Query psy13453
Match_columns 764
No_of_seqs 493 out of 4038
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 19:50:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13453.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13453hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e1o_A HDC, histidine decarbox 100.0 7.3E-56 2.5E-60 504.7 32.7 319 446-764 2-321 (481)
2 3k40_A Aromatic-L-amino-acid d 100.0 8.6E-56 2.9E-60 503.7 30.9 314 450-764 1-314 (475)
3 3vp6_A Glutamate decarboxylase 100.0 9.5E-50 3.3E-54 457.9 36.2 319 422-764 2-328 (511)
4 1js3_A DDC;, DOPA decarboxylas 100.0 2.7E-50 9.1E-55 458.1 31.3 315 450-764 1-315 (486)
5 2okj_A Glutamate decarboxylase 100.0 6E-48 2E-52 441.2 35.8 316 425-764 2-325 (504)
6 2jis_A Cysteine sulfinic acid 100.0 3.1E-47 1.1E-51 436.8 33.2 319 421-764 15-339 (515)
7 2qma_A Diaminobutyrate-pyruvat 100.0 1.7E-44 5.7E-49 412.0 33.1 304 448-764 27-337 (497)
8 2dgk_A GAD-beta, GADB, glutama 100.0 3.8E-33 1.3E-37 314.1 23.9 258 484-764 7-274 (452)
9 3k40_A Aromatic-L-amino-acid d 100.0 1.7E-32 5.8E-37 311.9 21.7 244 7-273 180-474 (475)
10 4e1o_A HDC, histidine decarbox 100.0 2.2E-32 7.7E-37 311.2 22.3 244 7-272 186-480 (481)
11 3vp6_A Glutamate decarboxylase 100.0 1.3E-31 4.3E-36 307.5 21.7 259 8-270 191-505 (511)
12 3hbx_A GAD 1, glutamate decarb 100.0 5.9E-31 2E-35 301.2 26.9 265 478-764 14-289 (502)
13 3bc8_A O-phosphoseryl-tRNA(SEC 100.0 9.9E-31 3.4E-35 293.4 15.6 235 493-764 21-278 (450)
14 1js3_A DDC;, DOPA decarboxylas 100.0 1.1E-29 3.6E-34 288.6 22.7 245 8-274 181-478 (486)
15 2okj_A Glutamate decarboxylase 100.0 4.7E-29 1.6E-33 284.9 22.6 257 10-270 191-502 (504)
16 2qma_A Diaminobutyrate-pyruvat 100.0 9.8E-29 3.3E-33 281.8 23.1 245 10-270 204-496 (497)
17 2jis_A Cysteine sulfinic acid 100.0 9.7E-29 3.3E-33 283.3 21.6 258 8-269 202-514 (515)
18 3mc6_A Sphingosine-1-phosphate 100.0 5.3E-28 1.8E-32 274.9 18.3 246 492-764 35-292 (497)
19 3mad_A Sphingosine-1-phosphate 99.9 2.1E-27 7.2E-32 271.7 20.1 247 493-764 69-324 (514)
20 2z67_A O-phosphoseryl-tRNA(SEC 99.9 7.5E-27 2.6E-31 263.7 18.1 266 447-764 26-310 (456)
21 3f9t_A TDC, L-tyrosine decarbo 99.9 3.9E-23 1.3E-27 224.7 27.0 246 494-764 4-258 (397)
22 2dgk_A GAD-beta, GADB, glutama 99.9 4.4E-23 1.5E-27 232.0 19.1 232 20-275 148-439 (452)
23 3mad_A Sphingosine-1-phosphate 99.9 7E-23 2.4E-27 234.2 14.0 257 11-307 195-499 (514)
24 3hbx_A GAD 1, glutamate decarb 99.9 1.2E-21 4.2E-26 224.0 20.5 238 10-276 156-450 (502)
25 1wyu_B Glycine dehydrogenase s 99.9 5.7E-21 1.9E-25 216.6 23.9 244 484-763 31-282 (474)
26 3mc6_A Sphingosine-1-phosphate 99.9 6.7E-22 2.3E-26 224.7 11.9 259 11-307 161-471 (497)
27 3hl2_A O-phosphoseryl-tRNA(SEC 99.8 2.4E-19 8.2E-24 199.5 19.6 239 493-763 39-295 (501)
28 3nnk_A Ureidoglycine-glyoxylat 99.7 2.8E-17 9.7E-22 180.2 16.9 203 519-764 8-212 (411)
29 3isl_A Purine catabolism prote 99.7 1.2E-16 4.1E-21 175.5 20.2 202 519-764 6-210 (416)
30 4hvk_A Probable cysteine desul 99.7 7.9E-17 2.7E-21 173.9 18.4 202 525-764 3-210 (382)
31 2yrr_A Aminotransferase, class 99.7 3.6E-17 1.2E-21 174.9 15.4 170 556-764 27-198 (353)
32 4eb5_A Probable cysteine desul 99.7 1.7E-16 5.8E-21 172.1 19.5 202 525-764 3-210 (382)
33 2dr1_A PH1308 protein, 386AA l 99.7 1.3E-16 4.5E-21 173.2 18.7 199 523-764 20-220 (386)
34 3lvm_A Cysteine desulfurase; s 99.7 1.5E-16 5.1E-21 175.6 17.3 204 523-764 23-236 (423)
35 2z9v_A Aspartate aminotransfer 99.7 2.4E-16 8.3E-21 171.9 18.5 200 521-764 7-208 (392)
36 3vax_A Putative uncharacterize 99.7 1.4E-16 4.8E-21 174.3 16.5 207 520-764 18-231 (400)
37 2bkw_A Alanine-glyoxylate amin 99.7 3.1E-16 1.1E-20 170.1 18.6 206 523-764 4-213 (385)
38 3bc8_A O-phosphoseryl-tRNA(SEC 99.7 6.6E-17 2.3E-21 181.4 12.7 240 8-273 145-446 (450)
39 3a9z_A Selenocysteine lyase; P 99.7 4.5E-16 1.6E-20 172.6 18.3 220 522-764 18-257 (432)
40 1vjo_A Alanine--glyoxylate ami 99.7 4.7E-16 1.6E-20 169.9 17.4 196 525-764 36-233 (393)
41 1eg5_A Aminotransferase; PLP-d 99.7 1E-15 3.5E-20 165.8 19.8 204 524-764 3-214 (384)
42 3kgw_A Alanine-glyoxylate amin 99.7 3.4E-16 1.2E-20 170.1 15.9 201 521-764 20-222 (393)
43 3zrp_A Serine-pyruvate aminotr 99.7 4.2E-16 1.4E-20 168.8 15.8 171 556-764 29-201 (384)
44 2huf_A Alanine glyoxylate amin 99.7 5.4E-16 1.8E-20 169.2 16.5 170 557-764 47-218 (393)
45 1svv_A Threonine aldolase; str 99.7 8.7E-16 3E-20 164.8 15.5 204 525-764 17-227 (359)
46 2e7j_A SEP-tRNA:Cys-tRNA synth 99.6 6.2E-16 2.1E-20 167.2 14.3 169 559-764 50-221 (371)
47 1iug_A Putative aspartate amin 99.6 8.3E-16 2.8E-20 164.7 15.1 166 556-764 28-197 (352)
48 3ffr_A Phosphoserine aminotran 99.6 9.2E-16 3.1E-20 164.8 15.2 195 525-764 5-203 (362)
49 2ch1_A 3-hydroxykynurenine tra 99.6 1.5E-15 5.1E-20 165.9 17.0 200 522-764 16-217 (396)
50 1wyu_A Glycine dehydrogenase ( 99.6 1.7E-15 5.7E-20 169.5 17.1 228 483-764 30-273 (438)
51 1t3i_A Probable cysteine desul 99.6 3.4E-15 1.2E-19 163.9 19.1 203 524-764 30-242 (420)
52 1v72_A Aldolase; PLP-dependent 99.6 3.3E-16 1.1E-20 168.1 10.2 171 561-763 42-222 (356)
53 3cai_A Possible aminotransfera 99.6 1.4E-15 5E-20 166.8 14.4 201 523-763 27-237 (406)
54 1m32_A 2-aminoethylphosphonate 99.6 1.9E-15 6.7E-20 162.3 15.0 168 562-764 37-205 (366)
55 3e9k_A Kynureninase; kynurenin 99.6 3.2E-15 1.1E-19 168.2 16.4 207 524-764 69-289 (465)
56 1kmj_A Selenocysteine lyase; p 99.6 6.3E-15 2.2E-19 160.8 17.3 203 524-764 25-237 (406)
57 3f0h_A Aminotransferase; RER07 99.6 5.3E-15 1.8E-19 160.4 15.8 169 557-764 47-218 (376)
58 2vyc_A Biodegradative arginine 99.6 1.7E-14 5.8E-19 172.6 18.6 168 565-763 208-397 (755)
59 2x3l_A ORN/Lys/Arg decarboxyla 99.6 9.9E-16 3.4E-20 172.5 6.8 162 561-764 56-223 (446)
60 1elu_A L-cysteine/L-cystine C- 99.6 3E-14 1E-18 154.8 16.8 168 558-764 55-232 (390)
61 2z67_A O-phosphoseryl-tRNA(SEC 99.5 3.6E-14 1.2E-18 160.0 14.2 215 20-266 185-454 (456)
62 1j32_A Aspartate aminotransfer 99.5 5.2E-14 1.8E-18 153.6 14.9 193 539-763 48-249 (388)
63 2w8t_A SPT, serine palmitoyltr 99.5 2.9E-13 9.9E-18 150.7 21.0 163 561-763 108-273 (427)
64 2fnu_A Aminotransferase; prote 99.5 6.2E-14 2.1E-18 151.6 13.9 159 564-763 34-192 (375)
65 1qz9_A Kynureninase; kynurenin 99.5 1.5E-13 5.2E-18 151.1 16.1 163 562-764 71-240 (416)
66 3dzz_A Putative pyridoxal 5'-p 99.5 2.4E-13 8.2E-18 147.9 16.9 192 539-763 45-246 (391)
67 1gd9_A Aspartate aminotransfer 99.5 2.2E-13 7.4E-18 148.7 16.2 193 539-763 44-245 (389)
68 3frk_A QDTB; aminotransferase, 99.5 4.4E-14 1.5E-18 153.7 9.8 163 554-763 32-197 (373)
69 1ax4_A Tryptophanase; tryptoph 99.5 3.3E-13 1.1E-17 151.2 17.0 180 553-763 71-276 (467)
70 1b9h_A AHBA synthase, protein 99.5 3.3E-13 1.1E-17 147.4 16.4 164 554-763 34-198 (388)
71 3ke3_A Putative serine-pyruvat 99.5 4.9E-13 1.7E-17 146.5 17.6 168 555-764 28-211 (379)
72 1o4s_A Aspartate aminotransfer 99.5 4.9E-13 1.7E-17 146.5 17.1 193 538-763 58-258 (389)
73 3f9t_A TDC, L-tyrosine decarbo 99.5 1.3E-12 4.6E-17 141.5 19.4 221 11-267 126-395 (397)
74 3tqx_A 2-amino-3-ketobutyrate 99.5 8.1E-13 2.8E-17 144.1 17.8 167 561-763 87-255 (399)
75 2c81_A Glutamine-2-deoxy-scyll 99.5 2.5E-13 8.5E-18 150.4 13.9 160 562-763 42-202 (418)
76 3nyt_A Aminotransferase WBPE; 99.5 1.1E-13 3.9E-18 150.4 10.5 176 539-763 18-196 (367)
77 3uwc_A Nucleotide-sugar aminot 99.5 3.2E-13 1.1E-17 146.4 14.0 176 539-763 21-198 (374)
78 1rv3_A Serine hydroxymethyltra 99.5 2E-13 7E-18 155.1 12.9 175 554-764 82-267 (483)
79 2rfv_A Methionine gamma-lyase; 99.5 5E-13 1.7E-17 147.3 15.6 156 560-763 62-223 (398)
80 3nra_A Aspartate aminotransfer 99.5 6.8E-13 2.3E-17 145.3 16.2 179 554-763 74-265 (407)
81 1c4k_A Protein (ornithine deca 99.4 1.6E-13 5.6E-18 163.2 11.9 170 564-763 175-366 (730)
82 3dr4_A Putative perosamine syn 99.4 3E-13 1E-17 148.1 12.7 156 566-763 60-216 (391)
83 2gb3_A Aspartate aminotransfer 99.4 3E-13 1E-17 149.3 12.4 190 539-763 61-256 (409)
84 2zc0_A Alanine glyoxylate tran 99.4 2.5E-12 8.6E-17 141.1 19.7 182 554-763 71-258 (407)
85 2cb1_A O-acetyl homoserine sul 99.4 6.6E-13 2.2E-17 147.3 15.1 155 560-763 54-214 (412)
86 1o69_A Aminotransferase; struc 99.4 1.2E-12 4.2E-17 143.9 16.8 160 566-764 36-195 (394)
87 2o0r_A RV0858C (N-succinyldiam 99.4 4.7E-13 1.6E-17 147.6 13.5 193 539-763 43-245 (411)
88 1u08_A Hypothetical aminotrans 99.4 7.7E-13 2.6E-17 144.3 15.0 194 538-763 47-248 (386)
89 3a2b_A Serine palmitoyltransfe 99.4 1.4E-12 4.9E-17 142.8 17.1 165 560-763 86-252 (398)
90 2oqx_A Tryptophanase; lyase, p 99.4 2.1E-12 7.3E-17 144.6 18.2 207 523-759 41-273 (467)
91 1xi9_A Putative transaminase; 99.4 1.1E-12 3.8E-17 144.4 15.6 189 540-763 60-257 (406)
92 1fc4_A 2-amino-3-ketobutyrate 99.4 3E-12 1E-16 140.2 18.8 166 562-763 90-257 (401)
93 3qm2_A Phosphoserine aminotran 99.4 2.4E-14 8.3E-19 158.5 1.8 195 524-764 28-233 (386)
94 1v2d_A Glutamine aminotransfer 99.4 5.5E-13 1.9E-17 145.3 12.5 162 567-763 66-234 (381)
95 2a7v_A Serine hydroxymethyltra 99.4 7.6E-13 2.6E-17 150.9 14.0 172 556-763 94-276 (490)
96 3m5u_A Phosphoserine aminotran 99.4 2.1E-13 7.2E-18 149.7 8.9 191 524-764 5-205 (361)
97 3b8x_A WBDK, pyridoxamine 5-ph 99.4 2.3E-12 7.8E-17 141.1 15.7 168 555-763 31-200 (390)
98 3hl2_A O-phosphoseryl-tRNA(SEC 99.4 1.5E-12 5E-17 145.2 14.2 230 20-275 171-466 (501)
99 1gc0_A Methionine gamma-lyase; 99.4 1.2E-12 4.2E-17 144.4 13.6 154 562-763 65-224 (398)
100 4dq6_A Putative pyridoxal phos 99.4 2E-12 6.7E-17 140.7 14.9 189 539-763 50-250 (391)
101 3e77_A Phosphoserine aminotran 99.4 1.7E-13 5.8E-18 151.3 6.3 194 526-764 16-218 (377)
102 3n0l_A Serine hydroxymethyltra 99.4 2.2E-12 7.4E-17 141.8 14.9 169 555-763 64-237 (417)
103 3cq5_A Histidinol-phosphate am 99.4 1.1E-11 3.6E-16 134.8 20.2 172 560-763 71-243 (369)
104 2vi8_A Serine hydroxymethyltra 99.4 1.1E-12 3.7E-17 143.6 12.1 168 556-763 63-236 (405)
105 3g0t_A Putative aminotransfera 99.4 3.1E-12 1.1E-16 141.8 15.5 183 552-763 76-272 (437)
106 3qhx_A Cystathionine gamma-syn 99.4 3.1E-12 1.1E-16 141.3 15.4 153 563-763 67-225 (392)
107 3l8a_A METC, putative aminotra 99.4 4E-12 1.4E-16 140.9 15.6 172 561-763 99-280 (421)
108 3kax_A Aminotransferase, class 99.4 2.7E-12 9.2E-17 139.2 13.9 191 538-763 41-242 (383)
109 1bs0_A Protein (8-amino-7-oxon 99.4 1.2E-11 4.2E-16 134.5 18.7 160 562-763 84-245 (384)
110 3acz_A Methionine gamma-lyase; 99.4 3.9E-12 1.3E-16 140.2 14.7 153 563-763 60-218 (389)
111 3ly1_A Putative histidinol-pho 99.4 1.7E-11 5.9E-16 131.7 19.3 169 563-763 52-225 (354)
112 2ctz_A O-acetyl-L-homoserine s 99.4 6.8E-12 2.3E-16 139.9 16.4 150 565-762 61-217 (421)
113 3lws_A Aromatic amino acid bet 99.4 4.7E-12 1.6E-16 136.4 14.6 195 523-763 12-216 (357)
114 3euc_A Histidinol-phosphate am 99.4 7.3E-12 2.5E-16 135.5 16.0 164 565-763 70-238 (367)
115 3piu_A 1-aminocyclopropane-1-c 99.3 5.3E-12 1.8E-16 140.4 15.1 185 555-763 83-285 (435)
116 1yiz_A Kynurenine aminotransfe 99.3 4.2E-12 1.4E-16 140.7 14.1 193 539-763 55-267 (429)
117 1c7n_A Cystalysin; transferase 99.3 7.2E-12 2.5E-16 137.1 15.5 192 538-763 48-250 (399)
118 1jg8_A L-ALLO-threonine aldola 99.3 4.6E-12 1.6E-16 135.8 13.6 168 554-759 34-210 (347)
119 2z61_A Probable aspartate amin 99.3 1.5E-11 5.1E-16 133.3 17.7 185 539-763 47-234 (370)
120 1vp4_A Aminotransferase, putat 99.3 1.7E-11 6E-16 135.9 18.6 198 537-763 61-271 (425)
121 3h14_A Aminotransferase, class 99.3 1.4E-11 4.7E-16 134.6 17.3 188 539-763 49-242 (391)
122 2dkj_A Serine hydroxymethyltra 99.3 1.3E-12 4.4E-17 143.1 9.1 168 556-763 63-236 (407)
123 2oga_A Transaminase; PLP-depen 99.3 6.3E-12 2.1E-16 138.3 14.6 156 565-763 66-224 (399)
124 1iay_A ACC synthase 2, 1-amino 99.3 1.2E-11 4.2E-16 137.0 16.9 180 559-763 84-280 (428)
125 2ez2_A Beta-tyrosinase, tyrosi 99.3 2.9E-11 1E-15 135.1 19.6 170 553-763 70-267 (456)
126 3ele_A Amino transferase; RER0 99.3 1.5E-11 5.1E-16 134.5 16.8 178 553-763 71-260 (398)
127 1mdo_A ARNB aminotransferase; 99.3 6.1E-12 2.1E-16 137.2 13.6 154 565-763 42-198 (393)
128 1d2f_A MALY protein; aminotran 99.3 1.1E-11 3.6E-16 135.5 15.4 191 538-763 45-245 (390)
129 3pj0_A LMO0305 protein; struct 99.3 8.2E-12 2.8E-16 134.5 13.5 160 564-763 50-218 (359)
130 1e5e_A MGL, methionine gamma-l 99.3 1.2E-11 4.1E-16 137.1 15.0 152 564-763 64-222 (404)
131 1cs1_A CGS, protein (cystathio 99.3 2.1E-11 7E-16 133.6 16.6 152 564-763 54-211 (386)
132 3ju7_A Putative PLP-dependent 99.3 4E-11 1.4E-15 131.9 18.5 165 557-763 35-201 (377)
133 3gbx_A Serine hydroxymethyltra 99.3 1.2E-11 4E-16 135.8 14.1 165 559-763 73-242 (420)
134 1w23_A Phosphoserine aminotran 99.3 2E-12 6.9E-17 139.1 7.1 162 557-764 43-207 (360)
135 3ffh_A Histidinol-phosphate am 99.3 2.3E-11 7.9E-16 131.3 15.4 163 565-763 70-237 (363)
136 3tcm_A Alanine aminotransferas 99.3 5.9E-11 2E-15 135.3 19.6 154 550-728 126-284 (500)
137 2zyj_A Alpha-aminodipate amino 99.3 3E-11 1E-15 132.4 16.3 188 537-763 50-249 (397)
138 3n75_A LDC, lysine decarboxyla 99.3 2.5E-11 8.4E-16 143.7 16.7 166 564-763 197-378 (715)
139 2x5d_A Probable aminotransfera 99.3 2.5E-11 8.5E-16 133.9 15.6 193 539-763 55-257 (412)
140 1qgn_A Protein (cystathionine 99.3 6.1E-11 2.1E-15 133.6 19.0 156 562-764 114-275 (445)
141 1pff_A Methionine gamma-lyase; 99.3 1.2E-11 4.1E-16 132.0 12.6 150 566-763 2-158 (331)
142 1b5p_A Protein (aspartate amin 99.3 3.2E-11 1.1E-15 131.8 16.1 175 554-763 64-246 (385)
143 3fsl_A Aromatic-amino-acid ami 99.3 1.4E-10 4.8E-15 126.6 21.0 199 536-763 47-259 (397)
144 2po3_A 4-dehydrase; external a 99.3 4.6E-11 1.6E-15 132.5 17.0 173 539-763 34-210 (424)
145 2dou_A Probable N-succinyldiam 99.3 4E-11 1.4E-15 130.3 16.2 193 539-763 43-242 (376)
146 1vef_A Acetylornithine/acetyl- 99.3 2.5E-11 8.6E-16 132.8 14.5 164 562-764 87-266 (395)
147 3ndn_A O-succinylhomoserine su 99.3 3.4E-11 1.2E-15 134.3 15.6 152 564-763 83-240 (414)
148 3kki_A CAI-1 autoinducer synth 99.3 5E-11 1.7E-15 131.3 16.6 152 565-757 107-261 (409)
149 3aow_A Putative uncharacterize 99.3 9.8E-11 3.3E-15 131.5 19.3 197 537-763 94-300 (448)
150 3ri6_A O-acetylhomoserine sulf 99.3 3E-11 1E-15 135.5 15.0 150 556-757 80-233 (430)
151 2fyf_A PSAT, phosphoserine ami 99.3 1.2E-11 4.1E-16 135.9 11.5 159 556-764 72-234 (398)
152 3fdb_A Beta C-S lyase, putativ 99.3 4.6E-11 1.6E-15 129.4 15.8 166 561-761 61-233 (377)
153 3ezs_A Aminotransferase ASPB; 99.3 1.5E-10 5.3E-15 125.3 19.9 194 538-763 40-243 (376)
154 3get_A Histidinol-phosphate am 99.3 7.1E-11 2.4E-15 127.6 17.1 161 566-763 69-239 (365)
155 3b46_A Aminotransferase BNA3; 99.3 1.7E-11 5.8E-16 137.3 12.6 195 537-763 73-286 (447)
156 3op7_A Aminotransferase class 99.3 2.3E-11 7.8E-16 132.0 13.2 171 552-763 57-234 (375)
157 3ftb_A Histidinol-phosphate am 99.3 5.1E-11 1.7E-15 128.2 15.5 159 565-763 64-227 (361)
158 3i16_A Aluminum resistance pro 99.3 3.3E-11 1.1E-15 135.1 14.5 148 569-756 80-248 (427)
159 1bw0_A TAT, protein (tyrosine 99.3 3.8E-11 1.3E-15 132.2 14.8 177 554-763 71-265 (416)
160 2o1b_A Aminotransferase, class 99.3 4.1E-11 1.4E-15 132.2 15.0 178 554-763 81-265 (404)
161 2c0r_A PSAT, phosphoserine ami 99.3 1.9E-11 6.4E-16 132.2 11.9 158 556-764 43-208 (362)
162 3ecd_A Serine hydroxymethyltra 99.2 3.1E-11 1.1E-15 132.6 13.8 163 561-763 77-245 (425)
163 3jtx_A Aminotransferase; NP_28 99.2 6.1E-11 2.1E-15 129.4 15.4 197 539-763 48-257 (396)
164 2bwn_A 5-aminolevulinate synth 99.2 4.3E-10 1.5E-14 123.1 22.1 161 562-758 91-254 (401)
165 3e2y_A Kynurenine-oxoglutarate 99.2 2.8E-11 9.7E-16 132.7 12.5 194 539-763 41-252 (410)
166 4f4e_A Aromatic-amino-acid ami 99.2 2.7E-10 9.2E-15 126.1 20.0 232 502-762 36-280 (420)
167 1ibj_A CBL, cystathionine beta 99.2 5.8E-11 2E-15 134.4 14.9 152 563-763 134-291 (464)
168 2fq6_A Cystathionine beta-lyas 99.2 5.4E-11 1.8E-15 132.8 14.3 156 556-763 80-243 (415)
169 3fvs_A Kynurenine--oxoglutarat 99.2 3.3E-11 1.1E-15 132.8 12.5 179 553-763 62-259 (422)
170 3jzl_A Putative cystathionine 99.2 5E-11 1.7E-15 132.9 13.5 147 569-757 66-232 (409)
171 3dyd_A Tyrosine aminotransfera 99.2 8.2E-11 2.8E-15 130.8 14.1 177 553-763 91-275 (427)
172 3ht4_A Aluminum resistance pro 99.2 2.4E-11 8.3E-16 136.3 9.7 160 564-763 67-246 (431)
173 2ord_A Acoat, acetylornithine 99.2 1.5E-10 5.2E-15 126.7 14.8 166 562-763 82-263 (397)
174 3h7f_A Serine hydroxymethyltra 99.2 4.2E-11 1.4E-15 134.3 10.4 168 556-763 85-258 (447)
175 1ajs_A Aspartate aminotransfer 99.2 4.8E-10 1.6E-14 123.3 18.4 202 538-763 52-270 (412)
176 7aat_A Aspartate aminotransfer 99.2 6.5E-10 2.2E-14 121.7 19.3 227 503-757 16-255 (401)
177 2ay1_A Aroat, aromatic amino a 99.2 7.5E-10 2.6E-14 120.8 19.7 179 553-763 64-255 (394)
178 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.2 1.8E-10 6E-15 128.5 15.0 150 566-750 66-216 (437)
179 2eh6_A Acoat, acetylornithine 99.2 1.4E-10 4.9E-15 125.5 13.5 165 564-764 72-253 (375)
180 1yaa_A Aspartate aminotransfer 99.2 5.1E-10 1.8E-14 123.2 18.1 231 503-763 17-266 (412)
181 1wyu_B Glycine dehydrogenase s 99.2 1.8E-10 6.2E-15 130.3 14.8 226 11-269 159-440 (474)
182 3hvy_A Cystathionine beta-lyas 99.2 1.4E-10 4.9E-15 129.9 13.6 147 569-756 81-248 (427)
183 4adb_A Succinylornithine trans 99.1 2.2E-10 7.6E-15 125.4 14.3 166 562-763 81-263 (406)
184 1s0a_A Adenosylmethionine-8-am 99.1 1.5E-09 5.1E-14 120.3 21.0 175 564-764 88-287 (429)
185 1n8p_A Cystathionine gamma-lya 99.1 1.5E-10 5.2E-15 127.9 12.8 145 563-757 56-208 (393)
186 3if2_A Aminotransferase; YP_26 99.1 1.4E-10 4.8E-15 129.0 12.5 196 552-763 77-287 (444)
187 3ihj_A Alanine aminotransferas 99.1 5.4E-10 1.8E-14 127.4 17.5 155 551-728 122-282 (498)
188 3nnk_A Ureidoglycine-glyoxylat 99.1 4.4E-10 1.5E-14 122.9 15.9 226 20-270 97-390 (411)
189 3cog_A Cystathionine gamma-lya 99.1 3.1E-10 1E-14 125.9 14.3 154 557-763 66-226 (403)
190 2q7w_A Aspartate aminotransfer 99.1 1E-09 3.4E-14 119.7 18.2 183 553-763 64-258 (396)
191 3rq1_A Aminotransferase class 99.1 1E-09 3.6E-14 120.9 18.1 196 539-763 61-274 (418)
192 3t18_A Aminotransferase class 99.1 7.4E-10 2.5E-14 121.9 16.0 217 517-763 39-273 (413)
193 3nmy_A Xometc, cystathionine g 99.1 7.4E-10 2.5E-14 122.9 16.0 150 556-758 65-219 (400)
194 1lc5_A COBD, L-threonine-O-3-p 99.1 5.8E-10 2E-14 120.7 14.7 161 566-763 63-228 (364)
195 3hdo_A Histidinol-phosphate am 99.1 5E-10 1.7E-14 121.0 14.1 157 566-763 69-226 (360)
196 3p1t_A Putative histidinol-pho 99.1 3.4E-09 1.2E-13 112.7 19.8 157 564-763 53-210 (337)
197 3e9k_A Kynureninase; kynurenin 99.1 9E-10 3.1E-14 123.7 15.8 223 22-269 170-460 (465)
198 4hvk_A Probable cysteine desul 99.1 1.9E-09 6.5E-14 115.9 17.8 223 20-273 97-376 (382)
199 3meb_A Aspartate aminotransfer 99.1 8.9E-09 3.1E-13 115.3 23.9 228 501-757 35-282 (448)
200 3isl_A Purine catabolism prote 99.1 7.7E-10 2.6E-14 121.1 14.8 224 20-270 95-390 (416)
201 2aeu_A Hypothetical protein MJ 99.1 5.1E-10 1.8E-14 122.6 13.2 156 561-763 57-218 (374)
202 1fg7_A Histidinol phosphate am 99.1 7.3E-10 2.5E-14 120.0 14.1 160 566-763 62-226 (356)
203 2pb2_A Acetylornithine/succiny 99.1 9.1E-10 3.1E-14 122.3 15.1 167 562-763 99-281 (420)
204 3ruy_A Ornithine aminotransfer 99.1 1.1E-09 3.7E-14 119.6 15.5 167 563-763 79-263 (392)
205 2x5f_A Aspartate_tyrosine_phen 99.1 5.5E-10 1.9E-14 123.8 12.6 180 553-763 83-283 (430)
206 1sff_A 4-aminobutyrate aminotr 99.0 2.6E-09 8.9E-14 117.8 17.4 174 562-763 84-279 (426)
207 1wyu_A Glycine dehydrogenase ( 99.0 1E-09 3.5E-14 122.4 14.2 217 11-266 153-436 (438)
208 3dxv_A Alpha-amino-epsilon-cap 99.0 3.3E-09 1.1E-13 117.9 18.2 175 560-763 84-281 (439)
209 3nx3_A Acoat, acetylornithine 99.0 2.2E-09 7.6E-14 117.4 16.1 167 561-763 77-259 (395)
210 2yrr_A Aminotransferase, class 99.0 3E-09 1E-13 113.2 16.5 223 20-268 83-351 (353)
211 2r2n_A Kynurenine/alpha-aminoa 99.0 4.3E-09 1.5E-13 116.7 16.8 183 558-763 78-274 (425)
212 3ppl_A Aspartate aminotransfer 99.0 2.5E-09 8.4E-14 118.5 14.4 175 567-763 83-271 (427)
213 3kgw_A Alanine-glyoxylate amin 99.0 2.2E-09 7.6E-14 116.2 13.4 223 24-271 113-389 (393)
214 3ez1_A Aminotransferase MOCR f 99.0 2E-09 6.9E-14 118.8 13.2 175 567-763 75-264 (423)
215 3zrp_A Serine-pyruvate aminotr 99.0 4.2E-09 1.4E-13 113.6 15.3 222 20-271 86-364 (384)
216 2eo5_A 419AA long hypothetical 99.0 7.1E-09 2.4E-13 114.9 17.0 170 564-763 88-293 (419)
217 1t3i_A Probable cysteine desul 99.0 5.5E-09 1.9E-13 114.3 15.8 218 24-270 135-413 (420)
218 2dr1_A PH1308 protein, 386AA l 99.0 7.3E-09 2.5E-13 112.0 16.4 225 20-271 104-380 (386)
219 3i4j_A Aminotransferase, class 98.9 1.3E-08 4.3E-13 112.9 17.4 177 562-762 72-272 (430)
220 4eb5_A Probable cysteine desul 98.9 1.8E-08 6E-13 108.8 17.6 222 20-272 97-375 (382)
221 3b1d_A Betac-S lyase; HET: PLP 98.5 1.1E-10 3.8E-15 127.8 0.0 172 560-763 68-250 (392)
222 3f6t_A Aspartate aminotransfer 98.9 5.4E-09 1.8E-13 120.2 13.6 191 535-757 117-318 (533)
223 1vjo_A Alanine--glyoxylate ami 98.9 7.9E-09 2.7E-13 112.5 14.2 220 20-266 118-391 (393)
224 1z7d_A Ornithine aminotransfer 98.9 1.7E-08 5.7E-13 112.7 17.1 169 562-763 107-293 (433)
225 4e77_A Glutamate-1-semialdehyd 98.9 4.5E-08 1.5E-12 108.5 20.4 164 562-763 93-279 (429)
226 3fq8_A Glutamate-1-semialdehyd 98.9 7.5E-09 2.5E-13 114.6 13.9 166 560-763 90-278 (427)
227 3a8u_X Omega-amino acid--pyruv 98.9 2.7E-08 9.2E-13 111.0 18.5 177 563-763 94-300 (449)
228 1kmj_A Selenocysteine lyase; p 98.9 2.6E-08 9E-13 108.2 17.8 218 24-270 130-405 (406)
229 3ffr_A Phosphoserine aminotran 98.9 1.2E-08 4E-13 109.2 14.5 216 21-266 93-360 (362)
230 4eu1_A Mitochondrial aspartate 98.9 5.8E-08 2E-12 106.7 20.4 183 552-762 73-269 (409)
231 2oat_A Ornithine aminotransfer 98.9 2.5E-08 8.5E-13 111.6 17.3 168 564-763 120-304 (439)
232 2z9v_A Aspartate aminotransfer 98.9 2.1E-08 7.1E-13 109.0 16.1 224 21-270 93-371 (392)
233 3l44_A Glutamate-1-semialdehyd 98.9 2.3E-08 7.9E-13 110.9 16.5 163 563-763 96-281 (434)
234 3k28_A Glutamate-1-semialdehyd 98.9 1.6E-08 5.5E-13 112.2 14.9 163 563-763 94-279 (429)
235 2huf_A Alanine glyoxylate amin 98.9 1.2E-08 4.1E-13 110.9 13.5 223 24-271 109-384 (393)
236 1uu1_A Histidinol-phosphate am 98.9 1.8E-08 6.1E-13 107.8 14.3 152 565-763 59-214 (335)
237 1eg5_A Aminotransferase; PLP-d 98.8 5E-08 1.7E-12 105.1 17.6 217 20-271 98-377 (384)
238 3lvm_A Cysteine desulfurase; s 98.8 7.8E-08 2.7E-12 105.6 19.0 218 20-272 122-401 (423)
239 3g7q_A Valine-pyruvate aminotr 98.8 6.2E-09 2.1E-13 114.3 10.1 197 537-763 49-261 (417)
240 2cy8_A D-phgat, D-phenylglycin 98.8 5.4E-08 1.8E-12 108.8 17.7 166 560-763 95-280 (453)
241 3fkd_A L-threonine-O-3-phospha 98.8 5.1E-08 1.7E-12 104.6 16.8 153 566-763 54-209 (350)
242 3n5m_A Adenosylmethionine-8-am 98.8 8.8E-08 3E-12 107.0 18.9 178 560-763 89-296 (452)
243 3qgu_A LL-diaminopimelate amin 98.8 3E-08 1E-12 110.4 14.9 172 553-763 106-294 (449)
244 3dod_A Adenosylmethionine-8-am 98.8 9E-08 3.1E-12 107.0 18.7 178 561-763 86-292 (448)
245 2ch1_A 3-hydroxykynurenine tra 98.8 3.2E-08 1.1E-12 107.6 14.5 221 25-272 109-385 (396)
246 1zod_A DGD, 2,2-dialkylglycine 98.8 5.2E-08 1.8E-12 107.9 16.3 172 562-763 85-283 (433)
247 3ei9_A LL-diaminopimelate amin 98.8 3.1E-08 1.1E-12 109.7 14.4 173 553-763 93-282 (432)
248 2epj_A Glutamate-1-semialdehyd 98.8 6.2E-08 2.1E-12 107.5 16.6 165 561-763 95-282 (434)
249 3d6k_A Putative aminotransfera 98.8 3.3E-08 1.1E-12 109.5 14.2 125 633-763 133-269 (422)
250 3asa_A LL-diaminopimelate amin 98.8 4E-08 1.4E-12 107.8 14.6 165 558-763 75-248 (400)
251 1m32_A 2-aminoethylphosphonate 98.8 5.5E-08 1.9E-12 104.0 14.9 220 24-267 95-362 (366)
252 2bkw_A Alanine-glyoxylate amin 98.8 2.7E-08 9.3E-13 107.4 12.5 219 20-267 97-381 (385)
253 3tfu_A Adenosylmethionine-8-am 98.8 6.7E-08 2.3E-12 108.8 15.5 177 562-763 118-315 (457)
254 4a6r_A Omega transaminase; tra 98.8 1.8E-07 6.1E-12 105.0 18.8 178 561-763 93-300 (459)
255 3gju_A Putative aminotransfera 98.7 2.4E-07 8.4E-12 103.9 19.7 178 562-763 95-302 (460)
256 3oks_A 4-aminobutyrate transam 98.7 3E-07 1E-11 103.0 18.4 175 561-763 103-307 (451)
257 3hmu_A Aminotransferase, class 98.7 3.1E-07 1E-11 103.9 18.5 177 561-762 98-303 (472)
258 2cjg_A L-lysine-epsilon aminot 98.7 8.9E-08 3.1E-12 107.3 13.6 173 563-754 102-302 (449)
259 1elu_A L-cysteine/L-cystine C- 98.7 1.7E-07 5.8E-12 101.4 14.2 212 24-266 118-388 (390)
260 1ohv_A 4-aminobutyrate aminotr 98.7 1.2E-07 4.1E-12 107.2 13.4 182 560-753 108-330 (472)
261 2e7j_A SEP-tRNA:Cys-tRNA synth 98.6 9.6E-08 3.3E-12 102.7 11.9 221 20-269 102-369 (371)
262 1iug_A Putative aspartate amin 98.6 1.4E-07 4.9E-12 100.5 13.1 220 20-270 84-348 (352)
263 4ffc_A 4-aminobutyrate aminotr 98.6 7.6E-07 2.6E-11 99.9 18.8 176 561-763 106-305 (453)
264 1b9h_A AHBA synthase, protein 98.6 8.1E-07 2.8E-11 96.6 18.2 218 20-268 87-386 (388)
265 3i5t_A Aminotransferase; pyrid 98.6 9.6E-07 3.3E-11 99.9 19.1 178 561-762 96-302 (476)
266 3cai_A Possible aminotransfera 98.6 1.8E-07 6E-12 102.2 12.2 218 20-266 122-405 (406)
267 3vax_A Putative uncharacterize 98.6 8.8E-08 3E-12 104.3 9.3 225 20-268 118-398 (400)
268 1v72_A Aldolase; PLP-dependent 98.6 1.3E-07 4.5E-12 100.9 10.3 220 20-269 92-352 (356)
269 1qz9_A Kynureninase; kynurenin 98.6 4.2E-07 1.4E-11 99.5 14.6 212 20-270 128-402 (416)
270 3f0h_A Aminotransferase; RER07 98.6 3.9E-07 1.3E-11 98.3 14.0 216 25-268 111-372 (376)
271 2e7u_A Glutamate-1-semialdehyd 98.6 6.6E-07 2.3E-11 98.9 16.1 164 561-763 91-277 (424)
272 3qm2_A Phosphoserine aminotran 98.6 1.1E-07 3.9E-12 105.0 9.2 205 38-269 140-384 (386)
273 3e77_A Phosphoserine aminotran 98.5 2.9E-07 1E-11 101.4 11.0 216 27-269 121-374 (377)
274 1svv_A Threonine aldolase; str 98.5 9.4E-07 3.2E-11 94.2 14.5 216 20-269 99-357 (359)
275 1j32_A Aspartate aminotransfer 98.5 7.6E-07 2.6E-11 96.7 13.7 224 20-270 123-387 (388)
276 3a9z_A Selenocysteine lyase; P 98.5 6.7E-07 2.3E-11 98.7 13.1 223 20-271 132-429 (432)
277 3dzz_A Putative pyridoxal 5'-p 98.5 8.3E-07 2.8E-11 96.1 13.2 222 20-269 118-388 (391)
278 3euc_A Histidinol-phosphate am 98.4 2.7E-06 9.3E-11 91.5 16.3 214 20-267 118-365 (367)
279 2c0r_A PSAT, phosphoserine ami 98.4 1.5E-06 5.2E-11 93.5 14.2 216 21-269 102-360 (362)
280 3tqx_A 2-amino-3-ketobutyrate 98.4 3.1E-06 1E-10 91.8 16.3 220 20-270 136-396 (399)
281 3ffh_A Histidinol-phosphate am 98.4 4.7E-06 1.6E-10 89.5 17.6 215 20-266 117-362 (363)
282 3nra_A Aspartate aminotransfer 98.4 1.6E-06 5.5E-11 94.4 13.3 224 20-270 135-405 (407)
283 2fnu_A Aminotransferase; prote 98.4 8E-07 2.7E-11 95.6 10.7 222 20-270 83-372 (375)
284 3dr4_A Putative perosamine syn 98.4 4.8E-07 1.7E-11 98.6 8.0 218 20-266 105-389 (391)
285 3ou5_A Serine hydroxymethyltra 98.4 5.5E-06 1.9E-10 92.3 16.3 169 555-760 93-274 (490)
286 2bwn_A 5-aminolevulinate synth 98.4 3.1E-06 1E-10 92.4 14.2 221 20-269 141-399 (401)
287 2zc0_A Alanine glyoxylate tran 98.3 2.7E-06 9.3E-11 92.9 13.3 229 20-271 131-405 (407)
288 3uwc_A Nucleotide-sugar aminot 98.3 3.2E-07 1.1E-11 99.0 5.7 219 20-268 87-369 (374)
289 3m5u_A Phosphoserine aminotran 98.3 2E-06 6.9E-11 94.1 10.9 211 26-269 109-359 (361)
290 2zy4_A L-aspartate beta-decarb 98.3 3.4E-06 1.2E-10 97.3 13.0 184 553-763 133-327 (546)
291 1w23_A Phosphoserine aminotran 98.3 2.1E-06 7.3E-11 91.9 10.6 213 20-268 103-358 (360)
292 3b8x_A WBDK, pyridoxamine 5-ph 98.3 5.4E-06 1.9E-10 90.3 14.0 214 20-263 89-389 (390)
293 4dq6_A Putative pyridoxal phos 98.3 3.7E-06 1.3E-10 91.0 12.5 217 20-266 123-389 (391)
294 2oga_A Transaminase; PLP-depen 98.3 4.6E-06 1.6E-10 91.4 13.4 218 20-269 112-395 (399)
295 1o69_A Aminotransferase; struc 98.3 1.5E-05 5E-10 87.3 17.4 234 20-267 81-384 (394)
296 2fyf_A PSAT, phosphoserine ami 98.3 7.3E-06 2.5E-10 89.6 15.0 212 25-268 135-396 (398)
297 2w8t_A SPT, serine palmitoyltr 98.3 1.5E-05 5.2E-10 88.2 17.4 225 20-274 157-419 (427)
298 3dyd_A Tyrosine aminotransfera 98.2 5.6E-06 1.9E-10 91.7 13.2 227 20-270 151-424 (427)
299 3ke3_A Putative serine-pyruvat 98.2 7.1E-06 2.4E-10 89.4 13.3 223 24-271 89-377 (379)
300 2vyc_A Biodegradative arginine 98.2 5.1E-06 1.7E-10 99.4 12.9 236 20-271 254-606 (755)
301 3ly1_A Putative histidinol-pho 98.2 2E-05 6.7E-10 84.2 15.6 215 20-268 101-350 (354)
302 3op7_A Aminotransferase class 98.2 1.3E-05 4.5E-10 86.4 14.3 222 20-269 114-370 (375)
303 1v2d_A Glutamine aminotransfer 98.2 6.2E-06 2.1E-10 89.3 11.6 218 20-270 111-371 (381)
304 1bw0_A TAT, protein (tyrosine 98.2 2.2E-05 7.4E-10 86.0 16.1 228 20-270 137-413 (416)
305 3l8a_A METC, putative aminotra 98.2 6.9E-06 2.4E-10 90.6 12.2 220 20-267 152-419 (421)
306 2c81_A Glutamine-2-deoxy-scyll 98.1 1.2E-05 4E-10 88.6 12.7 222 20-269 91-413 (418)
307 3frk_A QDTB; aminotransferase, 98.1 1.2E-06 4E-11 94.9 4.5 217 20-267 85-365 (373)
308 2po3_A 4-dehydrase; external a 98.1 9.7E-06 3.3E-10 89.5 11.8 223 20-271 99-387 (424)
309 3ftb_A Histidinol-phosphate am 98.1 6.2E-05 2.1E-09 80.4 17.7 218 20-268 107-359 (361)
310 1xi9_A Putative transaminase; 98.1 2.5E-05 8.7E-10 85.4 14.6 222 20-270 134-403 (406)
311 2zyj_A Alpha-aminodipate amino 98.1 4.6E-05 1.6E-09 83.0 16.6 221 20-271 124-394 (397)
312 3piu_A 1-aminocyclopropane-1-c 98.1 0.00017 6E-09 79.6 21.4 234 20-270 144-432 (435)
313 3cq5_A Histidinol-phosphate am 98.1 4.7E-05 1.6E-09 82.2 16.4 211 20-267 125-365 (369)
314 3k7y_A Aspartate aminotransfer 98.1 2.4E-05 8.3E-10 86.7 14.3 149 552-727 66-220 (405)
315 1gd9_A Aspartate aminotransfer 98.1 1.7E-05 5.8E-10 86.0 12.7 221 20-269 120-385 (389)
316 2dkj_A Serine hydroxymethyltra 98.1 9.5E-06 3.3E-10 88.3 10.7 221 25-269 126-387 (407)
317 1vp4_A Aminotransferase, putat 98.1 2E-05 6.8E-10 87.0 13.4 232 20-274 142-422 (425)
318 1mdo_A ARNB aminotransferase; 98.1 1.3E-05 4.6E-10 86.8 11.7 219 20-268 88-384 (393)
319 2gb3_A Aspartate aminotransfer 98.1 7E-06 2.4E-10 90.1 9.1 221 20-272 135-404 (409)
320 3g0t_A Putative aminotransfera 98.0 5.9E-05 2E-09 83.0 16.3 221 20-268 142-435 (437)
321 1fc4_A 2-amino-3-ketobutyrate 98.0 5.6E-05 1.9E-09 82.2 15.5 221 20-270 138-397 (401)
322 3fdb_A Beta C-S lyase, putativ 98.0 5.6E-05 1.9E-09 81.3 15.2 218 20-268 114-374 (377)
323 1iay_A ACC synthase 2, 1-amino 98.0 0.00014 4.8E-09 80.0 18.6 231 21-268 142-425 (428)
324 1c7n_A Cystalysin; transferase 98.0 2.6E-05 8.9E-10 84.8 12.4 225 20-271 122-394 (399)
325 3get_A Histidinol-phosphate am 98.0 6.4E-05 2.2E-09 80.6 15.3 212 20-267 115-364 (365)
326 3kax_A Aminotransferase, class 98.0 3.1E-05 1.1E-09 83.4 12.7 219 20-266 115-381 (383)
327 3aow_A Putative uncharacterize 98.0 0.00014 4.9E-09 81.2 18.5 230 20-272 173-447 (448)
328 1rv3_A Serine hydroxymethyltra 98.0 0.00014 4.8E-09 82.2 18.5 217 27-269 158-430 (483)
329 2vi8_A Serine hydroxymethyltra 98.0 6E-05 2E-09 81.9 14.8 207 38-268 138-385 (405)
330 3gbx_A Serine hydroxymethyltra 98.0 7.7E-05 2.6E-09 81.3 15.2 207 39-268 146-394 (420)
331 2yky_A Beta-transaminase; tran 97.2 1E-06 3.5E-11 99.7 0.0 164 561-763 139-311 (465)
332 1o4s_A Aspartate aminotransfer 98.0 2.9E-05 1E-09 84.5 11.4 215 20-267 134-386 (389)
333 3a2b_A Serine palmitoyltransfe 97.9 0.00013 4.3E-09 79.4 16.3 219 20-269 136-391 (398)
334 1fg7_A Histidinol phosphate am 97.9 0.00014 4.8E-09 78.2 16.4 213 20-265 109-353 (356)
335 3tcm_A Alanine aminotransferas 97.9 0.00012 4.1E-09 83.1 16.3 242 20-273 191-497 (500)
336 3n0l_A Serine hydroxymethyltra 97.9 0.0002 6.9E-09 78.0 17.5 218 27-268 130-387 (417)
337 4ao9_A Beta-phenylalanine amin 97.9 6.4E-05 2.2E-09 84.7 13.6 162 562-762 127-297 (454)
338 2a7v_A Serine hydroxymethyltra 97.9 0.00014 4.9E-09 82.6 16.5 219 27-270 168-441 (490)
339 1u08_A Hypothetical aminotrans 97.9 6.6E-05 2.3E-09 81.3 13.1 216 20-265 124-385 (386)
340 1c4k_A Protein (ornithine deca 97.9 3.4E-05 1.2E-09 91.9 11.0 243 20-271 222-567 (730)
341 1bs0_A Protein (8-amino-7-oxon 97.9 8.2E-05 2.8E-09 80.4 12.9 217 20-266 132-383 (384)
342 3p1t_A Putative histidinol-pho 97.9 0.00019 6.4E-09 75.9 15.3 210 20-267 99-334 (337)
343 2o0r_A RV0858C (N-succinyldiam 97.9 2.5E-05 8.7E-10 85.6 8.7 219 20-268 119-394 (411)
344 3h14_A Aminotransferase, class 97.9 7.3E-05 2.5E-09 81.1 12.3 223 20-273 124-385 (391)
345 3kki_A CAI-1 autoinducer synth 97.8 0.00037 1.3E-08 76.1 18.0 215 20-269 152-403 (409)
346 2x3l_A ORN/Lys/Arg decarboxyla 97.8 2.1E-05 7.3E-10 88.1 7.7 207 20-267 105-350 (446)
347 3nyt_A Aminotransferase WBPE; 97.8 2.6E-05 8.8E-10 84.3 7.8 211 20-265 84-359 (367)
348 3ecd_A Serine hydroxymethyltra 97.8 0.00029 1E-08 76.8 16.0 209 39-270 148-397 (425)
349 1d2f_A MALY protein; aminotran 97.8 0.00018 6E-09 78.0 14.0 223 20-269 120-388 (390)
350 1b5p_A Protein (aspartate amin 97.8 7.8E-05 2.7E-09 81.0 10.8 217 21-266 125-381 (385)
351 2cb1_A O-acetyl homoserine sul 97.7 0.00016 5.6E-09 79.6 12.7 207 21-265 105-411 (412)
352 3ri6_A O-acetylhomoserine sulf 97.7 9.7E-05 3.3E-09 82.6 10.6 145 27-186 141-330 (430)
353 3lws_A Aromatic amino acid bet 97.7 0.00015 5.3E-09 77.4 11.8 98 154-266 254-355 (357)
354 2ez2_A Beta-tyrosinase, tyrosi 97.7 0.00031 1.1E-08 78.0 14.0 226 22-269 124-430 (456)
355 3bwn_A AT1G70560, L-tryptophan 97.7 0.00015 5.2E-09 79.4 11.2 149 561-757 71-222 (391)
356 3ele_A Amino transferase; RER0 97.7 0.00035 1.2E-08 75.8 14.0 217 20-270 133-396 (398)
357 2dou_A Probable N-succinyldiam 97.6 0.00049 1.7E-08 74.1 14.8 216 20-266 120-374 (376)
358 3fvs_A Kynurenine--oxoglutarat 97.6 0.00029 9.9E-09 77.1 12.8 233 20-268 124-420 (422)
359 1gc0_A Methionine gamma-lyase; 97.6 0.00029 1E-08 77.1 12.6 206 20-266 113-397 (398)
360 3pj0_A LMO0305 protein; struct 97.6 0.00053 1.8E-08 73.1 14.1 96 155-265 257-357 (359)
361 1cs1_A CGS, protein (cystathio 97.6 0.00069 2.4E-08 73.6 15.1 199 26-266 110-383 (386)
362 3ju7_A Putative PLP-dependent 97.6 0.00039 1.3E-08 76.0 12.6 221 20-268 87-373 (377)
363 1yiz_A Kynurenine aminotransfe 97.6 0.00049 1.7E-08 75.6 13.5 229 20-266 134-425 (429)
364 1ax4_A Tryptophanase; tryptoph 97.5 0.0007 2.4E-08 75.3 14.4 104 157-270 324-441 (467)
365 1e5e_A MGL, methionine gamma-l 97.5 0.00065 2.2E-08 74.8 13.6 213 21-273 111-398 (404)
366 2rfv_A Methionine gamma-lyase; 97.5 0.00017 5.7E-09 78.9 8.7 215 20-266 112-396 (398)
367 3ihj_A Alanine aminotransferas 97.5 0.0017 5.9E-08 73.6 17.1 230 20-273 190-496 (498)
368 2z61_A Probable aspartate amin 97.5 0.00048 1.7E-08 74.0 12.0 209 20-267 122-368 (370)
369 3hdo_A Histidinol-phosphate am 97.5 0.00026 8.7E-09 76.0 9.7 212 20-267 115-352 (360)
370 3bb8_A CDP-4-keto-6-deoxy-D-gl 97.5 0.0006 2E-08 75.5 12.9 215 20-267 119-433 (437)
371 1qgn_A Protein (cystathionine 97.5 0.00076 2.6E-08 75.7 13.6 153 27-194 173-367 (445)
372 1jg8_A L-ALLO-threonine aldola 97.4 0.00017 5.7E-09 76.7 7.0 215 27-269 96-345 (347)
373 2r2n_A Kynurenine/alpha-aminoa 97.4 0.0039 1.3E-07 68.5 18.0 228 20-269 141-423 (425)
374 3ez1_A Aminotransferase MOCR f 97.4 0.0019 6.4E-08 70.8 15.2 226 20-272 133-417 (423)
375 3qhx_A Cystathionine gamma-syn 97.4 0.00039 1.3E-08 76.3 9.5 142 29-185 127-293 (392)
376 4atq_A 4-aminobutyrate transam 97.4 0.0042 1.4E-07 69.9 18.2 173 563-762 108-305 (456)
377 1lc5_A COBD, L-threonine-O-3-p 97.4 0.0023 7.9E-08 68.5 15.2 219 20-270 107-360 (364)
378 3h7f_A Serine hydroxymethyltra 97.4 0.0035 1.2E-07 69.7 17.2 207 39-267 161-411 (447)
379 3e2y_A Kynurenine-oxoglutarate 97.3 0.00035 1.2E-08 76.0 8.6 227 20-265 118-408 (410)
380 2x5d_A Probable aminotransfera 97.3 0.00092 3.1E-08 73.1 12.0 224 20-270 132-398 (412)
381 2o1b_A Aminotransferase, class 97.3 0.0015 5.2E-08 71.4 13.0 218 20-267 142-400 (404)
382 4e3q_A Pyruvate transaminase; 97.3 0.0073 2.5E-07 68.2 18.5 170 561-754 110-307 (473)
383 3ndn_A O-succinylhomoserine su 97.2 0.00079 2.7E-08 74.7 10.0 150 21-185 130-308 (414)
384 2oqx_A Tryptophanase; lyase, p 97.2 0.0023 7.8E-08 71.0 13.4 100 156-269 325-441 (467)
385 3ppl_A Aspartate aminotransfer 97.2 0.0033 1.1E-07 69.1 14.4 224 20-271 142-421 (427)
386 2ctz_A O-acetyl-L-homoserine s 97.2 0.00097 3.3E-08 73.8 9.8 148 20-182 106-315 (421)
387 3if2_A Aminotransferase; YP_26 97.1 0.0066 2.3E-07 66.8 16.3 214 38-272 175-442 (444)
388 3rq1_A Aminotransferase class 97.1 0.0026 9E-08 69.5 12.1 219 20-270 135-415 (418)
389 2ord_A Acoat, acetylornithine 97.1 0.00084 2.9E-08 72.9 8.0 210 20-269 138-396 (397)
390 4a0g_A Adenosylmethionine-8-am 97.1 0.0059 2E-07 73.7 16.0 176 566-755 428-667 (831)
391 1sff_A 4-aminobutyrate aminotr 97.0 0.019 6.5E-07 62.6 18.6 234 20-270 138-424 (426)
392 2x5f_A Aspartate_tyrosine_phen 97.0 0.007 2.4E-07 66.4 15.1 219 20-270 146-429 (430)
393 3fkd_A L-threonine-O-3-phospha 97.0 0.0037 1.3E-07 66.4 12.2 209 20-267 98-339 (350)
394 3ezs_A Aminotransferase ASPB; 97.0 0.0035 1.2E-07 67.1 12.0 210 20-267 117-372 (376)
395 3d6k_A Putative aminotransfera 97.0 0.0075 2.6E-07 66.2 14.5 225 20-272 140-420 (422)
396 3b46_A Aminotransferase BNA3; 97.0 0.0016 5.3E-08 72.5 9.0 232 20-265 151-442 (447)
397 3nmy_A Xometc, cystathionine g 96.9 0.0018 6E-08 71.5 9.0 140 31-185 130-295 (400)
398 1uu1_A Histidinol-phosphate am 96.8 0.0081 2.8E-07 63.5 13.1 203 20-265 105-333 (335)
399 3jtx_A Aminotransferase; NP_28 96.8 0.012 4.2E-07 63.3 14.7 214 20-266 129-394 (396)
400 3b1d_A Betac-S lyase; HET: PLP 95.9 0.00018 6.2E-09 78.2 0.0 221 20-267 122-390 (392)
401 1vef_A Acetylornithine/acetyl- 96.8 0.01 3.4E-07 64.2 13.7 209 20-266 140-393 (395)
402 4h51_A Aspartate aminotransfer 96.8 0.01 3.6E-07 65.9 13.9 120 590-727 111-236 (420)
403 1ajs_A Aspartate aminotransfer 96.8 0.002 7E-08 70.1 8.0 213 20-269 139-410 (412)
404 3fsl_A Aromatic-amino-acid ami 96.8 0.0012 4.2E-08 71.3 6.1 75 20-100 130-215 (397)
405 3i16_A Aluminum resistance pro 96.7 0.0049 1.7E-07 68.7 10.6 174 26-226 142-355 (427)
406 2hox_A ALLIIN lyase 1; cystein 96.7 0.0018 6E-08 71.9 6.5 161 560-763 102-263 (427)
407 3ruy_A Ornithine aminotransfer 96.6 0.015 5.1E-07 62.7 13.5 186 50-267 171-391 (392)
408 3acz_A Methionine gamma-lyase; 96.6 0.015 5E-07 63.4 13.1 146 21-181 108-282 (389)
409 2eh6_A Acoat, acetylornithine 96.6 0.012 4E-07 63.0 11.9 183 49-266 160-374 (375)
410 3t18_A Aminotransferase class 96.5 0.026 9E-07 61.3 14.6 78 20-100 134-227 (413)
411 3cog_A Cystathionine gamma-lya 96.4 0.021 7.1E-07 62.7 12.9 64 24-100 122-191 (403)
412 4f4e_A Aromatic-amino-acid ami 96.3 0.0043 1.5E-07 68.1 6.8 76 20-100 152-237 (420)
413 3g7q_A Valine-pyruvate aminotr 96.3 0.018 6.1E-07 62.5 11.6 94 160-272 310-415 (417)
414 1ibj_A CBL, cystathionine beta 96.2 0.0042 1.4E-07 69.9 6.3 61 27-100 191-256 (464)
415 3jzl_A Putative cystathionine 96.2 0.01 3.6E-07 65.6 8.9 153 27-193 128-322 (409)
416 4adb_A Succinylornithine trans 96.1 0.034 1.2E-06 60.0 12.6 191 50-272 172-402 (406)
417 3ei9_A LL-diaminopimelate amin 96.1 0.047 1.6E-06 59.7 13.8 216 20-267 151-425 (432)
418 2eo5_A 419AA long hypothetical 96.0 0.14 5E-06 55.8 17.3 203 37-269 166-417 (419)
419 1pff_A Methionine gamma-lyase; 96.0 0.014 4.6E-07 61.5 8.5 68 20-100 46-123 (331)
420 3qgu_A LL-diaminopimelate amin 96.0 0.074 2.5E-06 58.5 14.8 216 20-267 164-437 (449)
421 2pb2_A Acetylornithine/succiny 96.0 0.028 9.6E-07 61.8 11.3 107 141-271 309-419 (420)
422 2ay1_A Aroat, aromatic amino a 96.0 0.0066 2.3E-07 65.5 6.0 211 20-267 126-393 (394)
423 2aeu_A Hypothetical protein MJ 95.9 0.018 6.2E-07 62.4 9.2 219 21-270 111-371 (374)
424 3f6t_A Aspartate aminotransfer 95.8 0.063 2.2E-06 61.2 13.3 73 20-100 202-287 (533)
425 3dxv_A Alpha-amino-epsilon-cap 95.7 0.13 4.6E-06 56.3 15.4 216 39-270 170-425 (439)
426 1yaa_A Aspartate aminotransfer 95.7 0.019 6.6E-07 62.4 8.2 213 20-269 133-410 (412)
427 1n8p_A Cystathionine gamma-lya 95.6 0.025 8.5E-07 61.8 8.7 131 27-180 113-280 (393)
428 3ht4_A Aluminum resistance pro 95.6 0.019 6.6E-07 63.9 7.7 62 31-100 138-210 (431)
429 3hvy_A Cystathionine beta-lyas 95.6 0.044 1.5E-06 61.0 10.6 155 26-193 143-339 (427)
430 3nx3_A Acoat, acetylornithine 95.3 0.13 4.5E-06 55.4 13.2 109 137-268 281-393 (395)
431 3n75_A LDC, lysine decarboxyla 95.2 0.23 8E-06 58.7 15.8 241 20-272 244-562 (715)
432 2oat_A Ornithine aminotransfer 95.2 0.083 2.8E-06 58.5 11.3 104 141-268 332-437 (439)
433 2q7w_A Aspartate aminotransfer 95.0 0.014 4.7E-07 63.0 4.1 210 20-266 129-395 (396)
434 1z7d_A Ornithine aminotransfer 94.9 0.39 1.3E-05 52.9 15.7 105 141-270 321-429 (433)
435 2cjg_A L-lysine-epsilon aminot 94.9 0.87 3E-05 50.3 18.5 203 37-270 194-448 (449)
436 3a8u_X Omega-amino acid--pyruv 94.7 0.47 1.6E-05 52.1 15.8 106 143-269 339-446 (449)
437 1zod_A DGD, 2,2-dialkylglycine 94.6 0.49 1.7E-05 51.6 15.5 103 157-270 326-432 (433)
438 3meb_A Aspartate aminotransfer 94.6 0.11 3.7E-06 57.6 10.2 73 21-99 155-243 (448)
439 3l44_A Glutamate-1-semialdehyd 94.5 0.41 1.4E-05 52.3 14.4 203 50-272 188-432 (434)
440 1s0a_A Adenosylmethionine-8-am 94.4 0.44 1.5E-05 51.9 14.5 199 37-267 171-421 (429)
441 4eu1_A Mitochondrial aspartate 94.3 0.041 1.4E-06 59.8 6.0 74 20-99 140-224 (409)
442 3asa_A LL-diaminopimelate amin 94.3 0.15 5E-06 55.2 10.3 96 154-269 294-392 (400)
443 2fq6_A Cystathionine beta-lyas 94.3 0.13 4.4E-06 56.8 9.9 138 28-181 142-306 (415)
444 1ohv_A 4-aminobutyrate aminotr 93.9 0.93 3.2E-05 50.6 16.0 195 49-269 240-470 (472)
445 7aat_A Aspartate aminotransfer 93.8 0.071 2.4E-06 57.5 6.5 75 20-99 132-216 (401)
446 3gju_A Putative aminotransfera 93.4 4.4 0.00015 44.6 20.4 126 136-272 329-458 (460)
447 3hmu_A Aminotransferase, class 93.2 1.4 4.7E-05 49.2 15.9 122 136-272 326-454 (472)
448 3dod_A Adenosylmethionine-8-am 93.1 0.99 3.4E-05 49.6 14.4 51 216-272 395-445 (448)
449 3i4j_A Aminotransferase, class 92.7 0.88 3E-05 49.5 13.1 217 37-270 159-428 (430)
450 3n5m_A Adenosylmethionine-8-am 92.6 3.8 0.00013 44.9 18.2 52 216-268 397-450 (452)
451 3ou5_A Serine hydroxymethyltra 91.8 3.2 0.00011 46.4 16.0 206 39-268 179-439 (490)
452 3tfu_A Adenosylmethionine-8-am 91.2 1 3.5E-05 50.0 11.6 108 136-270 340-453 (457)
453 3oks_A 4-aminobutyrate transam 91.1 5.6 0.00019 43.7 17.5 116 136-268 327-449 (451)
454 3k28_A Glutamate-1-semialdehyd 90.9 0.41 1.4E-05 52.3 7.9 202 50-269 186-426 (429)
455 2epj_A Glutamate-1-semialdehyd 89.8 3.3 0.00011 45.0 14.0 212 37-270 181-431 (434)
456 2hox_A ALLIIN lyase 1; cystein 89.4 1.6 5.4E-05 48.0 11.1 90 156-267 317-422 (427)
457 4ffc_A 4-aminobutyrate aminotr 88.7 11 0.00038 41.3 17.5 54 215-271 397-450 (453)
458 3fq8_A Glutamate-1-semialdehyd 88.3 3.7 0.00013 44.4 13.0 201 50-269 185-426 (427)
459 2cy8_A D-phgat, D-phenylglycin 88.1 8.2 0.00028 42.1 15.8 113 143-273 315-438 (453)
460 4a6r_A Omega transaminase; tra 87.7 8 0.00028 42.4 15.5 53 214-272 399-451 (459)
461 4e77_A Glutamate-1-semialdehyd 84.4 5.8 0.0002 42.9 12.0 46 216-268 382-427 (429)
462 2e7u_A Glutamate-1-semialdehyd 77.2 30 0.001 37.1 14.5 101 155-266 320-423 (424)
463 3i5t_A Aminotransferase; pyrid 75.5 23 0.0008 39.1 13.3 123 136-274 330-458 (476)
464 3bwn_A AT1G70560, L-tryptophan 71.1 9.5 0.00032 40.9 8.4 92 153-267 279-384 (391)
465 2zy4_A L-aspartate beta-decarb 63.5 52 0.0018 37.1 13.0 56 218-275 471-527 (546)
466 1t1v_A SH3BGRL3, SH3 domain-bi 54.3 41 0.0014 28.0 7.7 69 631-707 3-81 (93)
467 3h8q_A Thioredoxin reductase 3 50.4 58 0.002 28.3 8.3 74 630-708 17-92 (114)
468 3l21_A DHDPS, dihydrodipicolin 48.9 14 0.00048 38.8 4.6 70 650-719 16-89 (304)
469 3dz1_A Dihydrodipicolinate syn 47.9 15 0.0005 38.8 4.5 62 658-719 18-81 (313)
470 3fkr_A L-2-keto-3-deoxyarabona 47.7 12 0.0004 39.5 3.7 61 658-718 18-81 (309)
471 2wkj_A N-acetylneuraminate lya 45.8 17 0.00058 38.1 4.6 62 658-719 21-85 (303)
472 3s5o_A 4-hydroxy-2-oxoglutarat 44.6 14 0.00049 38.7 3.8 62 658-719 24-88 (307)
473 3flu_A DHDPS, dihydrodipicolin 44.2 13 0.00044 38.9 3.4 62 658-719 17-81 (297)
474 4h51_A Aspartate aminotransfer 43.9 66 0.0023 35.1 9.2 57 27-87 153-211 (420)
475 3b4u_A Dihydrodipicolinate syn 43.5 15 0.00051 38.4 3.7 55 659-713 14-68 (294)
476 1f6k_A N-acetylneuraminate lya 43.4 14 0.00048 38.5 3.5 60 659-718 14-77 (293)
477 2nuw_A 2-keto-3-deoxygluconate 43.3 13 0.00043 38.8 3.1 55 659-713 10-64 (288)
478 1fov_A Glutaredoxin 3, GRX3; a 43.2 61 0.0021 25.6 6.8 67 631-705 2-70 (82)
479 3na8_A Putative dihydrodipicol 42.8 12 0.00041 39.5 2.9 62 658-719 34-98 (315)
480 3cpr_A Dihydrodipicolinate syn 42.6 15 0.00051 38.5 3.6 61 658-718 26-89 (304)
481 2r8w_A AGR_C_1641P; APC7498, d 41.7 18 0.00063 38.4 4.2 62 658-719 44-108 (332)
482 3tak_A DHDPS, dihydrodipicolin 41.7 13 0.00045 38.7 3.0 61 659-719 12-75 (291)
483 1w3i_A EDA, 2-keto-3-deoxy glu 41.7 16 0.00053 38.2 3.5 55 659-713 10-64 (293)
484 4dpp_A DHDPS 2, dihydrodipicol 41.5 21 0.00072 38.5 4.6 62 658-719 69-133 (360)
485 2ojp_A DHDPS, dihydrodipicolin 41.3 14 0.00047 38.6 3.0 54 659-712 12-65 (292)
486 3si9_A DHDPS, dihydrodipicolin 41.2 13 0.00044 39.3 2.8 62 658-719 32-96 (315)
487 1xky_A Dihydrodipicolinate syn 41.1 15 0.00052 38.4 3.4 60 659-718 23-85 (301)
488 3qze_A DHDPS, dihydrodipicolin 41.0 14 0.00048 39.0 3.1 62 658-719 33-97 (314)
489 2hmc_A AGR_L_411P, dihydrodipi 39.8 24 0.00084 37.7 4.7 61 658-718 36-96 (344)
490 2v9d_A YAGE; dihydrodipicolini 39.4 18 0.00061 38.7 3.6 61 658-718 41-104 (343)
491 3h5d_A DHDPS, dihydrodipicolin 38.4 14 0.00048 38.9 2.5 62 658-719 17-81 (311)
492 3eb2_A Putative dihydrodipicol 37.4 13 0.00045 38.9 2.1 55 658-712 14-68 (300)
493 3e96_A Dihydrodipicolinate syn 36.9 18 0.00061 38.2 3.0 62 658-719 21-86 (316)
494 3a5f_A Dihydrodipicolinate syn 35.9 20 0.0007 37.2 3.3 53 659-712 13-65 (291)
495 1wik_A Thioredoxin-like protei 35.4 1.3E+02 0.0044 25.7 8.1 70 630-707 15-91 (109)
496 3qfe_A Putative dihydrodipicol 35.1 17 0.00058 38.4 2.6 61 659-719 21-85 (318)
497 2ct6_A SH3 domain-binding glut 34.9 88 0.003 27.1 6.9 68 631-706 9-92 (111)
498 3fkr_A L-2-keto-3-deoxyarabona 34.8 27 0.00093 36.7 4.1 49 41-89 18-67 (309)
499 2pcq_A Putative dihydrodipicol 34.5 16 0.00054 37.9 2.1 58 659-718 9-66 (283)
500 3qmx_A Glutaredoxin A, glutare 34.3 1.8E+02 0.0062 24.5 8.7 71 629-707 15-88 (99)
No 1
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.3e-56 Score=504.69 Aligned_cols=319 Identities=50% Similarity=0.969 Sum_probs=295.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhHhhcCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCcc
Q psy13453 446 PVTPPPNEEFREFGKAAIDFIADYVDNIRERPVLPSVEPGYLASLVPGEMPEEGEDWRHIMRDMNTVIMPGITHWQSPQF 525 (764)
Q Consensus 446 ~~~~~~~~~~~~~~~~~v~~i~~y~~~~~~~~v~~~~~p~~l~~~l~~~lP~~g~~~~~il~~l~~~i~~~~~~~~~P~~ 525 (764)
++.+||.++||+++++++|.+++|+++++++||.+.++|+++++.++..+|++|.+++++++++.+.+.++.++|+||+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 81 (481)
T 4e1o_A 2 PLGSMEPEEYRERGREMVDYICQYLSTVRERRVTPDVQPGYLRAQLPESAPEDPDSWDSIFGDIERIIMPGVVHWQSPHM 81 (481)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHHHHSGGGSCSSCCCCTTTTGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTSTTB
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCe
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccC-CCCCCCcEEEeCChHHHHHHH
Q psy13453 526 NAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLN-CSPGPGGGIIQSTASEATLVS 604 (764)
Q Consensus 526 ~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~-~~~~~~~GvfTsGgTeANl~A 604 (764)
|+|++++.++++++++++.+++|+|...|..+|.++++|+++++|+++++|+|.++.. ...+.++|+||+|||+||++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~a 161 (481)
T 4e1o_A 82 HAYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIA 161 (481)
T ss_dssp CSSSCCCCCHHHHHHHHHHHHHCCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHH
T ss_pred eEeCCCCCCHHHHHHHHHHHHhCcccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999986532 122346899999999999999
Q ss_pred HHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCC
Q psy13453 605 ILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLI 684 (764)
Q Consensus 605 l~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~ 684 (764)
+++||++..++.+..++++.+.+..++.+||+|+.+|+|+.|++++.|.+++.||+|++|+||+++|+++|+++.++|..
T Consensus 162 l~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~ 241 (481)
T 4e1o_A 162 LLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLV 241 (481)
T ss_dssp HHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCC
Confidence 99999988776544445454445567889999999999999999999999999999999999999999999999889999
Q ss_pred ceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 685 PCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 685 p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
|++|++|+|||.+|++|||++|+++|++||+|+|||||||+++++++++++.+.|+++|||+++|+|||+++|++||++|
T Consensus 242 ~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~ 321 (481)
T 4e1o_A 242 PVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFW 321 (481)
T ss_dssp EEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred cEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999975
No 2
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=100.00 E-value=8.6e-56 Score=503.66 Aligned_cols=314 Identities=57% Similarity=1.065 Sum_probs=292.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhHhhcCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCcccccc
Q psy13453 450 PPNEEFREFGKAAIDFIADYVDNIRERPVLPSVEPGYLASLVPGEMPEEGEDWRHIMRDMNTVIMPGITHWQSPQFNAYF 529 (764)
Q Consensus 450 ~~~~~~~~~~~~~v~~i~~y~~~~~~~~v~~~~~p~~l~~~l~~~lP~~g~~~~~il~~l~~~i~~~~~~~~~P~~~~~~ 529 (764)
||+++||+++++++|.+++|+++++++||.+.++|++|++.++.++|++|++++++++++.+.+.++.++|+||+||+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (475)
T 3k40_A 1 MEAPEFKDFAKTMVDFIAEYLENIRERRVLPEVKPGYLKPLIPDAAPEKPEKWQDVMQDIERVIMPGVTHWHSPKFHAYF 80 (475)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCSSCTTCSGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTCTTBCCSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCCCCCCcCceeeC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHH
Q psy13453 530 PTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAK 609 (764)
Q Consensus 530 ~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR 609 (764)
+++.++++++++++.+.+|+|...|..+|.+++||+++++|+++++|+|.+|.....+.++|+||+|||+||++|+++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar 160 (475)
T 3k40_A 81 PTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAK 160 (475)
T ss_dssp CCCCCHHHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998764433445689999999999999999999
Q ss_pred HHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEE
Q psy13453 610 RKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLI 689 (764)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~Vv 689 (764)
+++.++.+..++++.+.+..++.+||+|+.+|+|+.|+++++|++++.||+|++| ||+++|+++|+++.++|..|++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~~~~~~~v~ 239 (475)
T 3k40_A 161 AKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSENHR-MRGAALEKAIEQDVAEGLIPFYAV 239 (475)
T ss_dssp HHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECCBTTB-CCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEECCCCC-cCHHHHHHHHHHHHHCCCccEEEE
Confidence 9877654433444444445567899999999999999999999999999999999 999999999999988899999999
Q ss_pred EeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 690 ATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 690 ataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+|+|||.+|.+|||++|+++|++||+|+|||||||++++++++++..+.|++++||+++|+|||+++|++||++|
T Consensus 240 ~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~ 314 (475)
T 3k40_A 240 VTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMW 314 (475)
T ss_dssp EEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred EEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999875
No 3
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=100.00 E-value=9.5e-50 Score=457.94 Aligned_cols=319 Identities=27% Similarity=0.428 Sum_probs=289.4
Q ss_pred CcchhhhhhhhhhhcccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCChhhHhhc---CCCCCC
Q psy13453 422 SENLITLIIASDLIINSIPLTKASPVTPPPNEEFREFGKAAIDFIADYVDNIRER--PVLPSVEPGYLASL---VPGEMP 496 (764)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~y~~~~~~~--~v~~~~~p~~l~~~---l~~~lP 496 (764)
.+++|+++++.+++ |.. .+.+++++++++++|.+++|++++.++ +|.++..|+++++. ++.++|
T Consensus 2 ~~~~~~~~~~~~~~----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p 70 (511)
T 3vp6_A 2 TETDFSNLFARDLL----PAK-------NGEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELS 70 (511)
T ss_dssp --CCCTTCCGGGST----TST-------TCHHHHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHHCBTTBCCCCC
T ss_pred cccchhhhcccccC----CCC-------CChHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHhhCCCCCC
Confidence 45889999999998 532 468899999999999999999998665 57888999999999 899999
Q ss_pred CCCCCHHHHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcC
Q psy13453 497 EEGEDWRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALG 576 (764)
Q Consensus 497 ~~g~~~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG 576 (764)
++|++.+++++++.+.+.++. +|+||+||+|++++.++++++++++.+.+|++...|..+|.++++|+++++|+++++|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~-~~~~p~f~~~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g 149 (511)
T 3vp6_A 71 DHPESLEQILVDCRDTLKYGV-RTGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVG 149 (511)
T ss_dssp SSCCCHHHHHHHHHHHHHTSC-CTTSTTEESSSSCCCCHHHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHhhccC-CCCCCCceEeecCCCcHHHHHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhC
Confidence 999999999999999888775 4899999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCC---
Q psy13453 577 LPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDV--- 653 (764)
Q Consensus 577 ~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl--- 653 (764)
++.+ ..+|+||+|||+||++|+.++|+++.+..+.+| + ...++.+||+|+.+|+|+.++++++|+
T Consensus 150 ~~~~-------~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G--~---~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~ 217 (511)
T 3vp6_A 150 WSSK-------DGDGIFSPGGAISNMYSIMAARYKYFPEVKTKG--M---AAVPKLVLFTSEQSHYSIKKAGAALGFGTD 217 (511)
T ss_dssp CCSS-------SCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHC--G---GGSCCEEEEEETTSCTHHHHHHHHTTSCGG
T ss_pred CCCC-------CCceEECCchHHHHHHHHHHHHHHhhhhhhhcC--c---ccCCCeEEEECCCchHHHHHHHHHcCCCCC
Confidence 9852 257999999999999999999997654322221 1 112467899999999999999999998
Q ss_pred ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchh
Q psy13453 654 PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEY 733 (764)
Q Consensus 654 ~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~ 733 (764)
+++.||+|++|+||+++|+++|+++.++|..|++|++++|+|.+|.+|||++|+++|++||+|+|||+|||+++++++++
T Consensus 218 ~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~ 297 (511)
T 3vp6_A 218 NVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKH 297 (511)
T ss_dssp GEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTT
T ss_pred cEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHhhChhh
Confidence 89999999999999999999999998999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 734 AHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 734 r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+..+.|+++|||+++|+|||+++|++||+++
T Consensus 298 ~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~ 328 (511)
T 3vp6_A 298 RHKLNGIERANSVTWNPHKMMGVLLQCSAIL 328 (511)
T ss_dssp GGGGTTGGGCSEEEECTTSTTCCCSCCEEEE
T ss_pred hhhccCCccCCEEEECcccccCCCcCeEEEE
Confidence 9999999999999999999999999999875
No 4
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=100.00 E-value=2.7e-50 Score=458.08 Aligned_cols=315 Identities=55% Similarity=1.022 Sum_probs=283.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhHhhcCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCcccccc
Q psy13453 450 PPNEEFREFGKAAIDFIADYVDNIRERPVLPSVEPGYLASLVPGEMPEEGEDWRHIMRDMNTVIMPGITHWQSPQFNAYF 529 (764)
Q Consensus 450 ~~~~~~~~~~~~~v~~i~~y~~~~~~~~v~~~~~p~~l~~~l~~~lP~~g~~~~~il~~l~~~i~~~~~~~~~P~~~~~~ 529 (764)
||.++||+++++++|.+++|++++.++||.+..+|+++++.++.++|++|++.+++++++.+.+.++.++|+||+|++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (486)
T 1js3_A 1 MNASDFRRRGKEMVDYMADYLEGIEGRQVYPDVQPGYLRPLIPATAPQEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYF 80 (486)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCCCCTTCSGGGSCSSCCSSCCCHHHHHHHHHHTTGGGCCCTTSTTBCSSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCceEeC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHH
Q psy13453 530 PTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAK 609 (764)
Q Consensus 530 ~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR 609 (764)
++++++++.+++++..++|++...|..+|..+++|+++++|+++++|++.+|.....+.++|+||+|||+||++|+.++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~ 160 (486)
T 1js3_A 81 PTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAAR 160 (486)
T ss_dssp CCCCCHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987543212223579999999999999999999
Q ss_pred HHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEE
Q psy13453 610 RKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLI 689 (764)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~Vv 689 (764)
++..++.+..+.++.+.+..++.+||+|+.+|+|+.++++++|++++.||+|++|+||+++|+++|++++++|..|++|+
T Consensus 161 ~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv 240 (486)
T 1js3_A 161 TKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVV 240 (486)
T ss_dssp HHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEE
Confidence 86544221110011111112356799999999999999999999999999999999999999999999999999999999
Q ss_pred EeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 690 ATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 690 ataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+|+|||.+|++|||++|+++|++||+|+|||+|||++.+.++++++.+.|++.+||+++|+|||+++|++||+++
T Consensus 241 ~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~ 315 (486)
T 1js3_A 241 ATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMW 315 (486)
T ss_dssp EEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEE
Confidence 999999999999999999999999999999999999999999899888899999999999999999999999874
No 5
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=100.00 E-value=6e-48 Score=441.21 Aligned_cols=316 Identities=27% Similarity=0.425 Sum_probs=284.3
Q ss_pred hhhhhhhhhhhcccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCChhhHhhc---CCCCCCCCC
Q psy13453 425 LITLIIASDLIINSIPLTKASPVTPPPNEEFREFGKAAIDFIADYVDNIRER--PVLPSVEPGYLASL---VPGEMPEEG 499 (764)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~y~~~~~~~--~v~~~~~p~~l~~~---l~~~lP~~g 499 (764)
+|++++++|+| |. . |+.++|++++++++|.+++|++++.++ +|.+.+.|+++++. ++.++|++|
T Consensus 2 ~~~~~~~~~~~----~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p~~~ 70 (504)
T 2okj_A 2 DFSNLFARDLL----PA------K-NGEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHP 70 (504)
T ss_dssp TTTTCCGGGST----TS------T-TCHHHHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHSCBTTBCCCCCSSC
T ss_pred cchhhhhcccc----CC------C-CCHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHhhccCCCCCCCC
Confidence 67889999998 64 2 899999999999999999999997765 49999999999999 999999999
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCc
Q psy13453 500 EDWRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPE 579 (764)
Q Consensus 500 ~~~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~ 579 (764)
++.+++++++++.+.++.. +.||+||+|++++..+.+++++++.+++|+|...|..+|..+++|+++++|+++++|++.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~ 149 (504)
T 2okj_A 71 ESLEQILVDCRDTLKYGVR-TGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSS 149 (504)
T ss_dssp CCHHHHHHHHHHHHHTSCC-TTCTTEESSSSCCCCHHHHHHHHHHHHHCCBSSCTTTCHHHHHHHHHHHHHHHHHHTCCS
T ss_pred CCHHHHHHHHHHHhhccCC-CCCCCEEEEccCCCCHHHHHHHHHHHhhccCCCchhhChHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999998777665 569999999999999999999999999999999999999999999999999999999983
Q ss_pred cccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCC---ceE
Q psy13453 580 EFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDV---PVR 656 (764)
Q Consensus 580 ~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl---~v~ 656 (764)
+ ..+|+||+|||+||++|+.++|++..+..+..| . ...++.+|++|+.+|+|+.|+++++|+ +++
T Consensus 150 ~-------~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G--~---~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~ 217 (504)
T 2okj_A 150 K-------DGDGIFSPGGAISNMYSIMAARYKYFPEVKTKG--M---AAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVI 217 (504)
T ss_dssp S-------SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHC--G---GGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEE
T ss_pred C-------CCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcC--c---cccCCeEEEECCcchHHHHHHHHHcCCCcccEE
Confidence 1 157999999999999999999986543221111 0 001255899999999999999999887 899
Q ss_pred EEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhh
Q psy13453 657 QLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHL 736 (764)
Q Consensus 657 ~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~ 736 (764)
.||+|++|+||+++|+++|+++.++|..|++|++++|||.+|++||+++|+++|++||+|+|||+||+++.+.+++++..
T Consensus 218 ~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~ 297 (504)
T 2okj_A 218 LIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHK 297 (504)
T ss_dssp EECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGG
T ss_pred EEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhh
Confidence 99999999999999999999988888889999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 737 KRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 737 l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+.|++.+||+++|+|||+++|++||+++
T Consensus 298 ~~g~~~~D~i~~~~hK~~~~p~~~g~l~ 325 (504)
T 2okj_A 298 LNGIERANSVTWNPHKMMGVLLQCSAIL 325 (504)
T ss_dssp GTTGGGCSEEEECTTSTTCCCSCCEEEE
T ss_pred cCCcccCCEEEECchhhcCCCcceEEEE
Confidence 9999999999999999999999999985
No 6
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=100.00 E-value=3.1e-47 Score=436.78 Aligned_cols=319 Identities=25% Similarity=0.383 Sum_probs=275.9
Q ss_pred CCcchhhhhhhhhhhcccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHHhcCC--CCCCCCCChhhHhhcCCCCCCC
Q psy13453 421 HSENLITLIIASDLIINSIPLTKASPVTPPPNEEFREFGKAAIDFIAD-YVDNIRE--RPVLPSVEPGYLASLVPGEMPE 497 (764)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~-y~~~~~~--~~v~~~~~p~~l~~~l~~~lP~ 497 (764)
+.+.+|++++++|++ |. .+||.++|++++++++|.+++ |+++..+ +||.+...|++++..++..+|+
T Consensus 15 ~~~~~~~~~~~~~~~----~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~~~~~p~ 84 (515)
T 2jis_A 15 TENLYFQSMADSEAL----PS------LAGDPVAVEALLRAVFGVVVDEAIQKGTSVSQKVCEWKEPEELKQLLDLELRS 84 (515)
T ss_dssp --------------C----CC------CSCCHHHHHHHHHHHHHHHHHHTTTGGGCTTSCSCCCCCHHHHHHHHCCCCCS
T ss_pred cccccchhhhhcccc----CC------CCCCHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCHHHHHhhcccCCCC
Confidence 566889999999998 54 458999999999999999999 9988765 4899999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCC
Q psy13453 498 EGEDWRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGL 577 (764)
Q Consensus 498 ~g~~~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~ 577 (764)
+|++.+++++++++.+.++.. +.||+|++|++++..+.+++++++..++|++...|..+|.++++|.++++|+++++|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~ 163 (515)
T 2jis_A 85 QGESQKQILERCRAVIRYSVK-TGHPRFFNQLFSGLDPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGW 163 (515)
T ss_dssp SCCCHHHHHHHHHHHHHHSCC-TTSTTEESSSCCCCCHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHhcCCCC-CCCCCeEEEeeCCCCHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCC
Confidence 999999999999998777665 5699999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCC---c
Q psy13453 578 PEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDV---P 654 (764)
Q Consensus 578 p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl---~ 654 (764)
+. .+++||+|||+||++|+.++|++..+..+..| . ...++++|++|+.+|+|+.++++++|+ +
T Consensus 164 ~~---------~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G--~---~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~ 229 (515)
T 2jis_A 164 SS---------GDGIFCPGGSISNMYAVNLARYQRYPDCKQRG--L---RTLPPLALFTSKECHYSIQKGAAFLGLGTDS 229 (515)
T ss_dssp SS---------CEEEEESSHHHHHHHHHHHHHHHHCTTHHHHC--G---GGSCCEEEEEETTSCTHHHHHHHHTTSCGGG
T ss_pred CC---------CCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcC--c---cccCCeEEEECCCccHHHHHHHHHcCCCCCc
Confidence 74 47999999999999999999986543211110 0 012356899999999999999999988 8
Q ss_pred eEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhh
Q psy13453 655 VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYA 734 (764)
Q Consensus 655 v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r 734 (764)
++.||+|++|+||+++|+++|+++.++|..|.+|++++|||.+|.+||+++|+++|++||+|+|||+||+++.+.+++++
T Consensus 230 v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~ 309 (515)
T 2jis_A 230 VRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHR 309 (515)
T ss_dssp EEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTG
T ss_pred EEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhhH
Confidence 99999999999999999999999888888899999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 735 HLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 735 ~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+.+.|++.+||+++|+|||+++|++||+++
T Consensus 310 ~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~ 339 (515)
T 2jis_A 310 HLLDGIQRADSVAWNPHKLLAAGLQCSALL 339 (515)
T ss_dssp GGGTTGGGCSEEEECTTSTTCCCSCCEEEE
T ss_pred hhcCCCccCCEEEECcccccCCCCCeeEEE
Confidence 889999999999999999999999999875
No 7
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.7e-44 Score=412.00 Aligned_cols=304 Identities=21% Similarity=0.369 Sum_probs=270.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhHhhcCCC-CCCCCCCCHHHHHHHHHHHHcCCCCCCCCCccc
Q psy13453 448 TPPPNEEFREFGKAAIDFIADYVDNIRERPVLPSVEPGYLASLVPG-EMPEEGEDWRHIMRDMNTVIMPGITHWQSPQFN 526 (764)
Q Consensus 448 ~~~~~~~~~~~~~~~v~~i~~y~~~~~~~~v~~~~~p~~l~~~l~~-~lP~~g~~~~~il~~l~~~i~~~~~~~~~P~~~ 526 (764)
..++.++||+.+++++|.+++|+++. . ++.+...|+++++.++. .+|++|++++++++++.+.+.++.++|+||+||
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 104 (497)
T 2qma_A 27 GELGSAEFASVMSHTTSAMKSVFEQV-N-APYSGMDPKALEDAINAVDLDNKNAPLKSVIDDVAELVAKNAIFTQHPDCI 104 (497)
T ss_dssp STTTTHHHHHHHHHHHHHHHHHHHHC-C-SSSCCCCHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHTTTTSCCTTSTTBC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhc-c-CCCCCCCHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCee
Confidence 35788999999999999999999987 3 44778899999999886 589999999999999999999999999999999
Q ss_pred cccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHH
Q psy13453 527 AYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSIL 606 (764)
Q Consensus 527 ~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~ 606 (764)
+|+.++..+++++++++...+|++...|..+|.++++|+++++|+++++|+++. ..++||+|||+||++++.
T Consensus 105 ~~~~~~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~--------~~~~~t~ggt~a~~~al~ 176 (497)
T 2qma_A 105 AHLHTPPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEK--------ADGIFTSGGTQSNQMGLM 176 (497)
T ss_dssp SSSCCCCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTT--------CEEEEESSHHHHHHHHHH
T ss_pred EeCCCCCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCC--------CCeEEcCCchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999752 479999999999999999
Q ss_pred HHHHHHhhhhccCCCCCccccc---cCceEEEecCCcchhHHHHHHhCCC---ceEEEecCCCCcccHHHHHHHHHHhhh
Q psy13453 607 VAKRKMINHWQSKNPSLTENDI---RNKLVAYTSDQSNSSVEKSAIIGDV---PVRQLRSDDNGVLRGDALLTAVKEDLA 680 (764)
Q Consensus 607 aAR~~~~~~~~~~~~~~~~~~~---~~~~vi~~S~~aH~Sv~kAa~~lGl---~v~~Vp~d~~g~md~~~Le~~I~~~~~ 680 (764)
+||+++..+... ++....+. .++.+|++|+.+|+|+.+++.++|+ +++.||+|++++||+++|+++|+++.+
T Consensus 177 ~ar~~~~~~~~~--~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~ 254 (497)
T 2qma_A 177 LARDWIADKLSG--HSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANADGTMDITKLDEVIAQAKA 254 (497)
T ss_dssp HHHHHHHHHHHC--CCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSSBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHhhcc--cchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCCCCcCCHHHHHHHHHHHHH
Confidence 998865421100 00000011 1255899999999999999999987 799999999999999999999998888
Q ss_pred cCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCc
Q psy13453 681 KGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDC 760 (764)
Q Consensus 681 ~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~ 760 (764)
+|.+|++|++|.|+|.+|.+|||++|+++|++||+|+|||+||+++...++ +++.+.|++++||+++|+|||+++|++|
T Consensus 255 ~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~~D~i~~s~hK~l~~p~~~ 333 (497)
T 2qma_A 255 EGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVERAHSISVDFHKLFYQTISC 333 (497)
T ss_dssp TTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGGGCSEEEEETTTTTCCCSSC
T ss_pred CCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcccCCEEEEcchhccCCCcce
Confidence 888899999999999999999999999999999999999999999988887 7888889999999999999999999999
Q ss_pred eeeC
Q psy13453 761 SAMW 764 (764)
Q Consensus 761 g~l~ 764 (764)
|+++
T Consensus 334 G~l~ 337 (497)
T 2qma_A 334 GALL 337 (497)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
No 8
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=100.00 E-value=3.8e-33 Score=314.10 Aligned_cols=258 Identities=16% Similarity=0.163 Sum_probs=208.3
Q ss_pred hhhHhhcCCCCCCCCCCCHHHHHHHHHHHH-cCCCCCCCCCccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHH
Q psy13453 484 PGYLASLVPGEMPEEGEDWRHIMRDMNTVI-MPGITHWQSPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTE 562 (764)
Q Consensus 484 p~~l~~~l~~~lP~~g~~~~~il~~l~~~i-~~~~~~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~ 562 (764)
...+++.++.++|++|++.+++++++.+.+ .++..+++||+|++.. .. ..+.+++..++|.+...|..+|.+.+
T Consensus 7 ~~~~~~~~~~~lp~~g~~~~~v~~~~~~~~~~~~~~~~~~~~f~~~~---~~--~~v~e~~~~a~~~~~~~~~~~~~~~~ 81 (452)
T 2dgk_A 7 KSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTW---DD--ENVHKLMDLSINKNWIDKEEYPQSAA 81 (452)
T ss_dssp --------CCSCCCSCCCHHHHHHHHHHHGGGSCCCTTBCSCCSCCC---CC--HHHHHHHHHTTTCBTTCTTTCHHHHH
T ss_pred hHHhhhccCCCCCCCCCCHHHHHHHHHHHhcCCCCCccCCCCeeCCC---ch--HHHHHHHHHHhccCCCChhhChhHHH
Confidence 344566677899999999999999999988 6888889999998721 11 45789999999999889999999999
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
+|+++++|+++++|++.+.. +...++||+|||+||++++.++++++.++.+..| .. ..+..|++|+ +|+
T Consensus 82 l~~~~~~~la~l~g~~~~~~----~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G--~~----~~~~~vi~~~-~h~ 150 (452)
T 2dgk_A 82 IDLRCVNMVADLWHAPAPKN----GQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAG--KP----TDKPNLVCGP-VQI 150 (452)
T ss_dssp HHHHHHHHHHHHTTCCCCTT----SCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTT--CC----CSCCEEEESS-CCH
T ss_pred HHHHHHHHHHHHhCCCcccc----cCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcC--CC----CCCcEEEECC-CcH
Confidence 99999999999999986410 0135899999999999999999876543222111 00 0123677888 999
Q ss_pred hHHHHHHhCCCceEEEecCC-CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc------CC
Q psy13453 643 SVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY------NI 715 (764)
Q Consensus 643 Sv~kAa~~lGl~v~~Vp~d~-~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~------gl 715 (764)
++.++++++|++++.||+++ +++||+++|+++|+++ |.+|+++.|+|.+|.+||+++|+++|++| |+
T Consensus 151 ~~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~ 224 (452)
T 2dgk_A 151 CWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDEN------TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDI 224 (452)
T ss_dssp HHHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCCTT------EEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHcCceEEEEecCCCCCeECHHHHHHHHhhC------CEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCC
Confidence 99999999999999999986 7999999999999653 67999999999999999999999999996 99
Q ss_pred EEEEecccccccc--ccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 716 WLHVDAAYAGSAL--LLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 716 wLHVDaA~Gg~~l--~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
|+|||+||++++. +.++.+..++ ++.+||+++|+|||+++|++||+++
T Consensus 225 ~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~hK~~~~~~~~G~~~ 274 (452)
T 2dgk_A 225 DMHIDAASGGFLAPFVAPDIVWDFR-LPRVKSISASGHKFGLAPLGCGWVI 274 (452)
T ss_dssp CEEEECTTGGGTHHHHCTTCCCSTT-STTEEEEEEETTTTTCCCSSCEEEE
T ss_pred cEEEEcccHHHHHHhhCccchhhcC-CCCCcEEEECcccccCCCCCeEEEE
Confidence 9999999999865 3444333333 6678999999999999999999874
No 9
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=100.00 E-value=1.7e-32 Score=311.93 Aligned_cols=244 Identities=33% Similarity=0.470 Sum_probs=206.8
Q ss_pred cccc-ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccC
Q psy13453 7 IPKL-AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQS 84 (764)
Q Consensus 7 ~~~~-~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDp 84 (764)
.|++ +|+|+. .|||+.|+++++|+.. +.||+|+++ ||+++|+++|++++++|..|++ |+|+|||++|++||
T Consensus 180 ~~~~~vi~s~~---~H~s~~~~~~~~g~~~---~~v~~d~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~ 252 (475)
T 3k40_A 180 LGKLVGYCSDQ---AHSSVERAGLLGGVKL---RSVQSENHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDY 252 (475)
T ss_dssp HHHEEEEEETT---SCHHHHHHHHHHTCEE---EEECCBTTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC
T ss_pred cCCeEEEECCC---chHHHHHHHHHcCCce---EEEECCCCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCC
Confidence 4666 889998 8999999999999865 999999999 9999999999999888888887 69999999999999
Q ss_pred chhhhc-----CCCceecccc-------------------------------cccc-ceeeeecCCCcccccccc-----
Q psy13453 85 LNAPVS-----NGPLKVGGVL-------------------------------RRVY-SSCLVPRGQKSLRTTVLF----- 122 (764)
Q Consensus 85 i~~ia~-----~~wlHVDa~l-------------------------------~~~y-~s~ll~rd~~~l~~~~s~----- 122 (764)
|++|++ ++|+||||+. ..++ |++++++++..+..++..
T Consensus 253 l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl 332 (475)
T 3k40_A 253 LDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYL 332 (475)
T ss_dssp HHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGGGC-----------
T ss_pred HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCCcccc
Confidence 999887 9999999942 1122 357888887665433221
Q ss_pred -------ccccCCcccCCCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeec
Q psy13453 123 -------HFLFQHWQIPLGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKV 195 (764)
Q Consensus 123 -------~~d~~d~tle~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P 195 (764)
.+++.+|++++||+++++++|++|+++|.+||++++++..++|+++++.|+++|+|+++.+|.+++|||++.+
T Consensus 333 ~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~ 412 (475)
T 3k40_A 333 KHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKG 412 (475)
T ss_dssp ----------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESS
T ss_pred CCCcCCCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCC
Confidence 1467889999999999999999999999999999999999999999999999999999999999999999852
Q ss_pred cccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHcc
Q psy13453 196 RFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLRG 273 (764)
Q Consensus 196 ~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~~ 273 (764)
.+..+.++.++|+++|+++++.+.++|..++|+|++|++|+++||+.+++.|+++++++.++
T Consensus 413 ----------------~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~~~~ 474 (475)
T 3k40_A 413 ----------------SNERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSAAADEMEQE 474 (475)
T ss_dssp ----------------CHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred ----------------chHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 24467899999999999999999999999999999999999999999999999999888653
No 10
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-32 Score=311.18 Aligned_cols=244 Identities=30% Similarity=0.422 Sum_probs=214.4
Q ss_pred cccc-ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccC
Q psy13453 7 IPKL-AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQS 84 (764)
Q Consensus 7 ~~~~-~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDp 84 (764)
.|++ +|+|+. .|||+.|++++.|... +.||+|++++||+++|+++|++++++|..|++ |+++|||++|++||
T Consensus 186 ~~~~~v~~s~~---~H~s~~~~~~~~g~~~---~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~ 259 (481)
T 4e1o_A 186 NARLVAYASDQ---AHSSVEKAGLISLVKM---KFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDC 259 (481)
T ss_dssp HTTEEEEEETT---SCHHHHHHHHHHTCEE---EEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC
T ss_pred cCCeEEEEcCc---chHHHHHHHHhCCCce---EEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCC
Confidence 4666 899999 8999999999998765 99999999999999999999999998988887 79999999999999
Q ss_pred chhhhc-----CCCceecccc-------------------------------cccc-ceeeeecCCCcccccccc-----
Q psy13453 85 LNAPVS-----NGPLKVGGVL-------------------------------RRVY-SSCLVPRGQKSLRTTVLF----- 122 (764)
Q Consensus 85 i~~ia~-----~~wlHVDa~l-------------------------------~~~y-~s~ll~rd~~~l~~~~s~----- 122 (764)
|++|++ ++|+||||+. ..++ |++++++++..+..++..
T Consensus 260 l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl 339 (481)
T 4e1o_A 260 LSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYL 339 (481)
T ss_dssp HHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGG
T ss_pred HHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhc
Confidence 999987 9999999842 1122 356777876554332221
Q ss_pred -------ccccCCcccCCCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeec
Q psy13453 123 -------HFLFQHWQIPLGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKV 195 (764)
Q Consensus 123 -------~~d~~d~tle~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P 195 (764)
.+++.+|++++||+++++++|++|+.+|.+||++++++.+++|+++++.|+++|+|+++.+|.+++|||++.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~ 419 (481)
T 4e1o_A 340 RHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKG 419 (481)
T ss_dssp CCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESS
T ss_pred cCcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCC
Confidence 1467789999999999999999999999999999999999999999999999999999999999999999852
Q ss_pred cccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 196 RFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 196 ~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
.+..+.++.++|.++|+++++.+.+++..++|+++++++|+++||+.+++.|+++++++.+
T Consensus 420 ----------------~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~l~~ 480 (481)
T 4e1o_A 420 ----------------PNSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLILS 480 (481)
T ss_dssp ----------------CHHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ----------------chHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 3456789999999999999899999999999999999999999999999999999988764
No 11
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.97 E-value=1.3e-31 Score=307.49 Aligned_cols=259 Identities=17% Similarity=0.224 Sum_probs=216.1
Q ss_pred ccc-ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCc
Q psy13453 8 PKL-AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSL 85 (764)
Q Consensus 8 ~~~-~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi 85 (764)
|+. +|+|+. .|||+.|+++++|++..+++.||+|++++||+++|+++|+++.++|..|.+ |+++|+|++|.+|||
T Consensus 191 ~~~~v~~s~~---~H~s~~~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l 267 (511)
T 3vp6_A 191 PKLVLFTSEQ---SHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPI 267 (511)
T ss_dssp CCEEEEEETT---SCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCH
T ss_pred CCeEEEECCC---chHHHHHHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccH
Confidence 565 899999 899999999999998888999999999999999999999999999988888 699999999999999
Q ss_pred hhhhc-----CCCceecccc--------------------------ccc-----c-ceeeeecCCCccccccc-------
Q psy13453 86 NAPVS-----NGPLKVGGVL--------------------------RRV-----Y-SSCLVPRGQKSLRTTVL------- 121 (764)
Q Consensus 86 ~~ia~-----~~wlHVDa~l--------------------------~~~-----y-~s~ll~rd~~~l~~~~s------- 121 (764)
++|++ ++|+|||++. .++ + |++++++++..+...+.
T Consensus 268 ~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~ 347 (511)
T 3vp6_A 268 QEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLF 347 (511)
T ss_dssp HHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTC
T ss_pred HHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCcccc
Confidence 99887 9999999832 112 2 36788888765443221
Q ss_pred -------cccccCCcccCCCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeC--CCCceeEEEE
Q psy13453 122 -------FHFLFQHWQIPLGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVC--PPSMGLVCFR 192 (764)
Q Consensus 122 -------~~~d~~d~tle~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~--~P~l~iV~Fr 192 (764)
..+++.+|++++||+++++++|++|+.+|.+|+.+++++.+++|+++++.|+++|+|+++. +|.+++||||
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~ 427 (511)
T 3vp6_A 348 QQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFW 427 (511)
T ss_dssp CSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEE
T ss_pred CcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEE
Confidence 1245678999999999999999999999999999999999999999999999999999999 7999999999
Q ss_pred eeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCe-eEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 193 LKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDR-LFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 193 y~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~-~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
|.|.+.+..... .......+..+.++.++|.++|.++++.+...+. .+||++++||.++.+||+.+++.|+++++++
T Consensus 428 ~~p~~~~~~~~~-~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~~~ 505 (511)
T 3vp6_A 428 YIPQSLRGVPDS-PQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 505 (511)
T ss_dssp ECCGGGSSCCCC-HHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred EeCccccccccc-hhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 998765321100 0000123445678999999999988887666654 5899999999999999999999999999775
No 12
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.97 E-value=5.9e-31 Score=301.22 Aligned_cols=265 Identities=24% Similarity=0.265 Sum_probs=218.6
Q ss_pred CCCCCChhhHhhcCCC-CCCCCCCCHHHHHHHHHHHHcCCCCCCCCCccc-cccCCCCChHHHHHHHHHHhhcccCcccc
Q psy13453 478 VLPSVEPGYLASLVPG-EMPEEGEDWRHIMRDMNTVIMPGITHWQSPQFN-AYFPTGSSYPSIVGDMLSGAFGLIGFSWL 555 (764)
Q Consensus 478 v~~~~~p~~l~~~l~~-~lP~~g~~~~~il~~l~~~i~~~~~~~~~P~~~-~~~~~~~~~~~~lad~l~~~lN~n~~~~~ 555 (764)
..|...+.++++.+|. .+|++|.+.+++++++.+.+.. ..||+++ +.+.+ ..+...+.+++...+|.+...|.
T Consensus 14 ~~~~~~~~~~~~~lp~~~~p~~~~~~~~~~~~~~~~i~l----~gnp~~~l~s~~t-~~~~~~v~~~l~~~~~~~~~~~~ 88 (502)
T 3hbx_A 14 VHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELML----DGNPRLNLASFVT-TWMEPECDKLIMSSINKNYVDMD 88 (502)
T ss_dssp CSCTTTSSGGGSCCCSSSCCSSCCCHHHHHHHHHHHGGG----SCCGGGBTTCCSC-CCCCHHHHHHHHHTTTCBTTCTT
T ss_pred ccccccchhhhhhccCCCCCCCCCCHHHHHHHHHHHhcc----CCCCCceeccccC-CCCCHHHHHHHHHHhccCCCChh
Confidence 4455678899999987 9999999999999999998753 4678853 33322 22334578889999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
.+|.++++|+++++|+++++|++.+. .....|++|+|||+||++++.+++.++.++.+..|.+ ..+..|+
T Consensus 89 ~~p~~~~le~~~~~~la~l~g~~~~~----~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~------~~~~~vi 158 (502)
T 3hbx_A 89 EYPVTTELQNRCVNMIAHLFNAPLEE----AETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKP------VDKPNIV 158 (502)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCCCS----SCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCC------CSCCEEE
T ss_pred cChhHHHHHHHHHHHHHHHhCCCccc----ccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCC------CCCcEEE
Confidence 99999999999999999999998310 1235788999999999999999988766544332211 1244789
Q ss_pred ecCCcchhHHHHHHhCCCceEEEecCCC-CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc-
Q psy13453 636 TSDQSNSSVEKSAIIGDVPVRQLRSDDN-GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY- 713 (764)
Q Consensus 636 ~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~-g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~- 713 (764)
+|+.+|+|+.++++++|+.++.||++++ ++||+++|+++|.++ |.+|+++.|+|.+|.++|+++|+++|+++
T Consensus 159 ~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~ 232 (502)
T 3hbx_A 159 TGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDEN------TICVAAILGSTLNGEFEDVKLLNDLLVEKN 232 (502)
T ss_dssp EETTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCCTT------EEEEEEEBSCTTTCCBCCHHHHHHHHHHHH
T ss_pred EcCCchHHHHHHHHHcCceeEEEecCCCcCcCCHHHHHHHHhhC------CEEEEEecCCCCCCcccCHHHHHHHHHHhh
Confidence 9999999999999999999999999865 999999999998764 67999999999999999999999999999
Q ss_pred -----CCEEEEecccccccc--ccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 714 -----NIWLHVDAAYAGSAL--LLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 714 -----glwLHVDaA~Gg~~l--~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
|+|+|||+||++++. +++.++..+. ++++||+++++|||+++|.+||+++
T Consensus 233 ~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~-~~~~D~v~~s~hK~l~~p~g~G~~~ 289 (502)
T 3hbx_A 233 KETGWDTPIHVDAASGGFIAPFLYPELEWDFR-LPLVKSINVSGHKYGLVYAGIGWVI 289 (502)
T ss_dssp HHHCCCCCEEEECTTGGGTHHHHCTTCCCSTT-STTEEEEEEETTTTTCCCSSCEEEE
T ss_pred hccCCCCeEEEECCccchhhhhhCcccccccC-CCCceEEEECcccccCCCCCeEEEE
Confidence 999999999998764 4566655554 6788999999999999999999764
No 13
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.97 E-value=9.9e-31 Score=293.40 Aligned_cols=235 Identities=17% Similarity=0.139 Sum_probs=188.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHcCCCCCCC-----------------CCccccccCCCCChHHHHHHHHHHhhcccCcccc
Q psy13453 493 GEMPEEGEDWRHIMRDMNTVIMPGITHWQ-----------------SPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWL 555 (764)
Q Consensus 493 ~~lP~~g~~~~~il~~l~~~i~~~~~~~~-----------------~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~ 555 (764)
..+|++|.+-++|...+.+.-..+.++|. .||||+|+++. +..+|++.+ |. .|.
T Consensus 21 ~~~p~~g~~~~~i~~~l~~~~~~d~~~~~~~~~~geregrv~~~~~~~r~~g~~hg~----~~~~d~l~~----~~-~~~ 91 (450)
T 3bc8_A 21 GKCPEDGWDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGI----GRSGDISAV----QP-KAA 91 (450)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHHTBGGGCTTCCCCSSCCCCCSCHHHHHHTTTCCSCB----CC-----------CC-SBH
T ss_pred ccCCccCCCHHHHHHHHHHHhhCCCCccccccccCcccceEecccccCCccceecch----hHHHHHHHh----Cc-ccc
Confidence 35899999999999999987666666663 27999999886 556688777 34 788
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChH-HHHHHHHHHHHHHHhhhhccCCCCCccccccCceEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTAS-EATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVA 634 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgT-eANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi 634 (764)
.+|.+..+|+.++.|+.+++|+|+. .++++++|+| +++.+++.+||....+ .+ .|
T Consensus 92 ~~~~~~~~e~~~~~~~~~~lGlp~~--------~~~~lV~GaT~~~~a~~L~aar~~~~~---------------~~-~v 147 (450)
T 3bc8_A 92 GSSLLNKITNSLVLNVIKLAGVHSV--------ASCFVVPMATGMSLTLCFLTLRHKRPK---------------AK-YI 147 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTC--------CEEEEESSCHHHHHHHHHHHHHHHCTT---------------CC-EE
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCC--------ceEEEECCHHHHHHHHHHHHcchhhcC---------------CC-EE
Confidence 9999999999999999999999985 4679999998 8888888888875211 12 35
Q ss_pred EecCCcchhHHHHHHhCCCceEEEec---CCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 635 YTSDQSNSSVEKSAIIGDVPVRQLRS---DDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 635 ~~S~~aH~Sv~kAa~~lGl~v~~Vp~---d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
+++..+|.|+.||+.++|+..+.|++ ++.+.||+++|+++|+++..+ .+++|+.|.+++.+|++|||++|+++|+
T Consensus 148 iv~r~aHkSv~kAl~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~--~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~ 225 (450)
T 3bc8_A 148 IWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPE--HILCLHSTTACFAPRVPDRLEELAVICA 225 (450)
T ss_dssp EEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHCGG--GEEEEEEESSCCTTBCCCCHHHHHHHHH
T ss_pred EEECCcHHHHHHHHHHcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCCC--CEEEEEEECCcCCCceecCHHHHHHHHH
Confidence 55677999999999999997666654 678999999999999987522 4789999998888899999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCC--CcccEEEEcCCccCCCCcCceeeC
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGL--EYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gi--e~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+||+|+|||+|||+.+.+.++.- ..++ ++||+++.|+|||+++|++||+++
T Consensus 226 ~~gi~l~VD~A~G~~~~~~~~l~--~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~ 278 (450)
T 3bc8_A 226 NYDIPHVVNNAYGLQSSKCMHLI--QQGARVGRIDAFVQSLDKNFMVPVGGAIIA 278 (450)
T ss_dssp HHTCCEEEECTTTTTCHHHHHHH--HHHHHHSCCCEEEEEHHHHHSCCSSCEEEE
T ss_pred HCCCeEEEECCCchhhhhhHhHH--HHHhcccCCCEEEECCccCCCchhccEEEE
Confidence 99999999999999766543221 1334 678999999999999999999874
No 14
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.97 E-value=1.1e-29 Score=288.57 Aligned_cols=245 Identities=32% Similarity=0.508 Sum_probs=211.6
Q ss_pred ccc-ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCc
Q psy13453 8 PKL-AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSL 85 (764)
Q Consensus 8 ~~~-~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi 85 (764)
|++ +|+|+. .|||+.|+++++|++. +.||+|++++||+++|+++|++++++|..|++ |+++|||++|++|||
T Consensus 181 ~~~~v~~s~~---~h~s~~~~~~~~G~~v---~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l 254 (486)
T 1js3_A 181 EKLVAYASDQ---AHSSVERAGLIGGVKL---KAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNL 254 (486)
T ss_dssp HHEEEEEETT---CCHHHHHHHHHHTCEE---EEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCH
T ss_pred CCEEEEECCC---CcHHHHHHHHhCCCce---EEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCH
Confidence 354 788888 8999999999999986 99999999999999999999999999988877 799999999999999
Q ss_pred hhhhc-----CCCceecccc-------------------------------cccc-ceeeeecCCCccccccc-------
Q psy13453 86 NAPVS-----NGPLKVGGVL-------------------------------RRVY-SSCLVPRGQKSLRTTVL------- 121 (764)
Q Consensus 86 ~~ia~-----~~wlHVDa~l-------------------------------~~~y-~s~ll~rd~~~l~~~~s------- 121 (764)
++|++ ++|+|||++. ..++ +++++++++..+...+.
T Consensus 255 ~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~~~~~~~l~~~~~~~~~yl~ 334 (486)
T 1js3_A 255 LEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLK 334 (486)
T ss_dssp HHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC-------
T ss_pred HHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEEEeCHHHHHHHhcCCchhhC
Confidence 99987 9999999942 0112 36788877643322221
Q ss_pred -------cccccCCcccCCCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEee
Q psy13453 122 -------FHFLFQHWQIPLGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLK 194 (764)
Q Consensus 122 -------~~~d~~d~tle~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~ 194 (764)
..+++.+|++++||+++++++|++|+.+|.+||++++++..++++++++.|+++|+|+++.+|+++++|||+.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~ 414 (486)
T 1js3_A 335 HSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLK 414 (486)
T ss_dssp -----CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEEEES
T ss_pred CCcccccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCceeEEEEEec
Confidence 1245677899999999999999999999999999999999999999999999999999999999999999985
Q ss_pred ccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHccC
Q psy13453 195 VRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLRGK 274 (764)
Q Consensus 195 P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~~~ 274 (764)
+ .+.++.++.++|.++|+++++.+.+++..++|++++++++++++++.+++.|+++.+++.++.
T Consensus 415 ~----------------~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~~~~~~ 478 (486)
T 1js3_A 415 G----------------SDGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAELLAAE 478 (486)
T ss_dssp S----------------CHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred C----------------hHHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 2 234678899999999998888888889999999999999999999999999999998887655
No 15
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.96 E-value=4.7e-29 Score=284.89 Aligned_cols=257 Identities=17% Similarity=0.222 Sum_probs=210.5
Q ss_pred cccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCchhh
Q psy13453 10 LAYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLNAP 88 (764)
Q Consensus 10 ~~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~~i 88 (764)
.+|+|++ .|||+.|+++++|+|.++|+.||++++++||+++|+++|+++.++|..|.+ |+++|+|++|++||+++|
T Consensus 191 ~v~~s~~---~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I 267 (504)
T 2okj_A 191 VLFTSEQ---SHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEI 267 (504)
T ss_dssp EEEEETT---SCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHH
T ss_pred EEEECCc---chHHHHHHHHHcCCCcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHH
Confidence 4888888 799999999999998778999999999999999999999998888877877 699999999999999998
Q ss_pred hc-----CCCceecccc--------------------------cc-----cc-ceeeeecCCCccccc------cc----
Q psy13453 89 VS-----NGPLKVGGVL--------------------------RR-----VY-SSCLVPRGQKSLRTT------VL---- 121 (764)
Q Consensus 89 a~-----~~wlHVDa~l--------------------------~~-----~y-~s~ll~rd~~~l~~~------~s---- 121 (764)
++ ++|+|||++. .| ++ ++++++|++..+... +.
T Consensus 268 ~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~ 347 (504)
T 2okj_A 268 ADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPD 347 (504)
T ss_dssp HHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSC
T ss_pred HHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCc
Confidence 87 9999999941 11 22 467888876443321 11
Q ss_pred ----cccccCCcccCCCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeC--CCCceeEEEEeec
Q psy13453 122 ----FHFLFQHWQIPLGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVC--PPSMGLVCFRLKV 195 (764)
Q Consensus 122 ----~~~d~~d~tle~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~--~P~l~iV~Fry~P 195 (764)
..+++.+|++++|||++++++|++|+.+|.+||++++++.+++++++++.|+++|+|+++. +|.+++|||++.|
T Consensus 348 ~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~ 427 (504)
T 2okj_A 348 KQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIP 427 (504)
T ss_dssp CSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECC
T ss_pred ccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeC
Confidence 1245778999999999999999999999999999999999999999999999999999998 6999999999986
Q ss_pred cccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCe-eEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 196 RFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDR-LFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 196 ~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~-~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
........ ........++.+.++.++|.++|+++++.+.+.+. .++|++++|+.|+++|++.+++.|+++++++
T Consensus 428 ~~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 428 QSLRGVPD-SPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp GGGSSCCC-CHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC-
T ss_pred cccccccc-chhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 43211000 00000112345778999999999988887777764 6999999999999999999999999887654
No 16
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.96 E-value=9.8e-29 Score=281.77 Aligned_cols=245 Identities=20% Similarity=0.243 Sum_probs=204.6
Q ss_pred cccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCchhh
Q psy13453 10 LAYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLNAP 88 (764)
Q Consensus 10 ~~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~~i 88 (764)
.+++|++ .|||+.|+++++|+|.++|+.||+|++++||+++|+++|+++.++|..|++ |+++|+|++|.+||+++|
T Consensus 204 ~v~~s~~---~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I 280 (497)
T 2qma_A 204 RIVCSKK---SHFTVQKSASWMGLGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFI 280 (497)
T ss_dssp EEEEETT---SCTHHHHHHHHTTSCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHH
T ss_pred EEEECCC---chHHHHHHHHHcCCCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHH
Confidence 4888887 899999999999998778999999999999999999999998877776766 699999999999999998
Q ss_pred hc-----CCCceecccc-------------------------ccc-----c-ceeeeecCCCcccccccc----------
Q psy13453 89 VS-----NGPLKVGGVL-------------------------RRV-----Y-SSCLVPRGQKSLRTTVLF---------- 122 (764)
Q Consensus 89 a~-----~~wlHVDa~l-------------------------~~~-----y-~s~ll~rd~~~l~~~~s~---------- 122 (764)
++ ++|+|||++. .++ + +++++++++..+.. +..
T Consensus 281 ~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~~~G~l~~~~~~~~~~-~~~~~~yl~~~~~ 359 (497)
T 2qma_A 281 ADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQTISCGALLVNDKSNFKF-LLHHADYLNREHD 359 (497)
T ss_dssp HHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCSSCEEEEESCGGGGGG-GCC----------
T ss_pred HHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCCcceEEEEEeCHHHHHH-hcCCchhcCCccc
Confidence 87 9999999941 122 2 36777777654321 111
Q ss_pred -ccccCCcccCCCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccc
Q psy13453 123 -HFLFQHWQIPLGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKL 201 (764)
Q Consensus 123 -~~d~~d~tle~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~ 201 (764)
.+++.++++++||+++++++|++++.+|.+||++++++..+++++|++.|+++++|+++.+|..++|||++.+..
T Consensus 360 ~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~---- 435 (497)
T 2qma_A 360 ELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTVLFRATHET---- 435 (497)
T ss_dssp ----------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSSEEEEEECCSS----
T ss_pred cCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCceEEEEEEcCCc----
Confidence 145667899999999999999999999999999999999999999999999999999999999999999987521
Q ss_pred cccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 202 DNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 202 ~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
...++++.++.++|.++|+++...+.+++..++|++++|+.+++++++.+++.|+++.+++
T Consensus 436 --------~~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 436 --------ADLDELNKALRLEALTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVEL 496 (497)
T ss_dssp --------SCHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred --------cCHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 1234678899999999999988888888889999999999999999999999999987653
No 17
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.96 E-value=9.7e-29 Score=283.32 Aligned_cols=258 Identities=19% Similarity=0.211 Sum_probs=210.7
Q ss_pred cc-cccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCc
Q psy13453 8 PK-LAYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSL 85 (764)
Q Consensus 8 ~~-~~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi 85 (764)
|+ .+++|+. .|||+.|+++++|++.++++.||++++++||+++|+++|+++.++|..|.+ |+++|+|++|++||+
T Consensus 202 ~~~~vl~s~~---~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l 278 (515)
T 2jis_A 202 PPLALFTSKE---CHYSIQKGAAFLGLGTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPL 278 (515)
T ss_dssp CCEEEEEETT---SCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCH
T ss_pred CCeEEEECCC---ccHHHHHHHHHcCCCCCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCH
Confidence 45 4888988 799999999999998778999999999999999999999998888877777 699999999999999
Q ss_pred hhhhc-----CCCceecccc-------------------------------cccc-ceeeeecCC-Cccccccc------
Q psy13453 86 NAPVS-----NGPLKVGGVL-------------------------------RRVY-SSCLVPRGQ-KSLRTTVL------ 121 (764)
Q Consensus 86 ~~ia~-----~~wlHVDa~l-------------------------------~~~y-~s~ll~rd~-~~l~~~~s------ 121 (764)
++|++ ++|+|||++. ..++ ++++++|++ ..+...+.
T Consensus 279 ~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl 358 (515)
T 2jis_A 279 EAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYL 358 (515)
T ss_dssp HHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC-----
T ss_pred HHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhc
Confidence 99887 9999999931 1223 468888887 43332111
Q ss_pred --------cccccCCcccCCCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEe
Q psy13453 122 --------FHFLFQHWQIPLGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRL 193 (764)
Q Consensus 122 --------~~~d~~d~tle~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry 193 (764)
..+++++++++++||++++++|++|+.+|.+||++++++.+++++++++.|+++|+|+++.+|.+++||||+
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~ 438 (515)
T 2jis_A 359 FQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWF 438 (515)
T ss_dssp ----CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEE
T ss_pred cCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEE
Confidence 114577889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCC-eeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 194 KVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQD-RLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 194 ~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g-~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
.|++.++... .....+..+++|.++.++|.++|+++++.+.+.+ ..++|++++++.++++|++.+++.|++++++
T Consensus 439 ~p~~~~~~~~-~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 439 VPPSLRGKQE-SPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp CCGGGTTCTT-STTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred eCcccccccc-chhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 8753221000 0000011233456789999999998888777765 4799999999999999999999999887643
No 18
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.95 E-value=5.3e-28 Score=274.93 Aligned_cols=246 Identities=18% Similarity=0.219 Sum_probs=205.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHcC-CCCCCCCCccccccCCCC-ChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHH
Q psy13453 492 PGEMPEEGEDWRHIMRDMNTVIMP-GITHWQSPQFNAYFPTGS-SYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMN 569 (764)
Q Consensus 492 ~~~lP~~g~~~~~il~~l~~~i~~-~~~~~~~P~~~~~~~~~~-~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~ 569 (764)
...+|++|.+.+++++++++.... ....|.||+|++++..+. ....++.+.+..+.+.+...|..+|...++|.++.+
T Consensus 35 ~~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 114 (497)
T 3mc6_A 35 FPQLPSNGIPQDDVIEELNKLNDLIPHTQWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVS 114 (497)
T ss_dssp CSSCCSSCCCHHHHHHHHHHHHHSSCCCCGGGTCBSSSCSCCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHH
T ss_pred ccCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCCCEeeecCCCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHH
Confidence 357899999999999999998763 556799999999976554 344566677777777788889999999999999999
Q ss_pred HHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHH
Q psy13453 570 WLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAI 649 (764)
Q Consensus 570 ~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~ 649 (764)
|+++++|++.+ ...++||+|||+||++++.++|++...+.+ .++..|+++..+|+++.+++.
T Consensus 115 ~la~~~g~~~~-------~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g-----------~~~~~Vi~~~~~h~~~~~~~~ 176 (497)
T 3mc6_A 115 MVLRMFNAPSD-------TGCGTTTSGGTESLLLACLSAKMYALHHRG-----------ITEPEIIAPVTAHAGFDKAAY 176 (497)
T ss_dssp HHHHHTTCCTT-------TCCEEEESSHHHHHHHHHHHHHHHHHHHSC-----------CSSCEEEEETTSCHHHHHHHH
T ss_pred HHHHHhCCCCC-------CCeEEEcCcHHHHHHHHHHHHHHHHHhcCC-----------CCCceEEEeCCccHHHHHHHH
Confidence 99999999821 147899999999999999999886543211 113478999999999999999
Q ss_pred hCCCceEEEecCC-CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEecccccccc
Q psy13453 650 IGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSAL 728 (764)
Q Consensus 650 ~lGl~v~~Vp~d~-~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l 728 (764)
.+|++++.||+++ ++++|+++|+++|+++ +.+|+++.+++.+|.++|+++|+++|++||+|+|||+||+++..
T Consensus 177 ~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~ 250 (497)
T 3mc6_A 177 YFGMKLRHVELDPTTYQVDLGKVKKFINKN------TVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIV 250 (497)
T ss_dssp HSCCEEEEECBCTTTCSBCTTTTGGGCCSS------EEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHH
T ss_pred HcCCeEEEEecCcccCcCCHHHHHHHHhhC------CEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhh
Confidence 9999999999997 8999999999998653 67999999999999999999999999999999999999998765
Q ss_pred c---------cchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 729 L---------LPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 729 ~---------~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
. +|.++....| +|++++++|||++.|.+||+++
T Consensus 251 ~f~~~~~~~~~~~~~~~~~g---~d~~~~s~~K~l~~~~~~g~~~ 292 (497)
T 3mc6_A 251 SFMEKAGYKNLPLLDFRVPG---VTSISCDTHKYGFAPKGSSVIM 292 (497)
T ss_dssp GGGTTTTCCSCCCCSTTSTT---CCEEEEETTTTTCCCSSCEEEE
T ss_pred hhhhhhcccCCccccccCCC---CcEEEECchhhcCCCCCceeEE
Confidence 3 2233333344 5999999999999999999874
No 19
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.95 E-value=2.1e-27 Score=271.69 Aligned_cols=247 Identities=16% Similarity=0.148 Sum_probs=210.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCccccccCCC-CChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHH
Q psy13453 493 GEMPEEGEDWRHIMRDMNTVIMPGITHWQSPQFNAYFPTG-SSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWL 571 (764)
Q Consensus 493 ~~lP~~g~~~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~-~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~l 571 (764)
..+|++|.+.+++++++++.+.++...|.+++|++++..+ ......+.+.+...++.+...+..+|....+|.++.+|+
T Consensus 69 ~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~l 148 (514)
T 3mad_A 69 ARLPRAGLPRAEILAEIAAMGAAESPAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMT 148 (514)
T ss_dssp SSCCSSCCCHHHHHHHHHHHHHHHHHHHHTTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhccCCCCCCCceEEEecCCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHH
Confidence 5689999999999999999888888889999999998654 455678888888889999999999999999999999999
Q ss_pred HHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhC
Q psy13453 572 GKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIG 651 (764)
Q Consensus 572 a~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~l 651 (764)
++++|++.+ .+..+|+||+|||+||..++.+++.....+.+ .++..|+++..+|.++.++++.+
T Consensus 149 a~~~g~~~~-----~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g-----------~~~d~Vi~~~~~~~~~~~~~~~~ 212 (514)
T 3mad_A 149 AHMLGGDAA-----GGTVCGTVTSGGTESLLLAMKTYRDWARATKG-----------ITAPEAVVPVSAHAAFDKAAQYF 212 (514)
T ss_dssp HHHTTGGGG-----TSCCEEEEESSHHHHHHHHHHHHHHHHHHHHC-----------CSSCEEEEETTSCTHHHHHHHHH
T ss_pred HHHcCCCCc-----cCCcceEEcCcHHHHHHHHHHHHHHHhhhhcC-----------CCCCeEEEeCccchHHHHHHHHc
Confidence 999999731 01246799999999999999999876533211 12347899999999999999999
Q ss_pred CCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccc--
Q psy13453 652 DVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALL-- 729 (764)
Q Consensus 652 Gl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~-- 729 (764)
|++++.||++++++||+++|+++|+++ +.+|+++.+++.+|.++|+++|+++|++||+|||||+||+++.+.
T Consensus 213 G~~v~~v~~~~~~~~d~~~Le~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~ 286 (514)
T 3mad_A 213 GIKLVRTPLDADYRADVAAMREAITPN------TVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWA 286 (514)
T ss_dssp TCEEEEECBCTTSCBCHHHHHHHCCTT------EEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHH
T ss_pred CCeeEEeeeCCCCCCCHHHHHHHhccC------CEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhH
Confidence 999999999999999999999998653 568999999999999999999999999999999999999987653
Q ss_pred ------cchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 730 ------LPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 730 ------~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
++.++....| +|++++++|||++.|+++|+++
T Consensus 287 ~~~g~~~~~~~~~~~g---~d~~~~s~~K~l~~~~~~g~~~ 324 (514)
T 3mad_A 287 ERLGYPVPPFDFRLEG---VTSVSADTHKYGYGAKGTSVIL 324 (514)
T ss_dssp HHTTCCCCCCSTTSTT---CCEEEECTTTTTCCCSSCEEEE
T ss_pred HhcCCCCCcccccCCC---CcEEEECchhccCCCCCeEEEE
Confidence 1233333334 5999999999999999999874
No 20
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.94 E-value=7.5e-27 Score=263.69 Aligned_cols=266 Identities=16% Similarity=0.163 Sum_probs=197.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhHhhcCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCccc
Q psy13453 447 VTPPPNEEFREFGKAAIDFIADYVDNIRERPVLPSVEPGYLASLVPGEMPEEGEDWRHIMRDMNTVIMPGITHWQSPQFN 526 (764)
Q Consensus 447 ~~~~~~~~~~~~~~~~v~~i~~y~~~~~~~~v~~~~~p~~l~~~l~~~lP~~g~~~~~il~~l~~~i~~~~~~~~~P~~~ 526 (764)
...+=++.|.+.+++.++...++++++-. ...+|++|.+.+++.+.+.+....+. ..|+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~lp~~g~~~~~i~~~~~~~~~~~~-----~~yl 84 (456)
T 2z67_A 26 IEGLIPKNMEKRGELVLNEYLKEIEDVFN----------------HRKIPENGIDDEKIKLFLKFLSMMDT-----DKDP 84 (456)
T ss_dssp CCSSSCHHHHHHHHHHHHHHTHHHHHHHH----------------HCSCCSSCCCHHHHHHHHHHHHTTBG-----GGCT
T ss_pred hhccCcHHHHHHHHHHHHHHHHHHHHhhc----------------cCCCCCCCCCHHHHHHHHHHHHhccc-----cccc
Confidence 44555788999999988877777766311 13578999999999888777543322 2455
Q ss_pred cccCCCCChHHHHHHHHHH----hhc----------ccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEE
Q psy13453 527 AYFPTGSSYPSIVGDMLSG----AFG----------LIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGI 592 (764)
Q Consensus 527 ~~~~~~~~~~~~lad~l~~----~lN----------~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~Gv 592 (764)
++..+++.+..++..+... ++| .|. .|..+|.+..+++++.+|+++++|++. . ++
T Consensus 85 d~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~g~~~---------~-~~ 153 (456)
T 2z67_A 85 KSVRIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQP-KASGASIMYALTNKILESFFKQLGLNV---------H-AI 153 (456)
T ss_dssp TCEECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCT-TBHHHHHHHHHHHHHHHHHHHHTTCCC---------E-EE
T ss_pred cccccccccccccccccCccccccCCCccHHHHHHhhCc-ccccCcHHHHHHHHHHHHHHHHcCCCC---------C-EE
Confidence 5554444333322222211 111 222 455667789999999999999999975 3 89
Q ss_pred EeCChH-HHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEec---CCCCcccH
Q psy13453 593 IQSTAS-EATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRS---DDNGVLRG 668 (764)
Q Consensus 593 fTsGgT-eANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~---d~~g~md~ 668 (764)
||+||| ++|+.++.++|... + +..|++++.+|+|+.++++..|+.++.|+. +++|++|+
T Consensus 154 ~t~g~te~a~~~al~~~~~~~-~----------------~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~d~ 216 (456)
T 2z67_A 154 ATPISTGMSISLCLSAARKKY-G----------------SNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPV 216 (456)
T ss_dssp EESSCHHHHHHHHHHHHHHHH-C----------------CCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCH
T ss_pred EeCcHHHHHHHHHHHHHHHhc-C----------------CCEEEEECCCcHHHHHHHHHcCCCceEEEEeccCCCCCcCH
Confidence 999999 57777888776532 1 113566667999999999999999988886 78899999
Q ss_pred HHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEecccccccc-ccchhhhhhcCCCcccEEE
Q psy13453 669 DALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSAL-LLPEYAHLKRGLEYVDSFD 747 (764)
Q Consensus 669 ~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l-~~~~~r~~l~gie~aDSit 747 (764)
++|+++|+.+..++ .+++|+.+.++|.+|.++|+++|+++|++||+|+|||+|||+..+ ..+.....+.+ .+|+++
T Consensus 217 ~~l~~~i~~~~~~~-~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~--~~D~~~ 293 (456)
T 2z67_A 217 EDIENAIKKEIELG-NRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY--RVDAVV 293 (456)
T ss_dssp HHHHHHHHHHHHTT-CCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS--CCSEEE
T ss_pred HHHHHHHHHHhhCC-CeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCC--CCCEEE
Confidence 99999994332222 478889999999999999999999999999999999999998765 34544444444 689999
Q ss_pred EcCCccCCCCcCceeeC
Q psy13453 748 FNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 748 ~d~HK~l~~P~~~g~l~ 764 (764)
+|+|||+++|.++|+++
T Consensus 294 ~s~hK~~~~p~g~G~l~ 310 (456)
T 2z67_A 294 SSSDKNLLTPIGGGLVY 310 (456)
T ss_dssp EEHHHHHCCCSSCEEEE
T ss_pred EcCCCCcCCCCCeEEEE
Confidence 99999999999999875
No 21
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.91 E-value=3.9e-23 Score=224.68 Aligned_cols=246 Identities=20% Similarity=0.146 Sum_probs=194.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHH
Q psy13453 494 EMPEEGEDWRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGK 573 (764)
Q Consensus 494 ~lP~~g~~~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~ 573 (764)
.+|+.|.+.+++++++.+.. +...+|.+|+|+++..+++.+ . +.+.+...+..+...+...|....++.++.+|+++
T Consensus 4 ~lp~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~-~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~ 80 (397)
T 3f9t_A 4 NMQEKGVSEKEILEELKKYR-SLDLKYEDGNIFGSMCSNVLP-I-TRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGS 80 (397)
T ss_dssp SCCSSCCCHHHHHHHHHHHH-TTSCCGGGTCBCSCSCCCCCT-H-HHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCeEEEecCCCcH-H-HHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHH
Confidence 57999999999999999865 445568899999999776654 3 34555666655444455567889999999999999
Q ss_pred HcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCC
Q psy13453 574 ALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDV 653 (764)
Q Consensus 574 llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl 653 (764)
++|.+. ...+||+|||+||..++.+++..+....... . +..++..|+++..+|+++.+++...|+
T Consensus 81 ~~~~~~---------~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~---~---~~~~gd~vl~~~~~~~~~~~~~~~~g~ 145 (397)
T 3f9t_A 81 LLNNKD---------AYGHIVSGGTEANLMALRCIKNIWREKRRKG---L---SKNEHPKIIVPITAHFSFEKGREMMDL 145 (397)
T ss_dssp HTTCTT---------CEEEEESCHHHHHHHHHHHHHHHHHHHHHTT---C---CCCSSCEEEEETTCCTHHHHHHHHHTC
T ss_pred HhCCCC---------CCEEEecCcHHHHHHHHHHHHHHHHhhhhhc---c---cCCCCeEEEECCcchhHHHHHHHHcCc
Confidence 999876 3689999999999999999887643221110 0 112345788999999999999999999
Q ss_pred ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchh
Q psy13453 654 PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEY 733 (764)
Q Consensus 654 ~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~ 733 (764)
+++.||+++++.+|+++|+++|++. .+.+|+++.+++.+|.++|+++|+++|++||+|+|+|+||+++.+.....
T Consensus 146 ~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~ 220 (397)
T 3f9t_A 146 EYIYAPIKEDYTIDEKFVKDAVEDY-----DVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDD 220 (397)
T ss_dssp EEEEECBCTTSSBCHHHHHHHHHHS-----CCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCG
T ss_pred eeEEEeeCCCCcCCHHHHHHHHhhc-----CCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhccc
Confidence 9999999999999999999999872 25588889999999999999999999999999999999999875532211
Q ss_pred ---------hhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 734 ---------AHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 734 ---------r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
...+. . .+|++++++||+++.|.++|+++
T Consensus 221 ~~~~~~~~~~~~~~-~-~~~~~~~s~~K~~~~~~~~g~~~ 258 (397)
T 3f9t_A 221 KYKKKGVNYKFDFS-L-GVDSITIDPHKMGHCPIPSGGIL 258 (397)
T ss_dssp GGCCTTCCCCCSGG-G-TCSEEECCTTTTTCCCSSCEEEE
T ss_pred cccccccccccccc-c-cCCeEEEccccccCCCCCceEEE
Confidence 11111 1 46999999999999999999763
No 22
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.90 E-value=4.4e-23 Score=231.97 Aligned_cols=232 Identities=13% Similarity=0.163 Sum_probs=185.9
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC-CCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCchhhhc-------
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD-SEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLNAPVS------- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~-~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~~ia~------- 90 (764)
.|||+.|+++++|+.. +.||+++ +++||+++|+++|+++ |.+ |++.|++++|++||+++|++
T Consensus 148 ~h~~~~~~~~~~G~~v---~~v~~~~~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~ 218 (452)
T 2dgk_A 148 VQICWHKFARYWDVEL---REIPMRPGQLFMDPKRMIEACDEN------TIGVVPTFGVTYTGNYEFPQPLHDALDKFQA 218 (452)
T ss_dssp CCHHHHHHHHHTTCEE---EECCCBTTBCSCCHHHHHHHCCTT------EEEEECBBSCTTTCBBCCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHcCceE---EEEecCCCCCeECHHHHHHHHhhC------CEEEEEEcCCcCCcccCCHHHHHHHHHHHhh
Confidence 6999999999999976 9999987 7999999999999753 455 79999999999999999874
Q ss_pred ----CCCceeccccc---------------------------ccc------ceeeeecCCCcccccccccccc-----CC
Q psy13453 91 ----NGPLKVGGVLR---------------------------RVY------SSCLVPRGQKSLRTTVLFHFLF-----QH 128 (764)
Q Consensus 91 ----~~wlHVDa~l~---------------------------~~y------~s~ll~rd~~~l~~~~s~~~d~-----~d 128 (764)
++|+|||++.. +++ +++++++++..+...+.....| .+
T Consensus 219 ~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (452)
T 2dgk_A 219 DTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGT 298 (452)
T ss_dssp HHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTCCEEE
T ss_pred ccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCCCCCC
Confidence 68999999521 121 2567777655443333322233 36
Q ss_pred cccCCCCcc-cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC----CCceeEEEEeeccccccccc
Q psy13453 129 WQIPLGRRF-RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCP----PSMGLVCFRLKVRFWDKLDN 203 (764)
Q Consensus 129 ~tle~SRr~-~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~----P~l~iV~Fry~P~~~~~~~~ 203 (764)
++++++|++ .++++|++|+.+|.+||++++++..++++++.+.|+++++|+++.+ +.+++|||++.+..
T Consensus 299 ~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~------ 372 (452)
T 2dgk_A 299 FAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGE------ 372 (452)
T ss_dssp CCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTC------
T ss_pred cccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCcc------
Confidence 678999977 8899999999999999999999999999999999999999999875 78899999986321
Q ss_pred cccCccCCccHHH-HHHHHHHHhcCc---EEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHccCC
Q psy13453 204 LFGTISFGDNDLN-KAVYDRIIARKV---IYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLRGKS 275 (764)
Q Consensus 204 ~~~~~~~~~d~~n-~~L~~~L~~~G~---~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~~~~ 275 (764)
.+.+| .++.++|.++|+ .+.+.+.+++..++|+++++++| +++++.+++.|+++.+++.+.+.
T Consensus 373 --------~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t-~e~id~li~~l~~~~~~~~~~~~ 439 (452)
T 2dgk_A 373 --------DPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFE-MDFAELLLEDYKASLKYLSDHPK 439 (452)
T ss_dssp --------CCSCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTCC-HHHHHHHHHHHHHHHHHHHHCGG
T ss_pred --------cccCCHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCCCC-HHHHHHHHHHHHHHHHHHHhCCC
Confidence 11133 578899999998 34444556667899999998885 99999999999999988876553
No 23
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.88 E-value=7e-23 Score=234.21 Aligned_cols=257 Identities=14% Similarity=0.117 Sum_probs=200.9
Q ss_pred ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc
Q psy13453 11 AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS 90 (764)
Q Consensus 11 ~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~ 90 (764)
.+.++. .|+|+.++++.+|++. +.||++++++||+++|+++|+++ +-+++.+.+++++|.++|+++|++
T Consensus 195 Vi~~~~---~~~~~~~~~~~~G~~v---~~v~~~~~~~~d~~~Le~~i~~~-----~~~v~~~~~~nptG~~~~l~~i~~ 263 (514)
T 3mad_A 195 AVVPVS---AHAAFDKAAQYFGIKL---VRTPLDADYRADVAAMREAITPN-----TVVVAGSAPGYPHGVVDPIPEIAA 263 (514)
T ss_dssp EEEETT---SCTHHHHHHHHHTCEE---EEECBCTTSCBCHHHHHHHCCTT-----EEEEEEETTCTTTCCCCCHHHHHH
T ss_pred EEEeCc---cchHHHHHHHHcCCee---EEeeeCCCCCCCHHHHHHHhccC-----CEEEEEeCCCCCCccccCHHHHHH
Confidence 455555 7999999999999986 99999999999999999999753 224478999999999999999886
Q ss_pred -----CCCceeccccc-------------------------------ccc------ceeeeecCCCcccccccccc----
Q psy13453 91 -----NGPLKVGGVLR-------------------------------RVY------SSCLVPRGQKSLRTTVLFHF---- 124 (764)
Q Consensus 91 -----~~wlHVDa~l~-------------------------------~~y------~s~ll~rd~~~l~~~~s~~~---- 124 (764)
++|+|||++.. +++ +++++.+++......+....
T Consensus 264 la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 343 (514)
T 3mad_A 264 LAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPG 343 (514)
T ss_dssp HHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTT
T ss_pred HHHHhCCeEEEecccccccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCC
Confidence 99999999621 111 13455555433222211111
Q ss_pred -ccCCcccCCCCccc-HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeecccccccc
Q psy13453 125 -LFQHWQIPLGRRFR-ALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLD 202 (764)
Q Consensus 125 -d~~d~tle~SRr~~-ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~ 202 (764)
.+..+++.++|... ++++|++++.+|.+||.+++++..++++++.+.|++.++++++.++ .+++.|+..
T Consensus 344 ~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~-------- 414 (514)
T 3mad_A 344 GLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDP-LWVIAVASD-------- 414 (514)
T ss_dssp CSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCC-SSEEEEECS--------
T ss_pred CcccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCC-eEEEEEeCC--------
Confidence 23356778888554 6799999999999999999999999999999999999999998877 456677431
Q ss_pred ccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCCCcc
Q psy13453 203 NLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLRGKSLGPAGKV 282 (764)
Q Consensus 203 ~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~~~~~~~~~~~ 282 (764)
..+ ..++.++|.++|+.+ ...+.+..+|++++++++++++++++++.|+++.+++.+.+...
T Consensus 415 --------~~~--~~~l~~~L~~~Gi~v---~g~~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~~~~~~----- 476 (514)
T 3mad_A 415 --------ELN--IYQVMEEMAGRGWRL---NGLHRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRAHPEKA----- 476 (514)
T ss_dssp --------SSC--HHHHHHHHHTTTCBC---EEETTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHHCTTCC-----
T ss_pred --------CCC--HHHHHHHHHhcCCEe---ccCCCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-----
Confidence 111 247889999999865 33455668999999999999999999999999998887665431
Q ss_pred cCccchhhccccCCCcchhhccccc
Q psy13453 283 MGGAQAIAGTESSGPADQVLGEIQP 307 (764)
Q Consensus 283 ~~~~~a~~g~~~~~pd~~~~~~~~~ 307 (764)
+|.+++||+++++|| ++|+||+-
T Consensus 477 -~~~~~~yg~~~~~~~-~~~~~~~~ 499 (514)
T 3mad_A 477 -TGMAPVYGMAAAAPP-ELVRQVLT 499 (514)
T ss_dssp -CTTHHHHHHHHHSCH-HHHHHHHH
T ss_pred -CCceehhhhcccCCH-HHHHHHHH
Confidence 567999999999999 99998864
No 24
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.87 E-value=1.2e-21 Score=224.00 Aligned_cols=238 Identities=14% Similarity=0.151 Sum_probs=190.2
Q ss_pred cccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCC-CcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCchh
Q psy13453 10 LAYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDS-EWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLNA 87 (764)
Q Consensus 10 ~~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~-~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~~ 87 (764)
.+++|+. .|+|+.|+++++|++. +.||++++ ++||+++|+++|+++ |.+ +.+.|+|++|.+||+++
T Consensus 156 ~vi~~~~---~h~s~~~~~~~~G~~~---~~v~~~~~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~ 223 (502)
T 3hbx_A 156 NIVTGAN---VQVCWEKFARYFEVEL---KEVKLSEGYYVMDPQQAVDMVDEN------TICVAAILGSTLNGEFEDVKL 223 (502)
T ss_dssp EEEEETT---CCHHHHHHHHHTTCEE---EEECCBTTBCSCCHHHHHHHCCTT------EEEEEEEBSCTTTCCBCCHHH
T ss_pred EEEEcCC---chHHHHHHHHHcCcee---EEEecCCCcCcCCHHHHHHHHhhC------CEEEEEecCCCCCCcccCHHH
Confidence 3567776 7999999999999987 99999875 999999999999863 455 69999999999999999
Q ss_pred hhc-----------CCCceeccccc---------------------------ccc------ceeeeecCCCccccccccc
Q psy13453 88 PVS-----------NGPLKVGGVLR---------------------------RVY------SSCLVPRGQKSLRTTVLFH 123 (764)
Q Consensus 88 ia~-----------~~wlHVDa~l~---------------------------~~y------~s~ll~rd~~~l~~~~s~~ 123 (764)
|++ ++|+|||++.. ++| +++++++++..+...+...
T Consensus 224 I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~ 303 (502)
T 3hbx_A 224 LNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFH 303 (502)
T ss_dssp HHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEE
T ss_pred HHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccC
Confidence 774 68999999531 122 2457777766654444333
Q ss_pred ccc-----CCcccCCCCcc-cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC-CCceeEEEEeecc
Q psy13453 124 FLF-----QHWQIPLGRRF-RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCP-PSMGLVCFRLKVR 196 (764)
Q Consensus 124 ~d~-----~d~tle~SRr~-~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~-P~l~iV~Fry~P~ 196 (764)
..| ..+++++||++ .++++|++|+.+|.+||.+++++.++++++|++.|+++++|+++.+ |.+++|+|++.+.
T Consensus 304 ~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~ 383 (502)
T 3hbx_A 304 INYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDS 383 (502)
T ss_dssp ECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESSC
T ss_pred cccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecCC
Confidence 232 35678899965 8899999999999999999999999999999999999999999988 8999999998531
Q ss_pred ccccccccccCccCCccHHH-HHHHHHHHhcCcEEEE---eceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 197 FWDKLDNLFGTISFGDNDLN-KAVYDRIIARKVIYIV---KGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 197 ~~~~~~~~~~~~~~~~d~~n-~~L~~~L~~~G~~~vs---~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
. .++ .++.++|.++|+++.. .+.+++..++|+++. ..+++++++.++++|+++.+++.+
T Consensus 384 ~----------------~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~-~~~t~edid~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 384 S----------------CHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIR-EDFSRTLAERLVIDIEKVMRELDE 446 (502)
T ss_dssp S----------------SCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred C----------------cCCHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeC-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1 122 4789999999997432 334456789999765 566799999999999999998877
Q ss_pred cCCC
Q psy13453 273 GKSL 276 (764)
Q Consensus 273 ~~~~ 276 (764)
.+..
T Consensus 447 ~~~~ 450 (502)
T 3hbx_A 447 LPSR 450 (502)
T ss_dssp CC--
T ss_pred Cccc
Confidence 6643
No 25
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.87 E-value=5.7e-21 Score=216.63 Aligned_cols=244 Identities=16% Similarity=0.129 Sum_probs=181.6
Q ss_pred hhhHhhcCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHHHHHHHHhhcccCcccc-CCchHHH
Q psy13453 484 PGYLASLVPGEMPEEGEDWRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWL-SSPACTE 562 (764)
Q Consensus 484 p~~l~~~l~~~lP~~g~~~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~-~sp~~t~ 562 (764)
|+.++...+..+| +.+-.++++.+.+....+...+.+..|++- ..+...+.++.++.....+.+..... .++...+
T Consensus 31 p~~~~~~~~~~lp--~~~e~~~~~~~~~l~~~~~~~~~~~~~lg~-~~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~ 107 (474)
T 1wyu_B 31 PKEHLREVPPRLP--EVDELTLVRHYTGLSRRQVGVDTTFYPLGS-CTMKYNPKLHEEAARLFADLHPYQDPRTAQGALR 107 (474)
T ss_dssp CGGGBCSSCCCCC--CCCHHHHHHHHHHHHTTCCCTTTSCCCBTT-TCCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHH
T ss_pred CHHHhccCCCCCC--CCCHHHHHHHHHHHHhCCCCcccCcccccc-ccccCCHHHHHHHHHHHHhcCCCCchhhChHHHH
Confidence 3445444445688 788899999999977666544556677773 23333355555555443232332333 5888899
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccc-cCceEEEecCCcc
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDI-RNKLVAYTSDQSN 641 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~-~~~~vi~~S~~aH 641 (764)
++.++.+|+++++|++. ..++|+|||++++.|++++|...... +. .++..|++++.+|
T Consensus 108 l~~~l~~~la~~~g~~~----------~~~~~~ggt~a~~~al~~~~~~~~~~-----------Gd~~~r~~Vlv~~~~h 166 (474)
T 1wyu_B 108 LMWELGEYLKALTGMDA----------ITLEPAAGAHGELTGILIIRAYHEDR-----------GEGRTRRVVLVPDSAH 166 (474)
T ss_dssp HHHHHHHHHHHHHTCSE----------EECCCSSHHHHHHHHHHHHHHHHHHT-----------TCTTTCCEEEEETTSC
T ss_pred HHHHHHHHHHHHHCCCc----------eeecChHHHHHHHHHHHHHHHHHHhc-----------CCccCCCEEEEeCCcC
Confidence 99999999999999864 35688999999999999988653321 11 1234678899999
Q ss_pred hhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc-ccHHHHHHHHHhcCCEEEEe
Q psy13453 642 SSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF-DNLEELGPICQEYNIWLHVD 720 (764)
Q Consensus 642 ~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai-Dpl~eIa~i~~~~glwLHVD 720 (764)
.+..+++...|++++.||++++|++|+++|+++|.++ +.+|+++.++ .+|.+ +|+++|+++|++||+|+|+|
T Consensus 167 ~~~~~~~~~~G~~vv~v~~~~~~~~d~~~L~~~i~~~------t~~v~~~~pn-~~G~~~~~l~~i~~l~~~~g~~li~D 239 (474)
T 1wyu_B 167 GSNPATASMAGYQVREIPSGPEGEVDLEALKRELGPH------VAALMLTNPN-TLGLFERRILEISRLCKEAGVQLYYD 239 (474)
T ss_dssp THHHHHHHHTTCEEEEECBCTTSSBCHHHHHHHCSTT------EEEEEECSSC-TTSCCCTTHHHHHHHHHHHTCEEEEE
T ss_pred hhhHHHHHHCCCEEEEecCCCCCCcCHHHHHHhhCCC------ceEEEEECCC-CCcccCCCHHHHHHHHHHcCCEEEEe
Confidence 9999999999999999999999999999999998654 3477778775 59999 89999999999999999999
Q ss_pred ccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc-----Cceee
Q psy13453 721 AAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF-----DCSAM 763 (764)
Q Consensus 721 aA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~-----~~g~l 763 (764)
+||+.+.. ...+..-. .+|.+++|+||+++.|+ ++|++
T Consensus 240 ea~~~~~~--g~~~~~~~---g~di~~~s~~K~~~~p~g~gG~~~G~~ 282 (474)
T 1wyu_B 240 GANLNAIM--GWARPGDM---GFDVVHLNLHKTFTVPHGGGGPGSGPV 282 (474)
T ss_dssp GGGGGGTT--TTCCHHHH---TCSEEECCTTTTTCCCCTTSCCCCCCE
T ss_pred Cchhhhhc--cCCCcccC---CCcEEEEeCccccccCCCCCCCCeEEE
Confidence 99976553 11111111 36999999999999997 47765
No 26
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.86 E-value=6.7e-22 Score=224.68 Aligned_cols=259 Identities=16% Similarity=0.145 Sum_probs=183.6
Q ss_pred ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCC-CCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCchhh
Q psy13453 11 AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPD-SEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLNAP 88 (764)
Q Consensus 11 ~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~-~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~~i 88 (764)
.+.++. .|+|+.++++++|+.. +.||+++ ++++|+++|+++|+++ |.+ +.+.+++++|.++|+++|
T Consensus 161 Vi~~~~---~h~~~~~~~~~~G~~~---~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~l~~i 228 (497)
T 3mc6_A 161 IIAPVT---AHAGFDKAAYYFGMKL---RHVELDPTTYQVDLGKVKKFINKN------TVLLVGSAPNFPHGIADDIEGL 228 (497)
T ss_dssp EEEETT---SCHHHHHHHHHSCCEE---EEECBCTTTCSBCTTTTGGGCCSS------EEEEEEETTCTTTCCCCSCTTT
T ss_pred EEEeCC---ccHHHHHHHHHcCCeE---EEEecCcccCcCCHHHHHHHHhhC------CEEEEEECCCCCCCcCCCHHHH
Confidence 556666 7999999999999976 9999997 8999999999999753 445 799999999999999998
Q ss_pred hc-----CCCceeccccc--------------------------------ccc------ceeeeecCCCcccccccccc-
Q psy13453 89 VS-----NGPLKVGGVLR--------------------------------RVY------SSCLVPRGQKSLRTTVLFHF- 124 (764)
Q Consensus 89 a~-----~~wlHVDa~l~--------------------------------~~y------~s~ll~rd~~~l~~~~s~~~- 124 (764)
++ ++|+|||++.. +++ +++++++++......+....
T Consensus 229 ~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~ 308 (497)
T 3mc6_A 229 GKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPA 308 (497)
T ss_dssp TTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTT
T ss_pred HHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhccccc
Confidence 87 89999999632 011 13444444322221111111
Q ss_pred ----ccCCcccCCCC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEeCCCCceeEEEEeecccc
Q psy13453 125 ----LFQHWQIPLGR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQ-DDRFELVCPPSMGLVCFRLKVRFW 198 (764)
Q Consensus 125 ----d~~d~tle~SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~-~p~~ell~~P~l~iV~Fry~P~~~ 198 (764)
.+.++++.++| +...+.+|++++.+|.+||.+++++..++++++++.|++ .|+++++.+|..++++|+..
T Consensus 309 ~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~---- 384 (497)
T 3mc6_A 309 WTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSK---- 384 (497)
T ss_dssp CTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECT----
T ss_pred ccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCC----
Confidence 23566777777 444567999999999999999999999999999999999 69999999999999999742
Q ss_pred ccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHccCCCCC
Q psy13453 199 DKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLRGKSLGP 278 (764)
Q Consensus 199 ~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~~~~~~~ 278 (764)
+.+ ..++.++|.++|+.+- ..+.+..+|++++ .+++++++.+++.|+++.+++.+.+..+
T Consensus 385 ------------~~~--~~~l~~~L~~~Gi~v~---~~~~~~~~ri~~~--~~t~e~i~~~~~~L~~~l~~~~~~~~~~- 444 (497)
T 3mc6_A 385 ------------TLN--IHELSDRLSKKGWHFN---ALQKPVALHMAFT--RLSAHVVDEICDILRTTVQELKSESNSK- 444 (497)
T ss_dssp ------------TTT--HHHHHHHHHTTTCBCE---ECCSSCCEEEECC--TTTTCTHHHHHHHHHHHHHHHTCC-----
T ss_pred ------------CCC--HHHHHHHHHhCCEEEe---cCCCCCeEEEEEe--CCCHHHHHHHHHHHHHHHHHHHhCcCcC-
Confidence 111 2578899999998432 3344557899888 5688999999999999998887655332
Q ss_pred CCcccCccchhhccccCCCcchhhccccc
Q psy13453 279 AGKVMGGAQAIAGTESSGPADQVLGEIQP 307 (764)
Q Consensus 279 ~~~~~~~~~a~~g~~~~~pd~~~~~~~~~ 307 (764)
+..++.+|+||+++++|+|++|++|.-
T Consensus 445 --~~~~~~~a~~~~~~~~~~~~~~~~~~~ 471 (497)
T 3mc6_A 445 --PSPDGTSALYGVAGSVKTAGVADKLIV 471 (497)
T ss_dssp ---------------------CCTHHHHH
T ss_pred --CCCCCCCccccccccCCChHHHHHHHH
Confidence 234667999999999999999988765
No 27
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.82 E-value=2.4e-19 Score=199.50 Aligned_cols=239 Identities=18% Similarity=0.138 Sum_probs=161.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCccccccCCCCCh----HHHHHHH---HHHhhcccCccccCCch------
Q psy13453 493 GEMPEEGEDWRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSY----PSIVGDM---LSGAFGLIGFSWLSSPA------ 559 (764)
Q Consensus 493 ~~lP~~g~~~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~----~~~lad~---l~~~lN~n~~~~~~sp~------ 559 (764)
..+|++|.+-+.|--.+.+.-..+++++. +++--|--. ..+++.- +...+.-.++.-+.-|.
T Consensus 39 r~~P~~g~~d~~ie~~l~~la~mdsnn~~-----~~~g~GERE~Rv~s~lv~rrh~~~~HGiGRSGd~~~~QPKAaGssl 113 (501)
T 3hl2_A 39 GKCPENGWDESTLELFLHELAIMDSNNFL-----GNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSL 113 (501)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHTTBGGGCS-----SCCCCSSCCCCCSCHHHHHHTTTCCSCBSCSSCTTCCCTTBHHHHH
T ss_pred CCCCccCCCHHHHHHHHHHHHhhccCCCc-----ccCCcccchHHHHHHHHHhhccCcccCCCCccccccCCCCccchHH
Confidence 36899999977777777766555544332 222111111 1112111 11123333444444442
Q ss_pred -HHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecC
Q psy13453 560 -CTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSD 638 (764)
Q Consensus 560 -~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~ 638 (764)
...-|..+++||+.+ |+|.. +..++++|+|-+++..++++..+..+. ...|+++.
T Consensus 114 l~~ltn~l~ld~L~~~-G~~~~--------~~~flVnGsTgg~lamilaa~r~~rpg---------------~d~VIvpR 169 (501)
T 3hl2_A 114 LNKITNSLVLDIIKLA-GVHTV--------ANCFVVPMATGMSLTLCFLTLRHKRPK---------------AKYIIWPR 169 (501)
T ss_dssp HHHHHHHHHHHHHHHT-TCTTC--------CEEEEESSCHHHHHHHHHHHHHHHCTT---------------CCEEEEEC
T ss_pred HHHHHHHHHHHHHHHc-CCCCC--------CcEEEECcHHHHHHHHHHHHcCcccCC---------------CCEEEEec
Confidence 234577888999998 99975 467889999966666665554432110 12466799
Q ss_pred CcchhHHHHHHhCCCceEEEec---CCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCC-ccccccHHHHHHHHHhcC
Q psy13453 639 QSNSSVEKSAIIGDVPVRQLRS---DDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTG-TCAFDNLEELGPICQEYN 714 (764)
Q Consensus 639 ~aH~Sv~kAa~~lGl~v~~Vp~---d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~-~GaiDpl~eIa~i~~~~g 714 (764)
.+|.|+.||+.++|+..+.|+. ++...||+++|+++|++. |...++++++.-|+. .+.+|||++|+++|++||
T Consensus 170 n~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~---ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~g 246 (501)
T 3hl2_A 170 IDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQEL---GPDCILCIHSTTSCFAPRVPDRLEELAVICANYD 246 (501)
T ss_dssp CCCHHHHHHHHHTTCEEEEECEEEETTEEEECHHHHHHHHHHH---CGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHcCCeEEEEeeeecccccCCCHHHHHHHHHhc---CCCcEEEEEecCCCCCCcccccHHHHHHHHHHcC
Confidence 9999999999999999888876 456899999999999986 222344444444443 457799999999999999
Q ss_pred CEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 715 IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 715 lwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+|+|||.|||+.+.++++.....-...+||.++.|+||++.+|.+++++
T Consensus 247 IpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvpIGG~ii 295 (501)
T 3hl2_A 247 IPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAII 295 (501)
T ss_dssp CCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCCSSCEEE
T ss_pred CeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccceeecCceEE
Confidence 9999999999987665442221111236899999999999999998875
No 28
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.73 E-value=2.8e-17 Score=180.25 Aligned_cols=203 Identities=18% Similarity=0.087 Sum_probs=157.8
Q ss_pred CCCCCccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChH
Q psy13453 519 HWQSPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTAS 598 (764)
Q Consensus 519 ~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgT 598 (764)
...+|.++-+.+++...+..+.+.+...+ . ...+|....+..++.+++++++|.+.. ...++|+|||
T Consensus 8 ~~~~~~~~~~~pgp~~~~~~v~~a~~~~~---~--~~~~~~~~~~~~~~~~~la~~~~~~~~--------~~v~~~~sgt 74 (411)
T 3nnk_A 8 QLNPPSRLLMGPGPINADPRVLRAMSSQL---I--GQYDPAMTHYMNEVMALYRGVFRTENR--------WTMLVDGTSR 74 (411)
T ss_dssp SCCCCCCEEESSSCCCCCHHHHHHHTSCC---C--CTTCHHHHHHHHHHHHHHHHHHTCCCS--------EEEEEESCHH
T ss_pred ccCCccceeecCCCCCCCHHHHHHhhccc---c--ccccHHHHHHHHHHHHHHHHHhCCCCC--------cEEEECCCcH
Confidence 35577777787776655554444443322 1 123677778899999999999998753 2367889999
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh--HHHHHHhCCCceEEEecCCCCcccHHHHHHHHH
Q psy13453 599 EATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS--VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVK 676 (764)
Q Consensus 599 eANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S--v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~ 676 (764)
+++..++.+.. . ++..|+++..+|++ +.+++...|.+++.||++.++.+|+++|+++|+
T Consensus 75 ~al~~~~~~~~----~---------------~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~ 135 (411)
T 3nnk_A 75 AGIEAILVSAI----R---------------PGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVK 135 (411)
T ss_dssp HHHHHHHHHHC----C---------------TTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHhc----C---------------CCCEEEEecCCchHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHh
Confidence 99988887551 1 12257788899988 888889999999999999999999999999998
Q ss_pred HhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC
Q psy13453 677 EDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 677 ~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~ 756 (764)
+. .+.+|+++.+++.+|.+.|+++|+++|++||+|+|+|+|++.+....+. ... .+|.++.++|||++.
T Consensus 136 ~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~-----~~~-~~d~~~~s~~K~l~~ 204 (411)
T 3nnk_A 136 RI-----RPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLET-----DVW-GLDAVSAGMQKCLGG 204 (411)
T ss_dssp HH-----CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCT-----TTT-TCSEEECCSTTTTCC
T ss_pred hC-----CCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccch-----hcc-CCcEEEecCccccCC
Confidence 63 2558888999999999999999999999999999999998875443221 111 369999999999999
Q ss_pred CcCceeeC
Q psy13453 757 NFDCSAMW 764 (764)
Q Consensus 757 P~~~g~l~ 764 (764)
|.++|+++
T Consensus 205 ~~g~g~~~ 212 (411)
T 3nnk_A 205 PSGTSPIT 212 (411)
T ss_dssp CSSEEEEE
T ss_pred CCceEEEE
Confidence 99998864
No 29
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.72 E-value=1.2e-16 Score=175.49 Aligned_cols=202 Identities=16% Similarity=0.082 Sum_probs=154.2
Q ss_pred CCCCCccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEE-EeCCh
Q psy13453 519 HWQSPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGI-IQSTA 597 (764)
Q Consensus 519 ~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~Gv-fTsGg 597 (764)
...+|+++.+.+++...+..+.+.+.. . .....++....+..++.+++++++|.+.+ ..+ +|+||
T Consensus 6 ~~~~~~~~~~~p~p~~~~~~v~~a~~~---~--~~~~~~~~~~~~~~~l~~~la~~~g~~~~---------~~~~~~~s~ 71 (416)
T 3isl_A 6 ELCTPLRTIMTPGPVEVDPRVLRVMST---P--VVGQFDPAFTGIMNETMEMLRELFQTKNR---------WAYPIDGTS 71 (416)
T ss_dssp CCCCCCCEECSSSSCCCCHHHHHHTTS---C--CCCTTSHHHHHHHHHHHHHHHHHTTCCCS---------EEEEEESCH
T ss_pred ccCcccceeecCCCcCcCHHHHHHhcc---c--CCCCccHHHHHHHHHHHHHHHHHhCCCCC---------cEEEecCcH
Confidence 345667777776665554444333332 1 12234466788899999999999998753 344 88999
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh--HHHHHHhCCCceEEEecCCCCcccHHHHHHHH
Q psy13453 598 SEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS--VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAV 675 (764)
Q Consensus 598 TeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S--v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I 675 (764)
|+++..++.+. .. ++..|++++.+|++ +.+++...|.+++.||++.++.+|+++|+++|
T Consensus 72 t~al~~~~~~l----~~---------------~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i 132 (416)
T 3isl_A 72 RAGIEAVLASV----IE---------------PEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREI 132 (416)
T ss_dssp HHHHHHHHHHH----CC---------------TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHh----cC---------------CCCEEEEecCCcccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHH
Confidence 99988877644 11 12257778889988 77889999999999999999999999999999
Q ss_pred HHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCC
Q psy13453 676 KEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLL 755 (764)
Q Consensus 676 ~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~ 755 (764)
++. .+.+|+.+..++.+|.+.|+++|+++|++||+|+|+|++|+.+....+- ... .+|.++.++|||++
T Consensus 133 ~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-----~~~-~~d~~~~s~~K~l~ 201 (416)
T 3isl_A 133 KKV-----KPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKV-----DEW-KIDAAIGGTQKCLS 201 (416)
T ss_dssp HHH-----CCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCT-----TTT-TCSEEECCSSSTTC
T ss_pred hhC-----CCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcch-----hhc-CCCEEEecCccccC
Confidence 853 2458889999999999999999999999999999999999865443321 111 36999999999999
Q ss_pred CCcCceeeC
Q psy13453 756 VNFDCSAMW 764 (764)
Q Consensus 756 ~P~~~g~l~ 764 (764)
.|.++|+++
T Consensus 202 g~~g~g~~~ 210 (416)
T 3isl_A 202 VPSGMAPIT 210 (416)
T ss_dssp CCSSEEEEE
T ss_pred CCCCeEEEE
Confidence 999999864
No 30
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.72 E-value=7.9e-17 Score=173.90 Aligned_cols=202 Identities=14% Similarity=0.092 Sum_probs=152.8
Q ss_pred cccccCCCCChHHHHHHHHHHh---hcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHH
Q psy13453 525 FNAYFPTGSSYPSIVGDMLSGA---FGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEAT 601 (764)
Q Consensus 525 ~~~~~~~~~~~~~~lad~l~~~---lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeAN 601 (764)
|+++..+++.++.++..+.... +.+....+..+.....+..++.+++++++|.+++ ..+||+|||+++
T Consensus 3 yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~---------~i~~~~g~~~a~ 73 (382)
T 4hvk_A 3 YFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGG---------TVVFTSGATEAN 73 (382)
T ss_dssp BCBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTE---------EEEEESSHHHHH
T ss_pred eecCCCcCCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcC---------eEEEECCchHHH
Confidence 6677666666665544333322 2222223444556778889999999999998653 589999999999
Q ss_pred HHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHh---CCCceEEEecCCCCcccHHHHHHHHHHh
Q psy13453 602 LVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAII---GDVPVRQLRSDDNGVLRGDALLTAVKED 678 (764)
Q Consensus 602 l~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~---lGl~v~~Vp~d~~g~md~~~Le~~I~~~ 678 (764)
..++.+....... ++..|+++..+|.+...++.. .|++++.||+++++.+|+++|+++|++.
T Consensus 74 ~~~~~~~~~~~~~---------------~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~ 138 (382)
T 4hvk_A 74 NLAIIGYAMRNAR---------------KGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDD 138 (382)
T ss_dssp HHHHHHHHHHHGG---------------GCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCTT
T ss_pred HHHHHHhhhhhcC---------------CCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhccC
Confidence 9888876543211 123588899999999887766 5999999999999999999999998653
Q ss_pred hhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc
Q psy13453 679 LAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 679 ~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~ 758 (764)
+.+|+.+..++.+|.+.|+++|+++|++||+ +|+|+||+.+....+... . .+|.++.++||++ .|.
T Consensus 139 ------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~---~---~~d~~~~s~~K~~-g~~ 204 (382)
T 4hvk_A 139 ------TILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEK---I---GADMLTISSNDIY-GPK 204 (382)
T ss_dssp ------EEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHH---H---TCSEEEEESGGGT-SCT
T ss_pred ------ceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchh---c---CCCEEEEeHHHhc-CCC
Confidence 4588899999999999999999999999999 999999987654332111 1 2599999999975 477
Q ss_pred CceeeC
Q psy13453 759 DCSAMW 764 (764)
Q Consensus 759 ~~g~l~ 764 (764)
|+|+++
T Consensus 205 g~g~~~ 210 (382)
T 4hvk_A 205 GVGALW 210 (382)
T ss_dssp TCEEEE
T ss_pred ceEEEE
Confidence 888764
No 31
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.72 E-value=3.6e-17 Score=174.94 Aligned_cols=170 Identities=15% Similarity=0.073 Sum_probs=135.8
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
.++.....+.++.+++++++|.+.+ ....+||+|||+++..++.+.+. ..|+
T Consensus 27 ~~~~~~~~~~~l~~~la~~~g~~~~-------~~~v~~t~g~t~a~~~~~~~~~~---------------------d~vl 78 (353)
T 2yrr_A 27 LDPEVLRVNRAIQERLAALFDPGEG-------ALVAALAGSGSLGMEAGLANLDR---------------------GPVL 78 (353)
T ss_dssp TCHHHHHHHHHHHHHHHHHHCCCTT-------CEEEEESSCHHHHHHHHHHTCSC---------------------CCEE
T ss_pred cCHHHHHHHHHHHHHHHHHhCCCCC-------CceEEEcCCcHHHHHHHHHHhcC---------------------CcEE
Confidence 3567778899999999999998621 13588999999999888764421 1266
Q ss_pred ecCCcchh--HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc
Q psy13453 636 TSDQSNSS--VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY 713 (764)
Q Consensus 636 ~S~~aH~S--v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~ 713 (764)
+++.+|++ +.+++...|++++.||+++++.+|+++|+++|++. .+.+|+.+..++.+|.+.|+++|+++|++|
T Consensus 79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~i~~l~~~~ 153 (353)
T 2yrr_A 79 VLVNGAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRR-----RYRMVALVHGETSTGVLNPAEAIGALAKEA 153 (353)
T ss_dssp EEECSHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHS-----CCSEEEEESEETTTTEECCHHHHHHHHHHH
T ss_pred EEcCCCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhC-----CCCEEEEEccCCCcceecCHHHHHHHHHHc
Confidence 77778887 45667889999999999989999999999999762 245888899999999999999999999999
Q ss_pred CCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 714 NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 714 glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
|+|+|+|+||+.+....+ ... + .+|.+++++|||++.|.|+|+++
T Consensus 154 ~~~li~D~a~~~~~~~~~-~~~----~-~~d~~~~s~~K~~~~~~g~G~~~ 198 (353)
T 2yrr_A 154 GALFFLDAVTTLGMLPFS-MRA----M-GVDYAFTGSQKCLSAPPGLAPIA 198 (353)
T ss_dssp TCEEEEECTTTTTTSCCC-HHH----H-TCSEEECCTTSTTCCCSSCEEEE
T ss_pred CCeEEEEcCccccccccc-ccc----c-CceEEEecCcccccCCCceEEEE
Confidence 999999999975433221 111 1 25999999999999999998864
No 32
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.71 E-value=1.7e-16 Score=172.10 Aligned_cols=202 Identities=13% Similarity=0.066 Sum_probs=150.4
Q ss_pred cccccCCCCChHHHHHHHHHHhhc--ccC-ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHH
Q psy13453 525 FNAYFPTGSSYPSIVGDMLSGAFG--LIG-FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEAT 601 (764)
Q Consensus 525 ~~~~~~~~~~~~~~lad~l~~~lN--~n~-~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeAN 601 (764)
|+++-.+++.++.++..+....-+ .+. ..|..++.......++.+++++++|.+++ ..+||+|||+|+
T Consensus 3 yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~---------~v~~~~g~t~a~ 73 (382)
T 4eb5_A 3 YFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGG---------TVVFTSGATEAN 73 (382)
T ss_dssp BCBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTE---------EEEEESSHHHHH
T ss_pred eeccCCCCCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCC---------eEEEcCchHHHH
Confidence 666666666666654443333221 111 12444456678889999999999998642 589999999999
Q ss_pred HHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHh---CCCceEEEecCCCCcccHHHHHHHHHHh
Q psy13453 602 LVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAII---GDVPVRQLRSDDNGVLRGDALLTAVKED 678 (764)
Q Consensus 602 l~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~---lGl~v~~Vp~d~~g~md~~~Le~~I~~~ 678 (764)
..++.+.+..+... +..|++++.+|.++..++.. .|++++.||+++++.+|+++|+++|+++
T Consensus 74 ~~~~~~l~~~~~~~---------------gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~ 138 (382)
T 4eb5_A 74 NLAIIGYAMRNARK---------------GKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDD 138 (382)
T ss_dssp HHHHHHHHHHHGGG---------------CCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCTT
T ss_pred HHHHHHHHhhccCC---------------CCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcCC
Confidence 99988776432111 22578899999999888765 6889999999989999999999988642
Q ss_pred hhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc
Q psy13453 679 LAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 679 ~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~ 758 (764)
+.+|+.+..++.+|.+.|+++|+++|++||+| |+|+||+.+....+ ... . .+|.++.++||++ .|.
T Consensus 139 ------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~-~~~----~-~~di~~~s~sK~~-g~~ 204 (382)
T 4eb5_A 139 ------TILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVD-VEK----I-GADMLTISSNDIY-GPK 204 (382)
T ss_dssp ------EEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCC-HHH----H-TCSEEEEETGGGT-CCS
T ss_pred ------CeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccC-ccc----c-CCCEEEeehHHhc-CCC
Confidence 45888899999999999999999999999999 99999985433221 111 1 3599999999985 577
Q ss_pred CceeeC
Q psy13453 759 DCSAMW 764 (764)
Q Consensus 759 ~~g~l~ 764 (764)
|+|+++
T Consensus 205 g~G~~~ 210 (382)
T 4eb5_A 205 GVGALW 210 (382)
T ss_dssp SCEEEE
T ss_pred ceEEEE
Confidence 888763
No 33
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.71 E-value=1.3e-16 Score=173.20 Aligned_cols=199 Identities=12% Similarity=0.013 Sum_probs=152.0
Q ss_pred CccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHH
Q psy13453 523 PQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATL 602 (764)
Q Consensus 523 P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl 602 (764)
..|+++-..+...+.+. +.+...+.. ..++....+..++.+++++++|.++. ...++|+|||+|+.
T Consensus 20 ~~~l~~~~~~~~~~~v~-~a~~~~~~~-----~~~~~~~~~~~~~~~~la~~~g~~~~--------~~v~~~~g~t~a~~ 85 (386)
T 2dr1_A 20 KYKLFTAGPVACFPEVL-EIMKVQMFS-----HRSKEYRKVHMDTVERLREFLEVEKG--------EVLLVPSSGTGIME 85 (386)
T ss_dssp CSEECCSSSCCCCHHHH-HHTTSCCCC-----TTSHHHHHHHHHHHHHHHHHHTCSSS--------EEEEESSCHHHHHH
T ss_pred cceeecCCCcCCcHHHH-HHHhccccc-----ccCHHHHHHHHHHHHHHHHHhCCCCC--------cEEEEeCChHHHHH
Confidence 45677655555454433 333333321 23455688999999999999998721 24789999999998
Q ss_pred HHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh--HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhh
Q psy13453 603 VSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS--VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLA 680 (764)
Q Consensus 603 ~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S--v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~ 680 (764)
.++.+.. . ++..|++++.+|++ +.+++...|.+++.+|++.++.+|+++|+++|++.
T Consensus 86 ~~~~~l~----~---------------~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~-- 144 (386)
T 2dr1_A 86 ASIRNGV----S---------------KGGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKN-- 144 (386)
T ss_dssp HHHHHHS----C---------------TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHC--
T ss_pred HHHHHhh----c---------------CCCeEEEEcCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcC--
Confidence 8887541 1 12257788889988 88888999999999999988999999999999652
Q ss_pred cCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCc
Q psy13453 681 KGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDC 760 (764)
Q Consensus 681 ~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~ 760 (764)
..+.+|+++..++.+|.+.|+++|+++|++||+|+|+|+||+.+....+ +... .+|.++.++||+++.|.++
T Consensus 145 --~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~di~~~s~sK~~~~~~g~ 216 (386)
T 2dr1_A 145 --PDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIK-----FDKW-GLDVVFSSSQKAFGVPPGL 216 (386)
T ss_dssp --TTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCSEEEEETTSTTCCCSSC
T ss_pred --CCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCcccc-----cccc-CCcEEEEeccccccCCCce
Confidence 1356888889999999999999999999999999999999987654221 1212 4699999999999999888
Q ss_pred eeeC
Q psy13453 761 SAMW 764 (764)
Q Consensus 761 g~l~ 764 (764)
|+++
T Consensus 217 G~~~ 220 (386)
T 2dr1_A 217 AIGA 220 (386)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8864
No 34
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.70 E-value=1.5e-16 Score=175.63 Aligned_cols=204 Identities=19% Similarity=0.186 Sum_probs=154.1
Q ss_pred CccccccCCCCChHHHHHHHHHHhhc--cc-C---c-cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeC
Q psy13453 523 PQFNAYFPTGSSYPSIVGDMLSGAFG--LI-G---F-SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQS 595 (764)
Q Consensus 523 P~~~~~~~~~~~~~~~lad~l~~~lN--~n-~---~-~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTs 595 (764)
..|+++..+++.++.++.. +...+. .. . . .+..+........++.+++++++|.+.+ ..+||+
T Consensus 23 ~iyld~~~~~~~~~~v~~a-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~---------~v~~~~ 92 (423)
T 3lvm_A 23 PIYLDYSATTPVDPRVAEK-MMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR---------EIVFTS 92 (423)
T ss_dssp SEECBTTTCCCCCHHHHHH-HTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGG---------GEEEES
T ss_pred CEeecCCCcCCCCHHHHHH-HHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCC---------eEEEeC
Confidence 3577777666555555443 333332 11 1 1 2333445667888899999999998753 589999
Q ss_pred ChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhC---CCceEEEecCCCCcccHHHHH
Q psy13453 596 TASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIG---DVPVRQLRSDDNGVLRGDALL 672 (764)
Q Consensus 596 GgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~l---Gl~v~~Vp~d~~g~md~~~Le 672 (764)
|||+|+..++.+.++.+.+ ++..|+++..+|.+...++..+ |++++.+|+++++.+|+++|+
T Consensus 93 ggt~a~~~a~~~l~~~~~~---------------~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~ 157 (423)
T 3lvm_A 93 GATESDNLAIKGAANFYQK---------------KGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELE 157 (423)
T ss_dssp SHHHHHHHHHHHHHHHHTT---------------TCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHH
T ss_pred ChHHHHHHHHHHHHHhhcc---------------CCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHH
Confidence 9999999999877654321 1235888999999998887554 999999999999999999999
Q ss_pred HHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCc
Q psy13453 673 TAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHK 752 (764)
Q Consensus 673 ~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK 752 (764)
++|++. +.+|+++..++.+|.+.|+++|+++|++||+|+++|+||+++..... +... .+|.++.++||
T Consensus 158 ~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~-----~~~~-~~di~~~s~sK 225 (423)
T 3lvm_A 158 AAMRDD------TILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPID-----LSQL-KVDLMSFSGHK 225 (423)
T ss_dssp HHCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCC-----TTTS-CCSEEEEESTT
T ss_pred HhcCCC------cEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcC-----hhhc-CCCEEEechHH
Confidence 998653 55888888999999999999999999999999999999988654322 1111 36999999999
Q ss_pred cCCCCcCceeeC
Q psy13453 753 WLLVNFDCSAMW 764 (764)
Q Consensus 753 ~l~~P~~~g~l~ 764 (764)
+ +.|.++|+++
T Consensus 226 ~-~g~~g~G~~~ 236 (423)
T 3lvm_A 226 I-YGPKGIGALY 236 (423)
T ss_dssp T-TSCSSCEEEE
T ss_pred h-cCCCCeEEEE
Confidence 5 4577888764
No 35
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.70 E-value=2.4e-16 Score=171.93 Aligned_cols=200 Identities=14% Similarity=0.042 Sum_probs=149.8
Q ss_pred CCCccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHH
Q psy13453 521 QSPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEA 600 (764)
Q Consensus 521 ~~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeA 600 (764)
.++.|+++...+..++.++. .+...+.. ..++.......++.+++++++|.++ ...+||+|||++
T Consensus 7 ~~~~yl~~~~~~~~~~~v~~-a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~---------~~v~~t~g~t~a 71 (392)
T 2z9v_A 7 ADPVITLTAGPVNAYPEVLR-GLGRTVLY-----DYDPAFQLLYEKVVDKAQKAMRLSN---------KPVILHGEPVLG 71 (392)
T ss_dssp SCCSEECSSSCCCCCHHHHH-HTTSCCCC-----TTSHHHHHHHHHHHHHHHHHTTCSS---------CCEEESSCTHHH
T ss_pred CCcceeecCCCcCCCHHHHH-HHhccccc-----cccHHHHHHHHHHHHHHHHHhCCCC---------CEEEEeCCchHH
Confidence 35577777655555554443 33333322 1246667788889999999999864 257999999999
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH--HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHh
Q psy13453 601 TLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV--EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKED 678 (764)
Q Consensus 601 Nl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv--~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~ 678 (764)
+..++.+.. . ++..|++++.+|++. .+.+...|.+++.+|+++++.+|+++|+++|++.
T Consensus 72 ~~~~~~~~~----~---------------~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~ 132 (392)
T 2z9v_A 72 LEAAAASLI----S---------------PDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAH 132 (392)
T ss_dssp HHHHHHHHC----C---------------TTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHC
T ss_pred HHHHHHHhc----C---------------CCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcC
Confidence 988887651 1 112477788888875 3444557999999999988999999999999752
Q ss_pred hhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc
Q psy13453 679 LAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 679 ~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~ 758 (764)
..+.+|+.+..++.+|.+.|+++|+++|++||+|+|+|+||+.+....+ +... .+|.++.++|||++.|.
T Consensus 133 ----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~-----~~~~-~~d~~~~s~sK~~~~~~ 202 (392)
T 2z9v_A 133 ----PEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTH-----PEDC-KADIYVTGPNKCLGAPP 202 (392)
T ss_dssp ----TTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCC-----GGGG-TCSEEEECSSSTTCCCS
T ss_pred ----CCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccc-----cccc-cceEEEecCcccccCCC
Confidence 1255888899999999999999999999999999999999986544322 1111 35999999999999999
Q ss_pred CceeeC
Q psy13453 759 DCSAMW 764 (764)
Q Consensus 759 ~~g~l~ 764 (764)
|+|+++
T Consensus 203 g~G~l~ 208 (392)
T 2z9v_A 203 GLTMMG 208 (392)
T ss_dssp CCEEEE
T ss_pred ceeEEE
Confidence 988764
No 36
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.70 E-value=1.4e-16 Score=174.27 Aligned_cols=207 Identities=15% Similarity=0.064 Sum_probs=152.7
Q ss_pred CCCCccccccCCCCChHHHHHHHH---HHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCC
Q psy13453 520 WQSPQFNAYFPTGSSYPSIVGDML---SGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQST 596 (764)
Q Consensus 520 ~~~P~~~~~~~~~~~~~~~lad~l---~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsG 596 (764)
..+..|+++...++.++.++..+. ...+.+....+..+.....+..++.+++++++|.+++ ..+||+|
T Consensus 18 ~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~---------~v~~~~g 88 (400)
T 3vax_A 18 GSHMTYLDAAATTRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPD---------ELIFTSG 88 (400)
T ss_dssp ----CCCCCCCCSSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGG---------GEEEESC
T ss_pred cCCcEEecCCCCCCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCC---------cEEEeCC
Confidence 344567887766665555443332 2222222223344455677788899999999998753 6899999
Q ss_pred hHHHHHHHHHHHHHHHhhhhccCCCCCccccccCce-EEEecCCcchhHHHHHHh---CCCceEEEecCCCCcccHHHHH
Q psy13453 597 ASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKL-VAYTSDQSNSSVEKSAII---GDVPVRQLRSDDNGVLRGDALL 672 (764)
Q Consensus 597 gTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~-vi~~S~~aH~Sv~kAa~~---lGl~v~~Vp~d~~g~md~~~Le 672 (764)
||+++..++.+.+...... +. .|+++..+|.++..++.. .|.+++.||+++++.+|+++|+
T Consensus 89 ~t~al~~~~~~l~~~~~~~---------------gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~ 153 (400)
T 3vax_A 89 ATESNNIALLGLAPYGERT---------------GRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVM 153 (400)
T ss_dssp HHHHHHHHHHTTHHHHHHH---------------TCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHH
T ss_pred HHHHHHHHHHHHHHhhccC---------------CCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHH
Confidence 9999999888765322111 22 578889999998777665 5889999999999999999999
Q ss_pred HHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCc
Q psy13453 673 TAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHK 752 (764)
Q Consensus 673 ~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK 752 (764)
++|++. +.+|+.+..++.+|.+.|+++|+++|++||+|+++|+||+.+.... .+..+ +|.++.++||
T Consensus 154 ~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~-----~~~~~--~d~~~~s~~K 220 (400)
T 3vax_A 154 ERLRPD------TLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPG-----DLTTP--IDMISISGHK 220 (400)
T ss_dssp TTCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGG-----GGGSC--CSEEEEETGG
T ss_pred HhcCCC------ceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCc-----Chhhc--CcEEEEeHHH
Confidence 988643 5588889999999999999999999999999999999998654322 22333 7999999999
Q ss_pred cCCCCcCceeeC
Q psy13453 753 WLLVNFDCSAMW 764 (764)
Q Consensus 753 ~l~~P~~~g~l~ 764 (764)
++ .|.++|+++
T Consensus 221 ~~-g~~g~g~~~ 231 (400)
T 3vax_A 221 IG-APKGVGALV 231 (400)
T ss_dssp GT-SCSSCEEEE
T ss_pred hC-CCCceEEEE
Confidence 54 588888764
No 37
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.69 E-value=3.1e-16 Score=170.15 Aligned_cols=206 Identities=11% Similarity=-0.032 Sum_probs=148.2
Q ss_pred CccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHH
Q psy13453 523 PQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATL 602 (764)
Q Consensus 523 P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl 602 (764)
|+++.+.+++......+.+.+...+.. + .+|.......++.++++++++.... ......+||+|||+++.
