~aii~e~~~~~~G~~~~~~~~l~~l~~ 215 (401)
T PRK00854 147 LSIVGFSTDPDARGGFGPFTPGFRVVPF-----GDAEALEAAITPN------TVAFLVEPIQGEAGVIIPPAGYFTRVRE 215 (401)
T ss_pred HHHHhccCCccccccCCCCCCCeEEeCC-----CCHHHHHHHhCCC------eEEEEEccccCCCCCcCCCHHHHHHHHH
Confidence 44332211 12333332 4789999988542 447777778888898876 999999
Q ss_pred HHHhcCCEEEEeccccccccccch-hhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 709 ICQEYNIWLHVDAAYAGSALLLPE-YAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 709 i~~~~glwLHVDaA~Gg~~l~~~~-~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+|++||+++++|.+|.|. -..++ +.....|+ .+|-++++ |++..-
T Consensus 216 l~~~~gi~lI~DEv~~g~-g~~g~~~~~~~~g~-~~D~~~~~--K~l~gg 261 (401)
T PRK00854 216 LCTANNVTLILDEIQTGL-GRTGKLLAEEHEGI-EADVTLIG--KALSGG 261 (401)
T ss_pred HHHHcCCEEEEechhhCC-CCCchHhHHhhcCC-CCCEEEec--ccccCC
Confidence 999999999999999863 22222 11222344 35777774 888654
No 275
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=98.48 E-value=1e-06 Score=97.30 Aligned_cols=156 Identities=18% Similarity=0.099 Sum_probs=106.6
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
++.+++++.+|.++ ...++|+|+++++..++.+. .. ++..|++.+-+.....
T Consensus 68 ~lr~~ia~~~~~~~---------~~i~~t~G~~~~l~~~~~~~----~~---------------~gd~v~~~~p~y~~~~ 119 (359)
T PRK03158 68 ELRTKVAKHLGVDE---------EQLLFGAGLDEVIQMISRAL----LN---------------PGTNTVMAEPTFSQYR 119 (359)
T ss_pred HHHHHHHHHhCCCH---------HHEEECCCHHHHHHHHHHHH----hC---------------CCCEEEEcCCCHHHHH
Confidence 35566666677654 25789999999875444322 11 1124666666677777
Q ss_pred HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh--cCCEEEEeccc
Q psy13453 646 KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE--YNIWLHVDAAY 723 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~--~glwLHVDaA~ 723 (764)
.++...|.+++.+|++ ++.+|+++|++.+.+. +-+|+.+..++.+|.+-+.++|.++++. +|+|+++|.+|
T Consensus 120 ~~~~~~g~~~~~~~~~-~~~~d~~~l~~~~~~~------~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y 192 (359)
T PRK03158 120 HNAIIEGAEVREVPLK-DGGHDLEAMLKAIDEQ------TKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAY 192 (359)
T ss_pred HHHHHcCCeEEEEecC-CCCcCHHHHHHhcCCC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECch
Confidence 8888899999999998 6889999999887542 3366667889999999999999999887 59999999999
Q ss_pred cccccccc--hhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 724 AGSALLLP--EYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 724 Gg~~l~~~--~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
..+..... .....++..+ -.-+.-++.|.++.|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~-~vi~~~S~SK~~g~~ 227 (359)
T PRK03158 193 YEYVTAEDYPDTLPLLEKYE-NLIVLRTFSKAYGLA 227 (359)
T ss_pred HhhcCCcccccHHHHHHhcC-CEEEEEechHhhcCc
Confidence 86542111 1111111111 124446888988754
No 276
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=98.47 E-value=3.3e-06 Score=97.18 Aligned_cols=145 Identities=12% Similarity=0.086 Sum_probs=103.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecC
Q psy13453 559 ACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSD 638 (764)
Q Consensus 559 ~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~ 638 (764)
....+-+.+.+|+.+.+|.+.. -.....++|+|+++++...+.+.. . ++..|++.+
T Consensus 87 G~~~LR~aiA~~l~~~~~~~~~-----v~~~~Iiit~Ga~~al~~l~~~l~-----~--------------pGd~Vlv~~ 142 (468)
T PLN02450 87 GLPAFKNALAEFMSEIRGNKVT-----FDPNKLVLTAGATSANETLMFCLA-----E--------------PGDAFLLPT 142 (468)
T ss_pred ChHHHHHHHHHHHHHhhCCCCC-----cChHHeEEccChHHHHHHHHHHhC-----C--------------CCCEEEECC
Confidence 3345667777888777664311 012357889999998665554321 1 122455665
Q ss_pred CcchhHHHHHH-hCCCceEEEecC--CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc---cHHHHHHHHHh
Q psy13453 639 QSNSSVEKSAI-IGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD---NLEELGPICQE 712 (764)
Q Consensus 639 ~aH~Sv~kAa~-~lGl~v~~Vp~d--~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD---pl~eIa~i~~~ 712 (764)
-........+. ..|.+++.||++ +++.+|+++|++++++..+++..+-+|+.+..++.||.+- .+++|.++|++
T Consensus 143 P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~ 222 (468)
T PLN02450 143 PYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITA 222 (468)
T ss_pred CCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHH
Confidence 56666666666 489999999985 4567899999999987666666676777788999999985 56677888999
Q ss_pred cCCEEEEeccccccc
Q psy13453 713 YNIWLHVDAAYAGSA 727 (764)
Q Consensus 713 ~glwLHVDaA~Gg~~ 727 (764)
|++|+.+|-+|+...
T Consensus 223 ~~~~iI~DE~Y~~~~ 237 (468)
T PLN02450 223 KNIHLISDEIYSGTV 237 (468)
T ss_pred CCcEEEEEccccccc
Confidence 999999999998753
No 277
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=98.47 E-value=6.8e-06 Score=91.97 Aligned_cols=174 Identities=14% Similarity=0.055 Sum_probs=113.5
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCC-cEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccC
Q psy13453 552 FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPG-GGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRN 630 (764)
Q Consensus 552 ~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~-~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~ 630 (764)
..|...+....+-+.+.+|+.+..|++-+ .. ..++|+|++++...++.+.. . +
T Consensus 62 ~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-------~~~~I~it~Gs~~al~~~~~~l~----~---------------~ 115 (388)
T PRK07366 62 HGYLLFHGTLDFREAAAQWYEQRFGLAVD-------PETEVLPLIGSQEGTAHLPLAVL----N---------------P 115 (388)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCcCC-------CcCeEEECCCcHHHHHHHHHHhC----C---------------C
Confidence 34544455667778888888887776432 12 36778999998766554321 1 1
Q ss_pred ceEEEecCCcchhHHHHHHhCCCceEEEecCCC--CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHH
Q psy13453 631 KLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDN--GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEE 705 (764)
Q Consensus 631 ~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~--g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~e 705 (764)
+..|++.+=+.......++..|.+++.||.+++ +.+|++++++.+.+. +-+|+.+..++.||.+ +.+++
T Consensus 116 gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~p~NPTG~~~s~~~~~~ 189 (388)
T PRK07366 116 GDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQ------ARLMVLSYPHNPTTAIAPLSFFQE 189 (388)
T ss_pred CCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhccc------ceEEEEeCCCCCCCccCCHHHHHH
Confidence 124556666666677888899999999999743 468888888776432 3355666689999998 45667
Q ss_pred HHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcc-c--EEEEcCCccCCCC
Q psy13453 706 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYV-D--SFDFNTHKWLLVN 757 (764)
Q Consensus 706 Ia~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~a-D--Sit~d~HK~l~~P 757 (764)
|+++|++||+|+.+|-+|+-...--......+..+... + -+.-++.|.++.|
T Consensus 190 l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~ 244 (388)
T PRK07366 190 AVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMG 244 (388)
T ss_pred HHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCc
Confidence 77889999999999999986542111101111122111 2 2346899988655
No 278
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.47 E-value=7.2e-07 Score=97.26 Aligned_cols=172 Identities=17% Similarity=0.101 Sum_probs=123.6
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCce
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKL 632 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~ 632 (764)
.|..+--..++|..+++...+|||..-. -+=.-+||.||+.+..+-.+. ... =+
T Consensus 63 yYgGce~VD~vE~laierak~LFga~~a----------nVQPhSGs~AN~av~~All~p---GDt-------------im 116 (413)
T COG0112 63 YYGGCEYVDEVEELAIERAKKLFGAEYA----------NVQPHSGSQANQAVYLALLQP---GDT-------------IM 116 (413)
T ss_pred ccCCCeeHHHHHHHHHHHHHHHhCCCcc----------ccCCCCchHHHHHHHHHHcCC---CCe-------------Ee
Confidence 4456677889999999999999998631 123346889998776643221 100 01
Q ss_pred EEEecCCcchhHHHHHHhCCC--ceEEEecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHH
Q psy13453 633 VAYTSDQSNSSVEKSAIIGDV--PVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPI 709 (764)
Q Consensus 633 vi~~S~~aH~Sv~kAa~~lGl--~v~~Vp~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i 709 (764)
-+=.+.-.|-+--......|. ++..-++| +++.||.|++++.+.+. +|-+|+ +|.+.+--.-|++++++|
T Consensus 117 gm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~-----kPK~ii--~G~SaY~r~id~~~~reI 189 (413)
T COG0112 117 GLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEV-----KPKLII--AGGSAYSRPIDFKRFREI 189 (413)
T ss_pred cccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHh-----CCCEEE--ECccccccccCHHHHHHH
Confidence 112344444443322233343 66677788 67999999999999886 366664 577777778899999999
Q ss_pred HHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCc
Q psy13453 710 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDC 760 (764)
Q Consensus 710 ~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~ 760 (764)
|++.|.+|-+|.||-.+++....+. .-++.||-+|.+.||.|..|.|-
T Consensus 190 ad~VGA~L~~DmAHiaGLVA~G~~p---~P~~~AdvVTtTTHKTlrGPrGG 237 (413)
T COG0112 190 ADEVGAYLMVDMAHVAGLIAGGVHP---NPLPHADVVTTTTHKTLRGPRGG 237 (413)
T ss_pred HHHhCceEEehHHHHHHHHhcccCC---CCCCccceEeCCcccCCCCCCce
Confidence 9999999999999988877665544 34678999999999999999884
No 279
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=98.47 E-value=1.2e-06 Score=97.95 Aligned_cols=177 Identities=16% Similarity=0.127 Sum_probs=109.1
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 554 WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
|.......++|..+.+...++||.++... ..-+=.-+||.||+.++.+-.+. .. .=+.
T Consensus 58 y~G~~~id~iE~la~~ra~~lF~~~~~~w------~anvqp~SGs~An~av~~aLl~p---GD-------------~Im~ 115 (399)
T PF00464_consen 58 YGGCEYIDEIEELAIERAKELFGAEPKEW------YANVQPHSGSQANLAVYMALLKP---GD-------------TIMG 115 (399)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHT-STTTE------EEE---SSHHHHHHHHHHHHT-T---T--------------EEEE
T ss_pred ccCcchhhHHHHHHHHHHHHHhCCCcccc------eEEeecCCchHHHHHHHHHHHhh---cC-------------cEEe
Confidence 34456788999999999999999975311 12233468899997776643221 00 0011
Q ss_pred EEecCCcchhHHHHHHh-----C--CCceEEEecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHH
Q psy13453 634 AYTSDQSNSSVEKSAII-----G--DVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEE 705 (764)
Q Consensus 634 i~~S~~aH~Sv~kAa~~-----l--Gl~v~~Vp~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~e 705 (764)
+=.+.-.|.|-...... . ..++...++| +++.||.+++++.+++. +|-+|++ |.+.+--.-|+++
T Consensus 116 l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~-----kPklIi~--G~S~y~~~~d~~~ 188 (399)
T PF00464_consen 116 LSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEH-----KPKLIIC--GASSYPRPIDFKR 188 (399)
T ss_dssp EEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH-------SEEEE--E-SSTSS---HHH
T ss_pred cChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhc-----CCCEEEE--CchhccCccCHHH
Confidence 22344456664333222 2 2356777888 78999999999999875 3656653 3344455568999
Q ss_pred HHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 706 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 706 Ia~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+++||++.|.+|++|+||-++++....+..- ++.||.+|.+.||.|..|.+ |++
T Consensus 189 ~reIad~vga~l~~D~sH~~GLIa~g~~~~P---~~~ADvvt~sThKtl~GPrg-giI 242 (399)
T PF00464_consen 189 FREIADEVGAYLMADISHIAGLIAGGLFPNP---FPYADVVTGSTHKTLRGPRG-GII 242 (399)
T ss_dssp HHHHHHHTT-EEEEE-TTTHHHHHTTSS--G---CCTSSEEEEESSGGG-SSS--EEE
T ss_pred HHHHHHhcCcEEEecccccccceehheecCc---cccceEEEeeccccccccCc-eEE
Confidence 9999999999999999998887776555433 45689999999999999987 443
No 280
>PRK06290 aspartate aminotransferase; Provisional
Probab=98.47 E-value=6.4e-06 Score=93.23 Aligned_cols=167 Identities=18% Similarity=0.067 Sum_probs=114.4
Q ss_pred chHHHHHHHHHHHHHHHcCCC-ccccCCCCCCC-cEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 558 PACTELEVLVMNWLGKALGLP-EEFLNCSPGPG-GGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 558 p~~t~lE~~v~~~la~llG~p-~~~~~~~~~~~-~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
.....+-+.+.+|+.+..|+. -+ .. ..++|+|++++..+++.+.. . +...|+
T Consensus 81 ~G~~~lr~aia~~~~~~~g~~~~~-------~~~~I~it~Gs~~al~~~~~~~~----~---------------~gd~Vl 134 (410)
T PRK06290 81 NGIQEFKEAAARYMEKVFGVKDID-------PVTEVIHSIGSKPALAMLPSCFI----N---------------PGDVTL 134 (410)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcCC-------CcceEEEccCHHHHHHHHHHHhC----C---------------CCCEEE
Confidence 455677788888888877764 21 12 57889999998655554221 1 112455
Q ss_pred ecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHHHHHH
Q psy13453 636 TSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEELGPIC 710 (764)
Q Consensus 636 ~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eIa~i~ 710 (764)
+..-++......++..|.+++.||.++ ++.+|+++|++++.+. +-+|+.+..++.||.+-+ +++|.++|
T Consensus 135 v~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~nP~NPTG~v~s~e~l~~l~~la 208 (410)
T PRK06290 135 MTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEK------AKLLYLNYPNNPTGAVATKEFYEEVVDFA 208 (410)
T ss_pred EeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhccc------ceEEEEECCCCCCCcCCCHHHHHHHHHHH
Confidence 666666667778889999999999985 4678999999888542 337777778999999966 67788889
Q ss_pred HhcCCEEEEeccccccccccchhhhh--hcCCCcccEEEEcCCccCCCC
Q psy13453 711 QEYNIWLHVDAAYAGSALLLPEYAHL--KRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 711 ~~~glwLHVDaA~Gg~~l~~~~~r~~--l~gie~aDSit~d~HK~l~~P 757 (764)
++||+|+.+|-+|+....- ...... +.+....+-+.-++.|.++.|
T Consensus 209 ~~~~~~iI~DEaY~~~~~~-~~~~s~~~~~~~~~~~I~i~SfSK~~g~~ 256 (410)
T PRK06290 209 KENNIIVVQDAAYAALTFD-GKPLSFLSVPGAKEVGVEIHSLSKAYNMT 256 (410)
T ss_pred HHcCeEEEEecchhhceeC-CCCcChhcCCCccccEEEEeechhhcCCc
Confidence 9999999999999864321 111111 111222346677889988654
No 281
>PRK05967 cystathionine beta-lyase; Provisional
Probab=98.46 E-value=1.8e-06 Score=97.05 Aligned_cols=130 Identities=15% Similarity=0.133 Sum_probs=95.8
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHH----HHHhCCCceEEEecCCCCc
Q psy13453 590 GGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEK----SAIIGDVPVRQLRSDDNGV 665 (764)
Q Consensus 590 ~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~k----Aa~~lGl~v~~Vp~d~~g~ 665 (764)
..+++++|+.|+..++.+. .. +...|+++...+.+... .+...|++++.++.+
T Consensus 81 ~~v~~sSG~aAi~~~l~al----l~---------------~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~---- 137 (395)
T PRK05967 81 GTILVPSGLAAVTVPFLGF----LS---------------PGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE---- 137 (395)
T ss_pred CEEEECcHHHHHHHHHHHh----cC---------------CCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC----
Confidence 3578888888877666432 11 12357788888877654 346678888887643
Q ss_pred ccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccE
Q psy13453 666 LRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDS 745 (764)
Q Consensus 666 md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDS 745 (764)
+.++++++|++. +-+|+++..++.++.+.||++|+++|+++|+++.||.+|+.....-| +--| ||-
T Consensus 138 -~~e~l~~al~~~------TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~p----l~~G---aDi 203 (395)
T PRK05967 138 -IGAGIAKLMRPN------TKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYFRP----LDFG---VDI 203 (395)
T ss_pred -CHHHHHHhcCcC------ceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceecCh----hHcC---CCE
Confidence 347788888654 33899999889999999999999999999999999999987543322 2223 599
Q ss_pred EEEcCCccCCC
Q psy13453 746 FDFNTHKWLLV 756 (764)
Q Consensus 746 it~d~HK~l~~ 756 (764)
+.-+..|+++.
T Consensus 204 vv~S~tKy~~G 214 (395)
T PRK05967 204 SIHAATKYPSG 214 (395)
T ss_pred EEEecccccCC
Confidence 99999998653
No 282
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=98.46 E-value=4.4e-06 Score=93.72 Aligned_cols=169 Identities=15% Similarity=0.107 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
....+.+.+++++|.+ ..+|+++||+||..|+..+|.....+.+. ...++.++.+...-|-
T Consensus 74 ~~~~~~~~l~~~~~~~-----------~~~~~~SGs~A~e~al~~~~~~~~~~~~~--------~~~~~~vl~~~~~~Hg 134 (400)
T PTZ00125 74 VLGLAEKYITDLFGYD-----------KVLPMNSGAEAGETALKFARKWGYEVKGI--------PENQAKIIFCNGNFSG 134 (400)
T ss_pred HHHHHHHHHHhCCCCC-----------EEEEeCCcHHHHHHHHHHHHHHHHhccCC--------CCCCCeEEEECCCcCC
Confidence 4445555666666654 35799999999999999998653222100 0012345667777787
Q ss_pred hHHHHHHhCCCc------------eEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc----HHHH
Q psy13453 643 SVEKSAIIGDVP------------VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN----LEEL 706 (764)
Q Consensus 643 Sv~kAa~~lGl~------------v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp----l~eI 706 (764)
+...+....+-. +..++. -|+++|++.++. ..+-+|+.....+.+|.+-| +++|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~-----~~~~~v~~ep~~~~~G~~~~~~~~l~~l 204 (400)
T PTZ00125 135 RTIGACSASTDPKCYNNFGPFVPGFELVDY-----NDVEALEKLLQD-----PNVAAFIVEPIQGEAGVIVPDDGYLKQV 204 (400)
T ss_pred ccHHHHhhcCCcchhccCCCCCCCceEeCC-----CCHHHHHHHhCC-----CCeEEEEEcCccCCCCCccCCHHHHHHH
Confidence 766665544321 112221 389999998851 12446666555677888776 9999
Q ss_pred HHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc-Cceee
Q psy13453 707 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF-DCSAM 763 (764)
Q Consensus 707 a~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~-~~g~l 763 (764)
+++|++||++|++|.+|.+.......+.....++ ..|-++++ |+++.++ .+|++
T Consensus 205 ~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~-~pd~~~~s--K~l~~g~~~ig~v 259 (400)
T PTZ00125 205 YELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGV-KPDIVLLG--KALSGGLYPISAV 259 (400)
T ss_pred HHHHHHcCCEEEEeccccCCCccchhhHHHhcCC-CCCEEEEc--ccccCCCcCcEEE
Confidence 9999999999999999876321111111222344 45777765 9998765 56654
No 283
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=98.46 E-value=4.9e-06 Score=92.40 Aligned_cols=167 Identities=16% Similarity=-0.012 Sum_probs=114.8
Q ss_pred chHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEec
Q psy13453 558 PACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTS 637 (764)
Q Consensus 558 p~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S 637 (764)
+....+.+.+.+|+.+..|++-+ ....++|+|++++...++.+..+ +...|++.
T Consensus 65 ~g~~~lr~aia~~~~~~~~~~~~-------~~~I~it~G~~~~l~~~~~~~~~-------------------~gd~v~v~ 118 (368)
T PRK03317 65 RDAVALRADLAAYLTAQTGVGLT-------VENVWAANGSNEILQQLLQAFGG-------------------PGRTALGF 118 (368)
T ss_pred CchHHHHHHHHHHhhhhccCCCC-------hhhEEECCCHHHHHHHHHHHhcC-------------------CCCEEEEe
Confidence 44566777788888887776432 23578899999987666553311 11235556
Q ss_pred CCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEE
Q psy13453 638 DQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWL 717 (764)
Q Consensus 638 ~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwL 717 (764)
.-+......++...|.+++.+|.++++.+|+++|++++.+.. +-+|+.+..++.+|.+-+.+++.++|+.+++|+
T Consensus 119 ~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~-----~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~l 193 (368)
T PRK03317 119 VPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHR-----PDVVFLTSPNNPTGTALPLDDVEAILDAAPGIV 193 (368)
T ss_pred CCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceE
Confidence 666666777788888888888877778999999999986421 225566778899999999999999999999999
Q ss_pred EEecccccccccc-chhhhhhcCCCcccEEE-EcCCccCCCC
Q psy13453 718 HVDAAYAGSALLL-PEYAHLKRGLEYVDSFD-FNTHKWLLVN 757 (764)
Q Consensus 718 HVDaA~Gg~~l~~-~~~r~~l~gie~aDSit-~d~HK~l~~P 757 (764)
++|-+|+.+..-. +........ .-+.|. -++.|.++.|
T Consensus 194 I~DE~y~~~~~~~~~~~~~~~~~--~~~~i~~~SfSK~~g~~ 233 (368)
T PRK03317 194 VVDEAYAEFRRSGTPSALTLLPE--YPRLVVSRTMSKAFAFA 233 (368)
T ss_pred EEeCCchhhcccCCcCHHHHHHh--CCCEEEEEechhhhccc
Confidence 9999998743111 111111111 113443 3999988754
No 284
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=98.46 E-value=6.6e-06 Score=91.40 Aligned_cols=170 Identities=14% Similarity=0.060 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+++++++|.+ ..+++.||+++|..++.++|...... + ..++-+++.+..-|
T Consensus 69 ~~~~~l~~~la~~~g~~-----------~~~~~~sg~~a~~~a~~~~~~~~~~~-~----------~~~~~vi~~~~~yh 126 (379)
T TIGR00707 69 EPQEELAEKLVEHSGAD-----------RVFFCNSGAEANEAALKLARKYTGDK-G----------KEKKKIIAFENSFH 126 (379)
T ss_pred HHHHHHHHHHHhhCCCC-----------EEEEeCCcHHHHHHHHHHHHHHhhcc-C----------CCCCeEEEECCCcC
Confidence 44556667888888764 36899999999999998876532210 0 00123555666666
Q ss_pred hhHHHHHHhCCCce---EEEecCCCCcc----cHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc----ccHHHHHHHH
Q psy13453 642 SSVEKSAIIGDVPV---RQLRSDDNGVL----RGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF----DNLEELGPIC 710 (764)
Q Consensus 642 ~Sv~kAa~~lGl~v---~~Vp~d~~g~m----d~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai----Dpl~eIa~i~ 710 (764)
.+...+....+... ...+...+... |+++|++.+.+. +-+|+.+..++.+|.+ +++++|.++|
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~ 200 (379)
T TIGR00707 127 GRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDE------TAAVIVEPIQGEGGVNPASAEFLKALREIC 200 (379)
T ss_pred CccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhC------eeEEEEEccccCCCCccCCHHHHHHHHHHH
Confidence 55444433322111 11222222222 899999988653 3355556555555543 4689999999
Q ss_pred HhcCCEEEEeccccccccccch-hhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 711 QEYNIWLHVDAAYAGSALLLPE-YAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 711 ~~~glwLHVDaA~Gg~~l~~~~-~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
++||+++++|.+|.+.. ...+ ......++ ..|.++ +.|.++..+.+|.+
T Consensus 201 ~~~~~~~i~De~~~~~~-~~g~~~~~~~~~~-~~d~~t--~sK~~~~G~riG~~ 250 (379)
T TIGR00707 201 KDKDALLIFDEVQTGIG-RTGKFFAYEHYGI-EPDIIT--LAKGLGGGVPIGAT 250 (379)
T ss_pred HHcCCEEEEeccccCCC-ccchhhhHHhcCC-CCCEEE--EcccccCCcccEEE
Confidence 99999999999997632 2211 11112233 245554 68999965666654
No 285
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=98.46 E-value=1.7e-06 Score=96.48 Aligned_cols=157 Identities=12% Similarity=0.051 Sum_probs=101.6
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEE
Q psy13453 555 LSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVA 634 (764)
Q Consensus 555 ~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi 634 (764)
...|...++|+. ++++.|.. ..+.++||++|+..++. + +.. ...|
T Consensus 51 ~~~p~~~~le~~----lA~leg~~-----------~~v~~~sG~aAi~~~l~-~----l~~---------------GD~V 95 (364)
T PRK07269 51 TKNPTRAKLEET----LAAIESAD-----------YALATSSGMSAIVLAFS-V----FPV---------------GSKV 95 (364)
T ss_pred CCCccHHHHHHH----HHHHhCCC-----------eEEEeCCHHHHHHHHHH-H----hCC---------------CCEE
Confidence 356777778874 45555532 47899999999877763 2 111 1124
Q ss_pred EecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcC
Q psy13453 635 YTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYN 714 (764)
Q Consensus 635 ~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~g 714 (764)
+++...+-....-.....-.. .+.+ .+.+|+++++++|++.. -+|+....++.+|.+-|+++|+++|+++|
T Consensus 96 I~~~~~yg~~~~~~~~~~~~~-~~~~--~~~~d~~~l~~~i~~~T------klV~lesP~NPtg~~~di~~I~~la~~~g 166 (364)
T PRK07269 96 VAVRDLYGGSFRWFNQQEKEG-RFHF--TYANTEEELIAAIEEDT------DIVYIETPTNPLMVEFDIEKVAKLAHAKG 166 (364)
T ss_pred EEecCCcCchHHHHHHHHhcC-cEEE--EecCCHHHHHHhcCcCc------eEEEEECCCCCCCeeeCHHHHHHHHHHcC
Confidence 444433322111111100000 1111 23368999999987543 38888999999999999999999999999
Q ss_pred CEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC--cee
Q psy13453 715 IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD--CSA 762 (764)
Q Consensus 715 lwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~--~g~ 762 (764)
+++.||.||+......| . + ..||-++.|+||+++.+-+ .|+
T Consensus 167 i~vvvD~t~~~~~~~~p----l--~-~gaDivv~S~tK~l~g~~d~~gG~ 209 (364)
T PRK07269 167 AKVIVDNTFYSPIYQRP----I--E-LGADIVLHSATKYLSGHNDVLAGV 209 (364)
T ss_pred CEEEEECCCcccccCCc----h--h-hCCcEEEecCceeccCCCcccceE
Confidence 99999999876543222 1 1 1479999999999998765 454
No 286
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=98.44 E-value=4.9e-06 Score=93.54 Aligned_cols=167 Identities=14% Similarity=0.043 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
...++.+.|+++.+.+ ..+|+++||+||..|+++||.......+.. ..++-+|.+...-|-
T Consensus 83 ~~~~l~~~l~~~~~~~-----------~~~~~~SGseA~e~Alk~a~~~~~~~~g~~--------~~r~~ii~~~~~~HG 143 (396)
T PRK04073 83 QLGPWYEKVAKLTGKD-----------MVLPMNTGAEAVETAIKAARRWAYDVKGVE--------PNKAEIIACEGNFHG 143 (396)
T ss_pred HHHHHHHHHHhcCCCC-----------eEEEcCChHHHHHHHHHHHHHHhhhccCCC--------CCCCEEEEECCCcCC
Confidence 3344556666666543 368999999999999999997632210000 001235566666776
Q ss_pred hHHHHHHhCCC------------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc----HHHH
Q psy13453 643 SVEKSAIIGDV------------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN----LEEL 706 (764)
Q Consensus 643 Sv~kAa~~lGl------------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp----l~eI 706 (764)
+..-+..+.+- ++..+|.+ |+++|++.+.+. +.+|++....+.+|.+-| +++|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~i~~~------~~~viiep~~~~~G~~~~~~~~l~~l 212 (396)
T PRK04073 144 RTMAAVSLSSEEEYKRGFGPMLPGIKKIPYG-----DLEALKAAITPN------TAAFLVEPIQGEAGINIPPEGFLKAA 212 (396)
T ss_pred CCHHHHhhcCCcccccCCCCCCCCceEeCCC-----CHHHHHHhcccC------eEEEEEcCccCCCCCccCCHHHHHHH
Confidence 66556555432 12333322 688898887532 457777777788888754 8999
Q ss_pred HHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCcee
Q psy13453 707 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSA 762 (764)
Q Consensus 707 a~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~ 762 (764)
.++|++||+++++|.+|.+.-.....+.....++ ..|-+++ .|.++.+ +..|.
T Consensus 213 ~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~-~pdi~~~--sK~lg~gg~~ig~ 266 (396)
T PRK04073 213 RELCKEENVLFIADEIQTGLGRTGKLFACDWDNV-TPDMYIL--GKALGGGVFPISC 266 (396)
T ss_pred HHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCC-CCCEEEe--cccccCCCCcceE
Confidence 9999999999999999987422111111122344 3577765 5987765 44444
No 287
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.44 E-value=7.3e-06 Score=92.18 Aligned_cols=229 Identities=12% Similarity=0.095 Sum_probs=125.3
Q ss_pred ChhhHhhcCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHHHH-HHH--Hhhccc-CccccCCc
Q psy13453 483 EPGYLASLVPGEMPEEGEDWRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIVGD-MLS--GAFGLI-GFSWLSSP 558 (764)
Q Consensus 483 ~p~~l~~~l~~~lP~~g~~~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~lad-~l~--~~lN~n-~~~~~~sp 558 (764)
-|.+++..-+..+|+. .+-.++++++.++...+.. ...|++-=...--.++++.+ ++. .++... ....+.|.
T Consensus 31 IP~~i~~~~~~~lp~~-~sE~e~~r~~~~la~kN~~---~~~fiG~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQpEisQ 106 (429)
T PF02347_consen 31 IPEEIRLKKPLNLPEP-LSEYELLRHLERLASKNKS---YTSFIGAGSYTHYVPAVIDRNILSRPEFYTAYTPYQPEISQ 106 (429)
T ss_dssp S-GGG-SS-----------HHHHHHHHHHHHTTS-----TTS---CTTT-----HHHHH-HHCCHHCCCS-STTSGGGBH
T ss_pred CCHhhcCCCCCCCCCC-CCHHHHHHHHHHHHhcCCC---CCccccccccCceeChhhcCccccChhhhccCCCCCcHHHH
Confidence 3555543334455543 7888999999997755443 33454443333445666666 332 122221 12234567
Q ss_pred hHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecC
Q psy13453 559 ACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSD 638 (764)
Q Consensus 559 ~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~ 638 (764)
..-+..-+.-.++++|.|++-. ...+..|+|.. -.|+.+|.+....+ +-.+++|+
T Consensus 107 G~Lq~lfe~Qs~i~eLTGmdva---------NaSlyd~atA~-aEa~~ma~r~~~~~---------------~~~vlv~~ 161 (429)
T PF02347_consen 107 GRLQALFEYQSMICELTGMDVA---------NASLYDGATAA-AEAMLMAVRATKRK---------------RNKVLVPE 161 (429)
T ss_dssp HHHHHHHHHHHHHHHHHTSSEE----------SEBSSCCHHH-HHHHHHHHHHHTT------------------EEEEET
T ss_pred HHHHHHHHHHHHHHHhhCCCcc---------CCCCCChhHHH-HHHHHHHHHhcccC---------------CcEEEEcC
Confidence 7777888889999999999862 23455666633 22333333221111 12588999
Q ss_pred CcchhHHHHHH----hCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcC
Q psy13453 639 QSNSSVEKSAI----IGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYN 714 (764)
Q Consensus 639 ~aH~Sv~kAa~----~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~g 714 (764)
..|.......+ ..|+.++.+|+++++..| +.....|+.+..+| .|.|+++++|+++++++|
T Consensus 162 ~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d--------------~~~~a~v~vq~Pn~-~G~~ed~~~i~~~~h~~g 226 (429)
T PF02347_consen 162 SLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD--------------DDDTAAVMVQNPNT-FGVFEDIKEIADIAHAAG 226 (429)
T ss_dssp TS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB---------------STTEEEEEEESS-T-TSB--THHHHHHHHHHTT
T ss_pred CcChhhHHHHHHhhhhCCeEEEEecccccCCcc--------------ccCeEEEEeecCCC-CceEeeHHHHHHHHHHcC
Confidence 99988766433 368899999999888888 22467999999986 699999999999999999
Q ss_pred CEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCcee
Q psy13453 715 IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSA 762 (764)
Q Consensus 715 lwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~ 762 (764)
..+.+ ||--.+......-.. =.||-+ +.-||.++.|.+.|.
T Consensus 227 al~~~-~ad~~aL~~l~~Pge-----~GADI~-vg~~Q~fg~p~~~GG 267 (429)
T PF02347_consen 227 ALVIV-GADPNALGGLKSPGE-----YGADIV-VGEHQTFGIPMGFGG 267 (429)
T ss_dssp -EEEE-CGGCCGCCTC--GGG-----GT-SEE-EECCTTTT---CCC-
T ss_pred CEEEE-ecCHHHHhCcCChhh-----cCccEE-eeCCCCCcccCCCCC
Confidence 99887 764443322211011 146888 777999999998873
No 288
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=98.44 E-value=1.4e-05 Score=89.98 Aligned_cols=164 Identities=14% Similarity=0.123 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc-
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS- 640 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a- 640 (764)
....++.+.|++++|++. .+|+++|++||..|+..||.......+. ..++.+|++.+.+
T Consensus 79 ~~~~~l~~~l~~~~~~~~-----------~~~~~SGs~A~e~ai~~a~~~~~~~~~~---------~~~~~~i~~~~~~y 138 (401)
T TIGR01885 79 DVFGEFAEYVTKLFGYDK-----------VLPMNTGAEAVETAIKLARKWGYKVKGI---------PENQAIIVSAKGNF 138 (401)
T ss_pred HHHHHHHHHHHhhcCCCE-----------EEEeCccHHHHHHHHHHHHHHhhhhcCC---------CCCCCEEEEECCCc
Confidence 344455556777777643 5799999999999999998864221000 0113345555555
Q ss_pred chhHHHHHHhCCC------------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc----HH
Q psy13453 641 NSSVEKSAIIGDV------------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN----LE 704 (764)
Q Consensus 641 H~Sv~kAa~~lGl------------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp----l~ 704 (764)
|-+..-+..+.|- ++..+|-+ |+++|++.|++. +....+|+.-.....+|.+-| |+
T Consensus 139 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~ 210 (401)
T TIGR01885 139 HGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYN-----NLEALEEALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLK 210 (401)
T ss_pred CcccHHHHhCcCCcccccccCCCCCCceEeCCC-----CHHHHHHHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHH
Confidence 5565555555431 23333322 689999988643 223334444333344577765 99
Q ss_pred HHHHHHHhcCCEEEEeccccccccccchh-hhhhcCCCcccEEEEcCCccCCCC
Q psy13453 705 ELGPICQEYNIWLHVDAAYAGSALLLPEY-AHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 705 eIa~i~~~~glwLHVDaA~Gg~~l~~~~~-r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+|+++|++||+++++|.+|.|.-. ..+. .....++ ..|.++++ |.++..
T Consensus 211 ~l~~l~~~~~~lli~DEv~~g~g~-~G~~~~~~~~~~-~~di~~~g--K~l~~g 260 (401)
T TIGR01885 211 KVRELCTKHNVLLIADEIQTGLGR-TGKLLCVDHENV-KPDIVLLG--KALSGG 260 (401)
T ss_pred HHHHHHHHcCCEEEEechhhCCCc-cchhhHHhhcCC-CCCEEEee--ccccCC
Confidence 999999999999999999865211 1111 1112344 46888775 987643
No 289
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.39 E-value=6.4e-06 Score=92.40 Aligned_cols=147 Identities=16% Similarity=0.160 Sum_probs=103.7
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCC-CcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGP-GGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~-~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
.|........+-+.+.+|+.+..|++... .. ...++|+|++++...++.+.. .. + ..
T Consensus 59 ~Y~~~~G~~~lr~aia~~~~~~~~~~~~~-----~~~~~i~it~Ga~~al~~~~~~l~----~~-----------g--d~ 116 (393)
T TIGR03538 59 TYPTTKGLPELRQAIARWLERRFDLPTGV-----DPERHVLPVNGTREALFAFAQAVI----NP-----------G--QA 116 (393)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCcccC-----CCCceEEECCCcHHHHHHHHHHHc----CC-----------C--Cc
Confidence 34433445667778888888887776311 11 246789999998766655321 10 0 01
Q ss_pred eEEEecCCcchhHHHHHHhCCCceEEEecCCC--CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHH
Q psy13453 632 LVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDN--GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEEL 706 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~--g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eI 706 (764)
..|++.+-+.......+...|++++.||++++ +.+|+++|++++.+. +-+|+.+..++.||.+-+ +++|
T Consensus 117 ~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~p~NPtG~~~s~~~~~~l 190 (393)
T TIGR03538 117 PLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRR------CQLLFVCSPGNPTGAVLSLDTLKKL 190 (393)
T ss_pred ceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhc------ceEEEEeCCCCCcCcccCHHHHHHH
Confidence 23556655666667778889999999999643 578999999988653 236666788999998855 8888
Q ss_pred HHHHHhcCCEEEEeccccccc
Q psy13453 707 GPICQEYNIWLHVDAAYAGSA 727 (764)
Q Consensus 707 a~i~~~~glwLHVDaA~Gg~~ 727 (764)
+++|++||+|+.+|.+|.-..
T Consensus 191 ~~~a~~~~~~ii~De~Y~~~~ 211 (393)
T TIGR03538 191 IELADQYGFIIASDECYSELY 211 (393)
T ss_pred HHHHHHCCEEEEECcchhhcc
Confidence 999999999999999998643
No 290
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=98.39 E-value=2.6e-06 Score=94.26 Aligned_cols=155 Identities=14% Similarity=-0.006 Sum_probs=105.8
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
++.+.+++.+|.+++ ..++|+|+++++...+.+. ... ++..|++..-++....
T Consensus 64 ~Lr~aia~~~~~~~~---------~I~it~Gs~~~i~~~~~~~----~~~--------------g~d~vlv~~P~y~~y~ 116 (354)
T PRK04635 64 ELINAYSAYAGVAPE---------QILTSRGADEAIELLIRAF----CEP--------------GQDSIACFGPTYGMYA 116 (354)
T ss_pred HHHHHHHHHhCcCHH---------HEEEeCCHHHHHHHHHHHh----cCC--------------CCCeEEEcCCChHHHH
Confidence 345566667788764 6889999999876665432 110 1123556666666677
Q ss_pred HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc-CCEEEEecccc
Q psy13453 646 KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY-NIWLHVDAAYA 724 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~-glwLHVDaA~G 724 (764)
..++..|++++.||+++++.+|++.+++ + + .+-+|+.+..++.||.+-+.+++.++++.. ++++.+|.||.
T Consensus 117 ~~~~~~g~~v~~v~~~~~~~~~~~~l~~-~-~------~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~ 188 (354)
T PRK04635 117 ISAETFNVGVKALPLTADYQLPLDYIEQ-L-D------GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYI 188 (354)
T ss_pred HHHHHcCCEEEEEecCCCCCCCHHHHHh-c-c------CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchH
Confidence 7788999999999998888999999873 3 2 234777889999999999999999998863 79999999997
Q ss_pred ccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 725 GSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 725 g~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
-+... ..........++. -+.-+++|+++.|
T Consensus 189 ~~~~~-~s~~~~~~~~~~~-iv~~S~SK~~~l~ 219 (354)
T PRK04635 189 EFCPE-YSVADLLASYPNL-VVLRTLSKAFALA 219 (354)
T ss_pred hhccC-cchHHHHhhCCCE-EEEechHHHhhhh
Confidence 54311 1111111111111 3567899998733
No 291
>PRK07908 hypothetical protein; Provisional
Probab=98.38 E-value=8.5e-06 Score=89.85 Aligned_cols=153 Identities=16% Similarity=0.066 Sum_probs=102.4
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
.+++++++.+|.++ ...++|+|+++++..++. ..+ .+ +++ ..-+-....
T Consensus 62 ~lr~aia~~~~~~~---------~~I~it~Ga~~al~~~~~-----l~~---------------~~-viv-~~P~y~~~~ 110 (349)
T PRK07908 62 RARAAVAARHGRTP---------DEVLLLAGAAEGFALLAR-----LRP---------------RR-AAV-VHPSFTEPE 110 (349)
T ss_pred HHHHHHHHHhCcCh---------hhEEECCCHHHHHHHHHh-----cCC---------------Ce-EEE-eCCCChHHH
Confidence 45567777778765 368899999998765443 111 01 233 223333345
Q ss_pred HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccc
Q psy13453 646 KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAG 725 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg 725 (764)
..++..|++++.+|+|+++.+|+++++ +. +-+|+.+..++.||.+-+.++|.++|+ ++.|+++|.+|+-
T Consensus 111 ~~~~~~G~~i~~v~~~~~~~~d~~~l~----~~------~~~i~l~np~NPTG~~~~~~~l~~l~~-~~~~iIvDe~y~~ 179 (349)
T PRK07908 111 AALRAAGIPVHRVVLDPPFRLDPAAVP----DD------ADLVVIGNPTNPTSVLHPAEQLLALRR-PGRILVVDEAFAD 179 (349)
T ss_pred HHHHHcCCEEEeeccCcccCcChhHhc----cC------CCEEEEcCCCCCCCCCcCHHHHHHHHh-cCCEEEEECcchh
Confidence 667789999999999877889998653 11 336777888999999999999999996 4889999999975
Q ss_pred cccccchhhhhhcCCCcccEEEE-cCCccCC-CCcCceee
Q psy13453 726 SALLLPEYAHLKRGLEYVDSFDF-NTHKWLL-VNFDCSAM 763 (764)
Q Consensus 726 ~~l~~~~~r~~l~gie~aDSit~-d~HK~l~-~P~~~g~l 763 (764)
.. .. +. ..+.....-+.+.+ +++|.++ ...-+|.+
T Consensus 180 ~~-~~-~~-~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~ 216 (349)
T PRK07908 180 AV-PG-EP-ESLAGDDLPGVLVLRSLTKTWSLAGLRVGYA 216 (349)
T ss_pred hc-cC-Cc-cccccccCCCEEEEeecccccCCccceeeee
Confidence 32 11 11 11111222357777 8999876 33445655
No 292
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=98.36 E-value=1.6e-05 Score=87.40 Aligned_cols=151 Identities=12% Similarity=0.042 Sum_probs=103.7
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
.+.+++++.+|.+++ ..++|+|++++....+.+ ++ ...|++..-.+....
T Consensus 59 ~lr~~ia~~~~~~~~---------~I~~t~G~~~~l~~~~~~-----~~----------------gd~V~v~~P~y~~~~ 108 (337)
T PRK03967 59 PLREAIAEFYGLDAE---------NIAVGNGSDELISYLVKL-----FE----------------GKHIVITPPTFGMYS 108 (337)
T ss_pred HHHHHHHHHhCcCcc---------eEEEcCCHHHHHHHHHHH-----hC----------------CCeEEEeCCChHHHH
Confidence 345566666676553 578999999986543321 11 113566666776677
Q ss_pred HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccc
Q psy13453 646 KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAG 725 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg 725 (764)
.+++..|++++.|+.++++.+|+++|++.+.+ .-+|+.+..++.||.+-+.++|.++|+ +++|+++|.+|..
T Consensus 109 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~-------~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~ 180 (337)
T PRK03967 109 FYAKLNGIPVIDVPLKEDFTIDGERIAEKAKN-------ASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAE 180 (337)
T ss_pred HHHHHcCCeEEEeecCCCCCcCHHHHHHhccC-------CCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhh
Confidence 77888999999999988889999999876421 125556788999999999999999995 7999999999986
Q ss_pred cccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 726 SALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 726 ~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+. .......+...++ --+..++-|.++.|
T Consensus 181 ~~--~~~~~~~~~~~~~-vi~l~S~SK~~~l~ 209 (337)
T PRK03967 181 FS--GKSLIGLIDEYPN-LILLRTFSKAFGLA 209 (337)
T ss_pred hc--ccchHHHHhhCCC-EEEEecchHhhcch
Confidence 42 1111111211111 13457899988754
No 293
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=98.36 E-value=8.5e-06 Score=93.29 Aligned_cols=174 Identities=17% Similarity=0.161 Sum_probs=114.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecC
Q psy13453 559 ACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSD 638 (764)
Q Consensus 559 ~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~ 638 (764)
....+-+.+.+++.+.+|....+ .....++|+|+|+++.+.+.+. .. +.-.|++..
T Consensus 96 G~~~LR~aiA~~l~~~~~~~~~v-----~p~~Ivit~G~t~al~~l~~~l-----~~--------------pGD~Vlv~~ 151 (447)
T PLN02607 96 GLKSFRQAMASFMEQIRGGKARF-----DPDRIVLTAGATAANELLTFIL-----AD--------------PGDALLVPT 151 (447)
T ss_pred chHHHHHHHHHHHHHhcCCCCCc-----CHHHeEEcCChHHHHHHHHHHh-----CC--------------CCCEEEEcC
Confidence 33456666667777766532110 1236789999999875544321 11 112355555
Q ss_pred CcchhHHHHHH-hCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHHHHHHHh
Q psy13453 639 QSNSSVEKSAI-IGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEELGPICQE 712 (764)
Q Consensus 639 ~aH~Sv~kAa~-~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eIa~i~~~ 712 (764)
-....+..... ..|++++.|++++ ++.+|+++|++++++..++|.++-+|+.+..++.+|.+=+ +++|.++|++
T Consensus 152 P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~ 231 (447)
T PLN02607 152 PYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVR 231 (447)
T ss_pred CCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHH
Confidence 55555655555 4788999999873 4579999999999987777877777888899999999854 7888889999
Q ss_pred cCCEEEEeccccccccccchh---hhhhcCC------CcccEEEEcCCccCCCC
Q psy13453 713 YNIWLHVDAAYAGSALLLPEY---AHLKRGL------EYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 713 ~glwLHVDaA~Gg~~l~~~~~---r~~l~gi------e~aDSit~d~HK~l~~P 757 (764)
||+++++|-+|+....-.+.+ .....++ +++. +..++-|-++.|
T Consensus 232 ~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~-vi~s~SK~fg~~ 284 (447)
T PLN02607 232 KNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVH-IVYSLSKDLGLP 284 (447)
T ss_pred CCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEE-EEEcchhcCCCC
Confidence 999999999998754322111 1111111 1222 457889987644
No 294
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=98.36 E-value=1e-05 Score=91.20 Aligned_cols=172 Identities=10% Similarity=0.023 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
++.+.++.+++++..+++ ..+|+++|||||..|+.+||...... .. .++-+|.....-
T Consensus 77 ~~~~~~la~~l~~~~~~~-----------~v~f~~SGseA~e~Aik~ar~~~~~~--~~---------~r~~ii~~~~~y 134 (395)
T PRK03715 77 NEPMAKLAGLLTQHSCFD-----------KVFFANSGAEANEGAIKLARKWGRKH--KN---------GAYEIITFDHSF 134 (395)
T ss_pred CHHHHHHHHHHhhccCCC-----------EEEEeCCcHHHHHHHHHHHHHHhhcc--CC---------CCcEEEEECCCc
Confidence 567777788887765432 36899999999999999998653211 00 012356677788
Q ss_pred chhHHHHHHhCCCce---EEEecCCCC----cccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc----HHHHHHH
Q psy13453 641 NSSVEKSAIIGDVPV---RQLRSDDNG----VLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN----LEELGPI 709 (764)
Q Consensus 641 H~Sv~kAa~~lGl~v---~~Vp~d~~g----~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp----l~eIa~i 709 (764)
|-+..-++...|... ...|..... .-|+++|++.+.+. ..+|+..--....|.+-| +++|.++
T Consensus 135 HG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~aavi~Epv~~~gG~~~~~~~~l~~l~~l 208 (395)
T PRK03715 135 HGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDK------TVAVMLEPVQGEGGVIPATREFMQQLRAL 208 (395)
T ss_pred CCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCC------ceEEEEeCCcCCCCCccCCHHHHHHHHHH
Confidence 888777777665321 111111111 24788888887532 446666666666677766 9999999
Q ss_pred HHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 710 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 710 ~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
|++||++|++|-++.|.-..-.-+....-|+ ..|-+|+. |.++.-+..|++
T Consensus 209 ~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv-~PDi~t~g--K~lg~G~p~~av 259 (395)
T PRK03715 209 TKQHGLLLIVDEVQTGCGRTGTLFAYELSGI-EPDIMTLG--KGIGGGVPLAAL 259 (395)
T ss_pred HHHcCCEEEEeccccCCCCCcchhhHhhcCC-CCceeeeh--hhhhCCcceEEE
Confidence 9999999999999987322111111112355 47877664 877764445544
No 295
>PLN02624 ornithine-delta-aminotransferase
Probab=98.35 E-value=2e-05 Score=90.91 Aligned_cols=172 Identities=13% Similarity=0.023 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+.|++++|++. ..|+.+|||||..|++.||.....+.+.. . ....++..+..-|
T Consensus 117 ~~~~~la~~L~~~~~~~~-----------~~f~~SGseA~e~AlklAr~~~~~~~g~~-------~-~~~~ii~~~~~yH 177 (474)
T PLN02624 117 DKFPEFAEYLTSMFGYDM-----------VLPMNTGAEGVETAIKLARKWGYEKKGIP-------K-NEAIIVSCCGCFH 177 (474)
T ss_pred HHHHHHHHHHHhhcCCCe-----------EEEeCChHHHHHHHHHHHHHHHHhhcCCC-------C-CCcEEEEECCCcC
Confidence 344445566666676543 57999999999999999998532221100 0 0122344444445
Q ss_pred hhHHHHHHhCCC------------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc----HHH
Q psy13453 642 SSVEKSAIIGDV------------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN----LEE 705 (764)
Q Consensus 642 ~Sv~kAa~~lGl------------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp----l~e 705 (764)
-...-+..+.+- .+..+|-+ |++.|++.++. .+....+|+.......+|.+-| |++
T Consensus 178 G~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~---~~~~iaaiiiEpv~~~~G~v~p~~~~L~~ 249 (474)
T PLN02624 178 GRTLAAISMSCDNEATRGFGPLLPGHLKVDFG-----DLDALEKIFEE---DGDRIAAFLFEPIQGEAGVVIPPDGYLKA 249 (474)
T ss_pred CCCHHHhhcCCCccccccCCCCCCCceEeCCC-----CHHHHHHHHHh---CCCCEEEEEECCccCCCCCcCCCHHHHHH
Confidence 333333332211 12333322 68899998864 2234556777666677888766 999
Q ss_pred HHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 706 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 706 Ia~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
|+++|++||++|++|.+|.|.-.-..-+.....++ ..|-++++ |.++.. +.+|.+
T Consensus 250 l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i-~pDiv~ls--K~lggG~~pigav 305 (474)
T PLN02624 250 VRELCSKHNVLMIADEIQTGLARTGKMLACDWEEV-RPDVVILG--KALGGGVIPVSAV 305 (474)
T ss_pred HHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCC-CCCEEEec--ccccCCCCcceee
Confidence 99999999999999999986321111112222355 46888874 877755 345443
No 296
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=98.35 E-value=1.3e-05 Score=91.19 Aligned_cols=164 Identities=15% Similarity=0.082 Sum_probs=109.4
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 554 WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
|........+-+.+.+|+..-++-+ ...++|+|++++..+++.+..+ ++..
T Consensus 117 Y~~~~g~~~lr~~ia~~~~~~~~~~----------~~Iiit~G~~~al~~~~~~l~~-------------------pgd~ 167 (431)
T PRK15481 117 YGDAPVSPELHAWAARWLRDDCPVA----------FEIDLTSGAIDAIERLLCAHLL-------------------PGDS 167 (431)
T ss_pred cCCcCCCHHHHHHHHHHHhhccCCc----------CeEEEecCcHHHHHHHHHHhCC-------------------CCCE
Confidence 4333333445555666665433311 2578999999987766653211 1224
Q ss_pred EEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEe-eccCCccccccHH---HHHHH
Q psy13453 634 AYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIAT-LGTTGTCAFDNLE---ELGPI 709 (764)
Q Consensus 634 i~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~Vvat-aGTT~~GaiDpl~---eIa~i 709 (764)
|++.+-++.....++...|++++.||+|++| +|+++|++++++. +-+++.+ ..++.||.+-+.+ +|.++
T Consensus 168 Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g-~~~~~l~~~~~~~------~k~i~~~p~p~NPTG~~~s~~~~~~l~~l 240 (431)
T PRK15481 168 VAVEDPCFLSSINMLRYAGFSASPVSVDAEG-MQPEKLERALAQG------ARAVILTPRAHNPTGCSLSARRAAALRNL 240 (431)
T ss_pred EEEeCCCcHHHHHHHHHcCCeEEeeccCCCC-CCHHHHHHHHhcC------CCEEEECCCCCCCCCccCCHHHHHHHHHH
Confidence 6667777888889999999999999998766 9999999988642 2244444 7899999997765 89999
Q ss_pred HHhc-CCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCC
Q psy13453 710 CQEY-NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLL 755 (764)
Q Consensus 710 ~~~~-glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~ 755 (764)
|++| ++|+.+|-+|+-... .+ +...+.....---+.-++.|.++
T Consensus 241 a~~~~~~~ii~De~Y~~~~~-~~-~~~~~~~~~~~vi~~~SfSK~~~ 285 (431)
T PRK15481 241 LARYPQVLVIIDDHFALLSS-SP-YHSVIPQTTQRWALIRSVSKALG 285 (431)
T ss_pred HHhcCCceEEecCchhhhcc-CC-CCCCCcCCCCCEEEEeeeccccC
Confidence 9999 999999999986431 11 11111111111245668899888
No 297
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=98.34 E-value=8.9e-06 Score=91.10 Aligned_cols=169 Identities=14% Similarity=0.021 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS 643 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S 643 (764)
..++.+.|+++.+.+ ..+|++|||+||..|+++||...... +. ..++-++.....-|-+
T Consensus 75 ~~~la~~l~~~~~~~-----------~v~~~~sGseA~~~al~~ar~~~~~~-G~---------~~r~~vi~~~~~yhg~ 133 (389)
T PRK01278 75 QERLAERLVENSFAD-----------KVFFTNSGAEAVECAIKTARRYHYGK-GH---------PERYRIITFEGAFHGR 133 (389)
T ss_pred HHHHHHHHHhhCCCC-----------EEEEcCCcHHHHHHHHHHHHHHHHhc-CC---------CCCCEEEEECCCcCCC
Confidence 344555666665432 47899999999999999998764321 00 0112356667777766
Q ss_pred HHHHHHhCCCceEE---EecCCCCc----ccHHHHHHHHHHhhhcCCCceEEEEeeccCCccc----cccHHHHHHHHHh
Q psy13453 644 VEKSAIIGDVPVRQ---LRSDDNGV----LRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCA----FDNLEELGPICQE 712 (764)
Q Consensus 644 v~kAa~~lGl~v~~---Vp~d~~g~----md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Ga----iDpl~eIa~i~~~ 712 (764)
..-+....+..... .|..++.. .|+++|++.|+++ +.+|+..--....|. -+.+++|+++|++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~avivep~~~~~G~~~~~~~~l~~l~~l~~~ 207 (389)
T PRK01278 134 TLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPN------TAAILIEPIQGEGGIRPAPDEFLKGLRQLCDE 207 (389)
T ss_pred cHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHH
Confidence 55554444432111 12112222 5899999988642 335555543444452 3699999999999
Q ss_pred cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCcee
Q psy13453 713 YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSA 762 (764)
Q Consensus 713 ~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~ 762 (764)
||+||++|.+|.|......-+.....|+ ..|-+ .+.|.++.-+..|.
T Consensus 208 ~g~~lI~DEv~~g~g~~g~~~~~~~~~~-~pdi~--t~sK~l~~G~~ig~ 254 (389)
T PRK01278 208 NGLLLIFDEVQCGMGRTGKLFAHEWAGV-TPDIM--AVAKGIGGGFPLGA 254 (389)
T ss_pred cCCEEEEeccccCCCcCCcceeecccCC-CCCEE--EEehhccCCcceEE
Confidence 9999999999987422111011111244 24644 45687763333443
No 298
>PRK06434 cystathionine gamma-lyase; Validated
Probab=98.33 E-value=6.9e-06 Score=92.15 Aligned_cols=154 Identities=16% Similarity=0.102 Sum_probs=104.0
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEE
Q psy13453 555 LSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVA 634 (764)
Q Consensus 555 ~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi 634 (764)
...|...++|+. ++++.|.+ ..+.+++|+.|+..++.+. .. +...|
T Consensus 61 ~~~P~~~~lE~~----la~leg~~-----------~av~~sSG~aAi~~al~al----l~---------------~GD~V 106 (384)
T PRK06434 61 WGNPTVQAFEEK----YAVLENAE-----------HALSFSSGMGAITSAILSL----IK---------------KGKRI 106 (384)
T ss_pred CCChhHHHHHHH----HHHHhCCC-----------cEEEeCCHHHHHHHHHHHH----hC---------------CCCEE
Confidence 467888888885 67776653 3578888998887777642 11 11235
Q ss_pred EecCC----cchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHH
Q psy13453 635 YTSDQ----SNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPIC 710 (764)
Q Consensus 635 ~~S~~----aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~ 710 (764)
+++.. ++..+...+...|+.++.+++++...++ ++.+ .+-+|....-++.++.+-||++|+++|
T Consensus 107 l~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~~~-------l~~~-----~tklv~~e~~snpt~~v~Di~~I~~la 174 (384)
T PRK06434 107 LSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNSLD-------FDPS-----NYDLIYAESITNPTLKVPDIKNVSSFC 174 (384)
T ss_pred EEecCccchHHHHHHHHHHhcCcEEEEECCCChhhee-------ecCC-----CeeEEEEEcCCCCCceeecHHHHHHHH
Confidence 55544 2222335567789999999887433332 1111 233777778888899999999999999
Q ss_pred HhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC--ceee
Q psy13453 711 QEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD--CSAM 763 (764)
Q Consensus 711 ~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~--~g~l 763 (764)
++++ +.||++|+.....-| . + ..||.++.|+||+++.+-+ -|++
T Consensus 175 ~~~~--lvVD~t~~s~~~~~p-l-----~-~gaDivv~S~tK~i~G~~d~~gG~v 220 (384)
T PRK06434 175 HEND--VIVDATFASPYNQNP-L-----D-LGADVVIHSATKYISGHSDVVMGVA 220 (384)
T ss_pred HHcC--eEEECCCCCcccCCc-h-----h-cCCCEEEeecccccCCCCCceEEEE
Confidence 9999 467999976533222 1 1 1479999999999998765 4543
No 299
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=98.33 E-value=1.7e-05 Score=89.29 Aligned_cols=164 Identities=15% Similarity=0.109 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
...++.+.|+++++.+ ...|+++||+||..|+++||.....+.+ ..++.+|.....-|-
T Consensus 78 ~~~~la~~L~~~~~~~-----------~~~f~~SGseA~e~Alk~ar~~~~~~~~----------~~r~~ii~~~~~yHG 136 (397)
T TIGR03246 78 PVLRLAKKLVDATFAD-----------KVFFCNSGAEANEAALKLARRYALDKHG----------ADKSEIVAFKNSFHG 136 (397)
T ss_pred HHHHHHHHHHhhCCCC-----------EEEEeCCcHHHHHHHHHHHHHHHHhcCC----------CCCCEEEEECCCcCC
Confidence 3344555666666543 3589999999999999999876432100 012335666667787
Q ss_pred hHHHHHHhCCC------------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc----ccHHHH
Q psy13453 643 SVEKSAIIGDV------------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF----DNLEEL 706 (764)
Q Consensus 643 Sv~kAa~~lGl------------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai----Dpl~eI 706 (764)
+..-+..+.|. ++..+|-+ |+++|++.|.+. +.+|+..--....|.+ +.+++|
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~------~aavi~Epi~~~~G~~~~~~~~l~~l 205 (397)
T TIGR03246 137 RTLFTVSVGGQPKYSQGFAPLPGGIKHAPYN-----DLAAAKALISDK------TCAVIVEPIQGEGGVVPADPAFLKGL 205 (397)
T ss_pred ccHHHHHhcCCcccccCCCCCCCceEEeCCC-----CHHHHHHHhccC------eEEEEEecccCCCCCcCCCHHHHHHH
Confidence 76555554432 22333322 689999988532 3456555444445533 579999
Q ss_pred HHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCce
Q psy13453 707 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCS 761 (764)
Q Consensus 707 a~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g 761 (764)
+++|++||++|++|-++.|.-....-+.....|+ ..|.+++ -|.++.-+..|
T Consensus 206 ~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv-~pDi~t~--~K~lggG~pig 257 (397)
T TIGR03246 206 RELCDRHNALLIFDEVQTGVGRTGELYAYMHYGV-TPDILTS--AKALGGGFPIG 257 (397)
T ss_pred HHHHHHcCCEEEEechhhcCCccccchhhhhcCC-CCCEEEe--ehhhhCCccee
Confidence 9999999999999999865421111111112245 4687754 67664323344
No 300
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=98.33 E-value=4.8e-06 Score=93.18 Aligned_cols=156 Identities=13% Similarity=0.003 Sum_probs=108.1
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
++.+++++.+|.+++ ..++|+|+++++..++.+. .. ++..|++++-+.....
T Consensus 90 ~lr~~ia~~~~~~~~---------~I~~t~Ga~~~i~~~~~~~----~~---------------~gd~Vlv~~P~y~~y~ 141 (380)
T PLN03026 90 RLRAALAEDSGLESE---------NILVGCGADELIDLLMRCV----LD---------------PGDKIIDCPPTFGMYV 141 (380)
T ss_pred HHHHHHHHHhCcChh---------hEEEcCCHHHHHHHHHHHh----cC---------------CCCEEEEcCCChHHHH
Confidence 466778888887653 5789999999876655432 11 1123555555665666
Q ss_pred HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccc
Q psy13453 646 KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAG 725 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg 725 (764)
..++..|++++.+|.++++.+|+++|++++... .+-+|+.+..++.||.+-+.+++.++++.. +|+++|.||.-
T Consensus 142 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~-----~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~ 215 (380)
T PLN03026 142 FDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETH-----KPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIE 215 (380)
T ss_pred HHHHHcCCEEEEeecCCCCCcCHHHHHHHHhcc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchh
Confidence 677889999999999888899999999988421 134777778999999999999999999865 99999999975
Q ss_pred cccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 726 SALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 726 ~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+.. .......+..- .-.-+.-++.|.++.|
T Consensus 216 ~~~-~~~~~~~~~~~-~~viv~~SfSK~~gla 245 (380)
T PLN03026 216 FST-QESRMKWVKKY-DNLIVLRTFSKRAGLA 245 (380)
T ss_pred hcC-CcchHHHHHhC-CCEEEEecchHhhcCc
Confidence 321 11111111111 1124567888988743
No 301
>PRK06855 aminotransferase; Validated
Probab=98.33 E-value=1.7e-05 Score=90.31 Aligned_cols=172 Identities=16% Similarity=0.053 Sum_probs=106.0
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCce
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKL 632 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~ 632 (764)
.|.......++=+.+.+|+.+..|++-+ ....++|+|++++...++. . ... ++
T Consensus 68 ~Y~~~~G~~~LReaia~~~~~~~g~~~~-------~~~I~it~G~~~al~~~~~-l----~~~--------------Gd- 120 (433)
T PRK06855 68 GYCPTKGVLETREFLAELNNKRGGAQIT-------PDDIIFFNGLGDAIAKIYG-L----LRR--------------EA- 120 (433)
T ss_pred CCCCCCCCHHHHHHHHHHHHhccCCCCC-------HhHEEEcCcHHHHHHHHHH-h----cCC--------------CC-
Confidence 3444445556667777888887676432 2367899999998765542 1 110 12
Q ss_pred EEEecCCcchhHHHH-HHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc---cHHHH
Q psy13453 633 VAYTSDQSNSSVEKS-AIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD---NLEEL 706 (764)
Q Consensus 633 vi~~S~~aH~Sv~kA-a~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD---pl~eI 706 (764)
.|++.+-+......+ ....|++++.+|+++ ++.+|+++|+++++... .+.+++.+..++.||.+= .+++|
T Consensus 121 ~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~----~~~~i~l~~P~NPTG~~~s~~~~~~l 196 (433)
T PRK06855 121 RVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNP----SIAGILLINPDNPTGAVYPKEILREI 196 (433)
T ss_pred eEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCC----CceEEEEECCCCCCCcCCCHHHHHHH
Confidence 244444444333333 234588888889873 35799999999986321 133555567889999885 56667
Q ss_pred HHHHHhcCCEEEEecccccccccc---chhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 707 GPICQEYNIWLHVDAAYAGSALLL---PEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 707 a~i~~~~glwLHVDaA~Gg~~l~~---~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+++|++||+|+..|-+|+....-. +........- + --..-++.|.++.|
T Consensus 197 ~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~-~-~I~~~S~SK~~~~p 248 (433)
T PRK06855 197 VDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDV-P-GIALKGISKELPWP 248 (433)
T ss_pred HHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcC-C-eEEEecCccccCCC
Confidence 788999999999999998753211 1111111110 1 13456788988644
No 302
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=98.33 E-value=1.1e-05 Score=90.29 Aligned_cols=172 Identities=15% Similarity=0.074 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
.....++.++++++.|.+ ..+||+||++||..|+.++|...... + ...+-++.....-
T Consensus 80 ~~~~~~la~~l~~~~~~~-----------~v~~~~gg~eA~~~al~~a~~~~~~~-~----------~~~~~ii~~~~~y 137 (396)
T PRK02627 80 IEPQEELAEKLVELSGMD-----------KVFFCNSGAEANEAAIKLARKYGHKK-G----------IEKPEIITAENSF 137 (396)
T ss_pred CHHHHHHHHHHHhhcCCC-----------EEEECCCcHHHHHHHHHHHHHHhccc-C----------CCCCeEEEECCCc
Confidence 456666778888887653 36899999999999999988653211 0 0112345556666
Q ss_pred chhHHHHHHhCCCceE---EEecCCCC----cccHHHHHHHHHHhhhcCCCceEEEEeeccCCccc----cccHHHHHHH
Q psy13453 641 NSSVEKSAIIGDVPVR---QLRSDDNG----VLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCA----FDNLEELGPI 709 (764)
Q Consensus 641 H~Sv~kAa~~lGl~v~---~Vp~d~~g----~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Ga----iDpl~eIa~i 709 (764)
|-...-+....+.... ..|...+. .-|+++|++++.+. +-+|+.....+.+|. -+.+++|+++
T Consensus 138 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~vii~p~~~~~G~~~~~~~~l~~l~~l 211 (396)
T PRK02627 138 HGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDK------TAAVMLEPIQGEGGVNPADKEYLQALREL 211 (396)
T ss_pred CcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCCC------eEEEEEecccCCCCCccCCHHHHHHHHHH
Confidence 7554444444332211 11222111 11899999988432 335555544444552 2469999999
Q ss_pred HHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 710 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 710 ~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
|++||++|++|.+|.+.......+.....|+ ..|-++ +-|.++..+..|.+
T Consensus 212 ~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~-~pdi~t--~sK~~~~G~rig~~ 262 (396)
T PRK02627 212 CDENGILLILDEVQTGMGRTGKLFAYQHYGI-EPDIMT--LAKGLGGGVPIGAV 262 (396)
T ss_pred HHHcCCEEEEechhcCCCccCceeeehhcCC-CCCEEE--EcchhhCCcccEEE
Confidence 9999999999999987422111011111233 346555 45888754455554
No 303
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=98.31 E-value=1.6e-05 Score=88.49 Aligned_cols=161 Identities=14% Similarity=0.121 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
..++.++.+++++..+.+ ..+|+++|++||..|+.+||... . ++-++......
T Consensus 70 ~~~~~~la~~l~~~~~~~-----------~~~~~~sG~~a~~~A~~~a~~~~--g--------------~~~vi~~~~~~ 122 (377)
T PRK02936 70 NSLQEEVASLLAENSAGD-----------LVFFCNSGAEANEAALKLARKHT--G--------------KSKIVTFEQSF 122 (377)
T ss_pred CHHHHHHHHHHHhcCCCC-----------EEEEeCCcHHHHHHHHHHHHHhc--C--------------CCeEEEECCCc
Confidence 567777778888776542 36899999999999999887541 0 12256666677
Q ss_pred chhHHHHHHhCCC------------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc----ccHH
Q psy13453 641 NSSVEKSAIIGDV------------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF----DNLE 704 (764)
Q Consensus 641 H~Sv~kAa~~lGl------------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai----Dpl~ 704 (764)
|-+..-+....|. .+..+|.+ |+++|++.+.+. +.+|+........|.+ +.++
T Consensus 123 Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~~~------~~~ii~e~i~~~~G~~~~~~~~l~ 191 (377)
T PRK02936 123 HGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFN-----DIKALKEVMNEE------VAAVMLEVVQGEGGVIPADPAFLQ 191 (377)
T ss_pred CCCcHHhhhccCCccccccCCCCCCCceEeCCC-----CHHHHHHhccCC------eEEEEEecccCCCCCccCCHHHHH
Confidence 8666555554432 11222221 688999888543 2355554444444544 4599
Q ss_pred HHHHHHHhcCCEEEEeccccccccccch-hhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 705 ELGPICQEYNIWLHVDAAYAGSALLLPE-YAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 705 eIa~i~~~~glwLHVDaA~Gg~~l~~~~-~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+|+++|++||+++++|-+|.+... ..+ +.....++ ..|-+ .+.|.++.-+..|++
T Consensus 192 ~l~~l~~~~~~~lI~DEv~~g~g~-~g~~~~~~~~~~-~~di~--t~sK~l~~G~~ig~v 247 (377)
T PRK02936 192 EVQTLCKKFGALLIIDEVQTGIGR-TGTLFAYEQFGL-DPDIV--TVAKGLGNGIPVGAM 247 (377)
T ss_pred HHHHHHHHcCCEEEEeccccCCCc-CchhhHHHhhCC-CCcEE--EEcccccCCCccEEE
Confidence 999999999999999999976322 111 11111244 34644 468988743345543
No 304
>KOG2040|consensus
Probab=98.29 E-value=7.7e-06 Score=93.09 Aligned_cols=174 Identities=16% Similarity=0.143 Sum_probs=131.1
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEe-CChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQ-STASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVA 634 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfT-sGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi 634 (764)
.+....+|-.++-.||+++-|++.- .|. .+|..+-..++.+-|.....+ ++ -.+-+.
T Consensus 576 QaqGY~~lf~~Le~~Lc~iTG~D~~-----------s~QPNsGA~GEYaGL~~IRaY~~~k-ge----------~hRnvC 633 (1001)
T KOG2040|consen 576 QAQGYQQLFTELEKDLCEITGFDSF-----------SLQPNSGAQGEYAGLRVIRAYLESK-GE----------GHRNVC 633 (1001)
T ss_pred HHhhHHHHHHHHHHHhheeecccce-----------eecCCCCcccchhhHHHHHHHHHhc-cC----------CcceeE
Confidence 3445667888888899999999751 243 244455566777666654332 11 124467
Q ss_pred EecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc-cHHHHHHHHHhc
Q psy13453 635 YTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD-NLEELGPICQEY 713 (764)
Q Consensus 635 ~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD-pl~eIa~i~~~~ 713 (764)
+++-.+|-....+|.+.|++|+.|.+|.+|.||..+|+++-++... .-.++.+|..+|. |.|. .|.++.++.++|
T Consensus 634 lIPvSAHGTNPASA~MagmkvvpV~~~~~G~id~~dLk~kaekh~~---~Laa~MvTYPST~-GvfE~~i~d~cd~iHeh 709 (1001)
T KOG2040|consen 634 LIPVSAHGTNPASAAMAGMKVVPVGCDANGNIDMVDLKAKAEKHKD---NLAALMVTYPSTH-GVFEEGIDDICDIIHEH 709 (1001)
T ss_pred EEeecccCCChhhHHhcCCEEEEeeccCCCCccHHHHHHHHHHhhh---hhheeEEeccccc-ccccccHHHHHHHHHhc
Confidence 8899999999999999999999999999999999999999877644 2457888999984 8885 799999999999
Q ss_pred CCEEEEeccccc-cccccchhhhhhcCCCcccEEEEcCCccCCCCcCce
Q psy13453 714 NIWLHVDAAYAG-SALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCS 761 (764)
Q Consensus 714 glwLHVDaA~Gg-~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g 761 (764)
|--+..|||-=- -.-+|. .|-=.+|---++.||.+..|.|-|
T Consensus 710 GGQVYlDGANMNAqVGlc~------pGd~GaDV~HLNLHKTFcIPHGGG 752 (1001)
T KOG2040|consen 710 GGQVYLDGANMNAQVGLCR------PGDIGADVCHLNLHKTFCIPHGGG 752 (1001)
T ss_pred CCEEEecCCCccceecccC------CccccccceeecccceeeecCCCC
Confidence 999999998322 111232 132367999999999999998866
No 305
>PLN02409 serine--glyoxylate aminotransaminase
Probab=98.25 E-value=4.9e-05 Score=85.77 Aligned_cols=226 Identities=11% Similarity=0.019 Sum_probs=139.8
Q ss_pred eeeeH--HHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-------
Q psy13453 20 LIYES--FKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS------- 90 (764)
Q Consensus 20 ~~YSv--~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~------- 90 (764)
.|+|. ...++.+|+.. +.||.+.+...|+++++++|++++. .++-+++-+-..|++|.+-|++++++
T Consensus 93 ~~~~~~~~~~~~~~g~~v---~~v~~~~~~~~~~~~l~~~l~~~~~-~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~ 168 (401)
T PLN02409 93 GQFSLLWIDQMQRLNFDV---DVVESPWGQGADLDILKSKLRQDTN-HKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQH 168 (401)
T ss_pred CchhHHHHHHHHHcCCce---EEEECCCCCCCCHHHHHHHHhhCcC-CCccEEEEEeecccccccCCHHHHHHHHhhhcc
Confidence 34444 57788889877 9999987667999999999986321 12224456777899999999987664
Q ss_pred CCCceecccc--------------------ccc-----c-ceeeeecCCCccccccc--cccccCCc------ccCCCC-
Q psy13453 91 NGPLKVGGVL--------------------RRV-----Y-SSCLVPRGQKSLRTTVL--FHFLFQHW------QIPLGR- 135 (764)
Q Consensus 91 ~~wlHVDa~l--------------------~~~-----y-~s~ll~rd~~~l~~~~s--~~~d~~d~------tle~SR- 135 (764)
++++.||+.. .++ . .++++.+++ .+..... ....+.+| .-.+++
T Consensus 169 g~~~vvD~v~s~g~~~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 247 (401)
T PLN02409 169 PALLLVDGVSSIGALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPK-ALEASKTAKSPRVFFDWADYLKFYKLGTYW 247 (401)
T ss_pred CcEEEEEcccccCCccccccccCccEEEEcCccccCcCCCcceeEECHH-HHHHHhcCCCCCeecCHHHHHHHHhcCCCC
Confidence 6788999942 111 1 123333321 1111000 00011111 011111
Q ss_pred cc-c----HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC-C--c-eeEEEEeecccccccccccc
Q psy13453 136 RF-R----ALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP-S--M-GLVCFRLKVRFWDKLDNLFG 206 (764)
Q Consensus 136 r~-~----ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P-~--l-~iV~Fry~P~~~~~~~~~~~ 206 (764)
.+ - .+.+-.++..+-.+|+.++.++.-++++++.+.|++. +++++.+. . . .+++|++. ++
T Consensus 248 ~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~~~~~p-~~--------- 316 (401)
T PLN02409 248 PYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDTVTAVVVP-EG--------- 316 (401)
T ss_pred CCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccceEEEeCC-CC---------
Confidence 11 1 2355667777778899999999999999999999986 89998752 2 3 45667652 21
Q ss_pred CccCCccHHHHHHHHHHHhcCcEEEEeceeC-CeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 207 TISFGDNDLNKAVYDRIIARKVIYIVKGSFQ-DRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 207 ~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~-g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
.+ ..++.++|.++-.+.+...... ....+|+..+. .++++++..+++.+.++..+
T Consensus 317 -----~~--~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g-~~~~~~~~~~~~~~~~~l~~ 372 (401)
T PLN02409 317 -----ID--SAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLG-NVNELQLLGALAGVEMVLKD 372 (401)
T ss_pred -----CC--HHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCC-CCCHHHHHHHHHHHHHHHHH
Confidence 11 1356666655433444433333 34689997666 56899999999999886544
No 306
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=98.24 E-value=5.5e-05 Score=84.98 Aligned_cols=175 Identities=17% Similarity=0.051 Sum_probs=111.5
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCc--EEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 554 WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGG--GIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~--GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
|.......++=+.+.+|+.+.-+..-+ ... .++|+|++++...++.+.... . +.
T Consensus 65 Y~~~~G~~~lR~aia~~~~~~~~~~~~-------~~~i~v~iT~Ga~~al~~~~~~l~~~--~---------------pG 120 (396)
T PRK09257 65 YLPIEGLAAYRQAVQELLFGADSPALA-------AGRVATVQTPGGTGALRVGADFLKRA--F---------------PD 120 (396)
T ss_pred cCCCCCCHHHHHHHHHHhcCCCCcccc-------cCeEEEEecCCccHHHHHHHHHHHHh--C---------------CC
Confidence 444444445555566666443221100 122 489999999987776432100 0 12
Q ss_pred eEEEecCCcchhHHHHHHhCCCceEEEec-C-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHH
Q psy13453 632 LVAYTSDQSNSSVEKSAIIGDVPVRQLRS-D-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEEL 706 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~-d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eI 706 (764)
..|++.+-+......+++..|++++.+|. + +++.+|+++|++++++.. ....+++....++.||.+ +.+++|
T Consensus 121 d~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~---~~~~~~i~~~p~NPTG~~~s~~~~~~l 197 (396)
T PRK09257 121 AKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAP---AGDVVLLHGCCHNPTGADLTPEQWDEL 197 (396)
T ss_pred CeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHH
Confidence 25677777777788889999999999997 3 357899999999887521 123566667788889988 567788
Q ss_pred HHHHHhcCCEEEEeccccccccccc-hhhh--hhcCC-CcccEEEEcCCccCCC
Q psy13453 707 GPICQEYNIWLHVDAAYAGSALLLP-EYAH--LKRGL-EYVDSFDFNTHKWLLV 756 (764)
Q Consensus 707 a~i~~~~glwLHVDaA~Gg~~l~~~-~~r~--~l~gi-e~aDSit~d~HK~l~~ 756 (764)
+++|++|++|+..|-+|.....-.. .... .+.+. +++ -+.-++.|.++.
T Consensus 198 ~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~v-i~i~SfSK~~~~ 250 (396)
T PRK09257 198 AELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLEL-LVASSFSKNFGL 250 (396)
T ss_pred HHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcE-EEEEEcCCcCcc
Confidence 8999999999999999987432101 1111 11111 121 345789998875
No 307
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=98.22 E-value=5.7e-05 Score=87.74 Aligned_cols=191 Identities=12% Similarity=0.063 Sum_probs=115.2
Q ss_pred HHHHHHHHHhhcccCccccC-CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhh
Q psy13453 537 SIVGDMLSGAFGLIGFSWLS-SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINH 615 (764)
Q Consensus 537 ~~lad~l~~~lN~n~~~~~~-sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~ 615 (764)
..+-++....++. .|.. .......|..+.+++.+.++..... .++...++|.|++++..+++.+.....+-.
T Consensus 110 ~~~~~~~~~~~~~---~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~----~~~~~V~it~Gat~al~~~~~~l~~~~ll~ 182 (521)
T TIGR03801 110 AFLYEMCDGIIGD---NYPVPDRMLPHSEKIVHQYLIQEMCGNKPP----PGEFDLFAVEGGTAAMCYIFDSLKANELLK 182 (521)
T ss_pred HHHHHHHHHhhcC---CCCCCCCCHHHHHHHHHHHHHhhccCCCCC----CCcCeEEEeCCHHHHHHHHHHHHhHhhcCC
Confidence 4455555554443 3533 3344556666667777765432110 011157899999999887766422211111
Q ss_pred hccCCCCCccccccCceEEEecCCcchhHHHHHHhC--CCceEEEecCC--C-----CcccHHHHHHHHHHhhhcCCCce
Q psy13453 616 WQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIG--DVPVRQLRSDD--N-----GVLRGDALLTAVKEDLAKGLIPC 686 (764)
Q Consensus 616 ~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~l--Gl~v~~Vp~d~--~-----g~md~~~Le~~I~~~~~~G~~p~ 686 (764)
+...|++..-........+.+. |+.++.|++++ + +.+|+++|++++.+. +-
T Consensus 183 --------------pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~------~k 242 (521)
T TIGR03801 183 --------------KGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPS------IK 242 (521)
T ss_pred --------------CCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCC------Cc
Confidence 1224555656666666666665 56677777753 2 789999999876543 33
Q ss_pred EEEEeeccCCcccccc---HHHHHHHHHhc--CCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 687 CLIATLGTTGTCAFDN---LEELGPICQEY--NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 687 ~VvataGTT~~GaiDp---l~eIa~i~~~~--glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+|+++..++.||.+-+ +++|+++|++| ++|+.+|-+|+-..- .+...+.-...---+.-++.|.++.|
T Consensus 243 ai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~sl~~~~~~~vI~v~SfSK~fg~~ 315 (521)
T TIGR03801 243 ALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRSLFAELPYNTIGVYSFSKYFGAT 315 (521)
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccchhhhCCCCEEEEEcchhhccCc
Confidence 6667788999999955 77788889987 899999999986431 22221111111113455788887654
No 308
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=98.20 E-value=2.9e-05 Score=89.03 Aligned_cols=204 Identities=14% Similarity=0.084 Sum_probs=126.6
Q ss_pred EEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceecccc-------------
Q psy13453 39 RLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGGVL------------- 100 (764)
Q Consensus 39 ~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa~l------------- 100 (764)
..++++++|.+|+++|++++++.+ .-+++. +...+|.+-|+.++++ ++++|||+..
T Consensus 159 ~~~~~~~~g~id~~~L~~~l~~~~----~~lvi~--~~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~ 232 (452)
T PTZ00094 159 LPYQVNEKGLIDYDKLEELAKAFR----PKLIIA--GASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSP 232 (452)
T ss_pred eecccCCCCCcCHHHHHHHHHHhC----CCEEEE--eCCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCC
Confidence 456678789999999999997531 113332 2346899999999886 8899999953
Q ss_pred ----------ccc-----cceeeeecCCCccccccccccc-cCCcccCCCC-cccHHHHHHHHHHccHHHHHHHHHHHHH
Q psy13453 101 ----------RRV-----YSSCLVPRGQKSLRTTVLFHFL-FQHWQIPLGR-RFRALKLWMTLRSYGLKGLQAYLRKHIS 163 (764)
Q Consensus 101 ----------~~~-----y~s~ll~rd~~~l~~~~s~~~d-~~d~tle~SR-r~~ALklWatL~~lG~eGy~~~i~~~i~ 163 (764)
.|+ .++++++++.. ... +....+ ....+++++= -.....+-++++.+-..++.++.++..+
T Consensus 233 ~~~~D~l~~S~hK~l~GP~Gg~l~~~~~~-~~~-l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~ 310 (452)
T PTZ00094 233 FPYADVVTTTTHKSLRGPRSGLIFYRKKV-KPD-IENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLK 310 (452)
T ss_pred CCCCcEEEcCCccCCCCCCceEEEEeccc-chH-HHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHH
Confidence 111 12344443321 100 000000 0111234443 3344567788888877788888899999
Q ss_pred HHHHHHHHHhcCCCeEEeCCC---CceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeC---
Q psy13453 164 LAKKFADLVEQDDRFELVCPP---SMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQ--- 237 (764)
Q Consensus 164 lA~~l~~~I~~~p~~ell~~P---~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~--- 237 (764)
++++|++.|++. +++++.+. ...+|.|... +.+ ...+...|.+.|.. ++...+.
T Consensus 311 l~~~l~~~L~~~-g~~v~~~~~~~~~~~v~~~~~----------------~~~--~~~~~~~L~~~gI~-vs~~~~p~~~ 370 (452)
T PTZ00094 311 NAKALAAALEKR-GYDLVTGGTDNHLVLVDLRPF----------------GIT--GSKMEKLLDAVNIS-VNKNTIPGDK 370 (452)
T ss_pred HHHHHHHHHHhC-CcEEecCCCCCceEeecCCcC----------------CCC--HHHHHHHHHHCCcE-EecccCCCCC
Confidence 999999999885 89988532 2345555321 111 14667777666764 3333222
Q ss_pred ---CeeEEEEeccCCCC---CHHHHHHHHHHHHHHHHHH
Q psy13453 238 ---DRLFMRFAICSSQT---EESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 238 ---g~~~LRi~v~np~T---t~e~i~~~l~~l~~~~~~i 270 (764)
....+|+.+....| ++++++.+++.|.++....
T Consensus 371 ~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~ 409 (452)
T PTZ00094 371 SALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLA 409 (452)
T ss_pred cCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 23689996543333 5999999999998887653
No 309
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=98.19 E-value=1.7e-05 Score=88.51 Aligned_cols=155 Identities=16% Similarity=0.070 Sum_probs=103.0
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
++.+.+++.+|.+++ ..++|+|+++++..++.+.. . +...|++.+-+.....
T Consensus 68 ~Lr~aia~~~~~~~~---------~I~vt~Gs~e~i~~~~~~l~----~---------------~gd~vlv~~P~y~~~~ 119 (366)
T PRK01533 68 TLRQTIANKLHVKME---------QVLCGSGLDEVIQIISRAVL----K---------------AGDNIVTAGATFPQYR 119 (366)
T ss_pred HHHHHHHHHhCCCcc---------eEEECCCHHHHHHHHHHHhc----C---------------CCCEEEEcCCcHHHHH
Confidence 355666777787663 67899999998776655431 1 1224677777788888
Q ss_pred HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHH---HhcCCEEEEecc
Q psy13453 646 KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPIC---QEYNIWLHVDAA 722 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~---~~~glwLHVDaA 722 (764)
.++...|++++.||.+ ++.+|+++|++++.+. +-+|+.+..++.||.+-+.+++.+++ ++++ ++++|-+
T Consensus 120 ~~~~~~g~~v~~v~~~-~~~~d~~~l~~~~~~~------~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~ 191 (366)
T PRK01533 120 HHAIIEGCEVKEVALN-NGVYDLDEISSVVDND------TKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEA 191 (366)
T ss_pred HHHHHcCCEEEEeecC-CCCcCHHHHHHHhCcC------CcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEcc
Confidence 8899999999999996 5679999999988543 23666778999999997766665554 4555 6778999
Q ss_pred ccccccccchhhhhhcCCCcc--cEEEEcCCccCCCC
Q psy13453 723 YAGSALLLPEYAHLKRGLEYV--DSFDFNTHKWLLVN 757 (764)
Q Consensus 723 ~Gg~~l~~~~~r~~l~gie~a--DSit~d~HK~l~~P 757 (764)
|..+.. .......+..+... --+.-++-|.++.|
T Consensus 192 y~~~~~-~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~ 227 (366)
T PRK01533 192 YYEYVT-AKDFPETLPLLEKHKNILVLRTFSKAYGLA 227 (366)
T ss_pred HHHhhc-cccCcchhHHhccCCCEEEEeCchHHhcCh
Confidence 974321 11111111111111 24556888887744
No 310
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=98.18 E-value=6.1e-05 Score=84.36 Aligned_cols=214 Identities=12% Similarity=-0.004 Sum_probs=133.7
Q ss_pred HHhhcCC-CCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc---CCCceeccc---
Q psy13453 27 ATHSLSG-TPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS---NGPLKVGGV--- 99 (764)
Q Consensus 27 Aa~~LGl-~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~---~~wlHVDa~--- 99 (764)
+++.+|+ .. +.++++.....|+++++. +..+.-|.-+|.+|.+-||++|++ ++++.|||.
T Consensus 109 ~~~~~g~~~v---~~~~~~~g~~~d~~~i~~----------~~~V~~~h~~t~tG~~~pi~~I~~~~~g~~~vVDa~qs~ 175 (378)
T PRK03080 109 VVKQLKLEDP---RVLEADYGSLPDLSAVDF----------DRDVVFTWNGTTTGVRVPVARWIGADREGLTICDATSAA 175 (378)
T ss_pred HHhhcCCCCc---eEeccCCCCCCCHhhcCC----------CCCEEEEecCCccceeccchhhccccCCCeEEEeccccc
Confidence 3456787 55 888888777888776332 123456888999999999999987 678899993
Q ss_pred --------------------cccccc-eeeeecCCCccccc--ccc---ccccCCcc---------cCCCC-c-ccHH--
Q psy13453 100 --------------------LRRVYS-SCLVPRGQKSLRTT--VLF---HFLFQHWQ---------IPLGR-R-FRAL-- 140 (764)
Q Consensus 100 --------------------l~~~y~-s~ll~rd~~~l~~~--~s~---~~d~~d~t---------le~SR-r-~~AL-- 140 (764)
+..+.+ +++.++.+ .+... ... ...|.++. .+++. . ....
T Consensus 176 G~~pidv~~iD~~~~s~~K~l~~P~G~g~l~v~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i 254 (378)
T PRK03080 176 FALPLDWSKLDVYTFSWQKVLGGEGGHGMAILSPR-AVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTV 254 (378)
T ss_pred ccCCCCHHHCcEEEEehhhhCCCCCceEEEEECHH-HHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHH
Confidence 122232 34444432 21110 000 00111111 12211 1 1122
Q ss_pred -HHHHHHHHccHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC-CC---ceeEEEEeeccccccccccccCccCCccH
Q psy13453 141 -KLWMTLRSYGLK-GLQAYLRKHISLAKKFADLVEQDDRFELVCP-PS---MGLVCFRLKVRFWDKLDNLFGTISFGDND 214 (764)
Q Consensus 141 -klWatL~~lG~e-Gy~~~i~~~i~lA~~l~~~I~~~p~~ell~~-P~---l~iV~Fry~P~~~~~~~~~~~~~~~~~d~ 214 (764)
.+-++|+++=.+ |+.++.++..++++++.+.+++.++++++.. |. ..+++|++.. ....
T Consensus 255 ~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~---------------~~~~ 319 (378)
T PRK03080 255 EDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVD---------------AQAA 319 (378)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCC---------------chHH
Confidence 335688888777 8999999999999999999999988888752 32 2588897531 0001
Q ss_pred HHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 215 LNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 215 ~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
.+.++..+|.++|..............+|++ .+..+++++++.+++.|+++.+++
T Consensus 320 ~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis-~~~~~t~~di~~l~~al~~~~~~~ 374 (378)
T PRK03080 320 VDAAAVAKLLRENGAVDIEPYRDAPNGLRIW-CGPTVEPADVEALTPWLDWAFERL 374 (378)
T ss_pred HHHHHHHHHHHcCCeeccccccCCCCcEEEe-cCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3345666676666543322111123579998 667888999999999999876654
No 311
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=98.18 E-value=3.7e-05 Score=84.28 Aligned_cols=216 Identities=12% Similarity=0.113 Sum_probs=129.5
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC-CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD-SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~-~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
.|.+...++...|+.. +.+++++ ++.+|+++|+++|+++ +-+++.+ .++|.+.|++++.+ +++
T Consensus 67 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~~d~~~l~~~i~~~-----~~~v~~~---~~~G~~~~~~~i~~l~~~~~i~ 135 (352)
T cd00616 67 TFVATANAILLLGATP---VFVDIDPDTYNIDPELIEAAITPR-----TKAIIPV---HLYGNPADMDAIMAIAKRHGLP 135 (352)
T ss_pred chHHHHHHHHHcCCeE---EEEecCCCcCCcCHHHHHHhcCcC-----CeEEEEE---CCCCCcCCHHHHHHHHHHcCCe
Confidence 5778888999999877 9999987 8999999999988542 2233332 35798999998775 889
Q ss_pred ceecccccc--cc--------c------------------eeeeecCCCccccc--ccc-c--cc---cCCcccCCCCcc
Q psy13453 94 LKVGGVLRR--VY--------S------------------SCLVPRGQKSLRTT--VLF-H--FL---FQHWQIPLGRRF 137 (764)
Q Consensus 94 lHVDa~l~~--~y--------~------------------s~ll~rd~~~l~~~--~s~-~--~d---~~d~tle~SRr~ 137 (764)
+++|++... .+ + ++++.++++..... +.. . .+ +...++..+-+.
T Consensus 136 li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~K~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (352)
T cd00616 136 VIEDAAQALGATYKGRKVGTFGDAGAFSFHPTKNLTTGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRL 215 (352)
T ss_pred EEEECCCCCCCeECCEEcccCcceeEEcCCCCCCCcccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCc
Confidence 999996421 11 0 11111111100000 000 0 00 000011111123
Q ss_pred cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC-----ceeEEEEeeccccccccccccCccCCc
Q psy13453 138 RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS-----MGLVCFRLKVRFWDKLDNLFGTISFGD 212 (764)
Q Consensus 138 ~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~-----l~iV~Fry~P~~~~~~~~~~~~~~~~~ 212 (764)
..+..++.+ ...+++.++.++..++++++.+.|++.++++++.++. ..+++|++.+.. ..
T Consensus 216 ~~~~aa~~~--~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 280 (352)
T cd00616 216 SEIQAAIGL--AQLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEA-------------GE 280 (352)
T ss_pred CHHHHHHHH--HHHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcC-------------CC
Confidence 333333333 2456778888999999999999999999999887543 356777653100 00
Q ss_pred cHHHHHHHHHHHhcCcEEEE-e-ceeC--------------C-------eeEEEEeccCCCCCHHHHHHHHHHHH
Q psy13453 213 NDLNKAVYDRIIARKVIYIV-K-GSFQ--------------D-------RLFMRFAICSSQTEESDVQLGWNEIR 264 (764)
Q Consensus 213 d~~n~~L~~~L~~~G~~~vs-~-t~l~--------------g-------~~~LRi~v~np~Tt~e~i~~~l~~l~ 264 (764)
-...+.+.|.++|...-. . ...+ . ...+|+ -+++.+++++++.+++.|+
T Consensus 281 --~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l-~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 281 --SRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSL-PLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred --CHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEc-cCCCCCCHHHHHHHHHHhC
Confidence 124678888888862211 0 1110 0 147887 4677889999999988763
No 312
>PLN02955 8-amino-7-oxononanoate synthase
Probab=98.18 E-value=8e-05 Score=85.22 Aligned_cols=170 Identities=12% Similarity=0.021 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHH--hhhhccCCCCCccccccCceEEEecCC
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKM--INHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~--~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
.+..++=+.|++++|.+. .++.++|..||+.++.+.-... +..... +....+.+||+.+.
T Consensus 147 ~~h~~LE~~LA~f~g~e~-----------all~sSGy~AN~~~i~aL~~~~~~~~~~~~-------~~~~~~d~i~~D~~ 208 (476)
T PLN02955 147 TYHRLLESSLADLKKKED-----------CLVCPTGFAANMAAMVAIGSVASLLAASGK-------PLKNEKVAIFSDAL 208 (476)
T ss_pred HHHHHHHHHHHHHHCCCc-----------EEEECChHHHHHHHHHHHhhcccccccccc-------ccCCCCcEEEEecc
Confidence 344555567888888765 4788889999988776531110 000000 00112457899999
Q ss_pred cchhHHHHHHhC----CCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCC
Q psy13453 640 SNSSVEKSAIIG----DVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNI 715 (764)
Q Consensus 640 aH~Sv~kAa~~l----Gl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~gl 715 (764)
.|.|+..++++. +..+...+ .-|+++|++.|++... . ..+|+.-.--...|.+-|+++|.++|++||+
T Consensus 209 ~HaSI~dG~~ls~~~~~a~~~~f~-----HND~~~Le~~L~~~~~--~-~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga 280 (476)
T PLN02955 209 NHASIIDGVRLAERQGNVEVFVYR-----HCDMYHLNSLLSSCKM--K-RKVVVTDSLFSMDGDFAPMEELSQLRKKYGF 280 (476)
T ss_pred chHHHHHHHHhccccCCceEEEeC-----CCCHHHHHHHHHhCCC--C-ceEEEEeCCCCCCCCcCCHHHHHHHHHHcCc
Confidence 999999999987 34555444 2468999999976532 2 2344444335667999999999999999999
Q ss_pred EEEEeccccccccccchhhhh--hcCC-CcccEEEEcCCccCCCCc
Q psy13453 716 WLHVDAAYAGSALLLPEYAHL--KRGL-EYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 716 wLHVDaA~Gg~~l~~~~~r~~--l~gi-e~aDSit~d~HK~l~~P~ 758 (764)
+|.||-||+.+.+- +..+.. .-|+ ...|-++.++-|.++..-
T Consensus 281 ~LiVDEAH~~Gv~G-~~G~G~~e~~g~~~di~ii~~TLsKA~G~~G 325 (476)
T PLN02955 281 LLVIDDAHGTFVCG-ENGGGVAEEFNCEADVDLCVGTLSKAAGCHG 325 (476)
T ss_pred EEEEcccccCceec-CCCCcHHHHhCCCCCCcEEEEeCccchhccC
Confidence 99999999976542 211111 1122 356899999999987553
No 313
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=98.17 E-value=7.5e-05 Score=84.21 Aligned_cols=130 Identities=12% Similarity=0.139 Sum_probs=84.1
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
.++.+.|+++.+.+ ...|+.+||+||..|+.+||....... +..++.+|.....-|-+.
T Consensus 85 ~~l~~~l~~~~~~~-----------~~~~~~sGseA~e~a~klar~~~~~~~----------~~~~~~ii~~~~~~HG~~ 143 (403)
T PRK05093 85 LRLAKKLIDATFAE-----------RVFFANSGAEANEAAFKLARRYACDRH----------GPEKTEIIAFHNSFHGRT 143 (403)
T ss_pred HHHHHHHHhhCCCC-----------EEEEeCchHHHHHHHHHHHHHHHhhcC----------CCCCCeEEEEcCCcCCch
Confidence 45556667766543 358999999999999999987643211 011234667777778765
Q ss_pred HHHHHhCCC------------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc----ccHHHHHH
Q psy13453 645 EKSAIIGDV------------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF----DNLEELGP 708 (764)
Q Consensus 645 ~kAa~~lGl------------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai----Dpl~eIa~ 708 (764)
.-+..+.|- ++..+|-+ |++++++.+.+. +.+|+..-.....|.+ +.+++|++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~------~aaiiiep~~~~gg~~~~~~~~l~~l~~ 212 (403)
T PRK05093 144 LFTVSVGGQPKYSDGFGPKPADITHVPFN-----DLAAVKAVIDDH------TCAVVVEPIQGEGGVIPATPEFLQGLRE 212 (403)
T ss_pred hhhHhhcCChhhhhcCCCCCCCcEEeCCC-----CHHHHHHHhcCC------eEEEEEecccCCCCCccCCHHHHHHHHH
Confidence 544443221 22333322 688898888532 3355555333333433 45999999
Q ss_pred HHHhcCCEEEEecccccc
Q psy13453 709 ICQEYNIWLHVDAAYAGS 726 (764)
Q Consensus 709 i~~~~glwLHVDaA~Gg~ 726 (764)
+|++||+|+++|-+|.+.
T Consensus 213 l~~~~g~~lI~DEv~~g~ 230 (403)
T PRK05093 213 LCDQHNALLIFDEVQTGM 230 (403)
T ss_pred HHHHcCCEEEEechhhCC
Confidence 999999999999999864
No 314
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=98.17 E-value=3.6e-05 Score=85.25 Aligned_cols=154 Identities=14% Similarity=0.097 Sum_probs=100.3
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
++++.+++.++.++ ...++|+|++++...++.+. .. + .|++.+-+.....
T Consensus 58 ~lr~~ia~~~~~~~---------~~i~it~Ga~~~l~~~~~~~-----~~---------------~-~v~i~~P~y~~~~ 107 (354)
T PRK06358 58 ELRKRIASFEQLDL---------ENVILGNGATELIFNIVKVT-----KP---------------K-KVLILAPTFAEYE 107 (354)
T ss_pred HHHHHHHHHhCCCh---------hhEEECCCHHHHHHHHHHHh-----CC---------------C-cEEEecCChHHHH
Confidence 45556666667765 36789999999876655431 10 1 2445555556667
Q ss_pred HHHHhCCCceEEEecCCC--CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHHHHHHHhcCCEEEEe
Q psy13453 646 KSAIIGDVPVRQLRSDDN--GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEELGPICQEYNIWLHVD 720 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~~--g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eIa~i~~~~glwLHVD 720 (764)
.++...|.+++.+|++.+ +.+| +++.+.+.+. +-+|+.+..++.||.+-+ +.+|.++|++|++|+.+|
T Consensus 108 ~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~------~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~D 180 (354)
T PRK06358 108 RALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEE------IDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIID 180 (354)
T ss_pred HHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccC------CCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEe
Confidence 778889999999998743 4788 6655555321 446667788999998864 788888899999999999
Q ss_pred ccccccccccchhhhhhcCCCccc--EEEEcCCccCCCC
Q psy13453 721 AAYAGSALLLPEYAHLKRGLEYVD--SFDFNTHKWLLVN 757 (764)
Q Consensus 721 aA~Gg~~l~~~~~r~~l~gie~aD--Sit~d~HK~l~~P 757 (764)
.+|.-+..- +.....+..+..-+ -+.-++-|.++.|
T Consensus 181 e~Y~~~~~~-~~~~~~~~~~~~~~~vi~~~S~SK~~gl~ 218 (354)
T PRK06358 181 EAFMDFLEE-NETISMINYLENFKNLIIIRAFTKFFAIP 218 (354)
T ss_pred CcccccCCC-ccchhHHHhccCCCCEEEEEechhhccCc
Confidence 999754421 11111111121111 3456888988733
No 315
>KOG0257|consensus
Probab=98.17 E-value=4.9e-05 Score=83.73 Aligned_cols=171 Identities=11% Similarity=0.025 Sum_probs=120.5
Q ss_pred ccccCCCCChHHHHHHHHHHhhccc-CccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHH
Q psy13453 526 NAYFPTGSSYPSIVGDMLSGAFGLI-GFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVS 604 (764)
Q Consensus 526 ~~~~~~~~~~~~~lad~l~~~lN~n-~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~A 604 (764)
++.-...-..|..+.+.+.....-. ...|.-.-...++-..+.+.+++++|-... ...+..+|.|+.++...+
T Consensus 36 LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~------~~~eVlVT~GA~~ai~~~ 109 (420)
T KOG0257|consen 36 LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLD------PDDEVLVTAGANEAISSA 109 (420)
T ss_pred ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccC------CcccEEEecCchHHHHHH
Confidence 4443333445666666666554432 333444556667778888888887764321 124688999999998888
Q ss_pred HHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecC--------CCCcccHHHHHHHHH
Q psy13453 605 ILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSD--------DNGVLRGDALLTAVK 676 (764)
Q Consensus 605 l~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d--------~~g~md~~~Le~~I~ 676 (764)
++.-.+. ...|++-+=.-.+-.-...+.|...+.||.. +++.+|++.|+.+|.
T Consensus 110 ~~~l~~~-------------------GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t 170 (420)
T KOG0257|consen 110 LLGLLNP-------------------GDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKIT 170 (420)
T ss_pred HHHHcCC-------------------CCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhcc
Confidence 7743221 1224444445555566677888876777654 688999999999998
Q ss_pred HhhhcCCCceEEEEeeccCCccccc---cHHHHHHHHHhcCCEEEEeccccccc
Q psy13453 677 EDLAKGLIPCCLIATLGTTGTCAFD---NLEELGPICQEYNIWLHVDAAYAGSA 727 (764)
Q Consensus 677 ~~~~~G~~p~~VvataGTT~~GaiD---pl~eIa~i~~~~glwLHVDaA~Gg~~ 727 (764)
+.++ +|+.+..++.+|.+- .|++|++||++||+|+..|-+|-...
T Consensus 171 ~kTk------~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v 218 (420)
T KOG0257|consen 171 EKTK------AIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLV 218 (420)
T ss_pred CCcc------EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHh
Confidence 8755 999999999999984 68889999999999999999987643
No 316
>KOG2862|consensus
Probab=98.14 E-value=7.1e-05 Score=79.46 Aligned_cols=193 Identities=15% Similarity=0.110 Sum_probs=129.0
Q ss_pred ccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHH
Q psy13453 528 YFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILV 607 (764)
Q Consensus 528 ~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~a 607 (764)
+.|++.+.+.-+ ..+.|.|... ..+|.+-.+-.++++-+...|.-... .--+|.+.|+-+. -+
T Consensus 21 ~gPGPsnl~~~V----~~A~~~~~lg-h~sPe~~qIm~~v~egikyVFkT~n~--------~tf~isgsGh~g~----E~ 83 (385)
T KOG2862|consen 21 LGPGPSNLSGRV----QEAMSRPSLG-HMSPEFVQIMDEVLEGIKYVFKTANA--------QTFVISGSGHSGW----EA 83 (385)
T ss_pred ecCCCcCCCHHH----HHhhcCCccc-cCCHHHHHHHHHHHHHHHHHhccCCC--------ceEEEecCCcchH----HH
Confidence 344444444333 3344444332 46899999999999999999865442 1224445555433 33
Q ss_pred HHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH--HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCc
Q psy13453 608 AKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE--KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIP 685 (764)
Q Consensus 608 AR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~--kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p 685 (764)
|.-..+. |...+++-...-.+-. ..++.+|++|..|+.|-......+.+++++... +|
T Consensus 84 al~N~le---------------Pgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh-----~p 143 (385)
T KOG2862|consen 84 ALVNLLE---------------PGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQH-----KP 143 (385)
T ss_pred HHHhhcC---------------CCCeEEEEEechHHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhc-----CC
Confidence 3222221 2223444444444432 336678999999998877789999999999774 58
Q ss_pred eEEEEeeccCCcccccc-HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 686 CCLIATLGTTGTCAFDN-LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 686 ~~VvataGTT~~GaiDp-l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
-+|+.|.|.|.||..+| ++.+.++|++|+..|.||+.-..+. .+++..--|+ |..-.--.|.+++|.|.|++
T Consensus 144 ~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlgg---t~F~mDewgV---DvaytgSQKaL~aP~GLsii 216 (385)
T KOG2862|consen 144 KAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGG---TEFEMDEWGV---DVAYTGSQKALGAPAGLSII 216 (385)
T ss_pred ceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCC---ccceehhhcc---cEEEecchhhcCCCCCccee
Confidence 89999999999999999 6777899999999999998633222 2223222344 87778889999999988764
No 317
>PTZ00376 aspartate aminotransferase; Provisional
Probab=98.12 E-value=6.9e-05 Score=84.54 Aligned_cols=148 Identities=14% Similarity=0.084 Sum_probs=101.1
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEE--EeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 554 WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGI--IQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~Gv--fTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
|.......++=+.+.+|+.+.-+.+-+ ....+ .|.||++|...++.+.+.- .. +.
T Consensus 68 Y~~~~G~~~lR~aia~~~~~~~~~~~~-------~~~v~~~~t~G~~~al~~~~~~l~~~-~~---------------~G 124 (404)
T PTZ00376 68 YLPIEGLQSFIEAAQKLLFGEASYALA-------EKRIATVQALSGTGALRLGFEFLKRF-LP---------------AG 124 (404)
T ss_pred CCCCCCCHHHHHHHHHHhcCCCccccc-------cCeEEEeeccCcchHHHHHHHHHHHh-cC---------------CC
Confidence 433334445555566666443221110 12344 3889999976665543322 11 12
Q ss_pred eEEEecCCcchhHHHHHHhCCCceEEEecC--CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHH
Q psy13453 632 LVAYTSDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEEL 706 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d--~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eI 706 (764)
..|++.+-+.......++..|.+++.||.+ +++.+|++.+++++++... ...+++....++.||.+ +.+++|
T Consensus 125 d~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~---~~~~~~~~~p~NPTG~~~s~~~~~~l 201 (404)
T PTZ00376 125 TTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPN---GSVVLLHACAHNPTGVDPTEEQWKEI 201 (404)
T ss_pred CEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCC---CCEEEEeCCCCCCCCCCCCHHHHHHH
Confidence 256777777888888999999999999983 3588999999999865321 23567677888999988 577788
Q ss_pred HHHHHhcCCEEEEeccccccc
Q psy13453 707 GPICQEYNIWLHVDAAYAGSA 727 (764)
Q Consensus 707 a~i~~~~glwLHVDaA~Gg~~ 727 (764)
+++|++|++|+++|-+|....
T Consensus 202 ~~~a~~~~~~ii~De~Y~~~~ 222 (404)
T PTZ00376 202 ADVMKRKNLIPFFDMAYQGFA 222 (404)
T ss_pred HHHHHhCCcEEEEehhhcCcc
Confidence 889999999999999998644
No 318
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=98.10 E-value=0.00011 Score=84.61 Aligned_cols=196 Identities=14% Similarity=0.095 Sum_probs=130.3
Q ss_pred HHHHHHHHHHhhc---cc-CccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHH
Q psy13453 536 PSIVGDMLSGAFG---LI-GFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRK 611 (764)
Q Consensus 536 ~~~lad~l~~~lN---~n-~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~ 611 (764)
...+.+.+...+. .. ...|........+=+.+.+++....|...+ ....++|+|+++|..+.+.+-
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~-------~~~IiiT~G~q~al~l~~~~l--- 175 (459)
T COG1167 106 LEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCE-------PEQIVITSGAQQALDLLLRLL--- 175 (459)
T ss_pred HHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccC-------cCeEEEeCCHHHHHHHHHHHh---
Confidence 3445555554442 22 344555567777777888888877777653 236899999998865443321
Q ss_pred HhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEe
Q psy13453 612 MINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIAT 691 (764)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~Vvat 691 (764)
. .|...|.+-+-+++....+....|++++.||+|++| ||+++|++.++.. +.-++.+..
T Consensus 176 -~---------------~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G-~~~e~le~~~~~~----~~k~~y~~P 234 (459)
T COG1167 176 -L---------------DPGDTVLVEDPTYPGALQALEALGARVIPVPVDEDG-IDPEALEEALAQW----KPKAVYVTP 234 (459)
T ss_pred -C---------------CCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCCC-CCHHHHHHHHhhc----CCcEEEECC
Confidence 1 134478899999999999999999999999999766 9999999998764 122444555
Q ss_pred eccCCccccccH---HHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcc--cEEEEcCCccCCCCcCceee
Q psy13453 692 LGTTGTCAFDNL---EELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYV--DSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 692 aGTT~~GaiDpl---~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~a--DSit~d~HK~l~~P~~~g~l 763 (764)
...+.+|.+=++ .+|.++|++|++|++=|-.|+-...-.+.-. -+.++..- =-..-++.|.+.--.-+|.+
T Consensus 235 ~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~-~l~~ld~~~rViy~gSFSK~l~PglRlG~v 310 (459)
T COG1167 235 TFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPP-PLKALDAPGRVIYLGSFSKTLAPGLRLGYV 310 (459)
T ss_pred CCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCC-ChHhhCCCCCEEEEeeehhhcccccceeee
Confidence 566778877544 5699999999999999999987543321111 11122110 12345677777655555544
No 319
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.09 E-value=2.2e-05 Score=90.28 Aligned_cols=164 Identities=15% Similarity=0.090 Sum_probs=120.5
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
.++.+..++.||.+.+| ..+.|.|.||...+.+.. .++..|++...+|.|+
T Consensus 73 ~eAqe~aA~~fgAd~ty----------FvvNGTS~ank~vi~a~~-------------------~~GD~VLvdRN~HKSi 123 (557)
T COG1982 73 KEAQELAARVFGADHTY----------FVVNGTSTANKAVINAVL-------------------TPGDKVLVDRNCHKSI 123 (557)
T ss_pred HHHHHHHHHHhCCCceE----------EEECCccHHHHHHHHhhc-------------------CCCCEEEecCCccHHH
Confidence 44556789999998764 356777777876665432 1234688999999999
Q ss_pred HHHHHhCCCceEEEecC--C----CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEE
Q psy13453 645 EKSAIIGDVPVRQLRSD--D----NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLH 718 (764)
Q Consensus 645 ~kAa~~lGl~v~~Vp~d--~----~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLH 718 (764)
..+..+.|..-+.+... + -|.|+.+.+++++.+....- -++++|.+ |..|.+=++++|.+.+..+++|+-
T Consensus 124 ~~glilaGa~Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~---k~~vitnp-TYdGv~~n~~~i~~~~~~~~a~v~ 199 (557)
T COG1982 124 HHGLILAGATPVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAE---KLAVITNP-TYDGVCYNLRKIVELLHHYGAWVL 199 (557)
T ss_pred HHHHHHcCCceEEecCCCCccccccCCCCHHHHHHHHHhChhhh---eeEEEecC-ccceEeecHHHHHHHHhhcCceEE
Confidence 99988889865555442 2 36799999999997654321 25666665 557999999999999999999999
Q ss_pred EeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCcee
Q psy13453 719 VDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSA 762 (764)
Q Consensus 719 VDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~ 762 (764)
+|-|++...-+++..-..-. -..+|-+|-|.||.+++=-++|.
T Consensus 200 ~deah~~~~~~~~~l~~~~~-~~~~~~~tqS~HK~l~alSQaS~ 242 (557)
T COG1982 200 YDEAHPAHFDFSPMLPESAL-NGGADFVTQSTHKLLAALSQASM 242 (557)
T ss_pred hhhcCcccccccccCcchhh-hcCceEEEechhhhhhhhhhhHH
Confidence 99999998777654333110 02469999999999987655554
No 320
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=98.08 E-value=4.1e-05 Score=85.39 Aligned_cols=148 Identities=17% Similarity=0.136 Sum_probs=91.8
Q ss_pred EEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceE------EEecCCCC
Q psy13453 591 GIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVR------QLRSDDNG 664 (764)
Q Consensus 591 GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~------~Vp~d~~g 664 (764)
.+|+++||+||..|+..||... + ++.+|......|-+...++...|.... .++.....
T Consensus 87 ~~~~~SGseA~~~Al~~ar~~~-~---------------~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (375)
T PRK04260 87 AFFCNSGAEANEAAIKIARKAT-G---------------KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA 150 (375)
T ss_pred EEEcCccHHHHHHHHHHHHHhc-C---------------CCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe
Confidence 5799999999999999998641 1 123566677889877777665443211 01100001
Q ss_pred -cccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc----cHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcC
Q psy13453 665 -VLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD----NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRG 739 (764)
Q Consensus 665 -~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD----pl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~g 739 (764)
.-|+++|++.+.+. ..+|+.......+|.+- .+++|.++|+++|+++++|.+|.+...-..-+.....|
T Consensus 151 ~~~dl~~l~~~l~~~------~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~ 224 (375)
T PRK04260 151 IFNDLNSVKALVNKN------TAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYG 224 (375)
T ss_pred CCCCHHHHHHhcCCC------eEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhC
Confidence 24789998877432 34666655556667764 49999999999999999999997632211111111234
Q ss_pred CCcccEEEEcCCccCCCCcCceee
Q psy13453 740 LEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 740 ie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+ ..|-+ ++.|.++.-+..|.+
T Consensus 225 ~-~pdi~--t~sK~l~~G~~ig~~ 245 (375)
T PRK04260 225 I-EPDIF--TLAKGLANGVPVGAM 245 (375)
T ss_pred C-CCCEE--EecccccCCcceEEE
Confidence 4 34633 679987632334443
No 321
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=98.07 E-value=4.1e-05 Score=84.47 Aligned_cols=162 Identities=11% Similarity=0.005 Sum_probs=105.9
Q ss_pred eeeeHHHHH---hhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----C
Q psy13453 20 LIYESFKAT---HSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----N 91 (764)
Q Consensus 20 ~~YSv~KAa---~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~ 91 (764)
.|.|+..+. ...|+.. +.||+++++.+|+++|+++++++ +-+++-+.+++++|.+.|+++|++ +
T Consensus 97 ~~~s~~~~~~~~~~~G~~v---~~v~~~~~~~~d~~~l~~~l~~~-----~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~ 168 (353)
T TIGR03235 97 EHPAVLEPIRALERNGFTV---TYLPVDESGRIDVDELADAIRPD-----TLLVSIMHVNNETGSIQPIREIAEVLEAHE 168 (353)
T ss_pred ccHHHHHHHHHHHhcCCEE---EEEccCCCCcCCHHHHHHhCCCC-----CEEEEEEcccCCceeccCHHHHHHHHHHcC
Confidence 466665443 3456655 99999988999999999998642 224457889999999999999886 8
Q ss_pred CCceecccc--------------------cccc-----ceeeeecCCCccccccccccccC-----CcccCCCCc-ccHH
Q psy13453 92 GPLKVGGVL--------------------RRVY-----SSCLVPRGQKSLRTTVLFHFLFQ-----HWQIPLGRR-FRAL 140 (764)
Q Consensus 92 ~wlHVDa~l--------------------~~~y-----~s~ll~rd~~~l~~~~s~~~d~~-----d~tle~SRr-~~AL 140 (764)
+|+|||++. .+++ +++++++++...... ..+.+. ..--.++.. ...+
T Consensus 169 ~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g~g~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~gt~~~~~~~ 246 (353)
T TIGR03235 169 AFFHVDAAQVVGKITVDLSADRIDLISCSGHKIYGPKGIGALVIRKRGKPKAP--LKPIMFGGGQERGLRPGTLPVHLIV 246 (353)
T ss_pred CEEEEEchhhcCCccccccccCCCEEEeehhhcCCCCceEEEEEccCcccccc--cCceeeCCCCcCccccCCCChHHHH
Confidence 999999942 1121 135555543211100 010000 000122332 2234
Q ss_pred HHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC---ceeEEEEe
Q psy13453 141 KLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS---MGLVCFRL 193 (764)
Q Consensus 141 klWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~---l~iV~Fry 193 (764)
.+..+++.+ .+|..++.++..++++++.+.|++ ++++++.+++ ..+++|..
T Consensus 247 al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~ 300 (353)
T TIGR03235 247 GMGEAAEIA-RRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSI 300 (353)
T ss_pred HHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEe
Confidence 556666654 468888899999999999999988 8999987654 44788864
No 322
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=98.06 E-value=0.00013 Score=82.33 Aligned_cols=216 Identities=13% Similarity=-0.021 Sum_probs=123.4
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCccccccCCCC--ChHHHHHHHHHHhhcc-----cCccccCCchHHHHHHHHHHHHH
Q psy13453 500 EDWRHIMRDMNTVIMPGITHWQSPQFNAYFPTGS--SYPSIVGDMLSGAFGL-----IGFSWLSSPACTELEVLVMNWLG 572 (764)
Q Consensus 500 ~~~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~--~~~~~lad~l~~~lN~-----n~~~~~~sp~~t~lE~~v~~~la 572 (764)
..++++.+.+.+.-. .|..+..+.+-.+.+ .++..+.+.+...++. ....|...+....+-+.+.+|+.
T Consensus 15 ~~~~~~~~~~~~~~~----~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~ 90 (409)
T PRK07590 15 YLFPEIARRVNAFRE----ANPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDY 90 (409)
T ss_pred chHHHHHHHHHHHhh----hcCCCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHH
Confidence 346666666665432 233333333322222 1233344555544432 23445555666778888888887
Q ss_pred HHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCC
Q psy13453 573 KALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGD 652 (764)
Q Consensus 573 ~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lG 652 (764)
+..|++-+ ....++|+|++++... +.. .+. +...|++.+=+.......+...|
T Consensus 91 ~~~g~~~~-------~~~I~it~Ga~~al~~-l~~----~~~---------------~gd~V~v~~P~Y~~~~~~~~~~g 143 (409)
T PRK07590 91 QARGCDIS-------ADEIFISDGAKCDTGN-ILD----IFG---------------PDNTIAVTDPVYPVYVDTNVMAG 143 (409)
T ss_pred HhcCCcCC-------hhhEEECCCHHHHHHH-HHH----hcC---------------CCCEEEEeCCCCcchHHHHHHcC
Confidence 77665432 2357889998887544 221 111 11235666666677778888888
Q ss_pred Cc-----------eEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc---cHHHHHHHHHhcCCEEE
Q psy13453 653 VP-----------VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD---NLEELGPICQEYNIWLH 718 (764)
Q Consensus 653 l~-----------v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD---pl~eIa~i~~~~glwLH 718 (764)
.. ++.||++.++.+.++. ++ ..+-+|+.+..++.||.+= .+++|+++|++||+|+.
T Consensus 144 ~~~~~~~~~~~~~~~~v~~~~~~~~~~d~-~~---------~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI 213 (409)
T PRK07590 144 RTGEANEDGRYSGIVYLPCTAENNFVPEL-PE---------EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLIL 213 (409)
T ss_pred CcccccccccccceeEeecccccCCcccC-cc---------cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEE
Confidence 86 8899987543333321 11 1233555567889999884 56678888999999999
Q ss_pred EeccccccccccchhhhhhcCCCcc-c-EE-EEcCCccCCCC
Q psy13453 719 VDAAYAGSALLLPEYAHLKRGLEYV-D-SF-DFNTHKWLLVN 757 (764)
Q Consensus 719 VDaA~Gg~~l~~~~~r~~l~gie~a-D-Si-t~d~HK~l~~P 757 (764)
+|-+|+-...- ......+..+... + .| .-++.|.++.|
T Consensus 214 ~De~Y~~~~~~-~~~~~~~~~~~~~~~~vi~~~SfSK~~~~p 254 (409)
T PRK07590 214 FDAAYEAFISD-PSLPHSIYEIEGARECAIEFRSFSKTAGFT 254 (409)
T ss_pred EEccchhhccC-CCCCcchhhCCCcccceEEEecCccccCCc
Confidence 99999864321 1100111122111 1 34 44899988644
No 323
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=98.05 E-value=7.4e-05 Score=83.14 Aligned_cols=159 Identities=12% Similarity=-0.008 Sum_probs=102.6
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
..+.+.+++.+|.+++ ..++|+|++++..+++.+. ... ++..|++++-.+...
T Consensus 62 ~~lr~~ia~~~~~~~~---------~I~~t~G~~~~l~~~~~~~----~~~--------------g~~~vlv~~p~y~~~ 114 (364)
T PRK04781 62 PGLRSALAALYGCAPE---------QLLIGRGSDEAIDLLVRAL----CVP--------------GRDAVLVTPPVFGMY 114 (364)
T ss_pred HHHHHHHHHHhCcChH---------HEEEeCCHHHHHHHHHHHh----cCC--------------CCCeEEEcCCChHHH
Confidence 4556667777787653 6789999999876655422 110 112456666565556
Q ss_pred HHHHHhCCCceEEEecC--CC-CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh--cCCEEEE
Q psy13453 645 EKSAIIGDVPVRQLRSD--DN-GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE--YNIWLHV 719 (764)
Q Consensus 645 ~kAa~~lGl~v~~Vp~d--~~-g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~--~glwLHV 719 (764)
...++..|.+++.||.+ ++ +.+|++++.+.+... .+-+|+.+..++.||.+-+.+++.++++. +++|+++
T Consensus 115 ~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~-----~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~ 189 (364)
T PRK04781 115 AVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALAS-----NAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVV 189 (364)
T ss_pred HHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhcc-----CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEE
Confidence 66678899999999984 23 468999886654321 13366667899999999998888888764 4899999
Q ss_pred eccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 720 DAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 720 DaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
|.||+-+.. .+.....++...+ =-+.-++-|.++.|
T Consensus 190 Deay~~f~~-~~~~~~~~~~~~~-vi~~~SfSK~~gl~ 225 (364)
T PRK04781 190 DEAYGEFSD-VPSAVGLLARYDN-LAVLRTLSKAHALA 225 (364)
T ss_pred eCcchhhcC-CcchHHHHhhCCC-EEEEecChhhcccc
Confidence 999986432 1111111111111 14567888987744
No 324
>PRK09275 aspartate aminotransferase; Provisional
Probab=98.04 E-value=0.00019 Score=83.47 Aligned_cols=192 Identities=10% Similarity=0.051 Sum_probs=113.0
Q ss_pred HHHHHHHHHHhhcccCccccCCchHHHHHHHHHH-HHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhh
Q psy13453 536 PSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMN-WLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMIN 614 (764)
Q Consensus 536 ~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~-~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~ 614 (764)
+..+-++...... ..|...+....+-+.+++ ++.+..+..... .+....++|.|++++..+++.+.....+-
T Consensus 115 ~~~v~e~~~~~~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~----~~~~~I~vT~Ga~~al~~~~~aL~~~~ll 187 (527)
T PRK09275 115 DEFVYELVDGIIG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPP----KGEFDLFAVEGGTAAMCYIFDSLKENGLL 187 (527)
T ss_pred CHHHHHHHHHHhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCC----CCcCeEEEeCCHHHHHHHHHHHHhhhhcC
Confidence 4445554444433 246666666555555555 555443321100 01125789999999988777643221111
Q ss_pred hhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCce--EEEecC--CCCcccHHHHHHHHHHhhhcCCCceEEEE
Q psy13453 615 HWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPV--RQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLIA 690 (764)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v--~~Vp~d--~~g~md~~~Le~~I~~~~~~G~~p~~Vva 690 (764)
.+...|++..-........+.+.|.++ +.++++ +++.+|+++|++++.+. +-+|++
T Consensus 188 --------------~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~------tkai~l 247 (527)
T PRK09275 188 --------------KAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPS------IKALFL 247 (527)
T ss_pred --------------CCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCC------CCEEEE
Confidence 112245556666666666777776554 455544 34789999999877543 337777
Q ss_pred eeccCCcccccc---HHHHHHHHHh--cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 691 TLGTTGTCAFDN---LEELGPICQE--YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 691 taGTT~~GaiDp---l~eIa~i~~~--~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+..++.||.+=+ +++|+++|++ +++|+.+|-+|+-.. ..+...+.-...---+.-++.|.++.|
T Consensus 248 ~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~---~~~~s~~~~~~~~~I~v~SfSK~f~mt 316 (527)
T PRK09275 248 VNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFV---DDFRSLFAVLPYNTILVYSFSKYFGAT 316 (527)
T ss_pred eCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhc---ccccCHHHhCCCCEEEEeehhhhccCc
Confidence 789999999955 7778888965 599999999998643 122111111111123345778877644
No 325
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=98.03 E-value=7.2e-05 Score=83.37 Aligned_cols=156 Identities=11% Similarity=-0.061 Sum_probs=103.0
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
.+.+.+++.+|.+++ ..++|+|++++...++.+.. . ++..|++.+-++....
T Consensus 71 ~Lr~~ia~~~~~~~~---------~I~it~G~~~~l~~~~~~~~----~---------------~gd~vlv~~p~y~~~~ 122 (369)
T PRK08153 71 DLRHALAAHHGVAPE---------NIMVGEGIDGLLGLIVRLYV----E---------------PGDPVVTSLGAYPTFN 122 (369)
T ss_pred HHHHHHHHHhCCCHH---------HEEEcCCHHHHHHHHHHHhc----C---------------CCCEEEECCCcchHHH
Confidence 344555566677653 57889998887655444221 1 1225777788888888
Q ss_pred HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc--CCEEEEeccc
Q psy13453 646 KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY--NIWLHVDAAY 723 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~--glwLHVDaA~ 723 (764)
..+...|.+++.||.+.++ +|+++|++.+... .+-+|+.+..++.+|.+-+.+++.++++.+ ++|+.+|-+|
T Consensus 123 ~~~~~~g~~~~~vp~~~~~-~~~~~l~~~~~~~-----~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y 196 (369)
T PRK08153 123 YHVAGFGGRLVTVPYRDDR-EDLDALLDAARRE-----NAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAY 196 (369)
T ss_pred HHHHHcCCeEEEeeCCCCC-CCHHHHHHHhccc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCch
Confidence 8888899999999987664 8999888776432 123566678899999998888888777654 8999999999
Q ss_pred cccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 724 AGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 724 Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+.... -.... .+.....---+..++-|.++.|
T Consensus 197 ~~~~~-~~~~~-~~~~~~~~~i~~~SfSK~~g~~ 228 (369)
T PRK08153 197 CETAP-AGAAP-PIDTDDPNVIRMRTFSKAYGLA 228 (369)
T ss_pred hhhcC-cccch-hhhhcCCCEEEEecchHhccCc
Confidence 75321 11111 1111111124466889988755
No 326
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=98.02 E-value=0.00016 Score=80.19 Aligned_cols=164 Identities=13% Similarity=0.067 Sum_probs=105.8
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCC-ccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLP-EEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p-~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
.|.......++.+.+.+|+.+..|.+ -+ ....++|+|++++...++.+.. .. ++
T Consensus 57 ~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~-------~~~I~it~G~~~~i~~~~~~l~---~~---------------~g 111 (364)
T PRK07865 57 GYPTTAGTPELREAIVGWLARRRGVTGLD-------PAAVLPVIGSKELVAWLPTLLG---LG---------------PG 111 (364)
T ss_pred CCCCccCCHHHHHHHHHHHHHHcCCCCCC-------cccEEEccChHHHHHHHHHHHc---CC---------------CC
Confidence 45545556678888999999888764 21 2367899999998755433210 01 12
Q ss_pred eEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHHHH
Q psy13453 632 LVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEELGP 708 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eIa~ 708 (764)
..|++.+-+|.....++..+|++++.++. +++++. ..+-+|+.+..++.||.+ +.+++|.+
T Consensus 112 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-------~~~l~~---------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~ 175 (364)
T PRK07865 112 DVVVIPELAYPTYEVGARLAGATVVRADS-------LTELGP---------QRPALIWLNSPSNPTGRVLGVDHLRKVVA 175 (364)
T ss_pred CEEEECCCCcccHHHHHHhcCCEEEecCC-------hhhCCc---------ccceEEEEcCCCCCCCccCCHHHHHHHHH
Confidence 24777888899999999999998777642 223221 124466667788999977 56788899
Q ss_pred HHHhcCCEEEEeccccccccccchhh---hhhcCCC-cccEEEEcCCccCCCC
Q psy13453 709 ICQEYNIWLHVDAAYAGSALLLPEYA---HLKRGLE-YVDSFDFNTHKWLLVN 757 (764)
Q Consensus 709 i~~~~glwLHVDaA~Gg~~l~~~~~r---~~l~gie-~aDSit~d~HK~l~~P 757 (764)
+|++||+|+.+|.+|+....-.+... ..+.+.. .-.-+..++.|.++.|
T Consensus 176 ~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 228 (364)
T PRK07865 176 WARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLA 228 (364)
T ss_pred HHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCC
Confidence 99999999999999986432111000 0000110 1125677899988654
No 327
>PRK05839 hypothetical protein; Provisional
Probab=98.02 E-value=8.8e-05 Score=82.82 Aligned_cols=155 Identities=12% Similarity=0.002 Sum_probs=100.4
Q ss_pred HHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhc
Q psy13453 538 IVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQ 617 (764)
Q Consensus 538 ~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~ 617 (764)
.+.+.+....+. ...|........+-+.+.+|+.+..|.+-+ ....++|+|++++....+.+.. ...
T Consensus 41 ~~~~a~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~-------~~~I~it~G~~~al~~~~~~~~---~~~-- 107 (374)
T PRK05839 41 FIQDALKNNAHL-LNKYPKSAGEESLREAQRGFFKRRFKIELK-------ENELIPTFGTREVLFNFPQFVL---FDK-- 107 (374)
T ss_pred HHHHHHHHHhhc-cCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-------cceEEEecCcHHHHHHHHHHHh---cCC--
Confidence 344444433322 233433334456777788899888775321 1367899999987655443221 100
Q ss_pred cCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCC--CcccHHHHHHHHHHhhhcCCCceEEEEeeccC
Q psy13453 618 SKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDN--GVLRGDALLTAVKEDLAKGLIPCCLIATLGTT 695 (764)
Q Consensus 618 ~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~--g~md~~~Le~~I~~~~~~G~~p~~VvataGTT 695 (764)
+...|++..-+......++...|++++.||.+++ +.+|+.+. .+. .+-+|+.+..++
T Consensus 108 ------------~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~--~~~-------~~k~v~i~nP~N 166 (374)
T PRK05839 108 ------------QNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEK--ELQ-------EVDLVILNSPNN 166 (374)
T ss_pred ------------CCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchh--hhc-------cccEEEEeCCCC
Confidence 1224666667777788888999999999999754 45554432 221 133666678889
Q ss_pred Ccccc---ccHHHHHHHHHhcCCEEEEecccccc
Q psy13453 696 GTCAF---DNLEELGPICQEYNIWLHVDAAYAGS 726 (764)
Q Consensus 696 ~~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~ 726 (764)
.||.+ +.+++|+++|++||+|+.+|-+|+-.
T Consensus 167 PTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~ 200 (374)
T PRK05839 167 PTGRTLSLEELIEWVKLALKHDFILINDECYSEI 200 (374)
T ss_pred CcCcccCHHHHHHHHHHHHHcCCEEEeccchhhc
Confidence 99988 46677778899999999999999864
No 328
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=98.00 E-value=0.00021 Score=78.16 Aligned_cols=217 Identities=9% Similarity=-0.043 Sum_probs=131.1
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
.|+++..+++..|... +.+| .+|++.+++.|++... ..++.+ +.+.+.+++|.+.|++++++ +++
T Consensus 94 ~~~~~~~~~~~~g~~~---~~~~-----~~~~~~le~~i~~~~~-~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~ 164 (349)
T cd06454 94 NHASIIDGIRLSGAKK---RIFK-----HNDMEDLEKLLREARR-PYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAI 164 (349)
T ss_pred hhHHHHHHHHHcCCce---EEec-----CCCHHHHHHHHHHhhc-cCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCE
Confidence 5788888888888776 5555 3588899999986431 123444 56778889999999999886 889
Q ss_pred ceecccccc----ccce---eeeec-CCCcc-----cccccc--cc-----c--------cCCcccCCCC-cccHHHHHH
Q psy13453 94 LKVGGVLRR----VYSS---CLVPR-GQKSL-----RTTVLF--HF-----L--------FQHWQIPLGR-RFRALKLWM 144 (764)
Q Consensus 94 lHVDa~l~~----~y~s---~ll~r-d~~~l-----~~~~s~--~~-----d--------~~d~tle~SR-r~~ALklWa 144 (764)
+++|+.... .... .+... +...+ +..+.. .+ . ...+...++- ....+.+.+
T Consensus 165 livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 244 (349)
T cd06454 165 LFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVGGYIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALA 244 (349)
T ss_pred EEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccCCEEECCHHHHHHHHHhchhhhccCCCCHHHHHHHHH
Confidence 999996421 1110 00000 00000 000000 00 0 0011122222 222334455
Q ss_pred HHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHH
Q psy13453 145 TLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRII 224 (764)
Q Consensus 145 tL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~ 224 (764)
+++.+-. +.++.++..++++++.+.+++. +++++.++...+.++...+ +.-..++.+.|.
T Consensus 245 ~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~L~ 304 (349)
T cd06454 245 ALEVLQG--GPERRERLQENVRYLRRGLKEL-GFPVGGSPSHIIPPLIGDD-----------------PAKAVAFSDALL 304 (349)
T ss_pred HHHHHhc--CHHHHHHHHHHHHHHHHHHHhc-CCcccCCCCCcEEEEeCCC-----------------hHHHHHHHHHHH
Confidence 5655532 5667788889999999999886 7887776665555554210 112367888888
Q ss_pred hcCcEEEEece---eCCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 225 ARKVIYIVKGS---FQDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 225 ~~G~~~vs~t~---l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
++|........ ..+...+|+++ +...++++++++++.|+++
T Consensus 305 ~~gI~~~~~~~~~~~~~~~~iRi~~-~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 305 ERGIYVQAIRYPTVPRGTARLRISL-SAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred hCCceEEEecCCccCCCCCeEEEEE-eCCCCHHHHHHHHHHHHHh
Confidence 88875433211 12246899976 4556799999999999875
No 329
>PRK08637 hypothetical protein; Provisional
Probab=97.99 E-value=0.00021 Score=80.17 Aligned_cols=117 Identities=14% Similarity=0.058 Sum_probs=81.9
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHH-HhCCCceEEEecC-CCCccc
Q psy13453 590 GGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSA-IIGDVPVRQLRSD-DNGVLR 667 (764)
Q Consensus 590 ~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa-~~lGl~v~~Vp~d-~~g~md 667 (764)
..++|+|++++..+.+.+.. . +...|++..-++.....++ ...|.+++.+|.+ +++.+|
T Consensus 71 ~I~it~G~~~al~~~~~~l~----~---------------~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d 131 (388)
T PRK08637 71 LPIVTNALTHGLSLVADLFV----D---------------QGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFD 131 (388)
T ss_pred eeeEccchHHHHHHHHHHhc----C---------------CCCEEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCC
Confidence 46789999998766554321 0 1124566666666666654 4579999999984 566799
Q ss_pred HHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHHHHHHHh-----cCCEEEEeccccccc
Q psy13453 668 GDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEELGPICQE-----YNIWLHVDAAYAGSA 727 (764)
Q Consensus 668 ~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eIa~i~~~-----~glwLHVDaA~Gg~~ 727 (764)
+++|+++++....+ ...+++.+..++.||.+ +.+++|+++|++ |++|+.+|-+|....
T Consensus 132 ~~~l~~~~~~~~~~--~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~ 197 (388)
T PRK08637 132 TDALKEALQAAYNK--GKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLF 197 (388)
T ss_pred HHHHHHHHHhhccC--CCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcc
Confidence 99999998732111 23456666678999977 567777777775 899999999998754
No 330
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=97.98 E-value=0.0002 Score=80.98 Aligned_cols=164 Identities=16% Similarity=0.118 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS 643 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S 643 (764)
..++.+.|+++++.+ ..+|+.+|||||..|+++||.....+ +.. .+..++.....-|-+
T Consensus 83 ~~~la~~l~~~~~~~-----------~v~~~~sGseA~e~Alk~ar~~~~~~-~~~---------~r~~ii~~~~~yHG~ 141 (406)
T PRK12381 83 VLRLAKKLIDATFAD-----------RVFFCNSGAEANEAALKLARKYAHDR-YGS---------HKSGIVAFKNAFHGR 141 (406)
T ss_pred HHHHHHHHHhhCCCC-----------eEEEcCCcHHHHHHHHHHHHHHHhhc-CCC---------CCCeEEEECCCcCCc
Confidence 344556666666543 36899999999999999998764221 000 112355566667766
Q ss_pred HHHHHHhCCCc------------eEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcc----ccccHHHHH
Q psy13453 644 VEKSAIIGDVP------------VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTC----AFDNLEELG 707 (764)
Q Consensus 644 v~kAa~~lGl~------------v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~G----aiDpl~eIa 707 (764)
..-+..+.|.. +..+|- -|+++|++.|.+. +.+|+..-....-| ..+.+++|+
T Consensus 142 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~------~aaviiEPv~~~gg~~~~~~~~l~~l~ 210 (406)
T PRK12381 142 TLFTVSAGGQPKYSQDFAPLPPDIRHAAY-----NDLNSASALIDDQ------TCAVIVEPIQGEGGVIPADKAFLQGLR 210 (406)
T ss_pred chhHHhhcCCcccccCCCCCCCCeeEeCC-----CCHHHHHHhccCC------eeEEEEeCCcCCCCCcCCCHHHHHHHH
Confidence 55454444321 222222 2688999888532 33555543333334 247899999
Q ss_pred HHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCcee
Q psy13453 708 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSA 762 (764)
Q Consensus 708 ~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~ 762 (764)
++|++||++|.+|-+|.|.-....-+.....++ ..|.+ .+-|.++.-+..|.
T Consensus 211 ~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v-~pDi~--t~sK~l~gG~~ig~ 262 (406)
T PRK12381 211 ELCDRHNALLIFDEVQTGVGRTGELYAYMHYGV-TPDVL--TTAKALGGGFPIGA 262 (406)
T ss_pred HHHHHcCCEEEEcchhhCCCCCcchhhhHhhCC-CCCEE--EehhhhhCCCceEE
Confidence 999999999999999966422111111112344 35654 44687753333443
No 331
>PLN02672 methionine S-methyltransferase
Probab=97.96 E-value=0.00015 Score=89.87 Aligned_cols=135 Identities=14% Similarity=0.179 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
+-..+.+|+++..|++.+. ....++|+|+++++..++.+.. . +...|++..-+..
T Consensus 735 lr~aLa~~la~~~Gv~~d~------~e~IIvt~Gs~elL~lll~aLl----~---------------pGD~VLVp~PtY~ 789 (1082)
T PLN02672 735 PRPSILQFIKSNYGFPTDS------CTEFVYGDTSLALFNKLVLCCV----Q---------------EGGTLCFPAGSNG 789 (1082)
T ss_pred HHHHHHHHHHHHhCcCCCC------CCEEEEeCCHHHHHHHHHHHHc----C---------------CCCEEEEeCCChH
Confidence 4578889999999986531 1245666666655544433221 1 1224667777788
Q ss_pred hHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeecc-CCcccc---ccHHHHHHHHHhcCCE
Q psy13453 643 SVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGT-TGTCAF---DNLEELGPICQEYNIW 716 (764)
Q Consensus 643 Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGT-T~~Gai---Dpl~eIa~i~~~~glw 716 (764)
....++...|.+++.||+++ ++.+|+++|++++++.. .+ .|+.+..+ +.||.+ +.+++|+++|++||+|
T Consensus 790 ~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~----~~-~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~ 864 (1082)
T PLN02672 790 TYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVK----KP-WVYISGPTINPTGLLYSNSEIEEILSVCAKYGAR 864 (1082)
T ss_pred HHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCC----CC-EEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCE
Confidence 88888999999999999973 57899999999985421 12 56666665 889988 6788888899999999
Q ss_pred EEEeccccccc
Q psy13453 717 LHVDAAYAGSA 727 (764)
Q Consensus 717 LHVDaA~Gg~~ 727 (764)
+.+|-+|+...
T Consensus 865 VIsDEaYsdL~ 875 (1082)
T PLN02672 865 VIIDTSFSGLE 875 (1082)
T ss_pred EEEeCCCCccc
Confidence 99999998543
No 332
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=97.96 E-value=6.3e-05 Score=84.13 Aligned_cols=166 Identities=15% Similarity=0.001 Sum_probs=116.2
Q ss_pred cCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCcccccc
Q psy13453 550 IGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIR 629 (764)
Q Consensus 550 n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~ 629 (764)
.......+|.+.++-.++.+.|.++++.|.++ ...++++|||.+.=.++. ...++ .
T Consensus 27 ~~~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~-------~v~~l~GsGT~a~Eaa~~----nl~~~---~---------- 82 (374)
T TIGR01365 27 PLGRSHRSKLGKEKLAEAIKKTREMLGVPADY-------LIGIVPASDTGAVEMALW----SMLGC---R---------- 82 (374)
T ss_pred hcccCcCCHHHHHHHHHHHHHHHHHhCCCCCc-------EEEEECCchHHHHHHHHH----HcCCC---C----------
Confidence 33444679999999999999999999986542 234668899887544433 22211 0
Q ss_pred CceEEEecCCcchhHH---HHHHhCCC-ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHH
Q psy13453 630 NKLVAYTSDQSNSSVE---KSAIIGDV-PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEE 705 (764)
Q Consensus 630 ~~~vi~~S~~aH~Sv~---kAa~~lGl-~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~e 705 (764)
+..++++. .++-. +.|+..|+ ++..+..+..-.+|+++++. . + -|+.|...|.+|...|+++
T Consensus 83 g~~vLv~g---~FG~r~~~eia~~~g~~~v~~l~~~~g~~~~~~~ve~----~-~------~v~~vhnETSTGv~npv~~ 148 (374)
T TIGR01365 83 GVDVLAWE---SFGKGWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDF----K-N------DVVFTWNGTTSGVRVPNGD 148 (374)
T ss_pred CCeEEEEC---HHHHHHHHHHHHhcCCCCcEEEcCCCCCCCCHHHcCC----C-C------CEEEecCCCchheeccccc
Confidence 11234443 55433 77788999 48888876555789999872 1 1 2679999999999999976
Q ss_pred HHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 706 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 706 Ia~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
|...+ ++..+.||+.-+.+....+ +++ +|.+....+|.++.|.|.|++
T Consensus 149 i~~~~--~~~lliVDavSs~g~~~l~-----~d~---iDv~~tgsQK~L~~ppGls~v 196 (374)
T TIGR01365 149 FIPAD--REGLTICDATSAAFAQDLD-----YHK---LDVVTFSWQKVLGGEGAHGML 196 (374)
T ss_pred ccccc--CCCcEEEEccchhcCCCCC-----hhH---CcEEEEechhccCCCCceEEE
Confidence 66332 5889999997555444332 223 599999999999999999876
No 333
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=97.95 E-value=0.0004 Score=76.96 Aligned_cols=132 Identities=13% Similarity=0.107 Sum_probs=91.9
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCC-ccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLP-EEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p-~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
.|.......++.+.+.+|+.+..|++ -. ....++|+|++++...++.+.. . + ++
T Consensus 51 ~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~-------~~~I~it~G~~~~i~~~~~~l~---~-~--------------~g 105 (357)
T TIGR03539 51 GYPQTWGTPELREAIVDWLERRRGVPGLD-------PTAVLPVIGTKELVAWLPTLLG---L-G--------------PG 105 (357)
T ss_pred CCCcccCCHHHHHHHHHHHHHhcCCCCCC-------cCeEEEccChHHHHHHHHHHHc---C-C--------------CC
Confidence 34444556788889999999887765 21 2367889999998655433210 0 0 12
Q ss_pred eEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc---cHHHHHH
Q psy13453 632 LVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD---NLEELGP 708 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD---pl~eIa~ 708 (764)
-.|++.+-++.+...++..+|.+++.++ |++.++. ..+-+|+.+..++.+|.+- .+++|.+
T Consensus 106 d~Vl~~~p~y~~~~~~~~~~g~~~~~v~-------~~~~l~~---------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~ 169 (357)
T TIGR03539 106 DTVVIPELAYPTYEVGALLAGATPVAAD-------DPTELDP---------VGPDLIWLNSPGNPTGRVLSVDELRAIVA 169 (357)
T ss_pred CEEEECCCCcHHHHHHHHhcCCEEeccC-------ChhhcCc---------cCccEEEEeCCCCCcCccCCHHHHHHHHH
Confidence 2577888899888888888898877663 2232221 1244677778889999875 5777899
Q ss_pred HHHhcCCEEEEeccccc
Q psy13453 709 ICQEYNIWLHVDAAYAG 725 (764)
Q Consensus 709 i~~~~glwLHVDaA~Gg 725 (764)
+|++||+|+++|.+|+.
T Consensus 170 ~a~~~~~~ii~De~y~~ 186 (357)
T TIGR03539 170 WARERGAVVASDECYLE 186 (357)
T ss_pred HHHHcCeEEEEecchhh
Confidence 99999999999999975
No 334
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=97.94 E-value=0.00019 Score=80.11 Aligned_cols=168 Identities=10% Similarity=-0.025 Sum_probs=108.2
Q ss_pred chHHHHHHHHHHHHHHHcC----CCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 558 PACTELEVLVMNWLGKALG----LPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 558 p~~t~lE~~v~~~la~llG----~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
+....+.+.+.+|+.+..| .++ ...++|+|+++++..++.+... + ++..