T Consensus 4 ~~~~~~~p~p~~~~~~v~~a~~~~~~~----~-~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~v~~~~g~t~al~ 73 (385)
T 2bkw_A 4 SVDTLLIPGPIILSGAVQKALDVPSLG----H-TSPEFVSIFQRVLKNTRAVFKSAAA-----SKSQPFVLAGSGTLGWD 73 (385)
T ss_dssp CCCEECSSSSCCCCHHHHHTTSCCCCC----T-TSHHHHHHHHHHHHHHHHHTTCCGG-----GTCEEEEEESCTTHHHH
T ss_pred ccceeecCCCcCchHHHHHHHhccccc----c-CCHHHHHHHHHHHHHHHHHhCCCCC-----CCCceEEEcCchHHHHH
Confidence 455666666555544444444433321 2 2666666777788999999987421 01236789999999999
Q ss_pred HHHHHHHHHHhhhhccCCCCCccccccCceEEEe-cCCcchhHHHHHHhCCCceEEEec-CCCCcccHHHHHHHHHHhhh
Q psy13453 603 VSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT-SDQSNSSVEKSAIIGDVPVRQLRS-DDNGVLRGDALLTAVKEDLA 680 (764)
Q Consensus 603 ~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~-S~~aH~Sv~kAa~~lGl~v~~Vp~-d~~g~md~~~Le~~I~~~~~ 680 (764)
.++.+..... .. ++-+++. +...|.++.+++...|.+++.||+ ++++.+|+++|+++|++.
T Consensus 74 ~~~~~~~~~~-----~~----------gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~-- 136 (385)
T 2bkw_A 74 IFASNFILSK-----AP----------NKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQN-- 136 (385)
T ss_dssp HHHHHHSCTT-----CS----------CCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHS--
T ss_pred HHHHHHhccC-----CC----------CCeEEEEcCCcchHHHHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcC--
Confidence 8887652100 00 1223444 445666766778889999999999 888999999999999762
Q ss_pred cCCCceEEEEeeccCCccccccHHHHHHHHHhc--CCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc
Q psy13453 681 KGLIPCCLIATLGTTGTCAFDNLEELGPICQEY--NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 681 ~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~--glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~ 758 (764)
.+.+|+.+..++.+|.+.|+++|+++|++| |+|+|+|+||+.+....+ +... .+|.++.++|||++.|.
T Consensus 137 ---~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~~K~~~~~~ 207 (385)
T 2bkw_A 137 ---SYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFE-----FDEW-GVDFALTASQKAIGAPA 207 (385)
T ss_dssp ---CCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCC-----TTTT-TCSEEEEESSSTTCCCS
T ss_pred ---CCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCcccc-----cccc-CceEEEecCccccccCC
Confidence 244788899999999999999999999999 999999999986543221 1222 36999999999999999
Q ss_pred CceeeC
Q psy13453 759 DCSAMW 764 (764)
Q Consensus 759 ~~g~l~ 764 (764)
|+|+++
T Consensus 208 G~G~~~ 213 (385)
T 2bkw_A 208 GLSISL 213 (385)
T ss_dssp CEEEEE
T ss_pred cceEEE
Confidence 988764
No 38
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.69 E-value=6.6e-17 Score=181.44 Aligned_cols=240 Identities=11% Similarity=0.039 Sum_probs=162.4
Q ss_pred cccccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchh
Q psy13453 8 PKLAYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNA 87 (764)
Q Consensus 8 ~~~~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ 87 (764)
|+.+|+.+ .|.|+.||+.++|+++..|+.++.++.++||+++|+++|+++.. +.++++|+|++++..|++|||++
T Consensus 145 ~~viv~r~----aHkSv~kAl~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~-~~~~~Vv~t~t~~g~g~~ddl~~ 219 (450)
T 3bc8_A 145 KYIIWPRI----DQKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGP-EHILCLHSTTACFAPRVPDRLEE 219 (450)
T ss_dssp CEEEEECC----CCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHCG-GGEEEEEEESSCCTTBCCCCHHH
T ss_pred CEEEEECC----cHHHHHHHHHHcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCC-CCEEEEEEECCcCCCceecCHHH
Confidence 44577755 59999999999999996666666578899999999999998752 23334479999999999999999
Q ss_pred hhc-----CCCceeccccc-------------------------------ccc-ceeeeecCCCccccccccccccCCcc
Q psy13453 88 PVS-----NGPLKVGGVLR-------------------------------RVY-SSCLVPRGQKSLRTTVLFHFLFQHWQ 130 (764)
Q Consensus 88 ia~-----~~wlHVDa~l~-------------------------------~~y-~s~ll~rd~~~l~~~~s~~~d~~d~t 130 (764)
+++ ++|+|||++++ .++ |+++++||++.+... .. .|.
T Consensus 220 Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~-~~--~~~--- 293 (450)
T 3bc8_A 220 LAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDI-SK--MYP--- 293 (450)
T ss_dssp HHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHH-HH--HSC---
T ss_pred HHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHH-HH--Hhh---
Confidence 997 99999999642 112 245666665544322 11 121
Q ss_pred cCCCC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEeCCCCceeE-EEEeeccccccccccc
Q psy13453 131 IPLGR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDD---RFELVCPPSMGLV-CFRLKVRFWDKLDNLF 205 (764)
Q Consensus 131 le~SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p---~~ell~~P~l~iV-~Fry~P~~~~~~~~~~ 205 (764)
+.. ...+|++|++++.+|++||++++++++++|+++++.|++++ +++++..+...+- ++-.. ...
T Consensus 294 --g~~s~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~--~~~------ 363 (450)
T 3bc8_A 294 --GRASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLK--TID------ 363 (450)
T ss_dssp --SCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECT--TTS------
T ss_pred --cCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeecc--ccc------
Confidence 111 34469999999999999999999999999999999999999 9999887754332 22110 000
Q ss_pred cCccCCccHHHHHHHHHHHhcC---cEEE-----------Eece------eCCeeEEEEeccCCCCCHHHHHHHHHHHHH
Q psy13453 206 GTISFGDNDLNKAVYDRIIARK---VIYI-----------VKGS------FQDRLFMRFAICSSQTEESDVQLGWNEIRT 265 (764)
Q Consensus 206 ~~~~~~~d~~n~~L~~~L~~~G---~~~v-----------s~t~------l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~ 265 (764)
...+.| . .+|.-.+...| .-.. .... +-....+= +++.+-.++++++.+++.|++
T Consensus 364 --~~~~~D-~-tkl~i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~-~~~sig~~~~di~~l~~~L~~ 438 (450)
T 3bc8_A 364 --GHHDKA-V-TQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLN-AAAAIGMKMQDVDLFIKRLDK 438 (450)
T ss_dssp --SSSSCH-H-HHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEE-EECCTTCCHHHHHHHHHHHHH
T ss_pred --ccccCC-C-ceeEEEecCCCCccceeeecccccchhHHHHHHcCCeeecCCCCcEE-EEecCCCCHHHHHHHHHHHHH
Confidence 000111 1 23444444444 2222 0000 01122333 256777899999999999999
Q ss_pred HHHHHHcc
Q psy13453 266 ATEEVLRG 273 (764)
Q Consensus 266 ~~~~i~~~ 273 (764)
+.++..++
T Consensus 439 ~~~~~~~~ 446 (450)
T 3bc8_A 439 CLNIVRKE 446 (450)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 97766543
No 39
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.68 E-value=4.5e-16 Score=172.62 Aligned_cols=220 Identities=16% Similarity=0.146 Sum_probs=152.2
Q ss_pred CCccccccCCCCChHHHHHHHHHHhhc---ccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChH
Q psy13453 522 SPQFNAYFPTGSSYPSIVGDMLSGAFG---LIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTAS 598 (764)
Q Consensus 522 ~P~~~~~~~~~~~~~~~lad~l~~~lN---~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgT 598 (764)
...|+++..+++.++.++..+....-+ .....|..++....+..++.+++++++|.+++ ..+||+|||
T Consensus 18 ~~~~Ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~---------~v~~~~g~t 88 (432)
T 3a9z_A 18 RKVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQ---------DIIFTSGGT 88 (432)
T ss_dssp CCEECBTTTCCCCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGG---------GEEEESCHH
T ss_pred CcEEeeCCccCCCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcC---------eEEEeCChH
Confidence 346777766555555554433322211 11223344456778889999999999998653 689999999
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCC--CccccccCceEEEecCCcchhHHHHHHh----CCCceEEEecCC-CCcccHHHH
Q psy13453 599 EATLVSILVAKRKMINHWQSKNPS--LTENDIRNKLVAYTSDQSNSSVEKSAII----GDVPVRQLRSDD-NGVLRGDAL 671 (764)
Q Consensus 599 eANl~Al~aAR~~~~~~~~~~~~~--~~~~~~~~~~vi~~S~~aH~Sv~kAa~~----lGl~v~~Vp~d~-~g~md~~~L 671 (764)
+++..++.+..+.+.......|.. +..+.-.....|+++..+|.|+.++... .|.+++.||+++ ++.+|+++|
T Consensus 89 ~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l 168 (432)
T 3a9z_A 89 ESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDI 168 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHH
T ss_pred HHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHH
Confidence 999999988753221100000000 0011111224688999999999777543 689999999985 889999999
Q ss_pred HHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcC----------CEEEEeccccccccccchhhhhhcCCC
Q psy13453 672 LTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYN----------IWLHVDAAYAGSALLLPEYAHLKRGLE 741 (764)
Q Consensus 672 e~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~g----------lwLHVDaA~Gg~~l~~~~~r~~l~gie 741 (764)
+++|++. +.+|+++..++.+|.+.|+++|+++|++|| +|+|+|+||+.+....+ ... +
T Consensus 169 ~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~-~~~----~- 236 (432)
T 3a9z_A 169 LAAVRPT------TCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVD-VED----L- 236 (432)
T ss_dssp HHTCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCC-HHH----H-
T ss_pred HHhccCC------ceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccC-hhh----c-
Confidence 9988642 558888999999999999999999999999 99999999987543221 111 1
Q ss_pred cccEEEEcCCccCCCCcCceeeC
Q psy13453 742 YVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 742 ~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
.+|.++.++|||++ |. +|+++
T Consensus 237 ~~d~~~~s~~K~~g-~~-~G~~~ 257 (432)
T 3a9z_A 237 GVDFLTIVGHKFYG-PR-IGALY 257 (432)
T ss_dssp CCSEEEEEGGGTTC-CS-CEEEE
T ss_pred CCCEEEEehhHhcC-Cc-ceEEE
Confidence 35999999999886 66 88764
No 40
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.68 E-value=4.7e-16 Score=169.88 Aligned_cols=196 Identities=18% Similarity=0.049 Sum_probs=148.9
Q ss_pred cccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHH
Q psy13453 525 FNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVS 604 (764)
Q Consensus 525 ~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~A 604 (764)
|+.+.......+.+ .+.+...+.. ..++....+..++.+++++++|.+++ ...+||+|||+++..+
T Consensus 36 ~l~~~~~~~~~~~v-~~a~~~~~~~-----~~~~~~~~~~~~~~~~la~~~g~~~~--------~~v~~t~g~t~al~~~ 101 (393)
T 1vjo_A 36 LLLGPGPSNAHPSV-LQAMNVSPVG-----HLDPAFLALMDEIQSLLRYVWQTENP--------LTIAVSGTGTAAMEAT 101 (393)
T ss_dssp EECSSSCCCCCHHH-HHHHSSCCCC-----TTSHHHHHHHHHHHHHHHHHHTCCCS--------CEEEESSCHHHHHHHH
T ss_pred eeccCCCCCCCHHH-HHHHhccccc-----ccCHHHHHHHHHHHHHHHHHhCCCCC--------cEEEEeCchHHHHHHH
Confidence 44444344444443 3444443322 23455678888999999999998642 1579999999999988
Q ss_pred HHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh--HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcC
Q psy13453 605 ILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS--VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKG 682 (764)
Q Consensus 605 l~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S--v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G 682 (764)
+.++.. ++..|++++.+|++ +..++...|.+++.+|++.++.+|+++|+++|++.
T Consensus 102 ~~~~~~-------------------~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~---- 158 (393)
T 1vjo_A 102 IANAVE-------------------PGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETH---- 158 (393)
T ss_dssp HHHHCC-------------------TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHH----
T ss_pred HHhccC-------------------CCCEEEEEcCChhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhC----
Confidence 876521 11247778888988 88889999999999999988999999999999863
Q ss_pred CCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCcee
Q psy13453 683 LIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSA 762 (764)
Q Consensus 683 ~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~ 762 (764)
.+.+|+.+..++.+|.+.|+++|+++|++||+|+++|++|+.+....+ +... .+|.++.++||+++.|.++|+
T Consensus 159 -~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~-----~~~~-~~di~~~s~sK~l~~~~~~G~ 231 (393)
T 1vjo_A 159 -RPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIF-----LDAW-GVDLAYSCSQKGLGCSPGASP 231 (393)
T ss_dssp -CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCC-----TTTT-TCSEEECCSSSTTCSCSSCEE
T ss_pred -CceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCc-----cccc-CccEEEEcCcccccCCCceEE
Confidence 144788889999999999999999999999999999999995432211 2222 469999999999999998888
Q ss_pred eC
Q psy13453 763 MW 764 (764)
Q Consensus 763 l~ 764 (764)
++
T Consensus 232 l~ 233 (393)
T 1vjo_A 232 FT 233 (393)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 41
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.68 E-value=1e-15 Score=165.75 Aligned_cols=204 Identities=16% Similarity=0.107 Sum_probs=148.3
Q ss_pred ccccccCCCCChHHHHHHHHHHhhcc---cCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHH
Q psy13453 524 QFNAYFPTGSSYPSIVGDMLSGAFGL---IGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEA 600 (764)
Q Consensus 524 ~~~~~~~~~~~~~~~lad~l~~~lN~---n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeA 600 (764)
.|+++-..+..++.++..+....-+. ....+..+........++.+++++++|.+++ ..++|+|||++
T Consensus 3 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~---------~v~~~~g~t~a 73 (384)
T 1eg5_A 3 VYFDNNATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPS---------EIFFTSCATES 73 (384)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGG---------GEEEESCHHHH
T ss_pred EEEecCccCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCC---------eEEEECCHHHH
Confidence 46666655555555544333322211 1111222344567788899999999998653 58999999999
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHH---HhCCCceEEEecCCCCcccHHHHHHHHHH
Q psy13453 601 TLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSA---IIGDVPVRQLRSDDNGVLRGDALLTAVKE 677 (764)
Q Consensus 601 Nl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa---~~lGl~v~~Vp~d~~g~md~~~Le~~I~~ 677 (764)
+..++.+++..... ++..|++++.+|.++..++ ...|.+++.||.++++.+|+++|+++|++
T Consensus 74 ~~~~~~~~~~~~~~---------------~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 138 (384)
T 1eg5_A 74 INWILKTVAETFEK---------------RKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDE 138 (384)
T ss_dssp HHHHHHHHHHHTTT---------------TCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCT
T ss_pred HHHHHHhhhhhccC---------------CCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCC
Confidence 99998877642100 1225788899999887766 66899999999998999999999999864
Q ss_pred hhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcC--CEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCC
Q psy13453 678 DLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYN--IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLL 755 (764)
Q Consensus 678 ~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~g--lwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~ 755 (764)
. +.+|+.+..++.+|.+.|+++|.++|++|| +|+|+|+||+.+.... .+..+ .+|.++.++||+++
T Consensus 139 ~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~-----~~~~~-~~di~~~s~sK~~g 206 (384)
T 1eg5_A 139 D------TFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPF-----SLEKL-EVDYASFSAHKFHG 206 (384)
T ss_dssp T------EEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCC-----CCTTT-CCSEEEEEGGGGTS
T ss_pred C------CeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCccc-----Cchhc-CCCEEEecHHHhcC
Confidence 2 557888899999999999999999999999 9999999987432211 12222 46999999999855
Q ss_pred CCcCceeeC
Q psy13453 756 VNFDCSAMW 764 (764)
Q Consensus 756 ~P~~~g~l~ 764 (764)
|.|+|+++
T Consensus 207 -~~G~G~~~ 214 (384)
T 1eg5_A 207 -PKGVGITY 214 (384)
T ss_dssp -CTTCEEEE
T ss_pred -CCceEEEE
Confidence 66678763
No 42
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.67 E-value=3.4e-16 Score=170.08 Aligned_cols=201 Identities=12% Similarity=0.011 Sum_probs=149.8
Q ss_pred CCCccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHH
Q psy13453 521 QSPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEA 600 (764)
Q Consensus 521 ~~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeA 600 (764)
..|+++.+.+++...+..+.+.+.... .. ...+....+..++.+++++++|.+.. ...+||+|||++
T Consensus 20 ~~~~~~~~~p~p~~~~~~v~~a~~~~~---~~--~~~~~~~~~~~~l~~~la~~~~~~~~--------~~v~~~~gg~~a 86 (393)
T 3kgw_A 20 SVPTRLLLGPGPSNLAPRVLAAGSLRM---IG--HMQKEMLQIMEEIKQGIQYVFQTRNP--------LTLVVSGSGHCA 86 (393)
T ss_dssp CCCCCEECSSSCCCCCHHHHHHTTCCC---CC--TTSHHHHHHHHHHHHHHHHHHTCCCS--------EEEEESCCTTTH
T ss_pred CCccceeccCCCCCCCHHHHHHhcccc---cC--cccHHHHHHHHHHHHHHHHHhCCCCC--------cEEEEeCCcHHH
Confidence 346777777666655444444333311 11 23466678888999999999998653 247899999999
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch--hHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHh
Q psy13453 601 TLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS--SVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKED 678 (764)
Q Consensus 601 Nl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~--Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~ 678 (764)
+..++.+.. . ++..|+++..+|+ .+..++...|.+++.+|.+.++.+|+++|+++|++.
T Consensus 87 l~~~~~~~~----~---------------~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~ 147 (393)
T 3kgw_A 87 METALFNLL----E---------------PGDSFLTGTNGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQH 147 (393)
T ss_dssp HHHHHHHHC----C---------------TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHhcC----C---------------CCCEEEEEeCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhC
Confidence 988877541 1 1124566677776 347778889999999999989999999999999873
Q ss_pred hhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc
Q psy13453 679 LAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 679 ~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~ 758 (764)
.+-+|+++..++.+|.+.|+++|+++|++||+|+++|++|+.+...... .. ..+|.+++++||+++.|.
T Consensus 148 -----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~-----~~-~~~d~~~~s~sK~~~~~~ 216 (393)
T 3kgw_A 148 -----KPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYM-----DQ-QGIDIMYSSSQKVLNAPP 216 (393)
T ss_dssp -----CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCT-----TT-TTCCEEEEESSSTTCCCS
T ss_pred -----CCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccch-----hh-cCCCEEEecCcccccCCC
Confidence 2458888889999999999999999999999999999999844332211 11 135999999999999899
Q ss_pred CceeeC
Q psy13453 759 DCSAMW 764 (764)
Q Consensus 759 ~~g~l~ 764 (764)
++|+++
T Consensus 217 g~g~~~ 222 (393)
T 3kgw_A 217 GISLIS 222 (393)
T ss_dssp SCEEEE
T ss_pred ceeEEE
Confidence 988764
No 43
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.67 E-value=4.2e-16 Score=168.82 Aligned_cols=171 Identities=15% Similarity=0.036 Sum_probs=136.4
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
.++....+..++.+++++++|.+.. ....+||+|||+++. ++.+. .. ++..|+
T Consensus 29 ~~~~~~~~~~~~~~~la~~~~~~~~-------~~~v~~~~g~t~al~-~~~~~----~~---------------~gd~vi 81 (384)
T 3zrp_A 29 TSKEFVEALAYSLKGLRYVMGASKN-------YQPLIIPGGGTSAME-SVTSL----LK---------------PNDKIL 81 (384)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCCTT-------SEEEEEESCHHHHHH-HGGGG----CC---------------TTCEEE
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCCC-------CcEEEEcCCcHHHHH-HHHhh----cC---------------CCCEEE
Confidence 3566788899999999999998752 125799999999998 76432 11 123567
Q ss_pred ecCCcchh--HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc
Q psy13453 636 TSDQSNSS--VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY 713 (764)
Q Consensus 636 ~S~~aH~S--v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~ 713 (764)
+++.+|++ +...+...|.+++.||++.++.+|+++|+++|++. .+.+|+.+..++.+|.+.|+++|.++|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~ 156 (384)
T 3zrp_A 82 VVSNGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKS-----EYKLVALTHVETSTGVREPVKDVINKIRKY 156 (384)
T ss_dssp EECSSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHS-----CEEEEEEESEETTTTEECCHHHHHHHHGGG
T ss_pred EecCCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhC-----CCcEEEEeCCCCCCceECcHHHHHHHHHhc
Confidence 77788876 55666778999999999999999999999999873 155888889999999999999999999999
Q ss_pred CCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 714 NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 714 glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
|+|+|+|++|+.+....+ +... .+|.++.++||+++.|.++|+++
T Consensus 157 ~~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~~K~~~~~~g~g~~~ 201 (384)
T 3zrp_A 157 VELIVVDGVSSVGAEEVK-----AEEW-NVDVYLTASQKALGSAAGLGLLL 201 (384)
T ss_dssp EEEEEEECTTTTTTSCCC-----TTTT-TCSEEEEETTSTTCCCSSEEEEE
T ss_pred CCEEEEECcccccCcccc-----cccc-CCCEEEecCcccccCCCceEEEE
Confidence 999999999986544322 1111 36999999999999899988864
No 44
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.67 E-value=5.4e-16 Score=169.22 Aligned_cols=170 Identities=15% Similarity=0.090 Sum_probs=134.6
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEe
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT 636 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~ 636 (764)
++.......++.+++++++|.+.+ ...++|+|||+++..++.+.. . ++..|++
T Consensus 47 ~~~~~~~~~~l~~~la~~~g~~~~--------~~i~~~~g~t~a~~~~~~~~~----~---------------~gd~vl~ 99 (393)
T 2huf_A 47 HPETLKIMDDIKEGVRYLFQTNNI--------ATFCLSASGHGGMEATLCNLL----E---------------DGDVILI 99 (393)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCCS--------EEEEESSCHHHHHHHHHHHHC----C---------------TTCEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCC--------cEEEEcCcHHHHHHHHHHHHh----C---------------CCCEEEE
Confidence 456678888999999999998642 157899999999998887651 1 1124777
Q ss_pred cCCcchhH--HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcC
Q psy13453 637 SDQSNSSV--EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYN 714 (764)
Q Consensus 637 S~~aH~Sv--~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~g 714 (764)
++.+|++. .+.+...|.+++.+|+++++.+|+++|+++|++. .+.+|+++..++.+|.+.|+++|+++|++||
T Consensus 100 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~ 174 (393)
T 2huf_A 100 GHTGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIH-----KPSVLFLTQGDSSTGVLQGLEGVGALCHQHN 174 (393)
T ss_dssp EESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECCCTTHHHHHHHTT
T ss_pred ECCCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhcc-----CCcEEEEEccCCCccccCCHHHHHHHHHHcC
Confidence 88888873 3445668999999999988999999999999763 1448888899999999999999999999999
Q ss_pred CEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 715 IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 715 lwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+|+|+|+|++.+....+ +... .+|.++.++|||++.|.|+|+++
T Consensus 175 ~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~sK~l~g~~G~G~~~ 218 (393)
T 2huf_A 175 CLLIVDTVASLGGAPMF-----MDRW-EIDAMYTGSQKVLGAPPGITPVS 218 (393)
T ss_dssp CEEEEECTTTBTTBCCC-----TTTT-TCSEEECCSSSTTCCCSSCEEEE
T ss_pred CEEEEEcccccCCCCcc-----hhhc-CccEEEECCCcccccCCCeEEEE
Confidence 99999999876433221 1111 36999999999998899988764
No 45
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.65 E-value=8.7e-16 Score=164.80 Aligned_cols=204 Identities=17% Similarity=0.115 Sum_probs=144.4
Q ss_pred cccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHH
Q psy13453 525 FNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVS 604 (764)
Q Consensus 525 ~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~A 604 (764)
||++-..+..++. +.+.+...+.. |..+.....+..++.+|+++++|.+. ...+||+|||+++..+
T Consensus 17 ~l~~~~~~~~~~~-v~~a~~~~~~~----~~~~~g~~~~~~~~~~~l~~~~g~~~---------~~v~~~~g~t~a~~~~ 82 (359)
T 1svv_A 17 SFVNDYSVGMHPK-ILDLMARDNMT----QHAGYGQDSHCAKAARLIGELLERPD---------ADVHFISGGTQTNLIA 82 (359)
T ss_dssp ECSCSCSSCCCHH-HHHHHHHHTTC----CCCSTTCSHHHHHHHHHHHHHHTCTT---------SEEEEESCHHHHHHHH
T ss_pred EecCCCcCCCCHH-HHHHHHHHHhh----ccccccccHHHHHHHHHHHHHhCCCC---------ccEEEeCCchHHHHHH
Confidence 4544333333333 34444444442 33344456788899999999999755 3689999999999998
Q ss_pred HHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHH--HHhCCCceEEEecCCCCcccHHHHHHHHHHhh-hc
Q psy13453 605 ILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKS--AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDL-AK 681 (764)
Q Consensus 605 l~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kA--a~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~-~~ 681 (764)
+.+++. ++..|++++.+|.+...+ +...|.+++.+|.+ ++.+|+++|+++|++.. +.
T Consensus 83 ~~~~~~-------------------~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~l~~~~~~~ 142 (359)
T 1svv_A 83 CSLALR-------------------PWEAVIATQLGHISTHETGAIEATGHKVVTAPCP-DGKLRVADIESALHENRSEH 142 (359)
T ss_dssp HHHHCC-------------------TTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT-TSCCCHHHHHHHHHHSCSTT
T ss_pred HHHHhC-------------------CCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC-CCeecHHHHHHHHHHHHhcc
Confidence 876632 123588899999999884 78889999999986 78999999999998652 23
Q ss_pred CCCceEEEEeeccCCcccccc---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCC-CcccEEEEcCCccCCCC
Q psy13453 682 GLIPCCLIATLGTTGTCAFDN---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGL-EYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 682 G~~p~~VvataGTT~~GaiDp---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gi-e~aDSit~d~HK~l~~P 757 (764)
|..+.+|+.+.. +.+|.+.| +++|+++|++||+|+|+|++|+++.+.........-++ ..+|++++++||+++ |
T Consensus 143 ~~~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~-~ 220 (359)
T 1svv_A 143 MVIPKLVYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGG-M 220 (359)
T ss_dssp SCEEEEEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTC-S
T ss_pred CCCceEEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCC-C
Confidence 444667777776 57999977 99999999999999999999955422111111000001 246999999999855 8
Q ss_pred cCceeeC
Q psy13453 758 FDCSAMW 764 (764)
Q Consensus 758 ~~~g~l~ 764 (764)
.++|+++
T Consensus 221 ~~~g~l~ 227 (359)
T 1svv_A 221 FGEALII 227 (359)
T ss_dssp SCEEEEE
T ss_pred CceEEEE
Confidence 8888764
No 46
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.65 E-value=6.2e-16 Score=167.20 Aligned_cols=169 Identities=14% Similarity=0.093 Sum_probs=136.4
Q ss_pred hHHHHHHHHHHH-HHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEec
Q psy13453 559 ACTELEVLVMNW-LGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTS 637 (764)
Q Consensus 559 ~~t~lE~~v~~~-la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S 637 (764)
.......++.++ +++++|.+ ..+||+|||+|+..++.++.. ++..|+++
T Consensus 50 ~~~~~~~~l~~~~la~~~~~~-----------~v~~~~g~t~a~~~~~~~~~~-------------------~gd~vl~~ 99 (371)
T 2e7j_A 50 IKTPPIHDFIHNQLPKFLGCD-----------VARVTNGAREAKFAVMHSLAK-------------------KDAWVVMD 99 (371)
T ss_dssp ---CCHHHHHHTHHHHHTTSS-----------EEEEESSHHHHHHHHHHHHCC-------------------TTCEEEEE
T ss_pred hHHHHHHHHHHHHHHHHcCCC-----------EEEEeCChHHHHHHHHHHHhC-------------------CCCEEEEc
Confidence 344556678889 99999875 378999999999988876521 12358889
Q ss_pred CCcchhHHHHHHhCCCceEEEe--cCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCC
Q psy13453 638 DQSNSSVEKSAIIGDVPVRQLR--SDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNI 715 (764)
Q Consensus 638 ~~aH~Sv~kAa~~lGl~v~~Vp--~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~gl 715 (764)
+.+|++...++...|++++.+| .++++.+|+++|+++|++..++ ..+.+|+.+..++.+|.+.|+++|+++|++||+
T Consensus 100 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~-~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~ 178 (371)
T 2e7j_A 100 ENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKR-GEVVLALITYPDGNYGNLPDVKKIAKVCSEYDV 178 (371)
T ss_dssp TTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTT-SCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTC
T ss_pred cCcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhccc-CCeEEEEEECCCCCCcccCCHHHHHHHHHHcCC
Confidence 9999999999999999999999 8888999999999999865322 246688899999999999999999999999999
Q ss_pred EEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 716 WLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 716 wLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
|+|+|+||+.+....+ ... . .+|.++.++||+++.|.++|+++
T Consensus 179 ~li~D~a~~~~~~~~~-~~~-~----~~di~~~s~sK~~~~~~~~G~~~ 221 (371)
T 2e7j_A 179 PLLVNGAYAIGRMPVS-LKE-I----GADFIVGSGHKSMAASGPIGVMG 221 (371)
T ss_dssp CEEEECTTTBTTBCCC-HHH-H----TCSEEEEEHHHHSSCCSSCEEEE
T ss_pred eEEEECccccCCCCCC-hhh-c----CCCEEEecCCcCCCCCCCcEEEE
Confidence 9999999998654321 111 1 25899999999999999989874
No 47
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.65 E-value=8.3e-16 Score=164.74 Aligned_cols=166 Identities=14% Similarity=0.002 Sum_probs=132.5
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
.++.......++.+++++++|.+++ ..++|+|||+++..++.+... ++..|+
T Consensus 28 ~~~~~~~~~~~l~~~la~~~g~~~~---------~i~~~~g~t~a~~~~~~~~~~-------------------~gd~vl 79 (352)
T 1iug_A 28 RTEAAREVFLKARGLLREAFRTEGE---------VLILTGSGTLAMEALVKNLFA-------------------PGERVL 79 (352)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCSSE---------EEEEESCHHHHHHHHHHHHCC-------------------TTCEEE
T ss_pred cCHHHHHHHHHHHHHHHHHhCCCCc---------eEEEcCchHHHHHHHHHhccC-------------------CCCeEE
Confidence 3566677888899999999998642 589999999999988876521 112577
Q ss_pred ecCCcchhHH--HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc
Q psy13453 636 TSDQSNSSVE--KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY 713 (764)
Q Consensus 636 ~S~~aH~Sv~--kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~ 713 (764)
+++.+|++.. +.+...|.+++.||++.++.+|+++|++ ..+.+|+.+..++.+|.+.|+++|+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~---------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~ 150 (352)
T 1iug_A 80 VPVYGKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVAK---------EGYAGLLLVHSETSTGALADLPALARAFKEK 150 (352)
T ss_dssp EEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCC---------SSCSEEEEESEETTTTEECCHHHHHHHHHHH
T ss_pred EEeCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhc---------cCCcEEEEEEecCCcceecCHHHHHHHHHhh
Confidence 8888998865 4455689999999999889999998876 1355888899999999999999999999999
Q ss_pred --CCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 714 --NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 714 --glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
|+|+|+|+||+.+....+ +... .+|.++.++|||++.|.++|+++
T Consensus 151 ~~~~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~~K~~~~~~g~G~~~ 197 (352)
T 1iug_A 151 NPEGLVGADMVTSLLVGEVA-----LEAM-GVDAAASGSQKGLMCPPGLGFVA 197 (352)
T ss_dssp CTTCEEEEECTTTBTTBCCC-----SGGG-TCSEEEEESSSTTCCCSCEEEEE
T ss_pred CCCCEEEEECCccccCccee-----cccc-CeeEEEecCcccccCCCceeEEE
Confidence 999999999985443222 1111 36999999999999999998864
No 48
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.65 E-value=9.2e-16 Score=164.81 Aligned_cols=195 Identities=14% Similarity=0.006 Sum_probs=143.3
Q ss_pred cccccCCCCChH-HHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHH
Q psy13453 525 FNAYFPTGSSYP-SIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLV 603 (764)
Q Consensus 525 ~~~~~~~~~~~~-~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~ 603 (764)
++.+.+++...+ .++..+.....+........++....+.+++.+++++++|.++. ...++|+|||+++..
T Consensus 5 ~~~~~p~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~--------~~v~~~~g~t~al~~ 76 (362)
T 3ffr_A 5 KIYFTPGPSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSN--------YEVLFLASATEIWER 76 (362)
T ss_dssp CEEECSSSCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTT--------EEEEEESCHHHHHHH
T ss_pred ceeccCCCcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCC--------cEEEEeCCchHHHHH
Confidence 455555555443 34433333333333223346788889999999999999998642 367899999999988
Q ss_pred HHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh--HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhc
Q psy13453 604 SILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS--VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAK 681 (764)
Q Consensus 604 Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S--v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~ 681 (764)
++.+... + .+++....||+ +...+...|++++.|+.+.++.+|+++|+ +.
T Consensus 77 ~~~~l~~-------------------~--~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~--~~----- 128 (362)
T 3ffr_A 77 IIQNCVE-------------------K--KSFHCVNGSFSKRFYEFAGELGREAYKEEAAFGKGFYPADIT--VP----- 128 (362)
T ss_dssp HHHHHCS-------------------S--EEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC--CC-----
T ss_pred HHHhccC-------------------C--cEEEEcCcHHHHHHHHHHHHhCCCeEEEecCCCCCCCHHHHh--cc-----
Confidence 8764310 1 24445556666 34466778999999999988999999998 22
Q ss_pred CCCceEEEEeeccCCccccccHHHHHHHHHhc-CCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCc
Q psy13453 682 GLIPCCLIATLGTTGTCAFDNLEELGPICQEY-NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDC 760 (764)
Q Consensus 682 G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~-glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~ 760 (764)
..+-+|+.+..+|.+|.+.|+++|+++|++| |+|+|+|+||+.+....+ +..+|.++.++|||++.|.|+
T Consensus 129 -~~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~--------~~~~d~~~~s~~K~~~~~~G~ 199 (362)
T 3ffr_A 129 -ADAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFD--------WTKIDSVFFSVQKCFGLPAGL 199 (362)
T ss_dssp -TTCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCC--------TTSCSEEEEETTSTTCCCSCC
T ss_pred -CCccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccC--------hhHCcEEEEecccccCCCCce
Confidence 2356888889999999999999999999999 999999999886543221 222699999999999989998
Q ss_pred eeeC
Q psy13453 761 SAMW 764 (764)
Q Consensus 761 g~l~ 764 (764)
|+++
T Consensus 200 g~~~ 203 (362)
T 3ffr_A 200 GVWI 203 (362)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8763
No 49
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.65 E-value=1.5e-15 Score=165.89 Aligned_cols=200 Identities=14% Similarity=0.070 Sum_probs=147.2
Q ss_pred CCccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHH
Q psy13453 522 SPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEAT 601 (764)
Q Consensus 522 ~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeAN 601 (764)
.|+.+.+.+++...+..+.+.+...+.. .| ++.......++.+++++++|.+++ ...++|+|||+++
T Consensus 16 ~~~~~~~~~~p~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~l~~~la~~~~~~~~--------~~v~~~~g~t~al 82 (396)
T 2ch1_A 16 IPEKIMMGPGPSNCSKRVLTAMTNTVLS---NF--HAELFRTMDEVKDGLRYIFQTENR--------ATMCVSGSAHAGM 82 (396)
T ss_dssp CCCCBCCSSSSCCCCHHHHHHTTSCCCC---TT--CHHHHHHHHHHHHHHHHHHTCCCS--------CEEEESSCHHHHH
T ss_pred CCcceeecCCCCCCCHHHHHHhcccccc---CC--ChhHHHHHHHHHHHHHHHhCCCCC--------cEEEECCcHHHHH
Confidence 3455555555444444444444433321 12 566667788899999999998652 1478999999999
Q ss_pred HHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH--HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhh
Q psy13453 602 LVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE--KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDL 679 (764)
Q Consensus 602 l~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~--kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~ 679 (764)
..++.+.. . ++..|++++.+|.+.. +++...|.+++.||++.++.+|+++|+++|++.
T Consensus 83 ~~~~~~~~----~---------------~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~- 142 (396)
T 2ch1_A 83 EAMLSNLL----E---------------EGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELH- 142 (396)
T ss_dssp HHHHHHHC----C---------------TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHH-
T ss_pred HHHHHHhc----C---------------CCCeEEEEcCCcccHHHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhC-
Confidence 88877651 1 1124677788888864 577889999999999988999999999999863
Q ss_pred hcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC
Q psy13453 680 AKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 680 ~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~ 759 (764)
.+-+|+.+..++.+|.+.|+++|+++|++||+|+++|+||+.+....+ +... .+|.++.++||+++.|.+
T Consensus 143 ----~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~-----~~~~-~~d~~~~s~~K~~~~~~g 212 (396)
T 2ch1_A 143 ----QPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFY-----MDKW-EIDAVYTGAQKVLGAPPG 212 (396)
T ss_dssp ----CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCCEEECCCC-CCCCCSS
T ss_pred ----CCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccc-----hhhc-CcCEEEEcCCccccCCCC
Confidence 144788889999999999999999999999999999999985432211 1222 369999999999999999
Q ss_pred ceeeC
Q psy13453 760 CSAMW 764 (764)
Q Consensus 760 ~g~l~ 764 (764)
+|+++
T Consensus 213 ~g~~~ 217 (396)
T 2ch1_A 213 ITPIS 217 (396)
T ss_dssp CEEEE
T ss_pred eEEEE
Confidence 98763
No 50
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.64 E-value=1.7e-15 Score=169.51 Aligned_cols=228 Identities=11% Similarity=0.047 Sum_probs=154.4
Q ss_pred ChhhHhhcCCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCccccccCCCC---ChHHHHHHHH--HHhhcc-cCccccC
Q psy13453 483 EPGYLASLVPGEMPEEGEDWRHIMRDMNTVIMPGITHWQSPQFNAYFPTGS---SYPSIVGDML--SGAFGL-IGFSWLS 556 (764)
Q Consensus 483 ~p~~l~~~l~~~lP~~g~~~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~---~~~~~lad~l--~~~lN~-n~~~~~~ 556 (764)
-|..++.. +..+| +|.+..++++++......+.. +|..|...+. ..+..+.+++ ...+.. +....+.
T Consensus 30 ~p~~~~~~-~~~lp-~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~g~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~ 102 (438)
T 1wyu_A 30 LPKEILSP-PIDLP-EPLPEWKVLEELRRLAAQNLP-----AHKAFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQPEV 102 (438)
T ss_dssp SCGGGSSC-CCCCC-CCCCHHHHHHHHHHHHHTSCC-----CTTCCCCSSCCCCCCCHHHHHHHTSHHHHHCCSCCSGGG
T ss_pred CcHHHhcC-CCCCC-CCCCHHHHHHHHHHHHhcCcC-----ccccccCCCccCCcCcHHHHHHHhcchhhhcCCCCcchh
Confidence 36667666 77899 899999999999886544321 3444443333 1233333333 222222 1111245
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEe
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT 636 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~ 636 (764)
++...+++.++.+++++++|.+.. .+++|+|+|.++..++.+.+. . ++..|++
T Consensus 103 ~~g~~~~~~~~~~~la~~~g~~~~---------~i~~~~g~taa~ea~~~a~~~---~---------------~gd~Viv 155 (438)
T 1wyu_A 103 SQGVLQATFEYQTMIAELAGLEIA---------NASMYDGATALAEGVLLALRE---T---------------GRMGVLV 155 (438)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSSEE---------CSCBSSHHHHHHHHHHHHHHH---H---------------TCCEEEE
T ss_pred hhhHHHHHHHHHHHHHHHhCCCcc---------ceEEeCcHHHHHHHHHHHHhc---C---------------CCCEEEE
Confidence 788899999999999999999752 467999999443222222221 1 1225788
Q ss_pred cCCcchhHHHHH----HhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh
Q psy13453 637 SDQSNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE 712 (764)
Q Consensus 637 S~~aH~Sv~kAa----~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~ 712 (764)
++.+|.+...++ +..|++++.||+ ++|.+|+++ |.+ .+.+|+++.. +.+|.++|+++|+++|++
T Consensus 156 ~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~~~~~d~~~----i~~------~t~~v~i~~p-n~tG~~~~l~~i~~la~~ 223 (438)
T 1wyu_A 156 SQGVHPEYRAVLRAYLEAVGAKLLTLPL-EGGRTPLPE----VGE------EVGAVVVQNP-NFLGALEDLGPFAEAAHG 223 (438)
T ss_dssp ETTSCHHHHHHHHHHHHHTTCEEEEECC-BTTBCCCCC----CCT------TEEEEEEESS-CTTSBCCCHHHHHHHHHH
T ss_pred cCccCHhHHHHHHHHHHHCCCEEEEEcC-cCCccCHHH----hCC------CeEEEEEECC-CCCeEEecHHHHHHHHHH
Confidence 999999987654 458999999998 578899876 322 3668888887 999999999999999999
Q ss_pred cCCEEEEecc-ccccccccchhhhhhcCCCcccEEEEcCCc-----cCCCCcCceeeC
Q psy13453 713 YNIWLHVDAA-YAGSALLLPEYAHLKRGLEYVDSFDFNTHK-----WLLVNFDCSAMW 764 (764)
Q Consensus 713 ~glwLHVDaA-~Gg~~l~~~~~r~~l~gie~aDSit~d~HK-----~l~~P~~~g~l~ 764 (764)
||+|+|||+. ++.+.+..+ .. ..+|.+++|.|| |++.| ++|+++
T Consensus 224 ~g~~vivd~d~~a~g~~~~~---~~----~g~D~~~~s~kk~~~~~~~~Gp-~~G~l~ 273 (438)
T 1wyu_A 224 AGALFVAVADPLSLGVLKPP---GA----YGADIAVGDGQSLGLPMGFGGP-HFGFLA 273 (438)
T ss_dssp TTCEEEEECCTTGGGTBCCH---HH----HTCSEEEEECTTTTCCCGGGCS-CCEEEE
T ss_pred cCCEEEEEechhhccCcCCC---cc----CCCCEEEECCcccCCCccCCCC-CeeEEE
Confidence 9999997754 322222222 11 136999999888 67778 888764
No 51
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.64 E-value=3.4e-15 Score=163.87 Aligned_cols=203 Identities=12% Similarity=0.033 Sum_probs=146.7
Q ss_pred ccccccCCCCChHHHHHHHHHHhhcc---c--CccccCCchHHHHHHHHHHHHHHHcCC-CccccCCCCCCCcEEEeCCh
Q psy13453 524 QFNAYFPTGSSYPSIVGDMLSGAFGL---I--GFSWLSSPACTELEVLVMNWLGKALGL-PEEFLNCSPGPGGGIIQSTA 597 (764)
Q Consensus 524 ~~~~~~~~~~~~~~~lad~l~~~lN~---n--~~~~~~sp~~t~lE~~v~~~la~llG~-p~~~~~~~~~~~~GvfTsGg 597 (764)
.||++-..+..++.+. +.+...+.. + ...+..++.......++.+++++++|. ++ ...+||+||
T Consensus 30 i~l~~~~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~---------~~v~~~~g~ 99 (420)
T 1t3i_A 30 VYLDNAATSQKPRAVL-EKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSP---------REIVYTRNA 99 (420)
T ss_dssp EECBTTTCCCCCHHHH-HHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCG---------GGEEEESSH
T ss_pred EEecCCccCCCCHHHH-HHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCC---------CeEEEcCCh
Confidence 3565554444444443 334443322 1 112222333456677899999999998 33 368999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh----HHHHHHhCCCceEEEecCCCCcccHHHHHH
Q psy13453 598 SEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS----VEKSAIIGDVPVRQLRSDDNGVLRGDALLT 673 (764)
Q Consensus 598 TeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S----v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~ 673 (764)
|+|+..++.+++..... ++..|++++.+|.+ +...+...|++++.||+++++.+|+++|++
T Consensus 100 t~a~~~~~~~~~~~~~~---------------~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~ 164 (420)
T 1t3i_A 100 TEAINLVAYSWGMNNLK---------------AGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKT 164 (420)
T ss_dssp HHHHHHHHHHTHHHHCC---------------TTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHH
T ss_pred HHHHHHHHHHhhhcccC---------------CCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHH
Confidence 99999998877532111 12257788888988 566777889999999999899999999999
Q ss_pred HHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCcc
Q psy13453 674 AVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKW 753 (764)
Q Consensus 674 ~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~ 753 (764)
+|++. +.+|+.+..++.+|.+.|+++|+++|++||+|+|+|+||+.+....+ .... + +|.++.++||
T Consensus 165 ~l~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-~~~~--~---~di~~~s~sK- 231 (420)
T 1t3i_A 165 LLSEK------TKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLD-VQLI--D---CDWLVASGHK- 231 (420)
T ss_dssp HCCTT------EEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC-HHHH--T---CSEEEEEGGG-
T ss_pred hhCCC------ceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCc-hhhc--C---CCEEEEehhh-
Confidence 98643 55888899999999999999999999999999999999987654321 1211 2 5999999999
Q ss_pred CCCCcCceeeC
Q psy13453 754 LLVNFDCSAMW 764 (764)
Q Consensus 754 l~~P~~~g~l~ 764 (764)
++.|.|+|+++
T Consensus 232 ~~~~~g~G~~~ 242 (420)
T 1t3i_A 232 MCAPTGIGFLY 242 (420)
T ss_dssp TTSCTTCEEEE
T ss_pred hcCCCceEEEE
Confidence 45677888763
No 52
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.64 E-value=3.3e-16 Score=168.08 Aligned_cols=171 Identities=16% Similarity=0.137 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
..+..++.+|+++++| ++ ...+||+|||++|..++.+++. ++..|+++..+
T Consensus 42 ~~~~~~l~~~la~~~g-~~---------~~v~~~~~gt~a~~~al~~~~~-------------------~gd~vi~~~~~ 92 (356)
T 1v72_A 42 DELTAQVKRKFCEIFE-RD---------VEVFLVPTGTAANALCLSAMTP-------------------PWGNIYCHPAS 92 (356)
T ss_dssp SHHHHHHHHHHHHHHT-SC---------CEEEEESCHHHHHHHHHHTSCC-------------------TTEEEEECTTS
T ss_pred chHHHHHHHHHHHHhC-CC---------CcEEEeCCccHHHHHHHHHhcC-------------------CCCEEEEcCcc
Confidence 4567888899999998 43 2479999999999888875421 12357788899
Q ss_pred chhHHHH--HHhC--CCceEEEecCCCCcccHHHHHH-HHHHhh-hcCCCceEEEEeeccCCccc---cccHHHHHHHHH
Q psy13453 641 NSSVEKS--AIIG--DVPVRQLRSDDNGVLRGDALLT-AVKEDL-AKGLIPCCLIATLGTTGTCA---FDNLEELGPICQ 711 (764)
Q Consensus 641 H~Sv~kA--a~~l--Gl~v~~Vp~d~~g~md~~~Le~-~I~~~~-~~G~~p~~VvataGTT~~Ga---iDpl~eIa~i~~ 711 (764)
|++..++ +..+ |.+++.||.+ ++.+|+++|++ +|++.. ..+..+.+|+++..+ ++|. .+++++|+++|+
T Consensus 93 ~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~-~tG~~~~~~~l~~i~~~~~ 170 (356)
T 1v72_A 93 HINNDECGAPEFFSNGAKLMTVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQAT-EVGSIYTLDEIEAIGDVCK 170 (356)
T ss_dssp HHHHSSTTHHHHHTTSCEEEECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSC-TTSCCCCHHHHHHHHHHHH
T ss_pred chhhhhchHHHHHhCCcEEEEecCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCC-CCCccCCHHHHHHHHHHHH
Confidence 9998877 7776 9999999986 58899999999 886521 223346677777754 5999 789999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCC-CcccEEEEcCCccCCCCcCceee
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGL-EYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gi-e~aDSit~d~HK~l~~P~~~g~l 763 (764)
+||+|+|+|++|+.+............++ ..+|.+++++||+ +.|.|+|++
T Consensus 171 ~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~ 222 (356)
T 1v72_A 171 SSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIV 222 (356)
T ss_dssp HTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEE
T ss_pred HcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEEE
Confidence 99999999999986432211111111122 2579999999999 669888776
No 53
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.63 E-value=1.4e-15 Score=166.77 Aligned_cols=201 Identities=10% Similarity=-0.001 Sum_probs=144.5
Q ss_pred CccccccCCCCChHHHHHHHHHHhhcc----cCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChH
Q psy13453 523 PQFNAYFPTGSSYPSIVGDMLSGAFGL----IGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTAS 598 (764)
Q Consensus 523 P~~~~~~~~~~~~~~~lad~l~~~lN~----n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgT 598 (764)
..|+++-..++.++.+.. .+...+.. ....|..++.......++.+++++++|.+++ ..+||+|+|
T Consensus 27 ~~~ld~~~~~~~~~~v~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~---------~v~~~~g~t 96 (406)
T 3cai_A 27 WVHFDAPAGMLIPDSVAT-TVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPG---------GVVLGADRA 96 (406)
T ss_dssp CEECBGGGCCCCCHHHHH-HHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGG---------GEEEESCHH
T ss_pred eEEEeCCCcCCCCHHHHH-HHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC---------eEEEeCChH
Confidence 357777655555555433 33333321 1223333444567788899999999998653 689999999
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHh----CCCceEEEecC-CCCcccHHHHHH
Q psy13453 599 EATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAII----GDVPVRQLRSD-DNGVLRGDALLT 673 (764)
Q Consensus 599 eANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~----lGl~v~~Vp~d-~~g~md~~~Le~ 673 (764)
+++..++.+.... . .++..|+++..+|.+...++.. .|.+++.||++ ++|.+|+++|++
T Consensus 97 ~al~~~~~~l~~~-~---------------~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~ 160 (406)
T 3cai_A 97 VLLSLLAEASSSR-A---------------GLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWES 160 (406)
T ss_dssp HHHHHHHHHTGGG-G---------------BTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHH
T ss_pred HHHHHHHHHHhhc-c---------------CCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHH
Confidence 9877665532110 1 1123578888999887666544 68999999998 789999999999
Q ss_pred HHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCcc
Q psy13453 674 AVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKW 753 (764)
Q Consensus 674 ~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~ 753 (764)
+|+++ +.+|+.+..++.+|.+.|+++|+++|++||+|+|+|+||+.+....+ ... . + +|.++.++|||
T Consensus 161 ~l~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~-~-~---~d~~~~s~~K~ 228 (406)
T 3cai_A 161 LISKS------TRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLD-IRE-T-D---ADVVTVNAHAW 228 (406)
T ss_dssp HCCTT------EEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCC-HHH-H-C---CSEEEEEGGGG
T ss_pred HhCCC------ceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCC-chh-c-C---CCEEEeehhhh
Confidence 98543 55888899999999999999999999999999999999986544332 111 1 3 59999999998
Q ss_pred CCCCcCce-ee
Q psy13453 754 LLVNFDCS-AM 763 (764)
Q Consensus 754 l~~P~~~g-~l 763 (764)
++ |. +| ++
T Consensus 229 ~g-~~-~G~~~ 237 (406)
T 3cai_A 229 GG-PP-IGAMV 237 (406)
T ss_dssp TS-CS-CEEEE
T ss_pred cC-CC-cCeEE
Confidence 76 65 77 65
No 54
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.63 E-value=1.9e-15 Score=162.25 Aligned_cols=168 Identities=13% Similarity=0.048 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+++++++|.+.+ ....+||+|||+++..++.+++. + ++-+++++...|
T Consensus 37 ~~~~~l~~~la~~~g~~~~-------~~~v~~~~g~t~a~~~~~~~~~~---~---------------gd~vi~~~~~~~ 91 (366)
T 1m32_A 37 GVVEQIRQQLTALATASEG-------YTSVLLQGSGSYAVEAVLGSALG---P---------------QDKVLIVSNGAY 91 (366)
T ss_dssp TTHHHHHHHHHHHHCSSSS-------EEEEEEESCHHHHHHHHHHHSCC---T---------------TCCEEEEESSHH
T ss_pred HHHHHHHHHHHHHhCCCCc-------CcEEEEecChHHHHHHHHHHhcC---C---------------CCeEEEEeCCCc
Confidence 5566788899999984321 12589999999999988876531 0 123566777888
Q ss_pred hh-HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEe
Q psy13453 642 SS-VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVD 720 (764)
Q Consensus 642 ~S-v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVD 720 (764)
.+ +..++...|++++.+|++.++.+|+++|+++|++.. .+.+|+.+..++.+|.+.|+++|+++|++||+|+|+|
T Consensus 92 ~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D 167 (366)
T 1m32_A 92 GARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADP----TISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVD 167 (366)
T ss_dssp HHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCT----TCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEE
T ss_pred cHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCC----CeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEE
Confidence 76 567778889999999999889999999999998631 2457778888899999999999999999999999999
Q ss_pred ccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 721 AAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 721 aA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+||+.+....+ +... .+|.++.++|||++.|.++|+++
T Consensus 168 ea~~~~~~~~~-----~~~~-~~di~~~s~~K~~~~~~g~G~~~ 205 (366)
T 1m32_A 168 AMSSFGGIPMD-----IAAL-HIDYLISSANKCIQGVPGFAFVI 205 (366)
T ss_dssp CTTTTTTSCCC-----TTTT-TCSEEEEESSSTTCCCSSEEEEE
T ss_pred CCccccCcCcc-----cccc-CccEEEecCcccccCCCceEEEE
Confidence 99986543221 1111 36999999999998899988764
No 55
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.62 E-value=3.2e-15 Score=168.18 Aligned_cols=207 Identities=10% Similarity=-0.004 Sum_probs=149.5
Q ss_pred ccccccCCCCChHH---HHHHHHHHhhcccCccccC-CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHH
Q psy13453 524 QFNAYFPTGSSYPS---IVGDMLSGAFGLIGFSWLS-SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASE 599 (764)
Q Consensus 524 ~~~~~~~~~~~~~~---~lad~l~~~lN~n~~~~~~-sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTe 599 (764)
.||+....+..+.. .+.+.+....+.+...|.. .+....+.+++.+|+++++|.+++ ..+||+|+|+
T Consensus 69 iyld~~~~g~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~---------~v~~t~g~t~ 139 (465)
T 3e9k_A 69 IYFLGNSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEK---------EIALMNALTV 139 (465)
T ss_dssp EECBTTTSCCEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGG---------GEEECSCHHH
T ss_pred EEecCCccCCChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcC---------CEEEECCHHH
Confidence 47776665554433 3555554444443333332 233445667789999999999763 6889999999
Q ss_pred HHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh----HHHHHHhCCCc-----eEEEecCCCCcccHHH
Q psy13453 600 ATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS----VEKSAIIGDVP-----VRQLRSDDNGVLRGDA 670 (764)
Q Consensus 600 ANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S----v~kAa~~lGl~-----v~~Vp~d~~g~md~~~ 670 (764)
++..++.+... +. .++..|+++..+|.+ +...++..|+. +..+|.++++.+|+++
T Consensus 140 al~~~~~~~~~---~~-------------~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~ 203 (465)
T 3e9k_A 140 NLHLLMLSFFK---PT-------------PKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIED 203 (465)
T ss_dssp HHHHHHHHHCC---CC-------------SSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHH
T ss_pred HHHHHHHHhcc---cc-------------CCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHH
Confidence 88777665421 10 123468889999987 44467778886 3455777889999999
Q ss_pred HHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcC
Q psy13453 671 LLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNT 750 (764)
Q Consensus 671 Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~ 750 (764)
|+++|++.. ..+.+|+.+..++.+|.+.|+++|+++|++||+|+|+|+||+.+....+-... .+|.+++++
T Consensus 204 l~~~i~~~~---~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~------~~D~~~~s~ 274 (465)
T 3e9k_A 204 ILEVIEKEG---DSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDW------GVDFACWCS 274 (465)
T ss_dssp HHHHHHHHG---GGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH------TCCEEEECS
T ss_pred HHHHHHhcC---CCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhc------CCCEEEECc
Confidence 999998542 13568899999999999999999999999999999999999987665432111 359999999
Q ss_pred CccCC-CCcCceeeC
Q psy13453 751 HKWLL-VNFDCSAMW 764 (764)
Q Consensus 751 HK~l~-~P~~~g~l~ 764 (764)
||+++ .|.++|++|
T Consensus 275 ~K~l~~gp~~~g~l~ 289 (465)
T 3e9k_A 275 YKYLNAGAGGIAGAF 289 (465)
T ss_dssp SSTTCCCTTCCCEEE
T ss_pred ccccccCCCceEEEE
Confidence 99994 788888764
No 56
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.61 E-value=6.3e-15 Score=160.78 Aligned_cols=203 Identities=13% Similarity=0.007 Sum_probs=145.8
Q ss_pred ccccccCCCCChHHHHHHHHHHhhcc-----cCccccCCchHHHHHHHHHHHHHHHcCC-CccccCCCCCCCcEEEeCCh
Q psy13453 524 QFNAYFPTGSSYPSIVGDMLSGAFGL-----IGFSWLSSPACTELEVLVMNWLGKALGL-PEEFLNCSPGPGGGIIQSTA 597 (764)
Q Consensus 524 ~~~~~~~~~~~~~~~lad~l~~~lN~-----n~~~~~~sp~~t~lE~~v~~~la~llG~-p~~~~~~~~~~~~GvfTsGg 597 (764)
.|+++-..++.++.++ +.+...+.. +...+..+........++.+++++++|. ++ ...+||+||
T Consensus 25 i~l~~~~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~---------~~v~~~~g~ 94 (406)
T 1kmj_A 25 AYLDSAASAQKPSQVI-DAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSA---------EELVFVRGT 94 (406)
T ss_dssp EECCTTTCCCCCHHHH-HHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCG---------GGEEEESSH
T ss_pred EEecCCccCCCCHHHH-HHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCC---------CeEEEeCCh
Confidence 4666665555444443 333333322 1111122223566778899999999998 33 368999999
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH----HHHHhCCCceEEEecCCCCcccHHHHHH
Q psy13453 598 SEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE----KSAIIGDVPVRQLRSDDNGVLRGDALLT 673 (764)
Q Consensus 598 TeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~----kAa~~lGl~v~~Vp~d~~g~md~~~Le~ 673 (764)
|+++..++.+++..... ++..|++++.+|++.. ..+...|.+++.+|.++++.+|+++|++
T Consensus 95 t~a~~~~~~~~~~~~~~---------------~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~ 159 (406)
T 1kmj_A 95 TEGINLVANSWGNSNVR---------------AGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPT 159 (406)
T ss_dssp HHHHHHHHHHTHHHHCC---------------TTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHH
T ss_pred hHHHHHHHHHhhhhcCC---------------CCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHH
Confidence 99999998877532111 1225777888887653 3466789999999999889999999999
Q ss_pred HHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCcc
Q psy13453 674 AVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKW 753 (764)
Q Consensus 674 ~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~ 753 (764)
+|++. +.+|+.+..++.+|.+.|+++|+++|++||+|+++|++|+.+....+ ... + .+|.++.++||+
T Consensus 160 ~l~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~-~~~----~-~~d~~~~s~~K~ 227 (406)
T 1kmj_A 160 LFDEK------TRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVD-VQA----L-DCDFYVFSGHKL 227 (406)
T ss_dssp HCCTT------EEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC-HHH----H-TCSEEEEEGGGT
T ss_pred HhccC------CeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCc-ccc----c-CCCEEEEEchhc
Confidence 98643 55888899999999999999999999999999999999987654322 111 1 359999999997
Q ss_pred CCCCcCceeeC
Q psy13453 754 LLVNFDCSAMW 764 (764)
Q Consensus 754 l~~P~~~g~l~ 764 (764)
+ .|.|+|+++
T Consensus 228 ~-g~~G~G~~~ 237 (406)
T 1kmj_A 228 Y-GPTGIGILY 237 (406)
T ss_dssp T-SCTTCEEEE
T ss_pred c-CCCCcEEEE
Confidence 7 577788763
No 57
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.61 E-value=5.3e-15 Score=160.37 Aligned_cols=169 Identities=13% Similarity=0.128 Sum_probs=128.5
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEE-eCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGII-QSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~Gvf-TsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
++....+..++.+++++++|.+.+ ...+| |+|||+++..++.+... + ++ .|+
T Consensus 47 ~~~~~~~~~~~~~~la~~~g~~~~--------~~~i~~~~ggt~al~~~~~~~~~---~---------------gd-~vi 99 (376)
T 3f0h_A 47 TTEFSSTMLENEKFMLEYAKAPEG--------SKAVFMTCSSTGSMEAVVMNCFT---K---------------KD-KVL 99 (376)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCTT--------CEEEEESSCHHHHHHHHHHHHCC---T---------------TC-CEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCC--------ceEEEEcCChhHHHHHHHHhccC---C---------------CC-eEE
Confidence 566778888999999999999753 23444 89999999888765421 0 01 244
Q ss_pred ecCCcchh--HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc
Q psy13453 636 TSDQSNSS--VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY 713 (764)
Q Consensus 636 ~S~~aH~S--v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~ 713 (764)
++...+++ +.+.+...|..++.+|++.++.+|+++|++++++ .+.+|+.+..++.+|.+.|+++|+++|++|
T Consensus 100 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~ 173 (376)
T 3f0h_A 100 VIDGGSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDNQ------NFTGLLVNVDETSTAVLYDTMMIGEFCKKN 173 (376)
T ss_dssp EEESSHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTTS------CCCEEEEESEETTTTEECCHHHHHHHHHHT
T ss_pred EEeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhcc------CceEEEEecccCCcceecCHHHHHHHHHHc
Confidence 44443433 2345677899999999998899999999987643 255788888899999999999999999999
Q ss_pred CCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 714 NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 714 glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
|+|+|+|++++.+....+- .. .| +|.++.++||+++.|.|+|+++
T Consensus 174 ~~~li~D~~~~~~~~~~~~-~~--~~---~d~~~~s~~K~l~~~~G~g~~~ 218 (376)
T 3f0h_A 174 NMFFVCDCVSAFLADPFNM-NE--CG---ADVMITGSQKVLACPPGISVIV 218 (376)
T ss_dssp TCEEEEECTTTTTTSCCCH-HH--HT---CSEEEEETTTTTCCCSSCEEEE
T ss_pred CCEEEEEcCccccCccccc-cc--cC---ccEEEecCcccccCCCceEEEE
Confidence 9999999999876543221 11 13 4999999999999888988763
No 58
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.58 E-value=1.7e-14 Score=172.63 Aligned_cols=168 Identities=20% Similarity=0.185 Sum_probs=130.7
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
.+..+.+++++|.+. ..++++|+|++|..++.+... +...|+++..+|.|+
T Consensus 208 ~~~ee~la~l~G~d~----------~i~~~~Gtt~a~~~~i~al~~-------------------~GD~Vlv~~~~h~s~ 258 (755)
T 2vyc_A 208 GESEKYAARVFGADR----------SWSVVVGTSGSNRTIMQACMT-------------------DNDVVVVDRNCHKSI 258 (755)
T ss_dssp HHHHHHHHHHHTCSE----------EEEESSHHHHHHHHHHHHHCC-------------------TTCEEEEESSCCHHH
T ss_pred HHHHHHHHHHhCCCc----------eEEECCcHHHHHHHHHHHhcC-------------------CCCEEEECCCchHHH
Confidence 456678999999864 245677778888888765421 123588999999999
Q ss_pred HHHHHhCCCceEEEecCCC-----Ccc-----cHHHHHHHHHHh----hhcCCCceEEEEeeccCCccccccHHHHHHHH
Q psy13453 645 EKSAIIGDVPVRQLRSDDN-----GVL-----RGDALLTAVKED----LAKGLIPCCLIATLGTTGTCAFDNLEELGPIC 710 (764)
Q Consensus 645 ~kAa~~lGl~v~~Vp~d~~-----g~m-----d~~~Le~~I~~~----~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~ 710 (764)
..++...|..++.++++.+ |.| |+++|+++|++. .++|..|.+|+++.+ |.+|.+.|+++|+++|
T Consensus 259 ~~~~~~~G~~~v~v~~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia 337 (755)
T 2vyc_A 259 EQGLMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLL 337 (755)
T ss_dssp HHHHHHHCCEEEEECCCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHH
T ss_pred HHHHHHcCCEEEEEeCCCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHH
Confidence 9999999999999988643 346 999999999863 235667778888886 5799999999999999
Q ss_pred HhcCCEEEEeccccccccccchhhhh--hcCCCcccE------EEEcCCccCCCCcCceee
Q psy13453 711 QEYNIWLHVDAAYAGSALLLPEYAHL--KRGLEYVDS------FDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 711 ~~~glwLHVDaA~Gg~~l~~~~~r~~--l~gie~aDS------it~d~HK~l~~P~~~g~l 763 (764)
++||+|+|||+||++.+.+.+.++.. +.| +.+|. ++.++||+++.|.++|++
T Consensus 338 ~~~~~~livDeA~~~~~~~~~~~~~~~~~~g-~~aD~~~~~~iv~~S~hK~L~g~~~g~~i 397 (755)
T 2vyc_A 338 EKTSDRLHFDEAWYGYARFNPIYADHYAMRG-EPGDHNGPTVFATHSTHKLLNALSQASYI 397 (755)
T ss_dssp TTTCSEEEEECTTCTTGGGCGGGTTSSSSCS-CCCCCSSBEEEEEEETTTSSSCCTTCEEE
T ss_pred HHcCCEEEEECcCchhcccCcccCCcchhcC-CcCCccCCCeEEEECccccccCcCCeeee
Confidence 99999999999999876666544211 122 12687 999999999999888876
No 59
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.58 E-value=9.9e-16 Score=172.46 Aligned_cols=162 Identities=15% Similarity=0.003 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+....++.+++++ +|.+. ..+||+|+|+||..++.++.. ++..|+++..+
T Consensus 56 ~~~~~~~~~~la~-~g~~~----------~v~~~~G~t~a~~~~~~a~~~-------------------~gd~Vlv~~~~ 105 (446)
T 2x3l_A 56 EEVILKSMKQVEK-HSDYD----------GYFLVNGTTSGILSVIQSFSQ-------------------KKGDILMARNV 105 (446)
T ss_dssp SSHHHHHHHHHCS-CTTEE----------EEEESSHHHHHHHHHHHTTTT-------------------SSSCEEECTTC
T ss_pred chHHHHHHHHHHh-cCCCc----------eEEEeCCHHHHHHHHHHHhcC-------------------CCCEEEEecCc
Confidence 3456778889999 98753 368899999999988876511 12258889999
Q ss_pred chhHHHHHHhCCCceEEEec--CCC----CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcC
Q psy13453 641 NSSVEKSAIIGDVPVRQLRS--DDN----GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYN 714 (764)
Q Consensus 641 H~Sv~kAa~~lGl~v~~Vp~--d~~----g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~g 714 (764)
|.|+..++...|..++.++. +++ +.+|+++| +.+ .+.+|+++. +|.+|.+.|+++|+++|++||
T Consensus 106 h~s~~~~~~~~G~~~~~v~~~~~~~~~~~~~~d~~~l---~~~------~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~ 175 (446)
T 2x3l_A 106 HKSVLHALDISQQEGHFIETHQSPLTNHYNKVNLSRL---NND------GHKLVVLTY-PNYYGETFNVEEVIKSLHQLN 175 (446)
T ss_dssp CHHHHHHHHHHTCCEEECEEEECTTTSSEEEEEC----------------CCEEEEES-SCTTSCCCCHHHHHHHHHHTT
T ss_pred cHHHHHHHHHcCCeEEEEeCeeccccCcCCCCCHHHH---cCC------CceEEEEEC-CCCCeEecCHHHHHHHHHhcC
Confidence 99999999999999999998 765 78999988 222 244777777 666999999999999999999
Q ss_pred CEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 715 IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 715 lwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+|+|+|+||++...+.+. ....... .+|.++.++||+++.+.++|+++
T Consensus 176 ~~livDea~~~~~~f~~~-~~~~~~~-g~Di~~~S~~K~l~~~~g~g~l~ 223 (446)
T 2x3l_A 176 IPVLIDEAHGAHFGLQGF-PDSTLNY-QADYVVQSFHKTLPALTMGSVLY 223 (446)
T ss_dssp CCEEEECTTCTTTTSTTS-CCCGGGG-TCSEEEECHHHHSSSCTTCEEEE
T ss_pred CeEEEcchhhhhhccCCC-CCChHHc-CCCEEEECCccccccccccEEEE
Confidence 999999999984333332 1111111 36999999999999999999874
No 60
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.56 E-value=3e-14 Score=154.80 Aligned_cols=168 Identities=15% Similarity=0.124 Sum_probs=132.1
Q ss_pred chHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEec
Q psy13453 558 PACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTS 637 (764)
Q Consensus 558 p~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S 637 (764)
+.......++.+.+++++|.+.+ ..+||+|||+++..++.+.+ .. ++..|+++
T Consensus 55 ~~~~~~~~~l~~~la~~~g~~~~---------~v~~~~g~t~a~~~~~~~~~---~~---------------~gd~vl~~ 107 (390)
T 1elu_A 55 QHIQQLIAQLRQALAETFNVDPN---------TITITDNVTTGCDIVLWGLD---WH---------------QGDEILLT 107 (390)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCGG---------GEEEESSHHHHHHHHHHHSC---CC---------------TTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCHH---------HEEEeCChHHHHHHHHhCCC---CC---------------CCCEEEEe
Confidence 33346677888999999998653 58999999999988877552 00 12257788
Q ss_pred CCcchhHHHH----HHhCCCceEEEecC--CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 638 DQSNSSVEKS----AIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 638 ~~aH~Sv~kA----a~~lGl~v~~Vp~d--~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
..+|.+...+ ++..|.+++.+|.+ +++.+|+++|+++|++. +.+|+.+..++.+|.+.|+++|+++|+
T Consensus 108 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~ 181 (390)
T 1elu_A 108 DCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPK------TRLVILSHLLWNTGQVLPLAEIMAVCR 181 (390)
T ss_dssp TTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTT------EEEEEEESBCTTTCCBCCHHHHHHHHH
T ss_pred cCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCC------ceEEEEeccccCCceecCHHHHHHHHh
Confidence 8899886543 56779999999987 68899999999988642 458888999999999999999999999
Q ss_pred ----hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 712 ----EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 712 ----~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+||+|+|+|+||+.+....+ +.. ..+|.++.++|||++.|.++|+++
T Consensus 182 ~~~~~~~~~li~Dea~~~g~~~~~-----~~~-~~~d~~~~s~~K~~~~~~g~G~~~ 232 (390)
T 1elu_A 182 RHQGNYPVRVLVDGAQSAGSLPLD-----FSR-LEVDYYAFTGHKWFAGPAGVGGLY 232 (390)
T ss_dssp HCCSSSCCEEEEECTTTBTTBCCC-----TTT-SCCSEEEEESSSTTCCCTTCEEEE
T ss_pred hhhhhcCcEEEEEcccccCCcCCC-----hhh-cCCCEEEccccccccCCCceEEEE
Confidence 99999999999986533221 111 146999999999999999999864
No 61
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.53 E-value=3.6e-14 Score=159.95 Aligned_cols=215 Identities=9% Similarity=0.056 Sum_probs=151.1
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecC---CCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCchhhhc-----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGL---PDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLNAPVS----- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpv---d~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~~ia~----- 90 (764)
.|+|+.|+++.+|++. +.||+ ++++++|+++|+++|++....+ .+++ |.++|++++|.+||+++|++
T Consensus 185 ~h~s~~~~~~~~G~~~---~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~-~~~~vv~~~~nn~tG~i~~l~~I~~la~~~ 260 (456)
T 2z67_A 185 SHKSPIKAVSFVGMNM---RLVETVLDGDRVYVPVEDIENAIKKEIELG-NRPCVLSTLTFFPPRNSDDIVEIAKICENY 260 (456)
T ss_dssp CCHHHHHHHHHTTCEE---EEECCEEETTEEECCHHHHHHHHHHHHHTT-CCEEEEEESSCCTTBCCCCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCc---eEEEEeccCCCCCcCHHHHHHHHHHHhhCC-CeEEEEEeCCCCCCCCcCCHHHHHHHHHHc
Confidence 6999999999999988 77776 7889999999999994332223 3565 69999999999999999887
Q ss_pred CCCceeccccc-------------------------cc-----c-ceeeeecCCCccccccccccccCCcccCCCC-ccc
Q psy13453 91 NGPLKVGGVLR-------------------------RV-----Y-SSCLVPRGQKSLRTTVLFHFLFQHWQIPLGR-RFR 138 (764)
Q Consensus 91 ~~wlHVDa~l~-------------------------~~-----y-~s~ll~rd~~~l~~~~s~~~d~~d~tle~SR-r~~ 138 (764)
++|+|||++.. ++ + +++++.|+++.+.. + . ....++| ...
T Consensus 261 g~~v~vD~A~~~~~~g~~~~~~~~~~~~~D~~~~s~hK~~~~p~g~G~l~~~~~~~~~~-l--~-----~~~~g~~~~~~ 332 (456)
T 2z67_A 261 DIPHIINGAYAIQNNYYLEKLKKAFKYRVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKE-I--S-----LSYPGRASATP 332 (456)
T ss_dssp TCCEEEECTTTTTCHHHHHHHHHHHTSCCSEEEEEHHHHHCCCSSCEEEEESCHHHHHH-H--H-----TTSCSCBCSHH
T ss_pred CCcEEEECcchHHHHHhhHHHHHhhCCCCCEEEEcCCCCcCCCCCeEEEEEcCHHHHhh-c--C-----cCCCCCCCCCH
Confidence 99999995321 11 1 13444444322211 0 0 1112333 233
Q ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEeCCCCceeEEEEeeccccccccccccCccCCccHH
Q psy13453 139 ALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDD---RFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDL 215 (764)
Q Consensus 139 ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p---~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~ 215 (764)
++++|+++..+|.+||.+++++..++++++.+.|++.+ ++.++ +|+ ++|+|++..+ +.
T Consensus 333 ~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~-~~~-~~v~~~~~~~--------------~~--- 393 (456)
T 2z67_A 333 VVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFL-DVE-SPIASCISVN--------------SD--- 393 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBC-CCC-CSSEEEEECS--------------SC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCEec-CCC-CeEEEEEecc--------------cH---
Confidence 78999999999999999999999999999999999986 76654 455 9999987311 11
Q ss_pred HHHHHHHHHhcCcE--EEE-------ece--eCCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 216 NKAVYDRIIARKVI--YIV-------KGS--FQDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 216 n~~L~~~L~~~G~~--~vs-------~t~--l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
..++.++|.++|.. -+. ... .....++|++ ....+++++++.+++.|+++
T Consensus 394 ~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s-~~~~~t~eeid~~l~~L~~~ 454 (456)
T 2z67_A 394 PVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMN-AAIGVRTEDIVNSVSKLEKI 454 (456)
T ss_dssp HHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEE-CCTTCCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhh-hhcCCCHHHHHHHHHHHHHH
Confidence 34677778887741 111 000 1112468875 44567899999999999764
No 62
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.53 E-value=5.2e-14 Score=153.58 Aligned_cols=193 Identities=9% Similarity=0.010 Sum_probs=140.1
Q ss_pred HHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhcc
Q psy13453 539 VGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQS 618 (764)
Q Consensus 539 lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~ 618 (764)
+.+.+...++.....|...+...++++.+.+|+.+.+|++.+ ....+||+|||+++..++.+...
T Consensus 48 v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~-------~~~v~~~~g~~~a~~~~~~~~~~-------- 112 (388)
T 1j32_A 48 IVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYG-------ADNILVTNGGKQSIFNLMLAMIE-------- 112 (388)
T ss_dssp HHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCC-------GGGEEEESHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCC-------hhhEEEcCCHHHHHHHHHHHhcC--------
Confidence 334444444333334555556788999999999999887432 13689999999999888876521
Q ss_pred CCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 619 KNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 619 ~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
++..|++++.+|.++..+++..|.+++.+|.+. ++.+|+++|+++|++. +-+|+.+..++.
T Consensus 113 -----------~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~np 175 (388)
T 1j32_A 113 -----------PGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPK------TKLLVFNTPSNP 175 (388)
T ss_dssp -----------TTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTT
T ss_pred -----------CCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcC------ceEEEEeCCCCC
Confidence 112578888999999999999999999999874 5789999999998642 447777888899
Q ss_pred cccc---ccHHHHHHHHHhcCCEEEEeccccccccccc---hhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 697 TCAF---DNLEELGPICQEYNIWLHVDAAYAGSALLLP---EYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 697 ~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~---~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+|.+ +++++|+++|++||+|+|+|.+|+.+..-.. .......+....|.+..++||+++.| +.+|++
T Consensus 176 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~ 249 (388)
T 1j32_A 176 TGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFL 249 (388)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEE
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEE
Confidence 9998 6799999999999999999999988543111 11111000123589999999998644 236765
No 63
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.53 E-value=2.9e-13 Score=150.67 Aligned_cols=163 Identities=15% Similarity=0.020 Sum_probs=122.7
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
.....++.+++++++|.+. .+++++||++|+.++.+.. . ++..|+++...
T Consensus 108 ~~~~~~l~~~la~~~g~~~-----------~i~~~sGs~a~~~al~~l~----~---------------~gd~vl~~~~~ 157 (427)
T 2w8t_A 108 FHDHMEVEQALRDFYGTTG-----------AIVFSTGYMANLGIISTLA----G---------------KGEYVILDADS 157 (427)
T ss_dssp CHHHHHHHHHHHHHHTCSE-----------EEEESCHHHHHHHHHHHHS----C---------------TTCEEEEETTC
T ss_pred cHHHHHHHHHHHHHhCCCc-----------eEEecCcHHHHHHHHHHhc----C---------------CCCEEEECCcc
Confidence 3566677788888888753 5788889999988776531 1 12357889999
Q ss_pred chhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEe
Q psy13453 641 NSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVD 720 (764)
Q Consensus 641 H~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVD 720 (764)
|.++..+++..|.+++.+|. +|+++|+++|++... ..+.+|+.+...+.+|.+.|+++|+++|++||+||++|
T Consensus 158 h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~--~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~D 230 (427)
T 2w8t_A 158 HASIYDGCQQGNAEIVRFRH-----NSVEDLDKRLGRLPK--EPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVD 230 (427)
T ss_dssp CHHHHHHHHHSCSEEEEECT-----TCHHHHHHHHHTSCS--SSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHcCCeeEEeCC-----CCHHHHHHHHHhccC--CCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEE
Confidence 99999999999998888773 689999999976321 14667777888889999999999999999999999999
Q ss_pred ccccccccccchhhhh--hcCC-CcccEEEEcCCccCCCCcCceee
Q psy13453 721 AAYAGSALLLPEYAHL--KRGL-EYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 721 aA~Gg~~l~~~~~r~~--l~gi-e~aDSit~d~HK~l~~P~~~g~l 763 (764)
.||+++.+. ++.+.. .-++ ..+|.+..++||+++.| + |++
T Consensus 231 ea~~~~~~~-~~g~~~~~~~~~~~~~di~~~s~sK~~g~~-g-G~v 273 (427)
T 2w8t_A 231 EAHSMGFFG-PNGRGVYEAQGLEGQIDFVVGTFSKSVGTV-G-GFV 273 (427)
T ss_dssp CTTTTTTSS-TTSCCHHHHTTCTTCCSEEEEESSSTTCSC-C-EEE
T ss_pred CCccccccC-CCCCchHhhcCCCcCCcEEEecchhhhccC-C-CEE
Confidence 999986543 111111 1232 25699999999999843 4 554
No 64
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.51 E-value=6.2e-14 Score=151.64 Aligned_cols=159 Identities=13% Similarity=0.086 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS 643 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S 643 (764)
..++.+.+++++|.+ ..+||+|||+|+..++.+++.. . .++..|+++..+|.+
T Consensus 34 ~~~l~~~la~~~~~~-----------~v~~~~ggt~al~~~~~~~~~~-~---------------~~gd~Vl~~~~~~~~ 86 (375)
T 2fnu_A 34 SLLFEEALCEFLGVK-----------HALVFNSATSALLTLYRNFSEF-S---------------ADRNEIITTPISFVA 86 (375)
T ss_dssp HHHHHHHHHHHHTCS-----------EEEEESCHHHHHHHHHHHSSCC-C---------------TTSCEEEECSSSCTH
T ss_pred HHHHHHHHHHHhCCC-----------eEEEeCCHHHHHHHHHHHhccc-C---------------CCCCEEEECCCccHh
Confidence 345666778888864 3789999999998888765210 0 112358889999999
Q ss_pred HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccc
Q psy13453 644 VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAY 723 (764)
Q Consensus 644 v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~ 723 (764)
...++...|++++.+|+++++.+|+++|+++|+++ +-+|+.+.. +|.+.|+++|+++|++||+|+|+|+||
T Consensus 87 ~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~ 157 (375)
T 2fnu_A 87 TANMLLESGYTPVFAGIKNDGNIDELALEKLINER------TKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSH 157 (375)
T ss_dssp HHHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCTT------EEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTT
T ss_pred HHHHHHHCCCEEEEeccCCCCCCCHHHHHhhcCcC------ceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECcc
Confidence 99999999999999999988899999999888543 335555544 899999999999999999999999999
Q ss_pred cccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 724 AGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 724 Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+.+..... + .+..+..++..++++||+++ | |+|.+
T Consensus 158 ~~~~~~~~--~-~~~~~~~i~~~s~s~~K~~~-~-g~g~~ 192 (375)
T 2fnu_A 158 ALGSEYQN--K-KVGGFALASVFSFHAIKPIT-T-AEGGA 192 (375)
T ss_dssp CTTCEETT--E-ETTSSSSEEEEECCTTSSSC-C-SSCEE
T ss_pred ccCCeECC--e-eccccCCeEEEeCCCCCCcc-c-cCceE
Confidence 87654321 1 12222246788889999985 5 67765
No 65
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.50 E-value=1.5e-13 Score=151.10 Aligned_cols=163 Identities=18% Similarity=0.125 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+++++++|.++ ...+||+|||+++..++.+++..... +.. ++-+|+++..+|
T Consensus 71 ~~~~~l~~~la~~~g~~~---------~~v~~~~g~t~al~~al~~~~~~~~~--~~~----------gd~vii~~~~~~ 129 (416)
T 1qz9_A 71 DLSERLGNRLATLIGARD---------GEVVVTDTTSINLFKVLSAALRVQAT--RSP----------ERRVIVTETSNF 129 (416)
T ss_dssp GHHHHHHHHHHTTTTCCT---------TSEEECSCHHHHHHHHHHHHHHHHHH--HST----------TCCEEEEETTSC
T ss_pred HHHHHHHHHHHHHcCCCc---------ccEEEeCChhHHHHHHHHhhcccccc--cCC----------CCcEEEEcCCCC
Confidence 455678899999999864 25789999999987788776532100 000 122577888899
Q ss_pred hhHHHHHH----hC--CCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCC
Q psy13453 642 SSVEKSAI----IG--DVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNI 715 (764)
Q Consensus 642 ~Sv~kAa~----~l--Gl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~gl 715 (764)
.+...++. .. |.+++.||. +++|+++|++ .+.+|+.+..++.+|.+.|+++|+++|++||+
T Consensus 130 ~~~~~~~~~~~~~~~~g~~~~~v~~-------~~~l~~~i~~------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~ 196 (416)
T 1qz9_A 130 PTDLYIAEGLADMLQQGYTLRLVDS-------PEELPQAIDQ------DTAVVMLTHVNYKTGYMHDMQALTALSHECGA 196 (416)
T ss_dssp HHHHHHHHHHHHHHCSSCEEEEESS-------GGGHHHHCST------TEEEEEEESBCTTTCBBCCHHHHHHHHHHHTC
T ss_pred CchHHHHHHHHHHhcCCceEEEeCc-------HHHHHHHhCC------CceEEEEeccccCcccccCHHHHHHHHHHcCC
Confidence 98766543 23 888888886 6778887753 25688999999999999999999999999999
Q ss_pred EEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCc-eeeC
Q psy13453 716 WLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDC-SAMW 764 (764)
Q Consensus 716 wLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~-g~l~ 764 (764)
|+|+|+||+.+....+ ... . .+|.+++++||+++.+.++ |+++
T Consensus 197 ~li~D~a~~~g~~~~~-~~~-~----~~d~~~~s~~K~l~~g~~~~g~l~ 240 (416)
T 1qz9_A 197 LAIWDLAHSAGAVPVD-LHQ-A----GADYAIGCTYKYLNGGPGSQAFVW 240 (416)
T ss_dssp EEEEECTTTTTTSCCC-HHH-H----TCSEEEECSSSTTCCCTTCCCEEE
T ss_pred EEEEEccccccCcCCC-hhh-c----CCCEEEecCcccCCCCCCCeEEEE
Confidence 9999999986544322 111 1 2599999999998877787 8763
No 66
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.50 E-value=2.4e-13 Score=147.88 Aligned_cols=192 Identities=7% Similarity=-0.035 Sum_probs=138.8
Q ss_pred HHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhcc
Q psy13453 539 VGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQS 618 (764)
Q Consensus 539 lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~ 618 (764)
+.+.+...+......|... ..++++.+.+|+++.+|++.+ ....+||+|||+++..++.+.. .
T Consensus 45 v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~-------~~~i~~~~g~~~a~~~~~~~l~----~---- 107 (391)
T 3dzz_A 45 IMASMEEKLKVAAFGYESV--PAEYYKAVADWEEIEHRARPK-------EDWCVFASGVVPAISAMVRQFT----S---- 107 (391)
T ss_dssp HHHHHHHHHTTCCCCCBCC--CHHHHHHHHHHHHHHHSCCCC-------GGGEEEESCHHHHHHHHHHHHS----C----
T ss_pred HHHHHHHHHhcCcCCCCCC--CHHHHHHHHHHHHHHhCCCCC-------HHHEEECCCHHHHHHHHHHHhC----C----
Confidence 3344444454433333322 678999999999999995432 1468899999999988877541 1
Q ss_pred CCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecC---CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccC
Q psy13453 619 KNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSD---DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTT 695 (764)
Q Consensus 619 ~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d---~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT 695 (764)
++..|+++..+|.++..++...|.+++.+|.+ .++.+|+++|+++|++. .+-+|+.+..++
T Consensus 108 -----------~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~i~~p~n 171 (391)
T 3dzz_A 108 -----------PGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATP-----SVRMMVFCNPHN 171 (391)
T ss_dssp -----------TTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTST-----TEEEEEEESSBT
T ss_pred -----------CCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhcc-----CceEEEEECCCC
Confidence 12258889999999999999999999999985 23459999999999631 244777788899
Q ss_pred Ccccc---ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhc-CCCccc--EEEEcCCccCC-CCcCceee
Q psy13453 696 GTCAF---DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKR-GLEYVD--SFDFNTHKWLL-VNFDCSAM 763 (764)
Q Consensus 696 ~~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~-gie~aD--Sit~d~HK~l~-~P~~~g~l 763 (764)
.+|.+ +++++|+++|++||+|+|+|.+|+++............ +.+..| .+..++||+++ ....+|++
T Consensus 172 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~ 246 (391)
T 3dzz_A 172 PIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACA 246 (391)
T ss_dssp TTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEE
T ss_pred CCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEE
Confidence 99999 99999999999999999999999875533211111111 111246 88999999986 44556654
No 67
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.49 E-value=2.2e-13 Score=148.74 Aligned_cols=193 Identities=15% Similarity=0.046 Sum_probs=140.3
Q ss_pred HHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCc-EEEeCChHHHHHHHHHHHHHHHhhhhc
Q psy13453 539 VGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGG-GIIQSTASEATLVSILVAKRKMINHWQ 617 (764)
Q Consensus 539 lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~-GvfTsGgTeANl~Al~aAR~~~~~~~~ 617 (764)
+.+.+...++.....|.......++++.+.+|+.+.+|++.+ ... .++|+|||+++..++.+.. .
T Consensus 44 v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~-------~~~~v~~~~g~~~a~~~~~~~~~----~--- 109 (389)
T 1gd9_A 44 IKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEAD-------PKTEIMVLLGANQAFLMGLSAFL----K--- 109 (389)
T ss_dssp HHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCC-------TTTSEEEESSTTHHHHHHHTTTC----C---
T ss_pred HHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC-------CCCeEEEcCChHHHHHHHHHHhC----C---
Confidence 334444444333334544456788999999999998886421 135 8999999999988876431 0
Q ss_pred cCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccC
Q psy13453 618 SKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTT 695 (764)
Q Consensus 618 ~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT 695 (764)
++..|++++.+|.++..+++..|.+++.+|.++ ++.+|+++|+++++++ +-+|+.+..++
T Consensus 110 ------------~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~n 171 (389)
T 1gd9_A 110 ------------DGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDK------TRALIINSPCN 171 (389)
T ss_dssp ------------TTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCT
T ss_pred ------------CCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCcC------ceEEEEECCCC
Confidence 123578888999999999999999999999975 4679999999998642 34667778888
Q ss_pred Cccccc---cHHHHHHHHHhcCCEEEEeccccccccccchhh--hhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 696 GTCAFD---NLEELGPICQEYNIWLHVDAAYAGSALLLPEYA--HLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 696 ~~GaiD---pl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r--~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
.+|.+- ++++|+++|++||+|+++|.+|+++..-..... ..+.+....|.+..++||+++.| +.+|++
T Consensus 172 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 245 (389)
T 1gd9_A 172 PTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFV 245 (389)
T ss_dssp TTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEE
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEE
Confidence 899885 699999999999999999999998654211011 11223445789999999998744 335665
No 68
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.48 E-value=4.4e-14 Score=153.71 Aligned_cols=163 Identities=15% Similarity=0.038 Sum_probs=120.2
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 554 WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
|..++...++|+ .+++++|.+ ..+||+|||+||..++.+++. .++..
T Consensus 32 ~~~~~~~~~l~~----~la~~~~~~-----------~~i~~~sgt~al~~~l~~l~~------------------~~gd~ 78 (373)
T 3frk_A 32 FILGDEDKKFEQ----EFADYCNVN-----------YCIGCGNGLDALHLILKGYDI------------------GFGDE 78 (373)
T ss_dssp CSSSHHHHHHHH----HHHHHHTSS-----------EEEEESCHHHHHHHHHHHTTC------------------CTTCE
T ss_pred ccCCchHHHHHH----HHHHHhCCC-----------eEEEeCCHHHHHHHHHHHcCC------------------CCcCE
Confidence 444555555555 556666654 379999999999888875410 11235
Q ss_pred EEecCCcchhHHHHHHhCCCceEEEecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh
Q psy13453 634 AYTSDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE 712 (764)
Q Consensus 634 i~~S~~aH~Sv~kAa~~lGl~v~~Vp~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~ 712 (764)
|+++..+|.++..++...|.+++.++++ +++.+|+++|+++|+++ +.+|+ .++.+|.+.|+++|+++|++
T Consensus 79 Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~---~~n~~G~~~~l~~i~~l~~~ 149 (373)
T 3frk_A 79 VIVPSNTFIATALAVSYTGAKPIFVEPDIRTYNIDPSLIESAITEK------TKAII---AVHLYGQPADMDEIKRIAKK 149 (373)
T ss_dssp EEEETTSCTHHHHHHHHHSCEEEEECEETTTTEECGGGTGGGCCTT------EEEEE---EECCTTCCCCHHHHHHHHHH
T ss_pred EEECCCCcHHHHHHHHHcCCEEEEEeccccccCcCHHHHHHhcCCC------CeEEE---EECCCcCcccHHHHHHHHHH
Confidence 8899999999999999999999999998 67899999999988653 33555 45689999999999999999
Q ss_pred cCCEEEEeccccccccccchhhhhhcCCCcccEEEEc--CCccCCCCcCceee
Q psy13453 713 YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFN--THKWLLVNFDCSAM 763 (764)
Q Consensus 713 ~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d--~HK~l~~P~~~g~l 763 (764)
||+|+|+|+||+.+..+..+ . -| ..+|.++++ .||+++.+...|++
T Consensus 150 ~~~~li~D~a~~~g~~~~~~--~--~~-~~~d~~~~S~~~~K~l~~~g~gg~~ 197 (373)
T 3frk_A 150 YNLKLIEDAAQAHGSLYKGM--K--VG-SLGDAAGFSFYPAKNLGSLGDGGAV 197 (373)
T ss_dssp HTCEEEEECTTCTTCEETTE--E--TT-SSSSEEEEECCTTSSSCCSSSCEEE
T ss_pred cCCEEEEECCcccCCEECCE--e--cc-ccccEEEEeCcCCCccCccceeEEE
Confidence 99999999999876543221 1 11 124777777 77999763445554
No 69
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.48 E-value=3.3e-13 Score=151.24 Aligned_cols=180 Identities=12% Similarity=0.099 Sum_probs=118.4
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCce
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKL 632 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~ 632 (764)
.|...+...++ .+++++++|.+ ..+||+|||+||..++.+++...... +....
T Consensus 71 ~y~~~~~~~~l----~~~la~~~~~~-----------~v~~t~ggt~A~~~al~~~~~~~~~~-----------Gd~~~- 123 (467)
T 1ax4_A 71 AYAGSRNYYDL----KDKAKELFNYD-----------YIIPAHQGRGAENILFPVLLKYKQKE-----------GKAKN- 123 (467)
T ss_dssp CSSSCHHHHHH----HHHHHHHHCCC-----------EEEEESSHHHHHHHHHHHHHHHHHHT-----------TCCSS-
T ss_pred ccccCccHHHH----HHHHHHHcCCC-----------cEEEcCCcHHHHHHHHHHHHHhhccC-----------CCccc-
Confidence 45445554444 45667777753 47999999999999999887632111 00011
Q ss_pred EEEecCCcchh-HHHHHHhCCCceEEEecC----------CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCc-ccc
Q psy13453 633 VAYTSDQSNSS-VEKSAIIGDVPVRQLRSD----------DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGT-CAF 700 (764)
Q Consensus 633 vi~~S~~aH~S-v~kAa~~lGl~v~~Vp~d----------~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~-Gai 700 (764)
.|+++ ..||. ...++...|..++.++.+ .++.+|+++|+++|++.. ...+.+|+.+..++.+ |.+
T Consensus 124 ~viv~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~--~~~~~~vi~~~~~np~gG~~ 200 (467)
T 1ax4_A 124 PVFIS-NFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG--ADNIVAIVSTVTCNSAGGQP 200 (467)
T ss_dssp CEEEE-SSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC--GGGEEEEEEESSBTTTTSBC
T ss_pred eEEEe-ccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcC--CCCeeEEEEeccccCCCccC
Confidence 24555 66744 456677788887766542 156899999999998642 1125577777777777 654
Q ss_pred ---ccHHHHHHHHHhcCCEEEEeccccc-cccccchhhhhhcCC----------CcccEEEEcCCccCCCCcCceee
Q psy13453 701 ---DNLEELGPICQEYNIWLHVDAAYAG-SALLLPEYAHLKRGL----------EYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 701 ---Dpl~eIa~i~~~~glwLHVDaA~Gg-~~l~~~~~r~~l~gi----------e~aDSit~d~HK~l~~P~~~g~l 763 (764)
+++++|+++|++||+|||+|++++. +..+.++......|+ +.+|.+++++||+++.|.| |++
T Consensus 201 ~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~ 276 (467)
T 1ax4_A 201 VSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIG-GLV 276 (467)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSC-EEE
T ss_pred CChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCCCCcc-eEE
Confidence 7899999999999999999998654 222111100001111 3469999999999998855 443
No 70
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.48 E-value=3.3e-13 Score=147.41 Aligned_cols=164 Identities=15% Similarity=0.110 Sum_probs=120.1
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 554 WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
+..++...++++ .+++++|.+. .+++++||+|+..++.+.+ .. ++..
T Consensus 34 ~~~~~~~~~l~~----~la~~~~~~~-----------~i~~~sGt~al~~~l~~l~---~~---------------~gd~ 80 (388)
T 1b9h_A 34 RMGGDEVNSFER----EFAAHHGAAH-----------ALAVTNGTHALELALQVMG---VG---------------PGTE 80 (388)
T ss_dssp TTTCSHHHHHHH----HHHHHTTCSE-----------EEEESCHHHHHHHHHHHTT---CC---------------TTCE
T ss_pred ecCCHHHHHHHH----HHHHHhCCCe-----------EEEeCCHHHHHHHHHHHcC---CC---------------CcCE
Confidence 344455555554 5666677642 4666667999988887541 00 1235
Q ss_pred EEecCCcchhHHHHHHhCCCceEEEecCC-CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh
Q psy13453 634 AYTSDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE 712 (764)
Q Consensus 634 i~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~-~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~ 712 (764)
|+++..+|.+...++...|..++.+|+++ ++.+|+++|+++|+++ +.+|+ .++.+|.+.|+++|+++|++
T Consensus 81 Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~---~~n~tG~~~~l~~i~~la~~ 151 (388)
T 1b9h_A 81 VIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPR------TKVIM---PVHMAGLMADMDALAKISAD 151 (388)
T ss_dssp EEEESSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTT------EEEEC---CBCGGGCCCCHHHHHHHHHH
T ss_pred EEECCCccHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcC------ceEEE---EeCCccCcCCHHHHHHHHHH
Confidence 88899999999999999999999999986 4899999999998543 33444 67789999999999999999
Q ss_pred cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 713 YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 713 ~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
||+|+|+|+||+.+....... +..+..++..+++.||++..+. +|++
T Consensus 152 ~~~~li~D~a~~~g~~~~~~~---~~~~~~i~~~S~s~~K~l~g~~-~G~~ 198 (388)
T 1b9h_A 152 TGVPLLQDAAHAHGARWQGKR---VGELDSIATFSFQNGKLMTAGE-GGAV 198 (388)
T ss_dssp HTCCBCEECTTCTTCEETTEE---GGGSSSCEEEECCTTSSSCSSS-CEEE
T ss_pred cCCEEEEecchhcCCccCCee---cccccceEEEEccCCCcccCCC-eEEE
Confidence 999999999998654432111 1112246899999999997654 5654
No 71
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.48 E-value=4.9e-13 Score=146.50 Aligned_cols=168 Identities=13% Similarity=0.024 Sum_probs=125.5
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEE
Q psy13453 555 LSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVA 634 (764)
Q Consensus 555 ~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi 634 (764)
..++.+.++.+++.+++++++|.+. ..+||+|||+++..++... .. +-.|
T Consensus 28 h~~~~~~~~~~~~~~~l~~~~~~~~----------~v~~~~sgt~a~~~~~~~~-----~~---------------gd~v 77 (379)
T 3ke3_A 28 HMSKAFQEVMNDLLSNLKTVYNAEA----------AVIIPGSGTYGMEAVARQL-----TI---------------DEDC 77 (379)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHTCSE----------EEEEESCHHHHHHHHHHHH-----CT---------------TCEE
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCCC----------EEEEcCChhHHHHHHHHhC-----CC---------------CCeE
Confidence 3477888899999999999999863 4688999999988765321 11 1135
Q ss_pred EecCCcchhH--HHHHHhCCC--ceEEEecCCC---------CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc
Q psy13453 635 YTSDQSNSSV--EKSAIIGDV--PVRQLRSDDN---------GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD 701 (764)
Q Consensus 635 ~~S~~aH~Sv--~kAa~~lGl--~v~~Vp~d~~---------g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD 701 (764)
++++.+|++. ...+...|+ .++.++++.. +.+|+++|+++|++. .+-+|+++..+|.+|.+.
T Consensus 78 i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~~~~G~~~ 152 (379)
T 3ke3_A 78 LIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKED-----KSAIVYAPHVETSSGIIL 152 (379)
T ss_dssp EEEECSHHHHHHHHHHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHH-----TCSEEEEESEETTTTEEC
T ss_pred EEEeCCchhHHHHHHHHHhCCCCceEEEeccccccccccCCCCCCCHHHHHHHHhhc-----CCcEEEEEeecCCCceeC
Confidence 5666677653 334455564 6778887542 369999999999653 134788899999999999
Q ss_pred c---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 702 N---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 702 p---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
| +++|+++|++||+++|+|++++ +.....- .-.| +|.++.++|||++.|.++|+++
T Consensus 153 ~~~~l~~i~~~~~~~~~~li~D~~~~-g~~~~~~---~~~~---~d~~~~s~~K~l~~~~g~g~~~ 211 (379)
T 3ke3_A 153 SEEYIKALSEAVHSVGGLLVIDCIAS-GCVWLDM---KELG---IDVLISAPQKGWSSTPCAGLVM 211 (379)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTC-TTCCCCH---HHHT---CSEEEECTTTTTCSCCCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEEEeccc-CCccccc---cccC---CCEEEecchhhcCCCCceEEEE
Confidence 9 9999999999999999999998 4332221 1113 4999999999999999998874
No 72
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.47 E-value=4.9e-13 Score=146.55 Aligned_cols=193 Identities=10% Similarity=-0.042 Sum_probs=141.4
Q ss_pred HHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhc
Q psy13453 538 IVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQ 617 (764)
Q Consensus 538 ~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~ 617 (764)
.+.+.+...+......|...+...++++.+.+|+.+.+|.+-+ ....++|+|||+++..++.+.. .
T Consensus 58 ~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~-------~~~v~~~~g~t~al~~~~~~l~----~--- 123 (389)
T 1o4s_A 58 PVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDIS-------PDQVVVTNGAKQALFNAFMALL----D--- 123 (389)
T ss_dssp HHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCC-------GGGEEEESHHHHHHHHHHHHHC----C---
T ss_pred HHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-------HHHEEEecCHHHHHHHHHHHhC----C---
Confidence 3444555555433334544556788999999999998887421 1368999999999988877541 1
Q ss_pred cCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccC
Q psy13453 618 SKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTT 695 (764)
Q Consensus 618 ~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT 695 (764)
++..|++++.+|.++..+++..|.+++.+|.++ ++.+|+++|+++|++. +-+|+.+..++
T Consensus 124 ------------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~n 185 (389)
T 1o4s_A 124 ------------PGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGK------TKAVLINSPNN 185 (389)
T ss_dssp ------------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTT------EEEEEEESSCT
T ss_pred ------------CCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccC------ceEEEEcCCCC
Confidence 112577888999999999999999999999974 5689999999988642 34667788888
Q ss_pred Cccccc---cHHHHHHHHHhcCCEEEEecccccccccc--chhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 696 GTCAFD---NLEELGPICQEYNIWLHVDAAYAGSALLL--PEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 696 ~~GaiD---pl~eIa~i~~~~glwLHVDaA~Gg~~l~~--~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
.+|.+- ++++|+++|++||+|+++|.+|+.+..-. +... .+.+....|.+..++||+++.| +.+|++
T Consensus 186 ptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~l 258 (389)
T 1o4s_A 186 PTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSIL-DVSEGFDRIVYINGFSKSHSMTGWRVGYL 258 (389)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHH-HHCSSSTTEEEEEESTTTTTCGGGCCEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHh-hcCCCCCcEEEEeechhhcCCcccceEEE
Confidence 999984 59999999999999999999999765321 1111 2233345699999999999733 236765
No 73
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.46 E-value=1.3e-12 Score=141.46 Aligned_cols=221 Identities=12% Similarity=0.092 Sum_probs=163.9
Q ss_pred ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc
Q psy13453 11 AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS 90 (764)
Q Consensus 11 ~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~ 90 (764)
.+.++. .|+++.++++.+|+.. +.||+++++++|+++|+++|++. ++.+++.+.+++++|.++|++++++
T Consensus 126 vl~~~~---~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~i~~~----~~~~v~~~~~~nptG~~~~l~~i~~ 195 (397)
T 3f9t_A 126 IIVPIT---AHFSFEKGREMMDLEY---IYAPIKEDYTIDEKFVKDAVEDY----DVDGIIGIAGTTELGTIDNIEELSK 195 (397)
T ss_dssp EEEETT---CCTHHHHHHHHHTCEE---EEECBCTTSSBCHHHHHHHHHHS----CCCEEEEEBSCTTTCCBCCHHHHHH
T ss_pred EEECCc---chhHHHHHHHHcCcee---EEEeeCCCCcCCHHHHHHHHhhc----CCeEEEEECCCCCCCCCCCHHHHHH
Confidence 344444 6899999999999976 99999999999999999999872 2335577889999999999999886
Q ss_pred -----CCCceecccccc-----------------c----------------c------ceeeeecCCCcccccccccccc
Q psy13453 91 -----NGPLKVGGVLRR-----------------V----------------Y------SSCLVPRGQKSLRTTVLFHFLF 126 (764)
Q Consensus 91 -----~~wlHVDa~l~~-----------------~----------------y------~s~ll~rd~~~l~~~~s~~~d~ 126 (764)
++|+|+|++... . + +++++.+++.... .+.....+
T Consensus 196 l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~~-~~~~~~~~ 274 (397)
T 3f9t_A 196 IAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKMGHCPIPSGGILFKDIGYKR-YLDVDAPY 274 (397)
T ss_dssp HHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGGTCSEEECCTTTTTCCCSSCEEEEESSGGGGG-GTCEECTT
T ss_pred HHHHhCCeEEEEccccchhhhhcccccccccccccccccccCCeEEEccccccCCCCCceEEEEeCHHHHH-hhccCCcc
Confidence 899999996421 0 0 0122232221111 00000001
Q ss_pred ----CCcccCCCC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccc
Q psy13453 127 ----QHWQIPLGR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKL 201 (764)
Q Consensus 127 ----~d~tle~SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~ 201 (764)
...++.++| ....+.+|+++..++.+++.+++++..++++++.+.|++. +++++.+|..++++|+..
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~------- 346 (397)
T 3f9t_A 275 LTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN-NFKPVIEPILNIVAIEDE------- 346 (397)
T ss_dssp SSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCCSSSEEEEECT-------
T ss_pred ccCCCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEcCCCccEEEEEeC-------
Confidence 122344666 4567799999999999999999999999999999999998 999889999999999753
Q ss_pred cccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 202 DNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 202 ~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
+ ..++.++|.++|..+... ..+.++|+++. ..+++++++.+++.|+++.
T Consensus 347 ---------~----~~~~~~~l~~~gi~v~~~---~~~~~~Ri~~~-~~~~~e~i~~~~~~l~~~l 395 (397)
T 3f9t_A 347 ---------D----YKEVCKKLRDRGIYVSVC---NCVKALRIVVM-PHIKREHIDNFIEILNSIK 395 (397)
T ss_dssp ---------T----HHHHHHHHHHTTCBCEEC---SSSSEEEEECC-TTCCHHHHHHHHHHHHHHC
T ss_pred ---------C----HHHHHHHHHhCCeEEecc---CCCCEEEEEEc-CCCCHHHHHHHHHHHHHhh
Confidence 1 357888888899743322 23478999766 6678999999999998764
No 74
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.46 E-value=8.1e-13 Score=144.10 Aligned_cols=167 Identities=13% Similarity=0.012 Sum_probs=127.3
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
.....++.+++++++|.+. .+++++||+++..++.+.. . ++..|+++..+
T Consensus 87 ~~~~~~l~~~la~~~~~~~-----------~i~~~sGt~a~~~~l~~~~----~---------------~gd~v~~~~~~ 136 (399)
T 3tqx_A 87 QTIHKELEKDISEFLGTDD-----------TILYSSCFDANGGLFETLL----G---------------PEDAIISDELN 136 (399)
T ss_dssp BHHHHHHHHHHHHHHTCSE-----------EEEESCHHHHHHTTHHHHC----C---------------TTCEEEEETTC
T ss_pred chHHHHHHHHHHHHHCCCc-----------EEEECchHHHHHHHHHHhc----C---------------CCCEEEECCcc
Confidence 3556667788888888753 4677778999887765431 1 12368889999
Q ss_pred chhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEe
Q psy13453 641 NSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVD 720 (764)
Q Consensus 641 H~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVD 720 (764)
|.+...+++..|.+++.+|. +|+++|+++|++...+|..+.+|+.+..++.+|.+.|+++|+++|++||+|+|+|
T Consensus 137 ~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D 211 (399)
T 3tqx_A 137 HASIIDGIRLCKAQRYRYKN-----NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVD 211 (399)
T ss_dssp CHHHHHHHHSCCSEEEEECT-----TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHcCCceeEeCC-----CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEE
Confidence 99999999999999988886 5788999999887666667889999999999999999999999999999999999
Q ss_pred ccccccccccc-hhhhhhcCC-CcccEEEEcCCccCCCCcCceee
Q psy13453 721 AAYAGSALLLP-EYAHLKRGL-EYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 721 aA~Gg~~l~~~-~~r~~l~gi-e~aDSit~d~HK~l~~P~~~g~l 763 (764)
.+|+.++.... .......++ ...|.++.++||+++.+.+ |++
T Consensus 212 e~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~ 255 (399)
T 3tqx_A 212 DSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASG-GYT 255 (399)
T ss_dssp CTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCC-EEE
T ss_pred CCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCce-EEE
Confidence 99974332111 011112232 4569999999999985544 554
No 75
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.46 E-value=2.5e-13 Score=150.38 Aligned_cols=160 Identities=12% Similarity=0.140 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
.+-.++.+++++++|.+. .+|+++||+++..++.+.+ .. ++..|+++..+|
T Consensus 42 ~l~~~l~~~la~~~g~~~-----------~i~~~~gt~al~~~~~~~~---~~---------------~gd~Vl~~~~~~ 92 (418)
T 2c81_A 42 SMERKFAKAFADFNGVPY-----------CVPTTSGSTALMLALEALG---IG---------------EGDEVIVPSLTW 92 (418)
T ss_dssp CHHHHHHHHHHHHHTCSE-----------EEEESCHHHHHHHHHHHTT---CC---------------TTCEEEEESSSC
T ss_pred HHHHHHHHHHHHHhCCCc-----------EEEeCCHHHHHHHHHHHcC---CC---------------CcCEEEECCCcc
Confidence 344556678888888752 5899999999988877542 00 122588899999
Q ss_pred hhHHHHHHhCCCceEEEecCC-CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEe
Q psy13453 642 SSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVD 720 (764)
Q Consensus 642 ~Sv~kAa~~lGl~v~~Vp~d~-~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVD 720 (764)
.+...++...|.+++.+|+++ ++.+|+++|+++|++. +-+|+. ++.+|...|+++|+++|++||+|+|+|
T Consensus 93 ~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~---~~~~G~~~~~~~i~~~~~~~~~~li~D 163 (418)
T 2c81_A 93 IATATAVLNVNALPVFVDVEADTYCIDPQLIKSAITDK------TKAIIP---VHLFGSMANMDEINEIAQEHNLFVIED 163 (418)
T ss_dssp THHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCTT------EEEECC---BCCTTCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HhHHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCCC------CeEEEE---eCCcCCcccHHHHHHHHHHCCCEEEEE
Confidence 999999999999999999986 7899999999988643 334543 347899999999999999999999999
Q ss_pred ccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 721 AAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 721 aA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+||+.+..+..+ . +..+..++..++++||+++.. .+|++
T Consensus 164 ~a~~~~~~~~~~--~-~~~~~~~~~~s~s~~K~~~~g-~~g~~ 202 (418)
T 2c81_A 164 CAQSHGSVWNNQ--R-AGTIGDIGAFSCQQGKVLTAG-EGGII 202 (418)
T ss_dssp CTTCTTCEETTE--E-TTSSSSEEEEECCTTSSSCSS-SCEEE
T ss_pred CcccccCccCCE--e-cccccceEEEeccCCcccCCC-CeEEE
Confidence 999987532211 1 112224577777789999863 55554
No 76
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.46 E-value=1.1e-13 Score=150.44 Aligned_cols=176 Identities=14% Similarity=0.044 Sum_probs=125.5
Q ss_pred HHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhcc
Q psy13453 539 VGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQS 618 (764)
Q Consensus 539 lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~ 618 (764)
+.+.+...+... .+..++...++| +.+++++|.+ ..+||+|||+|+..++.+++.
T Consensus 18 v~~a~~~~~~~~--~~~~~~~~~~l~----~~la~~~~~~-----------~~~~~~sGt~al~~al~~~~~-------- 72 (367)
T 3nyt_A 18 IDAGIQRVLRHG--QYILGPEVTELE----DRLADFVGAK-----------YCISCANGTDALQIVQMALGV-------- 72 (367)
T ss_dssp HHHHHHHHHHHC--CCSSCHHHHHHH----HHHHHHHTCS-----------EEEEESCHHHHHHHHHHHTTC--------
T ss_pred HHHHHHHHHhcC--CccCChHHHHHH----HHHHHHhCCC-----------cEEEeCCHHHHHHHHHHHhCC--------
Confidence 334444444332 233556655555 4566666764 379999999999988876520
Q ss_pred CCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCC-CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCc
Q psy13453 619 KNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDN-GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGT 697 (764)
Q Consensus 619 ~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~-g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~ 697 (764)
.++..|+++..+|.+...++...|..++.++++++ +.+|+++|+++|+++ +.+|+ .++.+
T Consensus 73 ----------~~gd~Vi~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~---~~~~~ 133 (367)
T 3nyt_A 73 ----------GPGDEVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPR------TKAII---PVSLY 133 (367)
T ss_dssp ----------CTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGTGGGCCTT------EEEEC---CBCGG
T ss_pred ----------CCcCEEEECCCccHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHhcCcC------CcEEE---eeCCc
Confidence 11235888999999999999999999999999865 899999999998543 33444 56789
Q ss_pred cccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEc--CCccCCCCcCceee
Q psy13453 698 CAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFN--THKWLLVNFDCSAM 763 (764)
Q Consensus 698 GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d--~HK~l~~P~~~g~l 763 (764)
|...|+++|+++|++||+++|+|+||+.+.....+.. |. ..|.++++ +||+++.+-..|++
T Consensus 134 G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~----~~-~~di~~~Sf~~~K~l~~~g~gg~~ 196 (367)
T 3nyt_A 134 GQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRS----CN-LSTVACTSFFPSAPLGCYGDGGAI 196 (367)
T ss_dssp GCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTEET----TS-SSSEEEEECCTTSSSCCSSCCEEE
T ss_pred cChhhHHHHHHHHHHcCCEEEEECccccCCeECCeec----cC-CCCEEEEECCCCCcCCCcCceeEE
Confidence 9999999999999999999999999986544322111 11 12667777 59999873335554
No 77
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.46 E-value=3.2e-13 Score=146.35 Aligned_cols=176 Identities=14% Similarity=0.106 Sum_probs=128.3
Q ss_pred HHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhcc
Q psy13453 539 VGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQS 618 (764)
Q Consensus 539 lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~ 618 (764)
+.+.+...+... .|...+...++ .+.+++++|.+ ..+||+|||+|+..++.+++ .
T Consensus 21 ~~~~~~~~~~~~--~~~~~~~~~~l----~~~la~~~~~~-----------~~~~~~~gt~a~~~~~~~~~---~----- 75 (374)
T 3uwc_A 21 YLNDLREFIKTA--DFTLGAELEKF----EKRFAALHNAP-----------HAIGVGTGTDALAMSFKMLN---I----- 75 (374)
T ss_dssp HHHHHHHHHHHT--CCSSCHHHHHH----HHHHHHHTTCS-----------EEEEESCHHHHHHHHHHHTT---C-----
T ss_pred HHHHHHHHHHcC--CcccChhHHHH----HHHHHHHhCCC-----------cEEEeCCHHHHHHHHHHHcC---C-----
Confidence 555555544432 23344544444 45677777764 37899999999888776542 0
Q ss_pred CCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcc
Q psy13453 619 KNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTC 698 (764)
Q Consensus 619 ~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~G 698 (764)
.++..|+++..+|.+...++...|++++.+|+++++.+|+++|++++++. +.+|+ .++.+|
T Consensus 76 ----------~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~---~~n~~G 136 (374)
T 3uwc_A 76 ----------GAGDEVITCANTFIASVGAIVQAGATPVLVDSENGYVIDPEKIEAAITDK------TKAIM---PVHYTG 136 (374)
T ss_dssp ----------CTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTSSBCGGGTGGGCCTT------EEEEC---CBCGGG
T ss_pred ----------CCCCEEEECCCccHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHhCCCC------ceEEE---EeCCcC
Confidence 11235788999999999999999999999999988999999999988653 33444 677899
Q ss_pred ccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCC--ccCCCCcCceee
Q psy13453 699 AFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTH--KWLLVNFDCSAM 763 (764)
Q Consensus 699 aiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~H--K~l~~P~~~g~l 763 (764)
.+.|+++|+++|++||+|+|+|+||+.+..+..+.. + ..+|.+++++| |+++.+-.+|++
T Consensus 137 ~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~----~-~~~d~~~~s~~~~K~l~~~g~~g~~ 198 (374)
T 3uwc_A 137 NIADMPALAKIAKKHNLHIVEDACQTILGRINDKFV----G-SWGQFACFSLHPLKNLNVWSDAGVI 198 (374)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEET----T-SSSSEEEEECSSSSSSCCSSCCEEE
T ss_pred CcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCeec----c-ccccEEEEeCCCCCcCCccceeEEE
Confidence 999999999999999999999999987654322111 1 12599999988 999863335554
No 78
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.46 E-value=2e-13 Score=155.11 Aligned_cols=175 Identities=17% Similarity=0.071 Sum_probs=120.7
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 554 WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
|..++...++|+.+.+++++++|.+.+ .+...++.++|+++|+.++.+.. . +...
T Consensus 82 y~~~~~~~~le~~~~~~~a~~~g~~~~------~~~~~V~~~sGs~an~~~~~all----~---------------pGD~ 136 (483)
T 1rv3_A 82 YGGTEHIDELETLCQKRALQAYGLDPQ------CWGVNVQPYSGSPANFAVYTALV----E---------------PHGR 136 (483)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTTCCTT------TEEEECCCSSHHHHHHHHHHHHT----C---------------TTCE
T ss_pred cCcchhHHHHHHHHHHHHHHHhCCCcc------cCceEEEECCcHHHHHHHHHHhc----C---------------CCCE
Confidence 445667789999999999999998742 00022444445588877665431 1 1225
Q ss_pred EEecCCcchhHHHH--------HHhCCCceEEEec--C-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc
Q psy13453 634 AYTSDQSNSSVEKS--------AIIGDVPVRQLRS--D-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN 702 (764)
Q Consensus 634 i~~S~~aH~Sv~kA--------a~~lGl~v~~Vp~--d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp 702 (764)
|++++.+|.+.... +...|..++.|+. | +++.+|+++|++++++. .|-+|++ ..++.+ .+.|
T Consensus 137 Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~-----~tklIi~-~~sn~~-~~~d 209 (483)
T 1rv3_A 137 IMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLF-----HPKLIIA-GTSCYS-RNLD 209 (483)
T ss_dssp EEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHH-----CCSEEEE-CCSSCC-SCCC
T ss_pred EEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhhc-----CCcEEEE-eCCcCC-CcCC
Confidence 77788778766432 2233433555554 6 67899999999999843 2446666 444444 8889
Q ss_pred HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 703 LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 703 l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+++|++||++||+|+|+|+||+.+......+...+ +.+|.++.++||++..|.+ |+++
T Consensus 210 l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~---~~~div~~s~~K~l~Gprg-G~i~ 267 (483)
T 1rv3_A 210 YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPF---EHCHVVTTTTHKTLRGCRA-GMIF 267 (483)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGG---GTCSEEEEESSGGGCCCSC-EEEE
T ss_pred HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCC---CCCcEEEecCcccCCCCCc-eEEE
Confidence 99999999999999999999886655433222222 2579999999999988988 7763
No 79
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.46 E-value=5e-13 Score=147.26 Aligned_cols=156 Identities=11% Similarity=0.048 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 560 CTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 560 ~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
......++.+++++++|.+. .+++++||+|+..++.+... ++..|+++..
T Consensus 62 ~~~~~~~l~~~la~~~g~~~-----------~i~~~sG~~a~~~~l~~~~~-------------------~gd~vi~~~~ 111 (398)
T 2rfv_A 62 GNPTTDALEKKLAVLERGEA-----------GLATASGISAITTTLLTLCQ-------------------QGDHIVSASA 111 (398)
T ss_dssp CCHHHHHHHHHHHHHHTCSE-----------EEEESSHHHHHHHHHHHHCC-------------------TTCEEEEESS
T ss_pred CChHHHHHHHHHHHHhCCCc-----------EEEECCHHHHHHHHHHHHhC-------------------CCCEEEEcCC
Confidence 34556667788999988752 57888899999888876521 1225788899
Q ss_pred cchhHHHHH----HhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCC
Q psy13453 640 SNSSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNI 715 (764)
Q Consensus 640 aH~Sv~kAa----~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~gl 715 (764)
+|.+...++ ...|..++.+|.+ |+++|+++|+++ +.+|+++..++.+|.+.|+++|+++|++||+
T Consensus 112 ~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~ 180 (398)
T 2rfv_A 112 IYGCTHAFLSHSMPKFGINVRFVDAA-----KPEEIRAAMRPE------TKVVYIETPANPTLSLVDIETVAGIAHQQGA 180 (398)
T ss_dssp SCHHHHHHHHTHHHHTTCEEEEECTT-----SHHHHHHHCCTT------EEEEEEESSBTTTTBCCCHHHHHHHHHHTTC
T ss_pred CcccHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCC
Confidence 999988876 7789999999875 799999888643 4588889999999999999999999999999
Q ss_pred EEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC--ceee
Q psy13453 716 WLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD--CSAM 763 (764)
Q Consensus 716 wLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~--~g~l 763 (764)
|+|+|.+|+.+....+. .+ .+|.++.++||+++.|.+ +|++
T Consensus 181 ~li~De~~~~~~~~~~~---~~----~~di~~~s~sK~~~~~g~~~~G~~ 223 (398)
T 2rfv_A 181 LLVVDNTFMSPYCQQPL---QL----GADIVVHSVTKYINGHGDVIGGII 223 (398)
T ss_dssp EEEEECTTTCTTTCCGG---GG----TCSEEEEETTTTTTCSSCCCCEEE
T ss_pred EEEEECCCcccccCCch---hh----CCcEEEEeCcccccCCCCceEEEE
Confidence 99999999976543321 11 369999999999988876 5765
No 80
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.45 E-value=6.8e-13 Score=145.29 Aligned_cols=179 Identities=11% Similarity=0.051 Sum_probs=134.2
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 554 WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
|...+....+.+++.+++++.+|.+.+ .....+||+|||+++..++.+.. . ++..
T Consensus 74 y~~~~g~~~l~~~l~~~l~~~~g~~~~------~~~~i~~~~g~~~a~~~~~~~l~----~---------------~gd~ 128 (407)
T 3nra_A 74 YTEYRGDLGIRDLLAPRLAAFTGAPVD------ARDGLIITPGTQGALFLAVAATV----A---------------RGDK 128 (407)
T ss_dssp SCCTTCCHHHHHHHHHHHHHHHTSCCC------TTTSEEEESHHHHHHHHHHHTTC----C---------------TTCE
T ss_pred cCCCCCCHHHHHHHHHHHHHHhCCCCC------CCCcEEEeCCcHHHHHHHHHHhC----C---------------CCCE
Confidence 444556778999999999999998521 01358999999999988776431 0 1235
Q ss_pred EEecCCcchhHHHHHHhCCCceEEEec------CCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HH
Q psy13453 634 AYTSDQSNSSVEKSAIIGDVPVRQLRS------DDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LE 704 (764)
Q Consensus 634 i~~S~~aH~Sv~kAa~~lGl~v~~Vp~------d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~ 704 (764)
|+++..+|.++..+++..|.+++.+|. ++++.+|+++|+++|++. +.+|+.+..++.+|.+-| ++
T Consensus 129 vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~ 202 (407)
T 3nra_A 129 VAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAG------ARVFLFSNPNNPAGVVYSAEEIG 202 (407)
T ss_dssp EEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTT------CCEEEEESSCTTTCCCCCHHHHH
T ss_pred EEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhC------CcEEEEcCCCCCCCcccCHHHHH
Confidence 788899999999999999999999998 478899999999999763 346777888999999977 99
Q ss_pred HHHHHHHhcCCEEEEeccccccccccchhhhh--hc-CCCcccEEEEcCCccCCCC-cCceee
Q psy13453 705 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHL--KR-GLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 705 eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~--l~-gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+|+++|++||+|+++|.||+++..-...+... +. .....+-+..++||+++.| ..+|++
T Consensus 203 ~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~ 265 (407)
T 3nra_A 203 QIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVA 265 (407)
T ss_dssp HHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEE
T ss_pred HHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEE
Confidence 99999999999999999998754321111110 11 1123467888999999844 455654
No 81
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.45 E-value=1.6e-13 Score=163.19 Aligned_cols=170 Identities=14% Similarity=0.027 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS 643 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S 643 (764)
-.++.+.+++++|.+. ..++++|+|++|..++.+... +...|+++..+|.|
T Consensus 175 i~e~e~~lA~~~gae~----------~i~v~nGtt~an~~ai~al~~-------------------pGD~VLv~~~~H~S 225 (730)
T 1c4k_A 175 AVAAEKHAARVYNADK----------TYFVLGGSSNANNTVTSALVS-------------------NGDLVLFDRNNHKS 225 (730)
T ss_dssp HHHHHHHHHHHTTCSE----------EEEESSHHHHHHHHHHHHHCC-------------------TTCEEEEETTCCHH
T ss_pred HHHHHHHHHHHHCCCc----------EEEECCHHHHHHHHHHHHhcC-------------------CCCEEEEcCCchHH
Confidence 3456678899999865 245677777998888765311 12358899999999
Q ss_pred HHHH-HHhCCCceEEEecCCC-----CcccHHHH-----HHHHHHh-hh--cCCCc-eEEEEeeccCCccccccHHHHHH
Q psy13453 644 VEKS-AIIGDVPVRQLRSDDN-----GVLRGDAL-----LTAVKED-LA--KGLIP-CCLIATLGTTGTCAFDNLEELGP 708 (764)
Q Consensus 644 v~kA-a~~lGl~v~~Vp~d~~-----g~md~~~L-----e~~I~~~-~~--~G~~p-~~VvataGTT~~GaiDpl~eIa~ 708 (764)
+..+ +...|..++.++.+.+ |.+|+++| +++|++. .+ ....| -+|+++.+| .+|.+.|+++|++
T Consensus 226 ~~~~~~~l~Ga~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn-~~G~v~dl~~I~~ 304 (730)
T 1c4k_A 226 VYNSALAMAGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGT-YDGTIYNAHEVVK 304 (730)
T ss_dssp HHHHHTTTTCCEEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBC-TTSEEECHHHHHH
T ss_pred HHHHHHHHCCCEEEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCC-CCCeecCHHHHHH
Confidence 9998 7888999888887532 56899999 7776543 11 01123 467777764 6999999999999
Q ss_pred HHHhcCCEEEEeccccccccccchhhh--hhcC-CCccc----EEEEcCCccCCCCcCceee
Q psy13453 709 ICQEYNIWLHVDAAYAGSALLLPEYAH--LKRG-LEYVD----SFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 709 i~~~~glwLHVDaA~Gg~~l~~~~~r~--~l~g-ie~aD----Sit~d~HK~l~~P~~~g~l 763 (764)
+|++||+|+|||+||++++.+.+.++. .+.- -..+| .++.++||+++.|.++|++
T Consensus 305 la~~~g~~livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I 366 (730)
T 1c4k_A 305 RIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQI 366 (730)
T ss_dssp HHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEE
T ss_pred HHHHcCCeEEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEE
Confidence 999999999999999876666554431 1110 01357 9999999999998888876
No 82
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.44 E-value=3e-13 Score=148.07 Aligned_cols=156 Identities=11% Similarity=0.036 Sum_probs=117.3
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
++.+.+++++|.+ .++||+|||+|+..++.+++ . .++..|+++..+|.+..
T Consensus 60 ~l~~~la~~~~~~-----------~~i~~~~gt~al~~~l~~~~---~---------------~~gd~vl~~~~~~~~~~ 110 (391)
T 3dr4_A 60 EFEKAFADYCGVK-----------HAIACNNGTTALHLALVAMG---I---------------GPGDEVIVPSLTYIASA 110 (391)
T ss_dssp HHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHHHT---C---------------CTTCEEEEESSSCTHHH
T ss_pred HHHHHHHHHhCCC-----------cEEEeCCHHHHHHHHHHHcC---C---------------CCcCEEEECCCchHHHH
Confidence 3445566666664 37999999999988887652 0 01235888999999999
Q ss_pred HHHHhCCCceEEEecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEecccc
Q psy13453 646 KSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYA 724 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~G 724 (764)
.++...|.+++.++++ +++.+|+++|+++++++ +.+|+ .++.+|.+.|+++|+++|++||+|+++|+||+
T Consensus 111 ~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D~a~~ 181 (391)
T 3dr4_A 111 NSVTYCGATPVLVDNDPRTFNLDAAKLEALITPR------TKAIM---PVHLYGQICDMDPILEVARRHNLLVIEDAAEA 181 (391)
T ss_dssp HHHHHTTCEEEEECBCTTTCSBCGGGSGGGCCTT------EEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTC
T ss_pred HHHHHCCCEEEEEecCccccCcCHHHHHHhcCCC------ceEEE---EECCCCChhhHHHHHHHHHHcCCEEEEECccc
Confidence 9999999999999998 67899999999988643 33444 35689999999999999999999999999998
Q ss_pred ccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 725 GSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 725 g~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
.+....+... ..+..++.++++.||+++.+. .|++
T Consensus 182 ~g~~~~~~~~---~~~~di~~~S~s~~K~l~~g~-gg~~ 216 (391)
T 3dr4_A 182 VGATYRGKKS---GSLGDCATFSFFGNAIITTGE-GGMI 216 (391)
T ss_dssp TTCEETTEET---TSSSSEEEEECBTTSSSCCBS-CEEE
T ss_pred ccceECCeee---cccCCEEEEECCCCCcCCcCC-eEEE
Confidence 7655443211 112235777777999997644 4443
No 83
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.44 E-value=3e-13 Score=149.33 Aligned_cols=190 Identities=14% Similarity=0.043 Sum_probs=139.5
Q ss_pred HHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhcc
Q psy13453 539 VGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQS 618 (764)
Q Consensus 539 lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~ 618 (764)
+.+.+ ..+......|...+...++++.+.+|+.+.+|++.+ ....++|+|||+++..++.+.. .
T Consensus 61 v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~-------~~~v~~~~g~t~a~~~~~~~~~----~---- 124 (409)
T 2gb3_A 61 FFERI-YENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVK-------PENVLVTNGGSEAILFSFAVIA----N---- 124 (409)
T ss_dssp HHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCC-------GGGEEEESHHHHHHHHHHHHHC----C----
T ss_pred HHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC-------HHHEEEeCCHHHHHHHHHHHhC----C----
Confidence 33444 555443334555556789999999999998886532 1468999999999998887641 1
Q ss_pred CCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 619 KNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 619 ~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
++..|++++.+|.++..++...|.+++.+|.++ ++.+ +++|+++|++. +-+|+.+..++.
T Consensus 125 -----------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~~~------~~~v~~~~p~np 186 (409)
T 2gb3_A 125 -----------PGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFINER------TKGIVLSNPCNP 186 (409)
T ss_dssp -----------TTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCCTT------EEEEEEESSCTT
T ss_pred -----------CCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhCcC------CeEEEECCCCCC
Confidence 122578888999999999999999999999974 4455 88888877542 446777888888
Q ss_pred cccc---ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 697 TCAF---DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 697 ~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+|.+ +++++|+++|++||+|+++|.+|+++..-. +....+.++...|.++.++||+++.| +.+|++
T Consensus 187 tG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~ 256 (409)
T 2gb3_A 187 TGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRG-EFASALSIESDKVVVIDSVSKKFSACGARVGCL 256 (409)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCC-CCCCccccCCCCEEEEecchhccCCccceEEEE
Confidence 9988 579999999999999999999999854321 11111345555699999999999744 236665
No 84
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.44 E-value=2.5e-12 Score=141.13 Aligned_cols=182 Identities=19% Similarity=0.084 Sum_probs=131.6
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 554 WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
|...+...++++.+.+|+.+.+|++.+ ....+||+|||+++..++.+++. ++..
T Consensus 71 y~~~~~~~~l~~~la~~~~~~~g~~~~-------~~~v~~t~g~t~a~~~~~~~~~~-------------------~gd~ 124 (407)
T 2zc0_A 71 YTPANGIPELREELAAFLKKYDHLEVS-------PENIVITIGGTGALDLLGRVLID-------------------PGDV 124 (407)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHSCCCCC-------GGGEEEESHHHHHHHHHHHHHCC-------------------TTCE
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCC-------cceEEEecCHHHHHHHHHHHhcC-------------------CCCE
Confidence 544456788999999999988886422 13678999999999888876521 0124
Q ss_pred EEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEE-EEeeccCCccccccHH---HHHHH
Q psy13453 634 AYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCL-IATLGTTGTCAFDNLE---ELGPI 709 (764)
Q Consensus 634 i~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~V-vataGTT~~GaiDpl~---eIa~i 709 (764)
|++...+|.+...++...|.+++.+|.++++ +|+++|+++|++...++..+-+| +....++.+|.+-|++ +|+++
T Consensus 125 vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~ 203 (407)
T 2zc0_A 125 VITENPSYINTLLAFEQLGAKIEGVPVDNDG-MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEI 203 (407)
T ss_dssp EEEEESCCHHHHHHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHH
T ss_pred EEEeCCChHHHHHHHHHcCCEEEEcccCCCC-CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHH
Confidence 7788889999999999999999999998766 99999999998433232234454 4567788899998887 99999
Q ss_pred HHhcCCEEEEeccccccccccchhhhhhcCC--CcccEEEEcCCccCCCCcCceee
Q psy13453 710 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGL--EYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 710 ~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gi--e~aDSit~d~HK~l~~P~~~g~l 763 (764)
|++||+|+|+|.+|+++..-..... .+..+ ...+-+..++||+++.-+.+|++
T Consensus 204 ~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~ 258 (407)
T 2zc0_A 204 ASKYDLLIIEDTAYNFMRYEGGDIV-PLKALDNEGRVIVAGTLSKVLGTGFRIGWI 258 (407)
T ss_dssp HHHHTCEEEEECTTTTSBSSCSSCC-CGGGGCSSCCEEEEEESTTTTCTTSCCEEE
T ss_pred HHHcCCEEEEECCCcccccCCCCCC-ChhhcCCCCCEEEEcccccccCCCcceEEE
Confidence 9999999999999998643211100 01111 11235677899999932347765
No 85
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.44 E-value=6.6e-13 Score=147.35 Aligned_cols=155 Identities=14% Similarity=0.096 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 560 CTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 560 ~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
......++.+++++++|.+ ..+||+|||+||..++.+.. . ++..|+++..
T Consensus 54 ~~~~~~~l~~~la~~~g~~-----------~~~~~~~gt~a~~~al~~l~----~---------------~gd~vi~~~~ 103 (412)
T 2cb1_A 54 KDPTAKALEERLKALEGAL-----------EAVVLASGQAATFAALLALL----R---------------PGDEVVAAKG 103 (412)
T ss_dssp CCHHHHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHTTC----C---------------TTCEEEEETT
T ss_pred CChHHHHHHHHHHHHhCCC-----------cEEEECCHHHHHHHHHHHHh----C---------------CCCEEEEeCC
Confidence 3344556667888888864 37899999999998887541 1 1225778889
Q ss_pred cchhHHHHHH----hCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCC
Q psy13453 640 SNSSVEKSAI----IGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNI 715 (764)
Q Consensus 640 aH~Sv~kAa~----~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~gl 715 (764)
+|.+...++. ..|++++.+++| +++|+++|+++ +.+|+.+..++.+|.+.|+++|+++|++||+
T Consensus 104 ~~~~~~~~~~~~~~~~g~~~~~~~~~------~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~ 171 (412)
T 2cb1_A 104 LFGQTIGLFGQVLSLMGVTVRYVDPE------PEAVREALSAK------TRAVFVETVANPALLVPDLEALATLAEEAGV 171 (412)
T ss_dssp CCHHHHHHHHHTTTTTTCEEEEECSS------HHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTC
T ss_pred CchhHHHHHHHHHHHcCCEEEEECCC------HHHHHHHhccC------CeEEEEeCCCCCCcccccHHHHHHHHHHcCC
Confidence 9988777643 468888888864 88898888653 4588889999999999999999999999999
Q ss_pred EEEEecccccc-ccccchhhhhhcCCCcccEEEEcCCccCCCCcC-ceee
Q psy13453 716 WLHVDAAYAGS-ALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD-CSAM 763 (764)
Q Consensus 716 wLHVDaA~Gg~-~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~-~g~l 763 (764)
|+|+|++|+.+ ....+ . -. .+|.++.++||+++.|.+ .|.+
T Consensus 172 ~li~D~~~~~~~~~~~~-~---~~---~~di~~~S~~K~~~~~~~~~G~~ 214 (412)
T 2cb1_A 172 ALVVDNTFGAAGALCRP-L---AW---GAHVVVESLTKWASGHGSVLGGA 214 (412)
T ss_dssp EEEEECGGGTTTTSCCG-G---GG---TCSEEEEETTTTTTCSSCCCCEE
T ss_pred EEEEECCCccccccCCc-c---cc---CCeEEEECCcccccCCCCcEEEE
Confidence 99999999886 32222 1 11 369999999999998876 5544
No 86
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.43 E-value=1.2e-12 Score=143.93 Aligned_cols=160 Identities=17% Similarity=0.091 Sum_probs=120.2
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
++.+.+++++|.+ ..+||+|||+|+..++.+.+ .. ++..|+++..+|.+..
T Consensus 36 ~l~~~la~~~~~~-----------~v~~~~ggt~al~~~~~~l~---~~---------------~gd~Vl~~~~~~~~~~ 86 (394)
T 1o69_A 36 RFEQSVKDYSKSE-----------NALALNSATAALHLALRVAG---VK---------------QDDIVLASSFTFIASV 86 (394)
T ss_dssp HHHHHHHHHHCCS-----------EEEEESCHHHHHHHHHHHTT---CC---------------TTCEEEEESSSCGGGT
T ss_pred HHHHHHHHHhCCC-----------cEEEeCCHHHHHHHHHHHcC---CC---------------CCCEEEECCCccHHHH
Confidence 3445566666652 47999999999988887641 00 1225888999999999
Q ss_pred HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccc
Q psy13453 646 KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAG 725 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg 725 (764)
.++...|..++.+|+++++.+|+++|+++|++.. ..+-+|+++. .+|..+|+++|+++|++||+|+|+|+||+.
T Consensus 87 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~---~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~ 160 (394)
T 1o69_A 87 APICYLKAKPVFIDCDETYNIDVDLLKLAIKECE---KKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEAL 160 (394)
T ss_dssp HHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCS---SCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCT
T ss_pred HHHHHcCCEEEEEEeCCCCCcCHHHHHHHHhccc---CCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcc
Confidence 9999999999999999889999999999997631 1233555553 689999999999999999999999999984
Q ss_pred cccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 726 SALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 726 ~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+..+.... ...+..+|.++++.||.++ |.++|+++
T Consensus 161 g~~~~~~~---~~~~~~~~~~s~s~~K~l~-~~~~G~~~ 195 (394)
T 1o69_A 161 GSFYKNKA---LGTFGEFGVYSYNGNKIIT-TSGGGMLI 195 (394)
T ss_dssp TCEETTEE---TTSSSSEEEEECCTTSSSC-CSSCEEEE
T ss_pred cceeCCcc---cccccCcEEEEEeCCccCC-CCCceEEE
Confidence 33332211 1112347999999999776 77888763
No 87
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.43 E-value=4.7e-13 Score=147.61 Aligned_cols=193 Identities=14% Similarity=0.042 Sum_probs=139.5
Q ss_pred HHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCC-cEEEeCChHHHHHHHHHHHHHHHhhhhc
Q psy13453 539 VGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPG-GGIIQSTASEATLVSILVAKRKMINHWQ 617 (764)
Q Consensus 539 lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~-~GvfTsGgTeANl~Al~aAR~~~~~~~~ 617 (764)
+.+.+...++.....|.......++++.+.+|+.+.+|++.+ .. ..+||+|||+++..++.+...
T Consensus 43 v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~-------~~~~v~~t~g~~~al~~~~~~~~~------- 108 (411)
T 2o0r_A 43 MLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYD-------PETEVLVTVGATEAIAAAVLGLVE------- 108 (411)
T ss_dssp HHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCC-------TTTSEEEEEHHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCC-------CCceEEEeCCHHHHHHHHHHHhcC-------
Confidence 444444444432334544455688999999999999887532 13 589999999999888775421
Q ss_pred cCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCC---CCcccHHHHHHHHHHhhhcCCCceEEEEeecc
Q psy13453 618 SKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD---NGVLRGDALLTAVKEDLAKGLIPCCLIATLGT 694 (764)
Q Consensus 618 ~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~---~g~md~~~Le~~I~~~~~~G~~p~~VvataGT 694 (764)
++..|+++..+|.++..++...|.+++.+|.+. ++.+|+++|+++|++. +-+|+.+..+
T Consensus 109 ------------~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~~~ 170 (411)
T 2o0r_A 109 ------------PGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPR------TRALIINSPH 170 (411)
T ss_dssp ------------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTT------EEEEEEESSC
T ss_pred ------------CCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccC------ceEEEEeCCC
Confidence 112578888999999999999999999999875 3679999999998542 4477777888
Q ss_pred CCcccc---ccHHHHHHHHHhcCCEEEEeccccccccccchhh--hhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 695 TGTCAF---DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYA--HLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 695 T~~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r--~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+.+|.+ +++++|+++|++||+|+++|.+|+++..-..... ..+.+....|.+..++||+++.| +.+|++
T Consensus 171 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 245 (411)
T 2o0r_A 171 NPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWA 245 (411)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEE
Confidence 999998 4579999999999999999999987543211100 11122235699999999988733 236765
No 88
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.43 E-value=7.7e-13 Score=144.35 Aligned_cols=194 Identities=11% Similarity=0.027 Sum_probs=138.9
Q ss_pred HHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCC-cEEEeCChHHHHHHHHHHHHHHHhhhh
Q psy13453 538 IVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPG-GGIIQSTASEATLVSILVAKRKMINHW 616 (764)
Q Consensus 538 ~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~-~GvfTsGgTeANl~Al~aAR~~~~~~~ 616 (764)
.+.+.+...++.....|...+...++++.+.+|+.+.+|.+.+ .. ..+||+|||+++..++.+.. .
T Consensus 47 ~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~-------~~~~v~~~~g~~~a~~~~~~~~~----~-- 113 (386)
T 1u08_A 47 YLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPD-------ADSDITVTAGATEALYAAITALV----R-- 113 (386)
T ss_dssp HHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCC-------TTTTEEEESSHHHHHHHHHHHHC----C--
T ss_pred HHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCC-------CCCCEEEcCChHHHHHHHHHHhC----C--
Confidence 3444555544432334444445788999999999999887532 13 68999999999988876541 1
Q ss_pred ccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCC-CCcccHHHHHHHHHHhhhcCCCceEEEEeeccC
Q psy13453 617 QSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTT 695 (764)
Q Consensus 617 ~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~-~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT 695 (764)
++..|++++.+|.++..+++..|.+++.+|.+. ++.+|+++|+++|++. +-+|+.+..++
T Consensus 114 -------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~p~n 174 (386)
T 1u08_A 114 -------------NGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSER------TRLVILNTPHN 174 (386)
T ss_dssp -------------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTT------EEEEEEESSCT
T ss_pred -------------CCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhccc------CEEEEEeCCCC
Confidence 112477888899999999999999999999975 5889999999988532 44777778889
Q ss_pred Cccccc---cHHHHHHHHHhcCCEEEEeccccccccccchhhhh--hcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 696 GTCAFD---NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHL--KRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 696 ~~GaiD---pl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~--l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
.+|.+- ++++|+++|++||+|+++|.+|+.+..-...+... +.+....|.+..++||+++.| +.+|++
T Consensus 175 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 248 (386)
T 1u08_A 175 PSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYC 248 (386)
T ss_dssp TTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEE
T ss_pred CCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEE
Confidence 999986 57999999999999999999998753311111000 111123589999999999743 236665
No 89
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.43 E-value=1.4e-12 Score=142.82 Aligned_cols=165 Identities=15% Similarity=0.051 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 560 CTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 560 ~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
...+..++.+++++++|.+ ..++|+|||+++..++.+... ++..|+++..
T Consensus 86 ~~~~~~~l~~~la~~~g~~-----------~v~~~~ggt~a~~~~~~~~~~-------------------~gd~V~~~~p 135 (398)
T 3a2b_A 86 TLDIHVELEEKLSAYVGKE-----------AAILFSTGFQSNLGPLSCLMG-------------------RNDYILLDER 135 (398)
T ss_dssp CCHHHHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHHSSC-------------------TTCEEEEETT
T ss_pred CcHHHHHHHHHHHHHhCCC-----------cEEEECCHHHHHHHHHHHHhC-------------------CCCEEEECCc
Confidence 3467778889999999863 379999999999888775411 1235788999
Q ss_pred cchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEE
Q psy13453 640 SNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHV 719 (764)
Q Consensus 640 aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHV 719 (764)
+|.+...++...|.+++.+|. +|+++|++++++... + .+.+|+.+..++.+|.+.|+++|+++|++||+|+++
T Consensus 136 ~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~~~~-~-~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~ 208 (398)
T 3a2b_A 136 DHASIIDGSRLSFSKVIKYGH-----NNMEDLRAKLSRLPE-D-SAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMV 208 (398)
T ss_dssp CCHHHHHHHHHSSSEEEEECT-----TCHHHHHHHHHTSCS-S-SCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEE
T ss_pred cCHHHHHHHHHcCCceEEeCC-----CCHHHHHHHHHhhcc-C-CceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEE
Confidence 999999999999999998886 689999999976321 1 355777777888899999999999999999999999
Q ss_pred eccccccccc-cchhhhhhcCC-CcccEEEEcCCccCCCCcCceee
Q psy13453 720 DAAYAGSALL-LPEYAHLKRGL-EYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 720 DaA~Gg~~l~-~~~~r~~l~gi-e~aDSit~d~HK~l~~P~~~g~l 763 (764)
|.+|+.+..- ....-....|+ +++|.++.++||+++ |.| |++
T Consensus 209 De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~G-G~~ 252 (398)
T 3a2b_A 209 DDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLA-SLG-GFV 252 (398)
T ss_dssp ECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTC-SSC-EEE
T ss_pred ECCCcccccCCCCCchHhhcCCCcCCeEEEeccccccc-CCC-cEE
Confidence 9999765431 11100111233 246999999999998 656 665
No 90
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.42 E-value=2.1e-12 Score=144.62 Aligned_cols=207 Identities=16% Similarity=0.132 Sum_probs=122.3
Q ss_pred CccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHH
Q psy13453 523 PQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATL 602 (764)
Q Consensus 523 P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl 602 (764)
-.|++|..+.+. +.+ .+.+...+......|..++...+++ +++++++|.+ ..+||+|||+||.
T Consensus 41 ~~ylD~~~~~~~-~~v-~~a~~~~l~~~~~~y~~~~~~~~l~----~~la~~~~~~-----------~v~~t~~gt~A~~ 103 (467)
T 2oqx_A 41 DVFIDLLTDSGT-GAV-TQSMQAAMMRGDEAYSGSRSYYALA----ESVKNIFGYQ-----------YTIPTHQGRGAEQ 103 (467)
T ss_dssp GCSEECSCCSSC-SCC-CHHHHHHTTSCCCCSSSCHHHHHHH----HHHHHHHCCS-----------EEEEEC--CCSHH
T ss_pred CeeEecccCCCc-HHH-HHHHHHHhccCcceeccCchhHHHH----HHHHHHhCcC-----------cEEEcCCcHHHHH
Confidence 357777654443 222 2233344433223455556555554 5667777763 4799999999999
Q ss_pred HHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHH-HHhCCCceEEE------ecC----CCCcccHHHH
Q psy13453 603 VSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKS-AIIGDVPVRQL------RSD----DNGVLRGDAL 671 (764)
Q Consensus 603 ~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kA-a~~lGl~v~~V------p~d----~~g~md~~~L 671 (764)
.|+.+++.......+.. .++ .|+++ ..|+....+ ....|..+... +++ .+|.+|+++|
T Consensus 104 ~al~~~~~~~~~~~G~~---------~~d-~Ii~~-~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~L 172 (467)
T 2oqx_A 104 IYIPVLIKKREQEKGLD---------RSK-MVAFS-NYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGL 172 (467)
T ss_dssp HHHHHHHHHHHHHHCCC---------TTT-CEEEE-SSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHH
T ss_pred HHHHHHhccccccCCCC---------ccc-eEEec-ccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHH
Confidence 99999875421110100 001 24455 578654333 33445543332 233 4678999999
Q ss_pred HHHHHHhhhcCCCceEEEEeeccCCc-ccc---ccHHHHHHHHHhcCCEEEEeccccc-ccc--------ccch-hhhhh
Q psy13453 672 LTAVKEDLAKGLIPCCLIATLGTTGT-CAF---DNLEELGPICQEYNIWLHVDAAYAG-SAL--------LLPE-YAHLK 737 (764)
Q Consensus 672 e~~I~~~~~~G~~p~~VvataGTT~~-Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg-~~l--------~~~~-~r~~l 737 (764)
+++|++.. ...+.+|+.+..++.+ |.+ +++++|+++|++||+|||+|+|++. ... .... .....
T Consensus 173 e~~i~~~~--~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~ 250 (467)
T 2oqx_A 173 ERGIEEVG--PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQIT 250 (467)
T ss_dssp HHHHHHHC--GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHH
T ss_pred HHHHHhcC--CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHh
Confidence 99998631 1124567777666666 553 7899999999999999999988765 221 1110 11110
Q ss_pred -cCCCcccEEEEcCCccCCCCcC
Q psy13453 738 -RGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 738 -~gie~aDSit~d~HK~l~~P~~ 759 (764)
...+.+|.+++++||+++.|.|
T Consensus 251 ~~~~~~~d~~~~s~sK~~g~~~G 273 (467)
T 2oqx_A 251 RETYKYADMLAMSAKKDAMVPMG 273 (467)
T ss_dssp HHHGGGCSEEEEESSSTTCCSSC
T ss_pred hhhhccCCeEEEecccccCCCCc
Confidence 0123468999999999998866
No 91
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.42 E-value=1.1e-12 Score=144.38 Aligned_cols=189 Identities=14% Similarity=0.008 Sum_probs=137.0
Q ss_pred HHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccC
Q psy13453 540 GDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSK 619 (764)
Q Consensus 540 ad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~ 619 (764)
.+.+...+......|...+...++++.+.+|+.+..|++.+ ....++|+|||+++..++.+.. .
T Consensus 60 ~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~-------~~~v~~t~g~~~al~~~~~~l~----~----- 123 (406)
T 1xi9_A 60 KEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDIT-------PDDVRVTAAVTEALQLIFGALL----D----- 123 (406)
T ss_dssp HHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCC-------GGGEEEESHHHHHHHHHHHHHC----C-----
T ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCC-------HHHEEEcCChHHHHHHHHHHhC----C-----
Confidence 33344444332234544455688999999999998886542 1468999999999988887641 1
Q ss_pred CCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCc
Q psy13453 620 NPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGT 697 (764)
Q Consensus 620 ~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~ 697 (764)
++..|++++.+|.++..++...|.+++.+|.++ .+.+|+++|+++|++. +-+|+.+..++.+
T Consensus 124 ----------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~npt 187 (406)
T 1xi9_A 124 ----------PGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDR------TKAIAVINPNNPT 187 (406)
T ss_dssp ----------TTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTT------EEEEEEESSCTTT
T ss_pred ----------CCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcC------ceEEEEECCCCCC
Confidence 122578888999999999999999999999874 5679999999998642 4466777888999
Q ss_pred cccc---cHHHHHHHHHhcCCEEEEeccccccccccchh--hhhhcCCCcc-cEEEEcCCccCCCC-cCceee
Q psy13453 698 CAFD---NLEELGPICQEYNIWLHVDAAYAGSALLLPEY--AHLKRGLEYV-DSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 698 GaiD---pl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~--r~~l~gie~a-DSit~d~HK~l~~P-~~~g~l 763 (764)
|.+- ++++|+++|++||+|+++|.+|+++.. .... -..+. ... |-++.++||+++.| +.+|++
T Consensus 188 G~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~-~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~ 257 (406)
T 1xi9_A 188 GALYDKKTLEEILNIAGEYEIPVISDEIYDLMTY-EGEHISPGSLT--KDVPVIVMNGLSKVYFATGWRLGYM 257 (406)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBS-SSCCCCHHHHC--SSSCEEEEEESTTTTCCGGGCCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHcC--CCceEEEEeccccccCCCccEEEEE
Confidence 9874 599999999999999999999998654 2111 01122 234 66788999999733 236665
No 92
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.42 E-value=3e-12 Score=140.22 Aligned_cols=166 Identities=13% Similarity=0.012 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+.+++++|.+. .+++++||+++..++.+.. . ++..|+++..+|
T Consensus 90 ~~~~~l~~~la~~~g~~~-----------~i~~~sGs~a~~~~~~~~~----~---------------~gd~v~~~~~~~ 139 (401)
T 1fc4_A 90 DSHKELEQKLAAFLGMED-----------AILYSSCFDANGGLFETLL----G---------------AEDAIISDALNH 139 (401)
T ss_dssp HHHHHHHHHHHHHHTCSE-----------EEEESCHHHHHHTTHHHHC----C---------------TTCEEEEETTCC
T ss_pred HHHHHHHHHHHHHhCCCc-----------EEEeCChHHHHHHHHHHHc----C---------------CCCEEEEcchhH
Confidence 455667778888888752 4677888999888766531 1 122577888999
Q ss_pred hhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEec
Q psy13453 642 SSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDA 721 (764)
Q Consensus 642 ~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDa 721 (764)
.+...++...|..++.+|. +|+++|+++|++...+|..+.+|+.+..++.+|.+.|+++|+++|++||+|+++|.
T Consensus 140 ~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De 214 (401)
T 1fc4_A 140 ASIIDGVRLCKAKRYRYAN-----NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDD 214 (401)
T ss_dssp HHHHHHHHTSCSEEEEECT-----TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEEC
T ss_pred HHHHHHHHHcCCceEEECC-----CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEEC
Confidence 9999999999999888873 58999999998754444356688888899999999999999999999999999999
Q ss_pred ccccccc-ccchhhhhhcCC-CcccEEEEcCCccCCCCcCceee
Q psy13453 722 AYAGSAL-LLPEYAHLKRGL-EYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 722 A~Gg~~l-~~~~~r~~l~gi-e~aDSit~d~HK~l~~P~~~g~l 763 (764)
+|+.++. ...+......++ ..+|.++.++||+++.+.+ |++
T Consensus 215 ~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~g-G~~ 257 (401)
T 1fc4_A 215 SHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASG-GYT 257 (401)
T ss_dssp TTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC-EEE
T ss_pred cccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCC-EEE
Confidence 9973332 111111111222 2469999999999966665 665
No 93
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.42 E-value=2.4e-14 Score=158.55 Aligned_cols=195 Identities=9% Similarity=-0.067 Sum_probs=126.4
Q ss_pred ccccccCCCCChHHHHHHHHH---HhhcccCcc---ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEE-eCC
Q psy13453 524 QFNAYFPTGSSYPSIVGDMLS---GAFGLIGFS---WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGII-QST 596 (764)
Q Consensus 524 ~~~~~~~~~~~~~~~lad~l~---~~lN~n~~~---~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~Gvf-TsG 596 (764)
.|+.+-.+++.++.++..+.. ...++.... ...++.+.++-.++.+.+++++|.++. ...+| |+|
T Consensus 28 ~yl~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~--------~evif~t~~ 99 (386)
T 3qm2_A 28 VFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSN--------YKVLFCHGG 99 (386)
T ss_dssp CEECCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTT--------EEEEEEESC
T ss_pred CccccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC--------ceEEEEcCC
Confidence 455555455555555544422 223333322 224667778888999999999999752 25788 699
Q ss_pred hHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecC--CCCc-ccHHHHHH
Q psy13453 597 ASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSD--DNGV-LRGDALLT 673 (764)
Q Consensus 597 gTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d--~~g~-md~~~Le~ 673 (764)
||+++..++... ... + ..-+++.++..+|.++ +.++..| .++.||++ ++|. ++++++++
T Consensus 100 ~T~a~n~ai~~l----~~~-----------g-d~v~~~~~~~~~~~~~-~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~ 161 (386)
T 3qm2_A 100 GRGQFAGVPLNL----LGD-----------K-TTADYVDAGYWAASAI-KEAKKYC-APQIIDAKITVDGKRAVKPMREW 161 (386)
T ss_dssp TTHHHHHHHHHH----CTT-----------C-CEEEEEESSHHHHHHH-HHHTTTS-EEEEEECEEEETTEEEECCGGGC
T ss_pred chHHHHHHHHhc----cCC-----------C-CeEEEEeCCHHHHHHH-HHHHHhC-CeEEEecCcccCCCCCCchHHHh
Confidence 999988776533 111 0 0012344445555433 3344568 89999998 7786 89988877
Q ss_pred HHHHhhhcCCCceEEEEeeccCCcccc-ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCc
Q psy13453 674 AVKEDLAKGLIPCCLIATLGTTGTCAF-DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHK 752 (764)
Q Consensus 674 ~I~~~~~~G~~p~~VvataGTT~~Gai-Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK 752 (764)
+|.++ +.+|+.+..+|.+|.+ +||++|+ +|+++||||+++.+....+- +.+ |-+++++||
T Consensus 162 ~l~~~------t~lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv-----~~~---~~~~~s~hK 222 (386)
T 3qm2_A 162 QLSDN------AAYLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDV-----SRY---GVIYAGAQK 222 (386)
T ss_dssp CCCTT------CSCEEECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCG-----GGC---SEEEEETTT
T ss_pred hcCCC------CcEEEEECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCc-----ccc---CEEEEeccc
Confidence 76554 4478899999999995 9999986 89999999999988776642 222 457799999
Q ss_pred cCCCCcCceeeC
Q psy13453 753 WLLVNFDCSAMW 764 (764)
Q Consensus 753 ~l~~P~~~g~l~ 764 (764)
|++ |.|+|++|
T Consensus 223 ~lG-P~G~g~l~ 233 (386)
T 3qm2_A 223 NIG-PAGLTLVI 233 (386)
T ss_dssp TTC-CTTEEEEE
T ss_pred ccC-CCccEEEE
Confidence 996 99999986
No 94
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.42 E-value=5.5e-13 Score=145.27 Aligned_cols=162 Identities=15% Similarity=0.065 Sum_probs=121.3
Q ss_pred HHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHH
Q psy13453 567 VMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEK 646 (764)
Q Consensus 567 v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~k 646 (764)
+.+.+++++|.+++ ..+||+|||+++..++.+... ++..|++++.+|.++..
T Consensus 66 l~~~la~~~~~~~~---------~v~~~~g~~~a~~~~~~~~~~-------------------~gd~Vl~~~~~~~~~~~ 117 (381)
T 1v2d_A 66 LREALAEEFAVEPE---------SVVVTSGATEALYVLLQSLVG-------------------PGDEVVVLEPFFDVYLP 117 (381)
T ss_dssp HHHHHHHHHTSCGG---------GEEEESSHHHHHHHHHHHHCC-------------------TTCEEEEEESCCTTHHH
T ss_pred HHHHHHHhcCCChh---------hEEEcCChHHHHHHHHHHhCC-------------------CCCEEEEcCCCchhHHH
Confidence 44455666777653 589999999999888876521 12257788889999999
Q ss_pred HHHhCCCceEEEecC---CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc---cHHHHHHHHHhcCCEEEEe
Q psy13453 647 SAIIGDVPVRQLRSD---DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD---NLEELGPICQEYNIWLHVD 720 (764)
Q Consensus 647 Aa~~lGl~v~~Vp~d---~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD---pl~eIa~i~~~~glwLHVD 720 (764)
+++..|.+++.+|.+ +++.+|+++|+++|++. +-+|+++..++.+|.+- ++++|+++|++||+|+|+|
T Consensus 118 ~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~D 191 (381)
T 1v2d_A 118 DAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPR------TRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISD 191 (381)
T ss_dssp HHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcC------CEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEE
Confidence 999999999999987 56889999999888532 45777788899999984 5999999999999999999
Q ss_pred ccccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 721 AAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 721 aA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
.+|+++.. .........-....|.+..++||+++.| +.+|++
T Consensus 192 e~~~~~~~-g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~ 234 (381)
T 1v2d_A 192 EVYDELYY-GERPRRLREFAPERTFTVGSAGKRLEATGYRVGWI 234 (381)
T ss_dssp CTTTTCBS-SSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEE
T ss_pred cCcccccc-CCCCCCHHHhcCCCEEEEeechhhcCCcccceEEE
Confidence 99987654 1111111100234699999999998755 236765
No 95
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.42 E-value=7.6e-13 Score=150.86 Aligned_cols=172 Identities=16% Similarity=0.128 Sum_probs=107.2
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..+...++|+.+++++++++|.+.++. +.-+++++||+||+.++.+.. . +...|+
T Consensus 94 G~~~~~~lE~~a~~~~a~l~g~~~~~~------~~~v~~~sGt~An~~al~al~----~---------------pGD~Vl 148 (490)
T 2a7v_A 94 GAEVVDEIELLCQRRALEAFDLDPAQW------GVNVQPYSGSPANLAVYTALL----Q---------------PHDRIM 148 (490)
T ss_dssp ----CTHHHHHHHHHHHHHTTCCTTTE------EEECCCSSHHHHHHHHHHHHC----C---------------SCEECC
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCcccC------ceEEeCCchHHHHHHHHHHHc----C---------------CCCEec
Confidence 345556899999999999999875310 124667799999998887541 1 122455
Q ss_pred ecCCcchh------HHH--HHHhCCCce--EEEecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHH
Q psy13453 636 TSDQSNSS------VEK--SAIIGDVPV--RQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLE 704 (764)
Q Consensus 636 ~S~~aH~S------v~k--Aa~~lGl~v--~~Vp~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~ 704 (764)
++..+|.+ +.. ++...|..+ ..+++| ++|.+|+++|++++.+.+ |-+|++ +.+.+|...|++
T Consensus 149 ~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~~-----~klIi~--~~s~~~~~~dl~ 221 (490)
T 2a7v_A 149 GLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFR-----PRLIIA--GTSAYARLIDYA 221 (490)
T ss_dssp C-------------------------------CCBCTTTCSBCHHHHHHHHHHHC-----CSEEEE--CCSSCCSCCCHH
T ss_pred ccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhcC-----CcEEEE--cCCCCCCcccHH
Confidence 66655533 211 334556544 344455 579999999999997642 334543 455567888999
Q ss_pred HHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 705 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 705 eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+|++||++||++||||+||+.++...+.+...+ +.+|.++.++||+++.|.+ |++
T Consensus 222 ~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~---~~aDiv~~S~hK~l~Gp~G-G~i 276 (490)
T 2a7v_A 222 RMREVCDEVKAHLLADMAHISGLVAAKVIPSPF---KHADIVTTTTHKTLRGARS-GLI 276 (490)
T ss_dssp HHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGG---GTCSEEEEESSGGGCSCSC-EEE
T ss_pred HHHHHHHHcCCEEEEccccccccccCCcCCCCC---CCCCEEEECCcccCccccc-hhe
Confidence 999999999999999999876654432222222 3579999999999988876 654
No 96
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.41 E-value=2.1e-13 Score=149.71 Aligned_cols=191 Identities=13% Similarity=-0.059 Sum_probs=132.5
Q ss_pred ccccccCCCCChHHHHHHHHHHhh----cccCccc---cCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEE-eC
Q psy13453 524 QFNAYFPTGSSYPSIVGDMLSGAF----GLIGFSW---LSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGII-QS 595 (764)
Q Consensus 524 ~~~~~~~~~~~~~~~lad~l~~~l----N~n~~~~---~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~Gvf-Ts 595 (764)
+.+.|.+++...+.-+-+.+...+ ++....+ ..++.+.++-.++.+.+++++|.++. ...+| |+
T Consensus 5 ~~~~f~pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~--------~~v~f~t~ 76 (361)
T 3m5u_A 5 RKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDD--------YEVLFLQG 76 (361)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTT--------EEEEEESS
T ss_pred ceEeecCCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCC--------ceEEEEcC
Confidence 334555555544443334444332 2323322 23667888999999999999999753 35788 99
Q ss_pred ChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCc--ccHHHHHH
Q psy13453 596 TASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGV--LRGDALLT 673 (764)
Q Consensus 596 GgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~--md~~~Le~ 673 (764)
|||+++..++.... +. . ...+++++..+|..+.. ++..|+.++.|+++.+|. ++++. +
T Consensus 77 ~~T~a~n~~~~~~~----~~--~-----------~~~~i~~~~~~~~~~~~-a~~~G~~v~~~~~~~~g~~~~~~~~-~- 136 (361)
T 3m5u_A 77 GASLQFAMIPMNLA----LN--G-----------VCEYANTGVWTKKAIKE-AQILGVNVKTVASSEESNFDHIPRV-E- 136 (361)
T ss_dssp HHHHHHHHHHHHHC----CS--S-----------CEEEEECSHHHHHHHHH-HHHTTCCEEEEEECTTTTSCSCCCC-C-
T ss_pred cHHHHHHHHHHhcC----CC--C-----------eEEEEeCCHHHHHHHHH-HHHcCCceEEEecccCcCCCcCChh-h-
Confidence 99999887766331 11 0 12357777788865544 455689999999998875 57766 3
Q ss_pred HHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCcc
Q psy13453 674 AVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKW 753 (764)
Q Consensus 674 ~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~ 753 (764)
|.++ +.+|..+..+|.+|.+.|. |++ +|+++||||+++.+....+ ++..|.+++++|||
T Consensus 137 -l~~~------t~lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id--------~~~~d~~~~s~~K~ 195 (361)
T 3m5u_A 137 -FSDN------ADYAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVD--------FSNIALFYGGVQKN 195 (361)
T ss_dssp -CCTT------SSEEEEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCC--------CTTEEEEEEETTTT
T ss_pred -cCCC------CCEEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCC--------cccCCEEEEechhc
Confidence 5443 4488889999999998541 454 4999999999998776654 22359999999999
Q ss_pred CCCCcCceeeC
Q psy13453 754 LLVNFDCSAMW 764 (764)
Q Consensus 754 l~~P~~~g~l~ 764 (764)
++ |.|+|++|
T Consensus 196 ~g-p~G~g~l~ 205 (361)
T 3m5u_A 196 AG-ISGLSCIF 205 (361)
T ss_dssp SS-CTTCEEEE
T ss_pred cC-CCccEEEE
Confidence 96 99999986
No 97
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.40 E-value=2.3e-12 Score=141.13 Aligned_cols=168 Identities=15% Similarity=0.071 Sum_probs=116.9
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEE
Q psy13453 555 LSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVA 634 (764)
Q Consensus 555 ~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi 634 (764)
...+...++|+ .+++++|.+ ..+|+++||+||..++.+++... . . +..++..|
T Consensus 31 ~~~~~~~~l~~----~la~~~~~~-----------~~i~~~sGt~a~~~al~~~~~~~--~---~-------~~~~g~~V 83 (390)
T 3b8x_A 31 TMGEYVKQYET----QFAKTFGSK-----------YAVMVSSGSTANLLMIAALFFTK--K---P-------RLKKGDEI 83 (390)
T ss_dssp SSCHHHHHHHH----HHHHHHTCS-----------EEEEESCHHHHHHHHHHHTTSSS--S---C-------SCCTTCEE
T ss_pred CCChHHHHHHH----HHHHHHCCC-----------cEEEECCHHHHHHHHHHHHHhhh--h---c-------CCCCcCEE
Confidence 34555555554 566666764 36899999999999887663110 0 0 01123468
Q ss_pred EecCCcchhHHHHHHhCCCceEEEecCCC-CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc
Q psy13453 635 YTSDQSNSSVEKSAIIGDVPVRQLRSDDN-GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY 713 (764)
Q Consensus 635 ~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~-g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~ 713 (764)
+++..+|.+...++...|..++.+|++++ +.+|+++|+++|+++ +.+|+++ +.+|..+|+++|+++|++|
T Consensus 84 i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~---~~~g~~~~~~~i~~l~~~~ 154 (390)
T 3b8x_A 84 IVPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTDS------TKAILTV---NLLGNPNNFDEINKIIGGR 154 (390)
T ss_dssp EEESSSCHHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCTT------EEEEEEE---CGGGCCCCHHHHHHHHTTS
T ss_pred EECCCCcHHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhCcC------CeEEEEE---CCccChhhHHHHHHHHHHc
Confidence 88999999999999999999999999865 999999999998653 3355554 3578899999999999999
Q ss_pred CCEEEEeccccccccccchhhhhhcCC-CcccEEEEcCCccCCCCcCceee
Q psy13453 714 NIWLHVDAAYAGSALLLPEYAHLKRGL-EYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 714 glwLHVDaA~Gg~~l~~~~~r~~l~gi-e~aDSit~d~HK~l~~P~~~g~l 763 (764)
|+|+|+|+||+.+..... +. -|. ....+++...+|.++.+.+ |++
T Consensus 155 ~~~li~D~a~~~g~~~~~--~~--~g~~~~~~~~s~~~~k~~~~g~g-G~~ 200 (390)
T 3b8x_A 155 DIILLEDNCESMGATFNN--KC--AGTFGLMGTFSSFYSNHIATMEG-GCI 200 (390)
T ss_dssp CCEEEEECTTCTTCEETT--EE--TTSSSSEEEEECCTTSSSCSSSC-EEE
T ss_pred CCEEEEECcCcccCEECC--cc--cccccceEEEEccCCCCCccCCc-eEE
Confidence 999999999996544321 11 121 1234555444444555655 655
No 98
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.40 E-value=1.5e-12 Score=145.23 Aligned_cols=230 Identities=12% Similarity=0.106 Sum_probs=147.9
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecC---CCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcc-cccccCchhhhc----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGL---PDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTL-HQDIQSLNAPVS---- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpv---d~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~-~G~iDpi~~ia~---- 90 (764)
.|-|+.||+.++|+.+ +.|+. ++...||+++||++|++... ..++ |.+..|+. .|++|||+++++
T Consensus 171 ~HKSv~kAliL~Gl~P---v~V~p~~d~~~~~id~e~le~aI~e~ga---~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~ 244 (501)
T 3hl2_A 171 DQKSCFKSMITAGFEP---VVIENVLEGDELRTDLKAVEAKVQELGP---DCILCIHSTTSCFAPRVPDRLEELAVICAN 244 (501)
T ss_dssp CCHHHHHHHHHTTCEE---EEECEEEETTEEEECHHHHHHHHHHHCG---GGEEEEEEECSCCTTBCCCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCeE---EEEeeeecccccCCCHHHHHHHHHhcCC---CcEEEEEecCCCCCCcccccHHHHHHHHHH
Confidence 6999999999999999 77766 56789999999999998621 2333 54444444 467799999997
Q ss_pred -CCCceeccccccc-------------------------------cce-eeeecCCCccccccccccccCCcccCCCC-c
Q psy13453 91 -NGPLKVGGVLRRV-------------------------------YSS-CLVPRGQKSLRTTVLFHFLFQHWQIPLGR-R 136 (764)
Q Consensus 91 -~~wlHVDa~l~~~-------------------------------y~s-~ll~rd~~~l~~~~s~~~d~~d~tle~SR-r 136 (764)
++|+|||.+++.. .++ +++.++++.+... .....|.| +
T Consensus 245 ~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~e~l~~~--------~~~yPGr~S~ 316 (501)
T 3hl2_A 245 YDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEI--------SKMYPGRASA 316 (501)
T ss_dssp HTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCHHHHHHH--------HHTSCSCBCS
T ss_pred cCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccceeecCceEEEeCCHHHHHHH--------HHhCCCCCCC
Confidence 9999999964211 112 3334444333221 11223445 7
Q ss_pred ccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEeCCCCceeEEEEeeccccccccccccCccCCcc
Q psy13453 137 FRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDD---RFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDN 213 (764)
Q Consensus 137 ~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p---~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d 213 (764)
+.++++|++++++|++||+++++++++++++|+++|++.. +-+++..| .|-+.+-..-.... .+...
T Consensus 317 Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~-~n~is~a~tl~~~~---------~~~~~ 386 (501)
T 3hl2_A 317 SPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTP-HNPISLAMTLKTLD---------EHRDK 386 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCT-TCSSEEEEECTTSC---------TTTSC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCC-CCceeEEEeccccc---------ccccc
Confidence 8888999999999999999999999999999999999953 46666555 22233322111110 00111
Q ss_pred HHHHHHHHHHHhcCc---EEEEece---eCC--------------eeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHcc
Q psy13453 214 DLNKAVYDRIIARKV---IYIVKGS---FQD--------------RLFMRFAICSSQTEESDVQLGWNEIRTATEEVLRG 273 (764)
Q Consensus 214 ~~n~~L~~~L~~~G~---~~vs~t~---l~g--------------~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~~ 273 (764)
.+ ..|--.|..++. -++.... +.| ..+|-+ .+-.-++++||+.|++.++++..++.++
T Consensus 387 ~~-t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~-a~aiG~~~~~v~~~~~~l~~~~~~~~~~ 464 (501)
T 3hl2_A 387 AV-TQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNA-ASAIGMKMQDVDLFIKRLDRCLKAVRKE 464 (501)
T ss_dssp HH-HHHHHHHHHTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEE-ECCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred cH-HHHHHHHHhcCCCcceeecCCCceEECCeeecCcccCCCCCCchHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 12 245555555443 2222111 111 123433 3455678999999999999999888766
Q ss_pred CC
Q psy13453 274 KS 275 (764)
Q Consensus 274 ~~ 275 (764)
..
T Consensus 465 ~~ 466 (501)
T 3hl2_A 465 RS 466 (501)
T ss_dssp --
T ss_pred hc
Confidence 53
No 99
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.40 E-value=1.2e-12 Score=144.38 Aligned_cols=154 Identities=12% Similarity=0.028 Sum_probs=118.8
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+.+++++|.+ ..+++++||+||..++.+.. . ++..|+++..+|
T Consensus 65 ~~~~~l~~~la~~~g~~-----------~~i~~~sG~~a~~~~l~~~~----~---------------~gd~vl~~~~~~ 114 (398)
T 1gc0_A 65 PTLNLLEARMASLEGGE-----------AGLALASGMGAITSTLWTLL----R---------------PGDEVLLGNTLY 114 (398)
T ss_dssp HHHHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHHHC----C---------------TTCEEEEESSCC
T ss_pred hHHHHHHHHHHHHhCCC-----------cEEEECCHHHHHHHHHHHHh----c---------------CCCEEEEeCCCc
Confidence 34445556777888764 25788888999988887651 1 122578889999
Q ss_pred hhHHHHH----HhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEE
Q psy13453 642 SSVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWL 717 (764)
Q Consensus 642 ~Sv~kAa----~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwL 717 (764)
.+....+ ...|+.++.++.+ |+++|+++|+++ +.+|+++..++.+|.+.|+++|+++|++||+|+
T Consensus 115 ~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~l 183 (398)
T 1gc0_A 115 GCTFAFLHHGIGEFGVKLRHVDMA-----DLQALEAAMTPA------TRVIYFESPANPNMHMADIAGVAKIARKHGATV 183 (398)
T ss_dssp SHHHHHHHHTGGGGTCEEEEECTT-----CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEE
T ss_pred hhHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCCC------CeEEEEECCCCCCcccccHHHHHHHHHHcCCEE
Confidence 9887776 4568888888764 799999988643 558888899999999999999999999999999
Q ss_pred EEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC--ceee
Q psy13453 718 HVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD--CSAM 763 (764)
Q Consensus 718 HVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~--~g~l 763 (764)
|+|++|+.+....+. -. .+|.++.++||+++.|.+ +|++
T Consensus 184 i~D~~~~~~~~~~~~----~~---~~d~~~~S~sK~~~~~~~~~~G~l 224 (398)
T 1gc0_A 184 VVDNTYCTPYLQRPL----EL---GADLVVHSATKYLSGHGDITAGIV 224 (398)
T ss_dssp EEECTTTHHHHCCGG----GG---TCSEEEEETTTTTTCSSSCCCEEE
T ss_pred EEECCCcccccCCch----hh---CceEEEECCccccCCCCCCeEEEE
Confidence 999999976543321 11 369999999999999876 5765
No 100
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.39 E-value=2e-12 Score=140.65 Aligned_cols=189 Identities=12% Similarity=0.059 Sum_probs=134.8
Q ss_pred HHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhcc
Q psy13453 539 VGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQS 618 (764)
Q Consensus 539 lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~ 618 (764)
+.+.+...+......|.. ...++++++.+++++++|.+.+ ....+||+|||+++..++.+...
T Consensus 50 v~~a~~~~~~~~~~~y~~--~~~~~~~~l~~~l~~~~g~~~~-------~~~v~~~~g~~~a~~~~~~~~~~-------- 112 (391)
T 4dq6_A 50 IIDSLKNRLEQEIYGYTT--RPDSYNESIVNWLYRRHNWKIK-------SEWLIYSPGVIPAISLLINELTK-------- 112 (391)
T ss_dssp HHHHHHHHHTTCCCCCBC--CCHHHHHHHHHHHHHHHCCCCC-------GGGEEEESCHHHHHHHHHHHHSC--------
T ss_pred HHHHHHHHHhCCCCCCCC--CCHHHHHHHHHHHHHHhCCCCc-------HHHeEEcCChHHHHHHHHHHhCC--------
Confidence 334444445433333333 3478999999999999995321 13689999999999888775421
Q ss_pred CCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecC--C--CCcccHHHHHHHHHHhhhcCCCceEEEEeecc
Q psy13453 619 KNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSD--D--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGT 694 (764)
Q Consensus 619 ~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d--~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGT 694 (764)
++..|++...+|.+...++...|.+++.+|.+ + ++.+|+++|+++|++ +-+|+.+..+
T Consensus 113 -----------~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~v~i~~p~ 174 (391)
T 4dq6_A 113 -----------ANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-------VKLFILCNPH 174 (391)
T ss_dssp -----------TTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-------EEEEEEESSB
T ss_pred -----------CCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-------CCEEEEECCC
Confidence 11257888999999999999999999999987 3 346999999999865 3477778889
Q ss_pred CCcccc---ccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCC----cccEEEEcCCccCCCC-cCceee
Q psy13453 695 TGTCAF---DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE----YVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 695 T~~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie----~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+.+|.+ +++++|+++|++||+|+++|.+|+++..--... ..+..+. ...-+..++||+++.| ..+|++
T Consensus 175 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~ 250 (391)
T 4dq6_A 175 NPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKH-IPMASISKEFEKNTITCMAPTKTFNIAGLQSSYV 250 (391)
T ss_dssp TTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCC-CCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEE
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCc-cCHHHcCccccCcEEEEEechhhccCcccceEEE
Confidence 999999 899999999999999999999998754221100 0111110 1136678999998633 455554
No 101
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.39 E-value=1.7e-13 Score=151.28 Aligned_cols=194 Identities=10% Similarity=-0.117 Sum_probs=135.8
Q ss_pred ccccCCCCChHHHHHHHHHHhh---cccCcc---ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEE-eCChH
Q psy13453 526 NAYFPTGSSYPSIVGDMLSGAF---GLIGFS---WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGII-QSTAS 598 (764)
Q Consensus 526 ~~~~~~~~~~~~~lad~l~~~l---N~n~~~---~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~Gvf-TsGgT 598 (764)
++..++.+.++.++..+..... ++.... ...++.+.++-+++++.+++++|.++. ...+| |+|||
T Consensus 16 ~n~at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~--------~evif~t~~~T 87 (377)
T 3e77_A 16 ENLYFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDN--------YKVIFLQGGGC 87 (377)
T ss_dssp CCEECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTT--------EEEEEESSHHH
T ss_pred ccccccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC--------CeEEEEcCchH
Confidence 4555566666676655554433 333332 334678889999999999999999753 35788 58999
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH--HHHHHhCCCceEEEecCCCCcccHHHHHHHHH
Q psy13453 599 EATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV--EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVK 676 (764)
Q Consensus 599 eANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv--~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~ 676 (764)
+++..++..... +. +...+.+....|++. .+.++..|..++.+|++.++..++++++.++.
T Consensus 88 ~a~n~a~~~l~~---~~--------------~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~ 150 (377)
T 3e77_A 88 GQFSAVPLNLIG---LK--------------AGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLN 150 (377)
T ss_dssp HHHHHHHHHHGG---GS--------------TTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCC
T ss_pred HHHHHHHHhccC---CC--------------CCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCCCcCCCCChHHhccC
Confidence 998777653311 10 011244455556653 23344467777888888777788887765554
Q ss_pred HhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC
Q psy13453 677 EDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 677 ~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~ 756 (764)
++ +.+|..+..+|.+|.+.|+ ||+++|+++||||+++.+....+- +.+ |-+++++|||++
T Consensus 151 ~~------t~lV~~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~-----~~~---~~~~~s~~K~~g- 210 (377)
T 3e77_A 151 PD------ASYVYYCANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDV-----SKF---GVIFAGAQKNVG- 210 (377)
T ss_dssp TT------CSCEEEESEETTTTEECSS-----CCCCTTCCEEEECTTTTTSSCCCG-----GGC---SEEEEEGGGTTS-
T ss_pred CC------ccEEEEeCccCchheEchh-----hhccCCCEEEEEcccccCCCCCch-----hhc---CEEEEecccccC-
Confidence 43 4478899999999999999 588999999999999988776642 122 458999999996
Q ss_pred CcCceeeC
Q psy13453 757 NFDCSAMW 764 (764)
Q Consensus 757 P~~~g~l~ 764 (764)
|.|+|++|
T Consensus 211 p~G~g~l~ 218 (377)
T 3e77_A 211 SAGVTVVI 218 (377)
T ss_dssp CTTCEEEE
T ss_pred CCccEEEE
Confidence 99999986
No 102
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.39 E-value=2.2e-12 Score=141.76 Aligned_cols=169 Identities=14% Similarity=0.076 Sum_probs=113.7
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEE
Q psy13453 555 LSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVA 634 (764)
Q Consensus 555 ~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi 634 (764)
...+....+|+.+.+++++++|.+.+ -+++++||++|..++.+.. . +...|
T Consensus 64 ~~~~~~~~~~~~~~~~la~~~g~~~~----------~i~~~sGt~a~~~~~~~~~----~---------------~gd~v 114 (417)
T 3n0l_A 64 GGCEFVDEIETLAIERCKKLFNCKFA----------NVQPNSGSQANQGVYAALI----N---------------PGDKI 114 (417)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHTCSEE----------ECCCSSHHHHHHHHHHHHS----C---------------TTCEE
T ss_pred ccchHHHHHHHHHHHHHHHHhCCCCc----------ceEeccHHHHHHHHHHHhc----C---------------CCCEE
Confidence 34466778999999999999998652 2445556999988876551 1 12247
Q ss_pred EecCCcchhHHH---HHHhCCC--ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHH
Q psy13453 635 YTSDQSNSSVEK---SAIIGDV--PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPI 709 (764)
Q Consensus 635 ~~S~~aH~Sv~k---Aa~~lGl--~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i 709 (764)
+++..+|.+... .....|. .++.+++++++.+|+++|+++|++. .+-+|+.+.++ .|.+.|+++|+++
T Consensus 115 l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~--~G~~~~l~~i~~l 187 (417)
T 3n0l_A 115 LGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKE-----KPKLIVCGASA--YARVIDFAKFREI 187 (417)
T ss_dssp EEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHH-----CCSEEEECCSS--CCSCCCHHHHHHH
T ss_pred EecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhc-----CCeEEEECCcc--cCccCCHHHHHHH
Confidence 778888877654 3333444 4566677778899999999999753 13366666555 4999999999999
Q ss_pred HHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 710 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 710 ~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
|++||+|+++|.||+.+......+... +..+|.++.++||++..|.+ |++
T Consensus 188 ~~~~~~~li~Dea~~~g~~~~~~~~~~---~~~~di~~~s~sK~l~g~~~-G~~ 237 (417)
T 3n0l_A 188 ADEIGAYLFADIAHIAGLVVAGEHPSP---FPYAHVVSSTTHKTLRGPRG-GII 237 (417)
T ss_dssp HHHHTCEEEEECTTTHHHHHTTSSCCC---TTTCSEEEEESSTTTCSCSC-EEE
T ss_pred HHHcCCEEEEECccchhhhhcccCCCc---cccceEEEeeCccccCCCCe-eEE
Confidence 999999999999986555433222211 22469999999999977764 654
No 103
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.39 E-value=1.1e-11 Score=134.78 Aligned_cols=172 Identities=14% Similarity=0.008 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 560 CTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 560 ~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
..++++.+.+|+.+.+|++.+ ....++|+|+|+++..++.+.. . ++..|++.+.