T Consensus 66 ~G~~~Lr~aia~~~~~~~~~~~~v~~---------~~I~it~Ga~~al~~~~~~~~~---~---------------g~~~ 118 (374)
T PRK02610 66 GGHEALKQAIAEYVNESAAGSSQITP---------ANISVGNGSDELIRSLLIATCL---G---------------GEGS 118 (374)
T ss_pred CchHHHHHHHHHHhCccccccCCCCH---------HHEEEcCChHHHHHHHHHHHcC---C---------------CCCe
Confidence 4556677777777766542 332 3578899999987655442211 1 1113
Q ss_pred EEecCCcchhHHHHHHhCCCceEEEecCC-CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH-
Q psy13453 634 AYTSDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ- 711 (764)
Q Consensus 634 i~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~-~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~- 711 (764)
|++.+-+......+++..|++++.+|.++ ++.+|+++|++++++.. +..+-+|+.+..++.||.+-+.+++.++.+
T Consensus 119 Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~--~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~ 196 (374)
T PRK02610 119 ILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQ--NPPVRVVFVVHPNSPTGNPLTAAELEWLRSL 196 (374)
T ss_pred EEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhc--CCCceEEEEeCCCCCCCCCCCHHHHHHHHhc
Confidence 56666667777888899999999999875 47899999999986421 122446666678999999977666665543
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
.+++|+.+|-+|.-+... +... .+....+ --+.-++-|.++.|
T Consensus 197 ~~~~~iI~De~Y~~~~~~-~~~~-~~~~~~~-~ivi~SfSK~~g~~ 239 (374)
T PRK02610 197 PEDILVVIDEAYFEFSQT-TLVG-ELAQHPN-WVILRTFSKAFRLA 239 (374)
T ss_pred cCCcEEEEeccccccCcc-chHH-HHhcCCC-EEEEEecchhccCc
Confidence 148999999999764211 1111 1111111 13457889988654
No 335
>PRK08354 putative aminotransferase; Provisional
Probab=97.94 E-value=8.1e-05 Score=80.92 Aligned_cols=139 Identities=16% Similarity=0.051 Sum_probs=96.0
Q ss_pred HHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHH
Q psy13453 567 VMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEK 646 (764)
Q Consensus 567 v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~k 646 (764)
+.+++++.+|. ..++|+|+++++...+.+. .+ +..|++.+-+++...+
T Consensus 45 l~~~ia~~~~~------------~I~vt~G~~~al~~~~~~~----~~----------------gd~vlv~~P~y~~~~~ 92 (311)
T PRK08354 45 LEEEFSKLFGE------------PIVITAGITEALYLIGILA----LR----------------DRKVIIPRHTYGEYER 92 (311)
T ss_pred HHHHHHHHHCC------------CEEECCCHHHHHHHHHHhh----CC----------------CCeEEEeCCCcHHHHH
Confidence 45688888762 3689999999875443211 11 1247788899999999
Q ss_pred HHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHHHHHHHhcCCEEEEeccc
Q psy13453 647 SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEELGPICQEYNIWLHVDAAY 723 (764)
Q Consensus 647 Aa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eIa~i~~~~glwLHVDaA~ 723 (764)
+++..|.+++.++ +|++.|++.+.+ +-+|+.+..++.||.+-+ +++|+++|+++|+|+++|-+|
T Consensus 93 ~~~~~g~~~~~~~------~d~~~l~~~~~~-------~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y 159 (311)
T PRK08354 93 VARFFAARIIKGP------NDPEKLEELVER-------NSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAF 159 (311)
T ss_pred HHHHcCCEEeecC------CCHHHHHHhhcC-------CCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcc
Confidence 9999999887653 578888877642 225667788999999865 566777889999999999999
Q ss_pred cccccccchhhhhhcCCCccc-EEEEcCCccCCCC
Q psy13453 724 AGSALLLPEYAHLKRGLEYVD-SFDFNTHKWLLVN 757 (764)
Q Consensus 724 Gg~~l~~~~~r~~l~gie~aD-Sit~d~HK~l~~P 757 (764)
+.+..- .. . ...-. -+.-++-|.++.|
T Consensus 160 ~~f~~~-~~--~----~~~~~vi~~~S~SK~~~l~ 187 (311)
T PRK08354 160 IDFVKK-PE--S----PEGENIIKLRTFTKSYGLP 187 (311)
T ss_pred hhcccc-cc--c----cCCCcEEEEeccHhhcCCc
Confidence 775321 10 0 11112 3346778988755
No 336
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=97.93 E-value=0.00012 Score=80.22 Aligned_cols=151 Identities=11% Similarity=-0.019 Sum_probs=98.8
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
.++.+.+++.+|.++. ..++|+|++++...++.. ... +-+++. +-+....
T Consensus 43 ~~lr~~ia~~~~~~~~---------~I~it~Gs~~~l~~~~~~-----~~~---------------~~vv~~-~P~y~~y 92 (332)
T PRK06425 43 TDIEDQIKIYTQGLKI---------KVLIGPGLTHFIYRLLSY-----INV---------------GNIIIV-EPNFNEY 92 (332)
T ss_pred HHHHHHHHHHhCCCcc---------eEEECCCHHHHHHHHHHH-----hCC---------------CcEEEe-CCChHHH
Confidence 3455677888888763 578999999987665431 111 113444 5667777
Q ss_pred HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHHHHHHHhcCCEEEEec
Q psy13453 645 EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEELGPICQEYNIWLHVDA 721 (764)
Q Consensus 645 ~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eIa~i~~~~glwLHVDa 721 (764)
..+++..|++++.||+++ ..+|++.+++ . .+-+|+.+..++.||.+-+ +.+|+++|+++++|+.+|-
T Consensus 93 ~~~~~~~G~~v~~vp~~~-~~~~~~~l~~----~-----~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE 162 (332)
T PRK06425 93 KGYAFTHGIRISALPFNL-INNNPEILNN----Y-----NFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDE 162 (332)
T ss_pred HHHHHHcCCeEEEEeCCc-ccCcHHHHhh----c-----CCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEec
Confidence 888999999999999975 4456655542 1 2336666789999999754 6777778899999999999
Q ss_pred ccccccccc-chhhhhhcCCCcccE-EEEcCCccCCCC
Q psy13453 722 AYAGSALLL-PEYAHLKRGLEYVDS-FDFNTHKWLLVN 757 (764)
Q Consensus 722 A~Gg~~l~~-~~~r~~l~gie~aDS-it~d~HK~l~~P 757 (764)
+|+-+..-. +........- -.. +.-++.|.++.|
T Consensus 163 ~Y~~~~~~~~~~~~~~~~~~--~~vi~~~SfSK~~~l~ 198 (332)
T PRK06425 163 AFIDFVPNRAEEDVLLNRSY--GNVIIGRSLTKILGIP 198 (332)
T ss_pred chhccccccchhHHHHhccC--CCEEEEeecHHhcCCc
Confidence 998653211 1111111111 123 345889988754
No 337
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=97.92 E-value=0.00018 Score=79.65 Aligned_cols=227 Identities=10% Similarity=-0.005 Sum_probs=135.0
Q ss_pred HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc-cCchhhhc-----CCCceec
Q psy13453 24 SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI-QSLNAPVS-----NGPLKVG 97 (764)
Q Consensus 24 v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i-Dpi~~ia~-----~~wlHVD 97 (764)
..-.|.+.|+.. +.|++|++|.+|+++|+++++++.+ .+.-|-++| +|.+ .+|.+|++ +.-+=.|
T Consensus 170 NPASAam~G~~V---V~V~~~~~G~VDlddLk~k~~~~~A-----alMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~D 240 (496)
T COG1003 170 NPASAAMAGFKV---VVVKCDENGNVDLDDLRAKAEDNLA-----ALMITNPST-LGVFEEDIREICEIVHEAGGQVYYD 240 (496)
T ss_pred ChhhHhhcCceE---EEEecCCCCCccHHHHHHHhcccee-----EEEeccCcc-cccchhhHHHHHHHHHHcCCEEEec
Confidence 345688999988 9999999999999999999997543 223555655 3444 56788776 6666777
Q ss_pred ccc---------------------ccc-cc----------eeeeecC--CCccccc--------cccccccCCcccCCCC
Q psy13453 98 GVL---------------------RRV-YS----------SCLVPRG--QKSLRTT--------VLFHFLFQHWQIPLGR 135 (764)
Q Consensus 98 a~l---------------------~~~-y~----------s~ll~rd--~~~l~~~--------~s~~~d~~d~tle~SR 135 (764)
|+- .|+ || +-+-++. ...|..- |...++.. +++.-++
T Consensus 241 GANlNA~vG~~rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~-~s~g~~~ 319 (496)
T COG1003 241 GANLNAIVGLARPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGK-KSIGVSA 319 (496)
T ss_pred CcchhhhhccccccccccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCC-ccceeec
Confidence 731 111 11 0111110 0001100 00001111 2222233
Q ss_pred ----cccHH-HHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccC
Q psy13453 136 ----RFRAL-KLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISF 210 (764)
Q Consensus 136 ----r~~AL-klWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~ 210 (764)
.+.+| ..|+-++.+|.+|+++..+.++-+|+|++.+|+. .++++-.+.- -|.--+.-+. +... +
T Consensus 320 a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~--~y~~~y~~~~-~~~HE~ild~-r~l~-------~ 388 (496)
T COG1003 320 APYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG--YYPVPYTGEN-RVAHECILDA-RPLK-------K 388 (496)
T ss_pred cccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh--cCccccCCCC-cceeEEEeec-hHhH-------h
Confidence 23334 6699999999999999999999999999999996 6777665542 2221111000 0000 0
Q ss_pred CccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEec-cCCC--CCHHHHHHHHHHHHHHHHHHHccC
Q psy13453 211 GDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAI-CSSQ--TEESDVQLGWNEIRTATEEVLRGK 274 (764)
Q Consensus 211 ~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v-~np~--Tt~e~i~~~l~~l~~~~~~i~~~~ 274 (764)
+...-...+-++|..-|. ...+.-++..+.=++ +-|. -+++++|+|.+.+.++++++.+.+
T Consensus 389 ~~Gv~~~DvAKrLlD~Gf---HaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~~~ 452 (496)
T COG1003 389 ETGVRALDVAKRLLDYGF---HAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADAVP 452 (496)
T ss_pred hcCCcHHHHHHHHHhcCC---CCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 111123467788888886 444444432222111 2332 256999999999999999987765
No 338
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=97.89 E-value=0.00085 Score=75.02 Aligned_cols=220 Identities=9% Similarity=-0.025 Sum_probs=128.1
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEee-CCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYC-GRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatA-GTT~~G~iDpi~~ia~-----~~w 93 (764)
.|.|+..++.+++... +.++ .+|+++|+++|++....+..+.+|.+- -..++|.+.|++++++ ++|
T Consensus 131 ~~~s~~~~~~~~~~~~---~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~ 202 (393)
T TIGR01822 131 NHASIIDGVRLCKAKR---YRYA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDAL 202 (393)
T ss_pred ccHHHHHHHHhcCCce---EEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCE
Confidence 6778888888877544 3332 489999999998754433245554333 3568899999999886 899
Q ss_pred ceecccccccc----c-e------------eeeecCCCcccc---cccc-cc---c-----cCCcccCCCCcccH-HHHH
Q psy13453 94 LKVGGVLRRVY----S-S------------CLVPRGQKSLRT---TVLF-HF---L-----FQHWQIPLGRRFRA-LKLW 143 (764)
Q Consensus 94 lHVDa~l~~~y----~-s------------~ll~rd~~~l~~---~~s~-~~---d-----~~d~tle~SRr~~A-LklW 143 (764)
+++|+.....+ + + ++...-.+.+.. .+-. .. + ...+...++..... ..+.
T Consensus 203 li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~ 282 (393)
T TIGR01822 203 VMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGASGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASI 282 (393)
T ss_pred EEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCCcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHH
Confidence 99999742110 0 0 110000111100 0000 00 0 01223333332221 2334
Q ss_pred HHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHH
Q psy13453 144 MTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRI 223 (764)
Q Consensus 144 atL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L 223 (764)
.+++.+ ++..++.++..++.+++.+.|++. ++++. .+...++.++..+ .....++.++|
T Consensus 283 ~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~~-----------------~~~~~~l~~~L 341 (393)
T TIGR01822 283 KVLEML--EASNELRDRLWANTRYFRERMEAA-GFDIK-PADHPIIPVMLYD-----------------AVLAQRFARRL 341 (393)
T ss_pred HHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC-----------------HHHHHHHHHHH
Confidence 445443 345667778888899999999875 77764 3445566664321 01235788888
Q ss_pred HhcCcEEEEece--e-CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 224 IARKVIYIVKGS--F-QDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 224 ~~~G~~~vs~t~--l-~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
.++|.+...... . .+...+|+++.. .+++++++.+++.|+++.++
T Consensus 342 ~~~gI~v~~~~~~~~~~~~~~iRis~~~-~~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 342 LEEGIYVTGFFYPVVPKGQARIRVQISA-AHTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred HHCCeeEeeeCCCCCCCCCceEEEEECC-CCCHHHHHHHHHHHHHHHHH
Confidence 888854432211 1 234568986554 56799999999999988654
No 339
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.89 E-value=0.00024 Score=80.79 Aligned_cols=178 Identities=15% Similarity=0.026 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+..+.++.+.|++++.-.- ....|+.+|||||..|++.||.....+ +.. .++-+|.....-
T Consensus 84 ~~~~~~la~~l~~~~p~~~---------~~v~f~~sGseA~e~A~klar~~~~~~-~~~---------~r~~ii~~~~~y 144 (423)
T PRK05964 84 HEPAERLAQRLVALTPGGL---------DHVFFSDSGSVAVEVALKMALQYWRNR-GEP---------GRSRFLSLRGGY 144 (423)
T ss_pred CHHHHHHHHHHHHhCCCCC---------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCC---------CCcEEEEEcCCc
Confidence 3455567777888763111 246899999999999999999864322 100 012244455555
Q ss_pred chhHHHHHHhCC----------C--ceEEEecCCC--CcccHHHHHHHHHHhhhcCCCceEEEEee-ccCCccc----cc
Q psy13453 641 NSSVEKSAIIGD----------V--PVRQLRSDDN--GVLRGDALLTAVKEDLAKGLIPCCLIATL-GTTGTCA----FD 701 (764)
Q Consensus 641 H~Sv~kAa~~lG----------l--~v~~Vp~d~~--g~md~~~Le~~I~~~~~~G~~p~~Vvata-GTT~~Ga----iD 701 (764)
|-...-+..+.+ + .+..+|...+ ...++++|++.|.+. +....+|+.-- -....|. -+
T Consensus 145 HG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~---~~~iaavi~Ep~i~~~gG~~~~~~~ 221 (423)
T PRK05964 145 HGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKH---AGEIAAFIVEPLVQGAGGMLFYDPR 221 (423)
T ss_pred CCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhC---CCcEEEEEEecccccCCCcccCCHH
Confidence 543333332221 1 2344544321 223478888888642 22333444432 1233343 34
Q ss_pred cHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 702 NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 702 pl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
.+++|+++|++||+.|++|-++.|.-....-+.....|+ ..|-++++ |+++.. +.+|++
T Consensus 222 ~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v-~pDi~~~~--K~l~gG~~p~~av 281 (423)
T PRK05964 222 YLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGV-SPDIMCLS--KGLTGGYLPLAAT 281 (423)
T ss_pred HHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCC-CCCeeeee--hhhhcCcccceEE
Confidence 599999999999999999999876422111111122344 46777664 998766 455544
No 340
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=97.88 E-value=0.00037 Score=76.75 Aligned_cols=151 Identities=15% Similarity=0.028 Sum_probs=102.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecC
Q psy13453 559 ACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSD 638 (764)
Q Consensus 559 ~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~ 638 (764)
....+.+.+.+|+.+. +.++ ...++|+|+++++..++.+. . .|++.+
T Consensus 57 ~~~~Lr~aia~~~~~~-~~~~---------~~i~it~Ga~~~i~~~~~~~-----d------------------~v~v~~ 103 (335)
T PRK14808 57 PDEELIEKILSYLDTD-FLSK---------NNVSVGNGADEIIYVMMLMF-----D------------------RSVFFP 103 (335)
T ss_pred ChHHHHHHHHHHhCCC-CCCc---------ceEEEcCCHHHHHHHHHHHh-----C------------------cEEECC
Confidence 3444555555555432 1444 35789999999887766532 1 145566
Q ss_pred CcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEE
Q psy13453 639 QSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLH 718 (764)
Q Consensus 639 ~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLH 718 (764)
-++.....+++..|.+++.+|.++++.++... +. .+.+|+.+..++.||.+=+.+++.+++ ++++|+.
T Consensus 104 P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~----~~-------~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii 171 (335)
T PRK14808 104 PTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVN----VG-------EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVA 171 (335)
T ss_pred CCHHHHHHHHHHcCCeEEEecCCCcCCCChhH----cc-------CCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEE
Confidence 78888899999999999999998888766432 11 134777888999999999999999999 5899999
Q ss_pred EeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 719 VDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 719 VDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+|-+|.-+. .......+...++ =-+.-++-|.++.|
T Consensus 172 ~DE~Y~~f~--~~~~~~~~~~~~~-vi~~~S~SK~~~l~ 207 (335)
T PRK14808 172 LDEAYYEFH--GESYVDLLKKYEN-LAVIRTFSKAFSLA 207 (335)
T ss_pred EECchhhhc--CCchHHHHHhCCC-EEEEEechhhccCc
Confidence 999997642 1111122222221 13456889988854
No 341
>PLN02452 phosphoserine transaminase
Probab=97.87 E-value=0.00023 Score=79.43 Aligned_cols=193 Identities=9% Similarity=-0.042 Sum_probs=116.7
Q ss_pred CccccccCCCCCh-HHHHHHHHHHhhccc---C---ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeC
Q psy13453 523 PQFNAYFPTGSSY-PSIVGDMLSGAFGLI---G---FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQS 595 (764)
Q Consensus 523 P~~~~~~~~~~~~-~~~lad~l~~~lN~n---~---~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTs 595 (764)
.|-+.|.+++... ..++..+....+|-+ + ....-++.+.++-.++.+.|.++++.|++| .-.++++
T Consensus 6 ~~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y-------~v~~l~G 78 (365)
T PLN02452 6 GRVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNY-------EVLFLQG 78 (365)
T ss_pred CceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCc-------eEEEEeC
Confidence 3445666665544 456666666655421 1 222357888999999999999999998653 2344557
Q ss_pred ChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh--HHHHHHhCCCceEEEecCCCC---cccHHH
Q psy13453 596 TASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS--VEKSAIIGDVPVRQLRSDDNG---VLRGDA 670 (764)
Q Consensus 596 GgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S--v~kAa~~lGl~v~~Vp~d~~g---~md~~~ 670 (764)
|||.+.-.++.. ..+. .+-+.|++ ..+++ +.+-|..+|...+........ -.++++
T Consensus 79 sgt~~~ea~~~n----l~~~--------------~~~~l~~~-~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~ 139 (365)
T PLN02452 79 GASTQFAAIPLN----LCKP--------------GDKADFVV-TGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSE 139 (365)
T ss_pred ccHHHHHHHHHh----cCCC--------------CCeEEEEE-CCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHH
Confidence 777765443331 1111 01133332 44444 233344456533322222222 356666
Q ss_pred HHHHHHHhhhcCCCceEEEEeeccCCccc-cccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEc
Q psy13453 671 LLTAVKEDLAKGLIPCCLIATLGTTGTCA-FDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFN 749 (764)
Q Consensus 671 Le~~I~~~~~~G~~p~~VvataGTT~~Ga-iDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d 749 (764)
+ +.+ ..+-+|..|...|.+|. +.|++++.+ +.+.||++...+....+--+ + +-+..+
T Consensus 140 ~----~~~----~~~~~v~~~hnETstGv~~~~~~~i~~------~~lvVDa~Ss~g~~pidv~~-----~---~v~~~s 197 (365)
T PLN02452 140 W----ELT----PDAKFVHICANETIHGVEFKDYPDVGN------VPLVADMSSNFLSKPVDVSK-----Y---GVIYAG 197 (365)
T ss_pred c----CCC----CCCcEEEECCCCCCCcEecCcccccCC------CeEEEECCccccCcccCHHH-----c---CEEEEe
Confidence 4 211 12458999999999999 699888753 79999999887766554222 1 334469
Q ss_pred CCccCCCCcCceeeC
Q psy13453 750 THKWLLVNFDCSAMW 764 (764)
Q Consensus 750 ~HK~l~~P~~~g~l~ 764 (764)
.||.++ |.|.|+++
T Consensus 198 aqK~lG-P~Gl~~v~ 211 (365)
T PLN02452 198 AQKNVG-PSGVTIVI 211 (365)
T ss_pred cccccC-CCCeEEEE
Confidence 999886 99999874
No 342
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=97.87 E-value=0.00032 Score=78.88 Aligned_cols=150 Identities=19% Similarity=0.168 Sum_probs=100.5
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|-...+|+ .|++|-|.. ..+.+++|..|+..++.+.. + +...|+
T Consensus 53 gnPt~~~le~----~la~Le~g~-----------~a~~~~SGmaAi~~~l~~ll----~---------------~Gd~iv 98 (386)
T PF01053_consen 53 GNPTVRALEQ----RLAALEGGE-----------DALLFSSGMAAISAALLALL----K---------------PGDHIV 98 (386)
T ss_dssp C-HHHHHHHH----HHHHHHT-S-----------EEEEESSHHHHHHHHHHHHS--------------------TTBEEE
T ss_pred ccccHHHHHH----HHHHhhccc-----------ceeeccchHHHHHHHHHhhc----c---------------cCCceE
Confidence 4566666666 557776542 36778888887766665431 1 111355
Q ss_pred ecCCcchh----HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSS----VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~S----v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...-.. +.+-+...|+.+..++. -|+++|++++++.++ +|.+=..++.+.-+-||++|+++|+
T Consensus 99 ~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~-----~d~~~l~~~l~~~t~------~v~~EspsNP~l~v~Dl~~i~~~a~ 167 (386)
T PF01053_consen 99 ASDDLYGGTYRLLEELLPRFGVEVTFVDP-----TDLEALEAALRPNTK------LVFLESPSNPTLEVPDLEAIAKLAK 167 (386)
T ss_dssp EESSSSHHHHHHHHHCHHHTTSEEEEEST-----TSHHHHHHHHCTTEE------EEEEESSBTTTTB---HHHHHHHHH
T ss_pred ecCCccCcchhhhhhhhcccCcEEEEeCc-----hhHHHHHhhccccce------EEEEEcCCCcccccccHHHHHHHHH
Confidence 55553322 23334457888888765 368999999988543 8888889999999999999999999
Q ss_pred hcC-CEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 712 EYN-IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 712 ~~g-lwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
++| +++.||..|+....+-| .. -| ||-+.-|..|+++..
T Consensus 168 ~~g~~~~vVDnT~atp~~~~p-L~---~G---aDivv~S~TKyl~Gh 207 (386)
T PF01053_consen 168 EHGDILVVVDNTFATPYNQNP-LE---LG---ADIVVHSATKYLSGH 207 (386)
T ss_dssp HTTT-EEEEECTTTHTTTC-G-GG---GT----SEEEEETTTTTTTS
T ss_pred HhCCceEEeeccccceeeecc-Cc---CC---ceEEEeeccccccCC
Confidence 999 99999999998755443 11 13 699999999998744
No 343
>PRK07049 methionine gamma-lyase; Validated
Probab=97.85 E-value=0.00047 Score=78.66 Aligned_cols=155 Identities=17% Similarity=0.130 Sum_probs=104.3
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|-...+|+ .++++.|.+ ..++++||+.++..++.+..+ +...|+
T Consensus 81 ~~Pt~~~Le~----~lA~leg~~-----------~~iv~~sG~~Ai~~~l~al~~-------------------~Gd~Vv 126 (427)
T PRK07049 81 NHPNSEIVED----RLAVYEGAE-----------SAALFSSGMSAIATTLLAFVR-------------------PGDVIL 126 (427)
T ss_pred CCcCHHHHHH----HHHHHhCCC-----------cEEEEccHHHHHHHHHHHHhC-------------------CCCEEE
Confidence 3466666666 556666643 468899999987666543211 112355
Q ss_pred ecCCcchhHHHH----HHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~Sv~kA----a~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
+++-........ +...|++++.++ + + .|+++|++.|.+..++. .+-+|++...++.+|.+-|+++|.++|+
T Consensus 127 ~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~-~--~-~d~~~l~~~l~~~~~~~-~tklv~lesP~NPtg~v~d~~~l~~la~ 201 (427)
T PRK07049 127 HSQPLYGGTETLLAKTFRNFGVGAVGFA-D--G-LSEAAIGAAAEAAAAKG-RVSLILIETPANPTNSLVDVAAVRRVAD 201 (427)
T ss_pred EcCCCcccHHHHHHHHHHhcCcEEEEEe-C--C-CCHHHHHHHHHhhccCC-CceEEEEECCCCCCCcccCHHHHHHHHH
Confidence 565555444333 455788766665 2 2 57888998887643322 3557777789999999999999999998
Q ss_pred h------cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC
Q psy13453 712 E------YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 712 ~------~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~ 756 (764)
+ +++++.||.+|.......| .-. .+|-+.-++.|+++.
T Consensus 202 ~~~~~~~~~~~vvvDety~~~~~~~p----l~~---g~divv~S~SK~~gG 245 (427)
T PRK07049 202 AIEARQGHRPIIACDNTLLGPVFQKP----LEH---GADLSVYSLTKYVGG 245 (427)
T ss_pred HhhhcccCCCEEEEECCccccccCCc----ccc---CCCEEEEcCceeecC
Confidence 8 8999999999877543221 111 368999999999984
No 344
>PRK07179 hypothetical protein; Provisional
Probab=97.84 E-value=0.00041 Score=78.31 Aligned_cols=215 Identities=10% Similarity=0.024 Sum_probs=127.4
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
.|+|+..+++.+|... ++.+ ..|+++|+++|++.. +-+++-.....++|.+-|+++|++ ++++
T Consensus 147 ~h~s~~~~~~~~g~~~-----~~~~---~~d~~~l~~~l~~~~----~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~l 214 (407)
T PRK07179 147 AHMSLWEGVRAAGAQA-----HPFR---HNDVDHLRRQIERHG----PGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVL 214 (407)
T ss_pred cCHHHHHHHHHCCCeE-----EEec---CCCHHHHHHHHHhcC----CeEEEECCCCCCCCccccHHHHHHHHHHcCCEE
Confidence 7899998888887653 3332 359999999997521 123445567789999999999876 8899
Q ss_pred eeccccccc-c---c-eeee-e--cCC-Cccccc----ccc--cc--------cc----CC-cccCCCCc-ccHHHHHHH
Q psy13453 95 KVGGVLRRV-Y---S-SCLV-P--RGQ-KSLRTT----VLF--HF--------LF----QH-WQIPLGRR-FRALKLWMT 145 (764)
Q Consensus 95 HVDa~l~~~-y---~-s~ll-~--rd~-~~l~~~----~s~--~~--------d~----~d-~tle~SRr-~~ALklWat 145 (764)
|+|.+.... + + +++- + ... +.+..+ +.. .+ ++ .. ....++-. ..+..+.++
T Consensus 215 ivDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~~~G~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aa 294 (407)
T PRK07179 215 VVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAGRAGIITCPRELAEYVPFVSYPAIFSSTLLPHEIAGLEAT 294 (407)
T ss_pred EEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhccCeEEEeCHHHHHHHHHhCcCeeeCCCCCHHHHHHHHHH
Confidence 999865211 1 0 0000 0 000 010000 000 00 00 00 01122221 122234455
Q ss_pred HHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHh
Q psy13453 146 LRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIA 225 (764)
Q Consensus 146 L~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~ 225 (764)
++.+ +...++.++..+++++|.+.|++. ++++.+ ..+++.+.+. ...-...+.+.|.+
T Consensus 295 l~~~--~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~--~~~i~~l~~~-----------------~~~~~~~~~~~L~~ 352 (407)
T PRK07179 295 LEVI--ESADDRRARLHANARFLREGLSEL-GYNIRS--ESQIIALETG-----------------SERNTEVLRDALEE 352 (407)
T ss_pred HHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCCC--CCCEEEEEeC-----------------CHHHHHHHHHHHHH
Confidence 5554 223467788889999999999987 777663 3466777532 11112568888989
Q ss_pred cCcEEE---EeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 226 RKVIYI---VKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 226 ~G~~~v---s~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
+|.... ......+...+|+++.. .+++++++.+++.|+++.++
T Consensus 353 ~GI~~~~~~~p~~~~~~~~lRis~~~-~~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 353 RNVFGAVFCAPATPKNRNLIRLSLNA-DLTASDLDRVLEVCREARDE 398 (407)
T ss_pred CCceEeeecCCCCCCCCceEEEEECC-CCCHHHHHHHHHHHHHHHHh
Confidence 997521 11112345789997655 46789999999999987665
No 345
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=97.82 E-value=0.00019 Score=78.01 Aligned_cols=151 Identities=17% Similarity=0.149 Sum_probs=105.0
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 554 WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
....|-...+|+.+ +.|=|- ..++.+++|..|..+|+..--. . ...
T Consensus 58 Ri~NPT~~vlE~Ri----AaLEGG-----------~aa~a~aSG~AA~~~ai~~la~---a----------------GD~ 103 (426)
T COG2873 58 RIMNPTTDVLEERI----AALEGG-----------VAALAVASGQAAITYAILNLAG---A----------------GDN 103 (426)
T ss_pred eccCchHHHHHHHH----HHhhcc-----------hhhhhhccchHHHHHHHHHhcc---C----------------CCe
Confidence 34678888888744 444221 3456788888888888763211 0 112
Q ss_pred EEecCC----cchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHH
Q psy13453 634 AYTSDQ----SNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPI 709 (764)
Q Consensus 634 i~~S~~----aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i 709 (764)
|+.|.. ++.-+......+|+.++.|..++ ++.++++|+++++ +|.+=.=.+.-+.+-||++|++|
T Consensus 104 iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d-----~~~~~~aI~~nTk------avf~EtigNP~~~v~Die~ia~i 172 (426)
T COG2873 104 IVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDD-----PENFEAAIDENTK------AVFAETIGNPGLDVLDIEAIAEI 172 (426)
T ss_pred eEeeccccCchHHHHHHHHHhcCcEEEEeCCCC-----HHHHHHHhCcccc------eEEEEeccCCCccccCHHHHHHH
Confidence 333322 23334445678999999987653 9999999999876 44443334556888999999999
Q ss_pred HHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC
Q psy13453 710 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 710 ~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~ 756 (764)
|+++|++|.||-.++..+++-| .++ .||-|+=|.-||++.
T Consensus 173 Ah~~gvpliVDNT~atpyl~rP-~~h------GADIVvHS~TK~igG 212 (426)
T COG2873 173 AHRHGVPLIVDNTFATPYLCRP-IEH------GADIVVHSATKYIGG 212 (426)
T ss_pred HHHcCCcEEEecCCCcceecch-hhc------CCCEEEEeecccccC
Confidence 9999999999999999744433 332 479999999999874
No 346
>PRK12403 putative aminotransferase; Provisional
Probab=97.81 E-value=0.00088 Score=77.14 Aligned_cols=170 Identities=18% Similarity=0.073 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEE-EecCC
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVA-YTSDQ 639 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi-~~S~~ 639 (764)
+....++.+.|+++++.+- ....|+++|||||..|+++||...... +. ..+.+| .....
T Consensus 97 ~~~~~~lae~L~~~~p~~~---------~~v~f~~SGseA~e~AiklAr~~~~~~-g~----------~~r~~ii~~~~~ 156 (460)
T PRK12403 97 HPAVIELSELLFSLLPGHY---------SHAIYTNSGSEANEVLIRTVRRYWQVL-GK----------PQKKIMIGRWNG 156 (460)
T ss_pred CHHHHHHHHHHHHhCCCCc---------CEEEEeCCcHHHHHHHHHHHHHHHHhh-CC----------CCCcEEEEECCC
Confidence 3445556667777775221 246899999999999999999764221 10 012222 23344
Q ss_pred cchhHHHHHHhCCCc-----------eEEEecCCCC----c--------ccHHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 640 SNSSVEKSAIIGDVP-----------VRQLRSDDNG----V--------LRGDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 640 aH~Sv~kAa~~lGl~-----------v~~Vp~d~~g----~--------md~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
-|-+..-+..+.|.. +..+|..... . .+.++|++.+.+.. ...+.+|+.---...
T Consensus 157 yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~--~~~iaavI~Epv~g~ 234 (460)
T PRK12403 157 YHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELG--AENVAGFVAEPFQGA 234 (460)
T ss_pred cCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhC--CCceEEEEEccccCC
Confidence 576665565554421 3344421100 1 12355666664321 123445555444444
Q ss_pred cccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCC
Q psy13453 697 TCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLL 755 (764)
Q Consensus 697 ~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~ 755 (764)
-|.+-| +++|.++|++||+.|++|-+++|+-....-+....-|++ .|-++ .-|.++
T Consensus 235 gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~-PDiv~--~gK~lg 294 (460)
T PRK12403 235 GGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFE-PDTLS--IAKGLT 294 (460)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCC-CCeEE--Eccccc
Confidence 577767 999999999999999999999875332222222223563 68776 578776
No 347
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=97.80 E-value=0.0014 Score=75.10 Aligned_cols=166 Identities=14% Similarity=0.039 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+....++.+.|++++..+. ....|+.+|||||-.|++.||....+. + +.-+|.....-
T Consensus 116 ~~~~~~lAe~L~~~~p~~~---------~~v~f~~SGsEA~e~AlklAr~~t~~~-g------------r~~ii~~~~~y 173 (442)
T TIGR03372 116 DPLRALLAKTLAALTPGKL---------KYSFFCNSGTESVEAALKLAKAYQSPR-G------------KFTFIAASGAF 173 (442)
T ss_pred CHHHHHHHHHHHHhCCCCc---------CEEEEeCCchHHHHHHHHHHHHHHhhc-C------------CcEEEEECCCc
Confidence 3445567777777763221 236899999999999999999764211 0 01244455555
Q ss_pred chhHHHHHHhCC------------CceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc----HH
Q psy13453 641 NSSVEKSAIIGD------------VPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN----LE 704 (764)
Q Consensus 641 H~Sv~kAa~~lG------------l~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp----l~ 704 (764)
|=...-+..+.| -.+..+|.+ |.+++++.+++....+....+|+.---...-|.+-| ++
T Consensus 174 HG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~-----d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~ 248 (442)
T TIGR03372 174 HGKSLGALSATAKPAFRKPFMPLLPGFHHVAFG-----DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLP 248 (442)
T ss_pred cCCCHHHhhccCCcccCCCCCCCCCCCEEeCCC-----CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHH
Confidence 644333333222 124455543 467888888654444445556665544455677777 99
Q ss_pred HHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC
Q psy13453 705 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 705 eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~ 756 (764)
+|+++|++||+.|++|-++.|+-..-.-+.....|+ ..|-++ .-|.++.
T Consensus 249 ~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt--~gK~lg~ 297 (442)
T TIGR03372 249 AVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGV-QPDILC--LAKALGG 297 (442)
T ss_pred HHHHHHHHcCCEEEEeecccCCCccccchhhhhcCC-CCCeee--ehhhhcC
Confidence 999999999999999999976322111112222355 468666 5787763
No 348
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=97.78 E-value=0.00083 Score=74.91 Aligned_cols=214 Identities=11% Similarity=0.062 Sum_probs=123.3
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
.|.|+..+++++. +. .+.. ...|+++|++.|++....+.++.+ +.+....++|.+-|+++|++ +++
T Consensus 104 ~H~sv~~~~~~~~-~~--~~~~-----~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~ 175 (370)
T PRK05937 104 VHISVVYSLSVIS-GW--HQSF-----RHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAH 175 (370)
T ss_pred hhHHHHHHHHHcC-Cc--eEEe-----cCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCE
Confidence 7999999999875 21 1222 257899999999876543333445 35677889999999999887 889
Q ss_pred ceeccccccc-c---c-eee-eec--CC----Ccccccccc-------ccc--------cCCcccCCCC-cccHHHHHHH
Q psy13453 94 LKVGGVLRRV-Y---S-SCL-VPR--GQ----KSLRTTVLF-------HFL--------FQHWQIPLGR-RFRALKLWMT 145 (764)
Q Consensus 94 lHVDa~l~~~-y---~-s~l-l~r--d~----~~l~~~~s~-------~~d--------~~d~tle~SR-r~~ALklWat 145 (764)
+|||++.... + + ++. ... +. .++...+.. ..+ ...+..+.+- ...++.+.++
T Consensus 176 livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G~~vl~~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aa 255 (370)
T PRK05937 176 LIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMGAALLSSSEVKQDLMLNSPPLRYSTGLPPHLLISIQVA 255 (370)
T ss_pred EEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCceEEEcCHHHHHHHHHhCCCCeecCCCCHHHHHHHHHH
Confidence 9999965321 1 0 000 000 00 000000000 000 0111222221 2223344566
Q ss_pred HHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHh
Q psy13453 146 LRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIA 225 (764)
Q Consensus 146 L~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~ 225 (764)
+..+-.+| ....++..++.++|.+.+.... +. .++.|... .. -...+.+.|.+
T Consensus 256 l~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~-------~~-~~~~i~~~----------------~~--~~~~~~~~L~~ 308 (370)
T PRK05937 256 YDFLSQEG-ELARKQLFRLKEYFAQKFSSAA-------PG-CVQPIFLP----------------GI--SEQELYSKLVE 308 (370)
T ss_pred HHHHHhCc-HHHHHHHHHHHHHHHHhcCCCC-------CC-CEEEEEeC----------------Ch--hHHHHHHHHHH
Confidence 66664444 3455777788888888876421 10 11223321 11 13578888888
Q ss_pred cCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 226 RKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 226 ~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
+|... +........++|++ .+..+|++|++.+++.|+++.+++
T Consensus 309 ~gi~v-~~~~~~~~~~iRis-~~~~~t~edid~l~~~L~~~~~~~ 351 (370)
T PRK05937 309 TGIRV-GVVCFPTGPFLRVN-LHAFNTEDEVDILVSVLATYLEKY 351 (370)
T ss_pred CCeeE-EeeCCCCCCEEEEE-cCCCCCHHHHHHHHHHHHHHHHHh
Confidence 88743 32222334579995 667778999999999999887664
No 349
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=97.77 E-value=0.0015 Score=74.40 Aligned_cols=178 Identities=13% Similarity=0.095 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEe-CChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQ-STASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfT-sGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
+....++.+.|++++..|... ...-.|+ .+|||||-.|++.||... .+ +-+|.....
T Consensus 81 ~~~~~~lae~l~~~~~~~~~~------~~~~~f~~~sGseA~e~AlklAr~~t-gr---------------~~ii~~~~~ 138 (425)
T PRK09264 81 TTAKREFLETFEETILKPRGL------DYKVQFTGPTGTNAVEAALKLARKVT-GR---------------TNIVAFTNG 138 (425)
T ss_pred cHHHHHHHHHHHHhhcCCcCC------CceEEEeCCCHHHHHHHHHHHHHHhc-CC---------------CeEEEECCc
Confidence 345556677777765333210 0123464 799999999999999752 11 113334444
Q ss_pred cchhHHHHHHhC---------CC---ceEEEecCCCC--c-ccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc----
Q psy13453 640 SNSSVEKSAIIG---------DV---PVRQLRSDDNG--V-LRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---- 700 (764)
Q Consensus 640 aH~Sv~kAa~~l---------Gl---~v~~Vp~d~~g--~-md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---- 700 (764)
-|=...-+..+. |. .+..+|..... . =|+++|++.|++.......+.+|+.---....|.+
T Consensus 139 yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~ 218 (425)
T PRK09264 139 FHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASA 218 (425)
T ss_pred cCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCH
Confidence 453332222221 11 35566653211 1 26788888886542211234455544433344543
Q ss_pred ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC-CcCceee
Q psy13453 701 DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV-NFDCSAM 763 (764)
Q Consensus 701 Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~-P~~~g~l 763 (764)
+.+++|+++|++||++|++|-.+.|+-....-+.....|+ ..|-++++ |.++. -+.+|++
T Consensus 219 ~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v-~PDi~t~~--K~l~~~G~pigav 279 (425)
T PRK09264 219 EWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGI-TPDIVTLS--KSISGYGLPMALV 279 (425)
T ss_pred HHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCC-CCCEEEec--cccCCCccceEEE
Confidence 5899999999999999999999987422111111222345 46877774 97754 2334543
No 350
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=97.77 E-value=0.00082 Score=75.76 Aligned_cols=164 Identities=12% Similarity=-0.006 Sum_probs=98.1
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 554 WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
|...+....+-+.+.+++.+. +.++ ...++|+|++++... +. + .+.. .-.
T Consensus 71 Y~p~~g~~~lr~aia~~~~~~-~~~~---------d~I~it~Ga~~al~~-l~-~---l~~~---------------gd~ 120 (402)
T TIGR03542 71 YGPEQGYPFLREAIAENDYRG-RIDP---------EEIFISDGAKCDVFR-LQ-S---LFGS---------------DNT 120 (402)
T ss_pred CCCCCCCHHHHHHHHHHHHhc-CCCH---------HHEEECCCcHHHHHH-HH-H---hcCC---------------CCE
Confidence 433445555656566654321 3443 367899999887654 22 1 1111 113
Q ss_pred EEecCCcchhHHHHHHhCCC-----------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc
Q psy13453 634 AYTSDQSNSSVEKSAIIGDV-----------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN 702 (764)
Q Consensus 634 i~~S~~aH~Sv~kAa~~lGl-----------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp 702 (764)
|++..-++......++..|+ .+..||+++++.++++..+ . ..+-+|+.+..++.||.+=+
T Consensus 121 Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~--------~~~~~i~l~nP~NPTG~~~s 191 (402)
T TIGR03542 121 VAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-E--------PKIDIIYLCSPNNPTGTVLT 191 (402)
T ss_pred EEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc-c--------CCceEEEEeCCCCCCCccCC
Confidence 56666667777888888999 8899998754333333111 0 12336666788999999855
Q ss_pred ---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcc-c-EE-EEcCCccCCCC
Q psy13453 703 ---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYV-D-SF-DFNTHKWLLVN 757 (764)
Q Consensus 703 ---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~a-D-Si-t~d~HK~l~~P 757 (764)
+++|+++|++||+|+++|.+|.-... .+.....+..+... + .| .-++-|.++.|
T Consensus 192 ~~~~~~l~~~a~~~~~~iI~De~y~~~~~-~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~p 251 (402)
T TIGR03542 192 KEQLKELVDYANEHGSLILFDAAYSAFIS-DPSLPHSIFEIPGAKECAIEFRSFSKTAGFT 251 (402)
T ss_pred HHHHHHHHHHHHHcCeEEEEEchhhhhcc-CCCCCcchhhCCCCcccEEEEecCccccCCC
Confidence 88899999999999999999986431 11111111122111 1 22 56888988654
No 351
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=97.76 E-value=0.0014 Score=76.31 Aligned_cols=173 Identities=15% Similarity=0.056 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+..+.++.+.|.+++.-.+ .....|+++|||||..|+++||...... +.. .++-+|.....-
T Consensus 132 ~~~~~~lae~L~~~~~~~~--------~~~v~f~~SGsEA~e~AlKlAr~~~~~~-g~~---------~r~~iI~~~~~y 193 (504)
T PLN02760 132 TKPSLDLAKELLEMFTARK--------MGKVFFTNSGSEANDTQVKLVWYYNNAL-GRP---------NKKKFIARSKSY 193 (504)
T ss_pred cHHHHHHHHHHHhhcCCCC--------CCEEEEeCChHHHHHHHHHHHHHHHHhc-CCC---------CCcEEEEECCCc
Confidence 3445555666666653211 0246789999999999999998753211 100 013356677778
Q ss_pred chhHHHHHHhCCCc------------eEEEecCCCCc-------------ccHHHHHHHHHHhhhcCCCceEEEEeeccC
Q psy13453 641 NSSVEKSAIIGDVP------------VRQLRSDDNGV-------------LRGDALLTAVKEDLAKGLIPCCLIATLGTT 695 (764)
Q Consensus 641 H~Sv~kAa~~lGl~------------v~~Vp~d~~g~-------------md~~~Le~~I~~~~~~G~~p~~VvataGTT 695 (764)
|-+..-+..+.|.. +..++.....+ ...++|++.|.+. .+..+.+|++---..
T Consensus 194 HG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAAvI~EPv~g 271 (504)
T PLN02760 194 HGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKE--GPETIAAFIAEPVMG 271 (504)
T ss_pred cCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhc--CCCceEEEEECCccC
Confidence 87766665544431 23333221111 1235577776432 122344555433334
Q ss_pred Ccccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC
Q psy13453 696 GTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 696 ~~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~ 756 (764)
..|.+-| +++|+++|++||+.|++|-++.|+-...+-+....-|+ ..|-+++ -|.++.
T Consensus 272 ~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv-~PDivtl--gK~lgg 333 (504)
T PLN02760 272 AGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNI-KPDLVSL--AKALSS 333 (504)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCC-CCcEEEe--cccccC
Confidence 4577877 99999999999999999999966533333233333466 3785554 677654
No 352
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=97.76 E-value=0.0011 Score=73.38 Aligned_cols=214 Identities=10% Similarity=-0.011 Sum_probs=128.8
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
.|++..+++.+.|... +.+|. .|++.+++.++... .++.+ +.....+++|.++|++++++ ++|
T Consensus 132 ~~~~~~~~~~~~g~~~---~~~~~-----~d~~~l~~~i~~~~---~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~ 200 (385)
T PRK05958 132 NHASLIDGARLSRARV---RRYPH-----NDVDALEALLAKWR---AGRALIVTESVFSMDGDLAPLAELVALARRHGAW 200 (385)
T ss_pred cCHHHHHHHHhcCCce---EEeCC-----CCHHHHHHHHHhcc---CCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCE
Confidence 6788889999988876 77775 38999999997531 12344 44445678899999999886 899
Q ss_pred ceeccccccc-c---c-eeee---ec-CCC-----cccccccc-------ccc-------c-CCcccCCCC-cccHHHHH
Q psy13453 94 LKVGGVLRRV-Y---S-SCLV---PR-GQK-----SLRTTVLF-------HFL-------F-QHWQIPLGR-RFRALKLW 143 (764)
Q Consensus 94 lHVDa~l~~~-y---~-s~ll---~r-d~~-----~l~~~~s~-------~~d-------~-~d~tle~SR-r~~ALklW 143 (764)
+++|...... + + ++.. .. ... ++...|.. ..+ . ..+...++- ...+..++
T Consensus 201 li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~ 280 (385)
T PRK05958 201 LLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSGAAVLGSETLIDYLINRARPFIFTTALPPAQAAAAR 280 (385)
T ss_pred EEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHH
Confidence 9999975211 1 1 0100 00 001 00100100 000 0 011122222 22233456
Q ss_pred HHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHH
Q psy13453 144 MTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRI 223 (764)
Q Consensus 144 atL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L 223 (764)
++|+.+-.. .++.++..++.+++.+.|++. ++++ .+|..+++.|++. + .....++.++|
T Consensus 281 aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~~~~~~~~~~~----------------~-~~~~~~~~~~l 339 (385)
T PRK05958 281 AALRILRRE--PERRERLAALIARLRAGLRAL-GFQL-MDSQSAIQPLIVG----------------D-NERALALAAAL 339 (385)
T ss_pred HHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCc-CCCCCCEEEEEeC----------------C-HHHHHHHHHHH
Confidence 666655322 567788889999999999975 5664 4567777888642 0 11235788899
Q ss_pred HhcCcEEEEece---eCCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 224 IARKVIYIVKGS---FQDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 224 ~~~G~~~vs~t~---l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
.+.|........ -.+..++|+++ +..+++++++.+++.|+++
T Consensus 340 ~~~gI~v~~~~~~~~~~~~~~lRis~-~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 340 QEQGFWVGAIRPPTVPAGTSRLRITL-TAAHTEADIDRLLEALAEA 384 (385)
T ss_pred HHCCceEecccCCCCCCCCceEEEEe-cCCCCHHHHHHHHHHHHhc
Confidence 888875542111 12456899975 3456799999999988764
No 353
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=97.75 E-value=0.0011 Score=75.54 Aligned_cols=172 Identities=15% Similarity=0.011 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
..+.++.+.|++++. .. .....|+++|||||..|+++||... .+ +-+|.....-|
T Consensus 86 ~~~~~la~~L~~~~~--~~-------~~~v~f~~SGseA~e~AlklAr~~t-gr---------------~~ii~~~~~yH 140 (433)
T PRK08117 86 ESILKLAEELAEITP--GG-------LDCFFFSNSGAEAIEGALKLAKHVT-KR---------------PYIISFTGCFH 140 (433)
T ss_pred HHHHHHHHHHHHhCC--CC-------CCEEEEeCcHHHHHHHHHHHHHHhc-CC---------------CeEEEECCCcC
Confidence 455666667777762 11 0246789999999999999999752 10 22455566667
Q ss_pred hhHHHHHHhCCC-------------ceEEEecCCCCc------------ccHHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 642 SSVEKSAIIGDV-------------PVRQLRSDDNGV------------LRGDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 642 ~Sv~kAa~~lGl-------------~v~~Vp~d~~g~------------md~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
-+..-+..+.+- .+..+|.....+ -+.++|++.+++... +..+.+|+.---...
T Consensus 141 G~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~aavi~Epi~~~ 219 (433)
T PRK08117 141 GRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVT-PEEVAAVIIEPVLGE 219 (433)
T ss_pred CcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccC-CCcEEEEEECCeeCC
Confidence 665544433210 244555432222 156777777764222 223445554444444
Q ss_pred cccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCcee
Q psy13453 697 TCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSA 762 (764)
Q Consensus 697 ~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~ 762 (764)
.|.+-| +++|+++|++||+.|.+|-+|+|.-....-+.....|+ ..|- +.+-|.++.-+.+|+
T Consensus 220 ~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv-~pDi--~t~sK~lg~G~piga 286 (433)
T PRK08117 220 GGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGV-VPDI--MTIAKGIASGLPLSA 286 (433)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCC-CCCE--eehhhhccCCCccee
Confidence 577777 99999999999999999999997322111111111244 2454 466788774344444
No 354
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=97.74 E-value=0.0007 Score=77.80 Aligned_cols=224 Identities=13% Similarity=0.045 Sum_probs=133.7
Q ss_pred eeeHHHHHhhcCCCCCCeEEecCC-CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 21 IYESFKATHSLSGTPDQVRLSGLP-DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 21 ~YSv~KAa~~LGl~~~~v~~Vpvd-~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
|+|.-....+.|+-. .++.-++| +++.+|++++++.+.+. +|.++-+ |...+|.+-|+.++++ +.++
T Consensus 179 Hlthg~~~n~~~~~~-~~~~y~vd~~~g~iD~d~l~~~~~~~-----~plvii~-g~S~~~~~~dl~~i~eia~~~gA~L 251 (493)
T PRK13580 179 HLTHGFRPNISGKMF-HQRSYGVDPDTGLLDYDEIAALAREF-----KPLILVA-GYSAYPRRVNFAKLREIADEVGAVL 251 (493)
T ss_pred eeecCcccchhhhee-eeEecccCcccCccCHHHHHHHHhhc-----CCEEEEe-CccccCCCcCHHHHHHHHHHcCCEE
Confidence 444433344444332 33567777 57999999999999874 5776433 4444466768888775 7889
Q ss_pred eeccccccc---------------cceeeeecCCCccccc---ccc-c------cccCCcccCCCCcccHH-HHHHHHHH
Q psy13453 95 KVGGVLRRV---------------YSSCLVPRGQKSLRTT---VLF-H------FLFQHWQIPLGRRFRAL-KLWMTLRS 148 (764)
Q Consensus 95 HVDa~l~~~---------------y~s~ll~rd~~~l~~~---~s~-~------~d~~d~tle~SRr~~AL-klWatL~~ 148 (764)
.||+++... ++-++...-.+++.+. |-. . .+.....+.++=-.-++ ..=.+++.
T Consensus 252 ~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~GG~I~~~~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e 331 (493)
T PRK13580 252 MVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRGGLVLAKKEYADAVDKGCPLVLGGPLPHVMAAKAVALAE 331 (493)
T ss_pred EEECchhhceeccccchhhcCCCCCCcEEEeCChhhccCCCeEEEEecHHHHHHHhhCCCcccCCCccHHHHHHHHHHHH
Confidence 999965221 1112222222222111 000 0 11122334444422222 22334555
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeC-CCCceeEEEEeeccccccccccccCccCCccHHH-HHHHHHHHhc
Q psy13453 149 YGLKGLQAYLRKHISLAKKFADLVEQDDRFELVC-PPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLN-KAVYDRIIAR 226 (764)
Q Consensus 149 lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~-~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n-~~L~~~L~~~ 226 (764)
+-...+.++.++..+++++|++.+++. ||.++. ..+..+|..... .+..+ ..+.++|.+.
T Consensus 332 ~~~~ef~~y~~~l~~Na~~La~~L~~~-G~~vv~ggTdshIV~V~lg-----------------~~~~~g~~a~~~L~e~ 393 (493)
T PRK13580 332 ARTPEFQKYAQQVVDNARALAEGFLKR-GARLVTGGTDNHLVLIDVT-----------------SFGLTGRQAESALLDA 393 (493)
T ss_pred HhCccHHHHHHHHHHHHHHHHHHHHhc-CCCccCCCCCCCEEEEEeC-----------------CHHHHHHHHHHHHHHC
Confidence 544567888999999999999999984 898874 245677776542 12234 3677788899
Q ss_pred CcEEEEece---e-CC---eeEEEEeccCCCC---CHHHHHHHHHHHHHHHHHH
Q psy13453 227 KVIYIVKGS---F-QD---RLFMRFAICSSQT---EESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 227 G~~~vs~t~---l-~g---~~~LRi~v~np~T---t~e~i~~~l~~l~~~~~~i 270 (764)
|.. ++... . .+ ...||+++.-.++ ++++++.+.+.|.++.+..
T Consensus 394 GI~-vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 394 GIV-TNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred CeE-EccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 863 33221 1 33 5679997665444 6899999999998877643
No 355
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=97.73 E-value=0.00034 Score=77.70 Aligned_cols=210 Identities=12% Similarity=0.042 Sum_probs=125.9
Q ss_pred HHhhcCCCCCCeEEecCCCCCcc-c-HHHHHHHHHHHhhCCCCcEEEEeeCCcccccc-cCchhhhcCCCceecccc---
Q psy13453 27 ATHSLSGTPDQVRLSGLPDSEWL-A-YLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI-QSLNAPVSNGPLKVGGVL--- 100 (764)
Q Consensus 27 Aa~~LGl~~~~v~~Vpvd~~~rm-D-~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i-Dpi~~ia~~~wlHVDa~l--- 100 (764)
-|+-.|+.. +.+++++++.. + ++..+..+++ ++-++..|-..|.+|.+ +++.+. .++.+-|||.-
T Consensus 105 ~a~~~g~~~---~~~~~~~~g~~~~~~~~~~~~~~~-----~~~lV~~~h~~t~tG~~~~~i~~~-~g~~~~VDa~qs~g 175 (355)
T cd00611 105 EAKRYGGVV---VIVAAKEEGKYTKIPDVETWDLAP-----DAAYVHYCSNETIHGVEFDEVPDT-GGVPLVADMSSNIL 175 (355)
T ss_pred HHHhcCCCc---EEEecccccCCCCCCCHhhcCCCC-----CCCEEEEeCCcccccEEcceeccc-CCCeEEEEcccccc
Confidence 456668766 88888765433 5 3333333432 23355578889999998 444443 25677788831
Q ss_pred ---------------cc----ccc-eeeeecCCCccccccccccccCCcc-------cCCCC-cccHHHHHHHHHHccHH
Q psy13453 101 ---------------RR----VYS-SCLVPRGQKSLRTTVLFHFLFQHWQ-------IPLGR-RFRALKLWMTLRSYGLK 152 (764)
Q Consensus 101 ---------------~~----~y~-s~ll~rd~~~l~~~~s~~~d~~d~t-------le~SR-r~~ALklWatL~~lG~e 152 (764)
.| +.+ ++++.+.+. +...-....++.++. .-++= -.....+.++++++=.+
T Consensus 176 ~~~idv~~~~~~~ss~~K~lGP~G~g~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~ 254 (355)
T cd00611 176 SRPIDVSKFGVIYAGAQKNLGPAGVTVVIVRKDL-LGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQ 254 (355)
T ss_pred CCCCCHHHhCEEEeecccccCCCceEEEEECHHH-HhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHc
Confidence 11 122 344444321 111000000111110 01222 22345889999999888
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhcCCCeE-EeCCC--Cc-eeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcC
Q psy13453 153 -GLQAYLRKHISLAKKFADLVEQDDRFE-LVCPP--SM-GLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARK 227 (764)
Q Consensus 153 -Gy~~~i~~~i~lA~~l~~~I~~~p~~e-ll~~P--~l-~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G 227 (764)
|+.++.++..++++++.+.|++.|++. ...+| .. .+++|++. +. .++.+..+.+.+.|
T Consensus 255 gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~----------------~~-~l~~~~~~~~~r~G 317 (355)
T cd00611 255 GGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLG----------------KE-ELEKEFLKEAEAAG 317 (355)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcC----------------Ch-hhhHHHHHHHHHCC
Confidence 799999999999999999999999864 22222 23 46889753 11 34455667778889
Q ss_pred cEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 228 VIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 228 ~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
.. .....+....+|+++ .+.++.+||+.+++.|+++
T Consensus 318 ~~--~~~~~~~~g~vR~S~-~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 318 MI--GLKGHRSVGGIRASI-YNALSLEGVQALADFMKEF 353 (355)
T ss_pred Cc--ccCCCcccCeEEEEc-cCCCCHHHHHHHHHHHHHH
Confidence 84 222222234799976 6666799999999999885
No 356
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=97.72 E-value=0.0006 Score=75.45 Aligned_cols=159 Identities=15% Similarity=0.017 Sum_probs=99.0
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
.+.+.+++.++.+++ ..++|+|++++..+++.+. .. +...|++.+-+.....
T Consensus 69 ~lr~~ia~~~~~~~~---------~I~it~G~~~al~~~~~~~----~~---------------~gd~V~v~~P~y~~~~ 120 (357)
T PRK14809 69 DLTAALADRWDVSPE---------QVWLANGGDGALDYLARAM----LD---------------PGDTVLVPDPGFAYYG 120 (357)
T ss_pred HHHHHHHHHhCCCcc---------eEEECCCHHHHHHHHHHHh----cC---------------CCCEEEEeCCChHHHH
Confidence 455566666677553 5789999999876655432 11 1123455554444455
Q ss_pred HHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc--CCEEEEec
Q psy13453 646 KSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY--NIWLHVDA 721 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~--glwLHVDa 721 (764)
..+...|.+++.+|++. ++.+|.+++++.+. . +-+|+.+..++.||.+-+.+++.++++.. ++|+.+|.
T Consensus 121 ~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~-~------~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De 193 (357)
T PRK14809 121 MSARYHHGEVREYPVSKADDFEQTADTVLDAYD-G------ERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDE 193 (357)
T ss_pred HHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc-C------CcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEec
Confidence 56778899999998853 46778887776542 1 22666678999999998887777777653 79999999
Q ss_pred cccccccccchhhhhhcCCCcccEE-EEcCCccCCCC-cCcee
Q psy13453 722 AYAGSALLLPEYAHLKRGLEYVDSF-DFNTHKWLLVN-FDCSA 762 (764)
Q Consensus 722 A~Gg~~l~~~~~r~~l~gie~aDSi-t~d~HK~l~~P-~~~g~ 762 (764)
+|+.... .+.....+..-+ ..+ .-++-|.++.| +-+|.
T Consensus 194 ~y~~~~~-~~~~~~~~~~~~--~vi~~~SfSK~~~~~GlRiG~ 233 (357)
T PRK14809 194 AYGEFAE-RPSAVALVEERD--DVAVLRTFSKAYGLAGLRLGY 233 (357)
T ss_pred hhhhccC-CchhHHHHhhCC--CEEEEecchhHhcCcchhhee
Confidence 9986432 111111111111 233 45888988754 33443
No 357
>KOG0259|consensus
Probab=97.72 E-value=0.0011 Score=72.36 Aligned_cols=114 Identities=13% Similarity=0.158 Sum_probs=84.4
Q ss_pred CcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHH-HHhCCCceEEEec--CCCCc
Q psy13453 589 GGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKS-AIIGDVPVRQLRS--DDNGV 665 (764)
Q Consensus 589 ~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kA-a~~lGl~v~~Vp~--d~~g~ 665 (764)
.+.++|+|.++|+-+++.+--+ + +--|+++.-. |.+..+ |...|+.||+... +++++
T Consensus 127 ~DV~ltsGC~qAIe~~i~~LA~---p----------------~aNILlPrPG-fp~Y~~~a~~~~lEVR~ydlLPe~~we 186 (447)
T KOG0259|consen 127 DDVVLTSGCSQAIELAISSLAN---P----------------GANILLPRPG-FPLYDTRAIYSGLEVRYYDLLPEKDWE 186 (447)
T ss_pred CceEEeccchHHHHHHHHHhcC---C----------------CCceecCCCC-CchHHHhhhhcCceeEeecccCcccce
Confidence 4678999999998777754211 1 1123333222 223333 6678998887664 57899
Q ss_pred ccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHHHHHHHhcCCEEEEecccccccc
Q psy13453 666 LRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEELGPICQEYNIWLHVDAAYAGSAL 728 (764)
Q Consensus 666 md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~~l 728 (764)
||++.+|+.+++++ +++++.-.++.+|.+ |-|++|+++|+++++.++-|-.|+-.++
T Consensus 187 IDL~~veal~DENT------~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vf 246 (447)
T KOG0259|consen 187 IDLDGVEALADENT------VAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVF 246 (447)
T ss_pred echHHHHHhhccCe------eEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeec
Confidence 99999999998874 477778888888876 7899999999999999999999887554
No 358
>PLN02822 serine palmitoyltransferase
Probab=97.71 E-value=0.0023 Score=74.09 Aligned_cols=231 Identities=11% Similarity=0.021 Sum_probs=137.3
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhC----CCC-cEEEEeeCCcccccccCchhhhc----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKS----FLC-PMCSGYCGRTLHQDIQSLNAPVS---- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~----G~~-p~~VatAGTT~~G~iDpi~~ia~---- 90 (764)
.|||+.+++.+.|-.. +.+|.+ |.+.|++.+++..+. .++ .++|...-..++|.+=|++++.+
T Consensus 202 ~H~s~~~~~~ls~~~~---~~~~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k 273 (481)
T PLN02822 202 VHWGIQNGLYLSRSTI---VYFKHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEK 273 (481)
T ss_pred ccHHHHHHHHHcCCeE---EEECCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHH
Confidence 7899999999987544 777766 456677777654332 122 24455555666999999999886
Q ss_pred -CCCceeccccccc-cc-------eee-ee-cCCCcccccccc------c--------cc-----cCCcccCCCCcccHH
Q psy13453 91 -NGPLKVGGVLRRV-YS-------SCL-VP-RGQKSLRTTVLF------H--------FL-----FQHWQIPLGRRFRAL 140 (764)
Q Consensus 91 -~~wlHVDa~l~~~-y~-------s~l-l~-rd~~~l~~~~s~------~--------~d-----~~d~tle~SRr~~AL 140 (764)
++++-+|-.+... ++ ... +. .+.+....+|+- . .+ ...++...+-. ..
T Consensus 274 ~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~GG~i~g~~~ii~~~~~~~~~~~fsa~lP--p~ 351 (481)
T PLN02822 274 YRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFSASLP--PY 351 (481)
T ss_pred cCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCCeEEEcCHHHHHHHHhcCCceeeccccC--HH
Confidence 8888888765311 11 000 00 011111111110 0 01 11122222222 22
Q ss_pred HHHH---HHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHH
Q psy13453 141 KLWM---TLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNK 217 (764)
Q Consensus 141 klWa---tL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~ 217 (764)
.+.+ +|+.+ +.+.++.++.-++.++|.+.|++.+++.+..++...++.+++... . . ..++..+.-.
T Consensus 352 ~~~Aa~~aL~~l--~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~-~-~-------~~~~~~~~~~ 420 (481)
T PLN02822 352 LASAAITAIDVL--EDNPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKS-T-G-------SAKEDLSLLE 420 (481)
T ss_pred HHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCC-c-c-------cccchHHHHH
Confidence 2233 44433 224678888889999999999998899987777777877776321 0 0 0001123346
Q ss_pred HHHHHHH-hcCcEEEEe--cee---CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 218 AVYDRII-ARKVIYIVK--GSF---QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 218 ~L~~~L~-~~G~~~vs~--t~l---~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
++.++|. +.|.+.... ... +.+..+|+|++.-| ++++|+.+++.|+++...++.
T Consensus 421 ~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~-t~edI~~~~~~l~~~~~~~~~ 480 (481)
T PLN02822 421 HIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGH-TESDILKASESLKRVAASVLK 480 (481)
T ss_pred HHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCC-CHHHHHHHHHHHHHHHHHHhc
Confidence 7888987 678755532 222 12457999866655 799999999999999888764
No 359
>KOG0256|consensus
Probab=97.69 E-value=0.00072 Score=74.38 Aligned_cols=173 Identities=16% Similarity=0.130 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
..+-+++.+.|.+.-|-+..| .+...++|.|+|.+|-+.+-+--+ | ....++..--
T Consensus 124 ~~frqa~A~Fm~~~r~~~v~f-----dP~~~Vv~~G~T~ane~l~fcLad----------p---------gdafLvPtPy 179 (471)
T KOG0256|consen 124 PSFRQAVAEFMERARGNRVKF-----DPERVVVTNGATSANETLMFCLAD----------P---------GDAFLVPTPY 179 (471)
T ss_pred hHHHHHHHHHHHHHhCCCCcc-----CccceEEecccchhhHHHHHHhcC----------C---------CceeeecCCC
Confidence 344555666666666655544 224578999999987554432211 1 1112222222
Q ss_pred chhHHHHHHh-CCCceEEEecC--CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc---cHHHHHHHHHhcC
Q psy13453 641 NSSVEKSAII-GDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD---NLEELGPICQEYN 714 (764)
Q Consensus 641 H~Sv~kAa~~-lGl~v~~Vp~d--~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD---pl~eIa~i~~~~g 714 (764)
-..+.+-+++ .|++++.|.++ ..+++++++||+++++.++.|.+.--|++|-.++..|.+- .+..+.++|.++|
T Consensus 180 Y~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kn 259 (471)
T KOG0256|consen 180 YPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKN 259 (471)
T ss_pred CCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcc
Confidence 2223333333 57788888886 4569999999999999999999999999999999999985 4555667788999
Q ss_pred CEEEEeccccccccccchhhhhhcCCC----ccc--EEEEcCCccCCCC
Q psy13453 715 IWLHVDAAYAGSALLLPEYAHLKRGLE----YVD--SFDFNTHKWLLVN 757 (764)
Q Consensus 715 lwLHVDaA~Gg~~l~~~~~r~~l~gie----~aD--Sit~d~HK~l~~P 757 (764)
+.+.+|--|++...-.++++..+.-.+ .-| -|.++..|=+|.|
T Consensus 260 iHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~Glp 308 (471)
T KOG0256|consen 260 IHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLP 308 (471)
T ss_pred eEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCC
Confidence 999999999998776555543322111 122 4678899988887
No 360
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=97.68 E-value=0.002 Score=71.77 Aligned_cols=220 Identities=9% Similarity=-0.015 Sum_probs=125.2
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEee-CCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYC-GRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatA-GTT~~G~iDpi~~ia~-----~~w 93 (764)
.|+|...+++++|... +.++. +|+++|++.|++....+..+.+|.+- -..++|.+++++++.+ ++|
T Consensus 135 ~~~~~~~~~~~~~~~~---~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~ 206 (397)
T PRK06939 135 NHASIIDGVRLCKAKR---YRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDAL 206 (397)
T ss_pred hhHHHHHHHHhcCCce---EEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCE
Confidence 6788888999988765 66654 58999999998654333334554332 3456899999999876 889
Q ss_pred ceecccccc---cc-ce-ee----eecCCCcc----ccccc---ccc-----c--------cCCcccCCCCcc-cHHHHH
Q psy13453 94 LKVGGVLRR---VY-SS-CL----VPRGQKSL----RTTVL---FHF-----L--------FQHWQIPLGRRF-RALKLW 143 (764)
Q Consensus 94 lHVDa~l~~---~y-~s-~l----l~rd~~~l----~~~~s---~~~-----d--------~~d~tle~SRr~-~ALklW 143 (764)
+++|..... .. +. .. +..+.... ...+. ..+ + ...+...++... .+..+.
T Consensus 207 li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~ 286 (397)
T PRK06939 207 VMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASI 286 (397)
T ss_pred EEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHH
Confidence 999997521 11 00 00 00000000 00110 000 0 011122222211 122334
Q ss_pred HHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHH
Q psy13453 144 MTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRI 223 (764)
Q Consensus 144 atL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L 223 (764)
++++.+- + ..++.++..++.+++.+.|++. ++++. .|....+.+... . ..-..++.++|
T Consensus 287 ~al~~~~-~-~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~-~----------------~~~~~~~~~~L 345 (397)
T PRK06939 287 KVLELLE-E-SDELRDRLWENARYFREGMTAA-GFTLG-PGEHPIIPVMLG-D----------------AKLAQEFADRL 345 (397)
T ss_pred HHHHHHh-c-CHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEEC-C----------------HHHHHHHHHHH
Confidence 4455442 1 2456677778888999999876 56653 344444443321 0 01135788889
Q ss_pred HhcCcEEEEece---eCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 224 IARKVIYIVKGS---FQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 224 ~~~G~~~vs~t~---l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
.++|........ -.+...+|+++...+ ++++++++++.|+++.++
T Consensus 346 ~~~gI~v~~~~~~~~~~~~~~iRi~~~~~~-~~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 346 LEEGVYVIGFSFPVVPKGQARIRTQMSAAH-TKEQLDRAIDAFEKVGKE 393 (397)
T ss_pred HHCCceEeeeCCCCCCCCCceEEEEECCCC-CHHHHHHHHHHHHHHHHH
Confidence 888876543211 123468998765544 588999999999887654
No 361
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=97.68 E-value=0.0018 Score=71.89 Aligned_cols=159 Identities=13% Similarity=-0.002 Sum_probs=101.7
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
.+.+.+++.++.+++ ..++|+|+++++...+.+. .+ ++ .|++.+=+.....
T Consensus 61 ~Lr~aia~~~~v~~~---------~I~it~G~~~~i~~~~~~l----~~---------------g~-~vlv~~P~y~~~~ 111 (360)
T PRK07392 61 ELRLALAQHHQLPPE---------WILPGNGAAELLTWAGREL----AQ---------------LR-AVYLITPAFGDYR 111 (360)
T ss_pred HHHHHHHHHhCcChh---------hEEECCCHHHHHHHHHHHh----CC---------------CC-eEEEECCCcHHHH
Confidence 445555666677653 6789999998876554321 11 12 3556666777788
Q ss_pred HHHHhCCCceEEEecCCCCc-----ccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEe
Q psy13453 646 KSAIIGDVPVRQLRSDDNGV-----LRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVD 720 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~~g~-----md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVD 720 (764)
..+...|++++.||.+.++. .+++++++.. ..+.+++.+..++.||.+=+.++|.++|+++++ +.+|
T Consensus 112 ~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiD 183 (360)
T PRK07392 112 RALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-------TPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVD 183 (360)
T ss_pred HHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-------cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEE
Confidence 88999999999999975443 3455544322 124577778899999999999999999999985 6679
Q ss_pred cccccccccc--chhhhhhcCCCcccEEEEcCCccCCCC-cCcee
Q psy13453 721 AAYAGSALLL--PEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSA 762 (764)
Q Consensus 721 aA~Gg~~l~~--~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~ 762 (764)
-+|..+..-. +.....+..-+++ -+.-++-|.++.| +-+|.
T Consensus 184 E~y~~~~~~~~~~s~~~~~~~~~~v-i~i~S~SK~~~l~GlRiG~ 227 (360)
T PRK07392 184 EAFMDFLPPDAEQSLIPCLAEYPNL-IILRSLTKFYSLPGLRLGY 227 (360)
T ss_pred CchhhhccCccccchHHHhhcCCCE-EEEEechhhhcCCchheee
Confidence 9998654211 0111112211111 3445889988844 33443
No 362
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=97.67 E-value=0.0015 Score=74.28 Aligned_cols=162 Identities=16% Similarity=0.046 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
...++.+.+++.+...+ ..+||.|||+||..|+++||... .+ +-+|.....-|-
T Consensus 89 ~~~~lae~l~~~~~~~~----------~v~~~~sGseA~e~Alk~ar~~~-gr---------------~~ii~~~~~yhG 142 (423)
T TIGR00713 89 AEILLAKEIISRVPSVE----------MVRFVNSGTEATMSAVRLARGYT-GR---------------DKIIKFEGCYHG 142 (423)
T ss_pred HHHHHHHHHHHhCCccc----------EEEEeCCHHHHHHHHHHHHHHhh-CC---------------CEEEEEcCCCCC
Confidence 44556667777664322 46899999999999999998752 11 123444444454
Q ss_pred hHHHHHHhC--C-----------C------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc-
Q psy13453 643 SVEKSAIIG--D-----------V------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN- 702 (764)
Q Consensus 643 Sv~kAa~~l--G-----------l------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp- 702 (764)
...-+.... | + .+..+|- -|+++|++.|++. +..+.+|+...-..++|.+-+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~---~~~~aavi~ep~~~~~G~~~~~ 214 (423)
T TIGR00713 143 HHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPY-----NDLEALEEVFEEY---GEEIAGVIVEPVAGNMGVVPPK 214 (423)
T ss_pred ChhhhhccccCcccccCCCCCCCCCcccccceEEeCC-----CCHHHHHHHHHHc---CCcEEEEEEeCCCCCCCCcCCC
Confidence 322222110 0 0 1122221 1799999998742 123334444322222677755
Q ss_pred ---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCcee
Q psy13453 703 ---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSA 762 (764)
Q Consensus 703 ---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~ 762 (764)
+++|.++|++||++|++|-+|.+. ..-........++ ..|-+ .+-|.++.-+..|+
T Consensus 215 ~~~l~~l~~l~~~~~~llI~DEv~~g~-r~g~~~~~~~~~~-~pDi~--t~sK~l~~G~pig~ 273 (423)
T TIGR00713 215 PEFLAGLRALTEEYGSLLIFDEVMTGF-RVALGGAQEYFGV-EPDLT--TLGKIIGGGLPVGA 273 (423)
T ss_pred HHHHHHHHHHHHHhCCEEEEEcccccc-ccCcchhHHHhCC-Ccchh--hhhhhhcCCCceee
Confidence 899999999999999999999775 3211111112244 24533 46787763233343
No 363
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=97.67 E-value=0.0031 Score=72.26 Aligned_cols=175 Identities=14% Similarity=0.009 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+..+.++.+.|++++.-+. -....|+.+|||||..|+++||... .+ +.++.....-
T Consensus 96 ~~~~~~lAe~L~~~~p~~~--------~~~v~f~~SGsEA~e~AlklAr~~t-gr---------------~~Ii~~~~~y 151 (441)
T PRK05769 96 YEPAVELAERLVEIAPGGF--------EKKVFFTNSGTESNEAAIKIARYHT-GR---------------KYIIAFLGAF 151 (441)
T ss_pred CHHHHHHHHHHHHhCCCCC--------CCEEEECCchHHHHHHHHHHHHHHh-CC---------------CeEEEECCCc
Confidence 4556677888888764211 0246899999999999999999652 11 1234444445
Q ss_pred chhHHHHHHhCC-------------CceEEEecCCCCc-------------ccHHHHHHHHHHhhhcCCCceEEEEeecc
Q psy13453 641 NSSVEKSAIIGD-------------VPVRQLRSDDNGV-------------LRGDALLTAVKEDLAKGLIPCCLIATLGT 694 (764)
Q Consensus 641 H~Sv~kAa~~lG-------------l~v~~Vp~d~~g~-------------md~~~Le~~I~~~~~~G~~p~~VvataGT 694 (764)
|=...-+..+.| -++..+|.....+ -+.+.+++.+.+....+..+.+|+.---.
T Consensus 152 HG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~ 231 (441)
T PRK05769 152 HGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQ 231 (441)
T ss_pred CCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECccc
Confidence 533333333221 1344555422111 12334555332211112345555554444
Q ss_pred CCcccccc----HHHHHHHHHhcCCEEEEeccccccccccchh-hhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 695 TGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEY-AHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 695 T~~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~-r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
...|.+-| +++|.++|++||+.+++|-++.|.-. ..++ ....-|+ ..|-+++. |.++.-+..|++
T Consensus 232 g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr-~G~~~a~~~~gv-~pDivt~~--K~l~~G~p~gav 301 (441)
T PRK05769 232 GEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGR-TGKMFAIEHFGV-EPDIITLA--KAIAGGLPLGAV 301 (441)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCc-ccceehhhccCC-CCCEEEEc--ccccCCcccEEE
Confidence 45677777 99999999999999999999987322 2111 1111255 45877764 776644445543
No 364
>PRK05764 aspartate aminotransferase; Provisional
Probab=97.66 E-value=0.00098 Score=74.56 Aligned_cols=225 Identities=10% Similarity=0.052 Sum_probs=127.8
Q ss_pred eeeHHHHHhhcCCCCCCeEEecCCC--CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc---cCchhhhc-----
Q psy13453 21 IYESFKATHSLSGTPDQVRLSGLPD--SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI---QSLNAPVS----- 90 (764)
Q Consensus 21 ~YSv~KAa~~LGl~~~~v~~Vpvd~--~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i---Dpi~~ia~----- 90 (764)
+..+..+++.+|... +.||++. .+.+|+++|++++++. +-+++-+.++.++|.+ ++++++.+
T Consensus 125 y~~~~~~~~~~g~~~---~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~ 196 (393)
T PRK05764 125 WVSYPEMVKLAGGVP---VFVPTGEENGFKLTVEQLEAAITPK-----TKALILNSPSNPTGAVYSPEELEAIADVAVEH 196 (393)
T ss_pred CcchHHHHHHcCCEE---EEEecCcccCCcCCHHHHHHhhCcc-----ceEEEEECCCCCCCcccCHHHHHHHHHHHHHC
Confidence 456777889999877 8999973 5689999999998642 2355556678889997 55666654
Q ss_pred CCCceeccccccc-c-----cee-----------e-eecCCCccc-ccccccc-----c----cCCcccCCCCcccHHHH
Q psy13453 91 NGPLKVGGVLRRV-Y-----SSC-----------L-VPRGQKSLR-TTVLFHF-----L----FQHWQIPLGRRFRALKL 142 (764)
Q Consensus 91 ~~wlHVDa~l~~~-y-----~s~-----------l-l~rd~~~l~-~~~s~~~-----d----~~d~tle~SRr~~ALkl 142 (764)
++|+.+|.+.... + .+. + +..-.+.+- ..+.+.+ + +..+.-..+-....+..
T Consensus 197 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q 276 (393)
T PRK05764 197 DIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKAMSKLQSHSTSNPTSIAQ 276 (393)
T ss_pred CcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCHHHHHHHHHHHhhcccCCChHHH
Confidence 8899999753211 0 000 0 000000000 0000000 0 00000011112344555
Q ss_pred HHHHHHcc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEE-EeeccccccccccccCccCCccHHHHHH
Q psy13453 143 WMTLRSYG--LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCF-RLKVRFWDKLDNLFGTISFGDNDLNKAV 219 (764)
Q Consensus 143 WatL~~lG--~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~F-ry~P~~~~~~~~~~~~~~~~~d~~n~~L 219 (764)
|++.+.+- .+-+.++.++.-+..+++.+.|++++++.+.. |+-+...| ++.+ ... .... -..++
T Consensus 277 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~g~~~~~~~~~~-~~~---------~~~~--~~~~~ 343 (393)
T PRK05764 277 YAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLECPK-PEGAFYVFPNVSK-LLG---------KSIT--DSLEF 343 (393)
T ss_pred HHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccC-CCcceEEEEeccc-ccc---------cccC--CHHHH
Confidence 66666662 44445555666677888999999988888654 55443333 3321 100 0000 12467
Q ss_pred HHHHHh-cCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 220 YDRIIA-RKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 220 ~~~L~~-~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
.+.+.+ .|..+..........++|++++. ++++++..++.|.++.++
T Consensus 344 ~~~l~~~~gi~v~~g~~f~~~~~vRis~~~---~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 344 AEALLEEAGVAVVPGIAFGAPGYVRLSYAT---SLEDLEEGLERIERFLES 391 (393)
T ss_pred HHHHHHhCCEEEccccccCCCCEEEEEecC---CHHHHHHHHHHHHHHHHh
Confidence 777654 57765544333335789999875 488999999998877643
No 365
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=97.66 E-value=0.0021 Score=71.67 Aligned_cols=239 Identities=13% Similarity=0.087 Sum_probs=152.3
Q ss_pred cccc---ccccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCccccc
Q psy13453 5 SLIP---KLAYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQD 81 (764)
Q Consensus 5 ~~~~---~~~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~ 81 (764)
|+++ +.|-.+.+- +-+=+..-|..+|... +.+.+.-.-.+|+++++++|+++.. .-.+..+-.-|.||+
T Consensus 75 sl~~pgdkVLv~~nG~--FG~R~~~ia~~~g~~v---~~~~~~wg~~v~p~~v~~~L~~~~~---~~~V~~vH~ETSTGv 146 (383)
T COG0075 75 SLVEPGDKVLVVVNGK--FGERFAEIAERYGAEV---VVLEVEWGEAVDPEEVEEALDKDPD---IKAVAVVHNETSTGV 146 (383)
T ss_pred hccCCCCeEEEEeCCh--HHHHHHHHHHHhCCce---EEEeCCCCCCCCHHHHHHHHhcCCC---ccEEEEEeccCcccc
Confidence 4554 336666664 5566788899999888 8888886668999999999996522 113347889999999
Q ss_pred ccCchhhhc------------------CCCceecccc-------ccc-----cc-eeeeecCCCcc--c---c-cccccc
Q psy13453 82 IQSLNAPVS------------------NGPLKVGGVL-------RRV-----YS-SCLVPRGQKSL--R---T-TVLFHF 124 (764)
Q Consensus 82 iDpi~~ia~------------------~~wlHVDa~l-------~~~-----y~-s~ll~rd~~~l--~---~-~~s~~~ 124 (764)
..|+++|++ +.++++|.|. .|+ -| +.+.++++..- . . .|+.+.
T Consensus 147 lnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL 226 (383)
T COG0075 147 LNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDL 226 (383)
T ss_pred cCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecH
Confidence 999999886 3344444442 111 11 34444432110 0 0 111111
Q ss_pred ----ccCCcc--cCCCCcccH-HHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC--c-eeEEEEee
Q psy13453 125 ----LFQHWQ--IPLGRRFRA-LKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS--M-GLVCFRLK 194 (764)
Q Consensus 125 ----d~~d~t--le~SRr~~A-LklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~--l-~iV~Fry~ 194 (764)
.|.+.. ...+=.-.. ..+-.+|+.+=.||+..+++++-.+++++++.+++. ||+++.++. + ++.+|+ .
T Consensus 227 ~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~-~ 304 (383)
T COG0075 227 KKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIK-V 304 (383)
T ss_pred HHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEE-C
Confidence 122111 111112222 377888999999999999999999999999999986 999998542 3 455564 3
Q ss_pred ccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEec--eeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 195 VRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKG--SFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 195 P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t--~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
|.+ .+ ..++...+.++.-..++.. .+. ...+||-.+- ..+..++...+..++.+..++-
T Consensus 305 P~g--------------~~--~~~~~~~~~~~~g~~i~gg~~~l~-gkifRIGhMG-~~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 305 PEG--------------VD--DKKVRRALLKEYGVEIAGGQGPLK-GKIFRIGHMG-NVRPEDVLAALAALEAALRELG 365 (383)
T ss_pred CCC--------------CC--cHHHHHHHHHhCCEEecccccccC-ccEEEEecCc-cCCHHHHHHHHHHHHHHHHHcC
Confidence 432 22 1233445666543333332 222 3689997777 8899999999999988876653
No 366
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=97.65 E-value=0.0027 Score=72.08 Aligned_cols=178 Identities=14% Similarity=0.071 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEE-eCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGII-QSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~Gvf-TsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
+....++.+.|++++..|... .....| +++|||||-.|++.||... .+ +-+|.....
T Consensus 77 ~~~~~~lae~l~~~~~~~~~~------~~~~~f~~~sGseA~e~AlklAr~~t-gr---------------~~ii~~~~~ 134 (412)
T TIGR02407 77 TEAKREFLETFNEIILKPRGL------DYKVQFPGPTGTNAVESALKLARKVT-GR---------------SNVVSFTNA 134 (412)
T ss_pred cHHHHHHHHHHHHhccCccCC------CceEEEeCCCchHHHHHHHHHHhhhc-CC---------------CeEEEECCC
Confidence 455666777888775323210 012346 4899999999999999751 11 123444555
Q ss_pred cchhHHHHHHhCC------------CceEEEecCCCC---cccHHHHHHHHHHhhhcCCCceEEEEeeccCCccc----c
Q psy13453 640 SNSSVEKSAIIGD------------VPVRQLRSDDNG---VLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCA----F 700 (764)
Q Consensus 640 aH~Sv~kAa~~lG------------l~v~~Vp~d~~g---~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Ga----i 700 (764)
-|=...-+..+.| ..+..+|..... .=+++.+++.+++.......+.+|+.---....|. -
T Consensus 135 yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~ 214 (412)
T TIGR02407 135 FHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASD 214 (412)
T ss_pred cCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCH
Confidence 5544333333221 134555543211 12467788888643211123445543322233344 4
Q ss_pred ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC-CcCceee
Q psy13453 701 DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV-NFDCSAM 763 (764)
Q Consensus 701 Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~-P~~~g~l 763 (764)
+-+++|+++|++||++|++|..+.|+-....-+.....++ ..|-++++ |+++. -+.+|++
T Consensus 215 ~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v-~PDi~~~~--K~lg~~G~pigav 275 (412)
T TIGR02407 215 EWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGI-EPDIVCLS--KSISGYGLPLALT 275 (412)
T ss_pred HHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCC-CCCEEEec--hhccCCccceeEE
Confidence 6799999999999999999999986522111112222355 46877665 99864 3445554
No 367
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=97.65 E-value=0.00098 Score=75.33 Aligned_cols=207 Identities=13% Similarity=0.051 Sum_probs=118.3
Q ss_pred eEEecCC-CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceecccccc--cc-----
Q psy13453 38 VRLSGLP-DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGGVLRR--VY----- 104 (764)
Q Consensus 38 v~~Vpvd-~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa~l~~--~y----- 104 (764)
++.+|++ +++.+|+++|+++|++. ++-+++.+ .+.+|..-|+++|++ ++++++|++... .+
T Consensus 140 ~~~~~~~~~~~~~d~~~l~~~i~~~----~~k~v~~~--~~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~ 213 (416)
T PRK00011 140 VVSYGVDEETGLIDYDEVEKLALEH----KPKLIIAG--ASAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHP 213 (416)
T ss_pred EeecCcCcccCCcCHHHHHHHHHhc----CCCEEEEC--CCcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccC
Confidence 3778887 46899999999999753 11133222 245677667888765 889999996311 00
Q ss_pred -----ceeeeecCCCcccc---cccccc--c-------cCCcccCCCCcc-cHHHHHHHHHHccHHHHHHHHHHHHHHHH
Q psy13453 105 -----SSCLVPRGQKSLRT---TVLFHF--L-------FQHWQIPLGRRF-RALKLWMTLRSYGLKGLQAYLRKHISLAK 166 (764)
Q Consensus 105 -----~s~ll~rd~~~l~~---~~s~~~--d-------~~d~tle~SRr~-~ALklWatL~~lG~eGy~~~i~~~i~lA~ 166 (764)
+-+++..-.+.+.+ .+-... + .......++... ....++.++.....+++.+++++..++++
T Consensus 214 ~~~~~~di~~~S~~K~l~g~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~ 293 (416)
T PRK00011 214 SPVPHADVVTTTTHKTLRGPRGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAK 293 (416)
T ss_pred CCCCCCcEEEecCCcCCCCCCceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 01122211122211 000000 0 111111122211 22244566666667788999999999999
Q ss_pred HHHHHHhcCCCeEEeC-CCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEe-cee-----CCe
Q psy13453 167 KFADLVEQDDRFELVC-PPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVK-GSF-----QDR 239 (764)
Q Consensus 167 ~l~~~I~~~p~~ell~-~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~-t~l-----~g~ 239 (764)
++.+.|++. +|++.. .++.+++.+...+. ..+ ...+.+.|.+.|...-.. ..+ ..+
T Consensus 294 ~l~~~L~~~-g~~~~~~~~~~~~~~i~~~~~--------------~~~--~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~ 356 (416)
T PRK00011 294 ALAEALAER-GFRVVSGGTDNHLVLVDLRSK--------------GLT--GKEAEAALEEANITVNKNAVPFDPRSPFVT 356 (416)
T ss_pred HHHHHHHhC-CCeeeecCCCCeEEEEeCccc--------------CCC--HHHHHHHHHHcCcEEccCcCCCCCCCCCCC
Confidence 999999985 788763 23446666654321 111 145788888888753211 011 123
Q ss_pred eEEEEeccC---CCCCHHHHHHHHHHHHHHH
Q psy13453 240 LFMRFAICS---SQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 240 ~~LRi~v~n---p~Tt~e~i~~~l~~l~~~~ 267 (764)
..+|+.... ...+.++++.+++.|+++.
T Consensus 357 ~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~ 387 (416)
T PRK00011 357 SGIRIGTPAITTRGFKEAEMKEIAELIADVL 387 (416)
T ss_pred CceEecCHHHhhcCcCHHHHHHHHHHHHHHH
Confidence 468984321 2346899999999998764
No 368
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=97.63 E-value=0.0007 Score=75.46 Aligned_cols=215 Identities=12% Similarity=0.055 Sum_probs=134.5
Q ss_pred eHHHHHhhcCCCCCCeEEecCCC-CCcccHHHHHH-HHHHHhhCCCCcEEEEeeCCccccccc-CchhhhcCCCceeccc
Q psy13453 23 ESFKATHSLSGTPDQVRLSGLPD-SEWLAYLTLRT-IYESFRKSFLCPMCSGYCGRTLHQDIQ-SLNAPVSNGPLKVGGV 99 (764)
Q Consensus 23 Sv~KAa~~LGl~~~~v~~Vpvd~-~~rmD~~aLe~-~I~~~~~~G~~p~~VatAGTT~~G~iD-pi~~ia~~~wlHVDa~ 99 (764)
-+.+-|+.+|. . ..++++. .+..+..++++ +|+++ .-++.-|--.|.+|+.- ||.++ .+..+-|||.
T Consensus 105 r~~~~a~~~g~-~---~~~~~~~~~g~~~~~~~~~~~l~~~-----~~~V~~th~eTstGv~~~~i~~i-~g~l~vVDav 174 (360)
T PRK05355 105 KAIKEAKKYGE-V---NVAASSEDDGFTYIPPLDEWQLSDD-----AAYVHYTSNETIDGTEFHELPDT-GDVPLVADMS 174 (360)
T ss_pred HHHHHHHHhCC-c---eEEecccccCCCCCCChhhccCCCC-----CCEEEEccCCCcceEecCccccc-CCCcEEEEcC
Confidence 34667777783 2 5566654 67777777766 66542 22445788999999995 89998 5667788883
Q ss_pred c------------------cc----ccc-eeeeecCCCc--cccccccccccC----CcccCCCC-cccHHHHHHHHHHc
Q psy13453 100 L------------------RR----VYS-SCLVPRGQKS--LRTTVLFHFLFQ----HWQIPLGR-RFRALKLWMTLRSY 149 (764)
Q Consensus 100 l------------------~~----~y~-s~ll~rd~~~--l~~~~s~~~d~~----d~tle~SR-r~~ALklWatL~~l 149 (764)
- .| +.+ +++..+++-. +...+....|+. .....++= -.....+-.+|.++
T Consensus 175 ss~g~~~idv~~~d~~~~ssqK~lgP~Glg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i 254 (360)
T PRK05355 175 SDILSRPIDVSKFGLIYAGAQKNIGPAGLTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWL 254 (360)
T ss_pred ccccCccCCHHHccEEEEeccccccCCceEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHH
Confidence 1 11 122 3444443211 111000001111 01111333 22334778889998
Q ss_pred cHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC--c-eeEEEEeeccccccccccccCccCCccHHHHHHHHHHHh
Q psy13453 150 GLK-GLQAYLRKHISLAKKFADLVEQDDRFELVCPPS--M-GLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIA 225 (764)
Q Consensus 150 G~e-Gy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~--l-~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~ 225 (764)
=.+ |+.++.++..++++++.+.+++.+-+..+.++. . .+++|++.. . ....++.+.+.+
T Consensus 255 ~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~----------------~-~~~~~~~~~~~~ 317 (360)
T PRK05355 255 KEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLAD----------------E-ELDKKFLAEAKA 317 (360)
T ss_pred HHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCC----------------h-HHHHHHHHHHHH
Confidence 888 899999999999999999999987444433322 3 579997631 1 223567788888
Q ss_pred cCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 226 RKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 226 ~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
+|..+ ....+....+|+++ .+.++.++|+.+++.|+++.
T Consensus 318 ~Gi~~--~~~~~~~g~vRiS~-~~~nt~eei~~l~~~l~~~~ 356 (360)
T PRK05355 318 AGLVG--LKGHRSVGGMRASI-YNAMPLEGVQALVDFMKEFE 356 (360)
T ss_pred CCCcc--cCCCCccCcEEEEC-CCCCCHHHHHHHHHHHHHHH
Confidence 99864 22222235799987 56667999999999999865
No 369
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=97.62 E-value=0.00074 Score=76.35 Aligned_cols=160 Identities=14% Similarity=0.061 Sum_probs=92.7
Q ss_pred HHHHHHHHHhhcccC-----ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHH
Q psy13453 537 SIVGDMLSGAFGLIG-----FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRK 611 (764)
Q Consensus 537 ~~lad~l~~~lN~n~-----~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~ 611 (764)
..+.+.+...++... ..|........+-+.+.+|+.+..|++-+ ....++|+|+++++.+++.+....
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~-------~~~I~it~Ga~~al~~~~~~l~~~ 120 (416)
T PRK09440 48 DYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNIS-------PQNIALTNGSQSAFFYLFNLFAGR 120 (416)
T ss_pred HHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCC-------hhhEEEccChHHHHHHHHHHHhcc
Confidence 344455554444321 23433334556777788888887775432 235789999999876655432110
Q ss_pred HhhhhccCCCCCccccccCceEEEe-cCCcchhHHHHHHhCC----CceEEEecCC---CCcccHHHHHHHHHHhhhcCC
Q psy13453 612 MINHWQSKNPSLTENDIRNKLVAYT-SDQSNSSVEKSAIIGD----VPVRQLRSDD---NGVLRGDALLTAVKEDLAKGL 683 (764)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~vi~~-S~~aH~Sv~kAa~~lG----l~v~~Vp~d~---~g~md~~~Le~~I~~~~~~G~ 683 (764)
. ..+ +...|++ ..-+......++...| ...+.+++++ ++.+|+++|+ +.+
T Consensus 121 ~-----~~~---------~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~------ 178 (416)
T PRK09440 121 R-----ADG---------SLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDE------ 178 (416)
T ss_pred c-----cCC---------CCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCC------
Confidence 0 000 1112333 1222222333333322 2333444443 3579999987 211
Q ss_pred CceEEEEeeccCCccccc---cHHHHHHHHHhcCCEEEEeccccc
Q psy13453 684 IPCCLIATLGTTGTCAFD---NLEELGPICQEYNIWLHVDAAYAG 725 (764)
Q Consensus 684 ~p~~VvataGTT~~GaiD---pl~eIa~i~~~~glwLHVDaA~Gg 725 (764)
.+.+|+.+..++.||.+= .+++|+++|++|++|+.+|-+|+-
T Consensus 179 ~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~ 223 (416)
T PRK09440 179 DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGP 223 (416)
T ss_pred CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccc
Confidence 244777778889999985 477888899999999999999973
No 370
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=97.60 E-value=0.0025 Score=73.43 Aligned_cols=166 Identities=14% Similarity=0.025 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+....++.+.|++++..+. ....|+.+|||||-.|++.||.....+. +..+|.....-
T Consensus 123 ~~~~~~lae~L~~~~p~~~---------~~v~f~~SGsEAve~AlklAr~~t~~~g-------------r~~ii~~~~~y 180 (459)
T PRK11522 123 DPLRAMLAKTLAALTPGKL---------KYSFFCNSGTESVEAALKLAKAYQSPRG-------------KFTFIATSGAF 180 (459)
T ss_pred CHHHHHHHHHHHHhCCCCC---------CEEEEeCCchHHHHHHHHHHHHHhccCC-------------CcEEEEecCCC
Confidence 3445556667777653211 2468999999999999999997642110 01233344444
Q ss_pred chhHHHHHHhCCC------------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc----HH
Q psy13453 641 NSSVEKSAIIGDV------------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN----LE 704 (764)
Q Consensus 641 H~Sv~kAa~~lGl------------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp----l~ 704 (764)
|=...-+....|- .+..+|.. |.++|++.+++..+.+..+.+|+.---....|.+-| ++
T Consensus 181 HG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~ 255 (459)
T PRK11522 181 HGKSLGALSATAKSTFRKPFMPLLPGFRHVPFG-----NIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLT 255 (459)
T ss_pred CCCcHHHhhhcCCcccccCCCCCCCCCcccCCC-----CHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHH
Confidence 4333323332221 22333332 578899988765434445556665555555677777 99
Q ss_pred HHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC
Q psy13453 705 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 705 eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~ 756 (764)
++.++|++||+.|++|=++.|+-..-.-+.....|+ ..|-+++ -|.++.
T Consensus 256 ~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~--gK~lgg 304 (459)
T PRK11522 256 AVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENV-QPDILCL--AKALGG 304 (459)
T ss_pred HHHHHHHHcCCEEEeccceecCCccchhhhhhccCC-CCCEEEe--chhhhC
Confidence 999999999999999999876322111112222355 4676654 677764
No 371
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=97.60 E-value=0.0021 Score=71.79 Aligned_cols=156 Identities=11% Similarity=0.001 Sum_probs=92.3
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
.++.+.++++++++ ..+|+++||+||..|+++||... .+ +-+|..+..-|-+.
T Consensus 69 ~~la~~l~~~~~~~-----------~v~~~~SGseA~e~Alklar~~~-gr---------------~~Ii~~~~syHG~t 121 (364)
T PRK04013 69 EEMLEELSKWVNYE-----------YVYMGNSGTEAVEAALKFARLYT-GR---------------KEIIAMTNAFHGRT 121 (364)
T ss_pred HHHHHHHHhhcCCC-----------EEEEeCchHHHHHHHHHHHHHHh-CC---------------CEEEEECCccccCc
Confidence 33444556666653 36899999999999999998762 10 12455555556444
Q ss_pred HHHHHhCC-------C-----ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc-c---HHHHHH
Q psy13453 645 EKSAIIGD-------V-----PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD-N---LEELGP 708 (764)
Q Consensus 645 ~kAa~~lG-------l-----~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD-p---l~eIa~ 708 (764)
.-+....+ . .+..+|.+ |++++++.|.+. +.+|+.---....|.+- | +++|.+
T Consensus 122 ~~~ls~~~~~~~~~~~~p~~~~~~~~~~~-----d~~~l~~~i~~~------~aAvivEpi~g~gG~~~~~~~yl~~lr~ 190 (364)
T PRK04013 122 MGALSATWKPKYREDFEPLVPGFKHIPFN-----DVEAAKEAITKE------TAAVIFEPIQGEGGIVPAKEEFVKTLRD 190 (364)
T ss_pred hhhccCCCCcccccCCCCCCCCcEEecCC-----CHHHHHHHhcCC------cEEEEEcCCcCCCCCcCCCHHHHHHHHH
Confidence 33333211 1 23333332 578888887532 33554443333334432 3 999999
Q ss_pred HHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCcee
Q psy13453 709 ICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSA 762 (764)
Q Consensus 709 i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~ 762 (764)
+|++||+.|+.|-++.|. ..-.-+....-|+ ..|-+++ -|.++.-+..|+
T Consensus 191 lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv-~PDiv~~--gK~lggG~P~~a 240 (364)
T PRK04013 191 LTEDVGALLIADEVQSGL-RTGKFLAIEHYKV-EPDIVTM--GKGIGNGVPVSL 240 (364)
T ss_pred HHHHcCCEEEEechhhcC-CCCchhHHHhcCC-CCCEEEe--cccccCCceeEE
Confidence 999999999999998875 3322222222355 4676766 566554344444
No 372
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=97.59 E-value=0.0012 Score=73.51 Aligned_cols=211 Identities=12% Similarity=0.084 Sum_probs=117.4
Q ss_pred HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEE-EeeCCcccccccCchhhhc-----CCCceec
Q psy13453 24 SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCS-GYCGRTLHQDIQSLNAPVS-----NGPLKVG 97 (764)
Q Consensus 24 v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~V-atAGTT~~G~iDpi~~ia~-----~~wlHVD 97 (764)
+.-++++.|..+ +.+++ ++.+|+++++++|.+.++ +++ .+.+..++|.+=|++++++ ++++++|
T Consensus 116 ~~~~~~~~g~~~---v~v~~--~~~~d~~~le~ai~~~t~-----ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD 185 (363)
T TIGR01437 116 VETMVRLGGGKV---VEAGY--ANECSAEQLEAAITEKTA-----AILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVD 185 (363)
T ss_pred hHHHHHhcCCeE---EEEcC--CCCCCHHHHHHhcChhce-----EEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEE
Confidence 455677788777 66665 467999999999987543 333 4455567888878888875 8999999
Q ss_pred cccccc------c-ceeeeecCCCcccccccccc-----ccCC---cc-cCCCCcccH-----HHHHHHHHHccHHHHHH
Q psy13453 98 GVLRRV------Y-SSCLVPRGQKSLRTTVLFHF-----LFQH---WQ-IPLGRRFRA-----LKLWMTLRSYGLKGLQA 156 (764)
Q Consensus 98 a~l~~~------y-~s~ll~rd~~~l~~~~s~~~-----d~~d---~t-le~SRr~~A-----LklWatL~~lG~eGy~~ 156 (764)
++.... + +.++.+.-.+.+..- ...+ +.-+ .. -...|+.+. +.+.+++..+-..|. +
T Consensus 186 ~a~~~~~~~~~~~g~D~~~~S~~K~l~gp-~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~-~ 263 (363)
T TIGR01437 186 AAAEEDLQKYYRLGADLVIYSGAKAIEGP-TSGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGK-E 263 (363)
T ss_pred CCCCCchHHHHHcCCCEEEEeCCcccCCC-ceEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCc-c
Confidence 975311 1 122222222222110 0000 0000 00 011222222 455556655422121 2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEeCCCC-------ceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcE
Q psy13453 157 YLRKHISLAKKFADLVEQDDRFELVCPPS-------MGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVI 229 (764)
Q Consensus 157 ~i~~~i~lA~~l~~~I~~~p~~ell~~P~-------l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~ 229 (764)
.+++..+.++++.+.|++.|+++++.++. ...|.|.... .+.+ -.++.++|.+.|..
T Consensus 264 ~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~--------------~g~~--~~~l~~~L~~~~~~ 327 (363)
T TIGR01437 264 SGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESE--------------LGMT--AADVVQALRQGEPA 327 (363)
T ss_pred cHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccC--------------CCCC--HHHHHHHHhcCCCC
Confidence 33334455668999999999999885432 1223332110 0111 25788899887854
Q ss_pred EEEec--eeCCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 230 YIVKG--SFQDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 230 ~vs~t--~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
++.+. .-++. +|+... .+++++++.+++.|+++
T Consensus 328 I~~r~~~~~~~~--~~l~~~--~~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 328 IYTRGYKANEGI--IEIDPR--SVTGGQLDIIVERIREI 362 (363)
T ss_pred EEEeeeeecCCe--EEEEee--cCCHHHHHHHHHHHHHh
Confidence 44443 33443 444333 25699999999998765
No 373
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=97.58 E-value=0.00046 Score=73.89 Aligned_cols=157 Identities=17% Similarity=0.120 Sum_probs=112.2
Q ss_pred chHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEec
Q psy13453 558 PACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTS 637 (764)
Q Consensus 558 p~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S 637 (764)
+.-..+-..+.+.|+.++|..++ ..+. .++|..|+.-++.|--+..+ ++ .+++|
T Consensus 72 ~~W~~lp~~lgdklApLiGA~~~---------Evvv-~dtts~nl~k~L~aalr~~~---------------~r-~vIv~ 125 (407)
T COG3844 72 ADWFDLPERLGDKLAPLIGARAG---------EVVV-TDTTSINLFKVLAAALRPQE---------------GR-RVIVS 125 (407)
T ss_pred CchhhchhHHHHHhhhhhcCCCC---------ceEE-eCCcchHHHHHHHHHhccCC---------------Cc-eEEee
Confidence 33445777788999999998652 3444 44555666655544332111 12 34556
Q ss_pred CCcchhH-----HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh
Q psy13453 638 DQSNSSV-----EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE 712 (764)
Q Consensus 638 ~~aH~Sv-----~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~ 712 (764)
+..-+-- +--+.++|+. -|-.+.+.|++++++++++.+ +|+.+.-+.-||-.-|+.+|.+++++
T Consensus 126 E~~~fpTdly~a~g~~~~~~~~-----~~~~~~~~P~~~~~~~~dd~A------vV~L~~V~y~TGql~dm~aiT~~AH~ 194 (407)
T COG3844 126 EGDNFPTDLYIAEGLADLLGIG-----YDLEGVIAPRALEEAITDDVA------VVLLSHVNYKTGQLLDMRAITALAHQ 194 (407)
T ss_pred cCCCCCcchhhhcchhhhhccc-----ccceeeeChHHHHHhhccceE------EEEeccccccccceeeHHHHHHHHHh
Confidence 5544332 2224444443 345677889999999999865 89999999999999999999999999
Q ss_pred cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 713 YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 713 ~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+|+...-|=|+.++++...-++. .||.-.++.||+|+.-
T Consensus 195 ~galv~wDLAHsaGavp~~Lh~~------gaDfaigcsyKYLNgG 233 (407)
T COG3844 195 HGALVGWDLAHSAGAVPVDLHAA------GADFAIGCSYKYLNGG 233 (407)
T ss_pred cCceEEeehhcccCCcceeeccc------CCCeeeeeeceeccCC
Confidence 99999999999999887754332 4699999999999763
No 374
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=97.56 E-value=0.004 Score=70.70 Aligned_cols=136 Identities=11% Similarity=0.072 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+.|+++....+ ...|+.+|||||-.|++.||...... +.. + .++.++.....-|
T Consensus 82 ~~~~~la~~L~~~~~~~~----------~v~f~~sGseA~e~AlklAr~~~~~~-g~~-~-------~r~~ii~~~~~yH 142 (408)
T PRK04612 82 APPLKLAEELVTASRFAE----------KVFLCNSGTEANEAAIKLVRKWASSQ-GRP-A-------DKRVIVTFRGSFH 142 (408)
T ss_pred HHHHHHHHHHHhhCCCCC----------EEEEcCchHHHHHHHHHHHHHHHHhh-CCC-C-------CCcEEEEECCCcC
Confidence 444566777777754321 46899999999999999999864221 100 0 0122344455556
Q ss_pred hhHHHHHHhCCC------------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc----cHHH
Q psy13453 642 SSVEKSAIIGDV------------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD----NLEE 705 (764)
Q Consensus 642 ~Sv~kAa~~lGl------------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD----pl~e 705 (764)
=...-+....|- .++.+|.. |+++|++.+.. ..+.+|+..--....|.+. -+.+
T Consensus 143 G~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~~-----~~~aavi~eP~~~~gg~~~~~~~~l~~ 212 (408)
T PRK04612 143 GRTLAAVTATAQPKYQEGYEPLPGGFRYVDFN-----DVEALEAAMAG-----GDVAAVMLEPIQGEGGVMPAAPGFLAR 212 (408)
T ss_pred CccHHHHHhcCCcccccCCCCCCCCceEcCCC-----CHHHHHHhhCC-----CCEEEEEECCccCCCCCcCCCHHHHHH
Confidence 444334333321 12222221 68888888742 2344555443333334443 3999
Q ss_pred HHHHHHhcCCEEEEecccccc
Q psy13453 706 LGPICQEYNIWLHVDAAYAGS 726 (764)
Q Consensus 706 Ia~i~~~~glwLHVDaA~Gg~ 726 (764)
|+++|++||++|++|-+|.|.
T Consensus 213 l~~l~~~~g~llI~DEv~tg~ 233 (408)
T PRK04612 213 VRALCDQHDALLVLDEIQCGM 233 (408)
T ss_pred HHHHHHHcCCEEEEeccccCC
Confidence 999999999999999999873
No 375
>PLN02397 aspartate transaminase
Probab=97.56 E-value=0.0037 Score=71.17 Aligned_cols=92 Identities=23% Similarity=0.213 Sum_probs=75.2
Q ss_pred EEEecCCcchhHHHHHHhCCCceEEEec-C-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHHH
Q psy13453 633 VAYTSDQSNSSVEKSAIIGDVPVRQLRS-D-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEELG 707 (764)
Q Consensus 633 vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~-d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eIa 707 (764)
.|++.+-++......++..|.+++.+|. + +++.+|++.+++.+.+.. ....+++....++.||.+ +.+++|+
T Consensus 144 ~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~---~~~~~i~~~~P~NPTG~v~s~e~l~~i~ 220 (423)
T PLN02397 144 TIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAP---DGSFVLLHACAHNPTGVDPTPEQWEQIS 220 (423)
T ss_pred EEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHH
Confidence 5777777888888889999999999997 3 357899999998886431 235677778889999998 5677788
Q ss_pred HHHHhcCCEEEEeccccccc
Q psy13453 708 PICQEYNIWLHVDAAYAGSA 727 (764)
Q Consensus 708 ~i~~~~glwLHVDaA~Gg~~ 727 (764)
++|++||+|+++|-+|....
T Consensus 221 ~~a~~~~~~vI~De~Y~~l~ 240 (423)
T PLN02397 221 DLIKSKNHLPFFDSAYQGFA 240 (423)
T ss_pred HHHHhCCcEEEEecccCCcc
Confidence 99999999999999998764
No 376
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=97.55 E-value=0.0026 Score=69.80 Aligned_cols=209 Identities=9% Similarity=0.072 Sum_probs=123.2
Q ss_pred eeH-HHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-------CCC
Q psy13453 22 YES-FKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-------NGP 93 (764)
Q Consensus 22 YSv-~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-------~~w 93 (764)
|+. .+++..+|... +.+|+++++.+|+++|++++.+. +-+++-+.++.++|.+=|++++.+ +++
T Consensus 105 y~~~~~~~~~~g~~~---~~~~~~~~~~~d~~~l~~~~~~~-----~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ 176 (346)
T TIGR01141 105 YSMYEISAKIHGAEV---VKVPLDEDGQLDLEDILVAIDDK-----PKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDAL 176 (346)
T ss_pred HHHHHHHHHHcCCeE---EEeccCCCCCCCHHHHHHhcCCC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcE
Confidence 444 45778888887 99999988999999999986432 224555677899999988877654 577
Q ss_pred ceeccccccc-c-----------ceeeeecC-CCccc-ccccccc-----c----cCCcccCCCCcccHHHHHHHHHHcc
Q psy13453 94 LKVGGVLRRV-Y-----------SSCLVPRG-QKSLR-TTVLFHF-----L----FQHWQIPLGRRFRALKLWMTLRSYG 150 (764)
Q Consensus 94 lHVDa~l~~~-y-----------~s~ll~rd-~~~l~-~~~s~~~-----d----~~d~tle~SRr~~ALklWatL~~lG 150 (764)
+.+|.+.... + ...++... .+.+. ..+...+ + +.... ..-....+...++...+-
T Consensus 177 ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~ 254 (346)
T TIGR01141 177 VVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVR--APFNLSRLAQAAAIAALR 254 (346)
T ss_pred EEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhcc--CCCCCCHHHHHHHHHHhC
Confidence 8888863210 0 00111111 11110 0000000 0 00000 000112233333333332
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcE
Q psy13453 151 LK-GLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVI 229 (764)
Q Consensus 151 ~e-Gy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~ 229 (764)
.. .+.++.++..+..+++.+.+++++++++. ++....+.|.+. . + ..++.++|.+.|..
T Consensus 255 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~----------------~-~--~~~~~~~L~~~gI~ 314 (346)
T TIGR01141 255 DDDFIEKTVEEINAERERLYDGLKKLPGLEVY-PSDANFVLIRFP----------------R-D--ADALFEALLEKGII 314 (346)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEEecC----------------C-C--HHHHHHHHHHCCeE
Confidence 22 46777788888899999999998898854 445556666542 1 1 24688888899875
Q ss_pred EEEeceeCC-eeEEEEeccCCCCCHHHHHHHHHHHH
Q psy13453 230 YIVKGSFQD-RLFMRFAICSSQTEESDVQLGWNEIR 264 (764)
Q Consensus 230 ~vs~t~l~g-~~~LRi~v~np~Tt~e~i~~~l~~l~ 264 (764)
........+ ..++|+++. ++++++.+++.|+
T Consensus 315 v~~g~~f~~~~~~iRls~~----~~~~i~~~~~~l~ 346 (346)
T TIGR01141 315 VRDLNSYPGLPNCLRITVG----TREENDRFLAALR 346 (346)
T ss_pred EEeCCCcCCCCCeEEEecC----CHHHHHHHHHHhC
Confidence 544432211 568999854 6788998887763
No 377
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=97.55 E-value=0.0053 Score=70.43 Aligned_cols=173 Identities=15% Similarity=-0.017 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
..+.++.+.|+++++.+. ....|+.+|||||-.|++.||... .+ +.++-....-|
T Consensus 84 ~~~~~la~~L~~~~p~~~---------~~v~f~~sGsEAve~AlklAr~~t-gr---------------~~ii~~~~~yH 138 (443)
T PRK08360 84 VEPLLLAEKLIEIAPGDN---------PKVSFGLSGSDANDGAIKFARAYT-KR---------------RKILSYLRSYY 138 (443)
T ss_pred HHHHHHHHHHHHhCCCCC---------CEEEEcCCHHHHHHHHHHHHHHhc-CC---------------CeEEEEeCCcC
Confidence 445566777888764321 246899999999999999998752 11 11233333344
Q ss_pred hhHHHHHHhCCC------------ceEEEecCCCCc------------ccHHHHHHHHHHhhhcCCCceEEEEeeccCCc
Q psy13453 642 SSVEKSAIIGDV------------PVRQLRSDDNGV------------LRGDALLTAVKEDLAKGLIPCCLIATLGTTGT 697 (764)
Q Consensus 642 ~Sv~kAa~~lGl------------~v~~Vp~d~~g~------------md~~~Le~~I~~~~~~G~~p~~VvataGTT~~ 697 (764)
=...-+..+.|. .+..+|.....+ -+.+.+++.|++.. .+..+.+|++.--...+
T Consensus 139 G~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iAAvi~eP~~~~~ 217 (443)
T PRK08360 139 GSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEV-YAEGVAALFAEPIQGDA 217 (443)
T ss_pred CcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhcc-CCCCeEEEEECCccCCC
Confidence 332223332221 234444332111 12345566664421 12345666665544556
Q ss_pred ccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 698 CAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 698 GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
|.+-+ +++|.++|++||++|.+|-+|.+.-....-+.....|+ ..|-+++ -|.++.-+..|++
T Consensus 218 G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~-~pDiitl--sK~l~~G~pigav 284 (443)
T PRK08360 218 GMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGV-EPDIITL--GKPLGGGLPISAT 284 (443)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCC-CCCEEEe--cccccCCceeEEE
Confidence 76543 99999999999999999999987432221111111245 3576655 8888753444543
No 378
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=97.54 E-value=0.0031 Score=69.21 Aligned_cols=153 Identities=14% Similarity=0.086 Sum_probs=101.9
Q ss_pred HHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccC
Q psy13453 540 GDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSK 619 (764)
Q Consensus 540 ad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~ 619 (764)
.+.+...++...+.|. -....+-..+.+|..+-.+|... +.+.+|++|. +.++..+.+.+...
T Consensus 44 ~~Al~~rvdhGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~-------~e~i~~~p~V----Vpgi~~~I~~~T~~---- 106 (388)
T COG1168 44 IEALRERVDHGVFGYP--YGSDELYAAIAHWFKQRHQWEIK-------PEWIVFVPGV----VPGISLAIRALTKP---- 106 (388)
T ss_pred HHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHhcCCCCC-------cceEEEcCcc----hHhHHHHHHHhCcC----
Confidence 3444444443333333 34455778899999999888653 2456777765 44555555443221
Q ss_pred CCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecC---CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 620 NPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSD---DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 620 ~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d---~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
++.|++ ..-.-+.+.++-...|-++...|.- ..+.||.++||+++.+.+ +-+.+.....+.
T Consensus 107 ----------gd~Vvi-~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~-----vkl~iLCnPHNP 170 (388)
T COG1168 107 ----------GDGVVI-QTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDER-----VKLFILCNPHNP 170 (388)
T ss_pred ----------CCeeEe-cCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCC-----ccEEEEeCCCCC
Confidence 122343 3344555777777778888877763 456789999999997753 236777788899
Q ss_pred cccc---ccHHHHHHHHHhcCCEEEEeccccc
Q psy13453 697 TCAF---DNLEELGPICQEYNIWLHVDAAYAG 725 (764)
Q Consensus 697 ~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg 725 (764)
+|.+ |.|.+|+++|++||+.++.|--|.=
T Consensus 171 ~Grvwt~eeL~~i~elc~kh~v~VISDEIHaD 202 (388)
T COG1168 171 TGRVWTKEELRKIAELCLRHGVRVISDEIHAD 202 (388)
T ss_pred CCccccHHHHHHHHHHHHHcCCEEEeeccccc
Confidence 9987 8999999999999999877776544
No 379
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=97.51 E-value=0.003 Score=72.07 Aligned_cols=164 Identities=15% Similarity=0.042 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+..+.++.+.|.+++.. . ....|+.+|||||..|++.||... .+ +-+|.....-
T Consensus 92 ~~~~~~la~~l~~~~p~-~---------~~v~f~~sGseA~e~AlklAr~~t-gr---------------~~ii~~~~~y 145 (428)
T PRK12389 92 TELEIEFAKMLKEAIPS-L---------EKVRFVNSGTEAVMTTIRVARAYT-GR---------------TKIIKFAGCY 145 (428)
T ss_pred CHHHHHHHHHHHHhCCC-C---------cEEEEeCCHHHHHHHHHHHHHHhh-CC---------------CEEEEECCCc
Confidence 34556677777777631 1 246899999999999999999762 11 1234444445
Q ss_pred chhHHHHHHhCCC-------------------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc
Q psy13453 641 NSSVEKSAIIGDV-------------------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD 701 (764)
Q Consensus 641 H~Sv~kAa~~lGl-------------------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD 701 (764)
|=...-+....|. ++..+|-+ |+++|++.+++.. ..+.+|+.---....|.+-
T Consensus 146 HG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~---~~vaavi~EPv~g~~G~~~ 217 (428)
T PRK12389 146 HGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFN-----DIEALKEALDKWG---DEVAAVLVEPIVGNFGIVE 217 (428)
T ss_pred CCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCC-----CHHHHHHHHHhcC---CcEEEEEEeCCCCCCCCcC
Confidence 5433333322221 12222221 6899999886432 2355665554455568787
Q ss_pred c----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCcee
Q psy13453 702 N----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSA 762 (764)
Q Consensus 702 p----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~ 762 (764)
| +++|.++|++||+.|++|-.+.|+ ....-+....-|+ ..|-+++ -|.++.-+..|+
T Consensus 218 p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv-~PDivt~--gK~lggG~Pi~a 278 (428)
T PRK12389 218 PKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGV-EPDLTAL--GKIIGGGLPIGA 278 (428)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCC-CCCeeee--chhhcCCCceeE
Confidence 7 999999999999999999999886 3221111112355 4676544 566654333443
No 380
>PLN00144 acetylornithine transaminase
Probab=97.50 E-value=0.0032 Score=70.79 Aligned_cols=175 Identities=14% Similarity=0.031 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
..+.++.+.|+++.+.+ ...|+++|||||-.|+++||.....+....+. ..+..++-++.....-|
T Consensus 57 ~~~~~la~~l~~~~~~~-----------~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~---~~~~~r~~ii~~~~~yH 122 (382)
T PLN00144 57 IPQVELAKRLVASSFAD-----------RVFFCNSGTEANEAAIKFARKYQRVRAPDKKD---PAASSATEFVSFSNSFH 122 (382)
T ss_pred HHHHHHHHHHHhcCCCC-----------eEEEeCCcHHHHHHHHHHHHHHHhccCCCCcc---ccccccceEEEECCCcc
Confidence 34455666677765432 36799999999999999999764221100000 00000123455565666
Q ss_pred hhHHHHHHhCCC------------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc--cc--HHH
Q psy13453 642 SSVEKSAIIGDV------------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF--DN--LEE 705 (764)
Q Consensus 642 ~Sv~kAa~~lGl------------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai--Dp--l~e 705 (764)
=...-+..+.+- ++..+|-+ |+++|++.+.. ..+.+|+..--.+..|.+ ++ +++
T Consensus 123 G~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~~-----~~~aavi~eP~q~~gg~~~~~~~~~~~ 192 (382)
T PLN00144 123 GRTLGALALTSKEQYRTPFEPLMPGVTFVEYG-----NLEAARKLIQK-----GKTAAVFVEPVQGEGGIYPATKEFLQG 192 (382)
T ss_pred cccHHHHhcCCCccccccCCCCCCCeEEeCCC-----CHHHHHHhcCC-----CCeEEEEEccccCCCCCccCCHHHHHH
Confidence 544444443332 12333322 68889888742 134444444223332332 45 999
Q ss_pred HHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 706 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 706 Ia~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
|+++|++||++|++|-++.+......-+.....++ ..| .+.+-|.++.-+..|++
T Consensus 193 l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~PD--i~t~sK~l~~G~pig~v 247 (382)
T PLN00144 193 LRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGV-EPD--IMTLAKPLAGGLPIGAV 247 (382)
T ss_pred HHHHHHHcCCEEEEechhhCCCccchHhhhhhcCC-CCC--EEEecccccCCcceEEE
Confidence 99999999999999999987533221122223455 356 55557877644444443
No 381
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=97.50 E-value=0.0023 Score=74.03 Aligned_cols=204 Identities=15% Similarity=0.042 Sum_probs=123.2
Q ss_pred cCC-CCCcccHHHHHHHHHHHhhCCCCc-EEEEeeCCcccccccCchhhhc-----CCCceecccc--------------
Q psy13453 42 GLP-DSEWLAYLTLRTIYESFRKSFLCP-MCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGGVL-------------- 100 (764)
Q Consensus 42 pvd-~~~rmD~~aLe~~I~~~~~~G~~p-~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa~l-------------- 100 (764)
+++ +++.+|+++|++.+.+. .| ++|.+ .+.+|..-|+.++++ +.+++||+++
T Consensus 162 ~~~~~~g~iD~d~Le~~l~~~-----~pklIv~~--~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~ 234 (475)
T PLN03226 162 RLDESTGLIDYDKLEKKAMLF-----RPKLIIAG--ASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPF 234 (475)
T ss_pred eecCCCCCcCHHHHHHHHhhc-----CCeEEEEe--cCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCC
Confidence 444 57899999999999753 23 34432 234566656666554 7899999942
Q ss_pred --------------ccccceeeeecCCCcccc---------cccccccc-CCcccCCCC-cccHHHHHHHHHHccHHHHH
Q psy13453 101 --------------RRVYSSCLVPRGQKSLRT---------TVLFHFLF-QHWQIPLGR-RFRALKLWMTLRSYGLKGLQ 155 (764)
Q Consensus 101 --------------~~~y~s~ll~rd~~~l~~---------~~s~~~d~-~d~tle~SR-r~~ALklWatL~~lG~eGy~ 155 (764)
.-+.++++++++. .... .+....++ ..+.++++= ...+..+.++++.+=..|+.
T Consensus 235 ~~~Div~~t~hK~L~GP~Gg~I~~~~~-~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~ 313 (475)
T PLN03226 235 EYCDVVTTTTHKSLRGPRGGMIFFRKG-PKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFK 313 (475)
T ss_pred CCCeEEEecCcccccCCCceEEEEchh-hcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHH
Confidence 1122345665432 1100 00000111 112344442 23344667888888777888
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEeCC-CCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEec
Q psy13453 156 AYLRKHISLAKKFADLVEQDDRFELVCP-PSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKG 234 (764)
Q Consensus 156 ~~i~~~i~lA~~l~~~I~~~p~~ell~~-P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t 234 (764)
++.++..+++++|++.+++ .+|.++.. .+..++.+.+.|.+. + ..++.+.|.+.|.. ++.+
T Consensus 314 ~~~~~~~~na~~L~~~L~~-~G~~l~~~~t~~hi~lv~~~~~gi--------------~--~~~~~~~L~~~~I~-~nk~ 375 (475)
T PLN03226 314 AYQKQVKANAAALANRLMS-KGYKLVTGGTDNHLVLWDLRPLGL--------------T--GSRVEKVLDLAHIT-LNKN 375 (475)
T ss_pred HHHHHHHHHHHHHHHHHHh-CCCEEEcCCCCCCEEEEEccCCCC--------------C--HHHHHHHHHHCCCE-ECCC
Confidence 8899999999999999998 69999874 234566665543221 1 13566667777763 2222
Q ss_pred eeC------CeeEEEE---eccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 235 SFQ------DRLFMRF---AICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 235 ~l~------g~~~LRi---~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
.+- .+..+|+ .++.-..+++|++++.+.|.++.+...
T Consensus 376 ~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~~~ 421 (475)
T PLN03226 376 AVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTIAL 421 (475)
T ss_pred CCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHHhh
Confidence 211 2356786 125566678999999999988876543
No 382
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=97.49 E-value=0.0017 Score=72.82 Aligned_cols=214 Identities=13% Similarity=0.002 Sum_probs=116.2
Q ss_pred HhhcCCCCCCeEEecCCC---CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceeccc
Q psy13453 28 THSLSGTPDQVRLSGLPD---SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGGV 99 (764)
Q Consensus 28 a~~LGl~~~~v~~Vpvd~---~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa~ 99 (764)
+...|... +.++++. ++.+|+++++++|.+. ++-+++-+-+ .+|...|+++|++ ++++++|+.
T Consensus 127 ~~~~g~~~---~~~~~~~~~~~~~id~~~l~~~i~~~----~~~~v~~~~~--~~~~~~~~~~I~~l~~~~~~~li~D~a 197 (402)
T cd00378 127 VSASGKLF---ESVPYGVDPETGLIDYDALEKMALEF----KPKLIVAGAS--AYPRPIDFKRFREIADEVGAYLLVDMA 197 (402)
T ss_pred ccccceeE---EEecCCcCcccCCcCHHHHHHHHHhC----CCCEEEecCc--ccCCCcCHHHHHHHHHhcCCEEEEEcc
Confidence 44556544 5666642 6899999999999743 1223332222 4567778888875 889999996
Q ss_pred cccc--c----------ceeeeecCCCcccc---cccccc--c-------cCCcccCCCCc-ccHHHHHHHHHHccHHHH
Q psy13453 100 LRRV--Y----------SSCLVPRGQKSLRT---TVLFHF--L-------FQHWQIPLGRR-FRALKLWMTLRSYGLKGL 154 (764)
Q Consensus 100 l~~~--y----------~s~ll~rd~~~l~~---~~s~~~--d-------~~d~tle~SRr-~~ALklWatL~~lG~eGy 154 (764)
.... + ..+++..-.+.+.+ .+-... + .......++-. .....+-.++..+-..++
T Consensus 198 ~~~g~~~~g~~~~~~~~~dv~~~s~sK~l~G~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~ 277 (402)
T cd00378 198 HVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEF 277 (402)
T ss_pred chhhhhhcccCCCcccCCcEEEeccccCCCCCCceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHH
Confidence 4111 1 11111111111110 000000 0 00111111111 111122223443333467
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEeCCC-CceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEe
Q psy13453 155 QAYLRKHISLAKKFADLVEQDDRFELVCPP-SMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVK 233 (764)
Q Consensus 155 ~~~i~~~i~lA~~l~~~I~~~p~~ell~~P-~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~ 233 (764)
.++.++..++++++.+.|++. +|+++..| ....+.++..+.+ .+ ..++.+.|.+.|......
T Consensus 278 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~v~v~~~~~~--------------~~--~~~~~~~l~~~gI~v~~~ 340 (402)
T cd00378 278 KAYAKQVVENAKALAEALKER-GFKVVSGGTDNHLVLVDLRPKG--------------IT--GKAAEDALEEAGITVNKN 340 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCeEeecCCCCeEEEEeCCccC--------------CC--HHHHHHHHHHcCcEEcCC
Confidence 888899999999999999987 88887544 4555555543211 11 135566677778644211
Q ss_pred ---ceeC---CeeEEEEeccCC---CCCHHHHHHHHHHHHHHH
Q psy13453 234 ---GSFQ---DRLFMRFAICSS---QTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 234 ---t~l~---g~~~LRi~v~np---~Tt~e~i~~~l~~l~~~~ 267 (764)
.... +...+|++.... ..+.++++.+++.|+++.
T Consensus 341 ~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~ 383 (402)
T cd00378 341 TLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARAL 383 (402)
T ss_pred cCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 1111 345799976432 357899999999998764
No 383
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=97.49 E-value=0.0018 Score=73.85 Aligned_cols=134 Identities=19% Similarity=0.147 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
...+.++.+++++++... ....||.+||+||..|+++||... .+ +.+|.....-
T Consensus 89 ~~~~~~la~~L~~~~~~~----------~~v~~~~sGseA~e~Aik~a~~~~-g~---------------~~ii~~~~~y 142 (426)
T PRK00062 89 TELEVELAELVIELVPSI----------EMVRMVNSGTEATMSAIRLARGYT-GR---------------DKIIKFEGCY 142 (426)
T ss_pred CHHHHHHHHHHHHhCCCC----------CEEEEecCHHHHHHHHHHHHHHHh-CC---------------CeEEEEcCcc
Confidence 345567778888876311 246899999999999999998752 11 2245555556
Q ss_pred chhHHHHHHhC-------CCc----e-E-----EEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc-
Q psy13453 641 NSSVEKSAIIG-------DVP----V-R-----QLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN- 702 (764)
Q Consensus 641 H~Sv~kAa~~l-------Gl~----v-~-----~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp- 702 (764)
|-...-+.... +.. + + .+.+.. -|+++|++.+++. +..+.+|+.--.....|.+-+
T Consensus 143 HG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~l~~~i~~~---~~~~aaiivEpv~~~~G~~~~~ 216 (426)
T PRK00062 143 HGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPY---NDLEAVEELFEEY---GDEIAAVIVEPVAGNMGVVPPK 216 (426)
T ss_pred CCchhhhhhccCccccccCCCCCCCCCcccccceEEcCC---CCHHHHHHHHHhC---CCcEEEEEEeCCcCCCCCcCCC
Confidence 65432222221 110 0 0 111111 2789999988652 223445555544445687777
Q ss_pred ---HHHHHHHHHhcCCEEEEecccccc
Q psy13453 703 ---LEELGPICQEYNIWLHVDAAYAGS 726 (764)
Q Consensus 703 ---l~eIa~i~~~~glwLHVDaA~Gg~ 726 (764)
+++|.++|++||+++++|-+|.|.
T Consensus 217 ~~~l~~l~~l~~~~~~llI~DEv~~G~ 243 (426)
T PRK00062 217 PGFLEGLRELCDEHGALLIFDEVMTGF 243 (426)
T ss_pred HHHHHHHHHHHHHcCCEEEEeechhcc
Confidence 999999999999999999999865
No 384
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=97.46 E-value=0.0085 Score=68.16 Aligned_cols=173 Identities=14% Similarity=0.000 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
.+.++.+.|++++..+. .....|+.+|||||-.|++.||... .+ +-+|.....-|=
T Consensus 77 ~~~~la~~l~~~~p~~~--------~~~v~f~~sGseA~e~AlklAr~~t-gr---------------~~ii~~~~~yHG 132 (420)
T TIGR00700 77 GYVALAEKLNRIAPGSG--------PKKSVFFNSGAEAVENAVKIARSYT-GR---------------PGVVAFDHGFHG 132 (420)
T ss_pred HHHHHHHHHHHhCCCCC--------CCEEEEeCCcHHHHHHHHHHHHHhc-CC---------------CcEEEECCCcCC
Confidence 34456667777763211 0246899999999999999998752 11 123445555564
Q ss_pred hHHHHHHhCC--------C-----ceEEEecCCCCc-----------ccHHHHHHHHHHhhhcCCCceEEEEeeccCCcc
Q psy13453 643 SVEKSAIIGD--------V-----PVRQLRSDDNGV-----------LRGDALLTAVKEDLAKGLIPCCLIATLGTTGTC 698 (764)
Q Consensus 643 Sv~kAa~~lG--------l-----~v~~Vp~d~~g~-----------md~~~Le~~I~~~~~~G~~p~~VvataGTT~~G 698 (764)
...-+..+.| . .+..+|.....+ -+++.+++.+.... .+....+|++---....|
T Consensus 133 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~Epi~g~~G 211 (420)
T TIGR00700 133 RTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDV-GANNVAALVIEPVQGEGG 211 (420)
T ss_pred CcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhc-CCCcEEEEEECCccCCCC
Confidence 4333333211 1 234444321111 12556777664221 223455665544444456
Q ss_pred cccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 699 AFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 699 aiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
.+-+ +++|+++|++||+||++|-.|.|......-+.....|+ ..|-++ +-|.++.-+..|++
T Consensus 212 ~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~-~pDi~~--lsK~l~~G~pig~v 277 (420)
T TIGR00700 212 FIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGP-EPDLIT--TAKSLADGLPLSGV 277 (420)
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCC-CCCEEE--eeccccCCcceEEE
Confidence 6544 99999999999999999999987533221111111233 467555 67877643444443
No 385
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=97.46 E-value=0.0058 Score=68.81 Aligned_cols=219 Identities=10% Similarity=0.013 Sum_probs=123.5
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
.|.|+..++...|... +.++. .|+++|++.++... .+.+-+++......++|.+-|++++.+ ++++
T Consensus 140 ~h~s~~~~~~~~g~~~---~~~~~-----~d~~~l~~~l~~~~-~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~l 210 (402)
T TIGR01821 140 NHASMIEGIRHSGAEK---FIFRH-----NDVAHLEKLLQSVD-PNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALT 210 (402)
T ss_pred HhHHHHHHHHHcCCeE---EEECC-----CCHHHHHHHHHhcc-CCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEE
Confidence 5777777777776544 44432 37888999887531 112224466778889999999999876 8899
Q ss_pred eeccccc----cccceeeeec-----CCCccccccccc------c-----c---c-----CCcccCCCC-cccHHHHHHH
Q psy13453 95 KVGGVLR----RVYSSCLVPR-----GQKSLRTTVLFH------F-----L---F-----QHWQIPLGR-RFRALKLWMT 145 (764)
Q Consensus 95 HVDa~l~----~~y~s~ll~r-----d~~~l~~~~s~~------~-----d---~-----~d~tle~SR-r~~ALklWat 145 (764)
+||.+.. ..++..+... +......+|+=. + + + ..+....+- ...+....++
T Consensus 211 ivDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~GG~i~~~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aa 290 (402)
T TIGR01821 211 YLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVGGYIAASRKLIDAIRSYAPGFIFTTSLPPAIAAGATAS 290 (402)
T ss_pred EEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCCceeecCHHHHHHHHHhCcCceecCcCCHHHHHHHHHH
Confidence 9999753 1221111110 111111111100 0 0 0 001111111 1112233445
Q ss_pred HHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHh
Q psy13453 146 LRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIA 225 (764)
Q Consensus 146 L~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~ 225 (764)
|+.+-.. .++.++..++++++.+.+++. +++++. +..+++.+... ......++.++|.+
T Consensus 291 L~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~i~~i~~~-----------------~~~~a~~~~~~L~~ 349 (402)
T TIGR01821 291 IRHLKES--QDLRRAHQENVKRLKNLLEAL-GIPVIP-NPSHIVPVIIG-----------------DAALCKKVSDLLLN 349 (402)
T ss_pred HHHhhcC--HHHHHHHHHHHHHHHHHHHHc-CCCcCC-CCCCEEEEEeC-----------------CHHHHHHHHHHHHh
Confidence 5544322 334445568899999999886 777553 45666666431 11123578888875
Q ss_pred c-CcEEEEec--ee-CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 226 R-KVIYIVKG--SF-QDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 226 ~-G~~~vs~t--~l-~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
+ |....... .+ .+...+|+++.- ..++++++.+++.++++.++
T Consensus 350 ~~Gi~v~~~~~p~~~~g~~~lRis~~~-~~t~edi~~~~~~l~~~~~~ 396 (402)
T TIGR01821 350 KHGIYVQPINYPTVPRGTERLRITPTP-AHTDKMIDDLVEALLLVWDR 396 (402)
T ss_pred cCCEEEEeECCCCCCCCCceEEEEeCC-CCCHHHHHHHHHHHHHHHHH
Confidence 4 75433221 12 345689996554 45689999999999888755
No 386
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=97.45 E-value=0.0023 Score=71.01 Aligned_cols=113 Identities=17% Similarity=0.067 Sum_probs=83.1
Q ss_pred CcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCC--ccccccHHHHHHHHHhcCCE
Q psy13453 639 QSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTG--TCAFDNLEELGPICQEYNIW 716 (764)
Q Consensus 639 ~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~--~GaiDpl~eIa~i~~~~glw 716 (764)
-.|+++...++..|.+++.|- ..++-...+++.+|.+..+ ++.-+..++. +|.+ +++++++||+++|++
T Consensus 119 gg~~~v~d~~~~aG~~l~EvG--~tn~t~~~d~~~AIne~ta------~llkV~s~~~~f~~~l-~~~~l~~ia~~~~lp 189 (395)
T COG1921 119 GGAFRVPDIIRLAGAKLVEVG--TTNRTHLKDYELAINENTA------LLLKVHSSNYGFTGML-SEEELVEIAHEKGLP 189 (395)
T ss_pred CCCCChhHHHHHcCCEEEEec--ccCcCCHHHHHHHhccCCe------eEEEEeeccccccccc-cHHHHHHHHHHcCCC
Confidence 689999999999998877654 5677899999999998765 4444444432 2222 678899999999999
Q ss_pred EEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 717 LHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 717 LHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+.||+|-|.-.-.-+..+..++ ..||-+++|+||+|+.|. .|++
T Consensus 190 vivD~aSg~~v~~e~~l~~~la--~GaDLV~~SgdKllgGPq-aGii 233 (395)
T COG1921 190 VIVDLASGALVDKEPDLREALA--LGADLVSFSGDKLLGGPQ-AGII 233 (395)
T ss_pred EEEecCCccccccccchhHHHh--cCCCEEEEecchhcCCCc-cceE
Confidence 9999987763322222232221 246999999999999998 6765
No 387
>PRK06062 hypothetical protein; Provisional
Probab=97.45 E-value=0.0071 Score=69.54 Aligned_cols=166 Identities=10% Similarity=-0.012 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+....++.+.|+++...+- ....|+.+|||||-.|++.||... .+ +-+|.....-
T Consensus 94 ~~~~~~lae~L~~~~p~~~---------~~v~f~~SGsEAve~AlklAr~~t-gr---------------~~ii~~~~~y 148 (451)
T PRK06062 94 NDARSEAARLIAERAPGDL---------SKVFFTNGGADANEHAVRMARLHT-GR---------------PKVLSAYRSY 148 (451)
T ss_pred CHHHHHHHHHHHHhCCCCC---------CEEEEcCChHHHHHHHHHHHHHhh-CC---------------ceEEEEeCCC
Confidence 4455666777777763211 246899999999999999999762 11 1134444444
Q ss_pred chhHHHHHHhCCC-----------ceEEEecCCCCc------cc-------HHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 641 NSSVEKSAIIGDV-----------PVRQLRSDDNGV------LR-------GDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 641 H~Sv~kAa~~lGl-----------~v~~Vp~d~~g~------md-------~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
|=...-+..+.|. .+..++.....+ -| +++|++.|+.. .+..+.+|++---...
T Consensus 149 HG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAaviiEPv~g~ 226 (451)
T PRK06062 149 HGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELE--GPSTIAAILLESVPGT 226 (451)
T ss_pred CCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCC
Confidence 5333333332221 233333221111 12 67788887532 1123445554444444
Q ss_pred cccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC
Q psy13453 697 TCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 697 ~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~ 756 (764)
.|.+-| +++|.++|++||+.|++|-.+.|+-....-+....-|+ ..|-+++ -|.++.
T Consensus 227 gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv-~PDi~t~--gK~lgg 287 (451)
T PRK06062 227 AGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGV-VPDLITF--AKGVNS 287 (451)
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCC-CCCeeee--chhhhc
Confidence 577778 99999999999999999999988433222222223466 5786654 677765
No 388
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=97.44 E-value=0.007 Score=66.62 Aligned_cols=209 Identities=11% Similarity=0.023 Sum_probs=121.9
Q ss_pred eeHH-HHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc------CCCc
Q psy13453 22 YESF-KATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS------NGPL 94 (764)
Q Consensus 22 YSv~-KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~------~~wl 94 (764)
|+.. ..++.+|+.. +.||+++++.+|+++|++. +.+++-+.++.++|.+-|.+++.+ ++|+
T Consensus 111 y~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~---------~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~l 178 (353)
T PRK05387 111 YSFYPVYAGLYGIPY---EEIPLDDDFSIDVEDYLRP---------NGGIIFPNPNAPTGIALPLAEIERILAANPDSVV 178 (353)
T ss_pred HHHHHHHHHHcCCEE---EEeecCCCCCCCHHHHHhc---------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEE
Confidence 4444 4478889877 9999998899999999741 235567778999999988877543 6788
Q ss_pred eeccccccccc--ee--eeecCCCc-ccccccc---------ccccC---------CcccC-CCCcccHHHHHHHHHHcc
Q psy13453 95 KVGGVLRRVYS--SC--LVPRGQKS-LRTTVLF---------HFLFQ---------HWQIP-LGRRFRALKLWMTLRSYG 150 (764)
Q Consensus 95 HVDa~l~~~y~--s~--ll~rd~~~-l~~~~s~---------~~d~~---------d~tle-~SRr~~ALklWatL~~lG 150 (764)
.+|..... |. +. ++-..... .-.+|+- .+-.. ...-. .+-....+..+++...+-
T Consensus 179 ivDe~y~~-~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~ 257 (353)
T PRK05387 179 VIDEAYVD-FGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIE 257 (353)
T ss_pred EEeCcccc-cCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhc
Confidence 88875321 11 00 00000000 0000110 00000 00000 011223444555555553
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcE
Q psy13453 151 -LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVI 229 (764)
Q Consensus 151 -~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~ 229 (764)
.+.+.+..++..+..+++.+.++++ ++++. ++..+.+.++.. ..+ ..++.++|.++|..
T Consensus 258 ~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~----------------~~~--~~~~~~~l~~~gi~ 317 (353)
T PRK05387 258 DEAYFEETRAKVIATRERLVEELEAL-GFEVL-PSKANFVFARHP----------------SHD--AAELAAKLRERGII 317 (353)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCcCcEEEEECC----------------CCC--HHHHHHHHHHCCEE
Confidence 3446677777788888999999987 77753 445554444321 111 24678888888976
Q ss_pred EEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 230 YIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 230 ~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
+.....-....++|+++. ++++++.+++.|+++.
T Consensus 318 v~~~~~~~~~~~iRis~~----~~~~~~~~~~~L~~~~ 351 (353)
T PRK05387 318 VRHFNKPRIDQFLRITIG----TDEEMEALVDALKEIL 351 (353)
T ss_pred EEECCCCCCCCeEEEEeC----CHHHHHHHHHHHHHHh
Confidence 543221123468999886 4589999999988764
No 389
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=97.42 E-value=0.0025 Score=70.55 Aligned_cols=205 Identities=8% Similarity=0.011 Sum_probs=122.1
Q ss_pred eHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-------CCCce
Q psy13453 23 ESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-------NGPLK 95 (764)
Q Consensus 23 Sv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-------~~wlH 95 (764)
....+++..|... +.||+++++++|+++|+++++ . +-+++-+-++-+||.+=+.+++.+ +.++.
T Consensus 111 ~y~~~~~~~G~~~---~~v~~~~~~~~d~~~l~~~~~-~-----~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vi 181 (351)
T PRK01688 111 MYSVSAETIGVEI---RTVPTLDNWQLDLPAIADNLD-G-----VKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVV 181 (351)
T ss_pred HHHHHHHHcCCEE---EEeecCCCCCCCHHHHHHhcc-C-----CcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEE
Confidence 3466789999887 899998889999999999873 1 235545589999999987666443 46788
Q ss_pred eccccc--ccc----------ceeeeecCCCccccccc-----cccccCCc-------ccCCCCcccHHHHHHHHHHc--
Q psy13453 96 VGGVLR--RVY----------SSCLVPRGQKSLRTTVL-----FHFLFQHW-------QIPLGRRFRALKLWMTLRSY-- 149 (764)
Q Consensus 96 VDa~l~--~~y----------~s~ll~rd~~~l~~~~s-----~~~d~~d~-------tle~SRr~~ALklWatL~~l-- 149 (764)
+|.+.. ... ...+..|. +...|. ..+-+++. .....-....+..-++...+
T Consensus 182 vDEay~~f~~~~s~~~~~~~~~n~iv~rS---fSK~~glaGlRiGy~i~~~~~i~~l~~~~~~~~v~~~~~~~a~~~L~~ 258 (351)
T PRK01688 182 ADEAYIEFCPQASLAGWLAEYPHLVILRT---LSKAFALAGLRCGFTLANEEVINLLLKVIAPYPLSTPVADIAAQALSP 258 (351)
T ss_pred EECchhhcCCCCChHHHHhhCCCEEEEec---chHhhcCHHHHHhHHhCCHHHHHHHHhccCCCCCCHHHHHHHHHHHhc
Confidence 888631 110 01111111 001110 00100000 00000011122222222232
Q ss_pred -cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCc
Q psy13453 150 -GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKV 228 (764)
Q Consensus 150 -G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~ 228 (764)
+.+-+.+.++...+..+++.+.|++.++++.+.++..+-+.+++. + ..++.++|.++|.
T Consensus 259 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~----------------~----~~~l~~~L~~~gi 318 (351)
T PRK01688 259 QGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT----------------A----SSAVFKSLWDQGI 318 (351)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC----------------C----HHHHHHHHHHCCe
Confidence 345567777777788889999999988886566666665555431 0 1468888999998
Q ss_pred EEEEecee-CCeeEEEEeccCCCCCHHHHHHHHHHH
Q psy13453 229 IYIVKGSF-QDRLFMRFAICSSQTEESDVQLGWNEI 263 (764)
Q Consensus 229 ~~vs~t~l-~g~~~LRi~v~np~Tt~e~i~~~l~~l 263 (764)
.+...... ....++|+++. ++++.+.+++.|
T Consensus 319 ~vr~~~~~~~~~~~iRis~~----~~~e~~~l~~al 350 (351)
T PRK01688 319 ILRDQNKQPGLSNCLRITIG----TREECQRVIDAL 350 (351)
T ss_pred EEEECCCcCCCCCeEEEeCC----CHHHHHHHHHhh
Confidence 66544322 22468999887 468888888876
No 390
>PRK10534 L-threonine aldolase; Provisional
Probab=97.42 E-value=0.0021 Score=70.23 Aligned_cols=197 Identities=13% Similarity=0.054 Sum_probs=107.0
Q ss_pred EEecCCCCCcccHHHHHHHHHHHhhCCCCc-EE-EEeeCCcccccccCchhhhc--------CCCceeccccc--cc-c-
Q psy13453 39 RLSGLPDSEWLAYLTLRTIYESFRKSFLCP-MC-SGYCGRTLHQDIQSLNAPVS--------NGPLKVGGVLR--RV-Y- 104 (764)
Q Consensus 39 ~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p-~~-VatAGTT~~G~iDpi~~ia~--------~~wlHVDa~l~--~~-y- 104 (764)
+.+++++++++|+++|+++|.++...+..+ ++ +.+ .++|++-|.+++.+ ++|++||.+.. .. +
T Consensus 101 ~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~n---p~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~ 177 (333)
T PRK10534 101 QPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLEN---THNGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAY 177 (333)
T ss_pred EeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEec---CCCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHc
Confidence 677778889999999999996532211112 33 453 44599988877542 78999998521 00 0
Q ss_pred c-eee-eecCCCccccccccccccCC-cc--cCCCC----cccHHH-HH-------HHHHHccHHHH---HHHHHHHHHH
Q psy13453 105 S-SCL-VPRGQKSLRTTVLFHFLFQH-WQ--IPLGR----RFRALK-LW-------MTLRSYGLKGL---QAYLRKHISL 164 (764)
Q Consensus 105 ~-s~l-l~rd~~~l~~~~s~~~d~~d-~t--le~SR----r~~ALk-lW-------atL~~lG~eGy---~~~i~~~i~l 164 (764)
. ... +.+..+.+..+|+= .|+. .+ +-++. +...++ .| ......|...+ .+.+++..+.
T Consensus 178 ~~~~~~~~~~~~~~~~s~SK--~~~~~~G~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~ 255 (333)
T PRK10534 178 GCELKEITQYCDSFTICLSK--GLGTPVGSLLVGNRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHNVARLQEDHDN 255 (333)
T ss_pred CCCHHHHHhcCCEEEEEeEc--CCCCcccceEEcCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 0 000 00000000001110 0110 00 00011 000000 01 01122233333 3556666677
Q ss_pred HHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEE
Q psy13453 165 AKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRF 244 (764)
Q Consensus 165 A~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi 244 (764)
.+++.+.|++. ++++. +|+.+.+.+++.+ . -..++.+.|.++|+.... + ..+|+
T Consensus 256 r~~l~~~L~~~-g~~~~-~~~~nfv~~~~~~----------------~--~~~~~~~~l~~~gi~v~~-----~-~~~rl 309 (333)
T PRK10534 256 AAWLAEQLREA-GADVM-RQDTNMLFVRVGE----------------E--QAAALGEYMRERNVLINA-----S-PIVRL 309 (333)
T ss_pred HHHHHHHHHhC-CCccC-CCCceEEEEECCc----------------h--hHHHHHHHHHHcCeeecC-----C-ceEEE
Confidence 78999999986 78754 5677766666421 0 124677899999986422 1 24788
Q ss_pred eccCCCCCHHHHHHHHHHHHHHH
Q psy13453 245 AICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 245 ~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
+. +.++++++++.+++.+++..