T Consensus 71 ~~~l~~~la~~l~~~~g~~~~-------~~~v~~~~G~~~al~~~~~~l~----~---------------~gd~Vl~~~~ 124 (369)
T 3cq5_A 71 AVELRDELAAYITKQTGVAVT-------RDNLWAANGSNEILQQLLQAFG----G---------------PGRTALGFQP 124 (369)
T ss_dssp CHHHHHHHHHHHHHHHCCCCC-------GGGEEEESHHHHHHHHHHHHHC----S---------------TTCEEEEEES
T ss_pred HHHHHHHHHHhhhhcccCCCC-------hHhEEECCChHHHHHHHHHHhc----C---------------CCCEEEEcCC
Confidence 368999999999998776521 1357899999999877766431 1 1125778889
Q ss_pred cchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEE
Q psy13453 640 SNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHV 719 (764)
Q Consensus 640 aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHV 719 (764)
+|.++..++...|.+++.+|.++++.+|+++|++++++. .+-+|+.+..++.+|.+-|++++.++|+.+++|+++
T Consensus 125 ~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~ 199 (369)
T 3cq5_A 125 SYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAK-----QPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIV 199 (369)
T ss_dssp SCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEE
T ss_pred ChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEE
Confidence 999999999999999999999888899999999999762 134666788899999999999999999999999999
Q ss_pred eccccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 720 DAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 720 DaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
|.+|+.+..- +......+.....+.+..++||+++.| +.+|++
T Consensus 200 De~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 243 (369)
T 3cq5_A 200 DEAYAEFSPS-PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYF 243 (369)
T ss_dssp ECTTGGGCCS-CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEE
T ss_pred ECCchhhcCC-cchHHHHhhCCCCEEEEEechHhcCCcccceEEE
Confidence 9999986532 111222222211358889999999754 235655
No 104
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.38 E-value=1.1e-12 Score=143.58 Aligned_cols=168 Identities=13% Similarity=0.105 Sum_probs=118.8
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..+...++|+.+.+++++++|.+.. -+++++||+++..++.++.. ++..|+
T Consensus 63 ~~~~~~~l~~~~r~~la~~~g~~~~----------~i~~~sGt~a~~~a~~~~~~-------------------~gd~Vl 113 (405)
T 2vi8_A 63 GCEYVDIVEELARERAKQLFGAEHA----------NVQPHSGAQANMAVYFTVLE-------------------HGDTVL 113 (405)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEE----------ECCCSSHHHHHHHHHHHHCC-------------------TTCEEE
T ss_pred cchHHHHHHHHHHHHHHHHhCCCce----------EEEecCcHHHHHHHHHHhcC-------------------CCCEEE
Confidence 4467788999999999999998642 34455669999988876521 112466
Q ss_pred ecCCcchhHHH-H--HHhCCC--ceEEEecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHH
Q psy13453 636 TSDQSNSSVEK-S--AIIGDV--PVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPI 709 (764)
Q Consensus 636 ~S~~aH~Sv~k-A--a~~lGl--~v~~Vp~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i 709 (764)
++..+|.+... + +...|. .++.++++ +++.+|+++|+++|++.. +-+|++ ..++.|...++++|+++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~--~~~~~~~~~~l~~i~~l 186 (405)
T 2vi8_A 114 GMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHR-----PKLIVA--AAAAYPRIIDFAKFREI 186 (405)
T ss_dssp EECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHC-----CSEEEE--CCSSCCSCCCHHHHHHH
T ss_pred EecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHhcC-----CeEEEE--eCCCCCccCCHHHHHHH
Confidence 77778877643 1 122333 66667765 578999999999997631 234544 23456788899999999
Q ss_pred HHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 710 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 710 ~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
|++||+|+|+|++|+.+....+... .+++.+|.++.++||+++.|.| |++
T Consensus 187 ~~~~~~~li~Dea~~~g~~~~~~~~---~~~~~~di~~~s~sK~~~g~~g-G~~ 236 (405)
T 2vi8_A 187 ADEVGAYLMVDMAHIAGLVAAGLHP---NPVPYAHFVTTTTHKTLRGPRG-GMI 236 (405)
T ss_dssp HHHHTCEEEEECTTTHHHHHTTSSC---CSTTTCSEEEEESSSTTCCCSC-EEE
T ss_pred HHHcCCEEEEEccccccccccCcCC---CccccCCEEEEeccccCCCCCC-eEE
Confidence 9999999999999985433222111 2234679999999999988888 775
No 105
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.38 E-value=3.1e-12 Score=141.78 Aligned_cols=183 Identities=12% Similarity=0.049 Sum_probs=130.9
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 552 FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 552 ~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
..|.......++++.+.+|+.+.+|++-+ ....+||+|||+++..++.+... .. +.
T Consensus 76 ~~y~~~~g~~~lr~~la~~~~~~~g~~~~-------~~~i~~t~g~t~al~~~~~~l~~--~~---------------~g 131 (437)
T 3g0t_A 76 SIYPNLDGLPELKQEASRFAKLFVNIDIP-------ARACVPTVGSMQGCFVSFLVANR--TH---------------KN 131 (437)
T ss_dssp GSCCCTTCCHHHHHHHHHHHHHHHCCCCC-------GGGEEEESHHHHHHHHHHHHHTT--SC---------------TT
T ss_pred cCCCCCCChHHHHHHHHHHHHHhhCCCCC-------cccEEEeCCHHHHHHHHHHHHhc--CC---------------CC
Confidence 33444444578999999999988887532 24689999999999888765420 00 11
Q ss_pred e--EEEecCCcchhHHHHHHhCCCceEEEecCC-CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHH
Q psy13453 632 L--VAYTSDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEE 705 (764)
Q Consensus 632 ~--vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~-~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~e 705 (764)
. .|+++.-+|.++..++...|.+++.+|+++ .+.+|+++|+++|+.. .+-+|+.+..++.+|.+-+ +++
T Consensus 132 d~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~nptG~~~~~~~l~~ 206 (437)
T 3g0t_A 132 REYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQTG-----QFCSIIYSNPNNPTWQCMTDEELRI 206 (437)
T ss_dssp CSCCEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTT-----CCCEEEEESSCTTTCCCCCHHHHHH
T ss_pred CccEEEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHhcC-----CceEEEEeCCCCCCCCcCCHHHHHH
Confidence 1 477788999999999999999999999974 4579999999998421 2446777788999998865 777
Q ss_pred HHHHHHhcCCEEEEeccccccccccchhh-------hhhcCCCcccEEEEcCCccCC-CCcCceee
Q psy13453 706 LGPICQEYNIWLHVDAAYAGSALLLPEYA-------HLKRGLEYVDSFDFNTHKWLL-VNFDCSAM 763 (764)
Q Consensus 706 Ia~i~~~~glwLHVDaA~Gg~~l~~~~~r-------~~l~gie~aDSit~d~HK~l~-~P~~~g~l 763 (764)
|+++|++||+|+++|.+|+.+..-....- ..+.+....+.+..++||+++ ....+|++
T Consensus 207 i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 272 (437)
T 3g0t_A 207 IGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVL 272 (437)
T ss_dssp HHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEE
T ss_pred HHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEE
Confidence 89999999999999999986433210000 111222234688889999987 33446654
No 106
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.38 E-value=3.1e-12 Score=141.26 Aligned_cols=153 Identities=14% Similarity=0.044 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
.-.++.+.+++++|.+ ..++|+|||+||..++.+.. . ++..|+++..+|.
T Consensus 67 ~~~~l~~~la~~~g~~-----------~~~~~~sGt~A~~~al~~~~----~---------------~gd~Vi~~~~~y~ 116 (392)
T 3qhx_A 67 TRTALEAALAAVEDAA-----------FGRAFSSGMAAADCALRAML----R---------------PGDHVVIPDDAYG 116 (392)
T ss_dssp HHHHHHHHHHHHTTCS-----------EEEEESSHHHHHHHHHHHHC----C---------------TTCEEEEETTCCH
T ss_pred HHHHHHHHHHHHhCCC-----------cEEEECCHHHHHHHHHHHHh----C---------------CCCEEEEeCCCcc
Confidence 3445566788888764 36899999999988887541 1 1225788899998
Q ss_pred hHHHHH----HhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEE
Q psy13453 643 SVEKSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLH 718 (764)
Q Consensus 643 Sv~kAa----~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLH 718 (764)
+....+ ...|+.++.+|.+ |+++|+++|+++ +.+|++...++.+|.+.|+++|+++|++||+|+|
T Consensus 117 ~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li 185 (392)
T 3qhx_A 117 GTFRLIDKVFTGWNVEYTPVALA-----DLDAVRAAIRPT------TRLIWVETPTNPLLSIADIAGIAQLGADSSAKVL 185 (392)
T ss_dssp HHHHHHHHTGGGGTCEEEEECTT-----CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEE
T ss_pred hHHHHHHHHHHhcCcEEEEeCCC-----CHHHHHHhhCCC------CeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEE
Confidence 877665 4568888888875 899999998653 4588888899999999999999999999999999
Q ss_pred EeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC--ceee
Q psy13453 719 VDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD--CSAM 763 (764)
Q Consensus 719 VDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~--~g~l 763 (764)
+|.+|+.+....+. . . .+|.++.++||+++.+.+ +|++
T Consensus 186 ~D~~~~~~~~~~~~-~---~---~~di~~~S~sK~lg~~g~~~~G~v 225 (392)
T 3qhx_A 186 VDNTFASPALQQPL-S---L---GADVVLHSTTKYIGGHSDVVGGAL 225 (392)
T ss_dssp EECTTTCTTTCCGG-G---G---TCSEEEEETTTTTTCSSCCCCEEE
T ss_pred EECCCcccccCChH-H---h---CCcEEEEcCccccCCCCCceEEEE
Confidence 99999865433221 1 1 359999999999987643 6655
No 107
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.37 E-value=4e-12 Score=140.90 Aligned_cols=172 Identities=10% Similarity=0.031 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
.++++++.+|+++.+|++.+ ....+||+|+++||..++.+++. +...|++...+
T Consensus 99 ~~l~~~l~~~l~~~~g~~~~-------~~~v~~~~g~~ea~~~a~~~~~~-------------------~gd~Vi~~~~~ 152 (421)
T 3l8a_A 99 DDLYQAVIDWERKEHDYAVV-------KEDILFIDGVVPAISIALQAFSE-------------------KGDAVLINSPV 152 (421)
T ss_dssp HHHHHHHHHHHHHHHCCCCC-------GGGEEEESCHHHHHHHHHHHHSC-------------------TEEEEEEEESC
T ss_pred HHHHHHHHHHHHHHhCCCCC-------HHHEEEcCCHHHHHHHHHHHhcC-------------------CCCEEEECCCC
Confidence 78999999999999996432 14689999999999998876521 12357788899
Q ss_pred chhHHHHHHhCCCceEEEecC-C--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHHHHHHHhcC
Q psy13453 641 NSSVEKSAIIGDVPVRQLRSD-D--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEELGPICQEYN 714 (764)
Q Consensus 641 H~Sv~kAa~~lGl~v~~Vp~d-~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eIa~i~~~~g 714 (764)
|.++..++...|.+++.+|.+ . ++.+|+++|+++|++. .+.+|+.+..++.+|.+ +++++|+++|++||
T Consensus 153 y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~-----~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~ 227 (421)
T 3l8a_A 153 YYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDN-----NVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHG 227 (421)
T ss_dssp CHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHT-----TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhcc-----CCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcC
Confidence 999999999999999999975 3 3479999999999742 24477778889999999 89999999999999
Q ss_pred CEEEEeccccccccccchhhhhh---cCCCcccEEEEcCCccCCC-CcCceee
Q psy13453 715 IWLHVDAAYAGSALLLPEYAHLK---RGLEYVDSFDFNTHKWLLV-NFDCSAM 763 (764)
Q Consensus 715 lwLHVDaA~Gg~~l~~~~~r~~l---~gie~aDSit~d~HK~l~~-P~~~g~l 763 (764)
++|++|.+|+++..-...+.... ......+-+..+++|+++. .+.+|++
T Consensus 228 ~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~ 280 (421)
T 3l8a_A 228 VILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFA 280 (421)
T ss_dssp CEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEE
T ss_pred CEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeE
Confidence 99999999987543211111110 1111235778899999973 3555654
No 108
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.37 E-value=2.7e-12 Score=139.17 Aligned_cols=191 Identities=10% Similarity=0.034 Sum_probs=132.4
Q ss_pred HHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhc
Q psy13453 538 IVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQ 617 (764)
Q Consensus 538 ~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~ 617 (764)
.+.+.+...+......|... ..++++++.+++++.+|.+.+ ....+||+|||+++..++.+...
T Consensus 41 ~v~~a~~~~~~~~~~~y~~~--~~~~~~~l~~~l~~~~g~~~~-------~~~v~~~~g~~~a~~~~~~~l~~------- 104 (383)
T 3kax_A 41 PIQTALKKRIEHPIFGYTLP--PENIGDIICNWTKKQYNWDIQ-------KEWIVFSAGIVPALSTSIQAFTK------- 104 (383)
T ss_dssp HHHHHHHHHHHSCCCCCCCC--CTTHHHHHHHHHHHHHCCCCC-------GGGEEEESCHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHHHHHHhCCCCC-------hhhEEEcCCHHHHHHHHHHHhCC-------
Confidence 33444444444333333322 567889999999999995321 13689999999999888765411
Q ss_pred cCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCC---CCcccHHHHHHHHHHhhhcCCCceEEEEeecc
Q psy13453 618 SKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD---NGVLRGDALLTAVKEDLAKGLIPCCLIATLGT 694 (764)
Q Consensus 618 ~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~---~g~md~~~Le~~I~~~~~~G~~p~~VvataGT 694 (764)
+...|++...+|.+...++...|.+++.+|.+. ++.+|+++|+++|.++ +-+|+.+..+
T Consensus 105 ------------~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~ 166 (383)
T 3kax_A 105 ------------ENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQG------VKLMLLCSPH 166 (383)
T ss_dssp ------------TTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTT------CCEEEEESSB
T ss_pred ------------CCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcC------CeEEEEeCCC
Confidence 122578899999999999999999999999863 3469999999999332 4467778889
Q ss_pred CCcccccc---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCC----CcccEEEEcCCccCC-CCcCceee
Q psy13453 695 TGTCAFDN---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGL----EYVDSFDFNTHKWLL-VNFDCSAM 763 (764)
Q Consensus 695 T~~GaiDp---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gi----e~aDSit~d~HK~l~-~P~~~g~l 763 (764)
+.+|.+-| +.+|+++|++||+|+++|.+|+.+..-...... +..+ ...+-+..++||+++ ....+|.+
T Consensus 167 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 242 (383)
T 3kax_A 167 NPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTP-FASLSEELAARTITCMAPSKTFNIAGLQASII 242 (383)
T ss_dssp TTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHTTEEEEECSHHHHTCGGGCCEEE
T ss_pred CCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCcee-HhhcCccccCcEEEEEEChhhccCcchhheEE
Confidence 99999854 666777799999999999999875432111111 1111 122477889999987 33455554
No 109
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.36 E-value=1.2e-11 Score=134.52 Aligned_cols=160 Identities=14% Similarity=0.038 Sum_probs=118.8
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+.+++++|.+. .+++++||+++..++.+.. . ++..|+++...|
T Consensus 84 ~~~~~l~~~la~~~g~~~-----------~i~~~sGt~a~~~~~~~~~----~---------------~gd~v~~~~~~~ 133 (384)
T 1bs0_A 84 VVHQALEEELAEWLGYSR-----------ALLFISGFAANQAVIAAMM----A---------------KEDRIAADRLSH 133 (384)
T ss_dssp HHHHHHHHHHHHHHTCSE-----------EEEESCHHHHHHHHHHHHC----C---------------TTCEEEEETTCC
T ss_pred HHHHHHHHHHHHHhCCCc-----------EEEeCCcHHHHHHHHHHhC----C---------------CCcEEEEccccc
Confidence 455667778888888753 5777888999988776431 1 122578889999
Q ss_pred hhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEec
Q psy13453 642 SSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDA 721 (764)
Q Consensus 642 ~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDa 721 (764)
.+...+++..|.+++.+|. +|+++|+++|++... .+.+|+....++.+|.+.|+++|+++|++||+|+++|.
T Consensus 134 ~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~---~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De 205 (384)
T 1bs0_A 134 ASLLEAASLSPSQLRRFAH-----NDVTHLARLLASPCP---GQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDD 205 (384)
T ss_dssp HHHHHHHHTSSSEEEEECT-----TCHHHHHHHHHSCCS---SCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHcCCCEEEeCC-----CCHHHHHHHHHhcCC---CCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEEC
Confidence 9999999999999988884 579999999875321 24577777788899999999999999999999999999
Q ss_pred cccccccc-cch-hhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 722 AYAGSALL-LPE-YAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 722 A~Gg~~l~-~~~-~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+|+.+... ... ....+ + ...|.++.++||+++ |.+ |++
T Consensus 206 ~~~~~~~~~~~~~~~~~~-~-~~~di~~~s~sK~~~-~~G-G~~ 245 (384)
T 1bs0_A 206 AHGTGVIGEQGRGSCWLQ-K-VKPELLVVTFGKGFG-VSG-AAV 245 (384)
T ss_dssp TTTTTTSSGGGCCHHHHT-T-CCCSEEEEESSSTTS-SCC-EEE
T ss_pred CcccceecCCCCchHHhc-C-CCCcEEEeeccchhh-ccC-cEE
Confidence 99754421 101 11111 2 246999999999998 555 654
No 110
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.36 E-value=3.9e-12 Score=140.17 Aligned_cols=153 Identities=15% Similarity=0.101 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
...++.+++++++|.+ ..+++++||+|+..++.+.. . ++..|+++..+|.
T Consensus 60 ~~~~l~~~la~~~g~~-----------~~i~~~sG~~ai~~~~~~~~----~---------------~gd~vl~~~~~y~ 109 (389)
T 3acz_A 60 TVEQFEEMVCSIEGAA-----------GSAAFGSGMGAISSSTLAFL----Q---------------KGDHLIAGDTLYG 109 (389)
T ss_dssp HHHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHTTTC----C---------------TTCEEEEESSCCH
T ss_pred HHHHHHHHHHHHhCCC-----------eEEEeCCHHHHHHHHHHHHh----C---------------CCCEEEEeCCCch
Confidence 3445556788888865 25788889999888776431 0 1225778888998
Q ss_pred hHHHH----HHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEE
Q psy13453 643 SVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLH 718 (764)
Q Consensus 643 Sv~kA----a~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLH 718 (764)
+...+ +...|++++.+|. .|+++|+++|+++ +-+|+++..++.+|.+.|+++|+++|++||+|++
T Consensus 110 ~~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li 178 (389)
T 3acz_A 110 CTVSLFTHWLPRFGIEVDLIDT-----SDVEKVKAAWKPN------TKMVYLESPANPTCKVSDIKGIAVVCHERGARLV 178 (389)
T ss_dssp HHHHHHHHHHHHTTCEEEEECT-----TCHHHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHcCCEEEEECC-----CCHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEE
Confidence 87666 5678999999887 3799999888653 4488888999999999999999999999999999
Q ss_pred EeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC--ceee
Q psy13453 719 VDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD--CSAM 763 (764)
Q Consensus 719 VDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~--~g~l 763 (764)
||.+|+.+....+ .. . .+|.++.++||+++.|.+ +|++
T Consensus 179 vD~~~~~~~~~~~-~~-----~-~~di~~~S~sK~~~~~~~~~~G~v 218 (389)
T 3acz_A 179 VDATFTSPCFLKP-LE-----L-GADIALHSVSKYINGHGDVIGGVS 218 (389)
T ss_dssp EECTTTCTTTCCG-GG-----T-TCSEEEEETTTTTTCSSCCCCEEE
T ss_pred EECCCccccccCc-cc-----c-CCeEEEECChhhccCCCCceeEEE
Confidence 9999987654222 11 1 469999999999999987 6765
No 111
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.36 E-value=1.7e-11 Score=131.70 Aligned_cols=169 Identities=14% Similarity=0.007 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
...++.+++++++|.+++ ..++|+|||+++..++.+.. . ++..|+++..+|.
T Consensus 52 ~~~~l~~~la~~~~~~~~---------~i~~~~g~~~a~~~~~~~l~----~---------------~gd~vl~~~~~~~ 103 (354)
T 3ly1_A 52 EILMLGNKLAAHHQVEAP---------SILLTAGSSEGIRAAIEAYA----S---------------LEAQLVIPELTYG 103 (354)
T ss_dssp HHHHHHHHHHHHTTSCGG---------GEEEESHHHHHHHHHHHHHC----C---------------TTCEEEEESSSCT
T ss_pred chHHHHHHHHHHhCCChH---------HEEEeCChHHHHHHHHHHHh----C---------------CCCeEEECCCCch
Confidence 345678899999987653 68999999999988876541 1 1124778889999
Q ss_pred hHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh--cCCEEEEe
Q psy13453 643 SVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE--YNIWLHVD 720 (764)
Q Consensus 643 Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~--~glwLHVD 720 (764)
++..++...|.+++.+|.++++.+|+++|+++|++. ..+-+|+.+..++.+|.+-|++++.++|+. ||+++++|
T Consensus 104 ~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~D 179 (354)
T 3ly1_A 104 DGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAY----SGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVD 179 (354)
T ss_dssp HHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTC----SSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEE
T ss_pred HHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccC----CCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEe
Confidence 999999999999999999988999999999999731 125577778899999999998888888877 99999999
Q ss_pred ccccccccccc--hhhhhhcCCCcccEEEEcCCccCC-CCcCceee
Q psy13453 721 AAYAGSALLLP--EYAHLKRGLEYVDSFDFNTHKWLL-VNFDCSAM 763 (764)
Q Consensus 721 aA~Gg~~l~~~--~~r~~l~gie~aDSit~d~HK~l~-~P~~~g~l 763 (764)
.+|+.+..-.. .....+......+-+..++||+++ ....+|++
T Consensus 180 e~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~ 225 (354)
T 3ly1_A 180 EAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYA 225 (354)
T ss_dssp CTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEE
T ss_pred ccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheee
Confidence 99997543211 111112211123577889999997 44556654
No 112
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.36 E-value=6.8e-12 Score=139.87 Aligned_cols=150 Identities=15% Similarity=0.121 Sum_probs=114.0
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
.++.+.+++++|.+. .+++++||+||..++.+.. . ++..|+++..+|.+.
T Consensus 61 ~~l~~~la~~~g~~~-----------~v~~~sGt~A~~~~l~~~~----~---------------~gd~vi~~~~~~~~~ 110 (421)
T 2ctz_A 61 DVLEKRLAALEGGKA-----------ALATASGHAAQFLALTTLA----Q---------------AGDNIVSTPNLYGGT 110 (421)
T ss_dssp HHHHHHHHHHHTCSE-----------EEEESSHHHHHHHHHHHHC----C---------------TTCEEEECSCCCHHH
T ss_pred HHHHHHHHHHhCCCc-----------eEEecCHHHHHHHHHHHHh----C---------------CCCEEEEeCCCchHH
Confidence 344556777777643 4677778999988887541 1 123588899999998
Q ss_pred HHHH----HhCCCceEEE-ecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEE
Q psy13453 645 EKSA----IIGDVPVRQL-RSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHV 719 (764)
Q Consensus 645 ~kAa----~~lGl~v~~V-p~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHV 719 (764)
..++ ...|++++.+ +.+ |+++|+++|++. +.+|+++..++.+|.+.|+++|+++|++||+|+|+
T Consensus 111 ~~~~~~~~~~~g~~~~~~~~~~-----d~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~liv 179 (421)
T 2ctz_A 111 FNQFKVTLKRLGIEVRFTSREE-----RPEEFLALTDEK------TRAWWVESIGNPALNIPDLEALAQAAREKGVALIV 179 (421)
T ss_dssp HHHHHTHHHHTTCEEEECCTTC-----CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHcCCEEEEECCCC-----CHHHHHHhhccC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEE
Confidence 8775 6789999888 664 799999988653 45788899999999999999999999999999999
Q ss_pred eccc-cccccccchhhhhhcCCCcccEEEEcCCccCCCCcC-cee
Q psy13453 720 DAAY-AGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD-CSA 762 (764)
Q Consensus 720 DaA~-Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~-~g~ 762 (764)
|++| +.+.. ... . +. .+|.++.++||+++.|.+ .|.
T Consensus 180 D~~~~~~g~~-~~~---~--~~-~~Di~~~s~~K~l~~~g~~~G~ 217 (421)
T 2ctz_A 180 DNTFGMGGYL-LRP---L--AW-GAALVTHSLTKWVGGHGAVIAG 217 (421)
T ss_dssp ECGGGGGGTS-CCG---G--GG-TCSEEEEETTTTTTCSSCCCCE
T ss_pred ECCccccccc-CCc---c--cc-CCeEEEECCcccccCCCCcEEE
Confidence 9999 65532 111 1 11 369999999999998764 443
No 113
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.35 E-value=4.7e-12 Score=136.43 Aligned_cols=195 Identities=13% Similarity=0.115 Sum_probs=128.0
Q ss_pred CccccccCCCCChHHHHHHHHHHhh-cccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHH
Q psy13453 523 PQFNAYFPTGSSYPSIVGDMLSGAF-GLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEAT 601 (764)
Q Consensus 523 P~~~~~~~~~~~~~~~lad~l~~~l-N~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeAN 601 (764)
-.|++.-.. +....++.+++.... ......|...|...++| +++++++|.+. .++++|||+++
T Consensus 12 ~~~l~~~~~-p~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~----~~la~~~~~~~-----------~i~~~~G~~a~ 75 (357)
T 3lws_A 12 TTGQISGHG-KRNVGVLKTAFAAVADEMASDQYGTGAIIEPFE----QKFADVLGMDD-----------AVFFPSGTMAQ 75 (357)
T ss_dssp CSEESSBSS-CCBHHHHHHHHTTSCTTCBCEETTEETTHHHHH----HHHHHHHTCSE-----------EEEESCHHHHH
T ss_pred hcccccCCC-CCCHHHHHHHHHHhhcccCcccccCChHHHHHH----HHHHHHhCCCc-----------EEEecCcHHHH
Confidence 345554433 334455555544321 11123344445555555 57788888743 57889999999
Q ss_pred HHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHH---HHHhCCCceEEEecCCCCcccHHHHHHHHHHh
Q psy13453 602 LVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEK---SAIIGDVPVRQLRSDDNGVLRGDALLTAVKED 678 (764)
Q Consensus 602 l~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~k---Aa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~ 678 (764)
..++.+....- .+.+|+++...|++..+ .+...|+.++.||. +++.+|+++|+++. +
T Consensus 76 ~~al~~~~~~g-----------------d~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~d~~~l~~~~--~ 135 (357)
T 3lws_A 76 QVALRIWSDET-----------------DNRTVAYHPLCHLEIHEQDGLKELHPIETILVGA-ADRLMTLDEIKALP--D 135 (357)
T ss_dssp HHHHHHHHHHH-----------------TCCEEEECTTCHHHHSSTTHHHHHSSCEEEECSC-TTSCCCHHHHHTCC--S
T ss_pred HHHHHHHhhcC-----------------CCcEEEecccceeeeeccchhhhccCcEEEEecC-CCCCcCHHHHhcCc--C
Confidence 98887665431 01257788899988765 34567888888885 56889999998872 1
Q ss_pred hhcCCCceEEEEeeccCCc-cccc---cHHHHHHHHHhcCCEEEEecccccccc--ccchhhhhhcCCCcccEEEEcCCc
Q psy13453 679 LAKGLIPCCLIATLGTTGT-CAFD---NLEELGPICQEYNIWLHVDAAYAGSAL--LLPEYAHLKRGLEYVDSFDFNTHK 752 (764)
Q Consensus 679 ~~~G~~p~~VvataGTT~~-GaiD---pl~eIa~i~~~~glwLHVDaA~Gg~~l--~~~~~r~~l~gie~aDSit~d~HK 752 (764)
+-+|+++..++.+ |.+- ++++|+++|++||+|+|+|+||+.... ......... +.+|.++.++||
T Consensus 136 ------~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK 206 (357)
T 3lws_A 136 ------IACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA---GLFDSIYISFYK 206 (357)
T ss_dssp ------CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH---TTSSEEEEESSS
T ss_pred ------cceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH---hcCCEEEEeccc
Confidence 3366666666665 7765 599999999999999999999862211 111122222 346999999999
Q ss_pred cCCCCcCceee
Q psy13453 753 WLLVNFDCSAM 763 (764)
Q Consensus 753 ~l~~P~~~g~l 763 (764)
+++.|.+ |++
T Consensus 207 ~~~~~~g-g~~ 216 (357)
T 3lws_A 207 GLGGIAG-AIL 216 (357)
T ss_dssp TTCCSSC-EEE
T ss_pred cCCCCce-EEE
Confidence 9988887 654
No 114
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.35 E-value=7.3e-12 Score=135.46 Aligned_cols=164 Identities=14% Similarity=0.037 Sum_probs=121.6
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
.++.+++++++|.++. ...+||+|||+++..++.+.. . +...|+++..+|.++
T Consensus 70 ~~l~~~la~~~g~~~~--------~~i~~~~g~t~a~~~~~~~~~----~---------------~gd~Vl~~~~~~~~~ 122 (367)
T 3euc_A 70 EALRAKLKEVMQVPAG--------MEVLLGNGSDEIISMLALAAA----R---------------PGAKVMAPVPGFVMY 122 (367)
T ss_dssp HHHHHHHHHHHTCCTT--------CEEEEEEHHHHHHHHHHHHTC----C---------------TTCEEEEEESCSCCS
T ss_pred HHHHHHHHHHhCCCCc--------ceEEEcCCHHHHHHHHHHHHc----C---------------CCCEEEEcCCCHHHH
Confidence 4566678888888321 368999999999888776431 1 122477888899999
Q ss_pred HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHHHHHHHhc--CCEEEE
Q psy13453 645 EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEELGPICQEY--NIWLHV 719 (764)
Q Consensus 645 ~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eIa~i~~~~--glwLHV 719 (764)
..++...|.+++.+|.++++.+|+++|+++|++. .+-+|+.+..++.+|.+ +++++|+++|++| |+++|+
T Consensus 123 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~ 197 (367)
T 3euc_A 123 AMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEH-----QPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVV 197 (367)
T ss_dssp CHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEE
T ss_pred HHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhcc-----CCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEE
Confidence 9999999999999999999999999999999873 13477778889999998 6788899999999 999999
Q ss_pred eccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 720 DAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 720 DaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
|.+|+.+.. ......+.. ...+-+..++||++.....+|++
T Consensus 198 De~~~~~~~--~~~~~~~~~-~~~~i~~~s~sK~~~~G~r~G~~ 238 (367)
T 3euc_A 198 DEAYQPFAQ--ESWMSRLTD-FGNLLVMRTVSKLGLAGIRLGYV 238 (367)
T ss_dssp ECTTCCSSS--CCSGGGGGT-CTTEEEEEECCCTTSCSCCEEEE
T ss_pred eCcchhhcc--cchHHHHhh-CCCEEEEecchhhcccccCceee
Confidence 999987431 111112211 12356778999994444556654
No 115
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.35 E-value=5.3e-12 Score=140.41 Aligned_cols=185 Identities=14% Similarity=0.099 Sum_probs=133.0
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEE
Q psy13453 555 LSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVA 634 (764)
Q Consensus 555 ~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi 634 (764)
.......++++.+.+|+.+..|..-. ......+||+|||++|..++.+.+. +...|
T Consensus 83 ~~~~g~~~l~~~la~~~~~~~~~~~~-----~~~~~v~~~~gg~~a~~~~~~~l~~-------------------~gd~v 138 (435)
T 3piu_A 83 QDYHGLPAFKKAMVDFMAEIRGNKVT-----FDPNHLVLTAGATSANETFIFCLAD-------------------PGEAV 138 (435)
T ss_dssp CCTTCCHHHHHHHHHHHHHHTTTSSC-----CCGGGEEEEEHHHHHHHHHHHHHCC-------------------TTCEE
T ss_pred CCCCCcHHHHHHHHHHHHHhhCCCCC-----CCHHHEEEcCChHHHHHHHHHHhcC-------------------CCCeE
Confidence 33444578999999999887763211 0124689999999999888875421 11257
Q ss_pred EecCCcchhHHHHHH-hCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHHHH
Q psy13453 635 YTSDQSNSSVEKSAI-IGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEELGP 708 (764)
Q Consensus 635 ~~S~~aH~Sv~kAa~-~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eIa~ 708 (764)
++.+.+|.+...++. ..|.+++.+|.++ ++.+|+++|+++|++..+++..+.+|+.+..++.+|.+ +++++|++
T Consensus 139 l~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~ 218 (435)
T 3piu_A 139 LIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLS 218 (435)
T ss_dssp EEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred EECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHH
Confidence 788889999998887 6899999999875 45699999999998876666667788888889999988 56788999
Q ss_pred HHHhcCCEEEEeccccccccccch---hhhhhc--CC------CcccEEEEcCCccCCCC-cCceee
Q psy13453 709 ICQEYNIWLHVDAAYAGSALLLPE---YAHLKR--GL------EYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 709 i~~~~glwLHVDaA~Gg~~l~~~~---~r~~l~--gi------e~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+|++||+|+++|.+|+++.+-... ...... ++ ..-.-+..++||.++.| +.+|++
T Consensus 219 ~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~ 285 (435)
T 3piu_A 219 FVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAI 285 (435)
T ss_dssp HHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEE
T ss_pred HHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEE
Confidence 999999999999999875432211 111111 11 11126688999999743 455654
No 116
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.35 E-value=4.2e-12 Score=140.65 Aligned_cols=193 Identities=12% Similarity=0.022 Sum_probs=137.9
Q ss_pred HHHHHHHhhcc---cCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCC-cEEEeCChHHHHHHHHHHHHHHHhh
Q psy13453 539 VGDMLSGAFGL---IGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPG-GGIIQSTASEATLVSILVAKRKMIN 614 (764)
Q Consensus 539 lad~l~~~lN~---n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~-~GvfTsGgTeANl~Al~aAR~~~~~ 614 (764)
+.+.+...++. ....|.......++++.+.+|+.+.+|.+.+ .. ..+||+|||+++..++.+...
T Consensus 55 v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~-------~~~~v~~~~g~~~a~~~~~~~~~~---- 123 (429)
T 1yiz_A 55 ALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTIN-------PMTEVLVTVGAYEALYATIQGHVD---- 123 (429)
T ss_dssp HHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCC-------TTTSEEEESHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCC-------CcCCEEEecChHHHHHHHHHHhcC----
Confidence 34444544443 2233444445678999999999998886432 13 589999999999888876421
Q ss_pred hhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCC----------CCcccHHHHHHHHHHhhhcCCC
Q psy13453 615 HWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD----------NGVLRGDALLTAVKEDLAKGLI 684 (764)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~----------~g~md~~~Le~~I~~~~~~G~~ 684 (764)
++..|++..-+|.+...++...|.+++.+|.+. ++.+|+++|+++|++.
T Consensus 124 ---------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------ 182 (429)
T 1yiz_A 124 ---------------EGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEK------ 182 (429)
T ss_dssp ---------------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTT------
T ss_pred ---------------CCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccC------
Confidence 112477788889999999999999999999875 4689999999988532
Q ss_pred ceEEEEeeccCCccccc---cHHHHHHHHHhcCCEEEEeccccccccccchhhh--hhcCCCcccEEEEcCCccCCCC-c
Q psy13453 685 PCCLIATLGTTGTCAFD---NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFDFNTHKWLLVN-F 758 (764)
Q Consensus 685 p~~VvataGTT~~GaiD---pl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~--~l~gie~aDSit~d~HK~l~~P-~ 758 (764)
+-+|+.+..++.+|.+- ++++|+++|++||+|+++|.+|+++..-...+.. .+.+....|.+..++||+++.| +
T Consensus 183 ~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~ 262 (429)
T 1yiz_A 183 TKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGW 262 (429)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGG
T ss_pred ceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCc
Confidence 44677778889999986 5999999999999999999999875432111111 1112234689999999988733 2
Q ss_pred Cceee
Q psy13453 759 DCSAM 763 (764)
Q Consensus 759 ~~g~l 763 (764)
.+|++
T Consensus 263 r~G~~ 267 (429)
T 1yiz_A 263 KIGWA 267 (429)
T ss_dssp CCEEE
T ss_pred ceEEE
Confidence 26665
No 117
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.34 E-value=7.2e-12 Score=137.09 Aligned_cols=192 Identities=8% Similarity=-0.065 Sum_probs=134.2
Q ss_pred HHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhc
Q psy13453 538 IVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQ 617 (764)
Q Consensus 538 ~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~ 617 (764)
.+.+.+...+......|... ..++++.+.+|+.+.+|++.+ ....++|+|||+++..++.+.. .
T Consensus 48 ~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~-------~~~v~~t~g~~~a~~~~~~~l~----~--- 111 (399)
T 1c7n_A 48 ELIEGLKKYLDETVLGYTGP--TEEYKKTVKKWMKDRHQWDIQ-------TDWIINTAGVVPAVFNAVREFT----K--- 111 (399)
T ss_dssp HHHHHHHHHHHHCCCSSBCC--CHHHHHHHHHHHHHHHCCCCC-------GGGEEEESSHHHHHHHHHHHHC----C---
T ss_pred HHHHHHHHHHhcCCCCCCCC--cHHHHHHHHHHHHHHhCCCCC-------hhhEEEcCCHHHHHHHHHHHhc----C---
Confidence 34444444443323334332 778899999999988885421 1368899999999988876542 1
Q ss_pred cCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecC-CC--CcccHHHHHHHHHHhhhcCCCceEEEEeecc
Q psy13453 618 SKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSD-DN--GVLRGDALLTAVKEDLAKGLIPCCLIATLGT 694 (764)
Q Consensus 618 ~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d-~~--g~md~~~Le~~I~~~~~~G~~p~~VvataGT 694 (764)
++..|++..-+|.+...++...|.+++.+|.+ ++ +.+|+++|+++|++. .+-+|+.+..+
T Consensus 112 ------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~-----~~~~v~~~~~~ 174 (399)
T 1c7n_A 112 ------------PGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDK-----NNKALLFCSPH 174 (399)
T ss_dssp ------------TTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCT-----TEEEEEEESSB
T ss_pred ------------CCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccC-----CCcEEEEcCCC
Confidence 11257788889999999999999999999986 43 369999999998631 24466678889
Q ss_pred CCcccccc---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCC----CcccEEEEcCCccCCCC-cCceee
Q psy13453 695 TGTCAFDN---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGL----EYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 695 T~~GaiDp---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gi----e~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+.+|.+-| +++|+++|++||+|+++|.+|+++..-..... .+..+ ...+-+..++||+++.| +.+|++
T Consensus 175 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 250 (399)
T 1c7n_A 175 NPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHT-VFQSIDEQLADKTITFTAPSKTFNIAGMGMSNI 250 (399)
T ss_dssp TTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCC-CGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEE
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcc-cHHHcCccccCcEEEEEeChhhccccchheEEE
Confidence 99999977 99999999999999999999997543211110 11111 12246778999998744 335654
No 118
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.34 E-value=4.6e-12 Score=135.79 Aligned_cols=168 Identities=18% Similarity=0.182 Sum_probs=115.7
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 554 WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
|...+...+++ +++++++|.+. .++|+|||++|..++.+.. . ++..
T Consensus 34 y~~~~~~~~l~----~~la~~~g~~~-----------~~~~~~gt~a~~~~~~~~~----~---------------~gd~ 79 (347)
T 1jg8_A 34 YGEDPTINELE----RLAAETFGKEA-----------ALFVPSGTMGNQVSIMAHT----Q---------------RGDE 79 (347)
T ss_dssp GTCCHHHHHHH----HHHHHHHTCSE-----------EEEESCHHHHHHHHHHHHC----C---------------TTCE
T ss_pred cCCChHHHHHH----HHHHHHhCCce-----------EEEecCcHHHHHHHHHHhc----C---------------CCCE
Confidence 44455544444 57777777643 5899999999987765431 1 1225
Q ss_pred EEecCCcchhHHH---HHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCc-ccc---ccHHHH
Q psy13453 634 AYTSDQSNSSVEK---SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGT-CAF---DNLEEL 706 (764)
Q Consensus 634 i~~S~~aH~Sv~k---Aa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~-Gai---Dpl~eI 706 (764)
|++++.+|.+... ++...|.+++.| .++++.+|+++|+++|++....+..+.+|+.+..++.+ |.+ +++++|
T Consensus 80 Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i 158 (347)
T 1jg8_A 80 VILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEI 158 (347)
T ss_dssp EEEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHH
T ss_pred EEEcCcchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHH
Confidence 7778899987654 566789988888 55678899999999986421111235677777788888 887 456789
Q ss_pred HHHHHhcCCEEEEeccccccccc-cc-hhhhhhcCCCcccEEEEcCCccCCCCcC
Q psy13453 707 GPICQEYNIWLHVDAAYAGSALL-LP-EYAHLKRGLEYVDSFDFNTHKWLLVNFD 759 (764)
Q Consensus 707 a~i~~~~glwLHVDaA~Gg~~l~-~~-~~r~~l~gie~aDSit~d~HK~l~~P~~ 759 (764)
+++|++||+++|+|+||.-+... .+ ....... .+|++++++||+++.|.|
T Consensus 159 ~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~---~~d~~~~s~sK~l~~~~G 210 (347)
T 1jg8_A 159 CTIAKEHGINVHIDGARIFNASIASGVPVKEYAG---YADSVMFCLSKGLCAPVG 210 (347)
T ss_dssp HHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHH---TCSEEEEESSSTTCCSSC
T ss_pred HHHHHHCCCEEEeehhhhhcchhhcCCChHHhcc---cccEEEEecccccCCCce
Confidence 99999999999999986432111 11 1122222 359999999999998865
No 119
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.34 E-value=1.5e-11 Score=133.32 Aligned_cols=185 Identities=9% Similarity=-0.053 Sum_probs=134.2
Q ss_pred HHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhcc
Q psy13453 539 VGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQS 618 (764)
Q Consensus 539 lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~ 618 (764)
+.+.+...+......|...+...++++.+.+|+.+..|++.+ ....++|+|||+++..++.+.. .
T Consensus 47 v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~-------~~~v~~~~g~~~a~~~~~~~~~----~---- 111 (370)
T 2z61_A 47 IVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADII-------PDNIIITGGSSLGLFFALSSII----D---- 111 (370)
T ss_dssp HHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCC-------GGGEEEESSHHHHHHHHHHHHC----C----
T ss_pred HHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCC-------hhhEEECCChHHHHHHHHHHhc----C----
Confidence 344444444332334444455788999999999998886432 1368999999999988887642 1
Q ss_pred CCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcc
Q psy13453 619 KNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTC 698 (764)
Q Consensus 619 ~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~G 698 (764)
++..|++++.+|.+...++...|.+++.+| +|+++|++++++. +-+|+.+..++.+|
T Consensus 112 -----------~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~------~d~~~l~~~l~~~------~~~v~~~~p~nptG 168 (370)
T 2z61_A 112 -----------DGDEVLIQNPCYPCYKNFIRFLGAKPVFCD------FTVESLEEALSDK------TKAIIINSPSNPLG 168 (370)
T ss_dssp -----------TTCEEEEESSCCTHHHHHHHHTTCEEEEEC------SSHHHHHHHCCSS------EEEEEEESSCTTTC
T ss_pred -----------CCCEEEEeCCCchhHHHHHHHcCCEEEEeC------CCHHHHHHhcccC------ceEEEEcCCCCCcC
Confidence 112578888999999999999999988887 7899999988542 44677788889999
Q ss_pred ccccHHHHHHHHHhcCCEEEEeccccccccccc--hhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 699 AFDNLEELGPICQEYNIWLHVDAAYAGSALLLP--EYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 699 aiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~--~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
.+-|++ |+++|++||+++++|.+|+.+..-.+ ... .+.+....|.+..++||+++.| +.+|++
T Consensus 169 ~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 234 (370)
T 2z61_A 169 EVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAI-EFDENLEKTILINGFSKLYAMTGWRIGYV 234 (370)
T ss_dssp CCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGG-GTCTTCSSEEEEEESTTTTTCGGGCCEEE
T ss_pred cccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHH-HccCCCCcEEEEecChhccCCccceEEEE
Confidence 999999 99999999999999999997543211 111 1122335688999999999744 225654
No 120
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.34 E-value=1.7e-11 Score=135.92 Aligned_cols=198 Identities=9% Similarity=-0.011 Sum_probs=136.5
Q ss_pred HHHHHHHHHhhccc---CccccCCchHHHHHHHHHHHHHHHcCCC-ccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHH
Q psy13453 537 SIVGDMLSGAFGLI---GFSWLSSPACTELEVLVMNWLGKALGLP-EEFLNCSPGPGGGIIQSTASEATLVSILVAKRKM 612 (764)
Q Consensus 537 ~~lad~l~~~lN~n---~~~~~~sp~~t~lE~~v~~~la~llG~p-~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~ 612 (764)
..+.+.+...+..+ ...|...+...++++.+.+|+.+.+|++ .+ ....+||+|||+++..++.+..
T Consensus 61 ~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~-------~~~v~~t~G~~~al~~~~~~l~--- 130 (425)
T 1vp4_A 61 KELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLD-------EDNLIFTVGSQQALDLIGKLFL--- 130 (425)
T ss_dssp HHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCC-------GGGEEEEEHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCC-------cccEEEeccHHHHHHHHHHHhC---
Confidence 34445555544332 2345444567889999999998887854 21 1368999999999887776431
Q ss_pred hhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhc--CCCceEE-E
Q psy13453 613 INHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAK--GLIPCCL-I 689 (764)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~--G~~p~~V-v 689 (764)
. ++..|++..-+|.+...++...|.+++.+|.++++ +|+++|+++|++..++ +..+-+| +
T Consensus 131 -~---------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~v~~ 193 (425)
T 1vp4_A 131 -D---------------DESYCVLDDPAYLGAINAFRQYLANFVVVPLEDDG-MDLNVLERKLSEFDKNGKIKQVKFIYV 193 (425)
T ss_dssp -C---------------TTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCGGGEEEEEE
T ss_pred -C---------------CCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCCC-CCHHHHHHHHHhhhhcccCCCceEEEE
Confidence 1 11247778889999999999999999999998766 9999999999863221 1234455 5
Q ss_pred EeeccCCccccc---cHHHHHHHHHhcCCEEEEeccccccccccc---hhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 690 ATLGTTGTCAFD---NLEELGPICQEYNIWLHVDAAYAGSALLLP---EYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 690 ataGTT~~GaiD---pl~eIa~i~~~~glwLHVDaA~Gg~~l~~~---~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
.+..++.+|.+- ++++|+++|++||+|+++|.+|+.+..-.. .... +. ....+-+..++||+++.-+.+|++
T Consensus 194 ~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~-~~~~~i~~~s~sK~~~~G~r~G~~ 271 (425)
T 1vp4_A 194 VSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFK-IG-GPERVVLLNTFSKVLAPGLRIGMV 271 (425)
T ss_dssp ECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHH-HH-CTTTEEEEEESTTTTCGGGCEEEE
T ss_pred CCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHH-hC-CCCCEEEEeccccccccccceEEE
Confidence 677888899885 477899999999999999999987543111 1111 11 112356788999999822335665
No 121
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.34 E-value=1.4e-11 Score=134.64 Aligned_cols=188 Identities=11% Similarity=0.003 Sum_probs=130.7
Q ss_pred HHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhcc
Q psy13453 539 VGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQS 618 (764)
Q Consensus 539 lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~ 618 (764)
+.+.+...+......|.......++.+.+.+++.+.+|++.+ ....+||+|||+++..++.+...
T Consensus 49 v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~-------~~~v~~t~g~~~al~~~~~~l~~-------- 113 (391)
T 3h14_A 49 AVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLD-------PGRVVITPGSSGGFLLAFTALFD-------- 113 (391)
T ss_dssp HHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCC-------GGGEEEESSHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCC-------HHHEEEecChHHHHHHHHHHhcC--------
Confidence 444455555443344544445678999999999999886532 24689999999999887765421
Q ss_pred CCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCC--CcccHHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 619 KNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDN--GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 619 ~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~--g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
+...|++..-+|.+...++...|.+++.+|.+.+ +.+|+++|+++ .+-+|+.+..++.
T Consensus 114 -----------~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~---------~~~~v~i~~p~np 173 (391)
T 3h14_A 114 -----------SGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL---------DLAGLMVASPANP 173 (391)
T ss_dssp -----------TTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS---------CCSEEEEESSCTT
T ss_pred -----------CCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc---------CCeEEEECCCCCC
Confidence 1125778889999999999999999999999854 47899999876 2447777888999
Q ss_pred cccccc---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCC-CCcCceee
Q psy13453 697 TCAFDN---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLL-VNFDCSAM 763 (764)
Q Consensus 697 ~GaiDp---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~-~P~~~g~l 763 (764)
+|.+-| +++|+++|++||+++++|.+|+.+..-.. .... ..+...+-+..+++|+++ ....+|++
T Consensus 174 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~-~~~~~~~i~~~s~sK~~g~~G~r~G~~ 242 (391)
T 3h14_A 174 TGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAK-AVTA-LELTDECYVINSFSKYFSMTGWRVGWM 242 (391)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC-CCCG-GGTCSSSEEEEESSSTTCCTTSCCEEE
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCC-CcCh-hhcCCCEEEEEechhccCCccceeEEE
Confidence 999876 88899999999999999999987543211 1111 112233566779999997 44556654
No 122
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.34 E-value=1.3e-12 Score=143.07 Aligned_cols=168 Identities=14% Similarity=0.107 Sum_probs=118.3
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..+....+|..+.+++++++|.+.. -+++++||+|+..++.++. . ++..|+
T Consensus 63 g~~~~~~~e~~ar~~la~~~g~~~~----------~i~~~sGt~a~~~~~~~~~----~---------------~gd~Vl 113 (407)
T 2dkj_A 63 GCEVIDRVESLAIERAKALFGAAWA----------NVQPHSGSQANMAVYMALM----E---------------PGDTLM 113 (407)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEE----------ECCCSSHHHHHHHHHHHHC----C---------------TTCEEE
T ss_pred CchHHHHHHHHHHHHHHHHhCCCcc----------eEEecchHHHHHHHHHHhc----C---------------CCCEEE
Confidence 3444557888888999999998642 3566667889888877652 1 112577
Q ss_pred ecCCcchhH---HHHHHhCCCceEEEec--C-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHH
Q psy13453 636 TSDQSNSSV---EKSAIIGDVPVRQLRS--D-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPI 709 (764)
Q Consensus 636 ~S~~aH~Sv---~kAa~~lGl~v~~Vp~--d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i 709 (764)
+++.+|.+. ..++...|..++.++. + +++.+|+++|+++|++. .+-+|+++ +...|.+.|+++|+++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~~~--~p~~~~~~~l~~i~~l 186 (407)
T 2dkj_A 114 GMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEH-----RPKVIVAG--ASAYPRFWDFKAFREI 186 (407)
T ss_dssp EECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHH-----CCSEEEEC--CSSCCSCCCHHHHHHH
T ss_pred EecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhc-----CCeEEEEe--ccccCCCCCHHHHHHH
Confidence 788888776 3455555664455555 4 37899999999999752 13355553 3334688899999999
Q ss_pred HHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 710 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 710 ~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
|++||+|+++|++|+.++...+... ..++.+|.++.++||+++.+.+ |++
T Consensus 187 ~~~~~~~li~Dea~~~g~~~~~~~~---~~~~~~di~~~s~sK~l~g~~~-G~~ 236 (407)
T 2dkj_A 187 ADEVGAYLVVDMAHFAGLVAAGLHP---NPLPYAHVVTSTTHKTLRGPRG-GLI 236 (407)
T ss_dssp HHHHTCEEEEECTTTHHHHHTTCSC---CCTTTCSEEEEESSGGGCCCSC-EEE
T ss_pred HHHcCCEEEEEccccccccccCccC---CccccccEEEEeccccCCCCCc-eEE
Confidence 9999999999999998554333211 1123479999999999987876 765
No 123
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.34 E-value=6.3e-12 Score=138.34 Aligned_cols=156 Identities=11% Similarity=-0.044 Sum_probs=116.0
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
.++.+.+++++|.+ ..+++++||+++..++.+++ .. ++..|+++..+|.+.
T Consensus 66 ~~l~~~la~~~~~~-----------~~v~~~~Gt~a~~~~l~~~~---~~---------------~gd~vl~~~~~~~~~ 116 (399)
T 2oga_A 66 EGFEAEFAAYCETD-----------HAVGVNSGMDALQLALRGLG---IG---------------PGDEVIVPSHTYIAS 116 (399)
T ss_dssp HHHHHHHHHHTTSS-----------EEEEESCHHHHHHHHHHHTT---CC---------------TTCEEEEESSSCTHH
T ss_pred HHHHHHHHHHHCCC-----------eEEEecCHHHHHHHHHHHhC---CC---------------CcCEEEECCCccHHH
Confidence 34455677777764 36899999999988876542 00 122577888899999
Q ss_pred HHHHHhCCCceEEEecCC-CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccc
Q psy13453 645 EKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAY 723 (764)
Q Consensus 645 ~kAa~~lGl~v~~Vp~d~-~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~ 723 (764)
..++...|.+++.+|+++ ++.+|+++|+++|++. +-+|+ .++.+|.+.|+++|+++|+++|+|+++|++|
T Consensus 117 ~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~li~Dea~ 187 (399)
T 2oga_A 117 WLAVSATGATPVPVEPHEDHPTLDPLLVEKAITPR------TRALL---PVHLYGHPADMDALRELADRHGLHIVEDAAQ 187 (399)
T ss_dssp HHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCTT------EEEEC---CBCGGGCCCCHHHHHHHHHHHTCEECEECTT
T ss_pred HHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCCC------CeEEE---EeCCcCCccCHHHHHHHHHHcCCEEEEECcc
Confidence 999999999999999986 5899999999998643 33444 3577999999999999999999999999999
Q ss_pred cccccccchhhhhhcCCCcccEEEEcCC--ccCCCCcCceee
Q psy13453 724 AGSALLLPEYAHLKRGLEYVDSFDFNTH--KWLLVNFDCSAM 763 (764)
Q Consensus 724 Gg~~l~~~~~r~~l~gie~aDSit~d~H--K~l~~P~~~g~l 763 (764)
+.+..... +. + + ..+|.+++++| |+++.|-.+|++
T Consensus 188 ~~g~~~~~--~~-~-~-~~~di~~~S~~~sK~~~~~G~~g~~ 224 (399)
T 2oga_A 188 AHGARYRG--RR-I-G-AGSSVAAFSFYPGKNLGCFGDGGAV 224 (399)
T ss_dssp CTTCEETT--EE-T-T-CTTCEEEEECCTTSSSCCSSCCEEE
T ss_pred cccCccCC--ee-c-c-cccCEEEEeCCCCccCCcCCceEEE
Confidence 86543321 11 1 1 12589999985 999864344543
No 124
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.34 E-value=1.2e-11 Score=136.99 Aligned_cols=180 Identities=14% Similarity=0.106 Sum_probs=130.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecC
Q psy13453 559 ACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSD 638 (764)
Q Consensus 559 ~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~ 638 (764)
...++++.+.+|+.+.+|++.. ......++|+|+|+++..++.+.+. ++..|+++.
T Consensus 84 g~~~lr~~la~~~~~~~g~~~~-----~~~~~i~~~~G~~~ai~~~~~~~~~-------------------~gd~Vl~~~ 139 (428)
T 1iay_A 84 GLPEFRKAIAKFMEKTRGGRVR-----FDPERVVMAGGATGANETIIFCLAD-------------------PGDAFLVPS 139 (428)
T ss_dssp CCHHHHHHHHHHHHHHTTTCSC-----CCTTSCEEEEHHHHHHHHHHHHHCC-------------------TTCEEEEES
T ss_pred CcHHHHHHHHHHHHHhcCCCCC-----CChhhEEEccChHHHHHHHHHHhCC-------------------CCCeEEEcc
Confidence 4678999999999998885411 0113578999999999888775421 112477788
Q ss_pred CcchhHHHHH-HhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHHHHHHHh
Q psy13453 639 QSNSSVEKSA-IIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEELGPICQE 712 (764)
Q Consensus 639 ~aH~Sv~kAa-~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eIa~i~~~ 712 (764)
-+|.+...++ ...|++++.+|.+. ++.+|+++|+++|++..+.+..+-+|+.+..++.+|.+-| +++|+++|++
T Consensus 140 p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~ 219 (428)
T 1iay_A 140 PYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQ 219 (428)
T ss_dssp SCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHT
T ss_pred CCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHH
Confidence 8898887755 46799999999873 4589999999999876555555667777888889999988 9999999999
Q ss_pred cCCEEEEeccccccccccc---hhhhhhc-----CCCccc--EEEEcCCccCCCC-cCceee
Q psy13453 713 YNIWLHVDAAYAGSALLLP---EYAHLKR-----GLEYVD--SFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 713 ~glwLHVDaA~Gg~~l~~~---~~r~~l~-----gie~aD--Sit~d~HK~l~~P-~~~g~l 763 (764)
||+|+++|.||+++..-.. ....... ++ .+| -+..++||+++.| +-+|++
T Consensus 220 ~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~viv~~s~sK~~g~~Glr~G~~ 280 (428)
T 1iay_A 220 HNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYC-NKDLVHIVYSLSKDMGLPGFRVGII 280 (428)
T ss_dssp TTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTS-CTTSEEEEEESTTTSSCGGGCEEEE
T ss_pred CCeEEEEeccccccccCCCCccCHHHhccccccccC-CCCcEEEEecchhhcCCCCceEEEE
Confidence 9999999999998533211 1111111 11 157 5789999999754 234554
No 125
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.33 E-value=2.9e-11 Score=135.08 Aligned_cols=170 Identities=12% Similarity=0.051 Sum_probs=118.0
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCce
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKL 632 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~ 632 (764)
.|..++...++++ .+++++|.+ ..+||+|||+|+..++.++. . . ++
T Consensus 70 ~y~~~~~~~~l~~----~la~~~~~~-----------~~~~~~~gt~a~~~al~~l~----~----~----------gd- 115 (456)
T 2ez2_A 70 AYAGSENFYHLER----TVQELFGFK-----------HIVPTHQGRGAENLLSQLAI----K----P----------GQ- 115 (456)
T ss_dssp CSSSCHHHHHHHH----HHHHHHCCS-----------EEEEESSHHHHHHHHHHHHC----C----T----------TC-
T ss_pred hcccChhHHHHHH----HHHHHhCCC-----------cEEEeCCcHHHHHHHHHHhC----C----C----------CC-
Confidence 3445566666655 556666653 47999999999998887651 1 0 13
Q ss_pred EEEecCCcc-hhHHHHHHhCCCceEEEecCC----------CCcccHHHHHHHHHHhhhcCCCceEEEEeeccC-Ccccc
Q psy13453 633 VAYTSDQSN-SSVEKSAIIGDVPVRQLRSDD----------NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTT-GTCAF 700 (764)
Q Consensus 633 vi~~S~~aH-~Sv~kAa~~lGl~v~~Vp~d~----------~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT-~~Gai 700 (764)
+++..+| .+...++...|..++.+++++ ++.+|+++|+++|++... ..+.+|+.+..++ .+|.+
T Consensus 116 --i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~--~~~~~v~l~~p~n~ptG~~ 191 (456)
T 2ez2_A 116 --YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGA--ENIAYICLAVTVNLAGGQP 191 (456)
T ss_dssp --EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG--GGEEEEEEESSBTTTTSBC
T ss_pred --EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccc--cceeEEEEeccCCCCCCcc
Confidence 3456667 787888999999999999873 278999999999986531 1234666665665 78877
Q ss_pred cc---HHHHHHHHHhcCCEEEEecccccc---------ccccchhh-h---hhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 701 DN---LEELGPICQEYNIWLHVDAAYAGS---------ALLLPEYA-H---LKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 701 Dp---l~eIa~i~~~~glwLHVDaA~Gg~---------~l~~~~~r-~---~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
-+ +++|+++|++||+|+|+|.+|+.+ ..+....- . .+ + ..+|.+++++||+++.| ..|++
T Consensus 192 ~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~-~-~~~d~~~~S~kk~~~~~-~gG~~ 267 (456)
T 2ez2_A 192 VSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEM-F-SYADGCTMSGKKDCLVN-IGGFL 267 (456)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHH-H-TTCSEEEEETTTTTCCS-SCEEE
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhh-c-ccCCEEEEeCcccCCCC-ceeEE
Confidence 54 999999999999999999999864 11211100 0 01 1 23689999999998866 35654
No 126
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.33 E-value=1.5e-11 Score=134.53 Aligned_cols=178 Identities=10% Similarity=0.016 Sum_probs=131.8
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc-
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK- 631 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~- 631 (764)
.|...+...++.+.+.+|+.+.+|++.+ ....+||+|||+++..++.+... +.
T Consensus 71 ~y~~~~g~~~lr~~la~~l~~~~g~~~~-------~~~i~~~~g~~~al~~~~~~l~~-------------------~g~ 124 (398)
T 3ele_A 71 GYTSAQGDVETRAAIAEFLNNTHGTHFN-------ADNLYMTMGAAASLSICFRALTS-------------------DAY 124 (398)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCCC-------GGGEEEESSHHHHHHHHHHHHCC-------------------STT
T ss_pred CcCCCCCcHHHHHHHHHHHHHHhCCCCC-------hHHEEEccCHHHHHHHHHHHHcC-------------------CCC
Confidence 3444455578999999999999986432 24689999999999888775411 12
Q ss_pred eEEEecCCcchhHHHHHHhCCCceEEEecCC-CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHHH
Q psy13453 632 LVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEELG 707 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~-~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eIa 707 (764)
..|++..-+|.++..++...|.+++.+|.++ ++.+|+++|++++++. +-+|+.+..++.+|.+-+ +.+|+
T Consensus 125 d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~l~ 198 (398)
T 3ele_A 125 DEFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERINAH------TRGVIINSPNNPSGTVYSEETIKKLS 198 (398)
T ss_dssp CEEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTT------EEEEEECSSCTTTCCCCCHHHHHHHH
T ss_pred CEEEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCcC------CCEEEEcCCCCCCCCCCCHHHHHHHH
Confidence 2577888899999999999999999999985 5689999999988643 447777788999999876 77777
Q ss_pred HHHHh------cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCC-CCcCceee
Q psy13453 708 PICQE------YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLL-VNFDCSAM 763 (764)
Q Consensus 708 ~i~~~------~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~-~P~~~g~l 763 (764)
++|++ ||+|+++|.+|+.+..-........ .....+-+..++||+++ ....+|.+
T Consensus 199 ~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~ 260 (398)
T 3ele_A 199 DLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVT-KYYDNTLVCYSYSKSLSLPGERIGYV 260 (398)
T ss_dssp HHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGG-GTCSSEEEEEESTTTSSCTTTCCEEE
T ss_pred HHHHhhhhccCCCeEEEEeccccccccCCCCcCChH-hhcCCeEEEEehhhcCCCccceeEEE
Confidence 89999 9999999999987543211111111 11123677889999997 44556665
No 127
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.33 E-value=6.1e-12 Score=137.19 Aligned_cols=154 Identities=14% Similarity=0.093 Sum_probs=116.1
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
.++.+.+++++|.+ ..++|+|||+|+..++.+.+ . .++..|++++.+|.+.
T Consensus 42 ~~l~~~la~~~~~~-----------~~~~~~~gt~al~~~~~~~~---~---------------~~gd~Vl~~~~~~~~~ 92 (393)
T 1mdo_A 42 QELEAAFCRLTGNQ-----------YAVAVSSATAGMHIALMALG---I---------------GEGDEVITPSMTWVST 92 (393)
T ss_dssp HHHHHHHHHHHCCS-----------EEEEESCHHHHHHHHHHHTT---C---------------CTTCEEEEESSSCHHH
T ss_pred HHHHHHHHHHhCCC-----------cEEEecChHHHHHHHHHHcC---C---------------CCCCEEEeCCCccHhH
Confidence 34445666666653 37899999999988887542 0 0123588899999999
Q ss_pred HHHHHhCCCceEEEecCCC-CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccc
Q psy13453 645 EKSAIIGDVPVRQLRSDDN-GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAY 723 (764)
Q Consensus 645 ~kAa~~lGl~v~~Vp~d~~-g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~ 723 (764)
..+++..|++++.+|++++ +.+|+++|+++|++. +-+|+.+ +.+|.+.|+++|+++|++||+|+++|+||
T Consensus 93 ~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li~D~a~ 163 (393)
T 1mdo_A 93 LNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQ------TKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAAH 163 (393)
T ss_dssp HHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTT------EEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECTT
T ss_pred HHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCCC------ceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECcc
Confidence 9999999999999999865 789999999998643 3355543 46899999999999999999999999999
Q ss_pred cccccccchhhhhhcCCCcccEEEEcCC--ccCCCCcCceee
Q psy13453 724 AGSALLLPEYAHLKRGLEYVDSFDFNTH--KWLLVNFDCSAM 763 (764)
Q Consensus 724 Gg~~l~~~~~r~~l~gie~aDSit~d~H--K~l~~P~~~g~l 763 (764)
+.+..+.. +. + +. .|.++.++| |+++.+ .+|++
T Consensus 164 ~~g~~~~~--~~-~-~~--~d~~~~S~~k~K~l~~~-~~g~~ 198 (393)
T 1mdo_A 164 ATGTSYKG--RH-I-GA--RGTAIFSFHAIKNITCA-EGGIV 198 (393)
T ss_dssp CTTCEETT--EE-T-TS--SSEEEEECCTTSSSCSS-SCEEE
T ss_pred ccCCeECC--ee-c-CC--CCeEEEeCCCCCccccc-cceEE
Confidence 86443321 11 1 21 699999999 999754 44544
No 128
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.33 E-value=1.1e-11 Score=135.52 Aligned_cols=191 Identities=7% Similarity=-0.082 Sum_probs=133.1
Q ss_pred HHHHHHHHhhcccCccccCCchHHH-HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhh
Q psy13453 538 IVGDMLSGAFGLIGFSWLSSPACTE-LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHW 616 (764)
Q Consensus 538 ~lad~l~~~lN~n~~~~~~sp~~t~-lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~ 616 (764)
.+.+.+...++.....|... ..+ +++.+.+|+.+.+|++.+ ....++|+|||+++..++.+...
T Consensus 45 ~v~~a~~~~~~~~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~-------~~~v~~t~g~~~al~~~~~~l~~------ 109 (390)
T 1d2f_A 45 CIIEALNQRLMHGVFGYSRW--KNDEFLAAIAHWFSTQHYTAID-------SQTVVYGPSVIYMVSELIRQWSE------ 109 (390)
T ss_dssp HHHHHHHHHHTTCCCCCCCS--CCHHHHHHHHHHHHHHSCCCCC-------GGGEEEESCHHHHHHHHHHHSSC------
T ss_pred HHHHHHHHHHhCCCCCCCCC--ChHHHHHHHHHHHHHhcCCCCC-------HHHEEEcCCHHHHHHHHHHHhcC------
Confidence 34445555554333334332 556 888899999988885432 13679999999998887764311
Q ss_pred ccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCC---CcccHHHHHHHHHHhhhcCCCceEEEEeec
Q psy13453 617 QSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDN---GVLRGDALLTAVKEDLAKGLIPCCLIATLG 693 (764)
Q Consensus 617 ~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~---g~md~~~Le~~I~~~~~~G~~p~~VvataG 693 (764)
++..|++..-+|.+...++...|.+++.+|.+.+ +.+|+++|+++|++. .+-+|+.+..
T Consensus 110 -------------~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~l~~p 171 (390)
T 1d2f_A 110 -------------TGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKP-----ECKIMLLCSP 171 (390)
T ss_dssp -------------TTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTST-----TEEEEEEESS
T ss_pred -------------CCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccC-----CCeEEEEeCC
Confidence 1124777888999999999999999999998743 369999999998641 2446677788
Q ss_pred cCCcccccc---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCC-c-ccEEEEcCCccCCCC-cCceee
Q psy13453 694 TTGTCAFDN---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE-Y-VDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 694 TT~~GaiDp---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie-~-aDSit~d~HK~l~~P-~~~g~l 763 (764)
++.+|.+-| +++|+++|++||+|+++|.+|+.+..-...... +.++. . .|. ..++||+++.| +.+|++
T Consensus 172 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~ 245 (390)
T 1d2f_A 172 QNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIP-WSNVARGDWAL-LTSGSKSFNIPALTGAYG 245 (390)
T ss_dssp CTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCC-GGGTCCSSEEE-EECSHHHHTCGGGCCEEE
T ss_pred CCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcC-HHHcchhhHhh-ccCccHhhcccChhheEE
Confidence 899999855 899999999999999999999985432111111 11221 1 255 99999999743 345654
No 129
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.31 E-value=8.2e-12 Score=134.49 Aligned_cols=160 Identities=14% Similarity=0.110 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS 643 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S 643 (764)
..++.+++++++|.+. .+|++|||+++..++.++...- .+.+|+++...|++
T Consensus 50 ~~~l~~~la~~~~~~~-----------~i~~~~g~~a~~~a~~~~~~~g-----------------~~~vvi~~~~~~~~ 101 (359)
T 3pj0_A 50 IEDFETKIAKILGKQS-----------AVFFPSGTMAQQIALRIWADRK-----------------ENRRVAYHPLSHLE 101 (359)
T ss_dssp HHHHHHHHHHHHTCSE-----------EEEESCHHHHHHHHHHHHHHHH-----------------TCCEEEECTTCHHH
T ss_pred HHHHHHHHHHHhCCCc-----------EEEeCCHHHHHHHHHHHHHhcC-----------------CCcEEEEeccceee
Confidence 3445568888888754 4788999999998888765431 02257778888887
Q ss_pred HHHH---HHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCc-ccccc---HHHHHHHHHhcCCE
Q psy13453 644 VEKS---AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGT-CAFDN---LEELGPICQEYNIW 716 (764)
Q Consensus 644 v~kA---a~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~-GaiDp---l~eIa~i~~~~glw 716 (764)
.... +...|..++.+|. +++.+|+++|+++ .+ .+-+|+.+..++.+ |.+-| +++|+++|++||+|
T Consensus 102 ~~~~~~~~~~~g~~~~~v~~-~~~~~d~~~l~~~-~~------~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~ 173 (359)
T 3pj0_A 102 IHEQDGLKELQQITPLLLGT-ANQLLTIDDIKSL-RE------PVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGIS 173 (359)
T ss_dssp HSSTTHHHHHHCCEEEECSC-TTSCCCHHHHHTC-SS------CCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCE
T ss_pred ehhcchHHHhcCceEEecCC-cCCCcCHHHHHhc-cC------CceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 6543 2456888888887 5789999999887 21 24466666665555 67755 55559999999999
Q ss_pred EEEecccccccccc--chhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 717 LHVDAAYAGSALLL--PEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 717 LHVDaA~Gg~~l~~--~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+|+|+||..+.... ....... ..+|.+++++||+++.|.+ |++
T Consensus 174 li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~~~g-g~~ 218 (359)
T 3pj0_A 174 LHLDGARLWEITPFYQKSAEEIC---ALFDSVYVSFYKGIGGIAG-AIL 218 (359)
T ss_dssp EEEEETTCGGGHHHHTCCHHHHH---TTCSEEEEESSSTTCCSSC-EEE
T ss_pred EEEECcchhcchhhhCCCHHHhh---ccCCEEEEeccccCCCcce-EEE
Confidence 99999986543211 1112222 3459999999999998866 554
No 130
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.31 E-value=1.2e-11 Score=137.14 Aligned_cols=152 Identities=9% Similarity=0.009 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS 643 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S 643 (764)
-.++.+++++++|.+ ..++++||++++..++.+.. . ++..|+++..+|.+
T Consensus 64 ~~~l~~~ia~~~g~~-----------~~i~~~~g~~ai~~~~~~l~----~---------------~gd~Vl~~~~~y~~ 113 (404)
T 1e5e_A 64 VSNLEGKIAFLEKTE-----------ACVATSSGMGAIAATVLTIL----K---------------AGDHLISDECLYGC 113 (404)
T ss_dssp HHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHHHC----C---------------TTCEEEEESCCCHH
T ss_pred HHHHHHHHHHHhCCC-----------cEEEeCChHHHHHHHHHHHh----C---------------CCCEEEEeCCCchh
Confidence 334556677777774 36788899999888776431 1 12257788999998
Q ss_pred HHH----HHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh-cCCEEE
Q psy13453 644 VEK----SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE-YNIWLH 718 (764)
Q Consensus 644 v~k----Aa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~-~glwLH 718 (764)
... .+...|+.++.+|.+ |+++|+++|++. +-+|+.+..++.+|.+.|+++|+++|++ ||+|++
T Consensus 114 ~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~------t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li 182 (404)
T 1e5e_A 114 THALFEHALTKFGIQVDFINTA-----IPGEVKKHMKPN------TKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVI 182 (404)
T ss_dssp HHHHHHTHHHHTTCEEEEECTT-----STTHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEE
T ss_pred HHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCCC------CcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEE
Confidence 888 677889999999876 788999888643 4588888999999999999999999999 999999
Q ss_pred EeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC--ceee
Q psy13453 719 VDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD--CSAM 763 (764)
Q Consensus 719 VDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~--~g~l 763 (764)
+|.+|+.+....+- . + .+|.+..++||+++.|.+ +|++
T Consensus 183 ~De~~~~~~~~~~~-~--~----~~di~~~S~sK~~~~~g~ri~G~~ 222 (404)
T 1e5e_A 183 ADNTFCSPMITNPV-D--F----GVDVVVHSATKYINGHTDVVAGLI 222 (404)
T ss_dssp EECTTTCTTTCCGG-G--G----TCSEEEEETTTTTTCSSCCCCEEE
T ss_pred EECCCchhhhCCcc-c--c----CCEEEEEcCccccCCCCCCeEEEE
Confidence 99999987643221 1 1 369999999999998876 5765
No 131
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.31 E-value=2.1e-11 Score=133.62 Aligned_cols=152 Identities=16% Similarity=0.097 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS 643 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S 643 (764)
..++.+.+++++|.++ .+++++||+|+..++.++. . ++..|+++..+|.+
T Consensus 54 ~~~l~~~la~~~~~~~-----------~i~~~sGt~a~~~~~~~~~----~---------------~g~~vl~~~~~~~~ 103 (386)
T 1cs1_A 54 RDVVQRALAELEGGAG-----------AVLTNTGMSAIHLVTTVFL----K---------------PGDLLVAPHDCYGG 103 (386)
T ss_dssp HHHHHHHHHHHHTCSE-----------EEEESSHHHHHHHHHHHHC----C---------------TTCEEEEETTCCHH
T ss_pred HHHHHHHHHHHhCCCc-----------EEEeCCHHHHHHHHHHHHh----C---------------CCCEEEEecCCcHh
Confidence 3344556677777642 4555666999988877651 1 11247778888887
Q ss_pred HHHH----HHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEE
Q psy13453 644 VEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHV 719 (764)
Q Consensus 644 v~kA----a~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHV 719 (764)
+..+ +...|++++.+|.+ |+++|+++|+++ +.+|+.+..++.+|.+.|+++|+++|++||+|+|+
T Consensus 104 ~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~ 172 (386)
T 1cs1_A 104 SYRLFDSLAKRGCYRVLFVDQG-----DEQALRAALAEK------PKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVV 172 (386)
T ss_dssp HHHHHHHHHTTTSCEEEEECTT-----CHHHHHHHHHTC------CSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhcCCEEEEeCCC-----CHHHHHHhhccC------CcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEE
Confidence 6554 35578888888874 899999999753 45788889999999999999999999999999999
Q ss_pred eccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCc--eee
Q psy13453 720 DAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDC--SAM 763 (764)
Q Consensus 720 DaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~--g~l 763 (764)
|.+|+++....+. . . .+|.++.++||+++.|.+. |++
T Consensus 173 De~~~~~~~~~~~-~---~---~~di~~~s~sK~~~~~~~~~~G~~ 211 (386)
T 1cs1_A 173 DNTFLSPALQNPL-A---L---GADLVLHSCTKYLNGHSDVVAGVV 211 (386)
T ss_dssp ECTTTCTTTCCGG-G---G---TCSEEEEETTTTTTCSSCCCCEEE
T ss_pred ECCCcccccCCcc-c---c---CceEEEEcCcccccCCCCceeEEE
Confidence 9999987654321 1 1 3599999999999999874 765
No 132
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.30 E-value=4e-11 Score=131.86 Aligned_cols=165 Identities=14% Similarity=0.083 Sum_probs=118.1
Q ss_pred CchHHHHHHHHHHHH-HHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 557 SPACTELEVLVMNWL-GKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 557 sp~~t~lE~~v~~~l-a~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
+|...++|+. + ++++|.. ...++|+|||+|+..++.+.. . .+.-.|+
T Consensus 35 ~~~~~~l~~~----~~a~~~g~~----------~~~v~~~sgt~al~~al~~l~---~---------------~~Gd~Vi 82 (377)
T 3ju7_A 35 GPINQRFEQT----IMSGFFQNR----------GAVTTVANATLGLMAAIQLKK---R---------------KKGKYAL 82 (377)
T ss_dssp CHHHHHHHHH----HHHHTSTTC----------SEEEEESCHHHHHHHHHHHHS---C---------------TTCCEEE
T ss_pred CHHHHHHHHH----HHHHHhCCC----------CeEEEeCCHHHHHHHHHHHcC---C---------------CCcCEEE
Confidence 5666666664 5 7777722 247999999999988876530 0 1123588
Q ss_pred ecCCcchhHHHHHHhCCCceEEEecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcC
Q psy13453 636 TSDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYN 714 (764)
Q Consensus 636 ~S~~aH~Sv~kAa~~lGl~v~~Vp~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~g 714 (764)
++..+|.+...++...|..++.++++ +++.+|+++|+++|..... .+-+|+ .++.+|...|+++|+++|+ ||
T Consensus 83 ~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~---~tk~v~---~~~~~G~~~~~~~i~~la~-~~ 155 (377)
T 3ju7_A 83 MPSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKE---EVAIVV---PYATFGSWMNLEEYEELEK-KG 155 (377)
T ss_dssp EESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGG---GEEEEC---CBCGGGBCCCCHHHHHHHH-TT
T ss_pred ECCCCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCC---CceEEE---EECCCCCccCHHHHHHHHh-cC
Confidence 99999999999999999999999998 6789999999999943210 122444 3566899999999999999 99
Q ss_pred CEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 715 IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 715 lwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+++|+|+||+.+...-. +..-..+..++.+++++||+++.+ ..|++
T Consensus 156 ~~vi~D~a~a~g~~~~~--~~~g~~~~d~~~~S~~~~K~l~~g-~gG~~ 201 (377)
T 3ju7_A 156 VPVVVDAAPGFGLMNGG--MHYGQDFSGMIIYSFHATKPFGIG-EGGLI 201 (377)
T ss_dssp CCBEEECTTCTTCEETT--EETTTTCSSEEEEECBTTSSSCCB-SCEEE
T ss_pred CEEEEECCCccCCeECC--EeccCCCCcEEEEECCCCCcCCCC-CcEEE
Confidence 99999999986543221 111011224567777789999874 44443
No 133
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.30 E-value=1.2e-11 Score=135.83 Aligned_cols=165 Identities=13% Similarity=0.127 Sum_probs=111.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecC
Q psy13453 559 ACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSD 638 (764)
Q Consensus 559 ~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~ 638 (764)
....+|..+.+++++++|.+.. -+++++||++|..++.+... ++..|+++.
T Consensus 73 ~~~~~~~~~~~~la~~~~~~~~----------~v~~~sGs~a~~~a~~~~~~-------------------~gd~v~~~~ 123 (420)
T 3gbx_A 73 YVDVVEQLAIDRAKELFGADYA----------NVQPHSGSQANFAVYTALLQ-------------------PGDTVLGMN 123 (420)
T ss_dssp -CHHHHHHHHHHHHHHHTCSEE----------ECCCSSHHHHHHHHHHHHCC-------------------TTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCc----------eeEecCcHHHHHHHHHHhcC-------------------CCCEEEecc
Confidence 3456788888999999998653 34456669998888765411 122577788
Q ss_pred CcchhHHHHH---HhCCC--ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc
Q psy13453 639 QSNSSVEKSA---IIGDV--PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY 713 (764)
Q Consensus 639 ~aH~Sv~kAa---~~lGl--~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~ 713 (764)
.+|.+..... ...|. ....++.++++.+|+++|+++|++. .+.+|+.+.++ .|...|+++|+++|++|
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~--~~~~~~l~~l~~l~~~~ 196 (420)
T 3gbx_A 124 LAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEH-----KPKMIIGGFSA--YSGVVDWAKMREIADSI 196 (420)
T ss_dssp EC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHH-----CCSEEEECCTT--CCSCCCHHHHHHHHHHT
T ss_pred hhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhc-----CCeEEEEecCc--cCCccCHHHHHHHHHHc
Confidence 8887744221 22333 4456677888999999999999874 13466665544 36788999999999999
Q ss_pred CCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 714 NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 714 glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
|+|+++|.+|+.+......+... ++.+|.++.++||+++.|.+ |++
T Consensus 197 ~~~li~De~~~~~~~~~~~~~~~---~~~~di~~~s~sK~~~g~~g-g~~ 242 (420)
T 3gbx_A 197 GAYLFVDMAHVAGLIAAGVYPNP---VPHAHVVTTTTHKTLAGPRG-GLI 242 (420)
T ss_dssp TCEEEEECTTTHHHHHTTSSCCS---TTTSSEEEEESSGGGCSCSC-EEE
T ss_pred CCEEEEECCcchhceecccCCcc---cccCCEEEeecccCCCCCCc-eEE
Confidence 99999999987655433222222 23479999999999977775 554
No 134
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.29 E-value=2e-12 Score=139.13 Aligned_cols=162 Identities=14% Similarity=-0.034 Sum_probs=120.0
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCCh-HHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTA-SEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGg-TeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
++....+..++.+++++++|.++. ...+||+|+ |+++..++.+.... + .+...|+
T Consensus 43 ~~~~~~~~~~l~~~la~~~g~~~~--------~~v~~~~g~gt~al~~~~~~l~~~---------------~-~~g~~vi 98 (360)
T 1w23_A 43 SQSYEEVHEQAQNLLRELLQIPND--------YQILFLQGGASLQFTMLPMNLLTK---------------G-TIGNYVL 98 (360)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCTT--------EEEEEESSHHHHHHHHHHHHHCCT---------------T-CEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCC--------ceEEEECCcchHHHHHHHHHhcCC---------------C-CcccEEE
Confidence 677777888899999999998631 257899998 99987766533210 0 1133678
Q ss_pred ecCCcchhHHHHHHhCCCceEEEecCC-CCcccHHHHHH-HHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc
Q psy13453 636 TSDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLT-AVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY 713 (764)
Q Consensus 636 ~S~~aH~Sv~kAa~~lGl~v~~Vp~d~-~g~md~~~Le~-~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~ 713 (764)
++..+|++.. .+...| +++.||+++ +|.+|+++|++ +|++ .+-+|+.+..++.+|.+-| +|+++|
T Consensus 99 ~~~~~~~~~~-~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~~------~~k~v~~~~~~nptG~~~~-----~i~~~~ 165 (360)
T 1w23_A 99 TGSWSEKALK-EAKLLG-ETHIAASTKANSYQSIPDFSEFQLNE------NDAYLHITSNNTIYGTQYQ-----NFPEIN 165 (360)
T ss_dssp CSHHHHHHHH-HHHTTS-EEEEEEECGGGTSCSCCCGGGCCCCT------TEEEEEEESEETTTTEECS-----SCCCCC
T ss_pred ecchhHHHHH-HHHHhC-CeEEeecccccCcCCccchHhhccCC------CCCEEEEeCCCCCcceecc-----cccccC
Confidence 8888998854 456789 999999985 77899999988 7633 2457888888999999844 344589
Q ss_pred CCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 714 NIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 714 glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
|+|+++|+||+.+....+ +..+ |.++.++||+++ |.|+|+++
T Consensus 166 ~~~li~D~a~~~~~~~~~-----~~~~---di~~~s~sK~~~-~~G~G~~~ 207 (360)
T 1w23_A 166 HAPLIADMSSDILSRPLK-----VNQF---GMIYAGAQKNLG-PSGVTVVI 207 (360)
T ss_dssp SSCEEEECTTTTTSSCCC-----GGGC---SEEEEETTTTTS-CTTCEEEE
T ss_pred CceEEEechhhcCCCCcC-----cccC---CEEEEEcccccC-CCCcEEEE
Confidence 999999999987653321 1222 899999999887 77888764
No 135
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.29 E-value=2.3e-11 Score=131.35 Aligned_cols=163 Identities=13% Similarity=0.061 Sum_probs=122.8
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
.++.+++++++|.+++ ..+||+|||+++..++.+.. . ++..|+++..+|.++
T Consensus 70 ~~lr~~la~~~~~~~~---------~v~~~~g~t~a~~~~~~~~~----~---------------~gd~vl~~~~~~~~~ 121 (363)
T 3ffh_A 70 SSLRKEVADFYQLEEE---------ELIFTAGVDELIELLTRVLL----D---------------TTTNTVMATPTFVQY 121 (363)
T ss_dssp HHHHHHHHHHHTCCGG---------GEEEESSHHHHHHHHHHHHC----S---------------TTCEEEEEESSCHHH
T ss_pred HHHHHHHHHHhCCChh---------hEEEeCCHHHHHHHHHHHHc----c---------------CCCEEEEcCCChHHH
Confidence 4566788888887653 68999999999988876531 1 112577788899999
Q ss_pred HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc--CCEEEEecc
Q psy13453 645 EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY--NIWLHVDAA 722 (764)
Q Consensus 645 ~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~--glwLHVDaA 722 (764)
..++...|.+++.+|.++++.+|+++|++++++. +-+|+.+..++.+|.+-|+++|.++|+.+ |+|+|+|.+
T Consensus 122 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~ 195 (363)
T 3ffh_A 122 RQNALIEGAEVREIPLLQDGEHDLEGMLNAIDEK------TTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEA 195 (363)
T ss_dssp HHHHHHHTCEEEEEECCTTSCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECT
T ss_pred HHHHHHcCCEEEEecCCCCCCcCHHHHHHhcccC------CCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCc
Confidence 9999999999999999988999999999998643 45777888999999999999999999888 999999999
Q ss_pred ccccccccchhhhhh--cCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 723 YAGSALLLPEYAHLK--RGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 723 ~Gg~~l~~~~~r~~l--~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
|+.+.. .+....+ .+...-+-+..+++|+++.| ..+|++
T Consensus 196 ~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~ 237 (363)
T 3ffh_A 196 YIEYVT--PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYG 237 (363)
T ss_dssp TGGGCS--SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEE
T ss_pred hHhhcC--ccccCHHHHhhcCCCEEEEeechhhhcCchhceeee
Confidence 996543 1111111 01112245677999998733 334654
No 136
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.29 E-value=5.9e-11 Score=135.31 Aligned_cols=154 Identities=12% Similarity=0.099 Sum_probs=125.4
Q ss_pred cCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCcccccc
Q psy13453 550 IGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIR 629 (764)
Q Consensus 550 n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~ 629 (764)
....|..++....+.+.+.+|+.+..|++.+ ....++|+|+|+++..++.+... .
T Consensus 126 ~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-------~~~i~~t~G~~~al~~~~~~l~~----~-------------- 180 (500)
T 3tcm_A 126 ATGAYSHSQGIHGLRDAIASGIASRDGFPAN-------ADDIFLTDGASPGVHLMMQLLIR----N-------------- 180 (500)
T ss_dssp CSSSCCCTTCCHHHHHHHHHHHHHHHSSCCC-------GGGEEEESSSHHHHHHHHHHHCC----S--------------
T ss_pred cCCCcCCCcChHHHHHHHHHHHHhhcCCCCC-------cccEEEcCCHHHHHHHHHHHHcC----C--------------
Confidence 3456677777889999999999998886532 24689999999998877764310 0
Q ss_pred CceEEEecCCcchhHHHHHHhCCCceEEEecCCC--CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHH
Q psy13453 630 NKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDN--GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLE 704 (764)
Q Consensus 630 ~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~--g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~ 704 (764)
+...|+++.-+|.++..++...|.+++.+|++++ +.+|+++|+++|++..++|..+-+|+.+..++.||.+ ++++
T Consensus 181 ~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~ 260 (500)
T 3tcm_A 181 EKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQY 260 (500)
T ss_dssp TTEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHH
T ss_pred CCCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHH
Confidence 1236888999999999999999999999999854 5899999999999877777677777888889999998 6688
Q ss_pred HHHHHHHhcCCEEEEecccccccc
Q psy13453 705 ELGPICQEYNIWLHVDAAYAGSAL 728 (764)
Q Consensus 705 eIa~i~~~~glwLHVDaA~Gg~~l 728 (764)
+|+++|++||+|+++|.+|+....
T Consensus 261 ~i~~la~~~~~~li~Deay~~~~~ 284 (500)
T 3tcm_A 261 DIVKFCKNEGLVLLADEVYQENIY 284 (500)
T ss_dssp HHHHHHHHHTCEEEEECTTTTCBC
T ss_pred HHHHHHHHcCCEEEEecCcccccc
Confidence 888889999999999999987543
No 137
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.29 E-value=3e-11 Score=132.39 Aligned_cols=188 Identities=13% Similarity=0.057 Sum_probs=124.6
Q ss_pred HHHHHHHHHhhccc---CccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHh
Q psy13453 537 SIVGDMLSGAFGLI---GFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMI 613 (764)
Q Consensus 537 ~~lad~l~~~lN~n---~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~ 613 (764)
..+.+.+...+... ...|...+...++++.+.+|+ |.++ ...++|+|+|+++..++.+..
T Consensus 50 ~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~----g~~~---------~~v~~~~g~~~al~~~~~~~~---- 112 (397)
T 2zyj_A 50 EEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWI----GVRP---------EEVLITTGSQQALDLVGKVFL---- 112 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHH----TSCG---------GGEEEESHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHh----CCCh---------hhEEEeccHHHHHHHHHHHhC----
Confidence 34444444444321 233433344556666555554 6544 367899999999888776541
Q ss_pred hhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEE-EEee
Q psy13453 614 NHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCL-IATL 692 (764)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~V-vata 692 (764)
. ++..|++..-+|.+...++...|.+++.+|.++++ +|+++|+++|++. .+-+| +.+.
T Consensus 113 ~---------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~d~~~l~~~l~~~-----~~~~v~~~~~ 171 (397)
T 2zyj_A 113 D---------------EGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEEG-PDLDALEEVLKRE-----RPRFLYLIPS 171 (397)
T ss_dssp C---------------TTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTE-ECHHHHHHHHHHC-----CCSCEEECCB
T ss_pred C---------------CCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCCC-CCHHHHHHHHhhc-----CCeEEEECCC
Confidence 1 11246778888999999999999999999998766 9999999999762 12244 4567
Q ss_pred ccCCcccccc---HHHHHHHHHhcCCEEEEeccccccccccc---hhhhh-hcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 693 GTTGTCAFDN---LEELGPICQEYNIWLHVDAAYAGSALLLP---EYAHL-KRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 693 GTT~~GaiDp---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~---~~r~~-l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
.++.+|.+-| +++|+++|++||+|+++|.+|+.+..-.. ..... ......-.-+..++||+++ | +.+|++
T Consensus 172 ~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~ 249 (397)
T 2zyj_A 172 FQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFA 249 (397)
T ss_dssp SCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEE
T ss_pred CcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccc-ccceeEEE
Confidence 7788898865 55899999999999999999998543111 11111 1100011366789999999 5 567765
No 138
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.29 E-value=2.5e-11 Score=143.75 Aligned_cols=166 Identities=15% Similarity=0.135 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS 643 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S 643 (764)
-.++.+.+++++|.+.. -++++|+|.||+.++.+.. .+...|+++..+|.|
T Consensus 197 i~eaE~~lA~~fGa~~a----------~~v~nGts~An~~ai~al~-------------------~pGD~VLv~r~~H~S 247 (715)
T 3n75_A 197 HKEAEQYIARVFNADRS----------YMVTNGTSTANKIVGMYSA-------------------PAGSTILIDRNCHKS 247 (715)
T ss_dssp HHHHHHHHHHHHTCSEE----------EEESSHHHHHHHHHHHHHC-------------------CTTCEEEEESSCCHH
T ss_pred HHHHHHHHHHHhCCCCc----------eEECcHHHHHHHHHHHHhC-------------------CCCCEEEECCCccHH
Confidence 44556688999998653 2445665788877766431 123368899999999
Q ss_pred HHHHHHhCCCceEEEecCCC-Cc----c-----cHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc
Q psy13453 644 VEKSAIIGDVPVRQLRSDDN-GV----L-----RGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY 713 (764)
Q Consensus 644 v~kAa~~lGl~v~~Vp~d~~-g~----m-----d~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~ 713 (764)
+..++.+.|..++.++++.+ +. + |+++|+++|++... -+.|.+|++|.+ |.+|.+-|+++|+++|+++
T Consensus 248 ~~~~l~lsGa~pv~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~-~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~ 325 (715)
T 3n75_A 248 LTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK 325 (715)
T ss_dssp HHHHHHHSCCEEEEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTT-CCSCSEEEEESS-CTTSEEECHHHHHHHCCCS
T ss_pred HHHHHHHcCCEEEEEeccccccccccCcccccCCHHHHHHHHhhCcC-ccCceEEEEECC-CCCCccCCHHHHHHHhCcC
Confidence 99999999999999887532 22 4 89999999987432 123567888888 8899999999999999876
Q ss_pred CCEEEEeccccccccccchhhhhhcCCC---cccEE---EEcCCccCCCCcCceee
Q psy13453 714 NIWLHVDAAYAGSALLLPEYAHLKRGLE---YVDSF---DFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 714 glwLHVDaA~Gg~~l~~~~~r~~l~gie---~aDSi---t~d~HK~l~~P~~~g~l 763 (764)
++|||.||++++.+.|.++.. .++. .+|.+ +.++||+|+++.++|++
T Consensus 326 --~livDEAH~~~~~f~~~~~~~-~al~~g~~aD~vii~~~S~hKtL~gltqgs~i 378 (715)
T 3n75_A 326 --SIHFDSAWVPYTNFSPIYEGK-CGMSGGRVEGKVIYETQSTHKLLAAFSQASMI 378 (715)
T ss_dssp --EEEEECTTCTTGGGSGGGTTS-STTSSSCCTTCEEEEEECHHHHSSCCTTCEEE
T ss_pred --cEEEccccccccccCCccccc-cccccCcCCCEEEEEEecccccccCCCCeeEE
Confidence 489999999887666654321 1221 36876 99999999999888876
No 139
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.29 E-value=2.5e-11 Score=133.86 Aligned_cols=193 Identities=13% Similarity=0.101 Sum_probs=131.7
Q ss_pred HHHHHHHhhccc-CccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCC-CcEEEeCChHHHHHHHHHHHHHHHhhhh
Q psy13453 539 VGDMLSGAFGLI-GFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGP-GGGIIQSTASEATLVSILVAKRKMINHW 616 (764)
Q Consensus 539 lad~l~~~lN~n-~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~-~~GvfTsGgTeANl~Al~aAR~~~~~~~ 616 (764)
+.+.+...+... ...|...+...++++.+.+|+.+.+|.+.+ . ...++|+|||+++..++.+.. .
T Consensus 55 v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~-------~~~~v~~t~g~~~a~~~~~~~~~----~-- 121 (412)
T 2x5d_A 55 IVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQID-------PESEAIVTIGSKEGLAHLMLATL----D-- 121 (412)
T ss_dssp HHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCC-------TTTSEEEESCHHHHHHHHHHHHC----C--
T ss_pred HHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC-------CCcCEEEcCChHHHHHHHHHHhC----C--
Confidence 444455444332 223443455678999999999888886421 1 258999999999988877541 1
Q ss_pred ccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCC--CcccHHHHHHHHHHhhhcCCCceEEEEeecc
Q psy13453 617 QSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDN--GVLRGDALLTAVKEDLAKGLIPCCLIATLGT 694 (764)
Q Consensus 617 ~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~--g~md~~~Le~~I~~~~~~G~~p~~VvataGT 694 (764)
++..|++..-+|.+...++...|.+++.+|.+++ +.+|+++|++++++. +-+|+.+..+
T Consensus 122 -------------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~l~~p~ 182 (412)
T 2x5d_A 122 -------------HGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPK------PRMMILGFPS 182 (412)
T ss_dssp -------------TTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESC------CSEEEEESSC
T ss_pred -------------CCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccC------ceEEEECCCC
Confidence 1125778889999999999999999999999864 358999999887532 3466667788
Q ss_pred CCccccc---cHHHHHHHHHhcCCEEEEeccccccccccchhh--hhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 695 TGTCAFD---NLEELGPICQEYNIWLHVDAAYAGSALLLPEYA--HLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 695 T~~GaiD---pl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r--~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+.+|.+- ++++|+++|++||+|+++|.+|+.+..-..... ..+.+....|-+..++||+++.| +.+|++
T Consensus 183 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 257 (412)
T 2x5d_A 183 NPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFM 257 (412)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEE
T ss_pred CCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEE
Confidence 8899884 578899999999999999999998653211111 11122224578899999999743 346665
No 140
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.28 E-value=6.1e-11 Score=133.64 Aligned_cols=156 Identities=13% Similarity=0.055 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
..-.++.+++++++|.+. .+++++|++|+..++.+.. . ++..|+++...|
T Consensus 114 ~~~~~l~~~lA~l~g~~~-----------~v~~~sG~~Ai~~al~~l~----~---------------~Gd~Vi~~~~~y 163 (445)
T 1qgn_A 114 PTTVVLEEKISALEGAES-----------TLLMASGMCASTVMLLALV----P---------------AGGHIVTTTDCY 163 (445)
T ss_dssp HHHHHHHHHHHHHHTCSE-----------EEEESCHHHHHHHHHHHHS----C---------------SSCEEEEETTSC
T ss_pred hHHHHHHHHHHHHhCCCc-----------EEEeCCHHHHHHHHHHHHh----C---------------CCCEEEEcCCCc
Confidence 344455567788888742 4677777899888876431 1 112477788888
Q ss_pred hhHHHH----HHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEE
Q psy13453 642 SSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWL 717 (764)
Q Consensus 642 ~Sv~kA----a~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwL 717 (764)
.+.... +...|+.++.||.+ |+++|+++|++++ +-+|++...++.+|.+.|+++|+++|++||+++
T Consensus 164 ~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~ai~~~t-----v~lV~le~p~NptG~v~dl~~I~~la~~~g~~l 233 (445)
T 1qgn_A 164 RKTRIFIETILPKMGITATVIDPA-----DVGALELALNQKK-----VNLFFTESPTNPFLRCVDIELVSKLCHEKGALV 233 (445)
T ss_dssp HHHHHHHHHTGGGGTCEEEEECSS-----CHHHHHHHHHHSC-----EEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEE
T ss_pred hhHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHHhccCC-----CCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEE
Confidence 877664 34578889988875 8999999998642 248888899999999999999999999999999
Q ss_pred EEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc--CceeeC
Q psy13453 718 HVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF--DCSAMW 764 (764)
Q Consensus 718 HVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~--~~g~l~ 764 (764)
|||.+|+.+....+ . .+ .+|.++.++||+++.+. ..|+++
T Consensus 234 ivD~a~~~~~~~~~----~--~~-g~Div~~S~sK~~gg~gd~~~G~l~ 275 (445)
T 1qgn_A 234 CIDGTFATPLNQKA----L--AL-GADLVLHSATKFLGGHNDVLAGCIS 275 (445)
T ss_dssp EEECTTTCTTTCCT----T--TT-TCSEEEECTTTTTTCSSSCCCEEEE
T ss_pred EEECCCcccccCCc----c--cc-CCEEEEECCcccccccccceEEEEE
Confidence 99999987643322 1 11 46999999999998543 267653
No 141
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.28 E-value=1.2e-11 Score=132.03 Aligned_cols=150 Identities=13% Similarity=0.012 Sum_probs=115.2
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
++.+.+++++|.+. .+++++||+|+..++.+.. . ++..|+++..+|.+..
T Consensus 2 ~l~~~la~~~g~~~-----------~i~~~sG~~a~~~~~~~~~----~---------------~g~~v~~~~~~~~~~~ 51 (331)
T 1pff_A 2 ALEGKIAKLEHAEA-----------CAATASGMGAIAASVWTFL----K---------------AGDHLISDDCLYGCTH 51 (331)
T ss_dssp HHHHHHHHHHTCSE-----------EEEESSHHHHHHHHHHHHC----C---------------TTCEEEEESCCCHHHH
T ss_pred hHHHHHHHHhCCCe-----------EEEeCChHHHHHHHHHHhc----C---------------CCCEEEEcCCCcchHH
Confidence 34567888888752 4677777999888876541 1 1224778889999887
Q ss_pred HHH----HhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh-cCCEEEEe
Q psy13453 646 KSA----IIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE-YNIWLHVD 720 (764)
Q Consensus 646 kAa----~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~-~glwLHVD 720 (764)
.++ ...|+.++.+|. +|+++|+++|+++ +-+|+.+..++.+|.+.|+++|+++|++ ||+++|+|
T Consensus 52 ~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D 120 (331)
T 1pff_A 52 ALFEHQLRKFGVEVDFIDM-----AVPGNIEKHLKPN------TRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVD 120 (331)
T ss_dssp HHHHTHHHHTTCEEEEECT-----TSTTHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEE
T ss_pred HHHHHHHHhcCCEEEEeCC-----CCHHHHHHhhcCC------CeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEE
Confidence 765 447888888876 4788898887643 4588889999999999999999999999 99999999
Q ss_pred ccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC--ceee
Q psy13453 721 AAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD--CSAM 763 (764)
Q Consensus 721 aA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~--~g~l 763 (764)
+||+.+....+. . . .+|.++.++||+++.|.+ +|++
T Consensus 121 ~a~~~~~~~~~~-~---~---~~d~~~~s~~K~~~~~~~r~~G~~ 158 (331)
T 1pff_A 121 NTFASPILTNPL-D---L---GVDIVVHSATKYINGHTDVVAGLV 158 (331)
T ss_dssp CTTTHHHHCCGG-G---G---TCSEEEEETTTTTSSSSSCCCEEE
T ss_pred CCCcccccCChh-h---c---CCcEEEEECccccCCCCCceEEEE
Confidence 999876543321 1 1 369999999999998877 6665
No 142
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.28 E-value=3.2e-11 Score=131.85 Aligned_cols=175 Identities=13% Similarity=0.030 Sum_probs=127.6
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 554 WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
|.......++.+.+.+|+....|.+-+ ....++|+|||+++..++.+.. . ++..
T Consensus 64 y~~~~g~~~lr~~ia~~~~~~~g~~~~-------~~~i~~t~g~~~al~~~~~~l~----~---------------~gd~ 117 (385)
T 1b5p_A 64 YAPPAGIPELREALAEKFRRENGLSVT-------PEETIVTVGGSQALFNLFQAIL----D---------------PGDE 117 (385)
T ss_dssp CCCTTCCHHHHHHHHHHHHHTTCCCCC-------GGGEEEESHHHHHHHHHHHHHC----C---------------TTCE
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCC-------hHHEEEcCChHHHHHHHHHHhc----C---------------CCCE
Confidence 433344678888899999888886421 1368999999999888776431 1 1224
Q ss_pred EEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHHHH
Q psy13453 634 AYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEELGP 708 (764)
Q Consensus 634 i~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eIa~ 708 (764)
|+++.-+|.++..+++..|.+++.||+++ ++.+|+++|+++|++. +-+|+.+..++.+|.+ +++++|++
T Consensus 118 Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~NPtG~~~~~~~l~~i~~ 191 (385)
T 1b5p_A 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPR------TKALVVNSPNNPTGAVYPKEVLEALAR 191 (385)
T ss_dssp EEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred EEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCC------CEEEEEeCCCCCCCCCcCHHHHHHHHH
Confidence 77788889999999999999999999974 5689999999888543 3467777889999998 56999999
Q ss_pred HHHhcCCEEEEecccccccccc--chhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 709 ICQEYNIWLHVDAAYAGSALLL--PEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 709 i~~~~glwLHVDaA~Gg~~l~~--~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+|++||+|+++|.+|+.+..-. ..... +.+ ..+-+..+++|+++.| +-+|.+
T Consensus 192 ~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~--~~~i~~~s~SK~~~~~G~RiG~~ 246 (385)
T 1b5p_A 192 LAVEHDFYLVSDEIYEHLLYEGEHFSPGR-VAP--EHTLTVNGAAKAFAMTGWRIGYA 246 (385)
T ss_dssp HHHHTTCEEEEECTTTTCBSSSCCCCGGG-TCT--TTEEEEEESTTTTTCGGGCCEEE
T ss_pred HHHHcCCEEEEEccchhcccCCCCCCHHH-cCC--CCEEEEEechhhcCCcccceEEE
Confidence 9999999999999998753311 11111 111 2356778999998754 226654
No 143
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.28 E-value=1.4e-10 Score=126.59 Aligned_cols=199 Identities=13% Similarity=-0.023 Sum_probs=133.0
Q ss_pred HHHHHHHHHH-hhcc-cCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCC--cEEEeCChHHHHHHHHHHHHHH
Q psy13453 536 PSIVGDMLSG-AFGL-IGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPG--GGIIQSTASEATLVSILVAKRK 611 (764)
Q Consensus 536 ~~~lad~l~~-~lN~-n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~--~GvfTsGgTeANl~Al~aAR~~ 611 (764)
+.+. +.+.. .+.. ....|...+...++.+.+.+|+....+.+-+ .. ..++|+|||+++..++......
T Consensus 47 ~~v~-~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~-------~~~~~i~~t~g~~~a~~~~~~~~~~~ 118 (397)
T 3fsl_A 47 QAVA-EAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLK-------QQRVATIQTLGGSGALKVGADFLKRY 118 (397)
T ss_dssp HHHH-HHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH-------TTCEEEEEESHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCccccc-------ccceEEEEcCCcHHHHHHHHHHHHhc
Confidence 4444 34444 4443 2334444455567777777777554332100 12 5789999999998876433211
Q ss_pred HhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEec--CCCCcccHHHHHHHHHHhhhcCCCceEEE
Q psy13453 612 MINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRS--DDNGVLRGDALLTAVKEDLAKGLIPCCLI 689 (764)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~--d~~g~md~~~Le~~I~~~~~~G~~p~~Vv 689 (764)
. ++..|++..-+|.+...++...|.+++.+|. ++++.+|+++|++++++. +..+.+|+
T Consensus 119 --~---------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~ 178 (397)
T 3fsl_A 119 --F---------------PESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTL---QAGSIVLL 178 (397)
T ss_dssp --C---------------TTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTC---CTTCEEEE
T ss_pred --C---------------CCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhC---CCCCEEEE
Confidence 1 1124778889999999999999999999998 467899999999999742 12356777
Q ss_pred EeeccCCcccc---ccHHHHHHHHHhcCCEEEEecccccccccc----chhhhhhcCCCcccEEEEcCCccCCCC-cCce
Q psy13453 690 ATLGTTGTCAF---DNLEELGPICQEYNIWLHVDAAYAGSALLL----PEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCS 761 (764)
Q Consensus 690 ataGTT~~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~----~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g 761 (764)
.+..++.+|.+ +++++|+++|++||+|+++|.+|+.+..-. ....... +...-.-+..+++|.++.| ..+|
T Consensus 179 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~~~G~riG 257 (397)
T 3fsl_A 179 HPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIA-SAGLPALVSNSFSKIFSLYGERVG 257 (397)
T ss_dssp CSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHH-HTTCCEEEEEECTTTTTCGGGCCE
T ss_pred eCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHH-hcCCCEEEEecccccccCcCCCee
Confidence 78889999998 778899999999999999999998755321 1111111 1222246677899988743 2345
Q ss_pred ee
Q psy13453 762 AM 763 (764)
Q Consensus 762 ~l 763 (764)
.+
T Consensus 258 ~~ 259 (397)
T 3fsl_A 258 GL 259 (397)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 144
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.27 E-value=4.6e-11 Score=132.51 Aligned_cols=173 Identities=16% Similarity=0.066 Sum_probs=120.8
Q ss_pred HHHHHHHhhcccCccccC-CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhc
Q psy13453 539 VGDMLSGAFGLIGFSWLS-SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQ 617 (764)
Q Consensus 539 lad~l~~~lN~n~~~~~~-sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~ 617 (764)
+.+.+...+... .|.. ++...++++ .+++++|.+ ..+||+|||+++..++.+.+ +
T Consensus 34 ~~~a~~~~~~~~--~y~~~~~~~~~l~~----~la~~~~~~-----------~v~~~~ggt~al~~~l~~l~----~--- 89 (424)
T 2po3_A 34 LYERLDRALDSQ--WLSNGGPLVREFEE----RVAGLAGVR-----------HAVATCNATAGLQLLAHAAG----L--- 89 (424)
T ss_dssp HHHHHHHHHHHT--CCSSSCHHHHHHHH----HHHHHHTSS-----------EEEEESCHHHHHHHHHHHHT----C---
T ss_pred HHHHHHHHHhcC--CcccCCHHHHHHHH----HHHHHhCCC-----------eEEEeCCHHHHHHHHHHHcC----C---
Confidence 334444444332 2333 444455554 556666653 47999999999998887652 1
Q ss_pred cCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCC-CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 618 SKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 618 ~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~-~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
+..|++++.+|.+...++...|+.++.+|+++ ++.+|+++|+++|++. +-+|+.+ +.
T Consensus 90 -------------gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~---~~ 147 (424)
T 2po3_A 90 -------------TGEVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTPR------TSAVVGV---HL 147 (424)
T ss_dssp -------------CSEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCCTT------EEEEEEE---CG
T ss_pred -------------CCEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhCcC------CcEEEEE---CC
Confidence 11478899999999999999999999999985 7889999999888542 3355543 36
Q ss_pred ccccccHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCC--ccCCCCcCceee
Q psy13453 697 TCAFDNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTH--KWLLVNFDCSAM 763 (764)
Q Consensus 697 ~GaiDpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~H--K~l~~P~~~g~l 763 (764)
+|..+++++|+++|++||+|+++|+||+.+..+.. +. +. ..+|-++.++| |+++. ..+|++
T Consensus 148 tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~--~~-~~--~~~di~~~S~sk~K~l~~-~~~G~~ 210 (424)
T 2po3_A 148 WGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDG--RP-AG--SLGDAEVFSFHATKAVNA-FEGGAV 210 (424)
T ss_dssp GGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETT--EE-TT--SSSSEEEEECCTTSSSCC-SSCEEE
T ss_pred CCCcCCHHHHHHHHHHcCCEEEEECccccCCeECC--ee-cc--cccCEEEEeCCCCCCccC-CCCeEE
Confidence 89999999999999999999999999994333321 11 11 12466666766 98875 555654
No 145
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.27 E-value=4e-11 Score=130.29 Aligned_cols=193 Identities=13% Similarity=0.084 Sum_probs=133.4
Q ss_pred HHHHHHHhhccc-CccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhc
Q psy13453 539 VGDMLSGAFGLI-GFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQ 617 (764)
Q Consensus 539 lad~l~~~lN~n-~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~ 617 (764)
+.+.+...+... ...|...+...++++.+.+|+.+.+|.+.+ .....+||+|+|+++..++.+...
T Consensus 43 v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~------~~~~v~~~~g~~~a~~~~~~~l~~------- 109 (376)
T 2dou_A 43 PLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLD------PRREALALIGSQEGLAHLLLALTE------- 109 (376)
T ss_dssp HHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCC------TTTSEEEESSHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCC------CCccEEEcCCcHHHHHHHHHHhcC-------
Confidence 344444444321 223333335678888888888888898621 012579999999999887765421
Q ss_pred cCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCc
Q psy13453 618 SKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGT 697 (764)
Q Consensus 618 ~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~ 697 (764)
++..|++..-+|.+...++...|.+++.+|.++.+.+|+++|+++|++. +-+|+.+..++.+
T Consensus 110 ------------~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~p~npt 171 (376)
T 2dou_A 110 ------------PEDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVWRE------AKVLLLNYPNNPT 171 (376)
T ss_dssp ------------TTCEEEEESSCCHHHHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHHHH------EEEEEECSSCTTT
T ss_pred ------------CCCEEEECCCCcHhHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHhhccC------ceEEEECCCCCCc
Confidence 1124777888999999999999999999998555579999999999643 3477777788889
Q ss_pred ccccc---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhc--CCCcccEEEEcCCccCCCC-cCceee
Q psy13453 698 CAFDN---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKR--GLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 698 GaiDp---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~--gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
|.+-| +++|+++|++||+|+++|.+|+.+..-. +....+. +....+-+..++||+++.| +.+|++
T Consensus 172 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 242 (376)
T 2dou_A 172 GAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEG-EAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFA 242 (376)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSS-CCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEE
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCcEEEEecchhhcCChhheeEEE
Confidence 98854 7889999999999999999998754321 1111111 1112366778999998744 345654
No 146
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.27 E-value=2.5e-11 Score=132.76 Aligned_cols=164 Identities=16% Similarity=0.031 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+++++++|.+. ...+||+|||+++..++.+++... + ++-+|+.+...|
T Consensus 87 ~~~~~l~~~la~~~~~~~---------~~v~~~~gg~~a~~~al~~~~~~~-~---------------~~~vi~~~~~y~ 141 (395)
T 1vef_A 87 PMRGEFYRTLTAILPPEL---------NRVFPVNSGTEANEAALKFARAHT-G---------------RKKFVAAMRGFS 141 (395)
T ss_dssp HHHHHHHHHHHHTSCTTE---------EEEEEESSHHHHHHHHHHHHHHHH-S---------------CCEEEEETTCCC
T ss_pred HHHHHHHHHHHHhcCCCc---------CEEEEcCcHHHHHHHHHHHHHHHh-C---------------CCeEEEEcCCcC
Confidence 456677788888887654 257999999999999998765321 1 123566666667
Q ss_pred hhHHHHHHhCCCc------------eEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc----HHH
Q psy13453 642 SSVEKSAIIGDVP------------VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN----LEE 705 (764)
Q Consensus 642 ~Sv~kAa~~lGl~------------v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp----l~e 705 (764)
.+...++...|.. +..+|. .|+++|+++|++. +.+|+++..++.+|.+.| +++
T Consensus 142 ~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~~~------~~~v~~~~~~~~tG~~~~~~~~l~~ 210 (395)
T 1vef_A 142 GRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-----NDVEALKRAVDEE------TAAVILEPVQGEGGVRPATPEFLRA 210 (395)
T ss_dssp CSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-----TCHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHH
T ss_pred CCchhhhhhcCCcccccccCCCCCCeeEeCC-----CcHHHHHHHhccC------EEEEEEeCccCCCCccCCCHHHHHH
Confidence 7777777777764 333332 4899999988632 457777766677998877 999
Q ss_pred HHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 706 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 706 Ia~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
|+++|++||+|||+|++|++.......+.....++ .+|.++ +||+++.++.+|+++
T Consensus 211 i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~-~~d~~s--~sK~~~~g~~~G~~~ 266 (395)
T 1vef_A 211 AREITQEKGALLILDEIQTGMGRTGKRFAFEHFGI-VPDILT--LAKALGGGVPLGVAV 266 (395)
T ss_dssp HHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEE--ECGGGGTTSSCEEEE
T ss_pred HHHHHHHcCCEEEEEecccCCccCCchhHhhhcCC-CCCEEE--EcccccCCCceEEEE
Confidence 99999999999999999996321111111122233 368764 599999888888763
No 147
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.27 E-value=3.4e-11 Score=134.27 Aligned_cols=152 Identities=11% Similarity=-0.001 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS 643 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S 643 (764)
-.++.+++++++|.+ ..++++||++|+..++.+.. . +...|+++..+|.+
T Consensus 83 ~~~l~~~la~~~g~~-----------~~~~~~sG~~Ai~~al~~l~----~---------------~Gd~Vi~~~~~y~~ 132 (414)
T 3ndn_A 83 VSVFEERLRLIEGAP-----------AAFATASGMAAVFTSLGALL----G---------------AGDRLVAARSLFGS 132 (414)
T ss_dssp HHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHTTC----C---------------TTCEEEEESCCCHH
T ss_pred HHHHHHHHHHHHCCC-----------cEEEECCHHHHHHHHHHHHh----C---------------CCCEEEEcCCccch
Confidence 344556778888763 36899999999887776431 0 12257788888988
Q ss_pred HHHHHHh----CCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEE
Q psy13453 644 VEKSAII----GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHV 719 (764)
Q Consensus 644 v~kAa~~----lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHV 719 (764)
...++.. .|+.++.||.+ |+++|+++|++. +-+|++...++.+|.+.|+++|+++|++||+++++
T Consensus 133 ~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~ai~~~------t~~v~le~p~NptG~~~~l~~i~~la~~~g~~liv 201 (414)
T 3ndn_A 133 CFVVCSEILPRWGVQTVFVDGD-----DLSQWERALSVP------TQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVL 201 (414)
T ss_dssp HHHHHHTHHHHTTCEEEEECTT-----CHHHHHHHTSSC------CSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHcCcEEEEeCCC-----CHHHHHHhcCCC------CeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEE
Confidence 7776644 89999999876 799999988653 34788889999999999999999999999999999
Q ss_pred eccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC--ceee
Q psy13453 720 DAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD--CSAM 763 (764)
Q Consensus 720 DaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~--~g~l 763 (764)
|.+|+.+....+. -.| +|.++.++||+++.+-. +|++
T Consensus 202 De~~~~~~~~~~~----~~g---~div~~S~sK~l~~~G~~~~G~v 240 (414)
T 3ndn_A 202 DNVFATPLLQQGF----PLG---VDVVVYSGTKHIDGQGRVLGGAI 240 (414)
T ss_dssp ECTTTHHHHCCCG----GGT---CSEEEEETTTTTTCSSCCCCEEE
T ss_pred ECCCcccccCCch----hcC---CCeEeccCCccccCCCCceEEEE
Confidence 9999865433321 123 59999999999976542 5654
No 148
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.27 E-value=5e-11 Score=131.29 Aligned_cols=152 Identities=15% Similarity=0.080 Sum_probs=115.8
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
.++.+++++++|.+. .+++++||++|..++.+... ++..|+++..+|.+.
T Consensus 107 ~~l~~~la~~~g~~~-----------~i~~~sGt~a~~~~l~~~~~-------------------~gd~Vl~~~~~~~~~ 156 (409)
T 3kki_A 107 PMIEKRLAKFTGFDE-----------CLLSQSGWNANVGLLQTICQ-------------------PNTNVYIDFFAHMSL 156 (409)
T ss_dssp CHHHHHHHHHHTCSE-----------EEEESCHHHHHHHHHHHHCC-------------------TTCEEEEETTSCHHH
T ss_pred HHHHHHHHHHhCCCe-----------EEEecchHHHHHHHHHHhcC-------------------CCCEEEECCCcCHHH
Confidence 445667888888754 47778889999888774321 123578899999999
Q ss_pred HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEecccc
Q psy13453 645 EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYA 724 (764)
Q Consensus 645 ~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~G 724 (764)
..++...|..++.++. +|+++|+++|++.. +.+|+.+..++.+|.+.|+++|+++|++||+||++|.+|+
T Consensus 157 ~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~-----~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~ 226 (409)
T 3kki_A 157 WEGARYANAQAHPFMH-----NNCDHLRMLIQRHG-----PGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHS 226 (409)
T ss_dssp HHHHHHTTCEEEEECT-----TCHHHHHHHHHHHC-----SCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTT
T ss_pred HHHHHHcCCeEEEecC-----CCHHHHHHHHHhcC-----CeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCcc
Confidence 9999999998877764 68999999998642 3478888888899999999999999999999999999998
Q ss_pred cccccc--chhhhhhcCC-CcccEEEEcCCccCCCC
Q psy13453 725 GSALLL--PEYAHLKRGL-EYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 725 g~~l~~--~~~r~~l~gi-e~aDSit~d~HK~l~~P 757 (764)
++.+-- ...... .++ ..+|.++.++||+++.+
T Consensus 227 ~g~~g~~g~~~~~~-~~~~~~~di~~~s~sK~~~~~ 261 (409)
T 3kki_A 227 LGTHGPNGAGLLAE-LGLTREVHFMTASLAKTFAYR 261 (409)
T ss_dssp TTTSSGGGCCHHHH-HTCGGGCSEEEEESSSTTCSS
T ss_pred ccccCCCCCcchhh-cCCCCCCCEEEeecchhhCCC
Confidence 754311 001111 122 35699999999999876
No 149
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.27 E-value=9.8e-11 Score=131.52 Aligned_cols=197 Identities=17% Similarity=0.114 Sum_probs=135.2
Q ss_pred HHHHHHHHHhhccc---CccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHh
Q psy13453 537 SIVGDMLSGAFGLI---GFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMI 613 (764)
Q Consensus 537 ~~lad~l~~~lN~n---~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~ 613 (764)
..+.+.+...+... ...|.......++++.+.+++.+..|.+ + ....++|+|+|+++..++.+..+
T Consensus 94 ~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~-------~~~v~~t~G~~~al~~~~~~l~~--- 162 (448)
T 3aow_A 94 EIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGIS-Q-------DNDIMITSGSQQALDLIGRVFLN--- 162 (448)
T ss_dssp HHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCC-T-------TSEEEEESSHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcC-C-------hhhEEEeCcHHHHHHHHHHHHcC---
Confidence 33444444444321 2344444566788888888888888884 2 13689999999998887765421
Q ss_pred hhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEE-EEee
Q psy13453 614 NHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCL-IATL 692 (764)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~V-vata 692 (764)
++..|++.+-+|.+...++...|.+++.||.|++| +|+++|+++|+.+..++..+-+| +...
T Consensus 163 ----------------~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~L~~~l~~~~~~~~~~k~v~~~~~ 225 (448)
T 3aow_A 163 ----------------PGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDEG-MKVEILEEKLKELKSQGKKVKVVYTVPT 225 (448)
T ss_dssp ----------------TTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred ----------------CCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCCC-CCHHHHHHHHhhhhccCCCCeEEEECCC
Confidence 11257788889999999999999999999998776 99999999997432222245555 4567
Q ss_pred ccCCcccccc---HHHHHHHHHhcCCEEEEeccccccccccc---hhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 693 GTTGTCAFDN---LEELGPICQEYNIWLHVDAAYAGSALLLP---EYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 693 GTT~~GaiDp---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~---~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+++.+|.+-+ +++|+++|++||+|+++|.+|+.+..-.. .... ++ -...+-...+++|+++.-+-+|++
T Consensus 226 ~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~-~~-~~~~vi~~~S~SK~~~~GlriG~v 300 (448)
T 3aow_A 226 FQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKA-LD-NEGRVIYLGTFSKILAPGFRIGWM 300 (448)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGG-GC-TTSCEEEEEESTTTTCGGGCCEEE
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHh-cC-CCCCEEEEccchhhccccccEEEE
Confidence 7888998854 67899999999999999999988543111 1111 11 112356778899999822235665
No 150
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.26 E-value=3e-11 Score=135.50 Aligned_cols=150 Identities=20% Similarity=0.141 Sum_probs=116.6
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|...++| +++++++|.+. .+++++|++|+..++.+.. . ++..|+
T Consensus 80 ~~p~~~~le----~~lA~l~g~~~-----------~v~~~sG~~Ai~~al~al~----~---------------~Gd~Vi 125 (430)
T 3ri6_A 80 SNPTVEDLE----QRLKNLTGALG-----------VLALGSGMAAISTAILTLA----R---------------AGDSVV 125 (430)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----------EEEESCHHHHHHHHHHHHC----C---------------TTCEEE
T ss_pred CCHHHHHHH----HHHHHHHCCCc-----------EEEECCHHHHHHHHHHHHh----C---------------CCCEEE
Confidence 345555555 46777877643 5788899999888776541 1 122578
Q ss_pred ecCCcchhHHH----HHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSSVEK----SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~Sv~k----Aa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
+++.+|.+... .+...|+.++.|+.+ |+++|+++|++. +-+|+....++.+|.+.|+++|+++|+
T Consensus 126 ~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~-----d~~~l~~ai~~~------t~~v~~e~p~NptG~~~dl~~i~~la~ 194 (430)
T 3ri6_A 126 TTDRLFGHTLSLFQKTLPSFGIEVRFVDVM-----DSLAVEHACDET------TKLLFLETISNPQLQVADLEALSKVVH 194 (430)
T ss_dssp EETTCCHHHHHHHHTHHHHTTCEEEEECTT-----CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred EcCCCchhHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHhhCCC------CeEEEEECCCCCCCeecCHHHHHHHHH
Confidence 88999988777 566789999999876 899999998653 448888889999999999999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
++|++++||.+|+.+.+..+. -.| +|.++.++||+++.|
T Consensus 195 ~~g~~livD~a~~~~~~~~~~----~~g---~div~~S~sK~l~g~ 233 (430)
T 3ri6_A 195 AKGIPLVVDTTMTPPYLLEAK----RLG---VDIEVLSSTKFISGG 233 (430)
T ss_dssp TTTCCEEEECTTSCTTTCCGG----GGT---CSEEEEECCCEEETT
T ss_pred HcCCEEEEECCCcccccCChH----HcC---CEEEEECCcccccCC
Confidence 999999999999876553332 123 599999999999876
No 151
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.26 E-value=1.2e-11 Score=135.91 Aligned_cols=159 Identities=12% Similarity=-0.003 Sum_probs=113.6
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEE-eCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGII-QSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVA 634 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~Gvf-TsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi 634 (764)
.+|....+.+++.+++++++|.++. ...+| |+|||+++..++.+.. . ++ ++
T Consensus 72 ~~~~~~~~~~~~~~~la~~~g~~~~--------~~i~~~t~g~t~al~~~~~~l~----~---------------~g-v~ 123 (398)
T 2fyf_A 72 RQAPVKNLVGRVRSGLAELFSLPDG--------YEVILGNGGATAFWDAAAFGLI----D---------------KR-SL 123 (398)
T ss_dssp TSHHHHHHHHHHHHHHHHHTTCCTT--------CEEEEEETCHHHHHHHHHHHTC----S---------------SC-EE
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCC--------ceEEEeCCchhHHHHHHHHHhc----C---------------CC-eE
Confidence 4677777888999999999999741 25778 9999999988876541 0 12 23
Q ss_pred EecCCcchh-HHHHHHhC--CCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 635 YTSDQSNSS-VEKSAIIG--DVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 635 ~~S~~aH~S-v~kAa~~l--Gl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
+++...|.. ..+.+... |..++.||++ +|.++..+ + ...+-+|+++..+|.+|.+.|+++|.++
T Consensus 124 ~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~g~~~~~~----i------~~~~~~v~~~~~~nptG~~~~~~~i~~~-- 190 (398)
T 2fyf_A 124 HLTYGEFSAKFASAVSKNPFVGEPIIITSD-PGSAPEPQ----T------DPSVDVIAWAHNETSTGVAVAVRRPEGS-- 190 (398)
T ss_dssp EEECSHHHHHHHHHHHHCTTSCCCEEEECC-TTCCCCCC----C------CTTCSEEEEESEETTTTEECCCCCCTTC--
T ss_pred EEeCCHHHHHHHHHHHHhCCCCceEEEecC-CCCCCCcc----c------cCCCCEEEEeCcCCCcceecchHHhhhh--
Confidence 346666643 23345555 7888999988 45443221 2 1235688888899999999999999887
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+|+|+|+|+||+.+....+ ++.+|.++.++||+++.|.++|+++
T Consensus 191 -~~~~vivD~a~~~~~~~~~--------~~~~di~~~s~sK~~~~~gg~g~l~ 234 (398)
T 2fyf_A 191 -DDALVVIDATSGAGGLPVD--------IAETDAYYFAPQKNFASDGGLWLAI 234 (398)
T ss_dssp -C-CEEEEECTTTTTTSCCC--------GGGCSEEEECTTSTTCSCSSEEEEE
T ss_pred -cCCeEEEEeccccCCcccC--------cccCcEEEEecCcccCCCCceEEEE
Confidence 8999999999987653321 2236999999999999886787653
No 152
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.26 E-value=4.6e-11 Score=129.35 Aligned_cols=166 Identities=9% Similarity=-0.034 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
.++++.+.+++.+.+|.+.+ ....+||+|||+++..++.+... ++..|++...+
T Consensus 61 ~~lr~~la~~~~~~~~~~~~-------~~~i~~t~g~~~a~~~~~~~~~~-------------------~gd~vl~~~~~ 114 (377)
T 3fdb_A 61 SLLSQATAEFYADRYGYQAR-------PEWIFPIPDVVRGLYIAIDHFTP-------------------AQSKVIVPTPA 114 (377)
T ss_dssp CCHHHHHHHHHHHHHCCCCC-------GGGEEEESCHHHHHHHHHHHHSC-------------------TTCCEEEEESC
T ss_pred HHHHHHHHHHHHHHhCCCCC-------HHHEEEeCChHHHHHHHHHHhcC-------------------CCCEEEEcCCC
Confidence 67888888999988886532 24689999999999887765421 11246778889
Q ss_pred chhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc---cHHHHHHHHHhcCCEE
Q psy13453 641 NSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD---NLEELGPICQEYNIWL 717 (764)
Q Consensus 641 H~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD---pl~eIa~i~~~~glwL 717 (764)
|.++..++...|.+++.+|.+++ +|+++|+++|++. +.+|+.+..++.+|.+- ++++|+++|++||+++
T Consensus 115 ~~~~~~~~~~~g~~~~~~~~~~~--~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~l 186 (377)
T 3fdb_A 115 YPPFFHLLSATQREGIFIDATGG--INLHDVEKGFQAG------ARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARV 186 (377)
T ss_dssp CTHHHHHHHHHTCCEEEEECTTS--CCHHHHHHHHHTT------CCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEE
T ss_pred cHhHHHHHHHcCCEEEEccCCCC--CCHHHHHHHhccC------CCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 99999999999999999999876 9999999999764 33777788899999985 5777888899999999
Q ss_pred EEecccccccccc-chhhhhhcCC--CcccEEEEcCCccCCCC-cCce
Q psy13453 718 HVDAAYAGSALLL-PEYAHLKRGL--EYVDSFDFNTHKWLLVN-FDCS 761 (764)
Q Consensus 718 HVDaA~Gg~~l~~-~~~r~~l~gi--e~aDSit~d~HK~l~~P-~~~g 761 (764)
++|.+|+.+..-. .... .+..+ ...+-+..++||+++.| ..+|
T Consensus 187 i~De~~~~~~~~g~~~~~-~~~~~~~~~~~i~~~s~sK~~g~~G~r~G 233 (377)
T 3fdb_A 187 LVDEIHAPLVFDGQHTVA-AGVSDTAASVCITITAPSKAWNIAGLKCA 233 (377)
T ss_dssp EEECTTGGGBSSSCCCCG-GGSCHHHHHHEEEEECSTTTTTCGGGCCE
T ss_pred EEEcccchhhcCCCCCcc-cHHHccCCCcEEEEEeChHhccCcchhhe
Confidence 9999998844322 1111 11111 11246678999999643 4455
No 153
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.26 E-value=1.5e-10 Score=125.30 Aligned_cols=194 Identities=9% Similarity=-0.071 Sum_probs=134.2
Q ss_pred HHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhc
Q psy13453 538 IVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQ 617 (764)
Q Consensus 538 ~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~ 617 (764)
.+.+.+...+ .....|.......++.+.+.+|+.+.+|.+-+ ....+||+|||+++..++.+... + .
T Consensus 40 ~v~~a~~~~~-~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~-------~~~i~~t~g~~~al~~~~~~~~~---~-~- 106 (376)
T 3ezs_A 40 FIQDALKNHT-HSLNIYPKSAFEESLRAAQRGFFKRRFKIELK-------ENELISTLGSREVLFNFPSFVLF---D-Y- 106 (376)
T ss_dssp HHHHHHHTTG-GGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCC-------GGGEEEESSSHHHHHHHHHHHTT---T-C-
T ss_pred HHHHHHHHhh-hhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-------HHHEEECcCcHHHHHHHHHHHcC---C-C-
Confidence 3444454444 22333444444678999999999999997321 13689999999999888775421 0 0
Q ss_pred cCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCc
Q psy13453 618 SKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGT 697 (764)
Q Consensus 618 ~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~ 697 (764)
++..|++..-+|.++..++...|.+++.+|.++++.+++ +|++++.+. +-+|+.+..++.+
T Consensus 107 ------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~l~~~~~~~------~~~v~~~~p~npt 167 (376)
T 3ezs_A 107 ------------QNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP-SLNEKELQE------VDLVILNSPNNPT 167 (376)
T ss_dssp ------------SSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC-CCCHHHHHH------CSEEEECSSCTTT
T ss_pred ------------CCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch-hHHhhhccC------CCEEEEcCCCCCc
Confidence 012577888999999999999999999999987666666 788888764 3377777889999
Q ss_pred ccccc---HHHHHHHHHhcCCEEEEeccccccccccch--hhhhhc--C--CCcccEEEEcCCccCC-CCcCceee
Q psy13453 698 CAFDN---LEELGPICQEYNIWLHVDAAYAGSALLLPE--YAHLKR--G--LEYVDSFDFNTHKWLL-VNFDCSAM 763 (764)
Q Consensus 698 GaiDp---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~--~r~~l~--g--ie~aDSit~d~HK~l~-~P~~~g~l 763 (764)
|.+-+ +++|+++|++||+|+++|.+|+.+..-... ...... + -...+-+..++||+++ ....+|.+
T Consensus 168 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~ 243 (376)
T 3ezs_A 168 GRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFI 243 (376)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEE
Confidence 99855 777888899999999999999985432110 111100 0 1234678889999996 34455654
No 154
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.26 E-value=7.1e-11 Score=127.61 Aligned_cols=161 Identities=14% Similarity=-0.026 Sum_probs=120.3
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
++.+++++++|.+.+ ..+||+|||+++..++.+.. . +...|+++..+|.++.
T Consensus 69 ~lr~~la~~~~~~~~---------~v~~~~g~~~a~~~~~~~l~----~---------------~gd~vl~~~~~~~~~~ 120 (365)
T 3get_A 69 ELKSTLAQKYKVQNE---------NIIIGAGSDQVIEFAIHSKL----N---------------SKNAFLQAGVTFAMYE 120 (365)
T ss_dssp HHHHHHHHHHTCCGG---------GEEEESSHHHHHHHHHHHHC----C---------------TTCEEEECSSCCTHHH
T ss_pred HHHHHHHHHhCCCcc---------eEEECCCHHHHHHHHHHHHh----C---------------CCCEEEEeCCChHHHH
Confidence 456677888887653 68999999999888776431 1 1225778889999999
Q ss_pred HHHHhCCCceEEEec-CCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH--hcCCEEEEecc
Q psy13453 646 KSAIIGDVPVRQLRS-DDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ--EYNIWLHVDAA 722 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~-d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~--~~glwLHVDaA 722 (764)
.++...|.+++.+|+ ++++ +|+++|+++++++ +-+|+.+..++.+|.+-|++++.++|+ ++|+|+++|.+
T Consensus 121 ~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~ 193 (365)
T 3get_A 121 IYAKQCGAKCYKTQSITHNL-DEFKKLYETHKDE------IKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAA 193 (365)
T ss_dssp HHHHHHTCEEEECSSSSCCH-HHHHHHHHHTTTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECT
T ss_pred HHHHHcCCEEEEEecCCCCC-CCHHHHHHHhCCC------CCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCc
Confidence 999999999999998 6788 9999999998643 447777889999999999999888888 77999999999
Q ss_pred cccccc--c----cchhhhhhcCCCcccEEEEcCCccCC-CCcCceee
Q psy13453 723 YAGSAL--L----LPEYAHLKRGLEYVDSFDFNTHKWLL-VNFDCSAM 763 (764)
Q Consensus 723 ~Gg~~l--~----~~~~r~~l~gie~aDSit~d~HK~l~-~P~~~g~l 763 (764)
|+.+.. . .+.. .... ....+-+..++||+++ ....+|.+
T Consensus 194 ~~~~~~~~~~~~~~~~~-~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~ 239 (365)
T 3get_A 194 YNEFASFKDSKKHLEPC-ELIK-EFDNVLYLGTFSKLYGLGGLRIGYG 239 (365)
T ss_dssp THHHHHHHCGGGCCCHH-HHHH-HCTTEEEEEESSSTTSCTTTCCEEE
T ss_pred cHHHhcccCCcccccHh-HHhc-cCCCEEEEeecchHhcCcchheEEE
Confidence 986542 1 1111 1111 1123577889999987 34456654
No 155
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.26 E-value=1.7e-11 Score=137.30 Aligned_cols=195 Identities=10% Similarity=0.026 Sum_probs=137.8
Q ss_pred HHHHHHHHHhhcc-cCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhh
Q psy13453 537 SIVGDMLSGAFGL-IGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINH 615 (764)
Q Consensus 537 ~~lad~l~~~lN~-n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~ 615 (764)
..+.+.+...+.. ....|.......++++.+.+|+.+.+|.+.+ ....++|+|||+++..++.+..+
T Consensus 73 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~-------~~~v~~t~G~~~al~~~~~~l~~----- 140 (447)
T 3b46_A 73 QFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELK-------AENVTVTTGANEGILSCLMGLLN----- 140 (447)
T ss_dssp HHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCC-------GGGEEEESHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCC-------hhhEEEeCCHHHHHHHHHHHHcC-----
Confidence 3444555555543 2233444445678899999999888886432 13689999999999888776421
Q ss_pred hccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCC------------CCcccHHHHHHHHHHhhhcCC
Q psy13453 616 WQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD------------NGVLRGDALLTAVKEDLAKGL 683 (764)
Q Consensus 616 ~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~------------~g~md~~~Le~~I~~~~~~G~ 683 (764)
++..|++.+-+|.+...++...|.+++.||.+. ++.+|+++|+++|++.
T Consensus 141 --------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~----- 201 (447)
T 3b46_A 141 --------------AGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSK----- 201 (447)
T ss_dssp --------------TTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTT-----
T ss_pred --------------CCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccC-----
Confidence 112477778889999999999999999999864 4689999999988532
Q ss_pred CceEEEEeeccCCcccc---ccHHHHHHHHHhcCCEEEEeccccccccccc--hhhhhhcCCCcccEEEEcCCccCCCC-
Q psy13453 684 IPCCLIATLGTTGTCAF---DNLEELGPICQEYNIWLHVDAAYAGSALLLP--EYAHLKRGLEYVDSFDFNTHKWLLVN- 757 (764)
Q Consensus 684 ~p~~VvataGTT~~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~--~~r~~l~gie~aDSit~d~HK~l~~P- 757 (764)
+-+|+++..++.+|.+ +++++|+++|++||+|+++|.+|+....-.+ .....-.+....|-+..++||+++.|
T Consensus 202 -~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G 280 (447)
T 3b46_A 202 -TKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATG 280 (447)
T ss_dssp -EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTT
T ss_pred -CeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcc
Confidence 4477778889999998 6899999999999999999999987443111 11111011123488999999998743
Q ss_pred cCceee
Q psy13453 758 FDCSAM 763 (764)
Q Consensus 758 ~~~g~l 763 (764)
+-+|++
T Consensus 281 ~riG~~ 286 (447)
T 3b46_A 281 WRIGWV 286 (447)
T ss_dssp SCCEEE
T ss_pred hhhEEE
Confidence 336654
No 156
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.26 E-value=2.3e-11 Score=131.97 Aligned_cols=171 Identities=12% Similarity=0.022 Sum_probs=122.6
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 552 FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 552 ~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
..|...+...++++.+.+|+. +.++ ...++|+|||+++..++.+.. . ++
T Consensus 57 ~~y~~~~g~~~l~~~la~~~~---~~~~---------~~v~~~~g~~~a~~~~~~~l~----~---------------~g 105 (375)
T 3op7_A 57 LNYGWIEGSPAFKKSVSQLYT---GVKP---------EQILQTNGATGANLLVLYSLI----E---------------PG 105 (375)
T ss_dssp CSSCCTTCCHHHHHHHHTTSS---SCCG---------GGEEEESHHHHHHHHHHHHHC----C---------------TT
T ss_pred cCCCCCCChHHHHHHHHHHhc---cCCh---------hhEEEcCChHHHHHHHHHHhc----C---------------CC
Confidence 344444445566665554432 3433 368999999999988876541 1 12
Q ss_pred eEEEecCCcchhHHHHHHhCCCceEEEecC--CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHH
Q psy13453 632 LVAYTSDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEEL 706 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d--~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eI 706 (764)
..|++...+|.+...++...|.+++.+|++ ..+.+|+++|++++++. +-+|+.+..++.+|.+-| +++|
T Consensus 106 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~l~~i 179 (375)
T 3op7_A 106 DHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPT------TKMICINNANNPTGAVMDRTYLEEL 179 (375)
T ss_dssp CEEEEEESSCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTT------CCEEEEESSCTTTCCCCCHHHHHHH
T ss_pred CEEEEeCCCchhHHHHHHHcCCEEEEEeccccCCCCCCHHHHHHhhccC------CeEEEEcCCCCCCCCCCCHHHHHHH
Confidence 257788899999999999999999999987 34569999999998643 447777888899999999 9999
Q ss_pred HHHHHhcCCEEEEeccccccccc-cchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 707 GPICQEYNIWLHVDAAYAGSALL-LPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 707 a~i~~~~glwLHVDaA~Gg~~l~-~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+++|++||+|+++|.+|+.+..- .+.... .. ..+-+..+++|.++.| ..+|++
T Consensus 180 ~~la~~~~~~li~De~~~~~~~~~~~~~~~-~~---~~~i~~~s~sK~~~~~G~r~G~v 234 (375)
T 3op7_A 180 VEIASEVGAYILSDEVYRSFSELDVPSIIE-VY---DKGIAVNSLSKTYSLPGIRIGWV 234 (375)
T ss_dssp HHHHHTTTCEEEEECCSCCCSSSCCCCHHH-HC---TTEEEEEESSSSSSCGGGCCEEE
T ss_pred HHHHHHcCCEEEEEcccccccccCCCchhh-hc---CCEEEEeEChhhcCCcccceEEE
Confidence 99999999999999999875432 111111 11 2256788999999744 445554
No 157
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.25 E-value=5.1e-11 Score=128.21 Aligned_cols=159 Identities=13% Similarity=-0.008 Sum_probs=117.4
Q ss_pred HHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 565 VLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 565 ~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
.++.+++++++|.++ ...+||+|||+++..++.++ ..|+++..+|.++
T Consensus 64 ~~l~~~la~~~~~~~---------~~i~~~~g~t~al~~~~~~~-----------------------d~vi~~~~~~~~~ 111 (361)
T 3ftb_A 64 RRLNKSIENYLKLKD---------IGIVLGNGASEIIELSISLF-----------------------EKILIIVPSYAEY 111 (361)
T ss_dssp HHHHHHHHHHHTCCS---------CEEEEESSHHHHHHHHHTTC-----------------------SEEEEEESCCTHH
T ss_pred HHHHHHHHHHhCCCc---------ceEEEcCCHHHHHHHHHHHc-----------------------CcEEEecCChHHH
Confidence 445667777778754 35789999999998887643 1367788899999
Q ss_pred HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc---cHHHHHHHHHhcCCEEEEec
Q psy13453 645 EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD---NLEELGPICQEYNIWLHVDA 721 (764)
Q Consensus 645 ~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD---pl~eIa~i~~~~glwLHVDa 721 (764)
..++...|.+++.+|.++++.+++++|++++++ +-+|+.+..++.+|.+- ++++|+++|++||+++++|.
T Consensus 112 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~-------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 184 (361)
T 3ftb_A 112 EINAKKHGVSVVFSYLDENMCIDYEDIISKIDD-------VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDE 184 (361)
T ss_dssp HHHHHHTTCEEEEEECCTTSCCCHHHHHHHTTT-------CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHcCCeEEEeecCcccCCCHHHHHHhccC-------CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEEC
Confidence 999999999999999998889999999988865 33777888899999885 47778888889999999999
Q ss_pred cccccccccchhh-hhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 722 AYAGSALLLPEYA-HLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 722 A~Gg~~l~~~~~r-~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+|+.+..- .... ....+.....-+..++||.++.| ..+|.+
T Consensus 185 ~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~ 227 (361)
T 3ftb_A 185 AFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYG 227 (361)
T ss_dssp SSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEE
T ss_pred cchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEE
Confidence 99875542 1100 01111112235567999998743 445553
No 158
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.25 E-value=3.3e-11 Score=135.10 Aligned_cols=148 Identities=9% Similarity=0.004 Sum_probs=110.4
Q ss_pred HHHHHHcCCCccccCCCCCCCcEEE---eCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecC-CcchhH
Q psy13453 569 NWLGKALGLPEEFLNCSPGPGGGII---QSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSD-QSNSSV 644 (764)
Q Consensus 569 ~~la~llG~p~~~~~~~~~~~~Gvf---TsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~-~aH~Sv 644 (764)
+.+++++|.+. .++ +++||+||..++.+.. . +...|++++ ..|...
T Consensus 80 ~~lA~l~g~e~-----------alv~p~~~sGt~Ai~~al~all----~---------------pGD~Vl~~~~~~y~~~ 129 (427)
T 3i16_A 80 AVYARVFNTES-----------ALVRPHFVNGTHALGAALFGNL----R---------------PGNTMLSVCGEPYDTL 129 (427)
T ss_dssp HHHHHHHTCSE-----------EEEETTCCSHHHHHHHHHHHHC----C---------------TTCEEEESSSSCCGGG
T ss_pred HHHHHHhCCcc-----------eEEeCCCccHHHHHHHHHHHHh----C---------------CCCEEEEeCCCccHHH
Confidence 46888998754 255 8999999987776431 1 122466666 566544
Q ss_pred H-----------HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEee----ccCCccccccHHHHHHH
Q psy13453 645 E-----------KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATL----GTTGTCAFDNLEELGPI 709 (764)
Q Consensus 645 ~-----------kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~Vvata----GTT~~GaiDpl~eIa~i 709 (764)
. +.+...|++++.+|.+++|.+|+++|+++|++. ..+-+|+++. .++.+|.+.|+++|+++
T Consensus 130 ~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~----~~tklV~i~~s~~~p~nptg~i~dl~~i~~l 205 (427)
T 3i16_A 130 HDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKED----ESITLVHIQRSTGYGWRRALLIEDIKSIVDC 205 (427)
T ss_dssp HHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTC----TTEEEEEEECSCCSSSSCCCCHHHHHHHHHH
T ss_pred HHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCC----CCCEEEEEEcCCCCCCCCcccHHHHHHHHHH
Confidence 4 344556889999999989999999999999731 1244777766 78899999999999999
Q ss_pred HHh--cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC
Q psy13453 710 CQE--YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 710 ~~~--~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~ 756 (764)
|++ +|+|+|||.||+.+........ . .+|.++.++||+++.
T Consensus 206 a~~~~~g~~livD~a~~~~~~~~~p~~---~---gaDiv~~S~sK~lgg 248 (427)
T 3i16_A 206 VKNIRKDIICFVDNCYGEFMDTKEPTD---V---GADLIAGSLIKNIGG 248 (427)
T ss_dssp HHHHCTTSEEEEECTTTTTSSSSCGGG---G---TCSEEEEETTSGGGT
T ss_pred HHHhCCCCEEEEECCCccccccCCccc---c---CCeEEEecCcccCCC
Confidence 999 9999999999987653221111 1 369999999999986
No 159
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.25 E-value=3.8e-11 Score=132.24 Aligned_cols=177 Identities=15% Similarity=0.088 Sum_probs=124.4
Q ss_pred ccCCchHHHHHHHHHHHHHHHc------CCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCcccc
Q psy13453 554 WLSSPACTELEVLVMNWLGKAL------GLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTEND 627 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~ll------G~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~ 627 (764)
|.......++++.+.+|+.+.+ |++- .....++|+|||+++..++.+.. .
T Consensus 71 y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~-------~~~~v~~~~g~~~al~~~~~~l~----~------------- 126 (416)
T 1bw0_A 71 YFPTVGSPEAREAVATWWRNSFVHKEELKSTI-------VKDNVVLCSGGSHGILMAITAIC----D------------- 126 (416)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGC-------CGGGEEEESHHHHHHHHHHHHHC----C-------------
T ss_pred cCCCCCCHHHHHHHHHHHHhhhcccccCCCCC-------CcceEEEeCChHHHHHHHHHHhC----C-------------
Confidence 4333456778888888887533 3221 11368999999999888776541 1
Q ss_pred ccCceEEEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---
Q psy13453 628 IRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN--- 702 (764)
Q Consensus 628 ~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp--- 702 (764)
++..|+++.-+|.++..++...|.+++.+|.++ .+.+|+++|++++++. +.+|+.+..++.+|.+-|
T Consensus 127 --~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~~ 198 (416)
T 1bw0_A 127 --AGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDK------TKLLIVTNPSNPCGSNFSRKH 198 (416)
T ss_dssp --TTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHH
T ss_pred --CCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccC------CeEEEEeCCCCCCCcccCHHH
Confidence 112577788889999999999999999999864 3679999999988642 336666778889999988
Q ss_pred HHHHHHHHHhcCCEEEEeccccccccccch----hhhhhcCCCc-c-cEEEEcCCccCCCC-cCceee
Q psy13453 703 LEELGPICQEYNIWLHVDAAYAGSALLLPE----YAHLKRGLEY-V-DSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 703 l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~----~r~~l~gie~-a-DSit~d~HK~l~~P-~~~g~l 763 (764)
+++|+++|++||+|+++|.+|+.+.. ..+ ....+.++.. . +-+..++||+++.| +.+|++
T Consensus 199 l~~i~~~~~~~~~~li~De~~~~~~~-~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~ 265 (416)
T 1bw0_A 199 VEDIVRLAEELRLPLFSDEIYAGMVF-KGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWL 265 (416)
T ss_dssp HHHHHHHHHHHTCCEEEECTTTTCBC-CSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEE
T ss_pred HHHHHHHHHHcCCEEEEEcccccccc-CCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEE
Confidence 99999999999999999999998432 211 0111222221 1 34567999998766 345554
No 160
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.25 E-value=4.1e-11 Score=132.18 Aligned_cols=178 Identities=7% Similarity=-0.014 Sum_probs=129.3
Q ss_pred ccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceE
Q psy13453 554 WLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLV 633 (764)
Q Consensus 554 ~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~v 633 (764)
|...+...++++.+.+|+.+.+|.+.+ .....+||+|+|+++..++.+... ++..
T Consensus 81 y~~~~g~~~lr~~ia~~~~~~~g~~~~------~~~~v~~t~G~~~al~~~~~~l~~-------------------~gd~ 135 (404)
T 2o1b_A 81 YGAFHGKEAFKQAIVDFYQRQYNVTLD------KEDEVCILYGTKNGLVAVPTCVIN-------------------PGDY 135 (404)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCCCC------TTTSEEEESSHHHHHHHHHHHHCC-------------------TTCE
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCC------CcccEEEcCCcHHHHHHHHHHhcC-------------------CCCE
Confidence 444446678999999999998897521 002579999999999888775421 1124
Q ss_pred EEecCCcchhHHHHHHhCCCceEEEecCC-CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc---cHHHHHHH
Q psy13453 634 AYTSDQSNSSVEKSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD---NLEELGPI 709 (764)
Q Consensus 634 i~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~-~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD---pl~eIa~i 709 (764)
|++..-+|.+...++...|.+++.+|.++ .+.+|+++|++++++. +-+|+.+..++.+|.+- ++++|+++
T Consensus 136 Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~ 209 (404)
T 2o1b_A 136 VLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIIDK------TKLIYLTYPNNPTGSTATKEVFDEAIAK 209 (404)
T ss_dssp EEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHH------EEEEEECSSCTTTCCCCCHHHHHHHHHH
T ss_pred EEEcCCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhccC------ceEEEEcCCCCCCCccCCHHHHHHHHHH
Confidence 77788889999999999999999999986 3468999999999654 33677777888899885 58899999
Q ss_pred HHhcCCEEEEeccccccccccchhhhh--hcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 710 CQEYNIWLHVDAAYAGSALLLPEYAHL--KRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 710 ~~~~glwLHVDaA~Gg~~l~~~~~r~~--l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
|++||+|+++|.+|+.+..-. +.... +.+....|-+..++||+++.| +.+|++
T Consensus 210 ~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~ 265 (404)
T 2o1b_A 210 FKGTDTKIVHDFAYGAFGFDA-KNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFA 265 (404)
T ss_dssp HTTSSCEEEEECTTTTCBSSS-CCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEE
T ss_pred HHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCCEEEEEecchhccCchhheEeE
Confidence 999999999999998754311 11111 111112467889999999754 346665
No 161
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.25 E-value=1.9e-11 Score=132.18 Aligned_cols=158 Identities=14% Similarity=-0.029 Sum_probs=111.7
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcE-EEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGG-IIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVA 634 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~G-vfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi 634 (764)
.+|....+.+++.+++++++|.+++ ... ++|+|||+++..++.+.. .. +..|
T Consensus 43 ~~~~~~~~~~~~~~~la~~~g~~~~--------~~~i~~t~g~t~a~~~~~~~l~----~~---------------gd~v 95 (362)
T 2c0r_A 43 RGAVYEAVHNEAQARLLALLGNPTG--------YKVLFIQGGASTQFAMIPMNFL----KE---------------GQTA 95 (362)
T ss_dssp TSHHHHHHHHHHHHHHHHHTTCCSS--------EEEEEESSHHHHHHHHHHHHHC----CT---------------TCEE
T ss_pred CcHHHHHHHHHHHHHHHHHhCCCCC--------cEEEEECCCchHHHHHHHHhcC----CC---------------CCeE
Confidence 3566777888999999999999752 133 578999999887776431 10 1134
Q ss_pred EecCCcchh--HHHHHHhCCCceEEEecCC---CC-cccHHHHHHHHHHhhhcCCCceEEEEeeccCCccc-cccHHHHH
Q psy13453 635 YTSDQSNSS--VEKSAIIGDVPVRQLRSDD---NG-VLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCA-FDNLEELG 707 (764)
Q Consensus 635 ~~S~~aH~S--v~kAa~~lGl~v~~Vp~d~---~g-~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Ga-iDpl~eIa 707 (764)
++....|++ +...++..| +++.||++. .+ .+|.++++ |.+ .+-+|+++..+|.+|. ++|+++|
T Consensus 96 l~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~------~t~~v~~~~~~n~tG~~~~~l~~i- 165 (362)
T 2c0r_A 96 NYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQD------NAAYLHLTSNETIEGAQFKAFPDT- 165 (362)
T ss_dssp EEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCT------TEEEEEEESEETTTTEECSSCCCC-
T ss_pred EEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCC------CcCEEEEeCCcCccceeccccccc-
Confidence 444455665 345667779 999999872 22 35666553 322 3568888888999999 5888887
Q ss_pred HHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 708 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 708 ~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
+|+|+|||+||+.+....+ ++..|.++.++|||++ |.|+|+++
T Consensus 166 -----~~~~vivD~a~~~~~~~~~--------~~~~d~~~~s~~K~~g-~~G~G~l~ 208 (362)
T 2c0r_A 166 -----GSVPLIGDMSSDILSRPFD--------LNQFGLVYAGAQKNLG-PSGVTVVI 208 (362)
T ss_dssp -----TTSCEEEECTTTTTSSCCC--------GGGCSEEEEETTTTTC-CSSCEEEE
T ss_pred -----CCCEEEEEChhhccCCccc--------hhHCcEEEEecccccc-CcCcEEEE
Confidence 8999999999987643221 2233999999999997 88888874
No 162
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.25 E-value=3.1e-11 Score=132.62 Aligned_cols=163 Identities=14% Similarity=0.085 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
..+++.+.+++++++|.+.. -++++|||+++..++.++. . ++..|++++.+
T Consensus 77 ~~~~~~a~~~~~~~~~~~~~----------~v~~~~Gs~a~~~al~~~~----~---------------~gd~Vi~~~~~ 127 (425)
T 3ecd_A 77 DEVEALAIERVKRLFNAGHA----------NVQPHSGAQANGAVMLALA----K---------------PGDTVLGMSLD 127 (425)
T ss_dssp CHHHHHHHHHHHHHHTCSEE----------ECCCSSHHHHHHHHHHHHC----C---------------TTCEEEEECC-
T ss_pred HHHHHHHHHHHHHHhCCCCc----------eeecCchHHHHHHHHHHcc----C---------------CCCEEEEcccc
Confidence 35666677889999988652 3568999999988876541 1 12257778888
Q ss_pred chhHH-HHHH--hCCCce--EEEecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcC
Q psy13453 641 NSSVE-KSAI--IGDVPV--RQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYN 714 (764)
Q Consensus 641 H~Sv~-kAa~--~lGl~v--~~Vp~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~g 714 (764)
|.++. ..+. ..|..+ +.++.+ +++.+|+++|+++|++.. +-+|+.+. +..|...++++|+++|++||
T Consensus 128 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~--~~~~~~~~l~~i~~l~~~~~ 200 (425)
T 3ecd_A 128 AGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHK-----PSLIIAGF--SAYPRKLDFARFRAIADSVG 200 (425)
T ss_dssp -----------------CEEEEECCCTTTSSCCHHHHHHHHHHHC-----CSEEEEEC--SCCCSCCCHHHHHHHHHHHT
T ss_pred cccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhcC-----CcEEEEcc--ccCCCcCCHHHHHHHHHHcC
Confidence 87732 3332 345544 455555 458999999999997531 33666553 33489999999999999999
Q ss_pred CEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 715 IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 715 lwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+|+++|.+|+.+....+.+... ++.+|.++.++||++..|.+ |++
T Consensus 201 ~~li~De~~~~g~~~~~~~~~~---~~~~di~~~s~sK~l~g~~~-g~~ 245 (425)
T 3ecd_A 201 AKLMVDMAHIAGVIAAGRHANP---VEHAHVVTSTTHKTLRGPRG-GFV 245 (425)
T ss_dssp CEEEEECGGGHHHHHTTSSCCG---GGTCSEEEEESSGGGCCCSC-EEE
T ss_pred CEEEEECcChHhhhhcccccCc---hhcCcEEEecCCcccCCCCc-EEE
Confidence 9999999976655443322222 22369999999999977764 544
No 163
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.24 E-value=6.1e-11 Score=129.37 Aligned_cols=197 Identities=10% Similarity=-0.008 Sum_probs=133.7
Q ss_pred HHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCC-ccccCCCCCCC-cEEEeCChHHHHHHHHHHHHHHHhhhh
Q psy13453 539 VGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLP-EEFLNCSPGPG-GGIIQSTASEATLVSILVAKRKMINHW 616 (764)
Q Consensus 539 lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p-~~~~~~~~~~~-~GvfTsGgTeANl~Al~aAR~~~~~~~ 616 (764)
+.+.+...+. ....|.......++.+.+.+|+.+.+|.+ -+ .. ..+||+|+|+++..++.+.+..
T Consensus 48 v~~a~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~-------~~~~i~~t~g~~~al~~~~~~~~~~----- 114 (396)
T 3jtx_A 48 ITDALTASLH-ELEKYPLTAGLPELRQACANWLKRRYDGLTVD-------ADNEILPVLGSREALFSFVQTVLNP----- 114 (396)
T ss_dssp HHHHHHHTGG-GGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCC-------TTTSEEEESSHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHhh-hccCCCCCCCcHHHHHHHHHHHHHhcCCCCCC-------CCCeEEEcCCcHHHHHHHHHHHhCC-----
Confidence 3344444443 22334333445789999999999999975 11 13 6899999999998887655210
Q ss_pred ccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecCCCC-cccHHHHHHHHHHhhhcCCCceEEEEeeccC
Q psy13453 617 QSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNG-VLRGDALLTAVKEDLAKGLIPCCLIATLGTT 695 (764)
Q Consensus 617 ~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g-~md~~~Le~~I~~~~~~G~~p~~VvataGTT 695 (764)
+. ...+..|+++.-+|.+...++...|.+++.+|.+++| .+|+++|++++.+. +-+|+.+..++
T Consensus 115 g~---------~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~------~~~v~l~~p~n 179 (396)
T 3jtx_A 115 VS---------DGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWKR------TKLVFVCSPNN 179 (396)
T ss_dssp ------------CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHT------EEEEEEESSCT
T ss_pred CC---------ccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhccC------cEEEEEECCCC
Confidence 00 0001357788889999999999999999999997554 68999999999764 34777778899
Q ss_pred Ccccccc---HHHHHHHHHhcCCEEEEeccccccccccchhhhh---h---cCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 696 GTCAFDN---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHL---K---RGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 696 ~~GaiDp---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~---l---~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
.+|.+-+ +++|+++|++||+|+++|.+|+.+..-....... . ..-...+-+..+++|.++.| ..+|++
T Consensus 180 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 257 (396)
T 3jtx_A 180 PSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFV 257 (396)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEE
T ss_pred CCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEE
Confidence 9999855 5559999999999999999998753321000000 0 00023467888999965544 445554
No 164
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.24 E-value=4.3e-10 Score=123.14 Aligned_cols=161 Identities=16% Similarity=0.093 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+.+++++|.+. ..+||+ |+++|+.++.+.... .+ +..|+++..+|
T Consensus 91 ~~~~~l~~~la~~~~~~~----------~i~~~s-G~~a~~~~~~~l~~~-~~----------------gd~Vl~~~~~~ 142 (401)
T 2bwn_A 91 AYHRRLEAEIAGLHQKEA----------ALVFSS-AYNANDATLSTLRVL-FP----------------GLIIYSDSLNH 142 (401)
T ss_dssp HHHHHHHHHHHHHTTCSE----------EEEESC-HHHHHHHHHHHHHHH-ST----------------TCEEEEETTCC
T ss_pred HHHHHHHHHHHHHhCCCc----------EEEECC-cHHHHHHHHHHHhcC-CC----------------CCEEEECchhh
Confidence 344556777888888643 345544 555887776653221 01 12578888999
Q ss_pred hhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEec
Q psy13453 642 SSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDA 721 (764)
Q Consensus 642 ~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDa 721 (764)
.+...+++..|..++.+|.+ |+++|++.+++... ..+.+|+.+..++.+|.+.|+++|+++|++||+|+++|+
T Consensus 143 ~~~~~~~~~~g~~~~~v~~~-----d~~~le~~l~~~~~--~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De 215 (401)
T 2bwn_A 143 ASMIEGIKRNAGPKRIFRHN-----DVAHLRELIAADDP--AAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDE 215 (401)
T ss_dssp HHHHHHHHHSCCCEEEECTT-----CHHHHHHHHHHSCT--TSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHcCCeEEEEcCC-----CHHHHHHHHHhhcc--CCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEec
Confidence 99999999999999999975 79999999875321 236688889999999999999999999999999999999
Q ss_pred cccccccccchhhh--hhcCC-CcccEEEEcCCccCCCCc
Q psy13453 722 AYAGSALLLPEYAH--LKRGL-EYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 722 A~Gg~~l~~~~~r~--~l~gi-e~aDSit~d~HK~l~~P~ 758 (764)
||+.+.+ .+.... ...++ +..|-+..+++|.++.|-
T Consensus 216 a~~~g~~-~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G 254 (401)
T 2bwn_A 216 VHAVGMY-GPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG 254 (401)
T ss_dssp TTTTTTS-STTSCCHHHHHTCGGGCSEEEEESSSTTCSCC
T ss_pred ccccccc-CCCCceeeeccCccccCcEEEeechhhccCCC
Confidence 9994432 111110 11122 345888889999998653
No 165
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.23 E-value=2.8e-11 Score=132.69 Aligned_cols=194 Identities=10% Similarity=-0.064 Sum_probs=135.1
Q ss_pred HHHHHHHhhccc-CccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhc
Q psy13453 539 VGDMLSGAFGLI-GFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQ 617 (764)
Q Consensus 539 lad~l~~~lN~n-~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~ 617 (764)
+.+.+...+... ...|.......++++.+.+|+.+.+|++.+ .....++|+|||+++..++.+...
T Consensus 41 v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~------~~~~i~~~~g~~~a~~~~~~~~~~------- 107 (410)
T 3e2y_A 41 VKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQID------PNEEILVAVGAYGSLFNSIQGLVD------- 107 (410)
T ss_dssp HHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCC------TTTSEEEESHHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCC------CCCCEEEeCCcHHHHHHHHHHhcC-------
Confidence 334444444322 223443344678899999999999887542 113689999999999888765411
Q ss_pred cCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecC-----------CCCcccHHHHHHHHHHhhhcCCCce
Q psy13453 618 SKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSD-----------DNGVLRGDALLTAVKEDLAKGLIPC 686 (764)
Q Consensus 618 ~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d-----------~~g~md~~~Le~~I~~~~~~G~~p~ 686 (764)
++-.|++..-+|.+....+...|.+++.+|.+ .++.+|+++|++++++. +-
T Consensus 108 ------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~------~~ 169 (410)
T 3e2y_A 108 ------------PGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSK------TK 169 (410)
T ss_dssp ------------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTT------EE
T ss_pred ------------CCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCC------ce
Confidence 11247778888999999999999999999886 35679999999988542 44
Q ss_pred EEEEeeccCCcccc---ccHHHHHHHHHhcCCEEEEeccccccccccchhhh--hhcCCCcccEEEEcCCccCCC-CcCc
Q psy13453 687 CLIATLGTTGTCAF---DNLEELGPICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFDFNTHKWLLV-NFDC 760 (764)
Q Consensus 687 ~VvataGTT~~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~--~l~gie~aDSit~d~HK~l~~-P~~~ 760 (764)
+|+.+..++.+|.+ +++++|+++|++||+++++|.+|+.+..-...... .+.+....+-+..+++|.++. .+.+
T Consensus 170 ~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~ 249 (410)
T 3e2y_A 170 AIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKL 249 (410)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCC
T ss_pred EEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceE
Confidence 77778889999999 78999999999999999999999865432111000 111111234667789999873 3456
Q ss_pred eee
Q psy13453 761 SAM 763 (764)
Q Consensus 761 g~l 763 (764)
|++
T Consensus 250 G~~ 252 (410)
T 3e2y_A 250 GWS 252 (410)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 166
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.23 E-value=2.7e-10 Score=126.12 Aligned_cols=232 Identities=10% Similarity=-0.041 Sum_probs=144.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHHHHHHHHhhcc-cCccccCCchHHHHHHHHHHHHHHHcCCCcc
Q psy13453 502 WRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIVGDMLSGAFGL-IGFSWLSSPACTELEVLVMNWLGKALGLPEE 580 (764)
Q Consensus 502 ~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~-n~~~~~~sp~~t~lE~~v~~~la~llG~p~~ 580 (764)
.-.+.+.+.+.-.++..+.....|++.-...+.++.+ .+.+...+.. ....|.......++.+.+.+|+....+.+-+
T Consensus 36 i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v-~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~ 114 (420)
T 4f4e_A 36 ILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAV-RDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIA 114 (420)
T ss_dssp HHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHH-HHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHH-HHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccc
Confidence 3445555544322333333333333322222222343 3334444433 2234444445567777777777554332100
Q ss_pred ccCCCCCCC--cEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEE
Q psy13453 581 FLNCSPGPG--GGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQL 658 (764)
Q Consensus 581 ~~~~~~~~~--~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~V 658 (764)
.. ..++|+|||+++..++...... . ++..|++++-+|.+....+...|.+++.+
T Consensus 115 -------~~~~~i~~t~G~t~al~~~~~~~~~~--~---------------~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v 170 (420)
T 4f4e_A 115 -------AGRVVTAQALGGTGALKIGADFLRTL--N---------------PKAKVAISDPSWENHRALFDMAGFEVVAY 170 (420)
T ss_dssp -------TTCEEEEEEEHHHHHHHHHHHHHHHH--C---------------TTCCEEEEESCCHHHHHHHHHTTCCEEEE
T ss_pred -------cCceEEEECCccHHHHHHHHHHHHHh--C---------------CCCEEEEeCCCcHhHHHHHHHcCCeEEEe
Confidence 12 5799999999998875432211 1 11247788899999999999999999999
Q ss_pred ec--CCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHHHHHHHhcCCEEEEecccccccccc---
Q psy13453 659 RS--DDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEELGPICQEYNIWLHVDAAYAGSALLL--- 730 (764)
Q Consensus 659 p~--d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~--- 730 (764)
|. ++++.+|+++|++.|++. ...+.+|+.+..++.+|.+ +++++|+++|++||+|+++|.+|++...-.
T Consensus 171 ~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~ 247 (420)
T 4f4e_A 171 PYYDAKTNGVNFDGMLAALNGY---EPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEAD 247 (420)
T ss_dssp ECEETTTTEECHHHHHHHHTTC---CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGG
T ss_pred eeeccccCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchh
Confidence 98 457899999999999742 1235688888899999998 678899999999999999999998765321
Q ss_pred -chhhhhhcCCCcccEEEEcCCccCCCC-cCcee
Q psy13453 731 -PEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSA 762 (764)
Q Consensus 731 -~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~ 762 (764)
..... +.+...-+-+..+++|.++.| ..+|.
T Consensus 248 ~~~~~~-~~~~~~~~i~~~S~SK~~~~~G~RiG~ 280 (420)
T 4f4e_A 248 AAAVRL-FAAANLNVFVSSSFSKSFSLYGERVGA 280 (420)
T ss_dssp GHHHHH-HHHTTCCEEEEEECTTTTTCGGGCEEE
T ss_pred hHHHHH-HHhcCCCEEEEEeCCccCcCcCCCcEE
Confidence 11111 112223356778999988743 23554
No 167
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.23 E-value=5.8e-11 Score=134.43 Aligned_cols=152 Identities=13% Similarity=0.100 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
.-.++.+|+++++|.+ ..++++||++|+..++. ... ++..|+++..+|.
T Consensus 134 ~~~~l~~~la~~~g~~-----------~~i~~~sGt~al~~~l~-----~~~---------------~Gd~Vi~~~~~y~ 182 (464)
T 1ibj_A 134 TRDALESLLAKLDKAD-----------RAFCFTSGMAALSAVTH-----LIK---------------NGEEIVAGDDVYG 182 (464)
T ss_dssp HHHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHT-----TSC---------------TTCEEEEESSCCH
T ss_pred HHHHHHHHHHHHhCCC-----------eEEEECCHHHHHHHHHH-----HhC---------------CCCEEEEECCCch
Confidence 4566778999999874 35788999988754432 111 1224677888888
Q ss_pred hHHHH----HHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEE
Q psy13453 643 SVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLH 718 (764)
Q Consensus 643 Sv~kA----a~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLH 718 (764)
+...+ +...|..++.+|.+ |+++|+++|++. +-+|+.+..++.+|.+.|+++|+++|++||++++
T Consensus 183 ~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~i~~~------tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~li 251 (464)
T 1ibj_A 183 GSDRLLSQVVPRSGVVVKRVNTT-----KLDEVAAAIGPQ------TKLVWLESPTNPRQQISDIRKISEMAHAQGALVL 251 (464)
T ss_dssp HHHHHHHHTSGGGTCEEEEECTT-----SHHHHHHHCCSS------EEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEE
T ss_pred hHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHHhccC------ceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEE
Confidence 87654 34568888888875 799999988643 4588889999999999999999999999999999
Q ss_pred EeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCc--eee
Q psy13453 719 VDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDC--SAM 763 (764)
Q Consensus 719 VDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~--g~l 763 (764)
+|.+|+.+....+- . + .+|.++.++||+++.|.|+ |++
T Consensus 252 vDea~~~g~~~~~~-~-----~-~~div~~S~sK~~~g~~Gl~~G~l 291 (464)
T 1ibj_A 252 VDNSIMSPVLSRPL-E-----L-GADIVMHSATKFIAGHSDVMAGVL 291 (464)
T ss_dssp EECTTTCTTTCCGG-G-----T-TCSEEEEETTTTTTCSSCCCCEEE
T ss_pred EECCCcccccCChh-h-----c-CCEEEEECCcccccCCCCCcEEEE
Confidence 99999865432221 1 1 3699999999999988765 765
No 168
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.23 E-value=5.4e-11 Score=132.80 Aligned_cols=156 Identities=12% Similarity=0.076 Sum_probs=115.2
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|...++|+ .+++++|.+ ..++++|||+||..++.+. .. +...|+
T Consensus 80 ~~p~~~~le~----~lA~l~g~~-----------~~i~~ssGt~Ai~~al~~l----~~---------------~Gd~Vi 125 (415)
T 2fq6_A 80 GTLTHFSLQQ----AMCELEGGA-----------GCVLFPCGAAAVANSILAF----IE---------------QGDHVL 125 (415)
T ss_dssp CCHHHHHHHH----HHHHHHTCS-----------EEEEESSHHHHHHHHHHTT----CC---------------TTCEEE
T ss_pred CCchHHHHHH----HHHHHhCCC-----------eEEEeCCHHHHHHHHHHHH----hC---------------CCCEEE
Confidence 4455555555 667777764 2578899999998877632 11 122577
Q ss_pred ecCCcchhHHHHHH----hCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHH
Q psy13453 636 TSDQSNSSVEKSAI----IGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQ 711 (764)
Q Consensus 636 ~S~~aH~Sv~kAa~----~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~ 711 (764)
++...|.+....+. ..|+.++.++.+ |+++|+++|+++ +-+|+....++.+|.+-|+++|+++|+
T Consensus 126 ~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~-----d~~~le~ai~~~------tklV~~e~~~NptG~v~dl~~I~~la~ 194 (415)
T 2fq6_A 126 MTNTAYEPSQDFCSKILSKLGVTTSWFDPL-----IGADIVKHLQPN------TKIVFLESPGSITMEVHDVPAIVAAVR 194 (415)
T ss_dssp EETTSCHHHHHHHHHTGGGGTCEEEEECTT-----CGGGGGGGCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred EeCCCchHHHHHHHHHHHHcCcEEEEECCC-----CHHHHHHhhccC------CcEEEEECCCCCCCEeecHHHHHHHHH
Confidence 88889988776653 368888888764 788898888653 447888889999999999999999999
Q ss_pred h--cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC--ceee
Q psy13453 712 E--YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD--CSAM 763 (764)
Q Consensus 712 ~--~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~--~g~l 763 (764)
+ ||+++|||++|+.+....| .. . .+|.++.++||+++.+-+ .|++
T Consensus 195 ~~~~g~~livD~a~a~~~~~~p-~~---~---g~Div~~S~sK~lg~~g~~~~G~l 243 (415)
T 2fq6_A 195 SVVPDAIIMIDNTWAAGVLFKA-LD---F---GIDVSIQAATKYLVGHSDAMIGTA 243 (415)
T ss_dssp HHCTTCEEEEECTTTTTTSSCG-GG---G---TCSEEEEETTTTTTCSSSCCCEEE
T ss_pred hhcCCCEEEEECCCcccccCCc-cc---c---CCeEEEEeCccccCCCCCceEEEE
Confidence 9 9999999999986533222 11 1 359999999999987754 5665
No 169
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.22 E-value=3.3e-11 Score=132.80 Aligned_cols=179 Identities=11% Similarity=0.032 Sum_probs=130.1
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCC-CcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGP-GGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~-~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
.|........+.+.+.+|+.+.+|++-+ . ...+||+|||+++..++.+.. . ++
T Consensus 62 ~y~~~~g~~~lr~~la~~~~~~~g~~~~-------~~~~i~~~~g~~~a~~~~~~~~~----~---------------~g 115 (422)
T 3fvs_A 62 QYTKTFGYPPLTKILASFFGELLGQEID-------PLRNVLVTVGGYGALFTAFQALV----D---------------EG 115 (422)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHTCCCC-------HHHHEEEESHHHHHHHHHHHHHC----C---------------TT
T ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCC-------CCCcEEEECChHHHHHHHHHHHc----C---------------CC
Confidence 3444445678899999999999987532 1 258999999999988876541 1 12
Q ss_pred eEEEecCCcchhHHHHHHhCCCceEEEecCC------------CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccc
Q psy13453 632 LVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD------------NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCA 699 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~------------~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Ga 699 (764)
..|++..-+|.+...++...|.+++.+|.+. ++.+|+++|+++++++ +-+|+.+..++.+|.
T Consensus 116 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~nptG~ 189 (422)
T 3fvs_A 116 DEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR------TKALVLNTPNNPLGK 189 (422)
T ss_dssp CEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTT------EEEEEEESSCTTTCC
T ss_pred CEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCC------ceEEEECCCCCCCCc
Confidence 2477788889999999999999999999875 3479999999988643 447777888999999
Q ss_pred cc---cHHHHHHHHHhcCCEEEEeccccccccccchhhh--hhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 700 FD---NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAH--LKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 700 iD---pl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~--~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+- ++++|+++|++||+++++|.+|+.+..-...... .+.+....+-+..++||.++.| ..+|++
T Consensus 190 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~ 259 (422)
T 3fvs_A 190 VFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWV 259 (422)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEE
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEE
Confidence 87 6999999999999999999999874322111000 1111112346677899999744 456654
No 170
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.22 E-value=5e-11 Score=132.93 Aligned_cols=147 Identities=8% Similarity=-0.030 Sum_probs=111.2
Q ss_pred HHHHHHcCCCccccCCCCCCCcEEE---eCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecC-CcchhH
Q psy13453 569 NWLGKALGLPEEFLNCSPGPGGGII---QSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSD-QSNSSV 644 (764)
Q Consensus 569 ~~la~llG~p~~~~~~~~~~~~Gvf---TsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~-~aH~Sv 644 (764)
+.+++++|.+. .++ +++||+||..++.+.. . +...|++++ ..|...
T Consensus 66 ~~lA~l~g~e~-----------alv~p~~~sGt~Ai~~al~all----~---------------~GD~Vl~~~~~~y~~~ 115 (409)
T 3jzl_A 66 RVYATVFKTEA-----------ALVRPQIISGTHAISTVLFGIL----R---------------PDDELLYITGQPYDTL 115 (409)
T ss_dssp HHHHHHHTCSE-----------EEEETTSCSHHHHHHHHHHHHC----C---------------TTCEEEECSSSCCTTH
T ss_pred HHHHHHhCCCc-----------EEEECCCccHHHHHHHHHHHhc----C---------------CCCEEEEeCCCCcHhH
Confidence 46788888754 355 8999999988776431 1 122466666 677666
Q ss_pred HH----------HHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEee----ccCCccccccHHHHHHHH
Q psy13453 645 EK----------SAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATL----GTTGTCAFDNLEELGPIC 710 (764)
Q Consensus 645 ~k----------Aa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~Vvata----GTT~~GaiDpl~eIa~i~ 710 (764)
.. .+...|+.++.++.+++|.+|+++|+++|++. +-+|+... .++.+|.+.|+++|+++|
T Consensus 116 ~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~------tklV~i~~s~g~p~nptg~v~~l~~I~~la 189 (409)
T 3jzl_A 116 EEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTPK------TKMIGIQRSRGYADRPSFTIEKIKEMIVFV 189 (409)
T ss_dssp HHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCHHHHHHHHHHH
T ss_pred HHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhccCC------CeEEEEECCCCCCCCCcCccccHHHHHHHH
Confidence 64 33456889999999989999999999998653 44777777 889999999999999999
Q ss_pred Hh--cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 711 QE--YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 711 ~~--~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
++ ||+|+|||.||+.+...... .-. .+|.++.++||+++.+
T Consensus 190 ~~~~~~~~livD~a~~~~~~~~~p---~~~---g~Div~~S~sK~lgg~ 232 (409)
T 3jzl_A 190 KNINPEVIVFVDNCYGEFVEYQEP---PEV---GADIIAGSLIKNPGGG 232 (409)
T ss_dssp HHHCTTCEEEEECTTCTTTSSCCS---GGG---TCSEEEEETTSGGGTT
T ss_pred HhhCCCCEEEEeCCcccccccCCc---ccc---CCeEEEECccccCCcc
Confidence 99 99999999999875432211 111 3699999999998864
No 171
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.20 E-value=8.2e-11 Score=130.83 Aligned_cols=177 Identities=14% Similarity=0.047 Sum_probs=120.7
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCce
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKL 632 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~ 632 (764)
.|.......++++.+.+++... |.+- .....++|+|||+|+..++.+.+. ++.
T Consensus 91 ~y~~~~g~~~lr~~la~~~~~~-~~~~-------~~~~v~~t~g~t~al~~~~~~l~~-------------------~gd 143 (427)
T 3dyd_A 91 GYAPSIGFLSSREEIASYYHCP-EAPL-------EAKDVILTSGCSQAIDLCLAVLAN-------------------PGQ 143 (427)
T ss_dssp SCCCTTCCHHHHHHHHHHHCBT-TBCC-------CGGGEEEESSHHHHHHHHHHHHCC-------------------TTC
T ss_pred CCCCCCCcHHHHHHHHHHHhhc-CCCC-------ChHHEEEecCcHHHHHHHHHHhcC-------------------CCC
Confidence 3433444555665555554432 3221 114679999999999888776421 122
Q ss_pred EEEecCCcchhHHHHHHhCCCceEEEecC--CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHHH
Q psy13453 633 VAYTSDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEELG 707 (764)
Q Consensus 633 vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d--~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eIa 707 (764)
.|+++.-+|.....++...|++++.+|.+ .++.+|+++|+++|++. +.+|+.+..++.+|.+-+ +++|+
T Consensus 144 ~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~~l~~i~ 217 (427)
T 3dyd_A 144 NILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEK------TACLIVNNPSNPCGSVFSKRHLQKIL 217 (427)
T ss_dssp EEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCTT------EEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred EEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccC------CCEEEEECCCCCCCCCCCHHHHHHHH
Confidence 57788889999999999999999999986 46789999999988543 447777888999999988 99999
Q ss_pred HHHHhcCCEEEEeccccccccccchhhhhhcCC-CcccEE-EEcCCccCCCC-cCceee
Q psy13453 708 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGL-EYVDSF-DFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 708 ~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gi-e~aDSi-t~d~HK~l~~P-~~~g~l 763 (764)
++|++||+++++|.||+++..-...+.. +..+ ...+.| ..++||.++.| ..+|++
T Consensus 218 ~~~~~~~~~~i~Deay~~~~~~g~~~~~-~~~~~~~~~vi~~~S~sK~~~~~G~riG~~ 275 (427)
T 3dyd_A 218 AVAARQCVPILADEIYGDMVFSDCKYEP-LATLSTDVPILSCGGLAKRWLVPGWRLGWI 275 (427)
T ss_dssp HHHHHTTCCEEEECTTTTCBCSSCCCCC-GGGGCSSCCEEEEEESTTTSSCGGGCCEEE
T ss_pred HHHHHCCCEEEEEcCchhhccCCCcCcc-HHHhCCCCcEEEEeeccccCCCcCcceEEE
Confidence 9999999999999999985432111100 0111 112334 45999976544 335554
No 172
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.20 E-value=2.4e-11 Score=136.31 Aligned_cols=160 Identities=9% Similarity=0.024 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecC-Ccch
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSD-QSNS 642 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~-~aH~ 642 (764)
.+++.+++++++|.+... .-+++++||+||..++.+.. . +...|++++ ..|.
T Consensus 67 ~~~l~~~la~~~g~~~~~--------~~i~~~sGt~Ai~~al~al~----~---------------~Gd~Vl~~~~~~y~ 119 (431)
T 3ht4_A 67 RDTLEKVYADVFGAEAGL--------VRPQIISGTHAISTALFGIL----R---------------PGDELLYITGKPYD 119 (431)
T ss_dssp HHHHHHHHHHHTTCSEEC--------CBTTSCSHHHHHHHHHHTTC----C---------------TTCEEEECSSSCCT
T ss_pred HHHHHHHHHHHhCCCccc--------ccceeeCHHHHHHHHHHHhC----C---------------CCCEEEEeCCCCch
Confidence 455667899999987531 11224578999888875321 0 122466666 7888
Q ss_pred hHHHHHHh----------CCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEee----ccCCccccccHHHHHH
Q psy13453 643 SVEKSAII----------GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATL----GTTGTCAFDNLEELGP 708 (764)
Q Consensus 643 Sv~kAa~~----------lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~Vvata----GTT~~GaiDpl~eIa~ 708 (764)
+....+.+ .|++++.+|.+++|.+|+++|+++|++. +-+|+.+. .++.+|..+++++|++
T Consensus 120 ~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~~~------tk~V~i~~sp~np~~~~~~~~~l~~i~~ 193 (431)
T 3ht4_A 120 TLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIHSN------TKMIGIQRSKGYATRPSFTISQIKEMIA 193 (431)
T ss_dssp THHHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCHHHHHHHHH
T ss_pred hHHHHHhhcccccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcCCC------CeEEEEECCCCCCCCCcCCHHHHHHHHH
Confidence 88766543 6889999999989999999999998653 44777776 7788899999999999
Q ss_pred HHHh--cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC---CcCceee
Q psy13453 709 ICQE--YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV---NFDCSAM 763 (764)
Q Consensus 709 i~~~--~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~---P~~~g~l 763 (764)
+|++ +|+|++||.||+.+........ -| +|.++.++||+++. |.| |++
T Consensus 194 la~~~~~~~~livDea~~~~~~~~~~~~---~g---~Di~~~S~sK~lgg~~~~~G-G~v 246 (431)
T 3ht4_A 194 FVKEIKPDVVVFVDNCYGEFIEEQEPCH---VG---ADLMAGSLIKNPGGGIVKTG-GYI 246 (431)
T ss_dssp HHHHHCTTCEEEEECTTCTTSSSCCGGG---TT---CSEEEEETTSGGGTTTCSSC-EEE
T ss_pred HHHhhCCCCEEEEeCCChhhccCCCccc---cC---CeEEEcCccccCCCCCCCce-EEE
Confidence 9999 9999999999998754222111 13 59999999999654 555 554
No 173
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.18 E-value=1.5e-10 Score=126.73 Aligned_cols=166 Identities=17% Similarity=0.126 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+++++++|. + ..+||+|||+|+..++.+++..... +..+ ++-+|+.+...|
T Consensus 82 ~~~~~l~~~la~~~g~-~----------~v~~~~gg~~a~~~al~~~~~~~~~--~~~~---------~~~vi~~~~~yh 139 (397)
T 2ord_A 82 RPQMELAELLSKNTFG-G----------KVFFANTGTEANEAAIKIARKYGKK--KSEK---------KYRILSAHNSFH 139 (397)
T ss_dssp HHHHHHHHHHHHTTTS-C----------EEEEESSHHHHHHHHHHHHHHHHHH--HCTT---------CCEEEEEBTCCC
T ss_pred HHHHHHHHHHHHhcCC-C----------eEEEeCCHHHHHHHHHHHHHHHhhc--CCCC---------CceEEEEcCCcC
Confidence 4556677788888873 2 4789999999999999887643211 0000 123566667778
Q ss_pred hhHHHHHHhCCCc------------eEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccc----cccHHH
Q psy13453 642 SSVEKSAIIGDVP------------VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCA----FDNLEE 705 (764)
Q Consensus 642 ~Sv~kAa~~lGl~------------v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Ga----iDpl~e 705 (764)
.+...++...|.. ++.+|.+ |+++|+++|++ .+.+|+.+..++.+|. .+++++
T Consensus 140 ~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~-----d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~~l~~ 208 (397)
T 2ord_A 140 GRTLGSLTATGQPKYQKPFEPLVPGFEYFEFN-----NVEDLRRKMSE------DVCAVFLEPIQGESGIVPATKEFLEE 208 (397)
T ss_dssp CSSHHHHHHSBCHHHHGGGCSCCTTEEEECTT-----CHHHHHHHCCT------TEEEEEECSEECTTTCEECCHHHHHH
T ss_pred CCchhhhhccCChhhccccCCCCCCeeEecCC-----CHHHHHHHhhc------CeEEEEEecccCCCCcccCCHHHHHH
Confidence 8887788887765 7777753 89999998864 2558888889999998 489999
Q ss_pred HHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 706 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 706 Ia~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
|+++|++||+|+++|.+|++............-++ .+|.+++ +|+++.++.+|++
T Consensus 209 l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~s~--sK~~~~G~r~G~~ 263 (397)
T 2ord_A 209 ARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGV-VPDVLTT--AKGLGGGVPIGAV 263 (397)
T ss_dssp HHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEE
T ss_pred HHHHHHHcCCEEEEEecccCCccCccchhhhhhCC-CCCeeee--ccccCCCcCeEEE
Confidence 99999999999999999986322111111111132 3686655 8999976777775
No 174
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.18 E-value=4.2e-11 Score=134.33 Aligned_cols=168 Identities=14% Similarity=0.038 Sum_probs=112.4
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..+....+|..+.+++++++|.+.. -+++++||+||..++.++++ +...|+
T Consensus 85 g~~~~~~~e~~a~~~la~~~g~~~~----------~v~~~sGs~a~~~a~~~~~~-------------------~Gd~Vl 135 (447)
T 3h7f_A 85 GCEHVDVVENLARDRAKALFGAEFA----------NVQPHSGAQANAAVLHALMS-------------------PGERLL 135 (447)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEE----------ECCCSSHHHHHHHHHHHHCC-------------------TTCEEE
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCce----------EEEeCCHHHHHHHHHHHhcC-------------------CCCEEE
Confidence 3445556777777999999998652 34478899999888775421 112466
Q ss_pred ecCCcchh-HHHH--HHhC--CCceEEEecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHH
Q psy13453 636 TSDQSNSS-VEKS--AIIG--DVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPI 709 (764)
Q Consensus 636 ~S~~aH~S-v~kA--a~~l--Gl~v~~Vp~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i 709 (764)
+++.+|.+ +... .... +..+..++++ +++.+|+++|++++++.. |-+|+.+.+++.++. ++++|+++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~~~i~~~~~~~~~~~--~l~~i~~l 208 (447)
T 3h7f_A 136 GLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFR-----PKVIIAGWSAYPRVL--DFAAFRSI 208 (447)
T ss_dssp EECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHHC-----CSEEEEECSSCCSCC--CHHHHHHH
T ss_pred ecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhcC-----CeEEEEcCCCCCCcc--CHHHHHHH
Confidence 77777755 2111 1111 3345556666 568899999999997642 335555555554443 99999999
Q ss_pred HHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 710 CQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 710 ~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
|++||++||+|.+|+.++.....+... ++.+|.++.++||+++.|.+ |++
T Consensus 209 ~~~~g~lli~Dea~~~g~~~~g~~~~~---~~~~di~~~s~sK~l~G~~g-G~i 258 (447)
T 3h7f_A 209 ADEVGAKLLVDMAHFAGLVAAGLHPSP---VPHADVVSTTVHKTLGGGRS-GLI 258 (447)
T ss_dssp HHHHTCEEEEECTTTHHHHHTTSSCCS---TTTCSEEEEESSGGGCCCSC-EEE
T ss_pred HHHcCCEEEEECCchhhhhcCCCCCCC---CCCCcEEEecCCcCCCCCCe-EEE
Confidence 999999999999986554332221111 24569999999999987866 654
No 175
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.17 E-value=4.8e-10 Score=123.28 Aligned_cols=202 Identities=9% Similarity=0.007 Sum_probs=130.4
Q ss_pred HHHHHHHHhh-c-ccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEE--eCChHHHHHHHHHHHHHHHh
Q psy13453 538 IVGDMLSGAF-G-LIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGII--QSTASEATLVSILVAKRKMI 613 (764)
Q Consensus 538 ~lad~l~~~l-N-~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~Gvf--TsGgTeANl~Al~aAR~~~~ 613 (764)
.+.+.+...+ + .....|...+...++.+.+.+|+....|.+-. ....+| |+|||+|+..++..++..
T Consensus 52 ~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~-------~~~v~~~~t~gg~~a~~~~~~~~~~~-- 122 (412)
T 1ajs_A 52 VVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQ-------EKRVGGVQSLGGTGALRIGAEFLARW-- 122 (412)
T ss_dssp HHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH-------TTCEEEEEEEHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccC-------CCcEEEEECCCcHHHHHHHHHHHHHh--
Confidence 3444445444 2 12233434445567777777776544333100 125788 999999998887544321
Q ss_pred hhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCc-eEEEecC--CCCcccHHHHHHHHHHhhhcCCCceEEEE
Q psy13453 614 NHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVP-VRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLIA 690 (764)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~-v~~Vp~d--~~g~md~~~Le~~I~~~~~~G~~p~~Vva 690 (764)
.. +.. ..+..|++..-+|.+...++...|.+ ++.+|.+ +++.+|+++|++++++. +....+|+.
T Consensus 123 ~~-g~~---------~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~~ 189 (412)
T 1ajs_A 123 YN-GTN---------NKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENA---PEFSIFVLH 189 (412)
T ss_dssp SS-SSS---------CCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHS---CTTCEEEEE
T ss_pred Cc-CcC---------CCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhC---CCCcEEEEE
Confidence 11 000 00024677788899999999999999 9999984 57889999999999753 223557777
Q ss_pred eeccCCcccc---ccHHHHHHHHHhcCCEEEEecccccccccc---c--hhhhhhcCCCcccEEEEcCCccCCCCcC--c
Q psy13453 691 TLGTTGTCAF---DNLEELGPICQEYNIWLHVDAAYAGSALLL---P--EYAHLKRGLEYVDSFDFNTHKWLLVNFD--C 760 (764)
Q Consensus 691 taGTT~~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~---~--~~r~~l~gie~aDSit~d~HK~l~~P~~--~ 760 (764)
+..++.+|.+ +++++|+++|++||+|+++|.+|.++..-. + .... +.+...-+-+..++||.++. .| +
T Consensus 190 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~-~G~ri 267 (412)
T 1ajs_A 190 ACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRY-FVSEGFELFCAQSFSKNFGL-YNERV 267 (412)
T ss_dssp SSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHH-HHHTTCCEEEEEECTTTSCC-GGGCE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHH-HhccCCcEEEEEecccccCC-CCcce
Confidence 8889999998 677889999999999999999988754321 1 1111 11111113668899998764 34 5
Q ss_pred eee
Q psy13453 761 SAM 763 (764)
Q Consensus 761 g~l 763 (764)
|++
T Consensus 268 G~~ 270 (412)
T 1ajs_A 268 GNL 270 (412)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 176
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.17 E-value=6.5e-10 Score=121.73 Aligned_cols=227 Identities=9% Similarity=-0.041 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHHHHHHHHhhc-ccCccccCCchHHHHHHHHHHHHHHHcCCCccc
Q psy13453 503 RHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIVGDMLSGAFG-LIGFSWLSSPACTELEVLVMNWLGKALGLPEEF 581 (764)
Q Consensus 503 ~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~lad~l~~~lN-~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~ 581 (764)
-.+.+.+...-.++..+.....|+++...+...+.+ .+.+..... .....|.......++-+.+.+|+....|++-+
T Consensus 16 ~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v-~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~- 93 (401)
T 7aat_A 16 LGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCV-RKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFK- 93 (401)
T ss_dssp HHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHH-HHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH-
T ss_pred HHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHH-HHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCccccc-
Confidence 344444444322333334444454555444433333 333333332 22333444444556666677777655554211
Q ss_pred cCCCCCCCcEEE--eCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEe
Q psy13453 582 LNCSPGPGGGII--QSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLR 659 (764)
Q Consensus 582 ~~~~~~~~~Gvf--TsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp 659 (764)
....+| |+|||+|+..++.+.+... . +.-.|++++-+|.+....++..|.+++.+|
T Consensus 94 ------~~~i~~v~t~G~~~al~~~~~~l~~~~-~---------------~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~ 151 (401)
T 7aat_A 94 ------SGRYVTVQGISGTGSLRVGANFLQRFF-K---------------FSRDVYLPKPSWGNHTPIFRDAGLQLQAYR 151 (401)
T ss_dssp ------TTCEEEEEEEHHHHHHHHHHHHHHHHC-T---------------TCCEEEEEESCCTTHHHHHHHTTCEEEEEE
T ss_pred ------cCceEEEecCcchHHHHHHHHHHHHhc-c---------------CCCEEEEcCCCchhHHHHHHHcCCeeEeee
Confidence 124556 9999999988876654321 1 122577888999999999999999999999
Q ss_pred cC--CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHHHHHHHhcCCEEEEeccccccccccc---
Q psy13453 660 SD--DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEELGPICQEYNIWLHVDAAYAGSALLLP--- 731 (764)
Q Consensus 660 ~d--~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~--- 731 (764)
.+ +++.+|+++|++.+++. ...+.+|+.+..++.||.+ +++++|+++|++||+|+++|.||+....-..
T Consensus 152 ~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~ 228 (401)
T 7aat_A 152 YYDPKTCSLDFTGAMEDISKI---PEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRD 228 (401)
T ss_dssp CEETTTTEECHHHHHHHHTTS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHH
T ss_pred eeccccCccCHHHHHHHHHhC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCcccc
Confidence 85 47899999999988752 2245688888899999954 6789999999999999999999987543211
Q ss_pred --hhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 732 --EYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 732 --~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
..+... ....-.-+..++||.++.|
T Consensus 229 ~~~~~~~~-~~~~~~i~~~S~sK~~~~~ 255 (401)
T 7aat_A 229 AWALRHFI-EQGIDVVLSQSYAKNMGLY 255 (401)
T ss_dssp THHHHHHH-HTTCCCEEEEECTTTSCCG
T ss_pred HHHHHHHH-hcCCcEEEEecCCcccccc
Confidence 011111 1112246779999988744
No 177
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.17 E-value=7.5e-10 Score=120.82 Aligned_cols=179 Identities=12% Similarity=0.027 Sum_probs=121.9
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEE--eCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccC
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGII--QSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRN 630 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~Gvf--TsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~ 630 (764)
.|.......++.+.+.+|+... +.++ ...+| |+|||+|+..++.+.+... +
T Consensus 64 ~y~~~~g~~~lr~~la~~~~~~-~~~~---------~~v~~~~~~g~~~a~~~~~~~~~~~~-~---------------- 116 (394)
T 2ay1_A 64 TYAGLSGEPEFQKAMGELILGD-GLKS---------ETTATLATVGGTGALRQALELARMAN-P---------------- 116 (394)
T ss_dssp CCCCSSCCHHHHHHHHHHHHGG-GCCG---------GGEEEEEEEHHHHHHHHHHHHHHHHC-T----------------
T ss_pred CCCCCCCcHHHHHHHHHHHhCC-CCCc---------ccEEEEecCCchhHHHHHHHHHHhcC-C----------------
Confidence 3433444566777777766322 2233 25677 9999999998887665321 1
Q ss_pred ceEEEecCCcchhHHHHHHhCCCceEEEecC--CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc---cHHH
Q psy13453 631 KLVAYTSDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD---NLEE 705 (764)
Q Consensus 631 ~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d--~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD---pl~e 705 (764)
+..|++..-+|.+...++...|.+++.+|.+ +++.+|+++|++++++. .....+++.+..++.+|.+- ++++
T Consensus 117 gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~~~~~~nptG~~~~~~~l~~ 193 (394)
T 2ay1_A 117 DLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAA---KKGDMVLLHGCCHNPTGANLTLDQWAE 193 (394)
T ss_dssp TCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTC---CTTCEEEEESSSCTTTCCCCCHHHHHH
T ss_pred CCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHH
Confidence 1136677888999999999999999999986 57889999999999753 11245677788889999885 5678
Q ss_pred HHHHHHhcCCEEEEecccccccccc--c--hhhhhhcCCCccc-EEEEcCCccCCCC-cCceee
Q psy13453 706 LGPICQEYNIWLHVDAAYAGSALLL--P--EYAHLKRGLEYVD-SFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 706 Ia~i~~~~glwLHVDaA~Gg~~l~~--~--~~r~~l~gie~aD-Sit~d~HK~l~~P-~~~g~l 763 (764)
|+++|++||+++++|.+|+++..-. + .... +... ..| -+..++||+++.| ..+|.+
T Consensus 194 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~-~~~~i~~~s~sK~~~~~G~riG~~ 255 (394)
T 2ay1_A 194 IASILEKTGALPLIDLAYQGFGDGLEEDAAGTRL-IASR-IPEVLIAASCSKNFGIYRERTGCL 255 (394)
T ss_dssp HHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHH-HHHH-CSSEEEEEECTTTTTCGGGCEEEE
T ss_pred HHHHHHHCCCEEEEecCccccccCcccchHHHHH-Hhhc-CCCEEEEEeccCCCcCcCCccceE
Confidence 8999999999999999998754311 0 1111 1111 113 4466899998743 334654
No 178
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.17 E-value=1.8e-10 Score=128.53 Aligned_cols=150 Identities=15% Similarity=0.147 Sum_probs=107.8
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
++.+.+++++|.+ ..+|+++||++|..++.+.+...+.+. ...++..|+++..+|.+..
T Consensus 66 ~l~~~la~~~g~~-----------~~i~~~sGt~a~~~al~~l~~~~~~~~----------~~~~gd~Vi~~~~~~~~~~ 124 (437)
T 3bb8_A 66 AFEKKLGEYLGVP-----------YVLTTTSGSSANLLALTALTSPKLGVR----------ALKPGDEVITVAAGFPTTV 124 (437)
T ss_dssp HHHHHHHHHHTCS-----------EEEEESCHHHHHHHHHHHTTCGGGGGG----------SCCTTCEEEECSSSCHHHH
T ss_pred HHHHHHHHHHCCC-----------cEEEeCCHHHHHHHHHHHhhhcccccc----------cCCCcCEEEECCCCcHHHH
Confidence 3445666777764 268999999999888876532111110 0112235888999999999
Q ss_pred HHHHhCCCceEEEecCC-CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEecccc
Q psy13453 646 KSAIIGDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYA 724 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~-~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~G 724 (764)
.++...|..++.+|++. ++.+|+++|+++|++. +-+|+++. .+|...|+++|+++|++||+++|+|+||+
T Consensus 125 ~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~ 195 (437)
T 3bb8_A 125 NPTIQNGLIPVFVDVDIPTYNVNASLIEAAVSDK------TKAIMIAH---TLGNLFDLAEVRRVADKYNLWLIEDCCDA 195 (437)
T ss_dssp HHHHHTTCEEEECCEETTTTEECGGGHHHHCCTT------EEEEEEEC---GGGCCCCHHHHHHHHHHHTCEEEEECTTC
T ss_pred HHHHHcCCEEEEEeccCccCCcCHHHHHHhcCCC------CeEEEEeC---CCCChhcHHHHHHHHHHcCCEEEEECccc
Confidence 99999999999999985 7999999999988643 33565553 46788999999999999999999999998
Q ss_pred ccccccchhhhhhcCCCcccEEEEcC
Q psy13453 725 GSALLLPEYAHLKRGLEYVDSFDFNT 750 (764)
Q Consensus 725 g~~l~~~~~r~~l~gie~aDSit~d~ 750 (764)
.+.... .+. + | ..+|.+++++
T Consensus 196 ~g~~~~--~~~-~-~-~~~d~~~~s~ 216 (437)
T 3bb8_A 196 LGSTYD--GKM-A-G-TFGDIGTVSF 216 (437)
T ss_dssp TTCEET--TEE-T-T-SSSSEEEEEC
T ss_pred cCceEC--Cee-c-c-cccCEEEEEC
Confidence 654431 111 1 2 1357777774
No 179
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.16 E-value=1.4e-10 Score=125.50 Aligned_cols=165 Identities=17% Similarity=0.126 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS 643 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S 643 (764)
..++.+++++++|.++ ..++|+|||+++..++.++|..... +..+ ++-+++.+..-|.+
T Consensus 72 ~~~l~~~la~~~g~~~----------~v~~~~g~t~a~~~~~~~~~~~~~~--~~~g---------~~~vl~~~~~y~~~ 130 (375)
T 2eh6_A 72 QEELAHKLVKHFWTEG----------KVFFANSGTESVEAAIKLARKYWRD--KGKN---------KWKFISFENSFHGR 130 (375)
T ss_dssp HHHHHHHHHHTSSSCE----------EEEEESSHHHHHHHHHHHHHHHHHH--TTCC---------CCEEEEEBTCCCCS
T ss_pred HHHHHHHHHhhcCCCC----------eEEEeCchHHHHHHHHHHHHHHhcc--CCCC---------CCEEEEECCCcCCC
Confidence 3456688888888842 4789999999999998876532210 0000 02244444445766
Q ss_pred HHHHHHhCCCc------------eEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc----HHHHH
Q psy13453 644 VEKSAIIGDVP------------VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN----LEELG 707 (764)
Q Consensus 644 v~kAa~~lGl~------------v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp----l~eIa 707 (764)
...+....|.. +..+|. +|+++|+++|+++ +.+|+.+..++.+|.+.| +++|+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~------~~~v~~~~~~~~tG~~~~~~~~l~~i~ 199 (375)
T 2eh6_A 131 TYGSLSATGQPKFHKGFEPLVPGFSYAKL-----NDIDSVYKLLDEE------TAGIIIEVIQGEGGVNEASEDFLSKLQ 199 (375)
T ss_dssp SHHHHHHCBCGGGTTTTCSCCSSEEEECT-----TCHHHHHTTCCTT------EEEEEECSEETTTTSEECCHHHHHHHH
T ss_pred chhhhhhcCCccccCCCCCCCCCceeCCC-----chHHHHHHHhcCC------eEEEEEeCccCCCCCcCCCHHHHHHHH
Confidence 66555554332 344433 5899999888642 457777888888999977 99999
Q ss_pred HHHHhcCCEEEEeccccccccccch-hhhhhcCCCcccEEEEcCCccCCCCcCceeeC
Q psy13453 708 PICQEYNIWLHVDAAYAGSALLLPE-YAHLKRGLEYVDSFDFNTHKWLLVNFDCSAMW 764 (764)
Q Consensus 708 ~i~~~~glwLHVDaA~Gg~~l~~~~-~r~~l~gie~aDSit~d~HK~l~~P~~~g~l~ 764 (764)
++|++||+|+|+|.+|++... .+. .....-|. .+|.++++ |+++.++++|+++
T Consensus 200 ~~~~~~~~~li~De~~~~~~~-~~~~~~~~~~~~-~~d~~s~S--K~~~~g~~~G~~~ 253 (375)
T 2eh6_A 200 EICKEKDVLLIIDEVQTGIGR-TGEFYAYQHFNL-KPDVIALA--KGLGGGVPIGAIL 253 (375)
T ss_dssp HHHHHHTCEEEEECTTTTTTT-TSSSSGGGGGTC-CCSEEEEC--GGGGTTSCCEEEE
T ss_pred HHHHHhCCEEEEeccccCCCC-CCcchhhhhcCC-CCCEEEEc--ccccCCCCeEEEE
Confidence 999999999999999996321 111 11111232 36888877 8888888888763
No 180
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.16 E-value=5.1e-10 Score=123.17 Aligned_cols=231 Identities=10% Similarity=-0.086 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHHHHHHHH-hhcc-cCccccCCchHHHHHHHHHHHHHHHcCCCcc
Q psy13453 503 RHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIVGDMLSG-AFGL-IGFSWLSSPACTELEVLVMNWLGKALGLPEE 580 (764)
Q Consensus 503 ~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~lad~l~~-~lN~-n~~~~~~sp~~t~lE~~v~~~la~llG~p~~ 580 (764)
..+.+.+.+.-.++.....+..++++.......+. +.+.+.. .+.. ....|...+...++.+.+.+|+.+..|.+-+
T Consensus 17 ~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~-v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~ 95 (412)
T 1yaa_A 17 FGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPS-VKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQ 95 (412)
T ss_dssp HHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHH-HHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHH-HHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCC
Confidence 44555444321122333444444444322222333 4444444 4432 2223434445667777777777655453211
Q ss_pred ccCCCCCCCcEEE--eCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEE
Q psy13453 581 FLNCSPGPGGGII--QSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQL 658 (764)
Q Consensus 581 ~~~~~~~~~~Gvf--TsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~V 658 (764)
....+| |+|||+|+..++..++.. .+ +..|+++.-+|.+...+++..|.+++.+
T Consensus 96 -------~~~i~~~~t~g~~~a~~~~~~~~~~~-~~----------------gd~Vl~~~p~~~~~~~~~~~~g~~~~~v 151 (412)
T 1yaa_A 96 -------EDRVISVQSLSGTGALHISAKFFSKF-FP----------------DKLVYLSKPTWANHMAIFENQGLKTATY 151 (412)
T ss_dssp -------TTCEEEEEEEHHHHHHHHHHHHHHHH-CT----------------TCCEEEEESCCTTHHHHHHTTTCCEEEE
T ss_pred -------cceEEEEeccchHhHHHHHHHHHHHh-CC----------------CCEEEEeCCCCccHHHHHHHcCceEEEE
Confidence 125788 999999988775443321 11 1136777888999999999999999999
Q ss_pred ec-C-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHHHHHHHhcCCEEEEecccccccccc---
Q psy13453 659 RS-D-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEELGPICQEYNIWLHVDAAYAGSALLL--- 730 (764)
Q Consensus 659 p~-d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~--- 730 (764)
|. + +++.+|+++|++++++.. ....+++.+..++.+|.+ +++++|+++|++||+++++|.+|+....-.
T Consensus 152 ~~~~~~~~~~d~~~l~~~l~~~~---~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~ 228 (412)
T 1yaa_A 152 PYWANETKSLDLNGFLNAIQKAP---EGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDK 228 (412)
T ss_dssp ECEETTTTEECHHHHHHHHHHSC---TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHH
T ss_pred eeecCCCCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccc
Confidence 98 5 378899999999997531 123456668889999998 467789999999999999999997643211
Q ss_pred c--hhhhhhcCCCc---ccEEEEcCCccCCCCcC--ceee
Q psy13453 731 P--EYAHLKRGLEY---VDSFDFNTHKWLLVNFD--CSAM 763 (764)
Q Consensus 731 ~--~~r~~l~gie~---aDSit~d~HK~l~~P~~--~g~l 763 (764)
+ .... +..... -+-+..++||.++ |.| +|.+
T Consensus 229 ~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~-~~GlriG~~ 266 (412)
T 1yaa_A 229 DAYAVRL-GVEKLSTVSPVFVCQSFAKNAG-MYGERVGCF 266 (412)
T ss_dssp HTHHHHH-HHHHTTTTCCEEEEEECTTTSC-CGGGCEEEE
T ss_pred hhHHHHH-HHhcCCCCcceEEEeccCCCCC-CcCCcceEE
Confidence 0 1111 111111 1456789999887 544 4654
No 181
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.16 E-value=1.8e-10 Score=130.27 Aligned_cols=226 Identities=8% Similarity=-0.025 Sum_probs=147.6
Q ss_pred ccccCCcceeeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc-cCchhhh
Q psy13453 11 AYPSETLSLLIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI-QSLNAPV 89 (764)
Q Consensus 11 ~~~~~~~~~~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i-Dpi~~ia 89 (764)
...++. .|.|..++++++|+.. +.||+++++++|+++|+++|+++ +.+++.+.++ ++|.+ ||+++++
T Consensus 159 Vlv~~~---~h~~~~~~~~~~G~~v---v~v~~~~~~~~d~~~L~~~i~~~-----t~~v~~~~pn-~~G~~~~~l~~i~ 226 (474)
T 1wyu_B 159 VLVPDS---AHGSNPATASMAGYQV---REIPSGPEGEVDLEALKRELGPH-----VAALMLTNPN-TLGLFERRILEIS 226 (474)
T ss_dssp EEEETT---SCTHHHHHHHHTTCEE---EEECBCTTSSBCHHHHHHHCSTT-----EEEEEECSSC-TTSCCCTTHHHHH
T ss_pred EEEeCC---cChhhHHHHHHCCCEE---EEecCCCCCCcCHHHHHHhhCCC-----ceEEEEECCC-CCcccCCCHHHHH
Confidence 444555 7999999999999976 99999999999999999999753 2344566676 59999 8999988
Q ss_pred c-----CCCceeccccc---------------------cc-----c------ceeeeecCCCcccccccccc---ccCCc
Q psy13453 90 S-----NGPLKVGGVLR---------------------RV-----Y------SSCLVPRGQKSLRTTVLFHF---LFQHW 129 (764)
Q Consensus 90 ~-----~~wlHVDa~l~---------------------~~-----y------~s~ll~rd~~~l~~~~s~~~---d~~d~ 129 (764)
+ ++|+|+|++.. ++ + +++++.+++ ... .+...+ +-..+
T Consensus 227 ~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~-l~~-~l~~~~~~~~g~~~ 304 (474)
T 1wyu_B 227 RLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAH-LAP-YLPVPLVERGEEGF 304 (474)
T ss_dssp HHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGG-GGG-GCCSCEEEECSSCE
T ss_pred HHHHHcCCEEEEeCchhhhhccCCCcccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHH-HHH-hCCCCeeeccCCee
Confidence 6 89999999531 11 0 123333321 100 000000 00001
Q ss_pred ----ccC---------CCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC-CceeEEEEeec
Q psy13453 130 ----QIP---------LGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP-SMGLVCFRLKV 195 (764)
Q Consensus 130 ----tle---------~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P-~l~iV~Fry~P 195 (764)
+.+ +.-.....+.|+.++.+|.++++++.++..++++++.+.|++. ++++..++ .+..+.+.+ +
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-~ 382 (474)
T 1wyu_B 305 YLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK-GYRVPYDGPSMHEFVAQP-P 382 (474)
T ss_dssp EEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCSSCSSCCSCEEEBC-S
T ss_pred EecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcEecCCCCcceEEEEEc-C
Confidence 001 1111234577999999999999999999999999999999997 88874433 332223322 1
Q ss_pred cccccccccccCccCCccHHHHHHHHHHHhcCcEEEEece-eCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 196 RFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGS-FQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 196 ~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~-l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
. +.+ ..++.++|.++|+....... .....++|++++. .+++++++.+++.|+++.++
T Consensus 383 ~--------------~~~--~~~l~~~L~~~Gi~~~~~~~~~~~~~~lRis~~~-~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 383 E--------------GFR--ALDLAKGLLELGFHPPTVYFPLIVKEALMVEPTE-TEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp T--------------TCC--HHHHHHHHHHTTCCCCEESCSTTSTTCEEECCCT-TSCHHHHHHHHHHHHHHHTS
T ss_pred C--------------CCC--HHHHHHHHHHCCccccccccccccCCEEEEEeec-CCCHHHHHHHHHHHHHHHHh
Confidence 1 111 25688888888986322110 1124679997663 45789999999999887643
No 182
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.16 E-value=1.4e-10 Score=129.94 Aligned_cols=147 Identities=10% Similarity=-0.005 Sum_probs=107.8
Q ss_pred HHHHHHcCCCccccCCCCCCCcEEE---eCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecC-CcchhH
Q psy13453 569 NWLGKALGLPEEFLNCSPGPGGGII---QSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSD-QSNSSV 644 (764)
Q Consensus 569 ~~la~llG~p~~~~~~~~~~~~Gvf---TsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~-~aH~Sv 644 (764)
+.+++++|.+. .++ +++||+||..++.+. .. +...|++++ ..|...
T Consensus 81 ~~lA~l~g~e~-----------alv~p~~~sGt~A~~~al~al----l~---------------pGD~Vl~~~~~~y~~~ 130 (427)
T 3hvy_A 81 RVYANIFNTES-----------AFVRPHFVNGTHAIGAALFGN----LR---------------PNDTMMSICGMPYDTL 130 (427)
T ss_dssp HHHHHHHTCSE-----------EEEETTCCSHHHHHHHHHHHT----CC---------------TTCEEEECSSSCCGGG
T ss_pred HHHHHHhCCCc-----------eEEeCCCCcHHHHHHHHHHHh----cC---------------CCCEEEEeCCCCchhH
Confidence 56788888754 355 889999998776542 11 122466665 555443
Q ss_pred H-----------HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEee----ccCCccccccHHHHHHH
Q psy13453 645 E-----------KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATL----GTTGTCAFDNLEELGPI 709 (764)
Q Consensus 645 ~-----------kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~Vvata----GTT~~GaiDpl~eIa~i 709 (764)
. ..+...|++++.|+. ++|.+|+++|+++|++. ..+-+|+++. .++.+|.+.|+++|+++
T Consensus 131 ~~~~g~~~~~~~~~l~~~G~~~~~v~~-~~~~~d~e~l~~~i~~~----~~tklV~i~~s~gyp~nptg~v~dl~~i~~i 205 (427)
T 3hvy_A 131 HDIIGMDDSKKVGSLREYGVKYKMVDL-KDGKVDINTVKEELKKD----DSIKLIHIQRSTGYGWRKSLRIAEIAEIIKS 205 (427)
T ss_dssp HHHHTCCTTCCSCCTGGGTCEEEECCC-BTTBCCHHHHHHHHHHC----TTEEEEEEESSCCSSSSCCCCHHHHHHHHHH
T ss_pred HHHhccccchhhhHHHHcCCEEEEecC-CCCCcCHHHHHHHhhCC----CCCEEEEEECCCCCCCCccccHHHHHHHHHH
Confidence 3 334456889999998 78999999999999741 1244777777 78899999999999999
Q ss_pred HHh--cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCC
Q psy13453 710 CQE--YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLV 756 (764)
Q Consensus 710 ~~~--~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~ 756 (764)
|++ +|+|++||.||+.+....... -. .+|.++.++||+++.
T Consensus 206 a~~~~~g~~livD~a~~~~~~~~~p~---~~---gaDiv~~S~sK~lgg 248 (427)
T 3hvy_A 206 IREVNENVIVFVDNCYGEFVEEKEPT---DV---GADIIAGSLIKNIGG 248 (427)
T ss_dssp HHHHCSSSEEEEECTTCTTTSSSCGG---GG---TCSEEEEETTSGGGT
T ss_pred HHHhCCCCEEEEECCccccccCCCCc---cc---CCeEEEECCcccccc
Confidence 999 899999999998765322111 11 369999999999986
No 183
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.15 E-value=2.2e-10 Score=125.36 Aligned_cols=166 Identities=16% Similarity=0.125 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+++++++|.+ ..+||+|||+||..++.+++.....+ +.. .++-+++.+...|
T Consensus 81 ~~~~~l~~~la~~~~~~-----------~v~~~~gg~~a~~~al~~~~~~~~~~-~~~---------g~~~vi~~~~~y~ 139 (406)
T 4adb_A 81 EPVLRLAKKLIDATFAD-----------RVFFCNSGAEANEAALKLARKFAHDR-YGS---------HKSGIVAFKNAFH 139 (406)
T ss_dssp HHHHHHHHHHHHHSSCS-----------EEEEESSHHHHHHHHHHHHHHHHHHH-TCT---------TCCEEEEETTCCC
T ss_pred HHHHHHHHHHHhhCCCC-----------eEEEeCcHHHHHHHHHHHHHHHHHhc-CCC---------CCcEEEEECCCcC
Confidence 34566778899998754 47899999999999999887643221 000 1134677788888
Q ss_pred hhHHHHHHhCCC------------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcc-----ccccHH
Q psy13453 642 SSVEKSAIIGDV------------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTC-----AFDNLE 704 (764)
Q Consensus 642 ~Sv~kAa~~lGl------------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~G-----aiDpl~ 704 (764)
.+...+....|. ++..+|. .|+++|+++|++. +.+|+.+ .++.+| ..++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~------~~~v~~~-p~np~g~~~~~~~~~l~ 207 (406)
T 4adb_A 140 GRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-----NDINSASALIDDS------TCAVIVE-PIQGEGGVVPASNAFLQ 207 (406)
T ss_dssp CSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-----TCHHHHHTTCSTT------EEEEEEC-SEETTTTSEECCHHHHH
T ss_pred CCcHHHhhccCCccccccCCCCCCCceEeCC-----CcHHHHHHHhcCC------eEEEEEe-CCcCCCCCccCCHHHHH
Confidence 777777666552 3444443 3799999888632 4477777 666666 446899
Q ss_pred HHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 705 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 705 eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+|+++|++||+|+|+|.+|+++......+.....++ ..|.+++ ||+++..+.+|++
T Consensus 208 ~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~t~--sK~~~~G~r~G~~ 263 (406)
T 4adb_A 208 GLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGV-TPDLLTT--AKALGGGFPVGAL 263 (406)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEE
T ss_pred HHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCC-CCCEEEe--chhhcCCCCeEEE
Confidence 999999999999999999985422221122222233 3577765 9999854456665
No 184
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.15 E-value=1.5e-09 Score=120.33 Aligned_cols=175 Identities=12% Similarity=-0.033 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS 643 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S 643 (764)
..++.+.++++++.+. ...+||+|||+||..++.+++.....+ +. .++-+++.....|.+
T Consensus 88 ~~~l~~~la~~~~~~~---------~~v~~~~ggtea~~~ai~~~~~~~~~~-g~----------~~~~vi~~~~~yh~~ 147 (429)
T 1s0a_A 88 AIELCRKLVAMTPQPL---------ECVFLADSGSVAVEVAMKMALQYWQAK-GE----------ARQRFLTFRNGYHGD 147 (429)
T ss_dssp HHHHHHHHHHHSCTTC---------CEEEEESSHHHHHHHHHHHHHHHHHHH-TC----------CCCEEEEETTCCCCS
T ss_pred HHHHHHHHHHhCCCCC---------CEEEEeCCHHHHHHHHHHHHHHHhccc-CC----------CCCeEEEECCCCCCC
Confidence 3445567888887644 368999999999999999876432110 00 012345555567766
Q ss_pred HHHHHHhCC-------------CceEEEecCC------CCcccHHHHHHHHHHhhhcCCCceEEEEeec-cCCcccccc-
Q psy13453 644 VEKSAIIGD-------------VPVRQLRSDD------NGVLRGDALLTAVKEDLAKGLIPCCLIATLG-TTGTCAFDN- 702 (764)
Q Consensus 644 v~kAa~~lG-------------l~v~~Vp~d~------~g~md~~~Le~~I~~~~~~G~~p~~VvataG-TT~~GaiDp- 702 (764)
..-++.+.| ..++.++++. .+.+|+++|+++|++. +..+.+|+++-. ++.+|.+-+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~n~tG~~~~~ 224 (429)
T 1s0a_A 148 TFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAH---RHEIAAVIIEPIVQGAGGMRMYH 224 (429)
T ss_dssp SHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHH---TTTEEEEEECSSEECTTTCEEBC
T ss_pred chhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhC---CCCEEEEEEeecccCCCCcccCC
Confidence 555544433 1466677642 2469999999999753 112446665555 577998766
Q ss_pred ---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceeeC
Q psy13453 703 ---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAMW 764 (764)
Q Consensus 703 ---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l~ 764 (764)
+++|+++|++||++||+|.+|.++......+.....++ ..|.++++ |+++.+ +.+|+++
T Consensus 225 ~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~l~~G~~~iG~~~ 287 (429)
T 1s0a_A 225 PEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEI-APDILCLG--KALTGGTMTLSATL 287 (429)
T ss_dssp THHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTSSSCCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCC-CCCEEEec--ccccCCCccceEEE
Confidence 99999999999999999999986321111111111233 35877765 988866 7778753
No 185
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.15 E-value=1.5e-10 Score=127.86 Aligned_cols=145 Identities=12% Similarity=0.081 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
...++.+.+++++|.+. .+++++||+||..++. . .. ++..|+++..+|.
T Consensus 56 ~~~~lr~~la~~~g~~~-----------~i~~~sGt~a~~~al~-~----~~---------------~gd~Vi~~~~~y~ 104 (393)
T 1n8p_A 56 NRENLERAVAALENAQY-----------GLAFSSGSATTATILQ-S----LP---------------QGSHAVSIGDVYG 104 (393)
T ss_dssp HHHHHHHHHHHHTTCSE-----------EEEESCHHHHHHHHHH-T----SC---------------SSCEEEEESSCCH
T ss_pred hHHHHHHHHHHHhCCCc-----------EEEECChHHHHHHHHH-H----cC---------------CCCEEEEeCCCch
Confidence 34456677888888652 4677777999888775 2 11 1124667778887
Q ss_pred hHHHH----HHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc----C
Q psy13453 643 SVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY----N 714 (764)
Q Consensus 643 Sv~kA----a~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~----g 714 (764)
+.... +...|++++.+|++ | ++|+++|++. +.+|+....++.+|.+-|+++|+++|++| |
T Consensus 105 ~~~~~~~~~~~~~G~~v~~v~~~-----d-~~l~~~i~~~------t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~ 172 (393)
T 1n8p_A 105 GTHRYFTKVANAHGVETSFTNDL-----L-NDLPQLIKEN------TKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQD 172 (393)
T ss_dssp HHHHHHHHTSTTTCSCCEEESSH-----H-HHHHHHSCSS------EEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHcCcEEEEeCCC-----h-HHHHHhcccC------ceEEEEECCCCCcceecCHHHHHHHHHHhCCCCC
Confidence 65553 34568899999876 7 8888887542 45888888999999999999999999999 9
Q ss_pred CEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 715 IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 715 lwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+++|+|++|+.+....+ .. + .+|.++.++||+++.+
T Consensus 173 ~~livD~a~~~~~~~~~--~~----~-~~di~~~S~sK~~g~~ 208 (393)
T 1n8p_A 173 VILVVDNTFLSPYISNP--LN----F-GADIVVHSATKYINGH 208 (393)
T ss_dssp CEEEEECTTTHHHHCCG--GG----G-TCSEEEEETTTTTTCS
T ss_pred CEEEEeCCccccccCCH--HH----c-CCeEEEEECcccccCC
Confidence 99999999998754311 11 1 3699999999988844
No 186
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.14 E-value=1.4e-10 Score=128.96 Aligned_cols=196 Identities=10% Similarity=0.043 Sum_probs=121.7
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCcccccc-C
Q psy13453 552 FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIR-N 630 (764)
Q Consensus 552 ~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~-~ 630 (764)
..|.......++++.+.+|+.+..|++-+ ....+||+|||+++..++.+... +.. ..+. +...+.. .
T Consensus 77 ~~y~~~~g~~~lr~~ia~~l~~~~g~~~~-------~~~i~~t~G~t~al~~~~~~l~~---~gd-~~~~-~~~~~~g~~ 144 (444)
T 3if2_A 77 ANYSNPQGDSAFIDALVGFFNRHYDWNLT-------SENIALTNGSQNAFFYLFNLFGG---AFV-NEHS-QDKESKSVD 144 (444)
T ss_dssp HSCCCTTCCHHHHHHHHHHHHHHHCCCCC-------GGGEEEESSHHHHHHHHHHHSSE---EEE-CC--------CEEE
T ss_pred hccCCCCCCHHHHHHHHHHHHhhcCCCCC-------HHHEEEecCcHHHHHHHHHHHhC---CCc-cccc-ccccccccc
Confidence 34555555678999999999988876532 24689999999999888765421 100 0000 0000000 0
Q ss_pred ceEEEecCCcchhHHHHH------HhCCCceEEEecCC-CC----cccHHHHHHHHHHhhhcCCCceEEEEeeccCCccc
Q psy13453 631 KLVAYTSDQSNSSVEKSA------IIGDVPVRQLRSDD-NG----VLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCA 699 (764)
Q Consensus 631 ~~vi~~S~~aH~Sv~kAa------~~lGl~v~~Vp~d~-~g----~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Ga 699 (764)
+-++++..-+|.....++ ...|..+..+|+|+ +| .+|+++|++++++.. ..+.+|+.+..++.+|.
T Consensus 145 ~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~---~~~~~v~i~~p~nptG~ 221 (444)
T 3if2_A 145 KSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKE---GRIGAICCSRPTNPTGN 221 (444)
T ss_dssp EEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHT---TCEEEEEEESSCTTTCC
T ss_pred ceEEEeCCCCccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcC---CCceEEEeCCCCCCCCC
Confidence 023433244454443322 22466788888875 33 799999999865421 12557777888899999
Q ss_pred ccc---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 700 FDN---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 700 iDp---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+-| +++|+++|++||+|+|+|.+|+...... .+..........+-+..++||++.....+|++
T Consensus 222 ~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~ 287 (444)
T 3if2_A 222 VLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNI-IYSDAHLNWDNNTILCFSLSKIGLPGMRTGII 287 (444)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCCCCCCTTEEEEEESTTTTCGGGCCEEE
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEECCCCCccccc-ccccccccCCCCEEEEechhhccCCCCceEEE
Confidence 987 8889999999999999999998532111 01111111223478889999985544666654
No 187
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.14 E-value=5.4e-10 Score=127.42 Aligned_cols=155 Identities=15% Similarity=0.077 Sum_probs=117.2
Q ss_pred CccccCCchHHHHHHHHHHHHHHHcC-CCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCcccccc
Q psy13453 551 GFSWLSSPACTELEVLVMNWLGKALG-LPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIR 629 (764)
Q Consensus 551 ~~~~~~sp~~t~lE~~v~~~la~llG-~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~ 629 (764)
...|..+.....+.+.+.+|+.+..| ++.+ ....++|+|+++++.+++.+... . +..
T Consensus 122 ~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~-------~~~i~~t~G~~~ai~~~~~~l~~----~-----------gd~ 179 (498)
T 3ihj_A 122 LGSYSASQGVNCIREDVAAYITRRDGGVPAD-------PDNIYLTTGASDGISTILKILVS----G-----------GGK 179 (498)
T ss_dssp ------CCSCHHHHHHHHHHHHHHTTTCCCC-------GGGEEEESSHHHHHHHHHHHHCC----C-----------CGG
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhcCCCCCC-------cccEEEcCCHHHHHHHHHHHHcC----C-----------CCC
Confidence 35566677778899999999999885 6432 14689999999998877664311 0 111
Q ss_pred CceEEEecCCcchhHHHHHHhCCCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHH
Q psy13453 630 NKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLE 704 (764)
Q Consensus 630 ~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~ 704 (764)
++..|+++.-.|.++..++...|..++.+++++ ++.+|+++|+++|++... +..+-+|+.+..++.||.+ ++++
T Consensus 180 ~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~-~~~~k~i~l~np~NPTG~v~s~~~l~ 258 (498)
T 3ihj_A 180 SRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKD-HCDPKVLCIINPGNPTGQVQSRKCIE 258 (498)
T ss_dssp GSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTT-TSEEEEEEEESSCTTTCCCCCHHHHH
T ss_pred CCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhc-cCCCeEEEEECCCCCCCCcCCHHHHH
Confidence 234688899999999999999999999999985 468999999999987533 2235577777889999998 6788
Q ss_pred HHHHHHHhcCCEEEEecccccccc
Q psy13453 705 ELGPICQEYNIWLHVDAAYAGSAL 728 (764)
Q Consensus 705 eIa~i~~~~glwLHVDaA~Gg~~l 728 (764)
+|+++|++||+|+++|.+|+....
T Consensus 259 ~i~~la~~~~~~li~De~y~~~~~ 282 (498)
T 3ihj_A 259 DVIHFAWEEKLFLLADEVYQDNVY 282 (498)
T ss_dssp HHHHHHHHHTCEEEEECTTTTCBC
T ss_pred HHHHHHHHcCcEEEEEcCcccccc
Confidence 899999999999999999987543
No 188
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.14 E-value=4.4e-10 Score=122.91 Aligned_cols=226 Identities=8% Similarity=-0.038 Sum_probs=152.8
Q ss_pred eeee--HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CC
Q psy13453 20 LIYE--SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NG 92 (764)
Q Consensus 20 ~~YS--v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~ 92 (764)
.||| +.+++...|... +.||+++++.+|+++|+++|++. ++-+++.+.+++++|.+.|++++++ ++
T Consensus 97 ~~~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~i~~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~ 169 (411)
T 3nnk_A 97 GRFGHLLCEIARRCRAEV---HTIEVPWGEVFTPDQVEDAVKRI----RPRLLLTVQGDTSTTMLQPLAELGEICRRYDA 169 (411)
T ss_dssp SHHHHHHHHHHHHTTCEE---EEEECCTTCCCCHHHHHHHHHHH----CCSEEEEESEETTTTEECCCTTHHHHHHHHTC
T ss_pred CchHHHHHHHHHHcCCeE---EEEecCCCCCCCHHHHHHHHhhC----CCeEEEEeCCCCCcceeccHHHHHHHHHHcCC
Confidence 4677 889999999876 99999999999999999999863 2235567778999999999999886 89
Q ss_pred Cceeccccc--------------------cc--cc----eeeeecCCCc--ccccc-----------------ccccccC
Q psy13453 93 PLKVGGVLR--------------------RV--YS----SCLVPRGQKS--LRTTV-----------------LFHFLFQ 127 (764)
Q Consensus 93 wlHVDa~l~--------------------~~--y~----s~ll~rd~~~--l~~~~-----------------s~~~d~~ 127 (764)
|+++|++.. ++ ++ ++++.++.-. +.... .....|.
T Consensus 170 ~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~ 249 (411)
T 3nnk_A 170 LFYTDATASLGGNPLETDVWGLDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYF 249 (411)
T ss_dssp EEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTT
T ss_pred EEEEECCcccCCcccchhccCCcEEEecCccccCCCCceEEEEECHHHHHHHhhcccccccccccccccccCCCCccccc
Confidence 999999531 11 00 2222221100 00000 0000000
Q ss_pred C-----------cccCCCC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC---ceeEEEE
Q psy13453 128 H-----------WQIPLGR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS---MGLVCFR 192 (764)
Q Consensus 128 d-----------~tle~SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~---l~iV~Fr 192 (764)
+ ....++. ......+++++..+..+|+.++.++..++++++.+.|++. +++++.++. .++++|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~ 328 (411)
T 3nnk_A 250 DLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAM-GLETFGDLKHKMNNVLGVV 328 (411)
T ss_dssp CHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCSSEEEEE
T ss_pred chHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEeCCCcccccccEEEEE
Confidence 0 0011122 2233466788888888899999999999999999999986 888876543 5677776
Q ss_pred eeccccccccccccCccCCccHHHHHHHHHHHhc-CcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 193 LKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIAR-KVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 193 y~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~-G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
+. . +.+ ..++.++|.++ |..+..........++|++++...+++++++.+++.|+++.+++
T Consensus 329 ~~-~--------------~~~--~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~ 390 (411)
T 3nnk_A 329 IP-Q--------------GIN--GDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYL 390 (411)
T ss_dssp CC-T--------------TCC--HHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred CC-C--------------CCC--HHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHc
Confidence 52 1 111 24677888776 87554332222345899988788889999999999999987664
No 189
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.13 E-value=3.1e-10 Score=125.87 Aligned_cols=154 Identities=16% Similarity=0.092 Sum_probs=112.9
Q ss_pred CchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEe
Q psy13453 557 SPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT 636 (764)
Q Consensus 557 sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~ 636 (764)
.|...++|+ .+++++|.+. .+++++|++|+..++. . .. ++..|++
T Consensus 66 ~p~~~~l~~----~la~~~g~~~-----------~i~~~sG~~ai~~~~~-l----~~---------------~gd~Vl~ 110 (403)
T 3cog_A 66 NPTRNCLEK----AVAALDGAKY-----------CLAFASGLAATVTITH-L----LK---------------AGDQIIC 110 (403)
T ss_dssp CHHHHHHHH----HHHHHHTCSE-----------EEEESCHHHHHHHHHT-T----SC---------------TTCEEEE
T ss_pred CchHHHHHH----HHHHHhCCCc-----------EEEECCHHHHHHHHHH-H----hC---------------CCCEEEE
Confidence 344455554 5566666542 4666777888776654 2 11 1225778
Q ss_pred cCCcchhHHHH----HHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh
Q psy13453 637 SDQSNSSVEKS----AIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE 712 (764)
Q Consensus 637 S~~aH~Sv~kA----a~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~ 712 (764)
+..+|.+.... +...|++++.+|.+ |+++|+++|++. +-+|++...++.+|.+-|+++|+++|++
T Consensus 111 ~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~i~~~------t~~v~~~~p~nptG~~~~l~~i~~la~~ 179 (403)
T 3cog_A 111 MDDVYGGTNRYFRQVASEFGLKISFVDCS-----KIKLLEAAITPE------TKLVWIETPTNPTQKVIDIEGCAHIVHK 179 (403)
T ss_dssp ESSCCHHHHHHHHHTGGGGTCEEEEECTT-----SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTS
T ss_pred eCCCcchHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCcC------CeEEEEECCCCCCCeeeCHHHHHHHHHH
Confidence 88889875554 34578899998876 799999888643 4478888999999999999999999999
Q ss_pred cC-CEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcC--ceee
Q psy13453 713 YN-IWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFD--CSAM 763 (764)
Q Consensus 713 ~g-lwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~--~g~l 763 (764)
|| +|++||.+|+.+....+ .. + .+|.+..++||+++.|.+ +|++
T Consensus 180 ~g~~~livD~~~~~~~~~~~-~~-----~-~~div~~S~sK~~~g~~~~~~G~v 226 (403)
T 3cog_A 180 HGDIILVVDNTFMSPYFQRP-LA-----L-GADISMYSATKYMNGHSDVVMGLV 226 (403)
T ss_dssp SSCCEEEEECTTTCTTTCCT-TT-----T-TCSEEEEETTTTTTCSSCCCCEEE
T ss_pred cCCCEEEEECCCcccccCCc-cc-----c-CCeEEEEcChhhccCCCCCeEEEE
Confidence 99 99999999998654222 11 1 469999999999998876 3765
No 190
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.13 E-value=1e-09 Score=119.73 Aligned_cols=183 Identities=14% Similarity=-0.005 Sum_probs=122.8
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEE--eCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccC
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGII--QSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRN 630 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~Gvf--TsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~ 630 (764)
.|...+...++.+.+.+|+.+.-+.+-+ ....+| |+|||+|+..++.+++.. . +
T Consensus 64 ~y~~~~g~~~lr~~la~~~~~~~~~~~~-------~~~v~~~~~~g~~~a~~~~~~~~~~~--~---------------~ 119 (396)
T 2q7w_A 64 NYLGIDGIPEFGRCTQELLFGKGSALIN-------DKRARTAQTPGGTGALRVAADFLAKN--T---------------S 119 (396)
T ss_dssp CCCCTTCCHHHHHHHHHHHHCTTCHHHH-------TTCEEEEEESHHHHHHHHHHHHHHHH--S---------------C
T ss_pred CCCCCCCCHHHHHHHHHHHhcCCCCccc-------cccEEEEecccchhhHHHHHHHHHHh--C---------------C
Confidence 3444445667777777776443221100 124566 999999998888765431 1 1
Q ss_pred ceEEEecCCcchhHHHHHHhCCCceEEEecC--CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc---cHHH
Q psy13453 631 KLVAYTSDQSNSSVEKSAIIGDVPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD---NLEE 705 (764)
Q Consensus 631 ~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d--~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD---pl~e 705 (764)
+..|++..-+|.+...++...|.+++.+|.+ +++.+|+++|++++++. .....+++.+..++.+|.+- ++++
T Consensus 120 gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~nptG~~~~~~~l~~ 196 (396)
T 2q7w_A 120 VKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEA---QAGDVVLFHGCCHNPTGIDPTLEQWQT 196 (396)
T ss_dssp CCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTC---CTTCEEEEECSSCTTTCCCCCHHHHHH
T ss_pred CCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHH
Confidence 1246777888999999999999999999985 57889999999998642 11245777788899999884 5778
Q ss_pred HHHHHHhcCCEEEEecccccccccc--c--hhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 706 LGPICQEYNIWLHVDAAYAGSALLL--P--EYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 706 Ia~i~~~~glwLHVDaA~Gg~~l~~--~--~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
|+++|++||+++++|.+|+++..-. + .... +.....-+-+..++||.++.| +.+|.+
T Consensus 197 l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~riG~~ 258 (396)
T 2q7w_A 197 LAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRA-FAAMHKELIVASSYSXNFGLYNERVGAC 258 (396)
T ss_dssp HHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHH-HHHHCSCEEEEEECTTTTTCGGGCCEEE
T ss_pred HHHHHHHCCCEEEEecccccccCCccchhHHHHH-HHhcCCcEEEEEeccccccccccccceE
Confidence 9999999999999999998754311 0 1111 111111246688999988743 224554
No 191
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.12 E-value=1e-09 Score=120.90 Aligned_cols=196 Identities=11% Similarity=-0.057 Sum_probs=128.9
Q ss_pred HHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhcc
Q psy13453 539 VGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQS 618 (764)
Q Consensus 539 lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~ 618 (764)
+.+.+....+.....|.......++.+.+.+|+.+..+.+. ....++|+|||+++..++.+.. .
T Consensus 61 v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~--------~~~i~~t~g~~~al~~~~~~l~----~---- 124 (418)
T 3rq1_A 61 VKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEG--------HIRSIATAGGTGGIHHLIHNYT----E---- 124 (418)
T ss_dssp HHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSS--------EEEEEEESHHHHHHHHHHHHHS----C----
T ss_pred HHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCccc--------cccEEECCchHHHHHHHHHHhc----C----
Confidence 34444443332333444444567888888888877665321 1257899999999988776431 1
Q ss_pred CCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeec-cCC
Q psy13453 619 KNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLG-TTG 696 (764)
Q Consensus 619 ~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataG-TT~ 696 (764)
+...|+++.-+|.+...++...|.+++.+|++ +++.+|+++|++++++....+ ...+|+.+.. ++.
T Consensus 125 -----------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~-~~~~vi~~~p~~NP 192 (418)
T 3rq1_A 125 -----------PGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQ-TNVVVIFNTPGNNP 192 (418)
T ss_dssp -----------TTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHC-SEEEEEEECSSCTT
T ss_pred -----------CCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccC-CCEEEEEeCCCCCC
Confidence 12257788889999999999999999999984 567999999999998642211 2335666666 899
Q ss_pred ccccccHHHHH---HHHH------hcCCEEEEeccccccccccchhh---hhhcCCCccc---EEEEcCCccCCCC-cCc
Q psy13453 697 TCAFDNLEELG---PICQ------EYNIWLHVDAAYAGSALLLPEYA---HLKRGLEYVD---SFDFNTHKWLLVN-FDC 760 (764)
Q Consensus 697 ~GaiDpl~eIa---~i~~------~~glwLHVDaA~Gg~~l~~~~~r---~~l~gie~aD---Sit~d~HK~l~~P-~~~ 760 (764)
+|.+-+.+++. ++|+ +||+|+++|.+|.++..-..... ....++ .-| -+..++||.++.| ..+
T Consensus 193 tG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~ 271 (418)
T 3rq1_A 193 TGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHL-PKEILTCVCYSLSKGFTMYGQRV 271 (418)
T ss_dssp TCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTC-CTTEEEEEEEESTTTTTCCSSCC
T ss_pred CCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhc-CCCceEEEEEeCCCCCcCcCCcc
Confidence 99997765555 5555 89999999999976542211111 122222 113 4456999988744 334
Q ss_pred eee
Q psy13453 761 SAM 763 (764)
Q Consensus 761 g~l 763 (764)
|.+
T Consensus 272 G~~ 274 (418)
T 3rq1_A 272 GAM 274 (418)
T ss_dssp EEE
T ss_pred eEE
Confidence 543
No 192
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.10 E-value=7.4e-10 Score=121.90 Aligned_cols=217 Identities=14% Similarity=-0.039 Sum_probs=136.7
Q ss_pred CCCCCCCccccccCCCCChHHHHHHHHHHhhcccCccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCC
Q psy13453 517 ITHWQSPQFNAYFPTGSSYPSIVGDMLSGAFGLIGFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQST 596 (764)
Q Consensus 517 ~~~~~~P~~~~~~~~~~~~~~~lad~l~~~lN~n~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsG 596 (764)
..+..+..+.++-.....++. +.+.+....+.....|...+...++.+.+.+|+.+..+... ....++|+|
T Consensus 39 ~i~l~~g~~~~~~~~~~~~~~-v~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~--------~~~i~~t~g 109 (413)
T 3t18_A 39 VINAALGTLLDDKGKIIALPS-VYDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEG--------YISAIATPG 109 (413)
T ss_dssp CEECCSCCCBCTTSCBCCCHH-HHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSS--------EEEEEEESH
T ss_pred eEeccccCccCCCCCcCChHH-HHHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCccc--------cCcEEEcCc
Confidence 344444445444333333333 34444443322233444455567788888888877655321 136899999
Q ss_pred hHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEec-CCCCcccHHHHHHHH
Q psy13453 597 ASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRS-DDNGVLRGDALLTAV 675 (764)
Q Consensus 597 gTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~-d~~g~md~~~Le~~I 675 (764)
||+++..++.+.. . +...|+++.-+|.+...++...|.+++.+|. ++++.+|+++|++++
T Consensus 110 ~~~al~~~~~~~~----~---------------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l 170 (413)
T 3t18_A 110 GTGAIRSAIFSYL----D---------------EGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDDFAFNIDVYKEAI 170 (413)
T ss_dssp HHHHHHHHHHHHC----C---------------SSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTTSSBCHHHHHHHH
T ss_pred cHHHHHHHHHHhc----C---------------CCCEEEECCCCcccHHHHHHHhCCeEEEeeccCCCCCcCHHHHHHHH
Confidence 9999988776431 1 1224777888999999999999999999998 556799999999999
Q ss_pred HHhhhcCCCceEEEEeec-cCCccccccHHHHH---HHHH------hcCCEEEEeccccccccccchhh---hhhcCCCc
Q psy13453 676 KEDLAKGLIPCCLIATLG-TTGTCAFDNLEELG---PICQ------EYNIWLHVDAAYAGSALLLPEYA---HLKRGLEY 742 (764)
Q Consensus 676 ~~~~~~G~~p~~VvataG-TT~~GaiDpl~eIa---~i~~------~~glwLHVDaA~Gg~~l~~~~~r---~~l~gie~ 742 (764)
++....+ ...+|+.+.. ++.+|.+-+.+++. ++|+ +||+|+++|.+|++......... ....++ .
T Consensus 171 ~~~~~~~-~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~-~ 248 (413)
T 3t18_A 171 DEGIRDS-DRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNL-P 248 (413)
T ss_dssp HHHHHHC-SEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTC-C
T ss_pred HHHhhcC-CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhc-C
Confidence 8642211 1235666666 88999987766655 5555 89999999999977543222111 122222 1
Q ss_pred cc---EEEEcCCccCCCC-cCceee
Q psy13453 743 VD---SFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 743 aD---Sit~d~HK~l~~P-~~~g~l 763 (764)
.| -+..+++|.++.| ..+|.+
T Consensus 249 ~~~~~i~~~S~sK~~~~~G~riG~~ 273 (413)
T 3t18_A 249 RNLFVVVAFSMSKSHTAYGLRSGAA 273 (413)
T ss_dssp TTEEEEEEEEHHHHTTCGGGCCEEE
T ss_pred CCeeEEEEEecCccCCCcCcCcEEE
Confidence 23 3445999998844 334543
No 193
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.10 E-value=7.4e-10 Score=122.93 Aligned_cols=150 Identities=13% Similarity=0.073 Sum_probs=110.1
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEE
Q psy13453 556 SSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAY 635 (764)
Q Consensus 556 ~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~ 635 (764)
..|...++|+ .++++.|.+ ..+++++|++|+..++. ... ++..|+
T Consensus 65 ~~p~~~~l~~----~la~l~g~~-----------~~~~~~sG~~Ai~~~~~-----l~~---------------~gd~Vi 109 (400)
T 3nmy_A 65 HNPTRFAYER----CVAALEGGT-----------RAFAFASGMAATSTVME-----LLD---------------AGSHVV 109 (400)
T ss_dssp CCHHHHHHHH----HHHHHHTCS-----------EEEEESSHHHHHHHHHT-----TSC---------------TTCEEE
T ss_pred CCHHHHHHHH----HHHHHhCCC-----------CEEEecCHHHHHHHHHH-----HcC---------------CCCEEE
Confidence 3455555555 567777764 35788888988765321 111 122577
Q ss_pred ecCCcchhHHHHHHh-----CCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHH
Q psy13453 636 TSDQSNSSVEKSAII-----GDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPIC 710 (764)
Q Consensus 636 ~S~~aH~Sv~kAa~~-----lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~ 710 (764)
++...|.+....+.. .|+.++.++.+ |+++|+++|++. +.+|++...++.+|.+.|+++|+++|
T Consensus 110 ~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~------~~~v~~e~~~np~G~~~~l~~i~~la 178 (400)
T 3nmy_A 110 AMDDLYGGTFRLFERVRRRTAGLDFSFVDLT-----DPAAFKAAIRAD------TKMVWIETPTNPMLKLVDIAAIAVIA 178 (400)
T ss_dssp EESSCCHHHHHHHHHTHHHHHCCEEEEECTT-----SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred EeCCCchHHHHHHHHhhHhhcCeEEEEECCC-----CHHHHHHHhccC------CCEEEEECCCCCCCeeecHHHHHHHH
Confidence 888888866665443 48888888875 799999998653 45888888999999999999999999
Q ss_pred HhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc
Q psy13453 711 QEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF 758 (764)
Q Consensus 711 ~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~ 758 (764)
++||++++||.+|+.+....+. . . .+|.++.++||+++.|.
T Consensus 179 ~~~g~~livDe~~~~~~~~~~~-~---~---g~div~~S~sK~l~g~g 219 (400)
T 3nmy_A 179 RKHGLLTVVDNTFASPMLQRPL-S---L---GADLVVHSATKYLNGHS 219 (400)
T ss_dssp HHTTCEEEEECTTTHHHHCCGG-G---G---TCSEEEEETTTTTTCSS
T ss_pred HHcCCEEEEECCCcccccCChh-h---c---CCcEEEecCccccCCCC
Confidence 9999999999999865443321 1 1 36999999999999873
No 194
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.10 E-value=5.8e-10 Score=120.67 Aligned_cols=161 Identities=12% Similarity=0.055 Sum_probs=111.2
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
++.+.+++++|.+.+ ..+||+|+|+++..++.+. +. ..|++..-+|.+..
T Consensus 63 ~l~~~la~~~~~~~~---------~v~~~~g~~~al~~~~~~~-----~g----------------d~vl~~~p~y~~~~ 112 (364)
T 1lc5_A 63 HLHQALARHHQVPAS---------WILAGNGETESIFTVASGL-----KP----------------RRAMIVTPGFAEYG 112 (364)
T ss_dssp HHHHHHHHHHTSCGG---------GEEEESSHHHHHHHHHHHH-----CC----------------SEEEEEESCCTHHH
T ss_pred HHHHHHHHHHCcCHH---------HEEECCCHHHHHHHHHHHc-----CC----------------CeEEEeCCCcHHHH
Confidence 445566666677643 5789999999998887755 11 13667778899999
Q ss_pred HHHHhCCCceEEEecCCCCcccH-HHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHHHHHHHhcCCEEEEec
Q psy13453 646 KSAIIGDVPVRQLRSDDNGVLRG-DALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEELGPICQEYNIWLHVDA 721 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~~g~md~-~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eIa~i~~~~glwLHVDa 721 (764)
.++...|.+++.+|.+.+..+++ +++.+.+. ..+-+|+.+..++.+|.+-| +++|+++|++||+|+++|.
T Consensus 113 ~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~------~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 186 (364)
T 1lc5_A 113 RALAQSGCEIRRWSLREADGWQLTDAILEALT------PDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDE 186 (364)
T ss_dssp HHHHHTTCEEEEEECCGGGTTCCCTTHHHHCC------TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHcCCeEEEEeCCcccccchhHHHHHhcc------CCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEEC
Confidence 99999999999999875323443 43333321 12446677778889999877 9999999999999999999
Q ss_pred cccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 722 AYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 722 A~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+|+.+..-.......+ +....|-+..++||+++.| +.+|++
T Consensus 187 ~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~ 228 (364)
T 1lc5_A 187 AFIDFIPHETGFIPAL-KDNPHIWVLRSLTKFYAIPGLRLGYL 228 (364)
T ss_dssp TTGGGSTTCCCSGGGC-TTCTTEEEEEESTTTTTCTTTCCEEE
T ss_pred cChhhccCccchhhHh-ccCCCEEEEEECchhhcCCccceEEE
Confidence 9987543111111111 1123477889999999755 345665
No 195
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.10 E-value=5e-10 Score=120.98 Aligned_cols=157 Identities=13% Similarity=-0.034 Sum_probs=112.2
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
++.+++++++|.+.+ ..+||+|||+++..++.+.. . +...|++..-+|.+..
T Consensus 69 ~lr~~la~~~g~~~~---------~i~~t~g~~~al~~~~~~l~----~---------------~gd~Vl~~~p~~~~~~ 120 (360)
T 3hdo_A 69 KLREVAGELYGFDPS---------WIIMANGSDEVLNNLIRAFA----A---------------EGEEIGYVHPSYSYYG 120 (360)
T ss_dssp HHHHHHHHHHTCCGG---------GEEEESSHHHHHHHHHHHHC----C---------------TTCEEEEESSSCTHHH
T ss_pred HHHHHHHHHhCcCcc---------eEEEcCCHHHHHHHHHHHHh----C---------------CCCEEEEcCCChHHHH
Confidence 456677777786553 68999999999988876431 1 1124778889999999
Q ss_pred HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccccc
Q psy13453 646 KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAYAG 725 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~Gg 725 (764)
.++...|.+++.+|.++++.+ ++|++.+ .+-+|+.+..++.+|.+-|+++|.++|+++|+|+++|.+|+.
T Consensus 121 ~~~~~~g~~~~~v~~~~~~~~--~~l~~~~--------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~ 190 (360)
T 3hdo_A 121 TLAEVQGARVRTFGLTGDFRI--AGFPERY--------EGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAE 190 (360)
T ss_dssp HHHHHHTCEEEEECBCTTSSB--TTCCSSB--------CSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGG
T ss_pred HHHHHCCCEEEEeeCCCCCCH--HHHHhhc--------CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHh
Confidence 999999999999999887777 4433221 133777788899999999999999999999999999999986
Q ss_pred cccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 726 SALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 726 ~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+.-- ........ ...+-+..++||+++.| ..+|++
T Consensus 191 ~~~~--~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~ 226 (360)
T 3hdo_A 191 FAES--NALELVRR-HENVVVTRTLSKSYSLAGMRIGLA 226 (360)
T ss_dssp GSSC--CCTHHHHH-CSSEEEEEESTTTTSCTTSCCEEE
T ss_pred hCCc--chhHHhcc-CCCEEEEecchHhhcCCccceeeE
Confidence 3110 11111111 12246677999998744 455654
No 196
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.09 E-value=3.4e-09 Score=112.74 Aligned_cols=157 Identities=13% Similarity=0.035 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS 643 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S 643 (764)
..++.+.+++++|.+++ ..+||+|+|+++..++.+. + +..|+++.-+|.+
T Consensus 53 ~~~lr~~la~~~~~~~~---------~i~~t~G~~~~l~~~~~~~-----~----------------gd~vl~~~p~~~~ 102 (337)
T 3p1t_A 53 EPRVMRKLAEHFSCPED---------NLMLVRGIDECFDRISAEF-----S----------------SMRFVTAWPGFDG 102 (337)
T ss_dssp HHHHHHHHHHHHTSCGG---------GEEEESHHHHHHHHHHHHS-----T----------------TSEEEEESSSCSH
T ss_pred hHHHHHHHHHHhCcCHH---------HEEEeCCHHHHHHHHHHhc-----C----------------CCeEEEeCCCcHH
Confidence 34566677788887653 6799999999987766543 1 1247788899999
Q ss_pred HHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEeccc
Q psy13453 644 VEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDAAY 723 (764)
Q Consensus 644 v~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDaA~ 723 (764)
...++...|++++.+|.++++.+|+++|+++. .+.+|+.+..++.+|.+-|+++|.++|+++++ +++|.||
T Consensus 103 ~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~--------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~ 173 (337)
T 3p1t_A 103 YRARIAVSGLRHFEIGLTDDLLLDPNDLAQVS--------RDDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETY 173 (337)
T ss_dssp HHHHHTTSCCEEEEECBCTTSSBCHHHHTTCC--------TTEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTT
T ss_pred HHHHHHHcCCEEEEecCCCCCCCCHHHHHhhc--------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCC
Confidence 99999999999999999988999999998751 24588888899999999999999999999997 5669999
Q ss_pred cccccccchhhhhhcCCCcccEEEEcCCccCC-CCcCceee
Q psy13453 724 AGSALLLPEYAHLKRGLEYVDSFDFNTHKWLL-VNFDCSAM 763 (764)
Q Consensus 724 Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~-~P~~~g~l 763 (764)
+.+....+ ...+....+-+..++||+++ ....+|++
T Consensus 174 ~~~~~~~~----~~~~~~~~~i~~~S~sK~~g~~G~r~G~~ 210 (337)
T 3p1t_A 174 VDYSSFRA----RGLAYGENELVFRSFSKSYGLAGLRLGAL 210 (337)
T ss_dssp GGGSSCSS----SCCCCBTTEEEEEESSSTTCCTTTCCEEE
T ss_pred hhhccccc----cccccCCCEEEEeeCchhccCcchheEEE
Confidence 86322111 11122344778899999997 44556654
No 197
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.08 E-value=9e-10 Score=123.69 Aligned_cols=223 Identities=11% Similarity=0.058 Sum_probs=153.6
Q ss_pred eeHHHHHhhcCCCCCC--eEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 22 YESFKATHSLSGTPDQ--VRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 22 YSv~KAa~~LGl~~~~--v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
|.+.++++..|+.... +..+|.++++.+|+++|+++|++... ++-+++-+.++.++|.+.|+++|.+ ++++
T Consensus 170 ~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~--~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~v 247 (465)
T 3e9k_A 170 YAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGD--SIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYV 247 (465)
T ss_dssp HHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGG--GEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCC--CeEEEEEeCcccCcceeecHHHHHHHHHHcCCEE
Confidence 5577788999988633 45668888999999999999986421 1223467888999999999999886 8999
Q ss_pred eecccc--------------------cccc------c-eeeeecCCC--cccccccc---c-----cccC-Cc-------
Q psy13453 95 KVGGVL--------------------RRVY------S-SCLVPRGQK--SLRTTVLF---H-----FLFQ-HW------- 129 (764)
Q Consensus 95 HVDa~l--------------------~~~y------~-s~ll~rd~~--~l~~~~s~---~-----~d~~-d~------- 129 (764)
++|++. ++++ + ++++.+.+. .+...+.. + +.+. .+
T Consensus 248 i~D~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 327 (465)
T 3e9k_A 248 GFDLAHAVGNVELYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVC 327 (465)
T ss_dssp EEECTTTTTTSCCCHHHHTCCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGG
T ss_pred EEEhhhhcCCcCCchhhcCCCEEEECcccccccCCCceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChH
Confidence 999742 1121 1 233333211 01000000 0 0000 01
Q ss_pred ccCCCC--cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcC----------CCeEEeCCCC----ceeEEEEe
Q psy13453 130 QIPLGR--RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQD----------DRFELVCPPS----MGLVCFRL 193 (764)
Q Consensus 130 tle~SR--r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~----------p~~ell~~P~----l~iV~Fry 193 (764)
.++.+- -...+.+++++..+...|+.++.++..++++++.+.|++. ++++++.+.+ .++++|++
T Consensus 328 ~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~ 407 (465)
T 3e9k_A 328 GFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITF 407 (465)
T ss_dssp GGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEE
T ss_pred HhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEe
Confidence 111111 2235678999999988899999999999999999999985 8999987653 67888976
Q ss_pred eccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 194 KVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 194 ~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
.. .. .++.++|.++|.+.. ..++.++|+++++..++.++++.+++.|+++.++
T Consensus 408 ~~---------------~~----~~l~~~L~~~Gi~v~----~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~ 460 (465)
T 3e9k_A 408 SV---------------PN----KDVFQELEKRGVVCD----KRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDS 460 (465)
T ss_dssp CC---------------TT----CCHHHHHHTTTEECE----EETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC
T ss_pred cC---------------CH----HHHHHHHHHCCEEEe----cCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHh
Confidence 31 11 257788888997543 4456789999889999999999999999887643
No 198
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.08 E-value=1.9e-09 Score=115.89 Aligned_cols=223 Identities=9% Similarity=-0.050 Sum_probs=144.1
Q ss_pred eeeeHHHHHhhc---CCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----C
Q psy13453 20 LIYESFKATHSL---SGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----N 91 (764)
Q Consensus 20 ~~YSv~KAa~~L---Gl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~ 91 (764)
.|+|+..++.++ |... +.||+++++.+|+++|+++|+++ +-+++.+.+++++|.+.|++++.+ +
T Consensus 97 ~~~~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~~~~i~~l~~~~~ 168 (382)
T 4hvk_A 97 EHMSVINPAKFLQKQGFEV---EYIPVGKYGEVDVSFIDQKLRDD-----TILVSVQHANNEIGTIQPVEEISEVLAGKA 168 (382)
T ss_dssp CCHHHHHHHHHHHHTTCEE---EEECBCTTSCBCHHHHHHHCCTT-----EEEEECCSBCTTTCBBCCHHHHHHHHSSSS
T ss_pred CcHHHHHHHHHHHhcCCEE---EEeccCCCCCcCHHHHHHHhccC-----ceEEEEECCCCCceeeCCHHHHHHHHHHcC
Confidence 577888877775 7665 99999999999999999999753 224468889999999999999876 8
Q ss_pred CCceeccccccc---------------------c----ceeeeecCCCccccccccccccCCccc-CCCCc-ccHHHHHH
Q psy13453 92 GPLKVGGVLRRV---------------------Y----SSCLVPRGQKSLRTTVLFHFLFQHWQI-PLGRR-FRALKLWM 144 (764)
Q Consensus 92 ~wlHVDa~l~~~---------------------y----~s~ll~rd~~~l~~~~s~~~d~~d~tl-e~SRr-~~ALklWa 144 (764)
+ +++|++.... + .++++.++...+...+.. ... .... .++-. .....+.+
T Consensus 169 ~-li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~ 245 (382)
T 4hvk_A 169 A-LHIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEAKLQPVILG-GGQ-ENGLRSGSENVPSIVGFGK 245 (382)
T ss_dssp E-EEEECTTTBTTBCCCHHHHTCSEEEEESGGGTSCTTCEEEEEETTCCCCCSSCS-SCT-GGGTSCSCCCHHHHHHHHH
T ss_pred E-EEEEhHHhcCCCCCCchhcCCCEEEEeHHHhcCCCceEEEEEcCccCcCccccc-CCC-cCccccCCcCHHHHHHHHH
Confidence 8 9999953111 0 012222221111100000 000 0000 01111 11223334
Q ss_pred HHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC---ceeEEEEeeccccccccccccCccCCccHHHHHHHH
Q psy13453 145 TLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS---MGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYD 221 (764)
Q Consensus 145 tL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~---l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~ 221 (764)
++. +..+++.++.++..++++++.+.|++.|++++..++. .++++|++.. .+ ..++.+
T Consensus 246 al~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~--~~~~~~ 306 (382)
T 4hvk_A 246 AAE-ITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSY----------------IE--GESIVL 306 (382)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETT----------------CC--HHHHHH
T ss_pred HHH-HHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECC----------------CC--HHHHHH
Confidence 444 4467899999999999999999999999999887654 3578887631 11 146778
Q ss_pred HHHhcCcEEEEeceeC-------------C------eeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHcc
Q psy13453 222 RIIARKVIYIVKGSFQ-------------D------RLFMRFAICSSQTEESDVQLGWNEIRTATEEVLRG 273 (764)
Q Consensus 222 ~L~~~G~~~vs~t~l~-------------g------~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~~ 273 (764)
.|.++|..+....... + ..++|+++. +.+++++++.+++.|+++.+++.+.
T Consensus 307 ~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~-~~~t~e~i~~~~~~l~~~~~~~~~~ 376 (382)
T 4hvk_A 307 SLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLG-RYNTDEDVDRLLEVLPGVIERLRSM 376 (382)
T ss_dssp HHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcC-CCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 8888887433211000 0 468999765 4567899999999999998877653
No 199
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.08 E-value=8.9e-09 Score=115.35 Aligned_cols=228 Identities=9% Similarity=-0.068 Sum_probs=138.5
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCCccccccCCCCChHHHHHHHHHHhh---cccCccccCCchHHHHHHHHHHHHHHHcCC
Q psy13453 501 DWRHIMRDMNTVIMPGITHWQSPQFNAYFPTGSSYPSIVGDMLSGAF---GLIGFSWLSSPACTELEVLVMNWLGKALGL 577 (764)
Q Consensus 501 ~~~~il~~l~~~i~~~~~~~~~P~~~~~~~~~~~~~~~lad~l~~~l---N~n~~~~~~sp~~t~lE~~v~~~la~llG~ 577 (764)
..-.+.+.++..-.+...+..-..|+++-..+....++ .+.+.... +.....|.......++.+.+.+|+ +|.
T Consensus 35 ~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av-~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l---~g~ 110 (448)
T 3meb_A 35 AILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAV-KEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLM---FGK 110 (448)
T ss_dssp TTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHH-HHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHH---HCT
T ss_pred hHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHH-HHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHh---cCC
Confidence 34555556655433333344445555655444444433 33322222 112223333334445555555554 365
Q ss_pred CccccCCCCCCCcEEE--eCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHH----hC
Q psy13453 578 PEEFLNCSPGPGGGII--QSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAI----IG 651 (764)
Q Consensus 578 p~~~~~~~~~~~~Gvf--TsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~----~l 651 (764)
+.... .....+| |+|||+|+..+....... .+ ...|++++-+|.+....+. ..
T Consensus 111 ~~~~~----~~~~i~~~~t~ggt~al~l~~~~~~~~-~~----------------gd~Vlv~~p~~~~~~~~~~~~~~~~ 169 (448)
T 3meb_A 111 DSKAA----QEGRIASCQSLSGTGSLHIGFEFLHLW-MP----------------KAEFYMPSTTWPNHYGIYDKVFNKL 169 (448)
T ss_dssp TCHHH----HTTCEEEEEESHHHHHHHHHHHHHHHH-CT----------------TCCEEEESSCCTHHHHHHHHHHCTT
T ss_pred Ccccc----CcCcEEEEECCcHHHHHHHHHHHHHHh-CC----------------CCEEEECCCCCHhHHHHHHhhHHhC
Confidence 41000 0135778 999999987754332211 11 1247888899999999999 89
Q ss_pred CCceEEEec-CCC--CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc---cHHHHHHHHHhcCCEEEEeccccc
Q psy13453 652 DVPVRQLRS-DDN--GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD---NLEELGPICQEYNIWLHVDAAYAG 725 (764)
Q Consensus 652 Gl~v~~Vp~-d~~--g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD---pl~eIa~i~~~~glwLHVDaA~Gg 725 (764)
|.+++.+|. |++ +.+|+++|+++|++. .....+|+.+..++.+|.+- ++++|+++|++||+++++|.||++
T Consensus 170 G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~---~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~ 246 (448)
T 3meb_A 170 KVPYKEYTYLRKDGELEIDFSNTKKDIQSA---PEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQG 246 (448)
T ss_dssp TSCCEEECCBCTTSCSSBCHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTT
T ss_pred CCeEEEEeccccccCCCcCHHHHHHHHHhC---CCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEeccccc
Confidence 999999998 664 899999999999762 12356777788899999885 466699999999999999999987
Q ss_pred ccccc-----chhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 726 SALLL-----PEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 726 ~~l~~-----~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
+..-. ...+.... ...-.-++.++||.++.|
T Consensus 247 ~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~ 282 (448)
T 3meb_A 247 FATGSFEADAFAVRMFVD-AGVEVLVAQSFSKNFGLY 282 (448)
T ss_dssp TSSSCHHHHTHHHHHHHH-TTCCEEEEEECTTTSCCG
T ss_pred ccCCCcccCchhHHHHhh-cCCcEEEEecccccCCCc
Confidence 54321 01111111 111134588999988744
No 200
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.08 E-value=7.7e-10 Score=121.15 Aligned_cols=224 Identities=10% Similarity=0.026 Sum_probs=152.7
Q ss_pred eeee--HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CC
Q psy13453 20 LIYE--SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NG 92 (764)
Q Consensus 20 ~~YS--v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~ 92 (764)
.||| +.++++..|... +.||++.++.+|+++|+++|++. ++-+++.+.+++++|.+.|++++++ ++
T Consensus 95 ~~~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~i~~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~ 167 (416)
T 3isl_A 95 GRFGYLLTEIAERYGANV---HMLECEWGTVFDPEDIIREIKKV----KPKIVAMVHGETSTGRIHPLKAIGEACRTEDA 167 (416)
T ss_dssp SHHHHHHHHHHHHTTCEE---EEEECCTTCCCCHHHHHHHHHHH----CCSEEEEESEETTTTEECCCHHHHHHHHHTTC
T ss_pred CcccHHHHHHHHhcCCee---EEEecCCCCCCCHHHHHHHHhhC----CCcEEEEEccCCCCceecCHHHHHHHHHHcCC
Confidence 4677 888999999876 99999999999999999999853 1235567788999999999999886 89
Q ss_pred Cceeccccc--------------------cc--cc----eeeeecCCCccccccc-----------------------cc
Q psy13453 93 PLKVGGVLR--------------------RV--YS----SCLVPRGQKSLRTTVL-----------------------FH 123 (764)
Q Consensus 93 wlHVDa~l~--------------------~~--y~----s~ll~rd~~~l~~~~s-----------------------~~ 123 (764)
|+++|+... ++ ++ ++++.++. .... +. ..
T Consensus 168 ~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~~-~~~~-~~~~~~~~~Gw~~~~~~~~~~gg~~~~ 245 (416)
T 3isl_A 168 LFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCLSVPSGMAPITYNER-VADV-IAARKKVERGIATQADRAALSGNRPIT 245 (416)
T ss_dssp EEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCCCSSEEEEEECHH-HHHH-HHTC------------------CCCCS
T ss_pred EEEEECCccccCCCcchhhcCCCEEEecCccccCCCCCeEEEEECHH-HHHH-hhccccccccccccccchhccCCCCCC
Confidence 999998531 11 00 22222211 0000 00 00
Q ss_pred ccc----------CCccc-CCCC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC---cee
Q psy13453 124 FLF----------QHWQI-PLGR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS---MGL 188 (764)
Q Consensus 124 ~d~----------~d~tl-e~SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~---l~i 188 (764)
..+ ....+ .++. ......+++++..+...|+.++.++..++++++.+.|++. +++++.++. .++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~ 324 (416)
T 3isl_A 246 SNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAM-GLRLFGDDSCKMPVV 324 (416)
T ss_dssp CSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCTTE
T ss_pred ccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCccccCCcE
Confidence 000 01111 1222 2233466788888888889999999999999999999995 888876654 467
Q ss_pred EEEEeeccccccccccccCccCCccHHHHHHHHHHHhc-CcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 189 VCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIAR-KVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 189 V~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~-G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
++|++. . ..+ ..++.++|.++ |........-.+..++|+++....|++++++.+++.|+++.
T Consensus 325 ~~~~~~-~--------------~~~--~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~ 387 (416)
T 3isl_A 325 TCVEIP-G--------------GID--GESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVL 387 (416)
T ss_dssp EEEECC-T--------------TCC--HHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred EEEeCC-C--------------CCC--HHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHH
Confidence 788753 1 111 24678888776 86443222222356899998777888888999999999987
Q ss_pred HHH
Q psy13453 268 EEV 270 (764)
Q Consensus 268 ~~i 270 (764)
+++
T Consensus 388 ~~~ 390 (416)
T 3isl_A 388 LRH 390 (416)
T ss_dssp HHT
T ss_pred HHc
Confidence 664
No 201
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.08 E-value=5.1e-10 Score=122.58 Aligned_cols=156 Identities=17% Similarity=0.068 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC-
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ- 639 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~- 639 (764)
..+|+.+.+++++++|.++. ...++|+|||+++..++.+. +. + .|+++..
T Consensus 57 ~~~~~~~~~~~a~~~g~~~~--------~~~~~~~ggt~a~~~~~~~~-----~g---------------d-~Vl~~~~~ 107 (374)
T 2aeu_A 57 SYFAEKVNEYGLKHLGGDEN--------DKCVGFNRTSSAILATILAL-----KP---------------K-KVIHYLPE 107 (374)
T ss_dssp HHHHHHHHHHHHHHHTCCTT--------EEEEEESSHHHHHHHHHHHH-----CC---------------S-EEEEECSS
T ss_pred hHHHHHHHHHHHHHhCCCCc--------ceEEEEcChHHHHHHHHHhC-----CC---------------C-EEEEecCC
Confidence 35667788888899988311 24689999999998888754 21 1 3455555
Q ss_pred --cchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceE-EEEeeccCCcc-ccccHHHHHHHHHhcCC
Q psy13453 640 --SNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCC-LIATLGTTGTC-AFDNLEELGPICQEYNI 715 (764)
Q Consensus 640 --aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~-VvataGTT~~G-aiDpl~eIa~i~~~~gl 715 (764)
.|+++.+++...|..++.+ +|+++|+++ .+ .+-+ |+.+..++.+| ...++++|+++|++||+
T Consensus 108 y~~~~~~~~~~~~~g~~~~~v-------~d~~~l~~~-~~------~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~ 173 (374)
T 2aeu_A 108 LPGHPSIERSCKIVNAKYFES-------DKVGEILNK-ID------KDTLVIITGSTMDLKVIELENFKKVINTAKNKEA 173 (374)
T ss_dssp SSCCTHHHHHHHHTTCEEEEE-------SCHHHHHTT-CC------TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTC
T ss_pred CCccHHHHHHHHHcCcEEEEe-------CCHHHHHhc-CC------CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCC
Confidence 5777767788889988777 378888776 21 2446 77777888899 89999999999999999
Q ss_pred EEEEeccccccccccchhhh-hhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 716 WLHVDAAYAGSALLLPEYAH-LKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 716 wLHVDaA~Gg~~l~~~~~r~-~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
++|+|.+|+.+.. .+.... .+. + .+|.++.++||+++.| ..|++
T Consensus 174 ~li~De~~~~~~~-~~~~~~~~~~-~-~~di~~~S~sK~l~g~-~~G~~ 218 (374)
T 2aeu_A 174 IVFVDDASGARVR-LLFNQPPALK-L-GADLVVTSTDKLMEGP-RGGLL 218 (374)
T ss_dssp CEEEECTTHHHHH-HHTTCCCHHH-H-TCSEEEEETTSSSSSC-SCEEE
T ss_pred EEEEECCcccccc-cccccCCccc-c-CCcEEEecCcccccCc-ceEEE
Confidence 9999999987531 011110 111 1 3489999999998754 77765
No 202
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.07 E-value=7.3e-10 Score=120.03 Aligned_cols=160 Identities=13% Similarity=0.001 Sum_probs=114.2
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc-eEEEecCCcchhH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK-LVAYTSDQSNSSV 644 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~-~vi~~S~~aH~Sv 644 (764)
++.+.+++++|.+++ ..++|+|+|+++..++.+... ++ ..|+++.-+|.+.
T Consensus 62 ~lr~~la~~~~~~~~---------~v~~~~G~~~ai~~~~~~~~~-------------------~g~d~Vl~~~p~~~~~ 113 (356)
T 1fg7_A 62 AVIENYAQYAGVKPE---------QVLVSRGADEGIELLIRAFCE-------------------PGKDAILYCPPTYGMY 113 (356)
T ss_dssp HHHHHHHHHHTSCGG---------GEEEESHHHHHHHHHHHHHCC-------------------TTTCEEEECSSSCTHH
T ss_pred HHHHHHHHHhCCChH---------HEEEcCCHHHHHHHHHHHHhC-------------------CCCCEEEEeCCChHHH
Confidence 455566777787653 578999999998877765421 11 2577888899999
Q ss_pred HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHH---HHHHHhcCCEEEEec
Q psy13453 645 EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEEL---GPICQEYNIWLHVDA 721 (764)
Q Consensus 645 ~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eI---a~i~~~~glwLHVDa 721 (764)
..++...|.+++.+|.++++.+|+++|+++++ . +-+|+.+..++.+|.+-|.++| +++|+ +|+++++|.
T Consensus 114 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De 185 (356)
T 1fg7_A 114 SVSAETIGVECRTVPTLDNWQLDLQGISDKLD-G------VKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADE 185 (356)
T ss_dssp HHHHHHHTCEEEECCCCTTSCCCHHHHHTSCT-T------EEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEEC
T ss_pred HHHHHHcCCEEEEeeCCCCCCCCHHHHHHHhc-C------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEc
Confidence 99999999999999998888999999998875 2 3477778889999999665555 55566 999999999
Q ss_pred cccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 722 AYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 722 A~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+|+.+.. .......... ...+-+..++||+++.| ..+|.+
T Consensus 186 ~~~~~~~-~~~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~ 226 (356)
T 1fg7_A 186 AYIEFCP-QASLAGWLAE-YPHLAILRTLSKAFALAGLRCGFT 226 (356)
T ss_dssp TTGGGSG-GGCSGGGTTT-CTTEEEEEESSSTTCCGGGCCEEE
T ss_pred cchhhcC-CCcHHHHHhh-CCCEEEEecchHhhcCchhhhEEE
Confidence 9987541 1111111111 12367788999998743 235654
No 203
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.07 E-value=9.1e-10 Score=122.31 Aligned_cols=167 Identities=16% Similarity=0.127 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+++++++|.+ ..+||+|||+||..++.+++.....+ +..+ ++-+|+.+...|
T Consensus 99 ~~~~~l~~~la~~~g~~-----------~v~~~~ggteA~~~al~~~~~~~~~~-~~~g---------~~~vi~~~~~yh 157 (420)
T 2pb2_A 99 EPALRLGRKLIDATFAE-----------RVLFMNSGTEANETAFKLARHYACVR-HSPF---------KTKIIAFHNAFH 157 (420)
T ss_dssp HHHHHHHHHHHHHSSCS-----------EEEEESSHHHHHHHHHHHHHHHHHHH-TCTT---------CCEEEEETTCCC
T ss_pred HHHHHHHHHHHhhCCCC-----------eEEEeCCHHHHHHHHHHHHHHHhhhc-cCCC---------CCEEEEEeCCcC
Confidence 45566777888888742 47899999999999999988643221 1000 123566667778
Q ss_pred hhHHHHHHhCCCc------------eEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccc----cccHHH
Q psy13453 642 SSVEKSAIIGDVP------------VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCA----FDNLEE 705 (764)
Q Consensus 642 ~Sv~kAa~~lGl~------------v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Ga----iDpl~e 705 (764)
.+...++...|.. +..+|.+ |+++|+++|++. +.+|+++..++..|. .+++++
T Consensus 158 ~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~-----d~~~le~~i~~~------~~~vi~~p~~~~gG~~~~~~~~l~~ 226 (420)
T 2pb2_A 158 GRSLFTVSVGGQPKYSDGFGPKPADIIHVPFN-----DLHAVKAVMDDH------TCAVVVEPIQGEGGVQAATPEFLKG 226 (420)
T ss_dssp CSSHHHHHHSSCHHHHTTSSSCCSCEEEECTT-----CHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHH
T ss_pred CcCHHHHHhcCCccccccCCCCCCCeEEecCC-----CHHHHHHHhccC------ceEEEEeCCcCCCCeecCCHHHHHH
Confidence 7777777666643 5566643 799999988642 446666555554554 479999
Q ss_pred HHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 706 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 706 Ia~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
|+++|++||++|++|.+|.+.......+.....|+ ..|.++ ++|+++..+.+|++
T Consensus 227 l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~-~~diit--~sK~l~~G~~iG~~ 281 (420)
T 2pb2_A 227 LRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGV-TPDILT--SAKALGGGFPVSAM 281 (420)
T ss_dssp HHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEE--ECGGGGTTSCCEEE
T ss_pred HHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCC-CCCeEE--ecccccCCCceEEE
Confidence 99999999999999999976322111111112244 368775 47999876667765
No 204
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.07 E-value=1.1e-09 Score=119.62 Aligned_cols=167 Identities=15% Similarity=0.043 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
...++.+++++++|. + ..+||+|||+||..++.+++.......+.. .++..|++...+|+
T Consensus 79 ~~~~l~~~la~~~g~-~----------~v~~~~~gt~a~~~al~~~~~~~~~~~~~~---------~~~~~vi~~~~~~~ 138 (392)
T 3ruy_A 79 QLGPWYEKVAKLTNK-E----------MVLPMNTGAEAVETAIKTARRWAYDVKKVE---------ANRAEIIVCEDNFH 138 (392)
T ss_dssp THHHHHHHHHHHHTC-S----------EEEEESSHHHHHHHHHHHHHHHHHHTSCCC---------TTCCEEEEETTCCC
T ss_pred HHHHHHHHHHHhcCC-C----------EEEEeCcHHHHHHHHHHHHHHhhhhccCCC---------CCCcEEEEEcCCcC
Confidence 345566788888883 2 478999999999999998876522111100 11224555555554
Q ss_pred hHH-HHHHhCCC------------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc----HHH
Q psy13453 643 SVE-KSAIIGDV------------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN----LEE 705 (764)
Q Consensus 643 Sv~-kAa~~lGl------------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp----l~e 705 (764)
+.. .+....+. .+..++.+ |+++|+++|+++ +.+|+.+..++.+|.+-| +++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~~l~~ 207 (392)
T 3ruy_A 139 GRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYG-----DLEALKAAITPN------TAAFILEPIQGEAGINIPPAGFLKE 207 (392)
T ss_dssp CSSHHHHHTCSCTTTTTTCCSCCSSEEEECTT-----CHHHHHHHCCTT------EEEEEECSSBSTTTSBCCCTTHHHH
T ss_pred CCCHhhhhccCChhhccccCCCCCCCeeeCcc-----cHHHHHHHhccC------eEEEEEeCccCCCCCccCCHHHHHH
Confidence 443 33333221 24444432 799999998633 458888888999999998 999
Q ss_pred HHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 706 LGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 706 Ia~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
|+++|++||+++|+|.+|++.............++ ..|.++++ |.++.- +..|++
T Consensus 208 i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~~~S--K~l~gG~~~~G~~ 263 (392)
T 3ruy_A 208 ALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNV-TPDMYILG--KALGGGVFPISCA 263 (392)
T ss_dssp HHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTTSCCEEE
T ss_pred HHHHHHHcCCEEEEeechhCCCccccchhhhccCC-CCCEEEEc--hhhhCChhhhEEE
Confidence 99999999999999999975322111111222233 45888876 976542 345554
No 205
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.06 E-value=5.5e-10 Score=123.76 Aligned_cols=180 Identities=12% Similarity=0.001 Sum_probs=128.1
Q ss_pred cccCCchHHHHHHHHHHHHHHHc-CCCccccCCCCCCCc---EEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccc
Q psy13453 553 SWLSSPACTELEVLVMNWLGKAL-GLPEEFLNCSPGPGG---GIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDI 628 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~ll-G~p~~~~~~~~~~~~---GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~ 628 (764)
.|.......++++.+.+|+.+.. +.++ .. .++|+|||+++..++.+..+
T Consensus 83 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~---------~~~~~i~~t~g~~~al~~~~~~l~~------------------ 135 (430)
T 2x5f_A 83 PYAPPQGIEELRDLWQQKMLRDNPELSI---------DNMSRPIVTNALTHGLSLVGDLFVN------------------ 135 (430)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHCTTCCG---------GGBCCCEEESHHHHHHHHHHHHHCC------------------
T ss_pred ccCCCCCCHHHHHHHHHHHhccCcccCC---------CccceEEEcCCchHHHHHHHHHHhC------------------
Confidence 34333346778888888887663 3333 34 78999999999888765421
Q ss_pred cCceEEEecCCcchhHHHHHHh-CCCceEEEecCC-CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---H
Q psy13453 629 RNKLVAYTSDQSNSSVEKSAII-GDVPVRQLRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---L 703 (764)
Q Consensus 629 ~~~~vi~~S~~aH~Sv~kAa~~-lGl~v~~Vp~d~-~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l 703 (764)
++..|++..-+|.+....+.. .|.+++.+|.++ ++.+|+++|+++|++. +..+.+|+.+..++.+|.+-+ +
T Consensus 136 -~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l 211 (430)
T 2x5f_A 136 -QDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSY---NKDKVIMILNYPNNPTGYTPTHKEV 211 (430)
T ss_dssp -TTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHC---CSSEEEEEECSSCTTTCCCCCHHHH
T ss_pred -CCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhc---CCCCEEEEEcCCCCCCCCcCCHHHH
Confidence 112477788899999999998 999999999875 4789999999999752 223557777888999999977 8
Q ss_pred HHHHHHHHh-----cCCEEEEeccccccccccc---hhhhhhcCCCcc---cEEEEcCCccCCCC-cCceee
Q psy13453 704 EELGPICQE-----YNIWLHVDAAYAGSALLLP---EYAHLKRGLEYV---DSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 704 ~eIa~i~~~-----~glwLHVDaA~Gg~~l~~~---~~r~~l~gie~a---DSit~d~HK~l~~P-~~~g~l 763 (764)
++|+++|++ ||+++++|.+|+.+..-.. .....+.+.... +-+..++||+++.| +.+|++
T Consensus 212 ~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~ 283 (430)
T 2x5f_A 212 TTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFM 283 (430)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEE
T ss_pred HHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEE
Confidence 999999999 9999999999987543211 111022232223 45578999999755 235654
No 206
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.05 E-value=2.6e-09 Score=117.75 Aligned_cols=174 Identities=13% Similarity=0.044 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+.++++++-+. ....+||+|||+|+..++..||... . ++-+++.+...|
T Consensus 84 ~~~~~l~~~la~~~~~~~--------~~~v~~~~g~~~a~~~~~~~a~~~~-~---------------~~~vi~~~p~y~ 139 (426)
T 1sff_A 84 EPYLELCEIMNQKVPGDF--------AKKTLLVTTGSEAVENAVKIARAAT-K---------------RSGTIAFSGAYH 139 (426)
T ss_dssp HHHHHHHHHHHHHSSCSS--------CEEEEEESSHHHHHHHHHHHHHHHH-T---------------CCEEEEETTCCC
T ss_pred HHHHHHHHHHHHhCCccc--------ccEEEEeCchHHHHHHHHHHHHHhh-C---------------CCeEEEECCCcC
Confidence 345566777888873121 0257899999999999998776432 1 123566777888
Q ss_pred hhHHHHHHhCCCc-------------eEEEecCC-----CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc-
Q psy13453 642 SSVEKSAIIGDVP-------------VRQLRSDD-----NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN- 702 (764)
Q Consensus 642 ~Sv~kAa~~lGl~-------------v~~Vp~d~-----~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp- 702 (764)
.+...++...|.. ++.+|.+. ++.+|+++|+++|++.. .+..+.+|+++.-.+++|.+.+
T Consensus 140 ~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~v~~~p~~~ntG~~~~~ 218 (426)
T 1sff_A 140 GRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDA-APEDIAAIVIEPVQGEGGFYASS 218 (426)
T ss_dssp CSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTC-CGGGEEEEEECSBCTTTTSCBCC
T ss_pred CCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhcc-CCCceEEEEEecccCCCCcccCC
Confidence 7777777776643 77788763 34689999999997521 1113446666543334897777
Q ss_pred ---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 703 ---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 703 ---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+++|+++|++||+||++|.+|++.....+.+.....++ ..|.+ +++|+++..+.+|++
T Consensus 219 ~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~di~--s~sK~~~~GlriG~~ 279 (426)
T 1sff_A 219 PAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGV-APDLT--TFAKSIAGGFPLAGV 279 (426)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTS-CCSEE--EECGGGGTSSCCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCC-CCCEE--EEcccccCCCceEEE
Confidence 99999999999999999999996321111111112232 35755 557998853335665
No 207
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.05 E-value=1e-09 Score=122.45 Aligned_cols=217 Identities=13% Similarity=0.057 Sum_probs=138.5
Q ss_pred ccccCCcceeeeeHH----HHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCch
Q psy13453 11 AYPSETLSLLIYESF----KATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLN 86 (764)
Q Consensus 11 ~~~~~~~~~~~YSv~----KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~ 86 (764)
.+.++. .|.|.. +.|+.+|+.. +.||+ +++++|+++ |++ ++-+++.+.+ +++|.++|++
T Consensus 153 Viv~~~---~h~s~~~~~~~~a~~~G~~v---~~v~~-~~~~~d~~~----i~~-----~t~~v~i~~p-n~tG~~~~l~ 215 (438)
T 1wyu_A 153 VLVSQG---VHPEYRAVLRAYLEAVGAKL---LTLPL-EGGRTPLPE----VGE-----EVGAVVVQNP-NFLGALEDLG 215 (438)
T ss_dssp EEEETT---SCHHHHHHHHHHHHHTTCEE---EEECC-BTTBCCCCC----CCT-----TEEEEEEESS-CTTSBCCCHH
T ss_pred EEEcCc---cCHhHHHHHHHHHHHCCCEE---EEEcC-cCCccCHHH----hCC-----CeEEEEEECC-CCCeEEecHH
Confidence 344454 576666 4456689866 88998 568999877 432 2223356777 9999999999
Q ss_pred hhhc-----CCCceecc--c-cc-----------------ccc----------ceeeeecCCCcccccccc-----cccc
Q psy13453 87 APVS-----NGPLKVGG--V-LR-----------------RVY----------SSCLVPRGQKSLRTTVLF-----HFLF 126 (764)
Q Consensus 87 ~ia~-----~~wlHVDa--~-l~-----------------~~y----------~s~ll~rd~~~l~~~~s~-----~~d~ 126 (764)
++++ ++|+|||+ . +. ++| +++++.++. .... +.. ..+.
T Consensus 216 ~i~~la~~~g~~vivd~d~~a~g~~~~~~~~g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~~-~~~~-l~~~~~g~~~~~ 293 (438)
T 1wyu_A 216 PFAEAAHGAGALFVAVADPLSLGVLKPPGAYGADIAVGDGQSLGLPMGFGGPHFGFLATKKA-FVRQ-LPGRLVSETVDV 293 (438)
T ss_dssp HHHHHHHHTTCEEEEECCTTGGGTBCCHHHHTCSEEEEECTTTTCCCGGGCSCCEEEEECGG-GGGG-CCSCCEEEEEBT
T ss_pred HHHHHHHHcCCEEEEEechhhccCcCCCccCCCCEEEECCcccCCCccCCCCCeeEEEEcHH-HHHh-CCCceecccccc
Confidence 9886 89999543 2 10 111 134444322 1111 000 0000
Q ss_pred ---CCccc------------CCCCcc---cH-HHH--HHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC-C
Q psy13453 127 ---QHWQI------------PLGRRF---RA-LKL--WMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCP-P 184 (764)
Q Consensus 127 ---~d~tl------------e~SRr~---~A-Lkl--WatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~-P 184 (764)
..|.+ .++... .+ ..+ |+.+..+|.+|+.++.++..++++++.+.|++.++++++.+ +
T Consensus 294 ~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 373 (438)
T 1wyu_A 294 EGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKP 373 (438)
T ss_dssp TSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSS
T ss_pred CCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCCC
Confidence 00111 011111 22 234 44488999999999999999999999999999999999876 5
Q ss_pred CceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEE-EEeceeCCeeEEEEeccCCCCCHHHHHHHHHHH
Q psy13453 185 SMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIY-IVKGSFQDRLFMRFAICSSQTEESDVQLGWNEI 263 (764)
Q Consensus 185 ~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~-vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l 263 (764)
.+.+++|+.. .+ ..++.++|.++|+.. +......+..++|+++. +.+++++++.+++.|
T Consensus 374 ~~~~~~~~~~-----------------~~--~~~~~~~L~~~gi~v~~~~~~~~~~~~lRis~~-~~~t~edi~~~~~~l 433 (438)
T 1wyu_A 374 FFNEFALALP-----------------KD--PEAVRRALAERGFHGATPVPREYGENLALFAAT-ELHEEEDLLALREAL 433 (438)
T ss_dssp BCSEEEEECS-----------------SC--HHHHHHHHHHTTCCCCEECCTTSCSSEEEEECC-TTCCHHHHHHHHHHH
T ss_pred eEEEEEEeCC-----------------CC--HHHHHHHHHHCCceeccccccccCCCeEEEEec-ccCCHHHHHHHHHHH
Confidence 5666777531 01 246888888889854 12222223568999877 678899999999999
Q ss_pred HHH
Q psy13453 264 RTA 266 (764)
Q Consensus 264 ~~~ 266 (764)
+++
T Consensus 434 ~~~ 436 (438)
T 1wyu_A 434 KEV 436 (438)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 208
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.05 E-value=3.3e-09 Score=117.89 Aligned_cols=175 Identities=11% Similarity=-0.068 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 560 CTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 560 ~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
......++.++++++++.... ...+||+|||+||..++.++|... + ++-+|+....
T Consensus 84 ~~~~~~~l~~~la~~~~~~~~--------~~v~~~~ggsea~~~al~~~~~~~-~---------------~~~vi~~~~~ 139 (439)
T 3dxv_A 84 SNAPAVTLAERLLASFPGEGT--------HKIWFGHSGSDANEAAYRAIVKAT-G---------------RSGVIAFAGA 139 (439)
T ss_dssp EEHHHHHHHHHHHHTTTCTTT--------EEEEEESSHHHHHHHHHHHHHHHH-S---------------CCEEEEETTC
T ss_pred CCHHHHHHHHHHHHhCCCCCC--------CEEEEeCCHHHHHHHHHHHHHHHh-C---------------CCEEEEECCC
Confidence 345667788899998854320 257999999999999999887532 1 1235667777
Q ss_pred cchhHHHHHHhCCCc--------------eEEEecCCCCcc-----cHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc
Q psy13453 640 SNSSVEKSAIIGDVP--------------VRQLRSDDNGVL-----RGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF 700 (764)
Q Consensus 640 aH~Sv~kAa~~lGl~--------------v~~Vp~d~~g~m-----d~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai 700 (764)
.|.+...++...|.. +..+|.+..+.- |+++|+++|++. ....+.+|+.....+.+|.+
T Consensus 140 yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G~~ 217 (439)
T 3dxv_A 140 YHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAV--PAGSIGAAFIEPIQSDGGLI 217 (439)
T ss_dssp CCCSSHHHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTS--CTTCEEEEEECSSBSTTTSB
T ss_pred CCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhc--CCCCEEEEEEccccCCCCCc
Confidence 787776665554432 234454433333 799999999521 12245577777777778998
Q ss_pred cc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 701 DN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 701 Dp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
-+ +++|+++|++||++|++|.+|++.......+.....++ ..|.+++ .|.++.-+..|++
T Consensus 218 ~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~-~~di~s~--sK~~~~G~riG~~ 281 (439)
T 3dxv_A 218 VPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGF-VPDILVL--GKGLGGGLPLSAV 281 (439)
T ss_dssp CCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTC-CCSEEEE--CGGGGTTSCCEEE
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCC-CCCEEEE--cchhcCCcceEEE
Confidence 88 99999999999999999999986321111111112233 3576654 5988754445654
No 209
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.04 E-value=2.2e-09 Score=117.37 Aligned_cols=167 Identities=16% Similarity=0.105 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
.....++.+++++++|. + ..+||+|||+||..|+.+++...... +. .++-+|+.+..-
T Consensus 77 ~~~~~~l~~~la~~~~~-~----------~v~~~~gg~ea~~~al~~~~~~~~~~-g~----------~~~~vi~~~~~y 134 (395)
T 3nx3_A 77 NENIAAAAKNLAKASAL-E----------RVFFTNSGTESIEGAMKTARKYAFNK-GV----------KGGQFIAFKHSF 134 (395)
T ss_dssp CHHHHHHHHHHHHHHTC-S----------EEEEESSHHHHHHHHHHHHHHHHHHT-TC----------TTCEEEEETTCC
T ss_pred CHHHHHHHHHHHHhcCC-C----------eEEEeCCHHHHHHHHHHHHHHHhhcc-CC----------CCCEEEEEcCCc
Confidence 34556677788888873 2 47999999999999999887654321 10 113356666666
Q ss_pred chhHHHHHHhCC------------CceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc----HH
Q psy13453 641 NSSVEKSAIIGD------------VPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN----LE 704 (764)
Q Consensus 641 H~Sv~kAa~~lG------------l~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp----l~ 704 (764)
|.+...+....+ .++..+|.+ |+++|+++|++. +.+|++....+.+|.+-+ ++
T Consensus 135 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~------~~~v~~~~~~~~~G~~~~~~~~l~ 203 (395)
T 3nx3_A 135 HGRTLGALSLTANEKYQKPFKPLISGVKFAKYN-----DISSVEKLVNEK------TCAIILESVQGEGGINPANKDFYK 203 (395)
T ss_dssp CCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTT-----CHHHHHTTCCTT------EEEEEEESEECTTSCEECCHHHHH
T ss_pred CCCCHHHHhhcCCcccccccCCCCCCcEEeCCC-----CHHHHHHhccCC------eEEEEEeCccCCCCcccCCHHHHH
Confidence 655544443332 345556543 699999888532 446666666777888877 99
Q ss_pred HHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 705 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 705 eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+|+++|++||++||+|.+|.+.......+.....++ ..|.++++ |.++..+.+|++
T Consensus 204 ~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~~~~G~~~G~~ 259 (395)
T 3nx3_A 204 ALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQI-LPDIMTSA--KALGCGLSVGAF 259 (395)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGTTTSCCEEE
T ss_pred HHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCC-CCCEEEec--ccccCCCceEEE
Confidence 999999999999999999986422211111122233 35777765 887766667765
No 210
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.03 E-value=3e-09 Score=113.24 Aligned_cols=223 Identities=11% Similarity=0.001 Sum_probs=144.7
Q ss_pred eeee--HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CC
Q psy13453 20 LIYE--SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NG 92 (764)
Q Consensus 20 ~~YS--v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~ 92 (764)
.||| +.++++..|+.. +.||+++++.+|+++|+++|++. ++-+++.+.+++++|.+.|++++.+ ++
T Consensus 83 ~~~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~l~~~----~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~ 155 (353)
T 2yrr_A 83 GAFSQRVAEMAALHGLDP---EVLDFPPGEPVDPEAVARALKRR----RYRMVALVHGETSTGVLNPAEAIGALAKEAGA 155 (353)
T ss_dssp SHHHHHHHHHHHHTTCCE---EEEECCTTSCCCHHHHHHHHHHS----CCSEEEEESEETTTTEECCHHHHHHHHHHHTC
T ss_pred CCchHHHHHHHHHcCCce---EEEeCCCCCCCCHHHHHHHHHhC----CCCEEEEEccCCCcceecCHHHHHHHHHHcCC
Confidence 3566 467888899876 99999999999999999999862 1224567889999999999999876 89
Q ss_pred Cceeccccccc--------cc-eeeeecCCCccccc----cc-cc---cc-cC-----------------CcccCCCCcc
Q psy13453 93 PLKVGGVLRRV--------YS-SCLVPRGQKSLRTT----VL-FH---FL-FQ-----------------HWQIPLGRRF 137 (764)
Q Consensus 93 wlHVDa~l~~~--------y~-s~ll~rd~~~l~~~----~s-~~---~d-~~-----------------d~tle~SRr~ 137 (764)
|+++|++.... +. .++...-.+.+..- +- .. .+ +. .....++...
T Consensus 156 ~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (353)
T 2yrr_A 156 LFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCLSAPPGLAPIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPV 235 (353)
T ss_dssp EEEEECTTTTTTSCCCHHHHTCSEEECCTTSTTCCCSSCEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCH
T ss_pred eEEEEcCcccccccccccccCceEEEecCcccccCCCceEEEEECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCH
Confidence 99999964210 00 11111111111100 00 00 00 00 0111222222
Q ss_pred -cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC--CceeEEEEeeccccccccccccCccCCccH
Q psy13453 138 -RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP--SMGLVCFRLKVRFWDKLDNLFGTISFGDND 214 (764)
Q Consensus 138 -~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P--~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~ 214 (764)
....+++++..+..+|+.++.++..++++++.+.|++. +++++.++ ...+++|++. . +.+
T Consensus 236 ~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-~--------------~~~- 298 (353)
T 2yrr_A 236 LLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRPYPKASPLPTVLVVRPP-E--------------GVD- 298 (353)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSSBCTTEEEEECC-T--------------TCC-
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccccCccCCCeEEEEECC-C--------------CCC-
Confidence 22355778888888889999999999999999999997 89987754 3456678752 1 111
Q ss_pred HHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHH-HHHHHHHHHHH
Q psy13453 215 LNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQ-LGWNEIRTATE 268 (764)
Q Consensus 215 ~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~-~~l~~l~~~~~ 268 (764)
..++.++|.++|..+..........++|+++....+ +++++ .+++.|+++.+
T Consensus 299 -~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~~~~-~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 299 -ADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMGEGA-RREAYQAFLKALDRALA 351 (353)
T ss_dssp -HHHHHHHHHHTTEECEECCGGGTTTCEEEECSGGGS-CHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHCCEEEeCCccccCCCeEEEecCccCC-HHHHHHHHHHHHHHHHh
Confidence 246888888888755443322334679998655554 55666 99999887653
No 211
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.00 E-value=4.3e-09 Score=116.73 Aligned_cols=183 Identities=13% Similarity=0.018 Sum_probs=122.5
Q ss_pred chHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEec
Q psy13453 558 PACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTS 637 (764)
Q Consensus 558 p~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S 637 (764)
.....+-+.+.+|+.+..|.+..-.....+....++|+|+++++..++.+..+ ++..|++.
T Consensus 78 ~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~-------------------~gd~Vlv~ 138 (425)
T 2r2n_A 78 AGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIIN-------------------PGDNVLLD 138 (425)
T ss_dssp TCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCC-------------------TTCEEEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCC-------------------CCCEEEEe
Confidence 33456777888899888887541000000013678999999998877765421 11257778
Q ss_pred CCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhh------hcCCCceEEEE-eeccCCccccccHH---HHH
Q psy13453 638 DQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDL------AKGLIPCCLIA-TLGTTGTCAFDNLE---ELG 707 (764)
Q Consensus 638 ~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~------~~G~~p~~Vva-taGTT~~GaiDpl~---eIa 707 (764)
+-+|.....+++..|.+++.||.+++| +|+++|++++++.. ..+..+-+|++ ...++.+|.+-+.+ +|+
T Consensus 139 ~p~y~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~ 217 (425)
T 2r2n_A 139 EPAYSGTLQSLHPLGCNIINVASDESG-IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIY 217 (425)
T ss_dssp SSCCHHHHHHHGGGTCEEEEECEETTE-ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHH
T ss_pred CCCcHHHHHHHHHcCCEEEEeCcCCCC-CCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHH
Confidence 889999999999999999999998765 99999999986321 01123445544 56788899987655 999
Q ss_pred HHHHhcCCEEEEeccccccccccc---hhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 708 PICQEYNIWLHVDAAYAGSALLLP---EYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 708 ~i~~~~glwLHVDaA~Gg~~l~~~---~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
++|++||+|+++|.+|+....-.. .... +. -..-+-+..+++|+++ | +-+|.+
T Consensus 218 ~~a~~~~~~li~De~~~~~~~~g~~~~~~~~-~~-~~~~~i~~~s~SK~~~-~GlRiG~~ 274 (425)
T 2r2n_A 218 ELARKYDFLIIEDDPYYFLQFNKFRVPTFLS-MD-VDGRVIRADSFSKIIS-SGLRIGFL 274 (425)
T ss_dssp HHHHHTTCEEEEECTTGGGBSSSSCCCCTGG-GC-TTSCEEEEEESTTTTC-STTCCEEE
T ss_pred HHHHHcCCEEEEECCcccccCCCCCCCCccc-cC-CCCCEEEEccchhhcc-CccceEEE
Confidence 999999999999999986432111 1111 11 1112466779999997 4 235654
No 212
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.00 E-value=2.5e-09 Score=118.52 Aligned_cols=175 Identities=14% Similarity=-0.016 Sum_probs=115.5
Q ss_pred HHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHH--HHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 567 VMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATL--VSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 567 v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl--~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
+.+.++++++.+++ ..++|+|+++++. .++.+..+. .+... . .+. ..++..|++.+-+|.+.
T Consensus 83 lr~~ia~~~~~~~~---------~i~~t~G~~~al~~~~~~~~l~~~-~~g~~-~--~~~---~~~gd~V~v~~p~y~~~ 146 (427)
T 3ppl_A 83 IRQIWADLLGVPVE---------QVLAGDASSLNIMFDVISWSYIFG-NNDSV-Q--PWS---KEETVKWICPVPGYDRH 146 (427)
T ss_dssp HHHHHHHHHTSCGG---------GEEECSSCHHHHHHHHHHHHHHHC-CTTCS-S--CGG---GSSCCEEEEEESCCHHH
T ss_pred HHHHHHHHhCCCcc---------eEEEeCCcHHHHHHHHHHHHHhcc-CCccc-c--ccc---CCCCCEEEEcCCCcHHH
Confidence 33445555577653 6899999999984 444433220 01000 0 000 00123577888999999
Q ss_pred HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEe-eccCCccccccHH---HHHHHH-HhcCCEEEE
Q psy13453 645 EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIAT-LGTTGTCAFDNLE---ELGPIC-QEYNIWLHV 719 (764)
Q Consensus 645 ~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~Vvat-aGTT~~GaiDpl~---eIa~i~-~~~glwLHV 719 (764)
..+++..|.+++.||++++| +|+++|+++++.. .+-+|+++ ..++.+|.+-+.+ +|+++| ++||+|+|+
T Consensus 147 ~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~-----~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~ 220 (427)
T 3ppl_A 147 FSITERFGFEMISVPMNEDG-PDMDAVEELVKNP-----QVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVW 220 (427)
T ss_dssp HHHHHHTTCEEEEEEEETTE-ECHHHHHHHTTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEE
T ss_pred HHHHHHcCCEEEEeCCCCCC-CCHHHHHHHHhcC-----CCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEE
Confidence 99999999999999999877 9999999998421 23355555 6789999997666 888899 999999999
Q ss_pred eccccccccccc-----hhhhhh--cCCCcccEEEEcCCccCCCCcCceee
Q psy13453 720 DAAYAGSALLLP-----EYAHLK--RGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 720 DaA~Gg~~l~~~-----~~r~~l--~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
|.+|+...+-.. ...... .+....+-+..+++|+++....+|.+
T Consensus 221 De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~ 271 (427)
T 3ppl_A 221 DNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFF 271 (427)
T ss_dssp ECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEE
T ss_pred ECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEE
Confidence 999987432211 111110 11223367788999997666677764
No 213
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=98.99 E-value=2.2e-09 Score=116.18 Aligned_cols=223 Identities=10% Similarity=0.043 Sum_probs=146.7
Q ss_pred HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceecc
Q psy13453 24 SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGG 98 (764)
Q Consensus 24 v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa 98 (764)
+.+++...|... +.+|++.++.+|+++|+++|++. ++-+++.+.+++++|.+.|++++.+ ++|+++|+
T Consensus 113 ~~~~~~~~g~~~---~~~~~~~~~~~d~~~l~~~i~~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De 185 (393)
T 3kgw_A 113 AAEIADRIGARV---HQMIKKPGEHYTLQEVEEGLAQH----KPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDS 185 (393)
T ss_dssp HHHHHHHTTCEE---EEEECCTTCCCCHHHHHHHHHHH----CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHcCCce---EEEeCCCCCCCCHHHHHHHHhhC----CCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEEC
Confidence 378888999876 99999999999999999999873 1235567778999999999999886 89999999
Q ss_pred cccc---c-----cc-eeeeecCCCccccc----cc-cccc---------------cCCc-------c------c-CCCC
Q psy13453 99 VLRR---V-----YS-SCLVPRGQKSLRTT----VL-FHFL---------------FQHW-------Q------I-PLGR 135 (764)
Q Consensus 99 ~l~~---~-----y~-s~ll~rd~~~l~~~----~s-~~~d---------------~~d~-------t------l-e~SR 135 (764)
+... . +. .++...-.+.+..- +- ...+ +.+. . . .++-
T Consensus 186 ~~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (393)
T 3kgw_A 186 VASLGGVPIYMDQQGIDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTT 265 (393)
T ss_dssp TTTTTTSCCCTTTTTCCEEEEESSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCC
T ss_pred CccccCcccchhhcCCCEEEecCcccccCCCceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCC
Confidence 6320 0 00 11111111111100 00 0000 0000 0 0 0111
Q ss_pred -cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC----ceeEEEEeeccccccccccccCccC
Q psy13453 136 -RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS----MGLVCFRLKVRFWDKLDNLFGTISF 210 (764)
Q Consensus 136 -r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~----l~iV~Fry~P~~~~~~~~~~~~~~~ 210 (764)
......+++++..+..+++.++.++..++++++.+.|++. +++++.++. ..+++|++. .+
T Consensus 266 ~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-~~------------- 330 (393)
T 3kgw_A 266 PVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM-GLKFFVKDPEIRLPTITTVTVP-AG------------- 330 (393)
T ss_dssp CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSGGGBCSSEEEEECC-TT-------------
T ss_pred CHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcCCeEEEEeCC-CC-------------
Confidence 2223355777888888899999999999999999999998 888764322 245556542 11
Q ss_pred CccHHHHHHHHHHHhc-CcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 211 GDNDLNKAVYDRIIAR-KVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 211 ~~d~~n~~L~~~L~~~-G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
.+ ..++.++|.++ |..+.......+..++|++++...+++++++.+++.|+++.+++.
T Consensus 331 -~~--~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 389 (393)
T 3kgw_A 331 -YN--WRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCP 389 (393)
T ss_dssp -BC--HHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSC
T ss_pred -CC--HHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhh
Confidence 11 24678888877 865443332234568999876777799999999999999887653
No 214
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=98.98 E-value=2e-09 Score=118.82 Aligned_cols=175 Identities=11% Similarity=-0.009 Sum_probs=115.5
Q ss_pred HHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHH--HHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhH
Q psy13453 567 VMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATL--VSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 567 v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl--~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
+.+.++++++.+++ ..++|+|+|+++. .++.+.... .+. .. ..+. .++..|++..-+|...
T Consensus 75 lr~~ia~~~~~~~~---------~i~~t~G~~~al~~~~~~~~l~~~-~~g--~~-~~~~----~~gd~Vlv~~p~y~~~ 137 (423)
T 3ez1_A 75 ARALFAGYLDVKAE---------NVLVWNNSSLELQGLVLTFALLHG-VRG--ST-GPWL----SQTPKMIVTVPGYDRH 137 (423)
T ss_dssp HHHHHHHHTTSCGG---------GEEECSSCHHHHHHHHHHHHHHTC-CTT--CS-SCGG----GGCCEEEEEESCCHHH
T ss_pred HHHHHHHHhCCChh---------hEEEeCCcHHHHHHHHHHHHHhcc-CCC--cc-cccc----CCCCEEEEcCCCcHHH
Confidence 44455666677653 6899999999986 555443210 010 00 0000 0023577888999999
Q ss_pred HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEe-eccCCccccccHH---HHHHHH-HhcCCEEEE
Q psy13453 645 EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIAT-LGTTGTCAFDNLE---ELGPIC-QEYNIWLHV 719 (764)
Q Consensus 645 ~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~Vvat-aGTT~~GaiDpl~---eIa~i~-~~~glwLHV 719 (764)
..++...|.+++.||.+++| +|+++|+++|++. ..+-+|+++ ..++.+|.+-+.+ +|+++| ++||+|+++
T Consensus 138 ~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~----~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~ 212 (423)
T 3ez1_A 138 FLLLQTLGFELLTVDMQSDG-PDVDAVERLAGTD----PSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFA 212 (423)
T ss_dssp HHHHHHHTCEEEEEEEETTE-ECHHHHHHHHHSC----TTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEE
T ss_pred HHHHHHcCCEEEeccCCCCC-CCHHHHHHHHhhC----CCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEE
Confidence 99999999999999998776 9999999999621 124455544 6788999997666 888888 999999999
Q ss_pred ecccccccccc-c-----hhhhhh--cCCCcccEEEEcCCccCCCCcCceee
Q psy13453 720 DAAYAGSALLL-P-----EYAHLK--RGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 720 DaA~Gg~~l~~-~-----~~r~~l--~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
|.+|+...+.. . ...... .+....+-+..+++|+++....+|++
T Consensus 213 De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~ 264 (423)
T 3ez1_A 213 DDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFV 264 (423)
T ss_dssp ECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEE
T ss_pred ECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEE
Confidence 99998532221 0 111110 01223367788999987666777765
No 215
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=98.98 E-value=4.2e-09 Score=113.63 Aligned_cols=222 Identities=11% Similarity=0.032 Sum_probs=149.0
Q ss_pred eeee--HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CC
Q psy13453 20 LIYE--SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NG 92 (764)
Q Consensus 20 ~~YS--v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~ 92 (764)
.||| +.+.+...|... +.||++.++.+|+++|+++|++. ++-+++.+.+++++|.+.|++++.+ ++
T Consensus 86 ~~~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~i~~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~ 158 (384)
T 3zrp_A 86 GVFGDRWEQIFKRYPVNV---KVLRPSPGDYVKPGEVEEEVRKS----EYKLVALTHVETSTGVREPVKDVINKIRKYVE 158 (384)
T ss_dssp SHHHHHHHHHHTTSSCEE---EEECCSTTCCCCHHHHHHHHHHS----CEEEEEEESEETTTTEECCHHHHHHHHGGGEE
T ss_pred CcchHHHHHHHHHcCCcE---EEecCCCCCCCCHHHHHHHHHhC----CCcEEEEeCCCCCCceECcHHHHHHHHHhcCC
Confidence 4555 667778888876 99999999999999999999873 1224457788999999999999876 88
Q ss_pred Cceecccccc--------------------c-c-----ceeeeecCCCcccccc----ccc---cc---cC---------
Q psy13453 93 PLKVGGVLRR--------------------V-Y-----SSCLVPRGQKSLRTTV----LFH---FL---FQ--------- 127 (764)
Q Consensus 93 wlHVDa~l~~--------------------~-y-----~s~ll~rd~~~l~~~~----s~~---~d---~~--------- 127 (764)
|+++|++... + + .++++.++.. +. .+ ... .+ +.
T Consensus 159 ~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (384)
T 3zrp_A 159 LIVVDGVSSVGAEEVKAEEWNVDVYLTASQKALGSAAGLGLLLLSPKA-LS-ILDSQNSIAGYYLDLRNWLPVMRGAEEG 236 (384)
T ss_dssp EEEEECTTTTTTSCCCTTTTTCSEEEEETTSTTCCCSSEEEEEECHHH-HH-HHHHCCCSCCSTTCHHHHHHHHHHHHTT
T ss_pred EEEEECcccccCccccccccCCCEEEecCcccccCCCceEEEEECHHH-HH-HhcCCCCCCcccccHHHHHHHHHhhccc
Confidence 9999985310 1 0 0222222110 00 00 000 00 00
Q ss_pred CcccCCCC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC----CceeEEEEeecccccccc
Q psy13453 128 HWQIPLGR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP----SMGLVCFRLKVRFWDKLD 202 (764)
Q Consensus 128 d~tle~SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P----~l~iV~Fry~P~~~~~~~ 202 (764)
..+.-++. ......+++++..+..+|+.++.++..++++++.+.|+++ +++++.++ ...+++|++..
T Consensus 237 ~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~------- 308 (384)
T 3zrp_A 237 KAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEIVARRPESYSNTVTGVILKV------- 308 (384)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSGGGBCSSEEEEECSS-------
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcccccCccEEEEECCC-------
Confidence 00000122 2234466788888888889999999999999999999998 88877655 35677786531
Q ss_pred ccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 203 NLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 203 ~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
.+ ..++.++|.++|.......... ..++|+++... +++++++.+++.|+++.+++.
T Consensus 309 ---------~~--~~~~~~~l~~~gi~v~~g~~~~-~~~iRi~~~~~-~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 309 ---------AD--PQKVLAGTVNEGVEFAPGVHPA-FKYFRIGHMGW-VTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp ---------SC--HHHHHHHHHTTTCCCEECCCTT-CCEEEEECCSS-CCHHHHHHHHHHHHHHHHHHT
T ss_pred ---------CC--HHHHHHHHHHCCEEEecCCCCC-cCEEEEecccc-CCHHHHHHHHHHHHHHHHHcC
Confidence 11 2468888888887544222111 16899976655 789999999999999987764
No 216
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=98.97 E-value=7.1e-09 Score=114.88 Aligned_cols=170 Identities=13% Similarity=-0.063 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHcCCC-ccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 564 EVLVMNWLGKALGLP-EEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 564 E~~v~~~la~llG~p-~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
..++.+.+++++|.+ + ...+||+|||++|..++.+++... ++-+|+....-|.
T Consensus 88 ~~~l~~~la~~~~~~~~---------~~v~~~~gg~ea~~~ai~~~~~~~-----------------~~~vi~~~p~yh~ 141 (419)
T 2eo5_A 88 QLELAKKLVTYSPGNFQ---------KKVFFSNSGTEAIEASIKVVKNTG-----------------RKYIIAFLGGFHG 141 (419)
T ss_dssp HHHHHHHHHHHSSCSSC---------EEEEEESSHHHHHHHHHHHHHTTS-----------------CCEEEEETTCCCC
T ss_pred HHHHHHHHHHhCCCCcC---------CEEEEeCchHHHHHHHHHHHHHhh-----------------CCcEEEECCCcCC
Confidence 345667888888875 3 257999999999999998875321 1235666667786
Q ss_pred hHHHHHHhCC-------------CceEEEecCCCCc----------------ccHHHHH-HHHHHhhhcCCCceEEEEee
Q psy13453 643 SVEKSAIIGD-------------VPVRQLRSDDNGV----------------LRGDALL-TAVKEDLAKGLIPCCLIATL 692 (764)
Q Consensus 643 Sv~kAa~~lG-------------l~v~~Vp~d~~g~----------------md~~~Le-~~I~~~~~~G~~p~~Vvata 692 (764)
+...++...| .+++.+|.+++++ +|+++|+ ++|++.. ....+.+|+++-
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~-~~~~~~~vi~~p 220 (419)
T 2eo5_A 142 RTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLV-PPEEVAGIFFEP 220 (419)
T ss_dssp SSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTC-CGGGEEEEEECS
T ss_pred CCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhcc-CCCCEEEEEEeC
Confidence 6665554432 2678888865543 5789999 9887421 001244555554
Q ss_pred ccCCcccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 693 GTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 693 GTT~~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
-++.+|.+-+ +++|+++|++||++||+|.+|.+....-..+.....++ ..|.+|+ -|.++.+ +.+|.+
T Consensus 221 ~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~-~~d~~t~--sK~~~~G~~riG~~ 293 (419)
T 2eo5_A 221 IQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNT-VPDVITL--AKALGGGIMPIGAT 293 (419)
T ss_dssp SBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEE--CGGGGTTTSCCEEE
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCC-CCCEEEe--cccccCCccceEEE
Confidence 4455797655 99999999999999999999986432111111111233 3577765 4888765 667765
No 217
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=98.97 E-value=5.5e-09 Score=114.31 Aligned_cols=218 Identities=9% Similarity=0.015 Sum_probs=145.8
Q ss_pred HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceecc
Q psy13453 24 SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGG 98 (764)
Q Consensus 24 v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa 98 (764)
+.++++..|... +.||+++++.+|+++|+++|+++ +-+++.+.+++++|.+.|++++++ ++|+++|+
T Consensus 135 ~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~l~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~ 206 (420)
T 1t3i_A 135 WQMVAAKTGAVL---KFVQLDEQESFDLEHFKTLLSEK-----TKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDA 206 (420)
T ss_dssp HHHHHHHHCCEE---EEECBCTTSSBCHHHHHHHCCTT-----EEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHhcCcEE---EEeccCCCCCcCHHHHHHhhCCC-----ceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEh
Confidence 677888899876 99999999999999999999642 224467889999999999999876 89999999
Q ss_pred cccc--------------------c-c----ceeeeecCCCccccccccccccC----------------CcccC-CCCc
Q psy13453 99 VLRR--------------------V-Y----SSCLVPRGQKSLRTTVLFHFLFQ----------------HWQIP-LGRR 136 (764)
Q Consensus 99 ~l~~--------------------~-y----~s~ll~rd~~~l~~~~s~~~d~~----------------d~tle-~SRr 136 (764)
+... + + +++++.++ +.... +......+ .+.++ ++..
T Consensus 207 a~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~G~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (420)
T 1t3i_A 207 CQSAPHYPLDVQLIDCDWLVASGHKMCAPTGIGFLYGKE-EILEA-MPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPA 284 (420)
T ss_dssp TTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECH-HHHHH-SCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCC
T ss_pred hhccCCccCchhhcCCCEEEEehhhhcCCCceEEEEEch-HHHhh-cCceecCCCccccccccccCCCCchhhccCCCcc
Confidence 5311 0 0 02222221 10000 00000000 00111 1222
Q ss_pred c-cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC-----CceeEEEEeeccccccccccccCccC
Q psy13453 137 F-RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP-----SMGLVCFRLKVRFWDKLDNLFGTISF 210 (764)
Q Consensus 137 ~-~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P-----~l~iV~Fry~P~~~~~~~~~~~~~~~ 210 (764)
. .++.++++++.+...|+.++.++..++++++.+.|++.++++++.++ ..++++|++. .
T Consensus 285 ~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-~-------------- 349 (420)
T 1t3i_A 285 IAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVA-G-------------- 349 (420)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEET-T--------------
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEEC-C--------------
Confidence 2 22345557888877789999999999999999999999999988765 3678888742 1
Q ss_pred CccHHHHHHHHHHHhcCcEEEEec--------eeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 211 GDNDLNKAVYDRIIARKVIYIVKG--------SFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 211 ~~d~~n~~L~~~L~~~G~~~vs~t--------~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
.+ ..++.+.|.+.|..+.... .+....++|+++. ..+++++++.+++.|+++.+++
T Consensus 350 -~~--~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~-~~~~~~~i~~~~~~l~~~~~~~ 413 (420)
T 1t3i_A 350 -LH--ASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLY-FYNTKEEIDLFLQSLQATIRFF 413 (420)
T ss_dssp -BC--HHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECC-TTCCHHHHHHHHHHHHHHHHHT
T ss_pred -CC--HHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 11 1357788888887543221 1111568999765 5568999999999999988765
No 218
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=98.97 E-value=7.3e-09 Score=111.98 Aligned_cols=225 Identities=12% Similarity=0.020 Sum_probs=149.8
Q ss_pred eeee--HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CC
Q psy13453 20 LIYE--SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NG 92 (764)
Q Consensus 20 ~~YS--v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~ 92 (764)
.|+| +.+++...|... +.||++.++.+|+++|+++|++.. ++-+++.+.+++++|.+.|++++++ ++
T Consensus 104 ~~~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~l~~~~---~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~ 177 (386)
T 2dr1_A 104 GAFGKRYKEVVESNGRKA---VVLEYEPGKAVKPEDLDDALRKNP---DVEAVTITYNETSTGVLNPLPELAKVAKEHDK 177 (386)
T ss_dssp SHHHHHHHHHHHHTTCEE---EEEECCTTCCCCHHHHHHHHHHCT---TCCEEEEESEETTTTEECCHHHHHHHHHHTTC
T ss_pred CchhHHHHHHHHHhCCce---EEEecCCCCCCCHHHHHHHHhcCC---CCcEEEEEeecCCcchhCCHHHHHHHHHHcCC
Confidence 4566 889999999876 999999989999999999997521 2234567788999999999999886 89
Q ss_pred Cceeccccccc--------cc------------------eeeeecCCCcccccccc----c--cc-------cC-CcccC
Q psy13453 93 PLKVGGVLRRV--------YS------------------SCLVPRGQKSLRTTVLF----H--FL-------FQ-HWQIP 132 (764)
Q Consensus 93 wlHVDa~l~~~--------y~------------------s~ll~rd~~~l~~~~s~----~--~d-------~~-d~tle 132 (764)
++++|++.... +. ++++.++. ... .+.. . .+ +. .....
T Consensus 178 ~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (386)
T 2dr1_A 178 LVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSER-FLE-IAEKMPERGWYFDIPLYVKYLKEKESTP 255 (386)
T ss_dssp EEEEECTTTBTTBCCCTTTTTCSEEEEETTSTTCCCSSCEEEEECHH-HHH-HHTTCTTCCSTTCHHHHHHHHHHHSSCS
T ss_pred eEEEEccccccCccccccccCCcEEEEeccccccCCCceEEEEECHH-HHH-HHhcCCCCceEEeHHHHHHhhccCCCCC
Confidence 99999953100 00 12222211 000 0000 0 00 00 00111
Q ss_pred CCC-cccHHHHHHHHHHccHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC---CceeEEEEeeccccccccccccC
Q psy13453 133 LGR-RFRALKLWMTLRSYGLK-GLQAYLRKHISLAKKFADLVEQDDRFELVCPP---SMGLVCFRLKVRFWDKLDNLFGT 207 (764)
Q Consensus 133 ~SR-r~~ALklWatL~~lG~e-Gy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P---~l~iV~Fry~P~~~~~~~~~~~~ 207 (764)
++. ......++++|+.+... |+.++.++..++++++.+.|++. +++++.++ ..++++|++..
T Consensus 256 ~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~------------ 322 (386)
T 2dr1_A 256 STPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI-GLDILAEPGHESPTITAVLTPP------------ 322 (386)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCTTCBCSSEEEEECCT------------
T ss_pred CCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCeeCcCccccCCceEEEEcCC------------
Confidence 222 22234567778777666 78999999999999999999998 88876543 35677786531
Q ss_pred ccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 208 ISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 208 ~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
+.+ ..++.++|.++|..........+..++|+++.. .+++++++.+++.|+++.+++.
T Consensus 323 ---~~~--~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~-~~~~~~i~~~~~~l~~~~~~~~ 380 (386)
T 2dr1_A 323 ---GIK--GDEVYEAMRKRGFELAKGYGSVKEKTFRIGHMG-YMKFEDIQEMLDNLREVINELK 380 (386)
T ss_dssp ---TCC--HHHHHHHHHHTTEECEECCGGGTTTEEEEECCS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCC--HHHHHHHHHHCCeEEecCccccCCCEEEEECCC-CCCHHHHHHHHHHHHHHHHHcC
Confidence 111 256888888888754443322234689998765 6689999999999999887764
No 219
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=98.94 E-value=1.3e-08 Score=112.88 Aligned_cols=177 Identities=17% Similarity=0.113 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+|+++.++.+. ...+||+|||+||..|+.+++...... +.. .++.+|+....-|
T Consensus 72 ~~~~~l~~~la~~~~~~~---------~~v~~~~gg~ea~~~al~~~~~~~~~~-g~~---------~~~~vi~~~~~yh 132 (430)
T 3i4j_A 72 DVLEEYAGRLARFVGLPT---------FRFWAVSGGSEATESAVKLARQYHVER-GEP---------GRFKVITRVPSYH 132 (430)
T ss_dssp HHHHHHHHHHHHHTTCTT---------CEEEEESSHHHHHHHHHHHHHHHHHHT-TCT---------TCCEEEEETTC--
T ss_pred HHHHHHHHHHHHhCCCCC---------CEEEEeCcHHHHHHHHHHHHHHHHHhc-CCC---------CCcEEEEEeCCcC
Confidence 455667788999988654 268999999999999999988754332 110 1133455555555
Q ss_pred hhHHHHHHhCCC--------------ceEEEecCCC---CcccHHHHHHHHHHhhhcCCCceEEEEeeccC-Ccccccc-
Q psy13453 642 SSVEKSAIIGDV--------------PVRQLRSDDN---GVLRGDALLTAVKEDLAKGLIPCCLIATLGTT-GTCAFDN- 702 (764)
Q Consensus 642 ~Sv~kAa~~lGl--------------~v~~Vp~d~~---g~md~~~Le~~I~~~~~~G~~p~~VvataGTT-~~GaiDp- 702 (764)
....-+....+. .+..+|.++. +..|+++|+++|++... ..+.+|++.--+. .+|.+-+
T Consensus 133 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~--~~~~~vi~~p~~~~~~G~~~~~ 210 (430)
T 3i4j_A 133 GASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGP--ETVAAFMAEPVVGASDAALAPA 210 (430)
T ss_dssp -----------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCG--GGEEEEEECSSCCGGGTTCCCC
T ss_pred CCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCC--CCEEEEEEcCcccCcCCcccCC
Confidence 544333333221 4455665544 56788999999975310 2345666666565 7787766
Q ss_pred ---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhc-CCCcccEEEEcCCccCCCC-cCcee
Q psy13453 703 ---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKR-GLEYVDSFDFNTHKWLLVN-FDCSA 762 (764)
Q Consensus 703 ---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~-gie~aDSit~d~HK~l~~P-~~~g~ 762 (764)
+++|+++|++||++||+|-+|.+.......+..... ++ ..|.++++ |.++.- +..|.
T Consensus 211 ~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~-~~di~t~s--K~l~~G~~r~G~ 272 (430)
T 3i4j_A 211 PGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGV-TPDIAVLG--KGLAAGYAPLAG 272 (430)
T ss_dssp TTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTC-CCSEEEEC--GGGTTTSSCCEE
T ss_pred HHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCC-CCcEEEEc--ccccCCccccEE
Confidence 999999999999999999999875322111111111 33 35777765 987743 33444
No 220
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=98.93 E-value=1.8e-08 Score=108.80 Aligned_cols=222 Identities=9% Similarity=-0.061 Sum_probs=142.1
Q ss_pred eeeeHHHHHhh---cCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----C
Q psy13453 20 LIYESFKATHS---LSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----N 91 (764)
Q Consensus 20 ~~YSv~KAa~~---LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~ 91 (764)
.|.|+.+++.+ .|+.. +.||+++++++|+++|+++|+++ +-+++.+.+++++|.+.|++++++ +
T Consensus 97 ~~~~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~ 168 (382)
T 4eb5_A 97 EHMSVINPAKFLQKQGFEV---EYIPVGKYGEVDVSFIDQKLRDD-----TILVSVQHANNEIGTIQPVEEISEVLAGKA 168 (382)
T ss_dssp CCHHHHHHHHHHTTTTCEE---EEECBCTTSCBCHHHHHHHCCTT-----EEEEECCSBCTTTCBBCCHHHHHHHHTTSS
T ss_pred cchHHHHHHHHHHhCCcEE---EEeccCCCCccCHHHHHHHhcCC-----CeEEEEeccCCCccccCCHHHHHHHHHHCC
Confidence 46778777776 46544 99999999999999999998642 224467889999999999999876 8
Q ss_pred CCceeccccccc---------------------c----ceeeeecCCCccccccccccccCCcccC-CCCc-ccHHHHHH
Q psy13453 92 GPLKVGGVLRRV---------------------Y----SSCLVPRGQKSLRTTVLFHFLFQHWQIP-LGRR-FRALKLWM 144 (764)
Q Consensus 92 ~wlHVDa~l~~~---------------------y----~s~ll~rd~~~l~~~~s~~~d~~d~tle-~SRr-~~ALklWa 144 (764)
+| ++|++.... + .++++.++...+...+.. .. ...... ++-. .....+++
T Consensus 169 ~~-i~D~a~~~g~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~~~~l~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~ 245 (382)
T 4eb5_A 169 AL-HIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEAKLQPVILG-GG-QENGLRSGSENVPSIVGFGK 245 (382)
T ss_dssp EE-EEECTTTBTTBCCCHHHHTCSEEEEETGGGTCCSSCEEEEEETTCCCCCSSCS-SC-TGGGTSCSCCCHHHHHHHHH
T ss_pred CE-EEEcchhcCCcccCccccCCCEEEeehHHhcCCCceEEEEEccccccCceecC-CC-ccccccCCCccHHHHHHHHH
Confidence 89 999964210 0 012222221101000000 00 000011 1111 11234455
Q ss_pred HHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC---ceeEEEEeeccccccccccccCccCCccHHHHHHHH
Q psy13453 145 TLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS---MGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYD 221 (764)
Q Consensus 145 tL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~---l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~ 221 (764)
++..+ .+++.++.++..++++++.+.|++.|+++++.++. .++++|++.+ .+ ..++.+
T Consensus 246 al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~--~~~~~~ 306 (382)
T 4eb5_A 246 AAEIT-AMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSY----------------IE--GESIVL 306 (382)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETT----------------SC--HHHHHH
T ss_pred HHHHH-HHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCC----------------cC--HHHHHH
Confidence 55544 45899999999999999999999999999876542 4577887531 11 135777
Q ss_pred HHHhcCcEEEEecee-------------------CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 222 RIIARKVIYIVKGSF-------------------QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 222 ~L~~~G~~~vs~t~l-------------------~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
+|.+.|..+...... .+..++|++ ..+.+++++++.+++.|+++.+++.+
T Consensus 307 ~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~-~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 307 SLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLT-LGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp HHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEE-CCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEE-CCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 777778744322110 124689997 55667899999999999999887654
No 221
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=98.46 E-value=1.1e-10 Score=127.75 Aligned_cols=172 Identities=12% Similarity=0.029 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 560 CTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 560 ~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
..++++.+.+|+.+.+|++.+ ....++|+|||+++..++.+.... +..|++..-
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~-------~~~v~~~~g~~~a~~~~~~~~~~~-------------------gd~vl~~~p 121 (392)
T 3b1d_A 68 SDELLQAVLDWEKSEHQYSFD-------KEDIVFVEGVVPAISIAIQAFTKE-------------------GEAVLINSP 121 (392)
Confidence 677888889999888885432 135789999999998887765321 124677788
Q ss_pred cchhHHHHHHhCCCceEEEecC-C--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc---cHHHHHHHHHhc
Q psy13453 640 SNSSVEKSAIIGDVPVRQLRSD-D--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD---NLEELGPICQEY 713 (764)
Q Consensus 640 aH~Sv~kAa~~lGl~v~~Vp~d-~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD---pl~eIa~i~~~~ 713 (764)
+|.+...++...|.+++.+|.+ + ++.+|+++|++++++. .+-+|+.+..++.+|.+- ++++|+++|++|
T Consensus 122 ~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~ 196 (392)
T 3b1d_A 122 VYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVEN-----DVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKH 196 (392)
Confidence 8988888888899999999985 3 3569999999998632 133555677788899885 499999999999
Q ss_pred CCEEEEeccccccccccchhhhhhcCC----CcccEEEEcCCccCC-CCcCceee
Q psy13453 714 NIWLHVDAAYAGSALLLPEYAHLKRGL----EYVDSFDFNTHKWLL-VNFDCSAM 763 (764)
Q Consensus 714 glwLHVDaA~Gg~~l~~~~~r~~l~gi----e~aDSit~d~HK~l~-~P~~~g~l 763 (764)
|+++++|.+|+.+..--..... +.++ ...+-+..+++|+++ ..+.+|.+
T Consensus 197 ~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 250 (392)
T 3b1d_A 197 HVILVSDEIHQDLTLFGHEHVS-FNTVSPDFKDFALVLSSATKTFNIAGTKNSYA 250 (392)
Confidence 9999999999875432111111 1111 122456778999987 33345543
No 222
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=98.91 E-value=5.4e-09 Score=120.19 Aligned_cols=191 Identities=8% Similarity=0.031 Sum_probs=132.0
Q ss_pred hHHHHHHHHHHhhcccCcccc-CCchHHHHHHHHHHHHHHHc-C-CCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHH
Q psy13453 535 YPSIVGDMLSGAFGLIGFSWL-SSPACTELEVLVMNWLGKAL-G-LPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRK 611 (764)
Q Consensus 535 ~~~~lad~l~~~lN~n~~~~~-~sp~~t~lE~~v~~~la~ll-G-~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~ 611 (764)
++.++.++....... .|. .......+++.+.+++.+.. + .+.. .....++|+|||+++.+++.+...+
T Consensus 117 ~~~~v~a~~~~~~~~---~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~------~~~~i~~t~G~t~al~~~~~~l~~~ 187 (533)
T 3f6t_A 117 RDKVVAEWVNGAVAN---NYPVPDRCLVNTEKIINYFLQELSYKDANLA------EQTDLFPTEGGTAAIVYAFHSLAEN 187 (533)
T ss_dssp HHHHHHHHHHHHHTC---SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCG------GGEEEEEEEHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHhC---CCCCCcccHHHHHHHHHHHHHHhcCCCCCCC------CcceEEEECCHHHHHHHHHHHhhhh
Confidence 456666665555432 232 34456789999999997773 3 3221 0135789999999998887653222
Q ss_pred HhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCceEEEecC----CCCcccHHHHHHHHHHhhhcCCCceE
Q psy13453 612 MINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVPVRQLRSD----DNGVLRGDALLTAVKEDLAKGLIPCC 687 (764)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d----~~g~md~~~Le~~I~~~~~~G~~p~~ 687 (764)
.+- .+...|+++.-+|.+...++...|.+++.+|++ +++.+|+++|++++.+. +-+
T Consensus 188 ~l~--------------~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~------~k~ 247 (533)
T 3f6t_A 188 HLL--------------KKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPS------IKA 247 (533)
T ss_dssp TSS--------------CTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTT------EEE
T ss_pred hcc--------------CCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCC------CeE
Confidence 111 122368889999999998888899999999885 46889999999988543 447
Q ss_pred EEEeeccCCccccccHH---HHHHHHH-hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 688 LIATLGTTGTCAFDNLE---ELGPICQ-EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 688 VvataGTT~~GaiDpl~---eIa~i~~-~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
|+.+..++.+|.+-+.+ +|+++|+ +||+++++|.+|+.+..-........ ...+-+..+++|.++.|
T Consensus 248 v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~---~~~~i~~~S~SK~~g~~ 318 (533)
T 3f6t_A 248 LIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVV---PYNTMLVYSYSKLFGCT 318 (533)
T ss_dssp EEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHS---GGGEEEEEESHHHHTCG
T ss_pred EEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcC---CCCEEEEecCcccCCCc
Confidence 77778889999995555 8888888 68999999999997543222222211 12357889999988744
No 223
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=98.91 E-value=7.9e-09 Score=112.45 Aligned_cols=220 Identities=14% Similarity=0.063 Sum_probs=148.1
Q ss_pred eeee--HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CC
Q psy13453 20 LIYE--SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NG 92 (764)
Q Consensus 20 ~~YS--v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~ 92 (764)
.|++ +.++++..|... +.||+++++.+|+++|+++|++. ++-+++.+.+++++|.+.|++++++ ++
T Consensus 118 ~~~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~l~~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~ 190 (393)
T 1vjo_A 118 GYFGNRLVDMAGRYGADV---RTISKPWGEVFSLEELRTALETH----RPAILALVHAETSTGARQPLEGVGELCREFGT 190 (393)
T ss_dssp SHHHHHHHHHHHHTTCEE---EEEECCTTCCCCHHHHHHHHHHH----CCSEEEEESEETTTTEECCCTTHHHHHHHHTC
T ss_pred ChhHHHHHHHHHHcCCce---EEEecCCCCCCCHHHHHHHHhhC----CceEEEEeccCCCcceeccHHHHHHHHHHcCC
Confidence 3556 889999999876 99999998999999999999873 1235567888999999999999886 89
Q ss_pred Cceecccccc--------------------c-c-----ceeeeecCCCcccccccc-ccccCCc--------------cc
Q psy13453 93 PLKVGGVLRR--------------------V-Y-----SSCLVPRGQKSLRTTVLF-HFLFQHW--------------QI 131 (764)
Q Consensus 93 wlHVDa~l~~--------------------~-y-----~s~ll~rd~~~l~~~~s~-~~d~~d~--------------tl 131 (764)
|+++|++... + + .++++.++. .+. .+.. ......+ ..
T Consensus 191 ~li~Dea~~~g~~~~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (393)
T 1vjo_A 191 LLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSR-AIE-KLQRRRTKVANWYLDMNLLGKYWGSERV 268 (393)
T ss_dssp EEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCSCSSCEEEEECHH-HHH-HHHTCSSCCSCSTTCHHHHHHHHSTTCC
T ss_pred EEEEECCccccCcCCcccccCccEEEEcCcccccCCCceEEEEECHH-HHH-HHhccCCCCCceecCcHhhhhhhccCCC
Confidence 9999996430 0 0 012222111 000 0000 0000011 11
Q ss_pred CC-CC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC---ceeEEEEeecccccccccccc
Q psy13453 132 PL-GR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS---MGLVCFRLKVRFWDKLDNLFG 206 (764)
Q Consensus 132 e~-SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~---l~iV~Fry~P~~~~~~~~~~~ 206 (764)
.+ +. ......++++++.+..+++.++.++..++++++.+.|++. +++++.+.. .++++|++. .
T Consensus 269 ~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-~---------- 336 (393)
T 1vjo_A 269 YHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLSLHVEKEYRLPTLTTVCIP-D---------- 336 (393)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECC-T----------
T ss_pred CCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCcccCCccccCCcEEEEEcC-C----------
Confidence 11 22 2223356777877767788999999999999999999997 888766432 356777652 1
Q ss_pred CccCCccHHHHHHHHHHHhc-CcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 207 TISFGDNDLNKAVYDRIIAR-KVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 207 ~~~~~~d~~n~~L~~~L~~~-G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
+.+ ..++.++|.++ |..+.......+..++|+++....+++++++.+++.|+++
T Consensus 337 ----~~~--~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~ 391 (393)
T 1vjo_A 337 ----GVD--GKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQV 391 (393)
T ss_dssp ----TCC--HHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred ----CCC--HHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHH
Confidence 111 24688888887 8765544433345789998777788899999999999875
No 224
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=98.91 E-value=1.7e-08 Score=112.73 Aligned_cols=169 Identities=15% Similarity=0.097 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccC-ceEEEecCCc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRN-KLVAYTSDQS 640 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~-~~vi~~S~~a 640 (764)
....++.+.+++++|.+ ..+||+|||+||..|+.++|.......+.. .+ +-+|+....-
T Consensus 107 ~~~~~l~~~la~~~g~~-----------~v~~~~sGseA~~~al~~a~~~~~~~~g~~---------~gr~~vi~~~~~y 166 (433)
T 1z7d_A 107 VPLGICERYLTNLLGYD-----------KVLMMNTGAEANETAYKLCRKWGYEVKKIP---------ENMAKIVVCKNNF 166 (433)
T ss_dssp HHHHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHHHHHHHHHTSCCC---------TTCCEEEEETTC-
T ss_pred HHHHHHHHHHHhhcCCC-----------eEEEeCCHHHHHHHHHHHHHHHhhhccCCC---------CCCCeEEEEeCCc
Confidence 34455556777777642 478999999999999999885432110000 01 2355555567
Q ss_pred chhHHHHHHhCC------------CceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc----cHH
Q psy13453 641 NSSVEKSAIIGD------------VPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD----NLE 704 (764)
Q Consensus 641 H~Sv~kAa~~lG------------l~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD----pl~ 704 (764)
|.+...++.+.| ..+..+|.+ |+++|+++|+. ..+.+|++.--...+|.+- +++
T Consensus 167 hg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~ 236 (433)
T 1z7d_A 167 SGRTLGCISASTTKKCTSNFGPFAPQFSKVPYD-----DLEALEEELKD-----PNVCAFIVEPIQGEAGVIVPSDNYLQ 236 (433)
T ss_dssp -------------------------CEEEECTT-----CHHHHHHHHTS-----TTEEEEEECSSBSTTTSBCCCTTHHH
T ss_pred CCcchhhhcccCCccccccCCCCCCCeEEeCCC-----CHHHHHHHhCC-----CCEEEEEEECCCCCCCccCCCHHHHH
Confidence 776665555544 245556542 89999999851 1244666655445578764 899
Q ss_pred HHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 705 ELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 705 eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+|+++|++||++|++|.+|.++......+.....|+ ..|.+| +.|+++.. +..|++
T Consensus 237 ~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~t--~sK~l~~G~~~~G~v 293 (433)
T 1z7d_A 237 GVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNV-KPDVIL--LGKALSGGHYPISAV 293 (433)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEE--ECGGGGTTSSCCEEE
T ss_pred HHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCC-CCCEEE--ECccccCCCCCeEEE
Confidence 999999999999999999986322111111112233 468765 56998854 456665
No 225
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=98.91 E-value=4.5e-08 Score=108.53 Aligned_cols=164 Identities=14% Similarity=0.093 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.++++++++- . ...+||+|||+||..|+.+||... + ++.+|......|
T Consensus 93 ~~~~~la~~l~~~~~~-~---------~~v~~~~sGsea~~~al~~a~~~~-~---------------~~~ii~~~~~yh 146 (429)
T 4e77_A 93 EMEVKMAQLVTDLVPT-M---------DMVRMVNSGTEATMSAIRLARGYT-G---------------RDKIIKFEGCYH 146 (429)
T ss_dssp HHHHHHHHHHHHHSTT-C---------SEEEEESSHHHHHHHHHHHHHHHH-C---------------CCEEEEETTCCC
T ss_pred HHHHHHHHHHHhhCCC-C---------CEEEEeCcHHHHHHHHHHHHHHhh-C---------------CCEEEEEcCccC
Confidence 4556667788888862 2 257999999999999999887542 1 123455555666
Q ss_pred hhHHHHHHhCC-------------C------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc
Q psy13453 642 SSVEKSAIIGD-------------V------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN 702 (764)
Q Consensus 642 ~Sv~kAa~~lG-------------l------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp 702 (764)
-....+....| + .+..+|.+ |+++|+++|++. +..+.+|++.--+...|.+.+
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~---~~~~~~vi~ep~~~~~g~~~~ 218 (429)
T 4e77_A 147 GHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYN-----DLASVRQAFEQY---PQEVACIIVEPVAGNMNCIPP 218 (429)
T ss_dssp C------------------CCCTTSCGGGGTTEEEECTT-----CHHHHHHHHHHS---TTTEEEEEECSSBCTTSCBCC
T ss_pred CCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCC-----CHHHHHHHHHhc---CCCEEEEEECCccCCCCCcCC
Confidence 55443222111 1 12222221 799999999753 123456666655566788887
Q ss_pred ----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 703 ----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 703 ----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+++|+++|++||++|++|.+|+++ .....+.....|+ ..|-++++ |.++..+..|++
T Consensus 219 ~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~-~pdi~t~s--K~~~~G~~~G~~ 279 (429)
T 4e77_A 219 LPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHV-IPDLTCLG--KIIGGGMPVGAF 279 (429)
T ss_dssp CTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTC-CCSEEEEE--GGGGTTSCCEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCC-CCCeeeec--ccccCCCCeEEE
Confidence 999999999999999999999965 3222222222344 34766555 988865666654
No 226
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=98.90 E-value=7.5e-09 Score=114.64 Aligned_cols=166 Identities=13% Similarity=0.007 Sum_probs=108.9
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 560 CTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 560 ~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
......++.+++++.++ +. ...+||+|||+||..|+++||... . ++-+|+....
T Consensus 90 ~~~~~~~la~~l~~~~~-~~---------~~v~~~~ggsea~~~al~~a~~~~--~--------------~~~vi~~~~~ 143 (427)
T 3fq8_A 90 PCALENVLAEMVNDAVP-SI---------EMVRFVNSGTEACMAVLRIMRAYT--G--------------RDKIIKFEGC 143 (427)
T ss_dssp CCHHHHHHHHHHHHHST-TC---------SEEEEESSHHHHHHHHHHHHHHHH--C--------------CCEEEEEETC
T ss_pred CCHHHHHHHHHHHHhCC-CC---------CEEEEeCCHHHHHHHHHHHHHHhh--C--------------CCEEEEECCC
Confidence 34566777889999887 22 357999999999999999887542 1 1224444445
Q ss_pred cchhHHHHHHhCCC-------------------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc
Q psy13453 640 SNSSVEKSAIIGDV-------------------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF 700 (764)
Q Consensus 640 aH~Sv~kAa~~lGl-------------------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai 700 (764)
-|.+...+....|. .+..+|.+ |+++|++++++.. ..+.+|++...++.+|.+
T Consensus 144 yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~---~~~~~vi~~p~~~~~G~~ 215 (427)
T 3fq8_A 144 YHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN-----DLEAVKALFAENP---GEIAGVILEPIVGNSGFI 215 (427)
T ss_dssp CCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT-----CHHHHHHHHHHST---TTEEEEEECSSBCTTSCB
T ss_pred cCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCC-----CHHHHHHHHHhCC---CCEEEEEEcCCcCCCCCc
Confidence 55333222111111 13444432 8999999997632 235677777777778999
Q ss_pred cc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 701 DN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 701 Dp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
-+ +++|+++|++||++|++|.+|+++ .....+.....++ ..|-++++ |.++.-+..|++
T Consensus 216 ~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~~di~t~s--K~~~~G~~~G~~ 278 (427)
T 3fq8_A 216 VPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGGVQEKFGV-TPDLTTLG--KIIGGGLPVGAY 278 (427)
T ss_dssp CCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTC-CCSEEEEC--GGGGTTSSCEEE
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchhhHhcCC-CCChhhhh--hhhhCCcceEEE
Confidence 88 999999999999999999999965 3222222223344 35777766 988754446654
No 227
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=98.90 E-value=2.7e-08 Score=110.98 Aligned_cols=177 Identities=13% Similarity=0.043 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
...++.+.++++++.+. ...+||+|||+||..++.+++.....+ +.. .++-+|+.+...|.
T Consensus 94 ~~~~l~~~la~~~~~~~---------~~v~~~~ggsea~~~al~~~~~~~~~~-g~~---------~~~~vi~~~~~yhg 154 (449)
T 3a8u_X 94 LSFQLAEKITDLTPGNL---------NHVFFTDSGSECALTAVKMVRAYWRLK-GQA---------TKTKMIGRARGYHG 154 (449)
T ss_dssp HHHHHHHHHHTTSSTTE---------EEEEEESSHHHHHHHHHHHHHHHHHHT-TCT---------TCCEEEEETTCCCC
T ss_pred HHHHHHHHHHHhCCCCC---------CEEEEcCcHHHHHHHHHHHHHHHHHhc-CCC---------CCCEEEEECCCcCC
Confidence 34456677777776543 257899999999999999887643211 000 01335666778887
Q ss_pred hHHHHHHhCCC------------ceEEEecCCCCc-----cc--------HHHHHHHHHHhhhcCCCceEEEEeeccCCc
Q psy13453 643 SVEKSAIIGDV------------PVRQLRSDDNGV-----LR--------GDALLTAVKEDLAKGLIPCCLIATLGTTGT 697 (764)
Q Consensus 643 Sv~kAa~~lGl------------~v~~Vp~d~~g~-----md--------~~~Le~~I~~~~~~G~~p~~VvataGTT~~ 697 (764)
+...++...|. .++.|+++..++ +| +++|+++|++.. ...+.+|+++--.+.+
T Consensus 155 ~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~--~~~~~~vi~~p~~~~t 232 (449)
T 3a8u_X 155 VNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHD--ASNIAAVFVEPLAGSA 232 (449)
T ss_dssp SSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTT
T ss_pred CChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcC--CCCEEEEEEcCccCCC
Confidence 76666666542 456676543222 56 999999997531 0124566665545568
Q ss_pred ccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 698 CAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 698 GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
|.+-| +++|+++|++||++|++|.+|.++...-..+.....++ ..|.+++ .|+++.- +..|++
T Consensus 233 G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~di~s~--sK~l~~G~~~~G~~ 300 (449)
T 3a8u_X 233 GVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGV-TPDLMCI--AKQVTNGAIPMGAV 300 (449)
T ss_dssp TCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSSCCEEE
T ss_pred CCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCC-CCCEEEE--cccccCCCCceEEE
Confidence 98877 99999999999999999999965322111111112233 3576655 5988742 235654
No 228
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=98.90 E-value=2.6e-08 Score=108.18 Aligned_cols=218 Identities=12% Similarity=0.047 Sum_probs=142.9
Q ss_pred HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceecc
Q psy13453 24 SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGG 98 (764)
Q Consensus 24 v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa 98 (764)
+..++...|... +.||+++++.+|+++|+++|++. +-+++.+.+++++|.+.|++++++ ++++++|+
T Consensus 130 ~~~~~~~~g~~~---~~~~~~~~~~~d~~~l~~~l~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~ 201 (406)
T 1kmj_A 130 WQMLCARVGAEL---RVIPLNPDGTLQLETLPTLFDEK-----TRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDG 201 (406)
T ss_dssp HHHHHHHHTCEE---EEECBCTTSCBCGGGHHHHCCTT-----EEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHhCCCEE---EEEecCCCCCcCHHHHHHHhccC-----CeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEc
Confidence 345678888876 99999988999999999999642 224467788999999999999876 88999999
Q ss_pred cccc--------------------c----cc-eeeeecCCCccccccccccccC--------C---------cccC-CCC
Q psy13453 99 VLRR--------------------V----YS-SCLVPRGQKSLRTTVLFHFLFQ--------H---------WQIP-LGR 135 (764)
Q Consensus 99 ~l~~--------------------~----y~-s~ll~rd~~~l~~~~s~~~d~~--------d---------~tle-~SR 135 (764)
+... + .+ ++++.++ +... .+......+ . +.++ ++.
T Consensus 202 ~~~~g~~~~~~~~~~~d~~~~s~~K~~g~~G~G~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (406)
T 1kmj_A 202 AQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKE-ALLQ-EMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTP 279 (406)
T ss_dssp TTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECH-HHHH-HCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSC
T ss_pred hhhcCCCCCcccccCCCEEEEEchhccCCCCcEEEEEeH-HHHh-hcCCcccCCCceeecccccccccCCCchhccCCCC
Confidence 5311 0 01 2332221 1000 000000000 0 0111 112
Q ss_pred cc-cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC-CceeEEEEeeccccccccccccCccCCcc
Q psy13453 136 RF-RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP-SMGLVCFRLKVRFWDKLDNLFGTISFGDN 213 (764)
Q Consensus 136 r~-~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P-~l~iV~Fry~P~~~~~~~~~~~~~~~~~d 213 (764)
.. .++.+.+++..+..+++.++.++..++++++.+.|++.|+++++.++ ..++++|++. +.+
T Consensus 280 ~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~----------------~~~ 343 (406)
T 1kmj_A 280 NTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLG----------------KHH 343 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEEEEET----------------TCC
T ss_pred CHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEEEEEC----------------CCC
Confidence 11 12234466677766788889999999999999999999999987653 6778888642 111
Q ss_pred HHHHHHHHHHHhcCcEEEEece--------eCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 214 DLNKAVYDRIIARKVIYIVKGS--------FQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 214 ~~n~~L~~~L~~~G~~~vs~t~--------l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
..++.+.|.+.|..+..... +....++|+++. ..+++++++.+++.|+++.+.+
T Consensus 344 --~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~-~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 344 --AYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLA-MYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp --HHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEee-cCCCHHHHHHHHHHHHHHHHhh
Confidence 23577888888876543321 222468999766 4568999999999999887653
No 229
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=98.89 E-value=1.2e-08 Score=109.19 Aligned_cols=216 Identities=9% Similarity=-0.025 Sum_probs=142.5
Q ss_pred eee--HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc------CC
Q psy13453 21 IYE--SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS------NG 92 (764)
Q Consensus 21 ~YS--v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~------~~ 92 (764)
+|| +...+...|... +.||++.++.+|+++|+ +++ ++-+++.+.+++++|.+.|++++++ ++
T Consensus 93 ~~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~--~~~-----~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~ 162 (362)
T 3ffr_A 93 SFSKRFYEFAGELGREA---YKEEAAFGKGFYPADIT--VPA-----DAEIICLTHNETSSGVSMPVEDINTFRDKNKDA 162 (362)
T ss_dssp HHHHHHHHHHHHTTCEE---EEEECCTTCCCCGGGCC--CCT-----TCCEEEEESEETTTTEECCHHHHTTSGGGSTTS
T ss_pred HHHHHHHHHHHHhCCCe---EEEecCCCCCCCHHHHh--ccC-----CccEEEEEcCCCCcceeCCHHHHHHHHHhCCCC
Confidence 566 445677788766 99999989999999998 322 2335567788999999999999775 68
Q ss_pred Cceeccccccc---c----ceeeeecCCCccc---c-cc-ccccc-----------------cCC----------cccCC
Q psy13453 93 PLKVGGVLRRV---Y----SSCLVPRGQKSLR---T-TV-LFHFL-----------------FQH----------WQIPL 133 (764)
Q Consensus 93 wlHVDa~l~~~---y----~s~ll~rd~~~l~---~-~~-s~~~d-----------------~~d----------~tle~ 133 (764)
|+++|++.... + ..++...-.+.+. + .+ ....+ +.+ ....+
T Consensus 163 ~li~D~a~~~~~~~~~~~~~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~ 242 (362)
T 3ffr_A 163 LIFVDAVSSLPYPKFDWTKIDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPE 242 (362)
T ss_dssp EEEEECTTTTTSSCCCTTSCSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSS
T ss_pred EEEEecccccCCcccChhHCcEEEEecccccCCCCceEEEEECHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCC
Confidence 99999853110 0 1111111111111 0 00 00000 000 01122
Q ss_pred CC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC-C---CceeEEEEeeccccccccccccCc
Q psy13453 134 GR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCP-P---SMGLVCFRLKVRFWDKLDNLFGTI 208 (764)
Q Consensus 134 SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~-P---~l~iV~Fry~P~~~~~~~~~~~~~ 208 (764)
+. ......++++++.+..+|+.++.++..++++++.+.|+++|+++++.+ + ...+++|+..
T Consensus 243 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~-------------- 308 (362)
T 3ffr_A 243 TPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTT-------------- 308 (362)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEES--------------
T ss_pred CchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecC--------------
Confidence 22 233346678888888888999999999999999999999999999862 2 2456777653
Q ss_pred cCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 209 SFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 209 ~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
+ -..++.++|.++|..........+..++|+++.. .+++++++.+++.|+++
T Consensus 309 --~---~~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~~-~~~~e~i~~l~~~l~~~ 360 (362)
T 3ffr_A 309 --M---LPGEINKILEPFDMAVGAGYGSKKETQIRIANFP-AHSLEQVHKLVQTLKEK 360 (362)
T ss_dssp --S---CHHHHHHHHGGGTEEEEECSGGGTTTEEEEECCT-TSCHHHHHHHHHHHHHH
T ss_pred --C---CHHHHHHHHHHCCeEEecCccccCCCEEEEECCC-CCCHHHHHHHHHHHHHH
Confidence 1 1257888999998765543333345689998766 56789999999999875
No 230
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=98.89 E-value=5.8e-08 Score=106.67 Aligned_cols=183 Identities=14% Similarity=0.019 Sum_probs=119.1
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcE--EEeCChHHHHHHHHHHHHHHHhhhhccCCCCCcccccc
Q psy13453 552 FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGG--IIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIR 629 (764)
Q Consensus 552 ~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~G--vfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~ 629 (764)
..|...+...++.+.+.+|+. |...... ..... ..|.|||+++..+..+++... .
T Consensus 73 ~~y~~~~g~~~lr~~ia~~~~---~~~~~~~----~~~~i~~~~~~~g~ga~~~~~~~~~~~~----------------~ 129 (409)
T 4eu1_A 73 MDYAPVTGIASFVEEAQKLCF---GPTCAAL----RDGRIASCQTLGGTGALRIGGDLLNRFV----------------A 129 (409)
T ss_dssp CCCCCTTCCHHHHHHHHHHHH---CSSCHHH----HTTCEEEEEESHHHHHHHHHHHHGGGTS----------------S
T ss_pred ccCCCCCCcHHHHHHHHHHHc---CCCchhh----ccCceeeeecccchHHHHHHHHHHHHhc----------------C
Confidence 444444555677777777773 4321000 00123 358999999866544332110 1
Q ss_pred CceEEEecCCcchhHHHHHHhCCCceEEEec--CCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HH
Q psy13453 630 NKLVAYTSDQSNSSVEKSAIIGDVPVRQLRS--DDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LE 704 (764)
Q Consensus 630 ~~~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~--d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~ 704 (764)
+...|++..-+|.+....++..|.+++.+|. ++++.+|+++|++++++.. ..+.+++.+..++.+|.+-+ ++
T Consensus 130 ~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~i~~~~p~NPtG~~~~~~~l~ 206 (409)
T 4eu1_A 130 NCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAP---EGSVILVHACAHNPTGVDPTHDDWR 206 (409)
T ss_dssp SCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSC---TTCEEEEESSSCTTTCCCCCHHHHH
T ss_pred CCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCC---CCcEEEEECCCCCCCCCCCCHHHHH
Confidence 1235788889999999999999999999998 3568999999999997531 13456666778899998855 66
Q ss_pred HHHHHHHhcCCEEEEeccccccccccc-----hhhhhhcCCCccc-EEEEcCCccCCCC-cCcee
Q psy13453 705 ELGPICQEYNIWLHVDAAYAGSALLLP-----EYAHLKRGLEYVD-SFDFNTHKWLLVN-FDCSA 762 (764)
Q Consensus 705 eIa~i~~~~glwLHVDaA~Gg~~l~~~-----~~r~~l~gie~aD-Sit~d~HK~l~~P-~~~g~ 762 (764)
+|+++|++||+|+++|.+|+.+..--. ...... +. ..+ -+..+++|.++.| ..+|.
T Consensus 207 ~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~-~~-~~~~i~~~S~SK~~g~~G~riG~ 269 (409)
T 4eu1_A 207 QVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLV-DM-VPNLIVAQSFSKNFGLYGHRCGA 269 (409)
T ss_dssp HHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHH-TT-SSCCEEEEECTTTSSCGGGCCEE
T ss_pred HHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHH-hh-CCcEEEEecCcccccCccCCceE
Confidence 699999999999999999987543210 111111 11 123 3455888988754 23444
No 231
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=98.88 E-value=2.5e-08 Score=111.58 Aligned_cols=168 Identities=11% Similarity=-0.023 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchh
Q psy13453 564 EVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSS 643 (764)
Q Consensus 564 E~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~S 643 (764)
..++.+++++++|.+ ..+||+|||+||..|+.++|.......+.. + .++-+|+....-|.+
T Consensus 120 ~~~l~~~la~~~g~~-----------~v~~~~sGseA~~~al~~~~~~~~~~~g~~-~-------g~~~vi~~~~~yhg~ 180 (439)
T 2oat_A 120 LGEYEEYITKLFNYH-----------KVLPMNTGVEAGETACKLARKWGYTVKGIQ-K-------YKAKIVFAAGNFWGR 180 (439)
T ss_dssp HHHHHHHHHHHHTCS-----------EEEEESSHHHHHHHHHHHHHHHHHHTTCCC-T-------TCCEEEEETTCCCCS
T ss_pred HHHHHHHHHHhcCCC-----------EEEEeCCHHHHHHHHHHHHHHHhhhccCCC-C-------CCCeEEEEcCCCCCC
Confidence 344455666666632 478999999999999999886432110000 0 012356666677877
Q ss_pred HHHHHHhCC------------CceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc----cHHHHH
Q psy13453 644 VEKSAIIGD------------VPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD----NLEELG 707 (764)
Q Consensus 644 v~kAa~~lG------------l~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD----pl~eIa 707 (764)
...++...| ..+..+|.+ |+++|+++|+. ..+.+|++.--...+|.+- ++++|+
T Consensus 181 ~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~ 250 (439)
T 2oat_A 181 TLSAISSSTDPTSYDGFGPFMPGFDIIPYN-----DLPALERALQD-----PNVAAFMVEPIQGEAGVVVPDPGYLMGVR 250 (439)
T ss_dssp SHHHHTTCCCHHHHTTSCSCCTTEEEECSS-----CHHHHHHHTTS-----TTEEEEEECSSBTTTTSBCCCTTHHHHHH
T ss_pred CHhHhhcCCChhcccCCCCCCCCeEEeCCC-----CHHHHHHHhCC-----CCEEEEEEECCCCCCCCcCCCHHHHHHHH
Confidence 776666655 356677653 79999998852 1244666555445578665 899999
Q ss_pred HHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 708 PICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 708 ~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
++|++||++|++|.+|.++......+.....|+ ..|.+ +++|+++.. +..|++
T Consensus 251 ~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~-~~Di~--t~sK~l~~G~~~~G~v 304 (439)
T 2oat_A 251 ELCTRHQVLFIADEIQTGLARTGRWLAVDYENV-RPDIV--LLGKALSGGLYPVSAV 304 (439)
T ss_dssp HHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEE--EECGGGGTTSSCCEEE
T ss_pred HHHHHcCCEEEEeccccCCccCCcchhHHHhCC-CCcEE--EecccccCCCCCeEEE
Confidence 999999999999999976321111111112244 45866 556998865 456665
No 232
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=98.88 E-value=2.1e-08 Score=108.96 Aligned_cols=224 Identities=14% Similarity=0.059 Sum_probs=146.3
Q ss_pred eeeH--HHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCC
Q psy13453 21 IYES--FKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 21 ~YSv--~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
|+|. .+.+...|... +.||+++++++|+++|+++|++.. ++-+++.+.+++++|.+.|++++.+ ++|
T Consensus 93 ~~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~l~~~~---~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~ 166 (392)
T 2z9v_A 93 VYGKGFGYWAKRYSPHL---LEIEVPYNEAIDPQAVADMLKAHP---EITVVSVCHHDTPSGTINPIDAIGALVSAHGAY 166 (392)
T ss_dssp HHHHHHHHHHHHHCSCE---EEEECCTTSCCCHHHHHHHHHHCT---TCCEEEEESEEGGGTEECCHHHHHHHHHHTTCE
T ss_pred cccHHHHHHHHHcCCce---EEeeCCCCCCCCHHHHHHHHhcCC---CCcEEEEeccCCCCceeccHHHHHHHHHHcCCe
Confidence 5554 35556678865 999999889999999999997521 2234567889999999999999876 899
Q ss_pred ceecccccc--------------------c--cc----eeeeecCCCcccccccc-c--c--ccCC-------c----cc
Q psy13453 94 LKVGGVLRR--------------------V--YS----SCLVPRGQKSLRTTVLF-H--F--LFQH-------W----QI 131 (764)
Q Consensus 94 lHVDa~l~~--------------------~--y~----s~ll~rd~~~l~~~~s~-~--~--d~~d-------~----tl 131 (764)
+++|++... + ++ ++++.++. ... .+.. . . .+.+ + ..
T Consensus 167 li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~~-~~~-~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 244 (392)
T 2z9v_A 167 LIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLGAPPGLTMMGVSER-AWA-KMKANPLAPRASMLSIVDWENAWSRDKPF 244 (392)
T ss_dssp EEEECTTTBTTBSCCGGGGTCSEEEECSSSTTCCCSCCEEEEECHH-HHH-HHHTCTTSCCSSTTCSGGGTTTTSTTSCC
T ss_pred EEEEcccccCCcccccccccceEEEecCcccccCCCceeEEEECHH-HHH-HhhhccCCCCceeccHHHHHhhhcccCCC
Confidence 999996321 1 00 12222211 000 0000 0 0 0000 0 01
Q ss_pred CCCCccc-HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC----CceeEEEEeecccccccccccc
Q psy13453 132 PLGRRFR-ALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP----SMGLVCFRLKVRFWDKLDNLFG 206 (764)
Q Consensus 132 e~SRr~~-ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P----~l~iV~Fry~P~~~~~~~~~~~ 206 (764)
.++.... .+.+++++..+...|+.++.++..++++++.+.|++. +++++.++ ..++++|++. .
T Consensus 245 ~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-~---------- 312 (392)
T 2z9v_A 245 PFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM-GLSVWAASDSIASPTTTAVRTP-D---------- 312 (392)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSGGGBCTTEEEEECC-T----------
T ss_pred CCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-CCeeccCCccccCCceEEEECC-C----------
Confidence 1122111 2355777887777779999999999999999999987 88877633 3567788752 1
Q ss_pred CccCCccHHHHHHHHHHHhc-CcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 207 TISFGDNDLNKAVYDRIIAR-KVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 207 ~~~~~~d~~n~~L~~~L~~~-G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
+.+ ..++.++|.++ |..+.......+..++|+++..+.+++++++.+++.|+++.+++
T Consensus 313 ----~~~--~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~ 371 (392)
T 2z9v_A 313 ----GVD--EKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNAA 371 (392)
T ss_dssp ----TCC--HHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred ----CCC--HHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHHc
Confidence 111 24678888887 87654433223456899986666789999999999999887654
No 233
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=98.87 E-value=2.3e-08 Score=110.92 Aligned_cols=163 Identities=13% Similarity=0.051 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
...++.+++++.++ +. ...+||+|||+||..|+.+++... + ++-+|.....-|.
T Consensus 96 ~~~~l~~~la~~~~-~~---------~~v~~~~sGsea~~~ai~~a~~~~-~---------------~~~vi~~~~~yhg 149 (434)
T 3l44_A 96 LEVKFAKMLKEAMP-AL---------DKVRFVNSGTEAVMTTIRVARAYT-G---------------RTKIMKFAGCYHG 149 (434)
T ss_dssp HHHHHHHHHHHHCT-TC---------SEEEEESSHHHHHHHHHHHHHHHH-C---------------CCEEEEETTCCCC
T ss_pred HHHHHHHHHHHhCC-CC---------CEEEEeCchHHHHHHHHHHHHHhh-C---------------CCEEEEEcCccCC
Confidence 44556667888875 22 257999999999999999887642 1 1224444555554
Q ss_pred hHHHHHHhCCC-------------------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc-
Q psy13453 643 SVEKSAIIGDV-------------------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN- 702 (764)
Q Consensus 643 Sv~kAa~~lGl-------------------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp- 702 (764)
+...+....|. .+..+|.+ |+++|+++|++... .+.+|++.-.++.+|.+-+
T Consensus 150 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~~~~ 221 (434)
T 3l44_A 150 HSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFN-----NVETLKEALDKWGH---EVAAILVEPIVGNFGIVEPK 221 (434)
T ss_dssp SSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTT-----CHHHHHHHHHHHGG---GEEEEEECSSBCTTSCBCCC
T ss_pred CcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcc-----cHHHHHHHHHhCCC---CEEEEEEcCCCCCCCCccCC
Confidence 33322222221 23333322 79999999976321 2456666666667788887
Q ss_pred ---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 703 ---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 703 ---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+++|+++|++||++||+|.+|.++ .....+.....++ ..|.++++ |.++.++.+|.+
T Consensus 222 ~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~-~~di~t~s--K~~~~G~~iG~~ 281 (434)
T 3l44_A 222 PGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGV-TPDLTALG--KVIGGGLPIGAY 281 (434)
T ss_dssp TTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTC-CCSEEEEE--GGGGTTSSCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcCC-CCCeeehh--hhhcCCcCeeeE
Confidence 999999999999999999999875 3222111122244 35766655 888776777764
No 234
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=98.87 E-value=1.6e-08 Score=112.23 Aligned_cols=163 Identities=12% Similarity=0.012 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
...++.++++++++ .. ...+||+|||+||..|+.+++... + ++.+|+.....|.
T Consensus 94 ~~~~l~~~la~~~~-~~---------~~v~~~~~Gsea~~~ai~~a~~~~-~---------------~~~vi~~~~~yhg 147 (429)
T 3k28_A 94 IENKLAKLVIERVP-SI---------EIVRMVNSGTEATMSALRLARGYT-G---------------RNKILKFIGCYHG 147 (429)
T ss_dssp HHHHHHHHHHHHST-TC---------SEEEEESSHHHHHHHHHHHHHHHH-T---------------CCEEEEEETCCCC
T ss_pred HHHHHHHHHHHhCC-CC---------CEEEEeCChHHHHHHHHHHHHHhh-C---------------CCEEEEECCCcCC
Confidence 34455667777775 22 257899999999999999987642 1 1224555555564
Q ss_pred hHHHHHHhCCCc-------------------eEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc-
Q psy13453 643 SVEKSAIIGDVP-------------------VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN- 702 (764)
Q Consensus 643 Sv~kAa~~lGl~-------------------v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp- 702 (764)
+...+....|.. +..+|.+ |+++|++++++.. ..+.+|++.-.++..|.+-+
T Consensus 148 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~ 219 (429)
T 3k28_A 148 HGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYN-----DLESVKYAFEQFG---DDIACVIVEPVAGNMGVVPPQ 219 (429)
T ss_dssp SCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETT-----CHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCC
T ss_pred CcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCC-----CHHHHHHHHHhCC---CCEEEEEEcCCCCCCCcccCC
Confidence 443333323322 2233322 7999999997632 13456666666667888888
Q ss_pred ---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 703 ---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 703 ---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+++|+++|++||++||+|.+|.++ ...........|+ ..|-++++ |.++..+.+|++
T Consensus 220 ~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~~di~t~s--K~~~~G~~iG~~ 279 (429)
T 3k28_A 220 PGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGV-TPDLTCLG--KVIGGGLPVGAY 279 (429)
T ss_dssp TTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTC-CCSEEEEC--GGGGTTSCCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHhCC-CCceehhh--hhhcCCCCeEEE
Confidence 999999999999999999999875 2221111122243 35766654 888766666654
No 235
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=98.86 E-value=1.2e-08 Score=110.87 Aligned_cols=223 Identities=15% Similarity=0.068 Sum_probs=141.6
Q ss_pred HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceecc
Q psy13453 24 SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGG 98 (764)
Q Consensus 24 v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa 98 (764)
+.+.+...|... +.||+++++.+|+++|+++|++. ++-+++.+.+++++|.+.|++++++ ++|+++|+
T Consensus 109 ~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~i~~~----~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~ 181 (393)
T 2huf_A 109 SADMATRYGADV---RVVKSKVGQSLSLDEIRDALLIH----KPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDT 181 (393)
T ss_dssp HHHHHHHTTCEE---EEEECCTTCCCCHHHHHHHHHHH----CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHcCCee---EEEeCCCCCCCCHHHHHHHHhcc----CCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEc
Confidence 345566678765 99999988999999999999863 1235567788999999999999876 89999999
Q ss_pred ccccc--------cc-eeeeecCCCccc---cc-c-ccccc-------c----CCcc---------c-----C----CCC
Q psy13453 99 VLRRV--------YS-SCLVPRGQKSLR---TT-V-LFHFL-------F----QHWQ---------I-----P----LGR 135 (764)
Q Consensus 99 ~l~~~--------y~-s~ll~rd~~~l~---~~-~-s~~~d-------~----~d~t---------l-----e----~SR 135 (764)
+.... +. .++...-.+.+. .. + ....+ . ..|. . . ++-
T Consensus 182 a~~~~~~~~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (393)
T 2huf_A 182 VASLGGAPMFMDRWEIDAMYTGSQKVLGAPPGITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTI 261 (393)
T ss_dssp TTTBTTBCCCTTTTTCSEEECCSSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCC
T ss_pred ccccCCCCcchhhcCccEEEECCCcccccCCCeEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCC
Confidence 63110 00 111111111111 00 0 00000 0 0110 0 0 111
Q ss_pred ccc-HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC--ce-eEEEEeeccccccccccccCccCC
Q psy13453 136 RFR-ALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS--MG-LVCFRLKVRFWDKLDNLFGTISFG 211 (764)
Q Consensus 136 r~~-ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~--l~-iV~Fry~P~~~~~~~~~~~~~~~~ 211 (764)
... ...+.++++.+..+|+.++.++..++++++.+.|++. +++++.++. .+ +++|++.. .
T Consensus 262 ~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~---------------~ 325 (393)
T 2huf_A 262 SSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDA-GFELYADPKDRLSTVTTIKVPQ---------------G 325 (393)
T ss_dssp CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCTTEEEEECCT---------------T
T ss_pred CHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCccccCCcEEEEEcCC---------------C
Confidence 111 2234557777766788999999999999999999998 888766542 33 77776521 1
Q ss_pred ccHHHHHHHHHHHhc-CcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 212 DNDLNKAVYDRIIAR-KVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 212 ~d~~n~~L~~~L~~~-G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
.+ ..++.++|.++ |..........+..++|+++....+++++++.+++.|+++.+++.
T Consensus 326 ~~--~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~ 384 (393)
T 2huf_A 326 VD--WLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVK 384 (393)
T ss_dssp CC--HHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred CC--HHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 11 24677788765 864332222123568999887778899999999999999887763
No 236
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=98.86 E-value=1.8e-08 Score=107.77 Aligned_cols=152 Identities=11% Similarity=-0.023 Sum_probs=110.8
Q ss_pred HHHHHHHHHHcC---CCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 565 VLVMNWLGKALG---LPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 565 ~~v~~~la~llG---~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
.++.+.+++++| .++ ...+||+|+|+++..++.+. . ..|++. -+|
T Consensus 59 ~~lr~~la~~~~~~~~~~---------~~v~~~~G~~~al~~~~~~~-----g-----------------d~Vl~~-p~y 106 (335)
T 1uu1_A 59 EELIEKILSYLDTDFLSK---------NNVSVGNGADEIIYVMMLMF-----D-----------------RSVFFP-PTY 106 (335)
T ss_dssp HHHHHHHHHHHTCSSCCG---------GGEEEESSHHHHHHHHHHHS-----S-----------------EEEECS-SSC
T ss_pred HHHHHHHHHHcCCCCCCH---------HHEEEcCChHHHHHHHHHHh-----C-----------------CcEEEC-CCc
Confidence 345556666666 543 36899999999988777654 1 136677 889
Q ss_pred hhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEEec
Q psy13453 642 SSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHVDA 721 (764)
Q Consensus 642 ~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHVDa 721 (764)
.+....+...|.+++.+|.++++.+|+++| + .+-+|+.+..++.+|.+-|.+++.++++.+| ++++|.