T Consensus 310 ~~-~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 310 VT-HLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred EE-EeCCCHHHHHHHHHHHHHHh
Confidence 65 55678999999999998653
No 391
>PRK05957 aspartate aminotransferase; Provisional
Probab=97.41 E-value=0.0063 Score=68.30 Aligned_cols=223 Identities=13% Similarity=0.088 Sum_probs=125.9
Q ss_pred eHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc-----CCCc
Q psy13453 23 ESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS-----NGPL 94 (764)
Q Consensus 23 Sv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~-----~~wl 94 (764)
....+++..|+.. +.||+++++.+|+++|+++|++. +-+++-+-+..++|.+=| +.++++ ++++
T Consensus 125 ~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~i~~~-----~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~l 196 (389)
T PRK05957 125 NHEMAITMAGCQP---ILVPTDDNYQLQPEAIEQAITPK-----TRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYH 196 (389)
T ss_pred CHHHHHHhcCCEE---EEeecCCCCCcCHHHHHHhcCcC-----ceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEE
Confidence 4455677888876 89999988999999999998642 225555568999998876 555543 7788
Q ss_pred eeccccccc-cc-----eee-eecCCCcc--ccccccccccCCcccC------------------CCCcccHHHHHHHHH
Q psy13453 95 KVGGVLRRV-YS-----SCL-VPRGQKSL--RTTVLFHFLFQHWQIP------------------LGRRFRALKLWMTLR 147 (764)
Q Consensus 95 HVDa~l~~~-y~-----s~l-l~rd~~~l--~~~~s~~~d~~d~tle------------------~SRr~~ALklWatL~ 147 (764)
-+|.+.... |. +.. +....... -.+||=.+....+-+. .+-....+...++..
T Consensus 197 i~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 276 (389)
T PRK05957 197 ISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEAIKKIQDTILICPPVVSQYAALG 276 (389)
T ss_pred EEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHHHHHHHHHHHhhcccCCCcHHHHHHHH
Confidence 778753211 11 100 00000000 0011100000000000 000111233344444
Q ss_pred Hc--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHh
Q psy13453 148 SY--GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIA 225 (764)
Q Consensus 148 ~l--G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~ 225 (764)
.+ |.+-+++..++.-+..+++.+.|++.+++..+.+|+-+..+|--.|. +.+ ..++.++|.+
T Consensus 277 ~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~--------------~~~--~~~~~~~l~~ 340 (389)
T PRK05957 277 ALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNT--------------DLN--DFELVKQLIR 340 (389)
T ss_pred HHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCC--------------CCC--hHHHHHHHHH
Confidence 44 44445777777777778888999988775445677766555421121 111 2567788764
Q ss_pred -cCcEEEEecee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 226 -RKVIYIVKGSF--QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 226 -~G~~~vs~t~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
.|..+...... ++..++|+++..+ +++++++.++.|.+..+.+.
T Consensus 341 ~~gv~v~pg~~f~~~~~~~iRis~~~~--~~~~l~~~~~~l~~~~~~~~ 387 (389)
T PRK05957 341 EYRVAVIPGTTFGMKNGCYLRIAYGAL--QKATAKEGIERLVQGLKTIV 387 (389)
T ss_pred HCCEEEccchhhCCCCCCEEEEEEecC--CHHHHHHHHHHHHHHHHhhh
Confidence 68765544333 2345899998664 47788888887777665543
No 392
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=97.41 E-value=0.0033 Score=69.86 Aligned_cols=212 Identities=14% Similarity=0.063 Sum_probs=127.8
Q ss_pred eHHHHHhhcCCCCCCeEEecCCCCC----cccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC-chhhhcCCCceec
Q psy13453 23 ESFKATHSLSGTPDQVRLSGLPDSE----WLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS-LNAPVSNGPLKVG 97 (764)
Q Consensus 23 Sv~KAa~~LGl~~~~v~~Vpvd~~~----rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp-i~~ia~~~wlHVD 97 (764)
-+.+-|+.+|+ . ..+++++.+ -.|++.++. +. ..-++.-|-..|.+|+.-| +.+.. +..+-||
T Consensus 94 r~~~~a~~~g~-~---~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~v~~th~ETstGv~~~~l~~~~-~~l~iVD 161 (349)
T TIGR01364 94 KAAKEAKKYGV-V---NVVASGKEGNYTKIPDPSTWEI--SE-----DAAYVHYCANETIHGVEFRELPDVK-NAPLVAD 161 (349)
T ss_pred HHHHHHHHhCC-c---EEEeccccCCCCCCCCHHhcCC--CC-----CCCEEEEcCCCCcccEecceecccC-CCeEEEE
Confidence 34677788888 6 677765433 345554441 11 2224447888999999844 44433 5666777
Q ss_pred ccc------------------cc----ccc-eeeeecCCCccccccccccccCCcc-------cCCCC-cccHHHHHHHH
Q psy13453 98 GVL------------------RR----VYS-SCLVPRGQKSLRTTVLFHFLFQHWQ-------IPLGR-RFRALKLWMTL 146 (764)
Q Consensus 98 a~l------------------~~----~y~-s~ll~rd~~~l~~~~s~~~d~~d~t-------le~SR-r~~ALklWatL 146 (764)
|.- .| +.+ +++.++++- +...-.....+.+|. .-++= -.....+-.+|
T Consensus 162 avss~g~~~id~~~~d~~~~ssqK~lgP~Glg~l~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al 240 (349)
T TIGR01364 162 MSSNILSRPIDVSKFGLIYAGAQKNIGPAGLTVVIVRKDL-LGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVF 240 (349)
T ss_pred ccccccCccCCHHHccEEEEecccccCCCceEEEEECHHH-HhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 721 11 122 344444321 110000001122211 11222 22234778889
Q ss_pred HHccHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEeC-CCC--c-eeEEEEeeccccccccccccCccCCccHHHHHHHH
Q psy13453 147 RSYGLK-GLQAYLRKHISLAKKFADLVEQDDRFELVC-PPS--M-GLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYD 221 (764)
Q Consensus 147 ~~lG~e-Gy~~~i~~~i~lA~~l~~~I~~~p~~ell~-~P~--l-~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~ 221 (764)
+++=.+ |+.++.++...+++++.+.+++.++|.... +|. . .+++|++.. . .+..++.+
T Consensus 241 ~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~----------------~-~~~~~~~~ 303 (349)
T TIGR01364 241 KWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGN----------------E-ELEKRFLK 303 (349)
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCC----------------h-hHhHHHHH
Confidence 999888 799999999999999999999999876664 222 3 568887531 1 23356777
Q ss_pred HHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 222 RIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 222 ~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
.+.++|. ++.. ..+....+|+++ .+.++.+||+.+++.|+++.
T Consensus 304 ~~~~~Gi-~~~~-~~~~~g~vRvS~-~~~nt~edid~l~~al~~~~ 346 (349)
T TIGR01364 304 EAEERGL-VSLK-GHRSVGGMRASI-YNAMPLEGVQALVDFMKEFQ 346 (349)
T ss_pred HHHHCCC-cccC-CccccCeeEEEC-cCCCCHHHHHHHHHHHHHHH
Confidence 8888998 3322 221224799976 66678999999999999865
No 393
>PRK06541 hypothetical protein; Provisional
Probab=97.40 E-value=0.0078 Score=69.39 Aligned_cols=171 Identities=12% Similarity=0.045 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+.|++++.-+- ....|+.+|||||-.|++.||...... +..+ .+-+|.....-|
T Consensus 95 ~~~~~la~~l~~~~p~~~---------~~v~f~~sGseAve~AlklAr~~~~~~-g~~~---------r~~ii~~~~~yH 155 (460)
T PRK06541 95 PPAIELAERLAALAPGDL---------NRVFFTTGGSEAVESAWKLAKQYFKLT-GKPG---------KHKVISRAIAYH 155 (460)
T ss_pred HHHHHHHHHHHHhCCCCc---------CEEEEcCCcHHHHHHHHHHHHHHHHhc-CCCC---------ccEEEEEcCccc
Confidence 444556666777653211 246899999999999999999764211 1000 112344444445
Q ss_pred hhHHHHHHhCCC------------ceEEEecCCCCc-----cc--------HHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 642 SSVEKSAIIGDV------------PVRQLRSDDNGV-----LR--------GDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 642 ~Sv~kAa~~lGl------------~v~~Vp~d~~g~-----md--------~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
=...-+..+.|. .+..+|.....+ -+ ++.|++.+.+. ....+.+|+..--...
T Consensus 156 G~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~Aavi~EPv~g~ 233 (460)
T PRK06541 156 GTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFE--GPDTVAAVFLEPVQNA 233 (460)
T ss_pred CcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCC
Confidence 333333322211 244454332111 11 35677766532 1233455555444556
Q ss_pred cccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC
Q psy13453 697 TCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 697 ~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~ 756 (764)
.|.+-+ +.+|+++|++||+.|++|-++.|+-....-+.....|+ ..|-++ +-|.++.
T Consensus 234 ~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv-~PDivt--~gK~l~~ 294 (460)
T PRK06541 234 GGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGY-VPDIIT--CAKGITS 294 (460)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCC-CCCEEE--ecccccC
Confidence 688877 99999999999999999999955422222222222355 467665 5787764
No 394
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=97.40 E-value=0.0076 Score=68.67 Aligned_cols=174 Identities=15% Similarity=0.053 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+..+.++.+.|++++..+.. ....|+++|||||-.|++.||... .+ +-++.....-
T Consensus 82 ~~~~~~la~~l~~~~p~~~~--------~~~~f~~sGseA~e~AlklAr~~t-gr---------------~~ii~~~~~y 137 (421)
T PRK09792 82 YESYVTLAEKINALAPVSGQ--------AKTAFFTTGAEAVENAVKIARAHT-GR---------------PGVIAFSGGF 137 (421)
T ss_pred CHHHHHHHHHHHHhCCCCCC--------ceEEEeCChHHHHHHHHHHHHHhc-CC---------------CeEEEECCCc
Confidence 44555666777777643210 245899999999999999999641 11 1133334444
Q ss_pred chhHHHHHHhCC--------C-----ceEEEecC--CCCcc----cHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc
Q psy13453 641 NSSVEKSAIIGD--------V-----PVRQLRSD--DNGVL----RGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD 701 (764)
Q Consensus 641 H~Sv~kAa~~lG--------l-----~v~~Vp~d--~~g~m----d~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD 701 (764)
|=...-+..+.| . .+..+|.. .++ + +.+++++.+++.. ....+.+|+..--....|..-
T Consensus 138 HG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~-~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPvq~~~G~~~ 215 (421)
T PRK09792 138 HGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHG-ISTQDSLDAIERLFKSDI-EAKQVAAIIFEPVQGEGGFNV 215 (421)
T ss_pred CCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccc-ccHHHHHHHHHHHHHhcc-CCCceEEEEEccccCCCCCcc
Confidence 432222222211 1 24445542 222 2 3467777775421 122355666655555556443
Q ss_pred -c---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 702 -N---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 702 -p---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
| +++|.++|++||++|++|-.+.|.-....-+....-|+ ..|- ..+-|.++.-+..|++
T Consensus 216 ~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~-~pDi--~t~gK~l~~G~pigav 278 (421)
T PRK09792 216 APKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYAD-KPDL--MTMAKSLAGGMPLSGV 278 (421)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCC-CCcE--EEeehhhcCCCceEEE
Confidence 5 99999999999999999999988533221111111133 4563 4557887654445543
No 395
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=97.39 E-value=0.0045 Score=69.00 Aligned_cols=203 Identities=8% Similarity=-0.020 Sum_probs=121.0
Q ss_pred eEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc--CCCceecccc---------------
Q psy13453 38 VRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS--NGPLKVGGVL--------------- 100 (764)
Q Consensus 38 v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~--~~wlHVDa~l--------------- 100 (764)
+..++++....++.+ +. .++-+++.|...|.+|++-||++|+. ++.+-|||+-
T Consensus 110 ~~~~~~~~~~~~~~~-----~~-----~~~~lV~~~h~et~tG~~~pi~~I~~~~g~~~iVDavqs~g~~~idv~~~D~~ 179 (361)
T TIGR01366 110 PIIVTADPGSAPEPQ-----AD-----PGVDVIAWAHNETSTGVAVPVRRPEGSDDALVVIDATSGAGGLPVDIAETDVY 179 (361)
T ss_pred ceEEecCCCCCCCCc-----cC-----CCCCEEEEcccCCccceecccccccccCCCeEEEEcCccccCCCCCHHHCCEE
Confidence 577777754444432 22 13346668999999999999999975 6788899831
Q ss_pred ---ccc-c---ce--eeeecCCCc--ccccccc------cccc---CCcccC----CCCcccHH-HHHHHHHHccHH-HH
Q psy13453 101 ---RRV-Y---SS--CLVPRGQKS--LRTTVLF------HFLF---QHWQIP----LGRRFRAL-KLWMTLRSYGLK-GL 154 (764)
Q Consensus 101 ---~~~-y---~s--~ll~rd~~~--l~~~~s~------~~d~---~d~tle----~SRr~~AL-klWatL~~lG~e-Gy 154 (764)
.|+ + ++ ++.++++.. +...... ..|+ .....+ .+=...++ .+-.+++++-.+ |+
T Consensus 180 ~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~ 259 (361)
T TIGR01366 180 YFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGL 259 (361)
T ss_pred EEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCH
Confidence 111 1 11 222233111 1100000 0111 111111 12122222 567778888777 69
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEeCC-CC--c-eeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEE
Q psy13453 155 QAYLRKHISLAKKFADLVEQDDRFELVCP-PS--M-GLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIY 230 (764)
Q Consensus 155 ~~~i~~~i~lA~~l~~~I~~~p~~ell~~-P~--l-~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~ 230 (764)
..+.++..++++++.+.+++.+.++++.+ +. . .+.+|.+ +++. + ...+.+.|.++|...
T Consensus 260 e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~-~~g~--------------~--~~~v~~~L~~~gI~i 322 (361)
T TIGR01366 260 DWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDF-VDDI--------------D--AATVAKILRANGIVD 322 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEEC-CCcc--------------C--HHHHHHHHHHCCCee
Confidence 99999999999999999999988887753 21 2 2233444 2211 1 146778888888754
Q ss_pred EEec-eeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 231 IVKG-SFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 231 vs~t-~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
...- .+. ...+|++.++ .++.++++.+++.|+++.++
T Consensus 323 ~~~~~~l~-~~~vRis~~~-~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 323 TEPYRKLG-RNQLRVAMFP-AIDPDDVEALTECVDWVVER 360 (361)
T ss_pred ccCccccC-CCcEEEEcCC-CCCHHHHHHHHHHHHHHHhh
Confidence 2211 222 3579997665 77899999999999997654
No 396
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=97.39 E-value=0.0085 Score=66.69 Aligned_cols=218 Identities=13% Similarity=0.035 Sum_probs=133.1
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHHH-HHHHH-hhcccC--ccccCCchHHHHHHHHHHHHHH
Q psy13453 498 EGEDWRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIVG-DMLSG-AFGLIG--FSWLSSPACTELEVLVMNWLGK 573 (764)
Q Consensus 498 ~g~~~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~la-d~l~~-~lN~n~--~~~~~sp~~t~lE~~v~~~la~ 573 (764)
++.+-.+++++++++...+. ..+.|.|.-.-+.-.|+++- .++.. .|=+.- ...+.|...-+.--+-...+++
T Consensus 55 ~~~sE~e~l~~l~~ia~kN~---~~~sfiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~d 131 (450)
T COG0403 55 KPLSEYEALAELKEIASKNK---VFTSFIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVAD 131 (450)
T ss_pred CCCCHHHHHHHHHHHHhcCc---hhhhhccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 45688999999999765543 44556555444444455555 33321 111111 1123344433344445578899
Q ss_pred HcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHH----
Q psy13453 574 ALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAI---- 649 (764)
Q Consensus 574 llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~---- 649 (764)
|.|++- +...+-.++|.+ --|+.+|+..... ++-.++++...|..-....+
T Consensus 132 LTGm~V---------ANASm~DeaTAa-AEAm~ma~r~~k~---------------k~~~~~V~~~vhpqt~~Vl~Tra~ 186 (450)
T COG0403 132 LTGLDV---------ANASMLDEATAA-AEAMLMAKRVTKK---------------KRNKFLVPKDVHPQTLDVLRTRAE 186 (450)
T ss_pred HhCCCc---------ccchhhhhHHHH-HHHHHHHHHhhcC---------------cCceEEecCCCCHHHHHHHHhhcc
Confidence 999986 344566777744 3344444332111 12258899999988666544
Q ss_pred hCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccc
Q psy13453 650 IGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALL 729 (764)
Q Consensus 650 ~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~ 729 (764)
-+|+.+..++.+ |.++|+++ ... ..+.|+....++.-+.++|+.+|.++++++|..+.|=+=--+..++
T Consensus 187 ~~g~~i~~~~~~-----d~~~l~~~-~~~-----~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL 255 (450)
T COG0403 187 GLGIEIEVVDAD-----DLDDLESA-DDG-----DVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVAADPLALGLL 255 (450)
T ss_pred cCceEEEEeccc-----hhhhhhhc-ccc-----CeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEEechhHhhcc
Confidence 356777777766 78888877 321 2578888998865447888999999999999977654321111222
Q ss_pred cchhhhhhcCCCcccEEEEcCCccCCCCcCce
Q psy13453 730 LPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCS 761 (764)
Q Consensus 730 ~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g 761 (764)
-|. |==.||-+.=|.+- +|+|.+-|
T Consensus 256 ~pP------Ge~GADIvvG~~Qr-fGvPmgfG 280 (450)
T COG0403 256 KPP------GEFGADIVVGSAQR-FGVPMGFG 280 (450)
T ss_pred CCc------cccCCceEEecCcc-cCCCcCCC
Confidence 232 22257999999998 66787765
No 397
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=97.36 E-value=0.0055 Score=70.85 Aligned_cols=166 Identities=13% Similarity=-0.020 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 560 CTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 560 ~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
.+..|.++.+.|++++..- ....|+.+||||+..|++.||.... + +-+|-....
T Consensus 137 ~~~~~~~lAe~l~~~~p~~----------~~v~f~~SGsEA~e~AlklAR~~tg-r---------------~~Ii~~~g~ 190 (474)
T PLN02482 137 PCLLENVLAEMVIDAVPSV----------EMVRFVNSGTEACMGVLRLARAYTG-R---------------EKIIKFEGC 190 (474)
T ss_pred CCHHHHHHHHHHHHhCCCC----------CEEEEeCChHHHHHHHHHHHHHhcC-C---------------CEEEEECCc
Confidence 3467778888898887421 2467999999999999999997621 1 112222222
Q ss_pred cchhHH--HHHHh-----------CCC------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc
Q psy13453 640 SNSSVE--KSAII-----------GDV------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF 700 (764)
Q Consensus 640 aH~Sv~--kAa~~-----------lGl------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai 700 (764)
-|=... -+... -|+ .+..+|-+ |+++|++.|++. +..+.+|+.---....|.+
T Consensus 191 YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n-----d~~~l~~~l~~~---~~~iAavI~Epv~g~~G~i 262 (474)
T PLN02482 191 YHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYN-----DLEAVKKLFEAN---KGEIAAVILEPVVGNSGFI 262 (474)
T ss_pred cCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCC-----ChHHHHHHHHhC---CCceEEEEECCCCCCCCCc
Confidence 332110 00000 011 11222221 689999988642 2334555554444445666
Q ss_pred cc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 701 DN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 701 Dp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
-| +++|.++|++||+.|++|-++.|+ ....-+....-|+ ..|-+++ -|.++.-+.+|++
T Consensus 263 ~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv-~PDi~t~--gK~lggG~Pigav 325 (474)
T PLN02482 263 VPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGI-TPDLTTL--GKVIGGGLPVGAY 325 (474)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCC-CCCEEEe--cchhhCCCceEEE
Confidence 55 568999999999999999998765 3322222222355 4676655 7877654445554
No 398
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=97.36 E-value=0.0074 Score=68.76 Aligned_cols=170 Identities=14% Similarity=0.070 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
...++.++|+++.+.+-. ..-+|+++|++||-.|++.||... .+ +.+|..+..-|-
T Consensus 85 ~~~~la~~l~~~~~~~~~--------~~~~f~~sGsea~e~Alklar~~~-~r---------------~~iv~~~~~yHG 140 (425)
T PRK08088 85 PYLELCEKMNQKVPGDFA--------KKTLLVTTGSEAVENAVKIARAAT-KR---------------SGVIAFTGAYHG 140 (425)
T ss_pred HHHHHHHHHHHhCCCCCC--------CEEEEeCCcHHHHHHHHHHHHHHh-CC---------------CeEEEECCccCC
Confidence 344677778887654221 245799999999999999998752 11 124555777776
Q ss_pred hHHHHHHhCCC-------------ceEE--EecCCCCccc----HHHHHHHHHHhhhcCCCceEEEEeeccCCccccc--
Q psy13453 643 SVEKSAIIGDV-------------PVRQ--LRSDDNGVLR----GDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD-- 701 (764)
Q Consensus 643 Sv~kAa~~lGl-------------~v~~--Vp~d~~g~md----~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD-- 701 (764)
+..-+..+.+- .+.. +|.+.++ ++ ++.|++.+++.. .+..+.+|+..--...-|.+-
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~l~~~l~~~~-~~~~~aavi~Epi~~~~G~~~~~ 218 (425)
T PRK08088 141 RTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHG-VSEDDAIASIERIFKNDA-APEDIAAIIIEPVQGEGGFYAAS 218 (425)
T ss_pred ccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccC-ccHHHHHHHHHHHHHhcc-CCCceEEEEECcccCCCCCcCCC
Confidence 65444433221 1222 2333222 33 456777775321 223455555444334445444
Q ss_pred --cHHHHHHHHHhcCCEEEEeccccccccccchh-hhhhcCCCcccEEEEcCCccCCCCcCcee
Q psy13453 702 --NLEELGPICQEYNIWLHVDAAYAGSALLLPEY-AHLKRGLEYVDSFDFNTHKWLLVNFDCSA 762 (764)
Q Consensus 702 --pl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~-r~~l~gie~aDSit~d~HK~l~~P~~~g~ 762 (764)
-+++|.++|++||+++++|-+|++.-. .+.. .....++ ..| ..++-|.++.-+..|+
T Consensus 219 ~~~~~~l~~l~~~~~~~lI~Dev~~g~g~-~g~~~~~~~~~~-~pd--i~s~sK~l~~G~rig~ 278 (425)
T PRK08088 219 PAFMQRLRALCDEHGIMLIADEVQTGAGR-TGTLFAMEQMGV-AAD--LTTFAKSIAGGFPLAG 278 (425)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccCCCc-CcchhHHhhcCC-CCC--EEEEeccccCCCccee
Confidence 499999999999999999999997322 1211 1111233 234 3566787764343444
No 399
>PLN02483 serine palmitoyltransferase
Probab=97.34 E-value=0.014 Score=67.96 Aligned_cols=224 Identities=12% Similarity=0.016 Sum_probs=130.8
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCC--C-----CcEEEEeeCC-cccccccCchhhhc-
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSF--L-----CPMCSGYCGR-TLHQDIQSLNAPVS- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G--~-----~p~~VatAGT-T~~G~iDpi~~ia~- 90 (764)
.|.|+..++++.|... +.+|.+ |++.|++.|++....+ + +.++|.+-|. .+.|.+-+++++.+
T Consensus 194 ~h~s~~~~~~~~Ga~v---~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~l 265 (489)
T PLN02483 194 NHNSIVNGARGSGATI---RVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAV 265 (489)
T ss_pred hhHHHHHHHHHcCCeE---EEEeCC-----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHH
Confidence 7899999999999877 888865 5678888777543222 1 1244444444 67799999999876
Q ss_pred ----CCCceecccccccc--------ceeee--ecCCCccccccccc------c--------cc-C----CcccCCCCcc
Q psy13453 91 ----NGPLKVGGVLRRVY--------SSCLV--PRGQKSLRTTVLFH------F--------LF-Q----HWQIPLGRRF 137 (764)
Q Consensus 91 ----~~wlHVDa~l~~~y--------~s~ll--~rd~~~l~~~~s~~------~--------d~-~----d~tle~SRr~ 137 (764)
++++-+|.+....+ +.+.- .++...+-.+|+=. + +. . .++..++-..
T Consensus 266 a~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~GG~i~~~~~li~~l~~~~~~~~~~~~~~p 345 (489)
T PLN02483 266 CKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKRTCPAHLYATSMSP 345 (489)
T ss_pred HHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCceEEEcCHHHHHHHHHhCccccccCCcCH
Confidence 88998888753211 00100 01111111111100 0 00 0 0111111111
Q ss_pred cHH-HHHHHHHHc----cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCc
Q psy13453 138 RAL-KLWMTLRSY----GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGD 212 (764)
Q Consensus 138 ~AL-klWatL~~l----G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~ 212 (764)
.++ .+-++|+.+ |.+-..+++++.-+..++|.+.|+++ ++++..+....++.+....+
T Consensus 346 ~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~-G~~v~~~~~sp~~~l~l~~~---------------- 408 (489)
T PLN02483 346 PAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNP---------------- 408 (489)
T ss_pred HHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCEEEEEECCH----------------
Confidence 111 112234322 22334567788889999999999997 88877665555655543210
Q ss_pred cHHHHHHHHHHHhcCcEEEEecee----CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 213 NDLNKAVYDRIIARKVIYIVKGSF----QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 213 d~~n~~L~~~L~~~G~~~vs~t~l----~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
.--.++.++|.++|.+++. ... .+...+|+|+..-+ ++++++++++.|+++.+.+.
T Consensus 409 -~~~~~~~~~Ll~~GI~v~~-~~fp~~p~~~~~vRi~isa~~-t~edId~~l~~L~~~~~~~~ 468 (489)
T PLN02483 409 -AKIPAFSRECLKQNVAVVV-VGFPATPLLLARARICISASH-SREDLIKALEVISEVGDLVG 468 (489)
T ss_pred -HHHHHHHHHHHHCCcEEee-eCCCCCCCCCceEEEEeCCCC-CHHHHHHHHHHHHHHHHHhC
Confidence 0113677888888986653 222 22357999877666 58899999999999887654
No 400
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=97.34 E-value=0.013 Score=66.79 Aligned_cols=141 Identities=15% Similarity=0.050 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+....++.+.|++++.-+. .....|+++|||||-.|++.||... .+ +-++..+..-
T Consensus 82 ~~~~~~la~~l~~~~p~~~--------~~~v~f~~SGseA~e~AlklAr~~t-gr---------------~~ii~~~~~y 137 (425)
T PRK07495 82 YENYVRLAERLNALVPGDF--------AKKTIFVTTGAEAVENAVKIARAAT-GR---------------SAVIAFGGGF 137 (425)
T ss_pred CHHHHHHHHHHHHhCCCCC--------CCEEEECCchHHHHHHHHHHHHHhh-CC---------------CeEEEECCCc
Confidence 3445556777777764211 0246899999999999999998752 11 1134444444
Q ss_pred chhHHHHHHhCC-------------CceEEEecCCC-Cccc----HHHHHHHHHHhhhcCCCceEEEEeeccCCcccc--
Q psy13453 641 NSSVEKSAIIGD-------------VPVRQLRSDDN-GVLR----GDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF-- 700 (764)
Q Consensus 641 H~Sv~kAa~~lG-------------l~v~~Vp~d~~-g~md----~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai-- 700 (764)
|=...-+..+.| -++..+|...+ ..++ .++|++.++... .+..+.+|+..--..+.|.+
T Consensus 138 HG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPv~g~~G~~~~ 216 (425)
T PRK07495 138 HGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADV-DPQRVAAIIIEPVQGEGGFYPA 216 (425)
T ss_pred CCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccC
Confidence 533222222211 13455665321 1133 344465554311 12234455544333334544
Q ss_pred --ccHHHHHHHHHhcCCEEEEecccccc
Q psy13453 701 --DNLEELGPICQEYNIWLHVDAAYAGS 726 (764)
Q Consensus 701 --Dpl~eIa~i~~~~glwLHVDaA~Gg~ 726 (764)
+-+++|.++|++||++|++|-++.|+
T Consensus 217 ~~~~l~~l~~l~~~~g~llI~DEv~tG~ 244 (425)
T PRK07495 217 PAAFMKALRELCDQHGILLIADEVQTGF 244 (425)
T ss_pred CHHHHHHHHHHHHHcCCEEEEechhhcC
Confidence 35899999999999999999999874
No 401
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=97.34 E-value=0.01 Score=68.03 Aligned_cols=170 Identities=16% Similarity=0.077 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
..+.++.+.|++++. ..+ ....|+++|||||-.|++.||.....+ +.. .. +-+|.....-|
T Consensus 89 ~~~~~la~~l~~~~p--~~~-------~~v~f~~sGseA~e~AlklAr~~~~~~-g~~--------~r-~~ii~~~~~yH 149 (442)
T PRK13360 89 PKAFELANRIAEIAP--GGL-------NHVFFTNSGSESVDTALKIALAYHRAR-GEG--------SR-TRLIGRERGYH 149 (442)
T ss_pred HHHHHHHHHHHHhCC--CCC-------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCC--------CC-cEEEEEcCCcC
Confidence 445567777888762 111 236799999999999999999863211 000 00 11333444444
Q ss_pred hhHHHHHHhCC------------CceEEEecCCC---Cc----------ccHHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 642 SSVEKSAIIGD------------VPVRQLRSDDN---GV----------LRGDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 642 ~Sv~kAa~~lG------------l~v~~Vp~d~~---g~----------md~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
=.-.-+..+.| -.+..+|...+ .. -..++|++.++.. .+..+.+|+.---...
T Consensus 150 G~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~aavivEpi~g~ 227 (442)
T PRK13360 150 GVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH--DASTIAAVIVEPVAGS 227 (442)
T ss_pred CccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCC
Confidence 33222222211 12444554311 00 1256788877532 1223445554444445
Q ss_pred cccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCC
Q psy13453 697 TCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLL 755 (764)
Q Consensus 697 ~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~ 755 (764)
.|.+-| +++|+++|++||+.|++|-++.|+-....-+.....|+ ..|-+++ -|.++
T Consensus 228 ~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDivt~--gK~l~ 287 (442)
T PRK13360 228 TGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGV-TPDLLTC--AKGLT 287 (442)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCC-CCceeee--eeccc
Confidence 577777 99999999999999999999865422221122222355 4675544 67764
No 402
>PRK06108 aspartate aminotransferase; Provisional
Probab=97.34 E-value=0.009 Score=66.44 Aligned_cols=215 Identities=12% Similarity=0.070 Sum_probs=123.1
Q ss_pred eeeHHHHHhhcCCCCCCeEEecCCC---CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc----
Q psy13453 21 IYESFKATHSLSGTPDQVRLSGLPD---SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS---- 90 (764)
Q Consensus 21 ~YSv~KAa~~LGl~~~~v~~Vpvd~---~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~---- 90 (764)
+.++..+++.+|+.. +.||++. ++.+|+++|++.+++. +-+++-+.++-++|.+=+ ++++++
T Consensus 118 y~~~~~~~~~~g~~~---~~v~~~~~~~~~~~d~~~l~~~~~~~-----~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~ 189 (382)
T PRK06108 118 WPNLVAAPKILGARV---VCVPLDFGGGGWTLDLDRLLAAITPR-----TRALFINSPNNPTGWTASRDDLRAILAHCRR 189 (382)
T ss_pred ccchHHHHHHCCCEE---EEeeCCCCCCCccCCHHHHHHhcCcc-----ceEEEEECCCCCCCcccCHHHHHHHHHHHHH
Confidence 346677889999877 8999973 4679999999988642 224555678889997644 455554
Q ss_pred -CCCceeccccccc-c------ceee-eec-CCCc-cccccccccc---------------------cCCcccCCCCccc
Q psy13453 91 -NGPLKVGGVLRRV-Y------SSCL-VPR-GQKS-LRTTVLFHFL---------------------FQHWQIPLGRRFR 138 (764)
Q Consensus 91 -~~wlHVDa~l~~~-y------~s~l-l~r-d~~~-l~~~~s~~~d---------------------~~d~tle~SRr~~ 138 (764)
++|+.+|.+.... | .+++ +.. +... .-.+|+-.+. +..++.. ...
T Consensus 190 ~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~~~~~~~---~~~ 266 (382)
T PRK06108 190 HGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEKLIEYNTS---CVA 266 (382)
T ss_pred CCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHHHHHHhccc---CCC
Confidence 8899999753111 0 0100 000 0000 0001110000 0011111 112
Q ss_pred HHHHHHHHHH--ccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEE-EeeccccccccccccCccCCccHH
Q psy13453 139 ALKLWMTLRS--YGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCF-RLKVRFWDKLDNLFGTISFGDNDL 215 (764)
Q Consensus 139 ALklWatL~~--lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~F-ry~P~~~~~~~~~~~~~~~~~d~~ 215 (764)
.+...++... -|.+-++++.++..+..+++.+.+++.+++++. .|+-+..+| ++. . ..+
T Consensus 267 ~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~p~~g~~~~~~l~-~--------------~~~-- 328 (382)
T PRK06108 267 QFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVA-KPDGAMYAFFRIP-G--------------VTD-- 328 (382)
T ss_pred hHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCccc-CCCeeEEEEEeCC-C--------------CCC--
Confidence 2222222222 255556777888888888999999988888865 455554444 332 1 011
Q ss_pred HHHHHHHHH-hcCcEEEEecee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 216 NKAVYDRII-ARKVIYIVKGSF--QDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 216 n~~L~~~L~-~~G~~~vs~t~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
..++.++|. +.|........+ .+..++|+++.. +++++++.++.|+++.
T Consensus 329 ~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~---~~~~l~~~l~~l~~~l 380 (382)
T PRK06108 329 SLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR---DPARLDEAVERLRRFL 380 (382)
T ss_pred HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC---CHHHHHHHHHHHHHHH
Confidence 246777775 467755433322 235789998886 7889999998887653
No 403
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=97.33 E-value=0.0035 Score=69.22 Aligned_cols=210 Identities=10% Similarity=0.051 Sum_probs=117.1
Q ss_pred eeH-HHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCce
Q psy13453 22 YES-FKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLK 95 (764)
Q Consensus 22 YSv-~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlH 95 (764)
|+. ..+++..|+.. +.+|.++++.+|+++|++++... +-+++-+.+..++|.+-|++++.+ +++++
T Consensus 121 y~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~l~~~~~~~-----~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li 192 (361)
T PRK00950 121 FSYYEISAKAHGAKP---VYAKREEDFSLDVDSVLNAITEK-----TKVIFLCTPNNPTGNLIPEEDIRKILESTDALVF 192 (361)
T ss_pred hHHHHHHHHHcCCEE---EEeecCCCCCcCHHHHHHHhccC-----CCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEE
Confidence 544 45788888877 88998888899999999988542 235555678999999999888765 78899
Q ss_pred ecccccccc----ce-------eeeec-CCCccc-cccccccccCCc-------ccCCCCcccHHHHHHHHHHccHHH-H
Q psy13453 96 VGGVLRRVY----SS-------CLVPR-GQKSLR-TTVLFHFLFQHW-------QIPLGRRFRALKLWMTLRSYGLKG-L 154 (764)
Q Consensus 96 VDa~l~~~y----~s-------~ll~r-d~~~l~-~~~s~~~d~~d~-------tle~SRr~~ALklWatL~~lG~eG-y 154 (764)
+|....... .+ ++..+ -.+.+- .-+...+-.... .....-....+..++++..+-..+ +
T Consensus 193 ~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~ 272 (361)
T PRK00950 193 VDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLIDYYMRAKTPFSLTRLSQAAAIAALSDKEYI 272 (361)
T ss_pred EECchhhhCccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHHHH
Confidence 999652111 00 11100 000000 000000000000 000000123445555555554444 3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEec
Q psy13453 155 QAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKG 234 (764)
Q Consensus 155 ~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t 234 (764)
.+..++..+..+++.+.++ +.+ .++..+.+.++.. ..+ ..++.++|.+.|.......
T Consensus 273 ~~~~~~~~~~r~~l~~~l~----~~~-~~~~~~~i~~~~~----------------~~~--~~~~~~~l~~~gv~v~~~~ 329 (361)
T PRK00950 273 EKSIEHGIKSREYLYNELP----FKV-YPSEANFVLVDVT----------------PMT--AKEFCEELLKRGVIVRDCT 329 (361)
T ss_pred HHHHHHHHHHHHHHHhhcC----eeE-CCCcceEEEEECC----------------CCC--HHHHHHHHHHCCEEEeeCC
Confidence 4444444444455555544 454 3445554545431 111 2477888888887554433
Q ss_pred ee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 235 SF--QDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 235 ~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
.+ .+..++|+++. +.++++.+++.|+++
T Consensus 330 ~f~~~~~~~lRis~~----~~~~~~~l~~~L~~i 359 (361)
T PRK00950 330 SFRGLGDYYIRVSIG----TFEENERFLEILKEI 359 (361)
T ss_pred ccCCCCCCeEEEECC----CHHHHHHHHHHHHHH
Confidence 33 23568999876 567899999998775
No 404
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=97.31 E-value=0.0047 Score=68.05 Aligned_cols=217 Identities=10% Similarity=0.037 Sum_probs=132.5
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC--CCCcccHHHHHHHHHHHhhCCC-CcEEEEeeCCccccccc---Cchhhhc---
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP--DSEWLAYLTLRTIYESFRKSFL-CPMCSGYCGRTLHQDIQ---SLNAPVS--- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd--~~~rmD~~aLe~~I~~~~~~G~-~p~~VatAGTT~~G~iD---pi~~ia~--- 90 (764)
.+.++..+++.+|+.. +.+|++ +++.+|+++|++.+++...++. ..+++-+-+.-++|..= .+.++++
T Consensus 102 ~y~~~~~~~~~~g~~~---~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~ 178 (363)
T PF00155_consen 102 CYPSYIEAARLLGAEV---IPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAR 178 (363)
T ss_dssp SSTHHHHHHHHTTSEE---EEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHH
T ss_pred ccccccccccccCcee---eeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhc
Confidence 3466888999999987 888875 7889999999999998766553 33555677888999874 4444532
Q ss_pred --CCCceeccccccc-cc---------------eeeeec-CCCcc--cc---cccc-ccc----cCCc-ccCCCCcccHH
Q psy13453 91 --NGPLKVGGVLRRV-YS---------------SCLVPR-GQKSL--RT---TVLF-HFL----FQHW-QIPLGRRFRAL 140 (764)
Q Consensus 91 --~~wlHVDa~l~~~-y~---------------s~ll~r-d~~~l--~~---~~s~-~~d----~~d~-tle~SRr~~AL 140 (764)
++|+=+|-..... +. .++..+ -.+.+ .+ .+-. ..+ +..+ ..-++ .++
T Consensus 179 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~~l~~~~~~~~~---~~~ 255 (363)
T PF00155_consen 179 EYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPPELIERLRRFQRSGLS---SSP 255 (363)
T ss_dssp HTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEHHHHHHHHHHHHHTTS---SHH
T ss_pred ccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccchhhhhhhhhhccccccc---cch
Confidence 7777666643111 00 011111 01100 00 0000 000 0000 00011 333
Q ss_pred HHHHHHHHccHH-----HHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHH
Q psy13453 141 KLWMTLRSYGLK-----GLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDL 215 (764)
Q Consensus 141 klWatL~~lG~e-----Gy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~ 215 (764)
...++...+... -++++.++..+..+++.+.+++. ++.+..++ .+.++|.-.+ .+ -
T Consensus 256 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~-~~~~~~~~~~----------------~~-~ 316 (363)
T PF00155_consen 256 MQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPE-AGFFLWVRLD----------------PN-D 316 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHS-BSSEEEEEES----------------HH-H
T ss_pred hhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeecc-CccEEEEEcc----------------cc-h
Confidence 333333333333 45777788888899999999887 99987666 7777774321 01 2
Q ss_pred HHHHHHHHHhc-CcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHH
Q psy13453 216 NKAVYDRIIAR-KVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEI 263 (764)
Q Consensus 216 n~~L~~~L~~~-G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l 263 (764)
..++.++|.++ |...........+.++|+++ ...++++++.+++.|
T Consensus 317 ~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~--a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 317 AEELAQELLEEYGILVRPGSYFGVPGYIRISL--ASHSEEDLEEALERL 363 (363)
T ss_dssp HHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG--GCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe--ccCCHHHHHHHHhhC
Confidence 36788889988 98766654444467899987 667899999998865
No 405
>PRK09064 5-aminolevulinate synthase; Validated
Probab=97.29 E-value=0.012 Score=66.45 Aligned_cols=220 Identities=8% Similarity=0.001 Sum_probs=128.6
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
.|.|+.-++...|... +.++. .|++.|++.++... ..++-+++......++|.+-|++++.+ ++++
T Consensus 141 ~h~s~~~~~~~~~~~~---~~~~~-----~d~~~le~~l~~~~-~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~l 211 (407)
T PRK09064 141 NHASMIEGIRRSRCEK---HIFRH-----NDVAHLEELLAAAD-PDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALT 211 (407)
T ss_pred chHHHHHHHHHcCCcE---EEECC-----CCHHHHHHHHHhcc-CCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEE
Confidence 5788888888877654 55553 37889999887531 112224455567788999999999876 8899
Q ss_pred eecccccc-cc---ceeee-----ecCCCcccccccc------cc-----c-------c-CCcccCCCC-cccHHHHHHH
Q psy13453 95 KVGGVLRR-VY---SSCLV-----PRGQKSLRTTVLF------HF-----L-------F-QHWQIPLGR-RFRALKLWMT 145 (764)
Q Consensus 95 HVDa~l~~-~y---~s~ll-----~rd~~~l~~~~s~------~~-----d-------~-~d~tle~SR-r~~ALklWat 145 (764)
.||.++.. .| +..+. ..+......+|+= .+ + + ..+....+. ...+..+.++
T Consensus 212 ivDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~GG~~~~~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~a 291 (407)
T PRK09064 212 YLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMGGYIAGSAALVDAVRSYAPGFIFTTSLPPAIAAAALAS 291 (407)
T ss_pred EEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccCceEecCHHHHHHHHHhCccccccCcCCHHHHHHHHHH
Confidence 99997531 11 11110 0011111111110 00 0 0 111212222 2233445666
Q ss_pred HHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHh
Q psy13453 146 LRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIA 225 (764)
Q Consensus 146 L~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~ 225 (764)
+..+-.. ....++..+++++|.+.+++. +++++. +..+++.|... .+....++.++|.+
T Consensus 292 l~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~iv~i~~~-----------------~~~~~~~l~~~L~~ 350 (407)
T PRK09064 292 IRHLKES--NEERERHQERAAKLKAALDAA-GIPVMP-NESHIVPVMVG-----------------DPEKCKKASDMLLE 350 (407)
T ss_pred HHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCCCC-CCCCEEEEEeC-----------------CHHHHHHHHHHHHH
Confidence 6665443 334577888999999999985 677654 45666666541 11123578888875
Q ss_pred c-CcEEEEec--ee-CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 226 R-KVIYIVKG--SF-QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 226 ~-G~~~vs~t--~l-~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
+ |.+..... .. .+...+|+++. ...++++++.+++.|+++.+++
T Consensus 351 ~~gi~v~~~~~p~~~~~~~~lRis~~-~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 351 EHGIYVQPINYPTVPRGTERLRITPT-PFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred hCCEEEeeECCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHc
Confidence 4 76543321 11 24467999744 4557899999999999887553
No 406
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=97.29 E-value=0.01 Score=67.73 Aligned_cols=226 Identities=6% Similarity=-0.074 Sum_probs=126.8
Q ss_pred HHHHHhhcCCCCCCeEEecCC--CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc-----CCC
Q psy13453 24 SFKATHSLSGTPDQVRLSGLP--DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS-----NGP 93 (764)
Q Consensus 24 v~KAa~~LGl~~~~v~~Vpvd--~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~-----~~w 93 (764)
...++.+.|+.. +.+++. +++.+|+++|++.+++. +..++-+-++-++|.+-| ++++.+ +++
T Consensus 154 y~~~~~~~g~~~---~~~~~~~~~~~~~d~~~l~~~~~~~-----~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ 225 (430)
T PLN00145 154 YEARAVFSGLEV---RHFDLLPERGWEVDLEGVEALADEN-----TVAMVIINPNNPCGSVYSYEHLAKIAETARKLGIL 225 (430)
T ss_pred HHHHHHHcCCEE---EEeeCCcccCCcCCHHHHHHHhCcC-----ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCE
Confidence 456788889877 888774 46899999999988753 335566668899999988 555543 889
Q ss_pred ceeccccccc-cc-----eeeeecCC-C-ccccccccccccCCccc-------------------------CCCCcccHH
Q psy13453 94 LKVGGVLRRV-YS-----SCLVPRGQ-K-SLRTTVLFHFLFQHWQI-------------------------PLGRRFRAL 140 (764)
Q Consensus 94 lHVDa~l~~~-y~-----s~ll~rd~-~-~l~~~~s~~~d~~d~tl-------------------------e~SRr~~AL 140 (764)
+.+|...... |. ++....+. . ..-.+||=.+....|-+ ..+-....+
T Consensus 226 ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (430)
T PLN00145 226 VIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNISTDPATF 305 (430)
T ss_pred EEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhcccCCCCHH
Confidence 9999853211 11 10000000 0 00000110000000000 000011223
Q ss_pred HHHHHHHHc--c-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHH
Q psy13453 141 KLWMTLRSY--G-LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNK 217 (764)
Q Consensus 141 klWatL~~l--G-~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~ 217 (764)
..++....+ + .+-++++++..-+..+++.+.|++++++.....|+-....|--.|.... .+.. -..
T Consensus 306 ~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~----------~~~~-~~~ 374 (430)
T PLN00145 306 VQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCL----------SGIK-DDM 374 (430)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhhc----------CCCC-CHH
Confidence 334433333 2 3345666777777788899999998888766667666555422221000 0110 013
Q ss_pred HHHH-HHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 218 AVYD-RIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 218 ~L~~-~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
++.. .+.+.|.++.-.+.+....++|++++. ..+.++..++.|.++.++..
T Consensus 375 ~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~---~~~~l~~al~rl~~~~~~~~ 426 (430)
T PLN00145 375 DFCCKLAKEESVVVLPGSALGMKNWLRITFAI---DPPSLEDGLERLKSFCLRHA 426 (430)
T ss_pred HHHHHHHHhCCEEEeCccccCCCCeEEEEeCC---CHHHHHHHHHHHHHHHHHhc
Confidence 4444 444567766555555556899999884 57888888888888776543
No 407
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=97.29 E-value=0.012 Score=67.54 Aligned_cols=144 Identities=15% Similarity=0.033 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
..+.++.+.|++++..+- ....|+.+|||||-.|++.||.....+ +.. .. +-+|.....-|
T Consensus 92 ~~~~~la~~L~~~~p~~~---------~~v~f~~sGseAve~AlklAr~~~~~~-g~~--------~r-~~ii~~~~~yH 152 (445)
T PRK09221 92 PLAFELAERLAELAPGGL---------DHVFFTNSGSESVDTALKIALAYHRAR-GQG--------TR-TRLIGRERGYH 152 (445)
T ss_pred HHHHHHHHHHHHhCCCCC---------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCC--------CC-cEEEEECCCcC
Confidence 344556777777763211 246899999999999999999864321 100 01 12344444455
Q ss_pred hhHHHHHHhCC------------CceEEEecCC---C--C--------cccHHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 642 SSVEKSAIIGD------------VPVRQLRSDD---N--G--------VLRGDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 642 ~Sv~kAa~~lG------------l~v~~Vp~d~---~--g--------~md~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
=...-+..+.| ..+..+|... . + .-..++|++.++... ...+.+|+.---...
T Consensus 153 G~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~iAavi~Epv~g~ 230 (445)
T PRK09221 153 GVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHD--ASTIAAVIVEPMAGS 230 (445)
T ss_pred ccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcC--CCcEEEEEEecccCC
Confidence 33222222211 1234444321 0 0 012457777775321 123556665555556
Q ss_pred cccccc----HHHHHHHHHhcCCEEEEecccccc
Q psy13453 697 TCAFDN----LEELGPICQEYNIWLHVDAAYAGS 726 (764)
Q Consensus 697 ~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~ 726 (764)
.|.+-| +++|.++|++||+.|++|-++.|+
T Consensus 231 ~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~ 264 (445)
T PRK09221 231 AGVLVPPKGYLQRLREICDKHGILLIFDEVITGF 264 (445)
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCC
Confidence 688888 999999999999999999998664
No 408
>KOG1368|consensus
Probab=97.28 E-value=0.0019 Score=68.52 Aligned_cols=197 Identities=12% Similarity=0.101 Sum_probs=120.2
Q ss_pred EEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcc---cccccCchhhhc--------CCCceeccc-------
Q psy13453 39 RLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTL---HQDIQSLNAPVS--------NGPLKVGGV------- 99 (764)
Q Consensus 39 ~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~---~G~iDpi~~ia~--------~~wlHVDa~------- 99 (764)
+.|...+++.||++++|++|....-.---|.- .-..=+|- -|.+=||+++.. ++.+|.||+
T Consensus 124 ~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAav 203 (384)
T KOG1368|consen 124 RTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAV 203 (384)
T ss_pred EeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHH
Confidence 77777789999999999999842200011111 11122222 247777777543 888999993
Q ss_pred -c----------------------ccccceeeeecCCCccccccccccccCCcccCCCCcccHHHHHHHHHHccHHHHHH
Q psy13453 100 -L----------------------RRVYSSCLVPRGQKSLRTTVLFHFLFQHWQIPLGRRFRALKLWMTLRSYGLKGLQA 156 (764)
Q Consensus 100 -l----------------------~~~y~s~ll~rd~~~l~~~~s~~~d~~d~tle~SRr~~ALklWatL~~lG~eGy~~ 156 (764)
+ ..|-+|++ +..++....+ -....++.|+-|-..+-.-++|-.+- +.+ .
T Consensus 204 asgV~vk~i~~~fDSVsiCLSKglgAPVGSVi-VG~k~FI~kA-----~~~RKalGGGmRQsGvLaaaaLval~-~~~-~ 275 (384)
T KOG1368|consen 204 ASGVPVKKICSAFDSVSICLSKGLGAPVGSVI-VGSKDFIDKA-----RHFRKALGGGMRQSGVLAAAALVALD-ENV-P 275 (384)
T ss_pred HcCCCHHHHHHhhhhhhhhhhccCCCCcccEE-EccHHHHHHH-----HHHHHHhcCchhHHHHHHHHHHHHhh-cch-H
Confidence 1 11122222 2222111111 01233555655444443334443332 122 2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEeCC-CCceeEEEEeeccccccccccccCccCCccHHH-HHHHHHHHhcCcEEEEec
Q psy13453 157 YLRKHISLAKKFADLVEQDDRFELVCP-PSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLN-KAVYDRIIARKVIYIVKG 234 (764)
Q Consensus 157 ~i~~~i~lA~~l~~~I~~~p~~ell~~-P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n-~~L~~~L~~~G~~~vs~t 234 (764)
.+++.-+.|+.+++.+.+.++|++-.+ .+.|+|..-.. ..+++ ..+.+.+.+.|...+...
T Consensus 276 ~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~-----------------q~~~~~~~l~~~~~k~gi~lm~~~ 338 (384)
T KOG1368|consen 276 LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLC-----------------QARLTAEELCKFLEKNGILLMGGA 338 (384)
T ss_pred HHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecc-----------------cccCCHHHHHHHHHHCCeEEeecc
Confidence 566777888888889998888998776 77777776432 22344 689999999998777665
Q ss_pred eeCCeeEEEEeccCCCCCHHHHHHHHHHHHH
Q psy13453 235 SFQDRLFMRFAICSSQTEESDVQLGWNEIRT 265 (764)
Q Consensus 235 ~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~ 265 (764)
..+ +|+ +.|+.++.++++.++..+++
T Consensus 339 s~r----~Ri-vlh~Qvt~~~ve~~~~~~~k 364 (384)
T KOG1368|consen 339 SRR----IRI-VLHHQVTDEDVEYVKSVLSK 364 (384)
T ss_pred ccc----eEE-EEEEecCHHHHHHHHHHHHH
Confidence 554 888 68899999999999998853
No 409
>PRK07908 hypothetical protein; Provisional
Probab=97.28 E-value=0.0088 Score=65.96 Aligned_cols=206 Identities=11% Similarity=0.026 Sum_probs=118.8
Q ss_pred HHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc----CCCceecccc
Q psy13453 25 FKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS----NGPLKVGGVL 100 (764)
Q Consensus 25 ~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~----~~wlHVDa~l 100 (764)
.++++.+|+.. +.||+++++.+|++++++ ++-+++-+-++.+||.+=|.+++.+ +.|+.+|.+.
T Consensus 110 ~~~~~~~G~~i---~~v~~~~~~~~d~~~l~~---------~~~~i~l~np~NPTG~~~~~~~l~~l~~~~~~iIvDe~y 177 (349)
T PRK07908 110 EAALRAAGIPV---HRVVLDPPFRLDPAAVPD---------DADLVVIGNPTNPTSVLHPAEQLLALRRPGRILVVDEAF 177 (349)
T ss_pred HHHHHHcCCEE---EeeccCcccCcChhHhcc---------CCCEEEEcCCCCCCCCCcCHHHHHHHHhcCCEEEEECcc
Confidence 46778889877 899999879999986632 1225555788999999988887664 6778888754
Q ss_pred cccc-c---e--------eeeecC-CCccc-cccccccccC---------CcccCCCCcccHHHHHHHHHH-ccHHHHHH
Q psy13453 101 RRVY-S---S--------CLVPRG-QKSLR-TTVLFHFLFQ---------HWQIPLGRRFRALKLWMTLRS-YGLKGLQA 156 (764)
Q Consensus 101 ~~~y-~---s--------~ll~rd-~~~l~-~~~s~~~d~~---------d~tle~SRr~~ALklWatL~~-lG~eGy~~ 156 (764)
...+ . + ++..+. .+.+- ..+...+-+. .....++-..........+.. .+.+-+++
T Consensus 178 ~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 257 (349)
T PRK07908 178 ADAVPGEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAHWPVGTLQLEAIAACCAPRAVAEAAA 257 (349)
T ss_pred hhhccCCccccccccCCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCCCCCccHHHHHHHHHHhcccchHHHHH
Confidence 2111 1 1 111110 00000 0000000000 000000001111122222221 23344566
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEecee
Q psy13453 157 YLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSF 236 (764)
Q Consensus 157 ~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l 236 (764)
+.++..+..+++.+.|+++ ++++..++..+.+.++.. + ...+.+.|.+.|..+......
T Consensus 258 ~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~~~~~~~~----------------~----~~~~~~~l~~~gI~v~~g~~f 316 (349)
T PRK07908 258 DAARLAADRAEMVAGLRAV-GARVVDPAAAPFVLVRVP----------------D----AELLRKRLRERGIAVRRGDTF 316 (349)
T ss_pred HHHHHHHHHHHHHHHHHhC-CcEeccCCCceEEEEECC----------------c----HHHHHHHHHhCCEEEEECCCC
Confidence 6777777888899999987 788776666666655432 1 246778888888866554443
Q ss_pred C--CeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 237 Q--DRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 237 ~--g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
. +..++|+++. ++++++.+++.|+++.
T Consensus 317 ~~~~~~~vRis~~----~~~~~~~l~~al~~~~ 345 (349)
T PRK07908 317 PGLDPDYLRLAVR----PRAEVPVLVQALAEIL 345 (349)
T ss_pred CCCCCCeEEEEeC----CCccHHHHHHHHHHHH
Confidence 2 3579999984 4668888888887763
No 410
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=97.26 E-value=0.016 Score=66.47 Aligned_cols=176 Identities=15% Similarity=0.029 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+....++.+.|++++..... ....|+.+|||||..|++.||... .+ +-+|.....-
T Consensus 98 ~~~~~~la~~l~~~~p~~~~--------~~v~f~~sGseA~e~AlklAr~~t-gr---------------~~ii~~~~~y 153 (443)
T PRK06058 98 YEGYVAVAEQLNRLTPGDHE--------KRSALFNSGAEAVENAVKIARSYT-GR---------------QAVVVFDHAY 153 (443)
T ss_pred CHHHHHHHHHHHHhCCCCCC--------CEEEEeCCcHHHHHHHHHHHHHhh-CC---------------CeEEEECCCc
Confidence 34555677788887743210 135789999999999999998752 11 1244555556
Q ss_pred chhHHHHHHhCCC-------------ceEEEecCCCCc------ccH-HHHHHHHHHhhh--cCCCceEEEEeeccCCcc
Q psy13453 641 NSSVEKSAIIGDV-------------PVRQLRSDDNGV------LRG-DALLTAVKEDLA--KGLIPCCLIATLGTTGTC 698 (764)
Q Consensus 641 H~Sv~kAa~~lGl-------------~v~~Vp~d~~g~------md~-~~Le~~I~~~~~--~G~~p~~VvataGTT~~G 698 (764)
|-...-+..+.+. .+..+|.....+ .+. +.+++.++...+ .+..+.+|+.---....|
T Consensus 154 HG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG 233 (443)
T PRK06058 154 HGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGG 233 (443)
T ss_pred CcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCC
Confidence 6554444433221 234444321111 111 222222221111 123355555444333345
Q ss_pred cccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 699 AFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 699 aiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
.+-| +++|+++|++||+.|++|-.+.|+-..-..+....-|+ ..|-+++. |.++.-+..|++
T Consensus 234 ~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv-~PDiv~~g--K~l~~G~Pi~av 299 (443)
T PRK06058 234 FIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGI-VPDLITTA--KGIAGGLPLSAV 299 (443)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCC-CCCEEEEc--ccccCCCccEEE
Confidence 5533 99999999999999999999887533222222223355 46888884 877654545554
No 411
>PRK07678 aminotransferase; Validated
Probab=97.25 E-value=0.023 Score=65.40 Aligned_cols=170 Identities=12% Similarity=0.052 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
..+.++.+.|+++++... ...|+.+|||||..|+++||.....+ +..+ ++-+|.....-|
T Consensus 89 ~~~~~lae~l~~~~~~~~----------~v~f~~sGseA~e~AlklAr~~t~~~-g~~~---------r~~ii~~~~~yH 148 (451)
T PRK07678 89 EPAIKLAEKLNEWLGGEY----------VIFFSNSGSEANETAFKIARQYHAQK-GEPH---------RYKFISRYRAYH 148 (451)
T ss_pred HHHHHHHHHHHHhCCCCC----------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC---------CcEEEEECCCcC
Confidence 445567777777765422 36899999999999999999864221 1000 122333444445
Q ss_pred hhHHHHHHhCCC------------ceEEEecCCCCcc---------c---HHHHHHHHHHhhhcCCCceEEEEeeccCCc
Q psy13453 642 SSVEKSAIIGDV------------PVRQLRSDDNGVL---------R---GDALLTAVKEDLAKGLIPCCLIATLGTTGT 697 (764)
Q Consensus 642 ~Sv~kAa~~lGl------------~v~~Vp~d~~g~m---------d---~~~Le~~I~~~~~~G~~p~~VvataGTT~~ 697 (764)
=.-.-+....|. .+..+|.....+. | .+.+++.|+.. .+..+.+|++---....
T Consensus 149 G~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPiqg~g 226 (451)
T PRK07678 149 GNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWE--LSETIAAVIMEPIITGG 226 (451)
T ss_pred CccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCC
Confidence 333333322211 2344443322221 1 23355556421 12345555554333345
Q ss_pred ccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC
Q psy13453 698 CAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 698 GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~ 756 (764)
|.+-| +++++++|++||+.|++|-.+.|+-....-+....-|+ ..|-+++ -|.++.
T Consensus 227 G~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv-~PDivt~--gK~lgg 286 (451)
T PRK07678 227 GVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGV-KPDIITM--AKGITS 286 (451)
T ss_pred CcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCC-CCCEEEe--eccccc
Confidence 66644 89999999999999999999876533221111112366 5787776 676553
No 412
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=97.24 E-value=0.003 Score=69.29 Aligned_cols=140 Identities=11% Similarity=-0.053 Sum_probs=91.8
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
.+.+.+++.+|.+ ..++|+|++++....+. ..+ +..|++.+-+.....
T Consensus 53 ~Lr~~ia~~~~~~-----------~I~it~Gs~~al~~~~~-----~~~----------------gd~v~v~~P~y~~~~ 100 (330)
T PRK05664 53 GLEAAARAYYGAP-----------QLLPVAGSQAAIQALPR-----LRA----------------PGRVGVLSPCYAEHA 100 (330)
T ss_pred HHHHHHHHHhCCC-----------CEEECcCHHHHHHHHHH-----ccC----------------CCEEEEcCCChHHHH
Confidence 4466777777742 47889999998655421 111 124667777888888
Q ss_pred HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHHHHHHHhcCCEEEEecc
Q psy13453 646 KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEELGPICQEYNIWLHVDAA 722 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eIa~i~~~~glwLHVDaA 722 (764)
.+++.+|++++.||.+ ++++.+.+ +-+|+.+..++.||.+=+ +.+|+++|+++++|+.+|-+
T Consensus 101 ~~~~~~g~~~~~v~~~--------~~~~~~~~-------~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~ 165 (330)
T PRK05664 101 HAWRRAGHQVRELDEA--------EVEAALDS-------LDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEA 165 (330)
T ss_pred HHHHHcCCeEEEechh--------hHhhhhcC-------CCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECC
Confidence 8999999999999864 35555421 125666778899998855 66666778899999999999
Q ss_pred ccccccccchhhhhhcCCCccc--EEEEcCCccCCCC
Q psy13453 723 YAGSALLLPEYAHLKRGLEYVD--SFDFNTHKWLLVN 757 (764)
Q Consensus 723 ~Gg~~l~~~~~r~~l~gie~aD--Sit~d~HK~l~~P 757 (764)
|..+. ..+. +..+..-| -+.-++.|.++.|
T Consensus 166 y~~~~-~~~s----~~~~~~~~~vi~~~SfSK~~gl~ 197 (330)
T PRK05664 166 FMDNT-PQHS----LAACAHRPGLIVLRSFGKFFGLA 197 (330)
T ss_pred cccCC-Cccc----ccccccCCCEEEEeeccccccCC
Confidence 96432 1011 11111111 4577889988744
No 413
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=97.19 E-value=0.005 Score=68.60 Aligned_cols=127 Identities=16% Similarity=0.114 Sum_probs=92.6
Q ss_pred HHHHHHHHHcC-CCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 566 LVMNWLGKALG-LPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 566 ~v~~~la~llG-~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
++.+.+++.+| .+.+ ..+.+.|++|.+-..+.+.+. ++..++++.-+-..-
T Consensus 61 ~l~~a~a~~~~~~~~~---------~V~~gnGsde~i~~l~~~~~~-------------------~gd~vl~~~Ptf~~Y 112 (356)
T COG0079 61 ELRAALAEYYGVVDPE---------NVLVGNGSDELIELLVRAFVE-------------------PGDTVLIPEPTFSMY 112 (356)
T ss_pred HHHHHHHHHhCCCCcc---------eEEEcCChHHHHHHHHHHhhc-------------------CCCEEEEcCCChHHH
Confidence 44556677777 4432 344567777765444433221 112355666666666
Q ss_pred HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc--CCEEEEecc
Q psy13453 645 EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY--NIWLHVDAA 722 (764)
Q Consensus 645 ~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~--glwLHVDaA 722 (764)
..+|...|..++.||.++ +++|++++.+++.++.+ +|+.+..++.||..-+.++|.++++.. +.++.||-|
T Consensus 113 ~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~~~~~------lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEA 185 (356)
T COG0079 113 EIAAQLAGAEVVKVPLKE-FRLDLDAILAAIRDKTK------LVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEA 185 (356)
T ss_pred HHHHHhcCCeEEEecccc-cccCHHHHHHhhhcCCC------EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCc
Confidence 778899999999999988 99999999999987433 888999999999998888888887754 889999999
Q ss_pred ccccc
Q psy13453 723 YAGSA 727 (764)
Q Consensus 723 ~Gg~~ 727 (764)
|.=+.
T Consensus 186 Y~eF~ 190 (356)
T COG0079 186 YIEFS 190 (356)
T ss_pred hhhcC
Confidence 87643
No 414
>PRK06225 aspartate aminotransferase; Provisional
Probab=97.19 E-value=0.013 Score=65.30 Aligned_cols=221 Identities=8% Similarity=-0.023 Sum_probs=119.2
Q ss_pred eeeHHHHHhhcCCCCCCeEEecCCC---CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc---cCchhhhc----
Q psy13453 21 IYESFKATHSLSGTPDQVRLSGLPD---SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI---QSLNAPVS---- 90 (764)
Q Consensus 21 ~YSv~KAa~~LGl~~~~v~~Vpvd~---~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i---Dpi~~ia~---- 90 (764)
++...+++..+|... +.||++. ++++|+++|++.+.+. +-+++.+-++.++|.+ +++.++++
T Consensus 117 y~~~~~~~~~~g~~~---~~v~~~~~~~~~~~d~~~l~~~~~~~-----~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~ 188 (380)
T PRK06225 117 YLIIDNFASRFGAEV---IEVPIYSEECNYKLTPELVKENMDEN-----TRLIYLIDPLNPLGSSYTEEEIKEFAEIARD 188 (380)
T ss_pred CcchHHHHHHhCceE---EeeccccccCCccCCHHHHHhhcCCC-----ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 345567888899876 8899852 4689999999988653 2244455677789986 45666665
Q ss_pred -CCCceeccccc-----ccc------ce-eeeecCCCccc-ccccccc-----c----cCCcccCCCCcccHHHH---HH
Q psy13453 91 -NGPLKVGGVLR-----RVY------SS-CLVPRGQKSLR-TTVLFHF-----L----FQHWQIPLGRRFRALKL---WM 144 (764)
Q Consensus 91 -~~wlHVDa~l~-----~~y------~s-~ll~rd~~~l~-~~~s~~~-----d----~~d~tle~SRr~~ALkl---Wa 144 (764)
++++.+|.... +.. .. +.+..-.+.+. ..+...+ + +.... ..+.+...+.. ..
T Consensus 189 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~~-~~~~~~~~~~~~~a~~ 267 (380)
T PRK06225 189 NDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSIV-INDLGTNVIAQEAAIA 267 (380)
T ss_pred CCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecCHHHHHHHHHHH-hcccCCCHHHHHHHHH
Confidence 88888988531 000 00 00000011110 0000000 0 00000 01122223322 22
Q ss_pred HHHHccHHHHHHHHHHH-HHHHHHHHHHHhcCCCeEEe-CCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHH
Q psy13453 145 TLRSYGLKGLQAYLRKH-ISLAKKFADLVEQDDRFELV-CPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDR 222 (764)
Q Consensus 145 tL~~lG~eGy~~~i~~~-i~lA~~l~~~I~~~p~~ell-~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~ 222 (764)
.|.. . +.|.+.+++. -+..+.+.+.+++++++.+. .++.-+.+.+.+.+. +.+ ..++.++
T Consensus 268 ~l~~-~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~--------------~~~--~~~l~~~ 329 (380)
T PRK06225 268 GLKV-K-DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEA--------------GID--PEDLVEY 329 (380)
T ss_pred HHhc-c-hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccc--------------cCC--HHHHHHH
Confidence 2222 1 3333444333 34466777888887776543 334444444443221 111 1467888
Q ss_pred HHhcCcEEEEece---eCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 223 IIARKVIYIVKGS---FQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 223 L~~~G~~~vs~t~---l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
|.+.|........ -.+..++|+++.. ++++++.+++.|+++.+++.
T Consensus 330 l~~~gi~v~~g~~~~~~~~~~~iR~s~~~---~~e~l~~~~~~l~~~~~~~~ 378 (380)
T PRK06225 330 LLERKIFVRQGTYTSKRFGDRYIRVSFSI---PREQVEVFCEEFPDVVETLR 378 (380)
T ss_pred HHHCCEEEcCCcccCcCCCCceEEEEeCC---CHHHHHHHHHHHHHHHHHhh
Confidence 8888875433211 1235689999764 58999999999999887664
No 415
>PRK07481 hypothetical protein; Provisional
Probab=97.17 E-value=0.024 Score=65.14 Aligned_cols=175 Identities=10% Similarity=-0.028 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+..+.++.+.|+++++- ... ....|+++|||||-.|+++||...... +..+ ++-+|.....-
T Consensus 85 ~~~~~~lae~L~~~~~~-~~~-------~~v~f~~sGsEAve~AlklAr~~~~~~-g~~~---------r~~ii~~~~~y 146 (449)
T PRK07481 85 HPRAIELSYELIDMFAP-EGM-------RRVFFSSGGSDSVETALKLARQYWKVR-GQPE---------RTKFISLKQGY 146 (449)
T ss_pred CHHHHHHHHHHHHhcCC-CCC-------CEEEEcCchHHHHHHHHHHHHHHHHhc-CCCC---------CcEEEEECCCc
Confidence 34556677778887742 110 246899999999999999999864221 1000 12234444445
Q ss_pred chhHHHHHHhCC------------CceEEEecCCCCc-----ccHHHHHHHHHHh----h--hcCCCceEEEEeeccCCc
Q psy13453 641 NSSVEKSAIIGD------------VPVRQLRSDDNGV-----LRGDALLTAVKED----L--AKGLIPCCLIATLGTTGT 697 (764)
Q Consensus 641 H~Sv~kAa~~lG------------l~v~~Vp~d~~g~-----md~~~Le~~I~~~----~--~~G~~p~~VvataGTT~~ 697 (764)
|=.-.-+..+.| -.+..++.....+ -|++.+++.+.+. . ..+..+.+|++---....
T Consensus 147 HG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~g 226 (449)
T PRK07481 147 HGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAG 226 (449)
T ss_pred CCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCc
Confidence 533222222211 1234443321111 1444443332211 1 122345566655444445
Q ss_pred ccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC
Q psy13453 698 CAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 698 GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~ 756 (764)
|.+-+ +++++++|++||+.|++|-.+.|+-....-+....-|+ ..|-+++ -|.++.
T Consensus 227 G~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~g 286 (449)
T PRK07481 227 GVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGV-KPDIMCL--AKGITS 286 (449)
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCC-CCCEEEE--eecccC
Confidence 65544 99999999999999999999877533222112222355 4787776 566553
No 416
>KOG0053|consensus
Probab=97.17 E-value=0.0028 Score=70.69 Aligned_cols=99 Identities=15% Similarity=0.117 Sum_probs=79.2
Q ss_pred cchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEE
Q psy13453 640 SNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHV 719 (764)
Q Consensus 640 aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHV 719 (764)
+|.-+.+-...+|+....|.+++ ++.+++++++.+ -+|-.=..++.+..+-||++|+++|+++|+.+.|
T Consensus 129 T~~~l~~~~~~~gie~~~vd~~~-----~~~~~~~i~~~t------~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvV 197 (409)
T KOG0053|consen 129 TLRILRKFLPKFGGEGDFVDVDD-----LKKILKAIKENT------KAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVV 197 (409)
T ss_pred HHHHHHHHHHHhCceeeeechhh-----HHHHHHhhccCc------eEEEEECCCCCccccccHHHHHHHHhhCCCEEEE
Confidence 34445666667888888887764 777888887743 4888899999999999999999999999999999
Q ss_pred eccccccccccchhhhhhcCCCc-ccEEEEcCCccCCCC
Q psy13453 720 DAAYAGSALLLPEYAHLKRGLEY-VDSFDFNTHKWLLVN 757 (764)
Q Consensus 720 DaA~Gg~~l~~~~~r~~l~gie~-aDSit~d~HK~l~~P 757 (764)
|..+|+....- .+.. ||-++=+.-||++.-
T Consensus 198 DnTf~~p~~~~--------pL~lGADIV~hSaTKyi~Gh 228 (409)
T KOG0053|consen 198 DNTFGSPYNQD--------PLPLGADIVVHSATKYIGGH 228 (409)
T ss_pred eCCcCcccccC--------hhhcCCCEEEEeeeeeecCC
Confidence 99999963222 2334 899999999998753
No 417
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=97.16 E-value=0.017 Score=65.22 Aligned_cols=219 Identities=10% Similarity=-0.012 Sum_probs=117.8
Q ss_pred eeHHHHHhhcCCCCCCeEEecCC--CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc---cCchhhhc-----C
Q psy13453 22 YESFKATHSLSGTPDQVRLSGLP--DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI---QSLNAPVS-----N 91 (764)
Q Consensus 22 YSv~KAa~~LGl~~~~v~~Vpvd--~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i---Dpi~~ia~-----~ 91 (764)
..+..++..+|+.. +.+|++ +++.+|+++|++++.++ +.+++-+.++.++|.+ ++++++.+ +
T Consensus 131 ~~~~~~~~~~g~~~---~~~~~~~~~~~~~d~~~l~~~~~~~-----~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~ 202 (403)
T TIGR01265 131 PLYDTRAAFSGLEV---RLYDLLPEKDWEIDLDGLEALADEK-----TVAIVVINPSNPCGSVFSRDHLQKIAEVARKLG 202 (403)
T ss_pred hhHHHHHHHcCCEE---EEecCCcccCCccCHHHHHHHhCcC-----ccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCC
Confidence 34567888899877 888885 36789999999988653 2344556678899988 44666654 8
Q ss_pred CCceeccccccc-cc-----eee-eecCCCc-cccccccccccCCcccCCCC----------------------------
Q psy13453 92 GPLKVGGVLRRV-YS-----SCL-VPRGQKS-LRTTVLFHFLFQHWQIPLGR---------------------------- 135 (764)
Q Consensus 92 ~wlHVDa~l~~~-y~-----s~l-l~rd~~~-l~~~~s~~~d~~d~tle~SR---------------------------- 135 (764)
+|+++|...... |. ++. +..+... .-.+||-. |.+.|-|
T Consensus 203 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~-----~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~ 277 (403)
T TIGR01265 203 IPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKR-----WVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQRI 277 (403)
T ss_pred CEEEEEccccccccCCCCccchhhhccCCcEEEEeecccc-----cCCCcceEEEEEEeCchhhhHHHHHHHHHHHhhhh
Confidence 899999964211 11 100 0000000 00011100 1111111
Q ss_pred -cccHHHHHHHHHHc--cHHHH-HHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEE-EEeeccccccccccccCccC
Q psy13453 136 -RFRALKLWMTLRSY--GLKGL-QAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVC-FRLKVRFWDKLDNLFGTISF 210 (764)
Q Consensus 136 -r~~ALklWatL~~l--G~eGy-~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~-Fry~P~~~~~~~~~~~~~~~ 210 (764)
....+..-+....+ +.++| ++..++..+..+++.+.|++++++.+.. |+-+... ++.. .... ..
T Consensus 278 ~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-p~~g~f~~~~~~-~~~~---------~~ 346 (403)
T TIGR01265 278 LGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPK-PEGAMYLMVKLE-LELF---------PE 346 (403)
T ss_pred cCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecC-CCceeEEEEecc-cccc---------CC
Confidence 11112111111111 33343 3445556666778888998887876443 4434333 3322 1100 00
Q ss_pred CccHHHHHHHHHH-HhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 211 GDNDLNKAVYDRI-IARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 211 ~~d~~n~~L~~~L-~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
..+ ..++.++| .+.|..+..........++|+++..+ ++.+++.++.|.++.++
T Consensus 347 ~~~--~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~~---~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 347 IKD--DVDFCEKLVREESVICLPGSAFGLPNWVRITITVP---ESMLEEACSRIKEFCER 401 (403)
T ss_pred CCC--HHHHHHHHHHhCCEEEeCccccCCCCeEEEEecCC---HHHHHHHHHHHHHHHHh
Confidence 001 24566665 45687665444444467899999864 66788887777766543
No 418
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=97.16 E-value=0.038 Score=63.75 Aligned_cols=184 Identities=12% Similarity=-0.024 Sum_probs=99.6
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhc--------cCCCC-Cccc-
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQ--------SKNPS-LTEN- 626 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~--------~~~~~-~~~~- 626 (764)
.+....+.+.+.+.+++++. ... ....|+++|||||-.|++.||.......+ +++.+ ++..