T Consensus 107 ~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l-----~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De 174 (335)
T 1uu1_A 107 SCYRIFAKAVGAKFLEVPLTKDLRIPEVNV-----G------EGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDE 174 (335)
T ss_dssp HHHHHHHHHHTCEEEECCCCTTSCCCCCCC-----C------TTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEEC
T ss_pred HHHHHHHHHcCCeEEEeccCCCCCCCHHHc-----C------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEEC
Confidence 899899999999999999988888998887 1 2446776788999999999999999999989 999999
Q ss_pred cccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 722 AYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 722 A~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+|+.+..- .....+. ....+-+..++||+++.| ..+|++
T Consensus 175 ~~~~~~~~--~~~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~ 214 (335)
T 1uu1_A 175 AYYEFHGE--SYVDFLK-KYENLAVIRTFSKAFSLAAQRVGYV 214 (335)
T ss_dssp TTHHHHCC--CCGGGGG-TCSSEEEEEESTTTTTCGGGCCEEE
T ss_pred cchhhcch--hHHHHhh-hCCCEEEEecchhhcCCcccCeEEE
Confidence 99864311 1111111 112467888999998744 335665
No 237
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=98.85 E-value=5e-08 Score=105.14 Aligned_cols=217 Identities=8% Similarity=-0.015 Sum_probs=138.8
Q ss_pred eeeeHHHHH---hhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----C
Q psy13453 20 LIYESFKAT---HSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----N 91 (764)
Q Consensus 20 ~~YSv~KAa---~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~ 91 (764)
.|.|+.+++ ...|... +.||+++++.+|+++|+++|++. +-+++.+.++.++|.+.|++++.+ +
T Consensus 98 ~~~~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~~~~i~~l~~~~~ 169 (384)
T 1eg5_A 98 EHKAVLETMKYLSMKGFKV---KYVPVDSRGVVKLEELEKLVDED-----TFLVSIMAANNEVGTIQPVEDVTRIVKKKN 169 (384)
T ss_dssp SCHHHHHHHHHHHHTTCEE---EECCBCTTSCBCHHHHHHHCCTT-----EEEEEEESBCTTTCBBCCHHHHHHHHHHHC
T ss_pred CchHHHHHHHHHHhcCCEE---EEEccCCCCccCHHHHHHHhCCC-----CeEEEEECCCCCcccccCHHHHHHHHHhcC
Confidence 466666655 6677765 89999989999999999998642 224456789999999999999876 7
Q ss_pred --CCceecccccc--c------c----------------c-eeeeecCCCccccccccccccCCc-----ccCCCC-ccc
Q psy13453 92 --GPLKVGGVLRR--V------Y----------------S-SCLVPRGQKSLRTTVLFHFLFQHW-----QIPLGR-RFR 138 (764)
Q Consensus 92 --~wlHVDa~l~~--~------y----------------~-s~ll~rd~~~l~~~~s~~~d~~d~-----tle~SR-r~~ 138 (764)
+|+++|++... . + + ++++.++.-.+... +..+ ...++- ...
T Consensus 170 ~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~G~G~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 243 (384)
T 1eg5_A 170 KETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGVPIRPL------IHGGGQERGLRSGTQNVPG 243 (384)
T ss_dssp TTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGGTSCTTCEEEEECTTSCCCCS------BCSSCTTTTTBCSCCCHHH
T ss_pred CceEEEEEhhhhcCCcccCchhcCCCEEEecHHHhcCCCceEEEEEcCCCccccc------cccCcccccccCCCCChHH
Confidence 99999996310 0 0 0 22222221000000 0000 011111 111
Q ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC---CceeEEEEeeccccccccccccCccCCccHH
Q psy13453 139 ALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP---SMGLVCFRLKVRFWDKLDNLFGTISFGDNDL 215 (764)
Q Consensus 139 ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P---~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~ 215 (764)
...++++++. +.+++.++.++..++++++.+.|++ ++++++.++ ..+.+.|++. +.+
T Consensus 244 ~~a~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~----------------~~~-- 303 (384)
T 1eg5_A 244 IVGAARAMEI-AVEELSEAAKHMEKLRSKLVSGLMN-LGAHIITPLEISLPNTLSVSFP----------------NIR-- 303 (384)
T ss_dssp HHHHHHHHHH-HHHTHHHHHHHHHHHHHHHHHHHHT-TTCEECSCTTSBCTTEEEEECT----------------TCC--
T ss_pred HHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHhCC-CCeEEeCCcccCCCCEEEEEeC----------------CCC--
Confidence 2234555555 3567889999999999999999998 799987764 2356777653 111
Q ss_pred HHHHHHHHHhcCcEEEEecee-------------------CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 216 NKAVYDRIIARKVIYIVKGSF-------------------QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 216 n~~L~~~L~~~G~~~vs~t~l-------------------~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
..++.+.|.+.|..+...... .+..++|+++ .+.+++++++.+++.|+++.+++.
T Consensus 304 ~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~-~~~~~~~~i~~~~~~l~~~~~~~~ 377 (384)
T 1eg5_A 304 GSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISL-CKYNTEEEVDYFLKKIEEILSFLD 377 (384)
T ss_dssp HHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEEC-CTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEEC-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 246778888888754322111 0146899974 456789999999999999877653
No 238
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=98.84 E-value=7.8e-08 Score=105.63 Aligned_cols=218 Identities=8% Similarity=-0.005 Sum_probs=139.5
Q ss_pred eeeeHHHHHhhc---CCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----C
Q psy13453 20 LIYESFKATHSL---SGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----N 91 (764)
Q Consensus 20 ~~YSv~KAa~~L---Gl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~ 91 (764)
.|.|+..++..+ |... +.||+++++.+|+++|+++|+++ +-+++.+.++.++|.+.|++++++ +
T Consensus 122 ~~~~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~ 193 (423)
T 3lvm_A 122 EHKAVLDTCRQLEREGFEV---TYLAPQRNGIIDLKELEAAMRDD-----TILVSIMHVNNEIGVVQDIAAIGEMCRARG 193 (423)
T ss_dssp SCHHHHHHHHHHHHTTCEE---EEECCCTTSCCCHHHHHHHCCTT-----EEEEECCSBCTTTCBBCCHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHcCCEE---EEeccCCCCccCHHHHHHhcCCC-----cEEEEEeCCCCCCccccCHHHHHHHHHHcC
Confidence 567888888766 7766 99999999999999999999753 123367778899999999999876 8
Q ss_pred CCceeccccccc--------c-----------------ceeeeecCCCccccccccccccCCc----cc-CCCCccc-HH
Q psy13453 92 GPLKVGGVLRRV--------Y-----------------SSCLVPRGQKSLRTTVLFHFLFQHW----QI-PLGRRFR-AL 140 (764)
Q Consensus 92 ~wlHVDa~l~~~--------y-----------------~s~ll~rd~~~l~~~~s~~~d~~d~----tl-e~SRr~~-AL 140 (764)
+|+++|++.... + .++++.++... .. +. .-...+ .. .++-... ..
T Consensus 194 ~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~~~~-~~-~~--~~~~~~~~~~~~~~~~~~~~~~~ 269 (423)
T 3lvm_A 194 IIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPR-VR-IE--AQMHGGGHERGMRSGTLPVHQIV 269 (423)
T ss_dssp CEEEEECTTTTTTSCCCTTTSCCSEEEEESTTTTSCSSCEEEEECBTTB-CC-CC--CSSCSSCTTTTTCCSCCCHHHHH
T ss_pred CEEEEEhhhhcCCCCcChhhcCCCEEEechHHhcCCCCeEEEEEecccc-CC-CC--ccccCCcccccccCCCCCHHHHH
Confidence 999999963111 0 01222221100 00 00 000000 00 1111111 22
Q ss_pred HHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC---ceeEEEEeeccccccccccccCccCCccHHHH
Q psy13453 141 KLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS---MGLVCFRLKVRFWDKLDNLFGTISFGDNDLNK 217 (764)
Q Consensus 141 klWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~---l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~ 217 (764)
.+.+++..+.. .+.++.++..++++++.+.|++.|+++++.++. .++++|++.. .+ ..
T Consensus 270 a~~~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~--~~ 330 (423)
T 3lvm_A 270 GMGEAYRIAKE-EMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNY----------------VE--GE 330 (423)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEETT----------------SC--HH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeCC----------------CC--HH
Confidence 33455554433 388999999999999999999999999987765 4678887621 11 12
Q ss_pred HHHHHHHhcCcEEEEece-----------------eC---CeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 218 AVYDRIIARKVIYIVKGS-----------------FQ---DRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 218 ~L~~~L~~~G~~~vs~t~-----------------l~---g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
++.+.|.+ ..+.... +. ...++|+++. ..+++++++.+++.|+++.+++.+
T Consensus 331 ~l~~~l~~---i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~-~~~t~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 331 SLIMALKD---LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLG-RFTTEEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp HHHHHTTT---EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhh---heeccCccccCCCccccHHHHHhCCCccccCceEEEECC-CCCCHHHHHHHHHHHHHHHHHhhc
Confidence 45555544 2222110 00 1468999765 567899999999999999888754
No 239
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=98.84 E-value=6.2e-09 Score=114.25 Aligned_cols=197 Identities=13% Similarity=0.049 Sum_probs=120.6
Q ss_pred HHHHHHHHHhhccc-----CccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHH
Q psy13453 537 SIVGDMLSGAFGLI-----GFSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRK 611 (764)
Q Consensus 537 ~~lad~l~~~lN~n-----~~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~ 611 (764)
..+.+.+...+.++ ...|.......++.+.+.+|+.+..|++-+ ....+||+|||+++..++.+....
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~-------~~~i~~t~G~t~al~~~~~~l~~~ 121 (417)
T 3g7q_A 49 DYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIE-------PQNIALTNGSQSAFFYLFNLFAGR 121 (417)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCC-------GGGEEEESCHHHHHHHHHHHHSBC
T ss_pred HHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCC-------cccEEEeCCcHHHHHHHHHHHcCC
Confidence 44555555544322 124555556678888899999888776532 246899999999998887765211
Q ss_pred HhhhhccCCCCCccccccCceEEEec-CCcchhHHHHHHhC----C--CceEEEecCC-CCcccHHHHHHHHHHhhhcCC
Q psy13453 612 MINHWQSKNPSLTENDIRNKLVAYTS-DQSNSSVEKSAIIG----D--VPVRQLRSDD-NGVLRGDALLTAVKEDLAKGL 683 (764)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~vi~~S-~~aH~Sv~kAa~~l----G--l~v~~Vp~d~-~g~md~~~Le~~I~~~~~~G~ 683 (764)
. .. ..+..|+++ .-+|.....++... + ..+..++.+. ++.+|+++|+ +.+
T Consensus 122 ---g--d~---------~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~------ 179 (417)
T 3g7q_A 122 ---R--AD---------GSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--IGE------ 179 (417)
T ss_dssp ------------------CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--CCT------
T ss_pred ---C--cc---------CCcceEEEeCCCccccchhhccchhhhccccCcccccCCcccccccCHHHhc--ccc------
Confidence 0 00 001145665 55555555444322 2 2344444432 4578999987 322
Q ss_pred CceEEEEeeccCCcccccc---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCc
Q psy13453 684 IPCCLIATLGTTGTCAFDN---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDC 760 (764)
Q Consensus 684 ~p~~VvataGTT~~GaiDp---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~ 760 (764)
.+.+|+.+..++.+|.+-+ +++|+++|++||+++++|.+|+...... .+..........+-+..+++|++.....+
T Consensus 180 ~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~G~r~ 258 (417)
T 3g7q_A 180 ETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGI-IFSEARPLWNPNIILCMSLSKLGLPGSRC 258 (417)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCCCCCCTTEEEEEESGGGTCTTSCC
T ss_pred CceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccc-cccccccCCCCCEEEEEechhccCCCcce
Confidence 2557888888999999977 8999999999999999999998532111 01111111223467788999976555556
Q ss_pred eee
Q psy13453 761 SAM 763 (764)
Q Consensus 761 g~l 763 (764)
|++
T Consensus 259 G~~ 261 (417)
T 3g7q_A 259 GII 261 (417)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 240
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=98.83 E-value=5.4e-08 Score=108.78 Aligned_cols=166 Identities=13% Similarity=0.008 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 560 CTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 560 ~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
...++.++.+|++++++ .. ...+||+|||+||..|+.+||... + ++-+|+....
T Consensus 95 ~~~~~~~la~~l~~~~~-~~---------~~v~~~~gg~eA~~~al~~ar~~~-~---------------~~~vi~~~~~ 148 (453)
T 2cy8_A 95 SHPLEVRWAERIVAAFP-SI---------RKLRFTGSGTETTLLALRVARAFT-G---------------RRMILRFEGH 148 (453)
T ss_dssp SCHHHHHHHHHHHHHCT-TC---------SEEEEESCHHHHHHHHHHHHHHHH-C---------------CCEEEEECC-
T ss_pred CCHHHHHHHHHHHhhCC-CC---------CEEEEeCCHHHHHHHHHHHHHHhh-C---------------CCEEEEEcCC
Confidence 45788999999999985 22 257899999999999999987532 1 1224444444
Q ss_pred cchhHHHHHH----------hCCC------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc-
Q psy13453 640 SNSSVEKSAI----------IGDV------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN- 702 (764)
Q Consensus 640 aH~Sv~kAa~----------~lGl------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp- 702 (764)
-|....-+.. ..|+ .+..+|. .|+++|+++|++.. ..+.+|+++--.+.+|.+-|
T Consensus 149 yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~---~~~~~vi~ep~~~~tG~~~~~ 220 (453)
T 2cy8_A 149 YHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-----DDIEGMREVFANHG---SDIAAFIAEPVGSHFGVTPVS 220 (453)
T ss_dssp ---------------------------CGGGEEEECT-----TCHHHHHHHHHHHG---GGEEEEEECSSEHHHHTEECC
T ss_pred cCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-----CCHHHHHHHHHhcC---CCEEEEEECCCCCCCCCcCCC
Confidence 5532221111 1233 2344443 38999999997531 12446665554455898776
Q ss_pred ---HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 703 ---LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 703 ---l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+++|+++|++||++|++|.+|++. ...+.+.....|+ ..|.++ +.|+++..+..|++
T Consensus 221 ~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~s--~sK~l~~G~~~G~v 280 (453)
T 2cy8_A 221 DSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDV-QPDLTC--LAKASAGGLPGGIL 280 (453)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTC-CCSEEE--EEGGGGTTSSCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCC-CCcEEE--EChhhhCCcceEEE
Confidence 999999999999999999999965 3222111112233 357654 55999876667765
No 241
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=98.83 E-value=5.1e-08 Score=104.58 Aligned_cols=153 Identities=8% Similarity=-0.071 Sum_probs=112.5
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVE 645 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~ 645 (764)
++.+++++++|.+++ ..+||+|+|+++..++.+.. . ..|+++.-+|.+..
T Consensus 54 ~lr~~la~~~~~~~~---------~i~~t~g~~~al~~~~~~l~-----g----------------d~Vi~~~p~~~~~~ 103 (350)
T 3fkd_A 54 TLRQMLAKRNSVDNN---------AILVTNGPTAAFYQIAQAFR-----G----------------SRSLIAIPSFAEYE 103 (350)
T ss_dssp HHHHHHHHHTTCCGG---------GEEEESHHHHHHHHHHHHTT-----T----------------CEEEEEESCCHHHH
T ss_pred HHHHHHHHHhCcCHH---------HEEEcCCHHHHHHHHHHHHC-----C----------------CEEEEeCCCcHHHH
Confidence 567788888988653 68999999999888776543 1 14678889999999
Q ss_pred HHHHhCCCceEEEec-CCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcC-CEEEEeccc
Q psy13453 646 KSAIIGDVPVRQLRS-DDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYN-IWLHVDAAY 723 (764)
Q Consensus 646 kAa~~lGl~v~~Vp~-d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~g-lwLHVDaA~ 723 (764)
.++...|.+++.+|+ ++.+.+++ + .+-+|+.+..++.+|.+-|+++|.++|+.++ .++++|.||
T Consensus 104 ~~~~~~g~~~~~v~~~~~~~~~~~--------~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~ 169 (350)
T 3fkd_A 104 DACRMYEHEVCFYPSNEDIGEADF--------S------NMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSY 169 (350)
T ss_dssp HHHHHTTCEEEEEETTSCGGGSCC--------T------TCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTT
T ss_pred HHHHHcCCeEEEEecCCccccCcc--------C------CCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECch
Confidence 999999999999999 76556665 1 2447777889999999999999999998876 799999999
Q ss_pred cccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 724 AGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 724 Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+.+..-.+.....+.. ...+-+..+++|+++.| ..+|.+
T Consensus 170 ~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~~ 209 (350)
T 3fkd_A 170 VSFTTEEVIRPADIKG-RKNLVMVYSFSHAYGIPGLRIGYI 209 (350)
T ss_dssp TTSCSSCCCCGGGGTT-CSSEEEEEESHHHHSCGGGCCEEE
T ss_pred hhhccCcchhhHHhhc-CCCEEEEecCchhccCcchheEeE
Confidence 7643221111112211 12346778999998744 556654
No 242
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=98.82 E-value=8.8e-08 Score=107.01 Aligned_cols=178 Identities=12% Similarity=0.022 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 560 CTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 560 ~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
......++.+|++++++.+. . .+||+|||+||..|+.+++...... +.. .++-+++....
T Consensus 89 ~~~~~~~la~~l~~~~~~~~---------~-v~~~~ggseA~~~al~~~~~~~~~~-g~~---------~~~~vi~~~~~ 148 (452)
T 3n5m_A 89 SHEPAIKLAEKLNEWLGGEY---------V-IFFSNSGSEANETAFKIARQYYAQK-GEP---------HRYKFMSRYRG 148 (452)
T ss_dssp EEHHHHHHHHHHHHHHTSCE---------E-EEEESSHHHHHHHHHHHHHHHHHTT-TCT---------TCCEEEEETTC
T ss_pred CCHHHHHHHHHHHHhCCCCc---------e-EEEeCchHHHHHHHHHHHHHHHHhc-CCC---------CCCEEEEECCC
Confidence 34566778889999987654 2 7899999999999999998653221 000 11345666667
Q ss_pred cchhHHHHHHhCCC------------ceEEEecCCCC------------cccHHHHHHHHHHhhhcCCCceEEEEeec-c
Q psy13453 640 SNSSVEKSAIIGDV------------PVRQLRSDDNG------------VLRGDALLTAVKEDLAKGLIPCCLIATLG-T 694 (764)
Q Consensus 640 aH~Sv~kAa~~lGl------------~v~~Vp~d~~g------------~md~~~Le~~I~~~~~~G~~p~~VvataG-T 694 (764)
-|-...-+....|. .+..++..... ..++++|+++|++. .+..+.+|++.-. .
T Consensus 149 yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~~~vi~ep~~~ 226 (452)
T 3n5m_A 149 YHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWE--LSETIAAFIMEPIIT 226 (452)
T ss_dssp CCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHH--CGGGEEEEEECSSBT
T ss_pred cCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhc--CCCCEEEEEEccccC
Confidence 77555444444332 24555542211 12289999999732 1123445665555 5
Q ss_pred CCcccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 695 TGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 695 T~~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+ +|.+-| +++|+++|++||++|++|-+|.++......+.....|+ ..|.++++ |.++.. +..|++
T Consensus 227 n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~t~s--K~l~~G~~~ig~~ 296 (452)
T 3n5m_A 227 G-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDV-KPDIITMA--KGITSAYLPLSAT 296 (452)
T ss_dssp T-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEEC--GGGGTTSSCCEEE
T ss_pred C-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCC-CCCEEeec--ccccCCCcceEEE
Confidence 7 898776 99999999999999999999887432211111222344 35777765 776644 445543
No 243
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=98.82 E-value=3e-08 Score=110.44 Aligned_cols=172 Identities=13% Similarity=-0.001 Sum_probs=114.4
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCce
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKL 632 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~ 632 (764)
.|...+...++++.+.+|+. .|++.+ ....+||+|+++++..+ .+. .. ++.
T Consensus 106 ~y~~~~g~~~lr~~ia~~~~--~g~~~~-------~~~i~~t~G~~~al~~~-~~l----~~---------------~gd 156 (449)
T 3qgu_A 106 GYGAEQGQGALREAVASTFY--GHAGRA-------ADEIFISDGSKCDIARI-QMM----FG---------------SKP 156 (449)
T ss_dssp CSTTTTCCHHHHHHHHHHHH--TTTTCC-------GGGEEEESCHHHHHHHH-HHH----HC---------------SSS
T ss_pred CCCCCCCcHHHHHHHHHHHH--cCCCCC-------HHHEEEccCHHHHHHHH-HHH----hC---------------CCC
Confidence 34333456778888888877 555321 24689999999987654 211 11 112
Q ss_pred EEEecCCcchhHHHHHHhCCCc----------eEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc-
Q psy13453 633 VAYTSDQSNSSVEKSAIIGDVP----------VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD- 701 (764)
Q Consensus 633 vi~~S~~aH~Sv~kAa~~lGl~----------v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD- 701 (764)
.|++.+-+|.+...++...|.. ++.+|.++++.++++ +++. ..+-+|+++..++.+|.+-
T Consensus 157 ~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~v~l~~p~NPtG~~~~ 227 (449)
T 3qgu_A 157 TVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPD-LSKA--------KRTDIIFFCSPNNPTGAAAT 227 (449)
T ss_dssp CEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCC-GGGC--------CCCSEEEEESSCTTTCCCCC
T ss_pred EEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCC-hhHc--------CCCCEEEEeCCCCCCCCcCC
Confidence 4778889999999999999988 999999864333322 1110 2244666678889999884
Q ss_pred --cHHHHHHHHHhcCCEEEEeccccccccccchhhh---hhcCCCcccEEEEcCCccCC-CCcCceee
Q psy13453 702 --NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAH---LKRGLEYVDSFDFNTHKWLL-VNFDCSAM 763 (764)
Q Consensus 702 --pl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~---~l~gie~aDSit~d~HK~l~-~P~~~g~l 763 (764)
++++|+++|++||+++++|.+|+++..-- .... .+.+....+-+..+++|+++ ....+|++
T Consensus 228 ~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~ 294 (449)
T 3qgu_A 228 RAQLTELVNFARKNGSILVYDAAYALYISNP-DCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWT 294 (449)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTGGGCCCT-TSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEE
T ss_pred HHHHHHHHHHHHHCCcEEEEEcchHhhhcCC-CCCCCHhhccCCCCcEEEEecchhhcCCccceeEEE
Confidence 58889999999999999999999854321 1111 11222234678899999997 44556665
No 244
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=98.81 E-value=9e-08 Score=107.00 Aligned_cols=178 Identities=10% Similarity=-0.013 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
.....++.+|++++++... ...+||+|||+||..|+++++...... +.. .++-+|+....-
T Consensus 86 ~~~~~~la~~l~~~~~~~~---------~~v~~~~sGseA~~~al~~~~~~~~~~-G~~---------~~~~vi~~~~~y 146 (448)
T 3dod_A 86 NVPATQLAETLIDISPKKL---------TRVFYSDSGAEAMEIALKMAFQYWKNI-GKP---------EKQKFIAMKNGY 146 (448)
T ss_dssp EHHHHHHHHHHHHHSCTTE---------EEEEEESSHHHHHHHHHHHHHHHHHHT-TCT---------TCCEEEEEC---
T ss_pred CHHHHHHHHHHHHhCCCCC---------CEEEEeCchHHHHHHHHHHHHHHHHhh-CCC---------CCCEEEEECCCC
Confidence 3455677789999986543 257899999999999999998753221 100 012345555555
Q ss_pred chhHHHHHHhCC------------CceEEEecCCCCcc-----------cHHHHHHHHHHhhhcCCCceEEEEeecc-CC
Q psy13453 641 NSSVEKSAIIGD------------VPVRQLRSDDNGVL-----------RGDALLTAVKEDLAKGLIPCCLIATLGT-TG 696 (764)
Q Consensus 641 H~Sv~kAa~~lG------------l~v~~Vp~d~~g~m-----------d~~~Le~~I~~~~~~G~~p~~VvataGT-T~ 696 (764)
|-+..-+....| ..+..+|....++. |+++|+++|++.. ..+.+|++.--. +.
T Consensus 147 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~a~vi~ep~~~~~ 223 (448)
T 3dod_A 147 HGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHH---EEIAALSIESMVQGA 223 (448)
T ss_dssp --------------------------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHG---GGEEEEEEESSEEST
T ss_pred CCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCC---CCEEEEEEeCcccCC
Confidence 654443333322 13556666554443 5899999997321 124455555444 55
Q ss_pred cccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc-Cceee
Q psy13453 697 TCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF-DCSAM 763 (764)
Q Consensus 697 ~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~-~~g~l 763 (764)
.|.+-+ +++|+++|++||++|++|-+|.+.......+.....|+ ..|.++++ |.++..+ ..|++
T Consensus 224 ~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~-~~di~t~s--K~l~~G~~~ig~v 292 (448)
T 3dod_A 224 SGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENV-QPDLMAAG--KGITGGYLPIAVT 292 (448)
T ss_dssp TTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTSSCCEEE
T ss_pred CCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCC-CCCEEEec--ccccCCcCceEEE
Confidence 676655 99999999999999999999886432211111222344 35777765 9887553 55544
No 245
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=98.81 E-value=3.2e-08 Score=107.61 Aligned_cols=221 Identities=11% Similarity=0.041 Sum_probs=144.5
Q ss_pred HHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceeccc
Q psy13453 25 FKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGGV 99 (764)
Q Consensus 25 ~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa~ 99 (764)
.++++..|... +.||++.++.+|+++|+++|++. ++-+++.+.+++++|.+.|++++.+ ++++++|++
T Consensus 109 ~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~l~~~----~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea 181 (396)
T 2ch1_A 109 VEMSERYGADV---RTIEGPPDRPFSLETLARAIELH----QPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAV 181 (396)
T ss_dssp HHHHHHTTCEE---EEEECCTTSCCCHHHHHHHHHHH----CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECT
T ss_pred HHHHHHcCCce---EEecCCCCCCCCHHHHHHHHHhC----CCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEcc
Confidence 46888999876 99999998999999999999863 1235556788899999999999876 889999996
Q ss_pred cccc--------cc------------------eeeeecCCCcccccccc-----ccccCC-------cc-------cCCC
Q psy13453 100 LRRV--------YS------------------SCLVPRGQKSLRTTVLF-----HFLFQH-------WQ-------IPLG 134 (764)
Q Consensus 100 l~~~--------y~------------------s~ll~rd~~~l~~~~s~-----~~d~~d-------~t-------le~S 134 (764)
.... ++ ++++.++ +.+. .+.. .+-+.+ |. ..++
T Consensus 182 ~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (396)
T 2ch1_A 182 ASLCGVPFYMDKWEIDAVYTGAQKVLGAPPGITPISISP-KALD-VIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHT 259 (396)
T ss_dssp TTBTTBCCCTTTTTCCEEECCCC-CCCCCSSCEEEEECH-HHHH-HHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCC
T ss_pred ccccCCccchhhcCcCEEEEcCCccccCCCCeEEEEECH-HHHH-hhhhccCcccceEechHHHHHhhhhhcccCCCCCC
Confidence 4200 00 1121111 0000 0000 000000 10 1112
Q ss_pred Ccc-cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC----ceeEEEEeeccccccccccccCcc
Q psy13453 135 RRF-RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS----MGLVCFRLKVRFWDKLDNLFGTIS 209 (764)
Q Consensus 135 Rr~-~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~----l~iV~Fry~P~~~~~~~~~~~~~~ 209 (764)
-.. ....+.+++..+..+++.++.++..+.++++.+.|++. +++++.+.. -.+++|++. .
T Consensus 260 ~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-~------------- 324 (396)
T 2ch1_A 260 VASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLDIFVKDPRHRLPTVTGIMIP-K------------- 324 (396)
T ss_dssp CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCBSSCSGGGBCTTEEEEECC-T-------------
T ss_pred CcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCeeccCCccccCCceEEEEcC-C-------------
Confidence 211 22355667777777889999999999999999999988 888765432 136777652 1
Q ss_pred CCccHHHHHHHHHHHhc-CcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 210 FGDNDLNKAVYDRIIAR-KVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 210 ~~~d~~n~~L~~~L~~~-G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
+.+ ..++.++|.++ |.............++|++++...+++++++.+++.|+++.+++..
T Consensus 325 -~~~--~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~~ 385 (396)
T 2ch1_A 325 -GVD--WWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHP 385 (396)
T ss_dssp -TCC--HHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCT
T ss_pred -CCC--HHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhCc
Confidence 111 24677788765 8754322222234689998877788999999999999999877643
No 246
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=98.80 E-value=5.2e-08 Score=107.89 Aligned_cols=172 Identities=15% Similarity=0.057 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.+.+++++|.+. ...+||+|||+||..++.+++... . ++-+++.+..-|
T Consensus 85 ~~~~~l~~~la~~~~~~~---------~~v~~~~gg~ea~~~a~~~~~~~~--~--------------~~~vi~~~~~yh 139 (433)
T 1zod_A 85 RPVVDLATRLANITPPGL---------DRALLLSTGAESNEAAIRMAKLVT--G--------------KYEIVGFAQSWH 139 (433)
T ss_dssp HHHHHHHHHHHHHSCTTC---------CEEEEESCHHHHHHHHHHHHHHHH--T--------------CCEEEEETTCCC
T ss_pred HHHHHHHHHHHHhCCCCc---------CEEEEeCchHHHHHHHHHHHHHhh--C--------------CCeEEEECCCcC
Confidence 344566677888887644 257899999999999999876421 1 022555666777
Q ss_pred hhHHHHHHhCC-----------CceEEEecCCC------------CcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcc
Q psy13453 642 SSVEKSAIIGD-----------VPVRQLRSDDN------------GVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTC 698 (764)
Q Consensus 642 ~Sv~kAa~~lG-----------l~v~~Vp~d~~------------g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~G 698 (764)
.+..-+....+ ..++.+++... +.+|+++|+++|++. .+..+.+|++.--++.+|
T Consensus 140 g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G 217 (433)
T 1zod_A 140 GMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQ--SSGNLAAFIAEPILSSGG 217 (433)
T ss_dssp CSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHH--CCSCEEEEEECSEETTTT
T ss_pred CCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhc--CCCCeEEEEEccccCCCC
Confidence 66655554321 25666665321 246899999999753 112344555544345578
Q ss_pred cccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 699 AFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 699 aiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
.+-+ +++|+++|++||++|++|.+|++.....+.+.....++ ..|.++++ |.++..+.+|++
T Consensus 218 ~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~-~~di~s~s--K~~~~G~~ig~~ 283 (433)
T 1zod_A 218 IIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGV-TPDILTLS--KTLGAGLPLAAI 283 (433)
T ss_dssp CEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--HHHHTTSSCEEE
T ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCC-CCCEEEec--ccccCCCCeeEE
Confidence 7655 99999999999999999999986432211111111233 34666554 988766667765
No 247
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=98.80 E-value=3.1e-08 Score=109.66 Aligned_cols=173 Identities=14% Similarity=0.043 Sum_probs=112.7
Q ss_pred cccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCce
Q psy13453 553 SWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKL 632 (764)
Q Consensus 553 ~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~ 632 (764)
.|.......++++.+.+|+.+-++.++ ...+||+|+++++.. +.. ... ++.
T Consensus 93 ~y~~~~g~~~l~~~ia~~~~~~~~~~~---------~~i~~t~G~~~al~~-l~~----l~~---------------~gd 143 (432)
T 3ei9_A 93 GYGAEQGAKPLRAAIAKTFYGGLGIGD---------DDVFVSDGAKCDISR-LQV----MFG---------------SNV 143 (432)
T ss_dssp CCCCTTCCHHHHHHHHHHHHTTTTCCG---------GGEEEESCHHHHHHH-HHH----HHC---------------TTC
T ss_pred CCCCCCCCHHHHHHHHHHHHccCCCCc---------ceEEECCChHHHHHH-HHH----HcC---------------CCC
Confidence 344445568899999999886445444 368999999998654 221 111 112
Q ss_pred EEEecCCcchhHHHHHHhCC------------CceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc
Q psy13453 633 VAYTSDQSNSSVEKSAIIGD------------VPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF 700 (764)
Q Consensus 633 vi~~S~~aH~Sv~kAa~~lG------------l~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai 700 (764)
.|++++-+|.++..++...| .+++.+|++.++.++.+ |++ ...+-+|+.+..++.+|.+
T Consensus 144 ~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~--------~~~~~~v~l~~p~NPtG~~ 214 (432)
T 3ei9_A 144 TIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPD-LST--------VGRTDIIFFCSPNNPTGAA 214 (432)
T ss_dssp CEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCC-GGG--------CCCCSEEEEESSCTTTCCC
T ss_pred EEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCC-hhh--------CCCCCEEEEeCCCCCCCCC
Confidence 47788999999999888877 36888998754333222 221 1124466667888999987
Q ss_pred ---ccHHHHHHHHHhcCCEEEEeccccccccccchh-hhhhcCCCcccEEEEcCCccCC-CCcCceee
Q psy13453 701 ---DNLEELGPICQEYNIWLHVDAAYAGSALLLPEY-AHLKRGLEYVDSFDFNTHKWLL-VNFDCSAM 763 (764)
Q Consensus 701 ---Dpl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~-r~~l~gie~aDSit~d~HK~l~-~P~~~g~l 763 (764)
+++++|+++|++||+|+++|.+|+.+..--... -..+.+....+-+..+++|.++ ....+|++
T Consensus 215 ~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~ 282 (432)
T 3ei9_A 215 ATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWT 282 (432)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEE
T ss_pred CCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEE
Confidence 467788888999999999999999754321100 0111222234677889999987 33445654
No 248
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=98.79 E-value=6.2e-08 Score=107.53 Aligned_cols=165 Identities=18% Similarity=0.037 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
.....++.++++++++ .. ...+||+|||+||..|+.+||... ++ +-+|+....-
T Consensus 95 ~~~~~~l~~~la~~~~-~~---------~~v~~~~sgseA~~~al~~ar~~~-~~---------------~~vi~~~~~y 148 (434)
T 2epj_A 95 GEAEVLLAEKILGYVK-RG---------GMIRFVNSGTEATMTAIRLARGYT-GR---------------DLILKFDGCY 148 (434)
T ss_dssp CHHHHHHHHHHHHHHC-TT---------CEEEEESSHHHHHHHHHHHHHHHH-CC---------------CEEEEEETCC
T ss_pred CHHHHHHHHHHHHhCC-CC---------CEEEEeCCHHHHHHHHHHHHHHhh-CC---------------CeEEEEcCCc
Confidence 3455667778888874 12 247899999999999999987532 11 1244444444
Q ss_pred chhHHHHH-------------HhCCC------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc
Q psy13453 641 NSSVEKSA-------------IIGDV------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD 701 (764)
Q Consensus 641 H~Sv~kAa-------------~~lGl------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD 701 (764)
|....-+. ...|+ .+..+|. .|+++|+++|++.. ..+.+|+++--.+.+|.+-
T Consensus 149 hg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~ 220 (434)
T 2epj_A 149 HGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-----NDVEALERVFAEYG---DRIAGVIVEPVIANAGVIP 220 (434)
T ss_dssp CCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-----TCHHHHHHHHHHHG---GGEEEEEECSSBCSSSCBC
T ss_pred CCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-----CCHHHHHHHHHhCC---CCEEEEEEeCCcCCCCccC
Confidence 53222111 01243 3555554 28999999997531 1355666665556689887
Q ss_pred c----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 702 N----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 702 p----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
| +++|+++|++||++|++|.+|+++ ...+.+.....|+ ..|-+++ +|+++..+..|++
T Consensus 221 ~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~s~--sK~l~~G~~~G~v 282 (434)
T 2epj_A 221 PRREFLAALQRLSRESGALLILDEVVTGF-RLGLEGAQGYFNI-EGDIIVL--GKIIGGGFPVGAV 282 (434)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTC-CCSEEEE--EGGGGTTSSCEEE
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcchhhHHhCC-CCCeeee--cchhcCCcceeee
Confidence 7 999999999999999999999965 3222122112243 3576654 5998874456654
No 249
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=98.79 E-value=3.3e-08 Score=109.49 Aligned_cols=125 Identities=13% Similarity=-0.082 Sum_probs=88.1
Q ss_pred EEEecCCcchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEE-EeeccCCccccccHH---HHHH
Q psy13453 633 VAYTSDQSNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLI-ATLGTTGTCAFDNLE---ELGP 708 (764)
Q Consensus 633 vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~Vv-ataGTT~~GaiDpl~---eIa~ 708 (764)
.|++.+-+|.....+++..|.+++.||.+++| +|+++|++++++. .+-+|+ ....++.+|.+-+.+ +|++
T Consensus 133 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~-----~~~~v~~~~~~~NPtG~~~~~~~l~~l~~ 206 (422)
T 3d6k_A 133 KWLCPVPGYDRHFTITEHFGFEMINVPMTDEG-PDMGVVRELVKDP-----QVKGMWTVPVFGNPTGVTFSEQTCRELAE 206 (422)
T ss_dssp EEEEEESCCHHHHHHHHHHTCEEEEEEEETTE-ECHHHHHHHHTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred EEEEeCCccHHHHHHHHHcCCEEEecCCCCCC-CCHHHHHHHHhcC-----CCeEEEEcCCCCCCCCCCCCHHHHHHHHH
Confidence 47778888999999999999999999998776 9999999998541 133544 566788899997766 7888
Q ss_pred HHH-hcCCEEEEeccccc-cccccc----hhhhhh--cCCCcccEEEEcCCccCCCCcCceee
Q psy13453 709 ICQ-EYNIWLHVDAAYAG-SALLLP----EYAHLK--RGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 709 i~~-~~glwLHVDaA~Gg-~~l~~~----~~r~~l--~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+|+ +||+++++|.+|+. .+.... ...... .+...-+-+..+++|+++.-+.+|.+
T Consensus 207 ~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~ 269 (422)
T 3d6k_A 207 MSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFF 269 (422)
T ss_dssp CCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEE
T ss_pred HHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEE
Confidence 888 99999999999974 221111 111110 11222367788999984432446665
No 250
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=98.79 E-value=4e-08 Score=107.77 Aligned_cols=165 Identities=13% Similarity=-0.034 Sum_probs=105.1
Q ss_pred chHHHHHHHHHHHHHHHcC-CCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEe
Q psy13453 558 PACTELEVLVMNWLGKALG-LPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYT 636 (764)
Q Consensus 558 p~~t~lE~~v~~~la~llG-~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~ 636 (764)
+...++++.+.+++. .| .++ ...++|+|+|+++..++.+ +.. +..|++
T Consensus 75 ~g~~~lr~~la~~l~--~g~~~~---------~~v~~~~G~~~al~~~~~~-----~~~---------------gd~Vl~ 123 (400)
T 3asa_A 75 FGLPALRQKLSEDFY--RGFVDA---------KEIFISDGAKVDLFRLLSF-----FGP---------------NQTVAI 123 (400)
T ss_dssp TCCHHHHHHHHHTTS--TTSSCG---------GGEEEESCHHHHHHHHHHH-----HCS---------------SCEEEE
T ss_pred CCCHHHHHHHHHHHH--cCCCCH---------HHEEEccChHHHHHHHHHH-----cCC---------------CCEEEE
Confidence 344555555555432 46 333 3688999999987653321 111 124677
Q ss_pred cCCcchhHHHHHHhCCCc-eEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HHHHHHHHHh
Q psy13453 637 SDQSNSSVEKSAIIGDVP-VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LEELGPICQE 712 (764)
Q Consensus 637 S~~aH~Sv~kAa~~lGl~-v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~eIa~i~~~ 712 (764)
..-+|.+...++...|.. ++.+|.++++.++.+ +++. ..+-+|+.+..++.+|.+-| +++|+++|++
T Consensus 124 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-l~~~--------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~ 194 (400)
T 3asa_A 124 QDPSYPAYLDIARLTGAKEIIALPCLQENAFFPE-FPED--------THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIE 194 (400)
T ss_dssp EESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCC-CCTT--------CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHcCCcceEecccchhcCcccC-hhhc--------cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHH
Confidence 778898998899999998 999998754433321 2210 12446666788899999865 6678899999
Q ss_pred cCCEEEEeccccccccccchhhhhhcCCC---cccEEEEcCCccCCCC-cCceee
Q psy13453 713 YNIWLHVDAAYAGSALLLPEYAHLKRGLE---YVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 713 ~glwLHVDaA~Gg~~l~~~~~r~~l~gie---~aDSit~d~HK~l~~P-~~~g~l 763 (764)
||+++++|.+|+.+..- +.....+..+. ..+-+..+++|+++.| +.+|++
T Consensus 195 ~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~ 248 (400)
T 3asa_A 195 HEILILFDAAYSTFISD-PSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWT 248 (400)
T ss_dssp TTCEEEEECTTGGGCCC-TTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEE
T ss_pred cCCEEEEEchhhhhhcC-CCCCCchhhCCCCCCceEEEecchhhcCCcchheeEE
Confidence 99999999999964321 11111122222 1236688999998743 345654
No 251
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=98.78 E-value=5.5e-08 Score=103.97 Aligned_cols=220 Identities=9% Similarity=0.025 Sum_probs=140.2
Q ss_pred HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceecc
Q psy13453 24 SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGG 98 (764)
Q Consensus 24 v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa 98 (764)
+.+++...|+.. +.||+++++.+|+++|+++|+++. ++-+++.+.+++++|.+.|++++++ ++|+++|+
T Consensus 95 ~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~l~~~~---~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De 168 (366)
T 1m32_A 95 MVEMAGLMGIAH---HAYDCGEVARPDVQAIDAILNADP---TISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDA 168 (366)
T ss_dssp HHHHHHHHTCCE---EEEECCTTSCCCHHHHHHHHHHCT---TCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHhCCce---EEEeCCCCCCCCHHHHHHHHhcCC---CeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEC
Confidence 467888899876 999999989999999999998731 1224457778889999999999876 89999999
Q ss_pred ccccc---c------ceeeeecCCCccccc----cc-cc---cc-c----CCccc------------CCCC--ccc---H
Q psy13453 99 VLRRV---Y------SSCLVPRGQKSLRTT----VL-FH---FL-F----QHWQI------------PLGR--RFR---A 139 (764)
Q Consensus 99 ~l~~~---y------~s~ll~rd~~~l~~~----~s-~~---~d-~----~d~tl------------e~SR--r~~---A 139 (764)
+.... + ..+++..-.+.+..- +- .. .+ + ..+.. .+.| ... .
T Consensus 169 a~~~~~~~~~~~~~~~di~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (366)
T 1m32_A 169 MSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTV 248 (366)
T ss_dssp TTTTTTSCCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHH
T ss_pred CccccCcCccccccCccEEEecCcccccCCCceEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHH
Confidence 64210 0 011111111111000 00 00 00 0 00000 0221 112 2
Q ss_pred HHHHHHHHHccHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC--Cce-eEEEEeeccccccccccccCccCCccHH
Q psy13453 140 LKLWMTLRSYGLKG-LQAYLRKHISLAKKFADLVEQDDRFELVCPP--SMG-LVCFRLKVRFWDKLDNLFGTISFGDNDL 215 (764)
Q Consensus 140 LklWatL~~lG~eG-y~~~i~~~i~lA~~l~~~I~~~p~~ell~~P--~l~-iV~Fry~P~~~~~~~~~~~~~~~~~d~~ 215 (764)
..+.+++..+...| +.++.++..++++++.+.|++. +++++.++ ..+ ++.|++... . ..+
T Consensus 249 ~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~--~-----------~~~-- 312 (366)
T 1m32_A 249 LAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNTLLDDELHSPIITAFYSPED--P-----------QYR-- 312 (366)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCCC--T-----------TCC--
T ss_pred HHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CCeeccCchhcCceEEEEEcCcc--C-----------CCC--
Confidence 34567777777777 8999999999999999999987 88876652 344 677765310 0 011
Q ss_pred HHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 216 NKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 216 n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
..++.++|.++|....... ..+..++|+++.. .+++++++.+++.|+++.
T Consensus 313 ~~~~~~~l~~~gi~v~~~~-~~~~~~iRi~~~~-~~~~~~i~~~~~~l~~~~ 362 (366)
T 1m32_A 313 FSEFYRRLKEQGFVIYPGK-VSQSDCFRIGNIG-EVYAADITALLTAIRTAM 362 (366)
T ss_dssp HHHHHHHHHHTTEECEECC-CSSSCEEEEECCS-SCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCEEEECCc-CCCCCEEEEecCC-CCCHHHHHHHHHHHHHHH
Confidence 2468888888886543322 2245689997654 467999999999998764
No 252
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=98.77 E-value=2.7e-08 Score=107.44 Aligned_cols=219 Identities=11% Similarity=0.008 Sum_probs=141.7
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecC-CCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-------C
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGL-PDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-------N 91 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpv-d~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-------~ 91 (764)
.|+++.++++..|... +.||+ ++++++|+++|+++|++. ++-+++.+.+++++|.+.|++++++ +
T Consensus 97 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~d~~~l~~~l~~~----~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~ 169 (385)
T 2bkw_A 97 FSDRFADCLRSYGAQV---DVVRPLKIGESVPLELITEKLSQN----SYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPE 169 (385)
T ss_dssp HHHHHHHHHHHTTCEE---EEECCSSTTSCCCHHHHHHHHHHS----CCSEEEEESEETTTTEECCHHHHHHHHHHHCTT
T ss_pred chHHHHHHHHHcCCce---EEEecCCCCCCCCHHHHHHHHhcC----CCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCC
Confidence 4566668888889866 99999 889999999999999862 2235567789999999999999874 6
Q ss_pred CCceeccccc--------------------cc-c----c-eeeeecCCCcccccccc-----ccc-------c----CCc
Q psy13453 92 GPLKVGGVLR--------------------RV-Y----S-SCLVPRGQKSLRTTVLF-----HFL-------F----QHW 129 (764)
Q Consensus 92 ~wlHVDa~l~--------------------~~-y----~-s~ll~rd~~~l~~~~s~-----~~d-------~----~d~ 129 (764)
+|+|+|++.. ++ + + ++++.+++. +...+.. ... + ..+
T Consensus 170 ~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (385)
T 2bkw_A 170 TFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRF-MDYALNDSKNGHVHGYFSSLRRWTPIMENY 248 (385)
T ss_dssp SEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHH-HHHHTCHHHHCCCSCSTTCHHHHHHHHHHH
T ss_pred CEEEEECccccCCccccccccCceEEEecCccccccCCcceEEEEcHHH-HHHHHhhccCCCCCceeecHHHHhhHHHhh
Confidence 8999999531 11 0 0 223222211 0000000 000 0 000
Q ss_pred cc-----CCCCc-ccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHH-hcCCCeEEeCC-C----CceeEEEEeeccc
Q psy13453 130 QI-----PLGRR-FRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLV-EQDDRFELVCP-P----SMGLVCFRLKVRF 197 (764)
Q Consensus 130 tl-----e~SRr-~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I-~~~p~~ell~~-P----~l~iV~Fry~P~~ 197 (764)
.. .++.. ...+.+.+++..+...|+.++.++..++++++.+.| ++. +++++.+ + ..++++|++.
T Consensus 249 ~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~--- 324 (385)
T 2bkw_A 249 EAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGL-QLTSVSRYPSNMSAHGLTAVYVA--- 324 (385)
T ss_dssp HTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTT-CCEESSCSSSTTBCSSCEEEECS---
T ss_pred hccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhc-CceecccCcccccCCceEEEecC---
Confidence 00 01121 122355667777766778899999999999999999 887 8988752 2 3567888652
Q ss_pred cccccccccCccCCccHHHHHHHHHHHhcCcEEEEece-eCCeeEEEEe-cc-CC-CCCHHHHHHHHHHHHHHH
Q psy13453 198 WDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGS-FQDRLFMRFA-IC-SS-QTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 198 ~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~-l~g~~~LRi~-v~-np-~Tt~e~i~~~l~~l~~~~ 267 (764)
+ ..++.++|.+.|..+..... ..+..++|++ +. ++ .+++++++.+++.|+++.
T Consensus 325 -------------~----~~~~~~~l~~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~ 381 (385)
T 2bkw_A 325 -------------D----PPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLAL 381 (385)
T ss_dssp -------------C----HHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHT
T ss_pred -------------C----HHHHHHHHHHCCeEEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHHH
Confidence 1 34678888888864332211 1235789998 43 22 468999999999998764
No 253
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=98.76 E-value=6.7e-08 Score=108.84 Aligned_cols=177 Identities=13% Similarity=0.020 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.++++++++.+.+ ..+||+|||+||..|++++|..+..+ +.. ..+.+|.....-|
T Consensus 118 ~~~~~L~e~la~~~~~~~~---------~v~~~~sGseA~~~Alk~a~~~~~~~-g~~---------g~~~ii~~~~~yh 178 (457)
T 3tfu_A 118 EPAARLAKLLVDITPAGLD---------TVFFSDSGSVSVEVAAKMALQYWRGR-GLP---------GKRRLMTWRGGYH 178 (457)
T ss_dssp HHHHHHHHHHHHHSSTTEE---------EEEEESSHHHHHHHHHHHHHHHHHHT-TCT---------TCCEEEEETTCCC
T ss_pred HHHHHHHHHHHHhCCCCcC---------EEEEeCcHHHHHHHHHHHHHHHHHhc-CCC---------CCceEEEEcCCcC
Confidence 4455677888999875442 57899999999999999998764332 100 0123555566666
Q ss_pred hhHHHHHHhCC-------------CceEEEecC--CCCcccHHHHHHHHHHhhhcCCCceEEEEee-ccCCcccccc---
Q psy13453 642 SSVEKSAIIGD-------------VPVRQLRSD--DNGVLRGDALLTAVKEDLAKGLIPCCLIATL-GTTGTCAFDN--- 702 (764)
Q Consensus 642 ~Sv~kAa~~lG-------------l~v~~Vp~d--~~g~md~~~Le~~I~~~~~~G~~p~~Vvata-GTT~~GaiDp--- 702 (764)
-+..-+..+.+ ..+..+|.. ..+..|+++|+++|++.. ..+.+|++.- -++.+|.+-+
T Consensus 179 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~---~~~aavi~ep~~~~~~G~~~~~~~ 255 (457)
T 3tfu_A 179 GDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHA---GELAAVVVEPVVQGAGGMRFHDPR 255 (457)
T ss_dssp CSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHG---GGEEEEEECSSEECTTTCEECCTH
T ss_pred CccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCC---CCEEEEEEeCCCcCCCCcccCCHH
Confidence 54443333311 134444443 334479999999998532 1345666655 5667787765
Q ss_pred -HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCc-Cceee
Q psy13453 703 -LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNF-DCSAM 763 (764)
Q Consensus 703 -l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~-~~g~l 763 (764)
+++|+++|++||++|++|.+|.++......+.....|+ ..|-+|++ |.++..+ ..|++
T Consensus 256 ~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~-~pdiit~s--K~l~gG~~~lG~v 315 (457)
T 3tfu_A 256 YLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGV-SPDIMCVG--KALTGGYLSLAAT 315 (457)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGGGTTSSCCEEE
T ss_pred HHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCC-CceEEEEC--hhhhCCCcceEEE
Confidence 99999999999999999999987422111111112244 45777664 8776642 45543
No 254
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=98.76 E-value=1.8e-07 Score=105.00 Aligned_cols=178 Identities=15% Similarity=0.084 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
.....++.+|++++++.+. ...+||+|||+||..|+++++...... +.. .++.+|.....-
T Consensus 93 ~~~~~~la~~l~~~~~~~~---------~~v~~~~ggseA~~~al~~~~~~~~~~-g~~---------~~~~vi~~~~~y 153 (459)
T 4a6r_A 93 HPAVVELSSLLAEVTPAGF---------DRVFYTNSGSESVDTMIRMVRRYWDVQ-GKP---------EKKTLIGRWNGY 153 (459)
T ss_dssp CHHHHHHHHHHHHHSCTTC---------CEEEEESSHHHHHHHHHHHHHHHHHHT-TCT---------TCCEEEEETTCC
T ss_pred CHHHHHHHHHHHHhCCCCC---------CEEEEeCchHHHHHHHHHHHHHHHHhc-CCC---------CCCEEEEECCCc
Confidence 3455677789999987644 257899999999999999998764322 100 123456666677
Q ss_pred chhHHHHHHhCCC------------ceEEEecCC-----CCccc--------HHHHHHHHHHhhhcCCCceEEEEeeccC
Q psy13453 641 NSSVEKSAIIGDV------------PVRQLRSDD-----NGVLR--------GDALLTAVKEDLAKGLIPCCLIATLGTT 695 (764)
Q Consensus 641 H~Sv~kAa~~lGl------------~v~~Vp~d~-----~g~md--------~~~Le~~I~~~~~~G~~p~~VvataGTT 695 (764)
|-...-+....|. .+..++... ++ +| +++|+++|++... ..+.+|++.--..
T Consensus 154 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~~--~~~~~vi~ep~~~ 230 (459)
T 4a6r_A 154 HGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIGA--DKVAAFVGEPIQG 230 (459)
T ss_dssp CCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCG--GGEEEEEECSSBT
T ss_pred CCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcCC--CCEEEEEECCccC
Confidence 7555444444331 455566321 22 55 7889998875211 2345666666666
Q ss_pred Ccccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 696 GTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 696 ~~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
..|.+-+ +++|+++|++||++|++|-+|.++......+.....|+ ..|.++++ |.++.. +..|++
T Consensus 231 ~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~-~pdi~t~s--K~l~gg~~~lg~v 300 (459)
T 4a6r_A 231 AGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGF-QPDLFTAA--KGLSSGYLPIGAV 300 (459)
T ss_dssp TTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEEC--GGGGTTSSCCEEE
T ss_pred CCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CCCeeehh--hhhcCCCCCccce
Confidence 6777776 99999999999999999999887432221111122244 45888776 877644 345543
No 255
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=98.75 E-value=2.4e-07 Score=103.90 Aligned_cols=178 Identities=12% Similarity=0.031 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
....++.++++++++.+. ...+||+|||+||..|++++|...... +.. .++.+|.....-|
T Consensus 95 ~~~~~la~~l~~~~~~~~---------~~v~~~~gGseA~~~al~~~~~~~~~~-g~~---------~~~~vi~~~~~yh 155 (460)
T 3gju_A 95 EASITLAKMIIDRAPKGM---------SRVYFGLSGSDANETNIKLIWYYNNVL-GRP---------EKKKIISRWRGYH 155 (460)
T ss_dssp HHHHHHHHHHHHHSCTTE---------EEEEEESSHHHHHHHHHHHHHHHHHHT-TCT---------TCCEEEEETTCCC
T ss_pred HHHHHHHHHHHhhCCCCc---------CEEEEeCchHHHHHHHHHHHHHHHHhc-CCC---------CCCEEEEECCCcC
Confidence 455667788888876543 257899999999999999998754322 100 1134566677777
Q ss_pred hhHHHHHHhCCC------------ceEEEecCC-----CCccc--------HHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 642 SSVEKSAIIGDV------------PVRQLRSDD-----NGVLR--------GDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 642 ~Sv~kAa~~lGl------------~v~~Vp~d~-----~g~md--------~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
-+..-+....|. .+..+|... +..++ +++|+++|++.. ...+.+|++.--++.
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~--~~~~aaii~ep~~~~ 233 (460)
T 3gju_A 156 GSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEG--PETIAAFIGEPILGT 233 (460)
T ss_dssp CSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBST
T ss_pred CCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCC
Confidence 665555554332 466676432 11233 688999887521 123456666666666
Q ss_pred cccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 697 TCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 697 ~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
.|.+-+ +++|+++|++||++|++|-+|.++......+.....|+ ..|-++++ |.++.. +..|.+
T Consensus 234 ~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~-~pdi~t~s--K~l~gG~~~lg~v 302 (460)
T 3gju_A 234 GGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGI-KPDLITIA--KGLTSAYAPLSGV 302 (460)
T ss_dssp TTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CCSEEEEC--GGGTTTSSCCEEE
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CCCeeeee--hhhcCCCCCeEEE
Confidence 677655 99999999999999999999987532211111112244 35777765 988764 345543
No 256
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=98.70 E-value=3e-07 Score=103.02 Aligned_cols=175 Identities=13% Similarity=0.041 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
.....++.++++++++.+. ....+||+|||+||..|+++||.... ++.+|.....-
T Consensus 103 ~~~~~~la~~l~~~~~~~~--------~~~v~~~~sGseA~~~Alk~a~~~~g----------------~~~ii~~~~~y 158 (451)
T 3oks_A 103 YEGYVAVCEQLNRLTPVRG--------DKRSALFNSGSEAVENAVKIARSHTH----------------KPAVVAFDHAY 158 (451)
T ss_dssp CHHHHHHHHHHHHHSSCCS--------SEEEEEESSHHHHHHHHHHHHHHHHC----------------CCEEEEETTCC
T ss_pred CHHHHHHHHHHHHhCCcCC--------CCEEEEeCcHHHHHHHHHHHHHHhcC----------------CCeEEEEcCCc
Confidence 3455677889999886331 12579999999999999999886421 12355566666
Q ss_pred chhHHHHHHhCC-------------CceEEEecCCCC-------------cccHHHHHHHHHHhhhcCCCceEEEEeecc
Q psy13453 641 NSSVEKSAIIGD-------------VPVRQLRSDDNG-------------VLRGDALLTAVKEDLAKGLIPCCLIATLGT 694 (764)
Q Consensus 641 H~Sv~kAa~~lG-------------l~v~~Vp~d~~g-------------~md~~~Le~~I~~~~~~G~~p~~VvataGT 694 (764)
|-...-+..+.| ..+..+|..... .-+.+.+++.|++... +..+.+|++.--+
T Consensus 159 hG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~-~~~~aavi~ep~~ 237 (451)
T 3oks_A 159 HGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIG-ADNLAAVVIEPIQ 237 (451)
T ss_dssp CCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTC-GGGEEEEEECSSB
T ss_pred CCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcC-CCCEEEEEEcCCc
Confidence 755544444422 156777765211 1245556666654321 2235566665555
Q ss_pred CCcccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 695 TGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 695 T~~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
...|.+-+ +++|+++|++||++|++|-+|.+.......+.....|+ ..|.++++ |.++..+..|++
T Consensus 238 ~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~-~pdi~t~s--K~l~~G~~iG~v 307 (451)
T 3oks_A 238 GEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGI-DPDLIVTA--KGIAGGLPLSAV 307 (451)
T ss_dssp TTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTSSCEEE
T ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCC-CCCeeeeh--hhhhCCcceEEE
Confidence 55677755 99999999999999999999987432211111122243 45777665 988765556654
No 257
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=98.70 E-value=3.1e-07 Score=103.92 Aligned_cols=177 Identities=15% Similarity=0.108 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
.....++.++++++++.+. ...+|++||||||..|++++|...... +.. .++.+|.....-
T Consensus 98 ~~~~~~lae~l~~~~~~~~---------~~v~~~~sGseA~~~aik~a~~~~~~~-g~~---------~~~~ii~~~~~y 158 (472)
T 3hmu_A 98 HVPAIALAQKLAELAPGDL---------NHVFFAGGGSEANDTNIRMVRTYWQNK-GQP---------EKTVIISRKNAY 158 (472)
T ss_dssp CHHHHHHHHHHHHHSCTTE---------EEEEEESSHHHHHHHHHHHHHHHHHHT-TCT---------TCCEEEEETTCC
T ss_pred CHHHHHHHHHHHHhCCCCC---------CEEEEeCCHHHHHHHHHHHHHHHHHhc-CCC---------CCCEEEEEcCcC
Confidence 3455566678888876543 257899999999999999999764322 110 113456666677
Q ss_pred chhHHHHHHhCCC-----------ceEEEecCC-----CCccc--------HHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 641 NSSVEKSAIIGDV-----------PVRQLRSDD-----NGVLR--------GDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 641 H~Sv~kAa~~lGl-----------~v~~Vp~d~-----~g~md--------~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
|-...-+....|. .+..+|... ++ +| +++|+++|++... ..+.+|++.--...
T Consensus 159 Hg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~--~~~aavi~epv~~~ 235 (472)
T 3hmu_A 159 HGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELGE--NRVAAFIAEPVQGA 235 (472)
T ss_dssp CCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCG--GGEEEEEECSSBST
T ss_pred CCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcCC--CCEEEEEEcCccCC
Confidence 7555555444432 456666432 22 44 7889998875311 23556666666666
Q ss_pred cccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCcee
Q psy13453 697 TCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSA 762 (764)
Q Consensus 697 ~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~ 762 (764)
.|.+-+ +++|+++|++||++|++|-+|.|+......+.....|+ ..|-++++ |.++.. +..|+
T Consensus 236 gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v-~pdi~t~s--K~l~gg~~plG~ 303 (472)
T 3hmu_A 236 GGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGI-RPHIMTIA--KGLSSGYAPIGG 303 (472)
T ss_dssp TTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CCSEEEEC--GGGTTTSSCCEE
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCC-CCceeeec--hhhhcCCcceEE
Confidence 788777 99999999999999999999987532221111122344 46888776 987754 24444
No 258
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=98.69 E-value=8.9e-08 Score=107.30 Aligned_cols=173 Identities=12% Similarity=0.027 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHcC-CCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 563 LEVLVMNWLGKALG-LPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 563 lE~~v~~~la~llG-~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
...++.+.++++++ .+. ...+||+|||+||..|+.++|.....+....+ .. ...++-+|+....-|
T Consensus 102 ~~~~la~~la~~~~~~~~---------~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~--~~--~~~~~~Vi~~~~~yh 168 (449)
T 2cjg_A 102 AMARFVETFARVLGDPAL---------PHLFFVEGGALAVENALKAAFDWKSRHNQAHG--ID--PALGTQVLHLRGAFH 168 (449)
T ss_dssp HHHHHHHHHHHHHCCTTC---------CEEEEESSHHHHHHHHHHHHHHHHHHHHHHTT--SC--TTCCCEEEEETTCCC
T ss_pred HHHHHHHHHHHhcCCCCC---------CEEEEeCchHHHHHHHHHHHHHHhcccccccc--cc--cCCCCEEEEECCCcC
Confidence 34455566777776 222 35799999999999999988754321000000 00 000123444444556
Q ss_pred hhHHHHHHh--------CCC-----ceEEEecCC--CC--------cccHHHHHHHHHHhhhcCCCceEEEEeeccCCcc
Q psy13453 642 SSVEKSAII--------GDV-----PVRQLRSDD--NG--------VLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTC 698 (764)
Q Consensus 642 ~Sv~kAa~~--------lGl-----~v~~Vp~d~--~g--------~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~G 698 (764)
.+..-+... .+. .+..+|.++ .. ..++++|+++|++. +..+.+|++.--++.+|
T Consensus 169 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~---~~~~~~vi~ep~~~~~G 245 (449)
T 2cjg_A 169 GRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETR---PHDIACFVAEPIQGEGG 245 (449)
T ss_dssp CSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHS---TTTEEEEEECSEETTTT
T ss_pred CcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhc---CCceEEEEEeCcCCCCC
Confidence 433322221 222 567777654 22 36788899998642 12355666665556689
Q ss_pred cccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccC
Q psy13453 699 AFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWL 754 (764)
Q Consensus 699 aiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l 754 (764)
.+-+ +++|+++|++||++|++|.+|.+.......+.....++ ..|.++++ |++
T Consensus 246 ~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~-~~di~t~s--K~l 302 (449)
T 2cjg_A 246 DRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDV-APDIVAFG--KKT 302 (449)
T ss_dssp CEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGG
T ss_pred CccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCC-CceEEEec--Ccc
Confidence 7666 99999999999999999999997422211111111233 35877765 987
No 259
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=98.66 E-value=1.7e-07 Score=101.37 Aligned_cols=212 Identities=11% Similarity=0.012 Sum_probs=139.0
Q ss_pred HHHHHhhcCCCCCCeEEecCC--CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhh--------c-CC
Q psy13453 24 SFKATHSLSGTPDQVRLSGLP--DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPV--------S-NG 92 (764)
Q Consensus 24 v~KAa~~LGl~~~~v~~Vpvd--~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia--------~-~~ 92 (764)
+.+.++..|... +.||++ +++.+|+++|+++|++. +-+++.+.+++++|.+-|++++. + ++
T Consensus 118 ~~~~~~~~g~~~---~~v~~~~~~~~~~d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~ 189 (390)
T 1elu_A 118 VQAIAARFGITY---RFFPVAATLNQGDAAAVLANHLGPK-----TRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPV 189 (390)
T ss_dssp HHHHHHHHCCEE---EEECCGGGSSSSCHHHHHHTTCCTT-----EEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCC
T ss_pred HHHHHHHhCcEE---EEEcCCCCCCccchHHHHHHhcCCC-----ceEEEEeccccCCceecCHHHHHHHHhhhhhhcCc
Confidence 344577888866 999997 68899999999998642 22446788899999999998865 3 67
Q ss_pred Cceeccccc--------------------cc-----cc-eeeeecCCCccccccccc---------------cccCC--c
Q psy13453 93 PLKVGGVLR--------------------RV-----YS-SCLVPRGQKSLRTTVLFH---------------FLFQH--W 129 (764)
Q Consensus 93 wlHVDa~l~--------------------~~-----y~-s~ll~rd~~~l~~~~s~~---------------~d~~d--~ 129 (764)
++++|++.. ++ ++ ++++.++. .... +... +++.+ .
T Consensus 190 ~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~-~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~ 267 (390)
T 1elu_A 190 RVLVDGAQSAGSLPLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGD-CLGE-INPTYVGWRSITYGAKGEPTGWAEGGK 267 (390)
T ss_dssp EEEEECTTTBTTBCCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTT-TGGG-CCCCSCCTTTEEECTTSCEEEECSGGG
T ss_pred EEEEEcccccCCcCCChhhcCCCEEEccccccccCCCceEEEEECHH-hHhh-cCCccccCCcccccccCcccccccchH
Confidence 899997421 11 11 34443321 1110 0000 00000 0
Q ss_pred ccC-CCCc-ccHHHHHHHHHHccHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEeCC--CCceeEEEEeecccccccccc
Q psy13453 130 QIP-LGRR-FRALKLWMTLRSYGLKG-LQAYLRKHISLAKKFADLVEQDDRFELVCP--PSMGLVCFRLKVRFWDKLDNL 204 (764)
Q Consensus 130 tle-~SRr-~~ALklWatL~~lG~eG-y~~~i~~~i~lA~~l~~~I~~~p~~ell~~--P~l~iV~Fry~P~~~~~~~~~ 204 (764)
.+. ++-. .....+++++..+..+| +.++.++..++++++.+.|++.++++++.+ +..++++|++. +
T Consensus 268 ~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~-~-------- 338 (390)
T 1elu_A 268 RFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVD-S-------- 338 (390)
T ss_dssp GGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEEC-S--------
T ss_pred hhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEEEcC-C--------
Confidence 111 1222 12234567787776667 888999999999999999999999998863 46778888653 1
Q ss_pred ccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 205 FGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 205 ~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
+.+ ..++.++|.+.|..+.... +..++|+++ +..+++++++.+++.|+++
T Consensus 339 ------~~~--~~~~~~~l~~~gi~v~~~~---~~~~iRis~-~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 339 ------PLG--HRAIVQKLEEQRIYLRTIA---DPDCIRACC-HYITDEEEINHLLARLADF 388 (390)
T ss_dssp ------SSC--HHHHHHHHHHTTEECEEET---TTTEEEEEC-CTTCCHHHHHHHHHHHTTC
T ss_pred ------CCC--HHHHHHHHHHCCEEEEecC---CCCeEEEec-ccCCCHHHHHHHHHHHHhh
Confidence 111 2467888888887544432 446899975 5567899999999988653
No 260
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=98.65 E-value=1.2e-07 Score=107.19 Aligned_cols=182 Identities=9% Similarity=-0.081 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhh-hcc---CC------CCCcccccc
Q psy13453 560 CTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINH-WQS---KN------PSLTENDIR 629 (764)
Q Consensus 560 ~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~-~~~---~~------~~~~~~~~~ 629 (764)
..++++.+.+.++++++... ...+||+||||||..|+++||.....+ .+. .+ ..-..++-.
T Consensus 108 ~~~l~~~la~~l~~~~~~~~---------~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~ 178 (472)
T 1ohv_A 108 PENFVEKLRESLLSVAPKGM---------SQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCP 178 (472)
T ss_dssp BTTHHHHHHHTGGGGCCTTC---------CEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSC
T ss_pred HHHHHHHHHHHHHHhCCCCc---------CEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCC
Confidence 34677777777777664322 257899999999999999998653210 000 00 000000000
Q ss_pred CceEEEecCCcchhHHHHHHhCCCc-----------eEEEecCC-CC-------------cccHHHHHHHHHHhhhcCCC
Q psy13453 630 NKLVAYTSDQSNSSVEKSAIIGDVP-----------VRQLRSDD-NG-------------VLRGDALLTAVKEDLAKGLI 684 (764)
Q Consensus 630 ~~~vi~~S~~aH~Sv~kAa~~lGl~-----------v~~Vp~d~-~g-------------~md~~~Le~~I~~~~~~G~~ 684 (764)
++-+|.....-|-+..-+..+.|.. +..++... .+ ..|+++|+++|++....+..
T Consensus 179 r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 258 (472)
T 1ohv_A 179 DYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKT 258 (472)
T ss_dssp CCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCC
Confidence 1345666667787666665554421 12233211 11 34789999999764322223
Q ss_pred ceEEEEeeccCCcccccc----HHHHHHHHHhcCCEEEEeccccccccccch-hhhhhcCCC-cccEEEEcCCcc
Q psy13453 685 PCCLIATLGTTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPE-YAHLKRGLE-YVDSFDFNTHKW 753 (764)
Q Consensus 685 p~~VvataGTT~~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~-~r~~l~gie-~aDSit~d~HK~ 753 (764)
+.+|++..-.+++|.+-| +++|+++|++||++||+|.+|.|+-. ... +.....|+. ..|.++++ |+
T Consensus 259 ~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~-~g~~~~~~~~gv~~~~Di~t~s--K~ 330 (472)
T 1ohv_A 259 VAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGS-TGKFWAHEHWGLDDPADVMTFS--KK 330 (472)
T ss_dssp EEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTT-TSSSSGGGGGCCSSCCSEEEEC--GG
T ss_pred EEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCC-CCCchhccccCCCCCCCEEEEc--cc
Confidence 557777666677898877 99999999999999999999986221 111 111112442 36888776 98
No 261
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=98.65 E-value=9.6e-08 Score=102.72 Aligned_cols=221 Identities=11% Similarity=0.032 Sum_probs=139.2
Q ss_pred eeeeHHHHHhhcCCCCCCeEEec--CCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSG--LPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NG 92 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vp--vd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~ 92 (764)
.|+|...+++..|+.. +.|| +++++.+|+++|+++|++.....++-+++.+.+++++|.+.|++++.+ ++
T Consensus 102 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~ 178 (371)
T 2e7j_A 102 CHYSSYVAAERAGLNI---ALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDV 178 (371)
T ss_dssp CCHHHHHHHHHTTCEE---EEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTC
T ss_pred cchHHHHHHHHcCCeE---EEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCCHHHHHHHHHHcCC
Confidence 5789999999999876 9999 888899999999999986533223334468889999999999999876 88
Q ss_pred Cceeccccc--------------------cc-----c-ceeeeecCCCccccccccccc-c-CCccc-CCCCccc-HHHH
Q psy13453 93 PLKVGGVLR--------------------RV-----Y-SSCLVPRGQKSLRTTVLFHFL-F-QHWQI-PLGRRFR-ALKL 142 (764)
Q Consensus 93 wlHVDa~l~--------------------~~-----y-~s~ll~rd~~~l~~~~s~~~d-~-~d~tl-e~SRr~~-ALkl 142 (764)
|+++|++.. ++ . +++++.+++ .....+..... + .++.. .++-... ...+
T Consensus 179 ~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 257 (371)
T 2e7j_A 179 PLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEE-WAEIVLRRSEKYKNKEVELLGCTARGATIITL 257 (371)
T ss_dssp CEEEECTTTBTTBCCCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTT-TTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHH
T ss_pred eEEEECccccCCCCCChhhcCCCEEEecCCcCCCCCCCcEEEEEech-hhhhhccccccCcccccccccCCcCHHHHHHH
Confidence 999999531 11 1 134444432 11110000000 0 00000 1222222 2234
Q ss_pred HHHHHHccHHHHHHHHHHH--HHHHHHHHHHHhcCCCeEEeCCC--CceeEEEEeeccccccccccccCccCCccHHHHH
Q psy13453 143 WMTLRSYGLKGLQAYLRKH--ISLAKKFADLVEQDDRFELVCPP--SMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKA 218 (764)
Q Consensus 143 WatL~~lG~eGy~~~i~~~--i~lA~~l~~~I~~~p~~ell~~P--~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~ 218 (764)
.++++.+.. ++.++. .++++++.+.|++. +++++.++ ..++++|++. -..+
T Consensus 258 ~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~--------------------~~~~ 312 (371)
T 2e7j_A 258 MASFPHVRE----RIKRWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAE--------------------VLYE 312 (371)
T ss_dssp HHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECH--------------------HHHH
T ss_pred HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCccCceEEEECC--------------------CHHH
Confidence 455555433 566667 78999999999988 99988754 4667777642 0134
Q ss_pred HHHHHHhcCcEEEE-ecee--CC--eeEEE-EeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 219 VYDRIIARKVIYIV-KGSF--QD--RLFMR-FAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 219 L~~~L~~~G~~~vs-~t~l--~g--~~~LR-i~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
+.++|.+.|..... .... ++ ..++| +++....+++++++.+++.|+++.++
T Consensus 313 ~~~~l~~~gi~~~~~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~ 369 (371)
T 2e7j_A 313 ISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEK 369 (371)
T ss_dssp HHHHSSSGGGHHHHHHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEEeccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHh
Confidence 55566655653211 0001 02 46799 87765547899999999999887654
No 262
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=98.65 E-value=1.4e-07 Score=100.47 Aligned_cols=220 Identities=11% Similarity=-0.019 Sum_probs=138.2
Q ss_pred eeeeHH--HHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-------
Q psy13453 20 LIYESF--KATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS------- 90 (764)
Q Consensus 20 ~~YSv~--KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~------- 90 (764)
.|+|.. +.+...|... +.||+++++.+|+++|++ + ++-+++.+.+++++|.+.|++++++
T Consensus 84 ~~~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~---~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~ 152 (352)
T 1iug_A 84 GKFSERFYEIALEAGLVV---ERLDYPYGDTPRPEDVAK---E-----GYAGLLLVHSETSTGALADLPALARAFKEKNP 152 (352)
T ss_dssp SHHHHHHHHHHHHTTCEE---EEEECCTTCCCCTTTSCC---S-----SCSEEEEESEETTTTEECCHHHHHHHHHHHCT
T ss_pred CchhHHHHHHHHHcCCce---EEEeCCCCCCCCHHHHhc---c-----CCcEEEEEEecCCcceecCHHHHHHHHHhhCC
Confidence 366643 5556678765 999999889999999887 1 2235567889999999999999874
Q ss_pred CCCceeccccccc--------cc-eeeeecCCCccccc----c-ccccc---c----------C-------CcccCCCCc
Q psy13453 91 NGPLKVGGVLRRV--------YS-SCLVPRGQKSLRTT----V-LFHFL---F----------Q-------HWQIPLGRR 136 (764)
Q Consensus 91 ~~wlHVDa~l~~~--------y~-s~ll~rd~~~l~~~----~-s~~~d---~----------~-------d~tle~SRr 136 (764)
++|+++|++.... +. .++...-.+.+... + ....+ . . .....++-.
T Consensus 153 ~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (352)
T 1iug_A 153 EGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGLMCPPGLGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPA 232 (352)
T ss_dssp TCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCC
T ss_pred CCEEEEECCccccCcceeccccCeeEEEecCcccccCCCceeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCC
Confidence 6899999863200 00 01111111111100 0 00000 0 0 000111111
Q ss_pred cc-HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC-CceeEEEEeeccccccccccccCccCCccH
Q psy13453 137 FR-ALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP-SMGLVCFRLKVRFWDKLDNLFGTISFGDND 214 (764)
Q Consensus 137 ~~-ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P-~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~ 214 (764)
.. ...+.+++..+... +.++.++..++++++.+.|++. +++++.++ ..++++|++.. +.+
T Consensus 233 ~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~---------------~~~- 294 (352)
T 1iug_A 233 INLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEG-GLRPVPKRFSPAVAAFYLPE---------------GVP- 294 (352)
T ss_dssp HHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHT-TCEESCSSBCTTCEEEECCT---------------TCC-
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHC-CCcccccccCCeEEEEEcCC---------------CCC-
Confidence 11 22445666665555 8899999999999999999998 89987654 45678887531 111
Q ss_pred HHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 215 LNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 215 ~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
..++.++|.++|........-.+..++|+++.. .+++++++.+++.|+++.+++
T Consensus 295 -~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~-~~~~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 295 -YARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMG-AYDRYEALGVAGMFREVLEEI 348 (352)
T ss_dssp -HHHHHHHHHTTTEECEECCGGGTTTEEEECCCS-SCCHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHCCEEEEeCCCccCCCEEEEEccc-cCCHHHHHHHHHHHHHHHHHh
Confidence 246888888888755443322235689997655 567999999999999987765
No 263
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=98.62 E-value=7.6e-07 Score=99.88 Aligned_cols=176 Identities=15% Similarity=0.045 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
.....++.++++++++.+.. ...+||+||||||..|+++||... . ++.+|.....-
T Consensus 106 ~~~~~~la~~l~~~~~~~~~--------~~v~~~~sGseA~~~alk~a~~~~-g---------------~~~ii~~~~~y 161 (453)
T 4ffc_A 106 YEQYVQVAELLNALTPGDHD--------KRTALFNSGAEAVENAIKVARLAT-G---------------RPAVVAFDNAY 161 (453)
T ss_dssp CHHHHHHHHHHHHHSSCSSC--------EEEEEESSHHHHHHHHHHHHHHHH-C---------------CCEEEEETTCC
T ss_pred CHHHHHHHHHHHHhCCCCCC--------cEEEEeCcHHHHHHHHHHHHHHhc-C---------------CCEEEEEcCcc
Confidence 45556778899999874321 257999999999999999988642 1 12356666777
Q ss_pred chhHHHHHHhCCC-------------ceEEEecCC----CCccc-HHHHHHHHHHhhh--cCCCceEEEEeeccCCcccc
Q psy13453 641 NSSVEKSAIIGDV-------------PVRQLRSDD----NGVLR-GDALLTAVKEDLA--KGLIPCCLIATLGTTGTCAF 700 (764)
Q Consensus 641 H~Sv~kAa~~lGl-------------~v~~Vp~d~----~g~md-~~~Le~~I~~~~~--~G~~p~~VvataGTT~~Gai 700 (764)
|-...-+..+.|. .+..+|... ...++ .+.++..++...+ ....+.+|+..--+...|.+
T Consensus 162 hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~ 241 (453)
T 4ffc_A 162 HGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFI 241 (453)
T ss_dssp CCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSB
T ss_pred CCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcc
Confidence 7555555444321 467777641 11122 2333322221111 11234455555555555666
Q ss_pred cc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 701 DN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 701 Dp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
-+ +++|+++|++||++|++|-+|.++......+.....|+ ..|-++++ |.++..+..|.+
T Consensus 242 ~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~-~pdi~t~s--K~~~~G~~~G~~ 305 (453)
T 4ffc_A 242 VPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGI-VPDIVTMA--KGIAGGMPLSAV 305 (453)
T ss_dssp CCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGGGTTSSCEEE
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCC-CcchHhhh--hhhcCCcCeEEE
Confidence 55 99999999999999999999987432211111112233 35777765 887664555554
No 264
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=98.62 E-value=8.1e-07 Score=96.55 Aligned_cols=218 Identities=11% Similarity=0.013 Sum_probs=139.1
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC-CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD-SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~-~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
.|.++..++..+|... +.||+++ ++.+|+++|+++|++. +-+|. ++.++|.+.|++++++ +++
T Consensus 87 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~--~~n~tG~~~~l~~i~~la~~~~~~ 155 (388)
T 1b9h_A 87 TFISSSQAAQRLGAVT---VPVDVDAATYNLDPEAVAAAVTPR------TKVIM--PVHMAGLMADMDALAKISADTGVP 155 (388)
T ss_dssp SCTHHHHHHHHTTCEE---EEECBCTTTCCBCHHHHHHHCCTT------EEEEC--CBCGGGCCCCHHHHHHHHHHHTCC
T ss_pred ccHHHHHHHHHcCCEE---EEEecCCCcCCCCHHHHHHhcCcC------ceEEE--EeCCccCcCCHHHHHHHHHHcCCE
Confidence 5888999999999876 9999986 5899999999999642 23332 7888999999999886 899
Q ss_pred ceecccccc--cc--------------------------ceeeeecCCCc--cccccccccccC---------CcccCCC
Q psy13453 94 LKVGGVLRR--VY--------------------------SSCLVPRGQKS--LRTTVLFHFLFQ---------HWQIPLG 134 (764)
Q Consensus 94 lHVDa~l~~--~y--------------------------~s~ll~rd~~~--l~~~~s~~~d~~---------d~tle~S 134 (764)
+|+|++... .+ +++++.++... +... .....++ ......+
T Consensus 156 li~D~a~~~g~~~~~~~~~~~~~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~ 234 (388)
T 1b9h_A 156 LLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDGETEKYETA-FLRHSCGRPRDDRRYFHKIAGSN 234 (388)
T ss_dssp BCEECTTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHH-HHHTBTTCCTTCSSCCCCSCCCB
T ss_pred EEEecchhcCCccCCeecccccceEEEEccCCCcccCCCeEEEEECCHHHHHHHHH-HHHHhCCCCccCccceeeccccc
Confidence 999995321 01 12333222211 1100 0000000 0011112
Q ss_pred CcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC-----CC-ceeEEEEeeccccccccccccCc
Q psy13453 135 RRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCP-----PS-MGLVCFRLKVRFWDKLDNLFGTI 208 (764)
Q Consensus 135 Rr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~-----P~-l~iV~Fry~P~~~~~~~~~~~~~ 208 (764)
-+...+..|+.+.. .+.+.+.+++..++++++.+.|++.|++++..+ +. .+++.|++..
T Consensus 235 ~~~~~~~~a~~~~~--~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 299 (388)
T 1b9h_A 235 MRLNEFSASVLRAQ--LARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPG------------- 299 (388)
T ss_dssp CBCBHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTT-------------
T ss_pred CCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCC-------------
Confidence 23455555654433 455777888888999999999999999998763 22 4577776531
Q ss_pred cCCccHH-HHHHHHHHHhcCcEEEEec-eeC-C---------------------------eeEEEEeccCCCC-CHHHHH
Q psy13453 209 SFGDNDL-NKAVYDRIIARKVIYIVKG-SFQ-D---------------------------RLFMRFAICSSQT-EESDVQ 257 (764)
Q Consensus 209 ~~~~d~~-n~~L~~~L~~~G~~~vs~t-~l~-g---------------------------~~~LRi~v~np~T-t~e~i~ 257 (764)
.+.. ..++.++|.++|....... ..+ . ...||+. +++.+ ++++++
T Consensus 300 ---~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~-~~~~~~t~edi~ 375 (388)
T 1b9h_A 300 ---LTEERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLH-HRVLLAGEPELH 375 (388)
T ss_dssp ---CCHHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEE-GGGGGSCHHHHH
T ss_pred ---cCcccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEec-CCCCCCCHHHHH
Confidence 1111 2578888888897553321 110 0 1368985 45555 999999
Q ss_pred HHHHHHHHHHH
Q psy13453 258 LGWNEIRTATE 268 (764)
Q Consensus 258 ~~l~~l~~~~~ 268 (764)
.+++.|+++.+
T Consensus 376 ~~~~~l~~~~~ 386 (388)
T 1b9h_A 376 ATAEIIADAVA 386 (388)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999988764
No 265
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=98.61 E-value=9.6e-07 Score=99.92 Aligned_cols=178 Identities=11% Similarity=-0.024 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
.....++.+|++++++.+. ...+||+|||+||..|++++|.....+ +.. .++.+|.....-
T Consensus 96 ~~~~~~la~~l~~~~~~~~---------~~v~~~~sGseA~~~Aik~a~~~~~~~-g~~---------~~~~vi~~~~~y 156 (476)
T 3i5t_A 96 TSPAARLAEKIATLTPGDL---------NRIFFTTGGSTAVDSALRFSEFYNNVL-GRP---------QKKRIIVRYDGY 156 (476)
T ss_dssp CHHHHHHHHHHHTTSSTTC---------CEEEEESSHHHHHHHHHHHHHHHHHHT-TCT---------TCCEEEEETTCC
T ss_pred CHHHHHHHHHHHhcCCCCc---------CEEEEeCchHHHHHHHHHHHHHHHHhc-CCC---------CCCEEEEEcCCc
Confidence 4566677889999886543 257899999999999999999865332 110 123466667777
Q ss_pred chhHHHHHHhCCC------------ceEEEecCCC--C-ccc--------HHHHHHHHHHhhhcCCCceEEEEeeccCCc
Q psy13453 641 NSSVEKSAIIGDV------------PVRQLRSDDN--G-VLR--------GDALLTAVKEDLAKGLIPCCLIATLGTTGT 697 (764)
Q Consensus 641 H~Sv~kAa~~lGl------------~v~~Vp~d~~--g-~md--------~~~Le~~I~~~~~~G~~p~~VvataGTT~~ 697 (764)
|-+..-+....|. .+..++.... + ..| +++|+++|++.. ...+.+|++.--....
T Consensus 157 Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~ep~~~~~ 234 (476)
T 3i5t_A 157 HGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLG--PDTIAAFLAEPILASG 234 (476)
T ss_dssp CCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTT
T ss_pred CcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCC
Confidence 7666555554432 2445553221 1 122 789999887531 1234566666666667
Q ss_pred ccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhh-hcCCCcccEEEEcCCccCCCC-cCcee
Q psy13453 698 CAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHL-KRGLEYVDSFDFNTHKWLLVN-FDCSA 762 (764)
Q Consensus 698 GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~-l~gie~aDSit~d~HK~l~~P-~~~g~ 762 (764)
|.+-+ |++|+++|++||++|++|-+|.++......+... ..|+ ..|-++++ |.++.. +..|+
T Consensus 235 G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v-~pdi~t~s--K~l~~G~~plg~ 302 (476)
T 3i5t_A 235 GVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGV-VPDIITFA--KGVTSGYVPLGG 302 (476)
T ss_dssp TSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCC-CCSEEEEC--GGGGTTSSCCEE
T ss_pred CcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCC-Ccchhhhh--hhhcCCCcCeEE
Confidence 76555 9999999999999999999998743222111122 2344 46888776 887754 34444
No 266
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=98.60 E-value=1.8e-07 Score=102.23 Aligned_cols=218 Identities=7% Similarity=-0.030 Sum_probs=134.2
Q ss_pred eeeeHHHHHhh----cCCCCCCeEEecCC-CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc----
Q psy13453 20 LIYESFKATHS----LSGTPDQVRLSGLP-DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS---- 90 (764)
Q Consensus 20 ~~YSv~KAa~~----LGl~~~~v~~Vpvd-~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~---- 90 (764)
.|.|+..+... .|... +.||++ +++.+|+++|+++|+++ +-+++.+.+++++|.+.|++++++
T Consensus 122 ~~~~~~~~~~~~~~~~g~~v---~~v~~~~~~~~~d~~~l~~~l~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~ 193 (406)
T 3cai_A 122 DDEANIAPWLRAAHRYGAKV---KWAEVDIETGELPTWQWESLISKS-----TRLVAVNSASGTLGGVTDLRAMTKLVHD 193 (406)
T ss_dssp SCGGGTHHHHHHHHHHBCEE---EEECCCTTTCCCCGGGHHHHCCTT-----EEEEEEESBCTTTCBBCCCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCCeE---EEEecCcccCCcCHHHHHHHhCCC-----ceEEEEeCCcCCccccCCHHHHHHHHHH
Confidence 34455444444 68765 999998 78999999999999642 224467889999999999999876
Q ss_pred -CCCceecccccc--------------------c----cce-eeeecCCCcccccccc-ccccCC---ccc-CCCCcccH
Q psy13453 91 -NGPLKVGGVLRR--------------------V----YSS-CLVPRGQKSLRTTVLF-HFLFQH---WQI-PLGRRFRA 139 (764)
Q Consensus 91 -~~wlHVDa~l~~--------------------~----y~s-~ll~rd~~~l~~~~s~-~~d~~d---~tl-e~SRr~~A 139 (764)
++++++|++... + .++ +++.++ +... .+.. ...++. ..+ .++....+
T Consensus 194 ~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~~g~~~G~~~~~~~-~~~~-~l~~~~~~~~~~~~~~~~~~t~~~~~ 271 (406)
T 3cai_A 194 VGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWGGPPIGAMVFRDP-SVMN-SFGSVSTNPYATGPARLEIGVHQFGL 271 (406)
T ss_dssp TTCEEEEECTTTTTTCCCCHHHHCCSEEEEEGGGGTSCSCEEEEESCH-HHHH-TSCCCCSCTTCCGGGGGCCSCCCHHH
T ss_pred cCCEEEEEcccccCCCCCCchhcCCCEEEeehhhhcCCCcCeEEEEeh-HHHh-hcCCcccCCCCCccccccCCCccHHH
Confidence 899999995321 0 012 333221 1000 0000 000000 001 12221111
Q ss_pred H-HHHHHHHHc---cH-----------HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC--CceeEEEEeecccccccc
Q psy13453 140 L-KLWMTLRSY---GL-----------KGLQAYLRKHISLAKKFADLVEQDDRFELVCPP--SMGLVCFRLKVRFWDKLD 202 (764)
Q Consensus 140 L-klWatL~~l---G~-----------eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P--~l~iV~Fry~P~~~~~~~ 202 (764)
+ .+-+++..+ |. +++.++.++..++++++.+.|++.++++++.++ ..++++|++..
T Consensus 272 ~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------- 344 (406)
T 3cai_A 272 LAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVHK------- 344 (406)
T ss_dssp HHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCSEEEEEETT-------
T ss_pred HHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCCEEEEEECC-------
Confidence 1 223334332 31 157888899999999999999999999987653 36678887531
Q ss_pred ccccCccCCccHHHHHHHHHHHhcCcEEEEec--------ee-CCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 203 NLFGTISFGDNDLNKAVYDRIIARKVIYIVKG--------SF-QDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 203 ~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t--------~l-~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
.+ ..++.++|.+.|....... .+ .+..++|+++. ..+++++++.+++.|+++
T Consensus 345 ---------~~--~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~-~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 345 ---------VP--ADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLA-HYSTMAEVDQLVRALASL 405 (406)
T ss_dssp ---------BC--HHHHHHHHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECC-TTCCHHHHHHHHHHHHTC
T ss_pred ---------cC--HHHHHHHHHHCCcEEecCChHHHHHHcCCCCCCCeEEEEee-cCCCHHHHHHHHHHHHHh
Confidence 11 2467788888887554332 11 12468999764 556899999999988753
No 267
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=98.58 E-value=8.8e-08 Score=104.25 Aligned_cols=225 Identities=8% Similarity=-0.066 Sum_probs=117.4
Q ss_pred eeeeHHHHHhhc---CCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----C
Q psy13453 20 LIYESFKATHSL---SGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----N 91 (764)
Q Consensus 20 ~~YSv~KAa~~L---Gl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~ 91 (764)
.|.|+..++..+ |... +.||+++++.+|+++|+++|+++ +-+++.+.++.++|.+.|++++.+ +
T Consensus 118 ~~~~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~l~~i~~la~~~~ 189 (400)
T 3vax_A 118 EHKAVLEPLEHLAGRGFEV---DFLTPGPSGRISVEGVMERLRPD-----TLLVSLMHVNNETGVIQPVAELAQQLRATP 189 (400)
T ss_dssp SCHHHHHHHHHHHTTTCEE---EEECCCTTCCCCHHHHHTTCCTT-----EEEEECCSBCTTTCBBCCHHHHHHHHTTSS
T ss_pred ccHhHHHHHHHHHhcCCeE---EEEccCCCCCcCHHHHHHhcCCC-----ceEEEEECCCCCceeeCcHHHHHHHHHhcC
Confidence 366777766665 6655 99999999999999999998753 224467788999999999999876 8
Q ss_pred CCceeccccccc--------------------c----ceeee-ecCCCccccccccccccCCcccC-C--CCcccHHHHH
Q psy13453 92 GPLKVGGVLRRV--------------------Y----SSCLV-PRGQKSLRTTVLFHFLFQHWQIP-L--GRRFRALKLW 143 (764)
Q Consensus 92 ~wlHVDa~l~~~--------------------y----~s~ll-~rd~~~l~~~~s~~~d~~d~tle-~--SRr~~ALklW 143 (764)
+++++|++.... + .++++ .+++............+..++.. . +.......++
T Consensus 190 ~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (400)
T 3vax_A 190 TYLHVDAAQGYGKVPGDLTTPIDMISISGHKIGAPKGVGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIM 269 (400)
T ss_dssp CEEEEECTTTTTTSGGGGGSCCSEEEEETGGGTSCSSCEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHH
T ss_pred CEEEEEhhhhcCCCCcChhhcCcEEEEeHHHhCCCCceEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHH
Confidence 899999853210 0 01222 32211000000000000000000 0 0011222222
Q ss_pred ---HHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC---ceeEEEEeeccccccccccccCccCCccHHHH
Q psy13453 144 ---MTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS---MGLVCFRLKVRFWDKLDNLFGTISFGDNDLNK 217 (764)
Q Consensus 144 ---atL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~---l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~ 217 (764)
+++.. ..+++.++.++..++++++.+.|+ .+++++..++. .+++.|+... . +.+++-.
T Consensus 270 a~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~--~------------~~~~l~~ 333 (400)
T 3vax_A 270 GLAEAAKI-FEAEHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHILNLSFED--V------------DAEAFLV 333 (400)
T ss_dssp HHHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTEEEEECTT--C------------CHHHHHH
T ss_pred HHHHHHHH-HHhhHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCEEEEEeCC--C------------CHHHHHH
Confidence 33332 356789999999999999999999 89999987665 3577886531 0 1222322
Q ss_pred HH-HHHHHhcCcEEEEec----------eeC---CeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 218 AV-YDRIIARKVIYIVKG----------SFQ---DRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 218 ~L-~~~L~~~G~~~vs~t----------~l~---g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
++ ..-+...|..+.... .+. ...++|++++...+++++++.+++.|+++.+
T Consensus 334 ~L~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~ 398 (400)
T 3vax_A 334 TLKDLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKP 398 (400)
T ss_dssp HHHHHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC-------------------
T ss_pred HHhcCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhc
Confidence 22 222233444333221 011 1368999885666778999999999987653
No 268
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=98.58 E-value=1.3e-07 Score=100.88 Aligned_cols=220 Identities=15% Similarity=0.073 Sum_probs=134.3
Q ss_pred eeeeHHHH--Hhhc--CCCCCCeEEecCCCCCcccHHHHHH-HHHHHh-hCCCCcEE-EEeeCCccccc---ccCchhhh
Q psy13453 20 LIYESFKA--THSL--SGTPDQVRLSGLPDSEWLAYLTLRT-IYESFR-KSFLCPMC-SGYCGRTLHQD---IQSLNAPV 89 (764)
Q Consensus 20 ~~YSv~KA--a~~L--Gl~~~~v~~Vpvd~~~rmD~~aLe~-~I~~~~-~~G~~p~~-VatAGTT~~G~---iDpi~~ia 89 (764)
.||+..++ +..+ |... +.||++ ++.+|+++|++ +|++.. ..+..+-+ +.+.++ ++|. .+++++++
T Consensus 92 ~~~~~~~~~~~~~~~~g~~~---~~v~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~-~tG~~~~~~~l~~i~ 166 (356)
T 1v72_A 92 SHINNDECGAPEFFSNGAKL---MTVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQAT-EVGSIYTLDEIEAIG 166 (356)
T ss_dssp SHHHHSSTTHHHHHTTSCEE---EECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSC-TTSCCCCHHHHHHHH
T ss_pred cchhhhhchHHHHHhCCcEE---EEecCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCC-CCCccCCHHHHHHHH
Confidence 57777777 7777 8765 888886 58999999999 886421 11223444 344454 6999 77788777
Q ss_pred c-----CCCceecccccc--------c---c-----ceeeeecCCCc-c-cc-ccc-cccccC----Cc-ccCCC-Cccc
Q psy13453 90 S-----NGPLKVGGVLRR--------V---Y-----SSCLVPRGQKS-L-RT-TVL-FHFLFQ----HW-QIPLG-RRFR 138 (764)
Q Consensus 90 ~-----~~wlHVDa~l~~--------~---y-----~s~ll~rd~~~-l-~~-~~s-~~~d~~----d~-tle~S-Rr~~ 138 (764)
+ ++|+|+|++... . + ..++.+.-.+. . .+ .+- ...+.. .. ...++ ....
T Consensus 167 ~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~g~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (356)
T 1v72_A 167 DVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVLAAEAIVLFNTSLATEMSYRRKRAGHLSSKM 246 (356)
T ss_dssp HHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGGTCSSCEEEEESSGGGHHHHHHHHHHTTCCCSST
T ss_pred HHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccCCCcCccEEEEECHHHHhhHHHHhhccCchhhhH
Confidence 5 889999985310 0 0 00111110110 0 00 000 000000 00 00111 1112
Q ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHH
Q psy13453 139 ALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKA 218 (764)
Q Consensus 139 ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~ 218 (764)
.+....++..+..+.|.+++++..++++++.+.|++.+++++..++..+.+.+++. .+
T Consensus 247 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~----------------------~~ 304 (356)
T 1v72_A 247 RFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD----------------------SA 304 (356)
T ss_dssp HHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC----------------------HH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC----------------------HH
Confidence 23333455666556688888999999999999999989999987777777776541 15
Q ss_pred HHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 219 VYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 219 L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
+.++|.++|..+.... +. ..++|++ .+..+++++++.+++.|+++.++
T Consensus 305 ~~~~l~~~gi~v~~g~-~~-~~~iRi~-~~~~~~~~~i~~~~~~l~~~l~~ 352 (356)
T 1v72_A 305 MIDALLKAGFGFYHDR-WG-PNVVRFV-TSFATTAEDVDHLLNQVRLAADR 352 (356)
T ss_dssp HHHHHHHTTCBCBCSS-SS-TTEEEEE-CCTTCCHHHHHHHHHHHHHTC--
T ss_pred HHHHHHhcCeEEeccc-cC-CCeEEEE-ecCCCCHHHHHHHHHHHHHHHHh
Confidence 7778888887543222 22 5689996 66778999999999999877543
No 269
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=98.57 E-value=4.2e-07 Score=99.52 Aligned_cols=212 Identities=17% Similarity=0.089 Sum_probs=136.2
Q ss_pred eeeeHHHHHh----hc--CCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc---
Q psy13453 20 LIYESFKATH----SL--SGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS--- 90 (764)
Q Consensus 20 ~~YSv~KAa~----~L--Gl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~--- 90 (764)
.|.|+..+.. .. |... +.||+ +++|+++|++. +-+++.+.+++++|.+.|++++++
T Consensus 128 ~~~~~~~~~~~~~~~~~~g~~~---~~v~~-------~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~ 192 (416)
T 1qz9_A 128 NFPTDLYIAEGLADMLQQGYTL---RLVDS-------PEELPQAIDQD-----TAVVMLTHVNYKTGYMHDMQALTALSH 192 (416)
T ss_dssp SCHHHHHHHHHHHHHHCSSCEE---EEESS-------GGGHHHHCSTT-----EEEEEEESBCTTTCBBCCHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHhcCCceE---EEeCc-------HHHHHHHhCCC-----ceEEEEeccccCcccccCHHHHHHHHH
Confidence 4555555433 33 7654 77776 78888888542 224468889999999999999876
Q ss_pred --CCCceeccccc--------------------cc-----c-c-eeeeecCCC--cccccccc---c---ccc-CCc---
Q psy13453 91 --NGPLKVGGVLR--------------------RV-----Y-S-SCLVPRGQK--SLRTTVLF---H---FLF-QHW--- 129 (764)
Q Consensus 91 --~~wlHVDa~l~--------------------~~-----y-~-s~ll~rd~~--~l~~~~s~---~---~d~-~d~--- 129 (764)
++|+++|++.. ++ . + ++++.++.- .+...... . +++ .++
T Consensus 193 ~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~g~~~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~ 272 (416)
T 1qz9_A 193 ECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPS 272 (416)
T ss_dssp HHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSSTTCCCTTCCCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBC
T ss_pred HcCCEEEEEccccccCcCCChhhcCCCEEEecCcccCCCCCCCeEEEEECHHHHhccCCCccccCccccccCCCCccCCC
Confidence 89999999531 11 0 1 333333221 01100000 0 000 000
Q ss_pred ----ccC-CCCc-ccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcC-C--CeEEeCCC----CceeEEEEeecc
Q psy13453 130 ----QIP-LGRR-FRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQD-D--RFELVCPP----SMGLVCFRLKVR 196 (764)
Q Consensus 130 ----tle-~SRr-~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~-p--~~ell~~P----~l~iV~Fry~P~ 196 (764)
... ++.. .....+++++..+..+++.++.++..++++++.+.|++. | +++++.++ ..++++|++.
T Consensus 273 ~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-- 350 (416)
T 1qz9_A 273 NGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHP-- 350 (416)
T ss_dssp SSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECT--
T ss_pred cchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecC--
Confidence 111 1121 122356778888877889999999999999999999985 6 89987764 3567777642
Q ss_pred ccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 197 FWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 197 ~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
+ ..++.++|.++|... ...+..++|+++.++.+++++++.+++.|+++.++.
T Consensus 351 --------------~----~~~l~~~l~~~gi~~----~~~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~~ 402 (416)
T 1qz9_A 351 --------------E----GYAVIQALIDRGVIG----DYREPRIMRFGFTPLYTTFTEVWDAVQILGEILDRK 402 (416)
T ss_dssp --------------T----HHHHHHHHHTTTEEC----EEETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHHT
T ss_pred --------------C----HHHHHHHHHhCCcEe----ccCCCCeEEEeCcccCCCHHHHHHHHHHHHHHHhcc
Confidence 1 246888888888642 223456899988766889999999999999887653
No 270
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=98.57 E-value=3.9e-07 Score=98.26 Aligned_cols=216 Identities=12% Similarity=0.017 Sum_probs=135.3
Q ss_pred HHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceeccc
Q psy13453 25 FKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGGV 99 (764)
Q Consensus 25 ~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa~ 99 (764)
.+.+...|... +.||++.++.+|+++|++++++ ++-+++.+.+++++|.+.|++++++ ++++++|+.
T Consensus 111 ~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~ 182 (376)
T 3f0h_A 111 VQLCEIHEIPY---VALKLEHGKKLTKEKLYEYDNQ-----NFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCV 182 (376)
T ss_dssp HHHHHHTTCCE---EEEECCTTCCCCHHHHHTTTTS-----CCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECT
T ss_pred HHHHHHcCCce---EEEeCCCCCCCCHHHHHHhhcc-----CceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcC
Confidence 35677778776 9999999999999999987643 2234466778899999999999876 899999985
Q ss_pred ccc---cc-----c-eeeeecCCCccccc----c-ccccc-------------cCCcc------c-CCCC-cccH---HH
Q psy13453 100 LRR---VY-----S-SCLVPRGQKSLRTT----V-LFHFL-------------FQHWQ------I-PLGR-RFRA---LK 141 (764)
Q Consensus 100 l~~---~y-----~-s~ll~rd~~~l~~~----~-s~~~d-------------~~d~t------l-e~SR-r~~A---Lk 141 (764)
... .+ + .+++..-.+.+..- + ....+ +.++. . .++. .... ..
T Consensus 183 ~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 262 (376)
T 3f0h_A 183 SAFLADPFNMNECGADVMITGSQKVLACPPGISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQ 262 (376)
T ss_dssp TTTTTSCCCHHHHTCSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHH
T ss_pred ccccCccccccccCccEEEecCcccccCCCceEEEEECHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHH
Confidence 311 00 0 01111111111100 0 00000 00000 0 0111 1122 45
Q ss_pred HHHHHHHccHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCce-eEEEEeeccccccccccccCccCCccHHHHHH
Q psy13453 142 LWMTLRSYGLK-GLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMG-LVCFRLKVRFWDKLDNLFGTISFGDNDLNKAV 219 (764)
Q Consensus 142 lWatL~~lG~e-Gy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~-iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L 219 (764)
+.+++..+..+ |+.++.++..++++++.+.|++. ++++..++... +++|. |++ .+ ..++
T Consensus 263 ~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~--~~~--------------~~--~~~l 323 (376)
T 3f0h_A 263 INERLKEIKKHGGADAEVARIASQAADFRAKIKDL-PFELVSESPANGVTSVH--PTT--------------AN--AYDI 323 (376)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS-SEEECCSSBBTTEEEEE--ESS--------------SC--HHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCccCccccCceEEEEe--CCC--------------CC--HHHH
Confidence 67777777777 79999999999999999999987 68877654333 34443 221 11 2468
Q ss_pred HHHHHhc-CcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 220 YDRIIAR-KVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 220 ~~~L~~~-G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
.++|.++ |..+.......+..++|+++.. .+++++++++++.|+++.+
T Consensus 324 ~~~l~~~~gi~v~~g~~~~~~~~lRis~~~-~~t~e~i~~~~~~l~~~l~ 372 (376)
T 3f0h_A 324 FLKLKDEYGIWICPNGGEMKDTIFRVGHIG-ALTHEDNTTLVNAFKDLQK 372 (376)
T ss_dssp HHHHHHHSSEECEECCGGGTTTCEEEECCS-SCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCEEEecCccccCCCEEEEecCC-CCCHHHHHHHHHHHHHHHH
Confidence 8888888 8754443222345689997544 4689999999999988753
No 271
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=98.57 E-value=6.6e-07 Score=98.93 Aligned_cols=164 Identities=16% Similarity=0.067 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
..+..++.++++++++ .. ...+||+|||+||..|+.+||... + ++-+|+....-
T Consensus 91 ~~~~~~l~~~l~~~~~-~~---------~~v~~~~~g~ea~~~al~~ar~~~-~---------------~~~vi~~~~~y 144 (424)
T 2e7u_A 91 SPLEVALAKKVKRAYP-FV---------DLVRFVNSGTEATMSALRLARGYT-G---------------RPYIVKFRGNY 144 (424)
T ss_dssp CHHHHHHHHHHHHHCT-TC---------CEEEEESSHHHHHHHHHHHHHHHH-C---------------CCEEEEETTCC
T ss_pred CHHHHHHHHHHHHhCC-CC---------CEEEEeCCHHHHHHHHHHHHHHhh-C---------------CCEEEEECCCc
Confidence 4556667778888875 22 257899999999999999887532 1 12245555555
Q ss_pred chhHHHHHH-------------hCCC------ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc
Q psy13453 641 NSSVEKSAI-------------IGDV------PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD 701 (764)
Q Consensus 641 H~Sv~kAa~-------------~lGl------~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD 701 (764)
|....-+.. ..|+ .+..+|. .|+++|+++|++.. ..+.+|+++--...+|.+-
T Consensus 145 hg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~ 216 (424)
T 2e7u_A 145 HGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-----NDPEGLREVLKRRG---EEIAAIIFEPVVGNAGVLV 216 (424)
T ss_dssp CCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-----TCHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBC
T ss_pred CCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-----CCHHHHHHHHHhCC---CCEEEEEEeCCCCCCCCcC
Confidence 543222211 1232 2444543 38999999997531 1244566555444589877
Q ss_pred c----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 702 N----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 702 p----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
| +++|+++ ++||++|++|.+|+++ ...+.+.....|+ ..|-+ +++|+++..+.+|++
T Consensus 217 ~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~--s~sK~l~~G~~~G~~ 277 (424)
T 2e7u_A 217 PTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFGGATELLGL-KPDLV--TLGKILGGGLPAAAY 277 (424)
T ss_dssp CCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTC-CCSEE--EECGGGGTTSSCEEE
T ss_pred CCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchhHHHHHhCC-Ccchh--hhhhhhhCCcceEEE
Confidence 6 9999999 9999999999999975 3322222222243 35755 557999875556654
No 272
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=98.55 E-value=1.1e-07 Score=104.97 Aligned_cols=205 Identities=9% Similarity=-0.075 Sum_probs=131.7
Q ss_pred eEEecCC--CCCc-ccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc-cCchhhhcCCCceecccc-------------
Q psy13453 38 VRLSGLP--DSEW-LAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI-QSLNAPVSNGPLKVGGVL------------- 100 (764)
Q Consensus 38 v~~Vpvd--~~~r-mD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i-Dpi~~ia~~~wlHVDa~l------------- 100 (764)
|..||++ +.|+ .|+++++++|++++ -++..+--.|.+|++ .||++++.++++||||.-
T Consensus 140 v~~v~~~~~~~G~~~~~~~~~~~l~~~t-----~lV~~~h~et~tG~~i~pi~~i~~g~~~~vDa~qs~g~~pidv~~~~ 214 (386)
T 3qm2_A 140 PQIIDAKITVDGKRAVKPMREWQLSDNA-----AYLHYCPNETIDGIAIDETPDFGPEVVVTADFSSTILSAPLDVSRYG 214 (386)
T ss_dssp EEEEECEEEETTEEEECCGGGCCCCTTC-----SCEEECSEETTTTEECCCCCCCCTTCCEEEECTTTTTSSCCCGGGCS
T ss_pred eEEEecCcccCCCCCCchHHHhhcCCCC-----cEEEEECCcCCcCEecCchhhhcCCCEEEEEcccccCCCCCCccccC
Confidence 6999999 6776 89998888776532 234466778899995 999999888999999931
Q ss_pred -----cc----ccc-eeeeecCCCccccccccccccCCcc---cCCCC-----cccHHHHHHHHHHccHH-HHHHHHHHH
Q psy13453 101 -----RR----VYS-SCLVPRGQKSLRTTVLFHFLFQHWQ---IPLGR-----RFRALKLWMTLRSYGLK-GLQAYLRKH 161 (764)
Q Consensus 101 -----~~----~y~-s~ll~rd~~~l~~~~s~~~d~~d~t---le~SR-----r~~ALklWatL~~lG~e-Gy~~~i~~~ 161 (764)
.| +.+ ++++.|++- +...-...+.+.+|. -.+.| -..+..+-++++.+-.+ |+.++.++.
T Consensus 215 ~~~~s~hK~lGP~G~g~l~v~~~~-~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~ 293 (386)
T 3qm2_A 215 VIYAGAQKNIGPAGLTLVIVREDL-LGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKIN 293 (386)
T ss_dssp EEEEETTTTTCCTTEEEEEEEGGG-CSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred EEEEecccccCCCccEEEEECHHH-HhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 11 122 345554322 111000011111111 01222 12344667788888777 899999999
Q ss_pred HHHHHHHHHHHhcCCCe-EEeCCCC---ceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeC
Q psy13453 162 ISLAKKFADLVEQDDRF-ELVCPPS---MGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQ 237 (764)
Q Consensus 162 i~lA~~l~~~I~~~p~~-ell~~P~---l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~ 237 (764)
.++++++.+.|++. ++ ....++. ..+++|++... .++..+..+|.+.|.+.. ...+
T Consensus 294 ~~l~~~l~~~l~~~-~~~~~~~~~~~rs~~iv~f~~~~~-----------------~~~~~~~~~L~~~gI~~~--~g~~ 353 (386)
T 3qm2_A 294 QQKAELLYGVIDNS-DFYRNDVAQANRSRMNVPFQLADN-----------------TLDKVFLEESFAAGLHAL--KGHR 353 (386)
T ss_dssp HHHHHHHHHHHHTC-SSEECCBCGGGBCSSEEEEEESSG-----------------GGHHHHHHHHHHTTEECC--BCCT
T ss_pred HHHHHHHHHHHHHC-CCcccCCCHHHcCceEEEEECCCc-----------------cccHHHHHHHHHCCCEEe--CCCC
Confidence 99999999999998 55 3333332 35899987411 122456677888886432 2222
Q ss_pred CeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 238 DRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 238 g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
....+|+++ ...+|+++|+.+++.|+++.++
T Consensus 354 ~~~~iRiS~-~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 354 VVGGMRASI-YNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp TTCSEEEEC-CTTSCHHHHHHHHHHHHHHHHH
T ss_pred CcCeEEEEc-CCCCCHHHHHHHHHHHHHHHHh
Confidence 223499985 5667899999999999998754
No 273
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=98.51 E-value=2.9e-07 Score=101.38 Aligned_cols=216 Identities=11% Similarity=0.018 Sum_probs=134.9
Q ss_pred HHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc--CCCceecccc----
Q psy13453 27 ATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS--NGPLKVGGVL---- 100 (764)
Q Consensus 27 Aa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~--~~wlHVDa~l---- 100 (764)
.|+-.|.. ++.+|++.++..+++.++.+|+++ +-++..+--.|.+|++-|+ +++ ++++||||.-
T Consensus 121 ~a~~~G~~---~~~~~~~~~~~~~~~~~~~~i~~~-----t~lV~~~h~et~tG~~~pi--i~~~~~~~~~vD~~q~~g~ 190 (377)
T 3e77_A 121 EAKKFGTI---NIVHPKLGSYTKIPDPSTWNLNPD-----ASYVYYCANETVHGVEFDF--IPDVKGAVLVCDMSSNFLS 190 (377)
T ss_dssp HHTTTSEE---EECSCCCSSSCSCCCGGGCCCCTT-----CSCEEEESEETTTTEECSS--CCCCTTCCEEEECTTTTTS
T ss_pred HHHHhCCc---eEEeccCCCcCCCCChHHhccCCC-----ccEEEEeCccCchheEchh--hhccCCCEEEEEcccccCC
Confidence 34444543 366788877788888777666543 2244466777899999999 555 7899999931
Q ss_pred --------------ccc----cc-eeeeecCCCccccccccccccCCccc---CCCCc-----ccHHHHHHHHHHccHH-
Q psy13453 101 --------------RRV----YS-SCLVPRGQKSLRTTVLFHFLFQHWQI---PLGRR-----FRALKLWMTLRSYGLK- 152 (764)
Q Consensus 101 --------------~~~----y~-s~ll~rd~~~l~~~~s~~~d~~d~tl---e~SRr-----~~ALklWatL~~lG~e- 152 (764)
.|+ .+ ++++.|++- +...-...+.+.+|.. ..+|. +.+..+-++++++=.+
T Consensus 191 ~~id~~~~~~~~~s~~K~~gp~G~g~l~~~~~~-l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~G 269 (377)
T 3e77_A 191 KPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDL-LGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNG 269 (377)
T ss_dssp SCCCGGGCSEEEEEGGGTTSCTTCEEEEEETTS-CSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTT
T ss_pred CCCchhhcCEEEEecccccCCCccEEEEEcHHH-HhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHcc
Confidence 111 11 355555432 2111000112222211 12221 1233566778877777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEeC-CCC--c-eeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCc
Q psy13453 153 GLQAYLRKHISLAKKFADLVEQDDRFELVC-PPS--M-GLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKV 228 (764)
Q Consensus 153 Gy~~~i~~~i~lA~~l~~~I~~~p~~ell~-~P~--l-~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~ 228 (764)
|+.++.++..++++++.+.|+++|++++.. +++ . .+++|++.. .. ...+++..+.+.+.+.|.
T Consensus 270 G~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~--~~-----------~~~~~~~~~l~~l~~~Gi 336 (377)
T 3e77_A 270 GAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGN--AK-----------GDDALEKRFLDKALELNM 336 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESS--TT-----------CCHHHHHHHHHHHHHTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCC--CC-----------CchhHHHHHHHHHHHCCc
Confidence 899999999999999999999999998643 222 3 369998741 00 012355567788888887
Q ss_pred EEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 229 IYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 229 ~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
+... ..+....+|+++.+ .+++++|+.+++.|+++.++
T Consensus 337 ~~~~--g~~~~g~iRiS~~~-~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 337 LSLK--GHRSVGGIRASLYN-AVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp ESCB--CCTTTCSEEEECCT-TSCHHHHHHHHHHHHHHHHH
T ss_pred EEeC--CCCcCCEEEEECCC-CCCHHHHHHHHHHHHHHHHH
Confidence 4322 22223459998654 67899999999999988754
No 274
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=98.50 E-value=9.4e-07 Score=94.20 Aligned_cols=216 Identities=9% Similarity=-0.024 Sum_probs=129.8
Q ss_pred eeeeHHH--HHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHh-hCCCCcEE-EEeeCCcccccccC---chhhhc--
Q psy13453 20 LIYESFK--ATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFR-KSFLCPMC-SGYCGRTLHQDIQS---LNAPVS-- 90 (764)
Q Consensus 20 ~~YSv~K--Aa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~-~~G~~p~~-VatAGTT~~G~iDp---i~~ia~-- 90 (764)
.|+++.+ +++..|... +.||++ ++.+|+++|+++|++.. ..|..+-+ +.+.+ +++|.+-| ++++.+
T Consensus 99 ~~~~~~~~~~~~~~g~~~---~~v~~~-~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~ 173 (359)
T 1svv_A 99 GHISTHETGAIEATGHKV---VTAPCP-DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDISASC 173 (359)
T ss_dssp SHHHHSSTTHHHHTTCCE---EEECCT-TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHHHH
T ss_pred chHHHHHHHHHhcCCCee---EEEeCC-CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHHHHH
Confidence 4666666 477888865 999987 78999999999998741 12222434 34445 58999988 666654
Q ss_pred ---CCCceecccc-----ccc-c-c----------eeeeecCCCc-ccc--cccccccc----------CCcccCCCCcc
Q psy13453 91 ---NGPLKVGGVL-----RRV-Y-S----------SCLVPRGQKS-LRT--TVLFHFLF----------QHWQIPLGRRF 137 (764)
Q Consensus 91 ---~~wlHVDa~l-----~~~-y-~----------s~ll~rd~~~-l~~--~~s~~~d~----------~d~tle~SRr~ 137 (764)
++|+|+|++. ... . . .+.+...+-. ... .+....+. ..++.. ...
T Consensus 174 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~--~~~ 251 (359)
T 1svv_A 174 KEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFGEALIILNDALKPNARHLIKQRGALMA--KGW 251 (359)
T ss_dssp HHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTCSSCEEEEECSGGGCTTHHHHHHHTTCCCT--TTH
T ss_pred HHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCCCCceEEEEEcccHHHHHHHHHhcCCcccc--cch
Confidence 8999999964 100 0 0 0111000000 000 00000000 111111 111
Q ss_pred cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHH
Q psy13453 138 RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNK 217 (764)
Q Consensus 138 ~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~ 217 (764)
.....++ ..+..+++.++.++..++++++.+.| +.++++++.+...+.+.++.. .
T Consensus 252 ~~~~~~~--~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~----------------------~ 306 (359)
T 1svv_A 252 LLGIQFE--VLMKDNLFFELGAHSNKMAAILKAGL-EACGIRLAWPSASNQLFPILE----------------------N 306 (359)
T ss_dssp HHHHHHH--HHTSTTHHHHHHHHHHHHHHHHHHHH-HHTTCCBSSCCSSSEECBEEE----------------------H
T ss_pred hhHHHHH--HHHhhhhHHHHHHHHHHHHHHHHHHh-ccCCeEEccCCccceEEEEcC----------------------H
Confidence 1111122 23555678899999999999999999 568998876666665555321 2
Q ss_pred HHHHHHHhc-CcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 218 AVYDRIIAR-KVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 218 ~L~~~L~~~-G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
++.++|.++ |..+.... -.+..++|++ .+..+++++++.+++.|+++.++
T Consensus 307 ~~~~~l~~~~gi~v~~~~-~~~~~~iRi~-~~~~~~~~~i~~~~~~l~~~~~~ 357 (359)
T 1svv_A 307 TMIAELNNDFDMYTVEPL-KDGTCIMRLC-TSWATEEKECHRFVEVLKRLVAS 357 (359)
T ss_dssp HHHHHHTTTEECEEEEEE-TTTEEEEEEE-CCTTCCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHhcCEEEEecc-cCCCceEEEE-ccCcCCHHHHHHHHHHHHHHHhc
Confidence 678888888 88663221 2356789997 55567899999999999887543
No 275
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=98.49 E-value=7.6e-07 Score=96.66 Aligned_cols=224 Identities=11% Similarity=0.076 Sum_probs=138.2
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC--CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc---cCchhhhc----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD--SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI---QSLNAPVS---- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~--~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i---Dpi~~ia~---- 90 (764)
.|.++.++++..|... +.||+++ ++.+|+++|+++|++. +-+++-+.++.++|.+ ++++++++
T Consensus 123 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~d~~~l~~~l~~~-----~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~ 194 (388)
T 1j32_A 123 FWVSYPEMVKLAEGTP---VILPTTVETQFKVSPEQIRQAITPK-----TKLLVFNTPSNPTGMVYTPDEVRAIAQVAVE 194 (388)
T ss_dssp CCTHHHHHHHHTTCEE---EEECCCGGGTTCCCHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CChhHHHHHHHcCCEE---EEecCCcccCCCCCHHHHHHhcCcC-----ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 5778899999999866 9999985 6789999999999642 2244456688899998 66777765
Q ss_pred -CCCceeccccccc-c-----ce------------eeeecCCCccc-cccccccccC---------CcccCCCCcccHHH
Q psy13453 91 -NGPLKVGGVLRRV-Y-----SS------------CLVPRGQKSLR-TTVLFHFLFQ---------HWQIPLGRRFRALK 141 (764)
Q Consensus 91 -~~wlHVDa~l~~~-y-----~s------------~ll~rd~~~l~-~~~s~~~d~~---------d~tle~SRr~~ALk 141 (764)
++|+++|...... + .+ +++..-.+.+- ..+...+-+. ...-.++-....+.
T Consensus 195 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~ 274 (388)
T 1j32_A 195 AGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAATKIQGHSTSNVCTFA 274 (388)
T ss_dssp HTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHHHHHHHHHHHHTTTCSCCHHH
T ss_pred cCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHHHHHHHHHHHhhcccCCCHHH
Confidence 8999999864211 0 00 11111111110 0000000000 00001111233455
Q ss_pred HHHHHHHc--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHH
Q psy13453 142 LWMTLRSY--GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAV 219 (764)
Q Consensus 142 lWatL~~l--G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L 219 (764)
.++++..+ +.+.+.++.++..+.++++.+.|++.|+++++. |.-+.++|-..+.. +.+ ..++
T Consensus 275 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~~~~~~~~~~~~-------------~~~--~~~~ 338 (388)
T 1j32_A 275 QYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPK-PDGAFYMFPSIAKT-------------GRS--SLDF 338 (388)
T ss_dssp HHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCC-CCBTTEECCBCGGG-------------TCC--HHHH
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCcccC-CCeeEEEEEecCCC-------------CCC--HHHH
Confidence 55544443 567788889999999999999999988988654 44444433211100 011 2467
Q ss_pred HHHHHh-cCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 220 YDRIIA-RKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 220 ~~~L~~-~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
.++|.+ .|..+..........++|+++. +++++++++++.|+++.+++
T Consensus 339 ~~~l~~~~gi~v~~g~~~~~~~~iRis~~---~~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 339 CSELLDQHQVATVPGAAFGADDCIRLSYA---TDLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp HHHHHHHHCEECEEGGGGTCTTBEEEECC---SCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCEEEeChhhhCCCCcEEEEec---CCHHHHHHHHHHHHHHHHHh
Confidence 788876 6876554433333468999875 57999999999998887654
No 276
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=98.48 E-value=6.7e-07 Score=98.69 Aligned_cols=223 Identities=8% Similarity=-0.018 Sum_probs=131.0
Q ss_pred eeeeHHHHHhh----cCCCCCCeEEecCCC-CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc----
Q psy13453 20 LIYESFKATHS----LSGTPDQVRLSGLPD-SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS---- 90 (764)
Q Consensus 20 ~~YSv~KAa~~----LGl~~~~v~~Vpvd~-~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~---- 90 (764)
.|+|+.++... .|... +.||+++ ++++|+++|+++|++. +-+++.+.+++++|.+.|++++++
T Consensus 132 ~h~s~~~~~~~~~~~~g~~v---~~v~~~~~~~~~d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~~~~i~~l~~~ 203 (432)
T 3a9z_A 132 EHDSIRLPLEHLVEDQVAEV---TFVPVSKVNGQVEVEDILAAVRPT-----TCLVTIMLANNETGVIMPISEISRRIKA 203 (432)
T ss_dssp CCHHHHHHHHHHHHTTSCEE---EEECCCTTTSSCCHHHHHHTCCTT-----EEEEECCSBCTTTCBBCCHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHhcCcEE---EEEecCcccCCcCHHHHHHhccCC-----ceEEEEECcccCcccccCHHHHHHHHHh
Confidence 68888776654 46655 8999986 8899999999998642 224468889999999999999875
Q ss_pred -C----------CCceeccccc--------------------cc----cceeeeecCCCccccccccccccCCc----cc
Q psy13453 91 -N----------GPLKVGGVLR--------------------RV----YSSCLVPRGQKSLRTTVLFHFLFQHW----QI 131 (764)
Q Consensus 91 -~----------~wlHVDa~l~--------------------~~----y~s~ll~rd~~~l~~~~s~~~d~~d~----tl 131 (764)
+ +|+|+|++.. ++ .+++++.++..... .+. ..+..+ ..
T Consensus 204 ~~~~~~~~~~~~~~livDea~~~~~~~~~~~~~~~d~~~~s~~K~~g~~~G~~~~~~~~~~~-~~~--~~~~~~~~~~~~ 280 (432)
T 3a9z_A 204 LNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPRIGALYVRGVGKLT-PLY--PMLFGGGQERNF 280 (432)
T ss_dssp HHHHHHHHTCCCCEEEEECTTTTTTSCCCHHHHCCSEEEEEGGGTTCCSCEEEEETTBTTTB-CCC--CSCCSSCGGGGT
T ss_pred cCcccccccCCceEEEEEchhhhCCcccChhhcCCCEEEEehhHhcCCcceEEEEccccccC-CcC--ceeecCCccccc
Confidence 6 9999999531 11 01334333221000 000 000000 00
Q ss_pred -CCCCcccHH-HHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe--CCC----C-ceeEEEEeecccccccc
Q psy13453 132 -PLGRRFRAL-KLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELV--CPP----S-MGLVCFRLKVRFWDKLD 202 (764)
Q Consensus 132 -e~SRr~~AL-klWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell--~~P----~-l~iV~Fry~P~~~~~~~ 202 (764)
.++-...++ .+.+++..+ .+++.++.++..++++++.+.|++.+++++. .++ . -++++|.+...+
T Consensus 281 ~~~~~~~~~~~a~~aal~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 354 (432)
T 3a9z_A 281 RPGTENTPMIAGLGKAADLV-SENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQ----- 354 (432)
T ss_dssp SCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTT-----
T ss_pred cCCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCC-----
Confidence 011111122 334445544 5688999999999999999999987665443 331 1 237888764211
Q ss_pred ccccCccCCccHHHHHHHHHHH----hcCcEEEEe-----------cee---CCeeEEEEeccCCCCCHHHHHHHHHHHH
Q psy13453 203 NLFGTISFGDNDLNKAVYDRII----ARKVIYIVK-----------GSF---QDRLFMRFAICSSQTEESDVQLGWNEIR 264 (764)
Q Consensus 203 ~~~~~~~~~~d~~n~~L~~~L~----~~G~~~vs~-----------t~l---~g~~~LRi~v~np~Tt~e~i~~~l~~l~ 264 (764)
.+ ...+.+++. +.|..+... ..+ .+..++|+++. ..+++++++.+++.|+
T Consensus 355 ---------~~--~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~-~~~t~eei~~~~~~l~ 422 (432)
T 3a9z_A 355 ---------LR--GYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVG-RSTTRAEVDLIVQDLK 422 (432)
T ss_dssp ---------CC--HHHHHHHCSSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECC-TTCCHHHHHHHHHHHH
T ss_pred ---------Cc--HHHHHHHhcCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcC-CCCCHHHHHHHHHHHH
Confidence 00 012222221 111100000 000 01258999765 5678999999999999
Q ss_pred HHHHHHH
Q psy13453 265 TATEEVL 271 (764)
Q Consensus 265 ~~~~~i~ 271 (764)
++.+++.
T Consensus 423 ~~~~~~~ 429 (432)
T 3a9z_A 423 QAVNQLE 429 (432)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9877654
No 277
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=98.47 E-value=8.3e-07 Score=96.08 Aligned_cols=222 Identities=7% Similarity=-0.014 Sum_probs=137.6
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC---CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc---cCchhhhc---
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP---DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI---QSLNAPVS--- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd---~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i---Dpi~~ia~--- 90 (764)
.|.++..++..+|... +.+|++ .++++|+++|+++|++. ++-+++-+.++.++|.+ ++++++++
T Consensus 118 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~d~~~l~~~l~~~----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~ 190 (391)
T 3dzz_A 118 VYNMFYSVIEGNGRRV---ISSDLIYENSKYSVNWADLEEKLATP----SVRMMVFCNPHNPIGYAWSEEEVKRIAELCA 190 (391)
T ss_dssp CCHHHHHHHHHTTCEE---EECCCEEETTEEECCHHHHHHHHTST----TEEEEEEESSBTTTTBCCCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCEE---EEeeeeecCCceeecHHHHHHHHhcc----CceEEEEECCCCCCCcccCHHHHHHHHHHHH
Confidence 5778889999999877 899985 34469999999999731 12244457789999999 88888875
Q ss_pred --CCCceeccccccc-c-----ce------------eeeecCCCcc--cc---ccccc--cc----cCC----cccCCCC
Q psy13453 91 --NGPLKVGGVLRRV-Y-----SS------------CLVPRGQKSL--RT---TVLFH--FL----FQH----WQIPLGR 135 (764)
Q Consensus 91 --~~wlHVDa~l~~~-y-----~s------------~ll~rd~~~l--~~---~~s~~--~d----~~d----~tle~SR 135 (764)
++++++|.+.... + .+ +++..-.+.+ .+ .+-.. .+ +.. .+.-+.-
T Consensus 191 ~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (391)
T 3dzz_A 191 KHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESFFLAGIGEPN 270 (391)
T ss_dssp HTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHHHHHTCSSCC
T ss_pred HCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHHHhhccCCCC
Confidence 8999999964211 0 00 1111101110 00 00000 00 000 0111111
Q ss_pred cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEeCCCCceeEE-EEeeccccccccccccCccCCcc
Q psy13453 136 RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQ-DDRFELVCPPSMGLVC-FRLKVRFWDKLDNLFGTISFGDN 213 (764)
Q Consensus 136 r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~-~p~~ell~~P~l~iV~-Fry~P~~~~~~~~~~~~~~~~~d 213 (764)
......+.+++.. +.+.+.++.++..+.++++.+.|++ .|++++.. |.-+.+. +++... ..+
T Consensus 271 ~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~--------------~~~ 334 (391)
T 3dzz_A 271 LLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLD-SNASYLAWVDISAL--------------GMN 334 (391)
T ss_dssp TTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECC-CCBSSEEEEECGGG--------------CSC
T ss_pred HHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEec-cCceEEEEEehhhc--------------CCC
Confidence 2222333444544 6677889999999999999999999 89999765 4444444 444211 011
Q ss_pred HHHHHHHHHHH-hcCcEEEEecee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 214 DLNKAVYDRII-ARKVIYIVKGSF--QDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 214 ~~n~~L~~~L~-~~G~~~vs~t~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
..++.++|. +.|..+...... .+..++|+++. +++++++.+++.|.++.++
T Consensus 335 --~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~i~~~l~~l~~~l~~ 388 (391)
T 3dzz_A 335 --AEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA---CPKELVIDGMQRLKQGVLN 388 (391)
T ss_dssp --HHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC---SCHHHHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHHHHHHH
Confidence 246788885 788765543333 23578999877 5789999999999887654
No 278
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=98.44 E-value=2.7e-06 Score=91.52 Aligned_cols=214 Identities=9% Similarity=0.018 Sum_probs=135.1
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc---cCchhhhc----C-
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI---QSLNAPVS----N- 91 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i---Dpi~~ia~----~- 91 (764)
.|.++..++..+|... +.||+++++.+|+++|+++|++. ++-+++-+.++.++|.+ +++.++++ +
T Consensus 118 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~l~~~----~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~ 190 (367)
T 3euc_A 118 GFVMYAMSAQFAGLEF---VGVPLRADFTLDRGAMLAAMAEH----QPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSV 190 (367)
T ss_dssp CSCCSCHHHHTTTCEE---EEEECCTTSCCCHHHHHHHHHHH----CCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTS
T ss_pred CHHHHHHHHHHcCCeE---EEecCCCCCCCCHHHHHHHhhcc----CCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcC
Confidence 4567778889999877 99999999999999999999873 12245456788999998 55666643 3
Q ss_pred --CCceecccccccc-----------ce-eeeecCCCcccccccccc-----c----cCCcccCCCCcccHHHHHHHHHH
Q psy13453 92 --GPLKVGGVLRRVY-----------SS-CLVPRGQKSLRTTVLFHF-----L----FQHWQIPLGRRFRALKLWMTLRS 148 (764)
Q Consensus 92 --~wlHVDa~l~~~y-----------~s-~ll~rd~~~l~~~~s~~~-----d----~~d~tle~SRr~~ALklWatL~~ 148 (764)
+++++|.+..... .. +++..-.+.....+...+ + +....... ....+..+++...
T Consensus 191 ~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~ 268 (367)
T 3euc_A 191 CRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKLGLAGIRLGYVAGDPQWLEQLDKVRPPY--NVNVLTEATALFA 268 (367)
T ss_dssp CBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCTTSCSCCEEEEEECHHHHHHHGGGCCSS--CCCHHHHHHHHHH
T ss_pred CCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhhcccccCceeeeeCHHHHHHHHHhCCCC--CCCHHHHHHHHHH
Confidence 8999998642110 00 111111111110000000 0 00000001 1334444444333
Q ss_pred cc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcC
Q psy13453 149 YG-LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARK 227 (764)
Q Consensus 149 lG-~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G 227 (764)
+- .+.+.++.++..++++++.+.+++.|++++ .++.-+.+.+++. + ..++.++|.+.|
T Consensus 269 l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~-~~~~~~~~~~~~~------------------~--~~~l~~~l~~~g 327 (367)
T 3euc_A 269 LEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTV-FPSAANFLLARVP------------------D--AAQTFDRLLARK 327 (367)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCEE-CCCSSSEEEEECS------------------C--HHHHHHHHHTTT
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEE-CCCCCeEEEEECC------------------C--HHHHHHHHHHCC
Confidence 32 566788999999999999999999999994 4555555655441 0 246788888899
Q ss_pred cEEEEecee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 228 VIYIVKGSF--QDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 228 ~~~vs~t~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
..+...... .+..++|+++. ++++++.+++.|+++.
T Consensus 328 i~v~~~~~~~~~~~~~iRis~~----~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 328 VLIKNVSKMHPLLANCLRVTVS----TPEENAQFLEAFAASL 365 (367)
T ss_dssp EECEECGGGCGGGTTEEEEECC----CHHHHHHHHHHHHHHT
T ss_pred eEEEECCccCCCCCCEEEEecC----CHHHHHHHHHHHHHHh
Confidence 865543332 23468999865 7999999999998763
No 279
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=98.44 E-value=1.5e-06 Score=93.49 Aligned_cols=216 Identities=10% Similarity=0.059 Sum_probs=130.6
Q ss_pred eee--HHHHHhhcCCCCCCeEEecCCC--CC--cccHHHHHHHHHHHhhCCCCcEEEEeeCCccccc-ccCchhhhcCCC
Q psy13453 21 IYE--SFKATHSLSGTPDQVRLSGLPD--SE--WLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQD-IQSLNAPVSNGP 93 (764)
Q Consensus 21 ~YS--v~KAa~~LGl~~~~v~~Vpvd~--~~--rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~-iDpi~~ia~~~w 93 (764)
+|+ +...++.+| .. +.||++. ++ ..|.++++ |++ ++-+++-+.+++++|. ++||+++ .++|
T Consensus 102 ~~~~~~~~~~~~~g-~~---~~v~~~~~~~~~~~~~~~~~~--i~~-----~t~~v~~~~~~n~tG~~~~~l~~i-~~~~ 169 (362)
T 2c0r_A 102 SWASKALKEAKLIG-DT---HVAASSEASNYMTLPKLQEIQ--LQD-----NAAYLHLTSNETIEGAQFKAFPDT-GSVP 169 (362)
T ss_dssp HHHHHHHHHHHHHS-CE---EEEEECGGGTTCSCCCGGGCC--CCT-----TEEEEEEESEETTTTEECSSCCCC-TTSC
T ss_pred cHhHHHHHHHHHhC-Ce---EEEecccccccccCCCHHHcc--cCC-----CcCEEEEeCCcCccceeccccccc-CCCE
Confidence 455 346777788 66 8899872 23 35666554 422 2223456777999999 5999999 7899
Q ss_pred ceeccccc------------------cc-c---c-eeeeecCCCccccccccccccCCc-------ccCCCC-cccHHHH
Q psy13453 94 LKVGGVLR------------------RV-Y---S-SCLVPRGQKSLRTTVLFHFLFQHW-------QIPLGR-RFRALKL 142 (764)
Q Consensus 94 lHVDa~l~------------------~~-y---~-s~ll~rd~~~l~~~~s~~~d~~d~-------tle~SR-r~~ALkl 142 (764)
+|||++.. ++ | + ++++.+.. ...........+.++ ...++- ......+
T Consensus 170 vivD~a~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~ 248 (362)
T 2c0r_A 170 LIGDMSSDILSRPFDLNQFGLVYAGAQKNLGPSGVTVVIVRED-LVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMV 248 (362)
T ss_dssp EEEECTTTTTSSCCCGGGCSEEEEETTTTTCCSSCEEEEEEGG-GSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHH
T ss_pred EEEEChhhccCCccchhHCcEEEEeccccccCcCcEEEEEcHH-HHhhccccCchHHhHHHHhhccCcCCCchHHHHHHH
Confidence 99999521 11 1 1 23333221 110000000000100 111222 1223455
Q ss_pred HHHHHHccHH-HHHHHHHHHHHHHHHHHHHHhcCCCe-EEeCCC---CceeEEEEeeccccccccccccCccCCccHHHH
Q psy13453 143 WMTLRSYGLK-GLQAYLRKHISLAKKFADLVEQDDRF-ELVCPP---SMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNK 217 (764)
Q Consensus 143 WatL~~lG~e-Gy~~~i~~~i~lA~~l~~~I~~~p~~-ell~~P---~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~ 217 (764)
.++++.+-.+ |+.++.++..++++++.+.|++.+++ ++..++ ...+++|++.. ..-..
T Consensus 249 ~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~ 311 (362)
T 2c0r_A 249 NEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLAS-----------------EELEK 311 (362)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSC-----------------HHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCC-----------------cchHH
Confidence 6667666555 89999999999999999999998656 876543 34567776521 11235
Q ss_pred HHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 218 AVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 218 ~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
++.++|.+.|.+... .......+|+++.+.+ ++++++.+++.|+++.++
T Consensus 312 ~~~~~L~~~gi~~~~--g~~~~~~iRis~~~~~-~~e~i~~l~~~l~~~~~~ 360 (362)
T 2c0r_A 312 EFVKASEQEGFVGLK--GHRSVGGLRASIYNAV-PYESCEALVQFMEHFKRS 360 (362)
T ss_dssp HHHHHHHHTTEESCB--CCTTTCSEEEECCTTS-CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCeecc--CCCCCCEEEEECCCCC-CHHHHHHHHHHHHHHHHh
Confidence 788888888874322 2222346999887644 599999999999987654
No 280
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=98.43 E-value=3.1e-06 Score=91.85 Aligned_cols=220 Identities=10% Similarity=-0.023 Sum_probs=143.3
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
.|.++..+++..|... +.+|. +|+++|+++|++....|..+-+ +-+.++.++|.+.|++++++ ++|
T Consensus 136 ~~~~~~~~~~~~g~~~---~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~ 207 (399)
T 3tqx_A 136 NHASIIDGIRLCKAQR---YRYKN-----NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNAL 207 (399)
T ss_dssp CCHHHHHHHHSCCSEE---EEECT-----TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCE
T ss_pred ccHHHHHHHHHcCCce---eEeCC-----CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCE
Confidence 6888999999999866 77776 5789999999987665544555 67778899999999999886 899
Q ss_pred ceeccccccc-cc----e------------eeeecCCCccc---ccccc-ccc--------cCCcccCCCCcccHH---H
Q psy13453 94 LKVGGVLRRV-YS----S------------CLVPRGQKSLR---TTVLF-HFL--------FQHWQIPLGRRFRAL---K 141 (764)
Q Consensus 94 lHVDa~l~~~-y~----s------------~ll~rd~~~l~---~~~s~-~~d--------~~d~tle~SRr~~AL---k 141 (764)
+++|.+.... ++ + +++..-.+.+- ..+-. ..+ ...+...+ ....+ .
T Consensus 208 li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 285 (399)
T 3tqx_A 208 VMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASGGYTSGHKEIIEWLRNRSRPYLFSN--TVAPVIVAT 285 (399)
T ss_dssp EEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCCEEEEECHHHHHHHHHHCHHHHSSC--CCCHHHHHH
T ss_pred EEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCceEEEEcCHHHHHHHHHhCcceeccC--CCcHHHHHH
Confidence 9999965211 10 0 11111111111 10000 000 00111111 22222 3
Q ss_pred HHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHH
Q psy13453 142 LWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYD 221 (764)
Q Consensus 142 lWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~ 221 (764)
+.+++..+. +++.++.++..+.++++.+.|++. +++++ ++..+++.|++.. ..-..++.+
T Consensus 286 ~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~-----------------~~~~~~~~~ 345 (399)
T 3tqx_A 286 SLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKL-GFQLV-PGNHPIIPVMLGD-----------------AQLATNMAD 345 (399)
T ss_dssp HHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCSSSEEEEEEEC-----------------HHHHHHHHH
T ss_pred HHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCC-----------------HHHHHHHHH
Confidence 344454443 668888999999999999999987 77765 6777777776531 112367888
Q ss_pred HHHhcCcEEEEece---eCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 222 RIIARKVIYIVKGS---FQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 222 ~L~~~G~~~vs~t~---l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
+|.++|..+..... -.+..++|+++.. .+++++++.+++.|+++.+++
T Consensus 346 ~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~-~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 346 HLLQEGIYVVGFSYPVVPMGKARIRVQMSA-VHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp HHHHTTEECCEECTTTSCTTCEEEEEECCT-TCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHCCCEEeeeCCCCCCCCCceEEEEeec-CCCHHHHHHHHHHHHHHHHHh
Confidence 89998875443211 2345799997654 668999999999999887653
No 281
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=98.42 E-value=4.7e-06 Score=89.53 Aligned_cols=215 Identities=7% Similarity=-0.043 Sum_probs=137.5
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-------CC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-------NG 92 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-------~~ 92 (764)
.|.++.+++...|... +.||+++++.+|+++|+++|++. +-+++-+.++.++|.+-|++++.+ ++
T Consensus 117 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~i~~~-----~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~ 188 (363)
T 3ffh_A 117 TFVQYRQNALIEGAEV---REIPLLQDGEHDLEGMLNAIDEK-----TTIVWICNPNNPTGNYIELADIQAFLDRVPSDV 188 (363)
T ss_dssp SCHHHHHHHHHHTCEE---EEEECCTTSCCCHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTS
T ss_pred ChHHHHHHHHHcCCEE---EEecCCCCCCcCHHHHHHhcccC-----CCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCc
Confidence 4677889999999877 99999988999999999999643 224445778999999988887654 67
Q ss_pred Cceeccccccc-cc---e-----------eeeecCCCccc-cccccccccCCc-------ccCCCCcccHHHHHHHHHHc
Q psy13453 93 PLKVGGVLRRV-YS---S-----------CLVPRGQKSLR-TTVLFHFLFQHW-------QIPLGRRFRALKLWMTLRSY 149 (764)
Q Consensus 93 wlHVDa~l~~~-y~---s-----------~ll~rd~~~l~-~~~s~~~d~~d~-------tle~SRr~~ALklWatL~~l 149 (764)
++++|...... ++ + +++..-.+.+- .-+...+-+.+. ....+-....+..++....+
T Consensus 189 ~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 268 (363)
T 3ffh_A 189 LVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEIIRQLNIVRPPFNTTSIGQKLAIEAI 268 (363)
T ss_dssp EEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHHHHHHHHTCCSCCCBHHHHHHHHHHH
T ss_pred EEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHHHHHHHHhCCCCCCCHHHHHHHHHHh
Confidence 89999864310 00 0 00111111110 000000000000 00001124445555554444
Q ss_pred c-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCc
Q psy13453 150 G-LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKV 228 (764)
Q Consensus 150 G-~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~ 228 (764)
. .+.+.++.++..+..+++.+.++++++++++ ++.-+.+.|++. . + ..++.++|.++|.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~----------------~-~--~~~~~~~l~~~gi 328 (363)
T 3ffh_A 269 KDQAFIGECRTSNANGIKQYEAFAKRFEKVKLY-PANGNFVLIDLG----------------I-E--AGTIFSYLEKNGY 328 (363)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEC-CCCSSEEEEECS----------------S-C--HHHHHHHHHHTTE
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHhhCCCceEC-CCCCeEEEEECC----------------C-C--HHHHHHHHHHCCe
Confidence 2 3667888888999999999999998899975 455566666542 1 1 2467888888887
Q ss_pred EEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 229 IYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 229 ~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
.+..........++|+++. ++++++.+++.|+++
T Consensus 329 ~v~~g~~~~~~~~iRis~~----~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 329 ITRSGAALGFPTAVRITIG----KEEDNSAVIALLEKL 362 (363)
T ss_dssp ECEETTTTTCTTEEEEECC----CHHHHHHHHHHHHHH
T ss_pred EEEeCccCCCCCeEEEECC----CHHHHHHHHHHHHHh
Confidence 6554443333578999865 889999999998764
No 282
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=98.40 E-value=1.6e-06 Score=94.44 Aligned_cols=224 Identities=10% Similarity=0.033 Sum_probs=137.3
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecC------CCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGL------PDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpv------d~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~ 90 (764)
.|.++..+++..|... +.+|+ ++++.+|+++|+++|++. +-+++-+.++.++|.+=| ++++++
T Consensus 135 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~v~~~~p~nptG~~~~~~~l~~i~~ 206 (407)
T 3nra_A 135 DYFANRKLVEFFEGEM---VPVQLDYVSADETRAGLDLTGLEEAFKAG-----ARVFLFSNPNNPAGVVYSAEEIGQIAA 206 (407)
T ss_dssp CCTHHHHHHHHTTCEE---EEEEBCCCSSCCSSCCBCHHHHHHHHHTT-----CCEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred cccchHHHHHHcCCEE---EEeecccccccCcCCCcCHHHHHHHHhhC-----CcEEEEcCCCCCCCcccCHHHHHHHHH
Confidence 5778899999999877 89998 478899999999999862 234555667899999977 666665
Q ss_pred -----CCCceeccccccc-cc-----e------------eeeecCCCccc-cccccccccCC---------cccCCCCcc
Q psy13453 91 -----NGPLKVGGVLRRV-YS-----S------------CLVPRGQKSLR-TTVLFHFLFQH---------WQIPLGRRF 137 (764)
Q Consensus 91 -----~~wlHVDa~l~~~-y~-----s------------~ll~rd~~~l~-~~~s~~~d~~d---------~tle~SRr~ 137 (764)
++++++|.+.... |. + +++..-.+.+- .-+...+-..+ ..-..+-..
T Consensus 207 ~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~ 286 (407)
T 3nra_A 207 LAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEKLQAIVSLRA 286 (407)
T ss_dssp HHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHHHHHHHTSSS
T ss_pred HHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHHHHhhhccCC
Confidence 8999999965321 11 1 01111111110 00000000000 000000111
Q ss_pred cHHHHHHHHHHc--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHH
Q psy13453 138 RALKLWMTLRSY--GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDL 215 (764)
Q Consensus 138 ~ALklWatL~~l--G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~ 215 (764)
..+..++....+ +.+.+.++.++..++++++.+.++++++++++.+..-..+.+++... ..+
T Consensus 287 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~-- 350 (407)
T 3nra_A 287 AGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKL--------------AVA-- 350 (407)
T ss_dssp CHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCB--------------SSC--
T ss_pred ChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCC--------------CCC--
Confidence 233444444444 44667888899999999999999999898876544333333332210 111
Q ss_pred HHHHHHHHHh-cCcEEEEecee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 216 NKAVYDRIIA-RKVIYIVKGSF--QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 216 n~~L~~~L~~-~G~~~vs~t~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
..++.++|.+ .|..+...... .+..++|++++. ++++++.+++.|+++.+++
T Consensus 351 ~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~---~~~~i~~~~~~l~~~~~~~ 405 (407)
T 3nra_A 351 PAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ---DHEAAVAAARRIVTLVERY 405 (407)
T ss_dssp HHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS---CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC---CHHHHHHHHHHHHHHHHHh
Confidence 2467777765 48755443322 246789998874 7999999999999887664
No 283
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=98.40 E-value=8e-07 Score=95.63 Aligned_cols=222 Identities=12% Similarity=0.045 Sum_probs=135.3
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
.|+++.+++...|+.. +.+|+++++.+|+++|+++|+++ +-+++.+-+ +|.+.|++++.+ ++++
T Consensus 83 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~d~~~l~~~i~~~-----~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~l 151 (375)
T 2fnu_A 83 SFVATANMLLESGYTP---VFAGIKNDGNIDELALEKLINER-----TKAIVSVDY---AGKSVEVESVQKLCKKHSLSF 151 (375)
T ss_dssp SCTHHHHHHHHTTCEE---EECCBCTTSSBCGGGSGGGCCTT-----EEEEEEECG---GGCCCCHHHHHHHHHHHTCEE
T ss_pred ccHhHHHHHHHCCCEE---EEeccCCCCCCCHHHHHhhcCcC-----ceEEEEeCC---cCCccCHHHHHHHHHHcCCEE
Confidence 6888999999999876 99999988899999999988642 223333323 899999999876 8999
Q ss_pred eeccccccc-------c---ceeeeecCC--Cccccc---cccc--cc-------cCCcc------------cCCCC-cc
Q psy13453 95 KVGGVLRRV-------Y---SSCLVPRGQ--KSLRTT---VLFH--FL-------FQHWQ------------IPLGR-RF 137 (764)
Q Consensus 95 HVDa~l~~~-------y---~s~ll~rd~--~~l~~~---~s~~--~d-------~~d~t------------le~SR-r~ 137 (764)
++|++.... + +-+.+..-. +.+... +-.. .+ +...+ ..+.+ +.
T Consensus 152 i~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~K~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (375)
T 2fnu_A 152 LSDSSHALGSEYQNKKVGGFALASVFSFHAIKPITTAEGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRL 231 (375)
T ss_dssp EEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCC
T ss_pred EEECccccCCeECCeeccccCCeEEEeCCCCCCccccCceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCC
Confidence 999963110 0 001111000 111100 0000 00 00000 01111 33
Q ss_pred cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC-----CceeEEEEeeccccccccccccCccCCc
Q psy13453 138 RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP-----SMGLVCFRLKVRFWDKLDNLFGTISFGD 212 (764)
Q Consensus 138 ~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P-----~l~iV~Fry~P~~~~~~~~~~~~~~~~~ 212 (764)
..+...+.+ ...+++.+++++..++++++.+.|++.|++++..++ ...++.+++.+. ..
T Consensus 232 ~~~~~a~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~ 295 (375)
T 2fnu_A 232 NEIQSALGL--SQLKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQK--------------FF 295 (375)
T ss_dssp CHHHHHHHH--HHHTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGG--------------GG
T ss_pred CHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCcc--------------cc
Confidence 344333333 345788899999999999999999999999987642 123344544311 00
Q ss_pred cHHHHHHHHHHHhcCcEEEEec-eeC--------------------CeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 213 NDLNKAVYDRIIARKVIYIVKG-SFQ--------------------DRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 213 d~~n~~L~~~L~~~G~~~vs~t-~l~--------------------g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
. -..++.++|.+.|....... ... ...++|++ .++.+++++++.+++.|+++.+++
T Consensus 296 ~-~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~-~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 296 T-CKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLP-CHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp G-GHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEEC-CCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred c-hHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEec-CCCCCCHHHHHHHHHHHHHHHHHh
Confidence 0 12468888888886433110 000 12579996 556778999999999999887654
No 284
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=98.36 E-value=4.8e-07 Score=98.58 Aligned_cols=218 Identities=10% Similarity=0.014 Sum_probs=138.1
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC-CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP-DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd-~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
.|.++..++..+|... +.||++ +++.+|+++|+++|+++ +-+|. .+.++|.+.|++++++ +++
T Consensus 105 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~--~~n~tG~~~~~~~i~~l~~~~~~~ 173 (391)
T 3dr4_A 105 TYIASANSVTYCGATP---VLVDNDPRTFNLDAAKLEALITPR------TKAIM--PVHLYGQICDMDPILEVARRHNLL 173 (391)
T ss_dssp SCTHHHHHHHHTTCEE---EEECBCTTTCSBCGGGSGGGCCTT------EEEEC--CBCGGGCCCCHHHHHHHHHHTTCE
T ss_pred chHHHHHHHHHCCCEE---EEEecCccccCcCHHHHHHhcCCC------ceEEE--EECCCCChhhHHHHHHHHHHcCCE
Confidence 6788999999999877 999998 67899999999988642 22321 3568999999999886 899
Q ss_pred ceeccccc--ccc--------------------------ceeeeecCCCccccccccccccC------CcccCCCCcccH
Q psy13453 94 LKVGGVLR--RVY--------------------------SSCLVPRGQKSLRTTVLFHFLFQ------HWQIPLGRRFRA 139 (764)
Q Consensus 94 lHVDa~l~--~~y--------------------------~s~ll~rd~~~l~~~~s~~~d~~------d~tle~SRr~~A 139 (764)
+++|++.. ..+ +++++.+++..... +......+ .+....+.....
T Consensus 174 li~D~a~~~g~~~~~~~~~~~~di~~~S~s~~K~l~~g~gg~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~g~~~~~ 252 (391)
T 3dr4_A 174 VIEDAAEAVGATYRGKKSGSLGDCATFSFFGNAIITTGEGGMITTNDDDLAAK-MRLLRGQGMDPNRRYWFPIVGFNYRM 252 (391)
T ss_dssp EEEECTTCTTCEETTEETTSSSSEEEEECBTTSSSCCBSCEEEEESCHHHHHH-HHHHHBTTCCTTSTTCCSSCCCBCBC
T ss_pred EEEECcccccceECCeeecccCCEEEEECCCCCcCCcCCeEEEEECCHHHHHH-HHHHHhcCCCCCCcccccccccccCC
Confidence 99999531 111 01121111110000 00000000 011111223344
Q ss_pred HHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC--CC-----ceeEEEEeeccccccccccccCccCCc
Q psy13453 140 LKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCP--PS-----MGLVCFRLKVRFWDKLDNLFGTISFGD 212 (764)
Q Consensus 140 LklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~--P~-----l~iV~Fry~P~~~~~~~~~~~~~~~~~ 212 (764)
..+.+++.....+++.+++++..++++++.+.+++. ++++... +. ..++.++.... .+.
T Consensus 253 ~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~i~~~~~-------------~~~ 318 (391)
T 3dr4_A 253 TNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARL-GNRVTKPHVALTGRHVFWMYTVRLGEG-------------LST 318 (391)
T ss_dssp CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCTTSCCCCSSEEEEECSS-------------CSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCCCCcceeEEEEEEECCc-------------cch
Confidence 456666666667889999999999999999999998 8888765 22 22345544210 011
Q ss_pred cHHHHHHHHHHHhcCcEEEEec-eeC-------------------CeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 213 NDLNKAVYDRIIARKVIYIVKG-SFQ-------------------DRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 213 d~~n~~L~~~L~~~G~~~vs~t-~l~-------------------g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
+ ..++.++|.++|....... .++ ....+|+ .+++.+++++++.+++.|+++
T Consensus 319 ~--~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl-~~~~~~t~edi~~~~~~l~~~ 389 (391)
T 3dr4_A 319 T--RDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNL-PTHAGLTEADIDRVIAALDQV 389 (391)
T ss_dssp C--HHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEE-CCCTTCCHHHHHHHHHHHHTT
T ss_pred h--HHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEc-cCCCCCCHHHHHHHHHHHHHH
Confidence 1 2578888999997543221 000 1357898 578888999999999988764
No 285
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=98.36 E-value=5.5e-06 Score=92.31 Aligned_cols=169 Identities=17% Similarity=0.134 Sum_probs=109.4
Q ss_pred cCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcE--EEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCce
Q psy13453 555 LSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGG--IIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKL 632 (764)
Q Consensus 555 ~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~G--vfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~ 632 (764)
...-...++|..+++...++||.+.. .+| +=.-+||.||+.+..+..+. . .
T Consensus 93 gGce~vD~iE~la~~rak~lF~a~~A--------~w~VNVQP~SGs~AN~avy~All~P---G----------------D 145 (490)
T 3ou5_A 93 GGAEVVDEIELLCQRRALEAFDLDPA--------QWGVNVQPYSGSPANLAVYTALLQP---H----------------D 145 (490)
T ss_dssp ---CHHHHHHHHHHHHHHHHTTCCTT--------TEEEECCCSSHHHHHHHHHHHHCC----C----------------C
T ss_pred CCChHHHHHHHHHHHHHHHHhCCCcc--------ccCCCCCcCCHHHHHHHHHHHHcCC---C----------------C
Confidence 34456789999999999999998753 233 23358999998776644221 1 1
Q ss_pred EEE---ecCCcchhHH-----HHHHhCCC--ceEEEecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccc
Q psy13453 633 VAY---TSDQSNSSVE-----KSAIIGDV--PVRQLRSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFD 701 (764)
Q Consensus 633 vi~---~S~~aH~Sv~-----kAa~~lGl--~v~~Vp~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiD 701 (764)
.|+ .+.-.|.|-- +.....|. +...-++| +++.||.+++++...+. +|-+|+ +|.+.+--.-
T Consensus 146 ~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~-----kPklIi--~G~SaY~r~i 218 (490)
T 3ou5_A 146 RIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLF-----RPRLII--AGTSAYARLI 218 (490)
T ss_dssp CEECBC----------------------------CBCEETTTTEECHHHHHHHHHHH-----CCSEEE--ECCSSCCSCC
T ss_pred EEEecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhhc-----CCCeEE--ECCccCcccc
Confidence 122 2344454433 22233444 33444456 67999999999998876 376665 4666666777
Q ss_pred cHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCc
Q psy13453 702 NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDC 760 (764)
Q Consensus 702 pl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~ 760 (764)
|++++++||++.|.+|.+|.||-.+++....+..- ++.||.+|.+.||.|..|.|.
T Consensus 219 d~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP---~~~ADvVTtTTHKTLrGPrGG 274 (490)
T 3ou5_A 219 DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSP---FKHADIVTTTTHKTLRGARSG 274 (490)
T ss_dssp CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCG---GGTCSEEEEESSSTTCSCSCE
T ss_pred CHHHHHHHHhhcccEEEechhhhhhhhcccccCCc---cccceEEeccccccccCCCce
Confidence 89999999999999999999998877665444433 456899999999999999873
No 286
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=98.36 E-value=3.1e-06 Score=92.40 Aligned_cols=221 Identities=10% Similarity=-0.039 Sum_probs=140.9
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
.|.|+..+++..|... +.||++ |+++|++.|++... .++-+++-+.++.++|.+.|++++++ ++++
T Consensus 141 ~~~~~~~~~~~~g~~~---~~v~~~-----d~~~le~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~l 211 (401)
T 2bwn_A 141 NHASMIEGIKRNAGPK---RIFRHN-----DVAHLRELIAADDP-AAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALT 211 (401)
T ss_dssp CCHHHHHHHHHSCCCE---EEECTT-----CHHHHHHHHHHSCT-TSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEE
T ss_pred hhHHHHHHHHHcCCeE---EEEcCC-----CHHHHHHHHHhhcc-CCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEE
Confidence 6889999999999866 888886 89999999985321 12224467889999999999999886 8999
Q ss_pred eeccccccc-c---c-eeeeecC----CCccccccc------ccc-----cc-------C-CcccCCCC-cccHHHHHHH
Q psy13453 95 KVGGVLRRV-Y---S-SCLVPRG----QKSLRTTVL------FHF-----LF-------Q-HWQIPLGR-RFRALKLWMT 145 (764)
Q Consensus 95 HVDa~l~~~-y---~-s~ll~rd----~~~l~~~~s------~~~-----d~-------~-d~tle~SR-r~~ALklWat 145 (764)
++|++.... | + +++...+ ......+++ ..+ ++ . .+....+- ......+.++
T Consensus 212 i~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~a 291 (401)
T 2bwn_A 212 YIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFGGYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQAS 291 (401)
T ss_dssp EEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCCEEEEECHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHH
T ss_pred EEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCCCEEecCHHHHHHHHHhCcCceecCCCCHHHHHHHHHH
Confidence 999975421 1 1 1110000 000000000 000 00 0 01111111 2233455778
Q ss_pred HHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHH-
Q psy13453 146 LRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRII- 224 (764)
Q Consensus 146 L~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~- 224 (764)
+..+...|+.++.++..++++++.+.|++. +++++. |..+++.|++.. ..-..++.++|.
T Consensus 292 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~-----------------~~~~~~~~~~L~~ 352 (401)
T 2bwn_A 292 IAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMPIID-HGSHIVPVVIGD-----------------PVHTKAVSDMLLS 352 (401)
T ss_dssp HHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCC-CSSSCEEEECCC-----------------HHHHHHHHHHHHH
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCcccC-CCCCeEEEEeCC-----------------hHHHHHHHHHHHh
Confidence 888877788999999999999999999987 887764 556777776521 111356888886
Q ss_pred hcCcEEEEece--e-CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 225 ARKVIYIVKGS--F-QDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 225 ~~G~~~vs~t~--l-~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
+.|..+..... . ++..++|+++. ..+++++++.+++.|+++.++
T Consensus 353 ~~gi~v~~~~~~~~~~~~~~iRis~~-~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 353 DYGVYVQPINFPTVPRGTERLRFTPS-PVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp HHCEECCEECTTTSCTTCCEEEECCC-TTSCHHHHHHHHHHHHHHC--
T ss_pred cCCEEEeecCCCCCCCCCceEEEEee-CCCCHHHHHHHHHHHHHHHHh
Confidence 67875432221 1 13468999766 345899999999999887543
No 287
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=98.34 E-value=2.7e-06 Score=92.87 Aligned_cols=229 Identities=13% Similarity=0.101 Sum_probs=136.8
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCc-EE-EEeeCCcccccccCch---hhhc----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCP-MC-SGYCGRTLHQDIQSLN---APVS---- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p-~~-VatAGTT~~G~iDpi~---~ia~---- 90 (764)
.|+++.++++..|... +.||+++++ +|+++|+++|++....+..+ ++ +-..++.++|.+-|++ ++++
T Consensus 131 ~~~~~~~~~~~~g~~~---~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~ 206 (407)
T 2zc0_A 131 SYINTLLAFEQLGAKI---EGVPVDNDG-MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASK 206 (407)
T ss_dssp CCHHHHHHHHTTTCEE---EEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHcCCEE---EEcccCCCC-CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 4678889999999866 889998765 99999999998543232223 44 4566889999998887 5544
Q ss_pred -CCCceeccccccc-cc-----e----------eeeecCCCcccccccccc-----c----cCCcccCCCCcccHHHHHH
Q psy13453 91 -NGPLKVGGVLRRV-YS-----S----------CLVPRGQKSLRTTVLFHF-----L----FQHWQIPLGRRFRALKLWM 144 (764)
Q Consensus 91 -~~wlHVDa~l~~~-y~-----s----------~ll~rd~~~l~~~~s~~~-----d----~~d~tle~SRr~~ALklWa 144 (764)
++++++|.+.... +. + +++..-.+.+..-+...+ + +.......+.+...+..++
T Consensus 207 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (407)
T 2zc0_A 207 YDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLGTGFRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYI 286 (407)
T ss_dssp HTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTCTTSCCEEEECCHHHHHHHHHHHTTTTSSSCHHHHHH
T ss_pred cCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccCCCcceEEEecCHHHHHHHHHHHHhhcCCCCHHHHHH
Confidence 8999999964211 10 0 011110111110000000 0 0000001111223443433
Q ss_pred HHHHc--c--H-HHHHHHHHHHHHHHHHHHHHHhc-CCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHH
Q psy13453 145 TLRSY--G--L-KGLQAYLRKHISLAKKFADLVEQ-DDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKA 218 (764)
Q Consensus 145 tL~~l--G--~-eGy~~~i~~~i~lA~~l~~~I~~-~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~ 218 (764)
+...+ + . +.+.++.++..+.++++.+.|++ .|+++++.+.....+.|++.+ +.+ ..+
T Consensus 287 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~--~~~ 349 (407)
T 2zc0_A 287 ALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPE---------------GAD--GIS 349 (407)
T ss_dssp HHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEECST---------------TCC--HHH
T ss_pred HHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCcEEEEEEcCC---------------CCC--HHH
Confidence 33332 3 2 44666777777888999999987 578876554444456665421 111 246
Q ss_pred HHHHHHhc-CcEEEEecee----CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 219 VYDRIIAR-KVIYIVKGSF----QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 219 L~~~L~~~-G~~~vs~t~l----~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
+.++|.++ |..+...... .+..++|+++..+ ++++++.+++.|+++.+++.
T Consensus 350 l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~--~~~~i~~~~~~l~~~l~~~~ 405 (407)
T 2zc0_A 350 FANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRP--SKEEIPIGIKKLAKLYKEKF 405 (407)
T ss_dssp HHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSS--CTTHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCC--CHHHHHHHHHHHHHHHHHHh
Confidence 88888888 8754433222 1357899988766 68999999999999877653
No 288
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=98.33 E-value=3.2e-07 Score=98.95 Aligned_cols=219 Identities=9% Similarity=0.033 Sum_probs=137.1
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
.|.++..++...|+.. +.+|+++++.+|+++|+++|++. +-+|- ++.++|.+.|++++++ ++++
T Consensus 87 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~d~~~l~~~~~~~------~~~v~--~~n~~G~~~~~~~i~~~~~~~~~~l 155 (374)
T 3uwc_A 87 TFIASVGAIVQAGATP---VLVDSENGYVIDPEKIEAAITDK------TKAIM--PVHYTGNIADMPALAKIAKKHNLHI 155 (374)
T ss_dssp SCHHHHHHHHHTTCEE---EEECBCTTSSBCGGGTGGGCCTT------EEEEC--CBCGGGCCCCHHHHHHHHHHTTCEE
T ss_pred ccHHHHHHHHHcCCEE---EEEecCCCCCcCHHHHHHhCCCC------ceEEE--EeCCcCCcCCHHHHHHHHHHcCCEE
Confidence 5788999999999877 99999988999999999988652 22322 7779999999999886 8999
Q ss_pred eecccccc--cc--------ceeeeec--CCCcccc----cccc--ccc-------cC------Ccc-cCCCCcccHHHH
Q psy13453 95 KVGGVLRR--VY--------SSCLVPR--GQKSLRT----TVLF--HFL-------FQ------HWQ-IPLGRRFRALKL 142 (764)
Q Consensus 95 HVDa~l~~--~y--------~s~ll~r--d~~~l~~----~~s~--~~d-------~~------d~t-le~SRr~~ALkl 142 (764)
++|++... .+ +-++.+. ..+.+.. .+-. ..+ +. .+. ...+.......+
T Consensus 156 i~D~~~~~g~~~~~~~~~~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
T 3uwc_A 156 VEDACQTILGRINDKFVGSWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTI 235 (374)
T ss_dssp EEECTTCTTCEETTEETTSSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHH
T ss_pred EEeCCCccCceeCCeeccccccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHH
Confidence 99995321 11 1111111 0011111 0000 000 00 010 011112222344
Q ss_pred HHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEeCCCCceeE---EEEeeccccccccccccCccCCccHHHHH
Q psy13453 143 WMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDR-FELVCPPSMGLV---CFRLKVRFWDKLDNLFGTISFGDNDLNKA 218 (764)
Q Consensus 143 WatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~-~ell~~P~l~iV---~Fry~P~~~~~~~~~~~~~~~~~d~~n~~ 218 (764)
.+++.....+++.++.++..++++++.+.+++.++ +++...++-... .|.... . + ..+
T Consensus 236 ~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~-~--~~~ 297 (374)
T 3uwc_A 236 QAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRV---------------K-Y--RDQ 297 (374)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEE---------------T-T--HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEc---------------C-C--HHH
Confidence 55555555677888999999999999999999988 888655543222 222110 0 1 246
Q ss_pred HHHHHHhcCcEEEEec--eeC---------------------CeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 219 VYDRIIARKVIYIVKG--SFQ---------------------DRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 219 L~~~L~~~G~~~vs~t--~l~---------------------g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
+.++|.++|....... ..+ ....+|+ .+++.+++++++.+++.|+++.+
T Consensus 298 l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl-~~~~~~t~edi~~~~~~l~~~l~ 369 (374)
T 3uwc_A 298 LFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITL-PAHPYLTEEEINYIIKKVREFYL 369 (374)
T ss_dssp HHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEE-CCCTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEc-cCCCCCCHHHHHHHHHHHHHHHH
Confidence 7888888887432211 000 1267898 47778899999999999988764
No 289
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=98.29 E-value=2e-06 Score=94.11 Aligned_cols=211 Identities=12% Similarity=0.052 Sum_probs=129.3
Q ss_pred HHHhhcCCCCCCeEEecCCCCCc--ccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc-cCchhhhcCCCceecccc--
Q psy13453 26 KATHSLSGTPDQVRLSGLPDSEW--LAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI-QSLNAPVSNGPLKVGGVL-- 100 (764)
Q Consensus 26 KAa~~LGl~~~~v~~Vpvd~~~r--mD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i-Dpi~~ia~~~wlHVDa~l-- 100 (764)
+.|.-.|+.. ..||++.++. .+++. + |+++ +-++..+--.|.+|++ |+|.+ .++++||||.-
T Consensus 109 ~~a~~~G~~v---~~~~~~~~g~~~~~~~~-~--l~~~-----t~lv~~~~~e~~tG~~~~~i~~--~~~~~~vD~~q~~ 175 (361)
T 3m5u_A 109 KEAQILGVNV---KTVASSEESNFDHIPRV-E--FSDN-----ADYAYICSNNTIYGTQYQNYPK--TKTPLIVDASSDF 175 (361)
T ss_dssp HHHHHTTCCE---EEEEECTTTTSCSCCCC-C--CCTT-----SSEEEEESEETTTTEECSSCCC--CSSCEEEECGGGT
T ss_pred HHHHHcCCce---EEEecccCcCCCcCChh-h--cCCC-----CCEEEEeCCCCCcceeCCcccc--cCCEEEEEccccc
Confidence 3445557655 9999998774 57766 3 5442 2244456777889997 65543 28899999931
Q ss_pred ----------------ccc----cc-eeeeecCCCccccccc-cccccCCccc---CCCCc-----ccHHHHHHHHHHcc
Q psy13453 101 ----------------RRV----YS-SCLVPRGQKSLRTTVL-FHFLFQHWQI---PLGRR-----FRALKLWMTLRSYG 150 (764)
Q Consensus 101 ----------------~~~----y~-s~ll~rd~~~l~~~~s-~~~d~~d~tl---e~SRr-----~~ALklWatL~~lG 150 (764)
.|+ .+ ++++.|++ .+...-. ..+.+.+|.. ..+|. ...+.+-++++++=
T Consensus 176 g~~~id~~~~d~~~~s~~K~~gp~G~g~l~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~ 254 (361)
T 3m5u_A 176 FSRKVDFSNIALFYGGVQKNAGISGLSCIFIRKD-MLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLL 254 (361)
T ss_dssp TSSCCCCTTEEEEEEETTTTSSCTTCEEEEEEHH-HHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCEEEEechhccCCCccEEEEEcHH-HHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHH
Confidence 111 22 34444432 1110000 0011222211 12221 12335667777776
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHhcCCCe-EEeCCCC---ceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHh
Q psy13453 151 LK-GLQAYLRKHISLAKKFADLVEQDDRF-ELVCPPS---MGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIA 225 (764)
Q Consensus 151 ~e-Gy~~~i~~~i~lA~~l~~~I~~~p~~-ell~~P~---l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~ 225 (764)
.+ |+.++.++..++++++.+.|++.+++ ++..+++ ..+++|++. +...++..+.+.|.+
T Consensus 255 ~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~----------------~~~~~~~~~~~~L~~ 318 (361)
T 3m5u_A 255 NQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIA----------------KNKDLEPLFVKEAEE 318 (361)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEES----------------SCTTHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECC----------------CchhhhHHHHHHHHH
Confidence 66 79999999999999999999999876 6665543 358999864 101133467788888
Q ss_pred cCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 226 RKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 226 ~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
.|.... ...+....+|+++.+ .++++||+.+++.|+++.++
T Consensus 319 ~gI~~~--~g~~~~g~iRiS~~~-~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 319 AGMIGL--KGHRILGGIRASIYN-ALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp TTEECC--BCCTTTCSEEEECCT-TSCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEe--cCCCccCeEEEEccC-CCCHHHHHHHHHHHHHHHHh
Confidence 887532 222222359998655 56899999999999988754
No 290
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=98.28 E-value=3.4e-06 Score=97.28 Aligned_cols=184 Identities=9% Similarity=-0.004 Sum_probs=115.3
Q ss_pred cccCCchH-HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 553 SWLSSPAC-TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 553 ~~~~sp~~-t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
.|...... ...|..+..|+.+-.+..... ......++|+|+++++..++.+...+.+- .++
T Consensus 133 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~----~~~~~I~~t~G~~eal~~~~~~l~~~~l~--------------~~G 194 (546)
T 2zy4_A 133 NYPVPPRMLNISEKIVRQYIIREMGADAIP----SESVNLFAVEGGTAAMAYIFESLKLNGLL--------------KAG 194 (546)
T ss_dssp SCCSSSSCCHHHHHHHHHHHHHHTTCTTSC----GGGEEEEEEEHHHHHHHHHHHHHHHTTSS--------------CTT
T ss_pred CCCCCcCCHHHHHHHHHHHHHHhccCCCCC----CCcceEEEECCHHHHHHHHHHHhhhhhcC--------------CCC
Confidence 34443333 344555666777765431000 00135789999999987776542211110 112
Q ss_pred eEEEecCCcchhHHHHHHhC--CCceEEEecCC--CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc---HH
Q psy13453 632 LVAYTSDQSNSSVEKSAIIG--DVPVRQLRSDD--NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN---LE 704 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kAa~~l--Gl~v~~Vp~d~--~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp---l~ 704 (764)
..|++.+-+|.....++.+. |+.++.+|+++ ++.+|+++|++.+.. .+-+|+.+..++.+|.+-+ ++
T Consensus 195 d~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~v~l~~p~NPtG~~~~~~~l~ 268 (546)
T 2zy4_A 195 DKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDP------AIKIFFCVNPSNPPSVKMDQRSLE 268 (546)
T ss_dssp CEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGST------TEEEEEEESSCSSSCBCCCHHHHH
T ss_pred CEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCC------CCeEEEEECCCCCCCccCCHHHHH
Confidence 35677778888888877664 56788888874 357999999887532 2446666788999999854 66
Q ss_pred HHHHHH--HhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 705 ELGPIC--QEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 705 eIa~i~--~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
+|+++| +++|+++++|.+|+.+..-.+...... ...+-+..+++|+++.| +-+|.+
T Consensus 269 ~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~---~~~~i~~~S~SK~~g~~GlRiG~~ 327 (546)
T 2zy4_A 269 RVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAIC---PENTLLVYSFSKYFGATGWRLGVV 327 (546)
T ss_dssp HHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHC---GGGEEEEEESTTTTTCGGGCEEEE
T ss_pred HHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhC---CCCEEEEEeCccccCCCCcceEEE
Confidence 788888 789999999999997542111111111 12356788999998755 224543
No 291
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=98.28 E-value=2.1e-06 Score=91.85 Aligned_cols=213 Identities=12% Similarity=0.042 Sum_probs=129.9
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC-CCcccHHHHHH-HHHHHhhCCCCcEEEEeeCCcccccc-cCchhhhcCCCcee
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD-SEWLAYLTLRT-IYESFRKSFLCPMCSGYCGRTLHQDI-QSLNAPVSNGPLKV 96 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~-~~rmD~~aLe~-~I~~~~~~G~~p~~VatAGTT~~G~i-Dpi~~ia~~~wlHV 96 (764)
.||+. ..+..+| .. +.||+++ ++.+|+++|++ +|++. +-+++-+.+++++|.+ |+|.+ ..++++++
T Consensus 103 ~~~~~-~~~~~~g-~~---~~v~~~~~~~~~d~~~l~~~~i~~~-----~k~v~~~~~~nptG~~~~~i~~-~~~~~li~ 171 (360)
T 1w23_A 103 SEKAL-KEAKLLG-ET---HIAASTKANSYQSIPDFSEFQLNEN-----DAYLHITSNNTIYGTQYQNFPE-INHAPLIA 171 (360)
T ss_dssp HHHHH-HHHHTTS-EE---EEEEECGGGTSCSCCCGGGCCCCTT-----EEEEEEESEETTTTEECSSCCC-CCSSCEEE
T ss_pred hHHHH-HHHHHhC-Ce---EEeecccccCcCCccchHhhccCCC-----CCEEEEeCCCCCcceecccccc-cCCceEEE
Confidence 34553 4456667 54 9999985 77899999998 77432 2244566789999998 65655 33899999
Q ss_pred ccccccc--------c--------------c-eeeeecCCCccccccccccccCCccc-------C----CCC-cccHHH
Q psy13453 97 GGVLRRV--------Y--------------S-SCLVPRGQKSLRTTVLFHFLFQHWQI-------P----LGR-RFRALK 141 (764)
Q Consensus 97 Da~l~~~--------y--------------~-s~ll~rd~~~l~~~~s~~~d~~d~tl-------e----~SR-r~~ALk 141 (764)
|++.... + + ++++.++. .... +. ....+.+ . ++- ......
T Consensus 172 D~a~~~~~~~~~~~~~di~~~s~sK~~~~~G~G~~~~~~~-~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (360)
T 1w23_A 172 DMSSDILSRPLKVNQFGMIYAGAQKNLGPSGVTVVIVKKD-LLNT-KV---EQVPTMLQYATHIKSDSLYNTPPTFSIYM 246 (360)
T ss_dssp ECTTTTTSSCCCGGGCSEEEEETTTTTSCTTCEEEEEEHH-HHCS-CC---TTCCGGGCHHHHHHTTTCSSCCCHHHHHH
T ss_pred echhhcCCCCcCcccCCEEEEEcccccCCCCcEEEEEcHH-HHhh-cc---cCCcchhhhhhhhhccCCCCCCCHHHHHH
Confidence 9963110 0 0 12222111 0000 00 0000111 0 111 112234
Q ss_pred HHHHHHHccHH-HHHHHHHHHHHHHHHHHHHHhcCCCe-EEeCCC--Cce-eEEEEeeccccccccccccCccCCccHHH
Q psy13453 142 LWMTLRSYGLK-GLQAYLRKHISLAKKFADLVEQDDRF-ELVCPP--SMG-LVCFRLKVRFWDKLDNLFGTISFGDNDLN 216 (764)
Q Consensus 142 lWatL~~lG~e-Gy~~~i~~~i~lA~~l~~~I~~~p~~-ell~~P--~l~-iV~Fry~P~~~~~~~~~~~~~~~~~d~~n 216 (764)
+.+++..+..+ ++.++.++..++++++.+.|++.+++ ....+| ..+ ++.|++.. ....
T Consensus 247 ~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~ 309 (360)
T 1w23_A 247 LRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRN-----------------EELN 309 (360)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSS-----------------HHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCC-----------------CccH
Confidence 56667766555 78999999999999999999998765 654334 234 77776521 0112
Q ss_pred HHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 217 KAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 217 ~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
.++.++|.+.|....... ....++|+++.. .+++++++.+++.|+++.+
T Consensus 310 ~~~~~~l~~~gi~~~~~~--~~~~~iRis~~~-~~~~~~i~~~~~~l~~~~~ 358 (360)
T 1w23_A 310 QQFLAKAKEQGFVGLNGH--RSVGGCRASIYN-AVPIDACIALRELMIQFKE 358 (360)
T ss_dssp HHHHHHHHHTTEESCBCC--TTTCSEEEECCT-TSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCeeeecCC--CCCCeEEEEecC-CCCHHHHHHHHHHHHHHHh
Confidence 467788888887542221 124579998764 4578999999999988754
No 292
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=98.28 E-value=5.4e-06 Score=90.29 Aligned_cols=214 Identities=8% Similarity=0.013 Sum_probs=134.9
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCC-CcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDS-EWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~-~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
.|.|+..+++..|... +.+|++++ +.+|+++|+++|++. +-+++.+ .++|..+|++++++ +++
T Consensus 89 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~~d~~~l~~~i~~~-----~~~v~~~---~~~g~~~~~~~i~~l~~~~~~~ 157 (390)
T 3b8x_A 89 SWSTTYYPLQQYGLRV---KFVDIDINTLNIDIESLKEAVTDS-----TKAILTV---NLLGNPNNFDEINKIIGGRDII 157 (390)
T ss_dssp SCHHHHHHHHHTTCEE---EEECBCTTTCSBCHHHHHHHCCTT-----EEEEEEE---CGGGCCCCHHHHHHHHTTSCCE
T ss_pred CcHHHHHHHHHcCCEE---EEEecCccccCcCHHHHHHHhCcC-----CeEEEEE---CCccChhhHHHHHHHHHHcCCE
Confidence 6889999999999876 99999865 999999999999652 1233332 25788899999876 889
Q ss_pred ceeccccc------------------------ccc----ceeeeecCCCccccccccccccC------------------
Q psy13453 94 LKVGGVLR------------------------RVY----SSCLVPRGQKSLRTTVLFHFLFQ------------------ 127 (764)
Q Consensus 94 lHVDa~l~------------------------~~y----~s~ll~rd~~~l~~~~s~~~d~~------------------ 127 (764)
+|+|++.. +++ +++++.+++..... +....+.+
T Consensus 158 li~D~a~~~g~~~~~~~~g~~~~~~~~s~~~~k~~~~g~gG~~~~~~~~l~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~ 236 (390)
T 3b8x_A 158 LLEDNCESMGATFNNKCAGTFGLMGTFSSFYSNHIATMEGGCIVTDDEEIYHI-LLCIRAHGWTRNLPKKNKVTGVKSDD 236 (390)
T ss_dssp EEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHH-HHHHTBTTBSTTSCSEETTTEECCSC
T ss_pred EEEECcCcccCEECCcccccccceEEEEccCCCCCccCCceEEEeCCHHHHHH-HHHHHhcCCCcccccccccccccccc
Confidence 99998531 001 13333333211000 00000000
Q ss_pred ------CcccCCCC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC-CceeEEE--Eeeccc
Q psy13453 128 ------HWQIPLGR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP-SMGLVCF--RLKVRF 197 (764)
Q Consensus 128 ------d~tle~SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P-~l~iV~F--ry~P~~ 197 (764)
.+...+.+ +...+..++.+..+ +.+.+.+++..++++++.+.|+++|++++..++ ..+.+.| ++.+.
T Consensus 237 ~~~~~~~~~~~g~~~~~~~~~aa~~l~~l--~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~- 313 (390)
T 3b8x_A 237 QFEESFKFVLPGYNVRPLEMSGAIGIEQL--KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIKKD- 313 (390)
T ss_dssp TTTSSSCBCSCCCBCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEECTT-
T ss_pred ccccccceeccccccCcCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEecCc-
Confidence 01111222 46678888887764 788999999999999999999999999987653 3333333 43210
Q ss_pred cccccccccCccCCccHHHHHHHHHHHhcCcEEEEe---------ceeCC----------------eeEEEEeccCCCCC
Q psy13453 198 WDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVK---------GSFQD----------------RLFMRFAICSSQTE 252 (764)
Q Consensus 198 ~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~---------t~l~g----------------~~~LRi~v~np~Tt 252 (764)
.+.+ ..++.+.|.+.|...-.. ..++. ...||+. +++.++
T Consensus 314 ------------~~~~--~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~-~~~~~t 378 (390)
T 3b8x_A 314 ------------SGVI--RKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVG-NHQIEL 378 (390)
T ss_dssp ------------SCCC--HHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEE-CCSSCC
T ss_pred ------------Cccc--HHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEee-CCCCCC
Confidence 0111 246788888888643220 00110 1368884 788899
Q ss_pred HHHHHHHHHHH
Q psy13453 253 ESDVQLGWNEI 263 (764)
Q Consensus 253 ~e~i~~~l~~l 263 (764)
+++++.+++.|
T Consensus 379 ~~di~~i~~~l 389 (390)
T 3b8x_A 379 FDEIDYLREVL 389 (390)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhh
Confidence 99999998765
No 293
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=98.28 E-value=3.7e-06 Score=90.96 Aligned_cols=217 Identities=10% Similarity=0.052 Sum_probs=133.3
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC----CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc---cCchhhhc--
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP----DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI---QSLNAPVS-- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd----~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i---Dpi~~ia~-- 90 (764)
.|.++..++..+|... +.+|++ .++++|+++|+++|++ . -+++-+.++.++|.+ +++.++++
T Consensus 123 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~d~~~l~~~l~~-~-----~~v~i~~p~nptG~~~~~~~l~~i~~~~ 193 (391)
T 4dq6_A 123 VYSPFNSVVKNNNREL---IISPLQKLENGNYIMDYEDIENKIKD-V-----KLFILCNPHNPVGRVWTKDELKKLGDIC 193 (391)
T ss_dssp CCTHHHHHHHHTTCEE---EECCCEECTTSCEECCHHHHHHHCTT-E-----EEEEEESSBTTTTBCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCeE---EeeeeeecCCCceEeeHHHHHHHhhc-C-----CEEEEECCCCCCCcCcCHHHHHHHHHHH
Confidence 5678888999999877 899987 3457999999999975 2 234556689999999 78888765
Q ss_pred ---CCCceeccccccc-cc-----e------------eeeecCCCccc-ccccccc------c----cC----CcccCCC
Q psy13453 91 ---NGPLKVGGVLRRV-YS-----S------------CLVPRGQKSLR-TTVLFHF------L----FQ----HWQIPLG 134 (764)
Q Consensus 91 ---~~wlHVDa~l~~~-y~-----s------------~ll~rd~~~l~-~~~s~~~------d----~~----d~tle~S 134 (764)
++++++|.+.... +. + +++..-.+.+- ..+...+ + +. .++..+.