T Consensus 100 ~~~~~~la~~l~~~l~~~~p--~~~-------~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~ 170 (464)
T TIGR00699 100 NFPSKDWAKILKEGILKVAP--KGQ-------DQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQA 170 (464)
T ss_pred cHHHHHHHHHHHHhHHhhCC--CCc-------CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccc
Confidence 33444555555555555652 110 24689999999999999999976421100 00000 0000
Q ss_pred cccC-ceEEEecCCcchhHHHHHHhCCC-----------ceEEEecCC-CC-------------cccHHHHHHHHHHhhh
Q psy13453 627 DIRN-KLVAYTSDQSNSSVEKSAIIGDV-----------PVRQLRSDD-NG-------------VLRGDALLTAVKEDLA 680 (764)
Q Consensus 627 ~~~~-~~vi~~S~~aH~Sv~kAa~~lGl-----------~v~~Vp~d~-~g-------------~md~~~Le~~I~~~~~ 680 (764)
...+ .-+|.....-|=...-+..+.|- .+..+|... .. .-+++.|++.|++.
T Consensus 171 ~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~-- 248 (464)
T TIGR00699 171 PGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKW-- 248 (464)
T ss_pred cCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhc--
Confidence 0011 13555566667555555444332 122333221 00 01356677777532
Q ss_pred cCCCceEEEEeeccCCcccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCC-cccEEEEcCCccC
Q psy13453 681 KGLIPCCLIATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE-YVDSFDFNTHKWL 754 (764)
Q Consensus 681 ~G~~p~~VvataGTT~~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie-~aDSit~d~HK~l 754 (764)
+....+|++---....|.+-+ +++|+++|++||+.|++|-.+.|+-....-+....-|++ +.|-+++ -|.+
T Consensus 249 -~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~--gK~l 324 (464)
T TIGR00699 249 -HKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTF--SKKF 324 (464)
T ss_pred -CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEe--hhhh
Confidence 223556665544455577777 999999999999999999998765322211122223554 5777665 5655
No 419
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=97.15 E-value=0.0036 Score=66.48 Aligned_cols=187 Identities=13% Similarity=0.076 Sum_probs=110.7
Q ss_pred HHHHHHHHh-hcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhh
Q psy13453 538 IVGDMLSGA-FGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHW 616 (764)
Q Consensus 538 ~lad~l~~~-lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~ 616 (764)
..++++++. +-.+...|+....-+.+-..+..++.+-+||.-+- -...+|.|+..+-++....- ...
T Consensus 53 ~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~-------~NIalTnGSQs~fFYlfNlF-----~G~ 120 (417)
T COG3977 53 LLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITA-------QNIALTNGSQSAFFYLFNLF-----AGR 120 (417)
T ss_pred HHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCcc-------ceeeecCCccchHHHHHHHh-----cCc
Confidence 456666665 44556777777777888889999999999997642 34667887777766654421 111
Q ss_pred ccCCCCCccccccCceEEEecCCcchhHHHHHHhCCC------------ceEEEecC-CCCcccHHHHHHHHHHhhhcCC
Q psy13453 617 QSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDV------------PVRQLRSD-DNGVLRGDALLTAVKEDLAKGL 683 (764)
Q Consensus 617 ~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl------------~v~~Vp~d-~~g~md~~~Le~~I~~~~~~G~ 683 (764)
..+ +..++ |+.+=.-.|- .+.++ ++..+|.. -..+.|.++|+- .+.
T Consensus 121 ~sd-------G~~k~--illPLaPeYi-----GY~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i--~e~----- 179 (417)
T COG3977 121 RSD-------GTEKK--ILLPLAPEYI-----GYADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLHI--GES----- 179 (417)
T ss_pred cCC-------Cccee--EeeccChhhc-----cccccccCccceeeccCCcccccccceeeccCHHHccc--ccc-----
Confidence 111 11111 1111110000 01111 11222211 245678888763 233
Q ss_pred CceEEEEeeccCCcccc---ccHHHHHHHHHhcCCEEEEeccccccc---cccchhhhhh-cCCCcccEEEEcCCccCCC
Q psy13453 684 IPCCLIATLGTTGTCAF---DNLEELGPICQEYNIWLHVDAAYAGSA---LLLPEYAHLK-RGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 684 ~p~~VvataGTT~~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~~---l~~~~~r~~l-~gie~aDSit~d~HK~l~~ 756 (764)
.-+||++-.|+.||.+ +.+.+|.++|++||++|.+|-|||-.+ .+++ ..... ..+ -.++|..|.+.-
T Consensus 180 -~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd-~~~~w~~Ni----ilC~SLSK~GLP 253 (417)
T COG3977 180 -TGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSD-ATPLWNENI----ILCMSLSKLGLP 253 (417)
T ss_pred -cceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceeccc-ccccCCCCE----EEEeehhhcCCC
Confidence 3499999999999988 577888889999999999999999753 2221 11111 112 457788886654
Q ss_pred CcCceee
Q psy13453 757 NFDCSAM 763 (764)
Q Consensus 757 P~~~g~l 763 (764)
---||++
T Consensus 254 G~R~GIi 260 (417)
T COG3977 254 GSRCGII 260 (417)
T ss_pred CcceeEE
Confidence 4456654
No 420
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=97.15 E-value=0.026 Score=64.79 Aligned_cols=174 Identities=16% Similarity=0.037 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+..+.++.+.|++++.-... ....|+.+|||||..|+++||.... + +.+|.....-
T Consensus 84 ~~~~~~lae~L~~~~p~~~~--------~~v~f~~SGseA~e~AiklAr~~tg-r---------------~~ii~~~~~Y 139 (445)
T PRK08593 84 HEPLVRLAKKLCELAPGDFE--------KRVTFGLSGSDANDGIIKFARAYTG-R---------------PYIISFTNAY 139 (445)
T ss_pred CHHHHHHHHHHHHhCCCCCC--------CEEEECCchHHHHHHHHHHHHHhhC-C---------------CeEEEECCCc
Confidence 34555666777777632100 1468999999999999999987521 1 1234444555
Q ss_pred chhHHHHHHhCCC-------------ceEEEecCCCCc-----ccH-------HHHHHHHHHhhhcCCCceEEEEeeccC
Q psy13453 641 NSSVEKSAIIGDV-------------PVRQLRSDDNGV-----LRG-------DALLTAVKEDLAKGLIPCCLIATLGTT 695 (764)
Q Consensus 641 H~Sv~kAa~~lGl-------------~v~~Vp~d~~g~-----md~-------~~Le~~I~~~~~~G~~p~~VvataGTT 695 (764)
|=...-+..+.+. .+..+|..+..+ -+. +++++.+++... +....+|+.---..
T Consensus 140 HG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~iAavI~EPv~g 218 (445)
T PRK08593 140 HGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLP-ADEVACIVIETIQG 218 (445)
T ss_pred CCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcC-CCceEEEEEccccC
Confidence 6444434333221 244555432111 112 334444432111 12344555544444
Q ss_pred Ccccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCcee
Q psy13453 696 GTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSA 762 (764)
Q Consensus 696 ~~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~ 762 (764)
..|.+-| +++|+++|++||++|++|-++.|+-....-+....-|+ ..|.+++ -|.++.-+..|+
T Consensus 219 ~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv-~pDi~t~--gK~l~~G~p~ga 286 (445)
T PRK08593 219 DGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNI-TPDLMSF--GKSLAGGMPMSA 286 (445)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCC-CCCEeee--cccccCCcccEE
Confidence 5577766 99999999999999999999866422111111111255 4676654 666653233443
No 421
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=97.14 E-value=0.018 Score=63.74 Aligned_cols=179 Identities=16% Similarity=0.035 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+....++.++|.++++-.- ....|+.+||+||-.|++.||..+...... .++.++.....-
T Consensus 58 ~~~~~~la~~L~~~~p~~~---------~~v~f~~sGseAve~Alkla~~~~~~~~~~----------~r~~il~~~~~y 118 (339)
T PF00202_consen 58 HPEAAELAEKLAELFPGGL---------DRVFFANSGSEAVEAALKLARQYHNKRAYT----------GRRKILAFEGSY 118 (339)
T ss_dssp EHHHHHHHHHHHHHSSTTE---------EEEEEESSHHHHHHHHHHHHHHHHHHTHHH----------TTTEEEEETTTB
T ss_pred ccchhhhhhhhhhcccccc---------ceeeeccCchHHHHHHHHHhhccccccccc----------CCceEEEeeeee
Confidence 3445567778888883221 357899999999999999999432221110 112345555566
Q ss_pred chhHHHHHHhCC------------CceEEEecCCCCc-----ccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---
Q psy13453 641 NSSVEKSAIIGD------------VPVRQLRSDDNGV-----LRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF--- 700 (764)
Q Consensus 641 H~Sv~kAa~~lG------------l~v~~Vp~d~~g~-----md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai--- 700 (764)
|-...-+..+.+ ..+..+|...... -..+.+++.+.+... ....+|+.--.....|.+
T Consensus 119 HG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~iaavivEPi~g~~G~~~~~ 196 (339)
T PF00202_consen 119 HGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNA--DEIAAVIVEPIQGEGGMIPPP 196 (339)
T ss_dssp -TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHG--GGEEEEEEESSBTTTTSBEE-
T ss_pred eccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcC--CcEEEEEEeccccccCccccc
Confidence 644444444321 1467788754222 112234444433222 224555555555555654
Q ss_pred -ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 701 -DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 701 -Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+=+++|.++|++||+.|.+|=.+.|+.....-+.....|+ ..|-+++. |.++.-+..|++
T Consensus 197 ~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~p~sav 257 (339)
T PF00202_consen 197 PEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGV-DPDIVTFG--KGLGGGLPISAV 257 (339)
T ss_dssp TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTS-SSSEEEEE--GGGGTTSSEEEE
T ss_pred cchhhehcccccccccceecccccccccccCCccceecccc-cCcccccc--cchhhhhhcccc
Confidence 3479999999999999999999888644333333333566 57999997 776655555554
No 422
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=97.14 E-value=0.004 Score=69.42 Aligned_cols=192 Identities=11% Similarity=-0.044 Sum_probs=115.6
Q ss_pred cccccCCCCCh-HHHHHHHHHHhhcccC------ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCCh
Q psy13453 525 FNAYFPTGSSY-PSIVGDMLSGAFGLIG------FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTA 597 (764)
Q Consensus 525 ~~~~~~~~~~~-~~~lad~l~~~lN~n~------~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGg 597 (764)
.+.|.+++... ..++-.+-.+.+|.+. -...-+|.+.++-.++.+.|+++|+.|+++ .--++++||
T Consensus 5 ~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y-------~Vlfl~Ggg 77 (364)
T PRK12462 5 QLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEY-------GVVFLQGGS 77 (364)
T ss_pred cceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCC-------eEEEEeccH
Confidence 45666665544 4566666667766433 233457889999999999999999998753 223455667
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCCCccccccCce-EEEecCCcchhHHHHHHhCCCceEEEecCC----CCcccHHHHH
Q psy13453 598 SEATLVSILVAKRKMINHWQSKNPSLTENDIRNKL-VAYTSDQSNSSVEKSAIIGDVPVRQLRSDD----NGVLRGDALL 672 (764)
Q Consensus 598 TeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~-vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~----~g~md~~~Le 672 (764)
|.+.-.+++ ..+.+ + ...+ ++.+..-++-..+.|.++ | ++..+.... ..-.+++.+
T Consensus 78 T~~~ea~~~----Nll~~-----------g-~~~~~~~~tG~fg~r~~~ea~~~-g-~v~~~~~~~~~~~~~~p~~~~~- 138 (364)
T PRK12462 78 SLQFSMIPM----NFSRP-----------G-AAAPEYVTTGYWSRKAIGEASRV-A-AMRVVWDGAASGYRTLPSLAEL- 138 (364)
T ss_pred HHHHHHHHH----HcCCC-----------C-CcEEEEEeCCHHHHHHHHHHHhc-C-CceEecCcCCCCCCcCCCHHHh-
Confidence 776433332 11111 0 0012 333333334444444444 5 555443211 123455554
Q ss_pred HHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCc
Q psy13453 673 TAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHK 752 (764)
Q Consensus 673 ~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK 752 (764)
.+.++ .-+|..|...|.+|.--| ++.+.++..+.||+.-+.+...++ +++.|-|....+|
T Consensus 139 -~~~~d------~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid--------~~~~dvi~agsQK 198 (364)
T PRK12462 139 -DWDAR------APFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFD--------VEAYGMVYAHAQK 198 (364)
T ss_pred -ccCCC------CcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCC--------hHHccEEEeeccc
Confidence 12222 347999999999999876 444457899999997554433332 2233999999999
Q ss_pred cCCCCcCceee
Q psy13453 753 WLLVNFDCSAM 763 (764)
Q Consensus 753 ~l~~P~~~g~l 763 (764)
.++ |-|.+++
T Consensus 199 nlg-P~Gltvv 208 (364)
T PRK12462 199 NLG-PAGVTVA 208 (364)
T ss_pred cCC-CCceEEE
Confidence 999 8888875
No 423
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=97.13 E-value=0.018 Score=64.49 Aligned_cols=215 Identities=8% Similarity=-0.043 Sum_probs=123.0
Q ss_pred ee-HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc----CCCcee
Q psy13453 22 YE-SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS----NGPLKV 96 (764)
Q Consensus 22 YS-v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~----~~wlHV 96 (764)
|+ ....++..|+.. +.+|+++++.+|+++|++++... ++-+++-+-++.++|.+=|.+++.+ .+|+.+
T Consensus 137 y~~y~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~~~~~----~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~~~vi~ 209 (380)
T PLN03026 137 FGMYVFDAAVNGAEV---IKVPRTPDFSLDVPRIVEAVETH----KPKLLFLTSPNNPDGSIISDDDLLKILELPILVVL 209 (380)
T ss_pred hHHHHHHHHHcCCEE---EEeecCCCCCcCHHHHHHHHhcc----CCcEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEEE
Confidence 44 344677888887 88999888999999999998421 1224544569999999977777554 467888
Q ss_pred ccccccc-c-cee--eeecCCCc-cccccccccc---------cCCc-------ccCCCCcccHHHHHHHHHHccHHH-H
Q psy13453 97 GGVLRRV-Y-SSC--LVPRGQKS-LRTTVLFHFL---------FQHW-------QIPLGRRFRALKLWMTLRSYGLKG-L 154 (764)
Q Consensus 97 Da~l~~~-y-~s~--ll~rd~~~-l~~~~s~~~d---------~~d~-------tle~SRr~~ALklWatL~~lG~eG-y 154 (764)
|.+.... + .+. .+...... .-.+|+=.+. .+.. .....-....+...++...+-... +
T Consensus 210 DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i~~l~~~~~~~~~~~~~q~aa~~aL~~~~~~ 289 (380)
T PLN03026 210 DEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALSNPKYL 289 (380)
T ss_pred ECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCHHHHHHHHHhcCCCCCCHHHHHHHHHHhhCHHHH
Confidence 8864211 0 110 00000000 0011110000 0000 000011233445555555553334 3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEec
Q psy13453 155 QAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKG 234 (764)
Q Consensus 155 ~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t 234 (764)
++..++..+..+++.+.|++++.+++ .++..+-+.++..+ ..+ ..++.++|.+.|..+...+
T Consensus 290 ~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~---------------~~~--~~~~~~~l~~~gI~v~~~~ 351 (380)
T PLN03026 290 EDVKNALVEERERLFGLLKEVPFLEP-YPSDANFILCRVTS---------------GRD--AKKLKEDLAKMGVMVRHYN 351 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEEEECCC---------------CCC--HHHHHHHHHHCCeEEEECC
Confidence 45556667777788899998865554 45555555555321 111 2467888888898654433
Q ss_pred eeCCeeEEEEeccCCCCCHHHHHHHHHHHHH
Q psy13453 235 SFQDRLFMRFAICSSQTEESDVQLGWNEIRT 265 (764)
Q Consensus 235 ~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~ 265 (764)
.-.+..++|+++. ++++.+.+++.+++
T Consensus 352 ~~~~~~~lRis~~----~~~~~~~l~~al~~ 378 (380)
T PLN03026 352 SKELKGYIRVSVG----KPEHTDALMEALKQ 378 (380)
T ss_pred CCCCCCEEEEecC----CHHHHHHHHHHHHH
Confidence 3233568999988 46688888887765
No 424
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=97.13 E-value=0.016 Score=64.07 Aligned_cols=211 Identities=12% Similarity=0.042 Sum_probs=124.7
Q ss_pred eeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCcee
Q psy13453 22 YESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKV 96 (764)
Q Consensus 22 YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHV 96 (764)
..+..+++..|+.. +.+|+++++.+|+++|++++.+. ++-+++-+-+..++|.+=+.+++.+ +.++.+
T Consensus 116 ~~~~~~~~~~g~~~---~~i~~~~~~~~d~~~l~~~~~~~----~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~ 188 (356)
T PRK04870 116 VMYRMSAKLAGLEF---VGVPLTADFTLDLPAMLAAIAEH----RPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVV 188 (356)
T ss_pred HHHHHHHHHcCCEE---EEecCCCCCCCCHHHHHHHhhcC----CCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEE
Confidence 35567888999887 99999988999999999999742 1224444568999999977666443 677888
Q ss_pred ccccccc-cceee--eecCCCcc-ccccc--------cccc---------cCCcccCCCCcccHHHHHHHHHHcc-HHHH
Q psy13453 97 GGVLRRV-YSSCL--VPRGQKSL-RTTVL--------FHFL---------FQHWQIPLGRRFRALKLWMTLRSYG-LKGL 154 (764)
Q Consensus 97 Da~l~~~-y~s~l--l~rd~~~l-~~~~s--------~~~d---------~~d~tle~SRr~~ALklWatL~~lG-~eGy 154 (764)
|.+.... +.++. +......+ -.+|+ ..+- +....... ....+..+++...+- .+-+
T Consensus 189 De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~GlRiG~~i~~~~~i~~~~~~~~~~--~~~~~~q~~a~~~l~~~~~~ 266 (356)
T PRK04870 189 DEAYQPFAGDSWLPRLARFPNLLVMRTVSKLGLAGLRLGYLAGHPAWIAELDKVRPPY--NVNVLTQATALFALEHVDVL 266 (356)
T ss_pred ECCchhhcCcchHHHHhhCCCEEEEecchhhhhHHHhhhhhhCCHHHHHHHHHccCCC--cCCHHHHHHHHHHHhCHHHH
Confidence 8753211 10100 00000000 00011 0000 00000000 122233333222221 2347
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEec
Q psy13453 155 QAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKG 234 (764)
Q Consensus 155 ~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t 234 (764)
++..++..+..+++.+.+++.+++.+ .++..+.+.++.. + ..++.+.|.+.|.......
T Consensus 267 ~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~------------------~--~~~~~~~l~~~gI~v~~~~ 325 (356)
T PRK04870 267 DAQAAQLRAERTRLAAALAALPGVTV-FPSAANFILVRVP------------------D--AAAVFDGLKTRGVLVKNLS 325 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcEE-CCCCCeEEEEECC------------------C--HHHHHHHHHHCCEEEEECC
Confidence 77778888888899999999888865 4555554444321 0 1467788888998765544
Q ss_pred eeC--CeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 235 SFQ--DRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 235 ~l~--g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
... +..++|+++. +.++.+.|++.|+++
T Consensus 326 ~f~~~~~~~iRis~~----~~~~~~~l~~al~~~ 355 (356)
T PRK04870 326 GMHPLLANCLRVTVG----TPEENAQFLAALKAA 355 (356)
T ss_pred CCCCCCCCeEEEeCC----CHHHHHHHHHHHHHh
Confidence 432 3568999887 577889998888764
No 425
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=97.12 E-value=0.016 Score=65.96 Aligned_cols=98 Identities=14% Similarity=0.137 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC-CCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEE
Q psy13453 153 GLQAYLRKHISLAKKFADLVEQDDRFELVCP-PSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYI 231 (764)
Q Consensus 153 Gy~~~i~~~i~lA~~l~~~I~~~p~~ell~~-P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~v 231 (764)
+..++.++..+++++|++.|++. +|.++.+ .+..++.+.+.. .+.-...+.++|.+.|....
T Consensus 283 ~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~t~i~~v~~~~----------------~~~~~~~~~~~L~~~GI~v~ 345 (416)
T PRK13034 283 EFKTYAKQVIANAQALAEVLKER-GYDLVSGGTDNHLLLVDLRP----------------KGLSGKDAEQALERAGITVN 345 (416)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCCCcEEEEEcCC----------------CCCCHHHHHHHHHhCCcEEe
Confidence 44566789999999999999987 9998753 456665554321 11112456678888886432
Q ss_pred EeceeC-------CeeEEEEecc---CCCCCHHHHHHHHHHHHHHHH
Q psy13453 232 VKGSFQ-------DRLFMRFAIC---SSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 232 s~t~l~-------g~~~LRi~v~---np~Tt~e~i~~~l~~l~~~~~ 268 (764)
...+. .+..||+++. .-..+++|++.+++.|.++..
T Consensus 346 -~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 346 -KNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred -ccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 21111 1457998642 225568999999999988854
No 426
>PRK07036 hypothetical protein; Provisional
Probab=97.11 E-value=0.037 Score=63.97 Aligned_cols=172 Identities=15% Similarity=0.048 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+..+.++.+.|.+++.-+- ....|+.+|||||..|++.||.....+ +.. .++-++.....-
T Consensus 94 ~~~~~~lae~L~~~~p~~~---------~~v~f~~sGseAve~AlklAr~~~~~~-g~t---------~r~~Ii~~~~~Y 154 (466)
T PRK07036 94 NAPAAELAAKLAELAPGDL---------NHVFLTTGGSTAVDSALRFVHYYFNVR-GRP---------AKKHIITRGDAY 154 (466)
T ss_pred CHHHHHHHHHHHHhCCCCc---------CEEEEeCCchHHHHHHHHHHHHHHHhc-CCC---------CccEEEEEcCcc
Confidence 4556667777777753211 246899999999999999998754221 100 012234444444
Q ss_pred chhHHHHHHhCCC------------ceEEEecCCC----Ccc--------cHHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 641 NSSVEKSAIIGDV------------PVRQLRSDDN----GVL--------RGDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 641 H~Sv~kAa~~lGl------------~v~~Vp~d~~----g~m--------d~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
|=...-+..+.|- .+..+|.... ..+ ..+.+++.|.. ..+..+.+|++---...
T Consensus 155 HG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~iAavi~EPv~g~ 232 (466)
T PRK07036 155 HGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILS--LGADNIAAFIAEPILGS 232 (466)
T ss_pred CCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHH--cCCCceEEEEEeCCcCC
Confidence 5333223222221 2444443211 111 13445555543 12334666666655555
Q ss_pred cccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhh-hcCCCcccEEEEcCCccCCC
Q psy13453 697 TCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHL-KRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 697 ~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~-l~gie~aDSit~d~HK~l~~ 756 (764)
.|.+-| +++|.++|++||+.|++|-.+.|+-....-+... .-|+ ..|-+++ -|.++.
T Consensus 233 gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv-~PDivt~--gK~l~g 294 (466)
T PRK07036 233 GGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGI-QPDIITF--AKGLTS 294 (466)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCC-CCCEEEE--cccccc
Confidence 677766 9999999999999999999987652222111111 1255 4676666 576654
No 427
>PRK06105 aminotransferase; Provisional
Probab=97.11 E-value=0.017 Score=66.55 Aligned_cols=171 Identities=12% Similarity=0.009 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+..+.++.+.|++++..+- ....|+.+|||||-.|++.||.....+ +.. .++-++.....-
T Consensus 91 ~~~~~~lae~L~~~~p~~~---------~~v~f~~SGseAve~AlKlar~~~~~~-g~t---------~r~~il~~~~~y 151 (460)
T PRK06105 91 HGPVIDLAEKLVAMAPVPM---------SKVFFTNSGSEANDTVVKLVWYYNNAL-GRP---------EKKKIISRQRGY 151 (460)
T ss_pred CHHHHHHHHHHHHhCCCCC---------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCC---------CCcEEEEecCcc
Confidence 4455566777777764221 246899999999999999998653211 100 012244445555
Q ss_pred chhHHHHHHhCCC------------ceEEEecCCCCc-------------ccHHHHHHHHHHhhhcCCCceEEEEeeccC
Q psy13453 641 NSSVEKSAIIGDV------------PVRQLRSDDNGV-------------LRGDALLTAVKEDLAKGLIPCCLIATLGTT 695 (764)
Q Consensus 641 H~Sv~kAa~~lGl------------~v~~Vp~d~~g~-------------md~~~Le~~I~~~~~~G~~p~~VvataGTT 695 (764)
|=...-+..+.|. .+..+|.....+ -..++|++.|... ....+.+|++=--..
T Consensus 152 HG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iAavIvEPiqg 229 (460)
T PRK06105 152 HGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAE--GPDTIAAFIGEPVMG 229 (460)
T ss_pred CCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEccccC
Confidence 5444333332221 233343221111 1246677776532 122355555544344
Q ss_pred Ccccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCC
Q psy13453 696 GTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLL 755 (764)
Q Consensus 696 ~~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~ 755 (764)
..|.+-+ +++++++|++||+.|++|-.+.|+-....-+.....|+ ..|-+++ -|.++
T Consensus 230 ~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v-~PDi~~~--gK~lg 290 (460)
T PRK06105 230 AGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGI-KPDILVM--SKQLS 290 (460)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCC-CCCeeee--ecccc
Confidence 4566666 99999999999999999999866433222222222355 3675554 46554
No 428
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=97.11 E-value=0.035 Score=64.02 Aligned_cols=173 Identities=14% Similarity=0.001 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
..+.++.+.|++++..+. ....|+.+|||||-.|++.||... .+ +.+|.....-|
T Consensus 96 ~~~~~lae~L~~~~p~~~---------~~v~f~~SGsEA~e~AlklAr~~t-gr---------------~~ii~~~~~yH 150 (457)
T PRK05639 96 ERAIRVAEKLAEISPIEN---------PKVLFGLSGSDAVDMAIKVSKFST-RR---------------PWILAFIGAYH 150 (457)
T ss_pred HHHHHHHHHHHhhCCCCc---------CEEEEeCchHHHHHHHHHHHHHhc-CC---------------CeEEEECCCcC
Confidence 344456677777764321 246899999999999999999652 11 12344444555
Q ss_pred hhHHHHHHhCC--------C-----ceEEEecCCCCc--------ccHH--------HHHHHHHHhhhcCCCceEEEEee
Q psy13453 642 SSVEKSAIIGD--------V-----PVRQLRSDDNGV--------LRGD--------ALLTAVKEDLAKGLIPCCLIATL 692 (764)
Q Consensus 642 ~Sv~kAa~~lG--------l-----~v~~Vp~d~~g~--------md~~--------~Le~~I~~~~~~G~~p~~Vvata 692 (764)
=...-+..+.| . ++..+|.....+ -|.+ .|++.|......+....+|+.--
T Consensus 151 G~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EP 230 (457)
T PRK05639 151 GQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEP 230 (457)
T ss_pred CccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECC
Confidence 43333333322 1 245555432111 1222 34444322111123455555444
Q ss_pred ccCCcccc----ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCcee
Q psy13453 693 GTTGTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSA 762 (764)
Q Consensus 693 GTT~~Gai----Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~ 762 (764)
-....|.+ +=+++|.++|++||+.|++|-++.|+-....-+....-|+ ..|-++ +-|.++.-++.|+
T Consensus 231 iqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~--~gK~l~gG~pi~a 301 (457)
T PRK05639 231 IQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEV-KPDLII--FGKGVASGMGLSG 301 (457)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCC-CCCEEE--echhhcCCCccee
Confidence 33334544 3488999999999999999999887422221112223366 578777 5787764444444
No 429
>PRK07480 putative aminotransferase; Validated
Probab=97.08 E-value=0.015 Score=66.89 Aligned_cols=171 Identities=13% Similarity=0.071 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+..+.++.+.|++++.-+- ....|+.+|||||..|+++||.....+ +.. .++.+|.....-
T Consensus 93 ~~~~~~lae~L~~~~p~~~---------~~v~f~~SGseA~e~AlklAr~~~~~~-g~~---------~r~~ii~~~~~y 153 (456)
T PRK07480 93 HPPAIELAAKLAEVAPPGF---------NHVFFTNSGSEANDTVLRMVRHYWALK-GKP---------QKKVIISRKNGY 153 (456)
T ss_pred CHHHHHHHHHHHHhCCCCc---------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCC---------CCcEEEEECCCc
Confidence 3455556777777763211 246899999999999999999864221 100 012233334444
Q ss_pred chhHHHHHHhCCC------------ceEEEecCCCC----ccc--------HHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 641 NSSVEKSAIIGDV------------PVRQLRSDDNG----VLR--------GDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 641 H~Sv~kAa~~lGl------------~v~~Vp~d~~g----~md--------~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
|=...-+..+.|. .+..+|..... ..+ .++|++.+.+. .+..+.+|++---...
T Consensus 154 HG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~vAAvi~EPiqg~ 231 (456)
T PRK07480 154 HGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILEL--GADNVAAFIGEPIQGA 231 (456)
T ss_pred CCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCC
Confidence 5333222222221 23333321100 011 35666555432 1223445544333334
Q ss_pred cccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCC
Q psy13453 697 TCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLL 755 (764)
Q Consensus 697 ~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~ 755 (764)
.|.+-+ +++|+++|++||+.|++|-.+.|+-....-+....-|+ ..|-+++ -|.++
T Consensus 232 gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~ 291 (456)
T PRK07480 232 GGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGI-KPDLMTI--AKGLT 291 (456)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCC-CCCeeee--ehhhc
Confidence 466655 99999999999999999999877532222222222355 4676655 67554
No 430
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=97.07 E-value=0.019 Score=62.82 Aligned_cols=213 Identities=11% Similarity=-0.014 Sum_probs=121.5
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
.|.+...++.+.|... +.+|. +|+++|++.+++... .++-+++.....+++|.+.|++++.+ ++++
T Consensus 109 ~~~~~~~~~~~~g~~~---~~~~~-----~d~~~l~~~~~~~~~-~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~l 179 (360)
T TIGR00858 109 NHASLIDGCRLSGARV---RRYRH-----NDVEHLERLLEKNRG-ERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWL 179 (360)
T ss_pred ccHHHHHHHHhcCCce---EEecC-----CCHHHHHHHHHHccc-CCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEE
Confidence 5778888888888776 66663 689999999975321 11223343335678999999999886 8889
Q ss_pred eeccccccc-cc----eee-ee---cCCC-----cccccccc--cc-----c--------cCCcccCCCC-cccHHHHHH
Q psy13453 95 KVGGVLRRV-YS----SCL-VP---RGQK-----SLRTTVLF--HF-----L--------FQHWQIPLGR-RFRALKLWM 144 (764)
Q Consensus 95 HVDa~l~~~-y~----s~l-l~---rd~~-----~l~~~~s~--~~-----d--------~~d~tle~SR-r~~ALklWa 144 (764)
.+|...... +. +.+ +. .+.. ++...|.. .+ + ...+...++- ......+.+
T Consensus 180 i~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 259 (360)
T TIGR00858 180 MVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYGAYVAGSQALIDYLINRARTLIFSTALPPAVAAAALA 259 (360)
T ss_pred EEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHH
Confidence 999864211 10 000 00 0000 00000000 00 0 0111222222 111223344
Q ss_pred HHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHH
Q psy13453 145 TLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRII 224 (764)
Q Consensus 145 tL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~ 224 (764)
++..+- ...++.++..+..+++.+.|++. ++++. ++..+.+.|++.+ . .-..++.++|.
T Consensus 260 al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~---------------~--~~~~~~~~~l~ 318 (360)
T TIGR00858 260 ALELIQ--EEPWRREKLLALIARLRAGLEAL-GFTLM-PSCTPIVPVIIGD---------------N--ASALALAEELQ 318 (360)
T ss_pred HHHHHh--hCHHHHHHHHHHHHHHHHHHHHc-CCccC-CCCCCEEEEEeCC---------------H--HHHHHHHHHHH
Confidence 454332 23567788889999999999986 57754 4556666665421 0 11257888898
Q ss_pred hcCcEEEEece---eCCeeEEEEeccCCCCCHHHHHHHHHHH
Q psy13453 225 ARKVIYIVKGS---FQDRLFMRFAICSSQTEESDVQLGWNEI 263 (764)
Q Consensus 225 ~~G~~~vs~t~---l~g~~~LRi~v~np~Tt~e~i~~~l~~l 263 (764)
+.|........ ..+..++|+++... .++++++.+++.|
T Consensus 319 ~~gI~v~~~~~~~~~~~~~~iRis~~~~-~~~~~i~~~l~~l 359 (360)
T TIGR00858 319 QQGIFVGAIRPPTVPAGTSRLRLTLSAA-HTPGDIDRLAEAL 359 (360)
T ss_pred HCCeeEeeeCCCCCCCCCceEEEEEcCC-CCHHHHHHHHHhh
Confidence 88875543211 13456899976644 4688999998865
No 431
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=97.07 E-value=0.028 Score=64.10 Aligned_cols=172 Identities=13% Similarity=0.008 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
.+.++.+.|++++..+. ...-.|+.+|||||-.|++.||... .+ +-++.....-|=
T Consensus 84 ~~~~la~~l~~~~p~~~--------~~~~~f~~sGseA~e~AlklAr~~t-gr---------------~~ii~~~~~yHG 139 (421)
T PRK06777 84 SYVTLAERINALAPIDG--------PAKTAFFTTGAEAVENAVKIARAYT-GR---------------PGVIAFGGAFHG 139 (421)
T ss_pred HHHHHHHHHHHhCCCCC--------CceEEEeCCcHHHHHHHHHHHHHhh-CC---------------CeEEEEcCCcCC
Confidence 34456677777764211 0246899999999999999998752 11 113334444453
Q ss_pred hHHHHHHhCCC-------------ceEEEecCCCC-----cccHHHHHHHHHHhhhcCCCceEEEEeeccCCccc----c
Q psy13453 643 SVEKSAIIGDV-------------PVRQLRSDDNG-----VLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCA----F 700 (764)
Q Consensus 643 Sv~kAa~~lGl-------------~v~~Vp~d~~g-----~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Ga----i 700 (764)
...-+..+.|. .+..+|..+.. .-+++.+++.+++.. .+..+.+|+.---....|. -
T Consensus 140 ~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~-~~~~iaavi~Epv~~~~G~~~~~~ 218 (421)
T PRK06777 140 RTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADI-APDQVAAILLEPIQGEGGFNVAPP 218 (421)
T ss_pred ccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCH
Confidence 33333322221 12333332111 124667787775421 1223445544433333342 2
Q ss_pred ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCcee
Q psy13453 701 DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSA 762 (764)
Q Consensus 701 Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~ 762 (764)
+-+++|.++|++||++|++|-.|.|.-....-+....-|+ ..|-++ +-|.++.-+..|+
T Consensus 219 ~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~pDiv~--~sK~l~~G~piga 277 (421)
T PRK06777 219 EFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDV-KPDLIT--MAKSLGGGMPISA 277 (421)
T ss_pred HHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCC-CCCEEe--eehhhcCCCceEE
Confidence 3499999999999999999999987422211111111243 457554 6787763333444
No 432
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=97.07 E-value=0.033 Score=61.59 Aligned_cols=211 Identities=9% Similarity=0.053 Sum_probs=120.9
Q ss_pred HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceecc
Q psy13453 24 SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGG 98 (764)
Q Consensus 24 v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa 98 (764)
...+++.+|... +.||+++++.+|+++|++++.+. ++-+++-+-++-++|.+=+.+++.+ +.++=+|.
T Consensus 113 ~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~~~~~----~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe 185 (351)
T PRK14807 113 YSVYSKIAGAVE---IPVKLKEDYTYDVGSFIKVIEKY----QPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDE 185 (351)
T ss_pred HHHHHHHcCCeE---EEeecCCCCCCCHHHHHHHhhcc----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeC
Confidence 455678899877 89999988999999999998742 1224544568999999988777654 44454555
Q ss_pred ccccccc----e-------eeeec-CCCccc-cccccccccCCc-------ccCCCCcccHHHHHHHHHHccHHHHHHHH
Q psy13453 99 VLRRVYS----S-------CLVPR-GQKSLR-TTVLFHFLFQHW-------QIPLGRRFRALKLWMTLRSYGLKGLQAYL 158 (764)
Q Consensus 99 ~l~~~y~----s-------~ll~r-d~~~l~-~~~s~~~d~~d~-------tle~SRr~~ALklWatL~~lG~eGy~~~i 158 (764)
.....+. + .+..+ -.+.+- ..+...+-.+.. .+........+..++....+-...+.+.+
T Consensus 186 ~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 265 (351)
T PRK14807 186 AYFEFYGNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKSPYNINSLSQVIALKVLRTGVLKERV 265 (351)
T ss_pred cchhhcccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHccCCCCcCHHHHHHHHHHHhHHHHHHHH
Confidence 4311111 0 00000 000000 000000000000 00001123344445555555444567777
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEece-eC
Q psy13453 159 RKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGS-FQ 237 (764)
Q Consensus 159 ~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~-l~ 237 (764)
++..+..+++.+.+++.+++.+ .++.-+-+..++. + ..++.+.|.+.|..+..... ..
T Consensus 266 ~~~~~~r~~l~~~l~~~~g~~~-~~~~~~~~~i~~~----------------~----~~~~~~~l~~~gV~v~~~~~~~~ 324 (351)
T PRK14807 266 NYILNERERLIKELSKIPGIKV-YPSKTNFILVKFK----------------D----ADYVYQGLLERGILVRDFSKVEG 324 (351)
T ss_pred HHHHHHHHHHHHHHHhCCCcEE-CcCCccEEEEEcC----------------C----HHHHHHHHHHCCEEEEECCCCCC
Confidence 8888888889999988888875 4555443333321 1 24678888888976543321 12
Q ss_pred CeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 238 DRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 238 g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
...++|+++++ +++.+.|++.|+++
T Consensus 325 ~~~~iRis~~~----~~~~~~l~~~l~~~ 349 (351)
T PRK14807 325 LEGALRITVSS----CEANDYLINGLKEL 349 (351)
T ss_pred CCCeEEEEcCC----HHHHHHHHHHHHHh
Confidence 35689999875 45677888877654
No 433
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=97.06 E-value=0.0092 Score=68.28 Aligned_cols=165 Identities=15% Similarity=0.000 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+..+.++.+.|.++++... ....|+.+||||+..|++.||.... + +.++.....-
T Consensus 92 ~~~~~~la~~L~~~~~~~~---------~~v~f~~SGsEA~e~AiklAr~~tg-r---------------~~ii~~~~~y 146 (433)
T PRK00615 92 SEQEILFAEELFSYLGLED---------HKIRFVSSGTEATMTAVRLARGITG-R---------------SIIIKFLGCY 146 (433)
T ss_pred CHHHHHHHHHHHHhCCCCc---------CEEEEeCchHHHHHHHHHHHHHhhC-C---------------CEEEEEcCcc
Confidence 4456677888888875321 2468999999999999999997521 1 1122222222
Q ss_pred chhH---HHHHHhCCC----------------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc
Q psy13453 641 NSSV---EKSAIIGDV----------------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD 701 (764)
Q Consensus 641 H~Sv---~kAa~~lGl----------------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD 701 (764)
|=.. .-+....+- ....+|- -|+++|++.+++.. ..+.+|+.---....|.+-
T Consensus 147 HG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~---~~~aavI~Epv~~~~G~~~ 218 (433)
T PRK00615 147 HGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPY-----NDFQIFQTVMNSLG---HRVAGVIFEPICANMGVVL 218 (433)
T ss_pred CCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCC-----CCHHHHHHHHHhcC---CceEEEEECCCCCCCCccc
Confidence 2211 001111100 0011111 16889999886432 2344555544444456665
Q ss_pred c----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCcee
Q psy13453 702 N----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSA 762 (764)
Q Consensus 702 p----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~ 762 (764)
| +++|.++|++||+.|++|-++.|+ ..-..+....-|+ ..|-++ +-|.++.-+.+|+
T Consensus 219 p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv-~PDi~~--~gK~lggG~p~~a 279 (433)
T PRK00615 219 PKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHV-KPDITV--YGKILGGGLPAAA 279 (433)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCC-CCCeEE--EcccccCCcceee
Confidence 5 459999999999999999999654 3222222222355 467665 5787764333443
No 434
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=97.06 E-value=0.014 Score=64.74 Aligned_cols=209 Identities=8% Similarity=0.004 Sum_probs=121.3
Q ss_pred HHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-------CCCceeccc
Q psy13453 27 ATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-------NGPLKVGGV 99 (764)
Q Consensus 27 Aa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-------~~wlHVDa~ 99 (764)
+++.+|... +.+|++ ++.+|+++|++++++. +-+++-+-++.++|.+=|.+++.+ ++|+.+|..
T Consensus 124 ~~~~~g~~~---~~~~~~-~~~~~~~~l~~~~~~~-----~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~ 194 (367)
T PRK02731 124 AAQAVGAKP---VEVPAK-DYGHDLDAMLAAVTPR-----TRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEA 194 (367)
T ss_pred HHHHcCCeE---EEeccc-CCCCCHHHHHHHhCCC-----CcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECc
Confidence 467778766 888884 5889999999998632 224444678899999987777554 578888885
Q ss_pred ccc-c-----cceeeeec-CCCcc-ccccc---------cccccCCc-------ccCCCCcccHHHHHHHHHHccHHH-H
Q psy13453 100 LRR-V-----YSSCLVPR-GQKSL-RTTVL---------FHFLFQHW-------QIPLGRRFRALKLWMTLRSYGLKG-L 154 (764)
Q Consensus 100 l~~-~-----y~s~ll~r-d~~~l-~~~~s---------~~~d~~d~-------tle~SRr~~ALklWatL~~lG~eG-y 154 (764)
... . ..++-+.. ....+ -.+|+ ..+-+.+. .+...-....+..+++...+-.+. +
T Consensus 195 y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~~ 274 (367)
T PRK02731 195 YAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPEIIDALNRVRQPFNVNSLALAAAVAALDDDAFV 274 (367)
T ss_pred HHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCHHHHHHHHHccCCCCCCHHHHHHHHHHhCCHHHH
Confidence 310 0 00000000 00000 00111 00000000 000000223456677766665444 4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEec
Q psy13453 155 QAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKG 234 (764)
Q Consensus 155 ~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t 234 (764)
++..++.-+..+++.+.+++. ++.+. ++..+.+.++.. . ..+ ..++.++|.+.|..+....
T Consensus 275 ~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~i~~~-~--------------~~~--~~~~~~~L~~~gI~v~~~~ 335 (367)
T PRK02731 275 EKSRALNAEGMAWLTEFLAEL-GLEYI-PSVGNFILVDFD-D--------------GKD--AAEAYQALLKRGVIVRPVA 335 (367)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCccC-CCCceEEEEECC-C--------------CCC--HHHHHHHHHHCCEEEEeCC
Confidence 555666667778888888887 77654 556666667652 1 111 2467888888887655443
Q ss_pred eeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 235 SFQDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 235 ~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
......++|+++. +.++++.+++.|+++.
T Consensus 336 ~~~~~~~iRis~~----~~~e~~~l~~aL~~~~ 364 (367)
T PRK02731 336 GYGLPNALRITIG----TEEENRRFLAALKEFL 364 (367)
T ss_pred CCCCCCeEEEecC----CHHHHHHHHHHHHHHH
Confidence 3333468999874 5788999999988764
No 435
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=97.05 E-value=0.037 Score=63.48 Aligned_cols=177 Identities=13% Similarity=0.013 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEE-eCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGII-QSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~Gvf-TsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
+....++.+.|++++..+.. ...-+| +++|||||-.|++.||... . ++-+|.....
T Consensus 81 ~~~~~~lae~L~~~~p~~~~-------~~~~~f~~~sGsEA~e~AlklAr~~t-g---------------r~~Ii~~~~~ 137 (442)
T TIGR00709 81 TPLKDAFIEALLNIIPKRKM-------DYKLQFPGPSGADAVEAAIKLAKTYT-G---------------RTNVISFSGG 137 (442)
T ss_pred cHHHHHHHHHHHHhCCCcCC-------CccEEEeCCCHHHHHHHHHHHHHHhc-C---------------CCeEEEEcCC
Confidence 45556677788887642210 012244 5899999999999999762 1 0224556666
Q ss_pred cchhHHHHHHhCC------------CceEEEecCCCCcc--------cHHH----HHHHHHHhhhcCCCceEEEEeeccC
Q psy13453 640 SNSSVEKSAIIGD------------VPVRQLRSDDNGVL--------RGDA----LLTAVKEDLAKGLIPCCLIATLGTT 695 (764)
Q Consensus 640 aH~Sv~kAa~~lG------------l~v~~Vp~d~~g~m--------d~~~----Le~~I~~~~~~G~~p~~VvataGTT 695 (764)
-|=...-+..+.| ..+..+|.....+. +.+. +++.+.+.........+|++---..
T Consensus 138 yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g 217 (442)
T TIGR00709 138 FHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQG 217 (442)
T ss_pred cCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccC
Confidence 6655444444332 12444544322222 2222 3333322111112344444433333
Q ss_pred Ccccc----ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 696 GTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 696 ~~Gai----Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+.|.+ +=+++|+++|++||++|+.|-.+.|+-....-+....-|+ ..|-+++ -|.++.-+..|++
T Consensus 218 ~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~~G~Pigav 286 (442)
T TIGR00709 218 EGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGI-EPDFVVM--SKAVGGGLPLAVL 286 (442)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCC-CCcEEEE--cccccCCcccEEE
Confidence 33443 4689999999999999999999887543222222222355 4687774 6766544444443
No 436
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.04 E-value=0.037 Score=63.77 Aligned_cols=169 Identities=15% Similarity=0.116 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+.|+++++-+- ....|+.+|||||-.|++.||.....+ +..+ ++-+|.....-|
T Consensus 97 ~~~~~lAe~L~~~~p~~~---------~~v~f~~sGseAve~AlKlA~~~~~~r-g~~~---------r~~Ii~~~~~yH 157 (453)
T PRK06943 97 EPAIELAERLAALTGGTL---------GHAFFASDGASAVEIALKMSFHAWRNR-GRGD---------KREFVCLANGYH 157 (453)
T ss_pred HHHHHHHHHHHHhCCCCC---------CEEEEeCCCHHHHHHHHHHHHHHHHHh-CCCC---------CCEEEEECCCcC
Confidence 455567777777764321 246899999999999999998765322 1000 122444455555
Q ss_pred hhHHHHHHhCCC------------ceEEEecCCCCc------------ccHHHHHHHHHHhhhcCCCceEEEEeec-cCC
Q psy13453 642 SSVEKSAIIGDV------------PVRQLRSDDNGV------------LRGDALLTAVKEDLAKGLIPCCLIATLG-TTG 696 (764)
Q Consensus 642 ~Sv~kAa~~lGl------------~v~~Vp~d~~g~------------md~~~Le~~I~~~~~~G~~p~~VvataG-TT~ 696 (764)
=...-+..+.|- .+..+|.....+ =++++|++.|.. .+..+.+|++--. ...
T Consensus 158 G~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAviiEPvvqg~ 234 (453)
T PRK06943 158 GETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAE---RAGKIAALIVEPLVQCA 234 (453)
T ss_pred CCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEecccccc
Confidence 433333332221 233444321111 134677777753 2234555554321 222
Q ss_pred cccc----ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCC
Q psy13453 697 TCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLL 755 (764)
Q Consensus 697 ~Gai----Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~ 755 (764)
.|.+ +=++++.++|++||+.|++|-.+.|+-....-+....-|+ ..|-+++ -|.++
T Consensus 235 gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv-~PDivt~--gKgl~ 294 (453)
T PRK06943 235 AGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGV-WPDFLCL--SKGIS 294 (453)
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCC-CCCeEee--ehhhc
Confidence 3433 4688999999999999999999877533222222222355 4777777 45444
No 437
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=97.03 E-value=0.032 Score=63.04 Aligned_cols=218 Identities=10% Similarity=0.030 Sum_probs=125.0
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
.|-|+..++...|... +.+|. .|++.+++.++... +..+-+ +-.....++|.+-|++++.+ +++
T Consensus 140 ~H~s~~~~~~~~g~~~---~~~~~-----~d~~~l~~~l~~~~--~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~ 209 (406)
T PRK13393 140 NHASMIEGIRHSRAEK---RIFRH-----NDPADLERKLSDLD--PHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAM 209 (406)
T ss_pred hhHHHHHHHHHcCCeE---EEeCC-----CCHHHHHHHHHhcc--CCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCE
Confidence 6888888888877543 56654 37888888886431 112334 45556778899999999876 788
Q ss_pred ceeccccc----cccceeeeec----C-CCcccccccc------cc--------c----cC-CcccCCCCc-ccHHHHHH
Q psy13453 94 LKVGGVLR----RVYSSCLVPR----G-QKSLRTTVLF------HF--------L----FQ-HWQIPLGRR-FRALKLWM 144 (764)
Q Consensus 94 lHVDa~l~----~~y~s~ll~r----d-~~~l~~~~s~------~~--------d----~~-d~tle~SRr-~~ALklWa 144 (764)
++||.... .+.+..++.. + ...+..+|+= .+ + +. .|....+.. ..+..+.+
T Consensus 210 livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~GG~~~~~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~a 289 (406)
T PRK13393 210 TYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMGGYITGSAALCDFIRSFASGFIFTTSLPPAVAAGALA 289 (406)
T ss_pred EEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccCceeeCCHHHHHHHHHhCcCceecCccCHHHHHHHHH
Confidence 99998753 1222111100 0 0111111110 00 0 00 011122222 22335566
Q ss_pred HHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHH
Q psy13453 145 TLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRII 224 (764)
Q Consensus 145 tL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~ 224 (764)
+|..+-..+. ..++..+++++|.+.+++. +++++ ++..+++.+... ......++.++|.
T Consensus 290 aL~~~~~~~~--~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~i~~v~~~-----------------~~~~~~~l~~~L~ 348 (406)
T PRK13393 290 SVRHLKASSA--ERERHQDRVARLRARLDKA-GIPHL-PNPSHIVPVMVG-----------------DPVLCKQISDELL 348 (406)
T ss_pred HHHHHhhCHH--HHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCeEEEEeC-----------------CHHHHHHHHHHHH
Confidence 6666533332 2355678888999999875 67655 455666666431 0112357888888
Q ss_pred hc-CcEEEEe---ceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 225 AR-KVIYIVK---GSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 225 ~~-G~~~vs~---t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
++ |.+.... +.-.+...+|+++ +...++++++.+++.|+++.++
T Consensus 349 ~~~Gi~v~~~~~p~~p~g~~~iRis~-~~~~t~edid~l~~~l~~~~~~ 396 (406)
T PRK13393 349 DRYGIYVQPINYPTVPRGTERLRITP-SPLHTDADIEHLVQALSEIWAR 396 (406)
T ss_pred HhCCEEEEeECCCCCCCCCceEEEEE-CCCCCHHHHHHHHHHHHHHHHh
Confidence 74 8654322 1223556899964 4455789999999999988654
No 438
>PLN02656 tyrosine transaminase
Probab=97.03 E-value=0.027 Score=63.82 Aligned_cols=226 Identities=6% Similarity=-0.098 Sum_probs=123.3
Q ss_pred eHHHHHhhcCCCCCCeEEecCC--CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc---cCchhhhc-----CC
Q psy13453 23 ESFKATHSLSGTPDQVRLSGLP--DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI---QSLNAPVS-----NG 92 (764)
Q Consensus 23 Sv~KAa~~LGl~~~~v~~Vpvd--~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i---Dpi~~ia~-----~~ 92 (764)
....++.+.|+.. +.+|++ +++.+|+++|++++++. +.+++-+-++-++|.+ +++.++++ ++
T Consensus 132 ~~~~~~~~~g~~~---~~i~~~~~~~~~~d~~~l~~~~~~~-----~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~ 203 (409)
T PLN02656 132 IYELCAAFRHLEV---RYVDLLPEKGWEVDLDAVEALADQN-----TVALVIINPGNPCGNVYSYQHLKKIAETAEKLKI 203 (409)
T ss_pred cHHHHHHHcCCEE---EEEeCCCcCCCCCCHHHHHHHhccC-----ceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 3456778889887 899985 35689999999988642 3455555578899998 66777665 78
Q ss_pred Cceeccccccc-c-----ceeeeecC-CCc-cccccccc---------cccC----------Cc----c-c-CCCCcccH
Q psy13453 93 PLKVGGVLRRV-Y-----SSCLVPRG-QKS-LRTTVLFH---------FLFQ----------HW----Q-I-PLGRRFRA 139 (764)
Q Consensus 93 wlHVDa~l~~~-y-----~s~ll~rd-~~~-l~~~~s~~---------~d~~----------d~----t-l-e~SRr~~A 139 (764)
|+.+|...... | .+...+.. ... .-.+||=. +-.. .. . . ........
T Consensus 204 ~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 283 (409)
T PLN02656 204 LVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDILGGPAT 283 (409)
T ss_pred EEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccccHHHHHHHHHHHhhhcCCCH
Confidence 99999853211 1 11000000 000 00011100 0000 00 0 0 00001233
Q ss_pred HHHHHHHHHc--c-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHH
Q psy13453 140 LKLWMTLRSY--G-LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLN 216 (764)
Q Consensus 140 LklWatL~~l--G-~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n 216 (764)
+..+++...+ + .+-+++..+..-+..+++.+.|++++++..+..|+-+..+|--.|.... .+...--
T Consensus 284 ~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~~----------~~~~~~~ 353 (409)
T PLN02656 284 FIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLL----------EDISDDI 353 (409)
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecchhhc----------CCCCCHH
Confidence 3444444444 2 2335555555556666788888887665444567666655522221000 0000001
Q ss_pred HHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 217 KAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 217 ~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
..+.+.+.+.|..+.-........++|++++. .++.+++.++.|+++.+.
T Consensus 354 ~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~---~~e~l~eal~rl~~~~~~ 403 (409)
T PLN02656 354 DFCFKLAREESVIILPGTAVGLKNWLRITFAA---DPSSLEEALGRIKSFYLR 403 (409)
T ss_pred HHHHHHHHhCCEEEecchhcCCCCeEEEEeCC---CHHHHHHHHHHHHHHHHH
Confidence 23456667778766655444446789999995 478888888888877654
No 439
>PRK08361 aspartate aminotransferase; Provisional
Probab=97.02 E-value=0.016 Score=65.01 Aligned_cols=217 Identities=10% Similarity=0.084 Sum_probs=121.2
Q ss_pred eeeHHHHHhhcCCCCCCeEEecCCC--CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc-----
Q psy13453 21 IYESFKATHSLSGTPDQVRLSGLPD--SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS----- 90 (764)
Q Consensus 21 ~YSv~KAa~~LGl~~~~v~~Vpvd~--~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~----- 90 (764)
+.++..++...|+.. +.+|+++ ++.+|+++|++++++. +.+++-+.++.++|.+=| +.++++
T Consensus 127 y~~~~~~~~~~g~~~---~~v~~~~~~~~~~d~~~l~~~i~~~-----~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~ 198 (391)
T PRK08361 127 FVCYVEDAKIAEAKP---IRIPLREENEFQPDPDELLELITKR-----TRMIVINYPNNPTGATLDKEVAKAIADIAEDY 198 (391)
T ss_pred CcccHHHHHHcCCEE---EEEecCCccCCCCCHHHHHHhcccc-----cEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHc
Confidence 456778888999876 9999975 4689999999998753 235555668999999988 556553
Q ss_pred CCCceeccccccc-c-----ceeeee-cCC----Cccccccc-----cccc------------cCCcccCCCCcccHHHH
Q psy13453 91 NGPLKVGGVLRRV-Y-----SSCLVP-RGQ----KSLRTTVL-----FHFL------------FQHWQIPLGRRFRALKL 142 (764)
Q Consensus 91 ~~wlHVDa~l~~~-y-----~s~ll~-rd~----~~l~~~~s-----~~~d------------~~d~tle~SRr~~ALkl 142 (764)
++++++|.+.... | .+..-. .+. .++...|. ..+- ...++.. ....+..
T Consensus 199 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~---~~~~~~q 275 (391)
T PRK08361 199 NIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIKLHAYIIG---NVASFVQ 275 (391)
T ss_pred CeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCHHHHHHHHHHHhhhcc---CCChHHH
Confidence 7899999854211 0 010000 000 00000000 0000 0000000 1122223
Q ss_pred HHHHHHc--cH--HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEE-EeeccccccccccccCccCCccHHHH
Q psy13453 143 WMTLRSY--GL--KGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCF-RLKVRFWDKLDNLFGTISFGDNDLNK 217 (764)
Q Consensus 143 WatL~~l--G~--eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~F-ry~P~~~~~~~~~~~~~~~~~d~~n~ 217 (764)
+++...+ |. +.++++.+..-+..+.+.+.+++.+++++ ..|+-+..+| +..+. ..+ ..
T Consensus 276 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~-~~p~g~~~~~~~l~~~--------------~~~--~~ 338 (391)
T PRK08361 276 IAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKV-FEPKGAFYVFANIDET--------------GMS--SE 338 (391)
T ss_pred HHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCee-cCCCEEEEEEEECCCC--------------CCC--HH
Confidence 3333333 21 23455555556667778899998888774 5566555444 33210 111 13
Q ss_pred HHHHHHHh-cCcEEEEecee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 218 AVYDRIIA-RKVIYIVKGSF--QDRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 218 ~L~~~L~~-~G~~~vs~t~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
++.++|.+ .|..+.....+ .+..++|++++. .+++++..++.|+++.+
T Consensus 339 ~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~---~~~~l~~al~~l~~~l~ 389 (391)
T PRK08361 339 DFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT---SKEKLIEAMERMEKALE 389 (391)
T ss_pred HHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC---CHHHHHHHHHHHHHHHh
Confidence 56666654 67755443332 345789999884 46678888777776543
No 440
>PRK07482 hypothetical protein; Provisional
Probab=97.01 E-value=0.032 Score=64.39 Aligned_cols=172 Identities=13% Similarity=-0.006 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+..+.++.+.|++++..+- ....|+.+|||||-.|++.||.....+ +.. .++-+|.....-
T Consensus 93 ~~~~~~lAe~L~~~~p~~~---------~~v~f~~sGSEAve~AlKlAr~~~~~~-g~~---------~r~~Ii~~~~~Y 153 (461)
T PRK07482 93 TEASITLSKRIIDRAPAGM---------SKVYYGLSGSDANETQIKLVWYYNNVL-GRP---------EKKKIISRWRGY 153 (461)
T ss_pred CHHHHHHHHHHHHhCCCCc---------CEEEEeCchHHHHHHHHHHHHHHHHhc-CCC---------CCceEEEecCcc
Confidence 4566667778888763111 235799999999999999999764221 100 012233334444
Q ss_pred chhHHHHHHhCC------------CceEEEecCCCCc-------------ccHHHHHHHHHHhhhcCCCceEEEEeeccC
Q psy13453 641 NSSVEKSAIIGD------------VPVRQLRSDDNGV-------------LRGDALLTAVKEDLAKGLIPCCLIATLGTT 695 (764)
Q Consensus 641 H~Sv~kAa~~lG------------l~v~~Vp~d~~g~-------------md~~~Le~~I~~~~~~G~~p~~VvataGTT 695 (764)
|=.-.-+..+.| -.+..+|.....+ -++++|++.|.+. .+..+.+|++---..
T Consensus 154 HG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPvqg 231 (461)
T PRK07482 154 HGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAE--GPDTIAAFIAEPVLG 231 (461)
T ss_pred CCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCcEEEEEECCccC
Confidence 432222222111 1234443321111 1467778777532 122345555443333
Q ss_pred Ccccc----ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC
Q psy13453 696 GTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 696 ~~Gai----Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~ 756 (764)
..|.+ +=+++|+++|++||+.|++|-.+.|+-....-+....-|+ ..|-+++ -|.++.
T Consensus 232 ~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~g 293 (461)
T PRK07482 232 TGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGI-EPDLITV--AKGLTS 293 (461)
T ss_pred CCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCC-CCCEEEE--cccccc
Confidence 33444 3588899999999999999999888644333223333466 4787776 566643
No 441
>PRK06149 hypothetical protein; Provisional
Probab=97.00 E-value=0.017 Score=72.65 Aligned_cols=173 Identities=12% Similarity=-0.029 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....+..+.|++++..+- ....|+++|||||..|++.||.... + +.+|.....-|
T Consensus 624 ~~~~elae~L~~~~p~~~---------~~v~f~~SGsEA~e~AlklAr~~tg-r---------------~~ii~~~~~yH 678 (972)
T PRK06149 624 AAVAEFSERLAALAPDGL---------DTVFLVNSGSEANDLAIRLAWAASG-R---------------RDVVSVLEAYH 678 (972)
T ss_pred HHHHHHHHHHHHhCCCCc---------CEEEEeCCchHHHHHHHHHHHHhcC-C---------------CeEEEEeCCCC
Confidence 344556667777762111 2468999999999999999997621 1 12444555555
Q ss_pred hhHHHHHHhC-----------CC--ceEEEecCCCCc-----cc-----HHHHHHHHHHhhhcCCCceEEEEeeccCCcc
Q psy13453 642 SSVEKSAIIG-----------DV--PVRQLRSDDNGV-----LR-----GDALLTAVKEDLAKGLIPCCLIATLGTTGTC 698 (764)
Q Consensus 642 ~Sv~kAa~~l-----------Gl--~v~~Vp~d~~g~-----md-----~~~Le~~I~~~~~~G~~p~~VvataGTT~~G 698 (764)
=...-+..+. .. .+..++.....+ -+ .+++++.++...+.+..+.+|++---....|
T Consensus 679 G~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG 758 (972)
T PRK06149 679 GWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAG 758 (972)
T ss_pred CcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCC
Confidence 2211111110 00 234444322111 12 3566666765444455566666544334457
Q ss_pred cccc----HHHHHHHHHhcCCEEEEeccccccccccchh-hhhhcCCCcccEEEEcCCccCCCCcCcee
Q psy13453 699 AFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEY-AHLKRGLEYVDSFDFNTHKWLLVNFDCSA 762 (764)
Q Consensus 699 aiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~-r~~l~gie~aDSit~d~HK~l~~P~~~g~ 762 (764)
.+-+ +++|.++|++||+.+++|-.+.|+-..-..+ ...-.|+ ..|-+|+ -|.++.-+..|+
T Consensus 759 ~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv-~PDivt~--gK~lg~G~Pl~a 824 (972)
T PRK06149 759 GIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGV-VPDIITM--AKGMGNGHPLGA 824 (972)
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCC-CCCEEEe--cccccCCeeeEE
Confidence 7777 9999999999999999999986542222111 1111355 4787755 676664333444
No 442
>KOG0258|consensus
Probab=96.96 E-value=0.011 Score=64.86 Aligned_cols=149 Identities=17% Similarity=0.139 Sum_probs=103.8
Q ss_pred cCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCcccccc
Q psy13453 550 IGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIR 629 (764)
Q Consensus 550 n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~ 629 (764)
..+.|..|.....+-+.|.+.+.+-=|.|.+ +.+.++|+|+|.|..+-|.+-... + ..
T Consensus 105 s~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~-------p~dI~LT~GAS~ai~~il~l~~~~--~---~~---------- 162 (475)
T KOG0258|consen 105 SLGAYSDSQGVPGVRKHVAEFIERRDGIPAD-------PEDIFLTTGASPAIRSILSLLIAG--K---KT---------- 162 (475)
T ss_pred cccccccccCChhHHHHHHHHHHhccCCCCC-------HHHeeecCCCcHHHHHHHHHHhcC--C---CC----------
Confidence 6678888888888888888888887786654 357889999999976655443221 1 11
Q ss_pred CceEEEecCCcchhHHHH-HHhCCCceE--EEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccH
Q psy13453 630 NKLVAYTSDQSNSSVEKS-AIIGDVPVR--QLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNL 703 (764)
Q Consensus 630 ~~~vi~~S~~aH~Sv~kA-a~~lGl~v~--~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl 703 (764)
. |+ ...-.|-...| ...+|...+ .+.-..+|.+|.++|++.+++.+ +|..|-++|+.-.-+.||.+ ..|
T Consensus 163 -G--vl-iPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~i 237 (475)
T KOG0258|consen 163 -G--VL-IPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEENI 237 (475)
T ss_pred -c--eE-eecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHHHH
Confidence 1 11 12333333333 344555433 33334689999999999999988 78777666666666778988 589
Q ss_pred HHHHHHHHhcCCEEEEeccccc
Q psy13453 704 EELGPICQEYNIWLHVDAAYAG 725 (764)
Q Consensus 704 ~eIa~i~~~~glwLHVDaA~Gg 725 (764)
++|..+|.++++.|.-|-.|=-
T Consensus 238 e~i~~fa~~~~l~llaDEVYQ~ 259 (475)
T KOG0258|consen 238 EGIICFAAEEGLVLLADEVYQD 259 (475)
T ss_pred HHHHHHHHHcCeEEechHHHHh
Confidence 9999999999999999987543
No 443
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=96.96 E-value=0.004 Score=69.52 Aligned_cols=154 Identities=18% Similarity=0.213 Sum_probs=92.6
Q ss_pred HHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceecccc
Q psy13453 26 KATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGGVL 100 (764)
Q Consensus 26 KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa~l 100 (764)
+.+..+|+.. +.++.+ |+++++++|++. +-+++...++.++|.+-|++++++ +++++||...
T Consensus 98 ~~~~~~g~~~---~~v~~~-----d~~~l~~~i~~~-----~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~ 164 (369)
T cd00614 98 RLLPKLGIEV---TFVDPD-----DPEALEAAIKPE-----TKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTF 164 (369)
T ss_pred HHHhhcCeEE---EEeCCC-----CHHHHHHhcCCC-----CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCC
Confidence 4455677655 677665 588999988642 224556778889999999999886 8899999964
Q ss_pred cccc-------c-eeeeecCCCcccc-------cccccc-c----cCCcccCCCCcccHHHHHHHHHHccHHHHHHHHHH
Q psy13453 101 RRVY-------S-SCLVPRGQKSLRT-------TVLFHF-L----FQHWQIPLGRRFRALKLWMTLRSYGLKGLQAYLRK 160 (764)
Q Consensus 101 ~~~y-------~-s~ll~rd~~~l~~-------~~s~~~-d----~~d~tle~SRr~~ALklWatL~~lG~eGy~~~i~~ 160 (764)
..++ + -+++..-.+.+.. .....- + ...+.-..+-....+..|+.++.+ +.+..++++
T Consensus 165 ~~~~~~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l--~tl~~r~~~ 242 (369)
T cd00614 165 ATPYLQRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGL--KTLPLRMER 242 (369)
T ss_pred cchhcCChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCC--CCHHHHHHH
Confidence 2111 0 0111111111110 000000 0 000000011123456677776655 567788999
Q ss_pred HHHHHHHHHHHHhcCCCeEEeCCC-----------------CceeEEEEee
Q psy13453 161 HISLAKKFADLVEQDDRFELVCPP-----------------SMGLVCFRLK 194 (764)
Q Consensus 161 ~i~lA~~l~~~I~~~p~~ell~~P-----------------~l~iV~Fry~ 194 (764)
..++|+++++.|+++|.++-+.-| .-++++|...
T Consensus 243 ~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~ 293 (369)
T cd00614 243 HSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELK 293 (369)
T ss_pred HHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeC
Confidence 999999999999999987655444 2567888764
No 444
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=96.95 E-value=0.02 Score=63.79 Aligned_cols=211 Identities=9% Similarity=-0.010 Sum_probs=116.2
Q ss_pred eHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-------CCCce
Q psy13453 23 ESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-------NGPLK 95 (764)
Q Consensus 23 Sv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-------~~wlH 95 (764)
.....++..|+.. +.||+++++.+|+++|++++++.. -+++-+-+..++|.+=|.+++.+ +.++.
T Consensus 124 ~~~~~~~~~g~~~---~~v~~~~~~~~~~~~l~~~~~~~~-----~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii 195 (371)
T PRK05166 124 LHEDYPTMMGARV---ERVTVTPDLGFDLDALCAAVARAP-----RMLMFSNPSNPVGSWLTADQLARVLDATPPETLIV 195 (371)
T ss_pred HHHHHHHHcCCeE---EEeecCCCCCCCHHHHHHhhhcCC-----CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEE
Confidence 4567788899877 999999889999999999987532 24545778899999887766443 56777
Q ss_pred eccccccc-cc----eee-eecC--CCc-cccccccccc-------c---CCc-------ccCCCCcccHHHHHHHHHHc
Q psy13453 96 VGGVLRRV-YS----SCL-VPRG--QKS-LRTTVLFHFL-------F---QHW-------QIPLGRRFRALKLWMTLRSY 149 (764)
Q Consensus 96 VDa~l~~~-y~----s~l-l~rd--~~~-l~~~~s~~~d-------~---~d~-------tle~SRr~~ALklWatL~~l 149 (764)
+|...... +. +.+ +... ... .-.+||-.+. | .+. .+...-....+...+++..+
T Consensus 196 ~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~~~~~~~~~q~~~~~~l 275 (371)
T PRK05166 196 VDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRTPFNVNGAAQAAALAAL 275 (371)
T ss_pred EECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhccCCCCCHHHHHHHHHHh
Confidence 78753100 10 100 0000 000 0011110000 0 000 00000012223333333333
Q ss_pred c-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCc
Q psy13453 150 G-LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKV 228 (764)
Q Consensus 150 G-~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~ 228 (764)
- .+-+++..+...+..+++.+.|++. ++.+ .++.-+-+-++.. .+ ..++.+.|.++|.
T Consensus 276 ~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~-~p~~g~fl~~~~~-----------------~~--~~~l~~~l~~~gi 334 (371)
T PRK05166 276 DDEEHLAKGVALALAERERLKKELAEM-GYRI-APSRANFLFFDAR-----------------RP--ASAVAEALLRQGV 334 (371)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHC-cCee-CCCcCCEEEEeCC-----------------CC--HHHHHHHHHHCCe
Confidence 2 2335555666667777888999987 6764 4454433222210 01 2468888888887
Q ss_pred EEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 229 IYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 229 ~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
.+.....-....++|++++. +++.+.+.+.++++
T Consensus 335 ~v~p~~~~~~~~~iRi~~~~----~~~~~~l~~~l~~i 368 (371)
T PRK05166 335 IVKPWKQPGFETFIRVSIGS----PEENDHFVAALDKV 368 (371)
T ss_pred EEecCCCCCCCCeEEEEcCC----HHHHHHHHHHHHHH
Confidence 55443322336789999884 55567777666654
No 445
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=96.94 E-value=0.053 Score=62.72 Aligned_cols=170 Identities=16% Similarity=0.051 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+....++.+.|++++..+- ....|+.+|||||-.|++.||.....+ +..+ ++-+|.....-
T Consensus 89 ~~~~~~lae~L~~~~p~~~---------~~v~f~~sGsEAve~AlKlAr~~~~~~-g~t~---------r~~ii~~~~~y 149 (466)
T PRK07030 89 HEPVIELSERLVKITPPGL---------SRCFYADNGSSAIEVALKMSFHYWRNR-GKPR---------KKRFVTLTNSY 149 (466)
T ss_pred CHHHHHHHHHHHHhCCCCc---------CEEEEeCCcHHHHHHHHHHHHHHHHHh-CCCC---------CcEEEEECCCc
Confidence 4556667778888763111 246899999999999999999864322 1000 12244455555
Q ss_pred chhHHHHHHhCCC------------ceEEEecCCCCc------------ccHHHHHHHHHHhhhcCCCceEEEEee-ccC
Q psy13453 641 NSSVEKSAIIGDV------------PVRQLRSDDNGV------------LRGDALLTAVKEDLAKGLIPCCLIATL-GTT 695 (764)
Q Consensus 641 H~Sv~kAa~~lGl------------~v~~Vp~d~~g~------------md~~~Le~~I~~~~~~G~~p~~Vvata-GTT 695 (764)
|=...-+..+.|. .+..+|.....+ -+++.|++.|.+ .+....+|++-- -..
T Consensus 150 HG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~---~~~~iAAvi~EP~iqg 226 (466)
T PRK07030 150 HGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAE---HHDEIAAVIVEPLIQG 226 (466)
T ss_pred CcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEeccccc
Confidence 6444334333221 234444322111 135667777753 233455555443 123
Q ss_pred Ccccc----ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCC
Q psy13453 696 GTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLL 755 (764)
Q Consensus 696 ~~Gai----Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~ 755 (764)
..|.+ +=+++|+++|++||+.|++|-.+.|+-....-+....-|+ ..|-+++ -|.++
T Consensus 227 ~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~ 287 (466)
T PRK07030 227 AGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGI-RPDFLCL--SKALT 287 (466)
T ss_pred CCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCC-CCCEEee--ehhcc
Confidence 33444 4588999999999999999999877533322222223356 4777777 56544
No 446
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=96.91 E-value=0.033 Score=63.69 Aligned_cols=168 Identities=12% Similarity=-0.023 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+.|++++.-+- ....|+.+|||||..|++.||.....+ + .+ . +-+|.....-|
T Consensus 86 ~~~~~la~~L~~~~p~~~---------~~v~f~~SGsEAve~AlklAr~~~~~~-g-~~--------r-~kii~~~~~yH 145 (428)
T PRK07986 86 PPAIELCRKLVAMTPQPL---------ECVFLADSGSVAVEVAMKMALQYWQAK-G-EP--------R-QRFLTLRHGYH 145 (428)
T ss_pred HHHHHHHHHHHhhCCCCc---------CEEEEeCCcHHHHHHHHHHHHHHHHhc-C-CC--------C-cEEEEECCCcC
Confidence 445566777777764211 246899999999999999999763221 0 00 1 12344444455
Q ss_pred hhHHHHHHhCC-----------C--ceEEEecCCC-----C-cccHHHHHHHHHHhhhcCCCceEEEEeec-cCCccc--
Q psy13453 642 SSVEKSAIIGD-----------V--PVRQLRSDDN-----G-VLRGDALLTAVKEDLAKGLIPCCLIATLG-TTGTCA-- 699 (764)
Q Consensus 642 ~Sv~kAa~~lG-----------l--~v~~Vp~d~~-----g-~md~~~Le~~I~~~~~~G~~p~~VvataG-TT~~Ga-- 699 (764)
=...-+..+.| . .+..+|.... . .=|.++|++.|++. +....+|+.--- ....|.