T Consensus 194 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (391)
T 4dq6_A 194 LKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRIDIKRN 273 (391)
T ss_dssp HHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTCCCC
T ss_pred HHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHHHHhhcCCCC
Confidence 8999999964211 00 0 11111111110 0000000 0 00 0111111
Q ss_pred CcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEeCCCCceeEE-EEeeccccccccccccCccCCc
Q psy13453 135 RRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQ-DDRFELVCPPSMGLVC-FRLKVRFWDKLDNLFGTISFGD 212 (764)
Q Consensus 135 Rr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~-~p~~ell~~P~l~iV~-Fry~P~~~~~~~~~~~~~~~~~ 212 (764)
-......+.+++.. +.+.+.++.++..+.++++.+.|++ .|+++++. |+-+.+. +++...+ .
T Consensus 274 ~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~--------------~ 337 (391)
T 4dq6_A 274 NCFSLVATEASYNN-GESWLESFLEYLESNIDFAIKYINENMPKLKVRK-PEGTYLLWVDFSALG--------------L 337 (391)
T ss_dssp CHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECC-CSBSSEEEEECGGGC--------------C
T ss_pred CHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecC-CCccEEEEEEhhhcC--------------C
Confidence 11122233344443 5566788888999999999999998 79999765 4444444 4442100 1
Q ss_pred cHHHHHHHHHHHhc-CcEEEEecee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 213 NDLNKAVYDRIIAR-KVIYIVKGSF--QDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 213 d~~n~~L~~~L~~~-G~~~vs~t~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
+ ..++.++|.++ |......... .+..++|+++. +++++++.+++.|+++
T Consensus 338 ~--~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~i~~~l~~l~~~ 389 (391)
T 4dq6_A 338 S--DEELESILVQKGKVALNQGNSFGIGGSGYQRINLA---CPRSMLEEALIRIKNA 389 (391)
T ss_dssp C--HHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC---SCHHHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc---CCHHHHHHHHHHHHHH
Confidence 1 24688888888 8755443333 23578999877 5789999999988775
No 294
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=98.28 E-value=4.6e-06 Score=91.38 Aligned_cols=218 Identities=12% Similarity=0.041 Sum_probs=136.6
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC-CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD-SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~-~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
.|.++.+++...|... +.||+++ ++.+|+++|+++|++. +-+|. .+.++|.+.|++++++ +++
T Consensus 112 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~--~~n~tG~~~~l~~i~~l~~~~~~~ 180 (399)
T 2oga_A 112 TYIASWLAVSATGATP---VPVEPHEDHPTLDPLLVEKAITPR------TRALL--PVHLYGHPADMDALRELADRHGLH 180 (399)
T ss_dssp SCTHHHHHHHHTTCEE---EEECBCSSSSSBCHHHHHHHCCTT------EEEEC--CBCGGGCCCCHHHHHHHHHHHTCE
T ss_pred ccHHHHHHHHHCCCEE---EEEecCCCCCCcCHHHHHHhcCCC------CeEEE--EeCCcCCccCHHHHHHHHHHcCCE
Confidence 5778889999999876 8999986 6899999999999742 22321 4678999999999886 899
Q ss_pred ceeccccccc--c--------ceeeeecC--CCcccc----ccccc--cc----------c------CCcccCCCCcccH
Q psy13453 94 LKVGGVLRRV--Y--------SSCLVPRG--QKSLRT----TVLFH--FL----------F------QHWQIPLGRRFRA 139 (764)
Q Consensus 94 lHVDa~l~~~--y--------~s~ll~rd--~~~l~~----~~s~~--~d----------~------~d~tle~SRr~~A 139 (764)
+++|++.... + +-++.+.- .+.+.. .+-.. .+ . ......++.+...
T Consensus 181 li~Dea~~~g~~~~~~~~~~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~ 260 (399)
T 2oga_A 181 IVEDAAQAHGARYRGRRIGAGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDE 260 (399)
T ss_dssp ECEECTTCTTCEETTEETTCTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCH
T ss_pred EEEECcccccCccCCeecccccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCH
Confidence 9999954211 1 11111110 111111 00000 00 0 0001122235567
Q ss_pred HHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCcee---EEEEeeccccccccccccCccCCccHHH
Q psy13453 140 LKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGL---VCFRLKVRFWDKLDNLFGTISFGDNDLN 216 (764)
Q Consensus 140 LklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~i---V~Fry~P~~~~~~~~~~~~~~~~~d~~n 216 (764)
+..|+.+..+ +.+.++.++..++++++.+.|++.+++++...|+-.. +.|.... .+ .
T Consensus 261 ~~~a~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~----------------~~--~ 320 (399)
T 2oga_A 261 MQAAVLRIRL--AHLDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRT----------------ER--R 320 (399)
T ss_dssp HHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEEC----------------SS--H
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEEC----------------CC--H
Confidence 7777766543 4466778888899999999999999988766554322 1233210 01 2
Q ss_pred HHHHHHHHhcCcEEEEec--eeC--------C-------------eeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 217 KAVYDRIIARKVIYIVKG--SFQ--------D-------------RLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 217 ~~L~~~L~~~G~~~vs~t--~l~--------g-------------~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
.++.++|.++|....... ..+ + ..++|++ .++.+++++++.+++.|+++.++
T Consensus 321 ~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~-~~~~~t~edi~~~~~~l~~~~~~ 395 (399)
T 2oga_A 321 DELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLP-IGPHLERPQALRVIDAVREWAER 395 (399)
T ss_dssp HHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEEC-CSTTCCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEcc-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 467888888887543211 100 0 2579995 66778999999999999987654
No 295
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=98.28 E-value=1.5e-05 Score=87.29 Aligned_cols=234 Identities=9% Similarity=0.017 Sum_probs=133.1
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
.|.++..++...|... +.+|+++++.+|+++|+++|++.. +++-+++.+- ++|..+|++++++ ++++
T Consensus 81 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~i~~~~--~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~l 152 (394)
T 1o69_A 81 TFIASVAPICYLKAKP---VFIDCDETYNIDVDLLKLAIKECE--KKPKALILTH---LYGNAAKMDEIVEICKENDIVL 152 (394)
T ss_dssp SCGGGTHHHHHTTCEE---EEECBCTTSSBCHHHHHHHHHHCS--SCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEE
T ss_pred ccHHHHHHHHHcCCEE---EEEEeCCCCCcCHHHHHHHHhccc--CCceEEEEEC---CCCChhhHHHHHHHHHHcCCEE
Confidence 5778888999999876 999999889999999999998631 1222443322 7899999999886 8899
Q ss_pred eecccccc--cc--------------------------ceeeeecCCCccccccccccccC----C-c-ccCCCC--ccc
Q psy13453 95 KVGGVLRR--VY--------------------------SSCLVPRGQKSLRTTVLFHFLFQ----H-W-QIPLGR--RFR 138 (764)
Q Consensus 95 HVDa~l~~--~y--------------------------~s~ll~rd~~~l~~~~s~~~d~~----d-~-tle~SR--r~~ 138 (764)
++|++... .+ +++++.++++.... +.....+. . + ..+.+. +..
T Consensus 153 i~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~-l~~~~~~~~~~~~~~~~~~~g~~~~~~ 231 (394)
T 1o69_A 153 IEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKNKEKIEK-ARFYSTQARENCLHYEHLDYGYNYRLS 231 (394)
T ss_dssp EEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHH-HHHHTBTCCCSSSSCCCSSCCCBCBCC
T ss_pred EEECcCcccceeCCcccccccCcEEEEEeCCccCCCCCceEEEECCHHHHHH-HHHHHHhccccCccccccccCcccCcC
Confidence 99995421 01 01222222111000 00000000 0 0 001111 223
Q ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC-----CceeEEEEeecccc----ccccccccCcc
Q psy13453 139 ALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP-----SMGLVCFRLKVRFW----DKLDNLFGTIS 209 (764)
Q Consensus 139 ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P-----~l~iV~Fry~P~~~----~~~~~~~~~~~ 209 (764)
.+...+.+.. .+-+.+.+++..++++++.+.|++. +++..++ .+.+++|++.+... .+.........
T Consensus 232 ~~~aa~~l~~--l~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 307 (394)
T 1o69_A 232 NVLGAIGVAQ--MEVLEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKN 307 (394)
T ss_dssp HHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCC
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhccccccccccccccc
Confidence 3433343333 3457788999999999999999987 7766543 23367777642100 00000000000
Q ss_pred CCccHHHHHHHHHHHhcCcEEEEe-------ceeCC-------------eeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 210 FGDNDLNKAVYDRIIARKVIYIVK-------GSFQD-------------RLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 210 ~~~d~~n~~L~~~L~~~G~~~vs~-------t~l~g-------------~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
+....-..++.+.|.+.|...... ..++. ...+|+. +++.+++++++.+++.|+++.
T Consensus 308 ~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~t~edi~~~~~~l~~~~ 384 (394)
T 1o69_A 308 ITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLP-SGTAMSKDDVYEISKLILKSI 384 (394)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEEC-CCTTCCHHHHHHHHHHHHHHH
T ss_pred cccccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEcc-CCCCCCHHHHHHHHHHHHHHH
Confidence 000111357888998888743222 01111 0345554 489999999999999998764
No 296
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=98.28 E-value=7.3e-06 Score=89.61 Aligned_cols=212 Identities=8% Similarity=-0.064 Sum_probs=128.3
Q ss_pred HHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc--CCCceecccccc
Q psy13453 25 FKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS--NGPLKVGGVLRR 102 (764)
Q Consensus 25 ~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~--~~wlHVDa~l~~ 102 (764)
.+.+..++++. .++.||++.....|. + +++ ++-+++.+.+++++|.+.|++++.+ ++|+|+|++...
T Consensus 135 ~~~~~~~~~g~-~~~~v~~~~g~~~~~-~----i~~-----~~~~v~~~~~~nptG~~~~~~~i~~~~~~~vivD~a~~~ 203 (398)
T 2fyf_A 135 ASAVSKNPFVG-EPIIITSDPGSAPEP-Q----TDP-----SVDVIAWAHNETSTGVAVAVRRPEGSDDALVVIDATSGA 203 (398)
T ss_dssp HHHHHHCTTSC-CCEEEECCTTCCCCC-C----CCT-----TCSEEEEESEETTTTEECCCCCCTTCC-CEEEEECTTTT
T ss_pred HHHHHHhCCCC-ceEEEecCCCCCCCc-c----ccC-----CCCEEEEeCcCCCcceecchHHhhhhcCCeEEEEecccc
Confidence 34566663332 248899984333332 1 221 2234456678999999999999987 899999995310
Q ss_pred ------------------c-c-----ceeeeecCCCcccccccc-----c--cccCC-----------cccCCCC-cccH
Q psy13453 103 ------------------V-Y-----SSCLVPRGQKSLRTTVLF-----H--FLFQH-----------WQIPLGR-RFRA 139 (764)
Q Consensus 103 ------------------~-y-----~s~ll~rd~~~l~~~~s~-----~--~d~~d-----------~tle~SR-r~~A 139 (764)
+ + .++++.++ +.+.. +.. . ..+.+ ++. ++- ....
T Consensus 204 ~~~~~~~~~~di~~~s~sK~~~~~gg~g~l~~~~-~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~t~~~~~~ 280 (398)
T 2fyf_A 204 GGLPVDIAETDAYYFAPQKNFASDGGLWLAIMSP-AALSR-IEAIAATGRWVPDFLSLPIAVENSLKNQTY-NTPAIATL 280 (398)
T ss_dssp TTSCCCGGGCSEEEECTTSTTCSCSSEEEEEECH-HHHHH-HHHHHHTTCCCCGGGCHHHHHHHHTTTCCS-SCCCHHHH
T ss_pred CCcccCcccCcEEEEecCcccCCCCceEEEEECH-HHHHH-hhcccccCCCCCcEEehHHHhhhcccCCCC-CCCCHHHH
Confidence 0 0 01222221 11000 000 0 00010 111 111 1122
Q ss_pred HHHHHHHHHccHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEeC-CC--Cce-eEEEEeeccccccccccccCccCCccH
Q psy13453 140 LKLWMTLRSYGLKG-LQAYLRKHISLAKKFADLVEQDDRFELVC-PP--SMG-LVCFRLKVRFWDKLDNLFGTISFGDND 214 (764)
Q Consensus 140 LklWatL~~lG~eG-y~~~i~~~i~lA~~l~~~I~~~p~~ell~-~P--~l~-iV~Fry~P~~~~~~~~~~~~~~~~~d~ 214 (764)
..+.++++.+..+| +.++.++..++++++.+.|++.++++++. +| ..+ +++|++.+ +.+
T Consensus 281 ~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~---------------~~~- 344 (398)
T 2fyf_A 281 ALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVD---------------DVD- 344 (398)
T ss_dssp HHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECT---------------TSC-
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCC---------------CCC-
Confidence 35677888777777 99999999999999999999999999875 34 356 78887631 111
Q ss_pred HHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 215 LNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 215 ~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
..++.++|.++|..+......-+..++|+++.. .+++++++.+++.|+++.+
T Consensus 345 -~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~-~~t~e~i~~~~~~l~~~l~ 396 (398)
T 2fyf_A 345 -AGTVAKILRANGIVDTEPYRKLGRNQLRVAMFP-AVEPDDVSALTECVDWVVE 396 (398)
T ss_dssp -HHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCT-TSCHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHCCcEEecCcccCCCCEEEEEecC-CCCHHHHHHHHHHHHHHHH
Confidence 246888888888754322111124689998765 6679999999999988754
No 297
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=98.27 E-value=1.5e-05 Score=88.20 Aligned_cols=225 Identities=10% Similarity=0.015 Sum_probs=138.9
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
.|.|+..+++..|... +.+| .+|+++|+++|++... +++-+++-+....++|.+.|++++.+ ++|+
T Consensus 157 ~h~~~~~~~~~~g~~~---~~~~-----~~d~~~le~~l~~~~~-~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~l 227 (427)
T 2w8t_A 157 SHASIYDGCQQGNAEI---VRFR-----HNSVEDLDKRLGRLPK-EPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMV 227 (427)
T ss_dssp CCHHHHHHHHHSCSEE---EEEC-----TTCHHHHHHHHHTSCS-SSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEE
T ss_pred ccHHHHHHHHHcCCee---EEeC-----CCCHHHHHHHHHhccC-CCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEE
Confidence 6889999999998755 6666 3799999999986321 13334455566688999999999886 8999
Q ss_pred eeccccccc-cc----e------------eeeecCCCccc--ccccc-ccccC--------CcccCCCCc-ccHHHHHHH
Q psy13453 95 KVGGVLRRV-YS----S------------CLVPRGQKSLR--TTVLF-HFLFQ--------HWQIPLGRR-FRALKLWMT 145 (764)
Q Consensus 95 HVDa~l~~~-y~----s------------~ll~rd~~~l~--~~~s~-~~d~~--------d~tle~SRr-~~ALklWat 145 (764)
++|.+.... ++ + +++..-.+.+- ..+-. ..++. .+...++-. .....+.++
T Consensus 228 i~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~gG~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~a 307 (427)
T 2w8t_A 228 LVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVGGFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTS 307 (427)
T ss_dssp EEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCCEEEEECCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHH
T ss_pred EEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCCCEEEeCHHHHHHHHHhcccccccCCCCHHHHHHHHHH
Confidence 999964211 10 0 00111111110 00000 00000 111112221 122233455
Q ss_pred HHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC-CceeEEEEeeccccccccccccCccCCccHHHHHHHHHHH
Q psy13453 146 LRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP-SMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRII 224 (764)
Q Consensus 146 L~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P-~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~ 224 (764)
|+.+- .+.++.++..++++++.+.|++. ++++..++ ..+++.|++.. .....++.++|.
T Consensus 308 l~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-----------------~~~~~~l~~~L~ 367 (427)
T 2w8t_A 308 IRKLM--TAHEKRERLWSNARALHGGLKAM-GFRLGTETCDSAIVAVMLED-----------------QEQAAMMWQALL 367 (427)
T ss_dssp HHHHT--SCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCSSEEEEEESS-----------------HHHHHHHHHHHH
T ss_pred HHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCCCEEEEEECC-----------------HHHHHHHHHHHH
Confidence 55543 24678888889999999999987 88887566 67788776521 112357889999
Q ss_pred hcCcEEEEecee---CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHccC
Q psy13453 225 ARKVIYIVKGSF---QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLRGK 274 (764)
Q Consensus 225 ~~G~~~vs~t~l---~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~~~ 274 (764)
++|..+...... .+..++|+++.. .+++++++.+++.|+++.+++.+..
T Consensus 368 ~~Gi~v~~~~~~~~~~~~~~lRi~~~~-~~t~e~i~~~~~~l~~~l~~~~~~~ 419 (427)
T 2w8t_A 368 DGGLYVNMARPPATPAGTFLLRCSICA-EHTPAQIQTVLGMFQAAGRAVGVIG 419 (427)
T ss_dssp HTTEECEEECTTTSCTTCEEEEEECCT-TCCHHHHHHHHHHHHHHHHHHTCC-
T ss_pred HCCeEEeeeCCCCCCCCCeEEEEEeCC-CCCHHHHHHHHHHHHHHHHHhCccc
Confidence 998754433211 234689997654 4578999999999999887764433
No 298
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=98.24 E-value=5.6e-06 Score=91.69 Aligned_cols=227 Identities=13% Similarity=0.017 Sum_probs=140.0
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC--CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP--DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS---- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd--~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~---- 90 (764)
.+.+...++...|+.. +.+|++ .++.+|+++|+++|++. +.+++-+-++.++|.+-| ++++++
T Consensus 151 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 222 (427)
T 3dyd_A 151 GFSLYKTLAESMGIEV---KLYNLLPEKSWEIDLKQLEYLIDEK-----TACLIVNNPSNPCGSVFSKRHLQKILAVAAR 222 (427)
T ss_dssp CCTHHHHHHHHTTCEE---EEEEEEGGGTTEECHHHHHSSCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHcCCEE---EEEecccccCCCCCHHHHHHHhccC-----CCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
Confidence 3456778889999877 888886 46789999999998652 234455566889999988 777665
Q ss_pred -CCCceeccccccc------cce---------ee-eecCCCc--cccccccccccC-C---------------c--ccCC
Q psy13453 91 -NGPLKVGGVLRRV------YSS---------CL-VPRGQKS--LRTTVLFHFLFQ-H---------------W--QIPL 133 (764)
Q Consensus 91 -~~wlHVDa~l~~~------y~s---------~l-l~rd~~~--l~~~~s~~~d~~-d---------------~--tle~ 133 (764)
++++++|.+.... +.+ ++ +..-.+. +.+ +...+-.. + . ..-+
T Consensus 223 ~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G-~riG~~~~~~~~~~~~~~i~~~l~~~~~~~~~ 301 (427)
T 3dyd_A 223 QCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPG-WRLGWILIHDRRDIFGNEIRDGLVKLSQRILG 301 (427)
T ss_dssp TTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGG-GCCEEEEEECSTTSSHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcC-cceEEEEecCcchhhHHHHHHHHHHHHhccCC
Confidence 8899999853211 100 01 0000110 000 00000000 0 0 0001
Q ss_pred CCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCcc
Q psy13453 134 GRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDN 213 (764)
Q Consensus 134 SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d 213 (764)
.-......+..+|.....+.+.++.++..+.++++.+.|+++|+++++.+.....+.++....... ...+
T Consensus 302 ~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~~~~~~l~~~~~~----------~~~~ 371 (427)
T 3dyd_A 302 PCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFP----------EFEN 371 (427)
T ss_dssp SCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTEEEEEECGGGCT----------TCSS
T ss_pred CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEecCHhhcC----------CCCC
Confidence 111222233444555568889999999999999999999999999876554444444444311000 0011
Q ss_pred HHHHHHHHHHH-hcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 214 DLNKAVYDRII-ARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 214 ~~n~~L~~~L~-~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
..++.++|. +.|.++..........++|++++ +++++++.+++.|.++.+++
T Consensus 372 --~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~---~~~e~i~~~l~~l~~~l~~~ 424 (427)
T 3dyd_A 372 --DVEFTERLVAEQSVHCLPATCFEYPNFIRVVIT---VPEVMMLEACSRIQEFCEQH 424 (427)
T ss_dssp --HHHHHHHHHHHHCEECEEGGGGTCTTEEEEESC---SCHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHCCEEEECCcccCCCCeEEEEEC---CCHHHHHHHHHHHHHHHHHh
Confidence 245677775 67876665555555679999875 67899999999999887664
No 299
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=98.22 E-value=7.1e-06 Score=89.41 Aligned_cols=223 Identities=10% Similarity=0.027 Sum_probs=133.7
Q ss_pred HHHHHhhcCCCCCCeEEecCCCC---------CcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc-
Q psy13453 24 SFKATHSLSGTPDQVRLSGLPDS---------EWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS- 90 (764)
Q Consensus 24 v~KAa~~LGl~~~~v~~Vpvd~~---------~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~- 90 (764)
+.+.+...|++. .++.+|++.. +.+|+++|+++|++. ++-+++.+...+++|.+-| ++++++
T Consensus 89 ~~~~~~~~g~~~-~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~----~~~~v~~~~~~~~~G~~~~~~~l~~i~~~ 163 (379)
T 3ke3_A 89 WTQILEKGKFAK-SSTVLTAERTEDTEAPKPFAPVDIETAVAKIKED----KSAIVYAPHVETSSGIILSEEYIKALSEA 163 (379)
T ss_dssp HHHHHHHHCCSS-EEEEEECEESSCCSSCCCEECCCHHHHHHHHHHH----TCSEEEEESEETTTTEECCHHHHHHHHHH
T ss_pred HHHHHHHhCCCC-ceEEEeccccccccccCCCCCCCHHHHHHHHhhc----CCcEEEEEeecCCCceeCCHHHHHHHHHH
Confidence 445666777643 3467777542 269999999999753 1224456778889999999 888775
Q ss_pred ----CCCceeccccc-------------------cc-cc-----eeeeecCCC--cccc--ccccccccCCcc-----c-
Q psy13453 91 ----NGPLKVGGVLR-------------------RV-YS-----SCLVPRGQK--SLRT--TVLFHFLFQHWQ-----I- 131 (764)
Q Consensus 91 ----~~wlHVDa~l~-------------------~~-y~-----s~ll~rd~~--~l~~--~~s~~~d~~d~t-----l- 131 (764)
++++|+|+... ++ ++ ++++.++.- .+.. ..+..+++..|. .
T Consensus 164 ~~~~~~~li~D~~~~g~~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 243 (379)
T 3ke3_A 164 VHSVGGLLVIDCIASGCVWLDMKELGIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYE 243 (379)
T ss_dssp HHHTTCEEEEECTTCTTCCCCHHHHTCSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHH
T ss_pred HHHcCCEEEEEecccCCccccccccCCCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhh
Confidence 89999997521 11 00 233322210 0000 000000000000 0
Q ss_pred CCCCc------c-cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC--ceeEEEEeecccccccc
Q psy13453 132 PLGRR------F-RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS--MGLVCFRLKVRFWDKLD 202 (764)
Q Consensus 132 e~SRr------~-~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~--l~iV~Fry~P~~~~~~~ 202 (764)
.++|. . ....+-+++..+-.+|+.++.++..++++++.+.|++. +++++.++. .+++.+...+
T Consensus 244 ~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~~~~------- 315 (379)
T 3ke3_A 244 NGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGFEAPGVVVSYTE------- 315 (379)
T ss_dssp TTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEEEEECS-------
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccccCceEEEEccC-------
Confidence 12221 1 11244566777778889999999999999999999987 888877653 4434332211
Q ss_pred ccccCccCCccHHHHHHHHHHHhcCcEEEEece-----eCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 203 NLFGTISFGDNDLNKAVYDRIIARKVIYIVKGS-----FQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 203 ~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~-----l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
+ . .....+.|.++|........ ..+...+|++++.. +++++|+.+++.|+++.+++.
T Consensus 316 --------~-~--~~~~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~-~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 316 --------R-D--DMHKGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGL-DKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp --------C-H--HHHSSHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSH-HHHTCHHHHHHHHHHHHHHHH
T ss_pred --------C-c--chHHHHHHHHCCeEEeCCccccccccCcCCEEEEeCCcC-CCHHHHHHHHHHHHHHHHHhc
Confidence 1 1 11225667788875433321 11246899976544 478999999999999887764
No 300
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=98.21 E-value=5.1e-06 Score=99.41 Aligned_cols=236 Identities=9% Similarity=-0.078 Sum_probs=142.3
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCC-----Ccc-----cHHHHHHHHHHH--h--hCCCCc-EEEEeeCCcccccccC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDS-----EWL-----AYLTLRTIYESF--R--KSFLCP-MCSGYCGRTLHQDIQS 84 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~-----~rm-----D~~aLe~~I~~~--~--~~G~~p-~~VatAGTT~~G~iDp 84 (764)
.|+|+..++.+.|... +.+|++.+ +.+ |+++|+++|+++ . +.|.+| +++.+.+ +++|.+.|
T Consensus 254 ~h~s~~~~~~~~G~~~---v~v~~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d 329 (755)
T 2vyc_A 254 CHKSIEQGLMLTGAKP---VYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN 329 (755)
T ss_dssp CCHHHHHHHHHHCCEE---EEECCCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC
T ss_pred chHHHHHHHHHcCCEE---EEEeCCCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC
Confidence 6999999999999877 88888643 346 999999999874 1 245555 4456667 57999999
Q ss_pred chhhhc-----CCCceecccccc--ccc-------ee-------------eeecCCCccccc--cc-ccc--c--cCCc-
Q psy13453 85 LNAPVS-----NGPLKVGGVLRR--VYS-------SC-------------LVPRGQKSLRTT--VL-FHF--L--FQHW- 129 (764)
Q Consensus 85 i~~ia~-----~~wlHVDa~l~~--~y~-------s~-------------ll~rd~~~l~~~--~s-~~~--d--~~d~- 129 (764)
++++++ ++++|||+++.. .+. .+ +...-.+.+..- .+ ... + +.+.
T Consensus 330 l~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~ 409 (755)
T 2vyc_A 330 AKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFS 409 (755)
T ss_dssp HHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHH
T ss_pred HHHHHHHHHHcCCEEEEECcCchhcccCcccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHH
Confidence 999886 889999997531 111 00 111111111100 00 000 0 0000
Q ss_pred -------ccCCCCc--ccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCC---------eEEeCCCCc-----
Q psy13453 130 -------QIPLGRR--FRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDR---------FELVCPPSM----- 186 (764)
Q Consensus 130 -------tle~SRr--~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~---------~ell~~P~l----- 186 (764)
.++.+-. .....+-++++.+-.+|..+++++.+++++++++.|+++++ |++++++..
T Consensus 410 ~~~~~~~~~~s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (755)
T 2vyc_A 410 RFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQT 489 (755)
T ss_dssp HHHHHHHHTSCSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTT
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhcccccc
Confidence 1111111 11124455666666676788999999999999999999888 888886532
Q ss_pred --------------------------------------------eeEEEEeeccccccccccccCccCCccHHHHHHHHH
Q psy13453 187 --------------------------------------------GLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDR 222 (764)
Q Consensus 187 --------------------------------------------~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~ 222 (764)
..|.|...+-+..+. -...+.+ ...+.+.
T Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~-----~~~~g~~--~~~l~~~ 562 (755)
T 2vyc_A 490 GKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGE-----LEETGVP--AALVTAW 562 (755)
T ss_dssp CCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSS-----BCSSCCC--HHHHHHH
T ss_pred ccccccccccchhccchhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCCC-----ccccCCc--HHHHHHH
Confidence 123332211000000 0000111 1467777
Q ss_pred HHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 223 IIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 223 L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
|.+.|.. . ...+...+|+ +.++.+|+++++.+++.|+++.+...
T Consensus 563 L~~~gI~---~-e~~~~~~v~~-~~~~g~t~~~~~~l~~al~~~~~~~~ 606 (755)
T 2vyc_A 563 LGRHGIV---P-TRTTDFQIMF-LFSMGVTRGKWGTLVNTLCSFKRHYD 606 (755)
T ss_dssp HHTTTCC---C-SEECSSEEEE-ECCTTCCTTTTHHHHHHHHHHHHHHH
T ss_pred HHHCCCE---E-eecCCCeEEE-EECCCCCHHHHHHHHHHHHHHHHhhh
Confidence 8777752 1 2224567887 45677799999999999999987653
No 301
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=98.19 E-value=2e-05 Score=84.22 Aligned_cols=215 Identities=9% Similarity=-0.026 Sum_probs=134.1
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-------CC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-------NG 92 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-------~~ 92 (764)
.|.++..+++..|... +.+|+++++.+|+++|+++|++. .++-+++-+.++.++|.+=|++++.+ ++
T Consensus 101 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~d~~~l~~~l~~~---~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~ 174 (354)
T 3ly1_A 101 TYGDGEHFAKIAGMKV---TKVKMLDNWAFDIEGLKAAVAAY---SGPSIVYLVNPNNPTGTITPADVIEPWIASKPANT 174 (354)
T ss_dssp SCTHHHHHHHHTTCEE---EEECCCTTSCCCHHHHHHHHHTC---SSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTE
T ss_pred CchHHHHHHHHcCCEE---EEecCCCCCCCCHHHHHHHhccC---CCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCe
Confidence 5678889999999877 99999988999999999999831 12224445778999999977776443 67
Q ss_pred Cceeccccccc-cc----e------------eeeecCCCccc-ccccccc-----c----cCCcccCCCCcccHHHHHHH
Q psy13453 93 PLKVGGVLRRV-YS----S------------CLVPRGQKSLR-TTVLFHF-----L----FQHWQIPLGRRFRALKLWMT 145 (764)
Q Consensus 93 wlHVDa~l~~~-y~----s------------~ll~rd~~~l~-~~~s~~~-----d----~~d~tle~SRr~~ALklWat 145 (764)
++++|...... +. + +++..-.+.+- ..+...+ + +....-.+ ....+..+++
T Consensus 175 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~ 252 (354)
T 3ly1_A 175 MFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYVAGE--KINFSGVDAA 252 (354)
T ss_dssp EEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGGTTCS--CCCHHHHHHH
T ss_pred EEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHHHHHHhcCCC--CCCHHHHHHH
Confidence 89999864211 00 0 11111111111 0000000 0 00000001 2334444444
Q ss_pred HHHcc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHH
Q psy13453 146 LRSYG-LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRII 224 (764)
Q Consensus 146 L~~lG-~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~ 224 (764)
...+- .+.+.++.++..+.++++.+.+++. ++++. ++.-+.+.+++. . + ..++.+.|.
T Consensus 253 ~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~-~~~~~~~~~~~~----------------~-~--~~~~~~~l~ 311 (354)
T 3ly1_A 253 LASMNDSAFITYSKKSNDVSRQILLKALEDL-KLPYL-PSEGNFVFHQLV----------------V-P--LKDYQTHMA 311 (354)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCCSSEEEEECS----------------S-C--HHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCCceEEEEECC----------------C-C--HHHHHHHHH
Confidence 44442 2667888888899999999999987 77765 455555666542 1 1 246788888
Q ss_pred hcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 225 ARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 225 ~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
+.|.... .....+..++|+++. ++++++.+++.|+++.+
T Consensus 312 ~~gi~v~-g~~~~~~~~iRis~~----~~~~i~~~~~~l~~~l~ 350 (354)
T 3ly1_A 312 DAGVLIG-RAFPPADNWCRISLG----TPQEMQWVADTMREFRK 350 (354)
T ss_dssp HTTEECC-CCCTTCTTEEEEECC----CHHHHHHHHHHHHHHHH
T ss_pred HCCEEEe-ecCCCCCCEEEEEcC----CHHHHHHHHHHHHHHHH
Confidence 8887543 222234678999865 68999999999988753
No 302
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=98.19 E-value=1.3e-05 Score=86.43 Aligned_cols=222 Identities=9% Similarity=0.048 Sum_probs=131.2
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC--CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP--DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS---- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd--~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~---- 90 (764)
.|.+...++..+|... +.||++ ..+.+|+++|+++|+++ +-+++-+.+..++|.+-| ++++++
T Consensus 114 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~d~~~l~~~l~~~-----~~~v~~~~~~nptG~~~~~~~l~~i~~la~~ 185 (375)
T 3op7_A 114 TYQQLYDIPKSLGAEV---DLWQIEEENGWLPDLEKLRQLIRPT-----TKMICINNANNPTGAVMDRTYLEELVEIASE 185 (375)
T ss_dssp SCTHHHHHHHHTTCEE---EEEEEEGGGTTEECHHHHHHHCCTT-----CCEEEEESSCTTTCCCCCHHHHHHHHHHHHT
T ss_pred CchhHHHHHHHcCCEE---EEEeccccCCCCCCHHHHHHhhccC-----CeEEEEcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 4567888899999877 889987 35679999999999742 235556678899999999 777665
Q ss_pred -CCCceeccccccc----cc--------eeeeecCCCccc-ccccccc-----c----cCCcccCCCCcccHHHHHHHHH
Q psy13453 91 -NGPLKVGGVLRRV----YS--------SCLVPRGQKSLR-TTVLFHF-----L----FQHWQIPLGRRFRALKLWMTLR 147 (764)
Q Consensus 91 -~~wlHVDa~l~~~----y~--------s~ll~rd~~~l~-~~~s~~~-----d----~~d~tle~SRr~~ALklWatL~ 147 (764)
++++++|.+.... .. .+.+..-.+.+- ..+...+ + +....-..+-....+..+++..
T Consensus 186 ~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (375)
T 3op7_A 186 VGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQL 265 (375)
T ss_dssp TTCEEEEECCSCCCSSSCCCCHHHHCTTEEEEEESSSSSSCGGGCCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHHH
T ss_pred cCCEEEEEcccccccccCCCchhhhcCCEEEEeEChhhcCCcccceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHHH
Confidence 8999999864221 00 011111112211 0000000 0 0111000111122333333333
Q ss_pred Hc--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHH-H
Q psy13453 148 SY--GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRI-I 224 (764)
Q Consensus 148 ~l--G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L-~ 224 (764)
.+ ..+.+.++.++.-+.++++.+.+++.++++++.+.....+.+++. . ..+ ..++.+++ .
T Consensus 266 ~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~--~~~~~~~ll~ 328 (375)
T 3op7_A 266 ALAHYQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIA-V--------------DMP--MEDFCLQLLQ 328 (375)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEEC-C--------------SSC--HHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcC-C--------------CCC--HHHHHHHHHH
Confidence 32 234456666666888999999999989998765443333333332 1 111 24566666 5
Q ss_pred hcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 225 ARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 225 ~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
+.|..+..........++|++++.+ .++++.+++.|.++.++
T Consensus 329 ~~gi~v~~g~~~~~~~~iRi~~~~~---~~~i~~~l~~l~~~l~~ 370 (375)
T 3op7_A 329 EHGVLLVPGNRFERDGYVRLGFACE---QETLIKGLEKLSQFLRR 370 (375)
T ss_dssp HHCEECEEGGGGTCTTEEEECCCSC---HHHHHHHHHHHHHHHGG
T ss_pred hCCEEEeChhhhCCCCeEEEEecCC---HHHHHHHHHHHHHHHHH
Confidence 6787665554444467899986653 48999999999887654
No 303
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=98.18 E-value=6.2e-06 Score=89.32 Aligned_cols=218 Identities=13% Similarity=0.054 Sum_probs=129.5
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC---CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc---
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP---DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS--- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd---~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~--- 90 (764)
.|.++.++++..|... +.||++ +++.+|+++|+++|++. +-+++-+.++.++|.+=| ++++++
T Consensus 111 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~~d~~~l~~~l~~~-----~~~v~~~~~~nptG~~~~~~~l~~i~~~~~ 182 (381)
T 1v2d_A 111 FFDVYLPDAFLAGAKA---RLVRLDLTPEGFRLDLSALEKALTPR-----TRALLLNTPMNPTGLVFGERELEAIARLAR 182 (381)
T ss_dssp CCTTHHHHHHHTTCEE---EEEECEEETTEEECCHHHHHTTCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CchhHHHHHHHcCCEE---EEEeCCCCCccCCcCHHHHHHhcCcC-----CEEEEECCCCCCCCCccCHHHHHHHHHHHH
Confidence 5678888999999876 999997 57899999999988532 224455678899999844 666654
Q ss_pred --CCCceeccccccc-c----cee---------eeecCCCccc-cccccccccCCccc---------CCCCcccHHHHHH
Q psy13453 91 --NGPLKVGGVLRRV-Y----SSC---------LVPRGQKSLR-TTVLFHFLFQHWQI---------PLGRRFRALKLWM 144 (764)
Q Consensus 91 --~~wlHVDa~l~~~-y----~s~---------ll~rd~~~l~-~~~s~~~d~~d~tl---------e~SRr~~ALklWa 144 (764)
++++++|.+.... + .++ ++..-.+.+- ..+...+-+.+..+ ..+-....+..++
T Consensus 183 ~~~~~li~De~~~~~~~g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 262 (381)
T 1v2d_A 183 AHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAG 262 (381)
T ss_dssp HTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHH
T ss_pred HcCCEEEEEcCccccccCCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHHhhcccCCCcHHHHH
Confidence 8899999964211 0 010 0000000000 00000000000000 0000112233333
Q ss_pred HHHHc--c--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHH
Q psy13453 145 TLRSY--G--LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVY 220 (764)
Q Consensus 145 tL~~l--G--~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~ 220 (764)
....+ + .+++.++.++..+.++++.+.|++ .+++++.+..-..+.+++. ..+ +.
T Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~----------------~~~-----~~ 320 (381)
T 1v2d_A 263 VAEALKLARREGFYEALREGYRRRRDLLAGGLRA-MGLRVYVPEGTYFLMAELP----------------GWD-----AF 320 (381)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH-TTCCEECCSBSSEEEEECT----------------TCC-----HH
T ss_pred HHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHH-CCCEecCCCcceEEEEecC----------------hHh-----HH
Confidence 32222 2 566788889999999999999998 4888776443334555432 111 56
Q ss_pred HHHHhcCcEEEEeceeC----CeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 221 DRIIARKVIYIVKGSFQ----DRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 221 ~~L~~~G~~~vs~t~l~----g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
+.+.+.|..+....... +..++|+++.. ++++++.+++.|+++.++.
T Consensus 321 ~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~---~~~~i~~~~~~l~~~l~~~ 371 (381)
T 1v2d_A 321 RLVEEARVALIPASAFYLEDPPKDLFRFAFCK---TEEELHLALERLGRVVNSP 371 (381)
T ss_dssp HHHHHTCEECEEGGGGCSSSCCTTEEEEECCS---CHHHHHHHHHHHHHHC---
T ss_pred HHHHhCCEEEecchHhCCCCCCCCEEEEEeCC---CHHHHHHHHHHHHHHHhhc
Confidence 66778887655443332 35689998876 7899999999998876554
No 304
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=98.18 E-value=2.2e-05 Score=86.05 Aligned_cols=228 Identities=9% Similarity=-0.021 Sum_probs=136.0
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC--CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD--SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS---- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~--~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~---- 90 (764)
.|.++..++...|... +.||+++ ++.+|+++|+++|++. +.+++-+-+..++|.+-| ++++++
T Consensus 137 ~y~~~~~~~~~~g~~~---~~v~~~~~~~~~~d~~~l~~~l~~~-----~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 208 (416)
T 1bw0_A 137 GFPHYETVCKAYGIGM---HFYNCRPENDWEADLDEIRRLKDDK-----TKLLIVTNPSNPCGSNFSRKHVEDIVRLAEE 208 (416)
T ss_dssp CCTHHHHHHHHTTCEE---EEEEEEGGGTTEECHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CcHhHHHHHHHcCcEE---EEeecCcccCCCCCHHHHHHHhccC-----CeEEEEeCCCCCCCcccCHHHHHHHHHHHHH
Confidence 3556788899999876 8888874 4789999999998642 234444447889999988 666665
Q ss_pred -CCCceecccccc----------cccee---------e-eecCCCccc-cccccccccC-Cc-----ccC--------CC
Q psy13453 91 -NGPLKVGGVLRR----------VYSSC---------L-VPRGQKSLR-TTVLFHFLFQ-HW-----QIP--------LG 134 (764)
Q Consensus 91 -~~wlHVDa~l~~----------~y~s~---------l-l~rd~~~l~-~~~s~~~d~~-d~-----tle--------~S 134 (764)
++++++|..... .+.++ + +..-.+.+- .-+...+-.. +. .+. .+
T Consensus 209 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (416)
T 1bw0_A 209 LRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLV 288 (416)
T ss_dssp HTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHHHH
T ss_pred cCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHhccc
Confidence 889999996422 11110 0 000011100 0000000000 00 000 00
Q ss_pred CcccHHHH---HHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCC
Q psy13453 135 RRFRALKL---WMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFG 211 (764)
Q Consensus 135 Rr~~ALkl---WatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~ 211 (764)
-....+.. ..+|...+.+++.++.++..+.++++.+.|++.|+++++.+...+.+.+++...... ..
T Consensus 289 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~----------~~ 358 (416)
T 1bw0_A 289 CGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEKYR----------DI 358 (416)
T ss_dssp TCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEEECGGGBS----------SC
T ss_pred cCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCHHHcC----------CC
Confidence 01222322 333444467888999999999999999999998899876543344455555311000 00
Q ss_pred ccHHHHHHHHHHH-hcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 212 DNDLNKAVYDRII-ARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 212 ~d~~n~~L~~~L~-~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
.+ ..++.++|. +.|..+..........++|+++. +++++++..++.|.++.++.
T Consensus 359 ~~--~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~---~~~e~l~~~l~~l~~~l~~~ 413 (416)
T 1bw0_A 359 KT--DVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTT---RPVEVYREAVERIKAFCQRH 413 (416)
T ss_dssp CS--HHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC---SCHHHHHHHHHHHHHHHHHH
T ss_pred CC--HHHHHHHHHHHCCEEEecccccCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHh
Confidence 11 246777774 77876655444433568999884 57889999999998876553
No 305
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=98.18 E-value=6.9e-06 Score=90.60 Aligned_cols=220 Identities=10% Similarity=0.018 Sum_probs=134.2
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC-C--CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc---cCchhhhc---
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP-D--SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI---QSLNAPVS--- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd-~--~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i---Dpi~~ia~--- 90 (764)
.|+++..++..+|... +.+|++ . ++++|+++|+++|++. ++-+++-..+..++|.+ ++++++++
T Consensus 152 ~y~~~~~~~~~~g~~~---~~~~~~~~~~~~~~d~~~le~~i~~~----~~~~vil~~p~nptG~~~~~~~l~~l~~l~~ 224 (421)
T 3l8a_A 152 VYYPFARTIRLNDHRL---VENSLQIINGRFEIDFEQLEKDIIDN----NVKIYLLCSPHNPGGRVWDNDDLIKIAELCK 224 (421)
T ss_dssp CCHHHHHHHHHTTEEE---EEEECEEETTEEECCHHHHHHHHHHT----TEEEEEEESSBTTTTBCCCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHCCCEE---EeccccccCCCeeeCHHHHHHHhhcc----CCeEEEECCCCCCCCCcCCHHHHHHHHHHHH
Confidence 4677888999998876 889986 3 4589999999999842 12244456789999999 88888776
Q ss_pred --CCCceeccccccc------cce------------eeeecCCCccc-cccccc----c--cc--------CCcccCCCC
Q psy13453 91 --NGPLKVGGVLRRV------YSS------------CLVPRGQKSLR-TTVLFH----F--LF--------QHWQIPLGR 135 (764)
Q Consensus 91 --~~wlHVDa~l~~~------y~s------------~ll~rd~~~l~-~~~s~~----~--d~--------~d~tle~SR 135 (764)
++++++|...... +.+ +.+..-.+.+- .-+... . +. ..++..+.-
T Consensus 225 ~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n 304 (421)
T 3l8a_A 225 KHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLANNQHEVP 304 (421)
T ss_dssp HHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTCSCCC
T ss_pred HcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHHhcccCCCC
Confidence 8999999964210 000 01110011110 000000 0 00 011111222
Q ss_pred cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEE-EEeeccccccccccccCccCCccH
Q psy13453 136 RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVC-FRLKVRFWDKLDNLFGTISFGDND 214 (764)
Q Consensus 136 r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~-Fry~P~~~~~~~~~~~~~~~~~d~ 214 (764)
......+.+++.. +.+.+.++.++..++.+++.+.|++.|+++++.+. -+.+. +.+...+. +
T Consensus 305 ~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~-~~~~~~v~~~~~~~------------~--- 367 (421)
T 3l8a_A 305 TVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPE-GTYLVWLDFSAYAI------------A--- 367 (421)
T ss_dssp HHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCS-BSSEEEEECGGGTC------------C---
T ss_pred HHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCC-eeEEEEEeccccCC------------C---
Confidence 2233344455553 67778888899999999999999988899887544 34444 44321100 1
Q ss_pred HHHHHHHHHHh-cCcEEEEecee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 215 LNKAVYDRIIA-RKVIYIVKGSF--QDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 215 ~n~~L~~~L~~-~G~~~vs~t~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
..++.++|.+ .|......... .+..++|+++. +++++++++++.|+++.
T Consensus 368 -~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~---~~~~~i~~~l~~l~~~l 419 (421)
T 3l8a_A 368 -QPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA---TPKNTVQEALSRIISVF 419 (421)
T ss_dssp -TTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec---CCHHHHHHHHHHHHHHH
Confidence 1357777865 47654443322 34578999866 57899999999988764
No 306
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=98.13 E-value=1.2e-05 Score=88.60 Aligned_cols=222 Identities=9% Similarity=-0.008 Sum_probs=135.5
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC-CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD-SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~-~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
.|.++..++...|... +.||+++ ++.+|+++|+++|++. +-+++. +.++|.+.|++++++ +++
T Consensus 91 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~~d~~~l~~~i~~~-----~~~v~~---~~~~G~~~~~~~i~~~~~~~~~~ 159 (418)
T 2c81_A 91 TWIATATAVLNVNALP---VFVDVEADTYCIDPQLIKSAITDK-----TKAIIP---VHLFGSMANMDEINEIAQEHNLF 159 (418)
T ss_dssp SCTHHHHHHHHTTCEE---EEECBCTTTCSBCHHHHGGGCCTT-----EEEECC---BCCTTCCCCHHHHHHHHHHTTCE
T ss_pred ccHhHHHHHHHcCCEE---EEEecCCCCCCcCHHHHHHhhCCC-----CeEEEE---eCCcCCcccHHHHHHHHHHCCCE
Confidence 5788999999999876 9999986 8899999999998642 113322 347899999999886 889
Q ss_pred ceeccccccc--c-----c---------------------eeeeecCCCccccccccccccCC------------c----
Q psy13453 94 LKVGGVLRRV--Y-----S---------------------SCLVPRGQKSLRTTVLFHFLFQH------------W---- 129 (764)
Q Consensus 94 lHVDa~l~~~--y-----~---------------------s~ll~rd~~~l~~~~s~~~d~~d------------~---- 129 (764)
+++|++.... + . ++++.++++.... +.....++. +
T Consensus 160 li~D~a~~~~~~~~~~~~~~~~~~~~~s~s~~K~~~~g~~g~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (418)
T 2c81_A 160 VIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQGKVLTAGEGGIIVTKNPRLFEL-IQQLRADSRVYCDDSSELMHGDMQLV 238 (418)
T ss_dssp EEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHH-HHHHHBTTEEECSCGGGCCTTCBSEE
T ss_pred EEEECcccccCccCCEecccccceEEEeccCCcccCCCCeEEEEECCHHHHHH-HHHHHHhCccccccccccccchhhcc
Confidence 9999953111 1 0 1222211110000 000000000 1
Q ss_pred ---cc-CCCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCc------eeEEEEeeccccc
Q psy13453 130 ---QI-PLGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSM------GLVCFRLKVRFWD 199 (764)
Q Consensus 130 ---tl-e~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l------~iV~Fry~P~~~~ 199 (764)
.+ ....+...+..++.+. ..+++.++.++..++++++.+.|++.|++++..+|+- .+++|++.....
T Consensus 239 ~~~~~~g~~~~~~~~~aa~~~~--~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~- 315 (418)
T 2c81_A 239 KKGDIQGSNYCLSEFQSAILLD--QLQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVKF- 315 (418)
T ss_dssp ECCSSCCCBCCCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGGGT-
T ss_pred ccccccCcCCCcCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEccccc-
Confidence 11 1122344444433332 3456788889999999999999999999999866543 255566531000
Q ss_pred cccccccCccCCccHHHHHHHHHHHhc-CcE---EEEec-eeC--------------------------C---------e
Q psy13453 200 KLDNLFGTISFGDNDLNKAVYDRIIAR-KVI---YIVKG-SFQ--------------------------D---------R 239 (764)
Q Consensus 200 ~~~~~~~~~~~~~d~~n~~L~~~L~~~-G~~---~vs~t-~l~--------------------------g---------~ 239 (764)
.+.+ ..++.+.|.++ |.. .-... .++ + .
T Consensus 316 ----------~~~~--~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (418)
T 2c81_A 316 ----------GGLN--ADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASG 383 (418)
T ss_dssp ----------TTCC--HHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHH
T ss_pred ----------cccC--HHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHh
Confidence 0111 14677888888 875 32211 000 1 1
Q ss_pred eEEEEeccCCCC-CHHHHHHHHHHHHHHHHH
Q psy13453 240 LFMRFAICSSQT-EESDVQLGWNEIRTATEE 269 (764)
Q Consensus 240 ~~LRi~v~np~T-t~e~i~~~l~~l~~~~~~ 269 (764)
..||++ +++.+ ++++++.+++.|+++.++
T Consensus 384 ~~lrl~-~~~~~gt~edi~~~~~~l~~~~~~ 413 (418)
T 2c81_A 384 QSIVIH-HAILLAEPSHLSLLVDAVAELARK 413 (418)
T ss_dssp HEEEEE-GGGGGSCHHHHHHHHHHHHHHHHT
T ss_pred CEEEec-CCccCCCHHHHHHHHHHHHHHHHh
Confidence 489985 66777 999999999999988654
No 307
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=98.13 E-value=1.2e-06 Score=94.86 Aligned_cols=217 Identities=9% Similarity=0.034 Sum_probs=133.6
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC-CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP-DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd-~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
.|.|+..++...|... +.+|++ +++.+|+++|+++|++. +-+|. .+.++|.+.|++++.+ +++
T Consensus 85 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~--~~n~~G~~~~l~~i~~l~~~~~~~ 153 (373)
T 3frk_A 85 TFIATALAVSYTGAKP---IFVEPDIRTYNIDPSLIESAITEK------TKAII--AVHLYGQPADMDEIKRIAKKYNLK 153 (373)
T ss_dssp SCTHHHHHHHHHSCEE---EEECEETTTTEECGGGTGGGCCTT------EEEEE--EECCTTCCCCHHHHHHHHHHHTCE
T ss_pred CcHHHHHHHHHcCCEE---EEEeccccccCcCHHHHHHhcCCC------CeEEE--EECCCcCcccHHHHHHHHHHcCCE
Confidence 6889999999999877 999998 68899999999988652 22322 5568999999999886 899
Q ss_pred ceecccccc--cc-----c---eeeeec--CCCcccc----ccccc--c----------ccC---Ccc-cCCCCcccHHH
Q psy13453 94 LKVGGVLRR--VY-----S---SCLVPR--GQKSLRT----TVLFH--F----------LFQ---HWQ-IPLGRRFRALK 141 (764)
Q Consensus 94 lHVDa~l~~--~y-----~---s~ll~r--d~~~l~~----~~s~~--~----------d~~---d~t-le~SRr~~ALk 141 (764)
+++|++... .+ + -++.+. ..+.+.. .+-.. . ..+ .++ ...+.......
T Consensus 154 li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~ 233 (373)
T 3frk_A 154 LIEDAAQAHGSLYKGMKVGSLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDE 233 (373)
T ss_dssp EEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCH
T ss_pred EEEECCcccCCEECCEeccccccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCH
Confidence 999996321 11 1 111111 0111111 00000 0 000 000 01111222234
Q ss_pred HHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCce---eEEEEeeccccccccccccCccCCccHHHHH
Q psy13453 142 LWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMG---LVCFRLKVRFWDKLDNLFGTISFGDNDLNKA 218 (764)
Q Consensus 142 lWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~---iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~ 218 (764)
+.+++.....+++.++.++..++++++.+.+++.+ +++...+.-. .+.|.... . + ..+
T Consensus 234 ~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~---------------~-~--~~~ 294 (373)
T 3frk_A 234 LQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRS---------------E-K--RDE 294 (373)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEE---------------S-S--HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEe---------------C-C--HHH
Confidence 55555555677888999999999999999999987 7765443321 12232211 0 1 246
Q ss_pred HHHHHHhcCcEEEEec--eeC---------------------CeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 219 VYDRIIARKVIYIVKG--SFQ---------------------DRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 219 L~~~L~~~G~~~vs~t--~l~---------------------g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
+.++|.++|...-... ..+ ....+|+ .+++.+|++|++.+++.|++..
T Consensus 295 l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl-~~~~~~t~~di~~~~~~l~~~~ 365 (373)
T 3frk_A 295 LQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSI-PIWYGMKNEEIEYVIDKINAWK 365 (373)
T ss_dssp HHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEE-CCCTTCCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEc-cCCCCCCHHHHHHHHHHHHHHh
Confidence 8888888887432111 110 0167998 5788889999999999887653
No 308
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=98.12 E-value=9.7e-06 Score=89.50 Aligned_cols=223 Identities=9% Similarity=-0.028 Sum_probs=138.0
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC-CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD-SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~-~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
.|.++..++...|+.. +.||+++ ++.+|+++|+++|++. +-+++.+ .++|.+++++++++ +++
T Consensus 99 ~~~~~~~~~~~~G~~~---~~v~~~~~~~~~d~~~l~~~i~~~-----~~~v~~~---~~tG~~~~l~~i~~la~~~~~~ 167 (424)
T 2po3_A 99 TFAATPHALRWIGLTP---VFADIDPDTGNLDPDQVAAAVTPR-----TSAVVGV---HLWGRPCAADQLRKVADEHGLR 167 (424)
T ss_dssp SCTHHHHHHHHTTCEE---EEECBCTTTSSBCHHHHGGGCCTT-----EEEEEEE---CGGGCCCCHHHHHHHHHHTTCE
T ss_pred ccHHHHHHHHHcCCEE---EEEecCCCcCCcCHHHHHHhhCcC-----CcEEEEE---CCCCCcCCHHHHHHHHHHcCCE
Confidence 5778888999999877 9999986 7899999999988642 1233322 27899999999876 889
Q ss_pred ceecccccc--cc--------c------------------eeeeecCCCccccccccccccC---Ccc---cCCCCcccH
Q psy13453 94 LKVGGVLRR--VY--------S------------------SCLVPRGQKSLRTTVLFHFLFQ---HWQ---IPLGRRFRA 139 (764)
Q Consensus 94 lHVDa~l~~--~y--------~------------------s~ll~rd~~~l~~~~s~~~d~~---d~t---le~SRr~~A 139 (764)
+++|++... .+ + ++++.++++.... +......+ .++ .....+...
T Consensus 168 li~Dea~~~g~~~~~~~~~~~~di~~~S~sk~K~l~~~~~G~~v~~~~~l~~~-l~~~~~~~~~~~~~~~~~g~~~~~~~ 246 (424)
T 2po3_A 168 LYFDAAHALGCAVDGRPAGSLGDAEVFSFHATKAVNAFEGGAVVTDDADLAAR-IRALHNFGFDLPGGSPAGGTNAKMSE 246 (424)
T ss_dssp EEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHH-HHHHHBTTTTCTTCCTTCCCBCCCCH
T ss_pred EEEECccccCCeECCeecccccCEEEEeCCCCCCccCCCCeEEEeCCHHHHHH-HHHHHhcCccccccccccCcCCCcCH
Confidence 999996421 11 0 1111111110000 00000000 111 112235556
Q ss_pred HHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC-----ceeEEEEeeccccccccccccCccCCccH
Q psy13453 140 LKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS-----MGLVCFRLKVRFWDKLDNLFGTISFGDND 214 (764)
Q Consensus 140 LklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~-----l~iV~Fry~P~~~~~~~~~~~~~~~~~d~ 214 (764)
+..++.+.. .+++.++.++..++++++.+.|++.+++++..+|+ ..++.|++.+... +.+
T Consensus 247 ~~aa~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~------------~~~- 311 (424)
T 2po3_A 247 AAAAMGLTS--LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEATT------------GIH- 311 (424)
T ss_dssp HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHH------------SSC-
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCccc------------hhh-
Confidence 666666653 56788889999999999999999999999886443 2456565431000 011
Q ss_pred HHHHHHHHHHhcCcEEEEec--eeC------------CeeE-------EEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 215 LNKAVYDRIIARKVIYIVKG--SFQ------------DRLF-------MRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 215 ~n~~L~~~L~~~G~~~vs~t--~l~------------g~~~-------LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
..++.+.|.+.|....... .++ .+.. ||+. ++..+++++++.+++.|+++.+...
T Consensus 312 -~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~-~~~~~t~e~i~~~~~~L~~~~~~~~ 387 (424)
T 2po3_A 312 -RDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLP-TGTAIGDDDIRRVADLLRLCATRGR 387 (424)
T ss_dssp -HHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEEC-CSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEee-CCCCCCHHHHHHHHHHHHHHHhhhH
Confidence 2467788888887543211 110 0122 5653 5788899999999999988876654
No 309
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=98.12 E-value=6.2e-05 Score=80.42 Aligned_cols=218 Identities=11% Similarity=0.102 Sum_probs=136.6
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchh---hhc-----C
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNA---PVS-----N 91 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~---ia~-----~ 91 (764)
.|.++..++...|... +.+|+++++.+|+++|+++|++ +-+++-+.++.++|.+=|.++ +++ +
T Consensus 107 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~l~~~l~~------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~ 177 (361)
T 3ftb_A 107 SYAEYEINAKKHGVSV---VFSYLDENMCIDYEDIISKIDD------VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKK 177 (361)
T ss_dssp CCTHHHHHHHHTTCEE---EEEECCTTSCCCHHHHHHHTTT------CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHcCCeE---EEeecCcccCCCHHHHHHhccC------CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcC
Confidence 4667888999999877 9999998889999999998864 224556677899999866444 443 8
Q ss_pred CCceecccccc-------ccc-------e-eeeecCCCccc-ccccccccc-CCcc----c---CCCCcccHHHHHHHHH
Q psy13453 92 GPLKVGGVLRR-------VYS-------S-CLVPRGQKSLR-TTVLFHFLF-QHWQ----I---PLGRRFRALKLWMTLR 147 (764)
Q Consensus 92 ~wlHVDa~l~~-------~y~-------s-~ll~rd~~~l~-~~~s~~~d~-~d~t----l---e~SRr~~ALklWatL~ 147 (764)
+++++|.+... ... . +++..-.+.+- ..+...+-. .+.. + ..+-....+..++...
T Consensus 178 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (361)
T 3ftb_A 178 KTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAAIN 257 (361)
T ss_dssp CEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCTTCSCHHHHHHHHH
T ss_pred CEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCCCCCCHHHHHHHHH
Confidence 99999986421 100 0 11111111111 000000000 0000 0 0001334455555544
Q ss_pred Hcc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhc
Q psy13453 148 SYG-LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIAR 226 (764)
Q Consensus 148 ~lG-~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~ 226 (764)
.+- .+.+.++.++..++++++.+.+++.|+++.+.+|.-+.+.|++.. .+ ..++.++|.++
T Consensus 258 ~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~----------------~~--~~~l~~~l~~~ 319 (361)
T 3ftb_A 258 CLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHANFVLCRLEN----------------IS--GEKLYDSLLKE 319 (361)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCSSSEEEEEESS----------------SC--HHHHHHHHHTT
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCeEEEEEcCC----------------CC--HHHHHHHHHHC
Confidence 443 466788888899999999999999999983345566666676531 01 24688889888
Q ss_pred CcEEEEeceeC--CeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 227 KVIYIVKGSFQ--DRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 227 G~~~vs~t~l~--g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
|..+....... +..++|+++. ++++++.+++.++++.+
T Consensus 320 gi~v~~g~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 320 DIVIRRCCNFIGLDDSFVRFAIK----DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp TEECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHHH
T ss_pred CeEEeeCccCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHHh
Confidence 87655443332 3578999865 77888999988887754
No 310
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=98.10 E-value=2.5e-05 Score=85.41 Aligned_cols=222 Identities=9% Similarity=0.042 Sum_probs=136.0
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC--CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCccccccc---Cchhhhc----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD--SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQ---SLNAPVS---- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~--~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iD---pi~~ia~---- 90 (764)
.|.++..++...|... +.||+++ .+.+|+++|+++|++. +-+++-+.++.++|.+= +++++++
T Consensus 134 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~d~~~l~~~l~~~-----~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~ 205 (406)
T 1xi9_A 134 SYPPYTGLVKFYGGKP---VEYRTIEEEDWQPDIDDIRKKITDR-----TKAIAVINPNNPTGALYDKKTLEEILNIAGE 205 (406)
T ss_dssp CCHHHHHHHHHTTCEE---EEEEEEGGGTSEECHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHcCCEE---EEeecCCCcCCcCCHHHHHHhhCcC-----ceEEEEECCCCCCCCCcCHHHHHHHHHHHHH
Confidence 5678889999999876 8899874 5789999999999752 22444556788999873 4666664
Q ss_pred -CCCceeccccccc-c------------ce-ee-eecCCCccc-ccccccccc--CCc----cc----------CCCCcc
Q psy13453 91 -NGPLKVGGVLRRV-Y------------SS-CL-VPRGQKSLR-TTVLFHFLF--QHW----QI----------PLGRRF 137 (764)
Q Consensus 91 -~~wlHVDa~l~~~-y------------~s-~l-l~rd~~~l~-~~~s~~~d~--~d~----tl----------e~SRr~ 137 (764)
++|+++|.+.... + .. .+ +..-.+.+- ..+...+-+ .+. .+ .++ .
T Consensus 206 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~~~~--~ 283 (406)
T 1xi9_A 206 YEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLC--P 283 (406)
T ss_dssp HTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHHHHHHHHHTCC--S
T ss_pred cCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEeccccccCCCccEEEEEEEecCchhHHHHHHHHHHHHHhhcC--C
Confidence 8999999864211 0 00 11 111111111 000000001 110 00 011 1
Q ss_pred cHHHHHHHHHHc--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEE-EeeccccccccccccCccCCccH
Q psy13453 138 RALKLWMTLRSY--GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCF-RLKVRFWDKLDNLFGTISFGDND 214 (764)
Q Consensus 138 ~ALklWatL~~l--G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~F-ry~P~~~~~~~~~~~~~~~~~d~ 214 (764)
..+..++....+ +.+++.++.++..+..+++.+.|++.|+++++ .|+-+.++| ++. ... +.+
T Consensus 284 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~-~~~------------~~~- 348 (406)
T 1xi9_A 284 NTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGISTT-KPQGAFYIFPKIE-VGP------------WKN- 348 (406)
T ss_dssp CSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEECC-CCCBSSEECCEEC-SCS------------CSS-
T ss_pred CHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCeee-cCCeeEEEEEecC-ccC------------CCC-
Confidence 223333333333 56678888899999999999999999899875 455555555 332 100 011
Q ss_pred HHHHHHHHHH-hcCcEEEEeceeC--CeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 215 LNKAVYDRII-ARKVIYIVKGSFQ--DRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 215 ~n~~L~~~L~-~~G~~~vs~t~l~--g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
..++.++|. +.|..+.....+. +..++|+++. +++++++.+++.|.++.+++
T Consensus 349 -~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~---~~~~~i~~~~~~l~~~l~~~ 403 (406)
T 1xi9_A 349 -DKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL---PPIEILEEAMDRFEKFMKER 403 (406)
T ss_dssp -HHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC---SCHHHHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec---CCHHHHHHHHHHHHHHHHHH
Confidence 246777876 7787655443332 2568999886 78999999999998887654
No 311
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=98.10 E-value=4.6e-05 Score=82.96 Aligned_cols=221 Identities=11% Similarity=0.087 Sum_probs=135.5
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCch---hhhc-----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLN---APVS----- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~---~ia~----- 90 (764)
.|.++..++...|... +.+|+++++ +|+++|+++|++. ++-++ +-..+..++|.+=|.+ ++++
T Consensus 124 ~y~~~~~~~~~~g~~~---~~~~~~~~~-~d~~~l~~~l~~~----~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~ 195 (397)
T 2zyj_A 124 SYMGAIQAFRLQGPRF---LTVPAGEEG-PDLDALEEVLKRE----RPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMER 195 (397)
T ss_dssp CCHHHHHHHHTTCCEE---EEEEEETTE-ECHHHHHHHHHHC----CCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCEE---EecCcCCCC-CCHHHHHHHHhhc----CCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHc
Confidence 4567888888888766 889998765 9999999999862 12243 5567788999986655 4443
Q ss_pred CCCceeccccccc-cc-----e-------------eeeecCCCccccccccccccC-------------CcccCCCCccc
Q psy13453 91 NGPLKVGGVLRRV-YS-----S-------------CLVPRGQKSLRTTVLFHFLFQ-------------HWQIPLGRRFR 138 (764)
Q Consensus 91 ~~wlHVDa~l~~~-y~-----s-------------~ll~rd~~~l~~~~s~~~d~~-------------d~tle~SRr~~ 138 (764)
++++++|...... +. + +++..-.+.+-.-+...+-+. .++. ...
T Consensus 196 ~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~----~~~ 271 (397)
T 2zyj_A 196 GLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAHPEALQKLVQAKQGADL----HTP 271 (397)
T ss_dssp TCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTCGGGCCEEEECCHHHHHHHHHHHHHHHS----SCC
T ss_pred CCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEecccccccccceeEEEecCHHHHHHHHHHHHhhcC----CCC
Confidence 8999999965321 10 0 111111111110000000000 0011 113
Q ss_pred HHHHHHHHHHc--cH-HHHHHHHHHHHHHHHHHHHHHhc-CC-CeEEeCCCCceeEEEEeeccccccccccccCccCCcc
Q psy13453 139 ALKLWMTLRSY--GL-KGLQAYLRKHISLAKKFADLVEQ-DD-RFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDN 213 (764)
Q Consensus 139 ALklWatL~~l--G~-eGy~~~i~~~i~lA~~l~~~I~~-~p-~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d 213 (764)
.+..+++...+ +. +.+.++.++..+..+++.+.|++ .| ++++..+.....+.+++.. +.+
T Consensus 272 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~---------------~~~ 336 (397)
T 2zyj_A 272 MLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPK---------------GLS 336 (397)
T ss_dssp HHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBSSEEEEECST---------------TCC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCccEEEEEEcCC---------------CCC
Confidence 33344443333 32 45677777778889999999987 57 6887654444556665421 111
Q ss_pred HHHHHHHHHHHhcCcEEEEecee----CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 214 DLNKAVYDRIIARKVIYIVKGSF----QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 214 ~~n~~L~~~L~~~G~~~vs~t~l----~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
..++.++|.++|..+...... .+..++|+++..+ ++++++++++.|+++.++++
T Consensus 337 --~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~--~~~~i~~~~~~l~~~l~~~~ 394 (397)
T 2zyj_A 337 --AEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYATL--DREGIAEGVRRLGRALKGLL 394 (397)
T ss_dssp --HHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECSSS--CHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcCCC--CHHHHHHHHHHHHHHHHHHH
Confidence 247888888898766544333 1457899998775 89999999999999887764
No 312
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=98.10 E-value=0.00017 Score=79.56 Aligned_cols=234 Identities=8% Similarity=-0.012 Sum_probs=134.5
Q ss_pred eeeeHHHHHh-hcCCCCCCeEEecCCC--CCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccC---chhhhc--
Q psy13453 20 LIYESFKATH-SLSGTPDQVRLSGLPD--SEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQS---LNAPVS-- 90 (764)
Q Consensus 20 ~~YSv~KAa~-~LGl~~~~v~~Vpvd~--~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDp---i~~ia~-- 90 (764)
.|.++..++. ..|... +.+|+++ .+++|+++|+++|++....+..+-+ +-+.++.++|.+=| +.++++
T Consensus 144 ~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~ 220 (435)
T 3piu_A 144 YYPGFDRDLKWRTGVEI---VPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFV 220 (435)
T ss_dssp CCTTHHHHTTTTTCCEE---EEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred ccccHHHHHHHhcCCEE---EEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHH
Confidence 4557777777 678766 8999985 5679999999999986655544544 56668889999844 455543
Q ss_pred ---CCCceecccccc------ccce--------------------eeeecCCCccc-cccccccccC-Cccc----C-CC
Q psy13453 91 ---NGPLKVGGVLRR------VYSS--------------------CLVPRGQKSLR-TTVLFHFLFQ-HWQI----P-LG 134 (764)
Q Consensus 91 ---~~wlHVDa~l~~------~y~s--------------------~ll~rd~~~l~-~~~s~~~d~~-d~tl----e-~S 134 (764)
++++++|.+... .+.+ +++..-.+.+- .-+...+-.. +..+ . ..
T Consensus 221 ~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~ 300 (435)
T 3piu_A 221 EDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMS 300 (435)
T ss_dssp HHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHG
T ss_pred HHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHHh
Confidence 899999996421 1111 11111111110 0000000000 0000 0 00
Q ss_pred C--cccHHHHHHHHHHcc-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccC
Q psy13453 135 R--RFRALKLWMTLRSYG-----LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGT 207 (764)
Q Consensus 135 R--r~~ALklWatL~~lG-----~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~ 207 (764)
+ ....+..++....+. .+.+.++.++..+..+++.+.+++. +++++.+..-..+.+++.. ...
T Consensus 301 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~l~~-~~~-------- 370 (435)
T 3piu_A 301 SFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GISCLNGNAGLFCWVDMRH-LLR-------- 370 (435)
T ss_dssp GGSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEECCCCSSSEEEEECGG-GSS--------
T ss_pred hcCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCeeEEEEEEccc-ccc--------
Confidence 0 112333333222222 2345667777888899999999986 8887654332455555421 100
Q ss_pred ccCCccHHHHHHHHHHHhc-CcEEEEecee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 208 ISFGDNDLNKAVYDRIIAR-KVIYIVKGSF--QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 208 ~~~~~d~~n~~L~~~L~~~-G~~~vs~t~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
.....-..++.++|.++ |..+...... .+..++|+++... ++++++.+++.|+++.+++
T Consensus 371 --~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~--~~e~i~~~l~~l~~~l~~~ 432 (435)
T 3piu_A 371 --SNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANL--PERTLDLAMQRLKAFVGEY 432 (435)
T ss_dssp --SSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSS--CHHHHHHHHHHHHHHHHHH
T ss_pred --cCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCC--CHHHHHHHHHHHHHHHHHH
Confidence 01111235788888777 8755443332 3567899987443 8999999999999887665
No 313
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=98.10 E-value=4.7e-05 Score=82.15 Aligned_cols=211 Identities=10% Similarity=-0.014 Sum_probs=134.0
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
.|.++..++..+|... +.+|.++++.+|+++|+++|++. ++-+++.+.++.++|.+-|++++.+ ++++
T Consensus 125 ~y~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~i~~~----~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~l 197 (369)
T 3cq5_A 125 SYSMHPILAKGTHTEF---IAVSRGADFRIDMDVALEEIRAK----QPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIV 197 (369)
T ss_dssp SCTHHHHHHHHTTCEE---EEEECCTTSSCCHHHHHHHHHHH----CCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEE
T ss_pred ChHHHHHHHHHcCCEE---EEecCCcCCCCCHHHHHHHhhcc----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEE
Confidence 4667888999999876 89999988899999999999862 1235545778899999999888765 6889
Q ss_pred eecccccccc--ce------------eeeecCCCccc-ccccccc-----c----cCCcccCCCCcccHHHHHHHHHHcc
Q psy13453 95 KVGGVLRRVY--SS------------CLVPRGQKSLR-TTVLFHF-----L----FQHWQIPLGRRFRALKLWMTLRSYG 150 (764)
Q Consensus 95 HVDa~l~~~y--~s------------~ll~rd~~~l~-~~~s~~~-----d----~~d~tle~SRr~~ALklWatL~~lG 150 (764)
++|....... .+ +++..-.+.+- ..+...+ + +....... ....+..+++...+-
T Consensus 198 i~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~--~~~~~~~~a~~~~l~ 275 (369)
T 3cq5_A 198 IVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPY--HLSALSQAAAIVALR 275 (369)
T ss_dssp EEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHHTTSCTT--CSCHHHHHHHHHHHH
T ss_pred EEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHHHHHHcCCCC--CCCHHHHHHHHHHhc
Confidence 9999642110 01 11111111110 0000000 0 00000001 244555555554442
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcE
Q psy13453 151 -LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVI 229 (764)
Q Consensus 151 -~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~ 229 (764)
.+.+.++.++..+.++++.+.+++ .++++. ++..+.+.|++. . + ..++.++|.+.|..
T Consensus 276 ~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~-~~~~~~~~~~~~-~--------------~----~~~l~~~l~~~gi~ 334 (369)
T 3cq5_A 276 HSADTLGTVEKLSVERVRVAARLEE-LGYAVV-PSESNFVFFGDF-S--------------D----QHAAWQAFLDRGVL 334 (369)
T ss_dssp THHHHHTHHHHHHHHHHHHHHHHHH-HTCEEE-CCSSSEEEEECC-S--------------S----HHHHHHHHHHTTEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHh-CCCEEC-CCCCeEEEEECC-C--------------C----HHHHHHHHHHCCEE
Confidence 345677888888999999999988 488876 556666777542 0 1 14677888888864
Q ss_pred EEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 230 YIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 230 ~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
+... ....++|+++. ++++++.+++.|+++.
T Consensus 335 v~~~---~~~~~iRis~~----~~~~i~~~~~~l~~~~ 365 (369)
T 3cq5_A 335 IRDV---GIAGHLRTTIG----VPEENDAFLDAAAEII 365 (369)
T ss_dssp CBCC---SCTTEEEEECC----CHHHHHHHHHHHHHHH
T ss_pred EEEC---CCCCeEEEEeC----CHHHHHHHHHHHHHHH
Confidence 4322 23468999876 6899999999988764
No 314
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=98.09 E-value=2.4e-05 Score=86.72 Aligned_cols=149 Identities=13% Similarity=0.013 Sum_probs=104.9
Q ss_pred ccccCCchHHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCc
Q psy13453 552 FSWLSSPACTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNK 631 (764)
Q Consensus 552 ~~~~~sp~~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~ 631 (764)
..|.......++-+.+.+|+.+.-+.+-. .+.-..++|.||++|...++.+..+. .+
T Consensus 66 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~-----~~~i~i~~t~G~~~al~~~~~~l~~~-----------------~~- 122 (405)
T 3k7y_A 66 KPYLLGNGTEDFSTLTQNLIFGNNSKYIE-----DKKICTIQCIGGTGAIFVLLEFLKML-----------------NV- 122 (405)
T ss_dssp CCCCTTSSCHHHHHHHHHHHHCSSCTTTT-----TTCEEEEEEEHHHHHHHHHHHHHHTT-----------------TC-
T ss_pred CCCCCCCCcHHHHHHHHHHHcCCCCcccc-----ccceEEEEcCchHHHHHHHHHHHHhc-----------------CC-
Confidence 34555556677777788887544333211 01113689999999887766543211 02
Q ss_pred eEEEecCCcchhHHHHHHhCCCceEEEec-CC-CCcccHHHHHHHHHHhhhcCCCceEEEEee-ccCCcccc---ccHHH
Q psy13453 632 LVAYTSDQSNSSVEKSAIIGDVPVRQLRS-DD-NGVLRGDALLTAVKEDLAKGLIPCCLIATL-GTTGTCAF---DNLEE 705 (764)
Q Consensus 632 ~vi~~S~~aH~Sv~kAa~~lGl~v~~Vp~-d~-~g~md~~~Le~~I~~~~~~G~~p~~Vvata-GTT~~Gai---Dpl~e 705 (764)
-.|++.+=+......+++..|.+++.+|+ ++ ++.+|+++|++++++.. .+-+|+.+. .++.||.+ +.+++
T Consensus 123 d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~----~~~~i~l~~~~~NPTG~~~s~~~~~~ 198 (405)
T 3k7y_A 123 ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIP----NGSSVILQISCYNPCSVNIEEKYFDE 198 (405)
T ss_dssp CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSC----SSCEEEECCSSCTTTCCCCCHHHHHH
T ss_pred CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCC----CCeEEEEeCCCCCCCCCCCCHHHHHH
Confidence 24677777777888888999999999998 43 58999999999997531 123555555 47999988 56777
Q ss_pred HHHHHHhcCCEEEEeccccccc
Q psy13453 706 LGPICQEYNIWLHVDAAYAGSA 727 (764)
Q Consensus 706 Ia~i~~~~glwLHVDaA~Gg~~ 727 (764)
|+++|++|++|+.+|-+|....
T Consensus 199 l~~~~~~~~~~vi~De~Y~~l~ 220 (405)
T 3k7y_A 199 IIEIVLHKKHVIIFDIAYQGFG 220 (405)
T ss_dssp HHHHHHHHCCEEEEEESCTTTS
T ss_pred HHHHHHHCCeEEEEecCccccc
Confidence 8899999999999999998754
No 315
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=98.09 E-value=1.7e-05 Score=86.00 Aligned_cols=221 Identities=11% Similarity=0.056 Sum_probs=132.8
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC--CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCccccccc---Cchhhhc----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD--SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQ---SLNAPVS---- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~--~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iD---pi~~ia~---- 90 (764)
.|.++.++++.+|... +.||+++ ++.+|+++|+++|++. +-+++-+.++.++|.+= +++++++
T Consensus 120 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~d~~~l~~~l~~~-----~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~ 191 (389)
T 1gd9_A 120 AFVSYAPAVILAGGKP---VEVPTYEEDEFRLNVDELKKYVTDK-----TRALIINSPCNPTGAVLTKKDLEEIADFVVE 191 (389)
T ss_dssp CCTTHHHHHHHHTCEE---EEEECCGGGTTCCCHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHCCCEE---EEeccCCccCCCCCHHHHHHhcCcC-----ceEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence 5778899999999876 9999985 5789999999999642 22444567888999884 4666664
Q ss_pred -CCCceeccccccc-c--------ce--------eeeecCCCccc-cccccccccC---------CcccCCCCcccHHHH
Q psy13453 91 -NGPLKVGGVLRRV-Y--------SS--------CLVPRGQKSLR-TTVLFHFLFQ---------HWQIPLGRRFRALKL 142 (764)
Q Consensus 91 -~~wlHVDa~l~~~-y--------~s--------~ll~rd~~~l~-~~~s~~~d~~---------d~tle~SRr~~ALkl 142 (764)
++++++|...... + .. +++..-.+.+- ..+...+-+. ......+-....+..
T Consensus 192 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 271 (389)
T 1gd9_A 192 HDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVKFQMYNATCPVTFIQ 271 (389)
T ss_dssp TTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHTTTTCSCCHHHH
T ss_pred cCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECHHHHHHHHHHHhhhccCCCHHHH
Confidence 8899999854211 0 00 11111111110 0000000000 000000112233333
Q ss_pred HHHHHHc--cHH--HHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCcee-EEEEeeccccccccccccCccCCccHHHH
Q psy13453 143 WMTLRSY--GLK--GLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGL-VCFRLKVRFWDKLDNLFGTISFGDNDLNK 217 (764)
Q Consensus 143 WatL~~l--G~e--Gy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~i-V~Fry~P~~~~~~~~~~~~~~~~~d~~n~ 217 (764)
+++...+ +.+ .+.++.++..+.++++.+.|++. +++++. |+-+. +.+++.+. +.+ ..
T Consensus 272 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~~~--------------~~~--~~ 333 (389)
T 1gd9_A 272 YAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM-GLPTVK-PKGAFYIFPRIRDT--------------GLT--SK 333 (389)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCCC-CCBTTEECCBCGGG--------------TCC--HH
T ss_pred HHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc-CCeecC-CCeeeEEEEeccCC--------------CCC--HH
Confidence 3333333 455 78888889999999999999987 787654 44443 33333210 111 24
Q ss_pred HHHHHHH-hcCcEEEEecee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 218 AVYDRII-ARKVIYIVKGSF--QDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 218 ~L~~~L~-~~G~~~vs~t~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
++.++|. +.|..+...... .+..++|+++.+ ++++++.+++.|+++.++
T Consensus 334 ~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~---~~~~i~~~l~~l~~~~~~ 385 (389)
T 1gd9_A 334 KFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT---AYEKLEEAMDRMERVLKE 385 (389)
T ss_dssp HHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS---CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHHh
Confidence 6788887 788765544322 235689999774 789999999999887654
No 316
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=98.08 E-value=9.5e-06 Score=88.29 Aligned_cols=221 Identities=14% Similarity=0.053 Sum_probs=130.1
Q ss_pred HHHHhhcCCCCCCeEEecCC-CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceecc
Q psy13453 25 FKATHSLSGTPDQVRLSGLP-DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGG 98 (764)
Q Consensus 25 ~KAa~~LGl~~~~v~~Vpvd-~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa 98 (764)
.+++...|... ..+.++++ +++.+|+++|+++|++. ++-+++.+.+. .|.+.|++++.+ ++++++|+
T Consensus 126 ~~~~~~~g~~~-~~~~~~~~~~~~~~d~~~l~~~l~~~----~~~~v~~~~p~--~~~~~~l~~i~~l~~~~~~~li~De 198 (407)
T 2dkj_A 126 GSRVNFSGKLY-KVVSYGVRPDTELIDLEEVRRLALEH----RPKVIVAGASA--YPRFWDFKAFREIADEVGAYLVVDM 198 (407)
T ss_dssp TCTTSHHHHHS-EEEEECCCTTTSSCCHHHHHHHHHHH----CCSEEEECCSS--CCSCCCHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHhcCceE-EEEecCCCcccCccCHHHHHHHHhhc----CCeEEEEeccc--cCCCCCHHHHHHHHHHcCCEEEEEc
Confidence 35556666544 11334445 37899999999999853 12244333343 357888888876 89999999
Q ss_pred cccc--c----------cceeeeecCCCcccc---cccc-c-cc-------cCCcccCCCCcccHH-HHHHHHHHccHHH
Q psy13453 99 VLRR--V----------YSSCLVPRGQKSLRT---TVLF-H-FL-------FQHWQIPLGRRFRAL-KLWMTLRSYGLKG 153 (764)
Q Consensus 99 ~l~~--~----------y~s~ll~rd~~~l~~---~~s~-~-~d-------~~d~tle~SRr~~AL-klWatL~~lG~eG 153 (764)
+... . ...+++..-.+.+.+ .+-. . .+ .......++-....+ .+.+++..+..++
T Consensus 199 a~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~ 278 (407)
T 2dkj_A 199 AHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPE 278 (407)
T ss_dssp TTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHH
T ss_pred cccccccccCccCCccccccEEEEeccccCCCCCceEEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhh
Confidence 6321 0 001111111111110 0000 0 00 000111112111122 4566677665678
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEeCC-CCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEE
Q psy13453 154 LQAYLRKHISLAKKFADLVEQDDRFELVCP-PSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIV 232 (764)
Q Consensus 154 y~~~i~~~i~lA~~l~~~I~~~p~~ell~~-P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs 232 (764)
+.++.++..++++++.+.|++. +++++.+ ...+.++|++... +.+ ..++.+.|.+.|.....
T Consensus 279 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~--------------~~~--~~~~~~~l~~~gi~v~~ 341 (407)
T 2dkj_A 279 FKEYSRLVVENAKRLAEELARR-GYRIVTGGTDNHLFLVDLRPK--------------GLT--GKEAEERLDAVGITVNK 341 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGG--------------TCC--HHHHHHHHHHTTEECEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CceeecCCCCceEEEEECccc--------------CCC--HHHHHHHHHHcCceecC
Confidence 9999999999999999999998 8998864 4566777766311 011 24677888888875543
Q ss_pred ece------eCCeeEEEEeccCC---CCCHHHHHHHHHHHHHHHHH
Q psy13453 233 KGS------FQDRLFMRFAICSS---QTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 233 ~t~------l~g~~~LRi~v~np---~Tt~e~i~~~l~~l~~~~~~ 269 (764)
... .....++|+++..+ .+++++++.+++.|+++.++
T Consensus 342 ~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 342 NAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp CCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred CcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 321 11245799987543 47899999999999888654
No 317
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.08 E-value=2e-05 Score=86.99 Aligned_cols=232 Identities=14% Similarity=0.098 Sum_probs=137.4
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhC--C-CCcEE-EEeeCCcccccccCc---hhhhc--
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKS--F-LCPMC-SGYCGRTLHQDIQSL---NAPVS-- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~--G-~~p~~-VatAGTT~~G~iDpi---~~ia~-- 90 (764)
.+.++.+++..+|... +.||+++++ +|+++|+++|++..++ | ++-++ +-+.+..++|.+=|. +++++
T Consensus 142 ~y~~~~~~~~~~g~~~---~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~ 217 (425)
T 1vp4_A 142 AYLGAINAFRQYLANF---VVVPLEDDG-MDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIA 217 (425)
T ss_dssp CCHHHHHHHHTTTCEE---EEEEEETTE-ECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCEE---EEeccCCCC-CCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHH
Confidence 4568889999988866 889998765 9999999999873221 1 12243 456788899998654 44443
Q ss_pred ---CCCceeccccccc-c-----ce----------eeeecCCCccccccccccccCCc---------ccCCCCcccHHHH
Q psy13453 91 ---NGPLKVGGVLRRV-Y-----SS----------CLVPRGQKSLRTTVLFHFLFQHW---------QIPLGRRFRALKL 142 (764)
Q Consensus 91 ---~~wlHVDa~l~~~-y-----~s----------~ll~rd~~~l~~~~s~~~d~~d~---------tle~SRr~~ALkl 142 (764)
++++++|.+.... | .+ +++..-.+.+-.-+...+-+... ....+-....+..
T Consensus 218 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 297 (425)
T 1vp4_A 218 EKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVAGSKEFIRKIVQAKQSADLCSPAITH 297 (425)
T ss_dssp HHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGGGCEEEEECCHHHHHHHHHHHHHHHSSCCHHHH
T ss_pred HHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccccccceEEEeeCHHHHHHHHHHhhhhcCCCCHHHH
Confidence 8899999964221 1 00 11111111111000000000000 0000112244555
Q ss_pred HHHHHHcc----HHHHHHHHHHHHHHHHHHHHHHhcC-C---CeEEeCCCCceeEEEEeeccccccccccccCccCCccH
Q psy13453 143 WMTLRSYG----LKGLQAYLRKHISLAKKFADLVEQD-D---RFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDND 214 (764)
Q Consensus 143 WatL~~lG----~eGy~~~i~~~i~lA~~l~~~I~~~-p---~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~ 214 (764)
+++...+. .+.+.++.++..+.++++.+.|++. | +++++.+.....+.+++. .+. +.
T Consensus 298 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~-~~~------------~~-- 362 (425)
T 1vp4_A 298 RLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLP-EGF------------DT-- 362 (425)
T ss_dssp HHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECC-TTC------------CT--
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcC-CCC------------CH--
Confidence 55555542 3445666666778889999999874 5 688765444445666653 110 11
Q ss_pred HHHHHHHHHHhcCcEEEEecee----CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHccC
Q psy13453 215 LNKAVYDRIIARKVIYIVKGSF----QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLRGK 274 (764)
Q Consensus 215 ~n~~L~~~L~~~G~~~vs~t~l----~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~~~ 274 (764)
.++.++|.++|..+...... .+..++|+++..+ ++++++.+++.|+++.+++.++.
T Consensus 363 --~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~--~~e~i~~~l~~l~~~l~~~~~~~ 422 (425)
T 1vp4_A 363 --WEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLP--PDEKIVEGIKRLREVVLEYGKEK 422 (425)
T ss_dssp --TTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSS--CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCCC--CHHHHHHHHHHHHHHHHHHHhhc
Confidence 24677777788765544333 2357899998764 89999999999999887776543
No 318
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=98.08 E-value=1.3e-05 Score=86.78 Aligned_cols=219 Identities=11% Similarity=0.046 Sum_probs=132.1
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCC-CcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDS-EWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~-~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
.|.++.++++..|+.. +.||++++ +.+|+++|+++|++. +-+++. +.++|.+.|++++++ +++
T Consensus 88 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~d~~~l~~~l~~~-----~~~v~~---~~~~G~~~~~~~i~~l~~~~~~~ 156 (393)
T 1mdo_A 88 TWVSTLNMIVLLGANP---VMVDVDRDTLMVTPEHIEAAITPQ-----TKAIIP---VHYAGAPADLDAIYALGERYGIP 156 (393)
T ss_dssp SCHHHHHHHHHTTCEE---EEECBCTTTCCBCHHHHHHHCCTT-----EEEECC---BCGGGCCCCHHHHHHHHHHHTCC
T ss_pred ccHhHHHHHHHCCCEE---EEEeccCCcCCCCHHHHHHhcCCC-----ceEEEE---eCCCCCcCCHHHHHHHHHHcCCe
Confidence 5788899999999876 99999864 789999999999742 112322 237899999999876 899
Q ss_pred ceeccccccc--c-----c--------------------eeeeecCCCccccccccccccC-------------CcccC-
Q psy13453 94 LKVGGVLRRV--Y-----S--------------------SCLVPRGQKSLRTTVLFHFLFQ-------------HWQIP- 132 (764)
Q Consensus 94 lHVDa~l~~~--y-----~--------------------s~ll~rd~~~l~~~~s~~~d~~-------------d~tle- 132 (764)
+++|++.... + + ++++.++++.... +......+ .+..+
T Consensus 157 li~D~a~~~g~~~~~~~~~~~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (393)
T 1mdo_A 157 VIEDAAHATGTSYKGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADK-LRSLKFHGLGVDAWDRQSGGRAPQAEV 235 (393)
T ss_dssp BCEECTTCTTCEETTEETTSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHH-HHHHTBTTEECC-----------CCEE
T ss_pred EEEECccccCCeECCeecCCCCeEEEeCCCCCccccccceEEEeCCHHHHHH-HHHHHhcCCcccchhhhcccccccccc
Confidence 9999964210 1 1 1222211110000 00000000 01111
Q ss_pred ---CC-CcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC------CceeEEEEeecccccccc
Q psy13453 133 ---LG-RRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP------SMGLVCFRLKVRFWDKLD 202 (764)
Q Consensus 133 ---~S-Rr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P------~l~iV~Fry~P~~~~~~~ 202 (764)
|. -+...+...+.+. ..+++++.+++..++++++.+.|++.+ +++...| ...+++|++.++..
T Consensus 236 ~~~g~~~~~~~~~~a~~~~--~l~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~---- 308 (393)
T 1mdo_A 236 LAPGYKYNLPDLNAAIALA--QLQKLDALNARRAAIAAQYHQAMADLP-FQPLSLPSWEHIHAWHLFIIRVDEARC---- 308 (393)
T ss_dssp SSCCCBCCCCHHHHHHHHH--HHHTHHHHHHHHHHHHHHHHHHHHTSS-CEECCCCSSCEECCCSCEEEECCHHHH----
T ss_pred cccCccCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCCCceeEEEEEEeccccc----
Confidence 11 1234444333333 345688889999999999999999987 8887544 22356776531000
Q ss_pred ccccCccCCccHHHHHHHHHHHhcCcEEEEec-e---------------eC-----CeeEEEEeccCCCCCHHHHHHHHH
Q psy13453 203 NLFGTISFGDNDLNKAVYDRIIARKVIYIVKG-S---------------FQ-----DRLFMRFAICSSQTEESDVQLGWN 261 (764)
Q Consensus 203 ~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t-~---------------l~-----g~~~LRi~v~np~Tt~e~i~~~l~ 261 (764)
+.+ ..++.++|.+.|....... . +. +...+|++ ..+.+++++++.+++
T Consensus 309 --------~~~--~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~-~~~~~t~~~i~~~~~ 377 (393)
T 1mdo_A 309 --------GIT--RDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLP-LFPDMTESDFDRVIT 377 (393)
T ss_dssp --------SSC--HHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEEC-CCTTCCHHHHHHHHH
T ss_pred --------ccC--HHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEec-CCCCCCHHHHHHHHH
Confidence 011 2468888888887432211 0 00 12379996 566778999999999
Q ss_pred HHHHHHH
Q psy13453 262 EIRTATE 268 (764)
Q Consensus 262 ~l~~~~~ 268 (764)
.|+++.+
T Consensus 378 ~l~~~~~ 384 (393)
T 1mdo_A 378 ALHQIAG 384 (393)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9988753
No 319
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.06 E-value=7e-06 Score=90.12 Aligned_cols=221 Identities=8% Similarity=-0.067 Sum_probs=136.8
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC--CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc---cCchhhhc----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD--SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI---QSLNAPVS---- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~--~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i---Dpi~~ia~---- 90 (764)
.|.++.+++...|... +.||+++ ++.+ +++|+++|++. +-+++-+.++.++|.+ ++++++++
T Consensus 135 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~-~~~l~~~l~~~-----~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~ 205 (409)
T 2gb3_A 135 FYANYNAFAKIAGVKL---IPVTRRMEEGFAI-PQNLESFINER-----TKGIVLSNPCNPTGVVYGKDEMRYLVEIAER 205 (409)
T ss_dssp CCTHHHHHHHHHTCEE---EEEECCGGGTSCC-CTTGGGGCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHcCCEE---EEeccCCCCCCcc-HHHHHHhhCcC-----CeEEEECCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 5678889999999876 8999985 4566 89999888642 2244556788899987 45677665
Q ss_pred -CCCceeccccccc-c----cee---------eeecCCCccc-cccccccccCCc----------ccCCCCcccHHHHHH
Q psy13453 91 -NGPLKVGGVLRRV-Y----SSC---------LVPRGQKSLR-TTVLFHFLFQHW----------QIPLGRRFRALKLWM 144 (764)
Q Consensus 91 -~~wlHVDa~l~~~-y----~s~---------ll~rd~~~l~-~~~s~~~d~~d~----------tle~SRr~~ALklWa 144 (764)
++++++|.+.... + .+. ++..-.+.+- ..+...+-+... .-..+ ....+..++
T Consensus 206 ~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~a 284 (409)
T 2gb3_A 206 HGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQGRL-APPLLEQIG 284 (409)
T ss_dssp TTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHHHHHSC-CCCHHHHHH
T ss_pred cCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCccceEEEEEECcHHHHHHHHHHHhccC-CCCHHHHHH
Confidence 8999999964221 1 011 0100011110 000000000000 00011 233444444
Q ss_pred HHHHc--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEE-EeeccccccccccccCccCCccHHHHHHHH
Q psy13453 145 TLRSY--GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCF-RLKVRFWDKLDNLFGTISFGDNDLNKAVYD 221 (764)
Q Consensus 145 tL~~l--G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~F-ry~P~~~~~~~~~~~~~~~~~d~~n~~L~~ 221 (764)
+...+ |.+++.++.++..+.++++.+.|++. +++++..|+-+.++| ++. + .+ ..++.+
T Consensus 285 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~--~--------------~~--~~~l~~ 345 (409)
T 2gb3_A 285 SVGLLNLDDSFFDFVRETYRERVETVLKKLEEH-GLKRFTKPSGAFYITAELP--V--------------ED--AEEFAR 345 (409)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCCCSBSSEEEEECS--S--------------SC--HHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHc-CceeeeCCCeeEEEEEEeC--C--------------CC--HHHHHH
Confidence 44444 78888999999999999999999987 887734455555554 331 0 11 246778
Q ss_pred HHHhc------CcEEEEecee-----CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 222 RIIAR------KVIYIVKGSF-----QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 222 ~L~~~------G~~~vs~t~l-----~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
+|.++ |..+...... .+..++|+++. +++++++.+++.|+++.+++.+
T Consensus 346 ~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~---~~~e~i~~~~~~l~~~l~~~~~ 404 (409)
T 2gb3_A 346 WMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV---LEKDLLSRAIDVLMEGLKMFCS 404 (409)
T ss_dssp HHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC---SCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC---CCHHHHHHHHHHHHHHHHHhhh
Confidence 88876 7655443322 23578999876 7899999999999998877643
No 320
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=98.05 E-value=5.9e-05 Score=83.01 Aligned_cols=221 Identities=8% Similarity=-0.092 Sum_probs=135.2
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC-CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc-----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP-DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS----- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd-~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~----- 90 (764)
.|.++..++..+|... +.||++ +.+.+|+++|+++|++. ++-+++-+.++.++|.+=| +.++++
T Consensus 142 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~d~~~l~~~l~~~----~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~ 214 (437)
T 3g0t_A 142 GFNLNKLQCRILGQKF---ESFDLFEYRGEKLREKLESYLQTG----QFCSIIYSNPNNPTWQCMTDEELRIIGELATKH 214 (437)
T ss_dssp CCHHHHHHHHHHTCCC---EEEEGGGGCTTHHHHHHHHHHTTT----CCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHT
T ss_pred CcHhHHHHHHHcCCEE---EEEeecCCCCccCHHHHHHHHhcC----CceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHC
Confidence 5678899999999988 999996 45689999999999421 2334545677999999876 444443
Q ss_pred CCCceeccccccc-cc---ee------------------eeecCCCccc-ccccccc-----ccCC-c------c-----
Q psy13453 91 NGPLKVGGVLRRV-YS---SC------------------LVPRGQKSLR-TTVLFHF-----LFQH-W------Q----- 130 (764)
Q Consensus 91 ~~wlHVDa~l~~~-y~---s~------------------ll~rd~~~l~-~~~s~~~-----d~~d-~------t----- 130 (764)
++++++|.+.... +. ++ ++..-.+.+. ..+...+ +..+ . .
T Consensus 215 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~ 294 (437)
T 3g0t_A 215 DVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLYEREYPDLEESFGRLR 294 (437)
T ss_dssp TCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHHHHHCBCGGGHHHHSCSB
T ss_pred CcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECHHHhhhhhhcccccccccc
Confidence 8999999965211 10 00 0111111110 0000000 0001 0 0
Q ss_pred -----cCCC-----CcccHHHHHHHHHHccHHH-----HHHHHHHHHHHHHHHHHHHhcCCCeEEe------CC-CCcee
Q psy13453 131 -----IPLG-----RRFRALKLWMTLRSYGLKG-----LQAYLRKHISLAKKFADLVEQDDRFELV------CP-PSMGL 188 (764)
Q Consensus 131 -----le~S-----Rr~~ALklWatL~~lG~eG-----y~~~i~~~i~lA~~l~~~I~~~p~~ell------~~-P~l~i 188 (764)
+.-. -....+..+++...+.... +.++.++..+..+++.+.|++. +++++ .+ .....
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~ 373 (437)
T 3g0t_A 295 FGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN-GFNIVYDKDGNEPLADGFY 373 (437)
T ss_dssp HHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT-TEEESSCEETTEECCSSSE
T ss_pred hhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCEEeccccCCCCCceeEE
Confidence 1110 1233455556555554433 7888899999999999999998 89887 34 33344
Q ss_pred EEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCC--eeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 189 VCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQD--RLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 189 V~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g--~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
+.+++. + .+ ..++.++|.++|..+........ ..++|+++.. .++++++.+++.|+++
T Consensus 374 ~~~~~~--~--------------~~--~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~--~~~e~i~~~~~~l~~~ 433 (437)
T 3g0t_A 374 FTVGYK--G--------------MD--SSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSL--LPESQFPDLEKRLQML 433 (437)
T ss_dssp EEEEET--T--------------CC--HHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSS--SCGGGHHHHHHHHHHH
T ss_pred EEEecC--C--------------CC--HHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEec--CCHHHHHHHHHHHHHH
Confidence 445442 1 11 24688888888876554332211 2579998873 3789999999999887
Q ss_pred HH
Q psy13453 267 TE 268 (764)
Q Consensus 267 ~~ 268 (764)
.+
T Consensus 434 ~~ 435 (437)
T 3g0t_A 434 NA 435 (437)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 321
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=98.03 E-value=5.6e-05 Score=82.21 Aligned_cols=221 Identities=6% Similarity=-0.033 Sum_probs=133.5
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCc-EEEEeeCCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCP-MCSGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p-~~VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
.|.++.++++..|... +.+| .+|+++|+++|++....|..+ +++-+.++.++|.+.|++++.+ +++
T Consensus 138 ~~~~~~~~~~~~g~~~---~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~ 209 (401)
T 1fc4_A 138 NHASIIDGVRLCKAKR---YRYA-----NNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDAL 209 (401)
T ss_dssp CCHHHHHHHHTSCSEE---EEEC-----TTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEE
T ss_pred hHHHHHHHHHHcCCce---EEEC-----CCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCE
Confidence 5668889999988766 6666 358999999998754433234 4456778899999999999876 889
Q ss_pred ceeccccc-cc-c-ce--------------eeeecCCCccccc---cc-cccc----c---C-CcccCCCCcccHHHHHH
Q psy13453 94 LKVGGVLR-RV-Y-SS--------------CLVPRGQKSLRTT---VL-FHFL----F---Q-HWQIPLGRRFRALKLWM 144 (764)
Q Consensus 94 lHVDa~l~-~~-y-~s--------------~ll~rd~~~l~~~---~s-~~~d----~---~-d~tle~SRr~~ALklWa 144 (764)
+++|.+.. .. + .+ +++..-.+.+... +- ...+ + . .+...+ ....+..++
T Consensus 210 li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~gG~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~a 287 (401)
T 1fc4_A 210 VMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSN--SLAPAIVAA 287 (401)
T ss_dssp EEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSCEEEEECHHHHHHHHHHCHHHHHSC--CCCHHHHHH
T ss_pred EEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCCEEEEcCHHHHHHHHHhCcCceeCC--CCCHHHHHH
Confidence 99999752 11 1 00 0100111111000 00 0000 0 0 011111 222333333
Q ss_pred HHHHccH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHH
Q psy13453 145 TLRSYGL-KGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRI 223 (764)
Q Consensus 145 tL~~lG~-eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L 223 (764)
.+..+.. +...++.++..++++++.+.|++. +++++ ++..+++.|++.. ..-..++.++|
T Consensus 288 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~-----------------~~~~~~l~~~l 348 (401)
T 1fc4_A 288 SIKVLEMVEAGSELRDRLWANARQFREQMSAA-GFTLA-GADHAIIPVMLGD-----------------AVVAQKFAREL 348 (401)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-TCCBC-CSSSSEEEEEEEC-----------------HHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCCCEEEEEcCC-----------------hHHHHHHHHHH
Confidence 3322211 114677888889999999999987 77766 5566777776531 01235788888
Q ss_pred HhcCcEEEEecee---CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 224 IARKVIYIVKGSF---QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 224 ~~~G~~~vs~t~l---~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
.++|......... .+..++|+++. ..+++++++.+++.|+++.+++
T Consensus 349 ~~~gi~v~~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~ 397 (401)
T 1fc4_A 349 QKEGIYVTGFFYPVVPKGQARIRTQMS-AAHTPEQITRAVEAFTRIGKQL 397 (401)
T ss_dssp HHTTEECCEECTTSSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHCCcEEeeecCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 8888754333211 13468999754 4457999999999999887654
No 322
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=98.03 E-value=5.6e-05 Score=81.27 Aligned_cols=218 Identities=9% Similarity=-0.006 Sum_probs=130.9
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc-----C
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS-----N 91 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~-----~ 91 (764)
.|.++..++...|... +.+|++++ +|+++|+++|++. +.+++-+.++.++|.+=| +.++++ +
T Consensus 114 ~~~~~~~~~~~~g~~~---~~~~~~~~--~d~~~l~~~l~~~-----~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~ 183 (377)
T 3fdb_A 114 AYPPFFHLLSATQREG---IFIDATGG--INLHDVEKGFQAG-----ARSILLCNPYNPLGMVFAPEWLNELCDLAHRYD 183 (377)
T ss_dssp CCTHHHHHHHHHTCCE---EEEECTTS--CCHHHHHHHHHTT-----CCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTT
T ss_pred CcHhHHHHHHHcCCEE---EEccCCCC--CCHHHHHHHhccC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcC
Confidence 4677889999999877 99999976 9999999999863 235556667889999854 444533 8
Q ss_pred CCceecccccc-------c---cce-------eeeecCCCccc-ccccccccc-CCc-------ccC--CCCcccHHHHH
Q psy13453 92 GPLKVGGVLRR-------V---YSS-------CLVPRGQKSLR-TTVLFHFLF-QHW-------QIP--LGRRFRALKLW 143 (764)
Q Consensus 92 ~wlHVDa~l~~-------~---y~s-------~ll~rd~~~l~-~~~s~~~d~-~d~-------tle--~SRr~~ALklW 143 (764)
+++++|.+... . +.+ +++..-.+.+- ..+...+-. .+. ... .+-....+..+
T Consensus 184 ~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (377)
T 3fdb_A 184 ARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLI 263 (377)
T ss_dssp CEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHH
T ss_pred CEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHH
Confidence 99999986421 1 100 11111111110 000000000 000 000 00122334444
Q ss_pred HHHHH--ccHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEeCCCCceeEE-EEeeccccccccccccCccCCccHHHHHH
Q psy13453 144 MTLRS--YGLKGLQAYLRKHISLAKKFADLVEQ-DDRFELVCPPSMGLVC-FRLKVRFWDKLDNLFGTISFGDNDLNKAV 219 (764)
Q Consensus 144 atL~~--lG~eGy~~~i~~~i~lA~~l~~~I~~-~p~~ell~~P~l~iV~-Fry~P~~~~~~~~~~~~~~~~~d~~n~~L 219 (764)
++... .+.+.+.++.++..+..+++.+.+++ .|++++.. |+-+.+. +++... ..+ .++
T Consensus 264 a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~--------------~~~---~~~ 325 (377)
T 3fdb_A 264 AAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITP-MQATYLMWIDFRDT--------------TIE---GSP 325 (377)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECC-CSBCSEEEEECTTS--------------CCC---SCH
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEec-CCeeEEEEEECccc--------------CCC---HHH
Confidence 43333 34567888899999999999999998 89999864 4444443 443210 011 235
Q ss_pred HHHHHhc-CcEEEEeceeC--CeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 220 YDRIIAR-KVIYIVKGSFQ--DRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 220 ~~~L~~~-G~~~vs~t~l~--g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
.++|.++ |..+....... +..++|+++.. ++++++.+++.|+++.+
T Consensus 326 ~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~---~~e~i~~~l~~l~~~l~ 374 (377)
T 3fdb_A 326 SEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT---SREVLEEAIDRMAKAVS 374 (377)
T ss_dssp HHHHHHHHCEECEEGGGGCGGGTTEEEEECCS---CHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCEEecCChhccCCCCCEEEEEeCC---CHHHHHHHHHHHHHHHh
Confidence 5666655 76554333222 35789998773 78999999999887653
No 323
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=98.02 E-value=0.00014 Score=80.03 Aligned_cols=231 Identities=11% Similarity=0.014 Sum_probs=132.4
Q ss_pred eeeHHHHH-hhcCCCCCCeEEecCC--CCCcccHHHHHHHHHHHhhCCCCcE-EEEeeCCcccccccC---chhhhc---
Q psy13453 21 IYESFKAT-HSLSGTPDQVRLSGLP--DSEWLAYLTLRTIYESFRKSFLCPM-CSGYCGRTLHQDIQS---LNAPVS--- 90 (764)
Q Consensus 21 ~YSv~KAa-~~LGl~~~~v~~Vpvd--~~~rmD~~aLe~~I~~~~~~G~~p~-~VatAGTT~~G~iDp---i~~ia~--- 90 (764)
|.++..++ ...|+.. +.||++ +++.+|+++|+++|++....+..+- ++-+-++.++|.+-| ++++++
T Consensus 142 y~~~~~~~~~~~g~~~---~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~ 218 (428)
T 1iay_A 142 YPAFNRDLRWRTGVQL---IPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTN 218 (428)
T ss_dssp CTTHHHHTTTTTCCEE---EEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CcchHHHHHHhcCCEE---EEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHH
Confidence 33455544 4677765 889987 3568999999999987654443343 345668889999988 666654
Q ss_pred --CCCceecccccc------cccee------------------eeecCCCccc-cccccccccC-Ccc-------cCCCC
Q psy13453 91 --NGPLKVGGVLRR------VYSSC------------------LVPRGQKSLR-TTVLFHFLFQ-HWQ-------IPLGR 135 (764)
Q Consensus 91 --~~wlHVDa~l~~------~y~s~------------------ll~rd~~~l~-~~~s~~~d~~-d~t-------le~SR 135 (764)
++++++|.+... .+.++ ++..-.+.+- ..+...+-+. +.. ....-
T Consensus 219 ~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~~~ 298 (428)
T 1iay_A 219 QHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFG 298 (428)
T ss_dssp TTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHTTS
T ss_pred HCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHHhcc
Confidence 789999996432 11111 1111111110 0000000000 000 00000
Q ss_pred cccHHHHHHHHHHccH-----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccC
Q psy13453 136 RFRALKLWMTLRSYGL-----KGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISF 210 (764)
Q Consensus 136 r~~ALklWatL~~lG~-----eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~ 210 (764)
....+...++...+-. +.+.++.++..+..+++.+.|++. +++++.+..-+.+.+++... .. .
T Consensus 299 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~-~~----------~ 366 (428)
T 1iay_A 299 LVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKCLKNNAGLFCWMDLRPL-LR----------E 366 (428)
T ss_dssp CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCSSSSEEEEECGGG-CS----------S
T ss_pred cCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCeeEEEEEechhh-cC----------C
Confidence 1233444444444432 356677788889999999999987 77754432444555655311 00 0
Q ss_pred CccHHHHHHHHHHHhc-CcEEEEeceeC--CeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 211 GDNDLNKAVYDRIIAR-KVIYIVKGSFQ--DRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 211 ~~d~~n~~L~~~L~~~-G~~~vs~t~l~--g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
.......++.++|.++ |..+....... +..++|+++. .+++++++.+++.|+++.+
T Consensus 367 ~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~--~~~~e~i~~~~~~l~~~l~ 425 (428)
T 1iay_A 367 STFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA--NMDDGTVDIALARIRRFVG 425 (428)
T ss_dssp SSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECS--SSCHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe--cCCHHHHHHHHHHHHHHHh
Confidence 0111235788899876 87655443332 2468999887 3689999999999988753
No 324
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=98.01 E-value=2.6e-05 Score=84.80 Aligned_cols=225 Identities=11% Similarity=0.015 Sum_probs=136.5
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC-CC--CcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc---
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP-DS--EWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS--- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd-~~--~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~--- 90 (764)
.|.++..++..+|... +.+|++ ++ +++|+++|+++|++. ++-+++-+.++.++|.+-| ++++++
T Consensus 122 ~~~~~~~~~~~~g~~~---~~~~~~~~~g~~~~d~~~l~~~l~~~----~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~ 194 (399)
T 1c7n_A 122 VYYPFFMAIKNQERKI---IECELLEKDGYYTIDFQKLEKLSKDK----NNKALLFCSPHNPVGRVWKKDELQKIKDIVL 194 (399)
T ss_dssp CCTHHHHHHHTTTCEE---EECCCEEETTEEECCHHHHHHHHTCT----TEEEEEEESSBTTTTBCCCHHHHHHHHHHHH
T ss_pred CcHhHHHHHHHcCCEE---EecccccCCCCEEEcHHHHHHHhccC----CCcEEEEcCCCCCCCcCcCHHHHHHHHHHHH
Confidence 5677888899888766 888886 43 479999999999731 1224445778999999987 666664
Q ss_pred --CCCceeccccccc-cc-----ee------------eeecCCCccc-cccccccccC-Cc---------ccCCC-Cccc
Q psy13453 91 --NGPLKVGGVLRRV-YS-----SC------------LVPRGQKSLR-TTVLFHFLFQ-HW---------QIPLG-RRFR 138 (764)
Q Consensus 91 --~~wlHVDa~l~~~-y~-----s~------------ll~rd~~~l~-~~~s~~~d~~-d~---------tle~S-Rr~~ 138 (764)
++++++|.+.... +. ++ ++..-.+.+- .-+...+-+. +. ....+ -...
T Consensus 195 ~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~ 274 (399)
T 1c7n_A 195 KSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFT 274 (399)
T ss_dssp HSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCC
T ss_pred HcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHHHHHHHhhcccCCCC
Confidence 8899999864211 10 00 0100011110 0000000000 00 00000 0223
Q ss_pred HHHHHHHHHHc--cHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEeCCCCceeEE-EEeeccccccccccccCccCCccH
Q psy13453 139 ALKLWMTLRSY--GLKGLQAYLRKHISLAKKFADLVEQ-DDRFELVCPPSMGLVC-FRLKVRFWDKLDNLFGTISFGDND 214 (764)
Q Consensus 139 ALklWatL~~l--G~eGy~~~i~~~i~lA~~l~~~I~~-~p~~ell~~P~l~iV~-Fry~P~~~~~~~~~~~~~~~~~d~ 214 (764)
.+..+++...+ +.+.+.++.++..+..+++.+.|++ .|+++++ .|+-+.++ +++... +.+
T Consensus 275 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~--------------~~~- 338 (399)
T 1c7n_A 275 TLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAP-LIEGTYLQWIDFRAL--------------KMD- 338 (399)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCC-CCSBSSEEEEECGGG--------------CCC-
T ss_pred HHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEe-cCCceEEEEEEcccC--------------CCC-
Confidence 44444443333 5677888888899999999999998 8898765 45555554 454210 011
Q ss_pred HHHHHHHHHH-hcCcEEEEeceeC--CeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 215 LNKAVYDRII-ARKVIYIVKGSFQ--DRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 215 ~n~~L~~~L~-~~G~~~vs~t~l~--g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
..++.++|. +.|..+....... +..++|+++..+ +++++++++.+.++.+++.
T Consensus 339 -~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~---~~~l~~~l~~l~~~l~~~~ 394 (399)
T 1c7n_A 339 -HKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAP---SSVIQESLERLNKALKDLK 394 (399)
T ss_dssp -HHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSC---HHHHHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEeccC---HHHHHHHHHHHHHHHHHHH
Confidence 246788887 6787655433322 356899988764 7899999999998887764
No 325
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=98.01 E-value=6.4e-05 Score=80.63 Aligned_cols=212 Identities=7% Similarity=0.024 Sum_probs=132.9
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecC-CCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-------C
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGL-PDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-------N 91 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpv-d~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-------~ 91 (764)
.|.++..++...|... +.||+ ++++ +|+++|+++|+++ +-+++-+.++.++|.+=|++++.+ +
T Consensus 115 ~~~~~~~~~~~~g~~~---~~v~~~~~~~-~d~~~l~~~l~~~-----~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~ 185 (365)
T 3get_A 115 TFAMYEIYAKQCGAKC---YKTQSITHNL-DEFKKLYETHKDE-----IKLIFLCLPNNPLGECLDASEATEFIKGVNED 185 (365)
T ss_dssp CCTHHHHHHHHHTCEE---EECSSSSCCH-HHHHHHHHHTTTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHTSCTT
T ss_pred ChHHHHHHHHHcCCEE---EEEecCCCCC-CCHHHHHHHhCCC-----CCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCC
Confidence 4678888999999877 99998 6788 9999999999742 224445778999999977766443 7
Q ss_pred CCceeccccc------c--ccce-----------eeeecCCCccc-ccccccc-----c----cCCcccCCCCcccHHHH
Q psy13453 92 GPLKVGGVLR------R--VYSS-----------CLVPRGQKSLR-TTVLFHF-----L----FQHWQIPLGRRFRALKL 142 (764)
Q Consensus 92 ~wlHVDa~l~------~--~y~s-----------~ll~rd~~~l~-~~~s~~~-----d----~~d~tle~SRr~~ALkl 142 (764)
+++++|.+.. . ...+ +++..-.+.+- ..+...+ + +....-.. ....+..
T Consensus 186 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~ 263 (365)
T 3get_A 186 CLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISAFYKLRAPF--NVSNLAL 263 (365)
T ss_dssp SEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHHHHHHHSCTT--CSCHHHH
T ss_pred cEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCHHHHHHHHHhcCCC--CcCHHHH
Confidence 8999999642 1 0000 11111111110 0000000 0 00000001 1334444
Q ss_pred HHHHHHc-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHH
Q psy13453 143 WMTLRSY-GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYD 221 (764)
Q Consensus 143 WatL~~l-G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~ 221 (764)
++....+ -.+.+.++.++..+.++++.+.++++ ++++. ++.-+.+.+++.. . + ..++.+
T Consensus 264 ~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~~~~~~~~~~---------------~-~--~~~~~~ 323 (365)
T 3get_A 264 KAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH-NIKII-DSYTNFITYFFDE---------------K-N--STDLSE 323 (365)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEC-CCSSSEEEEECSS---------------S-C--HHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEC-CCCCeEEEEECCC---------------C-C--HHHHHH
Confidence 4443333 23678888889999999999999998 88864 4555556565421 1 1 246788
Q ss_pred HHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 222 RIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 222 ~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
+|.++|..+....... ..++|+++. ++++++.+++.|+++.
T Consensus 324 ~l~~~gi~v~~g~~~~-~~~iRis~~----~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 324 KLLKKGIIIRNLKSYG-LNAIRITIG----TSYENEKFFTEFDKIL 364 (365)
T ss_dssp HHHTTTEECEECGGGT-CSEEEEECC----CHHHHHHHHHHHHHHH
T ss_pred HHHHCCEEEEECccCC-CCEEEEEcC----CHHHHHHHHHHHHHHh
Confidence 8888887654443333 578999876 7899999999998753
No 326
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=98.01 E-value=3.1e-05 Score=83.37 Aligned_cols=219 Identities=10% Similarity=0.023 Sum_probs=130.9
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC---CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc---
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD---SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS--- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~---~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~--- 90 (764)
.|.++..++...|... +.+|++. ++.+|+++|+++|+.. +-+++-+.++.++|.+=| +.++++
T Consensus 115 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~v~i~~p~nptG~~~~~~~l~~l~~~~~ 186 (383)
T 3kax_A 115 IYPPFFEMVTTNNRQL---CVSPLQKQNDTYAIDFEHLEKQFQQG-----VKLMLLCSPHNPIGRVWKKEELTKLGSLCT 186 (383)
T ss_dssp CCHHHHHHHHHTTCEE---EECCCEEETTEEECCHHHHHHHHTTT-----CCEEEEESSBTTTTBCCCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCEE---EeccceecCCcEEEcHHHHHHHhCcC-----CeEEEEeCCCCCCCcCcCHHHHHHHHHHHH
Confidence 5678889999999877 8899863 3569999999999432 234445668999999855 444532
Q ss_pred --CCCceeccccccc-cc-----e------------eeeecCCCccc-cccccccccC-Cc---------ccCCC-Cccc
Q psy13453 91 --NGPLKVGGVLRRV-YS-----S------------CLVPRGQKSLR-TTVLFHFLFQ-HW---------QIPLG-RRFR 138 (764)
Q Consensus 91 --~~wlHVDa~l~~~-y~-----s------------~ll~rd~~~l~-~~~s~~~d~~-d~---------tle~S-Rr~~ 138 (764)
++++++|.+.... +. + +++..-.+.+- ..+...+-.. +. ....+ -...
T Consensus 187 ~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (383)
T 3kax_A 187 KYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQYRQGFHGLN 266 (383)
T ss_dssp HHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCC
T ss_pred HCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHhhcccCCCC
Confidence 8999999864211 10 0 00110011110 0000000000 00 00001 1233
Q ss_pred HHHHHHHHHHc--cHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEeCCCCceeEE-EEeeccccccccccccCccCCccH
Q psy13453 139 ALKLWMTLRSY--GLKGLQAYLRKHISLAKKFADLVEQ-DDRFELVCPPSMGLVC-FRLKVRFWDKLDNLFGTISFGDND 214 (764)
Q Consensus 139 ALklWatL~~l--G~eGy~~~i~~~i~lA~~l~~~I~~-~p~~ell~~P~l~iV~-Fry~P~~~~~~~~~~~~~~~~~d~ 214 (764)
.+..+++...+ +.+.+.++.++..+..+++.+.|++ .|+++++. |+-+.+. +++... +.+
T Consensus 267 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~--------------~~~- 330 (383)
T 3kax_A 267 IFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMK-PEGSFLLWIDCSAL--------------NLS- 330 (383)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECC-CSBSSEEEEECGGG--------------CCC-
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEec-CCceEEEEEEcccc--------------CCC-
Confidence 34444444333 5666888888899999999999998 79998764 4555554 443211 011
Q ss_pred HHHHHHHHHH-hcCcEEEEecee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 215 LNKAVYDRII-ARKVIYIVKGSF--QDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 215 ~n~~L~~~L~-~~G~~~vs~t~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
..++.++|. +.|..+...... .+..++|++++ +++++++++++.|+++
T Consensus 331 -~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~---~~~~~i~~~l~~l~~~ 381 (383)
T 3kax_A 331 -QDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIG---CPRSVLEEILNRLRHT 381 (383)
T ss_dssp -HHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECS---SCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEc---CCHHHHHHHHHHHHHH
Confidence 246788887 578755443322 23578999877 4788999999988765
No 327
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=98.00 E-value=0.00014 Score=81.16 Aligned_cols=230 Identities=12% Similarity=0.061 Sum_probs=130.9
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCc-EE-EEeeCCcccccccCch---hhhc----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCP-MC-SGYCGRTLHQDIQSLN---APVS---- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p-~~-VatAGTT~~G~iDpi~---~ia~---- 90 (764)
.+.+...+++.+|... +.||+++++ +|+++|+++|+.+...+..| ++ +-..+..++|.+=|.+ ++++
T Consensus 173 ~y~~~~~~~~~~g~~~---~~v~~~~~g-~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~ 248 (448)
T 3aow_A 173 TYLAALQAFNFYEPQY---IQIPLDDEG-MKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASE 248 (448)
T ss_dssp CCHHHHHHHHTTCCEE---EEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHcCCEE---EEeccCCCC-CCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHH
Confidence 4567888889888766 889998765 99999999998432222223 33 4566788999885543 4443
Q ss_pred -CCCceeccccccc-cc-----ee----------eeecCCCccccccccccccCCc---------ccCCCCcccHHHHHH
Q psy13453 91 -NGPLKVGGVLRRV-YS-----SC----------LVPRGQKSLRTTVLFHFLFQHW---------QIPLGRRFRALKLWM 144 (764)
Q Consensus 91 -~~wlHVDa~l~~~-y~-----s~----------ll~rd~~~l~~~~s~~~d~~d~---------tle~SRr~~ALklWa 144 (764)
++++++|...... |. ++ .+..-.+.+-.-+...+-.... .-..+-....+..++
T Consensus 249 ~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~~~l~~~l~~~~~~~~~~~~~~~q~a 328 (448)
T 3aow_A 249 YDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVV 328 (448)
T ss_dssp HTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTCGGGCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred cCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhccccccEEEEEeCHHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 8899999864211 10 00 1111111111000000000000 000001123343344
Q ss_pred HHHHc--c--HHHHHHHHHHHHHHHHHHHHHHhc-CC-CeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHH
Q psy13453 145 TLRSY--G--LKGLQAYLRKHISLAKKFADLVEQ-DD-RFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKA 218 (764)
Q Consensus 145 tL~~l--G--~eGy~~~i~~~i~lA~~l~~~I~~-~p-~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~ 218 (764)
+...+ | .+.+.++.++..+..+++.+.|++ .| ++++..+..-..+.+++. . ..+ ..+
T Consensus 329 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~~-~--------------~~~--~~~ 391 (448)
T 3aow_A 329 AWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLP-D--------------GID--SKK 391 (448)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEECS-T--------------TCC--HHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCccEEEEEEcC-C--------------CCC--HHH
Confidence 33333 2 233444455555788899999987 57 688654433344445442 1 111 246
Q ss_pred HHHHHHhcCcEEEEecee----CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 219 VYDRIIARKVIYIVKGSF----QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 219 L~~~L~~~G~~~vs~t~l----~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
+.++|.++|..+...... .+..++|+++..+ ++++++.+++.|.++.++..+
T Consensus 392 l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~~--~~e~i~~~~~~L~~~l~~~~~ 447 (448)
T 3aow_A 392 MLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYV--DEDKIMEGIKRLAETIKEELK 447 (448)
T ss_dssp HHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSSS--CTHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeCCC--CHHHHHHHHHHHHHHHHHHHh
Confidence 888888888766554433 2457899998764 789999999999998776543
No 328
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=98.00 E-value=0.00014 Score=82.20 Aligned_cols=217 Identities=11% Similarity=0.001 Sum_probs=126.2
Q ss_pred HHhhcCCCCCCeEEecC--C-CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceecc
Q psy13453 27 ATHSLSGTPDQVRLSGL--P-DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGG 98 (764)
Q Consensus 27 Aa~~LGl~~~~v~~Vpv--d-~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa 98 (764)
++.+.|... +.||+ + +++++|+++|+++|++. ++-+++. +.+..+.+.|++++++ ++++++|+
T Consensus 158 ~v~~~G~~~---~~v~~~~~~~~~~iD~d~le~~i~~~----~tklIi~--~~sn~~~~~dl~~i~~ia~~~g~~livD~ 228 (483)
T 1rv3_A 158 KISATSIFF---ESMAYKVNPDTGYIDYDRLEENARLF----HPKLIIA--GTSCYSRNLDYGRLRKIADENGAYLMADM 228 (483)
T ss_dssp BCSHHHHHS---EEEEECBCTTTCSBCHHHHHHHHHHH----CCSEEEE--CCSSCCSCCCHHHHHHHHHHTTCEEEEEC
T ss_pred CcccccceE---EEEECccccCCCcCCHHHHHHHHhhc----CCcEEEE--eCCcCCCcCCHHHHHHHHHHcCCEEEEEc
Confidence 344445333 45554 6 67999999999999843 1224444 2233337888988776 89999998
Q ss_pred ccc-----------------------cc-----cceeeeecCCCc-cc---c-----ccccccccC-CcccCCCCccc-H
Q psy13453 99 VLR-----------------------RV-----YSSCLVPRGQKS-LR---T-----TVLFHFLFQ-HWQIPLGRRFR-A 139 (764)
Q Consensus 99 ~l~-----------------------~~-----y~s~ll~rd~~~-l~---~-----~~s~~~d~~-d~tle~SRr~~-A 139 (764)
++. ++ .+++++.++... +. . .+....+.. ....+++-... .
T Consensus 229 ah~~g~~~~~~~~~p~~~~div~~s~~K~l~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~i 308 (483)
T 1rv3_A 229 AHISGLVVAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAI 308 (483)
T ss_dssp TTTHHHHHHTSSCCGGGTCSEEEEESSGGGCCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHH
T ss_pred cchhcccccCCCCCCCCCCcEEEecCcccCCCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHH
Confidence 531 11 113444443210 00 0 000000000 11224443222 3
Q ss_pred HHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC-ceeEEEEeeccccccccccccCccCCccHHHHH
Q psy13453 140 LKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS-MGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKA 218 (764)
Q Consensus 140 LklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~-l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~ 218 (764)
..+.++++.+..+++.++.++..++++++.+.|++. +++++.+.. ...+.+.+.+. +.+ ..+
T Consensus 309 aal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~--------------g~~--~~~ 371 (483)
T 1rv3_A 309 AGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL-GYKIVTGGSDNHLILVDLRSK--------------GTD--GGR 371 (483)
T ss_dssp HHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEEGGGG--------------TCC--HHH
T ss_pred HHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc-CCEeccCCCCCceEEEeccCC--------------CCC--HHH
Confidence 355677888777899999999999999999999997 999886532 22333333221 111 134
Q ss_pred HHHHHHhcCcEEEEe--cee---CCeeEEEEeccCC---CCCHHHHHHHHHHHHHHHHH
Q psy13453 219 VYDRIIARKVIYIVK--GSF---QDRLFMRFAICSS---QTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 219 L~~~L~~~G~~~vs~--t~l---~g~~~LRi~v~np---~Tt~e~i~~~l~~l~~~~~~ 269 (764)
+.+.|.+.|...... ..- -+..++|+++... ..++++++.+++.|+++.+.
T Consensus 372 ~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 372 AEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp HHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 667777778643311 110 1346899987642 33499999999999888654
No 329
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=97.99 E-value=6e-05 Score=81.87 Aligned_cols=207 Identities=13% Similarity=0.029 Sum_probs=124.4
Q ss_pred eEEecCC-CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceeccccccc--------
Q psy13453 38 VRLSGLP-DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGGVLRRV-------- 103 (764)
Q Consensus 38 v~~Vpvd-~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa~l~~~-------- 103 (764)
++.+|++ +++.+|+++|+++|++.. +-+++.+ .+..|...+++++.+ ++++++|++....
T Consensus 138 ~~~~~~~~~~~~~d~~~l~~~i~~~~----~~~v~~~--~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~ 211 (405)
T 2vi8_A 138 FVAYGVDPETHVIDYDDVREKARLHR----PKLIVAA--AAAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHP 211 (405)
T ss_dssp EEEECBCTTTCSBCHHHHHHHHHHHC----CSEEEEC--CSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSC
T ss_pred EEecccccccCCcCHHHHHHHHHhcC----CeEEEEe--CCCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCC
Confidence 4667776 678999999999998631 2233332 244577778888775 8999999964210
Q ss_pred ----cceeeeecCCCccc---ccccc-ccc-------c-CCcccCCCC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHH
Q psy13453 104 ----YSSCLVPRGQKSLR---TTVLF-HFL-------F-QHWQIPLGR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAK 166 (764)
Q Consensus 104 ----y~s~ll~rd~~~l~---~~~s~-~~d-------~-~d~tle~SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~ 166 (764)
...+++..-.+.+. ..+-. ..+ . ..++ .++- ......+.+++..+..+++.++.++..++++
T Consensus 212 ~~~~~~di~~~s~sK~~~g~~gG~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~ 290 (405)
T 2vi8_A 212 NPVPYAHFVTTTTHKTLRGPRGGMILCQEQFAKQIDKAIFPGI-QGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAK 290 (405)
T ss_dssp CSTTTCSEEEEESSSTTCCCSCEEEEECHHHHHHHHHHHTTTT-CSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred CccccCCEEEEeccccCCCCCCeEEEEcHHHHHHHHhhhcccc-cCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 00111111111111 00000 000 0 0111 1221 1222344566666555788999999999999
Q ss_pred HHHHHHhcCCCeEEeCCC-CceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEec------eeCCe
Q psy13453 167 KFADLVEQDDRFELVCPP-SMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKG------SFQDR 239 (764)
Q Consensus 167 ~l~~~I~~~p~~ell~~P-~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t------~l~g~ 239 (764)
++.+.|++. +++++.++ ..+.+.+++.+. +.+ ...+.+.|.+.|....... .....
T Consensus 291 ~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~--------------~~~--~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~ 353 (405)
T 2vi8_A 291 RLASALQNE-GFTLVSGGTDNHLLLVDLRPQ--------------QLT--GKTAEKVLDEVGITVNKNTIPYDPESPFVT 353 (405)
T ss_dssp HHHHHHHHT-TCEEGGGSCSSSEEEEECGGG--------------TCC--HHHHHHHHHHHTEECEEECCTTCSSCTTTC
T ss_pred HHHHHHHhC-CCeEecCCCCceEEEEEccCC--------------CCC--HHHHHHHHHHcCceeccCcCccccCCCCCC
Confidence 999999998 89987653 466677765321 111 2457778888887654322 11123
Q ss_pred eEEEEeccC---CCCCHHHHHHHHHHHHHHHH
Q psy13453 240 LFMRFAICS---SQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 240 ~~LRi~v~n---p~Tt~e~i~~~l~~l~~~~~ 268 (764)
.++|+++.. +.+++++++.+++.|+++.+
T Consensus 354 ~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~ 385 (405)
T 2vi8_A 354 SGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLK 385 (405)
T ss_dssp SEEEEECHHHHHTTCCHHHHHHHHHHHHHHHT
T ss_pred CceEEeeeeeeecCCCHHHHHHHHHHHHHHHh
Confidence 579998764 35789999999999988754
No 330
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=97.97 E-value=7.7e-05 Score=81.28 Aligned_cols=207 Identities=11% Similarity=-0.009 Sum_probs=121.9
Q ss_pred EEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceeccccccc-------c--
Q psy13453 39 RLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGGVLRRV-------Y-- 104 (764)
Q Consensus 39 ~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa~l~~~-------y-- 104 (764)
+.+|+++++.+|+++|+++|++.+ +-+++.+.+++ |...|++++++ ++++++|.+.... .
T Consensus 146 ~~~~~~~~~~~d~~~l~~~i~~~~----~~~v~~~~~~~--~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~ 219 (420)
T 3gbx_A 146 VPYGIDESGKIDYDEMAKLAKEHK----PKMIIGGFSAY--SGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNP 219 (420)
T ss_dssp EEEEECTTCSCCHHHHHHHHHHHC----CSEEEECCTTC--CSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCS
T ss_pred EeccCCccCCcCHHHHHHHHHhcC----CeEEEEecCcc--CCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcc
Confidence 455677889999999999998741 22444444443 56888988876 8999999963100 0
Q ss_pred ---ceeeeecCCCccc---ccccccc----cc-------CCcccCCCC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHH
Q psy13453 105 ---SSCLVPRGQKSLR---TTVLFHF----LF-------QHWQIPLGR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAK 166 (764)
Q Consensus 105 ---~s~ll~rd~~~l~---~~~s~~~----d~-------~d~tle~SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~ 166 (764)
..+++..-.+.+. ..+-... .+ ...+..++- ......+++++.....+++.++.++..+.++
T Consensus 220 ~~~~di~~~s~sK~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~ 299 (420)
T 3gbx_A 220 VPHAHVVTTTTHKTLAGPRGGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAK 299 (420)
T ss_dssp TTTSSEEEEESSGGGCSCSCEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHH
T ss_pred cccCCEEEeecccCCCCCCceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHH
Confidence 0011111111111 0000000 00 000111111 2222355666766667889999999999999
Q ss_pred HHHHHHhcCCCeEEeCC-CCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEe------ceeCCe
Q psy13453 167 KFADLVEQDDRFELVCP-PSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVK------GSFQDR 239 (764)
Q Consensus 167 ~l~~~I~~~p~~ell~~-P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~------t~l~g~ 239 (764)
++.+.|++ .+++++.+ +..+.+.+.+.+.+ .+ ...+.+.|.+.|..+... ...-+.
T Consensus 300 ~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~--------------~~--~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~ 362 (420)
T 3gbx_A 300 AMVEVFLN-RGYKVVSGGTENHLFLLDLVDKN--------------LT--GKEADAALGRANITVNKNSVPNDPKSPFVT 362 (420)
T ss_dssp HHHHHHHH-TTCEEGGGSCSSSEEEEECGGGT--------------CC--HHHHHHHHHHTTEECEEECCTTCSSCTTTC
T ss_pred HHHHHHHh-cCCeeccCCCCCeEEEEEcCCCC--------------CC--HHHHHHHHHHCCcEeccccCCCCccccCCC
Confidence 99999998 68998764 34556666543211 11 246677787888765441 111233
Q ss_pred eEEEEeccCCC---CCHHHHHHHHHHHHHHHH
Q psy13453 240 LFMRFAICSSQ---TEESDVQLGWNEIRTATE 268 (764)
Q Consensus 240 ~~LRi~v~np~---Tt~e~i~~~l~~l~~~~~ 268 (764)
..+|+++.... .++++++.+++.|+++.+
T Consensus 363 ~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~ 394 (420)
T 3gbx_A 363 SGIRIGSPAVTRRGFKEAEVKELAGWMCDVLD 394 (420)
T ss_dssp SEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred cceEEecchhcccCCCHHHHHHHHHHHHHHHh
Confidence 46999875443 468999999999887653
No 331
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=97.21 E-value=1e-06 Score=99.69 Aligned_cols=164 Identities=15% Similarity=0.028 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+..+.++.+.|+++++ .. ...+|+++||+||..|+.+||... .+ +-+|.....-
T Consensus 139 ~~~~~~Lae~L~~~~p-~~---------~~v~~~nSGseA~~~Aik~ar~~t-gr---------------~~ii~~~~~y 192 (465)
T 2yky_A 139 TENEALFAEAVCDRFP-SI---------DLVRFTNSGTEANLMALATATAIT-GR---------------KTVLAFDGGY 192 (465)
Confidence 4556666677777773 11 136799999999999999987531 10 1134444445
Q ss_pred chhHHHHH---HhCCC--ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc----HHHHHHHHH
Q psy13453 641 NSSVEKSA---IIGDV--PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN----LEELGPICQ 711 (764)
Q Consensus 641 H~Sv~kAa---~~lGl--~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp----l~eIa~i~~ 711 (764)
|-+..-+. ...|+ .+..+|- -|+++|+++|++. +..+.+|++.--..++|.+-+ +++|+++|+
T Consensus 193 HG~~~~~~sg~~~~g~~~~~~~~~~-----~d~~~l~~~l~~~---~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~ 264 (465)
T 2yky_A 193 HGGLLNFASGHAPTNAPYHVVLGVY-----NDVEGTADLLKRH---GHDCAAILVEPMLGAGGCVPAERAFLDLLRAEAS 264 (465)
Confidence 54333222 11233 2233332 3789999999752 122435554433344787666 999999999
Q ss_pred hcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCceee
Q psy13453 712 EYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSAM 763 (764)
Q Consensus 712 ~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~l 763 (764)
+||++|++|.+|. + ...+.+.....|+ ..|-+ .+.|+++..+..|++
T Consensus 265 ~~g~llI~DEv~~-~-r~g~~~a~~~~gv-~pDi~--t~sK~lg~G~piG~v 311 (465)
T 2yky_A 265 RCGALLIFDEVMT-S-RLSGGGAQEMLGI-SADLT--TLGKYIGGGMSFGAF 311 (465)
Confidence 9999999999999 4 2211111111233 34655 456999875555654
No 332
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=97.95 E-value=2.9e-05 Score=84.51 Aligned_cols=215 Identities=11% Similarity=0.065 Sum_probs=130.6
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC--CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD--SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS---- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~--~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~---- 90 (764)
.|.++..++...|... +.||+++ ++.+|+++|+++|++. +-+++-+.++.++|.+=| ++++++
T Consensus 134 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~d~~~l~~~l~~~-----~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~ 205 (389)
T 1o4s_A 134 VWVSYIPQIILAGGTV---NVVETFMSKNFQPSLEEVEGLLVGK-----TKAVLINSPNNPTGVVYRREFLEGLVRLAKK 205 (389)
T ss_dssp CCTTHHHHHHHTTCEE---EEEECCGGGTTCCCHHHHHHTCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHcCCEE---EEEecCCccCCCCCHHHHHHhcccC-----ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 5678889999999876 8999984 5789999999998642 224445677889999844 777665
Q ss_pred -CCCceeccccccc-cc----e-----------eeeecCCCccc-cccccccccCCc---------ccCCCCcccHHHHH
Q psy13453 91 -NGPLKVGGVLRRV-YS----S-----------CLVPRGQKSLR-TTVLFHFLFQHW---------QIPLGRRFRALKLW 143 (764)
Q Consensus 91 -~~wlHVDa~l~~~-y~----s-----------~ll~rd~~~l~-~~~s~~~d~~d~---------tle~SRr~~ALklW 143 (764)
++++++|.+.... +. + +++..-.+.+- ..+...+-+.+. ...++-....+..+
T Consensus 206 ~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~ 285 (389)
T 1o4s_A 206 RNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTSCINTVAQY 285 (389)
T ss_dssp HTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTCSCCHHHHH
T ss_pred cCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHhhhcccCCCHHHHH
Confidence 8899999964311 10 1 01111111110 000000000000 00001122344555
Q ss_pred HHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEE-EeeccccccccccccCccCCccHHHHHHHHH
Q psy13453 144 MTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCF-RLKVRFWDKLDNLFGTISFGDNDLNKAVYDR 222 (764)
Q Consensus 144 atL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~F-ry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~ 222 (764)
++...+.. ++.++.++..+.++++.+.|++. +++++. |+-+.++| ++ | . + ..++.++
T Consensus 286 a~~~~l~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~-~--~------------~----~~~l~~~ 343 (389)
T 1o4s_A 286 AALKALEV-DNSYMVQTFKERKNFVVERLKKM-GVKFVE-PEGAFYLFFKV-R--G------------D----DVKFCER 343 (389)
T ss_dssp HHHHHTTC-CCHHHHHHHHHHHHHHHHHHHHT-TCCCCC-CSBSSEEEEEC-S--S------------C----HHHHHHH
T ss_pred HHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhc-CCeeec-CCcceEEEEeC-C--C------------C----HHHHHHH
Confidence 55555543 27788888889999999999987 787654 55454443 33 1 0 1 2467788
Q ss_pred HH-hcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 223 II-ARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 223 L~-~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
|. +.|..+..........++|+++.+ ++++++.+++.|.++.
T Consensus 344 l~~~~gi~v~~g~~f~~~~~~Ris~~~---~~~~l~~~l~~l~~~l 386 (389)
T 1o4s_A 344 LLEEKKVALVPGSAFLKPGFVRLSFAT---SIERLTEALDRIEDFL 386 (389)
T ss_dssp HHHHHCEECEEGGGGTCTTEEEEECCS---CHHHHHHHHHHHHHHH
T ss_pred HHHHCCEEEeCchhcCCCCeEEEEEeC---CHHHHHHHHHHHHHHH
Confidence 86 778765544333223489998873 7889999998887654
No 333
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=97.94 E-value=0.00013 Score=79.39 Aligned_cols=219 Identities=10% Similarity=-0.011 Sum_probs=133.7
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
.|.+...+++..|... +.||+ +|+++|+++|++... +++-+++-+....++|.+.|++++++ ++++
T Consensus 136 ~~~~~~~~~~~~g~~~---~~v~~-----~d~~~l~~~l~~~~~-~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~l 206 (398)
T 3a2b_A 136 DHASIIDGSRLSFSKV---IKYGH-----NNMEDLRAKLSRLPE-DSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAV 206 (398)
T ss_dssp CCHHHHHHHHHSSSEE---EEECT-----TCHHHHHHHHHTSCS-SSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEE
T ss_pred cCHHHHHHHHHcCCce---EEeCC-----CCHHHHHHHHHhhcc-CCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEE
Confidence 6888999999999876 77876 689999999986321 22234455666788999999999886 8999
Q ss_pred eeccccccc-cc----e------------eeeecCCCccc--ccccc-ccc----c----CCcccCCCCcccHH-HHHHH
Q psy13453 95 KVGGVLRRV-YS----S------------CLVPRGQKSLR--TTVLF-HFL----F----QHWQIPLGRRFRAL-KLWMT 145 (764)
Q Consensus 95 HVDa~l~~~-y~----s------------~ll~rd~~~l~--~~~s~-~~d----~----~d~tle~SRr~~AL-klWat 145 (764)
++|.+.... ++ + +++..-.+.+. +.+-. ..+ + ..+...++-..... .+..+
T Consensus 207 i~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~ 286 (398)
T 3a2b_A 207 MVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLGGFVAGDADVIDFLKHNARSVMFSASMTPASVASTLKA 286 (398)
T ss_dssp EEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSCEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHH
T ss_pred EEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCCcEEEeCHHHHHHHHHhcccceecCCCCHHHHHHHHHH
Confidence 999965211 11 0 01101111111 00000 000 0 00111111111111 23445
Q ss_pred HHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHh
Q psy13453 146 LRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIA 225 (764)
Q Consensus 146 L~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~ 225 (764)
|+.+ +.+.++.++..+.++++.+.|++. +++++ +|..+++.+++. . ..-..++.++|.+
T Consensus 287 l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~~~~~-~----------------~~~~~~l~~~l~~ 345 (398)
T 3a2b_A 287 LEII--QNEPEHIEKLWKNTDYAKAQLLDH-GFDLG-ATESPILPIFIR-S----------------NEKTFWVTKMLQD 345 (398)
T ss_dssp HHHH--HHCTHHHHHHHHHHHHHHHHHHHT-TCCBC-SCCSSEEEEECC-C----------------HHHHHHHHHHHHH
T ss_pred HHHH--hhCHHHHHHHHHHHHHHHHHHHhc-CCCcC-CCCCCEEEEEcC-C----------------HHHHHHHHHHHHH
Confidence 5543 335677888889999999999987 77765 455666666542 1 1113578889998
Q ss_pred cCcEEEEecee---CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 226 RKVIYIVKGSF---QDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 226 ~G~~~vs~t~l---~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
+|......... .+..++|+++.. .+++++++.+++.|+++.++
T Consensus 346 ~gi~v~~~~~~~~~~~~~~iRis~~~-~~~~e~i~~~~~~l~~~l~~ 391 (398)
T 3a2b_A 346 DGVFVNPVVSPAVPAEESLIRFSLMA-THTYDQIDEAIEKMVKVFKQ 391 (398)
T ss_dssp TTEECEEECTTTSCGGGCEEEEECCT-TCCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEeeCCCCCCCCCceEEEEEeC-CCCHHHHHHHHHHHHHHHHH
Confidence 98765443322 135689997664 45789999999999988755
No 334
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=97.94 E-value=0.00014 Score=78.23 Aligned_cols=213 Identities=8% Similarity=0.013 Sum_probs=131.5
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhh---c----CC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPV---S----NG 92 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia---~----~~ 92 (764)
.+.+...++...|... +.||+++++.+|+++|+++|+ . +-+++-+.++.++|.+=|.+++. + ++
T Consensus 109 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~i~-~-----~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~ 179 (356)
T 1fg7_A 109 TYGMYSVSAETIGVEC---RTVPTLDNWQLDLQGISDKLD-G-----VKVVYVCSPNNPTGQLINPQDFRTLLELTRGKA 179 (356)
T ss_dssp SCTHHHHHHHHHTCEE---EECCCCTTSCCCHHHHHTSCT-T-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHTTTC
T ss_pred ChHHHHHHHHHcCCEE---EEeeCCCCCCCCHHHHHHHhc-C-----CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 4566778888899876 889998888999999999885 2 22444467899999997665543 2 67
Q ss_pred Cceecccccccc--ce-----------eeeecCCCccc-cccccccccCCc-------ccCCCCcccHHHHHHHHHHccH
Q psy13453 93 PLKVGGVLRRVY--SS-----------CLVPRGQKSLR-TTVLFHFLFQHW-------QIPLGRRFRALKLWMTLRSYGL 151 (764)
Q Consensus 93 wlHVDa~l~~~y--~s-----------~ll~rd~~~l~-~~~s~~~d~~d~-------tle~SRr~~ALklWatL~~lG~ 151 (764)
++++|.+..... .+ +++..-.+.+- .-+...+-+.+. .....-....+..+++...+..
T Consensus 180 ~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~ 259 (356)
T 1fg7_A 180 IVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQALSP 259 (356)
T ss_dssp EEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHHHHHHHHHSCSSCSCHHHHHHHHHHTSH
T ss_pred EEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCHHHHHHHHHhcCCCCCCHHHHHHHHHHhcC
Confidence 889998642110 01 11111111110 000000000000 0000013556777888888877
Q ss_pred HH---HHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCc
Q psy13453 152 KG---LQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKV 228 (764)
Q Consensus 152 eG---y~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~ 228 (764)
.+ +.++.++..+..+++.+.|++.+++..+.++.-+.+.++.. + ..++.++|.+.|.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~------------------~--~~~l~~~L~~~gI 319 (356)
T 1fg7_A 260 QGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK------------------A--SSAVFKSLWDQGI 319 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET------------------T--HHHHHHHHHHTTE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC------------------C--HHHHHHHHHHCCE
Confidence 66 57777888889999999999987754455555556655541 0 1467888888887
Q ss_pred EEEE-eceeCCeeEEEEeccCCCCCHHHHHHHHHHHHH
Q psy13453 229 IYIV-KGSFQDRLFMRFAICSSQTEESDVQLGWNEIRT 265 (764)
Q Consensus 229 ~~vs-~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~ 265 (764)
.... ........++|+++. ++++++.+++.+++
T Consensus 320 ~v~~~g~~~~~~~~iRis~~----~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 320 ILRDQNKQPSLSGCLRITVG----TREESQRVIDALRA 353 (356)
T ss_dssp ECEECTTSTTCTTEEEEECC----CHHHHHHHHHHHHT
T ss_pred EEEECCCCCCCCCeEEEEeC----CHHHHHHHHHHHHh
Confidence 6544 222211348999875 47899999888764
No 335
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=97.93 E-value=0.00012 Score=83.08 Aligned_cols=242 Identities=8% Similarity=-0.054 Sum_probs=138.9
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC--CCcccHHHHHHHHHHHhhCCCCc-EEEEeeCCcccccc---cCchhhhc---
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD--SEWLAYLTLRTIYESFRKSFLCP-MCSGYCGRTLHQDI---QSLNAPVS--- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~--~~rmD~~aLe~~I~~~~~~G~~p-~~VatAGTT~~G~i---Dpi~~ia~--- 90 (764)
.|.++..++..+|... +.+|+++ ++.+|+++|+++|++....|..+ ++|-+.++.++|.+ +.+.++++
T Consensus 191 ~y~~~~~~~~~~g~~~---~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~ 267 (500)
T 3tcm_A 191 QYPLYSASIALHGGAL---VPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCK 267 (500)
T ss_dssp CCTHHHHHHHHTTCEE---EEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CcHhHHHHHHHcCCEE---EEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHH
Confidence 5678888999999876 9999985 46999999999999876666555 34566788899998 55666643
Q ss_pred --CCCceeccccccc-c------ce----------------ee-eecCCCccc--cccccccccC---Cccc--------
Q psy13453 91 --NGPLKVGGVLRRV-Y------SS----------------CL-VPRGQKSLR--TTVLFHFLFQ---HWQI-------- 131 (764)
Q Consensus 91 --~~wlHVDa~l~~~-y------~s----------------~l-l~rd~~~l~--~~~s~~~d~~---d~tl-------- 131 (764)
++++++|...... | .+ ++ +..-.+.+. ..+...+-.. +..+
T Consensus 268 ~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~ 347 (500)
T 3tcm_A 268 NEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIA 347 (500)
T ss_dssp HHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHH
T ss_pred HcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHH
Confidence 8999999864211 1 11 01 111111110 0000000000 0000
Q ss_pred CCCCcccHHHHHHHHHHcc------------HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEE-Eee-ccc
Q psy13453 132 PLGRRFRALKLWMTLRSYG------------LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCF-RLK-VRF 197 (764)
Q Consensus 132 e~SRr~~ALklWatL~~lG------------~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~F-ry~-P~~ 197 (764)
...-....+..+++...+. .+-..++.++.-+.++++.+.|+++|++++. +|+-+..+| +.. |..
T Consensus 348 ~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~~lp~~ 426 (500)
T 3tcm_A 348 SVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCN-EAEGAMYVFPQICLPQK 426 (500)
T ss_dssp HTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECC-CCCBTTEECCEECCCHH
T ss_pred hcccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEe-cCCeEEEEeeeecCchh
Confidence 0000112222333332221 1234455566778888999999999999864 677776666 221 111
Q ss_pred cccccccccCccCCccHHHHHHHHHHHhcCcEEEEecee---CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHcc
Q psy13453 198 WDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSF---QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLRG 273 (764)
Q Consensus 198 ~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l---~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~~ 273 (764)
...... ..+...-...+.+.|.+.|.+++..+.. .+...+|++++ +++++++.+++.|.++.++++++
T Consensus 427 ~~~~~~-----~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~---~~~e~i~~~i~~l~~~~~~~~~~ 497 (500)
T 3tcm_A 427 AIEAAK-----AANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL---PQEDKIPAVISRFTVFHEAFMSE 497 (500)
T ss_dssp HHHHHH-----HHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC---SCTTTHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHH-----hcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC---CCHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 0001111122346666778876654332 45678999988 57789999999999988877653
No 336
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=97.93 E-value=0.0002 Score=78.01 Aligned_cols=218 Identities=12% Similarity=0.004 Sum_probs=125.0
Q ss_pred HHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceeccccc
Q psy13453 27 ATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGGVLR 101 (764)
Q Consensus 27 Aa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa~l~ 101 (764)
.....|.+. .++.+++++++.+|+++|+++|++.. +-+++.+-++ .|.+.|++++++ ++++++|.+..
T Consensus 130 ~~~~~g~~~-~~~~~~~~~~~~~d~~~l~~~i~~~~----~~~v~~~~~~--~G~~~~l~~i~~l~~~~~~~li~Dea~~ 202 (417)
T 3n0l_A 130 KVSSSGKMY-ESCFYGVELDGRIDYEKVREIAKKEK----PKLIVCGASA--YARVIDFAKFREIADEIGAYLFADIAHI 202 (417)
T ss_dssp ------CCS-EEEEECCCTTSSCCHHHHHHHHHHHC----CSEEEECCSS--CCSCCCHHHHHHHHHHHTCEEEEECTTT
T ss_pred hhhhhccee-eeEeccCCCCCCcCHHHHHHHHHhcC----CeEEEECCcc--cCccCCHHHHHHHHHHcCCEEEEECccc
Confidence 344555444 23566788889999999999998531 2244444444 499999999876 89999999631
Q ss_pred c--------c----cceeeeecCCCcccc---cccccc--c-------cCCcccCCCCc-ccHHHHHHHHHHccHHHHHH
Q psy13453 102 R--------V----YSSCLVPRGQKSLRT---TVLFHF--L-------FQHWQIPLGRR-FRALKLWMTLRSYGLKGLQA 156 (764)
Q Consensus 102 ~--------~----y~s~ll~rd~~~l~~---~~s~~~--d-------~~d~tle~SRr-~~ALklWatL~~lG~eGy~~ 156 (764)
. + ...++...-.+.+.. .+-... + ....+..++-. .....+++++.....+++.+
T Consensus 203 ~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~ 282 (417)
T 3n0l_A 203 AGLVVAGEHPSPFPYAHVVSSTTHKTLRGPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKV 282 (417)
T ss_dssp HHHHHTTSSCCCTTTCSEEEEESSTTTCSCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHH
T ss_pred hhhhhcccCCCccccceEEEeeCccccCCCCeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHH
Confidence 0 0 001222211122211 000000 0 01112222221 22235566777767788999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEeCC-CCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEece
Q psy13453 157 YLRKHISLAKKFADLVEQDDRFELVCP-PSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGS 235 (764)
Q Consensus 157 ~i~~~i~lA~~l~~~I~~~p~~ell~~-P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~ 235 (764)
+.++..++++++.+.|++ .+++++.. ...+.+.+.+.+.+ .+ ...+.+.|.+.|........
T Consensus 283 ~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~--------------~~--~~~~~~~l~~~gi~v~~~~~ 345 (417)
T 3n0l_A 283 YAKQVRTNAQVLANVLMD-RKFKLVSDGTDNHLVLMSFLDRE--------------FS--GKDADLALGNAGITANKNTV 345 (417)
T ss_dssp HHHHHHHHHHHHHHHHHH-TTCEEGGGSCSSSEEEEECTTSS--------------SC--HHHHHHHHHHTTEECEECCC
T ss_pred HHHHHHHHHHHHHHHHHh-CCceeccCCCCceEEEEEcccCC--------------CC--HHHHHHHHHHcCeEEecccc
Confidence 999999999999999998 78988763 33444555443211 11 14677778888875432210
Q ss_pred -e-----CCeeEEEEeccC---CCCCHHHHHHHHHHHHHHHH
Q psy13453 236 -F-----QDRLFMRFAICS---SQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 236 -l-----~g~~~LRi~v~n---p~Tt~e~i~~~l~~l~~~~~ 268 (764)
. -....+|+.... ...++++++.+++.|+++.+
T Consensus 346 ~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~ 387 (417)
T 3n0l_A 346 PGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILD 387 (417)
T ss_dssp TTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHh
Confidence 0 113568987532 23578999999999987754
No 337
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=97.92 E-value=6.4e-05 Score=84.71 Aligned_cols=162 Identities=13% Similarity=0.051 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcc
Q psy13453 562 ELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSN 641 (764)
Q Consensus 562 ~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH 641 (764)
..|.++.+.+++++..- ....|+++|||||..|+++||....+ +-+|.....-|
T Consensus 127 ~~~~~lae~l~~~~p~~----------~~v~f~~SGsEA~e~AiklAr~~tgr----------------~~ii~~~~~yH 180 (454)
T 4ao9_A 127 LLEGRLARLICERFPQI----------EQLRFTNSGTEANLMALTAALHFTGR----------------RKIVVFSGGYH 180 (454)
T ss_dssp SSHHHHHHHHHHHSTTC----------SEEEEESSHHHHHHHHHHHHHHHHTC----------------CEEEEETTCBC
T ss_pred HHHHHHHHHHHHhCCCC----------CEEEEeCchHHHHHHHHHHHHhcccC----------------CeEEEEeCCcC
Confidence 35566677788877432 24689999999999999999976421 11333333444
Q ss_pred hhHHHHHHhC---CC--ceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc----HHHHHHHHHh
Q psy13453 642 SSVEKSAIIG---DV--PVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN----LEELGPICQE 712 (764)
Q Consensus 642 ~Sv~kAa~~l---Gl--~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp----l~eIa~i~~~ 712 (764)
-...-+.... +. ....+|-+ |++++++.|++... ...+|++=--..+.|.+-| |++|+++|++
T Consensus 181 G~t~~~~~~~~~~~~~~~~~~~p~n-----d~~~l~~~l~~~~~---~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~ 252 (454)
T 4ao9_A 181 GGVLGFGARPSPTTVPFDFLVLPYN-----DAQTARAQIERHGP---EIAVVLVEPMQGASGCIPGQPDFLQALRESATQ 252 (454)
T ss_dssp STTCBBSSSBCTTSCCSEEEEECTT-----CHHHHHHHHHHTGG---GEEEEEECSEESTTTCEECCHHHHHHHHHHHHH
T ss_pred CccccccccccCccCCCCcccCCCc-----hHHHHHHHHhhcCC---ceEEEEeccccCCCCccCCchhhHHHHHHHHhh
Confidence 3211110000 11 23334432 68899999976432 2445544333344577766 9999999999
Q ss_pred cCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCcee
Q psy13453 713 YNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSA 762 (764)
Q Consensus 713 ~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~ 762 (764)
||++|++|-.+.| ....-+....-|+ ..|-+|+. |.++.-+..|+
T Consensus 253 ~g~lLI~DEV~tG--R~G~~~a~e~~gv-~PDi~t~g--K~lggG~Piga 297 (454)
T 4ao9_A 253 VGALLVFDEVMTS--RLAPHGLANKLGI-RSDLTTLG--KYIGGGMSFGA 297 (454)
T ss_dssp HTCEEEEECTTGG--GGSTTCHHHHHTC-CCSEEEEE--GGGGTTSSCEE
T ss_pred cCCEEEEECCCcC--CCccccchhccCC-CCcEEEec--cccCCCCccee
Confidence 9999999988865 2222222223366 46887765 44443344444
No 338
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=97.91 E-value=0.00014 Score=82.63 Aligned_cols=219 Identities=14% Similarity=0.015 Sum_probs=123.8
Q ss_pred HHhhcCCCCCCeEEecCC-CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceecccc
Q psy13453 27 ATHSLSGTPDQVRLSGLP-DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGGVL 100 (764)
Q Consensus 27 Aa~~LGl~~~~v~~Vpvd-~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa~l 100 (764)
++.+.|... .++.+++| +++.+|+++|+++|.+.+ .-+++. +.+.+|.+.|++++++ ++++|+|+++
T Consensus 168 ~i~~~g~~~-~~~~~~vd~~~~~iD~d~le~~l~~~~----~klIi~--~~s~~~~~~dl~~i~~ia~~~g~~livD~Ah 240 (490)
T 2a7v_A 168 RISATSIFF-ESMPYKLNPKTGLIDYNQLALTARLFR----PRLIIA--GTSAYARLIDYARMREVCDEVKAHLLADMAH 240 (490)
T ss_dssp --------------CCBCTTTCSBCHHHHHHHHHHHC----CSEEEE--CCSSCCSCCCHHHHHHHHHHTTCEEEEECGG
T ss_pred hHHHcCCeE-EEEecccccccCCcCHHHHHHHHhhcC----CcEEEE--cCCCCCCcccHHHHHHHHHHcCCEEEEcccc
Confidence 455666554 12344556 579999999999997642 124443 3344566777888775 8999999963
Q ss_pred c-----------------------cc-----cceeeeecCCCcc---------ccccccccc-cCCcccCCCCcccHH-H
Q psy13453 101 R-----------------------RV-----YSSCLVPRGQKSL---------RTTVLFHFL-FQHWQIPLGRRFRAL-K 141 (764)
Q Consensus 101 ~-----------------------~~-----y~s~ll~rd~~~l---------~~~~s~~~d-~~d~tle~SRr~~AL-k 141 (764)
. ++ .+++++.++.... ...+...++ ....+++++.....+ .
T Consensus 241 ~~glv~~g~~~~~~~~aDiv~~S~hK~l~Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaA 320 (490)
T 2a7v_A 241 ISGLVAAKVIPSPFKHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAA 320 (490)
T ss_dssp GHHHHHTTSSCCGGGTCSEEEEESSGGGCSCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHH
T ss_pred ccccccCCcCCCCCCCCCEEEECCcccCccccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHH
Confidence 1 11 1234444432000 000000001 112334555433333 3
Q ss_pred HHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC-CCceeEEEEeeccccccccccccCccCCccHHHHHHH
Q psy13453 142 LWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCP-PSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVY 220 (764)
Q Consensus 142 lWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~-P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~ 220 (764)
+-++++..-.+++.++.++..+++++|++.|++. +|+++.. .+..++.+...+.+ .+ -.++.
T Consensus 321 la~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~-G~~v~~~~t~t~lv~vdl~~~g--------------~~--~~~~~ 383 (490)
T 2a7v_A 321 VAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPKG--------------LD--GARAE 383 (490)
T ss_dssp HHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTTTT--------------CC--HHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCCCeEEEEEeCCCC--------------CC--HHHHH
Confidence 3445665545677889999999999999999985 9999853 45566666554321 11 14577
Q ss_pred HHHHhcCcEEEEeceeC------CeeEEEEec---cCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 221 DRIIARKVIYIVKGSFQ------DRLFMRFAI---CSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 221 ~~L~~~G~~~vs~t~l~------g~~~LRi~v---~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
+.|.+.|.. ++...+- .+..||+.+ ++...+++|++.+.+.|.++....
T Consensus 384 ~~L~~~GI~-v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~~ 441 (490)
T 2a7v_A 384 RVLELVSIT-ANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIG 441 (490)
T ss_dssp HHHHHTTEE-CEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCeE-EecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHhh
Confidence 778778864 3322211 136799943 344568999999999998876543
No 339
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=97.91 E-value=6.6e-05 Score=81.29 Aligned_cols=216 Identities=11% Similarity=0.042 Sum_probs=127.5
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC-CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc-----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD-SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS----- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~-~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~----- 90 (764)
.|.++..+++..|... +.||+++ ++.+|+++|+++|++. +-+++-+.++.++|.+=| ++++++
T Consensus 124 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~d~~~l~~~l~~~-----~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~ 195 (386)
T 1u08_A 124 SYDSYAPAIALSGGIV---KRMALQPPHFRVDWQEFAALLSER-----TRLVILNTPHNPSATVWQQADFAALWQAIAGH 195 (386)
T ss_dssp CCTTHHHHHHHTTCEE---EEEECCTTTCCCCHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHTTS
T ss_pred CchhHHHHHHHcCCEE---EEeecCcccCcCCHHHHHHhhccc-----CEEEEEeCCCCCCCccCCHHHHHHHHHHHHHc
Confidence 4678888999999876 8999986 6899999999998532 224445578889999865 455543
Q ss_pred CCCceeccccccc-cc-----eeeee---cCCC----ccccccc-----cccccCCc-----------ccCCCCcccHHH
Q psy13453 91 NGPLKVGGVLRRV-YS-----SCLVP---RGQK----SLRTTVL-----FHFLFQHW-----------QIPLGRRFRALK 141 (764)
Q Consensus 91 ~~wlHVDa~l~~~-y~-----s~ll~---rd~~----~l~~~~s-----~~~d~~d~-----------tle~SRr~~ALk 141 (764)
++|+++|...... |. ++.-. .+.. ++...+. ..+-+... .... ....+.
T Consensus 196 ~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~--~~~~~~ 273 (386)
T 1u08_A 196 EIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTF--SVNTPA 273 (386)
T ss_dssp CCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHHHHHHTS--SCCHHH
T ss_pred CcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHHHHHHHHHHHHhhcc--CCChHH
Confidence 7899999965321 10 11000 0000 0000010 00000000 0001 112222
Q ss_pred ---HHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHH
Q psy13453 142 ---LWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKA 218 (764)
Q Consensus 142 ---lWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~ 218 (764)
+..+|+. +.+.+.++.++..+.++++.+.|++. ++++..+..-..+.+++...+ ..+ ..+
T Consensus 274 ~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~-------------~~~--~~~ 336 (386)
T 1u08_A 274 QLALADMLRA-EPEHYLALPDFYRQKRDILVNALNES-RLEILPCEGTYFLLVDYSAVS-------------TLD--DVE 336 (386)
T ss_dssp HHHHHHHHHH-CTHHHHTHHHHHHHHHHHHHHHTTSS-SCEECCCCBSSEEEEECTTTC-------------CSC--HHH
T ss_pred HHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCceEEEEEecCCCC-------------CCC--HHH
Confidence 2233332 36678888888999999999999987 888765433345666552100 011 246
Q ss_pred HHHHHH-hcCcEEEEecee----CCeeEEEEeccCCCCCHHHHHHHHHHHHH
Q psy13453 219 VYDRII-ARKVIYIVKGSF----QDRLFMRFAICSSQTEESDVQLGWNEIRT 265 (764)
Q Consensus 219 L~~~L~-~~G~~~vs~t~l----~g~~~LRi~v~np~Tt~e~i~~~l~~l~~ 265 (764)
+.++|. +.|..+...... .+..++|+++.+ ++++++.+++.|++
T Consensus 337 ~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~---~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 337 FCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK---KESTLLAAAERLRQ 385 (386)
T ss_dssp HHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS---CHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcC---CHHHHHHHHHHHhh
Confidence 777776 568765543333 246789998863 78999999888753
No 340
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=97.88 E-value=3.4e-05 Score=91.88 Aligned_cols=243 Identities=8% Similarity=-0.050 Sum_probs=133.2
Q ss_pred eeeeHHHH-HhhcCCCCCCeEEecCCCC-----CcccHHHH-----HHHHHHH-hh---CCCC-cEEEEeeCCccccccc
Q psy13453 20 LIYESFKA-THSLSGTPDQVRLSGLPDS-----EWLAYLTL-----RTIYESF-RK---SFLC-PMCSGYCGRTLHQDIQ 83 (764)
Q Consensus 20 ~~YSv~KA-a~~LGl~~~~v~~Vpvd~~-----~rmD~~aL-----e~~I~~~-~~---~G~~-p~~VatAGTT~~G~iD 83 (764)
.|+|+..+ +.+.|... +.++.+.+ +.+|+++| +++|+++ .. .++. -+++.+.+| ++|.+.
T Consensus 222 ~H~S~~~~~~~l~Ga~~---v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn-~~G~v~ 297 (730)
T 1c4k_A 222 NHKSVYNSALAMAGGRP---VYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGT-YDGTIY 297 (730)
T ss_dssp CCHHHHHHHTTTTCCEE---EEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBC-TTSEEE
T ss_pred chHHHHHHHHHHCCCEE---EEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCC-CCCeec
Confidence 68999998 88888766 77777532 45899999 7777643 11 1111 245556675 699999
Q ss_pred Cchhhhc-----CCCceecccccc--ccce------eeee----cCCCccccccccccccC-----------CcccCCC-
Q psy13453 84 SLNAPVS-----NGPLKVGGVLRR--VYSS------CLVP----RGQKSLRTTVLFHFLFQ-----------HWQIPLG- 134 (764)
Q Consensus 84 pi~~ia~-----~~wlHVDa~l~~--~y~s------~ll~----rd~~~l~~~~s~~~d~~-----------d~tle~S- 134 (764)
|++++++ ++++|||+++.. .++. .+-. -+....-..++.+-.++ +-.+.++
T Consensus 298 dl~~I~~la~~~g~~livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g~~ 377 (730)
T 1c4k_A 298 NAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQL 377 (730)
T ss_dssp CHHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTTST
T ss_pred CHHHHHHHHHHcCCeEEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhcCcc
Confidence 9999886 889999997531 1110 0100 00000000001100000 0011111
Q ss_pred ------------------Ccc-c-HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEeCCCCc-------
Q psy13453 135 ------------------RRF-R-ALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQ-DDRFELVCPPSM------- 186 (764)
Q Consensus 135 ------------------Rr~-~-ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~-~p~~ell~~P~l------- 186 (764)
-.. . ...+-+++..+-.++..+++++..++++++++.|++ +++|+++.+...
T Consensus 378 ~~i~~~~~~~~~~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~ 457 (730)
T 1c4k_A 378 RYCDHKHFNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWED 457 (730)
T ss_dssp TCCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGG
T ss_pred cccCHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccc
Confidence 100 0 112333455555545577889999999999999999 899999765320
Q ss_pred -------eeEEEEeeccccccc------------cc---cccCc--------cCCccHHHHHHHHHHHhcCcEEEEecee
Q psy13453 187 -------GLVCFRLKVRFWDKL------------DN---LFGTI--------SFGDNDLNKAVYDRIIARKVIYIVKGSF 236 (764)
Q Consensus 187 -------~iV~Fry~P~~~~~~------------~~---~~~~~--------~~~~d~~n~~L~~~L~~~G~~~vs~t~l 236 (764)
+-.+|++.|++.... +. ..... -.+...-...+.+.|.++|... . .
T Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v-~---~ 533 (730)
T 1c4k_A 458 GDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIP-E---K 533 (730)
T ss_dssp SCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCC-S---E
T ss_pred cccccccccchhhccCccchhccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEE-E---E
Confidence 001111111111000 00 00000 0000001257888888888632 1 1
Q ss_pred CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 237 QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 237 ~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
-+...+|+ ++++.+++++++.+++.|+++.+++.
T Consensus 534 ~~~~~ir~-~~s~g~t~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 534 SDLNSILF-LMTPAETPAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp ECSSEEEE-ECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEE-EeCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 23456887 46777899999999999999987763
No 341
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=97.86 E-value=8.2e-05 Score=80.39 Aligned_cols=217 Identities=12% Similarity=0.010 Sum_probs=129.2
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
.|.++..+++..|... +.+|. +|+++|+++|++... .+-+++-..++.++|.+.|++++++ ++++
T Consensus 132 ~~~~~~~~~~~~g~~~---~~~~~-----~d~~~l~~~l~~~~~--~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~l 201 (384)
T 1bs0_A 132 SHASLLEAASLSPSQL---RRFAH-----NDVTHLARLLASPCP--GQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWL 201 (384)
T ss_dssp CCHHHHHHHHTSSSEE---EEECT-----TCHHHHHHHHHSCCS--SCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEE
T ss_pred ccHHHHHHHHHcCCCE---EEeCC-----CCHHHHHHHHHhcCC--CCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEE
Confidence 5778888999988766 77774 589999999975321 1223356667889999999999876 8899
Q ss_pred eeccccccc-cc----e----------eeeecCCCcccc--ccc-cccc----cCC--cccCCCCcccHHH---HHHHHH
Q psy13453 95 KVGGVLRRV-YS----S----------CLVPRGQKSLRT--TVL-FHFL----FQH--WQIPLGRRFRALK---LWMTLR 147 (764)
Q Consensus 95 HVDa~l~~~-y~----s----------~ll~rd~~~l~~--~~s-~~~d----~~d--~tle~SRr~~ALk---lWatL~ 147 (764)
++|...... +. + +++..-.+.+.. .+- ...+ +.. .....+-....+. +.++++
T Consensus 202 i~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~ 281 (384)
T 1bs0_A 202 MVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLA 281 (384)
T ss_dssp EEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSCCEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHH
T ss_pred EEECCcccceecCCCCchHHhcCCCCcEEEeeccchhhccCcEEEeCHHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHH
Confidence 999964211 10 0 111011111100 000 0000 000 0000111222333 334455
Q ss_pred HccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcC
Q psy13453 148 SYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARK 227 (764)
Q Consensus 148 ~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G 227 (764)
.+....+.++.++..+.++++.+.|++. ++++. ++..+++.|++.. ..-..++.++|.++|
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~-----------------~~~~~~l~~~l~~~g 342 (384)
T 1bs0_A 282 VIRSDEGDARREKLAALITRFRAGVQDL-PFTLA-DSCSAIQPLIVGD-----------------NSRALQLAEKLRQQG 342 (384)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEEC-SCCSSBCCEEEES-----------------HHHHHHHHHHHHHTT
T ss_pred HHhccccHHHHHHHHHHHHHHHHHHHhc-CCccc-CCCCCEEEEEeCC-----------------HHHHHHHHHHHHHCC
Confidence 4422255678888899999999999987 68876 3555566665521 011357888888888
Q ss_pred cEEEEecee---CCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 228 VIYIVKGSF---QDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 228 ~~~vs~t~l---~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
......... .+..++|+++. ..+++++++.+++.|+++
T Consensus 343 i~v~~~~~~~~~~~~~~~Ri~~~-~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 343 CWVTAIRPPTVPAGTARLRLTLT-AAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp EECCEECTTSSCTTCEEECCBCC-TTCCHHHHHHHHHHHHHH
T ss_pred cEEEeecCCCCCCCCceEEEEEc-CCCCHHHHHHHHHHHHhh
Confidence 754333211 23478999765 455799999999998765
No 342
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=97.86 E-value=0.00019 Score=75.85 Aligned_cols=210 Identities=11% Similarity=-0.013 Sum_probs=128.4
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc----CCCce
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS----NGPLK 95 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~----~~wlH 95 (764)
.|.++..+++..|+.. +.||+++++.+|+++|+++. ++-+++-+.++.++|.+=|++++.+ +.++.
T Consensus 99 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l~~~~-------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~i 168 (337)
T 3p1t_A 99 GFDGYRARIAVSGLRH---FEIGLTDDLLLDPNDLAQVS-------RDDCVVLANPSNPTGQALSAGELDQLRQRAGKLL 168 (337)
T ss_dssp SCSHHHHHHTTSCCEE---EEECBCTTSSBCHHHHTTCC-------TTEEEEEESSCTTTCCCCCHHHHHHHHHHCSEEE
T ss_pred CcHHHHHHHHHcCCEE---EEecCCCCCCCCHHHHHhhc-------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCcEE
Confidence 5677888999999877 99999999999999998762 1224467778899999999988775 33344
Q ss_pred eccccccc-c-c---------eeeeecCCCccc-ccccccc-----c----cCCcccCCCCcccHHHHHHHHHHcc-HHH
Q psy13453 96 VGGVLRRV-Y-S---------SCLVPRGQKSLR-TTVLFHF-----L----FQHWQIPLGRRFRALKLWMTLRSYG-LKG 153 (764)
Q Consensus 96 VDa~l~~~-y-~---------s~ll~rd~~~l~-~~~s~~~-----d----~~d~tle~SRr~~ALklWatL~~lG-~eG 153 (764)
+|.+.... + . .+++..-.+.+- .-+...+ + +... ...-....+...+....+- .+.
T Consensus 169 vDea~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~~~~ 246 (337)
T 3p1t_A 169 IDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRK--QWFCNVGTLDLHALEAALDNDRA 246 (337)
T ss_dssp EECTTGGGSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHTT--SCTTCSCHHHHHHHHHHHTCHHH
T ss_pred EECCChhhccccccccccCCCEEEEeeCchhccCcchheEEEEeCHHHHHHHHhh--cCCCCCCHHHHHHHHHHhCCHHH
Confidence 46643110 0 0 011111111110 0000000 0 0000 0001223333333333332 345
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEe
Q psy13453 154 LQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVK 233 (764)
Q Consensus 154 y~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~ 233 (764)
+.+.+++..+..+++.+.|++. ++++ .+|+.+.+.|+.. +. ..+.+.|.+.|......
T Consensus 247 ~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~~----------------~~----~~~~~~l~~~gi~v~~g 304 (337)
T 3p1t_A 247 REAHIAKTLAQRRRVADALRGL-GYRV-ASSEANFVLVENA----------------AG----ERTLRFLRERGIQVKDA 304 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCCB-CCCSSSEEEEECT----------------TT----HHHHHHHHHTTEECEEG
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-cCEE-CCCCCeEEEEEcC----------------CH----HHHHHHHHHCCeEEEEC
Confidence 7888888899999999999987 7775 4566666666432 11 35667788889765555
Q ss_pred ceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 234 GSFQDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 234 t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
.......++|+++. ++++++.+++.|+++.
T Consensus 305 ~~~~~~~~iRis~~----~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 305 GQFGLHHHIRISIG----REEDNDRLLAALAEYS 334 (337)
T ss_dssp GGGTCCSEEEEECC----CHHHHHHHHHHHHHHT
T ss_pred ccCCCCCeEEEecC----CHHHHHHHHHHHHHHh
Confidence 44433568999876 6899999999988764
No 343
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=97.85 E-value=2.5e-05 Score=85.57 Aligned_cols=219 Identities=11% Similarity=0.014 Sum_probs=130.7
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC---CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc---
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD---SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS--- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~---~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~--- 90 (764)
.|.++..++..+|... +.||+++ ++.+|+++|+++|++. +-+++-+.++.++|.+=| ++++++
T Consensus 119 ~y~~~~~~~~~~g~~~---~~v~~~~~~~~~~~d~~~l~~~l~~~-----~~~v~l~~~~nptG~~~~~~~l~~i~~~~~ 190 (411)
T 2o0r_A 119 FYDSYSPVVAMAGAHR---VTVPLVPDGRGFALDADALRRAVTPR-----TRALIINSPHNPTGAVLSATELAAIAEIAV 190 (411)
T ss_dssp CCTTHHHHHHHTTCEE---EEEECEEETTEEECCHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CcHhHHHHHHHcCCEE---EEeeccccccCCCCCHHHHHHhhccC-----ceEEEEeCCCCCCCCCCCHHHHHHHHHHHH
Confidence 4677888999999876 8999975 4789999999999642 223445678899999844 455554
Q ss_pred --CCCceeccccccc-cc-----ee-----------eeecCCCccc-ccccccc-----c-------cCC-cccCCCCcc
Q psy13453 91 --NGPLKVGGVLRRV-YS-----SC-----------LVPRGQKSLR-TTVLFHF-----L-------FQH-WQIPLGRRF 137 (764)
Q Consensus 91 --~~wlHVDa~l~~~-y~-----s~-----------ll~rd~~~l~-~~~s~~~-----d-------~~d-~tle~SRr~ 137 (764)
++++++|...... +. ++ ++..-.+.+- ..+...+ + ... .+...+ ..
T Consensus 191 ~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~-~~ 269 (411)
T 2o0r_A 191 AANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAELIAGVRAAKQYLSYVGG-AP 269 (411)
T ss_dssp HTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCHHHHHHHHHHHHHHTSCCC-TT
T ss_pred HcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCHHHHHHHHHHHhhccCCCC-hH
Confidence 8899999964211 10 00 0000000000 0000000 0 000 011111 12
Q ss_pred cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCce-eEEEEeeccccccccccccCccCCccHHH
Q psy13453 138 RALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMG-LVCFRLKVRFWDKLDNLFGTISFGDNDLN 216 (764)
Q Consensus 138 ~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~-iV~Fry~P~~~~~~~~~~~~~~~~~d~~n 216 (764)
....+..+|.. +.+.+.++.++..+.++++.+.|++. ++++.. |+-+ .+.|++.... ..+ .
T Consensus 270 ~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~g~~~~~~~~~~~-------------~~~--~ 331 (411)
T 2o0r_A 270 FQPAVALALDT-EDAWVAALRNSLRARRDRLAAGLTEI-GFAVHD-SYGTYFLCADPRPLG-------------YDD--S 331 (411)
T ss_dssp HHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHH-TCEECC-CCBSSEEEEECGGGT-------------CCC--H
T ss_pred HHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHc-CCEecC-CCeeEEEEEecCCCC-------------CCC--H
Confidence 22233444443 47778888999999999999999987 888754 4444 5666653100 011 2
Q ss_pred HHHHHHHH-hcCcEEEEecee---C----------CeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 217 KAVYDRII-ARKVIYIVKGSF---Q----------DRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 217 ~~L~~~L~-~~G~~~vs~t~l---~----------g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
.++.++|. +.|..+...... . +..++|+++.+ ++++++.+++.|+++.+
T Consensus 332 ~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~---~~e~i~~~~~~l~~~~~ 394 (411)
T 2o0r_A 332 TEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCK---RDDTLDEAIRRLSVLAE 394 (411)
T ss_dssp HHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCS---CHHHHHHHHHHHGGGGC
T ss_pred HHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecC---CHHHHHHHHHHHHHHHh
Confidence 46777776 568765543322 1 35689999864 68899999999877543
No 344
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=97.85 E-value=7.3e-05 Score=81.12 Aligned_cols=223 Identities=11% Similarity=0.044 Sum_probs=130.7
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC--CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD--SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS---- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~--~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~---- 90 (764)
.|.++..++..+|... +.||+++ ++.+|+++|+++ ++-+++-+.++.++|.+=| +.++++
T Consensus 124 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~d~~~l~~~--------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~ 192 (391)
T 3h14_A 124 GYPSYRQILRALGLVP---VDLPTAPENRLQPVPADFAGL--------DLAGLMVASPANPTGTMLDHAAMGALIEAAQA 192 (391)
T ss_dssp CCHHHHHHHHHTTCEE---EEEECCGGGTTSCCHHHHTTS--------CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHcCCEE---EEeecCcccCCCCCHHHHHhc--------CCeEEEECCCCCCCCccCCHHHHHHHHHHHHH
Confidence 4667888999999877 9999985 458899999886 1235555577889999877 555554
Q ss_pred -CCCceeccccccc-cc----e--------eeeecCCCccc-cccccccccCCc---------ccCCCCcccHHHHHHHH
Q psy13453 91 -NGPLKVGGVLRRV-YS----S--------CLVPRGQKSLR-TTVLFHFLFQHW---------QIPLGRRFRALKLWMTL 146 (764)
Q Consensus 91 -~~wlHVDa~l~~~-y~----s--------~ll~rd~~~l~-~~~s~~~d~~d~---------tle~SRr~~ALklWatL 146 (764)
++++++|...... +. + +++..-.+.+- .-+...+-..+. .-..+-....+..++++
T Consensus 193 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 272 (391)
T 3h14_A 193 QGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPEDQVRVVERIAQNMFICAPHASQVAAL 272 (391)
T ss_dssp TTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCGGGHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred cCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHH
Confidence 8999999864211 10 0 11111111110 000000000000 00001122233333332
Q ss_pred HHc-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEE-EeeccccccccccccCccCCccHHHHHHHHHHH
Q psy13453 147 RSY-GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCF-RLKVRFWDKLDNLFGTISFGDNDLNKAVYDRII 224 (764)
Q Consensus 147 ~~l-G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~F-ry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~ 224 (764)
..+ +.+.+.++.++..+..+++.+.|++. ++..+..|+-+...| ++... ..+ ..++.++|.
T Consensus 273 ~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~--------------~~~--~~~~~~~l~ 335 (391)
T 3h14_A 273 AALDCDAELQANLDVYKANRKLMLERLPKA-GFTRIAPPDGAFYVYADVSDL--------------TDD--SRAFAAEIL 335 (391)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCBCCCCBTTEEEEECTTT--------------CSC--HHHHHHHHH
T ss_pred HHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCCcccCCCeeEEEEEecCcc--------------CCC--HHHHHHHHH
Confidence 222 67888899999999999999999987 455555666544443 33210 011 246777777
Q ss_pred hc-CcEEEEecee---CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHcc
Q psy13453 225 AR-KVIYIVKGSF---QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLRG 273 (764)
Q Consensus 225 ~~-G~~~vs~t~l---~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~~ 273 (764)
++ |..+...... .+..++|+++.. ++++++++++.|+++.++....
T Consensus 336 ~~~gi~v~~g~~~~~~~~~~~iRis~~~---~~~~i~~~l~~l~~~~~~~~~~ 385 (391)
T 3h14_A 336 EKAGVAVTPGLDFDPERGAGTLRFSYAR---ATADIEEGLDRLEAFMQARGEG 385 (391)
T ss_dssp HHHCEECEEGGGTCTTTGGGEEEEECCS---CHHHHHHHHHHHHHHHHHC---
T ss_pred HHCCEEEcCchhhCCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHHHhccc
Confidence 65 8765543333 236799998776 6799999999999887664433
No 345
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=97.85 E-value=0.00037 Score=76.14 Aligned_cols=215 Identities=12% Similarity=-0.003 Sum_probs=129.3
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
.|.|...++.+.|... +.++. +|+++|+++|++.. +-+++...+..++|.+.|++++.+ ++|+
T Consensus 152 ~~~~~~~~~~~~g~~~---~~~~~-----~d~~~le~~l~~~~----~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~l 219 (409)
T 3kki_A 152 AHMSLWEGARYANAQA---HPFMH-----NNCDHLRMLIQRHG----PGIIVVDSIYSTLGTIAPLAELVNISKEFGCAL 219 (409)
T ss_dssp SCHHHHHHHHHTTCEE---EEECT-----TCHHHHHHHHHHHC----SCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEE
T ss_pred cCHHHHHHHHHcCCeE---EEecC-----CCHHHHHHHHHhcC----CeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEE
Confidence 5778899999988765 55554 68999999998742 224566777888999999999887 8999
Q ss_pred eeccccccc-c---c-eeee----ecCCC----cccccccc-------ccccC--------CcccCCCCc-ccHHHHHHH
Q psy13453 95 KVGGVLRRV-Y---S-SCLV----PRGQK----SLRTTVLF-------HFLFQ--------HWQIPLGRR-FRALKLWMT 145 (764)
Q Consensus 95 HVDa~l~~~-y---~-s~ll----~rd~~----~l~~~~s~-------~~d~~--------d~tle~SRr-~~ALklWat 145 (764)
++|.+.... + + +... ..+.+ ++...+.. ..+.. .++..++-. ..+..+.++
T Consensus 220 i~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aa 299 (409)
T 3kki_A 220 LVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRAGAIWCNNEVNRCVPFISYPAIFSSTLLPYEAAGLETT 299 (409)
T ss_dssp EEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSCEEEEESSSGGGTHHHHCHHHHHSBCCCHHHHHHHHHH
T ss_pred EEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCceEEEECHHHHHHHHHhCcCccccCCCcHHHHHHHHHH
Confidence 999864211 1 0 0000 00000 00111100 00000 011111111 111233444
Q ss_pred HHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHh
Q psy13453 146 LRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIA 225 (764)
Q Consensus 146 L~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~ 225 (764)
+..+-. ..++.++..++++++.+.|++. ++++. +...++.++... ..-..++.++|.+
T Consensus 300 l~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~-----------------~~~~~~~~~~L~~ 357 (409)
T 3kki_A 300 LEIIES--ADNRRQHLDRMARKLRIGLSQL-GLTIR--SESQIIGLETGD-----------------ERNTEKVRDYLES 357 (409)
T ss_dssp HHHHHH--CHHHHHHHHHHHHHHHHHHHTT-TCCCC--CSSSEEEEEEES-----------------HHHHHHHHHHHHH
T ss_pred HHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCccC--CCCCEEEEEeCC-----------------HHHHHHHHHHHHH
Confidence 444322 2567777888999999999987 67765 355666666531 1123568888999
Q ss_pred cCcEEEEec---eeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 226 RKVIYIVKG---SFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 226 ~G~~~vs~t---~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
+|.+..... .-.+..++|+++.. .+++++++++++.|+++.+.
T Consensus 358 ~Gv~v~~~~~~~~~~~~~~iRi~~~~-~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 358 NGVFGSVFCRPATSKNKNIIRLSLNS-DVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp TTEECEEECTTSSCTTCEEEEEECCT-TCCHHHHHHHHHHHHHHHHH
T ss_pred CCceEeeeCCCCcCCCCcEEEEEccC-CCCHHHHHHHHHHHHHHHhc
Confidence 987543221 12356799997654 56789999999999887653
No 346
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=97.83 E-value=2.1e-05 Score=88.05 Aligned_cols=207 Identities=8% Similarity=-0.009 Sum_probs=122.1
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecC--CCC----CcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc---
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGL--PDS----EWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS--- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpv--d~~----~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~--- 90 (764)
.|.|+.+++.+.|... +.||+ +++ +.+|+++| +.. ++-+++.+. .+++|.+.|++++++
T Consensus 105 ~h~s~~~~~~~~G~~~---~~v~~~~~~~~~~~~~~d~~~l---~~~-----~~~~v~~~~-~n~~G~~~~l~~I~~l~~ 172 (446)
T 2x3l_A 105 VHKSVLHALDISQQEG---HFIETHQSPLTNHYNKVNLSRL---NND-----GHKLVVLTY-PNYYGETFNVEEVIKSLH 172 (446)
T ss_dssp CCHHHHHHHHHHTCCE---EECEEEECTTTSSEEEEEC---------------CCEEEEES-SCTTSCCCCHHHHHHHHH
T ss_pred ccHHHHHHHHHcCCeE---EEEeCeeccccCcCCCCCHHHH---cCC-----CceEEEEEC-CCCCeEecCHHHHHHHHH
Confidence 6899999999999887 88988 665 78999988 322 223445555 455999999999886
Q ss_pred --CCCceecccccc-c-cc-----------eeeeecCCCccccccccc-----cccCC--------ccc-CCCCcccH-H
Q psy13453 91 --NGPLKVGGVLRR-V-YS-----------SCLVPRGQKSLRTTVLFH-----FLFQH--------WQI-PLGRRFRA-L 140 (764)
Q Consensus 91 --~~wlHVDa~l~~-~-y~-----------s~ll~rd~~~l~~~~s~~-----~d~~d--------~tl-e~SRr~~A-L 140 (764)
++|+|+|++... . |. .++...-.+.+..-.... -+..+ ... .+|....+ .
T Consensus 173 ~~~~~livDea~~~~~~f~~~~~~~~~~g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~a 252 (446)
T 2x3l_A 173 QLNIPVLIDEAHGAHFGLQGFPDSTLNYQADYVVQSFHKTLPALTMGSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMA 252 (446)
T ss_dssp HTTCCEEEECTTCTTTTSTTSCCCGGGGTCSEEEECHHHHSSSCTTCEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHH
T ss_pred hcCCeEEEcchhhhhhccCCCCCChHHcCCCEEEECCccccccccccEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHH
Confidence 899999997432 0 10 011110001000000000 00100 011 12222222 3
Q ss_pred HHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHH
Q psy13453 141 KLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVY 220 (764)
Q Consensus 141 klWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~ 220 (764)
.++++++++...|..++.++..++++++.+. +++++.+.+-+.+.|+.. +.+ ..++.
T Consensus 253 al~~a~~~l~~~g~~~~~~~~~~l~~~l~~~-----g~~~~~~~~~~~l~i~~~----------------~~~--~~~l~ 309 (446)
T 2x3l_A 253 SLESAAQFYKTYDSTLFFAKRAQLIECLENK-----GFEMLQVDDPLKLLIKYE----------------GFT--GHDIQ 309 (446)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-----TCEEEECSSTTEEEEECT----------------TSC--HHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc-----CCEECcCCCCeEEEEEeC----------------CcC--HHHHH
Confidence 5566777776667667888888889888887 788876443334666542 111 14678
Q ss_pred HHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 221 DRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 221 ~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
+.|.++|+... ..+..++|+++. +.++++++ .+++.|+++.
T Consensus 310 ~~L~~~GI~v~----~~g~~~iRi~~~-~~~t~e~i-~l~~aL~~~~ 350 (446)
T 2x3l_A 310 NWFMNAHIYLE----LADDYQALAILP-LWHHDDTY-LFDSLLRKIE 350 (446)
T ss_dssp HHHHHTTEEES----EECSSCEEEECC-CCCTTCCC-CHHHHHHHHH
T ss_pred HHHHHCCCEEE----ecCCCEEEEEee-cCCCHHHH-HHHHHHHHHH
Confidence 88888887542 124467999765 44467788 9999888775
No 347
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=97.81 E-value=2.6e-05 Score=84.27 Aligned_cols=211 Identities=10% Similarity=0.067 Sum_probs=130.1
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCC-CcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDS-EWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~-~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
.|.++..++..+|... +.+|++++ +.+|+++|+++|+++ +-+|- ++.++|...|++++.+ +++
T Consensus 84 ~~~~~~~~~~~~G~~~---~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~--~~~~~G~~~~~~~i~~la~~~~~~ 152 (367)
T 3nyt_A 84 TYVATAETVALLGAKP---VYVDIDPRTYNLDPQLLEAAITPR------TKAII--PVSLYGQCADFDAINAIASKYGIP 152 (367)
T ss_dssp SCTHHHHHHHHTTCEE---EEECBCTTTCSBCGGGTGGGCCTT------EEEEC--CBCGGGCCCCHHHHHHHHHHTTCC
T ss_pred ccHHHHHHHHHcCCEE---EEEecCCccCCcCHHHHHHhcCcC------CcEEE--eeCCccChhhHHHHHHHHHHcCCE
Confidence 5788999999999877 99999864 899999999998542 22322 6678999999999876 899
Q ss_pred ceeccccc--ccc-----c---eeeeec--CCCcccc----ccccc--c----------------ccCCcccCCCCcccH
Q psy13453 94 LKVGGVLR--RVY-----S---SCLVPR--GQKSLRT----TVLFH--F----------------LFQHWQIPLGRRFRA 139 (764)
Q Consensus 94 lHVDa~l~--~~y-----~---s~ll~r--d~~~l~~----~~s~~--~----------------d~~d~tle~SRr~~A 139 (764)
+++|++.. ..+ + -++.+. ..+.+.. .+-.. . .|....+..+-+...
T Consensus 153 li~D~a~~~g~~~~~~~~~~~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~ 232 (367)
T 3nyt_A 153 VIEDAAQSFGASYKGKRSCNLSTVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDT 232 (367)
T ss_dssp BEEECTTTTTCEETTEETTSSSSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCH
T ss_pred EEEECccccCCeECCeeccCCCCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccH
Confidence 99999631 111 0 111111 0111111 00000 0 000011122335666
Q ss_pred HHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCc-----eeEEEEeeccccccccccccCccCCccH
Q psy13453 140 LKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSM-----GLVCFRLKVRFWDKLDNLFGTISFGDND 214 (764)
Q Consensus 140 LklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l-----~iV~Fry~P~~~~~~~~~~~~~~~~~d~ 214 (764)
+..++.+..+ +.+.+.+++..++++++.+.|++. ++++...+.- .++.++.. +
T Consensus 233 ~~aa~~~~~l--~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~----------------~--- 290 (367)
T 3nyt_A 233 LQAAILLPKL--EIFEEEIALRQKVAAEYDLSLKQV-GIGTPFIEVNNISVYAQYTVRMD----------------N--- 290 (367)
T ss_dssp HHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTEECCCSSEEEECS----------------S---
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccC-CeeccCCCCCCceeeEEEEEEeC----------------C---
Confidence 7666666554 456788889999999999999987 4555433322 12223211 1
Q ss_pred HHHHHHHHHHhcCcEEEEec--eeC------------------CeeEEEEeccCCCCCHHHHHHHHHHHHH
Q psy13453 215 LNKAVYDRIIARKVIYIVKG--SFQ------------------DRLFMRFAICSSQTEESDVQLGWNEIRT 265 (764)
Q Consensus 215 ~n~~L~~~L~~~G~~~vs~t--~l~------------------g~~~LRi~v~np~Tt~e~i~~~l~~l~~ 265 (764)
...+.++|.++|...-... .++ ....||+ -+++.+++++++.+++.|++
T Consensus 291 -~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l-p~~~~~t~~~i~~v~~~~~~ 359 (367)
T 3nyt_A 291 -RESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSL-PMHPYLDTASIKIICAALTN 359 (367)
T ss_dssp -HHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEE-CCCTTCCHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEc-cCCCCCCHHHHHHHHHHHHH
Confidence 2467788888886321111 110 1357887 57889999999999888765
No 348
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=97.79 E-value=0.00029 Score=76.76 Aligned_cols=209 Identities=10% Similarity=0.027 Sum_probs=122.5
Q ss_pred EEecCC-CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceecccccc-------cc-
Q psy13453 39 RLSGLP-DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGGVLRR-------VY- 104 (764)
Q Consensus 39 ~~Vpvd-~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa~l~~-------~y- 104 (764)
+.+|++ +++.+|+++|+++|++.. +-+++.+.+ ..|...+++++++ ++++++|.+... ..
T Consensus 148 ~~~~~~~~~~~~d~~~l~~~i~~~~----~~~v~~~~~--~~~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~ 221 (425)
T 3ecd_A 148 LQYGVSRDTMLIDYDQVEALAQQHK----PSLIIAGFS--AYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHAN 221 (425)
T ss_dssp EEECCCTTTSSCCHHHHHHHHHHHC----CSEEEEECS--CCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCC
T ss_pred eecCCCcccCccCHHHHHHHHhhcC----CcEEEEccc--cCCCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccC
Confidence 455665 458999999999998531 123433323 3478899988876 899999997210 00
Q ss_pred ----ceeeeecCCCcccc---cccccc--c-------cCCcccCCCC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Q psy13453 105 ----SSCLVPRGQKSLRT---TVLFHF--L-------FQHWQIPLGR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKK 167 (764)
Q Consensus 105 ----~s~ll~rd~~~l~~---~~s~~~--d-------~~d~tle~SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~ 167 (764)
..+++..-.+.+.. .+-... + ....+..++- ......+++++..+..+++.++.++..+++++
T Consensus 222 ~~~~~di~~~s~sK~l~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~ 301 (425)
T 3ecd_A 222 PVEHAHVVTSTTHKTLRGPRGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQA 301 (425)
T ss_dssp GGGTCSEEEEESSGGGCCCSCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHH
T ss_pred chhcCcEEEecCCcccCCCCcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 01111111122210 000000 0 0011111222 22334556677777778899999999999999
Q ss_pred HHHHHhcCCCeEEeCC-CCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEec-e-----eCCee
Q psy13453 168 FADLVEQDDRFELVCP-PSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKG-S-----FQDRL 240 (764)
Q Consensus 168 l~~~I~~~p~~ell~~-P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t-~-----l~g~~ 240 (764)
+.+.|++ .+++++.+ +..+++.+.+.+.+ .+ ...+.+.|.+.|..+.... . .....
T Consensus 302 l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~--------------~~--~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~ 364 (425)
T 3ecd_A 302 LGDVLKA-GGVDLVTGGTDNHLLLVDLRPKG--------------LK--GAQVEQALERAGITCNKNGIPFDPEKPTITS 364 (425)
T ss_dssp HHHHHHH-TTCEEGGGSCSSSEEEEECGGGT--------------CC--HHHHHHHHHHTTEECEECCCTTCSSCTTTCS
T ss_pred HHHHHHh-CCCeeccCCCCceEEEEEeCCCC--------------CC--HHHHHHHHHHcCCEecccccCCCCCCCCCcc
Confidence 9999998 58888764 35556666553211 11 2467777888887554221 1 11234
Q ss_pred EEEEecc---CCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 241 FMRFAIC---SSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 241 ~LRi~v~---np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
.+|++.. ....++++++.+++.|+++.++.
T Consensus 365 ~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 365 GIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp EEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 7999743 23346899999999998887664
No 349
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=97.79 E-value=0.00018 Score=78.05 Aligned_cols=223 Identities=14% Similarity=0.095 Sum_probs=132.3
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC---CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc---
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD---SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS--- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~---~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~--- 90 (764)
.|.++..++..+|... +.||++. ++.+|+++|+++|++. ++-+++-+.++.++|.+=| ++++++
T Consensus 120 ~y~~~~~~~~~~g~~~---~~v~~~~~~~~~~~d~~~l~~~l~~~----~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~ 192 (390)
T 1d2f_A 120 AYDAFYKAIEGNQRTV---MPVALEKQADGWFCDMGKLEAVLAKP----ECKIMLLCSPQNPTGKVWTCDELEIMADLCE 192 (390)
T ss_dssp CCHHHHHHHHHTTCEE---EEEECEECSSSEECCHHHHHHHHTST----TEEEEEEESSCTTTCCCCCTTHHHHHHHHHH
T ss_pred CcHHHHHHHHHCCCEE---EEeecccCCCccccCHHHHHHHhccC----CCeEEEEeCCCCCCCcCcCHHHHHHHHHHHH
Confidence 4567888899999866 8899974 3479999999999641 1123444678999999866 555554
Q ss_pred --CCCceeccccccc-cc-----eee-eecC----CCccccccc-----cccccC-Cc--------ccC-C-C-CcccHH
Q psy13453 91 --NGPLKVGGVLRRV-YS-----SCL-VPRG----QKSLRTTVL-----FHFLFQ-HW--------QIP-L-G-RRFRAL 140 (764)
Q Consensus 91 --~~wlHVDa~l~~~-y~-----s~l-l~rd----~~~l~~~~s-----~~~d~~-d~--------tle-~-S-Rr~~AL 140 (764)
++++++|...... +. ++. +..+ -.++...+. ..+-+. +. ... . + -....+
T Consensus 193 ~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (390)
T 1d2f_A 193 RHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVL 272 (390)
T ss_dssp HTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEEEECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHH
T ss_pred HcCCEEEEEccccccccCCCCCcCHHHcchhhHhhccCccHhhcccChhheEEEECCHHHHHHHHHHHhhhcccCCCCHH
Confidence 8899999964221 10 100 0000 001111111 000000 00 000 0 0 022344
Q ss_pred HHHHHHHHc--cHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEeCCCCceeEE-EEeeccccccccccccCccCCccHHH
Q psy13453 141 KLWMTLRSY--GLKGLQAYLRKHISLAKKFADLVEQ-DDRFELVCPPSMGLVC-FRLKVRFWDKLDNLFGTISFGDNDLN 216 (764)
Q Consensus 141 klWatL~~l--G~eGy~~~i~~~i~lA~~l~~~I~~-~p~~ell~~P~l~iV~-Fry~P~~~~~~~~~~~~~~~~~d~~n 216 (764)
..+++...+ +.+.+.++.++..+..+++.+.|++ .|+++++ .|+-+.+. +++... +.+ .
T Consensus 273 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~--------------~~~--~ 335 (390)
T 1d2f_A 273 ALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQ-IPQSTYLAWLDLRPL--------------NID--D 335 (390)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCC-CCSBCSEEEEECGGG--------------CCC--H
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEe-cCCccEEEEEEcccc--------------CCC--H
Confidence 444443333 4667788888888999999999998 7888764 45555554 444210 011 2
Q ss_pred HHHHHHHH-hcCcEEEEeceeC--CeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 217 KAVYDRII-ARKVIYIVKGSFQ--DRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 217 ~~L~~~L~-~~G~~~vs~t~l~--g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
.++.++|. +.|..+....... +..++|+++.. +++++++.++.+.++.++
T Consensus 336 ~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~---~~~~l~~~l~~l~~~l~~ 388 (390)
T 1d2f_A 336 NALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC---PRSKLEKGVAGLINAIRA 388 (390)
T ss_dssp HHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS---CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHHh
Confidence 46888888 5787655443332 34689998876 368899999888887654
No 350
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=97.77 E-value=7.8e-05 Score=81.02 Aligned_cols=217 Identities=11% Similarity=0.015 Sum_probs=127.1
Q ss_pred eeeHHHHHhhcCCCCCCeEEecCCC--CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc---cCchhhhc-----
Q psy13453 21 IYESFKATHSLSGTPDQVRLSGLPD--SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI---QSLNAPVS----- 90 (764)
Q Consensus 21 ~YSv~KAa~~LGl~~~~v~~Vpvd~--~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i---Dpi~~ia~----- 90 (764)
|.++..+++..|... +.||+++ ++.+|+++|+++|++. +-+++-+-++.++|.+ +++.++++
T Consensus 125 y~~~~~~~~~~g~~~---~~v~~~~~~~~~~d~~~l~~~l~~~-----~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~ 196 (385)
T 1b5p_A 125 WVSYPEMVRFAGGVV---VEVETLPEEGFVPDPERVRRAITPR-----TKALVVNSPNNPTGAVYPKEVLEALARLAVEH 196 (385)
T ss_dssp CTHHHHHHHHTTCEE---EEEECCGGGTTCCCHHHHHTTCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT
T ss_pred chhHHHHHHHcCCEE---EEeecCcccCCCCCHHHHHHhcCCC-----CEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHc
Confidence 456777888889876 9999984 6789999999988642 2244455688899997 44666664
Q ss_pred CCCceeccccccc-c----cee--------e-eecCCCccc-cccccccccCC---------cccCCCCcccHHHHHHHH
Q psy13453 91 NGPLKVGGVLRRV-Y----SSC--------L-VPRGQKSLR-TTVLFHFLFQH---------WQIPLGRRFRALKLWMTL 146 (764)
Q Consensus 91 ~~wlHVDa~l~~~-y----~s~--------l-l~rd~~~l~-~~~s~~~d~~d---------~tle~SRr~~ALklWatL 146 (764)
++++++|...... | .++ + +..-.+.+- ..+...+-+.+ ..-.++-....+..+++.
T Consensus 197 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~ 276 (385)
T 1b5p_A 197 DFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATL 276 (385)
T ss_dssp TCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHH
T ss_pred CCEEEEEccchhcccCCCCCCHHHcCCCCEEEEEechhhcCCcccceEEEEeCHHHHHHHHHHHhhccCCCCHHHHHHHH
Confidence 7899999864221 1 011 0 000011100 00000000000 000111233445555554
Q ss_pred HHc-----cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEE-EeeccccccccccccCccCCccHHHHHHH
Q psy13453 147 RSY-----GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCF-RLKVRFWDKLDNLFGTISFGDNDLNKAVY 220 (764)
Q Consensus 147 ~~l-----G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~F-ry~P~~~~~~~~~~~~~~~~~d~~n~~L~ 220 (764)
..+ |.+.+.++.++..+..+++.+.+++. ++++. .|+-+...| +. +. .+.+ ..++.
T Consensus 277 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~-~~-------------~~~~--~~~l~ 338 (385)
T 1b5p_A 277 EALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAV-RPSGAFYVLMDT-SP-------------IAPD--EVRAA 338 (385)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCSBTTEEEEEC-TT-------------TCSS--HHHHH
T ss_pred HHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCCeeEEEEEec-CC-------------CCCC--HHHHH
Confidence 444 45556777788888889999999887 77754 444333233 22 10 0111 24678
Q ss_pred HHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 221 DRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 221 ~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
++|.+.|..+..........++|+++. ++++++++.++.|.++
T Consensus 339 ~~l~~~gv~v~~g~~f~~~~~iRis~~---~~~~~i~~~l~~l~~~ 381 (385)
T 1b5p_A 339 ERLLEAGVAVVPGTDFAAFGHVRLSYA---TSEENLRKALERFARV 381 (385)
T ss_dssp HHHHHTTEECEESGGGTCTTEEEEECC---SCHHHHHHHHHHGGGG
T ss_pred HHHHHCCeEEecccccCCCCeEEEEec---CCHHHHHHHHHHHHHH
Confidence 888888876654443322458999976 6788888888877654
No 351
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=97.73 E-value=0.00016 Score=79.62 Aligned_cols=207 Identities=9% Similarity=0.024 Sum_probs=123.2
Q ss_pred eeeHHHH----HhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----C
Q psy13453 21 IYESFKA----THSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----N 91 (764)
Q Consensus 21 ~YSv~KA----a~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~ 91 (764)
|.|+..+ +...|+.. +.+|+| +++|+++|+++ +-+++.+.++.++|.+.|++++++ +
T Consensus 105 ~~~~~~~~~~~~~~~g~~~---~~~~~~------~~~l~~~i~~~-----~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~ 170 (412)
T 2cb1_A 105 FGQTIGLFGQVLSLMGVTV---RYVDPE------PEAVREALSAK-----TRAVFVETVANPALLVPDLEALATLAEEAG 170 (412)
T ss_dssp CHHHHHHHHHTTTTTTCEE---EEECSS------HHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHT
T ss_pred chhHHHHHHHHHHHcCCEE---EEECCC------HHHHHHHhccC-----CeEEEEeCCCCCCcccccHHHHHHHHHHcC
Confidence 4455544 44566655 777764 88999888653 224457888999999999999886 8
Q ss_pred CCceecccccc--------------------c-cc------eeeeecCCCc-cc--ccccc---------------c-c-
Q psy13453 92 GPLKVGGVLRR--------------------V-YS------SCLVPRGQKS-LR--TTVLF---------------H-F- 124 (764)
Q Consensus 92 ~wlHVDa~l~~--------------------~-y~------s~ll~rd~~~-l~--~~~s~---------------~-~- 124 (764)
+|+|+|++... + ++ ++++..++.. .. ..+.. . +
T Consensus 171 ~~li~D~~~~~~~~~~~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 250 (412)
T 2cb1_A 171 VALVVDNTFGAAGALCRPLAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPE 250 (412)
T ss_dssp CEEEEECGGGTTTTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHH
T ss_pred CEEEEECCCccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHH
Confidence 99999995311 1 00 2233322110 00 00000 0 0
Q ss_pred ccCCcccC-CCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC-----------------Cc
Q psy13453 125 LFQHWQIP-LGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP-----------------SM 186 (764)
Q Consensus 125 d~~d~tle-~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P-----------------~l 186 (764)
.+..+++. .+-...++..|+.+..+ +.+.+++++..++++++.+.|+++++++++..| .-
T Consensus 251 ~~r~~~~~~~g~~~~~~~a~~~~~~l--~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~ 328 (412)
T 2cb1_A 251 RVRTLGLSLCGMALSPFNAYLLFQGL--ETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGG 328 (412)
T ss_dssp HHHHHHTTTTCCCCCHHHHHHHHHHG--GGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSC
T ss_pred HHHHHHHHhcCCCCChHHhHHHHcCC--chHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCc
Confidence 01111111 12244566667766543 556788888899999999999999999866433 24
Q ss_pred eeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEec----------e-------eC-------C--ee
Q psy13453 187 GLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKG----------S-------FQ-------D--RL 240 (764)
Q Consensus 187 ~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t----------~-------l~-------g--~~ 240 (764)
++++|++ .+ ...+.+.|.+.|.+. ..+ . +. | ..
T Consensus 329 ~iv~~~~-~~-------------------~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~ 387 (412)
T 2cb1_A 329 PILTLDL-GD-------------------LERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPG 387 (412)
T ss_dssp SEEEEEC-SS-------------------HHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTT
T ss_pred eEEEEEe-CC-------------------HHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCC
Confidence 5888876 21 124455555667654 321 0 00 1 46
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHH
Q psy13453 241 FMRFAICSSQTEESDVQLGWNEIRT 265 (764)
Q Consensus 241 ~LRi~v~np~Tt~e~i~~~l~~l~~ 265 (764)
.+|+++.-- +++++++.+.+.|++
T Consensus 388 ~iR~s~g~~-~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 388 LVRVSVGLE-DPLDLLALFEEALEA 411 (412)
T ss_dssp EEEEECCSS-CHHHHHHHHHHHHHC
T ss_pred eEEEEeccC-CHHHHHHHHHHHHhh
Confidence 899976554 458888888887753
No 352
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=97.71 E-value=9.7e-05 Score=82.56 Aligned_cols=145 Identities=14% Similarity=0.135 Sum_probs=92.7
Q ss_pred HHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceeccccc
Q psy13453 27 ATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGGVLR 101 (764)
Q Consensus 27 Aa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa~l~ 101 (764)
.+..+|+.. +.||.+ |+++|+++|+++ +-+++...++.++|.+.|++++++ +++++||....
T Consensus 141 ~~~~~G~~~---~~v~~~-----d~~~l~~ai~~~-----t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~ 207 (430)
T 3ri6_A 141 TLPSFGIEV---RFVDVM-----DSLAVEHACDET-----TKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMT 207 (430)
T ss_dssp HHHHTTCEE---EEECTT-----CHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTS
T ss_pred HHHHcCCEE---EEeCCC-----CHHHHHHhhCCC-----CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCc
Confidence 777888876 888877 899999999753 224457788999999999999886 89999998532
Q ss_pred ccc---------------------------ceeeeecCCCcccc--cccc------c---cc--cCCcccCCCCcccHHH
Q psy13453 102 RVY---------------------------SSCLVPRGQKSLRT--TVLF------H---FL--FQHWQIPLGRRFRALK 141 (764)
Q Consensus 102 ~~y---------------------------~s~ll~rd~~~l~~--~~s~------~---~d--~~d~tle~SRr~~ALk 141 (764)
.++ +++++.+....... .+.. . .. ...+....+-....+.
T Consensus 208 ~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~ 287 (430)
T 3ri6_A 208 PPYLLEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHN 287 (430)
T ss_dssp CTTTCCGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHH
T ss_pred ccccCChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHH
Confidence 111 11222111111000 0000 0 00 0000001122234556
Q ss_pred HHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCc
Q psy13453 142 LWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSM 186 (764)
Q Consensus 142 lWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l 186 (764)
.|+.++ |.+.+..++++..++|+++++.|+++|.++-+.-|.+
T Consensus 288 a~l~l~--~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l 330 (430)
T 3ri6_A 288 AYLQSL--GLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSL 330 (430)
T ss_dssp HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTS
T ss_pred HHHHHh--hhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCC
Confidence 676655 7788999999999999999999999999987776663
No 353
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=97.71 E-value=0.00015 Score=77.37 Aligned_cols=98 Identities=8% Similarity=0.064 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEe-CCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEE
Q psy13453 154 LQAYLRKHISLAKKFADLVEQDDRFELV-CPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIV 232 (764)
Q Consensus 154 y~~~i~~~i~lA~~l~~~I~~~p~~ell-~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs 232 (764)
+.+.+++..+.++++.+.|++++++++. .++..+.+.+++... ...-..++.+.|.++|.++..
T Consensus 254 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~l~~~Gi~v~~ 318 (357)
T 3lws_A 254 RKDRMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQ---------------AADISPKLEQVQEETGLGFVG 318 (357)
T ss_dssp HTTCHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESC---------------HHHHHHHHHHHHHHHCEESCS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCC---------------hHHHHHHHHHHHHhcCeEEec
Confidence 5566677788999999999999999985 677788887776421 011135778888888875432
Q ss_pred ece-eCCeeEEEEeccCCC--CCHHHHHHHHHHHHHH
Q psy13453 233 KGS-FQDRLFMRFAICSSQ--TEESDVQLGWNEIRTA 266 (764)
Q Consensus 233 ~t~-l~g~~~LRi~v~np~--Tt~e~i~~~l~~l~~~ 266 (764)
... ..+..++|+++..++ ++++.+++.++.|.++
T Consensus 319 g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~a 355 (357)
T 3lws_A 319 YLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQA 355 (357)
T ss_dssp CCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHH
T ss_pred ccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHHh
Confidence 211 145678999987665 6788888888887654
No 354
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=97.67 E-value=0.00031 Score=77.96 Aligned_cols=226 Identities=8% Similarity=-0.035 Sum_probs=123.7
Q ss_pred eeHHHHHhhcCCCCCCeEEecCCC----------CCcccHHHHHHHHHHHhhCCCCcEEEEeeCC-cccccccC---chh
Q psy13453 22 YESFKATHSLSGTPDQVRLSGLPD----------SEWLAYLTLRTIYESFRKSFLCPMCSGYCGR-TLHQDIQS---LNA 87 (764)
Q Consensus 22 YSv~KAa~~LGl~~~~v~~Vpvd~----------~~rmD~~aLe~~I~~~~~~G~~p~~VatAGT-T~~G~iDp---i~~ 87 (764)
-++..++...|... +.||+++ ++.+|+++|+++|++.+. +...+++-+.++ +++|.+=| +++
T Consensus 124 ~~~~~~~~~~G~~~---~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~-~~~~~v~l~~p~n~ptG~~~~~~~l~~ 199 (456)
T 2ez2_A 124 TTTRYHQEKNGAVF---VDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGA-ENIAYICLAVTVNLAGGQPVSMANMRA 199 (456)
T ss_dssp HHHHHHHHHTTCEE---EECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG-GGEEEEEEESSBTTTTSBCCCHHHHHH
T ss_pred chhHHHHHHcCCEE---EEecccccccccccccccCCCCHHHHHHHHHhccc-cceeEEEEeccCCCCCCccCCHHHHHH
Confidence 34478899999876 8888873 278999999999987531 111233334344 47887644 777
Q ss_pred hhc-----CCCceecccccc-----------ccc---------------eeeeecCCCccc-c--cccc--ccc------
Q psy13453 88 PVS-----NGPLKVGGVLRR-----------VYS---------------SCLVPRGQKSLR-T--TVLF--HFL------ 125 (764)
Q Consensus 88 ia~-----~~wlHVDa~l~~-----------~y~---------------s~ll~rd~~~l~-~--~~s~--~~d------ 125 (764)
+++ ++|+++|.+... .|. -++.+.-++..- . .+-. ..+
T Consensus 200 i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~~~gG~~~~~~~~~~~~~~ 279 (456)
T 2ez2_A 200 VRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDDEMFSSAK 279 (456)
T ss_dssp HHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCSSCEEEEESCHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCcccCCCCceeEEEECCHHHHHHHH
Confidence 665 899999996321 111 111111111100 0 0000 000
Q ss_pred -c----CCcccCCCCcccHH-H-HHHHHHHccHHHH-HHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeec--
Q psy13453 126 -F----QHWQIPLGRRFRAL-K-LWMTLRSYGLKGL-QAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKV-- 195 (764)
Q Consensus 126 -~----~d~tle~SRr~~AL-k-lWatL~~lG~eGy-~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P-- 195 (764)
+ ..+.-.++-....+ . ..+.+ +.+ .+.+++..++++++.+.|++. +++++.+.....+.++...
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~a~a~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~~~~~~~~~~~~~~ 353 (456)
T 2ez2_A 280 ELVVVYEGMPSYGGLAGRDMEAMAIGLR-----EAMQYEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFC 353 (456)
T ss_dssp HHHHHHTCCTTTTTCCHHHHHHHHHHHH-----HHTCHHHHHHHHHHHHHHHHHHHHT-TCCBCSSCCSSEEEEEHHHHT
T ss_pred HHHhhccCcccccCcchhHHHHHHHHHH-----HHhHHHHHHHHHHHHHHHHHHHhcC-CCccccCCCceEEEEEhHHhc
Confidence 0 00000011111111 1 11112 223 456677778888999999884 7776554444444444320
Q ss_pred cccccccccccCccCCccHH-HHHHHHHH-HhcCcEEEEece-------------eCCeeEEEEeccCCCCCHHHHHHHH
Q psy13453 196 RFWDKLDNLFGTISFGDNDL-NKAVYDRI-IARKVIYIVKGS-------------FQDRLFMRFAICSSQTEESDVQLGW 260 (764)
Q Consensus 196 ~~~~~~~~~~~~~~~~~d~~-n~~L~~~L-~~~G~~~vs~t~-------------l~g~~~LRi~v~np~Tt~e~i~~~l 260 (764)
++. +.+++ ...+.++| .+.|...+.... ..+...+|+++....+++++++.++
T Consensus 354 ~~~------------~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~ 421 (456)
T 2ez2_A 354 EHL------------TQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVA 421 (456)
T ss_dssp TTS------------CGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHH
T ss_pred CCC------------ChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHH
Confidence 110 12234 45667777 567775443221 1223679998887658899999999
Q ss_pred HHHHHHHHH
Q psy13453 261 NEIRTATEE 269 (764)
Q Consensus 261 ~~l~~~~~~ 269 (764)
+.|+++.++
T Consensus 422 ~~l~~~l~~ 430 (456)
T 2ez2_A 422 DGIIKLYQH 430 (456)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhh
Confidence 999988654
No 355
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=97.67 E-value=0.00015 Score=79.36 Aligned_cols=149 Identities=11% Similarity=0.031 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
.++.+.+.+|+. ..|++-. .....++|+|+++++..++.+..+ + +...+..|++++-+
T Consensus 71 ~~lr~aia~~~~-~~g~~~~------~~~~i~~t~G~~~al~~~~~~l~~---~------------Gd~~~~~Vlv~~P~ 128 (391)
T 3bwn_A 71 PELEDAIKDLHG-VVGNAAT------EDRYIVVGTGSTQLCQAAVHALSS---L------------ARSQPVSVVAAAPF 128 (391)
T ss_dssp HHHHHHHHHHHH-HHCSBCC------SSSEEEEEEHHHHHHHHHHHHHHH---T------------SSSSSEEEEECSSC
T ss_pred HHHHHHHHHHHH-hcCCCCC------CCCeEEEeCChHHHHHHHHHHhcC---C------------CCCCcceEEEcCCC
Confidence 677777777776 4455321 113688999999998777665421 1 00011257889999
Q ss_pred chhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh-cC--CEE
Q psy13453 641 NSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE-YN--IWL 717 (764)
Q Consensus 641 H~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~-~g--lwL 717 (764)
|.+...+++..|.+++.+++|.++ ++ . ..+-+|+.+..++.||.+-+ +| |++ |+ +|+
T Consensus 129 y~~~~~~~~~~g~~~~~~~~d~~~-l~---------~-----~~~k~v~l~~p~NPtG~~~~--~l---~~~~~~~~~~i 188 (391)
T 3bwn_A 129 YSTYVEETTYVRSGMYKWEGDAWG-FD---------K-----KGPYIELVTSPNNPDGTIRE--TV---VNRPDDDEAKV 188 (391)
T ss_dssp CTHHHHHHHTTCBTTEEEEEESTT-CC---------C-----CSCEEEEEESSCTTTCCCCC--CC---C-----CCCEE
T ss_pred chhHHHHHHHcCCeEEEecCCHHH-cC---------C-----CCCEEEEECCCCCCCchhHH--HH---HHHhhcCCCEE
Confidence 999999999999999999987543 22 0 12446767888999999975 44 444 55 999
Q ss_pred EEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCC
Q psy13453 718 HVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN 757 (764)
Q Consensus 718 HVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P 757 (764)
++|.+|+.. .+. .+......+-+..++||.++.|
T Consensus 189 i~De~y~~~-----~~~-~l~~~~~~~i~~~S~SK~~g~~ 222 (391)
T 3bwn_A 189 IHDFAYYWP-----HYT-PITRRQDHDIMLFTFSKITGHA 222 (391)
T ss_dssp EEECTTCST-----TTS-CCCCCBCCSEEEEEHHHHHSCG
T ss_pred EEeCCCCCC-----CCC-ccccCCCCeEEEEechhhcCCC
Confidence 999999741 111 1111223467888999988744
No 356
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=97.66 E-value=0.00035 Score=75.78 Aligned_cols=217 Identities=9% Similarity=0.019 Sum_probs=124.9
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC-CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchh---hh------
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD-SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNA---PV------ 89 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~-~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~---ia------ 89 (764)
.|.++..++..+|... +.||+++ ++.+|+++|+++|++. +-+++-+.++.++|.+=|.++ ++
T Consensus 133 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~d~~~l~~~l~~~-----~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~ 204 (398)
T 3ele_A 133 YFPEYKVFVNAAGARL---VEVPADTEHFQIDFDALEERINAH-----TRGVIINSPNNPSGTVYSEETIKKLSDLLEKK 204 (398)
T ss_dssp CCTHHHHHHHHTTCEE---EEECCCTTTSSCCHHHHHHTCCTT-----EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHH
T ss_pred CchhhHHHHHHcCCEE---EEEecCCcCCcCCHHHHHHHhCcC-----CCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 4667888999999877 9999985 6799999999998642 224445678999999977444 32
Q ss_pred -----cCCCceeccccccc-cce-------------eeeecCCCccc-cccccccccCCccc----------------CC
Q psy13453 90 -----SNGPLKVGGVLRRV-YSS-------------CLVPRGQKSLR-TTVLFHFLFQHWQI----------------PL 133 (764)
Q Consensus 90 -----~~~wlHVDa~l~~~-y~s-------------~ll~rd~~~l~-~~~s~~~d~~d~tl----------------e~ 133 (764)
.++++++|...... |.+ +++..-.+.+- .-+...+-+....+ .+
T Consensus 205 ~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (398)
T 3ele_A 205 SKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRALG 284 (398)
T ss_dssp HHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHTT
T ss_pred hhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHHHhhhcc
Confidence 25788999864211 100 01100011110 00000000000000 00
Q ss_pred CCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCcee-EEEEeeccccccccccccCccCCc
Q psy13453 134 GRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGL-VCFRLKVRFWDKLDNLFGTISFGD 212 (764)
Q Consensus 134 SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~i-V~Fry~P~~~~~~~~~~~~~~~~~ 212 (764)
.-....+..++....+-... ..++..+..+++.+.|++. ++++.. |+-+. +.++.. ..
T Consensus 285 ~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~----------------~~ 343 (398)
T 3ele_A 285 YVCAPSLFQKMIVKCQGATG---DINAYKENRDLLYEGLTRI-GYHCFK-PDGAFYMFVKAL----------------ED 343 (398)
T ss_dssp CCCSCHHHHHHHTTCTTCCC---CHHHHHHHHHHHHHHHHHH-TCCEEC-CSBSSEEEEECS----------------SS
T ss_pred ccCCCHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHc-CCeecC-CCeeEEEEEEcC----------------CC
Confidence 11112233333322221111 2455566777888888876 677654 44444 444431 11
Q ss_pred cHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 213 NDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 213 d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
+ ..++.+.|.+.|..+..........++|+++. +++++++.+++.|+++.+++
T Consensus 344 ~--~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~e~i~~~l~~l~~~l~~~ 396 (398)
T 3ele_A 344 D--SNAFCEKAKEEDVLIVAADGFGCPGWVRISYC---VDREMIKHSMPAFEKIYKKY 396 (398)
T ss_dssp C--HHHHHHHHHTTTEECEESGGGTCTTEEEEECC---SCHHHHHHHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHCCEEEeCccccCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHh
Confidence 1 24677888888976655544444568999875 58999999999999887664
No 357
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=97.65 E-value=0.00049 Score=74.09 Aligned_cols=216 Identities=17% Similarity=0.094 Sum_probs=126.1
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc-----C
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS-----N 91 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~-----~ 91 (764)
.|.++..+++.+|... +.+|+++.+.+|+++|+++|++.. -+++-+.++.++|.+=| ++++++ +
T Consensus 120 ~y~~~~~~~~~~g~~~---~~~~~~~~~~~d~~~l~~~l~~~~-----~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~ 191 (376)
T 2dou_A 120 AYPSYFGAARVASLRT---FLIPLREDGLADLKAVPEGVWREA-----KVLLLNYPNNPTGAVADWGYFEEALGLARKHG 191 (376)
T ss_dssp CCHHHHHHHHHTTCEE---EEECBCTTSSBCGGGSCHHHHHHE-----EEEEECSSCTTTCCCCCHHHHHHHHHHHHHTT
T ss_pred CcHhHHHHHHHcCCEE---EEeeCCCCCCCCHHHHHHhhccCc-----eEEEECCCCCCcCccCCHHHHHHHHHHHHHcC
Confidence 4567888899999876 889986566899999999997532 24444568889999865 444443 8
Q ss_pred CCceeccccccc-cc----eeeeecC--CC-----ccccccc-----cccccCCc---------ccCCCCcccHHHHHHH
Q psy13453 92 GPLKVGGVLRRV-YS----SCLVPRG--QK-----SLRTTVL-----FHFLFQHW---------QIPLGRRFRALKLWMT 145 (764)
Q Consensus 92 ~wlHVDa~l~~~-y~----s~ll~rd--~~-----~l~~~~s-----~~~d~~d~---------tle~SRr~~ALklWat 145 (764)
+++++|...... +. +++-.-+ .. ++...+. ..+-+.+. ....+-....+..+++
T Consensus 192 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~ 271 (376)
T 2dou_A 192 LWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERVKGVIDFNQYAGVLRMG 271 (376)
T ss_dssp CEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHHHHHHHHHCCCSCHHHHHHH
T ss_pred CEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCHHHHHHHHHHHHhcccCCCHHHHHHH
Confidence 899999864211 11 1000000 00 0000010 00000000 0000011223333333
Q ss_pred HHHc--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCcee-EEEEeeccccccccccccCccCCccHHHHHHHHH
Q psy13453 146 LRSY--GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGL-VCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDR 222 (764)
Q Consensus 146 L~~l--G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~i-V~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~ 222 (764)
...+ +.+.+.++.++..+..+++.+.|++. +++. .|+.+. +.+++. . ..+ ..++.++
T Consensus 272 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~-~~~~~~~~~~~~~-~--------------~~~--~~~~~~~ 331 (376)
T 2dou_A 272 VEALKTPKEVVRGYARVYRERALGMAEALKGV--LSLL-PPRATMYLWGRLP-E--------------GVD--DLEFGLR 331 (376)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--SEEC-CCCBSSEEEEECC-T--------------TCC--HHHHHHH
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--cCcc-CCCeeEEEEEECC-C--------------CCC--HHHHHHH
Confidence 3333 46778888888889999999999987 7765 444443 445542 1 111 2468888
Q ss_pred HHhcCcEEEEeceeC--CeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 223 IIARKVIYIVKGSFQ--DRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 223 L~~~G~~~vs~t~l~--g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
|.++|..+....... +..++|+++.. ++++++.+++.|+++
T Consensus 332 l~~~gi~v~~g~~f~~~~~~~~Ris~~~---~~~~i~~~l~~l~~~ 374 (376)
T 2dou_A 332 LVERGVALAPGRGFGPGGKGFVRIALVR---PLEELLEAAKRIREA 374 (376)
T ss_dssp HHHTTEECEEGGGGCGGGTTEEEEECCS---CHHHHHHHHHHHHHT
T ss_pred HHHCCEEEcCchhhCCCCCCeEEEEecC---CHHHHHHHHHHHHHH
Confidence 888887655433322 34689998764 688999999888764
No 358
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=97.63 E-value=0.00029 Score=77.07 Aligned_cols=233 Identities=11% Similarity=0.041 Sum_probs=132.2
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC------------CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCccccccc---C
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD------------SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQ---S 84 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~------------~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iD---p 84 (764)
.|.++..++...|... +.+|++. ++++|+++|+++++++ +-+++-+.++.++|.+= +
T Consensus 124 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~-----~~~v~~~~p~nptG~~~~~~~ 195 (422)
T 3fvs_A 124 FFDCYEPMTMMAGGRP---VFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR-----TKALVLNTPNNPLGKVFSREE 195 (422)
T ss_dssp CCTTHHHHHHHTTCEE---EEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTT-----EEEEEEESSCTTTCCCCCHHH
T ss_pred CchhhHHHHHHcCCEE---EEEecccccccccccccccCCCCCHHHHHhhcCCC-----ceEEEECCCCCCCCcCCCHHH
Confidence 4567888899999876 8999875 4589999999988642 22444556888999986 4
Q ss_pred chhhhc-----CCCceeccccccc-cc-----eeeeecC--CC-----ccccccc-----cccccCC---------cccC
Q psy13453 85 LNAPVS-----NGPLKVGGVLRRV-YS-----SCLVPRG--QK-----SLRTTVL-----FHFLFQH---------WQIP 132 (764)
Q Consensus 85 i~~ia~-----~~wlHVDa~l~~~-y~-----s~ll~rd--~~-----~l~~~~s-----~~~d~~d---------~tle 132 (764)
++++++ ++++++|...... |. ++.-... .. ++...|. ..+-... ..-.
T Consensus 196 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~ 275 (422)
T 3fvs_A 196 LELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQN 275 (422)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCHHHHHHHHHHHhh
Confidence 666654 8999999964311 10 1000000 00 0000010 0000000 0000
Q ss_pred CCCcccHHHHHHHHHHc---------cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccc
Q psy13453 133 LGRRFRALKLWMTLRSY---------GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDN 203 (764)
Q Consensus 133 ~SRr~~ALklWatL~~l---------G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~ 203 (764)
.+-....+..++....+ ..+.+.++.++..+..+++.+.|++. +++++.+.....+.+.+...... ...
T Consensus 276 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~~ 353 (422)
T 3fvs_A 276 SVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV-GLKPIIPQGSYFLITDISDFKRK-MPD 353 (422)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEBCSBSSEEEEECHHHHHH-CCC
T ss_pred ccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecCCCeeeEEEEechhhccc-ccc
Confidence 01122334444444433 34567788888889999999999987 88876654444444444211000 000
Q ss_pred cccCccCCccHHHHHHHHHHHh-cCcEEEEecee-------CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 204 LFGTISFGDNDLNKAVYDRIIA-RKVIYIVKGSF-------QDRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 204 ~~~~~~~~~d~~n~~L~~~L~~-~G~~~vs~t~l-------~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
......+....++.++|.+ .|.++...... .+..++|++++. ++++++.+++.|+++.+
T Consensus 354 ---~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~---~~e~i~~~l~~l~~~l~ 420 (422)
T 3fvs_A 354 ---LPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK---DEATLQAMDEKLRKWKV 420 (422)
T ss_dssp ---CCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCC---CHHHHHHHHHHHHHHHH
T ss_pred ---cccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHh
Confidence 0000011113456666554 68755544433 346799998765 89999999999988754
No 359
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=97.62 E-value=0.00029 Score=77.11 Aligned_cols=206 Identities=12% Similarity=0.091 Sum_probs=119.2
Q ss_pred eeeeHHHHH----hhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----
Q psy13453 20 LIYESFKAT----HSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS----- 90 (764)
Q Consensus 20 ~~YSv~KAa----~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~----- 90 (764)
.|.++..++ ...|+.. +.+|++ |+++|+++|+++ +-+++.+.++.++|.+.|++++++
T Consensus 113 ~~~~~~~~~~~~~~~~g~~~---~~~~~~-----d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~ 179 (398)
T 1gc0_A 113 LYGCTFAFLHHGIGEFGVKL---RHVDMA-----DLQALEAAMTPA-----TRVIYFESPANPNMHMADIAGVAKIARKH 179 (398)
T ss_dssp CCSHHHHHHHHTGGGGTCEE---EEECTT-----CHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHGGG
T ss_pred CchhHHHHHHHHHHHcCCEE---EEECCC-----CHHHHHHhcCCC-----CeEEEEECCCCCCcccccHHHHHHHHHHc
Confidence 455555554 6667755 777764 899999998752 224456788899999999999886
Q ss_pred CCCceeccccccc-------c--------------------ceeeeecCCCccccccccccccCCcccCCCCcccHHHHH
Q psy13453 91 NGPLKVGGVLRRV-------Y--------------------SSCLVPRGQKSLRTTVLFHFLFQHWQIPLGRRFRALKLW 143 (764)
Q Consensus 91 ~~wlHVDa~l~~~-------y--------------------~s~ll~rd~~~l~~~~s~~~d~~d~tle~SRr~~ALklW 143 (764)
++++|+|+..... + +++++.++. .+...+. .....+ .+-....+..|
T Consensus 180 ~~~li~D~~~~~~~~~~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~-~~~~~~~----~~~~~~-~~~~~~~~~~~ 253 (398)
T 1gc0_A 180 GATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQA-LVDRIRL----QGLKDM-TGAVLSPHDAA 253 (398)
T ss_dssp TCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHH-HHHHHHH----THHHHH-TCCCCCHHHHH
T ss_pred CCEEEEECCCcccccCCchhhCceEEEECCccccCCCCCCeEEEEEEChH-HHHHHHH----HHhhcc-CCCCCCHHHHH
Confidence 8999999953111 0 122222111 0000000 000000 11123456667
Q ss_pred HHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe--------------CC---CCceeEEEEeecccccccccccc
Q psy13453 144 MTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELV--------------CP---PSMGLVCFRLKVRFWDKLDNLFG 206 (764)
Q Consensus 144 atL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell--------------~~---P~l~iV~Fry~P~~~~~~~~~~~ 206 (764)
+.++.+ +.+..++++..+.++++++.|++++.++-+ .+ ...++++|++..
T Consensus 254 ~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~----------- 320 (398)
T 1gc0_A 254 LLMRGI--KTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG----------- 320 (398)
T ss_dssp HHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT-----------
T ss_pred HHHhcc--chHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC-----------
Confidence 766544 456778888889999999999887765432 11 135677776531
Q ss_pred CccCCccHHHHHHHHHHHhcCcEEEEe--c------------e----------eCC--eeEEEEeccCCCCCHHHHHHHH
Q psy13453 207 TISFGDNDLNKAVYDRIIARKVIYIVK--G------------S----------FQD--RLFMRFAICSSQTEESDVQLGW 260 (764)
Q Consensus 207 ~~~~~~d~~n~~L~~~L~~~G~~~vs~--t------------~----------l~g--~~~LRi~v~np~Tt~e~i~~~l 260 (764)
. ...+.+.+.+.|...... . . ..| ..++|+++.. .+++++++.+.
T Consensus 321 -----~---~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~-~~~~~~i~~l~ 391 (398)
T 1gc0_A 321 -----G---IGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGL-EDIDDLLADVQ 391 (398)
T ss_dssp -----H---HHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCS-SCHHHHHHHHH
T ss_pred -----C---HHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCc-CCHHHHHHHHH
Confidence 1 123344444444432220 0 0 011 3689998876 56788888888
Q ss_pred HHHHHH
Q psy13453 261 NEIRTA 266 (764)
Q Consensus 261 ~~l~~~ 266 (764)
+.|+++
T Consensus 392 ~al~~~ 397 (398)
T 1gc0_A 392 QALKAS 397 (398)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 887654
No 360
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=97.61 E-value=0.00053 Score=73.15 Aligned_cols=96 Identities=8% Similarity=0.012 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEe-CCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEe
Q psy13453 155 QAYLRKHISLAKKFADLVEQDDRFELV-CPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVK 233 (764)
Q Consensus 155 ~~~i~~~i~lA~~l~~~I~~~p~~ell-~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~ 233 (764)
.+.+++..+.++++.+.|++++++++. .++..+.+.+++..+ ...-...+.++|.++|..+...
T Consensus 257 ~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~~l~~~GV~v~~g 321 (359)
T 3pj0_A 257 IGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENS---------------ADEIGAILTKIQDETGVGISGY 321 (359)
T ss_dssp GGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSC---------------HHHHHHHHHHHHHHHCEECCSC
T ss_pred HHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCc---------------cchhHHHHHHHHHhcCcEecCC
Confidence 366777888999999999999999986 566777777766421 0111357888899889754432
Q ss_pred c--eeCCeeEEEEeccCCC--CCHHHHHHHHHHHHH
Q psy13453 234 G--SFQDRLFMRFAICSSQ--TEESDVQLGWNEIRT 265 (764)
Q Consensus 234 t--~l~g~~~LRi~v~np~--Tt~e~i~~~l~~l~~ 265 (764)
. ...+..++|+++..++ .+.+.+++.++.|.+
T Consensus 322 ~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~ 357 (359)
T 3pj0_A 322 LQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEK 357 (359)
T ss_dssp CEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHH
T ss_pred ccccCCCceEEEEEecCccccCCHHHHHHHHHHHHh
Confidence 2 2356788999887665 467888888887765
No 361
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=97.59 E-value=0.00069 Score=73.56 Aligned_cols=199 Identities=11% Similarity=0.075 Sum_probs=116.4
Q ss_pred HHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceecccc
Q psy13453 26 KATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGGVL 100 (764)
Q Consensus 26 KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa~l 100 (764)
+.+...|... +.+|.+ |+++|+++|+++ +-+++.+.++.++|.+-|++++++ ++++++|...
T Consensus 110 ~~~~~~g~~~---~~~~~~-----d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~ 176 (386)
T 1cs1_A 110 SLAKRGCYRV---LFVDQG-----DEQALRAALAEK-----PKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTF 176 (386)
T ss_dssp HHHTTTSCEE---EEECTT-----CHHHHHHHHHTC-----CSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTT
T ss_pred HHHHhcCCEE---EEeCCC-----CHHHHHHhhccC-----CcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCC
Confidence 3456677765 778775 899999999742 235566779999999999999876 8999999964
Q ss_pred ccccc---------------------------eeeeecCCCccccccccccccCCcccCCCCcccHHHHHHHHHHccHHH
Q psy13453 101 RRVYS---------------------------SCLVPRGQKSLRTTVLFHFLFQHWQIPLGRRFRALKLWMTLRSYGLKG 153 (764)
Q Consensus 101 ~~~y~---------------------------s~ll~rd~~~l~~~~s~~~d~~d~tle~SRr~~ALklWatL~~lG~eG 153 (764)
..... ++++.++++... .+ ..+....+-....+..|+.++. .+.
T Consensus 177 ~~~~~~~~~~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~-~l------~~~~~~~~~~~~~~~~~~~~~~--l~~ 247 (386)
T 1cs1_A 177 LSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVT-EL------AWWANNIGVTGGAFDSYLLLRG--LRT 247 (386)
T ss_dssp TCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHH-HH------HHHHHHHTCBCCHHHHHHHHHH--HTT
T ss_pred cccccCCccccCceEEEEcCcccccCCCCceeEEEEeCcHHHHH-HH------HHHHHhcCCCCCHHHHHHHHhc--ccH
Confidence 21110 111111100000 00 0000000111233344444332 234
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC-----------------CceeEEEEeeccccccccccccCccCCccHHH
Q psy13453 154 LQAYLRKHISLAKKFADLVEQDDRFELVCPP-----------------SMGLVCFRLKVRFWDKLDNLFGTISFGDNDLN 216 (764)
Q Consensus 154 y~~~i~~~i~lA~~l~~~I~~~p~~ell~~P-----------------~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n 216 (764)
+.++.++..+.++++.+.+++.+.+.-+.-| ..++++|++. +. .
T Consensus 248 ~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~---~ 308 (386)
T 1cs1_A 248 LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELD----------------GD---E 308 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES----------------SC---H
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEEC----------------CC---H
Confidence 5667788888899999999998776544222 2567778653 11 2
Q ss_pred HHHHHHHHhcCcEEEEe-ce------------e-------------CCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 217 KAVYDRIIARKVIYIVK-GS------------F-------------QDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 217 ~~L~~~L~~~G~~~vs~-t~------------l-------------~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
..+.+.|.+.|.+.... .. . -...++|+++.. ..++++++.+.+.++++
T Consensus 309 ~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~-~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 309 QTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI-EDGEDLIADLENGFRAA 383 (386)
T ss_dssp HHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCS-SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcceEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEcc-CCHHHHHHHHHHHHHHh
Confidence 35667777788744310 00 0 013689998776 55677777777776654
No 362
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=97.57 E-value=0.00039 Score=75.96 Aligned_cols=221 Identities=9% Similarity=0.011 Sum_probs=129.1
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC-CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP-DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd-~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~----~~wl 94 (764)
.|.++..++..+|... +.||++ +++.+|+++|+++|..... ++-+++ ++.++|.+-|++++++ ++++
T Consensus 87 ~~~~~~~~~~~~G~~~---~~v~~~~~~~~~d~~~l~~~i~~~~~--~tk~v~---~~~~~G~~~~~~~i~~la~~~~~v 158 (377)
T 3ju7_A 87 TFPATPLAAIWCGLEP---YFIDISIDDWYMDKTVLWDKIEELKE--EVAIVV---PYATFGSWMNLEEYEELEKKGVPV 158 (377)
T ss_dssp SCTHHHHHHHHTTCEE---EEECBCTTTCSBCHHHHHHHHHHHGG--GEEEEC---CBCGGGBCCCCHHHHHHHHTTCCB
T ss_pred CcHHHHHHHHHcCCEE---EEEecCCccCCcCHHHHHHHHhcCCC--CceEEE---EECCCCCccCHHHHHHHHhcCCEE
Confidence 4677888999999877 999998 6889999999999943210 111322 4567899989988775 8899
Q ss_pred eeccccc--ccc---------ceeeeec--CCCccccc---c--ccccc-------cCCcc--------cCCCC-cccHH
Q psy13453 95 KVGGVLR--RVY---------SSCLVPR--GQKSLRTT---V--LFHFL-------FQHWQ--------IPLGR-RFRAL 140 (764)
Q Consensus 95 HVDa~l~--~~y---------~s~ll~r--d~~~l~~~---~--s~~~d-------~~d~t--------le~SR-r~~AL 140 (764)
|+|++.. ..+ +.+.++. ..+.+... + ..+.+ +.+++ ..+.+ +...+
T Consensus 159 i~D~a~a~g~~~~~~~~g~~~~d~~~~S~~~~K~l~~g~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~ 238 (377)
T 3ju7_A 159 VVDAAPGFGLMNGGMHYGQDFSGMIIYSFHATKPFGIGEGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEY 238 (377)
T ss_dssp EEECTTCTTCEETTEETTTTCSSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHH
T ss_pred EEECCCccCCeECCEeccCCCCcEEEEECCCCCcCCCCCcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHH
Confidence 9999641 111 1011110 01111100 0 00000 11111 11222 55566
Q ss_pred HHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC-C-----ceeEEEEeeccccccccccccCccCCccH
Q psy13453 141 KLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP-S-----MGLVCFRLKVRFWDKLDNLFGTISFGDND 214 (764)
Q Consensus 141 klWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P-~-----l~iV~Fry~P~~~~~~~~~~~~~~~~~d~ 214 (764)
..|+.+.. .+.+.+++++..++++++.+.|++++++.+...| . ...+.++.. . ..+
T Consensus 239 ~aa~~~~~--l~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~- 300 (377)
T 3ju7_A 239 AAAIGIAT--MKKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCP-E--------------EVR- 300 (377)
T ss_dssp HHHHHHHH--HHTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECC-T--------------TSC-
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeC-C--------------hhh-
Confidence 66665554 3778889999999999999999998754221111 1 112334321 0 000
Q ss_pred HHHHHHHHHHhcCcEEEEec--eeC-------------------CeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 215 LNKAVYDRIIARKVIYIVKG--SFQ-------------------DRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 215 ~n~~L~~~L~~~G~~~vs~t--~l~-------------------g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
..++.+.|.++|...-... .++ ....||+ -+++.+++++++.+++.|+++.+
T Consensus 301 -~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~l-p~~~~~t~~di~~v~~~l~~~~~ 373 (377)
T 3ju7_A 301 -NKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSL-PLWEGMTKEIVEQIVICLGQKVV 373 (377)
T ss_dssp -HHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEE-CCCTTCCHHHHHHHHHHHTC---
T ss_pred -HHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEEC-CCCCCCCHHHHHHHHHHHHHHHh
Confidence 2478889998886322111 110 1357888 47888999999999999877653
No 363
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=97.57 E-value=0.00049 Score=75.60 Aligned_cols=229 Identities=9% Similarity=0.014 Sum_probs=128.5
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC----------CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---ch
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD----------SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LN 86 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~----------~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~ 86 (764)
.+.++..+++..|... +.||++. ++.+|+++|+++|++. +-+++-+.++.++|.+=| ++
T Consensus 134 ~y~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~v~~~~p~nptG~~~~~~~l~ 205 (429)
T 1yiz_A 134 FFDCYEPMVKAAGGIP---RFIPLKPNKTGGTISSADWVLDNNELEALFNEK-----TKMIIINTPHNPLGKVMDRAELE 205 (429)
T ss_dssp CCTTHHHHHHHTTCEE---EEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHH
T ss_pred CchhHHHHHHHcCCEE---EEEeCCcccccccccccCcccCHHHHHHHhccC-----ceEEEECCCCCCCCccCCHHHHH
Confidence 4567788888888866 8899975 4689999999998632 223445678889999864 66
Q ss_pred hhhc-----CCCceeccccccc-c-----ceeeeec---CCC----ccccccc-----ccc-----c----c---C-Ccc
Q psy13453 87 APVS-----NGPLKVGGVLRRV-Y-----SSCLVPR---GQK----SLRTTVL-----FHF-----L----F---Q-HWQ 130 (764)
Q Consensus 87 ~ia~-----~~wlHVDa~l~~~-y-----~s~ll~r---d~~----~l~~~~s-----~~~-----d----~---~-d~t 130 (764)
++++ ++++++|...... | .++.-.. +.. ++...+. ..+ + + . ..+
T Consensus 206 ~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~ 285 (429)
T 1yiz_A 206 VVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCV 285 (429)
T ss_dssp HHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCHHHHHHHHHHHhhcc
Confidence 6654 8899999964321 1 0110000 000 0000010 000 0 0 0 001
Q ss_pred cCCCCcccHHHHHHHHHHc----c--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeecccccccccc
Q psy13453 131 IPLGRRFRALKLWMTLRSY----G--LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNL 204 (764)
Q Consensus 131 le~SRr~~ALklWatL~~l----G--~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~ 204 (764)
...+ ......+..+|... | .+.+.++.++..+..+++.+.|++. ++++..+..-..+.+++...... .+
T Consensus 286 ~~~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~--~~- 360 (429)
T 1yiz_A 286 YTCA-TPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV-GMNPTVPQGGYFMVADWSSLDSK--VD- 360 (429)
T ss_dssp CCCC-HHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH-TCEEEECSBSSEEEEECCSSCTT--TT-
T ss_pred cCCC-hHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEEccccccc--cc-
Confidence 1111 11111233344441 4 5557777788888899999999887 78876544344666665321000 00
Q ss_pred ccCccCCccHHHHHHHHHHH-hcCcEEEEeceeC-------CeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 205 FGTISFGDNDLNKAVYDRII-ARKVIYIVKGSFQ-------DRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 205 ~~~~~~~~d~~n~~L~~~L~-~~G~~~vs~t~l~-------g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
. .......-..++.++|. +.|..+....... +..++|+++.+ ++++++.+++.|+++
T Consensus 361 ~--~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~---~~e~i~~~l~~l~~~ 425 (429)
T 1yiz_A 361 L--TQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFK---KDENLQKAAEILRKW 425 (429)
T ss_dssp C--CSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCS---CHHHHHHHHHHHHHH
T ss_pred c--cccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecC---CHHHHHHHHHHHHHh
Confidence 0 00000011356777776 6787544332221 25689998873 789999999999875
No 364
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=97.54 E-value=0.0007 Score=75.26 Aligned_cols=104 Identities=18% Similarity=0.191 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHH-HhcCcEEEEece
Q psy13453 157 YLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRI-IARKVIYIVKGS 235 (764)
Q Consensus 157 ~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L-~~~G~~~vs~t~ 235 (764)
.+++..+.++++.+.|++ ++++++.+.....+.++... -.... ..... -..++.++| .+.|..+.....
T Consensus 324 ~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~--~~~~l~~~L~~~~gv~v~~~g~ 393 (467)
T 1ax4_A 324 YLHYRIGQVKYLGDRLRE-AGIPIQYPTGGHAVFVDCKK-LVPQI------PGDQF--PAQAVINALYLESGVRAVEIGS 393 (467)
T ss_dssp HHHHHHHHHHHHHHHHHH-TTCCBCSSCCSSEEEEESTT-TCTTS------CGGGC--HHHHHHHHHHHHHCEECEEESH
T ss_pred HHHHHHHHHHHHHHHHHh-CCCCcccCCCceEEEEehhh-hcccc------ccCCC--CHHHHHHHHHHhcCceeeecCc
Confidence 455666788899999988 68887655444445454210 00000 00011 135688888 778876544111
Q ss_pred e-------CC------eeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 236 F-------QD------RLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 236 l-------~g------~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
. .+ ..++|+++....+++++++.+++.|+++.+++
T Consensus 394 ~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~ 441 (467)
T 1ax4_A 394 FLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKF 441 (467)
T ss_dssp HHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHH
T ss_pred cccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHhh
Confidence 0 01 36899988766689999999999999887664
No 365
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=97.51 E-value=0.00065 Score=74.78 Aligned_cols=213 Identities=11% Similarity=0.076 Sum_probs=126.4
Q ss_pred eeeHHH----HHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc------
Q psy13453 21 IYESFK----ATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS------ 90 (764)
Q Consensus 21 ~YSv~K----Aa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~------ 90 (764)
|.+... ++...|... +.||++ |+++|+++|+++ +-+++.+.++.++|.+-|++++++
T Consensus 111 y~~~~~~~~~~~~~~g~~~---~~v~~~-----d~~~l~~~i~~~-----t~~v~l~~p~NptG~v~~l~~i~~la~~~~ 177 (404)
T 1e5e_A 111 YGCTHALFEHALTKFGIQV---DFINTA-----IPGEVKKHMKPN-----TKIVYFETPANPTLKIIDMERVCKDAHSQE 177 (404)
T ss_dssp CHHHHHHHHTHHHHTTCEE---EEECTT-----STTHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHTST
T ss_pred chhHHHHHHHHHHHcCCEE---EEECCC-----CHHHHHHhcCCC-----CcEEEEECCCCCCCcccCHHHHHHHHHhhc
Confidence 445555 688888876 888876 889999988642 224456778999999999999764
Q ss_pred CCCceecccccccc-------c-eeeeecCCCcccc------cccc-c---cc--cCCcccCC-CCcccHHHHHHHHHHc
Q psy13453 91 NGPLKVGGVLRRVY-------S-SCLVPRGQKSLRT------TVLF-H---FL--FQHWQIPL-GRRFRALKLWMTLRSY 149 (764)
Q Consensus 91 ~~wlHVDa~l~~~y-------~-s~ll~rd~~~l~~------~~s~-~---~d--~~d~tle~-SRr~~ALklWatL~~l 149 (764)
++++++|....... + .+++..-.+.+.. .+-. . .+ +....... +-....+..|+++..+
T Consensus 178 ~~~li~De~~~~~~~~~~~~~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l 257 (404)
T 1e5e_A 178 GVLVIADNTFCSPMITNPVDFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSVISPHDAWLITRGL 257 (404)
T ss_dssp TCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHH
T ss_pred CCEEEEECCCchhhhCCccccCCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhH
Confidence 57899999542111 1 1111111111110 0000 0 00 00011111 1234556778777766
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC-----------------CceeEEEEeeccccccccccccCccCCc
Q psy13453 150 GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP-----------------SMGLVCFRLKVRFWDKLDNLFGTISFGD 212 (764)
Q Consensus 150 G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P-----------------~l~iV~Fry~P~~~~~~~~~~~~~~~~~ 212 (764)
- .+..++++..+.++++.+.+++.+.++-+.-| .-++++|++. +.
T Consensus 258 ~--~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~----------------~~ 319 (404)
T 1e5e_A 258 S--TLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILK----------------SG 319 (404)
T ss_dssp T--THHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEET----------------TH
T ss_pred h--HHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeC----------------CC
Confidence 3 35667888889999999999988765422211 1567778542 11
Q ss_pred cHHHHHHHHHHHhcCcEEEEecee-------------------------CC--eeEEEEeccCCCCCHHHHHHHHHHHHH
Q psy13453 213 NDLNKAVYDRIIARKVIYIVKGSF-------------------------QD--RLFMRFAICSSQTEESDVQLGWNEIRT 265 (764)
Q Consensus 213 d~~n~~L~~~L~~~G~~~vs~t~l-------------------------~g--~~~LRi~v~np~Tt~e~i~~~l~~l~~ 265 (764)
...+.+.+.+.|.+.. ...+ .| ..++|+++.. ++++.+++.|++
T Consensus 320 ---~~~~~~~l~~~~i~~~-~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~-----e~~~~li~~l~~ 390 (404)
T 1e5e_A 320 ---FEGAKKLLDNLKLITL-AVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI-----EDADELIADFKQ 390 (404)
T ss_dssp ---HHHHHHHHHTCSSSEE-SSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS-----SCHHHHHHHHHH
T ss_pred ---HHHHHHHHHhCCCcee-ccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC-----CCHHHHHHHHHH
Confidence 1234455556665222 1111 22 4689999877 789999999999
Q ss_pred HHHHHHcc
Q psy13453 266 ATEEVLRG 273 (764)
Q Consensus 266 ~~~~i~~~ 273 (764)
+.+.+++.
T Consensus 391 al~~~~~~ 398 (404)
T 1e5e_A 391 GLDALLRS 398 (404)
T ss_dssp HHHHHHCC
T ss_pred HHHHHHHh
Confidence 88776653
No 366
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=97.51 E-value=0.00017 Score=78.92 Aligned_cols=215 Identities=13% Similarity=0.098 Sum_probs=119.5
Q ss_pred eeeeHHHHH----hhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----
Q psy13453 20 LIYESFKAT----HSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS----- 90 (764)
Q Consensus 20 ~~YSv~KAa----~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~----- 90 (764)
.|.++.+++ ...|... +.+|++ |+++|+++|+++ +-+++.+.++.++|.+.|++++++
T Consensus 112 ~~~~~~~~~~~~~~~~g~~~---~~v~~~-----d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~ 178 (398)
T 2rfv_A 112 IYGCTHAFLSHSMPKFGINV---RFVDAA-----KPEEIRAAMRPE-----TKVVYIETPANPTLSLVDIETVAGIAHQQ 178 (398)
T ss_dssp SCHHHHHHHHTHHHHTTCEE---EEECTT-----SHHHHHHHCCTT-----EEEEEEESSBTTTTBCCCHHHHHHHHHHT
T ss_pred CcccHHHHHHHHHHHcCCEE---EEeCCC-----CHHHHHHhcCCC-----CeEEEEECCCCCCCcccCHHHHHHHHHHc
Confidence 455666665 7778766 888875 899999988642 224456788999999999999886
Q ss_pred CCCceecccccccc-------c-eeeeecCCCcccc------cccc-c---cc--cCCcccCC-CCcccHHHHHHHHHHc
Q psy13453 91 NGPLKVGGVLRRVY-------S-SCLVPRGQKSLRT------TVLF-H---FL--FQHWQIPL-GRRFRALKLWMTLRSY 149 (764)
Q Consensus 91 ~~wlHVDa~l~~~y-------~-s~ll~rd~~~l~~------~~s~-~---~d--~~d~tle~-SRr~~ALklWatL~~l 149 (764)
++++|+|......+ . .+++..-.+.+.. .+-. . .+ ...+.... +-....+..|+.+..+
T Consensus 179 ~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 258 (398)
T 2rfv_A 179 GALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTLRGV 258 (398)
T ss_dssp TCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHH
T ss_pred CCEEEEECCCcccccCCchhhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhhh
Confidence 89999999642111 0 0111111111110 0000 0 00 00000001 1123455667766655
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe--------------CC---CCceeEEEEeeccccccccccccCccCCc
Q psy13453 150 GLKGLQAYLRKHISLAKKFADLVEQDDRFELV--------------CP---PSMGLVCFRLKVRFWDKLDNLFGTISFGD 212 (764)
Q Consensus 150 G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell--------------~~---P~l~iV~Fry~P~~~~~~~~~~~~~~~~~ 212 (764)
+.+.+++++..+.++++.+.+++++.++-+ .+ ...++++|++.. .
T Consensus 259 --~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~----------------~ 320 (398)
T 2rfv_A 259 --KTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAG----------------G 320 (398)
T ss_dssp --TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETT----------------H
T ss_pred --hhHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC----------------C
Confidence 335666777788888888888886544332 11 246678886531 1
Q ss_pred cHHHHHHHHHHHhcCcEEEEec-----------e----------eCC--eeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 213 NDLNKAVYDRIIARKVIYIVKG-----------S----------FQD--RLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 213 d~~n~~L~~~L~~~G~~~vs~t-----------~----------l~g--~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
.....++.+++...|....... . ..| ..++|+++.. .+++++++.+.+.++++
T Consensus 321 ~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~-~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 321 LEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGL-EDPEDIINDLEHAIRKA 396 (398)
T ss_dssp HHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCS-SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecC-CCHHHHHHHHHHHHHhh
Confidence 1112334444433332110000 0 012 4689998876 66788888888888764
No 367
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=97.49 E-value=0.0017 Score=73.57 Aligned_cols=230 Identities=10% Similarity=-0.056 Sum_probs=137.2
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC--CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc---cCchhhhc----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD--SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI---QSLNAPVS---- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~--~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i---Dpi~~ia~---- 90 (764)
.|.++..++..+|... +.+|+++ ++.+|+++|+++|++.....++-++|-+.++-++|.+ +.++++++
T Consensus 190 ~y~~~~~~~~~~g~~~---v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~ 266 (498)
T 3ihj_A 190 QYPLYSAVISELDAIQ---VNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWE 266 (498)
T ss_dssp CCTHHHHHHHHTTCEE---EEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHcCCEE---EEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHH
Confidence 3557788899999877 9999985 4699999999999985432122344556888899999 55666654
Q ss_pred -CCCceeccccccc-c------cee-----------------e-eecCCCccccccccccccCCcccCCCC---------
Q psy13453 91 -NGPLKVGGVLRRV-Y------SSC-----------------L-VPRGQKSLRTTVLFHFLFQHWQIPLGR--------- 135 (764)
Q Consensus 91 -~~wlHVDa~l~~~-y------~s~-----------------l-l~rd~~~l~~~~s~~~d~~d~tle~SR--------- 135 (764)
++++++|...... | .++ + +..-.+.+. ++.|-|
T Consensus 267 ~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~------------G~~G~R~G~~~~~~~ 334 (498)
T 3ihj_A 267 EKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYM------------GECGYRGGYMEVINL 334 (498)
T ss_dssp HTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTT------------CCSSSCCEEEEEESC
T ss_pred cCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccc------------cCcccceEEEEEecC
Confidence 8999999864211 1 110 0 101111110 001111
Q ss_pred ----------------cccHHHHHHHHHHcc------------HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCce
Q psy13453 136 ----------------RFRALKLWMTLRSYG------------LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMG 187 (764)
Q Consensus 136 ----------------r~~ALklWatL~~lG------------~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~ 187 (764)
....+..++....+. .+-..++.++..+.++++.+.|+++|++++ .+|+-+
T Consensus 335 ~~~l~~~l~~~~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~-~~p~gg 413 (498)
T 3ihj_A 335 HPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHC-NPLQGA 413 (498)
T ss_dssp CHHHHHHHHHHHHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEC-CCCCBS
T ss_pred CHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEe-cCCCeE
Confidence 112233333333332 112244556677889999999999999886 567777
Q ss_pred eEEE-Eee-ccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEecee---CCeeEEEEeccCCCCCHHHHHHHHHH
Q psy13453 188 LVCF-RLK-VRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSF---QDRLFMRFAICSSQTEESDVQLGWNE 262 (764)
Q Consensus 188 iV~F-ry~-P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l---~g~~~LRi~v~np~Tt~e~i~~~l~~ 262 (764)
...| ++. |........ ..+.+.-...+.+.|.+.|.+++..... .+...+|+++. .++++++.+++.
T Consensus 414 ~~~~~~l~~p~~~~~~~~-----~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~---~~~e~l~~~i~~ 485 (498)
T 3ihj_A 414 MYAFPRIFIPAKAVEAAQ-----AHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTIL---PPVEKLKTVLQK 485 (498)
T ss_dssp SEECCEECCCHHHHHHHH-----HTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECC---SCHHHHHHHHHH
T ss_pred EEEEEeccCchhhhHHHH-----hcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeC---CCHHHHHHHHHH
Confidence 7776 332 111000000 0011111112456667789876654433 45678999984 579999999999
Q ss_pred HHHHHHHHHcc
Q psy13453 263 IRTATEEVLRG 273 (764)
Q Consensus 263 l~~~~~~i~~~ 273 (764)
|.++.++++++
T Consensus 486 L~~~~~~~~~~ 496 (498)
T 3ihj_A 486 VKDFHINFLEK 496 (498)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99998887654
No 368
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=97.49 E-value=0.00048 Score=73.97 Aligned_cols=209 Identities=10% Similarity=0.083 Sum_probs=125.1
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
.|.++..+++..|... +.|| +|+++|+++|++. +-+++-+.++.++|.+-|++ +.+ ++++
T Consensus 122 ~~~~~~~~~~~~g~~~---~~v~------~d~~~l~~~l~~~-----~~~v~~~~p~nptG~~~~~~-l~~~~~~~~~~l 186 (370)
T 2z61_A 122 CYPCYKNFIRFLGAKP---VFCD------FTVESLEEALSDK-----TKAIIINSPSNPLGEVIDRE-IYEFAYENIPYI 186 (370)
T ss_dssp CCTHHHHHHHHTTCEE---EEEC------SSHHHHHHHCCSS-----EEEEEEESSCTTTCCCCCHH-HHHHHHHHCSEE
T ss_pred CchhHHHHHHHcCCEE---EEeC------CCHHHHHHhcccC-----ceEEEEcCCCCCcCcccCHH-HHHHHHHcCCEE
Confidence 4678888899988765 7777 8999999988642 22444567888999998877 654 8899
Q ss_pred eeccccccc-cc----ee-----------eeecCCCccc-cccccccccCCc---------ccCCCCcccHHHHHHHHHH
Q psy13453 95 KVGGVLRRV-YS----SC-----------LVPRGQKSLR-TTVLFHFLFQHW---------QIPLGRRFRALKLWMTLRS 148 (764)
Q Consensus 95 HVDa~l~~~-y~----s~-----------ll~rd~~~l~-~~~s~~~d~~d~---------tle~SRr~~ALklWatL~~ 148 (764)
++|...... +. ++ ++..-.+.+- ..+...+-+... ....+-....+..+++...
T Consensus 187 i~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 266 (370)
T 2z61_A 187 ISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEIIEAILKLQQNLFISAPTISQYAALKA 266 (370)
T ss_dssp EEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHHTSSSCHHHHHHHGGG
T ss_pred EEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHHHHHHHHHHHhhcccCCCHHHHHHHHHH
Confidence 999965321 11 10 0100011110 000000000000 0000012334445555555
Q ss_pred c---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEE-EeeccccccccccccCccCCccHHHHHHHHHHH
Q psy13453 149 Y---GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCF-RLKVRFWDKLDNLFGTISFGDNDLNKAVYDRII 224 (764)
Q Consensus 149 l---G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~F-ry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~ 224 (764)
+ |.+.+.++.++..+..+++.+.|++. ++++.. |+-+.+.| ++. + + ..++.++|.
T Consensus 267 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~----------------~-~--~~~~~~~l~ 325 (370)
T 2z61_A 267 FEKETEREINSMIKEFDRRRRLVLKYVKDF-GWEVNN-PIGAYYVFPNIG----------------E-D--GREFAYKLL 325 (370)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCCC-CCBTTEECCBCS----------------S-C--HHHHHHHHH
T ss_pred HhccCHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecC-CCcceEEEEecC----------------C-C--HHHHHHHHH
Confidence 5 56677888888899999999999987 777643 44444333 221 1 1 246778886
Q ss_pred -hcCcEEEEeceeC--CeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 225 -ARKVIYIVKGSFQ--DRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 225 -~~G~~~vs~t~l~--g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
+.|.......... +..++|+++. +++++++.+++.|.++.
T Consensus 326 ~~~gi~v~~g~~f~~~~~~~~Ri~~~---~~~~~i~~~~~~l~~~l 368 (370)
T 2z61_A 326 KEKFVALTPGIGFGSKGKNYIRISYA---NSYENIKEGLERIKEFL 368 (370)
T ss_dssp HHHCEECEEGGGGCGGGSSBEEEECC---SCHHHHHHHHHHHHHHH
T ss_pred HhCCEEEeCchhhCCCCCCEEEEEEe---CCHHHHHHHHHHHHHHH
Confidence 6787654433222 3568999887 57889999999887764
No 369
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=97.49 E-value=0.00026 Score=75.97 Aligned_cols=212 Identities=13% Similarity=0.024 Sum_probs=128.1
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
.|.++..++..+|... +.+|+++++.+ ++++++++ .. +++-+.+..++|.+=|++++.+ ++++
T Consensus 115 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~--~~l~~~~~------~~-~v~i~~p~nptG~~~~~~~l~~l~~~~~~~l 182 (360)
T 3hdo_A 115 SYSYYGTLAEVQGARV---RTFGLTGDFRI--AGFPERYE------GK-VFFLTTPNAPLGPSFPLEYIDELARRCAGML 182 (360)
T ss_dssp SCTHHHHHHHHHTCEE---EEECBCTTSSB--TTCCSSBC------SS-EEEEESSCTTTCCCCCHHHHHHHHHHBSSEE
T ss_pred ChHHHHHHHHHCCCEE---EEeeCCCCCCH--HHHHhhcC------CC-EEEEeCCCCCCCCCcCHHHHHHHHHHCCCEE
Confidence 4567888999999877 99999887777 44433221 12 5555678899999999888775 8899
Q ss_pred eeccccccccc-----------e-eeeecCCCccc-cccccccccCCc-------ccCCCCcccHHHHHHHHHHcc-HHH
Q psy13453 95 KVGGVLRRVYS-----------S-CLVPRGQKSLR-TTVLFHFLFQHW-------QIPLGRRFRALKLWMTLRSYG-LKG 153 (764)
Q Consensus 95 HVDa~l~~~y~-----------s-~ll~rd~~~l~-~~~s~~~d~~d~-------tle~SRr~~ALklWatL~~lG-~eG 153 (764)
++|.+...... . +++..-.+.+- ..+...+-..+. ....+-....+..+++...+- .+.
T Consensus 183 i~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 262 (360)
T 3hdo_A 183 VLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARPEVIAALDKIRDHYNLDRLAQAACVAALRDQAY 262 (360)
T ss_dssp EEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCHHHHHHHHHHSCSCCSCHHHHHHHHHHHHCHHH
T ss_pred EEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCccceeeEeeCHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCHHH
Confidence 99986431100 0 11111111110 000000000000 000001233444444433332 455
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEe
Q psy13453 154 LQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVK 233 (764)
Q Consensus 154 y~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~ 233 (764)
+.++.++..+..+++.+.|++. ++++. ++..+.+.|+.. +.+ ..++.++|.++|......
T Consensus 263 ~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~----------------~~~--~~~l~~~l~~~gi~v~~~ 322 (360)
T 3hdo_A 263 LSECCRRIRETREWFTTELRSI-GYDVI-PSQGNYLFATPP----------------DRD--GKRVYDGLYARKVLVRHF 322 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCEEC-CCSSSEEEEECT----------------TCC--HHHHHHHHHHTTEECBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCEEc-CCCccEEEEECC----------------CCC--HHHHHHHHHHCCEEEEEC
Confidence 7888889999999999999988 88864 555666666432 111 246778888889754332
Q ss_pred ceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 234 GSFQDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 234 t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
....+..++|+++. ++++++.+++.++++.
T Consensus 323 ~~~~~~~~iRis~~----~~~e~~~l~~al~~~~ 352 (360)
T 3hdo_A 323 SDPLLAHGMRISIG----TREEMEQTLAALKEIG 352 (360)
T ss_dssp CSTTTTTSEEEECC----CHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEEcC----CHHHHHHHHHHHHHHh
Confidence 22233578999876 7899999999998876
No 370
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=97.48 E-value=0.0006 Score=75.52 Aligned_cols=215 Identities=9% Similarity=-0.035 Sum_probs=125.9
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC-CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD-SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGP 93 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~-~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~w 93 (764)
.|.++..++...|... +.+|+++ ++.+|+++|+++|++. +-+++.+- .+|...|++++++ +++
T Consensus 119 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~d~~~l~~~i~~~-----~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~ 187 (437)
T 3bb8_A 119 GFPTTVNPTIQNGLIP---VFVDVDIPTYNVNASLIEAAVSDK-----TKAIMIAH---TLGNLFDLAEVRRVADKYNLW 187 (437)
T ss_dssp SCHHHHHHHHHTTCEE---EECCEETTTTEECGGGHHHHCCTT-----EEEEEEEC---GGGCCCCHHHHHHHHHHHTCE
T ss_pred CcHHHHHHHHHcCCEE---EEEeccCccCCcCHHHHHHhcCCC-----CeEEEEeC---CCCChhcHHHHHHHHHHcCCE
Confidence 5788889999999876 8899885 7999999999998642 22333321 4677789998876 899
Q ss_pred ceecccccc--cc--------c------------------eeeeecCCCccccccccccccCCccc--------------
Q psy13453 94 LKVGGVLRR--VY--------S------------------SCLVPRGQKSLRTTVLFHFLFQHWQI-------------- 131 (764)
Q Consensus 94 lHVDa~l~~--~y--------~------------------s~ll~rd~~~l~~~~s~~~d~~d~tl-------------- 131 (764)
+|+|++... .+ + ++++.++. .+...+. .+..|..
T Consensus 188 li~D~a~~~g~~~~~~~~~~~~d~~~~s~~~~k~l~~g~gg~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 263 (437)
T 3bb8_A 188 LIEDCCDALGSTYDGKMAGTFGDIGTVSFYPAKHITMGEGGAVFTQSA-ELKSIIE---SFRDWGRDCYCAPGCDNTCKK 263 (437)
T ss_dssp EEEECTTCTTCEETTEETTSSSSEEEEECSTTSSSCCSSCEEEEESCH-HHHHHHH---HHHBTTBCC------------
T ss_pred EEEECccccCceECCeecccccCEEEEECcCCcCCCCCCeEEEEeCCH-HHHHHHH---HHHHhCccccccccccccccc
Confidence 999996421 00 1 11111111 0000000 0000110
Q ss_pred ---------------------CCCC-cccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC-----
Q psy13453 132 ---------------------PLGR-RFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPP----- 184 (764)
Q Consensus 132 ---------------------e~SR-r~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P----- 184 (764)
.+.+ +...+..-+.+..+ +.+.+.+++..++++++.+.|++.+++.++..+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~ 341 (437)
T 3bb8_A 264 RFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQL--ERIEEFVEKRKANFKYLKDALQSCADFIELPEATENSD 341 (437)
T ss_dssp ----CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHGGGGTTTEECCCCCTTEE
T ss_pred ccccccccccccccccccccccCcccCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCCCc
Confidence 1111 22344443334332 455777888899999999999998887766321
Q ss_pred -CceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEece--e------C--C--------------e
Q psy13453 185 -SMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGS--F------Q--D--------------R 239 (764)
Q Consensus 185 -~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~--l------~--g--------------~ 239 (764)
...+..+.+..+ .+.+ ..++.+.|.++|...-.... + . + .
T Consensus 342 ~~~~~~~~~~~~~-------------~~~~--~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 406 (437)
T 3bb8_A 342 PSWFGFPITLKED-------------SGVS--RIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMN 406 (437)
T ss_dssp CCCSSEEEEECGG-------------GSSC--HHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHH
T ss_pred eeeEEEEEEECCc-------------CcCc--HHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhc
Confidence 111222322211 0111 24688888888874322110 1 0 0 1
Q ss_pred eEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 240 LFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 240 ~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
..+|+ .+++.+++++++.+++.|+++.
T Consensus 407 ~~lrl-~~~~~~t~~di~~i~~~l~~~~ 433 (437)
T 3bb8_A 407 QTFWI-GIYPGLTHDHLDYVVSKFEEFF 433 (437)
T ss_dssp HEEEE-CCSTTCCHHHHHHHHHHHHHHT
T ss_pred CEEEe-cCCCCCCHHHHHHHHHHHHHHH
Confidence 25898 4788999999999999998764
No 371
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=97.47 E-value=0.00076 Score=75.66 Aligned_cols=153 Identities=14% Similarity=0.150 Sum_probs=92.1
Q ss_pred HHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCC-cEEEEeeCCcccccccCchhhhc-----CCCceecccc
Q psy13453 27 ATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLC-PMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGGVL 100 (764)
Q Consensus 27 Aa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~-p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa~l 100 (764)
.+..+|+.. +.||++ |+++|+++|+++ + -+++...++.++|.+-|++++++ +++++||+..
T Consensus 173 ~~~~~G~~v---~~v~~~-----d~~~l~~ai~~~-----tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~ 239 (445)
T 1qgn_A 173 ILPKMGITA---TVIDPA-----DVGALELALNQK-----KVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTF 239 (445)
T ss_dssp TGGGGTCEE---EEECSS-----CHHHHHHHHHHS-----CEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTT
T ss_pred HHHHcCCEE---EEeCCC-----CHHHHHHHhccC-----CCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCC
Confidence 456678765 788775 899999999864 2 24456778889999999999886 8899999965
Q ss_pred ccccc--------eeeeecCCCcccccc--cccc-----c----cCCcccCCCCcccHHHHHHHHHHccHHHHHHHHHHH
Q psy13453 101 RRVYS--------SCLVPRGQKSLRTTV--LFHF-----L----FQHWQIPLGRRFRALKLWMTLRSYGLKGLQAYLRKH 161 (764)
Q Consensus 101 ~~~y~--------s~ll~rd~~~l~~~~--s~~~-----d----~~d~tle~SRr~~ALklWatL~~lG~eGy~~~i~~~ 161 (764)
...+. -+++..-.+.+-..- ...+ + +..+....+-....+..|+.++ |.+.+..++++.
T Consensus 240 ~~~~~~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~~~~g~~~~~~~a~~~~~--~l~~l~~r~~~~ 317 (445)
T 1qgn_A 240 ATPLNQKALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIR--GMKTLHLRVQQQ 317 (445)
T ss_dssp TCTTTCCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHH--HGGGHHHHHHHH
T ss_pred cccccCCccccCCEEEEECCcccccccccceEEEEEECHHHHHHHHHHHHHhCCCCCHHHHHHHHH--hHHHHHHHHHHH
Confidence 32210 112111111111000 0000 0 0000000001123445566554 335567788899
Q ss_pred HHHHHHHHHHHhcCCCeE-EeCC-----C-----------CceeEEEEee
Q psy13453 162 ISLAKKFADLVEQDDRFE-LVCP-----P-----------SMGLVCFRLK 194 (764)
Q Consensus 162 i~lA~~l~~~I~~~p~~e-ll~~-----P-----------~l~iV~Fry~ 194 (764)
.+.++++++.|+++|+++ +..+ | .-++++|.+.
T Consensus 318 ~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~ 367 (445)
T 1qgn_A 318 NSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVD 367 (445)
T ss_dssp HHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEES
T ss_pred HHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEEC
Confidence 999999999999999984 4433 1 3568888764
No 372
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=97.41 E-value=0.00017 Score=76.69 Aligned_cols=215 Identities=10% Similarity=0.014 Sum_probs=114.3
Q ss_pred HHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCccc-ccccC---chhhhc-----CCCcee
Q psy13453 27 ATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLH-QDIQS---LNAPVS-----NGPLKV 96 (764)
Q Consensus 27 Aa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~-G~iDp---i~~ia~-----~~wlHV 96 (764)
++...|... +.| .++++.+|+++|+++|++....+..+-+ +-+-++-++ |.+=| ++++++ ++++++
T Consensus 96 ~~~~~g~~~---~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~ 171 (347)
T 1jg8_A 96 MAVLSGVMP---HPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHI 171 (347)
T ss_dssp HHHHTCCEE---EEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred hhhccCeEE---EEe-cCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEe
Confidence 567778765 777 5567889999999998641100112333 345566677 98744 444443 899999
Q ss_pred ccccc--------cc------cceeeeecCCCccccc---ccc-cccc----CC--cccCCCCcccHHHHHHHHHHccHH
Q psy13453 97 GGVLR--------RV------YSSCLVPRGQKSLRTT---VLF-HFLF----QH--WQIPLGRRFRALKLWMTLRSYGLK 152 (764)
Q Consensus 97 Da~l~--------~~------y~s~ll~rd~~~l~~~---~s~-~~d~----~d--~tle~SRr~~ALklWatL~~lG~e 152 (764)
|+... .. ++..+.+.-.+.+... +-. ..++ .. ....++-+..++..++....+ +
T Consensus 172 D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~ 249 (347)
T 1jg8_A 172 DGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDRDFIERARKARKMLGGGMRQAGVLAAAGIIAL--T 249 (347)
T ss_dssp EETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHH--H
T ss_pred ehhhhhcchhhcCCChHHhcccccEEEEecccccCCCceEEEEcCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHH--H
Confidence 98421 00 0011111111111100 000 0000 00 000011111222222222111 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEe-CCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEE
Q psy13453 153 GLQAYLRKHISLAKKFADLVEQDDRFELV-CPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYI 231 (764)
Q Consensus 153 Gy~~~i~~~i~lA~~l~~~I~~~p~~ell-~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~v 231 (764)
.+.+.+++..+.++++.+.|++. ++++. .++..+.+.|++... +.+ ..++.++|.+.|..+.
T Consensus 250 ~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~--------------~~~--~~~~~~~l~~~gi~v~ 312 (347)
T 1jg8_A 250 KMVDRLKEDHENARFLALKLKEI-GYSVNPEDVKTNMVILRTDNL--------------KVN--AHGFIEALRNSGVLAN 312 (347)
T ss_dssp HSSTTHHHHHHHHHHHHHHHHHH-TCBCCGGGCCSSEEEEECTTS--------------SSC--HHHHHHHHHHHTEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CceeccCCCcceEEEEEcccc--------------cCC--HHHHHHHHHHCCCEEe
Confidence 22234556667888999999887 77753 345667777765210 111 2467788888887544
Q ss_pred EeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 232 VKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 232 s~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
.. +...+|+++ ...+++++++.+++.|+++.++
T Consensus 313 ~~----~~~~iRl~~-~~~~~~e~i~~~~~~l~~~l~~ 345 (347)
T 1jg8_A 313 AV----SDTEIRLVT-HKDVSRNDIEEALNIFEKLFRK 345 (347)
T ss_dssp EE----ETTEEEEEC-CTTSCHHHHHHHHHHHHHHHHH
T ss_pred cC----CCCeEEEEe-CCCCCHHHHHHHHHHHHHHHHh
Confidence 32 135799954 4567899999999999887654
No 373
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=97.39 E-value=0.0039 Score=68.55 Aligned_cols=228 Identities=9% Similarity=0.074 Sum_probs=126.1
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHh-------hCCCCcEEEE-eeCCcccccccCch---hh
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFR-------KSFLCPMCSG-YCGRTLHQDIQSLN---AP 88 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~-------~~G~~p~~Va-tAGTT~~G~iDpi~---~i 88 (764)
.+.++..+++..|... +.||+++++ +|+++|+++|++.. ...++-+++. ..+..++|.+=|.+ ++
T Consensus 141 ~y~~~~~~~~~~g~~~---~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l 216 (425)
T 2r2n_A 141 AYSGTLQSLHPLGCNI---INVASDESG-IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEI 216 (425)
T ss_dssp CCHHHHHHHGGGTCEE---EEECEETTE-ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHH
T ss_pred CcHHHHHHHHHcCCEE---EEeCcCCCC-CCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHH
Confidence 3457788888999876 889998764 99999999997321 0012234434 56788999987666 55
Q ss_pred hc-----CCCceeccccccc-cc-----ee----------eeecCCCcccccccccc-----c----cCCcccCCCCccc
Q psy13453 89 VS-----NGPLKVGGVLRRV-YS-----SC----------LVPRGQKSLRTTVLFHF-----L----FQHWQIPLGRRFR 138 (764)
Q Consensus 89 a~-----~~wlHVDa~l~~~-y~-----s~----------ll~rd~~~l~~~~s~~~-----d----~~d~tle~SRr~~ 138 (764)
++ ++++++|...... |. ++ ++..-.+.+-..+...+ + +....-..+-...
T Consensus 217 ~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~~l~~~l~~~~~~~~~~~~ 296 (425)
T 2r2n_A 217 YELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKPLIERVILHIQVSTLHPS 296 (425)
T ss_dssp HHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEHHHHHHHHHHHHTTTCSSC
T ss_pred HHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCHHHHHHHHHHHHHhcCCCC
Confidence 43 8899999864211 11 10 11111111110000000 0 0000000011223
Q ss_pred HHHHHHH---HHHccHHHHHHH----HHHHHHHHHHHHHHHhc-CCCeEEeCCCCceeEE-EEeeccccccccccccCcc
Q psy13453 139 ALKLWMT---LRSYGLKGLQAY----LRKHISLAKKFADLVEQ-DDRFELVCPPSMGLVC-FRLKVRFWDKLDNLFGTIS 209 (764)
Q Consensus 139 ALklWat---L~~lG~eGy~~~----i~~~i~lA~~l~~~I~~-~p~~ell~~P~l~iV~-Fry~P~~~~~~~~~~~~~~ 209 (764)
.+..+++ |..++.++|.+. .++..+..+++.+.|++ .|++..+..|.-+... +++ |...
T Consensus 297 ~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~-~~~~----------- 364 (425)
T 2r2n_A 297 TFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKV-KGIN----------- 364 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEE-TTCS-----------
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEe-CCCC-----------
Confidence 3433333 333343444443 34455677788888887 6787544555555433 443 2110
Q ss_pred CCccHHHHHHHHHHHhcCcEEEEeceeC-----CeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 210 FGDNDLNKAVYDRIIARKVIYIVKGSFQ-----DRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 210 ~~~d~~n~~L~~~L~~~G~~~vs~t~l~-----g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
+. ...+.+.|.+.|..+....... +..++|++++. .++++++.+++.|+++.++
T Consensus 365 -~~---~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~--~~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 365 -DV---KELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS--ASPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp -CC---HHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSS--CCHHHHHHHHHHHHHHHHH
T ss_pred -CH---HHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCC--CCHHHHHHHHHHHHHHHHH
Confidence 11 1235777888887665443331 24689998774 4899999999999887654
No 374
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=97.39 E-value=0.0019 Score=70.77 Aligned_cols=226 Identities=8% Similarity=-0.033 Sum_probs=123.0
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEe-eCCcccccccCch---hh---h-c-
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGY-CGRTLHQDIQSLN---AP---V-S- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~Vat-AGTT~~G~iDpi~---~i---a-~- 90 (764)
.+.+...++...|... +.||+++++ +|+++|+++|++. .++-+++.+ .+..++|.+=|.+ ++ + .
T Consensus 133 ~y~~~~~~~~~~g~~~---~~v~~~~~g-~d~~~l~~~l~~~---~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~ 205 (423)
T 3ez1_A 133 GYDRHFLLLQTLGFEL---LTVDMQSDG-PDVDAVERLAGTD---PSVKGILFVPTYSNPGGETISLEKARRLAGLQAAA 205 (423)
T ss_dssp CCHHHHHHHHHHTCEE---EEEEEETTE-ECHHHHHHHHHSC---TTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSS
T ss_pred CcHHHHHHHHHcCCEE---EeccCCCCC-CCHHHHHHHHhhC---CCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhc
Confidence 4567778899999877 999998765 9999999999621 111233333 6789999997666 43 3 2
Q ss_pred -CCCceecccccc--ccc-------eee--------------eecCCCccccccccccc---------cCCcccCCCCcc
Q psy13453 91 -NGPLKVGGVLRR--VYS-------SCL--------------VPRGQKSLRTTVLFHFL---------FQHWQIPLGRRF 137 (764)
Q Consensus 91 -~~wlHVDa~l~~--~y~-------s~l--------------l~rd~~~l~~~~s~~~d---------~~d~tle~SRr~ 137 (764)
++++++|.+... .+. +++ +..-.+.+-.-+...+- +....-..+-..
T Consensus 206 ~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~ 285 (423)
T 3ez1_A 206 PDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSEDNIRWLSKYLGAQSIGP 285 (423)
T ss_dssp TTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECHHHHHHHHHHHHHSCSCC
T ss_pred cCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCHHHHHHHHHHHhhhccCC
Confidence 778899985431 011 100 00000100000000000 000000111233
Q ss_pred cHHHHHHHHHHccH--HHHHHHHHHHHH----H----HHHHHHHHhcCC-CeEEeCCCCceeEEEEeecccccccccccc
Q psy13453 138 RALKLWMTLRSYGL--KGLQAYLRKHIS----L----AKKFADLVEQDD-RFELVCPPSMGLVCFRLKVRFWDKLDNLFG 206 (764)
Q Consensus 138 ~ALklWatL~~lG~--eGy~~~i~~~i~----l----A~~l~~~I~~~p-~~ell~~P~l~iV~Fry~P~~~~~~~~~~~ 206 (764)
..+..+++...+.. +.+.+.+++..+ . .+++.+.+.+.+ .+++..+..-..+.+++..
T Consensus 286 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~----------- 354 (423)
T 3ez1_A 286 NKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAE----------- 354 (423)
T ss_dssp CHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESS-----------
T ss_pred CHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCC-----------
Confidence 44555555555444 334444333322 2 334444455454 4666544334445555421
Q ss_pred CccCCccHHHHHHHHHHHhcCcEEEE-ecee-----CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 207 TISFGDNDLNKAVYDRIIARKVIYIV-KGSF-----QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 207 ~~~~~~d~~n~~L~~~L~~~G~~~vs-~t~l-----~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
. + ...+.+.|.+.|..+.. .... .+..++|+++... ++++++.+++.|.++.+++..
T Consensus 355 ----~-~--~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~--~~~~i~~~~~~l~~~l~~~~~ 417 (423)
T 3ez1_A 355 ----P-V--ADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP--PVEEVRTAMQVVAACIRLATE 417 (423)
T ss_dssp ----S-C--HHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS--CHHHHHHHHHHHHHHHHHHHH
T ss_pred ----C-c--HHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC--CHHHHHHHHHHHHHHHHHHHH
Confidence 1 1 24677888888875543 2111 2457899988544 899999999999998877644
No 375
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=97.38 E-value=0.00039 Score=76.26 Aligned_cols=142 Identities=13% Similarity=0.082 Sum_probs=88.5
Q ss_pred hhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceeccccccc
Q psy13453 29 HSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGGVLRRV 103 (764)
Q Consensus 29 ~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa~l~~~ 103 (764)
..+|+.. +.||++ |+++|+++|+++ +-+++...++.++|.+.|++++++ ++++|+|......
T Consensus 127 ~~~g~~~---~~v~~~-----d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~ 193 (392)
T 3qhx_A 127 TGWNVEY---TPVALA-----DLDAVRAAIRPT-----TRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASP 193 (392)
T ss_dssp GGGTCEE---EEECTT-----CHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCT
T ss_pred HhcCcEE---EEeCCC-----CHHHHHHhhCCC-----CeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCccc
Confidence 6677765 778776 899999999753 224456778889999999999886 8999999964211
Q ss_pred cc--------eeeeecCCCcccc------cccccc--c----cCCcccCCCCcccHHHHHHHHHHccHHHHHHHHHHHHH
Q psy13453 104 YS--------SCLVPRGQKSLRT------TVLFHF--L----FQHWQIPLGRRFRALKLWMTLRSYGLKGLQAYLRKHIS 163 (764)
Q Consensus 104 y~--------s~ll~rd~~~l~~------~~s~~~--d----~~d~tle~SRr~~ALklWatL~~lG~eGy~~~i~~~i~ 163 (764)
+. -+++..-.|.+-. .+-... + +....-..+.+...+..|+.++.+ +.+..++++..+
T Consensus 194 ~~~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l--~~l~~~~~~~~~ 271 (392)
T 3qhx_A 194 ALQQPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGL--KTLVLRMQRHSE 271 (392)
T ss_dssp TTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH--TTHHHHHHHHHH
T ss_pred ccCChHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh--hHHHHHHHHHHH
Confidence 10 0111111111110 000000 0 000111123445667778777644 447788999999
Q ss_pred HHHHHHHHHhcCCCeEEeCCCC
Q psy13453 164 LAKKFADLVEQDDRFELVCPPS 185 (764)
Q Consensus 164 lA~~l~~~I~~~p~~ell~~P~ 185 (764)
.++++++.++++|.+.-+..|.
T Consensus 272 ~~~~l~~~L~~~~~v~~v~~p~ 293 (392)
T 3qhx_A 272 NAAAVAEFLAEHPAISTVLYPG 293 (392)
T ss_dssp HHHHHHHHHHTCTTEEEEECTT
T ss_pred HHHHHHHHHhcCCCcceEECCC
Confidence 9999999999999987665443
No 376
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=97.37 E-value=0.0042 Score=69.85 Aligned_cols=173 Identities=14% Similarity=0.014 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcch
Q psy13453 563 LEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNS 642 (764)
Q Consensus 563 lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~ 642 (764)
.+.++.+.|++++..+.- ...+|+++|||||-.|++.||....+ +-+|.....-|=
T Consensus 108 ~~~~lae~L~~~~p~~~~--------~~v~f~~sGsEA~e~AlklAr~~t~r----------------~~ii~~~~~yHG 163 (456)
T 4atq_A 108 GYVAVTEQLNRLTPGDHA--------KRTVLFNSGAEAVENAVKVARLATGR----------------DAVVAFDHAYHG 163 (456)
T ss_dssp HHHHHHHHHHHHSSCSSC--------EEEEEESSHHHHHHHHHHHHHHHHCC----------------CEEEEETTCCCC
T ss_pred HHHHHHHHHHHhCCCCCC--------cEEEEeCChHHHHHHHHHHHhhhhcC----------------CeEEEEecccCC
Confidence 444566778888743211 23578999999999999999976321 123444455554
Q ss_pred hHHHHHHhCC-------------CceEEEecCC------CCcccHHHHHHHHHHhhh--cCCCceEEEEeeccCCccccc
Q psy13453 643 SVEKSAIIGD-------------VPVRQLRSDD------NGVLRGDALLTAVKEDLA--KGLIPCCLIATLGTTGTCAFD 701 (764)
Q Consensus 643 Sv~kAa~~lG-------------l~v~~Vp~d~------~g~md~~~Le~~I~~~~~--~G~~p~~VvataGTT~~GaiD 701 (764)
...-+..+.+ -.+..+|... ...-+.+.+++.++...+ .+..+.+|++=--....|.+-
T Consensus 164 ~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~ 243 (456)
T 4atq_A 164 RTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIV 243 (456)
T ss_dssp SSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBC
T ss_pred ccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccc
Confidence 4333333321 1466777531 122345566655543221 233445555433333345553
Q ss_pred ----cHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccCCCCcCcee
Q psy13453 702 ----NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVNFDCSA 762 (764)
Q Consensus 702 ----pl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P~~~g~ 762 (764)
=+++|+++|++||+.|++|-.+.|+.....-+.+..-|+ ..|-+|+. |.++.-+..|+
T Consensus 244 p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~g--K~lggg~P~~a 305 (456)
T 4atq_A 244 PAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGV-VPDIITMA--KGIAGGLPLSA 305 (456)
T ss_dssp CCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEEC--GGGGTTSSCEE
T ss_pred cchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCC-CCchhhhh--hcccCcCCcee
Confidence 499999999999999999999988544333333333466 57988886 54444344444
No 377
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=97.36 E-value=0.0023 Score=68.55 Aligned_cols=219 Identities=11% Similarity=0.005 Sum_probs=126.6
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCccc-HHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc-----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLA-YLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS----- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD-~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~----- 90 (764)
.|.++..+++.+|... +.||++....++ ++++.+++. .++-+++-+-++.++|.+=| ++++++
T Consensus 107 ~y~~~~~~~~~~g~~~---~~v~~~~~~~~~~l~~~~~~~~-----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~ 178 (364)
T 1lc5_A 107 GFAEYGRALAQSGCEI---RRWSLREADGWQLTDAILEALT-----PDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSL 178 (364)
T ss_dssp CCTHHHHHHHHTTCEE---EEEECCGGGTTCCCTTHHHHCC-----TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCeE---EEEeCCcccccchhHHHHHhcc-----CCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhc
Confidence 4567888899999876 889998522344 344444332 12234445667889999877 666654
Q ss_pred CCCceeccccccc-cc--e-----------eeeecCCCccc-ccccccccc-CCcc-------cCCCCcccHHHHHHHHH
Q psy13453 91 NGPLKVGGVLRRV-YS--S-----------CLVPRGQKSLR-TTVLFHFLF-QHWQ-------IPLGRRFRALKLWMTLR 147 (764)
Q Consensus 91 ~~wlHVDa~l~~~-y~--s-----------~ll~rd~~~l~-~~~s~~~d~-~d~t-------le~SRr~~ALklWatL~ 147 (764)
++++++|...... +. + +++..-.+.+- .-+...+-+ .+.. ...+-....+..+++..
T Consensus 179 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 258 (364)
T 1lc5_A 179 NINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMPWSVNALAALAGEV 258 (364)
T ss_dssp TCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHSCTTCSCHHHHHHHHH
T ss_pred CcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 8899999964211 10 0 11111111110 000000000 1000 00011344566666666
Q ss_pred HccH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhc
Q psy13453 148 SYGL-KGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIAR 226 (764)
Q Consensus 148 ~lG~-eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~ 226 (764)
.+-. +.+.++.++..+..+++.+.+++.|++++. ++.-+.+.|++. . + ..++.++|.++
T Consensus 259 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~g~~~~~~~~-~--------------~----~~~l~~~l~~~ 318 (364)
T 1lc5_A 259 ALQDSAWQQATWHWLREEGARFYQALCQLPLLTVY-PGRANYLLLRCE-R--------------E----DIDLQRRLLTQ 318 (364)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEC-CCSSSEEEEEES-C--------------T----TCCHHHHHHTT
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCEEC-CCCCeEEEEECC-C--------------c----HHHHHHHHHHC
Confidence 6543 456777777888899999999998899875 556666666542 1 1 12467778888
Q ss_pred CcEEEEeceeC--CeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 227 KVIYIVKGSFQ--DRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 227 G~~~vs~t~l~--g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
|..+....... +..++|+++. ++++++.+++.++++.+++
T Consensus 319 gi~v~~g~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 319 RILIRSCANYPGLDSRYYRVAIR----SAAQNERLLAALRNVLTGI 360 (364)
T ss_dssp TEECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHC---
T ss_pred CcEEeeCcccCCCCCCEEEEEeC----CHHHHHHHHHHHHHHhhcc
Confidence 87655443332 3568999864 5788999999888875543
No 378
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=97.36 E-value=0.0035 Score=69.72 Aligned_cols=207 Identities=13% Similarity=-0.006 Sum_probs=115.4
Q ss_pred EEecCC-CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceeccccccc---------
Q psy13453 39 RLSGLP-DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGGVLRRV--------- 103 (764)
Q Consensus 39 ~~Vpvd-~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa~l~~~--------- 103 (764)
+.+|++ +++.+|+++|++++++.+ .-+++.+.+.++++. +++++++ ++++++|......
T Consensus 161 ~~~~~~~~~~~~d~~~l~~~i~~~~----~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~ 234 (447)
T 3h7f_A 161 GFYGVDPATHLIDMDAVRATALEFR----PKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPS 234 (447)
T ss_dssp EEECCCTTTCSCCHHHHHHHHHHHC----CSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCC
T ss_pred EEcCcCcccCCcCHHHHHHHHHhcC----CeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCC
Confidence 456776 578999999999997642 124444455555554 7777765 8999999963110
Q ss_pred ---cceeeeecCCCcccc---cccc-cccc-------CCcccCCCCc-ccHHHHHHHHHHccHHHHHHHHHHHHHHHHHH
Q psy13453 104 ---YSSCLVPRGQKSLRT---TVLF-HFLF-------QHWQIPLGRR-FRALKLWMTLRSYGLKGLQAYLRKHISLAKKF 168 (764)
Q Consensus 104 ---y~s~ll~rd~~~l~~---~~s~-~~d~-------~d~tle~SRr-~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l 168 (764)
...+++..-.+.+.+ .+-. ..++ ......++-. .....+.+++...-.+++.++.++..+.++++
T Consensus 235 ~~~~~di~~~s~sK~l~G~~gG~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l 314 (447)
T 3h7f_A 235 PVPHADVVSTTVHKTLGGGRSGLIVGKQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARII 314 (447)
T ss_dssp STTTCSEEEEESSGGGCCCSCEEEEECGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcEEEecCCcCCCCCCeEEEEECHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 011222111122210 0000 0000 0111122221 12345556666666678899999999999999
Q ss_pred HHHHhcC----CCeEEeCCC-CceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEE----e--ceeC
Q psy13453 169 ADLVEQD----DRFELVCPP-SMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIV----K--GSFQ 237 (764)
Q Consensus 169 ~~~I~~~----p~~ell~~P-~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs----~--t~l~ 237 (764)
.+.|++. ++++++..+ ..+.+.+.+.+.+ .+ ...+.+.|.+.|..... . ...-
T Consensus 315 ~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--------------~~--~~~~~~~l~~~GI~v~~~~i~~~~~~p~ 378 (447)
T 3h7f_A 315 ADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSP--------------LD--GQAAEDLLHEVGITVNRNAVPNDPRPPM 378 (447)
T ss_dssp HHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSS--------------CC--HHHHHHHHHHTTEECBC-----------
T ss_pred HHHHHhccccCCCeEEecCCCCCCEEEEEcCCCC--------------CC--HHHHHHHHHHCCeEEecccCCCCCCCCC
Confidence 9999986 589987633 4445555443211 11 13455566666764320 0 0111
Q ss_pred CeeEEEEeccC---CCCCHHHHHHHHHHHHHHH
Q psy13453 238 DRLFMRFAICS---SQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 238 g~~~LRi~v~n---p~Tt~e~i~~~l~~l~~~~ 267 (764)
....+|+.... ...++++++++++.|+++.
T Consensus 379 ~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l 411 (447)
T 3h7f_A 379 VTSGLRIGTPALATRGFGDTEFTEVADIIATAL 411 (447)
T ss_dssp --CEEEEECHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred CCCceeccCHHHhhCCCCHHHHHHHHHHHHHHH
Confidence 24569985422 2367899999999988765
No 379
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=97.34 E-value=0.00035 Score=75.99 Aligned_cols=227 Identities=9% Similarity=0.014 Sum_probs=127.1
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC-----------CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc---cCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP-----------DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI---QSL 85 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd-----------~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i---Dpi 85 (764)
.|.++..++...|... +.+|++ .++.+|+++|++++++. +-+++-+.++.++|.+ +++
T Consensus 118 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~-----~~~v~~~~p~nptG~~~~~~~l 189 (410)
T 3e2y_A 118 FYDCYEPMVRMAGAVP---VFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSK-----TKAIILNTPHNPLGKVYTRQEL 189 (410)
T ss_dssp CCTTHHHHHHHTTCEE---EEEECEECCCCSSCCBGGGEECCHHHHHTTCCTT-----EEEEEEESSCTTTCCCCCHHHH
T ss_pred CchhhHHHHHHcCCEE---EEEeccccccccccccccCCcCCHHHHHhhcCCC-----ceEEEEeCCCCCCCcCcCHHHH
Confidence 3467788889999876 888886 46679999999988642 2244456788999999 778
Q ss_pred hhhhc-----CCCceeccccccc-cc-----ee----------eeec-CCCccc-cccccccccC---------CcccCC
Q psy13453 86 NAPVS-----NGPLKVGGVLRRV-YS-----SC----------LVPR-GQKSLR-TTVLFHFLFQ---------HWQIPL 133 (764)
Q Consensus 86 ~~ia~-----~~wlHVDa~l~~~-y~-----s~----------ll~r-d~~~l~-~~~s~~~d~~---------d~tle~ 133 (764)
+++++ ++++++|...... |. ++ +... -.+.+- .-+...+-.. ...-..
T Consensus 190 ~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~ 269 (410)
T 3e2y_A 190 QVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQTVQQNS 269 (410)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECHHHHHHHHHHHHhh
Confidence 88775 8999999964211 10 10 0000 000000 0000000000 000000
Q ss_pred CCcccHHHHHHHHHHc---------cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeecccccccccc
Q psy13453 134 GRRFRALKLWMTLRSY---------GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNL 204 (764)
Q Consensus 134 SRr~~ALklWatL~~l---------G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~ 204 (764)
+-....+..+++...+ ..+.+.++.++..+..+++.+.|++. ++++..+..-..+.+.+.... ...+
T Consensus 270 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-~~~~-- 345 (410)
T 3e2y_A 270 FYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV-GLKPIVPDGGYFIIADVSSLG-ADLS-- 345 (410)
T ss_dssp TCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT-TCEEEBCSBSSEEEEECGGGC-CCCT--
T ss_pred ccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCccEEEEEEchhhh-cccc--
Confidence 1112233333333332 35567788888888999999999987 888765444334444432100 0000
Q ss_pred ccCccCCccH-HHHHHHHHHH-hcCcEEEEeceeC-------CeeEEEEeccCCCCCHHHHHHHHHHHHH
Q psy13453 205 FGTISFGDND-LNKAVYDRII-ARKVIYIVKGSFQ-------DRLFMRFAICSSQTEESDVQLGWNEIRT 265 (764)
Q Consensus 205 ~~~~~~~~d~-~n~~L~~~L~-~~G~~~vs~t~l~-------g~~~LRi~v~np~Tt~e~i~~~l~~l~~ 265 (764)
....+. -..++.+++. +.|.++....... +..++|++++. ++++++++++.|++
T Consensus 346 ----~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~---~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 346 ----DMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIK---KDSTLDAAEEIFRA 408 (410)
T ss_dssp ----TCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCC---CHHHHHHHHHHHHT
T ss_pred ----cccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcC---CHHHHHHHHHHHHh
Confidence 000011 1235555554 5687655444332 24789998765 89999999998864
No 380
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=97.34 E-value=0.00092 Score=73.07 Aligned_cols=224 Identities=8% Similarity=-0.056 Sum_probs=129.5
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCC--CcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDS--EWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS---- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~--~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~---- 90 (764)
.|.++..++..+|... +.+|++++ +.+|+++|+++|++ ++-+++-+.++.++|.+=| ++++++
T Consensus 132 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~d~~~l~~~i~~-----~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~ 203 (412)
T 2x5d_A 132 SYPIHIYGAVIAGAQV---RSVPLVPGIDFFNELERAIRESIP-----KPRMMILGFPSNPTAQCVELDFFERVVALAKQ 203 (412)
T ss_dssp CCHHHHHHHHHHTCEE---EEEECSTTSCHHHHHHHHHHTEES-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHcCCEE---EEeecCCccCCCCCHHHHHHhccc-----CceEEEECCCCCCCCCcCCHHHHHHHHHHHHH
Confidence 4567888889999876 88999864 46899999998863 2234544677888999855 455544
Q ss_pred -CCCceeccccccc-c-c----ee-----------eeecCCCccc-cccccccccCCc---------ccCCCCcccHHHH
Q psy13453 91 -NGPLKVGGVLRRV-Y-S----SC-----------LVPRGQKSLR-TTVLFHFLFQHW---------QIPLGRRFRALKL 142 (764)
Q Consensus 91 -~~wlHVDa~l~~~-y-~----s~-----------ll~rd~~~l~-~~~s~~~d~~d~---------tle~SRr~~ALkl 142 (764)
++++++|...... + + ++ ++..-.+.+- .-+...+-+.+. ....+-....+..
T Consensus 204 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 283 (412)
T 2x5d_A 204 YDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQ 283 (412)
T ss_dssp HTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred cCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCHHHHHHHHHHHhhhccCCCHHHH
Confidence 8899999964221 1 0 10 0110011110 000000000000 0000112233444
Q ss_pred HHHHHH--ccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCcee-EEEEeeccccccccccccCccCCccHHHHHH
Q psy13453 143 WMTLRS--YGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGL-VCFRLKVRFWDKLDNLFGTISFGDNDLNKAV 219 (764)
Q Consensus 143 WatL~~--lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~i-V~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L 219 (764)
+++... .+.+.+.++.++..+..+++.+.|++. +++++ .|+.+. +.+++. .+.. ..+ ..++
T Consensus 284 ~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~g~~~~~~~~-~~~~-----------~~~--~~~~ 347 (412)
T 2x5d_A 284 VAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREA-GWMVE-NPKASMYVWAKIP-EPYA-----------HLG--SLEF 347 (412)
T ss_dssp HHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHH-TCCCC-CCSBSSEEEEECC-TTTG-----------GGC--HHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEec-CCCeeeEEEEEcC-CccC-----------CCC--HHHH
Confidence 443333 355678888888889999999999987 77754 455453 445442 1100 001 2467
Q ss_pred HHHHHh-cCcEEEEeceeC--CeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 220 YDRIIA-RKVIYIVKGSFQ--DRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 220 ~~~L~~-~G~~~vs~t~l~--g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
.++|.+ .|..+....... +..++|+++.. ++++++.+++.+.++.+++
T Consensus 348 ~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~---~~~~l~~~l~~l~~~l~~~ 398 (412)
T 2x5d_A 348 AKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE---NRDRLRQAVRGIKAMFRAD 398 (412)
T ss_dssp HHHHHHHHCEECEEGGGGCGGGTTEEEEECCS---CHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCEEEeCchhhCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHHhc
Confidence 778765 587655443332 34689998875 6889999999998877653
No 381
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=97.29 E-value=0.0015 Score=71.35 Aligned_cols=218 Identities=7% Similarity=0.038 Sum_probs=127.6
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC-CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc-----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD-SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS----- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~-~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~----- 90 (764)
.+.++..++...|... +.||+++ .+.+|+++|+++|+... -+++-+.++.++|.+=| ++++++
T Consensus 142 ~y~~~~~~~~~~g~~~---~~v~~~~~~~~~d~~~l~~~l~~~~-----~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~ 213 (404)
T 2o1b_A 142 GYTDYLAGVLLADGKP---VPLNLEPPHYLPDWSKVDSQIIDKT-----KLIYLTYPNNPTGSTATKEVFDEAIAKFKGT 213 (404)
T ss_dssp CCSSHHHHHHHTTCEE---EEEECCTTTCCCCGGGSCHHHHHHE-----EEEEECSSCTTTCCCCCHHHHHHHHHHHTTS
T ss_pred CchhHHHHHHHCCCEE---EEeccCcccCcCCHHHHHHhhccCc-----eEEEEcCCCCCCCccCCHHHHHHHHHHHHHc
Confidence 4677888999999876 8899986 55799999999997532 24434568889999855 445543
Q ss_pred CCCceeccccccc-cc----e-----------eeeecCCCccc-cccccccccCCc---------ccCCCCcccHHHHHH
Q psy13453 91 NGPLKVGGVLRRV-YS----S-----------CLVPRGQKSLR-TTVLFHFLFQHW---------QIPLGRRFRALKLWM 144 (764)
Q Consensus 91 ~~wlHVDa~l~~~-y~----s-----------~ll~rd~~~l~-~~~s~~~d~~d~---------tle~SRr~~ALklWa 144 (764)
++++++|...... +. + +++..-.+.+- ..+...+-+.+. ....+-....+..++
T Consensus 214 ~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a 293 (404)
T 2o1b_A 214 DTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDA 293 (404)
T ss_dssp SCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_pred CCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCHHHHHHHHHHHhhccCCCCHHHHHH
Confidence 7899999864211 10 0 11111111110 000000000000 000001223344444
Q ss_pred HHHHc--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCcee-EEEEeeccccccccccccCccCCccHHHHHHHH
Q psy13453 145 TLRSY--GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGL-VCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYD 221 (764)
Q Consensus 145 tL~~l--G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~i-V~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~ 221 (764)
+...+ |.+.+.++.++..+..+++.+.|++. ++++.. |+.+. +.+++. . ..+ ..++.+
T Consensus 294 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~g~~~~~~~~-~--------------~~~--~~~l~~ 354 (404)
T 2o1b_A 294 AIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKA-DLPFVH-AKGGIYVWLETP-P--------------GYD--SEQFEQ 354 (404)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEC-CCBSSEEEEECC-T--------------TCC--HHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCeecC-CCcceEEEEeCC-C--------------CCC--HHHHHH
Confidence 44443 45667778888888999999999987 787654 55554 445442 1 111 246777
Q ss_pred HHH-hcCcEEEEeceeC--CeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 222 RII-ARKVIYIVKGSFQ--DRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 222 ~L~-~~G~~~vs~t~l~--g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
+|. +.|..+....... +..++|+++.. ++++++.+++.|+++.
T Consensus 355 ~l~~~~gi~v~~g~~f~~~~~~~iRis~~~---~~e~l~~~l~~l~~~l 400 (404)
T 2o1b_A 355 FLVQEKSILVAPGKPFGENGNRYVRISLAL---DDQKLDEAAIRLTELA 400 (404)
T ss_dssp HHHHHHCEECEESGGGCGGGTTEEEEECCS---CTTHHHHHHHHHHGGG
T ss_pred HHHHHCCEEEeCchhhCcCCCCeEEEEEcC---CHHHHHHHHHHHHHHH
Confidence 776 4687654433222 35689998875 5678998888887654
No 382
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=97.26 E-value=0.0073 Score=68.24 Aligned_cols=170 Identities=12% Similarity=0.063 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCc
Q psy13453 561 TELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQS 640 (764)
Q Consensus 561 t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~a 640 (764)
+..+.++.+.|+++...+- ....|+.+|||||-.|+++||.....+.+. ..+.+|-....-
T Consensus 110 ~~~~~~lAe~L~~~~p~~~---------~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~----------~r~~ii~~~~~y 170 (473)
T 4e3q_A 110 SDQTVMLSEKLVEVSPFDS---------GRVFYTNSGSEANDTMVKMLWFLHAAEGKP----------QKRKILTRWNAY 170 (473)
T ss_dssp EHHHHHHHHHHHHHSSCSS---------CEEEEESSHHHHHHHHHHHHHHHHHHTTCT----------TCCEEEEETTCC
T ss_pred CHHHHHHHHHHHhhCCCCc---------cEEEEeCchHHHHHHHHHHHHHHHHhcCCC----------CcceEEEeeceE
Confidence 3445567778888875432 246799999999999999999765433111 112234444555
Q ss_pred chhHHHHHHhCCC-----------ceEEEecC------CCCcc-------cHHHHHHHHHHhhhcCCCceEEEEeeccCC
Q psy13453 641 NSSVEKSAIIGDV-----------PVRQLRSD------DNGVL-------RGDALLTAVKEDLAKGLIPCCLIATLGTTG 696 (764)
Q Consensus 641 H~Sv~kAa~~lGl-----------~v~~Vp~d------~~g~m-------d~~~Le~~I~~~~~~G~~p~~VvataGTT~ 696 (764)
|=...-++.+.|- .+..++.. ..+.. ..++|++.|.+.. .....+|++=--...
T Consensus 171 HG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~iAavi~EPiqg~ 248 (473)
T 4e3q_A 171 HGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREG--ADTIAGFFAEPVMGA 248 (473)
T ss_dssp CCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBST
T ss_pred CCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhC--CCceEEEEeCCccCC
Confidence 6444444444331 34455532 22222 1345566665431 123444444333333
Q ss_pred ccccc----cHHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCCcccEEEEcCCccC
Q psy13453 697 TCAFD----NLEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWL 754 (764)
Q Consensus 697 ~GaiD----pl~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l 754 (764)
.|.+- =+++|+++|++||+.|++|=.+.|+-....-+....-|+ ..|-+++. |.+
T Consensus 249 gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-~PDi~t~~--K~l 307 (473)
T 4e3q_A 249 GGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDF-TPDAIISS--KNL 307 (473)
T ss_dssp TTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTC-CCSEEEEC--GGG
T ss_pred CCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCC-CCChHHhc--ccc
Confidence 45553 489999999999999999999888643333233333455 46877764 544
No 383
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=97.23 E-value=0.00079 Score=74.66 Aligned_cols=150 Identities=12% Similarity=0.121 Sum_probs=91.8
Q ss_pred eeeHHHHHh----hcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----C
Q psy13453 21 IYESFKATH----SLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----N 91 (764)
Q Consensus 21 ~YSv~KAa~----~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~ 91 (764)
|.+...++. .+|+.. +.||++ |+++|+++|+++ +-+++...++.++|.+.|++++++ +
T Consensus 130 y~~~~~~~~~~~~~~g~~~---~~v~~~-----d~~~l~~ai~~~-----t~~v~le~p~NptG~~~~l~~i~~la~~~g 196 (414)
T 3ndn_A 130 FGSCFVVCSEILPRWGVQT---VFVDGD-----DLSQWERALSVP-----TQAVFFETPSNPMQSLVDIAAVTELAHAAG 196 (414)
T ss_dssp CHHHHHHHHTHHHHTTCEE---EEECTT-----CHHHHHHHTSSC-----CSEEEEESSCTTTCCCCCHHHHHHHHHHTT
T ss_pred cchHHHHHHHHHHHcCcEE---EEeCCC-----CHHHHHHhcCCC-----CeEEEEECCCCCCCccccHHHHHHHHHHcC
Confidence 334444443 378766 888876 899999998653 235556889999999999999886 8
Q ss_pred CCceeccccccc-------cc-eeeeecCCCccccc------ccc-ccccCC-----cccCCCCcccHHHHHHHHHHccH
Q psy13453 92 GPLKVGGVLRRV-------YS-SCLVPRGQKSLRTT------VLF-HFLFQH-----WQIPLGRRFRALKLWMTLRSYGL 151 (764)
Q Consensus 92 ~wlHVDa~l~~~-------y~-s~ll~rd~~~l~~~------~s~-~~d~~d-----~tle~SRr~~ALklWatL~~lG~ 151 (764)
+++++|...... ++ -+++..-.|.+-.. +-. ..+... +.-..+-....+..|+.++ |.
T Consensus 197 ~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~--~l 274 (414)
T 3ndn_A 197 AKVVLDNVFATPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLK--GL 274 (414)
T ss_dssp CEEEEECTTTHHHHCCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCCHHHHHHHHH--HG
T ss_pred CEEEEECCCcccccCCchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCCHHHHHHHHH--HH
Confidence 899999954211 11 11221111111110 000 000000 0000122335566677665 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC
Q psy13453 152 KGLQAYLRKHISLAKKFADLVEQDDRFELVCPPS 185 (764)
Q Consensus 152 eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~ 185 (764)
+.+..++++..+.++++++.|+++|.+.-+.-|.
T Consensus 275 ~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~ 308 (414)
T 3ndn_A 275 ETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPY 308 (414)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCC
Confidence 6678889999999999999999999987665554
No 384
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=97.20 E-value=0.0023 Score=71.04 Aligned_cols=100 Identities=11% Similarity=0.094 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeec--cccccccccccCccCCccHH-HHHHHHHH-HhcCcEEE
Q psy13453 156 AYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKV--RFWDKLDNLFGTISFGDNDL-NKAVYDRI-IARKVIYI 231 (764)
Q Consensus 156 ~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P--~~~~~~~~~~~~~~~~~d~~-n~~L~~~L-~~~G~~~v 231 (764)
+.+++..+.++++.+.|++. +++++ ++....+.|.+.. ++. +.+++ ..++.++| .+.|..+.
T Consensus 325 ~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~~L~~~~gv~~~ 390 (467)
T 2oqx_A 325 DWLAYRIAQVQYLVDGLEEI-GVVCQ-QAGGHAAFVDAGKLLPHI------------PADQFPAQALACELYKVAGIRAV 390 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCCEE-EECSSCEEEEHHHHSTTS------------CGGGCHHHHHHHHHHHHHCEECE
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCeee-cCCceEEEEechhhcccC------------CcccccHHHHHHHHHHhcCceec
Confidence 35666778899999999987 88877 5445556665421 010 11233 46778888 78887654
Q ss_pred Eecee-------------CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 232 VKGSF-------------QDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 232 s~t~l-------------~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
..... .+..++|+++....+++++++.+++.|+++.++
T Consensus 391 ~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~ 441 (467)
T 2oqx_A 391 EIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_dssp EESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHS
T ss_pred ccccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhh
Confidence 32210 013689997654437899999999999888654
No 385
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=97.19 E-value=0.0033 Score=69.08 Aligned_cols=224 Identities=8% Similarity=-0.002 Sum_probs=122.2
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEe-eCCcccccccCch---hh---h-c-
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGY-CGRTLHQDIQSLN---AP---V-S- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~Vat-AGTT~~G~iDpi~---~i---a-~- 90 (764)
.+.+...+++..|... +.||+++++ +|+++|+++|++. ++-+++.+ .++.++|.+=|.+ ++ + .
T Consensus 142 ~y~~~~~~~~~~g~~~---~~v~~~~~g-~d~~~l~~~l~~~----~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~ 213 (427)
T 3ppl_A 142 GYDRHFSITERFGFEM---ISVPMNEDG-PDMDAVEELVKNP----QVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAA 213 (427)
T ss_dssp CCHHHHHHHHHTTCEE---EEEEEETTE-ECHHHHHHHTTST----TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSS
T ss_pred CcHHHHHHHHHcCCEE---EEeCCCCCC-CCHHHHHHHHhcC----CCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhc
Confidence 4566788899999877 999999876 9999999998421 12234444 7789999996666 43 3 3
Q ss_pred -CCCceeccccccc-cc-------eee--------------eecCCCccccccccccccCC---------cccCCCCccc
Q psy13453 91 -NGPLKVGGVLRRV-YS-------SCL--------------VPRGQKSLRTTVLFHFLFQH---------WQIPLGRRFR 138 (764)
Q Consensus 91 -~~wlHVDa~l~~~-y~-------s~l--------------l~rd~~~l~~~~s~~~d~~d---------~tle~SRr~~ 138 (764)
++++++|...... |. ++. +..-.+.+-.-+...+-... ..-..+.+..
T Consensus 214 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~~~ 293 (427)
T 3ppl_A 214 PDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAENRKWYTGHAGIRGIGPN 293 (427)
T ss_dssp TTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCHHHHHHHHHHHHHHCSCCC
T ss_pred CCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCHHHHHHHHHHhhcccCCCC
Confidence 6789999864221 11 000 00000100000000000000 0000112334
Q ss_pred HHHHHHHHHHccH-HHHHHHHH----HHHHHHHHHHHHHh----cCCCeEEeCCCCceeEEEEeeccccccccccccCcc
Q psy13453 139 ALKLWMTLRSYGL-KGLQAYLR----KHISLAKKFADLVE----QDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTIS 209 (764)
Q Consensus 139 ALklWatL~~lG~-eGy~~~i~----~~i~lA~~l~~~I~----~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~ 209 (764)
.+..++....+.. +.+.+.++ ..-+..+++.+.|+ ..+++.+..+..-..+.+++..
T Consensus 294 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~-------------- 359 (427)
T 3ppl_A 294 KVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVP-------------- 359 (427)
T ss_dssp HHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECST--------------
T ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCc--------------
Confidence 4555555555543 33333332 23333344444443 3345665544344445554421
Q ss_pred CCccHHHHHHHHHHHhcCcEEEE-ecee-----CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 210 FGDNDLNKAVYDRIIARKVIYIV-KGSF-----QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 210 ~~~d~~n~~L~~~L~~~G~~~vs-~t~l-----~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
. + ..++.+.|.+.|.++.. .... .+..++|+++..+ ++++++.+++.|.++.+++.
T Consensus 360 -~-~--~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~--~~~~i~~~~~~l~~~l~~~~ 421 (427)
T 3ppl_A 360 -G-T--ASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLP--PVEELEVAMDGVATCVLLAA 421 (427)
T ss_dssp -T-C--HHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSS--CHHHHHHHHHHHHHHHHHHH
T ss_pred -c-h--HHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCC--CHHHHHHHHHHHHHHHHHHH
Confidence 1 1 24677888888875543 1111 2467899988554 88999999999998877654
No 386
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=97.16 E-value=0.00097 Score=73.77 Aligned_cols=148 Identities=13% Similarity=0.094 Sum_probs=90.0
Q ss_pred eeeeHHHHH----hhcCCCCCCeEEe-cCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc----
Q psy13453 20 LIYESFKAT----HSLSGTPDQVRLS-GLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS---- 90 (764)
Q Consensus 20 ~~YSv~KAa----~~LGl~~~~v~~V-pvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~---- 90 (764)
.|.+...++ ...|+.. +.+ |++ |+++|+++|+++ +-+++.+.++.++|.+.|++++++
T Consensus 106 ~~~~~~~~~~~~~~~~g~~~---~~~~~~~-----d~~~l~~~i~~~-----~~~v~~~~~~n~~G~~~~l~~i~~~a~~ 172 (421)
T 2ctz_A 106 LYGGTFNQFKVTLKRLGIEV---RFTSREE-----RPEEFLALTDEK-----TRAWWVESIGNPALNIPDLEALAQAARE 172 (421)
T ss_dssp CCHHHHHHHHTHHHHTTCEE---EECCTTC-----CHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHcCCEE---EEECCCC-----CHHHHHHhhccC-----CeEEEEECCCCCCCcccCHHHHHHHHHH
Confidence 455555554 6677765 777 665 899999999753 224457788889999999999886
Q ss_pred -CCCceecccc-cccc--------------------c------eeeeec-CCCcc----cccccc-ccccCCc-------
Q psy13453 91 -NGPLKVGGVL-RRVY--------------------S------SCLVPR-GQKSL----RTTVLF-HFLFQHW------- 129 (764)
Q Consensus 91 -~~wlHVDa~l-~~~y--------------------~------s~ll~r-d~~~l----~~~~s~-~~d~~d~------- 129 (764)
++++++|++. ...+ + ++++.+ +...+ ...+.. ...+...
T Consensus 173 ~g~~livD~~~~~~g~~~~~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~ 252 (421)
T 2ctz_A 173 KGVALIVDNTFGMGGYLLRPLAWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFG 252 (421)
T ss_dssp HTCEEEEECGGGGGGTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHG
T ss_pred cCCEEEEECCcccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcc
Confidence 8999999965 2111 0 122222 11100 000000 0000000
Q ss_pred -----------c-cCCCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeC
Q psy13453 130 -----------Q-IPLGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVC 182 (764)
Q Consensus 130 -----------t-le~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~ 182 (764)
. ...+-+...+..|+.++ |.+-+.+++++..++++++.+.|+++|+++.+.
T Consensus 253 ~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~--~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~ 315 (421)
T 2ctz_A 253 ELAFIVKARVDGLRDQGQALGPFEAWVVLL--GMETLSLRAERHVENTLHLAHWLLEQPQVAWVN 315 (421)
T ss_dssp GGHHHHHHHHTHHHHHCCCCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEE
T ss_pred hhHHHHHHHHHHHHhcCCCCCHHHHHHHHc--CcchHHHHHHHHHHhHHHHHHHHHhCCCeeEEE
Confidence 0 00122445556676655 344567788888999999999999999999875
No 387
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=97.14 E-value=0.0066 Score=66.80 Aligned_cols=214 Identities=9% Similarity=0.023 Sum_probs=109.0
Q ss_pred eEEecCCC-C----CcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc-----CCCceecccccccc
Q psy13453 38 VRLSGLPD-S----EWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS-----NGPLKVGGVLRRVY 104 (764)
Q Consensus 38 v~~Vpvd~-~----~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~-----~~wlHVDa~l~~~y 104 (764)
++.+|+|+ + +.+|+++|++++++... ++-+++-+.++.++|.+=| +.++++ ++++|+|......+
T Consensus 175 ~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~--~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~ 252 (444)
T 3if2_A 175 IDEVTHDGEEGFFKYRVDFEALENLPALKEG--RIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPF 252 (444)
T ss_dssp EEEEEETTEEEEEEEECCHHHHHTCHHHHTT--CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTT
T ss_pred EEecccccccCccccCCCHHHHHHHHHhcCC--CceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcc
Confidence 36677775 3 48999999999654211 2223345667889999877 555543 89999999753211
Q ss_pred ce--------------eeeecCCCccccccccccccCC---------cccCCCCcccHHHHHHHHHHccHHHHHH-----
Q psy13453 105 SS--------------CLVPRGQKSLRTTVLFHFLFQH---------WQIPLGRRFRALKLWMTLRSYGLKGLQA----- 156 (764)
Q Consensus 105 ~s--------------~ll~rd~~~l~~~~s~~~d~~d---------~tle~SRr~~ALklWatL~~lG~eGy~~----- 156 (764)
.+ +++..-.+.....+...+-..+ ..-..+.+...+..+++...+-...+.+
T Consensus 253 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 332 (444)
T 3if2_A 253 PNIIYSDAHLNWDNNTILCFSLSKIGLPGMRTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIKQLSDNE 332 (444)
T ss_dssp TCCBCSCCCCCCCTTEEEEEESTTTTCGGGCCEEEECCHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHT
T ss_pred cccccccccccCCCCEEEEechhhccCCCCceEEEEECHHHHHHHHHHHHhccCCCChHHHHHHHHHHHcCchhHHHHHH
Confidence 11 0011001111000000000000 0000001112222333222222222222
Q ss_pred HHHHHHHHHHHHHHHHhc-CC--CeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEe
Q psy13453 157 YLRKHISLAKKFADLVEQ-DD--RFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVK 233 (764)
Q Consensus 157 ~i~~~i~lA~~l~~~I~~-~p--~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~ 233 (764)
+.++..+..+++.+.+++ .+ ++++..+..-..+.+++... ..+ ..++.++|.+.|.++...
T Consensus 333 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~--------------~~~--~~~l~~~l~~~gi~v~~g 396 (444)
T 3if2_A 333 IKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDL--------------PIS--TLDLYERLKAKGTLIVPS 396 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTC--------------SSC--HHHHHHHHHHTTEECEEG
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCC--------------CCC--HHHHHHHHHHCCeEEecc
Confidence 222334455566666655 44 35655443333444444210 111 246778888889765543
Q ss_pred cee--C--------CeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 234 GSF--Q--------DRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 234 t~l--~--------g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
... . +..++|+++.. ++++++.+++.|.++.+++.+
T Consensus 397 ~~~~~~~~~~~~~~~~~~iRis~~~---~~e~i~~~l~~l~~~~~~~~~ 442 (444)
T 3if2_A 397 EYFFPGVDVSDYQHAHECIRMSIAA---DEQTLIDGIKVIGEVVRELYD 442 (444)
T ss_dssp GGSCTTCCCTTCSGGGSEEEEESSS---CHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhcCCCCCcccccCCCeEEEEEeC---CHHHHHHHHHHHHHHHHHHHc
Confidence 322 1 13589998875 899999999999999887764
No 388
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=97.07 E-value=0.0026 Score=69.46 Aligned_cols=219 Identities=8% Similarity=-0.058 Sum_probs=124.2
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC-CCCcccHHHHHHHHHHHhhCCCCc-EEEEeeC-CcccccccCchhhh---c---
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP-DSEWLAYLTLRTIYESFRKSFLCP-MCSGYCG-RTLHQDIQSLNAPV---S--- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd-~~~rmD~~aLe~~I~~~~~~G~~p-~~VatAG-TT~~G~iDpi~~ia---~--- 90 (764)
.+.+...++...|... +.+|++ +++.+|+++|+++|++....+ +. +++-+.+ ..++|.+=|.+++. +
T Consensus 135 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~d~~~l~~~l~~~~~~~-~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~ 210 (418)
T 3rq1_A 135 YWGAYRVICSDTGRTL---VTYSLFDEHNNFNHEAFQNRVNELAAKQ-TNVVVIFNTPGNNPTGYSIEDKDWDSILNFLK 210 (418)
T ss_dssp CCTHHHHHHHHTTCEE---EEECSBCTTSSBCHHHHHHHHHHHHHHC-SEEEEEEECSSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CchhHHHHHHHcCCEE---EEEeeeCCCCCcCHHHHHHHHHHhhccC-CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 3456778899999877 999995 568999999999998743222 23 3455556 89999998876633 2
Q ss_pred --------CCCceeccccccc-cc-----e--------------eeeecCCCccc-cccccccccC---Cc---------
Q psy13453 91 --------NGPLKVGGVLRRV-YS-----S--------------CLVPRGQKSLR-TTVLFHFLFQ---HW--------- 129 (764)
Q Consensus 91 --------~~wlHVDa~l~~~-y~-----s--------------~ll~rd~~~l~-~~~s~~~d~~---d~--------- 129 (764)
++++.+|.+.... +. + +++..-.+.+- ..+...+-.. +.
T Consensus 211 ~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 290 (418)
T 3rq1_A 211 DLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEV 290 (418)
T ss_dssp HHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHH
T ss_pred HhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHH
Confidence 6788999864111 10 0 01101111110 0000000000 00
Q ss_pred ---ccCCC-CcccHHHHHHHHHHccHH----HHH----HHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccc
Q psy13453 130 ---QIPLG-RRFRALKLWMTLRSYGLK----GLQ----AYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRF 197 (764)
Q Consensus 130 ---tle~S-Rr~~ALklWatL~~lG~e----Gy~----~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~ 197 (764)
...++ -....+..++....+... .|. ++.++.-+..+++.+.+++. ++++. +|+-+...|--.+
T Consensus 291 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~-- 366 (418)
T 3rq1_A 291 NKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV-GLPML-PYRGGFFITIPTD-- 366 (418)
T ss_dssp HHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCC-CCCSSSEEEEECT--
T ss_pred HHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCC-CCCceEEEEcCCC--
Confidence 00000 012233334444444322 132 34455566777888888876 77654 5555555542110
Q ss_pred cccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 198 WDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 198 ~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
+ ..++.+.|.+.|.++... ..++|++++ .+++++++.+++.|+++.+++
T Consensus 367 -------------~----~~~~~~~l~~~gi~v~~g-----~~~iRis~~--~~~~~~i~~~~~~l~~~l~~~ 415 (418)
T 3rq1_A 367 -------------S----ANAICEELKKEHIYVIAL-----ANGIRIAAC--GIPKCQMTGLAEKIYNAMKSL 415 (418)
T ss_dssp -------------T----HHHHHHHHHHTTEECEEC-----SSEEEEEGG--GSCHHHHTTHHHHHHHHHHHT
T ss_pred -------------C----HHHHHHHHHhCCEEEecC-----CCCeEEEEe--cCCHHHHHHHHHHHHHHHHHH
Confidence 1 135677888888755432 356999866 458899999999999887654
No 389
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=97.07 E-value=0.00084 Score=72.91 Aligned_cols=210 Identities=10% Similarity=0.010 Sum_probs=118.6
Q ss_pred eeeeHHHHHhhcCCC---------CCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCccccc----ccCch
Q psy13453 20 LIYESFKATHSLSGT---------PDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQD----IQSLN 86 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~---------~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~----iDpi~ 86 (764)
.|-+...++.+.|.. ...++.+|.+ |+++|+++|++. +-+++.+-++.++|. .++++
T Consensus 138 yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~-----d~~~l~~~l~~~-----~~~v~~~~~~nptG~~~~~~~~l~ 207 (397)
T 2ord_A 138 FHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFN-----NVEDLRRKMSED-----VCAVFLEPIQGESGIVPATKEFLE 207 (397)
T ss_dssp CCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECTT-----CHHHHHHHCCTT-----EEEEEECSEECTTTCEECCHHHHH
T ss_pred cCCCchhhhhccCChhhccccCCCCCCeeEecCC-----CHHHHHHHhhcC-----eEEEEEecccCCCCcccCCHHHHH
Confidence 455556677777754 1235777764 899999988642 224455568889998 37888
Q ss_pred hhhc-----CCCceeccccccc-cc-------------eeeeecCCCccccccccc-----cccCCcccC---CCC--cc
Q psy13453 87 APVS-----NGPLKVGGVLRRV-YS-------------SCLVPRGQKSLRTTVLFH-----FLFQHWQIP---LGR--RF 137 (764)
Q Consensus 87 ~ia~-----~~wlHVDa~l~~~-y~-------------s~ll~rd~~~l~~~~s~~-----~d~~d~tle---~SR--r~ 137 (764)
++++ ++++++|.+.... +. .++.+ .+.+..-+... .+.. .+. .+. ..
T Consensus 208 ~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~s~--sK~~~~G~r~G~~~~~~~~~--~l~~~~~~~~~~~ 283 (397)
T 2ord_A 208 EARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVLTT--AKGLGGGVPIGAVIVNERAN--VLEPGDHGTTFGG 283 (397)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEE--CGGGGTTSCCEEEEECSTTC--CCCTTSSCCSSTT
T ss_pred HHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCeeee--ccccCCCcCeEEEEEchHhc--ccCCCCcCCCCCC
Confidence 8775 8999999965311 10 01111 11111000000 0111 111 011 22
Q ss_pred cHHHH---HHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEeCCCCceeEEEEeeccccccccccccCccC
Q psy13453 138 RALKL---WMTLRSYGLKGLQAYLRKHISLAKKFADLVEQD----DRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISF 210 (764)
Q Consensus 138 ~ALkl---WatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~----p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~ 210 (764)
..+.. .++|+.+.. .++.++..++++++.+.|++. +.+.. .++.-+++.|++..
T Consensus 284 ~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~g~~~~~~~~~--------------- 344 (397)
T 2ord_A 284 NPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEYDVVAD-VRGMGLMIGIQFRE--------------- 344 (397)
T ss_dssp CHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEE-EEEETTEEEEEECT---------------
T ss_pred CHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCceEE-EEEEeEEEEEEECC---------------
Confidence 33433 444554443 356677777888888888764 32221 23344566665531
Q ss_pred CccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 211 GDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 211 ~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
..+ ..++.++|.+.|...... +..++|+++ ...+++++++.+++.|+++.++
T Consensus 345 ~~~--~~~l~~~l~~~gi~v~~~----~~~~iRis~-~~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 345 EVS--NREVATKCFENKLLVVPA----GNNTIRFLP-PLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp TSC--HHHHHHHHHHTTEECEEE----TTTEEEECC-CTTCCHHHHHHHHHHHHHHHHT
T ss_pred hHH--HHHHHHHHHHCCCEEccC----CCCEEEEEC-CcCCCHHHHHHHHHHHHHHHhh
Confidence 001 246788888888754332 356899975 3467899999999999887643
No 390
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=97.06 E-value=0.0059 Score=73.70 Aligned_cols=176 Identities=14% Similarity=-0.029 Sum_probs=91.7
Q ss_pred HHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCC-CCCccccccCceEEEecCCcchhH
Q psy13453 566 LVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKN-PSLTENDIRNKLVAYTSDQSNSSV 644 (764)
Q Consensus 566 ~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~-~~~~~~~~~~~~vi~~S~~aH~Sv 644 (764)
++.+.|+++++-+. ....+|+++|||||-.|+++|+.++....+... ++ .++..+.-+|.....-|-+.
T Consensus 428 ~Lae~L~~~~p~~~--------l~~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~~~--~~~~~r~~iI~~~~syHG~T 497 (831)
T 4a0g_A 428 KCAELLLDGVGKGW--------ASRVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATE--EEKHIVVKVIALRGSYHGDT 497 (831)
T ss_dssp HHHHHHHHTTTTTT--------CCEEEEESSHHHHHHHHHHHHHHHHHHTTTC-----------CCEEEEEETTCCCCSS
T ss_pred HHHHHHHHhCCCCC--------CCEEEECCChhHHHHHHHHHHHHHHHhhcCCCcccc--ccccCccEEEEecCCcccCc
Confidence 45566777765220 024689999999999999999543322211100 00 00001123555667778777
Q ss_pred HHHHHhCCCc----------------------------eEEEecCCCCc---------cc------------------HH
Q psy13453 645 EKSAIIGDVP----------------------------VRQLRSDDNGV---------LR------------------GD 669 (764)
Q Consensus 645 ~kAa~~lGl~----------------------------v~~Vp~d~~g~---------md------------------~~ 669 (764)
.-++.+.|.. +..+++....+ -+ .+
T Consensus 498 ~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (831)
T 4a0g_A 498 LGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSA 577 (831)
T ss_dssp HHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHH
T ss_pred eeeeeccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHH
Confidence 7777765531 11222211000 01 25
Q ss_pred HHHHHHHHhh--hcCCCceEEEEeec--cCCcccccc----HHHHHHHHHhcCCEEEEeccccccccccchhhhhhcCCC
Q psy13453 670 ALLTAVKEDL--AKGLIPCCLIATLG--TTGTCAFDN----LEELGPICQEYNIWLHVDAAYAGSALLLPEYAHLKRGLE 741 (764)
Q Consensus 670 ~Le~~I~~~~--~~G~~p~~VvataG--TT~~GaiDp----l~eIa~i~~~~glwLHVDaA~Gg~~l~~~~~r~~l~gie 741 (764)
+|++.|++.. ..+..+.+|+ .=+ ....|.+-+ +++|+++|++||++|++|-++.|+-..-..+.....|+
T Consensus 578 ~le~~l~~~~~~~~~~~iaavi-~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv- 655 (831)
T 4a0g_A 578 YLSKHLQEHSGVRQSAHVGALI-IEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGC- 655 (831)
T ss_dssp HHHHHC---------CEEEEEE-ECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSS-
T ss_pred HHHHHHHhhhhhcCCCcEEEEE-EecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCC-
Confidence 6777765421 1122333333 222 233455544 99999999999999999988776422222222222355
Q ss_pred cccEEEEcCCccCC
Q psy13453 742 YVDSFDFNTHKWLL 755 (764)
Q Consensus 742 ~aDSit~d~HK~l~ 755 (764)
..|.+| +-|.++
T Consensus 656 ~PDiit--lsK~L~ 667 (831)
T 4a0g_A 656 KPDIAC--FAKLLT 667 (831)
T ss_dssp CCSEEE--ECGGGG
T ss_pred CCcEEE--Eecccc
Confidence 468776 457764
No 391
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=97.04 E-value=0.019 Score=62.57 Aligned_cols=234 Identities=12% Similarity=-0.011 Sum_probs=122.3
Q ss_pred eeeeHHHHHhhcCCC----------CCCeEEecCCC-----CCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCccccccc
Q psy13453 20 LIYESFKATHSLSGT----------PDQVRLSGLPD-----SEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQ 83 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~----------~~~v~~Vpvd~-----~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iD 83 (764)
.|-+...++.+.|.. ...++.||++. ++.+|+++|+++|++.. .+..+-+ +.+.-..++|.+-
T Consensus 138 y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~v~~~p~~~ntG~~~ 216 (426)
T 1sff_A 138 YHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDA-APEDIAAIVIEPVQGEGGFYA 216 (426)
T ss_dssp CCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTC-CGGGEEEEEECSBCTTTTSCB
T ss_pred cCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhcc-CCCceEEEEEecccCCCCccc
Confidence 444455666666653 12478899874 34689999999997521 0112333 3433223389655
Q ss_pred C----chhhhc-----CCCceeccccccc-cce-ee---eec-CCC--cccccccc----cc--------c-cCCcccCC
Q psy13453 84 S----LNAPVS-----NGPLKVGGVLRRV-YSS-CL---VPR-GQK--SLRTTVLF----HF--------L-FQHWQIPL 133 (764)
Q Consensus 84 p----i~~ia~-----~~wlHVDa~l~~~-y~s-~l---l~r-d~~--~l~~~~s~----~~--------d-~~d~tle~ 133 (764)
| ++++++ ++++++|...... +.+ .. ... ..+ ++...+.. .+ + +.......
T Consensus 217 ~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~GlriG~~~~~~~~~~~l~~~~~~~ 296 (426)
T 1sff_A 217 SSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGG 296 (426)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEEECGGGGTSSCCEEEEEEHHHHTTSCTTSBCC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCCCCCEEEEcccccCCCceEEEEEcHHHHhhhccCCcCc
Confidence 5 666655 8999999965311 100 00 000 000 01111110 00 0 11001111
Q ss_pred CCcccHH---HHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEeCCCCceeEEEEeecccccccccccc
Q psy13453 134 GRRFRAL---KLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQ----DDRFELVCPPSMGLVCFRLKVRFWDKLDNLFG 206 (764)
Q Consensus 134 SRr~~AL---klWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~----~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~ 206 (764)
+-....+ .+.++|+.+..+ +..++..++.+++.+.+++ .+.+.. .+|.-+.+.|++.+....
T Consensus 297 ~~~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~------- 365 (426)
T 1sff_A 297 TYAGNPIACVAALEVLKVFEQE---NLLQKANDLGQKLKDGLLAIAEKHPEIGD-VRGLGAMIAIELFEDGDH------- 365 (426)
T ss_dssp SSSSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHTCTTEEE-EEEETTEEEEEEBGGGCT-------
T ss_pred CCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEE-EEEEEEEEEEEEecCccc-------
Confidence 2223334 345555665444 3455666677777777765 443332 234455666766421000
Q ss_pred CccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 207 TISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 207 ~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
......-..++.++|.++|.++..... ...++|+++ ...+++++++.+++.|+++.+++
T Consensus 366 --~~~~~~~~~~l~~~l~~~gi~v~~~~~--~~~~iRi~~-~~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 366 --NKPDAKLTAEIVARARDKGLILLSCGP--YYNVLRILV-PLTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp --TSBCHHHHHHHHHHHHHTTEECEEEST--TSCEEEECC-CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred --cCCChHHHHHHHHHHHHCCcEEecCCC--CCCEEEEEC-CccCCHHHHHHHHHHHHHHHHHH
Confidence 000111235788889889875544332 346899964 34678999999999999887664
No 392
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=97.04 E-value=0.007 Score=66.40 Aligned_cols=219 Identities=9% Similarity=-0.000 Sum_probs=127.5
Q ss_pred eeeeHHHHHhh-cCCCCCCeEEecCCC-CCcccHHHHHHHHHHHhhCCCCc-EEEEeeCCcccccccC---chhhhc---
Q psy13453 20 LIYESFKATHS-LSGTPDQVRLSGLPD-SEWLAYLTLRTIYESFRKSFLCP-MCSGYCGRTLHQDIQS---LNAPVS--- 90 (764)
Q Consensus 20 ~~YSv~KAa~~-LGl~~~~v~~Vpvd~-~~rmD~~aLe~~I~~~~~~G~~p-~~VatAGTT~~G~iDp---i~~ia~--- 90 (764)
.+.++..++.. .|... +.+|+++ ++.+|+++|+++|++. +..+ +++-+.++.++|.+=| ++++++
T Consensus 146 ~y~~~~~~~~~~~g~~~---~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~ 219 (430)
T 2x5f_A 146 NWGNYKLVFNTRNGANL---QTYPIFDKDGHYTTDSLVEALQSY---NKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIK 219 (430)
T ss_dssp CCTHHHHHHTTTTCCEE---EEECCBCTTSCBCSHHHHHHHHHC---CSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHH
T ss_pred cCccHHHHHHHhcCCeE---EEEeccCccCCcCHHHHHHHHHhc---CCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHH
Confidence 45677788888 88766 8899975 5789999999999862 1123 3455677999999877 555542
Q ss_pred -------CCCceeccccccc-cc-----eee-ee-c-CCC--------ccccccc-----cccccC---Cccc-------
Q psy13453 91 -------NGPLKVGGVLRRV-YS-----SCL-VP-R-GQK--------SLRTTVL-----FHFLFQ---HWQI------- 131 (764)
Q Consensus 91 -------~~wlHVDa~l~~~-y~-----s~l-l~-r-d~~--------~l~~~~s-----~~~d~~---d~tl------- 131 (764)
++++++|...... |. ++. -+ . ... ++...|. ..+-+. +..+
T Consensus 220 ~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~ 299 (430)
T 2x5f_A 220 ALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAK 299 (430)
T ss_dssp HHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHH
T ss_pred hhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHHHHHHH
Confidence 5688999864211 11 111 00 0 001 0000110 000011 1000
Q ss_pred --C----CCCcccHHHHHHHHHHcc-H----HHHHHHHHHHHHHHHHHHHHHh----cCCCeEEeCCCCcee-EEEEeec
Q psy13453 132 --P----LGRRFRALKLWMTLRSYG-L----KGLQAYLRKHISLAKKFADLVE----QDDRFELVCPPSMGL-VCFRLKV 195 (764)
Q Consensus 132 --e----~SRr~~ALklWatL~~lG-~----eGy~~~i~~~i~lA~~l~~~I~----~~p~~ell~~P~l~i-V~Fry~P 195 (764)
. .+-....+..+++...+- . +.+.++.++..+..+++.+.|+ +. ++++. .|+.+. +.+++.
T Consensus 300 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-g~~~~-~~~~g~~~~~~~~- 376 (430)
T 2x5f_A 300 VKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHS-HWQAY-DFNSGYFMAIKVH- 376 (430)
T ss_dssp HHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTT-TEEEC-CCCBSSEEEEEES-
T ss_pred HhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-Cceee-CCCceEEEEeCCC-
Confidence 0 111234444455544443 2 2223356666777888999998 43 68765 455554 445442
Q ss_pred cccccccccccCccCCccHHHHHHHHHHHh-cCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 196 RFWDKLDNLFGTISFGDNDLNKAVYDRIIA-RKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 196 ~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~-~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
+ .+ ..++.++|.+ .|..+... +..++|+++.. +++++++.+++.|+++.+++
T Consensus 377 -~--------------~~--~~~~~~~l~~~~gi~v~~g----~~~~iRis~~~--~~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 377 -D--------------VD--PEALRKHLIDKYSIGVIAL----NATDIRIAFSC--VEKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp -S--------------SC--HHHHHHHHHHHHCEECEEC----SSSEEEEEGGG--SCGGGHHHHHHHHHHHHHHH
T ss_pred -C--------------CC--HHHHHHHHHHhCCEEEecC----CCCeEEEEEec--CCHHHHHHHHHHHHHHHHhc
Confidence 1 01 2467888887 78754432 45689999874 48889999999999887654
No 393
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=97.01 E-value=0.0037 Score=66.44 Aligned_cols=209 Identities=11% Similarity=0.059 Sum_probs=123.8
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecC-CCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc------CC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGL-PDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS------NG 92 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpv-d~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~------~~ 92 (764)
.+.++..++..+|... +.||+ ++...+++ . ++-+++-+.++.++|.+=|++++.+ ..
T Consensus 98 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~~--------~-----~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~ 161 (350)
T 3fkd_A 98 SFAEYEDACRMYEHEV---CFYPSNEDIGEADF--------S-----NMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDT 161 (350)
T ss_dssp CCHHHHHHHHHTTCEE---EEEETTSCGGGSCC--------T-----TCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTS
T ss_pred CcHHHHHHHHHcCCeE---EEEecCCccccCcc--------C-----CCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCC
Confidence 4567788999999877 99999 76566666 1 1234545788999999988877654 35
Q ss_pred Cceeccccccc-c-ce------------eeeecCCCccc-cccccccccCCc-------ccCCCCcccHHHHHHHHHHcc
Q psy13453 93 PLKVGGVLRRV-Y-SS------------CLVPRGQKSLR-TTVLFHFLFQHW-------QIPLGRRFRALKLWMTLRSYG 150 (764)
Q Consensus 93 wlHVDa~l~~~-y-~s------------~ll~rd~~~l~-~~~s~~~d~~d~-------tle~SRr~~ALklWatL~~lG 150 (764)
++.+|.+.... + .. +++..-.+.+- ..+...+-..+. ....+-....+..+++...+-
T Consensus 162 ~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 241 (350)
T 3fkd_A 162 TFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFSTPWAVNALAIEAAKFILI 241 (350)
T ss_dssp EEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTCCTTCSCHHHHHHHHHHHH
T ss_pred EEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhCCCCCCCHHHHHHHHHHHh
Confidence 88888864211 0 00 00000001000 000000000000 000011334555565555543
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHh-cCc
Q psy13453 151 LKG-LQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIA-RKV 228 (764)
Q Consensus 151 ~eG-y~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~-~G~ 228 (764)
... |.+.+++..+.++++.+.|+++|++++. ++..+.+.++... . + ..++.++|.+ .|.
T Consensus 242 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~---------------~-~--~~~l~~~L~~~~gi 302 (350)
T 3fkd_A 242 HPAQFTLPIRKWQRNTVDFITALNRLDGVEVH-PSGTTFFLLRLKK---------------G-T--AAELKKYMLEEYNM 302 (350)
T ss_dssp CTTTTCCCHHHHHHHHHHHHHHHHHSTTEEEC-CCSSSEEEEEESS---------------S-C--HHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEC-CCCCcEEEEECCC---------------C-C--HHHHHHHHHHHCCE
Confidence 333 6666777779999999999999999974 5555666565531 1 1 2468888888 887
Q ss_pred EEEEeceeC--CeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 229 IYIVKGSFQ--DRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 229 ~~vs~t~l~--g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
......... +..++|+++. ++++++.+++.|+++.
T Consensus 303 ~v~~g~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~~ 339 (350)
T 3fkd_A 303 LIRDASNFRGLDESYVRITTQ----RPAQNQLFIKALETFL 339 (350)
T ss_dssp ECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHH
T ss_pred EEEeCccCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHH
Confidence 655443332 3578999865 6788999998888765
No 394
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=97.00 E-value=0.0035 Score=67.15 Aligned_cols=210 Identities=10% Similarity=-0.031 Sum_probs=121.7
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc-----C
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS-----N 91 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~-----~ 91 (764)
.|.++..++...|... +.+|+++++.+++ +|++++.+.. -+++-+.++.++|.+=| +.++++ +
T Consensus 117 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~-~l~~~~~~~~-----~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~ 187 (376)
T 3ezs_A 117 FYQIYEGAAKFIKAKS---LLMPLTKENDFTP-SLNEKELQEV-----DLVILNSPNNPTGRTLSLEELISWVKLALKHD 187 (376)
T ss_dssp CCTHHHHHHHHTTCEE---EEEECCGGGTSCC-CCCHHHHHHC-----SEEEECSSCTTTCCCCCHHHHHHHHHHHHHHT
T ss_pred CcHhHHHHHHHcCCEE---EEcccCCCCCcch-hHHhhhccCC-----CEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcC
Confidence 4667888999999877 9999987666777 8888887642 24544578999999866 444533 8
Q ss_pred CCceeccccccc-cc----e----------------eeeecCCCccc-ccccccc-----c----cCCcccCCCCcccHH
Q psy13453 92 GPLKVGGVLRRV-YS----S----------------CLVPRGQKSLR-TTVLFHF-----L----FQHWQIPLGRRFRAL 140 (764)
Q Consensus 92 ~wlHVDa~l~~~-y~----s----------------~ll~rd~~~l~-~~~s~~~-----d----~~d~tle~SRr~~AL 140 (764)
+++++|.+.... +. + +++..-.+.+- ..+...+ + +....-..+-....+
T Consensus 188 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (376)
T 3ezs_A 188 FILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKAFRAYLGYTSANA 267 (376)
T ss_dssp CEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHTTTCCCCCHH
T ss_pred cEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCHHHHHHHHHHHhhhcCCCChH
Confidence 999999964321 10 0 11111111110 0000000 0 000000011123334
Q ss_pred HHHHHHHHcc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEE-EEeeccccccccccccCccCCccHHHHH
Q psy13453 141 KLWMTLRSYG-LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVC-FRLKVRFWDKLDNLFGTISFGDNDLNKA 218 (764)
Q Consensus 141 klWatL~~lG-~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~-Fry~P~~~~~~~~~~~~~~~~~d~~n~~ 218 (764)
..++....+- .+.+.++.++..+..+++.+.++ ++. .|.-+... +++. + ..+
T Consensus 268 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~---~~~---~~~~~~~~~~~~~------------------~--~~~ 321 (376)
T 3ezs_A 268 IQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK---NTL---IYPYSFYVYLPVQ------------------N--GEN 321 (376)
T ss_dssp HHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST---TCC---CCSBSSEEEEECS------------------C--HHH
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc---CCC---CCCcceEEEEECC------------------C--HHH
Confidence 3444333332 33467777778888888888887 444 44444333 3321 0 246
Q ss_pred HHHHHHh-cCcEEEEecee----CCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 219 VYDRIIA-RKVIYIVKGSF----QDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 219 L~~~L~~-~G~~~vs~t~l----~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
+.++|.+ .|..+...... .+..++|+++.. ++++++.+++.|+++.
T Consensus 322 ~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~---~~~~i~~~l~~l~~~l 372 (376)
T 3ezs_A 322 FAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY---DTPLLEKPLEIIETYR 372 (376)
T ss_dssp HHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS---CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC---CHHHHHHHHHHHHHHH
Confidence 7777877 78765543332 245789998763 8999999999998765
No 395
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=96.96 E-value=0.0075 Score=66.20 Aligned_cols=225 Identities=10% Similarity=-0.004 Sum_probs=123.0
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEE-EeeCCcccccccCch---hhhc-----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCS-GYCGRTLHQDIQSLN---APVS----- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~V-atAGTT~~G~iDpi~---~ia~----- 90 (764)
.+.+...+++..|... +.||+++++ +|+++|+++|++. ++-+++ -..+..++|.+=|.+ ++++
T Consensus 140 ~y~~~~~~~~~~g~~~---~~v~~~~~g-~d~~~l~~~l~~~----~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~ 211 (422)
T 3d6k_A 140 GYDRHFTITEHFGFEM---INVPMTDEG-PDMGVVRELVKDP----QVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAA 211 (422)
T ss_dssp CCHHHHHHHHHHTCEE---EEEEEETTE-ECHHHHHHHHTST----TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSS
T ss_pred ccHHHHHHHHHcCCEE---EecCCCCCC-CCHHHHHHHHhcC----CCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhc
Confidence 4566778888999876 899998776 9999999999641 112344 456888999987766 4432
Q ss_pred -CCCceecccccc--c-cc-----eeee------ecCCCccccccc--------cccccCCc---------ccCCCCccc
Q psy13453 91 -NGPLKVGGVLRR--V-YS-----SCLV------PRGQKSLRTTVL--------FHFLFQHW---------QIPLGRRFR 138 (764)
Q Consensus 91 -~~wlHVDa~l~~--~-y~-----s~ll------~rd~~~l~~~~s--------~~~d~~d~---------tle~SRr~~ 138 (764)
++++++|..... . +. +++- ..+....-.+|+ ..+-+... .-..+-...
T Consensus 212 ~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~~l~~~l~~~~~~~~~~~~ 291 (422)
T 3d6k_A 212 PDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSKENIEWYASHANVRGIGPN 291 (422)
T ss_dssp TTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCHHHHHHHHHHHHHHCSCCC
T ss_pred cCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeCHHHHHHHHHHHHhhcCCCC
Confidence 678899986531 1 11 1100 000000000010 00000000 000011233
Q ss_pred HHHHHHHHHHccH-HHHHHHHHHH----HHHHHHHHHHHhc----CCCeEEeCCCCceeEEEEeeccccccccccccCcc
Q psy13453 139 ALKLWMTLRSYGL-KGLQAYLRKH----ISLAKKFADLVEQ----DDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTIS 209 (764)
Q Consensus 139 ALklWatL~~lG~-eGy~~~i~~~----i~lA~~l~~~I~~----~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~ 209 (764)
.+..+++...+-. ..+.+.+++. -+..+++.+.|++ .+++++..+..-..+.+++..
T Consensus 292 ~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~-------------- 357 (422)
T 3d6k_A 292 KLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVP-------------- 357 (422)
T ss_dssp HHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEEST--------------
T ss_pred HHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCC--------------
Confidence 4555555555544 3333333332 2344455555543 344665443333344554421
Q ss_pred CCccHHHHHHHHHHHhcCcEEEE-ecee-----CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 210 FGDNDLNKAVYDRIIARKVIYIV-KGSF-----QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 210 ~~~d~~n~~L~~~L~~~G~~~vs-~t~l-----~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
. + ...+.+.|.+.|.++.. .... .+..++|+++.. +++++++.+++.|+++.+++..
T Consensus 358 -~-~--~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~--~~~e~i~~~~~~l~~~l~~~~~ 420 (422)
T 3d6k_A 358 -G-T--ASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSL--PPVAELEVAMDGFATCVLMAAL 420 (422)
T ss_dssp -T-C--HHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSS--SCHHHHHHHHHHHHHHHHHHHH
T ss_pred -C-C--HHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCC--CCHHHHHHHHHHHHHHHHHHHh
Confidence 1 1 24577788888875543 1212 135789998876 7899999999999998876643
No 396
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=96.96 E-value=0.0016 Score=72.46 Aligned_cols=232 Identities=8% Similarity=0.042 Sum_probs=123.3
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC------------CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc---cC
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD------------SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI---QS 84 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~------------~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i---Dp 84 (764)
.|.++..++...|... +.||+++ ++.+|+++|+++|++. +-+++-+.++.++|.+ ++
T Consensus 151 ~y~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~v~l~~p~nptG~~~~~~~ 222 (447)
T 3b46_A 151 FFDQYIPNIELCGGKV---VYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSK-----TKAVIINTPHNPIGKVFTREE 222 (447)
T ss_dssp CCTTHHHHHHHTTCEE---EEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTT-----EEEEEEESSCTTTCCCCCHHH
T ss_pred CchhHHHHHHHcCCEE---EEEeCCCccccccccccccCcccCHHHHHHhhccC-----CeEEEEeCCCCCCCcccCHHH
Confidence 4567788889999866 8899864 4689999999998632 2244456788999998 67
Q ss_pred chhhhc-----CCCceeccccccc-cc----eeeee----cCCC----ccccccc-----cccccC-Cccc---------
Q psy13453 85 LNAPVS-----NGPLKVGGVLRRV-YS----SCLVP----RGQK----SLRTTVL-----FHFLFQ-HWQI--------- 131 (764)
Q Consensus 85 i~~ia~-----~~wlHVDa~l~~~-y~----s~ll~----rd~~----~l~~~~s-----~~~d~~-d~tl--------- 131 (764)
++++++ ++++++|...... |+ ++.-+ .+.. ++...|. ..+-.. +..+
T Consensus 223 l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l~~~l~~~~~ 302 (447)
T 3b46_A 223 LTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAELLSYAAKAHT 302 (447)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHHHHHHHHHHh
Confidence 777765 8899999865321 11 10000 0000 0000000 000000 0000
Q ss_pred CCCCcccHHHHHH---HHHHcc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccC
Q psy13453 132 PLGRRFRALKLWM---TLRSYG-LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGT 207 (764)
Q Consensus 132 e~SRr~~ALklWa---tL~~lG-~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~ 207 (764)
..+-....+..++ +|.... .+.+.++.++.-+..+++.+.|++. ++++..+..-..+.+++.............
T Consensus 303 ~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~p~~~~~~~- 380 (447)
T 3b46_A 303 RICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL-GLPYTAPEGTYFVLVDFSKVKIPEDYPYPE- 380 (447)
T ss_dssp HHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH-TCCEECCSBSSEEEEECTTCCCCTTCCCCG-
T ss_pred hccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEecccccCcccccccc-
Confidence 0000112222223 333222 2336667777888889999999886 777664332333444442100000000000
Q ss_pred ccCCccHHHHHHHHHHH-hcCcEEEEeceeC-------CeeEEEEeccCCCCCHHHHHHHHHHHHH
Q psy13453 208 ISFGDNDLNKAVYDRII-ARKVIYIVKGSFQ-------DRLFMRFAICSSQTEESDVQLGWNEIRT 265 (764)
Q Consensus 208 ~~~~~d~~n~~L~~~L~-~~G~~~vs~t~l~-------g~~~LRi~v~np~Tt~e~i~~~l~~l~~ 265 (764)
......-..++.++|. +.|.++....... +..++|++++. +++++++.++.|++
T Consensus 381 -~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~---~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 381 -EILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCK---DDAYLENAVERLKL 442 (447)
T ss_dssp -GGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCS---CHHHHHHHHHHGGG
T ss_pred -ccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeC---CHHHHHHHHHHHHH
Confidence 0000011256777776 4687544332221 24689999874 68899998888865
No 397
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=96.92 E-value=0.0018 Score=71.49 Aligned_cols=140 Identities=17% Similarity=0.103 Sum_probs=87.6
Q ss_pred cCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceecccccccc-
Q psy13453 31 LSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGGVLRRVY- 104 (764)
Q Consensus 31 LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa~l~~~y- 104 (764)
+|+.. +.||.+ |+++|+++|+++ +-+++...++.++|.+-|++++++ +++++||......+
T Consensus 130 ~g~~~---~~v~~~-----d~~~l~~~i~~~-----~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~ 196 (400)
T 3nmy_A 130 AGLDF---SFVDLT-----DPAAFKAAIRAD-----TKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPML 196 (400)
T ss_dssp HCCEE---EEECTT-----SHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHH
T ss_pred cCeEE---EEECCC-----CHHHHHHHhccC-----CCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc
Confidence 57765 777765 899999999753 224456778999999999999886 89999999542111
Q ss_pred ------c-eeeeecCCCcccc--------cccc-ccc----cCCcccCCCCcccHHHHHHHHHHccHHHHHHHHHHHHHH
Q psy13453 105 ------S-SCLVPRGQKSLRT--------TVLF-HFL----FQHWQIPLGRRFRALKLWMTLRSYGLKGLQAYLRKHISL 164 (764)
Q Consensus 105 ------~-s~ll~rd~~~l~~--------~~s~-~~d----~~d~tle~SRr~~ALklWatL~~lG~eGy~~~i~~~i~l 164 (764)
+ -+++..-.|.+.. .+.. ..+ +..+.-..+-....+..|+.++ |.+.+..++++..+.
T Consensus 197 ~~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~--~l~~l~~r~~~~~~~ 274 (400)
T 3nmy_A 197 QRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALR--GLKTLPLRMRAHCEN 274 (400)
T ss_dssp CCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHH--HHTTHHHHHHHHHHH
T ss_pred CChhhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHH--hHhHHHHHHHHHHHH
Confidence 0 1111111111110 0000 000 0000001122345567777776 456688899999999
Q ss_pred HHHHHHHHhcCCCeEEeCCCC
Q psy13453 165 AKKFADLVEQDDRFELVCPPS 185 (764)
Q Consensus 165 A~~l~~~I~~~p~~ell~~P~ 185 (764)
++++++.|+++|.++-+.-|.
T Consensus 275 a~~l~~~L~~~p~v~~V~~p~ 295 (400)
T 3nmy_A 275 ALALAQWLETHPAIEKVIYPG 295 (400)
T ss_dssp HHHHHHHHTTCTTEEEEECTT
T ss_pred HHHHHHHHHcCCCEeEEECCC
Confidence 999999999999988776554
No 398
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=96.85 E-value=0.0081 Score=63.52 Aligned_cols=203 Identities=5% Similarity=-0.029 Sum_probs=117.9
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCc
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPL 94 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wl 94 (764)
.+.++..++..+|... +.+|+++++.+|+++| + ++-+++-+.++.++|.+=|.+++.+ + ++
T Consensus 105 ~y~~~~~~~~~~g~~~---~~v~~~~~~~~d~~~l-----~-----~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~l 170 (335)
T 1uu1_A 105 TYSCYRIFAKAVGAKF---LEVPLTKDLRIPEVNV-----G-----EGDVVFIPNPNNPTGHVFEREEIERILKTGA-FV 170 (335)
T ss_dssp SCHHHHHHHHHHTCEE---EECCCCTTSCCCCCCC-----C-----TTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EE
T ss_pred CcHHHHHHHHHcCCeE---EEeccCCCCCCCHHHc-----C-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EE
Confidence 3556777888889876 8899988889999888 1 2224444667899999988777554 5 88
Q ss_pred eeccccccc-cce-----------eeeecCCCccc-cccccccccCCc-------ccCCCCcccHHHHHHHHHHcc-HHH
Q psy13453 95 KVGGVLRRV-YSS-----------CLVPRGQKSLR-TTVLFHFLFQHW-------QIPLGRRFRALKLWMTLRSYG-LKG 153 (764)
Q Consensus 95 HVDa~l~~~-y~s-----------~ll~rd~~~l~-~~~s~~~d~~d~-------tle~SRr~~ALklWatL~~lG-~eG 153 (764)
++|.+.... +.+ +++..-.+.+- .-+...+-+.+. ....+-....+..+++...+- .+.
T Consensus 171 i~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~ 250 (335)
T 1uu1_A 171 ALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREI 250 (335)
T ss_dssp EEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHSCTTCSCHHHHHHHHHHHHTHHH
T ss_pred EEECcchhhcchhHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCHHH
Confidence 999864210 000 11111111110 000000000000 000001233344444433332 246
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEe
Q psy13453 154 LQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVK 233 (764)
Q Consensus 154 y~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~ 233 (764)
+.++.++..+.++++.+.+++. ++++ .++..+.+.+++. . .-..++.++|.++|..+..
T Consensus 251 ~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~~----------------~--~~~~~~~~~l~~~gi~v~~- 309 (335)
T 1uu1_A 251 FEERTKFIVEERERMKSALREM-GYRI-TDSRGNFVFVFME----------------K--EEKERLLEHLRTKNVAVRS- 309 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TCCB-CCCCSSEEEEECC----------------T--HHHHHHHHHHHHHTEEEEE-
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CcEE-cCCCCeEEEEECC----------------C--CCHHHHHHHHHHCCEEEEE-
Confidence 7788888889999999999987 6764 3445555555432 1 0124678888888875443
Q ss_pred ceeCCeeEEEEeccCCCCCHHHHHHHHHHHHH
Q psy13453 234 GSFQDRLFMRFAICSSQTEESDVQLGWNEIRT 265 (764)
Q Consensus 234 t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~ 265 (764)
+..++|+++. ++++++.+++.|++
T Consensus 310 ----~~~~iRis~~----~~~~i~~~~~~l~~ 333 (335)
T 1uu1_A 310 ----FREGVRITIG----KREENDMILRELEV 333 (335)
T ss_dssp ----ETTEEEEECC----CHHHHHHHHHHHHC
T ss_pred ----CCCeEEEEeC----CHHHHHHHHHHHHh
Confidence 2357999874 35778888887764
No 399
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=96.84 E-value=0.012 Score=63.34 Aligned_cols=214 Identities=8% Similarity=0.057 Sum_probs=120.2
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC-CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchh---hhc-----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD-SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNA---PVS----- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~-~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~---ia~----- 90 (764)
.|.++..++..+|... +.||+++ .+.+|+++|+++|.+.. -+++-+.+..++|.+=|.++ +++
T Consensus 129 ~~~~~~~~~~~~g~~~---~~v~~~~~g~~~d~~~l~~~~~~~~-----~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~ 200 (396)
T 3jtx_A 129 FYQIYEGATLLGGGEI---HFANCPAPSFNPDWRSISEEVWKRT-----KLVFVCSPNNPSGSVLDLDGWKEVFDLQDKY 200 (396)
T ss_dssp CCHHHHHHHHHTTCEE---EEEECCTTTCCCCGGGSCHHHHHTE-----EEEEEESSCTTTCCCCCHHHHHHHHHHHHHH
T ss_pred CcHhHHHHHHHcCCEE---EEeecCCCCCccCHHHHHHhhccCc-----EEEEEECCCCCCCCcCCHHHHHHHHHHHHHc
Confidence 3456777889999877 9999965 45799999999998632 24444578899999966555 443
Q ss_pred CCCceeccccccc-cc-----e---------------eeeecCCCc--cccccccccccCC---------cccCCCCccc
Q psy13453 91 NGPLKVGGVLRRV-YS-----S---------------CLVPRGQKS--LRTTVLFHFLFQH---------WQIPLGRRFR 138 (764)
Q Consensus 91 ~~wlHVDa~l~~~-y~-----s---------------~ll~rd~~~--l~~~~s~~~d~~d---------~tle~SRr~~ 138 (764)
++++++|...... +. + +++..-.+. +.+ +...+-..+ .....+-...
T Consensus 201 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~ 279 (396)
T 3jtx_A 201 GFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPG-LRSGFVAGDAELLKNFLLYRTYHGSAMS 279 (396)
T ss_dssp CCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGG-GCCEEEEECHHHHHHHHHHHHHHTCCCC
T ss_pred CCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcc-cceEEEEeCHHHHHHHHHHHhhcccCCC
Confidence 8899999964321 10 0 000000010 000 000000000 0000001122
Q ss_pred HHHHHHHHHHcc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCcee-EEEEeeccccccccccccCccCCccHHH
Q psy13453 139 ALKLWMTLRSYG-LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGL-VCFRLKVRFWDKLDNLFGTISFGDNDLN 216 (764)
Q Consensus 139 ALklWatL~~lG-~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~i-V~Fry~P~~~~~~~~~~~~~~~~~d~~n 216 (764)
.+..+++...+- .+.+.++.++.-+..+++.+.+++. +.+ ..|.-+. +.+++. ..+ .
T Consensus 280 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~-~~~~~~~~~~~~~~----------------~~~--~ 338 (396)
T 3jtx_A 280 IPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQV--FDV-KLPDASFYIWLKVP----------------DGD--D 338 (396)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTT--SCC-CCCSSSSEEEEECT----------------TSC--H
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc--CCc-cCCCeeEEEEEECC----------------CCC--H
Confidence 233333332221 3556777777788888899999875 332 3444443 333331 001 2
Q ss_pred HHHHHHHHh-cCcEEEEecee--------CCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 217 KAVYDRIIA-RKVIYIVKGSF--------QDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 217 ~~L~~~L~~-~G~~~vs~t~l--------~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
.++.++|.+ .|..+...... .+..++|+++.. ++++++.+++.|.++
T Consensus 339 ~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~---~~~~i~~~l~~l~~~ 394 (396)
T 3jtx_A 339 LAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA---DVATCVKAAEDIVSL 394 (396)
T ss_dssp HHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC---CHHHHHHHHHHHHHH
Confidence 456677754 58755443322 235789998765 789999999988764
No 400
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=95.87 E-value=0.00018 Score=78.19 Aligned_cols=221 Identities=12% Similarity=0.007 Sum_probs=123.1
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC-C--CCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chhhhc---
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP-D--SEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNAPVS--- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd-~--~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ia~--- 90 (764)
.|.+...++..+|... +.+|++ + ++++|+++|+++|++.. +-+++-+.++.++|.+=| ++++++
T Consensus 122 ~~~~~~~~~~~~g~~~---~~~~~~~~~g~~~~d~~~l~~~l~~~~----~~~v~~~~~~nptG~~~~~~~l~~l~~~~~ 194 (392)
T 3b1d_A 122 VYPPFARSVRLNNRKL---VSNSLKEENGLFQIDFEQLENDIVEND----VKLYLLCNPHNPGGRVWEREVLEQIGHLCQ 194 (392)
Confidence 4567778888888877 888885 3 36799999999997321 123434677888998744 565554
Q ss_pred --CCCceeccccccc-c-----ceeeee-c---CC----Cccccccc-----ccc------ccCC----cccCCC-Cccc
Q psy13453 91 --NGPLKVGGVLRRV-Y-----SSCLVP-R---GQ----KSLRTTVL-----FHF------LFQH----WQIPLG-RRFR 138 (764)
Q Consensus 91 --~~wlHVDa~l~~~-y-----~s~ll~-r---d~----~~l~~~~s-----~~~------d~~d----~tle~S-Rr~~ 138 (764)
++++++|...... + .++.-+ . +. .++...+. ..+ ++.+ .....+ -...
T Consensus 195 ~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (392)
T 3b1d_A 195 KHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHHEVS 274 (392)
Confidence 7889999854211 1 011000 0 00 00111110 000 0000 000000 0112
Q ss_pred HHHHHHHHHHc--cHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEeCCCCceeEE-EEeeccccccccccccCccCCccH
Q psy13453 139 ALKLWMTLRSY--GLKGLQAYLRKHISLAKKFADLVEQ-DDRFELVCPPSMGLVC-FRLKVRFWDKLDNLFGTISFGDND 214 (764)
Q Consensus 139 ALklWatL~~l--G~eGy~~~i~~~i~lA~~l~~~I~~-~p~~ell~~P~l~iV~-Fry~P~~~~~~~~~~~~~~~~~d~ 214 (764)
.+..+++...+ +.+.+.++.++..+..+++.+.+++ .|++++. .|+-+.+. +++...+ .
T Consensus 275 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~i~~~~~~--------------~-- 337 (392)
T 3b1d_A 275 SLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVM-KPQGTYLIWLDFSDYG--------------L-- 337 (392)
Confidence 33344333333 4556777777788888899999988 7888764 45555444 3332100 0
Q ss_pred HHHHHHHHHH-hcCcEEEEecee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 215 LNKAVYDRII-ARKVIYIVKGSF--QDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 215 ~n~~L~~~L~-~~G~~~vs~t~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
-..++.++|. +.|..+...... .+..++|++++. +++++++.++.|+++.