T Consensus 146 G~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~---~~~iaavi~Epi~~g~gg~~~ 222 (428)
T PRK07986 146 GDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAH---RHEIAAVILEPIVQGAGGMRI 222 (428)
T ss_pred CCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhC---CCcEEEEEEechhcCcCCccc
Confidence 33222222211 1 2334443211 1 12567788877532 223334443221 222233
Q ss_pred --cccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCC
Q psy13453 700 --FDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLL 755 (764)
Q Consensus 700 --iDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~ 755 (764)
-+.+++|+++|++||+.|++|-++.|+-....-+.....|+ ..|-++ +-|.++
T Consensus 223 ~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv-~PDi~t--~gK~l~ 277 (428)
T PRK07986 223 YHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGI-APDILC--LGKALT 277 (428)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCC-CCCEEE--echhhh
Confidence 24599999999999999999999866311111111112355 357665 467654
No 447
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=96.90 E-value=0.062 Score=62.03 Aligned_cols=170 Identities=14% Similarity=0.068 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+..+.++.+.|++++..+- ....|+.+|||||-.|++.||.....+ +..+ ++-+|.....-
T Consensus 98 ~~~~~~lae~L~~~~p~~~---------~~v~f~~SGseAve~AlklAr~~~~~~-g~tg---------r~~ii~~~~~Y 158 (460)
T PRK06916 98 NVPSILLAEKLIEVVPEGL---------KKVFYSDSGATAVEIAIKMAFQYWQNK-GKPK---------KQRFVTLKNAY 158 (460)
T ss_pred CHHHHHHHHHHHHhCCCCC---------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC---------CcEEEEECCcC
Confidence 4455667777888763211 246899999999999999999864321 1000 12245555556
Q ss_pred chhHHHHHHhCCC------------ceEEEecCCCC------------cccHHHHHHHHHHhhhcCCCceEEEEee-ccC
Q psy13453 641 NSSVEKSAIIGDV------------PVRQLRSDDNG------------VLRGDALLTAVKEDLAKGLIPCCLIATL-GTT 695 (764)
Q Consensus 641 H~Sv~kAa~~lGl------------~v~~Vp~d~~g------------~md~~~Le~~I~~~~~~G~~p~~Vvata-GTT 695 (764)
|=...-+..+.|- .+..+|..... .-+++.+++.|+. .+....+|++-- -..
T Consensus 159 HG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAvi~EP~iqg 235 (460)
T PRK06916 159 HGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKE---KHEEIAAIIVEPLVQG 235 (460)
T ss_pred CcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccC
Confidence 6544444443321 23445432100 1245667777753 223445555432 122
Q ss_pred Ccccc----ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCC
Q psy13453 696 GTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLL 755 (764)
Q Consensus 696 ~~Gai----Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~ 755 (764)
..|.+ +=++++.++|++||+.|++|-.+-|+-....-+....-|+ ..|-+++ -|.++
T Consensus 236 ~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv-~PDiv~~--gK~l~ 296 (460)
T PRK06916 236 AGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENV-TPDIMTA--GKGLT 296 (460)
T ss_pred CCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCC-CCCeeee--ehhhh
Confidence 23433 4588999999999999999999876423222222222355 4676665 56444
No 448
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=96.90 E-value=0.058 Score=60.06 Aligned_cols=219 Identities=6% Similarity=-0.020 Sum_probs=121.3
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
.|.+..+++.+.|... +.++ .+|++++++.|.+... .++-+++-..-.+++|.+.|++++++ ++|+
T Consensus 126 ~~~~~~~~~~~~g~~~---~~~~-----~~d~~~l~~~l~~~~~-~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~l 196 (385)
T TIGR01825 126 NHASIIDGLRLTKATK---KIYK-----HADMDDLDRVLRENPS-YGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVT 196 (385)
T ss_pred ccHHHHHHHHhcCCce---EEeC-----CCCHHHHHHHHHhhcc-CCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEE
Confidence 5777888888877655 4332 6899999999886432 12223333334577899999999876 8899
Q ss_pred eeccccccc-c---c--ee--e-eecCC----Ccccccccc--cc-----c-------cC-CcccCCCC-cccHHHHHHH
Q psy13453 95 KVGGVLRRV-Y---S--SC--L-VPRGQ----KSLRTTVLF--HF-----L-------FQ-HWQIPLGR-RFRALKLWMT 145 (764)
Q Consensus 95 HVDa~l~~~-y---~--s~--l-l~rd~----~~l~~~~s~--~~-----d-------~~-d~tle~SR-r~~ALklWat 145 (764)
.+|.+.... + + +. + +..+. .++...+.. .+ + .. .+...+.- ......+.++
T Consensus 197 i~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a 276 (385)
T TIGR01825 197 YVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVGGYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAA 276 (385)
T ss_pred EEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCCCEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHH
Confidence 999964211 1 0 00 0 00010 011111110 00 0 11 12211111 1111233334
Q ss_pred HHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHh
Q psy13453 146 LRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIA 225 (764)
Q Consensus 146 L~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~ 225 (764)
+..+-. ..+..++..+..+++.+.|++. ++++. .|+.+++.+...+ ......+.++|.+
T Consensus 277 l~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~-----------------~~~~~~~~~~L~~ 335 (385)
T TIGR01825 277 VDELQR--SPELMERLWDNTRFFKAGLGKL-GYDTG-GSETPITPVVIGD-----------------EKAAQEFSRRLFD 335 (385)
T ss_pred HHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEECC-----------------HHHHHHHHHHHHH
Confidence 433311 2356667778899999999875 77764 3555566654321 0112568888888
Q ss_pred cCcEEEEece---eCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 226 RKVIYIVKGS---FQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 226 ~G~~~vs~t~---l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
+|........ -.+...+|++ .+-.+++++++.+++.++++.++
T Consensus 336 ~gi~v~~~~~~~~~~~~~~iRi~-~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 336 EGIFAQSIVFPTVPRGTARIRNI-PTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred CCcEEcccCCCCCCCCCceEEEE-EcCCCCHHHHHHHHHHHHHHHHH
Confidence 8875422111 1234678884 34457899999999999887643
No 449
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=96.90 E-value=0.013 Score=65.79 Aligned_cols=220 Identities=10% Similarity=0.021 Sum_probs=121.5
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC-CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD-SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~-~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
.|.+...++..+|... +.|+++. ++.+|+++|+++|.+.+ -+++ ++-.+|..-|++++++ +++
T Consensus 82 ~~~~~~~~~~~~G~~~---v~vd~~~~~~~~d~~~l~~~i~~~t-----kav~---~~~~~G~~~d~~~i~~~a~~~gi~ 150 (379)
T PRK11658 82 TWVSTLNMIVLLGATP---VMVDVDRDTLMVTPEAIEAAITPRT-----KAII---PVHYAGAPADLDAIRAIGERYGIP 150 (379)
T ss_pred cHHHHHHHHHHcCCEE---EEEecCCCcCCcCHHHHHHhcccCC-----eEEE---EeCCCCCcCCHHHHHHHHHHcCCe
Confidence 3456667888889887 9999985 56799999999997532 1333 3334788888888765 889
Q ss_pred ceeccccc--ccc-------------------------ceeeeecCCCccccc--ccc---ccccCCc------------
Q psy13453 94 LKVGGVLR--RVY-------------------------SSCLVPRGQKSLRTT--VLF---HFLFQHW------------ 129 (764)
Q Consensus 94 lHVDa~l~--~~y-------------------------~s~ll~rd~~~l~~~--~s~---~~d~~d~------------ 129 (764)
+++|++.. ..| +++++..+++..... +.. ..+..+.
T Consensus 151 vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 230 (379)
T PRK11658 151 VIEDAAHAVGTYYKGRHIGARGTAIFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVL 230 (379)
T ss_pred EEEECCCccCCeECCeecCCCCCEEEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceee
Confidence 99999531 111 122332222211100 000 0000000
Q ss_pred ccCCCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC------ceeEEEEeeccccccccc
Q psy13453 130 QIPLGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS------MGLVCFRLKVRFWDKLDN 203 (764)
Q Consensus 130 tle~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~------l~iV~Fry~P~~~~~~~~ 203 (764)
.+...-+.. .+=+++-..-.+++.+..++..++++++.+.|++.+. +.+..|. ..+.+|+..+..
T Consensus 231 ~~G~n~~~~--~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------ 301 (379)
T PRK11658 231 TPGYKYNLA--DINAAIALVQLAKLEALNARRREIAARYLQALADLPF-QPLSLPAWPHQHAWHLFIIRVDEER------ 301 (379)
T ss_pred ccccccCcC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-ccCcCCCCCCceeEEEEEEEECCcc------
Confidence 000001122 2234444555688999999999999999999998864 3333222 134445542110
Q ss_pred cccCccCCccHHHHHHHHHHHhcCcEEE-EeceeC-------------C----eeEEEEec--cCCCCCHHHHHHHHHHH
Q psy13453 204 LFGTISFGDNDLNKAVYDRIIARKVIYI-VKGSFQ-------------D----RLFMRFAI--CSSQTEESDVQLGWNEI 263 (764)
Q Consensus 204 ~~~~~~~~~d~~n~~L~~~L~~~G~~~v-s~t~l~-------------g----~~~LRi~v--~np~Tt~e~i~~~l~~l 263 (764)
.+. -..++.++|.+.|...- ....++ . ..+-|... +++..++++++.+++.|
T Consensus 302 ------~~~--~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i 373 (379)
T PRK11658 302 ------CGI--SRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITAL 373 (379)
T ss_pred ------ccC--CHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHH
Confidence 001 12467778887774210 000110 0 11123211 47889999999999999
Q ss_pred HHHH
Q psy13453 264 RTAT 267 (764)
Q Consensus 264 ~~~~ 267 (764)
+++.
T Consensus 374 ~~~~ 377 (379)
T PRK11658 374 QQIA 377 (379)
T ss_pred HHHH
Confidence 8753
No 450
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=96.89 E-value=0.06 Score=61.91 Aligned_cols=174 Identities=13% Similarity=0.027 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+..+.++.+.|++++.-+.. ....|+.+|||||..|++.||... .+ +.+|.....-
T Consensus 96 ~~~~~~la~~L~~~~p~~~~--------~~v~f~~sGseA~e~AlklAr~~t-gr---------------~~ii~~~~~y 151 (451)
T PRK06918 96 YEPYIELAEKLAALAPGSFD--------KKVLFLNSGAEAVENAVKIARKYT-KR---------------QGIISFSRGF 151 (451)
T ss_pred cHHHHHHHHHHHHhCCCCCC--------CEEEEcCCcHHHHHHHHHHHHHHh-CC---------------CcEEEECCCc
Confidence 45566777788888742110 146899999999999999999752 11 1133334344
Q ss_pred chhHHHHHHhCC-------------CceEEEecCC-----CCccc--------HHHHHHHHHHhhhcCCCceEEEEeecc
Q psy13453 641 NSSVEKSAIIGD-------------VPVRQLRSDD-----NGVLR--------GDALLTAVKEDLAKGLIPCCLIATLGT 694 (764)
Q Consensus 641 H~Sv~kAa~~lG-------------l~v~~Vp~d~-----~g~md--------~~~Le~~I~~~~~~G~~p~~VvataGT 694 (764)
|=...-+..+.| -.+..+|... .+ +. .+.+++.+.... .+....+|++---.
T Consensus 152 HG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~EPi~ 229 (451)
T PRK06918 152 HGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEG-LTEEQYDDFMIEEFKNFFISEV-APETIAAVVMEPVQ 229 (451)
T ss_pred CccchhhhhhcCCCccccccCCCCCCCcEEcCCCcccccccc-CchHHHHHHHHHHHHHHHHhhc-CCCceEEEEECccc
Confidence 433222222211 1234444321 11 11 223444442211 22234455443333
Q ss_pred CCcccc----ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 695 TGTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 695 T~~Gai----Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
...|.+ +-+++|+++|++||+||+.|-.|.+.......+....-++ ..|-+ .+-|.++.-+.+|++
T Consensus 230 g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v-~pDi~--t~sK~l~~G~pig~v 299 (451)
T PRK06918 230 GEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDV-VPDLI--TVSKSLGAGVPISGV 299 (451)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCC-CCCEE--eeehhhcCCCccEEE
Confidence 333433 3489999999999999999999887533221111111133 35644 567877644445543
No 451
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=96.89 E-value=0.036 Score=64.80 Aligned_cols=224 Identities=9% Similarity=0.013 Sum_probs=128.8
Q ss_pred eeHHHHHhhcCCCCCCeEEecCCC--CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc-----C
Q psy13453 22 YESFKATHSLSGTPDQVRLSGLPD--SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS-----N 91 (764)
Q Consensus 22 YSv~KAa~~LGl~~~~v~~Vpvd~--~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~-----~ 91 (764)
.++..++.+.|... +.+|+++ ++.+|+++|++++... +-++|-+-|+-+||.+=+ +.++++ +
T Consensus 243 ~~y~~~~~~~g~~~---v~~~~~~~~~~~~d~~~l~~~~~~~-----~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~ 314 (517)
T PRK13355 243 PLWTACVNLAGGTA---VHYRCDEQSEWYPDIDDIRSKITSR-----TKAIVIINPNNPTGALYPREVLQQIVDIAREHQ 314 (517)
T ss_pred cCHHHHHHHCCCEE---EEeecCcccCCCCCHHHHHHhcCcC-----ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcC
Confidence 34566788899876 8889874 5789999999988653 224555568999999877 455543 7
Q ss_pred CCceecccccc------ccceee-eecCCCcc-ccccc---------ccccc--CCc----------c-cCCCC-cccHH
Q psy13453 92 GPLKVGGVLRR------VYSSCL-VPRGQKSL-RTTVL---------FHFLF--QHW----------Q-IPLGR-RFRAL 140 (764)
Q Consensus 92 ~wlHVDa~l~~------~y~s~l-l~rd~~~l-~~~~s---------~~~d~--~d~----------t-le~SR-r~~AL 140 (764)
+|+-+|.+... .+.++. +..+...+ -.+|| ..|-. ++. . +...+ ....+
T Consensus 315 ~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 394 (517)
T PRK13355 315 LIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNMLANMRLCSNVP 394 (517)
T ss_pred cEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHHHhcCcCCcChH
Confidence 88888875311 111100 00110000 00111 00100 100 0 01111 23445
Q ss_pred HHHHHHHHccH----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEE-EeeccccccccccccCccCCccHH
Q psy13453 141 KLWMTLRSYGL----KGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCF-RLKVRFWDKLDNLFGTISFGDNDL 215 (764)
Q Consensus 141 klWatL~~lG~----eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~F-ry~P~~~~~~~~~~~~~~~~~d~~ 215 (764)
..+++...++. +.|.+..++..+..+++.+.|+++|++++ .+|+-+..+| +..+.... ..+.
T Consensus 395 ~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~-~~p~g~fy~~~~l~~~~~~-----------~~~~- 461 (517)
T PRK13355 395 AQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIPGISA-VKPKAAFYIFPKIDVKKFN-----------IHDD- 461 (517)
T ss_pred HHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCccc-CCCCeeeEEEeecCcccCC-----------CCCH-
Confidence 55666666632 22333334566777889999999888874 6788877777 33210000 0011
Q ss_pred HHHHHHHHHhcCcEEEEecee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 216 NKAVYDRIIARKVIYIVKGSF--QDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 216 n~~L~~~L~~~G~~~vs~t~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
...+.+.|.+.|.+++-.+.+ .+..++|++++ +..+.+++.++.|.+..+.
T Consensus 462 ~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~---~~~~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 462 EQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL---PRLEDLEDAMDRLADFFSY 514 (517)
T ss_pred HHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC---CCHHHHHHHHHHHHHHHHH
Confidence 134456677788876655544 35679999885 5678899988888887654
No 452
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=96.88 E-value=0.0097 Score=65.69 Aligned_cols=145 Identities=14% Similarity=-0.002 Sum_probs=90.8
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
..+.+++++.+|.++. ...++|+|+++++.. +.. .... .+ +++.+-+....
T Consensus 56 ~~L~~~ia~~~~~~~~--------~~I~i~~Gs~e~i~~-l~~----~~~~--------------g~--v~v~~P~y~~y 106 (339)
T PRK06959 56 DGLAACAARYYGAPDA--------AHVLPVAGSQAAIRA-LPA----LLPR--------------GR--VGIAPLAYSEY 106 (339)
T ss_pred HHHHHHHHHHhCCCCc--------ccEEECcCHHHHHHH-HHH----hcCC--------------Ce--EEEcCCCcHHH
Confidence 5677899999999641 257888998887542 221 1110 12 34455566667
Q ss_pred HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHH---HHHhcCCEEEEec
Q psy13453 645 EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGP---ICQEYNIWLHVDA 721 (764)
Q Consensus 645 ~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~---i~~~~glwLHVDa 721 (764)
..+++..|.+++.||.+. +.+. +.. -+|+.+..++.||.+=+.+++.+ .|++++.|+.+|-
T Consensus 107 ~~~~~~~g~~~~~v~~~~------~~~~----~~~------~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DE 170 (339)
T PRK06959 107 APAFARHGHRVVPLDEAA------DTLP----AAL------THLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDE 170 (339)
T ss_pred HHHHHHCCCEEEeecccc------hhcc----ccC------CEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEC
Confidence 778899999998888764 2221 111 15677778999999966555554 4668899999999
Q ss_pred cccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 722 AYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 722 A~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+|.-+.. .+......+ -++ =-+.-++.|.++.|
T Consensus 171 ay~~~~~-~~s~~~~~~-~~~-vi~l~SfSK~~gl~ 203 (339)
T PRK06959 171 AFADTLP-AASLAAHTD-RPG-LVVLRSVGKFFGLA 203 (339)
T ss_pred CCccCCC-cccchhccC-CCC-EEEEecChhhcCCc
Confidence 9987431 121111111 111 13566899988755
No 453
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=96.87 E-value=0.01 Score=66.16 Aligned_cols=128 Identities=15% Similarity=0.081 Sum_probs=81.5
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
.++.++|+++.+ .. .-.+|+.+|||||=.|++.||.+..+..+ .-+|.+...-|=--
T Consensus 87 ~~la~~L~~~s~-~~---------d~vff~NSGaEA~EaAiKlARk~~~~~~k-------------~~Iia~~nsFHGRT 143 (404)
T COG4992 87 AELAEKLVELSP-FA---------DRVFFCNSGAEANEAALKLARKYTGDPEK-------------SKIIAFENSFHGRT 143 (404)
T ss_pred HHHHHHHHhhCc-cc---------cEEEEcCCcHHHHHHHHHHHHHHcCCCCC-------------cEEEEEcCCcCCcc
Confidence 345567777775 12 23679999999999999999988651100 11233333333111
Q ss_pred HHHH---------HhCC-C--ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc----ccHHHHHH
Q psy13453 645 EKSA---------IIGD-V--PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF----DNLEELGP 708 (764)
Q Consensus 645 ~kAa---------~~lG-l--~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai----Dpl~eIa~ 708 (764)
.-+. .-++ + .++.||-+ |+++|+++|.+++. .|+.=--.-+.|.+ +=+.++++
T Consensus 144 ~galS~t~~~ky~~~F~Pl~~g~~~vpfn-----Di~al~~ai~~~ta------AvivEPIQGEgGV~~~~~~fl~~lr~ 212 (404)
T COG4992 144 LGALSATGQPKYRKGFGPLLPGFRHVPFN-----DIEALEAAIDEDTA------AVIVEPIQGEGGVIPAPPEFLKALRE 212 (404)
T ss_pred ceeeeccCChhhccCCCCCCCCceecCCC-----CHHHHHHHhccCeE------EEEEecccCCCCCCCCCHHHHHHHHH
Confidence 1111 1111 1 46677765 58999999988643 55443333344555 45888999
Q ss_pred HHHhcCCEEEEecccccc
Q psy13453 709 ICQEYNIWLHVDAAYAGS 726 (764)
Q Consensus 709 i~~~~glwLHVDaA~Gg~ 726 (764)
+|++||+.|+.|-.|.|.
T Consensus 213 lCd~~g~LLI~DEVQtG~ 230 (404)
T COG4992 213 LCDEHGALLILDEVQTGL 230 (404)
T ss_pred HHHHhCeEEEEeccccCC
Confidence 999999999999999885
No 454
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=96.87 E-value=0.09 Score=59.36 Aligned_cols=233 Identities=10% Similarity=0.016 Sum_probs=125.3
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhh---------CCCCcEEEEeeCCcccccccCchhhhc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRK---------SFLCPMCSGYCGRTLHQDIQSLNAPVS 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~---------~G~~p~~VatAGTT~~G~iDpi~~ia~ 90 (764)
.|.|+..++.+.+... +.++.. |++.+++.++.... ..++.+++.-...-+.|.+-|++++.+
T Consensus 91 ~h~s~~~~~~l~~~~~---~~~~~~-----d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~ 162 (392)
T PLN03227 91 VNEALLVGVSLSRANV---RWFRHN-----DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVA 162 (392)
T ss_pred ccHHHHHHHHHcCCeE---EEeCCC-----CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHH
Confidence 6888888887777543 555543 34455554443221 113344544444557899999998776
Q ss_pred -----CCCceecccccccc-c----e---ee-e-ecCC-Cccccccc-----------cccc---cC-----CcccCCCC
Q psy13453 91 -----NGPLKVGGVLRRVY-S----S---CL-V-PRGQ-KSLRTTVL-----------FHFL---FQ-----HWQIPLGR 135 (764)
Q Consensus 91 -----~~wlHVDa~l~~~y-~----s---~l-l-~rd~-~~l~~~~s-----------~~~d---~~-----d~tle~SR 135 (764)
++++++|..+...+ + + +. + .... +....+++ ..-+ .. .++..+
T Consensus 163 l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~gg~v~~~~~~~~~~~~~~~~~~~~~-- 240 (392)
T PLN03227 163 LKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVGGMTVGSEEVVDHQRLSGSGYCFSA-- 240 (392)
T ss_pred HHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccCcEEecCHHHHHHHHHhCcCccccC--
Confidence 88899998653111 0 0 00 0 0000 11111111 0001 00 011111
Q ss_pred cccHHHHHHHHHHc-cHHHHHHHHHHHHHHHHHHHHHHhcC--C-------CeEEeCCCCceeEEEEeeccccccccccc
Q psy13453 136 RFRALKLWMTLRSY-GLKGLQAYLRKHISLAKKFADLVEQD--D-------RFELVCPPSMGLVCFRLKVRFWDKLDNLF 205 (764)
Q Consensus 136 r~~ALklWatL~~l-G~eGy~~~i~~~i~lA~~l~~~I~~~--p-------~~ell~~P~l~iV~Fry~P~~~~~~~~~~ 205 (764)
....+-+|+++..+ ...-..+++++.-+++++|.+.|++. | ++.+...+..+++.+...+.....
T Consensus 241 ~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~----- 315 (392)
T PLN03227 241 SAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISPIIYLRLSDQEATR----- 315 (392)
T ss_pred CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCCEEEEEeCCHHHhh-----
Confidence 11134456665443 32224567888889999999999852 2 222233456677888663210000
Q ss_pred cCccCCccHHHHHHHHHHHhcCcEEEEec-------eeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 206 GTISFGDNDLNKAVYDRIIARKVIYIVKG-------SFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 206 ~~~~~~~d~~n~~L~~~L~~~G~~~vs~t-------~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
..+.+..-.++.+++.++|.+..... .+-.+..+|+++. ...|+++++++++.++++.+++.
T Consensus 316 ---~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~-~~~t~eei~~~~~~l~~~~~~~~ 384 (392)
T PLN03227 316 ---RTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVAN-ASHTREDIDKLLTVLGEAVEAIL 384 (392)
T ss_pred ---hhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEec-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 00111233588899999998653211 1122467899655 44568899999999999987764
No 455
>PLN02724 Molybdenum cofactor sulfurase
Probab=96.83 E-value=0.028 Score=69.33 Aligned_cols=171 Identities=10% Similarity=-0.049 Sum_probs=102.8
Q ss_pred eeHHHHHhhcCCCCCCeEEecCC--------CCCcccH--HHHHHHHHH----HhhCCCCc-EEEEeeCCcccccccCch
Q psy13453 22 YESFKATHSLSGTPDQVRLSGLP--------DSEWLAY--LTLRTIYES----FRKSFLCP-MCSGYCGRTLHQDIQSLN 86 (764)
Q Consensus 22 YSv~KAa~~LGl~~~~v~~Vpvd--------~~~rmD~--~aLe~~I~~----~~~~G~~p-~~VatAGTT~~G~iDpi~ 86 (764)
+.+.+.|.-.|+.. +.||++ +++.+|+ ++|++.+.+ ....+.++ +++-++-+..+|.+=||+
T Consensus 136 l~~~~~a~~~G~~v---~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~ 212 (805)
T PLN02724 136 LGIREYALEKGAAA---IAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLD 212 (805)
T ss_pred HHHHHHHHHcCCeE---EeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHH
Confidence 34455555557665 888887 4555655 667776531 11112223 556888889999999998
Q ss_pred hh---hcC---------C-Cceecccc--------------------cc-----ccc-eeeeecCCC--ccccccc----
Q psy13453 87 AP---VSN---------G-PLKVGGVL--------------------RR-----VYS-SCLVPRGQK--SLRTTVL---- 121 (764)
Q Consensus 87 ~i---a~~---------~-wlHVDa~l--------------------~~-----~y~-s~ll~rd~~--~l~~~~s---- 121 (764)
.+ .+. . +++|||+. .| +.+ ++|++|.+. .+...+.
T Consensus 213 ~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~ 292 (805)
T PLN02724 213 LVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPTGLGALLVRRDAAKLLKKKYFGGGT 292 (805)
T ss_pred HHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhcCCCEEEEecceeccCCCCceEEEEehhhhhhhcCCccCCCc
Confidence 76 221 2 47999931 12 222 456666421 1111110
Q ss_pred ccc-----ccC------CcccC-CCCc-ccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCC------CeEEeC
Q psy13453 122 FHF-----LFQ------HWQIP-LGRR-FRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDD------RFELVC 182 (764)
Q Consensus 122 ~~~-----d~~------d~tle-~SRr-~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p------~~ell~ 182 (764)
..+ ++. ...+| |+.. ...+.+-+++.++=.-|+.++-++..++++++.+.|++++ ++++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg 372 (805)
T PLN02724 293 VAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYG 372 (805)
T ss_pred eEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcC
Confidence 000 010 01122 2332 2335677788887666888888999999999999999986 588887
Q ss_pred CC--------CceeEEEEeec
Q psy13453 183 PP--------SMGLVCFRLKV 195 (764)
Q Consensus 183 ~P--------~l~iV~Fry~P 195 (764)
+. ...+|+|.+..
T Consensus 373 ~~~~~~~~~~r~~ivsFnv~~ 393 (805)
T PLN02724 373 NHTFKLEFHIQGPIVTFNLKR 393 (805)
T ss_pred CCCCCCCcccccCEEEEEEEc
Confidence 53 46799998763
No 456
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=96.81 E-value=0.048 Score=62.91 Aligned_cols=165 Identities=16% Similarity=0.101 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+..+.++.+.|+++++.+. ....|+++|||||-.|++.||... .+ ++ +|.....-
T Consensus 112 ~~~~~~lae~L~~~~p~~~---------~~v~f~~sGseAve~AlklAr~~t-gr--------------~~-ii~~~~~y 166 (459)
T PRK06082 112 NETAIECAEKLTEIAGGEL---------NRVLFAPGGTSAIGMALKLARHIT-GN--------------FK-VVSLWDSF 166 (459)
T ss_pred CHHHHHHHHHHHHhCCCCC---------CEEEECCCcHHHHHHHHHHHHHhc-CC--------------CE-EEEEeCCC
Confidence 4556667777888875321 246899999999999999999651 11 12 34445555
Q ss_pred chhHHHHHHhCCC------------ceEEEecCCCCc-----c------cHHHHHHHHHHhhhcCCCceEEEEeeccCCc
Q psy13453 641 NSSVEKSAIIGDV------------PVRQLRSDDNGV-----L------RGDALLTAVKEDLAKGLIPCCLIATLGTTGT 697 (764)
Q Consensus 641 H~Sv~kAa~~lGl------------~v~~Vp~d~~g~-----m------d~~~Le~~I~~~~~~G~~p~~VvataGTT~~ 697 (764)
|-...-+..+.|- .+..+|.....+ . +++.|++.|++ .+ ...+|+.---...-
T Consensus 167 HG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~---~~-~vAavIvEPv~g~g 242 (459)
T PRK06082 167 HGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK---EG-GIGAFIAEAVRNTD 242 (459)
T ss_pred cCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhc---CC-CEEEEEECCccCCC
Confidence 6444444443321 234454321111 1 13557777753 12 23344432211111
Q ss_pred ccccc---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 698 CAFDN---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 698 GaiDp---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+.+-| +++|+++|++||+.|++|-.+.|+-....-+....-|+ ..|-++ +-|.++.-
T Consensus 243 ~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv-~PDiv~--~gKgl~gG 302 (459)
T PRK06082 243 VQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGI-EPDILC--IGKGLGGG 302 (459)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCC-CCCEEE--ecccccCC
Confidence 22334 99999999999999999999887433221112222366 578776 57877643
No 457
>PRK06207 aspartate aminotransferase; Provisional
Probab=96.80 E-value=0.069 Score=60.39 Aligned_cols=221 Identities=10% Similarity=0.023 Sum_probs=122.6
Q ss_pred eeHHHHHhhcCCCCCCeEEecCC-----CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchh---hhc---
Q psy13453 22 YESFKATHSLSGTPDQVRLSGLP-----DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNA---PVS--- 90 (764)
Q Consensus 22 YSv~KAa~~LGl~~~~v~~Vpvd-----~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~---ia~--- 90 (764)
....+.++.+|... +.||++ +++.+|+++|++++++. +.+++-+-++.++|.+=+.++ +++
T Consensus 137 ~~~~~~~~~~g~~v---~~v~~~~~~~~~~~~~d~~~l~~~~~~~-----~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~ 208 (405)
T PRK06207 137 FANRKLVEFFEGEM---VPVQLDYLSADKRAGLDLDQLEEAFKAG-----VRVFLFSNPNNPAGVVYSAEEIAQIAALAR 208 (405)
T ss_pred hhHHHHHHHcCCEE---EEEeccccCcccCCCcCHHHHHHhhhhc-----CeEEEECCCCCCCCcCCCHHHHHHHHHHHH
Confidence 45667888899877 888886 36799999999998753 235566778999999977444 443
Q ss_pred --CCCceeccccccc-c-----ceeeee-cCCCc--cccccccccccCCc----cc--------------CCCCcccHHH
Q psy13453 91 --NGPLKVGGVLRRV-Y-----SSCLVP-RGQKS--LRTTVLFHFLFQHW----QI--------------PLGRRFRALK 141 (764)
Q Consensus 91 --~~wlHVDa~l~~~-y-----~s~ll~-rd~~~--l~~~~s~~~d~~d~----tl--------------e~SRr~~ALk 141 (764)
++|+-+|...... | .+..-. .+.+. .-.+||=.+....+ .+ ..+-....+.
T Consensus 209 ~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l~~~~~~~~~~~~~~~~~~~ 288 (405)
T PRK06207 209 RYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAIIDRMEKLQAIVSLRAAGYS 288 (405)
T ss_pred HcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHHHHHHHHHHhHhccCCCHHH
Confidence 6777777643211 1 111000 00000 00011100000000 00 0000111122
Q ss_pred HHHHHHHc--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHH
Q psy13453 142 LWMTLRSY--GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAV 219 (764)
Q Consensus 142 lWatL~~l--G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L 219 (764)
..+....+ |..-+.+.+++..+..+++.+.+++.+++++ .+|+-+..+|--.|+. ..+ ...+
T Consensus 289 q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~~p~gg~fl~~~l~~~-------------~~~--~~~~ 352 (405)
T PRK06207 289 QAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFV-RAPQAGSYLFPRLPRL-------------AVS--LHDF 352 (405)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCcee-cCCCeeEEEEEeCccc-------------CCC--HHHH
Confidence 22222222 3333577777777788889999988878774 4565444444222210 011 1357
Q ss_pred HHHHH-hcCcEEEEecee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 220 YDRII-ARKVIYIVKGSF--QDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 220 ~~~L~-~~G~~~vs~t~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
.++|. +.|..+.-...+ .+..++|+++.. ..+++++.++.|.++.++
T Consensus 353 ~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~---~~~~l~~al~rl~~~l~~ 402 (405)
T PRK06207 353 VKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ---DHAAAVAAAERIAQLIER 402 (405)
T ss_pred HHHHHHhcCEEEeCchHhCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHHH
Confidence 77776 568766544433 235689999985 468888888888776644
No 458
>PRK05965 hypothetical protein; Provisional
Probab=96.75 E-value=0.092 Score=60.60 Aligned_cols=166 Identities=13% Similarity=0.001 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+....++.+.|++++.-+- ....|+.+|||||-.|++.||...... +.. .++-+|..+..-
T Consensus 89 ~~~~~~lae~L~~~~p~~~---------~~v~f~~sGSEAve~AlKlAr~~~~~~-g~~---------~r~kii~~~~~Y 149 (459)
T PRK05965 89 SEPAIRLAAKLAERAPGSL---------NHVYFTLGGSDAVDSAVRFIRHYWNAT-GRP---------SKKQFISLERGY 149 (459)
T ss_pred CHHHHHHHHHHHhhCCCCc---------CEEEEeCChhHHHHHHHHHHHHHHHhc-CCC---------CccEEEEecCCc
Confidence 3444566777777753111 246899999999999999999864321 100 012244455555
Q ss_pred chhHHHHHHhCCC------------ceEEEecCCCCc----cc--------HHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 641 NSSVEKSAIIGDV------------PVRQLRSDDNGV----LR--------GDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 641 H~Sv~kAa~~lGl------------~v~~Vp~d~~g~----md--------~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
|=...-+..+.|. .+..+|.....+ -| .++|++.|++.. .....+|++---...
T Consensus 150 HG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~iAAvIvEPiqg~ 227 (459)
T PRK05965 150 HGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELG--ADNVAAFFCEPIQGS 227 (459)
T ss_pred CcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcC--CCceEEEEEeccccC
Confidence 6443333333221 234444321111 12 356777775421 123445554432222
Q ss_pred cccc----ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEE
Q psy13453 697 TCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDF 748 (764)
Q Consensus 697 ~Gai----Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~ 748 (764)
.|.+ +=+++++++|++||+.|++|-.+.|+-....-+....-|+ ..|-+++
T Consensus 228 gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~ 282 (459)
T PRK05965 228 GGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGV-VPDLMTV 282 (459)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCC-CCCeEEe
Confidence 3433 5688999999999999999999887633222222222345 3666665
No 459
>PLN02452 phosphoserine transaminase
Probab=96.75 E-value=0.041 Score=61.59 Aligned_cols=226 Identities=12% Similarity=0.059 Sum_probs=133.2
Q ss_pred ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCC--CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCccccc-ccCchh
Q psy13453 11 AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPD--SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQD-IQSLNA 87 (764)
Q Consensus 11 ~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~--~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~-iDpi~~ 87 (764)
+|.+.+. +---+.|-|..+|. ..++...-+. ..-.|++++ +.+. ....+--+--.|.+|+ +.|+++
T Consensus 99 l~~~~G~--fg~r~~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~v~~~hnETstGv~~~~~~~ 167 (365)
T PLN02452 99 DFVVTGS--WSKKAAKEAKKYCK--TNVIASGKDEKYTKIPSVSEW----ELTP---DAKFVHICANETIHGVEFKDYPD 167 (365)
T ss_pred EEEECCH--HHHHHHHHHHHhCC--CcEEEecCCCCCCCCCChHHc----CCCC---CCcEEEECCCCCCCcEecCcccc
Confidence 6666552 22335566777775 2233221121 114566664 2111 1123337889999999 699999
Q ss_pred hhcCCCceecccc------------------ccc----cc-eeeeecCCCccccccccccccCCcccC-------CCCcc
Q psy13453 88 PVSNGPLKVGGVL------------------RRV----YS-SCLVPRGQKSLRTTVLFHFLFQHWQIP-------LGRRF 137 (764)
Q Consensus 88 ia~~~wlHVDa~l------------------~~~----y~-s~ll~rd~~~l~~~~s~~~d~~d~tle-------~SRr~ 137 (764)
+.+ ..+=||+.- .|+ -+ +++..|++- +...-...+.+.+|..+ .+=..
T Consensus 168 i~~-~~lvVDa~Ss~g~~pidv~~~~v~~~saqK~lGP~Gl~~v~vr~~~-l~~~~~~~~~~~~~~~~~~~~s~~~TP~v 245 (365)
T PLN02452 168 VGN-VPLVADMSSNFLSKPVDVSKYGVIYAGAQKNVGPSGVTIVIIRKDL-IGNARPITPGMLDYKIHAENDSLYNTPPC 245 (365)
T ss_pred cCC-CeEEEECCccccCcccCHHHcCEEEEecccccCCCCeEEEEEcHHH-HhhcccCCCchhhHHHHHhcCCccCChhH
Confidence 864 455677721 111 11 345554322 11110111223333221 12222
Q ss_pred c-HHHHHHHHHHccHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEe-CCC---CceeEEEEeeccccccccccccCccCC
Q psy13453 138 R-ALKLWMTLRSYGLK-GLQAYLRKHISLAKKFADLVEQDDRFELV-CPP---SMGLVCFRLKVRFWDKLDNLFGTISFG 211 (764)
Q Consensus 138 ~-ALklWatL~~lG~e-Gy~~~i~~~i~lA~~l~~~I~~~p~~ell-~~P---~l~iV~Fry~P~~~~~~~~~~~~~~~~ 211 (764)
- ...+-.+++.+=.+ |+..+.++..++++++.+.|++.++|... .++ ...+|+|++. +
T Consensus 246 ~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~----------------~ 309 (365)
T PLN02452 246 FGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLG----------------G 309 (365)
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcC----------------C
Confidence 2 23556677777665 89999999999999999999998888222 222 2358899763 2
Q ss_pred ccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 212 DNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 212 ~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
. +.+.++.+.+.++|...+.....-|. +|++ +.+.++.++++.+++.+++..++
T Consensus 310 ~-~~~~~f~~~~~~~g~~~~~G~r~~gg--~R~s-~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 310 S-ELEAEFVKEAAKAGMVQLKGHRSVGG--MRAS-IYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred c-hhHHHHHHHHHHCCCcccCCccccCc--eEEE-CcCCCCHHHHHHHHHHHHHHHHh
Confidence 2 26678999999999855444333333 9996 55566799999999999988653
No 460
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=96.75 E-value=0.11 Score=59.31 Aligned_cols=167 Identities=14% Similarity=-0.044 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
.-.+..+.|.+++--+. ..--+|+.+||+||=.|++.||....+ .-+|-....-|=
T Consensus 100 ~~v~~ae~L~~~~p~~~--------~~~~~f~~sGaeA~E~AiKiAr~~Tgr----------------~~viaf~~afHG 155 (447)
T COG0160 100 PYVELAEKLTALAPGSG--------LKKVFFGNSGAEAVEAAIKIARAYTGR----------------PGVIAFDGAFHG 155 (447)
T ss_pred hHHHHHHHHHHhCCccc--------CCeEEecCCcHHHHHHHHHHHHHHhCC----------------CcEEEECCcccc
Confidence 33445556666653321 123579999999999999999987432 124555666665
Q ss_pred hHHHHHHhCC--------C-----ceEEEecCCCC------------cccHHHHHHHHHHhhhcCCCceEEEEeeccCCc
Q psy13453 643 SVEKSAIIGD--------V-----PVRQLRSDDNG------------VLRGDALLTAVKEDLAKGLIPCCLIATLGTTGT 697 (764)
Q Consensus 643 Sv~kAa~~lG--------l-----~v~~Vp~d~~g------------~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~ 697 (764)
...-++.+.| . .+..+|-.... .-..+.++..|......+..|.++++=--..+-
T Consensus 156 ~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgeg 235 (447)
T COG0160 156 RTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEG 235 (447)
T ss_pred cchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCC
Confidence 5555554422 1 37777764222 334566777777776667778888776666666
Q ss_pred cccc----cHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC
Q psy13453 698 CAFD----NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 698 GaiD----pl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~ 756 (764)
|.+. =+.++.++|++||+.|++|-.|.|+-.--.-+.+.-.|+ ..|-||+. |-++.
T Consensus 236 G~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv-~PDivt~a--K~ig~ 295 (447)
T COG0160 236 GIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTLA--KSLGG 295 (447)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCC-CCCEEEec--ccccC
Confidence 7664 488899999999999999999999754443334444566 56777765 54444
No 461
>PRK09105 putative aminotransferase; Provisional
Probab=96.74 E-value=0.032 Score=62.41 Aligned_cols=207 Identities=9% Similarity=0.006 Sum_probs=120.5
Q ss_pred eeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-------CCCc
Q psy13453 22 YESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-------NGPL 94 (764)
Q Consensus 22 YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-------~~wl 94 (764)
++...+++.+|.+. +.||+++++.+|+++|++... ++-+++-+-++.++|.+=+.+++.+ +.|+
T Consensus 130 ~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~~~------~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~l 200 (370)
T PRK09105 130 EAGWRAADAQGAPV---AKVPLRADGAHDVKAMLAADP------NAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVL 200 (370)
T ss_pred HHHHHHHHHcCCeE---EEecCCCCCCCCHHHHHhcCC------CCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEE
Confidence 44677899999988 999999889999999987621 2335555668999999987777543 5677
Q ss_pred eeccccccc--cceee-ee-cCCCcc-cccccc---------ccc---------cCCcccCCCCcccHHHHHHHHHHccH
Q psy13453 95 KVGGVLRRV--YSSCL-VP-RGQKSL-RTTVLF---------HFL---------FQHWQIPLGRRFRALKLWMTLRSYGL 151 (764)
Q Consensus 95 HVDa~l~~~--y~s~l-l~-rd~~~l-~~~~s~---------~~d---------~~d~tle~SRr~~ALklWatL~~lG~ 151 (764)
-+|.+.... ..+.. +. .....+ -.+|+= .+- +... ..+ ....+..+++...+..
T Consensus 201 IvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~--~~~-~~~~~~~~aa~~~L~~ 277 (370)
T PRK09105 201 LVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF--GHN-PLPVPAAAAGLASLRD 277 (370)
T ss_pred EEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc--CCC-CcCHHHHHHHHHHHhC
Confidence 777753110 00100 00 000000 001110 000 0000 111 1333344556655554
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEE
Q psy13453 152 KGLQA-YLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIY 230 (764)
Q Consensus 152 eGy~~-~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~ 230 (764)
+.|.+ ..++.-+..+++.+.|++. ++++ .+|+.+.+.++.. .+ ..++.++|.++|...
T Consensus 278 ~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~-~~~~~~f~~~~~~-----------------~~--~~~l~~~L~~~gI~v 336 (370)
T PRK09105 278 PKLVPQRRAENAAVREDTIAWLKKK-GYKC-TPSQANCFMVDVK-----------------RP--AKAVADAMAKQGVFI 336 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC-CCCc-CCCCCcEEEEeCC-----------------CC--HHHHHHHHHHCCcEE
Confidence 55544 4455556777888889885 7765 4566665544321 01 146888888888764
Q ss_pred EEeceeC-CeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 231 IVKGSFQ-DRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 231 vs~t~l~-g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
. .... ...++|+++. ++++++.+++.++++.
T Consensus 337 -~-~~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 337 -G-RSWPIWPNWVRVTVG----SEEEMAAFRSAFAKVM 368 (370)
T ss_pred -e-cCCCCCCCeEEEEcC----CHHHHHHHHHHHHHHh
Confidence 2 2222 3578999877 3678888888887653
No 462
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=96.74 E-value=0.026 Score=62.42 Aligned_cols=206 Identities=9% Similarity=0.013 Sum_probs=117.5
Q ss_pred ee-HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc------CCCc
Q psy13453 22 YE-SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS------NGPL 94 (764)
Q Consensus 22 YS-v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~------~~wl 94 (764)
|+ +...++.+|+.. +.||+++++.+|++.+++ +. ++-+++-+-++-++|.+=|.+++.+ ++++
T Consensus 112 y~~y~~~~~~~g~~v---~~v~~~~~~~~~~~~l~~-~~------~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~v 181 (354)
T PRK04635 112 YGMYAISAETFNVGV---KALPLTADYQLPLDYIEQ-LD------GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIV 181 (354)
T ss_pred hHHHHHHHHHcCCEE---EEEecCCCCCCCHHHHHh-cc------CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEE
Confidence 55 456688999887 999999889999999973 32 2225555689999999988777554 4677
Q ss_pred eeccccccc--cce----------eeeecCCCccccccc-----cccccCCc-------ccCCCCcccHHHHHHHHHHc-
Q psy13453 95 KVGGVLRRV--YSS----------CLVPRGQKSLRTTVL-----FHFLFQHW-------QIPLGRRFRALKLWMTLRSY- 149 (764)
Q Consensus 95 HVDa~l~~~--y~s----------~ll~rd~~~l~~~~s-----~~~d~~d~-------tle~SRr~~ALklWatL~~l- 149 (764)
-+|.+.... ..+ .+..+ ++...|. ..+-+... .+...-...++...+++..+
T Consensus 182 ivDeay~~~~~~~s~~~~~~~~~~~iv~~---S~SK~~~l~GlRlG~~i~~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~ 258 (354)
T PRK04635 182 VVDEAYIEFCPEYSVADLLASYPNLVVLR---TLSKAFALAGARCGFTLANEELIEILMRVIAPYPVPLPVSEIATQALS 258 (354)
T ss_pred EEeCchHhhccCcchHHHHhhCCCEEEEe---chHHHhhhhHHHHhhhhCCHHHHHHHHhhcCCCCCCHHHHHHHHHHHh
Confidence 778753110 001 11111 0111110 00000000 00000111222223333333
Q ss_pred --cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcC
Q psy13453 150 --GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARK 227 (764)
Q Consensus 150 --G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G 227 (764)
|.+-+.+.+++..+..+++.+.|++.+++++. +|.-+-+.+++. + ..++.+.|.+.|
T Consensus 259 ~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~g~f~~~~~~----------------~----~~~~~~~l~~~g 317 (354)
T PRK04635 259 EAGLARMKFQVLDLNAQGARLQAALSMYGGAKVL-EGNGNYVLAKFD----------------D----VDAVFKALWDAG 317 (354)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCcEEEEECC----------------C----HHHHHHHHHHCC
Confidence 34445666677777778899999988777754 555443333321 1 135677788888
Q ss_pred cEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHH
Q psy13453 228 VIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRT 265 (764)
Q Consensus 228 ~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~ 265 (764)
..+..........++|+++. ++++++.+++.+++
T Consensus 318 v~v~~~~~~~~~~~lRis~~----~~e~~~~l~~al~~ 351 (354)
T PRK04635 318 IVARAYKDPRLANCIRFSFS----NRAETDKLIGLIRN 351 (354)
T ss_pred EEEEECCCCCCCCeEEEEeC----CHHHHHHHHHHHHH
Confidence 75543322223468999864 57899999988865
No 463
>PRK07324 transaminase; Validated
Probab=96.74 E-value=0.077 Score=59.29 Aligned_cols=216 Identities=10% Similarity=0.067 Sum_probs=117.5
Q ss_pred eeHHHHHhhcCCCCCCeEEecCCC--CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc-----C
Q psy13453 22 YESFKATHSLSGTPDQVRLSGLPD--SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS-----N 91 (764)
Q Consensus 22 YSv~KAa~~LGl~~~~v~~Vpvd~--~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~-----~ 91 (764)
.+....++.+|... +.+|+++ .+.+|+++|++++..+ +-+++-+.++.++|.+=+ ++++++ +
T Consensus 115 ~~~~~~~~~~g~~v---~~v~~~~~~~~~~d~~~l~~~~~~~-----~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~ 186 (373)
T PRK07324 115 QQLYDIPESLGAEV---DYWQLKEENGWLPDLDELRRLVRPN-----TKLICINNANNPTGALMDRAYLEEIVEIARSVD 186 (373)
T ss_pred hhHHHHHHHcCCEE---EEEecccccCCCCCHHHHHHhCCCC-----CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCC
Confidence 35667788899876 9999974 3578999999888642 225556688889998866 666654 8
Q ss_pred CCceeccccccc-cc----eeeeecCCCccccccccccc---------------------cCCcccCCCCcccHHHHHHH
Q psy13453 92 GPLKVGGVLRRV-YS----SCLVPRGQKSLRTTVLFHFL---------------------FQHWQIPLGRRFRALKLWMT 145 (764)
Q Consensus 92 ~wlHVDa~l~~~-y~----s~ll~rd~~~l~~~~s~~~d---------------------~~d~tle~SRr~~ALklWat 145 (764)
+++.+|.+.... |. +..-..+......+|+=.+. +..++ +-....+.-+++
T Consensus 187 ~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~~~~~~---~~~~~~~~q~~a 263 (373)
T PRK07324 187 AYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANEEVIDILRKYRDYT---MICAGVFDDMLA 263 (373)
T ss_pred CEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCHHHHHHHHHHhCcE---EecCChHHHHHH
Confidence 899999853211 10 10000000000001110000 01111 012233444444
Q ss_pred HHHcc-HHHHHHHHHH-HHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHH
Q psy13453 146 LRSYG-LKGLQAYLRK-HISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRI 223 (764)
Q Consensus 146 L~~lG-~eGy~~~i~~-~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L 223 (764)
...+. .+.+.+..++ .-+..+.+.+.+++++++..+ .|+-+...|-..+. ..+ ..++.++|
T Consensus 264 ~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~-~p~gg~~~~i~~~~--------------~~~--~~~~~~~l 326 (373)
T PRK07324 264 SLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYV-KPKAVSTSFVKLDV--------------DMP--SEDFCLKL 326 (373)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEE-CCCceEEEEEEeCC--------------CCC--HHHHHHHH
Confidence 44442 2333333333 334456677888887777654 45544444432221 011 23566666
Q ss_pred H-hcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 224 I-ARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 224 ~-~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
. +.|..+.-........++|++++. .++.+++.++.|.+..+
T Consensus 327 l~~~gv~v~pg~~F~~~~~iRis~~~---~~~~l~~~l~rl~~~l~ 369 (373)
T PRK07324 327 LKETGVLLVPGNRFDLEGHVRIGYCC---DTETLKKGLKKLSEFLR 369 (373)
T ss_pred HHhcCEEEECccccCCCCeEEEEecC---CHHHHHHHHHHHHHHHH
Confidence 5 557755544444345689999875 47788888888777654
No 464
>PLN00175 aminotransferase family protein; Provisional
Probab=96.71 E-value=0.054 Score=61.52 Aligned_cols=219 Identities=13% Similarity=0.089 Sum_probs=123.2
Q ss_pred eeeHHHHHhhcCCCCCCeEEecCC-CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc-----C
Q psy13453 21 IYESFKATHSLSGTPDQVRLSGLP-DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS-----N 91 (764)
Q Consensus 21 ~YSv~KAa~~LGl~~~~v~~Vpvd-~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~-----~ 91 (764)
+.....+++..|... +.||++ +++.+|+++|++++... +-+++-+.+.-++|.+=+ ++++++ +
T Consensus 149 y~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~~l~~~~~~~-----~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~ 220 (413)
T PLN00175 149 YDSYEATLSMAGAKI---KTVTLRPPDFAVPEDELKAAFTSK-----TRAILINTPHNPTGKMFTREELELIASLCKEND 220 (413)
T ss_pred chhHHHHHHHcCCEE---EEEECCcccCCCCHHHHHHhcCcC-----ceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 345677888999877 999997 46899999999998642 224555678889999855 444443 7
Q ss_pred CCceeccccccc-c----ceeeeecC--CCc-cccccccccccCCccc------------------CCCCcccHHHHHHH
Q psy13453 92 GPLKVGGVLRRV-Y----SSCLVPRG--QKS-LRTTVLFHFLFQHWQI------------------PLGRRFRALKLWMT 145 (764)
Q Consensus 92 ~wlHVDa~l~~~-y----~s~ll~rd--~~~-l~~~~s~~~d~~d~tl------------------e~SRr~~ALklWat 145 (764)
+|+.+|...... | .++.-+.. ... .-.+||=.+....+-+ ..+-....+..+++
T Consensus 221 ~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~ 300 (413)
T PLN00175 221 VLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATATPMQWAA 300 (413)
T ss_pred cEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHHHHHHHHHhhccCCCCHHHHHHH
Confidence 888888853211 1 01100000 000 0001110000000000 00112233334444
Q ss_pred HHHc--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEE-EeeccccccccccccCccCCccHHHHHHHHH
Q psy13453 146 LRSY--GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCF-RLKVRFWDKLDNLFGTISFGDNDLNKAVYDR 222 (764)
Q Consensus 146 L~~l--G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~F-ry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~ 222 (764)
...+ +.+-+.+..++.-+..+.+.+.|++. ++++ .+|+-+...| ++.|.+ .+ -..++.+.
T Consensus 301 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~p~g~~f~~~~~~~~~--------------~~-~~~~~~~~ 363 (413)
T PLN00175 301 VAALRAPESYYEELKRDYSAKKDILVEGLKEV-GFKV-YPSSGTYFVMVDHTPFG--------------FE-NDIAFCEY 363 (413)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCee-cCCCeeEEEEEeccccC--------------CC-CHHHHHHH
Confidence 4444 33335666666677788888999886 6775 4566554333 322111 00 02467777
Q ss_pred HH-hcCcEEEEecee-----CCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 223 II-ARKVIYIVKGSF-----QDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 223 L~-~~G~~~vs~t~l-----~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
|. +.|..+.-.+.+ .+..++|++++. .++++++.++.|.+..
T Consensus 364 ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~---~~e~l~~~~~rL~~~~ 411 (413)
T PLN00175 364 LIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK---DEETLRAAVERMKTKL 411 (413)
T ss_pred HHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC---CHHHHHHHHHHHHHHH
Confidence 76 458766644433 235689999984 5889999988887654
No 465
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=96.69 E-value=0.088 Score=59.48 Aligned_cols=219 Identities=11% Similarity=0.065 Sum_probs=124.2
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
.|+|+..++...|... +.++.+ |.+.+++.+++... .++-+++-..+..++|.+=|++++.+ ++++
T Consensus 141 ~h~s~~~~~~~~g~~~---~~~~~~-----d~~~l~~~l~~~~~-~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~l 211 (410)
T PRK13392 141 NHASMIEGIRRSGAEK---QVFRHN-----DLADLEEQLASVDP-DRPKLIAFESVYSMDGDIAPIEAICDLADRYNALT 211 (410)
T ss_pred hhHHHHHHHHHcCCeE---EEEeCC-----CHHHHHHHHHhccC-CCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEE
Confidence 6888888888888654 555432 56677777765321 22224467778889999988888775 7899
Q ss_pred eecccccc-cc---ceeee-----ecCCCccccccc----c--cc-----cc----CCc--ccCCCCc---ccHHHHHHH
Q psy13453 95 KVGGVLRR-VY---SSCLV-----PRGQKSLRTTVL----F--HF-----LF----QHW--QIPLGRR---FRALKLWMT 145 (764)
Q Consensus 95 HVDa~l~~-~y---~s~ll-----~rd~~~l~~~~s----~--~~-----d~----~d~--tle~SRr---~~ALklWat 145 (764)
.||.+... .+ +..+. ..+.+....+++ . .+ +. ..+ ..-.+-. .....+.++
T Consensus 212 ivDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~GG~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aa 291 (410)
T PRK13392 212 YVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLGGYIAASADLIDFVRSFAPGFIFTTALPPAVAAGATAA 291 (410)
T ss_pred EEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhcccchhhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHH
Confidence 99986531 11 11111 001111111111 0 00 00 000 0011111 122333455
Q ss_pred HHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHH-
Q psy13453 146 LRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRII- 224 (764)
Q Consensus 146 L~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~- 224 (764)
|+.+-. +.+..++..+..+++.+.+++. ++++. +++.+++.+... .+....++.++|.
T Consensus 292 L~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~-----------------~~~~~~~~~~~L~~ 350 (410)
T PRK13392 292 IRHLKT--SQTERDAHQDRVAALKAKLNAN-GIPVM-PSPSHIVPVMVG-----------------DPTLCKAISDRLMS 350 (410)
T ss_pred HHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeC-----------------CHHHHHHHHHHHHH
Confidence 554322 3345577788889999999986 77754 566666655431 1112357888886
Q ss_pred hcCcEEEEec--ee-CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 225 ARKVIYIVKG--SF-QDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 225 ~~G~~~vs~t--~l-~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
+.|....... .+ .+...+|+++.-.+ ++++++.+++.|+++.++
T Consensus 351 ~~GI~v~~~~~p~~~~~~~~lRis~~~~~-t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 351 EHGIYIQPINYPTVPRGTERLRITPTPLH-DDEDIDALVAALVAIWDR 397 (410)
T ss_pred hCCEEEeeeCCCCCCCCCceEEEEECCCC-CHHHHHHHHHHHHHHHHH
Confidence 5676543221 12 34578999765544 578999999999888654
No 466
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=96.69 E-value=0.073 Score=60.76 Aligned_cols=166 Identities=13% Similarity=0.006 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+.|++++..+- ....|+.+|||||-.|++.||.....+ +.. .+.-+|..+..-|
T Consensus 83 ~~~~~lae~L~~~~p~~~---------~~v~f~~SGseA~e~AlklAr~~~~~~-g~~---------~r~~ii~~~~~yH 143 (422)
T PRK05630 83 EPAIKLTRKLLNLTDNGL---------DHVFYSDSGSVSVEVAIKMALQYSKGQ-GHP---------ERTRLLTWRSGYH 143 (422)
T ss_pred HHHHHHHHHHHhhCCCCc---------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCC---------CCcEEEEECCCcC
Confidence 344556667777763211 246899999999999999999864321 100 0112455555566
Q ss_pred hhHHHHHHhCCC-------------ceEEEecCCCCcccH-------HHHHHHHHHhhhcCCCceEEEEeec-cCCcc--
Q psy13453 642 SSVEKSAIIGDV-------------PVRQLRSDDNGVLRG-------DALLTAVKEDLAKGLIPCCLIATLG-TTGTC-- 698 (764)
Q Consensus 642 ~Sv~kAa~~lGl-------------~v~~Vp~d~~g~md~-------~~Le~~I~~~~~~G~~p~~VvataG-TT~~G-- 698 (764)
=...-+..+.+- ++..+|.......+. +.+++.|.+ ...+|++--. ....|
T Consensus 144 G~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~iAAvi~EPi~qg~gG~~ 217 (422)
T PRK05630 144 GDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLIDE------TVAAIIIEPIVQGAGGMR 217 (422)
T ss_pred CccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHhh------ceEEEEEechhcCcCCcc
Confidence 433333332221 234444321111122 333443332 2334443321 12223
Q ss_pred --ccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCC
Q psy13453 699 --AFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLL 755 (764)
Q Consensus 699 --aiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~ 755 (764)
.-+.+++|.++|++||+.|++|-++-|+-....-+.....|+ ..|-+++ -|.++
T Consensus 218 ~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDi~t~--gK~l~ 273 (422)
T PRK05630 218 FHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGV-TPDIMCV--GKALT 273 (422)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCC-CCCeeee--echhh
Confidence 346899999999999999999999866422111111222355 4676654 67763
No 467
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=96.69 E-value=0.058 Score=60.74 Aligned_cols=217 Identities=11% Similarity=0.037 Sum_probs=117.4
Q ss_pred eHHHHHhhcCCCCCCeEEecCC--CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc-----CC
Q psy13453 23 ESFKATHSLSGTPDQVRLSGLP--DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS-----NG 92 (764)
Q Consensus 23 Sv~KAa~~LGl~~~~v~~Vpvd--~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~-----~~ 92 (764)
...++++.+|+.. +.+|++ +++.+|+++|++++++. +.+++-+.++.++|.+=+ +.++++ ++
T Consensus 131 ~~~~~~~~~g~~v---~~~~~~~~~~~~~d~~~l~~~~~~~-----~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~ 202 (401)
T TIGR01264 131 LYETLAESMGIEV---KLYNLLPDKSWEIDLKQLESLIDEK-----TAALIVNNPSNPCGSVFSRQHLEEILAVAERQCL 202 (401)
T ss_pred hHHHHHHHcCCEE---EEeecCCccCCCCCHHHHHHHhccC-----ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCC
Confidence 3456788899876 888886 35799999999988653 234545567889998844 555554 78
Q ss_pred Cceeccccccc-c-----ceee-eecCCCc-cccccccccccCCcccCCCC----------------------------c
Q psy13453 93 PLKVGGVLRRV-Y-----SSCL-VPRGQKS-LRTTVLFHFLFQHWQIPLGR----------------------------R 136 (764)
Q Consensus 93 wlHVDa~l~~~-y-----~s~l-l~rd~~~-l~~~~s~~~d~~d~tle~SR----------------------------r 136 (764)
|+.+|.+.... | .++. +..+... .-.+||=. |.+.|-| .
T Consensus 203 ~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~-----~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~~~~ 277 (401)
T TIGR01264 203 PIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKR-----WLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQRILG 277 (401)
T ss_pred EEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCccc-----CCCccceEEEEEecCcchhHHHHHHHHHHHhhccCC
Confidence 99988853211 1 1100 0000000 00111100 0111111 1
Q ss_pred ccHHHHHHHHHHc--cHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEE-EeeccccccccccccCccCCc
Q psy13453 137 FRALKLWMTLRSY--GLKG-LQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCF-RLKVRFWDKLDNLFGTISFGD 212 (764)
Q Consensus 137 ~~ALklWatL~~l--G~eG-y~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~F-ry~P~~~~~~~~~~~~~~~~~ 212 (764)
...+..+++...+ +.++ +.+..+...+..+++.+.|++.+++.. ..|+-+...| ++...... ...
T Consensus 278 ~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~-~~p~~g~f~~~~~~~~~~~----------~~~ 346 (401)
T TIGR01264 278 PCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRP-VMPSGAMYMMVGIEMEHFP----------EFK 346 (401)
T ss_pred CCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc-cCCCeeeEEEEEecccccC----------CCC
Confidence 1223333332322 2234 444455555566778889988877664 3454444444 32110000 001
Q ss_pred cHHHHHHHHHHH-hcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 213 NDLNKAVYDRII-ARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 213 d~~n~~L~~~L~-~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
+ ..++.+++. +.|..+..........++|++++.+ ++.++..++.|.++.+
T Consensus 347 ~--~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~~---~~~l~~~l~rl~~~~~ 398 (401)
T TIGR01264 347 N--DVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTVP---VVMMEEACSRIQEFCE 398 (401)
T ss_pred C--HHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcCC---HHHHHHHHHHHHHHHh
Confidence 1 245667765 6787665444444457999999864 6788888888877654
No 468
>PRK07682 hypothetical protein; Validated
Probab=96.67 E-value=0.045 Score=61.01 Aligned_cols=220 Identities=9% Similarity=0.047 Sum_probs=122.2
Q ss_pred eeHHHHHhhcCCCCCCeEEecCC--CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCccccccc---Cchhhhc-----C
Q psy13453 22 YESFKATHSLSGTPDQVRLSGLP--DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQ---SLNAPVS-----N 91 (764)
Q Consensus 22 YSv~KAa~~LGl~~~~v~~Vpvd--~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iD---pi~~ia~-----~ 91 (764)
.....+++.+|... +.+|++ +++.+|+++|++++.+. +-+++-+.++-++|.+= .+.++++ +
T Consensus 116 ~~~~~~~~~~g~~~---~~~~~~~~~~~~~d~~~l~~~~~~~-----~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~ 187 (378)
T PRK07682 116 VSYAPLVTLAGGVP---VPVATTLENEFKVQPAQIEAAITAK-----TKAILLCSPNNPTGAVLNKSELEEIAVIVEKHD 187 (378)
T ss_pred hhhHHHHHHcCCEE---EEeecCCccCCCCCHHHHHhhcCcc-----cEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcC
Confidence 34666788888765 888886 36899999999988652 22444456788999874 3555554 7
Q ss_pred CCceeccccccc-----cceee-eec-CCCc-ccccccc---------ccccC---------CcccCCCCcccHHHHHHH
Q psy13453 92 GPLKVGGVLRRV-----YSSCL-VPR-GQKS-LRTTVLF---------HFLFQ---------HWQIPLGRRFRALKLWMT 145 (764)
Q Consensus 92 ~wlHVDa~l~~~-----y~s~l-l~r-d~~~-l~~~~s~---------~~d~~---------d~tle~SRr~~ALklWat 145 (764)
+++.+|...... ..++. +.. +... .-.+||= .+-.. ...-..+.....+...++
T Consensus 188 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~~~~~~~~~~~~~q~a~ 267 (378)
T PRK07682 188 LIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQYSMMCAPTMAQFAA 267 (378)
T ss_pred cEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHHHHHHHHHHHhhccCCCHHHHHHH
Confidence 888888853211 11110 000 0000 0001110 00000 000000112233444444
Q ss_pred HHHc--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHH
Q psy13453 146 LRSY--GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRI 223 (764)
Q Consensus 146 L~~l--G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L 223 (764)
...+ |.+-+.++.++.-+..+++.+.|+++ ++++ ..|+-+...|...++. ..+ ..++.+++
T Consensus 268 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~-~~p~g~~~~~~~~~~~-------------~~~--~~~~~~~l 330 (378)
T PRK07682 268 LEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI-GLTC-HVPGGAFYAFPSISST-------------GLS--SEEFAEQL 330 (378)
T ss_pred HHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC-CCcc-CCCCeeEEEEEeccCC-------------CCC--HHHHHHHH
Confidence 4444 44445566666677788889999886 7764 5566665555322110 111 24567776
Q ss_pred H-hcCcEEEEecee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 224 I-ARKVIYIVKGSF--QDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 224 ~-~~G~~~vs~t~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
. +.|..+...... .+..++|+++++ +.+.+++.++.|+++.+.
T Consensus 331 l~~~gv~v~pg~~f~~~~~~~iRis~~~---~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 331 LLEEKVAVVPGSVFGESGEGFIRCSYAT---SLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred HHhCCEEEcCchhhCcCCCCeEEEEeCC---CHHHHHHHHHHHHHHHhh
Confidence 5 568765543333 235799999885 478899999988876543
No 469
>KOG1549|consensus
Probab=96.67 E-value=0.023 Score=63.77 Aligned_cols=227 Identities=17% Similarity=0.037 Sum_probs=125.3
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
-|=|+.++++.|-=.--.|+.||+++++-.|++.++++|+.++. ++.-.+=+.+.|+.-|+++|.+ ++.+
T Consensus 140 eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~-----lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v 214 (428)
T KOG1549|consen 140 EHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIRSKTR-----LVSIMHVNNEIGVLQPVKEIVKICREEGVQV 214 (428)
T ss_pred cCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcCCCce-----EEEEEecccCccccccHHHHHHHhCcCCcEE
Confidence 45666677766633323459999999999999999999998532 4435666788999999999995 8889
Q ss_pred eecccc--------------------ccc-c----ceeeeecC-CCccccccccccccCCcccCCCC-----cccHHHHH
Q psy13453 95 KVGGVL--------------------RRV-Y----SSCLVPRG-QKSLRTTVLFHFLFQHWQIPLGR-----RFRALKLW 143 (764)
Q Consensus 95 HVDa~l--------------------~~~-y----~s~ll~rd-~~~l~~~~s~~~d~~d~tle~SR-----r~~ALklW 143 (764)
|+||+. .|+ | .++|.+|. ..-++-. ..-.+-...++.| -..++.+=
T Consensus 215 ~~DaAQavG~i~vDV~eln~D~~s~s~HK~ygp~~iGaLYvr~~~~~~~~~---p~~~GGgq~r~~rsGT~~~~~~~~~g 291 (428)
T KOG1549|consen 215 HVDAAQAVGKIPVDVQELNADFLSISAHKIYGPPGIGALYVRRKRPRLRVE---PPLSGGGQERGLRSGTVATPLAVGLG 291 (428)
T ss_pred EeehhhhcCCccccHHHcCchheeeecccccCCCcceEEEEccCCCccccc---CcccCCccccccccCCcCchhhhhhH
Confidence 999952 122 2 24566654 2212211 1112223333333 11122222
Q ss_pred HHHHHc--cHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEeCC-----CCceeEEEEeeccccccccccccCccCCccHH
Q psy13453 144 MTLRSY--GLKGLQAYLRKHISLAKKFADLVEQ-DDRFELVCP-----PSMGLVCFRLKVRFWDKLDNLFGTISFGDNDL 215 (764)
Q Consensus 144 atL~~l--G~eGy~~~i~~~i~lA~~l~~~I~~-~p~~ell~~-----P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~ 215 (764)
.+.+.. ...++...+++ +-..+...+.. .++..+.+. |.+..+.|.|. .+.... .+.+++
T Consensus 292 sA~e~~~~~~~~~~~~~~~---~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~-~g~~~~--------~~~~~~ 359 (428)
T KOG1549|consen 292 SAAEFVNKEMAYDEAIIKR---LSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPYV-EGESLL--------MDLKDV 359 (428)
T ss_pred HHHHHHHhhcchhHHHHHH---HHHHHHHHHhhhCchhhccCCcccccccceeeecccc-cCcchh--------hhhhhh
Confidence 233332 22233333333 55556666544 566666554 44566667642 221100 011111
Q ss_pred H-----------HHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 216 N-----------KAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 216 n-----------~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
. .+..-.|...|. ..-.....+|+.+. -+|++++++.+.+.+.+.+..+..
T Consensus 360 ~l~s~~a~~~~~~epsy~l~~~G~-----~~~~~~~~iRis~G-~y~t~~di~~~~~~i~~~v~~~~~ 421 (428)
T KOG1549|consen 360 ALSSGSACTSASLEPSYVLRAIGV-----DEDLAHSSIRISIG-RYTTEEDIDYLVDAIKKLVSLLRE 421 (428)
T ss_pred hhcccchhhcCCCCcchhhhhcCc-----chhhhcceeEEeee-eeCcHHHHHHHHHHHHHHHHhccc
Confidence 1 122222333332 01113568999655 456788999999999998876543
No 470
>PRK07046 aminotransferase; Validated
Probab=96.66 E-value=0.045 Score=63.06 Aligned_cols=161 Identities=19% Similarity=0.127 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+..|.++.+.++++++++ ...|+.+||||+..|+++||.... + +.++.....-
T Consensus 114 ~~~~~~lAe~l~~~~~~~-----------~v~F~nSGtEA~e~AlrlAR~~TG-r---------------~~ii~~~g~Y 166 (453)
T PRK07046 114 SEDAAWVGEELARRFGLP-----------YWQVATTATDANRFVLRWARAVTG-R---------------PKILVFNGCY 166 (453)
T ss_pred CHHHHHHHHHHHHHhCCC-----------EEEEECCHHHHHHHHHHHHHHhhC-C---------------CEEEEECCCC
Confidence 567788888899888643 358999999999999999997621 1 1122223223
Q ss_pred chhHHHHH------------HhCCC------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc
Q psy13453 641 NSSVEKSA------------IIGDV------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN 702 (764)
Q Consensus 641 H~Sv~kAa------------~~lGl------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp 702 (764)
|=...-.. ...|+ .+..+|-+ |+++|++.+.. + ...+|+.---....|.+-|
T Consensus 167 HG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n-----d~~~l~~~l~~----~-~vAavi~EPi~g~~G~~~p 236 (453)
T PRK07046 167 HGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFN-----DLAALEAALAD----G-DVAAVLAEPAMTNIGMVLP 236 (453)
T ss_pred CCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCC-----CHHHHHHHhCC----C-CeEEEEECCCCCCCCCcCC
Confidence 32110000 01122 12222221 68899988842 2 2445554433333455544
Q ss_pred ----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 703 ----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 703 ----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
++++.++|++||+.|++|-.+....-+-. .... -|+ ..|-+++ -|.++.=+.+|++
T Consensus 237 ~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg-~~~~-~gv-~PDi~t~--gK~lggG~Pi~av 296 (453)
T PRK07046 237 EPGFHEALRELTRRYGTLLVIDETHTISSGPGG-YTRA-HGL-EPDFLVV--GKPIAGGVPCAVY 296 (453)
T ss_pred CHHHHHHHHHHHHHhCCEEEEEccccCccCCcc-hhHH-hCC-Cccceee--hhhhcCCCcceee
Confidence 89999999999999999998741000001 1111 255 4677664 6766654556654
No 471
>KOG1357|consensus
Probab=96.66 E-value=0.013 Score=65.41 Aligned_cols=171 Identities=14% Similarity=0.177 Sum_probs=113.1
Q ss_pred CCCCCccccccCCCC-ChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCC-
Q psy13453 519 HWQSPQFNAYFPTGS-SYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQST- 596 (764)
Q Consensus 519 ~~~~P~~~~~~~~~~-~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsG- 596 (764)
+.++-+|++|-.+.. .....+..+-.-.++......+. ..+.+-+++-+.+|+++|.++ .-+|..|
T Consensus 140 NlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~--G~~~~hkelE~l~A~f~g~e~----------a~vF~mGf 207 (519)
T KOG1357|consen 140 NLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEA--GTTEEHKELEELVARFLGVED----------AIVFSMGF 207 (519)
T ss_pred eecccccccccccCCcCChHHHHHHHHhcccccccchhc--ccHHHHHHHHHHHHHhcCCcc----------eEEEeccc
Confidence 455677888865433 33333333333334443333333 345666777788999999876 3456554
Q ss_pred hHHH-HHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHH
Q psy13453 597 ASEA-TLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAV 675 (764)
Q Consensus 597 gTeA-Nl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I 675 (764)
||-| |+.++ .-+..-|+-.+..|-|+.-.|++.|..+|.-.-+ |+..||+.|
T Consensus 208 ~TNs~~~p~l----------------------~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN-----dm~~LEr~L 260 (519)
T KOG1357|consen 208 ATNSMNIPSL----------------------LGKGSLIISDELNHASLITGARLSGATTRVFRHN-----DMQGLERLL 260 (519)
T ss_pred cccccCccee----------------------ecCCcceeeccccchheeccccccCceEEEEecC-----CHHHHHHHH
Confidence 1211 11111 1123457788899999999999999988876654 378899999
Q ss_pred HHhhhcCCC----c--eEEEEeecc-CCccccccHHHHHHHHHhcCCEEEEecccccccc
Q psy13453 676 KEDLAKGLI----P--CCLIATLGT-TGTCAFDNLEELGPICQEYNIWLHVDAAYAGSAL 728 (764)
Q Consensus 676 ~~~~~~G~~----p--~~VvataGT-T~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l 728 (764)
++....|.. | .++++.-|= ..-|.++++.++.+++++|..+||+|.|+..+++
T Consensus 261 rd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~ 320 (519)
T KOG1357|consen 261 RDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAM 320 (519)
T ss_pred HHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeecccccccc
Confidence 888776642 2 233333333 3679999999999999999999999999988876
No 472
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=96.65 E-value=0.059 Score=61.63 Aligned_cols=171 Identities=15% Similarity=0.043 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+..+.++.+.|++++..+- ....|+.+|||||-.|++.||.....+ +..+ ++-+|.....-
T Consensus 86 ~~~~~~lae~L~~~~p~~~---------~~v~f~~sGseAve~AlklAr~~~~~~-g~~~---------r~~ii~~~~~y 146 (429)
T PRK06173 86 HEPAVELAQKLLEILPPSL---------NKIFFADSGSVAVEVAMKMALQYQQAK-GEVQ---------RTKFATIRSGY 146 (429)
T ss_pred CHHHHHHHHHHHhhCCCCc---------CEEEEeCCchHHHHHHHHHHHHHHHHh-CCCC---------CcEEEEECCCc
Confidence 3455667777777763211 246899999999999999999764221 1000 11234444444
Q ss_pred chhHHHHHHhCC------------C-ceEEEecCCC------CcccHHHHHHHHHHhhhcCCCceEEEEeec-cCCcccc
Q psy13453 641 NSSVEKSAIIGD------------V-PVRQLRSDDN------GVLRGDALLTAVKEDLAKGLIPCCLIATLG-TTGTCAF 700 (764)
Q Consensus 641 H~Sv~kAa~~lG------------l-~v~~Vp~d~~------g~md~~~Le~~I~~~~~~G~~p~~VvataG-TT~~Gai 700 (764)
|=.-.-+..+.| + .+..+|.... ..-+++.|++.|++. +..+.+|++--- ....|.+
T Consensus 147 HG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~---~~~iAAvi~EPi~qg~gG~~ 223 (429)
T PRK06173 147 HGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQK---GDEIAALILEPVVQGAGGMY 223 (429)
T ss_pred CCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhC---CCcEEEEEEcchhhccCCcc
Confidence 432222221111 1 2334443211 112467777877532 233445444332 2223433
Q ss_pred ----ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC
Q psy13453 701 ----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 701 ----Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~ 756 (764)
+=+++|+++|++||++|++|-++-|+-....-+....-|+ ..|-++ +-|.++.
T Consensus 224 ~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~--~gK~l~g 280 (429)
T PRK06173 224 FYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGV-VPDIMC--IGKALTG 280 (429)
T ss_pred cCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCC-CCCEEE--eehhhhC
Confidence 4688899999999999999999866311111111122355 467666 5777643
No 473
>PRK09082 methionine aminotransferase; Validated
Probab=96.64 E-value=0.03 Score=62.71 Aligned_cols=217 Identities=8% Similarity=0.005 Sum_probs=117.0
Q ss_pred eeeHHHHHhhcCCCCCCeEEecCC-CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc---cCchhhhc-----C
Q psy13453 21 IYESFKATHSLSGTPDQVRLSGLP-DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI---QSLNAPVS-----N 91 (764)
Q Consensus 21 ~YSv~KAa~~LGl~~~~v~~Vpvd-~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i---Dpi~~ia~-----~ 91 (764)
+-++.++++..|... +.+|++ +++.+|+++|++++++. +-+++.+.+.-++|.+ ++++++.+ +
T Consensus 125 y~~~~~~~~~~g~~~---~~~~~~~~~~~~d~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~ 196 (386)
T PRK09082 125 YDSYAPAIELAGGRA---VRVALQPPDFRVDWQRFAAAISPR-----TRLIILNTPHNPSGTVWSAADMRALWQLIAGTD 196 (386)
T ss_pred chhhHHHHHHcCCEE---EEEecCcccccCCHHHHHHhcCcc-----ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCC
Confidence 346778888888766 999997 46899999999998642 1244555677899977 67777664 8
Q ss_pred CCceeccccccc-c-----ceeeeecC-CCccc--cccccccc------------------cCCcccCCCCcccHHHHHH
Q psy13453 92 GPLKVGGVLRRV-Y-----SSCLVPRG-QKSLR--TTVLFHFL------------------FQHWQIPLGRRFRALKLWM 144 (764)
Q Consensus 92 ~wlHVDa~l~~~-y-----~s~ll~rd-~~~l~--~~~s~~~d------------------~~d~tle~SRr~~ALklWa 144 (764)
+|+.+|...... | .++.-... ..... .+|+=.+. +....-........+..++
T Consensus 197 i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~~~~~~~~~~~~~~q~~ 276 (386)
T PRK09082 197 IYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALSAEFRKVHQYNTFTVNTPAQLA 276 (386)
T ss_pred EEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHHHHHHHHHHhhhcCCCChHHHHH
Confidence 899988863211 1 11100000 00000 01110000 0000000111223333333
Q ss_pred HHHHc--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEE-EeeccccccccccccCccCCccHHHHHHHH
Q psy13453 145 TLRSY--GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCF-RLKVRFWDKLDNLFGTISFGDNDLNKAVYD 221 (764)
Q Consensus 145 tL~~l--G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~F-ry~P~~~~~~~~~~~~~~~~~d~~n~~L~~ 221 (764)
+...+ +.+-++++.+..-+..+++.+.+++. ++++ .+|+-+...| ++. +- .+.+ ..++.+
T Consensus 277 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~-~~~~g~~~~~~~~~-~~------------~~~~--~~~~~~ 339 (386)
T PRK09082 277 LADYLRAEPEHYLELPAFYQAKRDRFRAALANS-RFKL-LPCEGTYFQLVDYS-AI------------SDLD--DVEFCQ 339 (386)
T ss_pred HHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC-CCcc-cCCCeeEEEEEecc-cc------------CCCC--HHHHHH
Confidence 33333 34444444455556667788888873 6664 4566665444 432 10 0111 145666
Q ss_pred HHH-hcCcEEEEecee----CCeeEEEEeccCCCCCHHHHHHHHHHHHH
Q psy13453 222 RII-ARKVIYIVKGSF----QDRLFMRFAICSSQTEESDVQLGWNEIRT 265 (764)
Q Consensus 222 ~L~-~~G~~~vs~t~l----~g~~~LRi~v~np~Tt~e~i~~~l~~l~~ 265 (764)
.|. +.|.++.....+ .+..++|++++. .++.+++.++.|++
T Consensus 340 ~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~---~~~~l~~~~~rl~~ 385 (386)
T PRK09082 340 WLTREHGVAAIPLSVFYADPFPHRLVRLCFAK---QEETLDAAAERLCQ 385 (386)
T ss_pred HHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC---CHHHHHHHHHHHhh
Confidence 654 557655443333 124689999875 47888888887764
No 474
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=96.63 E-value=0.041 Score=60.79 Aligned_cols=210 Identities=5% Similarity=-0.029 Sum_probs=119.1
Q ss_pred eHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-------CCCce
Q psy13453 23 ESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-------NGPLK 95 (764)
Q Consensus 23 Sv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-------~~wlH 95 (764)
....++...|.+. +.+|++ ++.+|+++|++++++. +-+++-+-++-++|.+=|.+++.+ ++++-
T Consensus 117 ~~~~~~~~~g~~~---~~~~~~-~~~~d~~~l~~~~~~~-----~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii 187 (359)
T PRK03158 117 QYRHNAIIEGAEV---REVPLK-DGGHDLEAMLKAIDEQ-----TKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVV 187 (359)
T ss_pred HHHHHHHHcCCeE---EEEecC-CCCcCHHHHHHhcCCC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEE
Confidence 3567788888876 999998 6889999999888542 235544678999999988777443 56777
Q ss_pred eccccccc-cc--------------eeeeec-CCCccc-cccccccccCC------c-ccCCCCcccHHHHHHHHHHccH
Q psy13453 96 VGGVLRRV-YS--------------SCLVPR-GQKSLR-TTVLFHFLFQH------W-QIPLGRRFRALKLWMTLRSYGL 151 (764)
Q Consensus 96 VDa~l~~~-y~--------------s~ll~r-d~~~l~-~~~s~~~d~~d------~-tle~SRr~~ALklWatL~~lG~ 151 (764)
+|.+.... +. ..+..+ -.+.+. ..+...+-... + .....=....+...++...+-.
T Consensus 188 ~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 267 (359)
T PRK03158 188 LDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLNIARPPFNTTRIAQYAAIAALED 267 (359)
T ss_pred EECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHHHHHHHHhcCCCCCCHHHHHHHHHHhcC
Confidence 77753111 00 001100 011100 00000000000 0 0000012345555555555544
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEE
Q psy13453 152 KGLQAY-LRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIY 230 (764)
Q Consensus 152 eGy~~~-i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~ 230 (764)
..|.+. .+..-+..+++.+.+++. ++.+. ++.-+.+..+.. .+ ..++.++|.+.|..+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~g~~i~~~~~-----------------~~--~~~~~~~l~~~gv~v 326 (359)
T PRK03158 268 QAFLKECVEKNAEGLEQYYAFCKEY-GLFYY-PSQTNFIFVDTG-----------------RD--ANELFEALLKKGYIV 326 (359)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC-CCeeC-CCcCcEEEEECC-----------------CC--HHHHHHHHHHCCeEE
Confidence 444433 344455566777888776 67654 444433333221 01 246778888888766
Q ss_pred EEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 231 IVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 231 vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
..........++|+++. ++++.+.+++.|+++
T Consensus 327 ~~g~~f~~~~~iRi~~~----~~~~~~~l~~al~~~ 358 (359)
T PRK03158 327 RSGAALGFPTGVRITIG----LKEQNDKIIELLKEL 358 (359)
T ss_pred eeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHh
Confidence 65544444578999866 788999999998764
No 475
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=96.61 E-value=0.092 Score=60.00 Aligned_cols=168 Identities=14% Similarity=0.012 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
...++.++|+++++-+- ....|+.+||+||..|++.||.....+ +..+ ++-++..+..-|-
T Consensus 89 ~~~~la~~l~~~~~~~~---------~~v~f~~sGseA~e~AlklAr~~~~~~-~~~~---------r~~il~~~~~yHG 149 (427)
T TIGR00508 89 PAIELCQKLVKMTPNAL---------DCVFLADSGSVAVEVALKMALQYWQAK-GEKN---------RQKFLTIRSGYHG 149 (427)
T ss_pred HHHHHHHHHHhhCCCCC---------CEEEEeCCcHHHHHHHHHHHHHHHHhh-CCCC---------ccEEEEEcCCcCC
Confidence 34556777777764221 246899999999999999999875322 1100 1224555656664
Q ss_pred hHHHHHHhCCC-------------ceEEEecCCC-C-----cccHHHHHHHHHHhhhcCCCceEEEEeec-cCCcc----
Q psy13453 643 SVEKSAIIGDV-------------PVRQLRSDDN-G-----VLRGDALLTAVKEDLAKGLIPCCLIATLG-TTGTC---- 698 (764)
Q Consensus 643 Sv~kAa~~lGl-------------~v~~Vp~d~~-g-----~md~~~Le~~I~~~~~~G~~p~~VvataG-TT~~G---- 698 (764)
...-+..+.|. .+..+|.... . .-|.+++++.+.+. +....+|++--- +...|
T Consensus 150 ~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~---~~~vaavivEPv~~g~gG~~~~ 226 (427)
T TIGR00508 150 DTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELH---SDEIAAVILEPIVQGAGGMRFY 226 (427)
T ss_pred ccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhc---CCcEEEEEEechhcCcCCcccC
Confidence 33323222221 1223322111 1 12567777787642 222333333221 22222
Q ss_pred ccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCC
Q psy13453 699 AFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLL 755 (764)
Q Consensus 699 aiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~ 755 (764)
..+.+.+|+++|++||+.|++|-++.|.-....-+.....|+ ..|-++ .-|.++
T Consensus 227 ~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v-~pDi~~--~gK~l~ 280 (427)
T TIGR00508 227 HPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGV-VPDILC--VGKALT 280 (427)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCC-CCCEEE--echhhh
Confidence 357999999999999999999999865322111112212344 457565 467654
No 476
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=96.61 E-value=0.089 Score=58.61 Aligned_cols=215 Identities=8% Similarity=-0.020 Sum_probs=120.0
Q ss_pred eeHH-HHHhhcCCCCCCeEEecCCC---CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-------
Q psy13453 22 YESF-KATHSLSGTPDQVRLSGLPD---SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS------- 90 (764)
Q Consensus 22 YSv~-KAa~~LGl~~~~v~~Vpvd~---~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~------- 90 (764)
|+.. .+++..|... +.||+++ .+++|+++|.+++... ++-+++-+-++.++|.+=+.+++.+
T Consensus 111 y~~~~~~~~~~g~~~---~~v~~~~~~~~~~~d~~~l~~~~~~~----~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~ 183 (364)
T PRK04781 111 FGMYAVCARLQNAPL---VEVPLVDGADGFHADVPAIVAAALAS----NAKLVFLCSPSNPAGSAIALDQIERALQALQG 183 (364)
T ss_pred hHHHHHHHHHcCCEE---EEEecCCCccCCCcCHHHHHHHHhcc----CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCC
Confidence 5543 4568888877 9999842 3578999987655321 2235544569999999977766443
Q ss_pred CCCceeccccccc-c-c----------eeeeecC-CCccc-cccccccccCCc-------ccCCCCcccHHHHHHHHHHc
Q psy13453 91 NGPLKVGGVLRRV-Y-S----------SCLVPRG-QKSLR-TTVLFHFLFQHW-------QIPLGRRFRALKLWMTLRSY 149 (764)
Q Consensus 91 ~~wlHVDa~l~~~-y-~----------s~ll~rd-~~~l~-~~~s~~~d~~d~-------tle~SRr~~ALklWatL~~l 149 (764)
+.|+.+|.+.... + . .++..+. .+.+- ..+...|-.+.. .....-....+...++...+
T Consensus 184 ~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~~~~~~~~~~~a~~~l 263 (364)
T PRK04781 184 KALVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAPYPVPTPCAALAEQAL 263 (364)
T ss_pred CcEEEEeCcchhhcCCcchHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhccCCCCCCHHHHHHHHHHH
Confidence 5688888864211 0 0 1111111 00000 000000100000 00000012233333333333
Q ss_pred --c-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhc
Q psy13453 150 --G-LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIAR 226 (764)
Q Consensus 150 --G-~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~ 226 (764)
| .+-+.+.+++..+..+++.+.|++.+++..+.++.-+-+-+++. + ..++.++|.+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~----------------~----~~~~~~~l~~~ 323 (364)
T PRK04781 264 SAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD----------------D----AEAAFQALLAA 323 (364)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC----------------C----HHHHHHHHHHC
Confidence 3 34456667777777888999999988875445555444334331 1 24678888899
Q ss_pred CcEEEEeceeC-CeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 227 KVIYIVKGSFQ-DRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 227 G~~~vs~t~l~-g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
|..+....... ...++|+++. ++++.+.+++.++++.
T Consensus 324 gI~v~~~~~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 324 GVVVRDQRAAPRLSDALRITLG----TPEQNDRVLAALQRTQ 361 (364)
T ss_pred CeEEeeCCCCCCCCCeEEEeCC----CHHHHHHHHHHHHHHH
Confidence 98776554332 2468999887 4678888988887753
No 477
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=96.61 E-value=0.0065 Score=66.07 Aligned_cols=125 Identities=19% Similarity=0.239 Sum_probs=86.2
Q ss_pred EEecCCcchhHHHHH-HhCCCceEEEecC----------CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcc---c
Q psy13453 634 AYTSDQSNSSVEKSA-IIGDVPVRQLRSD----------DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTC---A 699 (764)
Q Consensus 634 i~~S~~aH~Sv~kAa-~~lGl~v~~Vp~d----------~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~G---a 699 (764)
+.+.+..|+-.-++- ...|.-.+.|+++ -.|.+|++.|++.|++...+ .+|.++.....++..| +
T Consensus 126 ~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~-nvp~I~~tiT~NsagGQpVS 204 (471)
T COG3033 126 MVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGAD-NVPYIVLTITNNSAGGQPVS 204 (471)
T ss_pred ccccccceecchhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcc-cCcEEEEEEeccccCCCcch
Confidence 445567777766663 3345545555553 35789999999999886543 3576655555555555 5
Q ss_pred cccHHHHHHHHHhcCCEEEEeccc-cccccccc----hhhhh------hcCCCcccEEEEcCCccCCCCcC
Q psy13453 700 FDNLEELGPICQEYNIWLHVDAAY-AGSALLLP----EYAHL------KRGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 700 iDpl~eIa~i~~~~glwLHVDaA~-Gg~~l~~~----~~r~~------l~gie~aDSit~d~HK~l~~P~~ 759 (764)
.+++.++++||++|++.+..|+|- +=.+.|.. .|+.. -.-++.||-++.|+-|=..++.|
T Consensus 205 m~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmG 275 (471)
T COG3033 205 MANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMG 275 (471)
T ss_pred HHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccc
Confidence 689999999999999999999983 33444442 22221 12245799999999999988876
No 478
>PRK06917 hypothetical protein; Provisional
Probab=96.60 E-value=0.1 Score=60.07 Aligned_cols=172 Identities=13% Similarity=0.024 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+..+.++.+.|++++.... ....|+++|||||..|++.||.....+ +..+ ++.++.....-
T Consensus 73 ~~~~~~lae~L~~~~p~~~---------~~v~f~~sGsEAve~AlklAr~~~~~r-g~t~---------r~~ii~~~~~y 133 (447)
T PRK06917 73 SEPAEKLAKKLSDLSPGDL---------NWSFFVNSGSEANETAMKIAIQHFQER-GIQG---------KHKILSRWMSY 133 (447)
T ss_pred CHHHHHHHHHHHHhCCCCC---------CEEEEeCChHHHHHHHHHHHHHHHHhc-CCCC---------CCEEEEECCCc
Confidence 4556678888888774321 246899999999999999999865322 1110 12234444445
Q ss_pred chhHHHHHHhCCC------------ceEEEecCCCCc------------ccHHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 641 NSSVEKSAIIGDV------------PVRQLRSDDNGV------------LRGDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 641 H~Sv~kAa~~lGl------------~v~~Vp~d~~g~------------md~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
|=...-+..+.|. .+..+|.....+ -+.+.|++.+++.. +..+.+|++---...
T Consensus 134 HG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~iAAvi~EPi~g~ 211 (447)
T PRK06917 134 HGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIG--AEHIAAFIAEPIIGA 211 (447)
T ss_pred CCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcC--CCceEEEEEeccccC
Confidence 5333333333221 123333211111 13456677765321 123455554432222
Q ss_pred cc-c----cccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC
Q psy13453 697 TC-A----FDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 697 ~G-a----iDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~ 756 (764)
.| . -+=+++|.++|++||+.|++|-.+.|+-....-+....-|+ ..|-+++ -|.++.
T Consensus 212 ~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv-~PDi~~~--gK~l~~ 273 (447)
T PRK06917 212 AGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGV-EPDIMTL--GKGLGA 273 (447)
T ss_pred cCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCC-CCCEEEe--eehhcc
Confidence 22 2 24588999999999999999999887423222222222355 3676555 676654
No 479
>PRK08363 alanine aminotransferase; Validated
Probab=96.60 E-value=0.08 Score=59.54 Aligned_cols=224 Identities=8% Similarity=0.026 Sum_probs=122.0
Q ss_pred eeeHHHHHhhcCCCCCCeEEe-cCCC-CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc-----
Q psy13453 21 IYESFKATHSLSGTPDQVRLS-GLPD-SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS----- 90 (764)
Q Consensus 21 ~YSv~KAa~~LGl~~~~v~~V-pvd~-~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~----- 90 (764)
+.+...++..+|... +.+ ++++ .+++|+++|++++.+. +.+++-+-++-++|.+=+ ++++++
T Consensus 127 y~~~~~~~~~~g~~~---v~~~~~~~~~~~~d~~~l~~~~~~~-----~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~ 198 (398)
T PRK08363 127 YPPYTGLVKFYGGVP---VEYRTIEEEGWQPDIDDIRKKITEK-----TKAIAVINPNNPTGALYEKKTLKEILDIAGEH 198 (398)
T ss_pred CcchHHHHHHcCCEE---EEeccccccCCcCCHHHHHhhCCcc-----eEEEEEECCCCCCCcCcCHHHHHHHHHHHHHc
Confidence 445667888888765 666 5654 5689999999988642 235544677888998755 666654
Q ss_pred CCCceeccccccc-c----ceee-eecCCCcc-ccccccccccCC----ccc------------------C-CCCcccHH
Q psy13453 91 NGPLKVGGVLRRV-Y----SSCL-VPRGQKSL-RTTVLFHFLFQH----WQI------------------P-LGRRFRAL 140 (764)
Q Consensus 91 ~~wlHVDa~l~~~-y----~s~l-l~rd~~~l-~~~~s~~~d~~d----~tl------------------e-~SRr~~AL 140 (764)
++++.+|.+.... | .++. +....... -.+|+-.+-... |-+ . ..-....+
T Consensus 199 ~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~ 278 (398)
T PRK08363 199 DLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTP 278 (398)
T ss_pred CeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChH
Confidence 7888888853210 0 0100 00000000 001110000000 000 0 00012222
Q ss_pred HHHHHHHHc--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHH
Q psy13453 141 KLWMTLRSY--GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKA 218 (764)
Q Consensus 141 klWatL~~l--G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~ 218 (764)
..+++...+ ..+-+++..++..+..+++.+.+++++++++ ..|+-+.+.|--.|... ..+. ...
T Consensus 279 ~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~-~~p~g~~~~~~~l~~~~------------~~~~-~~~ 344 (398)
T PRK08363 279 AQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGIST-TKPQGAFYIFPRIEEGP------------WKDD-KEF 344 (398)
T ss_pred HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCCEe-cCCCeEEEEEEEeccCC------------CCCH-HHH
Confidence 233333333 3455566666777777888899998888774 56777777772222100 0011 123
Q ss_pred HHHHHHhcCcEEEEecee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 219 VYDRIIARKVIYIVKGSF--QDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 219 L~~~L~~~G~~~vs~t~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
+.+.|.+.|......+.. .+..++|++++. ++++++..++.|+++.++
T Consensus 345 ~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~---~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 345 VLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLP---PVEILEEAMDRFEEFMRE 394 (398)
T ss_pred HHHHHHhCCEEEeCchhhCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHHH
Confidence 345567788765544433 235689999864 478888888888776543
No 480
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=96.60 E-value=0.021 Score=65.34 Aligned_cols=134 Identities=16% Similarity=0.120 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
...+.++.+.|.+++... ....|+.+|||||..|+++||.... + +.++.+....
T Consensus 87 ~~~~~~la~~l~~~~p~~----------~~v~f~~sGseA~e~AlklAr~~tg-r---------------~~i~~~~~~~ 140 (431)
T PRK06209 87 SAIELDAAESFLELIDGA----------DMVKFCKNGSDATSAAVRLARAYTG-R---------------DLVARCADHP 140 (431)
T ss_pred CHHHHHHHHHHHHhCCcc----------ceEEEecCHHHHHHHHHHHHHHHhC-C---------------CeEEEeccCc
Confidence 345556777888876321 1367999999999999999997621 1 1111110111
Q ss_pred chhHHHH---HH--hCCCc--eE--EEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 641 NSSVEKS---AI--IGDVP--VR--QLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 641 H~Sv~kA---a~--~lGl~--v~--~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
..+.... .. ..|.. +. .+.... =|+++|++.+++. +..+.+|+.-......+..+.+++|.++|+
T Consensus 141 ~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~d~~~l~~~l~~~---~~~~aavi~Epv~g~~~~~~~l~~l~~lc~ 214 (431)
T PRK06209 141 FFSTDDWFIGTTPMSAGIPASVSALTVTFRY---NDIASLEALFEDH---PGRIACVILEPATADEPQDGFLHEVRRLCH 214 (431)
T ss_pred cccccccccccCCCCCCCChhHhccccccCC---CCHHHHHHHHHhC---CCCEEEEEEccccCCCCCHHHHHHHHHHHH
Confidence 1010000 00 01110 00 111111 1789999988642 122334443222222334455999999999
Q ss_pred hcCCEEEEecccccc
Q psy13453 712 EYNIWLHVDAAYAGS 726 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~ 726 (764)
+||+.|++|-++.|.
T Consensus 215 ~~g~lLI~DEv~tG~ 229 (431)
T PRK06209 215 ENGALFILDEMITGF 229 (431)
T ss_pred HcCCEEEEEcccccC
Confidence 999999999998664
No 481
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=96.59 E-value=0.091 Score=58.61 Aligned_cols=218 Identities=11% Similarity=0.044 Sum_probs=119.2
Q ss_pred eHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-------CCCce
Q psy13453 23 ESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-------NGPLK 95 (764)
Q Consensus 23 Sv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-------~~wlH 95 (764)
++...+..+|... +.||.+++ .+|++++++++.+. ++-+++-+-+..++|.+=|.+++.+ +.|+-
T Consensus 120 ~~~~~~~~~g~~~---~~vp~~~~-~~~~~~l~~~~~~~----~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI 191 (369)
T PRK08153 120 TFNYHVAGFGGRL---VTVPYRDD-REDLDALLDAARRE----NAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLV 191 (369)
T ss_pred HHHHHHHHcCCeE---EEeeCCCC-CCCHHHHHHHhccc----CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEE
Confidence 3555788888766 88998766 58999988776532 1225544679999999988777543 56776
Q ss_pred eccccccc-c-ceee-eecC-CCc-cccccccccc---------cCCc-------ccCCCCcccHHHHHHHHHHccHHH-
Q psy13453 96 VGGVLRRV-Y-SSCL-VPRG-QKS-LRTTVLFHFL---------FQHW-------QIPLGRRFRALKLWMTLRSYGLKG- 153 (764)
Q Consensus 96 VDa~l~~~-y-~s~l-l~rd-~~~-l~~~~s~~~d---------~~d~-------tle~SRr~~ALklWatL~~lG~eG- 153 (764)
+|-..... + +++. +... +.. .-.+||=.+. .+.. .+...-....+..+++...+..+.
T Consensus 192 ~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~~~~~s~~~q~~~~~~l~~~~~ 271 (369)
T PRK08153 192 LDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRNHFGMNRIAQAAALAALKDQAY 271 (369)
T ss_pred EeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhcCCCCCHHHHHHHHHHhcCHHH
Confidence 66643111 1 1110 0000 000 0001110000 0000 000001234455566555554334
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEe
Q psy13453 154 LQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVK 233 (764)
Q Consensus 154 y~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~ 233 (764)
+++..+..-+..+++.+.+++. ++... ++..+.+-++.. ....+-.++.++|.+.|..+-..
T Consensus 272 ~~~~~~~~~~~r~~~~~~L~~~-g~~~~-p~~~~f~~~~~~----------------~~~~~a~~l~~~l~~~Gi~v~~p 333 (369)
T PRK08153 272 LAEVVGKIAAARDRIAAIARAN-GLTPL-PSATNFVAIDCG----------------RDGAFARAVLDGLIARDIFVRMP 333 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCccC-CCcCcEEEEECC----------------CCcccHHHHHHHHHHCCeEEeeC
Confidence 3444455555666777778765 66533 344443333221 01123468889999999865322
Q ss_pred ceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 234 GSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 234 t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
..-.+..++|+++. ++++++.+++.+++..+.+
T Consensus 334 ~~~~~~~~iRis~~----~~~~~~~~~~al~~~~~~~ 366 (369)
T PRK08153 334 GVAPLDRCIRVSCG----PDEELDLFAEALPEALEAA 366 (369)
T ss_pred CCCCCCCeEEEecC----CHHHHHHHHHHHHHHHHHh
Confidence 22234568999877 5889999999998876543
No 482
>KOG0634|consensus
Probab=96.59 E-value=0.017 Score=64.25 Aligned_cols=147 Identities=13% Similarity=0.110 Sum_probs=103.1
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCce
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKL 632 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~ 632 (764)
.|..+...-++-..+.+.....++.|.. ..-+.++|+|.|.+...++..+.++ ..
T Consensus 95 QYg~s~G~peLl~fik~h~~~~ih~p~~------~~wdiiit~G~t~~l~~~l~~~~N~-------------------gd 149 (472)
T KOG0634|consen 95 QYGQSSGIPELLLFIKDHNRPTIHAPPY------KNWDIIITNGNTDGLFKVLRTLINR-------------------GD 149 (472)
T ss_pred ccccccCcHHHHHHHHHhccccccCCCC------CCceEEEecCCchHHHHHHHHhhcC-------------------CC
Confidence 3444555555555555544444555442 2246789999999998888877654 12
Q ss_pred EEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhc--C-CCc-eEEEEeeccCCccccccH---HH
Q psy13453 633 VAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAK--G-LIP-CCLIATLGTTGTCAFDNL---EE 705 (764)
Q Consensus 633 vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~--G-~~p-~~VvataGTT~~GaiDpl---~e 705 (764)
.|++-+.+-.+-..+.+.+|+.++.|+.|++| |+++.|++.+..-.-. | ..| ++-.+-.|.+.||.-=.+ ++
T Consensus 150 ~vlie~~ty~~AL~s~~a~gv~~ipv~md~~G-i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~ 228 (472)
T KOG0634|consen 150 HVLIEEYTYPSALQSMEALGVKIIPVKMDQDG-IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKK 228 (472)
T ss_pred ceEEecccchHHHHhccccCceEEeccccCCC-CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHH
Confidence 57888888888888888999888888887776 9999999999754322 2 224 222334477888877554 56
Q ss_pred HHHHHHhcCCEEEEeccccc
Q psy13453 706 LGPICQEYNIWLHVDAAYAG 725 (764)
Q Consensus 706 Ia~i~~~~glwLHVDaA~Gg 725 (764)
|.++|++|++.+.-|--|.-
T Consensus 229 iy~LArKyDfLIVeDdpYy~ 248 (472)
T KOG0634|consen 229 IYQLARKYDFLIVEDDPYYF 248 (472)
T ss_pred HHHHHHHcCEEEEecCccce
Confidence 99999999999999998765
No 483
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=96.56 E-value=0.0017 Score=71.45 Aligned_cols=109 Identities=17% Similarity=0.127 Sum_probs=35.0
Q ss_pred HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCC-----ccccccHHHHHHHHHhcCCEEE
Q psy13453 644 VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTG-----TCAFDNLEELGPICQEYNIWLH 718 (764)
Q Consensus 644 v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~-----~GaiDpl~eIa~i~~~~glwLH 718 (764)
+....+..|.+++.|-+ ..+-.+++.+++|.++++ ++.-..-|+. ++.+ +++++++++++||++++
T Consensus 104 ip~vm~~sGa~lvEVGt--tN~t~~~Dye~AI~e~Ta------~ll~Vh~Sn~~i~GFt~~~-~~~el~~la~~~~lp~i 174 (367)
T PF03841_consen 104 IPDVMRQSGARLVEVGT--TNRTHLSDYEKAITENTA------ALLKVHTSNFRIQGFTGEV-SLEELAELAKEHGLPVI 174 (367)
T ss_dssp ------------------------------------------------------------------HHHHHHHHHT--EE
T ss_pred ccccccccccccccccc--cccccccccccccccccc------ccccccccccccccccccc-cHHHHHHHHhhcCCcEE
Confidence 33444456667766654 457778999999998865 4443333332 2333 79999999999999999
Q ss_pred Eeccccccccccchh-----hhhhcCC-CcccEEEEcCCccCCCCcCceee
Q psy13453 719 VDAAYAGSALLLPEY-----AHLKRGL-EYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 719 VDaA~Gg~~l~~~~~-----r~~l~gi-e~aDSit~d~HK~l~~P~~~g~l 763 (764)
+|.+-|...=+ ..+ ....+-+ ..||-+++|+.|.++.|. +|++
T Consensus 175 ~DlgsG~l~dl-~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI 223 (367)
T PF03841_consen 175 VDLGSGLLVDL-SPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGII 223 (367)
T ss_dssp EE-TTHHHHHH-HTT----------CCCCT-SEEEEETTSSSSS-S--EEE
T ss_pred EECCCCCCcCc-ccccCccccHHHHHhhcCCCEEEEECCCcCCCCC-eEEE
Confidence 99986653211 111 1111122 247999999999999998 6876
No 484
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=96.54 E-value=0.11 Score=60.13 Aligned_cols=177 Identities=15% Similarity=0.055 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEe-CChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQ-STASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfT-sGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
..+.++.+.|.+++. ..+. .....+|+ .+|||||-.|++.||... .+ +-+|.....-
T Consensus 106 ~~~~~la~~L~~~~p--~~~~----~~~~v~f~~~SGSEAve~AlklAr~~t-gr---------------~~ii~~~~~y 163 (464)
T PRK06938 106 PVKDQFVQDLFASLP--EAFA----REAKIQFCGPTGTDAVEAALKLVKTAT-GR---------------STVLSFQGGY 163 (464)
T ss_pred HHHHHHHHHHHHhCc--cccc----ccceEEEeCCCcHHHHHHHHHHHHHhh-CC---------------CeEEEECCcc
Confidence 444455566666653 1110 00123465 699999999999999652 11 1234444445
Q ss_pred chhHHHHHHhCC----------C--ceEEEecCCCCc------------ccHHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 641 NSSVEKSAIIGD----------V--PVRQLRSDDNGV------------LRGDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 641 H~Sv~kAa~~lG----------l--~v~~Vp~d~~g~------------md~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
|=...-+..+.| + ++..+|...+.+ -+.+.+++.+++.......+.+|++---...
T Consensus 164 HG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~ 243 (464)
T PRK06938 164 HGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGE 243 (464)
T ss_pred CCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCC
Confidence 533333333211 1 345565432211 2467788888643211123445554433333
Q ss_pred cccc----ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 697 TCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 697 ~Gai----Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
.|.+ +=++++.++|++||+.|++|-.+.|+-....-+....-|+ ..|-+++ -|.++.-+..|++
T Consensus 244 gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~~--gKglggG~PlsAv 311 (464)
T PRK06938 244 GGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGI-IPDVVVL--SKAIGGSLPLAVV 311 (464)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCC-CCCEEEe--eccccCCCceEEE
Confidence 3544 3488999999999999999999877533222222222355 4787777 4655543445543
No 485
>PRK07483 hypothetical protein; Provisional
Probab=96.50 E-value=0.15 Score=58.50 Aligned_cols=170 Identities=15% Similarity=0.090 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+.|++++..+- ....|+.+|||||-.|++.||.....+ +..+ ++-+|.....-|
T Consensus 73 ~~~~~lae~L~~~~p~~~---------~~v~f~~sGsEAve~AlklAr~~~~~~-g~~~---------r~~Ii~~~~~YH 133 (443)
T PRK07483 73 EPAEALADRLVAAAPAGL---------EHVYFVSGGSEAVEAALKLARQYFVEI-GQPQ---------RRHFIARRQSYH 133 (443)
T ss_pred HHHHHHHHHHHHhCCCCC---------CEEEEcCCcHHHHHHHHHHHHHHHHhc-CCCC---------CcEEEEECCCcC
Confidence 344556677777763111 246799999999999999999764321 1100 111333344445
Q ss_pred hhHHHHHHhCC------------CceEEEecCCCCcc-------------cHHHHHHHHHHhhhcCCCceEEEEeeccC-
Q psy13453 642 SSVEKSAIIGD------------VPVRQLRSDDNGVL-------------RGDALLTAVKEDLAKGLIPCCLIATLGTT- 695 (764)
Q Consensus 642 ~Sv~kAa~~lG------------l~v~~Vp~d~~g~m-------------d~~~Le~~I~~~~~~G~~p~~VvataGTT- 695 (764)
=...-+..+.| ..+..+|.....+- .+++|++.+.+. ....+.+|++---.-
T Consensus 134 G~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvivEPiqg~ 211 (443)
T PRK07483 134 GNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILEL--GPDTVAAFVAETVVGA 211 (443)
T ss_pred CcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCceEEEEEeCcccC
Confidence 33222222211 12344443211111 135666656431 112233333322111
Q ss_pred Ccccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCC
Q psy13453 696 GTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLL 755 (764)
Q Consensus 696 ~~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~ 755 (764)
.-|.+-+ +++|+++|++||+.|++|-.+.|+-....-+.+..-|+ ..|-+++ -|.++
T Consensus 212 ~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~ 272 (443)
T PRK07483 212 TAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGV-APDLVTI--AKGLG 272 (443)
T ss_pred cCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCC-CCCeeee--hhhhc
Confidence 1244443 89999999999999999999887533222122222345 3676666 45554
No 486
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=96.50 E-value=0.069 Score=60.08 Aligned_cols=224 Identities=14% Similarity=0.043 Sum_probs=137.1
Q ss_pred ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCc-ccccccCchhhh
Q psy13453 11 AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRT-LHQDIQSLNAPV 89 (764)
Q Consensus 11 ~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT-~~G~iDpi~~ia 89 (764)
+.-|+- |.|.|+..++++.+-.. +.-+ .-|+++||+.|++++..+..+.+|.|=|-+ +.|.+=||.++.
T Consensus 125 li~~D~--lnHASiidG~rls~a~~---~~f~-----HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~ 194 (388)
T COG0156 125 LIFSDE--LNHASIIDGIRLSRAEV---RRFK-----HNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELV 194 (388)
T ss_pred EEEEec--hhhhhHHHHHHhCCCcE---EEec-----CCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHH
Confidence 334444 38999999999877655 4433 368999999999976554345666666654 679999999988
Q ss_pred c-----CCCceeccccccc-cc----e---e--eeecCCCcccccccccc-----------ccCCcccCCCC--------
Q psy13453 90 S-----NGPLKVGGVLRRV-YS----S---C--LVPRGQKSLRTTVLFHF-----------LFQHWQIPLGR-------- 135 (764)
Q Consensus 90 ~-----~~wlHVDa~l~~~-y~----s---~--ll~rd~~~l~~~~s~~~-----------d~~d~tle~SR-------- 135 (764)
+ +.|+=||=.+... ++ + . +..++...+..+|+-.+ .+.||-.+-+|
T Consensus 195 ~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~Gg~v~g~~~~~d~L~~~ar~~ifStal 274 (388)
T COG0156 195 ELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSGGYIAGSAALIDYLRNRARPFIFSTAL 274 (388)
T ss_pred HHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccCceeeCcHHHHHHHHHhCCceeccCCC
Confidence 7 8888777754222 11 0 1 11122223333332100 11122222222
Q ss_pred -cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccH
Q psy13453 136 -RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDND 214 (764)
Q Consensus 136 -r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~ 214 (764)
+..+...-++++.+= -..++.++.-+++++|...++. -++.+ .+....|+.+-. +.+.
T Consensus 275 pP~~aaa~~~al~~l~--~~~~~r~~L~~~~~~~~~~~~~-~~~~~-~~s~s~I~pv~~-----------------gd~~ 333 (388)
T COG0156 275 PPAVAAAALAALRILE--EGPERRERLQELAAFFRSLLKA-LGLVL-LPSESPIIPVIL-----------------GDEE 333 (388)
T ss_pred CHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHh-cCCcc-CCCCCCeeeeEe-----------------CCHH
Confidence 333334445555542 4556677777888888866664 35554 455566776643 2334
Q ss_pred HHHHHHHHHHhcCcEEE--E-eceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 215 LNKAVYDRIIARKVIYI--V-KGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 215 ~n~~L~~~L~~~G~~~v--s-~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
...++.+.|.++|.... . .|.-.|..-||+|++--| ++++|+.+++.+.++
T Consensus 334 ~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~h-t~~~I~~l~~~l~~~ 387 (388)
T COG0156 334 RALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAH-TEEDIDRLAEALSEV 387 (388)
T ss_pred HHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCC-CHHHHHHHHHHHHhh
Confidence 56788899999987432 2 333367788999887777 688999999988764
No 487
>PRK09265 aminotransferase AlaT; Validated
Probab=96.50 E-value=0.096 Score=59.06 Aligned_cols=226 Identities=10% Similarity=-0.011 Sum_probs=122.4
Q ss_pred eeeHHHHHhhcCCCCCCeEEecCCC--CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc-----
Q psy13453 21 IYESFKATHSLSGTPDQVRLSGLPD--SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS----- 90 (764)
Q Consensus 21 ~YSv~KAa~~LGl~~~~v~~Vpvd~--~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~----- 90 (764)
+..+..++..+|... +.+|+|. ++.+|+++|++++++. +-+++-+-++-++|.+=+ ++++++
T Consensus 129 y~~~~~~~~~~g~~~---v~~~~~~~~~~~~d~~~l~~~~~~~-----~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~ 200 (404)
T PRK09265 129 YPLWTAAVSLSGGKP---VHYLCDEEAGWFPDLDDIRSKITPR-----TKAIVIINPNNPTGAVYSKELLEEIVEIARQH 200 (404)
T ss_pred CcChHHHHHHcCCEE---EEEecccccCCCCCHHHHHHhcccc-----ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHC
Confidence 345677788888766 7788863 5789999999988642 224544567889998766 666654
Q ss_pred CCCceecccccc------ccceee-eecCCCcc-ccccc---------ccccc--CCc-----------ccCCC-CcccH
Q psy13453 91 NGPLKVGGVLRR------VYSSCL-VPRGQKSL-RTTVL---------FHFLF--QHW-----------QIPLG-RRFRA 139 (764)
Q Consensus 91 ~~wlHVDa~l~~------~y~s~l-l~rd~~~l-~~~~s---------~~~d~--~d~-----------tle~S-Rr~~A 139 (764)
++++-+|..... .+.++. +..+...+ -.+|+ ..+-. .+. .+... -....
T Consensus 201 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (404)
T PRK09265 201 NLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDMLASMRLCANV 280 (404)
T ss_pred CCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHHhccccCCCc
Confidence 778888874311 111100 00000000 00011 00000 000 00000 02223
Q ss_pred HHHHHHHHHccH-HHHHHHH---HHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHH
Q psy13453 140 LKLWMTLRSYGL-KGLQAYL---RKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDL 215 (764)
Q Consensus 140 LklWatL~~lG~-eGy~~~i---~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~ 215 (764)
+..+++...++. +.+.+.+ ++..+..+++.+.+++.+++++ .+|+-+..+|-..|..... ..+ -
T Consensus 281 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~-~~p~~g~~l~~~~~~~~~~----------~~~-~ 348 (404)
T PRK09265 281 PAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSC-VKPKGALYAFPKLDPKVYP----------IHD-D 348 (404)
T ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-cCCCcceEEEEEecccccC----------CCC-H
Confidence 344444444432 2233333 3556667778888888878764 5566565555222211000 001 1
Q ss_pred HHHHHHHHHhcCcEEEEecee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 216 NKAVYDRIIARKVIYIVKGSF--QDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 216 n~~L~~~L~~~G~~~vs~t~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
...+.+.+.+.|..+.-.... .+..++|+++. ++.+.+++.++.|.++.+.
T Consensus 349 ~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~---~~~e~l~~~l~rl~~~l~~ 401 (404)
T PRK09265 349 EQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTL---PRVDDLEEAIGRIGRFLSG 401 (404)
T ss_pred HHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeC---CCHHHHHHHHHHHHHHHHH
Confidence 235677788888866544433 23568999985 5688999999888876543
No 488
>PRK07505 hypothetical protein; Provisional
Probab=96.48 E-value=0.11 Score=58.59 Aligned_cols=215 Identities=9% Similarity=-0.041 Sum_probs=113.7
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
.|.|+.....+..-+ ..++.+|.+ |+++|++++++. +.++|-+-|..++|.+-|++++.+ ++++
T Consensus 144 ~H~s~~~~~~~~~~~-~~v~~~~~~-----d~~~l~~~~~~~-----~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~l 212 (402)
T PRK07505 144 AHASLNILKGICADE-TEVETIDHN-----DLDALEDICKTN-----KTVAYVADGVYSMGGIAPVKELLRLQEKYGLFL 212 (402)
T ss_pred hhHhHHhhhhhhhcC-CeEEEeCCC-----CHHHHHHHHhcC-----CCEEEEEecccccCCcCCHHHHHHHHHHcCCEE
Confidence 677764322222211 256777763 899999988642 235566778889999998888775 8889
Q ss_pred eecccccc----ccce-e----ee--ecCCC----cccccccc--------ccc--------cCCcccCCCCc-ccHHHH
Q psy13453 95 KVGGVLRR----VYSS-C----LV--PRGQK----SLRTTVLF--------HFL--------FQHWQIPLGRR-FRALKL 142 (764)
Q Consensus 95 HVDa~l~~----~y~s-~----ll--~rd~~----~l~~~~s~--------~~d--------~~d~tle~SRr-~~ALkl 142 (764)
.+|.+... ..+. + +- ..+.- ++..+|.. ..+ ...++..++.. .....+
T Consensus 213 i~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~Gg~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~ 292 (402)
T PRK07505 213 YIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASGGVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAI 292 (402)
T ss_pred EEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccCeEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHH
Confidence 99997411 1111 0 00 01100 01111110 000 11223333432 233344
Q ss_pred HHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHH
Q psy13453 143 WMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDR 222 (764)
Q Consensus 143 WatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~ 222 (764)
.+++..+.++.+.++.+...+..+.+.+.+... ...+-+.++.+.. .......++.++
T Consensus 293 ~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~g~~~~i~~~~~-----------------~~~~~~~~~~~~ 350 (402)
T PRK07505 293 LASAEIHLSEELDQLQQKLQNNIALFDSLIPTE-----QSGSFLPIRLIYI-----------------GDEDTAIKAAKQ 350 (402)
T ss_pred HHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-----CCCCCCCEEEEEe-----------------CCHHHHHHHHHH
Confidence 566666666666666555545444444333221 1112222222211 001123678899
Q ss_pred HHhcCcEEEEec--ee-CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 223 IIARKVIYIVKG--SF-QDRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 223 L~~~G~~~vs~t--~l-~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
|.++|....... .+ .+..+||+++. ...++++++.+++.|+++..
T Consensus 351 l~~~Gi~v~~~~~p~~~~~~~~lRi~~~-~~~t~eei~~~~~~l~~~l~ 398 (402)
T PRK07505 351 LLDRGFYTSPVFFPVVAKGRAGLRIMFR-ASHTNDEIKRLCSLLKEILD 398 (402)
T ss_pred HHHCCCeEeeecCCCCCCCCceEEEecC-ccCCHHHHHHHHHHHHHHHH
Confidence 999998654331 11 23468999644 44578899999999988753
No 489
>KOG3843|consensus
Probab=96.44 E-value=0.007 Score=63.20 Aligned_cols=121 Identities=22% Similarity=0.187 Sum_probs=87.0
Q ss_pred EEecCCcchhHHHHHHhCCCceEEEec--C-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCc---cccccHHHHH
Q psy13453 634 AYTSDQSNSSVEKSAIIGDVPVRQLRS--D-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGT---CAFDNLEELG 707 (764)
Q Consensus 634 i~~S~~aH~Sv~kAa~~lGl~v~~Vp~--d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~---GaiDpl~eIa 707 (764)
|+--..-..|..|+.-..|+..+.|.. | +.-+-|++++++.|++... =++.+..-||.. -.-|++++|+
T Consensus 106 iiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~iee~g~-----dcilci~sttscfapr~pd~leaia 180 (432)
T KOG3843|consen 106 IIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAIIEELGE-----DCILCIHSTTSCFAPRSPDNLEAIA 180 (432)
T ss_pred EEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHHHHhCC-----ceEEEEeecccccCCCCCchHHHHH
Confidence 445566778888888889997555553 2 3456799999999987532 244444445543 4569999999
Q ss_pred HHHHhcCCEEEEeccccccccccchhhhhh---cCCCcccEEEEcCCccCCCCcCcee
Q psy13453 708 PICQEYNIWLHVDAAYAGSALLLPEYAHLK---RGLEYVDSFDFNTHKWLLVNFDCSA 762 (764)
Q Consensus 708 ~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l---~gie~aDSit~d~HK~l~~P~~~g~ 762 (764)
.||..|+++-.|.-|||.- +.+.-+++ ....|.|.+.-+..|.+.+|.|-.+
T Consensus 181 aica~~diphivnnayglq---see~i~~iaa~~~~grida~vqsldknf~vpvggai 235 (432)
T KOG3843|consen 181 AICAAHDIPHIVNNAYGLQ---SEECIHKIAAAAECGRIDAFVQSLDKNFMVPVGGAI 235 (432)
T ss_pred HHHHccCchhhhccccccc---hHHHHHHHHHHhhhccHHHHHHHhhhcceeecchhH
Confidence 9999999999999999963 33322222 2345779999999999999988544
No 490
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=96.43 E-value=0.1 Score=60.48 Aligned_cols=174 Identities=16% Similarity=0.082 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+.|.+++.-... ..+-....|+.+|||||-.|+++||.....+ +.. .++-+|.....-|
T Consensus 107 ~~~~~lae~L~~~~p~~~~----~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~-g~~---------~r~~ii~~~~syH 172 (472)
T PRK08742 107 EPAVQLAEQLLAIAPRQDG----RAPLSKVFYADNGSAGVEVALKMAFHYFHNR-GEH---------RRTRFIALENGYH 172 (472)
T ss_pred HHHHHHHHHHHHhCCCccc----CCCCCEEEEeCCchHHHHHHHHHHHHHHHhc-CCC---------CCcEEEEECCCcC
Confidence 4455677778887632100 0000246899999999999999999875332 110 0122444555555
Q ss_pred hhHHHHHHhCCC------------ceEEEecCCCCc------------ccHHHHHHHHHHhhhcCCCceEEEEee-ccCC
Q psy13453 642 SSVEKSAIIGDV------------PVRQLRSDDNGV------------LRGDALLTAVKEDLAKGLIPCCLIATL-GTTG 696 (764)
Q Consensus 642 ~Sv~kAa~~lGl------------~v~~Vp~d~~g~------------md~~~Le~~I~~~~~~G~~p~~Vvata-GTT~ 696 (764)
=...-+..+.|. ++..+|.....+ -+++.+++.++. .+..+.+|+.-- -...
T Consensus 173 G~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~iAAvI~EPviqg~ 249 (472)
T PRK08742 173 GETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQ---SPGEICALILEPRLQCA 249 (472)
T ss_pred CCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEccccccC
Confidence 333333332221 234444321111 135677777752 122344554432 1222
Q ss_pred cccc----ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCC
Q psy13453 697 TCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLL 755 (764)
Q Consensus 697 ~Gai----Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~ 755 (764)
.|.+ +=+++++++|++||+.|++|-.+.|+-....-+....-|+ ..|-+++ -|.++
T Consensus 250 gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv-~PDiv~~--gKgl~ 309 (472)
T PRK08742 250 GGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV-MPDLLCL--SKGLT 309 (472)
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCC-CCCEEEE--ccccc
Confidence 3433 4588899999999999999999777533222222222355 4777777 56554
No 491
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=96.43 E-value=0.1 Score=59.71 Aligned_cols=152 Identities=14% Similarity=0.065 Sum_probs=79.9
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCc-eE----------EE
Q psy13453 590 GGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVP-VR----------QL 658 (764)
Q Consensus 590 ~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~-v~----------~V 658 (764)
...|+.+|||||-.|++.||....+.....|. +...++-++.....-|=...-+..+.|.. .+ .+
T Consensus 105 ~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~----~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~ 180 (431)
T TIGR03251 105 HLFFIEGGALAVENALKTAFDWKSRHNQARGI----PAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRI 180 (431)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhcchhhcCC----CCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccC
Confidence 35799999999999999999753211000000 00001224445555554433333332210 00 01
Q ss_pred e-------cCCCC--------cccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc----ccHHHHHHHHHhcCCEEEE
Q psy13453 659 R-------SDDNG--------VLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF----DNLEELGPICQEYNIWLHV 719 (764)
Q Consensus 659 p-------~d~~g--------~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai----Dpl~eIa~i~~~~glwLHV 719 (764)
+ .+.+. .-+++++++.+.. .+..+.+|++.--....|.+ +-+++|.++|++||+.|.+
T Consensus 181 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~ 257 (431)
T TIGR03251 181 DNPKLTFPLDAPNLDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIF 257 (431)
T ss_pred CCCcccCCccccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 1 11110 0123445555542 23356677666544444554 6899999999999999999
Q ss_pred eccccccccccchhhhhhcCCCcccEEEEc
Q psy13453 720 DAAYAGSALLLPEYAHLKRGLEYVDSFDFN 749 (764)
Q Consensus 720 DaA~Gg~~l~~~~~r~~l~gie~aDSit~d 749 (764)
|-.+.|+-..-.-+....-|+ ..|-+++.
T Consensus 258 DEV~tG~GrtG~~~a~~~~gv-~PDi~~~g 286 (431)
T TIGR03251 258 DEVQTGVGLTGTAWAYQQLGV-QPDIVAFG 286 (431)
T ss_pred ecchhccCccchHHHHHhcCC-CCCEEEec
Confidence 999887422111111112344 46766653
No 492
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=96.42 E-value=0.06 Score=60.70 Aligned_cols=133 Identities=20% Similarity=0.099 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 560 CTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 560 ~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
-+++|.++.+.+.++++.-+ -.-|+++||||++.|+++||..-.+ +.+|-....
T Consensus 91 Pte~Ei~~Aell~~~~p~~e----------~vrfvnSGTEAtmsAiRlARa~TgR----------------~kIikF~G~ 144 (432)
T COG0001 91 PTELEVELAELLIERVPSIE----------KVRFVNSGTEATMSAIRLARAYTGR----------------DKIIKFEGC 144 (432)
T ss_pred CCHHHHHHHHHHHHhcCccc----------EEEEecchhHHHHHHHHHHHHhhCC----------------CeEEEEcCC
Confidence 46788889999999987632 2469999999999999999976321 123444444
Q ss_pred cchhHHHHHHh-------------CCC------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc
Q psy13453 640 SNSSVEKSAII-------------GDV------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF 700 (764)
Q Consensus 640 aH~Sv~kAa~~-------------lGl------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai 700 (764)
-|-+.+-...- .|+ .++.+|-+ |+++|++++++. |....+|+.=---.+.|.|
T Consensus 145 YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-----D~~al~~~~~~~---g~~IAaVIvEPv~gn~g~i 216 (432)
T COG0001 145 YHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN-----DLEALEEAFEEY---GDDIAAVIVEPVAGNMGVV 216 (432)
T ss_pred CCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC-----CHHHHHHHHHHc---CCcEEEEEeccccCCCCCC
Confidence 44333222211 122 24455544 589999998764 3345677766666667887
Q ss_pred cc----HHHHHHHHHhcCCEEEEecccccc
Q psy13453 701 DN----LEELGPICQEYNIWLHVDAAYAGS 726 (764)
Q Consensus 701 Dp----l~eIa~i~~~~glwLHVDaA~Gg~ 726 (764)
-| +++++++|++||.-|+.|-...|+
T Consensus 217 ~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGF 246 (432)
T COG0001 217 PPEPGFLEGLRELTEEHGALLIFDEVITGF 246 (432)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEecchhhc
Confidence 55 677999999999999999876654
No 493
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=96.42 E-value=0.16 Score=57.58 Aligned_cols=229 Identities=5% Similarity=-0.122 Sum_probs=122.0
Q ss_pred eeHHHHHhhcCCCCCCeEEecCC--CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchh---hhc-----C
Q psy13453 22 YESFKATHSLSGTPDQVRLSGLP--DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNA---PVS-----N 91 (764)
Q Consensus 22 YSv~KAa~~LGl~~~~v~~Vpvd--~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~---ia~-----~ 91 (764)
......++..|... +.+|++ +++++|+++|++++++. +.+++-+-++-++|.+=+.++ +.+ +
T Consensus 132 ~~~~~~~~~~g~~~---~~~~~~~~~~~~~d~~~l~~~~~~~-----~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~ 203 (409)
T PLN00143 132 PDVETYAIFHHLEI---RHFDLLPEKGWEVDLDAVEAIADEN-----TIAMVIINPGNPCGSVYSYEHLNKIAETARKLG 203 (409)
T ss_pred cCHHHHHHHcCCEE---EEEeccCCCCCcCCHHHHHHhcccC-----CEEEEEECCCCCCCCccCHHHHHHHHHHHHHcC
Confidence 35667788899877 888885 45689999999987542 335554557889999977554 332 7
Q ss_pred CCceeccccccc-c-----ceeeeecCC-Cc-cccccccccc---------cC-Cc---------------ccCCCCccc
Q psy13453 92 GPLKVGGVLRRV-Y-----SSCLVPRGQ-KS-LRTTVLFHFL---------FQ-HW---------------QIPLGRRFR 138 (764)
Q Consensus 92 ~wlHVDa~l~~~-y-----~s~ll~rd~-~~-l~~~~s~~~d---------~~-d~---------------tle~SRr~~ 138 (764)
+|+.+|-+.... | .+...+... .. .-.+||=.+. .. +. ....+--..
T Consensus 204 ~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 283 (409)
T PLN00143 204 ILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKALNPAPFPP 283 (409)
T ss_pred CeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHHHHhccCCCC
Confidence 888888753211 1 110000000 00 0001110000 00 00 000000012
Q ss_pred HHHHHHHHHHc--c-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHH
Q psy13453 139 ALKLWMTLRSY--G-LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDL 215 (764)
Q Consensus 139 ALklWatL~~l--G-~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~ 215 (764)
.+...+....+ + .+-|.+.+++.-+..+++.+.+++.+.+.....|+-+...|--.|.... .....
T Consensus 284 ~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~~----------~~~~~- 352 (409)
T PLN00143 284 TFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLL----------EDIED- 352 (409)
T ss_pred chHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecchhhc----------CCCCC-
Confidence 23333333333 2 3445666666666677788888877654434566655544422211000 00000
Q ss_pred HHHHH-HHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 216 NKAVY-DRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 216 n~~L~-~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
..++. +.+.+.|..+.-........++|++++. ..+.+++.++.|.++.+...+
T Consensus 353 ~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~---~~~~l~~al~rl~~~l~~~~~ 407 (409)
T PLN00143 353 DMEFCLKLAKEESLIILPGVTVGLKNWLRITFAV---EQSSLEDGLGRLKSFCGRHAK 407 (409)
T ss_pred HHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcC---CHHHHHHHHHHHHHHHHHhcc
Confidence 23343 4556778766655545556799999984 378888888888887665443
No 494
>PRK12414 putative aminotransferase; Provisional
Probab=96.40 E-value=0.056 Score=60.59 Aligned_cols=218 Identities=11% Similarity=0.036 Sum_probs=118.8
Q ss_pred eeeHHHHHhhcCCCCCCeEEecCC-CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc---cCchhhhc-----C
Q psy13453 21 IYESFKATHSLSGTPDQVRLSGLP-DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI---QSLNAPVS-----N 91 (764)
Q Consensus 21 ~YSv~KAa~~LGl~~~~v~~Vpvd-~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i---Dpi~~ia~-----~ 91 (764)
+.+...+++..|... +.||++ +++.+|+++|++++++. +-+++-+-++.++|.+ ++++++++ +
T Consensus 124 y~~~~~~~~~~g~~~---~~v~~~~~~~~~d~~~l~~~l~~~-----~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~ 195 (384)
T PRK12414 124 FDSYAPIVRLQGATP---VAIKLSPEDFRVNWDEVAAAITPR-----TRMIIVNTPHNPSATVFSAADLARLAQLTRNTD 195 (384)
T ss_pred ccchHHHHHHcCCEE---EEEecCccccccCHHHHHhhcCcc-----cEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCC
Confidence 345566778888766 889998 46789999999988642 2244445689999997 66766654 7
Q ss_pred CCceeccccccc-cc-----eeeeecC-C-C-ccccccccccc------------------cCCcccCCCCcccHHHHHH
Q psy13453 92 GPLKVGGVLRRV-YS-----SCLVPRG-Q-K-SLRTTVLFHFL------------------FQHWQIPLGRRFRALKLWM 144 (764)
Q Consensus 92 ~wlHVDa~l~~~-y~-----s~ll~rd-~-~-~l~~~~s~~~d------------------~~d~tle~SRr~~ALklWa 144 (764)
+|+-+|...... |. ++.-..+ . . ..-.+||-.+. +....-........+..++
T Consensus 196 ~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~~~~~~~~~s~~~q~a 275 (384)
T PRK12414 196 IVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMDEIRKVHQFMVFSADTPMQHA 275 (384)
T ss_pred eEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHHHHHHHHHHhheecCCCcHHHHH
Confidence 788888854211 11 1000000 0 0 00001110000 0000000112233344445
Q ss_pred HHHHccH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEE-EeeccccccccccccCccCCccHHHHHHHHH
Q psy13453 145 TLRSYGL-KGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCF-RLKVRFWDKLDNLFGTISFGDNDLNKAVYDR 222 (764)
Q Consensus 145 tL~~lG~-eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~F-ry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~ 222 (764)
....+-. +.+.+..+...+..+++.+.|+++ ++.+ .+|+-+...| ++.+. . ...+ ...+.+.
T Consensus 276 ~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~-~~~~gg~~~~~~~~~~-~-----------~~~~--~~~~~~~ 339 (384)
T PRK12414 276 FAEALAEPASYLGLGAFYQRKRDLLARELAGS-RFEL-LPSEGSFFMLARFRHF-S-----------DESD--SDFVLRL 339 (384)
T ss_pred HHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC-CCee-cCCCcceEEEEccccc-C-----------CCCH--HHHHHHH
Confidence 4444422 234445555566777788888886 6664 4566555555 43210 0 0001 1233455
Q ss_pred HHhcCcEEEEecee--CC--eeEEEEeccCCCCCHHHHHHHHHHHHH
Q psy13453 223 IIARKVIYIVKGSF--QD--RLFMRFAICSSQTEESDVQLGWNEIRT 265 (764)
Q Consensus 223 L~~~G~~~vs~t~l--~g--~~~LRi~v~np~Tt~e~i~~~l~~l~~ 265 (764)
|.+.|..+...... .+ ..++|++++. .++++++.++.|.+
T Consensus 340 l~~~gV~v~pg~~f~~~~~~~~~iRis~~~---~~~~~~~~~~rl~~ 383 (384)
T PRK12414 340 IRDARVATIPLSAFYTDGTDTGLIRLSFSK---DDATLVEGARRLCS 383 (384)
T ss_pred HHhCCEEEecchhhcCCCCCCCEEEEEecC---CHHHHHHHHHHHhh
Confidence 66788877655433 12 4689999985 37888888877754
No 495
>PRK08297 L-lysine aminotransferase; Provisional
Probab=96.39 E-value=0.13 Score=59.08 Aligned_cols=149 Identities=11% Similarity=0.043 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
...+..+.|+++.+ |..+ ....|+.+|||||-.|++.||.....+....+. . ...++-+|.....-|=
T Consensus 93 ~~~~la~~l~~~~~-p~~~-------~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~--~--~~~r~kii~~~~~yHG 160 (443)
T PRK08297 93 EMARFVDTFARVLG-DPEL-------PHLFFVDGGALAVENALKVAFDWKSRKNEARGI--D--PALGTKVLHLRGAFHG 160 (443)
T ss_pred HHHHHHHHHHhhcC-CCCC-------CEEEEeCchHHHHHHHHHHHHHHhhccccccCC--C--CCCCceEEEECCCcCC
Confidence 33445556666653 2211 246899999999999999999763211000000 0 0001223444444553
Q ss_pred hHHHHHHhCCC-----------ceEEEecCC-C----C-------c---ccHHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 643 SVEKSAIIGDV-----------PVRQLRSDD-N----G-------V---LRGDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 643 Sv~kAa~~lGl-----------~v~~Vp~d~-~----g-------~---md~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
.-.-+..+.|. ....+|... . + . =+++++++.|.+ .+..+.+|++---...
T Consensus 161 ~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~iAavI~EPi~g~ 237 (443)
T PRK08297 161 RSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFER---HPHDIACFIAEPIQGE 237 (443)
T ss_pred cchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEccccCC
Confidence 33333333221 000121100 0 0 0 134555666653 2334666665544444
Q ss_pred cccc----ccHHHHHHHHHhcCCEEEEecccccc
Q psy13453 697 TCAF----DNLEELGPICQEYNIWLHVDAAYAGS 726 (764)
Q Consensus 697 ~Gai----Dpl~eIa~i~~~~glwLHVDaA~Gg~ 726 (764)
.|.+ +-+++|.++|++||+.|.+|-.+.|+
T Consensus 238 ~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGf 271 (443)
T PRK08297 238 GGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGV 271 (443)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcc
Confidence 4555 78999999999999999999998774
No 496
>KOG2467|consensus
Probab=96.38 E-value=0.014 Score=63.75 Aligned_cols=174 Identities=18% Similarity=0.157 Sum_probs=110.9
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEE--eCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEE
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGII--QSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVA 634 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~Gvf--TsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi 634 (764)
.--..++|.-|.+.-.++||++++ .||+- .-+||-||+..-.+-.. +..+.-| +
T Consensus 81 ne~ID~iE~LCq~RALeaF~ldp~--------kWGVNVQp~SGSPANfavYtall~---Ph~RiMG-------------L 136 (477)
T KOG2467|consen 81 NEYIDQIELLCQKRALEAFGLDPE--------KWGVNVQPYSGSPANFAVYTALLK---PHERIMG-------------L 136 (477)
T ss_pred chHHHHHHHHHHHHHHHHhCCCHH--------HCceeeccCCCCchhhHHHhhhcC---CCCeeee-------------c
Confidence 345678999999999999999886 35543 35788898765443221 1111001 1
Q ss_pred EecCCcchhHHHH---HHhCCCc--eEEE--ecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHH
Q psy13453 635 YTSDQSNSSVEKS---AIIGDVP--VRQL--RSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEEL 706 (764)
Q Consensus 635 ~~S~~aH~Sv~kA---a~~lGl~--v~~V--p~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eI 706 (764)
-.++-.|-|---. -.+.... .... .+| +.|-||.|.||+.-..- +|-++| +|++.+.-.-|...+
T Consensus 137 DLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~f-----rPk~ii--aG~SaY~R~~DYaR~ 209 (477)
T KOG2467|consen 137 DLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLF-----RPKLII--AGTSAYSRLIDYARF 209 (477)
T ss_pred cCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhc-----CCcEEE--eccccchhhccHHHH
Confidence 1122222221000 0000000 1111 245 67999999999875443 465554 677777777789999
Q ss_pred HHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 707 GPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 707 a~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
++||++.|.+|.+|-|+-.+++...... .-+|.||-+|..-||.|-.|.+.=+||
T Consensus 210 R~Iad~~gA~Lm~DMAHISgLVAA~vip---sPFey~DiVTTTTHKsLRGPRg~mIFy 264 (477)
T KOG2467|consen 210 RKIADKVGAYLMADMAHISGLVAAGVIP---SPFEYCDIVTTTTHKSLRGPRGAMIFY 264 (477)
T ss_pred HHHHHhcCceeehhhhhHHHHHhcccCC---CcccccceeeccccccccCCcceeEEE
Confidence 9999999999999999876554332111 236889999999999999998865554
No 497
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=96.35 E-value=0.23 Score=57.35 Aligned_cols=176 Identities=16% Similarity=0.024 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcE-EEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGG-IIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~G-vfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
+..+.++.+.|.+++..... ...- +|+++|||||-.|++.||... .+ +.+|.....
T Consensus 100 ~~~~~~lAe~L~~~~p~~~~-------~~~~~f~~~SGsEAve~AlklAr~~t-gr---------------~~Ii~~~~~ 156 (459)
T PRK06931 100 TPLKDAFSEYLLSLLPGQGK-------EYCLQFTGPSGADAVEAAIKLAKTYT-GR---------------SNVISFSGG 156 (459)
T ss_pred CHHHHHHHHHHHHhCCCccc-------cceEEEeCCCcHHHHHHHHHHHHHhc-CC---------------CeEEEECCC
Confidence 45666777888888742210 0123 445899999999999999752 11 123444444
Q ss_pred cchhHHHHHHhCC------------CceEEEecCCCCc--------ccHHHHHHHHHHhhh----cCCCceEEEEeeccC
Q psy13453 640 SNSSVEKSAIIGD------------VPVRQLRSDDNGV--------LRGDALLTAVKEDLA----KGLIPCCLIATLGTT 695 (764)
Q Consensus 640 aH~Sv~kAa~~lG------------l~v~~Vp~d~~g~--------md~~~Le~~I~~~~~----~G~~p~~VvataGTT 695 (764)
-|=...-+..+.| -.+..+|.....+ -+.+++++.+++..+ .+..+.+|++---..
T Consensus 157 yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg 236 (459)
T PRK06931 157 YHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQG 236 (459)
T ss_pred cCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccC
Confidence 4533333332221 1345555432111 134555444443322 122344554432222
Q ss_pred Ccccc----ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCcee
Q psy13453 696 GTCAF----DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSA 762 (764)
Q Consensus 696 ~~Gai----Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~ 762 (764)
..|.+ +=++++.++|++||+.|++|-.+.|+-....-+....-|+ ..|-+++ -|.++.-+..|+
T Consensus 237 ~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv-~PDivt~--gK~l~gG~Pi~a 304 (459)
T PRK06931 237 EGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGI-EPDIIVM--SKAVGGGLPLAV 304 (459)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCC-CCCEEEe--cccccCCcceee
Confidence 33444 2389999999999999999999877533222222222355 4777776 455543344444
No 498
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=96.33 E-value=0.084 Score=59.01 Aligned_cols=222 Identities=11% Similarity=0.041 Sum_probs=121.0
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC-CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP-DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd-~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
.+.+..+++...|... +.++++ +++.+|+++|+++|++... .++-+++. +..+|..-|++++++ +++
T Consensus 78 ~~~~~~~~~~~~G~~~---~~~~~~~~~~~~d~~~l~~~i~~~~~-~~t~~v~~---~~~~G~~~~~~~i~~l~~~~~~~ 150 (380)
T TIGR03588 78 TFVATANCALYCGAKV---DFVDIDPDTGNIDEDALEKKLAAAKG-KLPKAIVP---VDFAGKSVDMQAIAALAKKHGLK 150 (380)
T ss_pred chHHHHHHHHHcCCEE---EEEecCCCcCCcCHHHHHHHhhcccC-CCceEEEE---eCCCCccCCHHHHHHHHHHcCCE
Confidence 3566778889999887 999997 4788999999999984311 11223332 234687778888765 788
Q ss_pred ceeccccccc------------cc------------------eeeeecCCCccccc--ccc---cccc--------CCcc
Q psy13453 94 LKVGGVLRRV------------YS------------------SCLVPRGQKSLRTT--VLF---HFLF--------QHWQ 130 (764)
Q Consensus 94 lHVDa~l~~~------------y~------------------s~ll~rd~~~l~~~--~s~---~~d~--------~d~t 130 (764)
+-+|++.... ++ ++++..+++..... +.. ..+. ..+.
T Consensus 151 lI~D~a~a~g~~~~~~~~g~~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 230 (380)
T TIGR03588 151 IIEDASHALGAEYGGKPVGNCRYADATVFSFHPVKIITTAEGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWY 230 (380)
T ss_pred EEEECCCcccCccCCEeCCCccccceEEEecCCCCcccccCceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcce
Confidence 8888854210 11 12222221110000 000 0000 0000
Q ss_pred cCCC-----CcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCc-----eeEEEEeecccccc
Q psy13453 131 IPLG-----RRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSM-----GLVCFRLKVRFWDK 200 (764)
Q Consensus 131 le~S-----Rr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l-----~iV~Fry~P~~~~~ 200 (764)
.+.. -+..-+..-..+. ..+.+.+++++..++++++.+.|..+|++++..++.- .+.++++.+.
T Consensus 231 ~~~~~~g~n~~m~~l~aa~g~~--qL~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---- 304 (380)
T TIGR03588 231 YEQQELGFNYRMTDIQAALGLS--QLKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQE---- 304 (380)
T ss_pred eeeeccccccCccHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCc----
Confidence 0100 0122222111111 1455889999999999999999999988876655321 1122222110
Q ss_pred ccccccCccCCccHHHHHHHHHHHhcCcEEE-EeceeC-------------C-------eeEEEEeccCCCCCHHHHHHH
Q psy13453 201 LDNLFGTISFGDNDLNKAVYDRIIARKVIYI-VKGSFQ-------------D-------RLFMRFAICSSQTEESDVQLG 259 (764)
Q Consensus 201 ~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~v-s~t~l~-------------g-------~~~LRi~v~np~Tt~e~i~~~ 259 (764)
... -..++.+.|.++|...- ....++ . ...|++ -+++..++++++.+
T Consensus 305 ---------~~~--~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~l-P~~~~l~~~dv~~i 372 (380)
T TIGR03588 305 ---------FGC--TRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISL-PLHPALTLEQQQRV 372 (380)
T ss_pred ---------CCC--CHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEc-CCCCCCCHHHHHHH
Confidence 001 12477788888776321 000110 0 134555 37888899999999
Q ss_pred HHHHHHH
Q psy13453 260 WNEIRTA 266 (764)
Q Consensus 260 l~~l~~~ 266 (764)
++.|+++
T Consensus 373 ~~~l~~~ 379 (380)
T TIGR03588 373 VETLRKV 379 (380)
T ss_pred HHHHHHh
Confidence 9998764
No 499
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=96.30 E-value=0.11 Score=59.88 Aligned_cols=77 Identities=10% Similarity=0.029 Sum_probs=53.7
Q ss_pred eeeeHHHH-HhhcCCCCCCeEEecCCC--------CCc--ccHHHHHHHHHHHhhCCCCcEEEEeeCCcccc-c---ccC
Q psy13453 20 LIYESFKA-THSLSGTPDQVRLSGLPD--------SEW--LAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQ-D---IQS 84 (764)
Q Consensus 20 ~~YSv~KA-a~~LGl~~~~v~~Vpvd~--------~~r--mD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G-~---iDp 84 (764)
.||...++ ..+.|... +.||+++ .++ +|+++|+++|.+... .++.+++.+.++-++| . .++
T Consensus 124 p~~~~~~~~i~~~G~~~---v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~-~~tk~Ivl~~p~NptGG~v~s~~~ 199 (460)
T PRK13238 124 YHFDTTRAHIELNGATA---VDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGA-ENVPFIVMTITNNSAGGQPVSMAN 199 (460)
T ss_pred CcccchHHHHHHcCCEE---EEEeccccccccccccccCCcCHHHHHHHHhhcCC-CceeEEEEecCCCCCCCcCCCHHH
Confidence 46766655 66778877 8888863 344 999999999985311 1345667777777776 3 455
Q ss_pred chhhhc-----CCCceecccc
Q psy13453 85 LNAPVS-----NGPLKVGGVL 100 (764)
Q Consensus 85 i~~ia~-----~~wlHVDa~l 100 (764)
++++++ ++|++.|++.
T Consensus 200 l~~I~~ia~~~gi~li~Daa~ 220 (460)
T PRK13238 200 LRAVYEIAKKYGIPVVIDAAR 220 (460)
T ss_pred HHHHHHHHHHcCCEEEEECcc
Confidence 666655 8999999854
No 500
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=96.30 E-value=0.0086 Score=64.65 Aligned_cols=74 Identities=9% Similarity=-0.134 Sum_probs=57.5
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC--C----CcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc---
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD--S----EWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS--- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~--~----~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~--- 90 (764)
.|+|+..++.+.|... +.++++. + +.+|++++++++++.. ..-+++-+.+ +++|.+.|++++++
T Consensus 108 ~h~s~~~~~~~~g~~~---~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~---~~k~v~l~~p-~~~G~~~dl~~I~~~~~ 180 (294)
T cd00615 108 CHKSVINGLVLSGAVP---VYLKPERNPYYGIAGGIPPETFKKALIEHP---DAKAAVITNP-TYYGICYNLRKIVEEAH 180 (294)
T ss_pred chHHHHHHHHHCCCEE---EEecCccCcccCcCCCCCHHHHHHHHHhCC---CceEEEEECC-CCCCEecCHHHHHHHHH
Confidence 7899999999998776 7787753 2 4799999999997632 1223445557 56999999999887
Q ss_pred --CCCceecccc
Q psy13453 91 --NGPLKVGGVL 100 (764)
Q Consensus 91 --~~wlHVDa~l 100 (764)
+++++||+++
T Consensus 181 ~~g~~livDeA~ 192 (294)
T cd00615 181 HRGLPVLVDEAH 192 (294)
T ss_pred hcCCeEEEECcc
Confidence 8899999965
Done!