T Consensus 338 ~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~---~~e~i~~~l~~l~~~l 390 (392)
T 3b1d_A 338 TDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAA---PKSLVEEICKRIVCCL 390 (392)
Confidence 1235677775 567755433222 245789998765 3678888888887653
No 401
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=96.81 E-value=0.01 Score=64.20 Aligned_cols=209 Identities=10% Similarity=-0.051 Sum_probs=113.6
Q ss_pred eeeeHHHHHhhcCCCC---------CCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC----ch
Q psy13453 20 LIYESFKATHSLSGTP---------DQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS----LN 86 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~---------~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp----i~ 86 (764)
.|.+...++.+.|... ..++.+|. .|+++|+++|++. +-+++.+....++|.+-| ++
T Consensus 140 y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~~~-----~~~v~~~~~~~~tG~~~~~~~~l~ 209 (395)
T 1vef_A 140 FSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-----NDVEALKRAVDEE-----TAAVILEPVQGEGGVRPATPEFLR 209 (395)
T ss_dssp CCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-----TCHHHHHHHCCTT-----EEEEEECSEETTTTSEECCHHHHH
T ss_pred cCCCchhhhhhcCCcccccccCCCCCCeeEeCC-----CcHHHHHHHhccC-----EEEEEEeCccCCCCccCCCHHHHH
Confidence 4445556677666541 11333433 4899999998642 223345555667998766 77
Q ss_pred hhhc-----CCCceeccccccc-c-ce---eeee---cCCCcccccccc----c--------cc-cCCcccCCCCcccHH
Q psy13453 87 APVS-----NGPLKVGGVLRRV-Y-SS---CLVP---RGQKSLRTTVLF----H--------FL-FQHWQIPLGRRFRAL 140 (764)
Q Consensus 87 ~ia~-----~~wlHVDa~l~~~-y-~s---~ll~---rd~~~l~~~~s~----~--------~d-~~d~tle~SRr~~AL 140 (764)
++++ ++++++|++.... + +. +-.. .|--++...+.. . .+ +.......+-....+
T Consensus 210 ~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~g~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~ 289 (395)
T 1vef_A 210 AAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDILTLAKALGGGVPLGVAVMREEVARSMPKGGHGTTFGGNPL 289 (395)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTSSCEEEEEEHHHHHTSCTTSSCCSSTTCHH
T ss_pred HHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEEEEcccccCCCceEEEEehHHHHhhhccCCcCCCcCCCHH
Confidence 7775 8999999975310 0 00 0000 000011111110 0 00 111001111122333
Q ss_pred ---HHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCC--eEEeCCCCceeEEEEeeccccccccccccCccCCccHH
Q psy13453 141 ---KLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDR--FELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDL 215 (764)
Q Consensus 141 ---klWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~--~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~ 215 (764)
.+.++++.+.. .++.++..++++++.+.+++.+. +.. .++.-+++.|++.. .
T Consensus 290 ~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~g~~~~~~~~~---------------~---- 346 (395)
T 1vef_A 290 AMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPSPKIRE-VRGMGLMVGLELKE---------------K---- 346 (395)
T ss_dssp HHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCCTTEEE-EEEETTEEEEEESS---------------C----
T ss_pred HHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhcCceEE-EEEEEEEEEEEEcC---------------h----
Confidence 34555665544 34667777889999999988643 111 12233456665421 1
Q ss_pred HHHHHHHHH-hcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 216 NKAVYDRII-ARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 216 n~~L~~~L~-~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
..++.++|. +.|..+... +..++|+++ +..+++++++.+++.|+++
T Consensus 347 ~~~l~~~l~~~~gi~v~~~----~~~~iRi~~-~~~~~~~~i~~~~~~l~~~ 393 (395)
T 1vef_A 347 AAPYIARLEKEHRVLALQA----GPTVIRFLP-PLVIEKEDLERVVEAVRAV 393 (395)
T ss_dssp SHHHHHHHHHHHCEECEES----STTEEEECC-CTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCeEEecC----CCCEEEEeC-CCCCCHHHHHHHHHHHHHH
Confidence 246777887 788654332 456899964 4577899999999998775
No 402
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=96.79 E-value=0.01 Score=65.92 Aligned_cols=120 Identities=11% Similarity=0.036 Sum_probs=84.1
Q ss_pred cEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCCcchhHHHHHHhCCCc-eEEEec--CCCCcc
Q psy13453 590 GGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQSNSSVEKSAIIGDVP-VRQLRS--DDNGVL 666 (764)
Q Consensus 590 ~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~aH~Sv~kAa~~lGl~-v~~Vp~--d~~g~m 666 (764)
..+-|.|||.|...|+........ .+.-.|++++=+-.+-....+..|.. |...+. ++++.+
T Consensus 111 ~~~qt~ggtga~~~a~~~l~~~~~---------------~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~ 175 (420)
T 4h51_A 111 VAVQTLSGTGAVSLGAKLLTRVFD---------------AETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSL 175 (420)
T ss_dssp EEEEEEHHHHHHHHHHHHHTTTSC---------------TTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEE
T ss_pred ceeeecCchHHHHHHHHHHHHhcC---------------CCCCEEEEecCCchhHHHHHHHcCCeEEEeeccccccccCC
Confidence 456689999998777654432211 12224666665555555556778886 444333 256779
Q ss_pred cHHHHHHHHHHhhhcCCCceEEEEeeccCCcccc---ccHHHHHHHHHhcCCEEEEeccccccc
Q psy13453 667 RGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAF---DNLEELGPICQEYNIWLHVDAAYAGSA 727 (764)
Q Consensus 667 d~~~Le~~I~~~~~~G~~p~~VvataGTT~~Gai---Dpl~eIa~i~~~~glwLHVDaA~Gg~~ 727 (764)
|.+.+.+.++... ....+++.+..++.||.. +.+++|+++|+++++|+..|-+|.+..
T Consensus 176 d~~~~~~~l~~~~---~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~ 236 (420)
T 4h51_A 176 NFEGMKKDILAAP---DGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYA 236 (420)
T ss_dssp CHHHHHHHHHHSC---SSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTT
T ss_pred CHHHHHHHHhccC---CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhc
Confidence 9999999887643 235677777888999988 678889999999999999999998854
No 403
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=96.78 E-value=0.002 Score=70.11 Aligned_cols=213 Identities=10% Similarity=0.010 Sum_probs=122.9
Q ss_pred eeeeHHHHHhhcCCC-CCCeEEecCC--CCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccc---cCchhhhc--
Q psy13453 20 LIYESFKATHSLSGT-PDQVRLSGLP--DSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDI---QSLNAPVS-- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~-~~~v~~Vpvd--~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~i---Dpi~~ia~-- 90 (764)
.|.++..++..+|.. . +.+|++ +++.+|+++|+++|++. +..+.+ +-+.+..++|.+ +.++++++
T Consensus 139 ~y~~~~~~~~~~g~~~~---~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~ 212 (412)
T 1ajs_A 139 TWENHNGVFTTAGFKDI---RSYRYWDTEKRGLDLQGFLSDLENA---PEFSIFVLHACAHNPTGTDPTPEQWKQIASVM 212 (412)
T ss_dssp CCTHHHHHHHHTTCSCE---EEEECEETTTTEECHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCcee---EEEeeecCCCCccCHHHHHHHHHhC---CCCcEEEEECCCCCCCCCCCCHHHHHHHHHHH
Confidence 456778889999886 5 889994 67899999999999763 112345 468888999998 44555554
Q ss_pred ---CCCceeccccccc-cc-------e-----------eeeecCCCcccc-ccccccccC---Ccc------------cC
Q psy13453 91 ---NGPLKVGGVLRRV-YS-------S-----------CLVPRGQKSLRT-TVLFHFLFQ---HWQ------------IP 132 (764)
Q Consensus 91 ---~~wlHVDa~l~~~-y~-------s-----------~ll~rd~~~l~~-~~s~~~d~~---d~t------------le 132 (764)
++++++|.+.... +. + +++..-.+.+-. -+...+-+. +.. ..
T Consensus 213 ~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~ 292 (412)
T 1ajs_A 213 KRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVR 292 (412)
T ss_dssp HHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred HHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 8899999863111 10 1 011111111100 000000010 100 00
Q ss_pred C-CCcccHHHHHHHHHHc--c------HHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEeCCCCceeEEEEeecccccc
Q psy13453 133 L-GRRFRALKLWMTLRSY--G------LKGLQAYLRKHISLAKKFADLVEQDD---RFELVCPPSMGLVCFRLKVRFWDK 200 (764)
Q Consensus 133 ~-SRr~~ALklWatL~~l--G------~eGy~~~i~~~i~lA~~l~~~I~~~p---~~ell~~P~l~iV~Fry~P~~~~~ 200 (764)
. .-....+..+++...+ + .+.+.++.++..+..+++.+.|++.. +++++ .|.-+...|-
T Consensus 293 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~-------- 363 (412)
T 1ajs_A 293 VTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHI-TDQIGMFSFT-------- 363 (412)
T ss_dssp TTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHH-HHCCSSEEEC--------
T ss_pred cccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEE-cCCCceEEEe--------
Confidence 0 0112333344443333 2 34677788888889999999999864 46543 3444455551
Q ss_pred ccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 201 LDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 201 ~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
+.+ ...+...+.+.|..+. . .+|+++.. +++++++.+++.|+++.++
T Consensus 364 ----------~~~--~~~~~~~l~~~gv~v~-~-------~~Ris~~~--~~~~~i~~~~~~l~~~l~~ 410 (412)
T 1ajs_A 364 ----------GLN--PKQVEYLINQKHIYLL-P-------SGRINMCG--LTTKNLDYVATSIHEAVTK 410 (412)
T ss_dssp ----------CCC--HHHHHHHHHTTCEECC-T-------TSEEEGGG--CCTTTHHHHHHHHHHHHHH
T ss_pred ----------CCC--HHHHHHHHHhCCEEec-C-------CcEEEeee--CCHHHHHHHHHHHHHHHHh
Confidence 111 2345555667786432 1 26998873 4788999999999887654
No 404
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=96.77 E-value=0.0012 Score=71.30 Aligned_cols=75 Identities=4% Similarity=-0.109 Sum_probs=57.8
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecC--CCCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccc---cCchhhhc---
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGL--PDSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDI---QSLNAPVS--- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpv--d~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~i---Dpi~~ia~--- 90 (764)
.|.++..++...|... +.+|+ ++++.+|+++|+++|++.. ..+.+ +-+.+..++|.+ +++.++++
T Consensus 130 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~ 203 (397)
T 3fsl_A 130 TWENHVAIFAGAGFEV---STYPWYDEATNGVRFNDLLATLKTLQ---AGSIVLLHPCCHNPTGADLTNDQWDAVIEILK 203 (397)
T ss_dssp CCHHHHHHHHHTTCCE---EEECCEETTTTEECHHHHHHHHTTCC---TTCEEEECSSSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CchhHHHHHHHcCCce---EEEeeeeccCCcCcHHHHHHHHHhCC---CCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHH
Confidence 4567788899999877 99999 4688999999999997531 12344 567788999998 66667665
Q ss_pred --CCCceecccc
Q psy13453 91 --NGPLKVGGVL 100 (764)
Q Consensus 91 --~~wlHVDa~l 100 (764)
++++++|...
T Consensus 204 ~~~~~li~De~~ 215 (397)
T 3fsl_A 204 ARELIPFLDIAY 215 (397)
T ss_dssp HTTCEEEEEESC
T ss_pred hCCEEEEEecCc
Confidence 8899999853
No 405
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=96.71 E-value=0.0049 Score=68.71 Aligned_cols=174 Identities=10% Similarity=-0.031 Sum_probs=101.3
Q ss_pred HHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEee----CCcccccccCchhhhc-------CCCc
Q psy13453 26 KATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYC----GRTLHQDIQSLNAPVS-------NGPL 94 (764)
Q Consensus 26 KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatA----GTT~~G~iDpi~~ia~-------~~wl 94 (764)
+++...|+.. +.||+++++++|+++|+++|++. .++-+++... ++-++|.+.|++++++ ++++
T Consensus 142 ~~l~~~G~~~---~~v~~~~~g~~D~e~l~~~l~~~---~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~l 215 (427)
T 3i16_A 142 GSLKEFGINY---KQVDLKEDGKPNLEEIEKVLKED---ESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIIC 215 (427)
T ss_dssp CCTGGGTCEE---EECCCCTTSSCCHHHHHHHHHTC---TTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEE
T ss_pred HHHHHcCCEE---EEecCccCCCcCHHHHHHHhhCC---CCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEE
Confidence 5566678766 89999999999999999999831 0122443333 7889999999999764 6899
Q ss_pred eecccccccc--------c-eeeeecCCCccccc------cc-cccc----cCC--cccCCCCcccH-HH-HHHHHHHcc
Q psy13453 95 KVGGVLRRVY--------S-SCLVPRGQKSLRTT------VL-FHFL----FQH--WQIPLGRRFRA-LK-LWMTLRSYG 150 (764)
Q Consensus 95 HVDa~l~~~y--------~-s~ll~rd~~~l~~~------~s-~~~d----~~d--~tle~SRr~~A-Lk-lWatL~~lG 150 (764)
+||.+....+ + -+++..-.+.+-.. +- ...+ ... +....+....+ +. .|+.++ |
T Consensus 216 ivD~a~~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~--g 293 (427)
T 3i16_A 216 FVDNCYGEFMDTKEPTDVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQ--G 293 (427)
T ss_dssp EEECTTTTTSSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHH--H
T ss_pred EEECCCccccccCCccccCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCccCccCCccHHHHHHHHH--H
Confidence 9999642221 0 11221111221110 00 0000 000 00011110111 22 455544 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCce-----eEEEEeeccccccccccccCccCCccHHHHHHHHHHHh
Q psy13453 151 LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMG-----LVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIA 225 (764)
Q Consensus 151 ~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~-----iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~ 225 (764)
.+-...++++..+.|+++++.++++ ++++... ... +++|... ..+-..++.+.|+.
T Consensus 294 l~~~~~r~~~~~~~a~~la~~L~~~-g~~V~p~-~~~~~~~~i~~i~l~-----------------~~~~~~~f~~~l~~ 354 (427)
T 3i16_A 294 LFLAPHISMEALKGAILCSRIMELA-GFEVMPK-YDEKRSDIIQSIKFN-----------------DKDKLIEFCKGIQT 354 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT-TCEEESC-TTSCCSSSCEEEECS-----------------SHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCeecCC-CCCCCccEEEEEEEC-----------------CHHHHHHHHHHHhh
Confidence 4566789999999999999999997 4577432 333 7777652 22334577777775
Q ss_pred c
Q psy13453 226 R 226 (764)
Q Consensus 226 ~ 226 (764)
.
T Consensus 355 ~ 355 (427)
T 3i16_A 355 G 355 (427)
T ss_dssp T
T ss_pred c
Confidence 4
No 406
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=96.67 E-value=0.0018 Score=71.92 Aligned_cols=161 Identities=6% Similarity=-0.110 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCCCCcEEEeCChHHHHHHHHHHHHHHHhhhhccCCCCCccccccCceEEEecCC
Q psy13453 560 CTELEVLVMNWLGKALGLPEEFLNCSPGPGGGIIQSTASEATLVSILVAKRKMINHWQSKNPSLTENDIRNKLVAYTSDQ 639 (764)
Q Consensus 560 ~t~lE~~v~~~la~llG~p~~~~~~~~~~~~GvfTsGgTeANl~Al~aAR~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~ 639 (764)
..++++.+.+|+.+.-+..- .....++|+|+++++..++.+.... ... . ...+...|+++.-
T Consensus 102 ~~~lr~aia~~~~~~~~~~~-------~~~~iv~t~G~~~al~~~~~~l~~~-~~~----~------~~~~Gd~Vlv~~P 163 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAA-------KDRYIVFGVGVTQLIHGLVISLSPN-MTA----T------PDAPESKVVAHAP 163 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCC-------TTCEEEEESHHHHHHHHHHHHHSCC-TTT----C------TTSCCEEEEECSS
T ss_pred hHHHHHHHHHHHHHhCCcCC-------CCCEEEEeCCHHHHHHHHHHHHhhc-ccc----c------cCCCCCEEEEeCC
Confidence 57788888888877543211 1136799999999987776543100 000 0 0112346888999
Q ss_pred cchhHHHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEEE
Q psy13453 640 SNSSVEKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLHV 719 (764)
Q Consensus 640 aH~Sv~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLHV 719 (764)
.|......++..|.+++. +.+|+++|++++++. +-+|+.+..++.+|.+-+ + +++ +++...
T Consensus 164 ~y~~~~~~~~~~g~~~~~------~~~d~~~l~~~~~~~------~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~ 224 (427)
T 2hox_A 164 FYPVFREQTKYFDKKGYV------WAGNAANYVNVSNPE------QYIEMVTSPNNPEGLLRH-A----VIK--GCKSIY 224 (427)
T ss_dssp CCHHHHHHHHHSCBTTEE------EEEEGGGGTTCSCGG------GEEEEEESSCTTTCCCCC-C----SST--TCEEEE
T ss_pred CcccHHHHHHHcCCeeee------ecCCHHHHHHhhcCC------ceEEEEcCCCCCcccccH-H----HHc--CCCEEE
Confidence 999999999999988653 457888888777542 346777888999999887 3 333 568888
Q ss_pred eccccccccccchhhhhhcCCCcccEEEEcCCccCCCC-cCceee
Q psy13453 720 DAAYAGSALLLPEYAHLKRGLEYVDSFDFNTHKWLLVN-FDCSAM 763 (764)
Q Consensus 720 DaA~Gg~~l~~~~~r~~l~gie~aDSit~d~HK~l~~P-~~~g~l 763 (764)
|.++-... ..... +. ...+-+..++||.++.| .-+|.+
T Consensus 225 d~~~~~~~---~s~~~-~~--~~~~i~~~S~SK~~g~~G~RiG~~ 263 (427)
T 2hox_A 225 DMVYYWPH---YTPIK-YK--ADEDILLFTMSKFTGHSGSRFGWA 263 (427)
T ss_dssp ECTTCSTT---TSCCC-SC--BCCSEEEEEHHHHTSCGGGCCEEE
T ss_pred eecccCCC---CCccc-cC--CCceEEEEeChhcCCCCCceEEEE
Confidence 87764210 00000 11 23588999999988755 224544
No 407
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=96.64 E-value=0.015 Score=62.73 Aligned_cols=186 Identities=9% Similarity=0.020 Sum_probs=106.7
Q ss_pred cHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC----chhhhc-----CCCceeccccccc------cc--------e
Q psy13453 50 AYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS----LNAPVS-----NGPLKVGGVLRRV------YS--------S 106 (764)
Q Consensus 50 D~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp----i~~ia~-----~~wlHVDa~l~~~------y~--------s 106 (764)
|+++|+++|+.+ +-+++-+....++|.+-| ++++++ ++++++|.+.... ++ -
T Consensus 171 d~~~l~~~l~~~-----~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d 245 (392)
T 3ruy_A 171 DLEALKAAITPN-----TAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPD 245 (392)
T ss_dssp CHHHHHHHCCTT-----EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS
T ss_pred cHHHHHHHhccC-----eEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCC
Confidence 899999999732 224445558899999988 888775 8999999865211 10 0
Q ss_pred eeeecCCCccccc-ccccc--------c-cCCcccCCCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcC-
Q psy13453 107 CLVPRGQKSLRTT-VLFHF--------L-FQHWQIPLGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQD- 175 (764)
Q Consensus 107 ~ll~rd~~~l~~~-~s~~~--------d-~~d~tle~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~- 175 (764)
++.+ .+.+..- +...+ + +.......+-....+..+++...+-.-...+..++..++++++.+.|++.
T Consensus 246 ~~~~--SK~l~gG~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~ 323 (392)
T 3ruy_A 246 MYIL--GKALGGGVFPISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEID 323 (392)
T ss_dssp EEEE--CGGGGTTTSCCEEEEECHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEE--chhhhCChhhhEEEEECHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhc
Confidence 1111 1122221 01110 1 11111111123344444444333322222677788889999999999986
Q ss_pred -CCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHH
Q psy13453 176 -DRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEES 254 (764)
Q Consensus 176 -p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e 254 (764)
+.+.. .++.-+.+.|.+.. + ..++.++|.++|..+... +..++|+++ ...++++
T Consensus 324 ~~~~~~-~~~~g~~~~~~~~~---------------~----~~~l~~~l~~~gi~v~~~----~~~~iRi~~-~~~~~~~ 378 (392)
T 3ruy_A 324 NPMITE-VRGKGLFIGIELNE---------------P----ARPYCEQLKAAGLLCKET----HENVIRIAP-PLVISEE 378 (392)
T ss_dssp CTTEEE-EEEETTEEEEEESS---------------C----SHHHHHHHHTTTEECCCB----TTTEEEECC-CTTCCHH
T ss_pred CCCceE-EEeeeeEEEEEEcc---------------h----HHHHHHHHHHCCcEEecC----CCCEEEEEC-CCCCCHH
Confidence 33433 23445556665321 0 146788888888643221 246899964 3456899
Q ss_pred HHHHHHHHHHHHH
Q psy13453 255 DVQLGWNEIRTAT 267 (764)
Q Consensus 255 ~i~~~l~~l~~~~ 267 (764)
+++.+++.|+++.
T Consensus 379 ~i~~~~~~l~~~l 391 (392)
T 3ruy_A 379 DLEWAFQKIKAVL 391 (392)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998753
No 408
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=96.58 E-value=0.015 Score=63.40 Aligned_cols=146 Identities=10% Similarity=0.054 Sum_probs=85.2
Q ss_pred eeeHHHH----HhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----C
Q psy13453 21 IYESFKA----THSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----N 91 (764)
Q Consensus 21 ~YSv~KA----a~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~ 91 (764)
|.+..++ +..+|+.. +.||. .|+++|+++|+++ +-+++...++.++|.+.|++++++ +
T Consensus 108 y~~~~~~~~~~~~~~g~~~---~~v~~-----~d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~l~~i~~~~~~~~ 174 (389)
T 3acz_A 108 YGCTVSLFTHWLPRFGIEV---DLIDT-----SDVEKVKAAWKPN-----TKMVYLESPANPTCKVSDIKGIAVVCHERG 174 (389)
T ss_dssp CHHHHHHHHHHHHHTTCEE---EEECT-----TCHHHHHHTCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHcCCEE---EEECC-----CCHHHHHHhcCCC-----CeEEEEECCCCCCCeecCHHHHHHHHHHcC
Confidence 4444554 57788766 77877 3899999988753 224456789999999999999886 8
Q ss_pred CCceecccccccc-------c-eeeeecCCCccccc-------ccccc-cc----CCcccCCCCcccHHHHHHHHHHccH
Q psy13453 92 GPLKVGGVLRRVY-------S-SCLVPRGQKSLRTT-------VLFHF-LF----QHWQIPLGRRFRALKLWMTLRSYGL 151 (764)
Q Consensus 92 ~wlHVDa~l~~~y-------~-s~ll~rd~~~l~~~-------~s~~~-d~----~d~tle~SRr~~ALklWatL~~lG~ 151 (764)
+++++|......+ . -+++..-.|.+... ....- ++ ..+.-..+-....+..|+.++.+
T Consensus 175 ~~livD~~~~~~~~~~~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l-- 252 (389)
T 3acz_A 175 ARLVVDATFTSPCFLKPLELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMDAFLCARGM-- 252 (389)
T ss_dssp CEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH--
T ss_pred CEEEEECCCccccccCccccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCc--
Confidence 9999999642111 0 01111111111100 00000 00 00000001113345567666554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q psy13453 152 KGLQAYLRKHISLAKKFADLVEQDDRFELV 181 (764)
Q Consensus 152 eGy~~~i~~~i~lA~~l~~~I~~~p~~ell 181 (764)
+.+..++++..+.++.+++.+++++.++-+
T Consensus 253 ~~l~~r~~~~~~~~~~l~~~l~~~~~v~~~ 282 (389)
T 3acz_A 253 KTLPIRMQIHMENGLKVAKFLEQHEKIVKV 282 (389)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred cHHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 446677888889999999999988765544
No 409
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=96.56 E-value=0.012 Score=62.99 Aligned_cols=183 Identities=8% Similarity=-0.060 Sum_probs=102.8
Q ss_pred ccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC----chhhhc-----CCCceecccccc-cc-c------------
Q psy13453 49 LAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS----LNAPVS-----NGPLKVGGVLRR-VY-S------------ 105 (764)
Q Consensus 49 mD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp----i~~ia~-----~~wlHVDa~l~~-~y-~------------ 105 (764)
.|+++|+++|+++ +-+++.+..+.++|.+.| ++++++ ++++++|..... .+ +
T Consensus 160 ~d~~~l~~~l~~~-----~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 234 (375)
T 2eh6_A 160 NDIDSVYKLLDEE-----TAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKP 234 (375)
T ss_dssp TCHHHHHTTCCTT-----EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCC
T ss_pred chHHHHHHHhcCC-----eEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCC
Confidence 5899999988642 224445668888999966 777765 899999996531 00 0
Q ss_pred eeeeecCCCcccccccccc-----c----cCCcccCCCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy13453 106 SCLVPRGQKSLRTTVLFHF-----L----FQHWQIPLGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDD 176 (764)
Q Consensus 106 s~ll~rd~~~l~~~~s~~~-----d----~~d~tle~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p 176 (764)
.++.+. +.+..-+...+ + +.......+-+...+..++++..+-.- .+..++..++++++.+.|++.+
T Consensus 235 d~~s~S--K~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~L~~~~ 310 (375)
T 2eh6_A 235 DVIALA--KGLGGGVPIGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEV--EKLLPHVREVGNYFKEKLKELG 310 (375)
T ss_dssp SEEEEC--GGGGTTSCCEEEEEEHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEEc--ccccCCCCeEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHh
Confidence 011111 11111000000 0 111001111233445444443332211 1677788888999999998875
Q ss_pred CeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHH
Q psy13453 177 RFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDV 256 (764)
Q Consensus 177 ~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i 256 (764)
...+ ++.-+.+.|++.. + ..++.++|.++|...... +..++|+++ ...++++++
T Consensus 311 ~~~~--~~~g~~~~~~~~~---------------~----~~~~~~~l~~~gi~~~~~----~~~~iRi~~-~~~~~~~~i 364 (375)
T 2eh6_A 311 KGKV--KGRGLMLGLELER---------------E----CKDYVLKALEKGLLINCT----AGKVLRFLP-PLIIQKEHI 364 (375)
T ss_dssp SSEE--EEETTEEEEECSS---------------C----CHHHHHHHHHTTEECEEE----TTTEEEECC-CTTCCHHHH
T ss_pred cCCc--eEEEEEEEEEEcC---------------c----HHHHHHHHHHCCCEEecC----CCCEEEEEC-CCCCCHHHH
Confidence 4222 2334455554420 1 136777788888744322 356899965 346789999
Q ss_pred HHHHHHHHHH
Q psy13453 257 QLGWNEIRTA 266 (764)
Q Consensus 257 ~~~l~~l~~~ 266 (764)
+.+++.|+++
T Consensus 365 ~~~~~~l~~~ 374 (375)
T 2eh6_A 365 DRAISVLREI 374 (375)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999988764
No 410
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=96.52 E-value=0.026 Score=61.32 Aligned_cols=78 Identities=6% Similarity=-0.233 Sum_probs=56.5
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecC-CCCCcccHHHHHHHHHHHhhCCCCcEEEEeeC-CcccccccCchhhh--------
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGL-PDSEWLAYLTLRTIYESFRKSFLCPMCSGYCG-RTLHQDIQSLNAPV-------- 89 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpv-d~~~rmD~~aLe~~I~~~~~~G~~p~~VatAG-TT~~G~iDpi~~ia-------- 89 (764)
.+.+...++...|... +.+|+ ++++.+|+++|+++|++....+.+-+++-+.+ ..++|.+=|.+++.
T Consensus 134 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~ 210 (413)
T 3t18_A 134 YWAPYRKICEEFGRNF---KTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKE 210 (413)
T ss_dssp CCTHHHHHHHHHTCEE---EEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHhCCeE---EEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 3456678889999877 99999 56689999999999986432222113455666 89999998777643
Q ss_pred -----c-CCCceecccc
Q psy13453 90 -----S-NGPLKVGGVL 100 (764)
Q Consensus 90 -----~-~~wlHVDa~l 100 (764)
+ ++++.+|...
T Consensus 211 ~~~~~~~~~~li~De~y 227 (413)
T 3t18_A 211 KAEDKDKKITLIVDVAY 227 (413)
T ss_dssp HTTSTTCEEEEEEECTT
T ss_pred HhhccCCcEEEEEeccc
Confidence 2 6788999863
No 411
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=96.40 E-value=0.021 Score=62.74 Aligned_cols=64 Identities=6% Similarity=-0.096 Sum_probs=49.3
Q ss_pred HHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----C-CCceec
Q psy13453 24 SFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----N-GPLKVG 97 (764)
Q Consensus 24 v~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~-~wlHVD 97 (764)
+.+.+..+|+.. +.||++ |+++|+++|+++ +-+++...++.++|.+-|++++++ + +++++|
T Consensus 122 ~~~~~~~~G~~v---~~v~~~-----d~~~l~~~i~~~-----t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD 188 (403)
T 3cog_A 122 FRQVASEFGLKI---SFVDCS-----KIKLLEAAITPE-----TKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVD 188 (403)
T ss_dssp HHHTGGGGTCEE---EEECTT-----SHHHHHHHCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEE
T ss_pred HHHHHHHcCCEE---EEECCC-----CHHHHHHhcCcC-----CeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEE
Confidence 334456778766 888876 899999988743 224456789999999999999886 7 999999
Q ss_pred ccc
Q psy13453 98 GVL 100 (764)
Q Consensus 98 a~l 100 (764)
...
T Consensus 189 ~~~ 191 (403)
T 3cog_A 189 NTF 191 (403)
T ss_dssp CTT
T ss_pred CCC
Confidence 964
No 412
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=96.33 E-value=0.0043 Score=68.07 Aligned_cols=76 Identities=3% Similarity=-0.212 Sum_probs=56.9
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecC--CCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc---cCchhhhc----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGL--PDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI---QSLNAPVS---- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpv--d~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i---Dpi~~ia~---- 90 (764)
.+.+...+++..|... +.||+ ++++.+|+++|+++|++.. .++-+++-+.++.++|.+ +.+.++++
T Consensus 152 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~d~~~l~~~l~~~~--~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~ 226 (420)
T 4f4e_A 152 SWENHRALFDMAGFEV---VAYPYYDAKTNGVNFDGMLAALNGYE--PGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKA 226 (420)
T ss_dssp CCHHHHHHHHHTTCCE---EEEECEETTTTEECHHHHHHHHTTCC--TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CcHhHHHHHHHcCCeE---EEeeeeccccCccCHHHHHHHHHhCC--CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 3566778889999877 99999 3578999999999997431 122233677788999998 55566654
Q ss_pred -CCCceecccc
Q psy13453 91 -NGPLKVGGVL 100 (764)
Q Consensus 91 -~~wlHVDa~l 100 (764)
++++++|.+.
T Consensus 227 ~~~~li~De~y 237 (420)
T 4f4e_A 227 RRLVPFLDIAY 237 (420)
T ss_dssp HTCEEEEEESC
T ss_pred CCcEEEEcccc
Confidence 8899999863
No 413
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=96.30 E-value=0.018 Score=62.51 Aligned_cols=94 Identities=16% Similarity=0.190 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHhc-CC--CeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEecee
Q psy13453 160 KHISLAKKFADLVEQ-DD--RFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSF 236 (764)
Q Consensus 160 ~~i~lA~~l~~~I~~-~p--~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l 236 (764)
+.-+..+++.+.|++ .+ ++++..+..-..+.+++... ..+ ..++.++|.+.|..+......
T Consensus 310 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~--------------~~~--~~~l~~~l~~~gi~v~~g~~f 373 (417)
T 3g7q_A 310 FYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDL--------------PIT--TELLYQRLKARGVLMVPGHYF 373 (417)
T ss_dssp HHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEECTTC--------------SSC--HHHHHHHHHHTTEECEEGGGG
T ss_pred HHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEcCCC--------------CCC--HHHHHHHHHHCCEEEECchhh
Confidence 344556667777766 45 36665443333333443210 111 246778888889765543322
Q ss_pred C-C--------eeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 237 Q-D--------RLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 237 ~-g--------~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
. + ..++|+++.. ++++++++++.|.++.+++.+
T Consensus 374 ~~~~~~~~~~~~~~iRis~~~---~~~~i~~~~~~l~~~l~~~~~ 415 (417)
T 3g7q_A 374 FPGLDKPWPHTHQCMRMNYVP---EPDKIEAGVKILAEEIERAWR 415 (417)
T ss_dssp CTTBSSCCGGGGGEEEEESCS---CHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccccccCCCeEEEEecC---CHHHHHHHHHHHHHHHHHHHh
Confidence 1 1 4689998864 899999999999998877653
No 414
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=96.24 E-value=0.0042 Score=69.94 Aligned_cols=61 Identities=5% Similarity=-0.087 Sum_probs=47.9
Q ss_pred HHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----CCCceecccc
Q psy13453 27 ATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-----NGPLKVGGVL 100 (764)
Q Consensus 27 Aa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-----~~wlHVDa~l 100 (764)
.+...|... +.||++ |+++|+++|+++ +-+++-+.++.++|.+-|++++++ ++++++|...
T Consensus 191 ~~~~~G~~v---~~v~~~-----d~~~l~~~i~~~-----tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~ 256 (464)
T 1ibj_A 191 VVPRSGVVV---KRVNTT-----KLDEVAAAIGPQ-----TKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSI 256 (464)
T ss_dssp TSGGGTCEE---EEECTT-----SHHHHHHHCCSS-----EEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTT
T ss_pred HHHHcCCEE---EEeCCC-----CHHHHHHHhccC-----ceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCC
Confidence 456778765 888875 899999998642 224457888899999999999886 8899999965
No 415
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=96.17 E-value=0.01 Score=65.65 Aligned_cols=153 Identities=8% Similarity=-0.065 Sum_probs=90.2
Q ss_pred HHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEee----CCcccccccCchhhhc-------CCCce
Q psy13453 27 ATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYC----GRTLHQDIQSLNAPVS-------NGPLK 95 (764)
Q Consensus 27 Aa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatA----GTT~~G~iDpi~~ia~-------~~wlH 95 (764)
.+...|+.. +.||+++++++|+++|+++|+++ +-+++... ++-++|.+.|++++++ ++++|
T Consensus 128 ~l~~~G~~~---~~v~~~~~g~~d~e~l~~ai~~~-----tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~li 199 (409)
T 3jzl_A 128 SLKDFHIGY---SSVPLLENGDVDFPRIAKKMTPK-----TKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVF 199 (409)
T ss_dssp CTGGGTCEE---EECCCCTTSCCCHHHHHHHCCTT-----EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEE
T ss_pred HHHHcCCEE---EEeCCCCCCCcCHHHHHHhccCC-----CeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEE
Confidence 445567766 89999999999999999999753 22444444 7889999999999774 68999
Q ss_pred ecccccccc--------c-eeeeecCCCccccc------cc-cccc------c--CCccc--CCCCcccHHHHHHHHHHc
Q psy13453 96 VGGVLRRVY--------S-SCLVPRGQKSLRTT------VL-FHFL------F--QHWQI--PLGRRFRALKLWMTLRSY 149 (764)
Q Consensus 96 VDa~l~~~y--------~-s~ll~rd~~~l~~~------~s-~~~d------~--~d~tl--e~SRr~~ALklWatL~~l 149 (764)
||.+....+ + -++...-.|.+-.. +- ...+ . ....+ .++-... ..|+.++
T Consensus 200 vD~a~~~~~~~~~p~~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~~~~--~~~~~l~-- 275 (409)
T 3jzl_A 200 VDNCYGEFVEYQEPPEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGASLY--SLLEMYQ-- 275 (409)
T ss_dssp EECTTCTTTSSCCSGGGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTT--CHHHHHH--
T ss_pred EeCCcccccccCCccccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccccccccccHH--HHHHHHH--
Confidence 999743221 0 11111111211100 00 0000 0 00011 1111110 1344433
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCce-----eEEEEe
Q psy13453 150 GLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMG-----LVCFRL 193 (764)
Q Consensus 150 G~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~-----iV~Fry 193 (764)
|.+-...++++..+.|+++++.++++ ++++... ... +++|..
T Consensus 276 gl~~~~~r~~~~~~~a~~la~~L~~~-g~~v~p~-~~~~~~~~i~~i~l 322 (409)
T 3jzl_A 276 GFFLAPHVTAQAIKGARFTAAMLAEF-GVEADPV-WDAPRTDLIQSVSF 322 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEESC-TTSCCSSSCCEEEC
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHhC-CCcccCC-CCCCCccEEEEEEe
Confidence 44556788999999999999999997 5677433 233 667754
No 416
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=96.12 E-value=0.034 Score=60.03 Aligned_cols=191 Identities=14% Similarity=0.044 Sum_probs=103.2
Q ss_pred cHHHHHHHHHHHhhCCCCcEE-EEeeCCccccc-----ccCchhhhc-----CCCceeccccccc------cc-------
Q psy13453 50 AYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQD-----IQSLNAPVS-----NGPLKVGGVLRRV------YS------- 105 (764)
Q Consensus 50 D~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~-----iDpi~~ia~-----~~wlHVDa~l~~~------y~------- 105 (764)
|+++|+++|++. +-+ +.+ +..++|. .++++++++ ++++++|.+.... +.
T Consensus 172 d~~~l~~~l~~~------~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 244 (406)
T 4adb_A 172 DINSASALIDDS------TCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVT 244 (406)
T ss_dssp CHHHHHTTCSTT------EEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCC
T ss_pred cHHHHHHHhcCC------eEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCC
Confidence 799999988632 334 444 7777774 456777665 8999999865211 10
Q ss_pred -eeeeecCCCcccccccccc--------c-cCCcccCCCCcccHHHHHHH---HHHccHHHHHHHHHHHHHHHHHHHHHH
Q psy13453 106 -SCLVPRGQKSLRTTVLFHF--------L-FQHWQIPLGRRFRALKLWMT---LRSYGLKGLQAYLRKHISLAKKFADLV 172 (764)
Q Consensus 106 -s~ll~rd~~~l~~~~s~~~--------d-~~d~tle~SRr~~ALklWat---L~~lG~eGy~~~i~~~i~lA~~l~~~I 172 (764)
-++.+ .+.+..-+...+ + +.......+-....+..+++ |+.+.. .++.++..++++++.+.+
T Consensus 245 ~d~~t~--sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l 319 (406)
T 4adb_A 245 PDLLTT--AKALGGGFPVGALLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERL 319 (406)
T ss_dssp CSEEEE--CGGGGTTSCCEEEEECHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHH
T ss_pred CCEEEe--chhhcCCCCeEEEEEcHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHH
Confidence 01111 111111000100 0 11111111123344444444 444433 466667777788888888
Q ss_pred hcCCC-eEEeC--CCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCC
Q psy13453 173 EQDDR-FELVC--PPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSS 249 (764)
Q Consensus 173 ~~~p~-~ell~--~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np 249 (764)
++... +.++. ...-.++.|.... .......++.++|.++|..+.. .+..++|++ .+.
T Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~---------------~~~~~~~~~~~~l~~~gi~v~~----~~~~~iRi~-~~~ 379 (406)
T 4adb_A 320 NTINHRYGLFSEVRGLGLLIGCVLNA---------------DYAGQAKQISQEAAKAGVMVLI----AGGNVVRFA-PAL 379 (406)
T ss_dssp HHHHHHHCCEEEEEEETTEEEEEECT---------------TTTTCHHHHHHHHHHTTEECEE----SSTTEEEEC-CCT
T ss_pred HHHHHhCCCceEEEEEEEEEEEEEeC---------------CcHHHHHHHHHHHHHCCcEEee----cCCCeEEEE-CCC
Confidence 76421 11111 1122344554421 0000135788888889875433 235689995 455
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 250 QTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 250 ~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
.+++++++.+++.|+++.+++.+
T Consensus 380 ~~~~e~i~~~~~~l~~~l~~~~~ 402 (406)
T 4adb_A 380 NVSEEEVTTGLDRFAAACEHFVS 402 (406)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHh
Confidence 67899999999999999887654
No 417
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=96.11 E-value=0.047 Score=59.74 Aligned_cols=216 Identities=7% Similarity=0.000 Sum_probs=119.9
Q ss_pred eeeeHHHHHhhcCCCC---------CCeEEecCCCC--CcccHHHHHHHHHHHhhCCCCcEEEEeeCCccccccc---Cc
Q psy13453 20 LIYESFKATHSLSGTP---------DQVRLSGLPDS--EWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQ---SL 85 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~---------~~v~~Vpvd~~--~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iD---pi 85 (764)
.|.++..++..+|... ..++.+|+++. +..|+++ ..++-+++-+.+..++|.+= .+
T Consensus 151 ~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------~~~~~~v~l~~p~NPtG~~~~~~~l 220 (432)
T 3ei9_A 151 SYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST----------VGRTDIIFFCSPNNPTGAAATREQL 220 (432)
T ss_dssp CCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG----------CCCCSEEEEESSCTTTCCCCCHHHH
T ss_pred CCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh----------CCCCCEEEEeCCCCCCCCCCCHHHH
Confidence 5677788888888532 24689999853 3455332 11233554457889999874 45
Q ss_pred hhhhc-----CCCceeccccccc-cc----eeeeecC-CC--cccccccc---------ccccCCccc------------
Q psy13453 86 NAPVS-----NGPLKVGGVLRRV-YS----SCLVPRG-QK--SLRTTVLF---------HFLFQHWQI------------ 131 (764)
Q Consensus 86 ~~ia~-----~~wlHVDa~l~~~-y~----s~ll~rd-~~--~l~~~~s~---------~~d~~d~tl------------ 131 (764)
.++++ ++++.+|.+.... ++ ++.-... .. ..-.+|+= .+-+..-.+
T Consensus 221 ~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~ 300 (432)
T 3ei9_A 221 TQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDF 300 (432)
T ss_dssp HHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHH
T ss_pred HHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHH
Confidence 55543 8899999864311 10 0000000 00 00000000 000000000
Q ss_pred -----CCCCcccHHHHHHHHHHcc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccc
Q psy13453 132 -----PLGRRFRALKLWMTLRSYG---LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDN 203 (764)
Q Consensus 132 -----e~SRr~~ALklWatL~~lG---~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~ 203 (764)
...-....+...+++..+- .+.+.++.++..+..+++.+.|++. ++++..+.....+.+.+.
T Consensus 301 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~--------- 370 (432)
T 3ei9_A 301 NRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYDVYGGKNAPYVWVHFP--------- 370 (432)
T ss_dssp HHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEECSSSSEEEEECT---------
T ss_pred HHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-CceecCCCcceEEEEECC---------
Confidence 0001233455555555554 3456778888889999999999987 888776555555555432
Q ss_pred cccCccCCccHHHHHHHHHHHhc-CcEEEEecee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 204 LFGTISFGDNDLNKAVYDRIIAR-KVIYIVKGSF--QDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 204 ~~~~~~~~~d~~n~~L~~~L~~~-G~~~vs~t~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
+.+ ..++.++|.++ |.++...... .+..++|+++.+ +++++++.++.|++..
T Consensus 371 -------~~~--~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~---~~e~l~~~l~rl~~~~ 425 (432)
T 3ei9_A 371 -------NQS--SWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFG---HRENILEACRRFKQLY 425 (432)
T ss_dssp -------TSC--HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS---CHHHHHHHHHHHHHHH
T ss_pred -------CCC--HHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecC---CHHHHHHHHHHHHHHh
Confidence 111 23566666654 7654443322 245789998743 7899999999887754
No 418
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=96.03 E-value=0.14 Score=55.84 Aligned_cols=203 Identities=10% Similarity=-0.030 Sum_probs=107.6
Q ss_pred CeEEecCCCCCc----------------ccHHHHH-HHHHHHhhCCCCcEE-EEeeCCcccccc-cC---chhhhc----
Q psy13453 37 QVRLSGLPDSEW----------------LAYLTLR-TIYESFRKSFLCPMC-SGYCGRTLHQDI-QS---LNAPVS---- 90 (764)
Q Consensus 37 ~v~~Vpvd~~~r----------------mD~~aLe-~~I~~~~~~G~~p~~-VatAGTT~~G~i-Dp---i~~ia~---- 90 (764)
.++.||.+++++ +|+++|+ ++|++... ...+.+ +.+--..++|.+ .+ ++++++
T Consensus 166 ~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~-~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~ 244 (419)
T 2eo5_A 166 GVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVP-PEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKK 244 (419)
T ss_dssp TEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCC-GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHH
T ss_pred CCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccC-CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHH
Confidence 578999987654 4799999 99985210 012334 343323457964 43 555554
Q ss_pred -CCCceeccccccc-c-c---e---------eeeecCCCccccc-ccccc-----ccCCcc-cC-CCCcccHHHHHHHHH
Q psy13453 91 -NGPLKVGGVLRRV-Y-S---S---------CLVPRGQKSLRTT-VLFHF-----LFQHWQ-IP-LGRRFRALKLWMTLR 147 (764)
Q Consensus 91 -~~wlHVDa~l~~~-y-~---s---------~ll~rd~~~l~~~-~s~~~-----d~~d~t-le-~SRr~~ALklWatL~ 147 (764)
++++++|...... + + + ++.+. +.+..- +...+ +...+. .. .+=....+...+++.
T Consensus 245 ~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~t~s--K~~~~G~~riG~~~~~~~~~~~~~~~~~t~~~n~~~~~aa~a 322 (419)
T 2eo5_A 245 YGILLVDDEVQMGLGRTGKLFAIENFNTVPDVITLA--KALGGGIMPIGATIFRKDLDFKPGMHSNTFGGNALACAIGSK 322 (419)
T ss_dssp HTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTTSCCEEEEEEGGGCCC------CCCCCHHHHHHHHH
T ss_pred cCCEEEEeccccCCccCcchhhHHhcCCCCCEEEec--ccccCCccceEEEEEchHhhcCCcccCCCCCCCHHHHHHHHH
Confidence 8899999964210 0 0 0 11010 111100 00000 111110 00 011224444444433
Q ss_pred HccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcC
Q psy13453 148 SYGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARK 227 (764)
Q Consensus 148 ~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G 227 (764)
.+-. +.++.++.-++.++|.+.|++. +..+ ++.-+.+.|.+.|. ..... +.++|.+.|
T Consensus 323 al~~--~~~~~~~~~~~~~~l~~~L~~~--~~~~-~~~g~~~~i~~~~~----------------~~~~~-~~~~l~~~G 380 (419)
T 2eo5_A 323 VIDI--VKDLLPHVNEIGKIFAEELQGL--ADDV-RGIGLAWGLEYNEK----------------KVRDR-IIGESFKRG 380 (419)
T ss_dssp HHHH--HHHHHHHHHHHHHHHHHHHTTS--SSEE-EEETTEEEEECSCH----------------HHHHH-HHHHHHHTT
T ss_pred HHHH--HHHHHHHHHHHHHHHHHHHHHh--hhhe-EeeeEEEEEEEecC----------------ccHHH-HHHHHHHCC
Confidence 3311 2236677778889999999875 2111 23344555554210 01234 888888889
Q ss_pred cEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 228 VIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 228 ~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
.++.... ..++|+++ +..+++++++.+++.|+++.++
T Consensus 381 v~v~~~~----~~~lRis~-~~~~t~e~i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 381 LLLLPAG----RSAIRVIP-PLVISEEEAKQGLDILKKVIKV 417 (419)
T ss_dssp EECEEET----TTEEEECC-CTTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEecCC----CCEEEEEC-CCCCCHHHHHHHHHHHHHHHHh
Confidence 7554432 45799943 5567899999999999887654
No 419
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=96.01 E-value=0.014 Score=61.51 Aligned_cols=68 Identities=4% Similarity=-0.088 Sum_probs=48.3
Q ss_pred eeeeHHHHH----hhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-----
Q psy13453 20 LIYESFKAT----HSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS----- 90 (764)
Q Consensus 20 ~~YSv~KAa----~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~----- 90 (764)
.|.+...++ ...|... +.+|+ +|+++|+++|+++ +-+++.+.++.++|.+-|++++++
T Consensus 46 ~~~~~~~~~~~~~~~~g~~~---~~~~~-----~d~~~l~~~i~~~-----~~~v~~~~~~nptG~~~~~~~i~~~~~~~ 112 (331)
T 1pff_A 46 LYGCTHALFEHQLRKFGVEV---DFIDM-----AVPGNIEKHLKPN-----TRIVYFETPANPTLKVIDIEDAVKQARKQ 112 (331)
T ss_dssp CCHHHHHHHHTHHHHTTCEE---EEECT-----TSTTHHHHTCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHTTS
T ss_pred CcchHHHHHHHHHHhcCCEE---EEeCC-----CCHHHHHHhhcCC-----CeEEEEECCCCCcCcccCHHHHHHHHhhh
Confidence 344555554 4467655 77776 4888999988642 224456788999999999998764
Q ss_pred -CCCceecccc
Q psy13453 91 -NGPLKVGGVL 100 (764)
Q Consensus 91 -~~wlHVDa~l 100 (764)
++++++|++.
T Consensus 113 ~~~~li~D~a~ 123 (331)
T 1pff_A 113 KDILVIVDNTF 123 (331)
T ss_dssp SSCEEEEECTT
T ss_pred cCCEEEEECCC
Confidence 5788999954
No 420
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=96.00 E-value=0.074 Score=58.49 Aligned_cols=216 Identities=9% Similarity=-0.026 Sum_probs=123.0
Q ss_pred eeeeHHHHHhhcCCC-------CCCeEEecCCCC--CcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccC---chh
Q psy13453 20 LIYESFKATHSLSGT-------PDQVRLSGLPDS--EWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQS---LNA 87 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~-------~~~v~~Vpvd~~--~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDp---i~~ 87 (764)
.|.++..++...|.. ..+++.+|++++ +..|++++ .++-+++-+.+..++|.+=+ +++
T Consensus 164 ~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~v~l~~p~NPtG~~~~~~~l~~ 233 (449)
T 3qgu_A 164 SYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA----------KRTDIIFFCSPNNPTGAAATRAQLTE 233 (449)
T ss_dssp CCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC----------CCCSEEEEESSCTTTCCCCCHHHHHH
T ss_pred CChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc----------CCCCEEEEeCCCCCCCCcCCHHHHHH
Confidence 567788889999976 012499999854 45554322 12235544478899999844 555
Q ss_pred hhc-----CCCceeccccccc-cc-----e-----------eeeecCCCccc-ccccccc-----ccCCc-------cc-
Q psy13453 88 PVS-----NGPLKVGGVLRRV-YS-----S-----------CLVPRGQKSLR-TTVLFHF-----LFQHW-------QI- 131 (764)
Q Consensus 88 ia~-----~~wlHVDa~l~~~-y~-----s-----------~ll~rd~~~l~-~~~s~~~-----d~~d~-------tl- 131 (764)
+++ ++++.+|.+.... +. + +++..-.+.+- .-+...+ +..+. .+
T Consensus 234 l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 313 (449)
T 3qgu_A 234 LVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWN 313 (449)
T ss_dssp HHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCBHHHHHH
T ss_pred HHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHHHhhhhhhHHHHHH
Confidence 544 8899999864211 00 1 01111111110 0000000 01110 00
Q ss_pred ----CCCCcccHHHHHHHHHHcc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeecccccccccc
Q psy13453 132 ----PLGRRFRALKLWMTLRSYG---LKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNL 204 (764)
Q Consensus 132 ----e~SRr~~ALklWatL~~lG---~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~ 204 (764)
...-....+..+++...+- .+.+.++.++..+..+++.+.|++. ++++..+.....+.+.+. +
T Consensus 314 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~--~------- 383 (449)
T 3qgu_A 314 RVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM-GFSVYGGDDAPYIWVGFP--G------- 383 (449)
T ss_dssp HHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEESSSSSEEEEECT--T-------
T ss_pred HHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCeeEEEEECC--C-------
Confidence 0001234455566655554 3557788888899999999999987 788765444444544431 1
Q ss_pred ccCccCCccHHHHHHHHHHHhc-CcEEEEecee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 205 FGTISFGDNDLNKAVYDRIIAR-KVIYIVKGSF--QDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 205 ~~~~~~~~d~~n~~L~~~L~~~-G~~~vs~t~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
.+ ..++.++|.++ |.++...... .+..++|+++.. ++++++.+++.|+++.
T Consensus 384 -------~~--~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~---~~e~i~~~l~~l~~~~ 437 (449)
T 3qgu_A 384 -------KP--SWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFG---SRENILEAVRRFKEAY 437 (449)
T ss_dssp -------SC--HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS---CHHHHHHHHHHHHHHH
T ss_pred -------CC--HHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecC---CHHHHHHHHHHHHHHH
Confidence 01 24677777775 8754433322 345789998654 7899999999998765
No 421
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=96.00 E-value=0.028 Score=61.75 Aligned_cols=107 Identities=18% Similarity=0.137 Sum_probs=66.3
Q ss_pred HHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHH
Q psy13453 141 KLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQD----DRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLN 216 (764)
Q Consensus 141 klWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~----p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n 216 (764)
...++|+.+..+ ++.++..++++++.+.|++. |.+..+ ++.-+++.|.+.... .. ..
T Consensus 309 a~~a~L~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~v~~~~~~-------------~~--~~ 369 (420)
T 2pb2_A 309 VAGAAFDIINTP---EVLQGIHTKRQQFVQHLQAIDEQFDIFSDI-RGMGLLIGAELKPKY-------------KG--RA 369 (420)
T ss_dssp HHHHHHHHHSSH---HHHHHHHHHHHHHHHHHHHHHHHHCCEEEE-EEETTEEEEEECGGG-------------TT--CH
T ss_pred HHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecceEEEEEECCCc-------------hH--HH
Confidence 345556665544 45666677788888888764 333222 234455666553100 00 12
Q ss_pred HHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 217 KAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 217 ~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
.++.++|.+.|..+... +..++|+++ ...+++++++.+++.|+++.+++.
T Consensus 370 ~~l~~~l~~~Gi~v~~~----~~~~iRl~~-~~~~t~eei~~~~~~l~~~l~~~~ 419 (420)
T 2pb2_A 370 RDFLYAGAEAGVMVLNA----GADVMRFAP-SLVVEEADIHEGMQRFAQAVGKVV 419 (420)
T ss_dssp HHHHHHHHHTTEECEES----STTEEEECC-CTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEeC----CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHh
Confidence 46888888888654332 246899964 346789999999999999876653
No 422
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=95.97 E-value=0.0066 Score=65.49 Aligned_cols=211 Identities=9% Similarity=-0.017 Sum_probs=119.5
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC--CCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCch---hhhc---
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP--DSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLN---APVS--- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd--~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~---~ia~--- 90 (764)
.+.++..++...|... +.+|++ +++.+|+++|+++|++. ...+.+ +-+.++.++|.+=|.+ ++++
T Consensus 126 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~ 199 (394)
T 2ay1_A 126 TWPNHVSIMNFMGLPV---QTYRYFDAETRGVDFEGMKADLAAA---KKGDMVLLHGCCHNPTGANLTLDQWAEIASILE 199 (394)
T ss_dssp CCHHHHHHHHHHTCCE---EEEECEETTTTEECHHHHHHHHHTC---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CChhHHHHHHHcCCce---EEEecccccCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 4567788889999876 899996 67899999999999753 112344 5677888999885544 4443
Q ss_pred --CCCceeccccccc-cc----------------eee-eecCCCccc-cccccccccC---Cc--------cc-----CC
Q psy13453 91 --NGPLKVGGVLRRV-YS----------------SCL-VPRGQKSLR-TTVLFHFLFQ---HW--------QI-----PL 133 (764)
Q Consensus 91 --~~wlHVDa~l~~~-y~----------------s~l-l~rd~~~l~-~~~s~~~d~~---d~--------tl-----e~ 133 (764)
++++++|...... ++ ..+ +..-.+.+- .-+...+-+. +. .+ ..
T Consensus 200 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~ 279 (394)
T 2ay1_A 200 KTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQT 279 (394)
T ss_dssp HHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTT
T ss_pred HCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhh
Confidence 8899999864211 10 011 111111111 0000000000 00 00 00
Q ss_pred CCcccHHHHHHHHHHc--c------HHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEeCCCCceeEEEEeecccccccc
Q psy13453 134 GRRFRALKLWMTLRSY--G------LKGLQAYLRKHISLAKKFADLVEQDD---RFELVCPPSMGLVCFRLKVRFWDKLD 202 (764)
Q Consensus 134 SRr~~ALklWatL~~l--G------~eGy~~~i~~~i~lA~~l~~~I~~~p---~~ell~~P~l~iV~Fry~P~~~~~~~ 202 (764)
.-....+..+++...+ + .+.+.++.++..+..+++.+.+++.. ++++. .|..+...|-
T Consensus 280 ~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~g~~~~~---------- 348 (394)
T 2ay1_A 280 YSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFV-AEHRGMFSRL---------- 348 (394)
T ss_dssp TSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHH-HHCCSSEEEC----------
T ss_pred cCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEE-cCCceEEEee----------
Confidence 0011334444444333 2 24667777777888888988888753 35543 2333444441
Q ss_pred ccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 203 NLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 203 ~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
+.+ ...+.+.+.+.|..+.. .+|+++. .+++++++.+++.|++++
T Consensus 349 --------~~~--~~~~~~~l~~~gi~v~~--------~~Ris~~--~~~~~~i~~~~~~l~~~~ 393 (394)
T 2ay1_A 349 --------GAT--PEQVKRIKEEFGIYMVG--------DSRINIA--GLNDNTIPILARAIIEVG 393 (394)
T ss_dssp --------CCC--HHHHHHHHHHHCEECCT--------TCEEEGG--GCCTTTHHHHHHHHHHHT
T ss_pred --------CCC--HHHHHHHHHhCCEEecC--------CCeEEee--cCCHhhHHHHHHHHHHcc
Confidence 111 13466666677864321 2699876 467899999999998763
No 423
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=95.93 E-value=0.018 Score=62.37 Aligned_cols=219 Identities=10% Similarity=-0.019 Sum_probs=109.2
Q ss_pred eeeHHHHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcE-EEEeeCCcccc-cccCchhhhc-----CCC
Q psy13453 21 IYESFKATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPM-CSGYCGRTLHQ-DIQSLNAPVS-----NGP 93 (764)
Q Consensus 21 ~YSv~KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~-~VatAGTT~~G-~iDpi~~ia~-----~~w 93 (764)
||++.+++...|... +.| +|+++|+++ ++ ++-+ ++-..++-++| ...+++++++ +++
T Consensus 111 ~~~~~~~~~~~g~~~---~~v-------~d~~~l~~~-~~-----~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~ 174 (374)
T 2aeu_A 111 HPSIERSCKIVNAKY---FES-------DKVGEILNK-ID-----KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAI 174 (374)
T ss_dssp CTHHHHHHHHTTCEE---EEE-------SCHHHHHTT-CC-----TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCC
T ss_pred cHHHHHHHHHcCcEE---EEe-------CCHHHHHhc-CC-----CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCE
Confidence 567666788888765 555 388998887 32 2335 43456777888 8888988876 899
Q ss_pred ceecccccccc------------c-eeeeecCCCcccccccccc-----cc----CCcccCCCCcccHHHH---HHHHHH
Q psy13453 94 LKVGGVLRRVY------------S-SCLVPRGQKSLRTTVLFHF-----LF----QHWQIPLGRRFRALKL---WMTLRS 148 (764)
Q Consensus 94 lHVDa~l~~~y------------~-s~ll~rd~~~l~~~~s~~~-----d~----~d~tle~SRr~~ALkl---WatL~~ 148 (764)
+++|......+ . .+++..-.+.+.. ....+ +. ..+....+-....+.. -.++..
T Consensus 175 li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g-~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~ 253 (374)
T 2aeu_A 175 VFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEG-PRGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGIYRALKN 253 (374)
T ss_dssp EEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSS-CSCEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHH
T ss_pred EEEECCcccccccccccCCccccCCcEEEecCcccccC-cceEEEEECHHHHHHHHHhhccccCCCCHHHHHHHHHHHHH
Confidence 99999532111 0 1111111121111 00000 00 0000001112222333 333444
Q ss_pred ccHHHHHHHHHHHHHH----HHHHHHHHhcC---CCeEEeCCCCceeEEEEeeccccccccccccCccCCccH-HHHHHH
Q psy13453 149 YGLKGLQAYLRKHISL----AKKFADLVEQD---DRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDND-LNKAVY 220 (764)
Q Consensus 149 lG~eGy~~~i~~~i~l----A~~l~~~I~~~---p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~-~n~~L~ 220 (764)
+..+.+++..++...+ .+++.+.+... +++.+...|.-. +.++...+. ..+. -..++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~-~~~~~~~~~-------------~~~~~~~~~~~ 319 (374)
T 2aeu_A 254 FNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGF-VIKRVYKDD-------------TINIKKLIEIG 319 (374)
T ss_dssp CCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEE-EEEEEESSH-------------HHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceE-EEEeecccc-------------cccccchHHHH
Confidence 4333344444444444 34555555544 456665555432 222211000 0000 012243
Q ss_pred -HHHHhcCcEEEEecee-CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 221 -DRIIARKVIYIVKGSF-QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 221 -~~L~~~G~~~vs~t~l-~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
+.+.+.|.++...... .+..++|++++.+...+.+++.+.+.+++..+++
T Consensus 320 ~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~ 371 (374)
T 2aeu_A 320 FNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMA 371 (374)
T ss_dssp HHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 4444568754332222 2345799999877776667889888888877665
No 424
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=95.77 E-value=0.063 Score=61.22 Aligned_cols=73 Identities=5% Similarity=-0.164 Sum_probs=54.1
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC----CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCch---hhhc--
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP----DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLN---APVS-- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd----~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~---~ia~-- 90 (764)
.|.++..++...|.+. +.+|++ +++.+|+++|+++++.. +-+++-+.++.++|.+=|.+ ++++
T Consensus 202 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~d~~~l~~~l~~~-----~k~v~l~~p~NPtG~~~~~~~l~~l~~la 273 (533)
T 3f6t_A 202 IFTPYLRIPELKDYEL---VEVDLHSYEKNDWEIEPNEIEKLKDPS-----IKALIVVNPTNPTSKEFDTNALNAIKQAV 273 (533)
T ss_dssp CCHHHHTSGGGGGSEE---EEECCCEETTTTSEECHHHHHHHSCTT-----EEEEEEESSCTTTCBCCCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCeE---EEEEecCCcccCCCCCHHHHHHHhCCC-----CeEEEEeCCCCCCccccCHHHHHHHHHHH
Confidence 5677788888888876 899985 46899999999988642 22444557888999986555 4443
Q ss_pred ----CCCceecccc
Q psy13453 91 ----NGPLKVGGVL 100 (764)
Q Consensus 91 ----~~wlHVDa~l 100 (764)
++++++|.+.
T Consensus 274 ~~~~~~~li~De~y 287 (533)
T 3f6t_A 274 EKNPKLMIISDEVY 287 (533)
T ss_dssp HHCTTCEEEEECTT
T ss_pred HhCCCCEEEEcCCc
Confidence 6888999853
No 425
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=95.74 E-value=0.13 Score=56.30 Aligned_cols=216 Identities=7% Similarity=-0.143 Sum_probs=110.0
Q ss_pred EEecCCCCCcc-----cHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccC----chhhhc-----CCCceeccccccc
Q psy13453 39 RLSGLPDSEWL-----AYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQS----LNAPVS-----NGPLKVGGVLRRV 103 (764)
Q Consensus 39 ~~Vpvd~~~rm-----D~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDp----i~~ia~-----~~wlHVDa~l~~~ 103 (764)
+.+|.+..+.- |+++|+++|++. ....+.+ +......+.|.+-| ++++++ ++++++|......
T Consensus 170 ~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~ 247 (439)
T 3dxv_A 170 YPDPYRPYRNDPTGDAILTLLTEKLAAV--PAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGL 247 (439)
T ss_dssp CCCSSSCBTTBTTSHHHHHHHHHHHHTS--CTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCT
T ss_pred EEcCCCcccccccHHHHHHHHHHHHHhc--CCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 44565543333 899999999521 1122334 45555566788877 777765 8899999754311
Q ss_pred -c-c---eee---eecCCCcccccccc----c--------cc-cCCcccCCCCcccHHHHHHHHHHccHHHHHHHHHHHH
Q psy13453 104 -Y-S---SCL---VPRGQKSLRTTVLF----H--------FL-FQHWQIPLGRRFRALKLWMTLRSYGLKGLQAYLRKHI 162 (764)
Q Consensus 104 -y-~---s~l---l~rd~~~l~~~~s~----~--------~d-~~d~tle~SRr~~ALklWatL~~lG~eGy~~~i~~~i 162 (764)
+ + .+- +..+--++...+.. . .+ +.......+- ...+.+.+++..+-.-.-.+++++..
T Consensus 248 g~~g~~~~~~~~~~~~di~s~sK~~~~G~riG~~~~~~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~ 326 (439)
T 3dxv_A 248 ARSGRLHCFEHEGFVPDILVLGKGLGGGLPLSAVIAPAEILDCASAFAMQTLH-GNPISAAAGLAVLETIDRDDLPAMAE 326 (439)
T ss_dssp TTTSSSSGGGGTTCCCSEEEECGGGGTTSCCEEEEEEHHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred CcCchhhHHHhcCCCCCEEEEcchhcCCcceEEEEECHHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 0 0 000 00000011111110 0 01 1111111222 44555555444332111134555566
Q ss_pred HHHHHHHHHHhc----CCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCC
Q psy13453 163 SLAKKFADLVEQ----DDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQD 238 (764)
Q Consensus 163 ~lA~~l~~~I~~----~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g 238 (764)
++.+++.+.+++ .+.+..+ ++.-+.+.|.+...... .........++.++|.++|.++.... .+
T Consensus 327 ~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~ 394 (439)
T 3dxv_A 327 RKGRLLRDGLSELAKRHPLIGDI-RGRGLACGMELVCDRQS---------REPARAETAKLIYRAYQLGLVVYYVG--MN 394 (439)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEEEEETTT---------TEECHHHHHHHHHHHHHHTEECEEES--TT
T ss_pred HHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEEecCccc---------cCCCHHHHHHHHHHHHHCCcEEeecC--CC
Confidence 666666666654 4544332 23344555655321100 00112234678888888897554432 23
Q ss_pred eeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 239 RLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 239 ~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
..++|+++ +..+++++++.+++.|+++.+++
T Consensus 395 ~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~~ 425 (439)
T 3dxv_A 395 GNVLEFTP-PLTITETDIHKALDLLDRAFSEL 425 (439)
T ss_dssp SCEEEECC-CTTCCHHHHHHHHHHHHHHHHTG
T ss_pred CCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHH
Confidence 46899854 44567999999999999887654
No 426
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=95.68 E-value=0.019 Score=62.38 Aligned_cols=213 Identities=8% Similarity=-0.021 Sum_probs=122.8
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecC-C-CCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccC---chhhhc---
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGL-P-DSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQS---LNAPVS--- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpv-d-~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDp---i~~ia~--- 90 (764)
.+.++..+++.+|... +.+|+ + +++.+|+++|+++|++.. ...++ +-+.++.++|.+=+ +.++++
T Consensus 133 ~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~ 206 (412)
T 1yaa_A 133 TWANHMAIFENQGLKT---ATYPYWANETKSLDLNGFLNAIQKAP---EGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIA 206 (412)
T ss_dssp CCTTHHHHHHTTTCCE---EEEECEETTTTEECHHHHHHHHHHSC---TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CCccHHHHHHHcCceE---EEEeeecCCCCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 4567888899999876 89998 5 378999999999997631 12355 45889999999854 444543
Q ss_pred --CCCceeccccccc-cc-------ee-------------e-eecCCCcccc-cccccccc--C-----Ccc--------
Q psy13453 91 --NGPLKVGGVLRRV-YS-------SC-------------L-VPRGQKSLRT-TVLFHFLF--Q-----HWQ-------- 130 (764)
Q Consensus 91 --~~wlHVDa~l~~~-y~-------s~-------------l-l~rd~~~l~~-~~s~~~d~--~-----d~t-------- 130 (764)
++++++|...... ++ ++ + +..-.+.+-. -+...+-+ . +..
T Consensus 207 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~ 286 (412)
T 1yaa_A 207 SKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQ 286 (412)
T ss_dssp HTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHH
T ss_pred HCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHH
Confidence 7899999864211 11 10 0 0000111100 00000111 1 100
Q ss_pred ----cCC-CCcccHHHHHHHHHHc--c------HHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEeCCCCceeEEEEee
Q psy13453 131 ----IPL-GRRFRALKLWMTLRSY--G------LKGLQAYLRKHISLAKKFADLVEQDD---RFELVCPPSMGLVCFRLK 194 (764)
Q Consensus 131 ----le~-SRr~~ALklWatL~~l--G------~eGy~~~i~~~i~lA~~l~~~I~~~p---~~ell~~P~l~iV~Fry~ 194 (764)
... .-....+..+++...+ + .+.+.++.++..+..+++.+.|++.. ++++. .|+.+.++|.
T Consensus 287 l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~-- 363 (412)
T 1yaa_A 287 LAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHI-VNQCGMFSFT-- 363 (412)
T ss_dssp HHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHH-HHCCSSEEEC--
T ss_pred HHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeee-ccCceEEEee--
Confidence 000 0112334444444333 2 24677777888888999999998864 36643 3555555552
Q ss_pred ccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 195 VRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 195 P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
+.+ ...+...+.+.|..+.. .+|+++.. .++++++.+++.|+++.+.
T Consensus 364 ----------------~~~--~~~~~~~l~~~gi~v~~--------~~Ris~~~--~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 364 ----------------GLT--PQMVKRLEETHAVYLVA--------SGRASIAG--LNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp ----------------CCC--HHHHHHHHHHHCEECCT--------TSEEEGGG--CCTTTHHHHHHHHHHHHHH
T ss_pred ----------------CCC--HHHHHHHHHhCCEEecc--------CcEEEEcc--CCHhHHHHHHHHHHHHHHh
Confidence 111 13454455567764321 47998874 4788999999999887653
No 427
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=95.58 E-value=0.025 Score=61.81 Aligned_cols=131 Identities=13% Similarity=0.135 Sum_probs=77.7
Q ss_pred HHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc---------CCCceec
Q psy13453 27 ATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS---------NGPLKVG 97 (764)
Q Consensus 27 Aa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~---------~~wlHVD 97 (764)
++..+|... +.||++ | ++|+++|+++ +-+++-..++.++|.+-|++++++ ++++|+|
T Consensus 113 ~~~~~G~~v---~~v~~~-----d-~~l~~~i~~~-----t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD 178 (393)
T 1n8p_A 113 VANAHGVET---SFTNDL-----L-NDLPQLIKEN-----TKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVD 178 (393)
T ss_dssp TSTTTCSCC---EEESSH-----H-HHHHHHSCSS-----EEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEE
T ss_pred HHHHcCcEE---EEeCCC-----h-HHHHHhcccC-----ceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEe
Confidence 556677776 888886 7 8888888642 224446778889999999999874 5789999
Q ss_pred cccccc-------cc--------------------eeeeecCCCccccccccccccCCcccCCCCcccHHHHHHHHHHcc
Q psy13453 98 GVLRRV-------YS--------------------SCLVPRGQKSLRTTVLFHFLFQHWQIPLGRRFRALKLWMTLRSYG 150 (764)
Q Consensus 98 a~l~~~-------y~--------------------s~ll~rd~~~l~~~~s~~~d~~d~tle~SRr~~ALklWatL~~lG 150 (764)
+..... ++ ++++.++++.... +....-..+-+...+..|+.++.+
T Consensus 179 ~a~~~~~~~~~~~~~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~-------l~~~~~~~g~~~~~~~~~~~~~~l- 250 (393)
T 1n8p_A 179 NTFLSPYISNPLNFGADIVVHSATKYINGHSDVVLGVLATNNKPLYER-------LQFLQNAIGAIPSPFDAWLTHRGL- 250 (393)
T ss_dssp CTTTHHHHCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHH-------HHHHHHHHCCCCCHHHHHHHHHHH-
T ss_pred CCccccccCCHHHcCCeEEEEECcccccCCCCceeEEEEeCCHHHHHH-------HHHHHHhcCCCCCHHHHHHHHhcc-
Confidence 953211 00 1222111110000 000000011122345556544433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC-eEE
Q psy13453 151 LKGLQAYLRKHISLAKKFADLVEQDDR-FEL 180 (764)
Q Consensus 151 ~eGy~~~i~~~i~lA~~l~~~I~~~p~-~el 180 (764)
+.+.+++++..+.++++++.+++++. +.-
T Consensus 251 -~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~ 280 (393)
T 1n8p_A 251 -KTLHLRVRQAALSANKIAEFLAADKENVVA 280 (393)
T ss_dssp -TTHHHHHHHHHHHHHHHHHHHTSCTTTEEE
T ss_pred -chHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 44677788888899999999998876 653
No 428
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=95.56 E-value=0.019 Score=63.90 Aligned_cols=62 Identities=8% Similarity=-0.014 Sum_probs=48.3
Q ss_pred cCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEee----CCcccccccCchhhhc-------CCCceeccc
Q psy13453 31 LSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYC----GRTLHQDIQSLNAPVS-------NGPLKVGGV 99 (764)
Q Consensus 31 LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatA----GTT~~G~iDpi~~ia~-------~~wlHVDa~ 99 (764)
+|... +.||+++++++|+++|+++|+++ +-+++... ++..+|.+++++++++ +++++||.+
T Consensus 138 ~G~~~---~~v~~~~~~~~d~e~l~~~l~~~-----tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea 209 (431)
T 3ht4_A 138 YNIGY---NAVPLTEGGLVDFEAVAAAIHSN-----TKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNC 209 (431)
T ss_dssp GTCEE---EECCBCTTSSBCHHHHHHHCCTT-----EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECT
T ss_pred cCCEE---EEeCCCCCCCcCHHHHHhhcCCC-----CeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCC
Confidence 67666 89999989999999999999753 22344443 7888999999999764 689999985
Q ss_pred c
Q psy13453 100 L 100 (764)
Q Consensus 100 l 100 (764)
.
T Consensus 210 ~ 210 (431)
T 3ht4_A 210 Y 210 (431)
T ss_dssp T
T ss_pred C
Confidence 3
No 429
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=95.55 E-value=0.044 Score=60.98 Aligned_cols=155 Identities=11% Similarity=0.013 Sum_probs=89.6
Q ss_pred HHHhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEee----CCcccccccCchhhhc-------CCCc
Q psy13453 26 KATHSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYC----GRTLHQDIQSLNAPVS-------NGPL 94 (764)
Q Consensus 26 KAa~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatA----GTT~~G~iDpi~~ia~-------~~wl 94 (764)
+.+...|+.. +.||+ +++.+|+++|+++|++.. ++-+++... ++-++|.+.|++++++ ++++
T Consensus 143 ~~l~~~G~~~---~~v~~-~~~~~d~e~l~~~i~~~~---~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~l 215 (427)
T 3hvy_A 143 GSLREYGVKY---KMVDL-KDGKVDINTVKEELKKDD---SIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIV 215 (427)
T ss_dssp CCTGGGTCEE---EECCC-BTTBCCHHHHHHHHHHCT---TEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEE
T ss_pred hHHHHcCCEE---EEecC-CCCCcCHHHHHHHhhCCC---CCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEE
Confidence 4455567766 88888 789999999999998410 122444333 7889999999999774 6899
Q ss_pred eecccccccc---------ceeeeecCCCccccc------cc-cccc------c--CCcccC--CCCcccHHHHHHHHHH
Q psy13453 95 KVGGVLRRVY---------SSCLVPRGQKSLRTT------VL-FHFL------F--QHWQIP--LGRRFRALKLWMTLRS 148 (764)
Q Consensus 95 HVDa~l~~~y---------~s~ll~rd~~~l~~~------~s-~~~d------~--~d~tle--~SRr~~ALklWatL~~ 148 (764)
+||.+..... +-++...-.+.+... +- ...+ . ...++. ++=.+. ..|+.++
T Consensus 216 ivD~a~~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~--~a~~~~~- 292 (427)
T 3hvy_A 216 FVDNCYGEFVEEKEPTDVGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGECGSTFG--VMRSLYE- 292 (427)
T ss_dssp EEECTTCTTTSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTT--CHHHHHH-
T ss_pred EEECCccccccCCCCcccCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcccccCCCHH--HHHHHHH-
Confidence 9998642211 012222222222110 00 0000 0 011111 111111 1344443
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCce-----eEEEEe
Q psy13453 149 YGLKGLQAYLRKHISLAKKFADLVEQDDRFELVCPPSMG-----LVCFRL 193 (764)
Q Consensus 149 lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~-----iV~Fry 193 (764)
|.+-...++++..+.|+++++.++++ ++++... ... +++|..
T Consensus 293 -gl~~~~~r~~~~~~~a~~la~~L~~~-g~~V~p~-~~~~~~~li~~~~l 339 (427)
T 3hvy_A 293 -GLFMAPHVTIEAVKGAVFCARIMELA-GFDVLPK-YNDKRTDIIQAIKF 339 (427)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEESC-TTSCCSSSEEEEEC
T ss_pred -hHhHHHHHHHHHHHHHHHHHHHHHhC-CCeecCC-CCCCCceEEEEEeC
Confidence 44556689999999999999999987 4677433 333 777765
No 430
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=95.31 E-value=0.13 Score=55.36 Aligned_cols=109 Identities=10% Similarity=-0.037 Sum_probs=61.0
Q ss_pred ccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEeCCCCceeEEEEeeccccccccccccCccCCc
Q psy13453 137 FRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQ----DDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGD 212 (764)
Q Consensus 137 ~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~----~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~ 212 (764)
...+...+++..+-.-.-.+.+++..++.+++.+.+++ +|.+..+ ++.-+.+.|.+.. ..
T Consensus 281 ~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~---------------~~ 344 (395)
T 3nx3_A 281 GNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKR-KGLGFMQGLSLDK---------------SV 344 (395)
T ss_dssp CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEECT---------------TS
T ss_pred CCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EeEEEEEEEEeCC---------------cc
Confidence 34454444443332111124445555555666655554 4544432 2233455555421 00
Q ss_pred cHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 213 NDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 213 d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
-..++.++|.++|..+... +..++|++ .+..+++++++++++.|+++.+
T Consensus 345 --~~~~~~~~l~~~Gi~v~~~----~~~~iRi~-~~~~~t~e~i~~~l~~l~~~l~ 393 (395)
T 3nx3_A 345 --KVAKVIQKCQENALLLISC----GENDLRFL-PPLILQKEHIDEMSEKLRKALK 393 (395)
T ss_dssp --CHHHHHHHHHHTTEECEEE----TTTEEEEC-CCTTCCHHHHHHHHHHHHHHHH
T ss_pred --hHHHHHHHHHHCCCEEecC----CCCEEEEE-CCCCCCHHHHHHHHHHHHHHHH
Confidence 1246788888899754433 35689984 3556689999999999988754
No 431
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=95.23 E-value=0.23 Score=58.74 Aligned_cols=241 Identities=11% Similarity=0.031 Sum_probs=130.2
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCCC-CCc----c-----cHHHHHHHHHHHhhCCCCc-EEEEeeCCcccccccCchhh
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLPD-SEW----L-----AYLTLRTIYESFRKSFLCP-MCSGYCGRTLHQDIQSLNAP 88 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd~-~~r----m-----D~~aLe~~I~~~~~~G~~p-~~VatAGTT~~G~iDpi~~i 88 (764)
.|.|+..++.+.|... +.++.+. ++. + |+++|+++|+++... +.| ++|.|-+ +++|.+-|++++
T Consensus 244 ~H~S~~~~l~lsGa~p---v~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~-k~p~~vivt~p-n~~G~v~dl~~I 318 (715)
T 3n75_A 244 CHKSLTHLMMMSDVTP---IYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNA-TWPVHAVITNS-TYDGLLYNTDFI 318 (715)
T ss_dssp CCHHHHHHHHHSCCEE---EEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTTC-CSCSEEEEESS-CTTSEEECHHHH
T ss_pred ccHHHHHHHHHcCCEE---EEEeccccccccccCcccccCCHHHHHHHHhhCcCc-cCceEEEEECC-CCCCccCCHHHH
Confidence 6899999999999887 8888753 333 3 999999999975321 123 4566667 889999999998
Q ss_pred hc--CC-Cceeccccccc--cce------ee------------eecCCCcccccccc----cc--cc-------CCcccC
Q psy13453 89 VS--NG-PLKVGGVLRRV--YSS------CL------------VPRGQKSLRTTVLF----HF--LF-------QHWQIP 132 (764)
Q Consensus 89 a~--~~-wlHVDa~l~~~--y~s------~l------------l~rd~~~l~~~~s~----~~--d~-------~d~tle 132 (764)
++ +. +++||.++..- +.. .+ ...-.+++.. ++. +. +. .-..++
T Consensus 319 ~ela~~~~livDEAH~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~g-ltqgs~i~v~~~i~~~~~~~~~~~~~ 397 (715)
T 3n75_A 319 KKTLDVKSIHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAA-FSQASMIHVKGDVNEETFNEAYMMHT 397 (715)
T ss_dssp HHHCCCSEEEEECTTCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSC-CTTCEEEEEESCCCHHHHHHHHHHTS
T ss_pred HHHhCcCcEEEccccccccccCCccccccccccCcCCCEEEEEEecccccccC-CCCeeEEEeCchhhHHHHHHHHHhhc
Confidence 86 22 36889865311 110 00 0110111110 000 00 00 000122
Q ss_pred CCCcccHH--HHHHHHHHccH-HHHHHHHHHHHHHHHHHHHHHhcCCC------eEEeCCCCce-eEEEEeeccc-ccc-
Q psy13453 133 LGRRFRAL--KLWMTLRSYGL-KGLQAYLRKHISLAKKFADLVEQDDR------FELVCPPSMG-LVCFRLKVRF-WDK- 200 (764)
Q Consensus 133 ~SRr~~AL--klWatL~~lG~-eGy~~~i~~~i~lA~~l~~~I~~~p~------~ell~~P~l~-iV~Fry~P~~-~~~- 200 (764)
.|-..-.+ .+=++++.+-. +| .++.++.++++++|++.|+++++ |+++.+..+. .-||...|.. +.+
T Consensus 398 STSpsy~~~AsldaA~~~~~~~~g-~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf 476 (715)
T 3n75_A 398 TTSPHYGIVASTETAAAMMKGNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGF 476 (715)
T ss_dssp CSSCCHHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCC
T ss_pred CCCchHHHHHHHHHHHHHHHhhcc-HHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccc
Confidence 22222222 33334444432 34 44789999999999999998864 7888765432 2244433210 000
Q ss_pred ---------cccc------ccCccCC---ccHHH-HHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHH
Q psy13453 201 ---------LDNL------FGTISFG---DNDLN-KAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWN 261 (764)
Q Consensus 201 ---------~~~~------~~~~~~~---~d~~n-~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~ 261 (764)
.+.. .+....+ ..-++ ..+.+.|.+.|. .+-.+.. +.+= ++.++-.++++++.+++
T Consensus 477 ~~~~~~~~~~Dp~Kl~i~~~~~~~~G~~~~~Gi~g~~~~~~L~~~~I-~~E~~d~---~~vl-~l~s~g~~~~~~~~L~~ 551 (715)
T 3n75_A 477 KNIDNEHMYLDPIKVTLLTPGMEKDGTMSDFGIPASIVAKYLDEHGI-VVEKTGP---YNLL-FLFSIGIDKTKALSLLR 551 (715)
T ss_dssp TTCCSSSEEECTTEEEEECSCBCTTSCBCSSCCCHHHHHHHHHHTTC-CCSEEET---TEEE-EECCTTCCHHHHHHHHH
T ss_pred cccccCcccCCCeEEEEEcCCCCCCCccccCCCcHHHHHHHHHHCCC-EEEecCC---CcEE-EEeCCCCCHHHHHHHHH
Confidence 0000 0000000 00122 356677766664 1112112 2222 25778889999999999
Q ss_pred HHHHHHHHHHc
Q psy13453 262 EIRTATEEVLR 272 (764)
Q Consensus 262 ~l~~~~~~i~~ 272 (764)
.+.++.+...+
T Consensus 552 aL~~~~~~~~~ 562 (715)
T 3n75_A 552 ALTDFKRAFDL 562 (715)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHhhc
Confidence 99988766543
No 432
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=95.18 E-value=0.083 Score=58.47 Aligned_cols=104 Identities=12% Similarity=-0.018 Sum_probs=64.4
Q ss_pred HHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe--CCCCceeEEEEeeccccccccccccCccCCccHHHHH
Q psy13453 141 KLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELV--CPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKA 218 (764)
Q Consensus 141 klWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell--~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~ 218 (764)
...++++.+..+ ++.++..++++++.+.+++. ++.++ .++.-+++.+.+.... +.+ ..+
T Consensus 332 aa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~g~~~~v~l~~~~-------------~~~--~~~ 392 (439)
T 2oat_A 332 VAIAALEVLEEE---NLAENADKLGIILRNELMKL-PSDVVTAVRGKGLLNAIVIKETK-------------DWD--AWK 392 (439)
T ss_dssp HHHHHHHHHHHT---THHHHHHHHHHHHHHHHTTS-CTTTEEEEEEETTEEEEEECCCS-------------SCC--HHH
T ss_pred HHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHh-cCCCcEEEEeeeeEEEEEEecCc-------------cHH--HHH
Confidence 345566665443 45677778899999999885 22211 1223344555442100 011 247
Q ss_pred HHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 219 VYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 219 L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
+.++|.++|..+.. .+..++|+++ +..+++++++++++.|+++.+
T Consensus 393 l~~~l~~~Gv~v~~----~~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~ 437 (439)
T 2oat_A 393 VCLRLRDNGLLAKP----THGDIIRFAP-PLVIKEDELRESIEIINKTIL 437 (439)
T ss_dssp HHHHHHHTTEECCB----SSSSEEEECC-CTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCeEEec----CCCCEEEEEC-ccCCCHHHHHHHHHHHHHHHH
Confidence 88888888874332 2356899964 446789999999999988754
No 433
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=95.00 E-value=0.014 Score=62.96 Aligned_cols=210 Identities=8% Similarity=-0.046 Sum_probs=120.0
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC--CCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCc---hhhhc---
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP--DSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSL---NAPVS--- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd--~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi---~~ia~--- 90 (764)
.+.+...++..+|... +.+|++ +++.+|+++|+++|++.. ..+.+ +-+.++.++|.+=|. +++++
T Consensus 129 ~y~~~~~~~~~~g~~~---~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~ 202 (396)
T 2q7w_A 129 SWPNHKSVFNSAGLEV---REYAYYDAENHTLDFDALINSLNEAQ---AGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSV 202 (396)
T ss_dssp CCTHHHHHHHHTTCEE---EEEECEETTTTEECHHHHHHHHTTCC---TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CchhHHHHHHHcCCce---EEEecccCCCCCcCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 4567888899999876 889996 678999999999997531 12344 568888899998544 44543
Q ss_pred --CCCceeccccccc-cc------e-----------eeeecCCCccc-cccccccccC---Cc----cc---------CC
Q psy13453 91 --NGPLKVGGVLRRV-YS------S-----------CLVPRGQKSLR-TTVLFHFLFQ---HW----QI---------PL 133 (764)
Q Consensus 91 --~~wlHVDa~l~~~-y~------s-----------~ll~rd~~~l~-~~~s~~~d~~---d~----tl---------e~ 133 (764)
++++++|...... ++ + +++..-.+.+- .-+...+-+. +. .+ ..
T Consensus 203 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (396)
T 2q7w_A 203 EKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRAN 282 (396)
T ss_dssp HHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTT
T ss_pred HCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhc
Confidence 8899999863211 10 0 01111111111 0000000000 00 00 00
Q ss_pred CCcccHHHHHHHHHHcc--------HHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEeCCCCceeEEEEeecccccccc
Q psy13453 134 GRRFRALKLWMTLRSYG--------LKGLQAYLRKHISLAKKFADLVEQDD---RFELVCPPSMGLVCFRLKVRFWDKLD 202 (764)
Q Consensus 134 SRr~~ALklWatL~~lG--------~eGy~~~i~~~i~lA~~l~~~I~~~p---~~ell~~P~l~iV~Fry~P~~~~~~~ 202 (764)
.-....+..+++...+. .+.+.++.++..+..+++.+.+++.. ++++. .|+.+...|-
T Consensus 283 ~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~---------- 351 (396)
T 2q7w_A 283 YSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFI-IKQNGMFSFS---------- 351 (396)
T ss_dssp TSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHH-HHCCSSEEEC----------
T ss_pred cCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccee-cCCCceEEEe----------
Confidence 11124455555555543 24666677777888889999998864 35543 3454555441
Q ss_pred ccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 203 NLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 203 ~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
+.+ ...+.+.+.+.|..+.. .+|+++.. .++++++.+++.|+++
T Consensus 352 --------~~~--~~~~~~~l~~~gv~v~~--------~~Ris~~~--~~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 352 --------GLT--KEQVLRLREEFGVYAVA--------SGRVNVAG--MTPDNMAPLCEAIVAV 395 (396)
T ss_dssp --------CCC--HHHHHHHHHHHCEECCT--------TCEEEGGG--CCTTTHHHHHHHHHHH
T ss_pred --------cCC--HHHHHHHHHhcCeeecC--------CceEEEee--cCHHHHHHHHHHHHhc
Confidence 111 13456666677864321 26998874 3788999999988764
No 434
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=94.92 E-value=0.39 Score=52.87 Aligned_cols=105 Identities=10% Similarity=-0.058 Sum_probs=64.6
Q ss_pred HHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHH
Q psy13453 141 KLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQD----DRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLN 216 (764)
Q Consensus 141 klWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~----p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n 216 (764)
...++|+.+-.+ ++.++..++++++.+.|++. +.+..+ ++.-+++.|.+... ..+ .
T Consensus 321 aa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~-~~~g~~~~i~~~~~--------------~~~--~ 380 (433)
T 1z7d_A 321 ICVEALNVLINE---KLCENAEKLGGPFLENLKRELKDSKIVRDV-RGKGLLCAIEFKNE--------------LVN--V 380 (433)
T ss_dssp HHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHTTCTTEEEE-EEETTEEEEEECTT--------------TCC--H
T ss_pred HHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EeeeeEEEEEEccC--------------hhH--H
Confidence 335556555443 45666677888888888753 322221 23334555554310 001 2
Q ss_pred HHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 217 KAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 217 ~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
.++.++|.++|.++... +..++|+++ +..+++++++.+++.|+++.+++
T Consensus 381 ~~~~~~l~~~Gv~v~~~----~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~~ 429 (433)
T 1z7d_A 381 LDICLKLKENGLITRDV----HDKTIRLTP-PLCITKEQLDECTEIIVKTVKFF 429 (433)
T ss_dssp HHHHHHHHHTTEECCEE----TTTEEEECC-CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCeEEecC----CCCEEEEEC-CcCCCHHHHHHHHHHHHHHHHHH
Confidence 47888888888744322 346899954 44678999999999999887665
No 435
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=94.87 E-value=0.87 Score=50.27 Aligned_cols=203 Identities=11% Similarity=-0.012 Sum_probs=107.9
Q ss_pred CeEEecCCC--CC--------cccHHHHHHHHHHHhhCCCCcEEE-EeeCCcccccccC----chhhhc-----CCCcee
Q psy13453 37 QVRLSGLPD--SE--------WLAYLTLRTIYESFRKSFLCPMCS-GYCGRTLHQDIQS----LNAPVS-----NGPLKV 96 (764)
Q Consensus 37 ~v~~Vpvd~--~~--------rmD~~aLe~~I~~~~~~G~~p~~V-atAGTT~~G~iDp----i~~ia~-----~~wlHV 96 (764)
.++.+|.++ .. ..|+++|+++|++.. ..+.+| ..--..++|.+=| ++++.+ ++++++
T Consensus 194 ~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~ 270 (449)
T 2cjg_A 194 PRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRP---HDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIF 270 (449)
T ss_dssp CEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHST---TTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEE
T ss_pred CcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcC---CceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEE
Confidence 567888765 22 378888999997521 123343 3333355786444 555554 889999
Q ss_pred ccccccc------cc--------eeeeecCCCccccc-cccccccCC--------cccCC-CCcccHHHHH---HHHHHc
Q psy13453 97 GGVLRRV------YS--------SCLVPRGQKSLRTT-VLFHFLFQH--------WQIPL-GRRFRALKLW---MTLRSY 149 (764)
Q Consensus 97 Da~l~~~------y~--------s~ll~rd~~~l~~~-~s~~~d~~d--------~tle~-SRr~~ALklW---atL~~l 149 (764)
|...... ++ -++.+ .+.+.-. +-..-+..+ ....+ +=....+... ++|..+
T Consensus 271 DEv~~g~g~~g~~~~~~~~~~~~di~t~--sK~l~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~ 348 (449)
T 2cjg_A 271 DEVQTGCGLTGTAWAYQQLDVAPDIVAF--GKKTQVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVI 348 (449)
T ss_dssp ECTTTTTTTTSSSSTHHHHTCCCSEEEE--CGGGSSEEEEECGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHH
T ss_pred eccccCCCccCcceeecccCCCceEEEe--cCcccEEEEEECHHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHH
Confidence 9854210 00 01111 0111100 000001111 11111 1123344444 445444
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhc----CCC-eEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHH
Q psy13453 150 GLKGLQAYLRKHISLAKKFADLVEQ----DDR-FELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRII 224 (764)
Q Consensus 150 G~eGy~~~i~~~i~lA~~l~~~I~~----~p~-~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~ 224 (764)
-.+ ++.++.-++.+++.+.|++ .+. +..+ ++.-+++.|.+.. .....++.++|.
T Consensus 349 ~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~~~g~~~~~~~~~-----------------~~~~~~~~~~l~ 407 (449)
T 2cjg_A 349 EAE---GLFERAVQHGKYLRARLDELAADFPAVVLDP-RGRGLMCAFSLPT-----------------TADRDELIRQLW 407 (449)
T ss_dssp HHH---THHHHHHHHHHHHHHHHHHHHHHSTTTSEEE-EEETTEEEEECSS-----------------HHHHHHHHHHHH
T ss_pred Hhc---cHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-eeccEEEEEEECC-----------------hHHHHHHHHHHH
Confidence 343 3455666777788888775 354 4332 2344455564421 112357888888
Q ss_pred hcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 225 ARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 225 ~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
++|.++... +..++|++ .+..+++++++.+++.|+++.+++
T Consensus 408 ~~Gv~v~~~----g~~~iRi~-~~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 408 QRAVIVLPA----GADTVRFR-PPLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp HTTEECEEE----TTTEEEEC-CCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HCCeEEecC----CCCEEEEE-CCCCCCHHHHHHHHHHHHHHHHHh
Confidence 888754432 34689985 355678999999999999887653
No 436
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=94.73 E-value=0.47 Score=52.11 Aligned_cols=106 Identities=7% Similarity=-0.082 Sum_probs=61.9
Q ss_pred HHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe--CCCCceeEEEEeeccccccccccccCccCCccHHHHHHH
Q psy13453 143 WMTLRSYGLKGLQAYLRKHISLAKKFADLVEQDDRFELV--CPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVY 220 (764)
Q Consensus 143 WatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~p~~ell--~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~ 220 (764)
-++|+.+-.+ ++.++..++.+++.+.+++.+++.++ .++.-+++.|.+.... .....-..++.
T Consensus 339 ~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~------------~~~~~~~~~~~ 403 (449)
T 3a8u_X 339 LAALCLLQKE---NLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRD------------GDAIVRPFEAG 403 (449)
T ss_dssp HHHHHHHHHT---THHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBT------------TBSSHHHHHHH
T ss_pred HHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCc------------ccccccHHHHH
Confidence 3444444333 45667777788888888874433221 1233345555543110 00000113578
Q ss_pred HHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 221 DRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 221 ~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
++|.++|.++... + .++|++. ...+++++++.+++.|+++.++
T Consensus 404 ~~l~~~Gv~v~~~----g-~~iRis~-~~~~t~~~i~~~l~~l~~~l~~ 446 (449)
T 3a8u_X 404 MALWKAGFYVRFG----G-DTLQFGP-TFNSKPQDLDRLFDAVGEVLNK 446 (449)
T ss_dssp HHHHHHTEECEEE----T-TEEEECC-CTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCcEEecC----C-CEEEEEC-CCcCCHHHHHHHHHHHHHHHHH
Confidence 8888888754433 2 6799864 2367899999999999988654
No 437
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=94.64 E-value=0.49 Score=51.57 Aligned_cols=103 Identities=11% Similarity=0.005 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHhc----CCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEE
Q psy13453 157 YLRKHISLAKKFADLVEQ----DDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIV 232 (764)
Q Consensus 157 ~i~~~i~lA~~l~~~I~~----~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs 232 (764)
+.++.-++.+++.+.+++ .+.+.. .++.-+.+.|.+....... ........++.++|.++|.++..
T Consensus 326 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~-~~~~g~~~~i~~~~~~~~~---------~~~~~~~~~~~~~l~~~Gv~v~~ 395 (433)
T 1zod_A 326 LVARANVMGDRLRRGLLDLMERFDCIGD-VRGRGLLLGVEIVKDRRTK---------EPADGLGAKITRECMNLGLSMNI 395 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTEEE-EEEETTEEEEEEEEETTTT---------EECTTHHHHHHHHHHHTTEECCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEE-EEEEEEEEEEEEecCcccc---------CCChHHHHHHHHHHHHCCCeEec
Confidence 445555667777777765 354432 2334445556553210000 00012245788888888975443
Q ss_pred eceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 233 KGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 233 ~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
.....+..++|++ .+..+++++++.+++.|+++.+++
T Consensus 396 ~~~~~~~~~lRi~-~~~~~t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 396 VQLPGMGGVFRIA-PPLTVSEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp ECCTTSCCEEEEC-CCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCEEEEE-CCcCCCHHHHHHHHHHHHHHHHHh
Confidence 3322223689984 344568999999999999887654
No 438
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=94.58 E-value=0.11 Score=57.59 Aligned_cols=73 Identities=4% Similarity=-0.136 Sum_probs=53.5
Q ss_pred eeeHHHHHh----hcCCCCCCeEEecC-CCC--CcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCchh---hh
Q psy13453 21 IYESFKATH----SLSGTPDQVRLSGL-PDS--EWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLNA---PV 89 (764)
Q Consensus 21 ~YSv~KAa~----~LGl~~~~v~~Vpv-d~~--~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~~---ia 89 (764)
|.+...+++ ..|... +.+|+ |++ +.+|+++|+++|++.. ..+.+ +-..+..++|.+=+.++ ++
T Consensus 155 ~~~~~~~~~~~~~~~G~~v---~~~~~~~~~~~~~~d~e~l~~~l~~~~---~~~~~v~~~~p~NPtG~~~~~~~l~~i~ 228 (448)
T 3meb_A 155 WPNHYGIYDKVFNKLKVPY---KEYTYLRKDGELEIDFSNTKKDIQSAP---EKSIFLFHACAHNPSGIDFTEAQWKELL 228 (448)
T ss_dssp CTHHHHHHHHHHCTTTSCC---EEECCBCTTSCSSBCHHHHHHHHHHSC---TTCEEEEESSSCTTTCCCCCHHHHHHHH
T ss_pred CHhHHHHHHhhHHhCCCeE---EEEeccccccCCCcCHHHHHHHHHhCC---CCcEEEEeCCCCCCCCcCCCHHHHHHHH
Confidence 455667777 888877 99999 664 8999999999998631 12344 56677889998755444 55
Q ss_pred c-----CCCceeccc
Q psy13453 90 S-----NGPLKVGGV 99 (764)
Q Consensus 90 ~-----~~wlHVDa~ 99 (764)
+ ++++++|.+
T Consensus 229 ~l~~~~~~~li~Dea 243 (448)
T 3meb_A 229 PIMKEKKHIAFFDSA 243 (448)
T ss_dssp HHHHHHTCEEEEEES
T ss_pred HHHHHCCCEEEEecc
Confidence 4 889999885
No 439
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=94.46 E-value=0.41 Score=52.30 Aligned_cols=203 Identities=7% Similarity=-0.061 Sum_probs=101.7
Q ss_pred cHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccC----chhhhc-----CCCceecccccccc-c--------e----
Q psy13453 50 AYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQS----LNAPVS-----NGPLKVGGVLRRVY-S--------S---- 106 (764)
Q Consensus 50 D~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDp----i~~ia~-----~~wlHVDa~l~~~y-~--------s---- 106 (764)
|+++|+++|++... .+.+ +..-...+.|.+-| ++++.+ ++++++|.+..... + +
T Consensus 188 d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~g~~~~~~~~~~~~d 264 (434)
T 3l44_A 188 NVETLKEALDKWGH---EVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRFMYGGAQDLLGVTPD 264 (434)
T ss_dssp CHHHHHHHHHHHGG---GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTSSSSCHHHHHTCCCS
T ss_pred cHHHHHHHHHhCCC---CEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceeccccHHHHHcCCCCC
Confidence 89999999986421 2333 44444445677766 666655 88999998643101 0 0
Q ss_pred eeeecCCCccccccccc--------cccC-C---cccCCCCcccHHHHHHH---HHHccHHHHHHHHHHHHHHHHHHHHH
Q psy13453 107 CLVPRGQKSLRTTVLFH--------FLFQ-H---WQIPLGRRFRALKLWMT---LRSYGLKGLQAYLRKHISLAKKFADL 171 (764)
Q Consensus 107 ~ll~rd~~~l~~~~s~~--------~d~~-d---~tle~SRr~~ALklWat---L~~lG~eGy~~~i~~~i~lA~~l~~~ 171 (764)
++.+ .+.+-.-+... .+.. . ....++-....+.+.++ +..+-. .+++++..++.+++.+.
T Consensus 265 i~t~--sK~~~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~ 339 (434)
T 3l44_A 265 LTAL--GKVIGGGLPIGAYGGKKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ---EGLYEKLDELGATLEKG 339 (434)
T ss_dssp EEEE--EGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHH
T ss_pred eeeh--hhhhcCCcCeeeEEEcHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHH
Confidence 0100 01111000000 0111 1 11222334455544444 443333 34555566666677776
Q ss_pred Hhc----CCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEecc
Q psy13453 172 VEQ----DDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAIC 247 (764)
Q Consensus 172 I~~----~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~ 247 (764)
|++ .+.... .++.-+++.|.+........... .........++.++|.++|.++... +...+|++
T Consensus 340 L~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~Gv~v~~~----~~~~~rl~-- 408 (434)
T 3l44_A 340 ILEQAAKHNIDIT-LNRLKGALTVYFTTNTIEDYDAA----QDTDGEMFGKFFKLMLQEGVNLAPS----KYEAWFLT-- 408 (434)
T ss_dssp HHHHHHHTTCCEE-EEEETTEEEEEESSSCCCSHHHH----HHSCHHHHHHHHHHHHHTTEECCSS----TTCCEECC--
T ss_pred HHHHHHhCCCCEE-EEeeccEEEEEEecCcccchhhc----cccCHHHHHHHHHHHHHCCeEEeec----CCCcEEEe--
Confidence 665 332221 22334455555532111000000 0001123367888999999643221 22356763
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 248 SSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 248 np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
..+++++++++++.|+++.+++.+
T Consensus 409 -~~~t~e~i~~~l~~l~~~l~~~~~ 432 (434)
T 3l44_A 409 -TEHTKEDIEYTIEAVGRAFAALAD 432 (434)
T ss_dssp -TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -cccCHHHHHHHHHHHHHHHHHHHh
Confidence 467899999999999999877654
No 440
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=94.42 E-value=0.44 Score=51.93 Aligned_cols=199 Identities=8% Similarity=-0.085 Sum_probs=106.0
Q ss_pred CeEEecCCC------CCcccHHHHHHHHHHHhhCCCCcEEEEeeC--CcccccccC----chhhhc-----CCCceeccc
Q psy13453 37 QVRLSGLPD------SEWLAYLTLRTIYESFRKSFLCPMCSGYCG--RTLHQDIQS----LNAPVS-----NGPLKVGGV 99 (764)
Q Consensus 37 ~v~~Vpvd~------~~rmD~~aLe~~I~~~~~~G~~p~~VatAG--TT~~G~iDp----i~~ia~-----~~wlHVDa~ 99 (764)
.++.+|++. .+.+|+++|+++|++.. ..+.+|-.-+ .-++|.+=| ++++++ ++++|+|..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~ 247 (429)
T 1s0a_A 171 ENLFAPAPQSRMDGEWDERDMVGFARLMAAHR---HEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEI 247 (429)
T ss_dssp CCEEECCCCSBC-CCCCGGGGHHHHHHHHHHT---TTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECT
T ss_pred CceEeCCCcccccccchHHHHHHHHHHHHhCC---CCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeh
Confidence 457788752 23699999999998531 1234443445 466896544 666665 899999996
Q ss_pred cccc-c-c------------eeeeecCCCccccc-ccccc-----c----cCC---cc--cCCCCcccHHHH---HHHHH
Q psy13453 100 LRRV-Y-S------------SCLVPRGQKSLRTT-VLFHF-----L----FQH---WQ--IPLGRRFRALKL---WMTLR 147 (764)
Q Consensus 100 l~~~-y-~------------s~ll~rd~~~l~~~-~s~~~-----d----~~d---~t--le~SRr~~ALkl---WatL~ 147 (764)
.... + + -++.+ .+.+..- +...+ + +.. .. ..++-....+.. -+++.
T Consensus 248 ~~~~g~~g~~~~~~~~~~~~d~~t~--sK~l~~G~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~ 325 (429)
T 1s0a_A 248 ATGFGRTGKLFACEHAEIAPDILCL--GKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLA 325 (429)
T ss_dssp TTTTTTTSSSSGGGGGTCCCSEEEE--CGGGGTSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHH
T ss_pred hhCCcccchHHHhhhcCCCCCEEEe--cccccCCCccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHH
Confidence 4210 0 0 01111 1111110 01100 0 000 00 011112234433 34444
Q ss_pred HccHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHH
Q psy13453 148 SYGLKGLQAYLRKHISLAKKFADLVEQD---DRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRII 224 (764)
Q Consensus 148 ~lG~eGy~~~i~~~i~lA~~l~~~I~~~---p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~ 224 (764)
.+-.++ ..++..++.+++.+.|++. |++..+ .+.-+++.|.+.. ..+ ..++.++|.
T Consensus 326 ~~~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~~-~~~g~~~~~~~~~---------------~~~--~~~l~~~l~ 384 (429)
T 1s0a_A 326 ILESGD---WQQQVADIEVQLREQLAPARDAEMVADV-RVLGAIGVVETTH---------------PVN--MAALQKFFV 384 (429)
T ss_dssp HHHTCH---HHHHHHHHHHHHHHHHGGGGGCTTEEEE-EEETTEEEEEESS---------------CBC--HHHHHHHHH
T ss_pred HHHhCC---HHHHHHHHHHHHHHHHHHHhcCCCEEEE-EEeeEEEEEEECC---------------ccc--HHHHHHHHH
Confidence 433333 4556667788999988874 555432 2233345554421 011 246778888
Q ss_pred hcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 225 ARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 225 ~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
++|.+... . ..++|+++ ...+++++++.+++.|+++.
T Consensus 385 ~~Gi~v~~---~--~~~iRis~-~~~~t~e~i~~~~~~l~~~~ 421 (429)
T 1s0a_A 385 EQGVWIRP---F--GKLIYLMP-PYIILPQQLQRLTAAVNRAV 421 (429)
T ss_dssp HTTEECCC---B--TTEEEECC-CTTCCHHHHHHHHHHHHHHT
T ss_pred HCCCEEec---c--CCEEEEEC-CCCCCHHHHHHHHHHHHHHH
Confidence 88864322 1 25799863 34568999999999998764
No 441
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=94.35 E-value=0.041 Score=59.78 Aligned_cols=74 Identities=5% Similarity=-0.183 Sum_probs=55.5
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC--CCCcccHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccCchh---hhc---
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP--DSEWLAYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQSLNA---PVS--- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd--~~~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDpi~~---ia~--- 90 (764)
.+.+...+++..|... +.+|++ +++.+|+++|+++|++.. ..+.+ +-+.+..++|.+=+.++ +++
T Consensus 140 ~y~~~~~~~~~~g~~~---~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~ 213 (409)
T 4eu1_A 140 GYPNHESIFAKAGMEL---TPYSYYDPATKGLNLAGMLECLDKAP---EGSVILVHACAHNPTGVDPTHDDWRQVCDVIK 213 (409)
T ss_dssp CCTHHHHHHHHTTCEE---EEECCEETTTTEECHHHHHHHHHHSC---TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CcHhHHHHHHHcCCeE---EEEEeecCcCCcCcHHHHHHHHHhCC---CCcEEEEECCCCCCCCCCCCHHHHHHHHHHHH
Confidence 4566788899999876 999983 578999999999997531 12344 55677889999866444 543
Q ss_pred --CCCceeccc
Q psy13453 91 --NGPLKVGGV 99 (764)
Q Consensus 91 --~~wlHVDa~ 99 (764)
++++++|.+
T Consensus 214 ~~~~~li~De~ 224 (409)
T 4eu1_A 214 RRNHIPFVDMA 224 (409)
T ss_dssp HTTCEEEEEES
T ss_pred hCCcEEEEecc
Confidence 889999986
No 442
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=94.33 E-value=0.15 Score=55.22 Aligned_cols=96 Identities=10% Similarity=0.104 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHh-cCcEEEE
Q psy13453 154 LQAYLRKHISLAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIA-RKVIYIV 232 (764)
Q Consensus 154 y~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~-~G~~~vs 232 (764)
+.++.++..+..+++.+.|++. ++++..+...+.+.+++.|.+. +. .++.++|.+ .|..+..
T Consensus 294 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~------------~~----~~~~~~l~~~~gv~v~~ 356 (400)
T 3asa_A 294 QLEAIHYYRENSDLLRKALLAT-GFEVFGGEHAPYLWVKPTQANI------------SD----RDLFDFFLREYHIAITP 356 (400)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHT-TCEEEECSSSSEEEEECCCTTC------------CT----TTHHHHHHHHHSEECEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCceEEEEeccCCCC------------CH----HHHHHHHHHhCCEEEeC
Confidence 5556677778888999999987 8887754444556665222111 11 245666654 4765544
Q ss_pred ecee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHH
Q psy13453 233 KGSF--QDRLFMRFAICSSQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 233 ~t~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~ 269 (764)
.... .+..++|+++ .+++++++++++.|+++.++
T Consensus 357 g~~f~~~~~~~iRis~---~~~~e~i~~~l~~l~~~~~~ 392 (400)
T 3asa_A 357 GIGFGRSGSGFVRFSS---LGKREDILAACERLQMAPAL 392 (400)
T ss_dssp GGGGCGGGTTCEEEEC---CSCHHHHHHHHHHHHC----
T ss_pred hhHhCCCCCCEEEEEe---eCCHHHHHHHHHHHHHHHHh
Confidence 3322 2346899984 45799999999998877544
No 443
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=94.30 E-value=0.13 Score=56.78 Aligned_cols=138 Identities=13% Similarity=0.061 Sum_probs=79.4
Q ss_pred HhhcCCCCCCeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchhhhc-------CCCceecccc
Q psy13453 28 THSLSGTPDQVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNAPVS-------NGPLKVGGVL 100 (764)
Q Consensus 28 a~~LGl~~~~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ia~-------~~wlHVDa~l 100 (764)
+..+|+.. +.|+.+ |+++|+++|+++ +-+++...++-++|.+-||+++++ ++++|||+..
T Consensus 142 l~~~G~~v---~~v~~~-----d~~~le~ai~~~-----tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~ 208 (415)
T 2fq6_A 142 LSKLGVTT---SWFDPL-----IGADIVKHLQPN-----TKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTW 208 (415)
T ss_dssp GGGGTCEE---EEECTT-----CGGGGGGGCCTT-----EEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTT
T ss_pred HHHcCcEE---EEECCC-----CHHHHHHhhccC-----CcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCC
Confidence 34567665 777664 889999998753 224445677888999999999874 6789999964
Q ss_pred ccccc--------eeeeecCCCccccc-------ccccccc----CCc-ccCCCCcccHHHHHHHHHHccHHHHHHHHHH
Q psy13453 101 RRVYS--------SCLVPRGQKSLRTT-------VLFHFLF----QHW-QIPLGRRFRALKLWMTLRSYGLKGLQAYLRK 160 (764)
Q Consensus 101 ~~~y~--------s~ll~rd~~~l~~~-------~s~~~d~----~d~-tle~SRr~~ALklWatL~~lG~eGy~~~i~~ 160 (764)
...+. -++...-.|.+-.. +...-+. ..+ ...++ ....+..|+.++ |.+.+..++++
T Consensus 209 a~~~~~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G~-~~~~~~a~~~~~--~l~~l~~r~~~ 285 (415)
T 2fq6_A 209 AAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQ-MVDADTAYITSR--GLRTLGVRLRQ 285 (415)
T ss_dssp TTTTSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTC-CCCHHHHHHHHH--HHHHHHHHHHH
T ss_pred cccccCCccccCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcCC-CCCHHHHHHHHh--hhhHHHHHHHH
Confidence 22110 01111111111100 0000000 000 00011 122344565544 45677888999
Q ss_pred HHHHHHHHHHHHhcCCCeEEe
Q psy13453 161 HISLAKKFADLVEQDDRFELV 181 (764)
Q Consensus 161 ~i~lA~~l~~~I~~~p~~ell 181 (764)
..+.++++++.|+++|.+.-+
T Consensus 286 ~~~n~~~l~~~L~~~~~v~~v 306 (415)
T 2fq6_A 286 HHESSLKVAEWLAEHPQVARV 306 (415)
T ss_dssp HHHHHHHHHHHHHTCTTEEEE
T ss_pred HHHHHHHHHHHHHcCCCeeEE
Confidence 999999999999998876544
No 444
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=93.89 E-value=0.93 Score=50.57 Aligned_cols=195 Identities=10% Similarity=-0.039 Sum_probs=101.2
Q ss_pred ccHHHHHHHHHHHhhCCCCcEEE-EeeCCcccccccC----chhhhc-----CCCceecccccc-ccce-ee--------
Q psy13453 49 LAYLTLRTIYESFRKSFLCPMCS-GYCGRTLHQDIQS----LNAPVS-----NGPLKVGGVLRR-VYSS-CL-------- 108 (764)
Q Consensus 49 mD~~aLe~~I~~~~~~G~~p~~V-atAGTT~~G~iDp----i~~ia~-----~~wlHVDa~l~~-~y~s-~l-------- 108 (764)
.|+++|+++|++....+..+-+| ...-..++|.+=| ++++.+ ++++|+|..... .+.+ ++
T Consensus 240 ~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~ 319 (472)
T 1ohv_A 240 RCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLD 319 (472)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCS
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCC
Confidence 47999999998743222123343 3323445897655 777665 899999997421 0100 00
Q ss_pred ----eecCCCc-cccccccccccC---CcccCCCCcccHHHH---HHHHHHccHHHHHHHHHHHHHHHHHHHHHHhcC--
Q psy13453 109 ----VPRGQKS-LRTTVLFHFLFQ---HWQIPLGRRFRALKL---WMTLRSYGLKGLQAYLRKHISLAKKFADLVEQD-- 175 (764)
Q Consensus 109 ----l~rd~~~-l~~~~s~~~d~~---d~tle~SRr~~ALkl---WatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~~-- 175 (764)
+.--.+. +-..+...-++. .....++-.+..+.+ -++|..+-.+ ++.++.-++.++|.+.|++.
T Consensus 320 ~~~Di~t~sK~~l~GG~~~~~~~~~~~~~~~~~T~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~ 396 (472)
T 1ohv_A 320 DPADVMTFSKKMMTGGFFHKEEFRPNAPYRIFNTWLGDPSKNLLLAEVINIIKRE---DLLSNAAHAGKVLLTGLLDLQA 396 (472)
T ss_dssp SCCSEEEECGGGSSEEEEECGGGSCSSSSSSCCSSSSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccccccCCccCchhhcccccccccCccCccHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHh
Confidence 0000111 111111100111 011112223334433 3445544333 34566667777888777653
Q ss_pred --CC-eEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCC
Q psy13453 176 --DR-FELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTE 252 (764)
Q Consensus 176 --p~-~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt 252 (764)
|. +.-+ .+.-.++.|... .+....++.++|.++|...... +...||++ ....++
T Consensus 397 ~~~~~v~~~-~~~g~~~~~~~~-----------------~~~~~~~~~~~l~~~Gv~~~~~----g~~~iRi~-~~~~~t 453 (472)
T 1ohv_A 397 RYPQFISRV-RGRGTFCSFDTP-----------------DESIRNKLISIARNKGVMLGGC----GDKSIRFR-PTLVFR 453 (472)
T ss_dssp HCTTTCEEE-EEETTEEEEECS-----------------SHHHHHHHHHHHHHTTEECEEE----TTTEEEEC-CCTTCC
T ss_pred hCCCcEEee-cCCceEEEEEeC-----------------ChhHHHHHHHHHHHCCeEEecC----CCCEEEEE-CCCCCC
Confidence 43 3211 223334445321 1122357888898899754332 34689995 445568
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy13453 253 ESDVQLGWNEIRTATEE 269 (764)
Q Consensus 253 ~e~i~~~l~~l~~~~~~ 269 (764)
+++++.+++.|+++.++
T Consensus 454 ~e~i~~~~~~l~~~l~~ 470 (472)
T 1ohv_A 454 DHHAHLFLNIFSDILAD 470 (472)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999887654
No 445
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=93.81 E-value=0.071 Score=57.51 Aligned_cols=75 Identities=5% Similarity=-0.208 Sum_probs=53.5
Q ss_pred eeeeHHHHHhhcCCCCCCeEEecCC--CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccc---cCchhhhc----
Q psy13453 20 LIYESFKATHSLSGTPDQVRLSGLP--DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDI---QSLNAPVS---- 90 (764)
Q Consensus 20 ~~YSv~KAa~~LGl~~~~v~~Vpvd--~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~i---Dpi~~ia~---- 90 (764)
.|.+...+++..|... +.+|++ +++.+|+++|++.+++. . .++-+++-+.++-++|.+ +++.++++
T Consensus 132 ~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~d~~~l~~~l~~~-~-~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~ 206 (401)
T 7aat_A 132 SWGNHTPIFRDAGLQL---QAYRYYDPKTCSLDFTGAMEDISKI-P-EKSIILLHACAHNPTGVDPRQEQWKELASVVKK 206 (401)
T ss_dssp CCTTHHHHHHHTTCEE---EEEECEETTTTEECHHHHHHHHTTS-C-TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHcCCee---EeeeeeccccCccCHHHHHHHHHhC-C-CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh
Confidence 4566778888999865 999986 47899999999998762 1 122233566788899955 55666664
Q ss_pred -CCCceeccc
Q psy13453 91 -NGPLKVGGV 99 (764)
Q Consensus 91 -~~wlHVDa~ 99 (764)
++++.+|.+
T Consensus 207 ~~~~li~Dea 216 (401)
T 7aat_A 207 RNLLAYFDMA 216 (401)
T ss_dssp TTCEEEEEES
T ss_pred CCcEEEEccc
Confidence 778877764
No 446
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=93.40 E-value=4.4 Score=44.57 Aligned_cols=126 Identities=12% Similarity=-0.008 Sum_probs=67.4
Q ss_pred cccHHHHHHH---HHHccHHHHHHHHHHHHH-HHHHHHHHHhcCCCeEEeCCCCceeEEEEeeccccccccccccCccCC
Q psy13453 136 RFRALKLWMT---LRSYGLKGLQAYLRKHIS-LAKKFADLVEQDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFG 211 (764)
Q Consensus 136 r~~ALklWat---L~~lG~eGy~~~i~~~i~-lA~~l~~~I~~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~ 211 (764)
....+.+.++ |..+..+.+.+.+++..+ +.+.+.+.+++++.+..+ .+.-+.+.|.+....... . . ...
T Consensus 329 ~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~-~----~-~~~ 401 (460)
T 3gju_A 329 SAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEV-RGDGMLAAVEFVADKDDR-V----F-FDA 401 (460)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEE-EEETTEEEEEECSBTTTT-B----C-CCG
T ss_pred CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-eeeeEEEEEEEccCcccc-c----c-ccc
Confidence 4445544444 443334444444444333 233444555566655433 233334555543211000 0 0 001
Q ss_pred ccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 212 DNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 212 ~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
..+...++.++|.++|.++.... +..++|++. ...+++++++++++.|+++.+++.+
T Consensus 402 ~~~~~~~~~~~l~~~Gv~v~~~~---~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~~~~ 458 (460)
T 3gju_A 402 SQKIGPQVATALAASGVIGRAMP---QGDILGFAP-PLCLTREQADIVVSKTADAVKSVFA 458 (460)
T ss_dssp GGCHHHHHHHHHHHTTEECEECS---SSCEEEECC-CTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHCCeEEecCC---CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 12245678899999997544332 346899842 3356889999999999998877653
No 447
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=93.20 E-value=1.4 Score=49.23 Aligned_cols=122 Identities=10% Similarity=-0.033 Sum_probs=68.3
Q ss_pred cccHHHHHHHHH---HccHHHHHHHHHHHH-HHHHHHHHHHhcC---CCeEEeCCCCceeEEEEeeccccccccccccCc
Q psy13453 136 RFRALKLWMTLR---SYGLKGLQAYLRKHI-SLAKKFADLVEQD---DRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTI 208 (764)
Q Consensus 136 r~~ALklWatL~---~lG~eGy~~~i~~~i-~lA~~l~~~I~~~---p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~ 208 (764)
.+..+.+.+++. .+-.+ +++++.. +..+++.+.|++. |.+..+ .+.-+.+.|.+.+..... . ..
T Consensus 326 ~~np~a~aAa~aaL~~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-r~~G~~~~i~~~~~~~~~--~---~~ 396 (472)
T 3hmu_A 326 SGHPVAAAVALENLRILEEE---NILDHVRNVAAPYLKEKWEALTDHPLVGEA-KIVGMMASIALTPNKASR--A---KF 396 (472)
T ss_dssp TTCHHHHHHHHHHHHHHHHT---THHHHHHHTHHHHHHHHHHGGGGSTTEEEE-EEETTEEEEEECSCGGGT--C---CB
T ss_pred CCCHHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecCceEEEEEecCcccc--c---cc
Confidence 445555554444 44333 4455555 6667777777653 333322 233334555553211000 0 00
Q ss_pred cCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 209 SFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 209 ~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
.....+...++.++|.++|.++... + .++|++ .....++++++++++.|+++.+++.+
T Consensus 397 ~~~~~~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~-p~~~~t~e~i~~~l~~l~~~l~~~~~ 454 (472)
T 3hmu_A 397 ASEPGTIGYICRERCFANNLIMRHV----G-DRMIIS-PPLVITPAEIDEMFVRIRKSLDEAQA 454 (472)
T ss_dssp SSCTTHHHHHHHHHHHHTTBCCEEE----T-TEEEEC-CCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHCCcEEEec----C-CEEEEE-CCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0000334678899999999755433 2 689984 33456899999999999888776643
No 448
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=93.10 E-value=0.99 Score=49.65 Aligned_cols=51 Identities=10% Similarity=-0.015 Sum_probs=38.3
Q ss_pred HHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 216 NKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 216 n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
..++.++|.++|.++... + .++|++ .+...++++++++++.|+++.+++..
T Consensus 395 ~~~~~~~l~~~Gv~~~~~----~-~~iRi~-~~~~~t~e~i~~~l~~l~~~l~~~~~ 445 (448)
T 3dod_A 395 GYKVSLKMRELGMLTRPL----G-DVIAFL-PPLASTAEELSEMVAIMKQAIHEVTS 445 (448)
T ss_dssp HHHHHHHHHHTTEECCEE----T-TEEEEC-CCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCcEEecc----C-CEEEEE-CCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 357888899999754322 2 689985 34556899999999999999877653
No 449
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=92.66 E-value=0.88 Score=49.52 Aligned_cols=217 Identities=10% Similarity=-0.077 Sum_probs=104.3
Q ss_pred CeEEecCCCC---CcccHHHHHHHHHHHhhCCCCcEE-EEeeCCc-ccccccC----chhhhc-----CCCceecccccc
Q psy13453 37 QVRLSGLPDS---EWLAYLTLRTIYESFRKSFLCPMC-SGYCGRT-LHQDIQS----LNAPVS-----NGPLKVGGVLRR 102 (764)
Q Consensus 37 ~v~~Vpvd~~---~rmD~~aLe~~I~~~~~~G~~p~~-VatAGTT-~~G~iDp----i~~ia~-----~~wlHVDa~l~~ 102 (764)
.+..+|.+.. +..|+++|+++|++... ..+.+ +..-..- +.|.+-| ++++++ ++++++|.+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~le~~l~~~~~--~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~ 236 (430)
T 3i4j_A 159 AWPKLPKPDPARNGAEDAEGLRALLEREGP--ETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSG 236 (430)
T ss_dssp GSCEECCCCTTSCHHHHHTHHHHHHHHHCG--GGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred CceEcCCCcccchhhHHHHHHHHHHHhcCC--CCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhC
Confidence 4567777655 45789999999986310 12334 3444444 6777655 666654 899999975321
Q ss_pred c-c-c---e----------eeeecCCCccccc-ccccc--------c-cCC----cccCCCCcccHHHHHHH---HHHcc
Q psy13453 103 V-Y-S---S----------CLVPRGQKSLRTT-VLFHF--------L-FQH----WQIPLGRRFRALKLWMT---LRSYG 150 (764)
Q Consensus 103 ~-y-~---s----------~ll~rd~~~l~~~-~s~~~--------d-~~d----~tle~SRr~~ALklWat---L~~lG 150 (764)
. + + + ++.+ .+.+..- +...+ + +.. +....+=....+...++ |..+.
T Consensus 237 ~~~~g~~~~~~~~~~~~~di~t~--sK~l~~G~~r~G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~ 314 (430)
T 3i4j_A 237 MGRCGSPLALSRWSGVTPDIAVL--GKGLAAGYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVE 314 (430)
T ss_dssp TTTTSSSSGGGGTTTCCCSEEEE--CGGGTTTSSCCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHH
T ss_pred CCcccchhhhhhhcCCCCcEEEE--cccccCCccccEEEEECHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHH
Confidence 1 0 0 0 0111 0111100 00000 0 000 01111113344544444 44333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhc
Q psy13453 151 LKGLQAYLRKHISLAKKFADLVE----QDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIAR 226 (764)
Q Consensus 151 ~eGy~~~i~~~i~lA~~l~~~I~----~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~ 226 (764)
.+.+ +++..+..+++.+.++ ++|.+..+ ++.-+.+.|.+....... .....+...++.++|.++
T Consensus 315 ~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~ 382 (430)
T 3i4j_A 315 REDL---TGAAKERGAQLLAGLQALQARFPQMMQV-RGTGLLLGVVLGDLATGQ--------AFETPGIASRIGAAALKR 382 (430)
T ss_dssp HTTH---HHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEEC--------------------CHHHHHHHHHHT
T ss_pred cccH---HHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEeccccccC--------CCccHHHHHHHHHHHHhC
Confidence 4444 4444444555555444 45665543 233445555543110000 000011135788899999
Q ss_pred CcEEEEec-ee--CCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 227 KVIYIVKG-SF--QDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 227 G~~~vs~t-~l--~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
|.++.... .. .+..++|+++. ...++++++++++.|+++.+++
T Consensus 383 Gv~v~~~~~~~~~~~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 383 GLITYPGSGAEPNGRGDHLLLGPP-LSITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp TEECC-----------CEEEECCC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEecccccCCCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 97543220 11 13568998533 3467999999999999987664
No 450
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=92.56 E-value=3.8 Score=44.86 Aligned_cols=52 Identities=13% Similarity=0.095 Sum_probs=36.1
Q ss_pred HHHHHHHHHhcCcEEEEece--eCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 216 NKAVYDRIIARKVIYIVKGS--FQDRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 216 n~~L~~~L~~~G~~~vs~t~--l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
..++.+.|.++|.++..... ..+..++|++. ...+++++++.+++.|+++.+
T Consensus 397 ~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~ 450 (452)
T 3n5m_A 397 IASVVNACKEKGLIIGRNGMTTAGYNNILTLAP-PLVISSEEIAFVIGTLKTAME 450 (452)
T ss_dssp HHHHHHHHHHTTEECEECTTSSTTCCCEEEECC-CTTCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCcEEeecCcccCCCCCEEEEEC-CCCCCHHHHHHHHHHHHHHHH
Confidence 35788899999975543321 11256899853 344689999999999987753
No 451
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=91.75 E-value=3.2 Score=46.39 Aligned_cols=206 Identities=16% Similarity=0.071 Sum_probs=119.8
Q ss_pred EEecCC-CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchh---hhc--CCCceecccc------------
Q psy13453 39 RLSGLP-DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNA---PVS--NGPLKVGGVL------------ 100 (764)
Q Consensus 39 ~~Vpvd-~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~---ia~--~~wlHVDa~l------------ 100 (764)
+.-++| +++.+|.++|++...+. +|=+| .+|...+=-.-|+.+ |++ +..+.+|.++
T Consensus 179 ~~Y~vd~~t~~IDyd~~~~~A~~~-----kPklI-i~G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~ps 252 (490)
T 3ou5_A 179 MPYKLNPKTGLIDYNQLALTARLF-----RPRLI-IAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPS 252 (490)
T ss_dssp -CBCEETTTTEECHHHHHHHHHHH-----CCSEE-EECCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCC
T ss_pred cccccCCCCCcccHHHHHHHHhhc-----CCCeE-EECCccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCC
Confidence 445666 67899999999999986 35331 223333333334444 555 7888888854
Q ss_pred -----------ccc-----cceeeeecCCCcc------c---ccccccccc-CCcccCCCCcccHHHH-HHHHHHccHHH
Q psy13453 101 -----------RRV-----YSSCLVPRGQKSL------R---TTVLFHFLF-QHWQIPLGRRFRALKL-WMTLRSYGLKG 153 (764)
Q Consensus 101 -----------~~~-----y~s~ll~rd~~~l------~---~~~s~~~d~-~d~tle~SRr~~ALkl-WatL~~lG~eG 153 (764)
+|+ -++++|+++...- . ..+.-.+|. --+++|++=....++. -.+++.--...
T Consensus 253 P~~~ADvVTtTTHKTLrGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~ 332 (490)
T 3ou5_A 253 PFKHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPM 332 (490)
T ss_dssp GGGTCSEEEEESSSTTCSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHH
T ss_pred ccccceEEeccccccccCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHh
Confidence 121 2356776653100 0 001111121 1357888875555533 33455555667
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEeCC-CCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEE
Q psy13453 154 LQAYLRKHISLAKKFADLVEQDDRFELVCP-PSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIV 232 (764)
Q Consensus 154 y~~~i~~~i~lA~~l~~~I~~~p~~ell~~-P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs 232 (764)
|++..++.+++|+.|++.+.+ .||.++.. .+..+|..-..|.+..+ .+..+.|.+.|. .++
T Consensus 333 fk~Ya~qVv~NAkaLA~~L~~-~G~~vvsGgTdnHlvLvDl~~~g~tG----------------~~ae~~Le~agI-tvN 394 (490)
T 3ou5_A 333 FREYSLQVLKNARAMADALLE-RGYSLVSGGTDNHLVLVDLRPKGLDG----------------ARAERVLELVSI-TAN 394 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TTCEEGGGSCSSSEEEEECGGGTCCH----------------HHHHHHHHHTTE-ECE
T ss_pred HHHHHHHHHHHHHHHHHHHHh-CCCeeecCCCCceEEEEeccccCCCH----------------HHHHHHHHHcCc-EEC
Confidence 899999999999999999998 49999853 44556666444322111 344555666664 344
Q ss_pred eceeCC------eeEEEEec---cCCCCCHHHHHHHHHHHHHHHH
Q psy13453 233 KGSFQD------RLFMRFAI---CSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 233 ~t~l~g------~~~LRi~v---~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
.+.+.+ +..||+-. +.--..+++++++-+.|.++..
T Consensus 395 kN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 395 KNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp EECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 444432 35799843 2223456888888877776653
No 452
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=91.22 E-value=1 Score=50.04 Aligned_cols=108 Identities=8% Similarity=-0.049 Sum_probs=63.1
Q ss_pred cccHHHHHHHHH---HccHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEeCCCCceeEEEEeeccccccccccccCcc
Q psy13453 136 RFRALKLWMTLR---SYGLKGLQAYLRKHISLAKKFADLVEQD---DRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTIS 209 (764)
Q Consensus 136 r~~ALklWatL~---~lG~eGy~~~i~~~i~lA~~l~~~I~~~---p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~ 209 (764)
....+.+.+++. .+-.+ +..++..++.+++.+.|++. +.+.-+ .+.-+++.|....
T Consensus 340 ~~n~~a~aaa~aaL~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-r~~G~~~~i~l~~-------------- 401 (457)
T 3tfu_A 340 MANPLACAVSVASVELLLGQ---DWRTRITELAAGLTAGLDTARALPAVTDV-RVCGAIGVIECDR-------------- 401 (457)
T ss_dssp TTCHHHHHHHHHHHHHHHTS---CHHHHHHHHHHHHHHHHGGGGGSTTEEEE-EECSSCEEEEESS--------------
T ss_pred CcCHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHhcCCCeeee-ecCCeEEEEEECC--------------
Confidence 445555544444 33333 44556666777888888764 444322 1223345554421
Q ss_pred CCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 210 FGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 210 ~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
..+ ..++.++|.++|.+... . ..++|++ ....+++++++++++.|+++.+++
T Consensus 402 -~~~--~~~~~~~l~~~Gv~v~~---~--~~~lRi~-p~~~~t~eei~~~l~~L~~~l~~~ 453 (457)
T 3tfu_A 402 -PVD--LAVATPAALDRGVWLRP---F--RNLVYAM-PPYICTPAEITQITSAMVEVARLV 453 (457)
T ss_dssp -CCC--HHHHHHHHHHTTEECCC---B--TTEEEEC-CCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred -ccc--HHHHHHHHHHCCeEEEe---c--CCEEEEE-CCCCCCHHHHHHHHHHHHHHHHHh
Confidence 111 25688889999964321 1 2578973 233458999999999999887654
No 453
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=91.11 E-value=5.6 Score=43.71 Aligned_cols=116 Identities=18% Similarity=0.156 Sum_probs=63.7
Q ss_pred cccHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEeCCCCceeEEEEeeccccccccccccCc
Q psy13453 136 RFRALKLWMTLRSY---GLKGLQAYLRKHISLAKKFADLVE----QDDRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTI 208 (764)
Q Consensus 136 r~~ALklWatL~~l---G~eGy~~~i~~~i~lA~~l~~~I~----~~p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~ 208 (764)
....+..++++..+ -.++ ++++.-++.+++.+.|+ +++.+..+ .+.-..+.|.+.....
T Consensus 327 ~~~~~~~aaa~aal~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~G~~~~~~~~~~~~---------- 392 (451)
T 3oks_A 327 GGNPIACAAALATIETIESEG---LVARAQQIEKIMKDRLGRLQAEDDRIGDV-RGRGAMIAMELVKAGT---------- 392 (451)
T ss_dssp SSCHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEEBSTTS----------
T ss_pred CCCHHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHHhhCCCeEEE-EEeeEEEEEEEecCcc----------
Confidence 45556555554443 2333 44444555556555554 34544332 2223345554432000
Q ss_pred cCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 209 SFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 209 ~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
.+.......++.++|.++|.++..... +..++|++. +...++++++++++.|+++.+
T Consensus 393 ~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~ 449 (451)
T 3oks_A 393 TEPDADLTKALCAGAHAAGVIVLSCGT--YGNVVRFLP-PLSIGDDLLNEGLDVLEEVLR 449 (451)
T ss_dssp CCBCHHHHHHHHHHHHHTTEECEEECT--TSCEEEECC-CTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCcEEecCCC--CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHh
Confidence 001122346788999999976544322 235799853 344579999999999988753
No 454
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=90.92 E-value=0.41 Score=52.29 Aligned_cols=202 Identities=7% Similarity=-0.055 Sum_probs=101.3
Q ss_pred cHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccC----chhhhc-----CCCceecccccccc-c--------e----
Q psy13453 50 AYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQS----LNAPVS-----NGPLKVGGVLRRVY-S--------S---- 106 (764)
Q Consensus 50 D~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDp----i~~ia~-----~~wlHVDa~l~~~y-~--------s---- 106 (764)
|+++|+++|++... .+.+ +..-...+.|.+-| ++++.+ ++++++|.+..... + +
T Consensus 186 d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~~~~d 262 (429)
T 3k28_A 186 DLESVKYAFEQFGD---DIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGFRVAYNCGQGYYGVTPD 262 (429)
T ss_dssp CHHHHHHHHHHHGG---GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTSSTTHHHHHHTCCCS
T ss_pred CHHHHHHHHHhCCC---CEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccccccCcchHHHHhCCCCc
Confidence 89999999986421 2333 44444445677777 676665 89999998653111 0 0
Q ss_pred eeeecCCCccccccccc--------cccC-C---cccCCCCcccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHhc
Q psy13453 107 CLVPRGQKSLRTTVLFH--------FLFQ-H---WQIPLGRRFRALKLWMTLRSYGLKGLQAYLRKHISLAKKFADLVEQ 174 (764)
Q Consensus 107 ~ll~rd~~~l~~~~s~~--------~d~~-d---~tle~SRr~~ALklWatL~~lG~eGy~~~i~~~i~lA~~l~~~I~~ 174 (764)
++.+ .+.+-.-+... .+.. . ....++-....+.+.+++..+-.-. .+++++..+..+++.+.|++
T Consensus 263 i~t~--sK~~~~G~~iG~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~~ 339 (429)
T 3k28_A 263 LTCL--GKVIGGGLPVGAYGGKAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT-PESYVEFERKAEMLEAGLRK 339 (429)
T ss_dssp EEEE--CGGGGTTSCCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHH
T ss_pred eehh--hhhhcCCCCeEEEEEcHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 1111 11111000000 0111 0 1122233455555555444332101 56667777777788777765
Q ss_pred C----CCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCC
Q psy13453 175 D----DRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQ 250 (764)
Q Consensus 175 ~----p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~ 250 (764)
. +.... .++.-+.+.|.+..+...... ...........++.++|.++|.++... +...+|++ ..
T Consensus 340 ~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~Gv~v~~~----~~~~~r~~---~~ 407 (429)
T 3k28_A 340 AAEKHGIPHH-INRAGSMIGIFFTDEPVINYD----AAKSSNLQFFAAYYREMVEQGVFLPPS----QFEGLFLS---TV 407 (429)
T ss_dssp HHHHTTCCCE-EEEETTEEEEESSSSCCCSHH----HHTTSCHHHHHHHHHHHHHTTEECCSS----TTSCBCCC---TT
T ss_pred HHhhCCCCEE-EEeeccEEEEEEecCCccccc----ccccccHHHHHHHHHHHHHCCeEEecC----CCCCEEEE---CC
Confidence 3 32211 122333455544311100000 000011223467888999999643221 22346663 46
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy13453 251 TEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 251 Tt~e~i~~~l~~l~~~~~~ 269 (764)
+++++++++++.|+++.++
T Consensus 408 ~t~e~i~~~l~~l~~~l~~ 426 (429)
T 3k28_A 408 HSDADIEATIAAAEIAMSK 426 (429)
T ss_dssp CCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 7899999999999987654
No 455
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=89.80 E-value=3.3 Score=44.99 Aligned_cols=212 Identities=8% Similarity=-0.027 Sum_probs=103.2
Q ss_pred CeEEecCCCCCcccHHHHHHHHHHHhhCCCCcEEE-EeeCCcccccccC----chhhhc-----CCCceeccccccc-cc
Q psy13453 37 QVRLSGLPDSEWLAYLTLRTIYESFRKSFLCPMCS-GYCGRTLHQDIQS----LNAPVS-----NGPLKVGGVLRRV-YS 105 (764)
Q Consensus 37 ~v~~Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~V-atAGTT~~G~iDp----i~~ia~-----~~wlHVDa~l~~~-y~ 105 (764)
.++.+|.+ |+++|+++|++.. ..+.+| .+--..++|.+-| ++++.+ ++++.+|...... ++
T Consensus 181 ~~~~~~~~-----d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g 252 (434)
T 2epj_A 181 LTLVTPYN-----DVEALERVFAEYG---DRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLG 252 (434)
T ss_dssp TEEEEETT-----CHHHHHHHHHHHG---GGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSS
T ss_pred ceEecCCC-----CHHHHHHHHHhCC---CCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCC
Confidence 35666642 8999999998631 123343 4433345798766 777665 8899999864311 11
Q ss_pred e---e-e--eecCCCcccccccc----c--------cccCCc---ccC-CCCcccHHHH---HHHHHHccHHHHHHHHHH
Q psy13453 106 S---C-L--VPRGQKSLRTTVLF----H--------FLFQHW---QIP-LGRRFRALKL---WMTLRSYGLKGLQAYLRK 160 (764)
Q Consensus 106 s---~-l--l~rd~~~l~~~~s~----~--------~d~~d~---tle-~SRr~~ALkl---WatL~~lG~eGy~~~i~~ 160 (764)
. + . +..|--++...+.. . .+.... ... ++=....+.+ .++|..+-. .++.++
T Consensus 253 ~~~~~~~~~~~~di~s~sK~l~~G~~~G~v~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~---~~~~~~ 329 (434)
T 2epj_A 253 LEGAQGYFNIEGDIIVLGKIIGGGFPVGAVAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE---EPVYSV 329 (434)
T ss_dssp TTHHHHHHTCCCSEEEEEGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH---SCHHHH
T ss_pred cchhhHHhCCCCCeeeecchhcCCcceeeeeecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHH
Confidence 0 0 0 00000000011100 0 011110 011 1113344433 344444433 345666
Q ss_pred HHHHHHHHHHHHhcCC---CeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeC
Q psy13453 161 HISLAKKFADLVEQDD---RFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQ 237 (764)
Q Consensus 161 ~i~lA~~l~~~I~~~p---~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~ 237 (764)
.-++.+++.+.|++.. ++.....+.-+++.|.+.......... ..........++.++|.++|..+... .
T Consensus 330 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~Gv~v~~~-~-- 402 (434)
T 2epj_A 330 SREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQ----ARKADKKFYVKLHEEMLRRGVFIAPS-N-- 402 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHH----HTTSCHHHHHHHHHHHHHTTEECCSS-T--
T ss_pred HHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchh----ccccCHHHHHHHHHHHHHCCeEEecc-C--
Confidence 6777888888877641 232112233345566553100000000 00001122367888898888643221 1
Q ss_pred CeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHH
Q psy13453 238 DRLFMRFAICSSQTEESDVQLGWNEIRTATEEV 270 (764)
Q Consensus 238 g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i 270 (764)
. ..+|+ +..+++++++.+++.|+++.+++
T Consensus 403 ~-~~~~~---~~~~t~e~i~~~l~~l~~~l~~~ 431 (434)
T 2epj_A 403 L-EAVFT---GLPHQGEALEIAVEGLRSSLKTV 431 (434)
T ss_dssp T-SCEEC---CTTCSHHHHHHHHHHHHHHHHHH
T ss_pred C-CcEEE---eccCCHHHHHHHHHHHHHHHHHH
Confidence 1 12443 35678999999999999987665
No 456
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=89.45 E-value=1.6 Score=47.98 Aligned_cols=90 Identities=11% Similarity=0.146 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEE--eC-----------CCCceeEEE-EeeccccccccccccCccCCccHHHHHHHH
Q psy13453 156 AYLRKHISLAKKFADLVEQDDRFEL--VC-----------PPSMGLVCF-RLKVRFWDKLDNLFGTISFGDNDLNKAVYD 221 (764)
Q Consensus 156 ~~i~~~i~lA~~l~~~I~~~p~~el--l~-----------~P~l~iV~F-ry~P~~~~~~~~~~~~~~~~~d~~n~~L~~ 221 (764)
+..++..+..+++.+.|++.+++++ +. .|+-...+| +.. . + ..++.+
T Consensus 317 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~-~----------------~--~~~~~~ 377 (427)
T 2hox_A 317 FGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCE-W----------------E--EDKDCY 377 (427)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEEC-S----------------G--GGCSHH
T ss_pred HHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECC-C----------------c--HHHHHH
Confidence 3445666778899999999889886 22 122233333 321 0 0 123455
Q ss_pred HHH-hcCcEEEEeceeC-CeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 222 RII-ARKVIYIVKGSFQ-DRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 222 ~L~-~~G~~~vs~t~l~-g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
+|. +.|..+....... +..++|+++.+ ++++++..++.|.++.
T Consensus 378 ~ll~~~gI~v~pg~~f~~~~~~~Ris~~~---~~e~l~~~l~~l~~~~ 422 (427)
T 2hox_A 378 QTFQNGRINTQNGVGFEASSRYVRLSLIK---TQDDFDQLMYYLKDMV 422 (427)
T ss_dssp HHHHHTTEECEEGGGGTSCTTEEEEECSS---CHHHHHHHHHHHHHHH
T ss_pred HHHHHCCEEEcCCCccCCCCCEEEEEecC---CHHHHHHHHHHHHHHH
Confidence 554 6787655443332 35789999985 6788998888887764
No 457
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=88.73 E-value=11 Score=41.30 Aligned_cols=54 Identities=11% Similarity=0.140 Sum_probs=39.1
Q ss_pred HHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13453 215 LNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVL 271 (764)
Q Consensus 215 ~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~ 271 (764)
...++.++|.++|.++..... +..++|+++ +...++++++++++.|+++.+++.
T Consensus 397 ~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~~~ 450 (453)
T 4ffc_A 397 LTKSIAAEALSQGVLILTCGT--FGNVIRLLP-PLVIGDDLLDEGITALSDIIRAKA 450 (453)
T ss_dssp HHHHHHHHHHHTTEECCEECT--TSCEEEECC-CTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCEEecCCC--CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 346788999999975543322 236899853 334579999999999999887764
No 458
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=88.32 E-value=3.7 Score=44.40 Aligned_cols=201 Identities=8% Similarity=-0.085 Sum_probs=96.7
Q ss_pred cHHHHHHHHHHHhhCCCCcEE-EEeeCCcccccccC----chhhhc-----CCCceecccccccc-c--------e----
Q psy13453 50 AYLTLRTIYESFRKSFLCPMC-SGYCGRTLHQDIQS----LNAPVS-----NGPLKVGGVLRRVY-S--------S---- 106 (764)
Q Consensus 50 D~~aLe~~I~~~~~~G~~p~~-VatAGTT~~G~iDp----i~~ia~-----~~wlHVDa~l~~~y-~--------s---- 106 (764)
|+++|+++|++.. ..+.+ +..-...+.|.+-| ++++.+ ++++++|.+....+ + +
T Consensus 185 d~~~le~~l~~~~---~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~~~~d 261 (427)
T 3fq8_A 185 DLEAVKALFAENP---GEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGFRIAYGGVQEKFGVTPD 261 (427)
T ss_dssp CHHHHHHHHHHST---TTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTBTTHHHHHTTCCCS
T ss_pred CHHHHHHHHHhCC---CCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCcchhhHhcCCCCC
Confidence 8999999998632 12344 45555556788877 777665 88999998653111 0 0
Q ss_pred eeeecCCCcccccccccc--------ccCC----cccCCCCcccHHHHHHHH---HHccHHHHHHHHHHHHHHHHHHHHH
Q psy13453 107 CLVPRGQKSLRTTVLFHF--------LFQH----WQIPLGRRFRALKLWMTL---RSYGLKGLQAYLRKHISLAKKFADL 171 (764)
Q Consensus 107 ~ll~rd~~~l~~~~s~~~--------d~~d----~tle~SRr~~ALklWatL---~~lG~eGy~~~i~~~i~lA~~l~~~ 171 (764)
++.+ .+.+..-+...+ +... ....++=....+.+.+++ ..+..++ ++++..++.+++.+.
T Consensus 262 i~t~--sK~~~~G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~---~~~~~~~~~~~~~~~ 336 (427)
T 3fq8_A 262 LTTL--GKIIGGGLPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPG---TYEYLDQITKRLSDG 336 (427)
T ss_dssp EEEE--CGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTT---HHHHHHHHHHHHHHH
T ss_pred hhhh--hhhhhCCcceEEEEEcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHH
Confidence 0000 011111000000 1100 011112233455544444 4333444 445555566666666
Q ss_pred HhcCC---CeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccC
Q psy13453 172 VEQDD---RFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICS 248 (764)
Q Consensus 172 I~~~p---~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~n 248 (764)
+++.. ++....+..-..+.|.+......... ...........++.++|.++|.++.... .. |++ .+
T Consensus 337 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~l~~~Gi~v~~~~----~~--r~~-~~ 405 (427)
T 3fq8_A 337 LLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYE----DAKKSDLQKFSRFHRGMLEQGIYLAPSQ----FE--AGF-TS 405 (427)
T ss_dssp HHHHHHHTTCCCEEEEETTEEEEESSSCCCCSHH----HHTTSCHHHHHHHHHHHHHTTEECCSST----TS--CEE-CC
T ss_pred HHHHHHhCCCCeEEEEeeeEEEEEEecCcccccc----ccccccHHHHHHHHHHHHHCCcEEecCC----CC--CEE-ee
Confidence 65421 11111112233455544321100000 0000112234678889999997433221 11 432 34
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q psy13453 249 SQTEESDVQLGWNEIRTATEE 269 (764)
Q Consensus 249 p~Tt~e~i~~~l~~l~~~~~~ 269 (764)
..+++++++++++.|+++.++
T Consensus 406 ~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 406 LAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp TTCCHHHHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHHh
Confidence 567899999999999887653
No 459
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=88.14 E-value=8.2 Score=42.10 Aligned_cols=113 Identities=8% Similarity=-0.074 Sum_probs=61.7
Q ss_pred HHHHHH-ccHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEeCCCCceeEEEEeec-----c-ccccccccccCccCCc
Q psy13453 143 WMTLRS-YGLKGLQAYLRKHISLAKKFADLVEQDD---RFELVCPPSMGLVCFRLKV-----R-FWDKLDNLFGTISFGD 212 (764)
Q Consensus 143 WatL~~-lG~eGy~~~i~~~i~lA~~l~~~I~~~p---~~ell~~P~l~iV~Fry~P-----~-~~~~~~~~~~~~~~~~ 212 (764)
.++|.. + .+ ++.++.-++.+++.+.+++.. ++....++.-+++.|.+.+ . ....... ....
T Consensus 315 ~aal~~~~-~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~-----~~~~ 385 (453)
T 2cy8_A 315 IAAIDTIL-ED---DVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAE-----VARP 385 (453)
T ss_dssp HHHHHHHH-HT---THHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTC-----SCCC
T ss_pred HHHHHHHh-hh---hHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeccccccccccccccc-----cccc
Confidence 445555 4 33 345566667777777776531 2222223444456665531 0 0000000 0001
Q ss_pred c-HHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHcc
Q psy13453 213 N-DLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLRG 273 (764)
Q Consensus 213 d-~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~~ 273 (764)
+ ....++.++|.++|.+. . .. + . +|+ +...++++++++++.|+++.+++.+.
T Consensus 386 ~~~~~~~l~~~l~~~Gv~v--~-~~-~-~-~~l---~~~~t~~~i~~~l~~l~~~l~~~~~~ 438 (453)
T 2cy8_A 386 DVKMIAAMRMALILEGVDI--G-GR-G-S-VFL---SAQHEREHVEHLVTTFDRVLDRLADE 438 (453)
T ss_dssp CHHHHHHHHHHHHHTTEEC--B-TT-T-E-EEC---CTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHCCeEE--e-CC-C-C-EEe---eccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1 22357888898888754 1 11 2 2 443 46778999999999999998877553
No 460
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=87.74 E-value=8 Score=42.42 Aligned_cols=53 Identities=11% Similarity=0.011 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy13453 214 DLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLR 272 (764)
Q Consensus 214 ~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~ 272 (764)
....++.++|.++|.++... + .++|++ .+..+++++++++++.|+++.+++..
T Consensus 399 ~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~-~~~~~t~e~i~~~l~~l~~~l~~~~~ 451 (459)
T 4a6r_A 399 EIGTLCRDIFFRNNLIMRAC----G-DHIVSA-PPLVMTRAEVDEMLAVAERCLEEFEQ 451 (459)
T ss_dssp HHHHHHHHHHHHTTEECEEE----T-TEEEEC-CCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCeEEecC----C-CEEEEE-CCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34567889999999755443 2 689984 33456899999999999998877653
No 461
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=84.43 E-value=5.8 Score=42.91 Aligned_cols=46 Identities=15% Similarity=0.042 Sum_probs=31.4
Q ss_pred HHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHH
Q psy13453 216 NKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATE 268 (764)
Q Consensus 216 n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~ 268 (764)
..++.++|.++|.++... +...+|+ +..+++++++++++.|+++.+
T Consensus 382 ~~~~~~~l~~~Gi~v~~~----~~~~~~~---~~~~t~e~i~~~l~~l~~~l~ 427 (429)
T 4e77_A 382 FKRFFHLMLEEGVYLAPS----AFEAGFM---SLAHSNEDIQKTVNAARRCFA 427 (429)
T ss_dssp HHHHHHHHHHTTEECCSS----TTSCEEC---CTTCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCeEEeec----CCCCEEE---eccCCHHHHHHHHHHHHHHHH
Confidence 367889999999643222 1122443 356789999999999988753
No 462
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=77.18 E-value=30 Score=37.13 Aligned_cols=101 Identities=12% Similarity=0.104 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcC---CCeEEeCCCCceeEEEEeeccccccccccccCccCCccHHHHHHHHHHHhcCcEEE
Q psy13453 155 QAYLRKHISLAKKFADLVEQD---DRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTISFGDNDLNKAVYDRIIARKVIYI 231 (764)
Q Consensus 155 ~~~i~~~i~lA~~l~~~I~~~---p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L~~~L~~~G~~~v 231 (764)
.++.++..++.+++.+.+++. .++....++.-+++.+.+.........+ ..........++.++|.++|.++.
T Consensus 320 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~Gv~v~ 395 (424)
T 2e7u_A 320 PGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVTFQD----ARRTDTELFKRFFHGLLDRGIYWP 395 (424)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHH----HTTSCHHHHHHHHHHHHTTTEECC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcchhh----hcccCHHHHHHHHHHHHHCCeEEe
Confidence 456667777778888887763 1232111233345555543100000000 000011234678889998886432
Q ss_pred EeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHH
Q psy13453 232 VKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTA 266 (764)
Q Consensus 232 s~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~ 266 (764)
.. . . ..+|+ +...++++++.+++.|+++
T Consensus 396 ~~-~--~-~~~~~---~~~~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 396 PS-N--F-EAAFL---SVAHREEDVEKTLEALRKA 423 (424)
T ss_dssp SS-S--S-SCEEC---CTTCCHHHHHHHHHHHHHH
T ss_pred cc-C--C-CceEe---eccCCHHHHHHHHHHHHHh
Confidence 21 1 1 12443 3567899999999998764
No 463
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=75.46 E-value=23 Score=39.09 Aligned_cols=123 Identities=9% Similarity=-0.014 Sum_probs=69.4
Q ss_pred cccHHHHHHH---HHHccHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEeCCCCceeEEEEeeccccccccccccCcc
Q psy13453 136 RFRALKLWMT---LRSYGLKGLQAYLRKHISLAKKFADLVEQD---DRFELVCPPSMGLVCFRLKVRFWDKLDNLFGTIS 209 (764)
Q Consensus 136 r~~ALklWat---L~~lG~eGy~~~i~~~i~lA~~l~~~I~~~---p~~ell~~P~l~iV~Fry~P~~~~~~~~~~~~~~ 209 (764)
.+..+.+.++ |..+-.+ +++++.-++.+++.+.|++. |.+..+ .+.-.++.|.+....... . ..
T Consensus 330 ~~np~a~aAa~aaL~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-~~~G~~~~i~~~~~~~~~--~----~~ 399 (476)
T 3i5t_A 330 SNQPVACAAALANIELMERE---GIVDQAREMADYFAAALASLRDLPGVAET-RSVGLVGCVQCLLDPTRA--D----GT 399 (476)
T ss_dssp TTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHTTTTSTTEEEE-EEETTEEEEEECCC-----------CC
T ss_pred CcCHHHHHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecCceeEEEEecCcccc--c----cc
Confidence 4455555444 4444333 45566667777888887754 333322 222334445443211000 0 00
Q ss_pred CCccHHHHHHHHHHHhcCcEEEEeceeCCeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHccC
Q psy13453 210 FGDNDLNKAVYDRIIARKVIYIVKGSFQDRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLRGK 274 (764)
Q Consensus 210 ~~~d~~n~~L~~~L~~~G~~~vs~t~l~g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~~~ 274 (764)
....+...++.++|.++|.++... + .++|++ ....+++++++.+++.|+++.+++.+..
T Consensus 400 ~~~~~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~-p~l~~t~e~i~~~l~~l~~~l~~~~~~~ 458 (476)
T 3i5t_A 400 AEDKAFTLKIDERCFELGLIVRPL----G-DLCVIS-PPLIISRAQIDEMVAIMRQAITEVSAAH 458 (476)
T ss_dssp HHHHHHHHHHHHHHHHTTEECEEE----T-TEEEEC-CCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cchhHHHHHHHHHHHHCCCEEEec----C-CEEEEE-CCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 001113567889999999754432 3 689984 3335689999999999999988876544
No 464
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=71.11 E-value=9.5 Score=40.90 Aligned_cols=92 Identities=14% Similarity=0.135 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCc------------e-eEEEEeeccccccccccccCccCCccHHHHHH
Q psy13453 153 GLQAYLRKHISLAKKFADLVEQDDRFELVCPPSM------------G-LVCFRLKVRFWDKLDNLFGTISFGDNDLNKAV 219 (764)
Q Consensus 153 Gy~~~i~~~i~lA~~l~~~I~~~p~~ell~~P~l------------~-iV~Fry~P~~~~~~~~~~~~~~~~~d~~n~~L 219 (764)
.+.++.++..+..+++.+.|++.+++++..+... . .+.++.. +. ..+
T Consensus 279 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~----------------~~----~~~ 338 (391)
T 3bwn_A 279 FFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTK----------------EE----TDL 338 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEES----------------SS----CCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCC----------------cH----HHH
Confidence 4556666677788899999999888876532211 1 1222221 00 245
Q ss_pred HHHHHhcCcEEEEeceeC-CeeEEEEeccCCCCCHHHHHHHHHHHHHHH
Q psy13453 220 YDRIIARKVIYIVKGSFQ-DRLFMRFAICSSQTEESDVQLGWNEIRTAT 267 (764)
Q Consensus 220 ~~~L~~~G~~~vs~t~l~-g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~ 267 (764)
.+.|.+.|.++....... +..++|+++.+ ++++++.+++.|+++.
T Consensus 339 ~~~l~~~gV~v~pg~~fg~~~~~iRis~~~---~~e~i~~~~~~L~~~~ 384 (391)
T 3bwn_A 339 VSELRRHKVMSRAGERCGSDKKHVRVSMLS---REDVFNVFLERLANMK 384 (391)
T ss_dssp HHHHHHTTEECEEGGGGTCCTTEEEEESCS---CHHHHHHHHHHHHSCC
T ss_pred HHHHHHCCEEEccCCCCCCCCCEEEEEecC---CHHHHHHHHHHHHHHH
Confidence 566777887665544332 25689999884 6889999999887664
No 465
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=63.47 E-value=52 Score=37.12 Aligned_cols=56 Identities=13% Similarity=0.137 Sum_probs=41.1
Q ss_pred HHHHHHHhcCcEEEEeceeC-CeeEEEEeccCCCCCHHHHHHHHHHHHHHHHHHHccCC
Q psy13453 218 AVYDRIIARKVIYIVKGSFQ-DRLFMRFAICSSQTEESDVQLGWNEIRTATEEVLRGKS 275 (764)
Q Consensus 218 ~L~~~L~~~G~~~vs~t~l~-g~~~LRi~v~np~Tt~e~i~~~l~~l~~~~~~i~~~~~ 275 (764)
.+.+.+.+.|..+.....+. +..++|+++.+ .++++++.+++.|+++.+++.++.+
T Consensus 471 ~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~~--~~~e~i~~~~~~l~~~l~~~~~~~~ 527 (546)
T 2zy4_A 471 MLFRIADETGIVLLPGRGFGSNRPSGRASLAN--LNEYEYAAIGRALRKMADELYAEYS 527 (546)
T ss_dssp HHHHHHHHHSCCCEESSCTTCSSCEEEEESSS--SCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHCCEEEeCccccCCCCCeEEEEecc--CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777788888665544332 34689999874 4688999999999999888875553
No 466
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=54.25 E-value=41 Score=28.04 Aligned_cols=69 Identities=14% Similarity=0.147 Sum_probs=43.3
Q ss_pred ceEEEecCCcchhH-----HHHHHh---CCCceEEEecCCCCcccHHHHHHHHHHhhh--cCCCceEEEEeeccCCcccc
Q psy13453 631 KLVAYTSDQSNSSV-----EKSAII---GDVPVRQLRSDDNGVLRGDALLTAVKEDLA--KGLIPCCLIATLGTTGTCAF 700 (764)
Q Consensus 631 ~~vi~~S~~aH~Sv-----~kAa~~---lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~--~G~~p~~VvataGTT~~Gai 700 (764)
++++|++..+++|- .+|-++ .|+....+.++.+ . ++++.+.+... ....|.+++ +....|.+
T Consensus 3 ~v~ly~~~~C~~c~~~~~~~~ak~~L~~~~i~~~~~di~~~----~-~~~~~l~~~~g~~~~~vP~ifi---~g~~igG~ 74 (93)
T 1t1v_A 3 GLRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQD----N-ALRDEMRTLAGNPKATPPQIVN---GNHYCGDY 74 (93)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHTTCCCEEEETTSC----H-HHHHHHHHHTTCTTCCSCEEEE---TTEEEEEH
T ss_pred CEEEEEcCCCCCchhhHHHHHHHHHHHHCCCceEEEECCCC----H-HHHHHHHHHhCCCCCCCCEEEE---CCEEEeCH
Confidence 57899999999993 444333 6888888888753 3 34444544332 114565443 45567888
Q ss_pred ccHHHHH
Q psy13453 701 DNLEELG 707 (764)
Q Consensus 701 Dpl~eIa 707 (764)
|++.++.
T Consensus 75 d~l~~l~ 81 (93)
T 1t1v_A 75 ELFVEAV 81 (93)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877654
No 467
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=50.38 E-value=58 Score=28.31 Aligned_cols=74 Identities=12% Similarity=0.089 Sum_probs=48.6
Q ss_pred CceEEEecCCcchhH--HHHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHH
Q psy13453 630 NKLVAYTSDQSNSSV--EKSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELG 707 (764)
Q Consensus 630 ~~~vi~~S~~aH~Sv--~kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa 707 (764)
.+.++|+...+.+|. .+...-.|+....+.+|.. -|..++++.+.+.......|.+.+ +....|.+|++.++.
T Consensus 17 ~~v~vy~~~~Cp~C~~ak~~L~~~~i~~~~~dvd~~--~~~~~~~~~l~~~~g~~tvP~vfi---~g~~igG~d~l~~l~ 91 (114)
T 3h8q_A 17 SRVVIFSKSYCPHSTRVKELFSSLGVECNVLELDQV--DDGARVQEVLSEITNQKTVPNIFV---NKVHVGGCDQTFQAY 91 (114)
T ss_dssp CSEEEEECTTCHHHHHHHHHHHHTTCCCEEEETTTS--TTHHHHHHHHHHHHSCCSSCEEEE---TTEEEESHHHHHHHH
T ss_pred CCEEEEEcCCCCcHHHHHHHHHHcCCCcEEEEecCC--CChHHHHHHHHHHhCCCccCEEEE---CCEEEeCHHHHHHHH
Confidence 367899998888884 3334447888888888742 145566676655443445665544 556778888888765
Q ss_pred H
Q psy13453 708 P 708 (764)
Q Consensus 708 ~ 708 (764)
+
T Consensus 92 ~ 92 (114)
T 3h8q_A 92 Q 92 (114)
T ss_dssp H
T ss_pred H
Confidence 3
No 468
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=48.91 E-value=14 Score=38.79 Aligned_cols=70 Identities=14% Similarity=0.041 Sum_probs=48.8
Q ss_pred hCCCc-eEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc---CCEEEE
Q psy13453 650 IGDVP-VRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY---NIWLHV 719 (764)
Q Consensus 650 ~lGl~-v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~---glwLHV 719 (764)
+-|+- ...-|.+++|++|.+.+++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+. ++++.+
T Consensus 16 ~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 16 LGTLLTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp HCSEEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCceEEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 44552 23346678999999999999999888887666666666666555666666677766553 466655
No 469
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=47.91 E-value=15 Score=38.83 Aligned_cols=62 Identities=11% Similarity=0.056 Sum_probs=47.2
Q ss_pred EecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc--CCEEEE
Q psy13453 658 LRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY--NIWLHV 719 (764)
Q Consensus 658 Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~--glwLHV 719 (764)
-|.+++|++|.+.|++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+. ++++.+
T Consensus 18 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 18 TPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 35578999999999999999988887667776777666666667777777776554 577765
No 470
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=47.68 E-value=12 Score=39.53 Aligned_cols=61 Identities=18% Similarity=0.082 Sum_probs=46.8
Q ss_pred EecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc---CCEEE
Q psy13453 658 LRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY---NIWLH 718 (764)
Q Consensus 658 Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~---glwLH 718 (764)
-|.+++|++|.+.|++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+. ++++.
T Consensus 18 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvi 81 (309)
T 3fkr_A 18 TTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVI 81 (309)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred CCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 46678999999999999999888887777777777777776777777777776553 35554
No 471
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=45.75 E-value=17 Score=38.13 Aligned_cols=62 Identities=18% Similarity=0.128 Sum_probs=43.8
Q ss_pred EecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc---CCEEEE
Q psy13453 658 LRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY---NIWLHV 719 (764)
Q Consensus 658 Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~---glwLHV 719 (764)
-|.+++|++|.+.+++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+. ++++.+
T Consensus 21 TPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 85 (303)
T 2wkj_A 21 TPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIA 85 (303)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred cCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 35578999999999999998888886666665555555555556666666665542 466654
No 472
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=44.58 E-value=14 Score=38.73 Aligned_cols=62 Identities=8% Similarity=-0.126 Sum_probs=47.4
Q ss_pred EecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc---CCEEEE
Q psy13453 658 LRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY---NIWLHV 719 (764)
Q Consensus 658 Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~---glwLHV 719 (764)
-|.+++|++|.+.|++.++...+.|-.-++|++|.|-..+=+.+.-.++.+.+.+. ++++.+
T Consensus 24 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 24 TPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence 35678999999999999999888887667777777766666677777777777664 466654
No 473
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=44.21 E-value=13 Score=38.91 Aligned_cols=62 Identities=10% Similarity=0.107 Sum_probs=45.0
Q ss_pred EecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc---CCEEEE
Q psy13453 658 LRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY---NIWLHV 719 (764)
Q Consensus 658 Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~---glwLHV 719 (764)
-|.+++|++|.+.+++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+. ++++.+
T Consensus 17 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 17 TPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 35578999999999999998888886666666666666665666666677766542 466655
No 474
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=43.86 E-value=66 Score=35.09 Aligned_cols=57 Identities=5% Similarity=-0.098 Sum_probs=37.2
Q ss_pred HHhhcCCCCCCeEEecCC--CCCcccHHHHHHHHHHHhhCCCCcEEEEeeCCcccccccCchh
Q psy13453 27 ATHSLSGTPDQVRLSGLP--DSEWLAYLTLRTIYESFRKSFLCPMCSGYCGRTLHQDIQSLNA 87 (764)
Q Consensus 27 Aa~~LGl~~~~v~~Vpvd--~~~rmD~~aLe~~I~~~~~~G~~p~~VatAGTT~~G~iDpi~~ 87 (764)
..+..|... |...+.. +++.+|.+.+.+.+++... ++-+++-+.+.-+||.+=+-++
T Consensus 153 i~~~aG~~~--V~~~~~~~~~~~~~d~~~~~~~l~~~~~--~~~vll~~~p~NPtG~~~~~~~ 211 (420)
T 4h51_A 153 VVKAAGWKN--ICTYAYYDPKTVSLNFEGMKKDILAAPD--GSVFILHQCAHNPTGVDPSQEQ 211 (420)
T ss_dssp HHHHTTCCC--EEEEECEEGGGTEECHHHHHHHHHHSCS--SCEEEEESSSCTTTCCCCCHHH
T ss_pred HHHHcCCeE--EEeeccccccccCCCHHHHHHHHhccCC--CcEEEEeCCCCCCCCCCCCHHH
Confidence 456677765 2333442 4678999999999986532 2223356778899999855444
No 475
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=43.52 E-value=15 Score=38.37 Aligned_cols=55 Identities=15% Similarity=0.146 Sum_probs=39.9
Q ss_pred ecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc
Q psy13453 659 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY 713 (764)
Q Consensus 659 p~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~ 713 (764)
|.+++|++|.+.+++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+.
T Consensus 14 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~ 68 (294)
T 3b4u_A 14 PFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAA 68 (294)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHT
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 4578899999999999998888886666665555555555556666677766553
No 476
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=43.36 E-value=14 Score=38.48 Aligned_cols=60 Identities=12% Similarity=0.148 Sum_probs=43.6
Q ss_pred ecCCCCcccHHHHHHHHHHhhh-cCCCceEEEEeeccCCccccccHHHHHHHHHhc---CCEEE
Q psy13453 659 RSDDNGVLRGDALLTAVKEDLA-KGLIPCCLIATLGTTGTCAFDNLEELGPICQEY---NIWLH 718 (764)
Q Consensus 659 p~d~~g~md~~~Le~~I~~~~~-~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~---glwLH 718 (764)
|.+++|++|.+.+++.++...+ .|-.-+++++|.|-..+=+.+.-.++.+.+.+. ++++.
T Consensus 14 Pf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi 77 (293)
T 1f6k_A 14 SFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALI 77 (293)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEE
Confidence 4578899999999999998888 886666666666666666666666677666542 46654
No 477
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=43.34 E-value=13 Score=38.77 Aligned_cols=55 Identities=24% Similarity=0.142 Sum_probs=40.6
Q ss_pred ecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc
Q psy13453 659 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY 713 (764)
Q Consensus 659 p~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~ 713 (764)
|.+++|++|.+.+++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+.
T Consensus 10 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~ 64 (288)
T 2nuw_A 10 PFDKQGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDV 64 (288)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTT
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 4578899999999999999888886666666665555555556666677766553
No 478
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=43.22 E-value=61 Score=25.60 Aligned_cols=67 Identities=16% Similarity=0.174 Sum_probs=37.2
Q ss_pred ceEEEecCCcchhHH--HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHH
Q psy13453 631 KLVAYTSDQSNSSVE--KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEE 705 (764)
Q Consensus 631 ~~vi~~S~~aH~Sv~--kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~e 705 (764)
++++|.+..+++|-. ....-.|+.+..+.++.+ . .+.+.+.+....+..|.+++ -| ...|.+++|.+
T Consensus 2 ~i~~y~~~~C~~C~~~~~~l~~~~i~~~~~~i~~~----~-~~~~~~~~~~~~~~vP~l~~--~g-~~i~g~~~i~~ 70 (82)
T 1fov_A 2 NVEIYTKETCPYCHRAKALLSSKGVSFQELPIDGN----A-AKREEMIKRSGRTTVPQIFI--DA-QHIGGYDDLYA 70 (82)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHTCCCEEEECTTC----S-HHHHHHHHHHSSCCSCEEEE--TT-EEEESHHHHHH
T ss_pred cEEEEECCCChhHHHHHHHHHHCCCCcEEEECCCC----H-HHHHHHHHHhCCCCcCEEEE--CC-EEEeCHHHHHH
Confidence 467888888887742 233446888888888753 1 22233333223455676643 34 34454554443
No 479
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=42.84 E-value=12 Score=39.54 Aligned_cols=62 Identities=13% Similarity=0.055 Sum_probs=46.0
Q ss_pred EecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc---CCEEEE
Q psy13453 658 LRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY---NIWLHV 719 (764)
Q Consensus 658 Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~---glwLHV 719 (764)
-|.+++|++|.+.+++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+. ++++.+
T Consensus 34 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 98 (315)
T 3na8_A 34 TPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIV 98 (315)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 35578999999999999999888887667777666666666667777777776553 355554
No 480
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=42.61 E-value=15 Score=38.54 Aligned_cols=61 Identities=21% Similarity=0.049 Sum_probs=43.4
Q ss_pred EecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc---CCEEE
Q psy13453 658 LRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY---NIWLH 718 (764)
Q Consensus 658 Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~---glwLH 718 (764)
-|.+++|++|.+.|++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+. ++++.
T Consensus 26 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi 89 (304)
T 3cpr_A 26 TPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLI 89 (304)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEE
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 35578999999999999998888886666666666655555566666666666542 46654
No 481
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=41.74 E-value=18 Score=38.41 Aligned_cols=62 Identities=10% Similarity=-0.011 Sum_probs=43.3
Q ss_pred EecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc---CCEEEE
Q psy13453 658 LRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY---NIWLHV 719 (764)
Q Consensus 658 Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~---glwLHV 719 (764)
-|.+++|++|.+.|++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+. ++++.+
T Consensus 44 TPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 108 (332)
T 2r8w_A 44 TPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMA 108 (332)
T ss_dssp CCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 35578999999999999998888886666665555555555556666666665543 466654
No 482
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=41.73 E-value=13 Score=38.65 Aligned_cols=61 Identities=13% Similarity=0.079 Sum_probs=43.9
Q ss_pred ecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc---CCEEEE
Q psy13453 659 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY---NIWLHV 719 (764)
Q Consensus 659 p~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~---glwLHV 719 (764)
|.+++|++|.+.+++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+. ++++.+
T Consensus 12 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 12 PMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 5578899999999999998888886666666666655555666666677766543 466654
No 483
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=41.71 E-value=16 Score=38.19 Aligned_cols=55 Identities=11% Similarity=0.014 Sum_probs=40.1
Q ss_pred ecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc
Q psy13453 659 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY 713 (764)
Q Consensus 659 p~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~ 713 (764)
|.+++|++|.+.+++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+.
T Consensus 10 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~ 64 (293)
T 1w3i_A 10 PFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDV 64 (293)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTT
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 5578999999999999999888886556665555555555556666677766653
No 484
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=41.48 E-value=21 Score=38.51 Aligned_cols=62 Identities=15% Similarity=-0.010 Sum_probs=45.1
Q ss_pred EecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc---CCEEEE
Q psy13453 658 LRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY---NIWLHV 719 (764)
Q Consensus 658 Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~---glwLHV 719 (764)
-|.+++|++|.+.|++.++...++|-.-++|++|.|-..+=+.+.-.++.+.+.+. ++++.+
T Consensus 69 TPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 133 (360)
T 4dpp_A 69 TPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG 133 (360)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CcCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 45578999999999999999888887666666666666555666666666665442 467665
No 485
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=41.27 E-value=14 Score=38.58 Aligned_cols=54 Identities=17% Similarity=0.225 Sum_probs=38.8
Q ss_pred ecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh
Q psy13453 659 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE 712 (764)
Q Consensus 659 p~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~ 712 (764)
|.+++|++|.+.+++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+
T Consensus 12 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~ 65 (292)
T 2ojp_A 12 PMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLD 65 (292)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHH
Confidence 457889999999999999888888666666555555555555666666666554
No 486
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=41.21 E-value=13 Score=39.34 Aligned_cols=62 Identities=19% Similarity=0.291 Sum_probs=44.8
Q ss_pred EecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc---CCEEEE
Q psy13453 658 LRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY---NIWLHV 719 (764)
Q Consensus 658 Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~---glwLHV 719 (764)
-|.+++|++|.+.+++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+. ++++.+
T Consensus 32 TPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 96 (315)
T 3si9_A 32 TPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVA 96 (315)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 35578999999999999999888887666666666666666666666677766553 455554
No 487
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=41.14 E-value=15 Score=38.42 Aligned_cols=60 Identities=15% Similarity=-0.001 Sum_probs=40.4
Q ss_pred ecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc---CCEEE
Q psy13453 659 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY---NIWLH 718 (764)
Q Consensus 659 p~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~---glwLH 718 (764)
|.+++|++|.+.+++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+. ++++.
T Consensus 23 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVi 85 (301)
T 1xky_A 23 PFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVI 85 (301)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEE
Confidence 4578899999999999998888886555555555555444555555666665442 35554
No 488
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=41.05 E-value=14 Score=38.99 Aligned_cols=62 Identities=19% Similarity=0.137 Sum_probs=45.5
Q ss_pred EecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc---CCEEEE
Q psy13453 658 LRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY---NIWLHV 719 (764)
Q Consensus 658 Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~---glwLHV 719 (764)
-|.+++|++|.+.+++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+. ++++.+
T Consensus 33 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 97 (314)
T 3qze_A 33 TPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIA 97 (314)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 35578999999999999998888887666776666666666666666777766543 466655
No 489
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=39.78 E-value=24 Score=37.69 Aligned_cols=61 Identities=16% Similarity=0.019 Sum_probs=41.6
Q ss_pred EecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEE
Q psy13453 658 LRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLH 718 (764)
Q Consensus 658 Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLH 718 (764)
-|.+++|++|.+.|++.++...+.|-.-+++++|.|-..+=+.+.-.++.+++-.-++++.
T Consensus 36 TPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpVi 96 (344)
T 2hmc_A 36 TPCRQDRTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVI 96 (344)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEE
Confidence 3557889999999999999888888766666666665555555555556555222345544
No 490
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=39.44 E-value=18 Score=38.72 Aligned_cols=61 Identities=7% Similarity=0.068 Sum_probs=42.6
Q ss_pred EecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc---CCEEE
Q psy13453 658 LRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY---NIWLH 718 (764)
Q Consensus 658 Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~---glwLH 718 (764)
-|.+++|++|.+.+++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+. ++++.
T Consensus 41 TPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVi 104 (343)
T 2v9d_A 41 TIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVL 104 (343)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 45678899999999999998888886666666666655555556666666665542 35554
No 491
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=38.41 E-value=14 Score=38.95 Aligned_cols=62 Identities=21% Similarity=0.107 Sum_probs=46.5
Q ss_pred EecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc---CCEEEE
Q psy13453 658 LRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY---NIWLHV 719 (764)
Q Consensus 658 Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~---glwLHV 719 (764)
-|.+++|++|.+.+++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+. ++++.+
T Consensus 17 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpVia 81 (311)
T 3h5d_A 17 TPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIA 81 (311)
T ss_dssp CCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEE
T ss_pred cCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 35678999999999999999888887777777777766666667777777776653 355554
No 492
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=37.44 E-value=13 Score=38.90 Aligned_cols=55 Identities=15% Similarity=0.120 Sum_probs=42.1
Q ss_pred EecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh
Q psy13453 658 LRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE 712 (764)
Q Consensus 658 Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~ 712 (764)
-|.+++|++|.+.+++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+
T Consensus 14 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~ 68 (300)
T 3eb2_A 14 SPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIE 68 (300)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHH
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHH
Confidence 3557899999999999999888888777777766666666666666677776655
No 493
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=36.86 E-value=18 Score=38.20 Aligned_cols=62 Identities=10% Similarity=0.021 Sum_probs=44.4
Q ss_pred EecCC-CCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc---CCEEEE
Q psy13453 658 LRSDD-NGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY---NIWLHV 719 (764)
Q Consensus 658 Vp~d~-~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~---glwLHV 719 (764)
-|.++ +|++|.+.+++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+. ++++.+
T Consensus 21 TPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpVia 86 (316)
T 3e96_A 21 TPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVA 86 (316)
T ss_dssp CCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 46677 899999999999999888886666666666666665666666677766543 355543
No 494
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=35.93 E-value=20 Score=37.21 Aligned_cols=53 Identities=13% Similarity=0.048 Sum_probs=37.6
Q ss_pred ecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHh
Q psy13453 659 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQE 712 (764)
Q Consensus 659 p~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~ 712 (764)
|.+++| +|.+.+++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+
T Consensus 13 Pf~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~ 65 (291)
T 3a5f_A 13 PFTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVID 65 (291)
T ss_dssp CBCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHH
T ss_pred CcCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH
Confidence 456788 99999999999888888666666666655555555666666666554
No 495
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=35.38 E-value=1.3e+02 Score=25.72 Aligned_cols=70 Identities=10% Similarity=0.023 Sum_probs=41.7
Q ss_pred CceEEEec-----CCcchhHH--HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCcccccc
Q psy13453 630 NKLVAYTS-----DQSNSSVE--KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDN 702 (764)
Q Consensus 630 ~~~vi~~S-----~~aH~Sv~--kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDp 702 (764)
.++++|.. ..+++|.. +...-.|+....+.++.+ . .+++.+.+.......|.++ .+....|.+|+
T Consensus 15 ~~vvvy~~g~~~~~~Cp~C~~ak~~L~~~~i~~~~vdi~~~----~-~~~~~l~~~~g~~~vP~if---i~g~~igG~d~ 86 (109)
T 1wik_A 15 ASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILED----E-EVRQGLKTFSNWPTYPQLY---VRGDLVGGLDI 86 (109)
T ss_dssp SSEEEEESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESSSC----H-HHHHHHHHHHSCCSSCEEE---CSSSEEECHHH
T ss_pred CCEEEEEecCCCCCCCchHHHHHHHHHHcCCCeEEEECCCC----H-HHHHHHHHHhCCCCCCEEE---ECCEEEcCHHH
Confidence 35788888 78887753 334457888888888753 3 3444444433223356433 24456677787
Q ss_pred HHHHH
Q psy13453 703 LEELG 707 (764)
Q Consensus 703 l~eIa 707 (764)
+.++.
T Consensus 87 l~~l~ 91 (109)
T 1wik_A 87 VKELK 91 (109)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66653
No 496
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=35.10 E-value=17 Score=38.41 Aligned_cols=61 Identities=10% Similarity=-0.056 Sum_probs=46.1
Q ss_pred ecC-CCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhc---CCEEEE
Q psy13453 659 RSD-DNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEY---NIWLHV 719 (764)
Q Consensus 659 p~d-~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~---glwLHV 719 (764)
|.+ ++|++|.+.+++.++...+.|-.-+++++|.|-..+=+.+.-.++.+.+.+. ++++.+
T Consensus 21 Pf~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 85 (318)
T 3qfe_A 21 FFDSKTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMA 85 (318)
T ss_dssp CEETTTTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEE
T ss_pred CccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 456 7899999999999999888887777777777766666677777777776553 466654
No 497
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.85 E-value=88 Score=27.14 Aligned_cols=68 Identities=9% Similarity=0.087 Sum_probs=42.0
Q ss_pred ceEEEecCCcchhHH-----HHHHh---CCCceEEEecCCCCcccHHHHHHHHHHhhh------cCC--CceEEEEeecc
Q psy13453 631 KLVAYTSDQSNSSVE-----KSAII---GDVPVRQLRSDDNGVLRGDALLTAVKEDLA------KGL--IPCCLIATLGT 694 (764)
Q Consensus 631 ~~vi~~S~~aH~Sv~-----kAa~~---lGl~v~~Vp~d~~g~md~~~Le~~I~~~~~------~G~--~p~~VvataGT 694 (764)
+++||++..+++|.. +|-.+ .|+....+.++. |.+ +++.+.+... .|. .|.+++ +.
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~~gi~y~~vdI~~----~~~-~~~~l~~~~~~~~~~~~g~~tvP~vfi---~g 80 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVDITM----SEE-QRQWMYKNVPPEKKPTQGNPLPPQIFN---GD 80 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHTTCCEEEEETTT----CHH-HHHHHHHSCCTTTCCSSSSCCSCEEEE---TT
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHHcCCCEEEEECCC----CHH-HHHHHHHHhcccccccCCCCCCCEEEE---CC
Confidence 578999999999984 55444 588888888875 333 4444444320 133 454432 34
Q ss_pred CCccccccHHHH
Q psy13453 695 TGTCAFDNLEEL 706 (764)
Q Consensus 695 T~~GaiDpl~eI 706 (764)
...|.+|++.++
T Consensus 81 ~~iGG~d~l~~l 92 (111)
T 2ct6_A 81 RYCGDYDSFFES 92 (111)
T ss_dssp EEEEEHHHHHHH
T ss_pred EEEeCHHHHHHH
Confidence 567778877664
No 498
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=34.83 E-value=27 Score=36.65 Aligned_cols=49 Identities=6% Similarity=0.006 Sum_probs=37.6
Q ss_pred ecCCCCCcccHHHHHHHHHHHhhCCCCcEEE-EeeCCcccccccCchhhh
Q psy13453 41 SGLPDSEWLAYLTLRTIYESFRKSFLCPMCS-GYCGRTLHQDIQSLNAPV 89 (764)
Q Consensus 41 Vpvd~~~rmD~~aLe~~I~~~~~~G~~p~~V-atAGTT~~G~iDpi~~ia 89 (764)
-|.++++++|.+++++.++...+.|-.-++| ||.|-..+=+.+--.++.
T Consensus 18 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~ 67 (309)
T 3fkr_A 18 TTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLT 67 (309)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHH
T ss_pred CCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHH
Confidence 3556899999999999999999999777776 888877765554444433
No 499
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=34.49 E-value=16 Score=37.94 Aligned_cols=58 Identities=9% Similarity=-0.110 Sum_probs=39.4
Q ss_pred ecCCCCcccHHHHHHHHHHhhhcCCCceEEEEeeccCCccccccHHHHHHHHHhcCCEEE
Q psy13453 659 RSDDNGVLRGDALLTAVKEDLAKGLIPCCLIATLGTTGTCAFDNLEELGPICQEYNIWLH 718 (764)
Q Consensus 659 p~d~~g~md~~~Le~~I~~~~~~G~~p~~VvataGTT~~GaiDpl~eIa~i~~~~glwLH 718 (764)
|.+++|++|.+.+++.++...+. -.-+++++|.|-..+=+.+.-.++.+.+.+ ++++.
T Consensus 9 Pf~~dg~iD~~~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~-rvpvi 66 (283)
T 2pcq_A 9 PFDREGRLDEEAFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP-RKPFL 66 (283)
T ss_dssp CBCTTCCBCHHHHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC-SSCCE
T ss_pred CCCCCCCcCHHHHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh-CCcEE
Confidence 55789999999999999977765 445555555555555555556666666655 55544
No 500
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=34.27 E-value=1.8e+02 Score=24.51 Aligned_cols=71 Identities=15% Similarity=0.134 Sum_probs=44.1
Q ss_pred cCceEEEecCCcchhHH--HHHHhCCCceEEEecCCCCcccHHHHHHHHHHhh-hcCCCceEEEEeeccCCccccccHHH
Q psy13453 629 RNKLVAYTSDQSNSSVE--KSAIIGDVPVRQLRSDDNGVLRGDALLTAVKEDL-AKGLIPCCLIATLGTTGTCAFDNLEE 705 (764)
Q Consensus 629 ~~~~vi~~S~~aH~Sv~--kAa~~lGl~v~~Vp~d~~g~md~~~Le~~I~~~~-~~G~~p~~VvataGTT~~GaiDpl~e 705 (764)
..+++||....+.+|.. +...-.|+....+.++.+ . .+++.+.+.. .....|.+++ +....|.+|++.+
T Consensus 15 ~~~v~vy~~~~Cp~C~~ak~~L~~~~i~y~~idI~~~----~-~~~~~l~~~~~g~~~vP~ifi---~g~~igG~d~l~~ 86 (99)
T 3qmx_A 15 SAKIEIYTWSTCPFCMRALALLKRKGVEFQEYCIDGD----N-EAREAMAARANGKRSLPQIFI---DDQHIGGCDDIYA 86 (99)
T ss_dssp CCCEEEEECTTCHHHHHHHHHHHHHTCCCEEEECTTC----H-HHHHHHHHHTTTCCCSCEEEE---TTEEEESHHHHHH
T ss_pred CCCEEEEEcCCChhHHHHHHHHHHCCCCCEEEEcCCC----H-HHHHHHHHHhCCCCCCCEEEE---CCEEEeChHHHHH
Confidence 45788999999988853 334446888888888753 3 3344444432 3344675433 4456677887776
Q ss_pred HH
Q psy13453 706 LG 707 (764)
Q Consensus 706 Ia 707 (764)
+.
T Consensus 87 ~~ 88 (99)
T 3qmx_A 87 LD 88 (99)
T ss_dssp HH
T ss_pred HH
Confidence 54
Done!