Query psy13459
Match_columns 542
No_of_seqs 494 out of 3276
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 19:56:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13459.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13459hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r9r_B Paddle chimera voltage 100.0 1.7E-70 5.9E-75 593.3 23.0 366 36-417 47-436 (514)
2 2nz0_B Potassium voltage-gated 100.0 3.6E-44 1.2E-48 318.7 10.5 138 5-144 1-138 (140)
3 3rvy_A ION transport protein; 100.0 9.7E-36 3.3E-40 299.8 10.9 231 162-420 14-250 (285)
4 3kvt_A Potassium channel prote 100.0 1.5E-34 5E-39 248.9 9.7 105 39-143 3-108 (115)
5 1s1g_A Potassium voltage-gated 100.0 8.2E-35 2.8E-39 253.6 8.1 112 34-145 6-117 (124)
6 1orq_C Potassium channel; volt 100.0 7E-34 2.4E-38 275.9 14.0 212 185-411 8-220 (223)
7 1nn7_A Potassium channel KV4.2 100.0 1.6E-34 5.5E-39 245.1 7.3 103 42-144 1-103 (105)
8 3beh_A MLL3241 protein; transm 100.0 3.7E-33 1.3E-37 289.6 8.6 216 176-414 3-219 (355)
9 1t1d_A Protein (potassium chan 100.0 1.7E-31 5.8E-36 223.8 5.8 92 41-132 1-94 (100)
10 4dxw_A Navrh, ION transport pr 100.0 4.2E-29 1.4E-33 243.3 11.9 209 185-411 12-225 (229)
11 3drz_A BTB/POZ domain-containi 99.9 5.7E-28 1.9E-32 206.2 3.7 92 37-128 2-97 (107)
12 3drx_A BTB/POZ domain-containi 99.9 1.3E-26 4.5E-31 215.9 6.7 104 34-139 5-112 (202)
13 2a9h_A Voltage-gated potassium 99.9 5.4E-24 1.8E-28 193.3 8.5 129 263-416 16-144 (155)
14 2ih3_C Voltage-gated potassium 99.8 5.4E-21 1.8E-25 167.0 10.8 117 288-414 3-119 (122)
15 1ors_C Potassium channel; volt 99.8 4.8E-20 1.6E-24 163.3 5.8 126 184-325 5-130 (132)
16 3eff_K Voltage-gated potassium 99.7 3.3E-17 1.1E-21 146.5 11.9 95 322-416 6-100 (139)
17 2k1e_A Water soluble analogue 99.7 1.1E-17 3.7E-22 141.6 6.8 91 323-413 7-97 (103)
18 4h33_A LMO2059 protein; bilaye 99.7 4.1E-17 1.4E-21 145.2 5.8 84 324-412 16-99 (137)
19 2kyh_A KVAP, voltage-gated pot 99.7 4.3E-17 1.5E-21 146.4 5.7 132 164-318 7-138 (147)
20 3pjs_K KCSA, voltage-gated pot 99.6 3.7E-17 1.3E-21 150.5 -3.7 88 330-417 41-128 (166)
21 3vou_A ION transport 2 domain 99.6 9.5E-15 3.3E-19 131.9 10.5 76 328-409 30-105 (148)
22 2q67_A Potassium channel prote 99.5 1.6E-14 5.4E-19 124.3 8.9 76 330-412 29-105 (114)
23 3ldc_A Calcium-gated potassium 99.5 4.6E-14 1.6E-18 114.0 9.5 72 331-409 10-81 (82)
24 3ouf_A Potassium channel prote 99.5 6.4E-14 2.2E-18 116.9 10.1 78 328-411 10-87 (97)
25 1xl4_A Inward rectifier potass 99.5 8.2E-14 2.8E-18 139.8 10.3 96 316-411 41-137 (301)
26 1p7b_A Integral membrane chann 99.5 1E-13 3.6E-18 140.5 10.2 97 316-412 55-152 (333)
27 2qks_A KIR3.1-prokaryotic KIR 99.4 3.4E-13 1.2E-17 136.3 11.2 79 332-412 54-134 (321)
28 3um7_A Potassium channel subfa 99.2 4.2E-12 1.4E-16 127.0 5.3 77 331-414 206-288 (309)
29 3ukm_A Potassium channel subfa 99.2 2.4E-11 8.2E-16 119.7 9.0 73 333-411 184-263 (280)
30 3um7_A Potassium channel subfa 99.2 6.4E-11 2.2E-15 118.4 12.2 60 355-414 114-173 (309)
31 3sya_A G protein-activated inw 99.2 1.8E-11 6.2E-16 123.8 8.1 84 330-413 52-150 (340)
32 1lnq_A MTHK channels, potassiu 99.2 5.4E-13 1.9E-17 136.7 -3.9 74 333-413 28-102 (336)
33 3spc_A Inward-rectifier K+ cha 99.1 6.1E-11 2.1E-15 120.1 7.5 85 329-413 53-153 (343)
34 4gx0_A TRKA domain protein; me 99.1 1.1E-10 3.8E-15 127.8 9.6 85 323-412 19-108 (565)
35 3ukm_A Potassium channel subfa 99.1 2.8E-10 9.7E-15 112.1 9.4 58 355-412 92-149 (280)
36 1s6c_B Potassium voltage-gated 98.8 5.1E-10 1.8E-14 69.5 -0.6 29 1-29 1-30 (30)
37 4f4l_A ION transport protein; 98.6 2.5E-08 8.5E-13 85.1 4.1 95 321-415 3-103 (112)
38 3m5b_A Zinc finger and BTB dom 96.1 0.002 7E-08 54.9 1.9 76 42-128 32-108 (119)
39 1r29_A B-cell lymphoma 6 prote 95.8 0.0037 1.3E-07 53.7 2.3 85 41-128 30-116 (127)
40 3ga1_A Nucleus accumbens-assoc 95.5 0.0041 1.4E-07 53.6 1.8 81 42-128 35-117 (129)
41 2vpk_A Myoneurin; transcriptio 95.3 0.01 3.5E-07 49.9 3.3 80 42-127 24-106 (116)
42 3ohu_A Transcription regulator 95.1 0.014 4.7E-07 49.9 3.7 83 42-128 34-118 (125)
43 2ihc_A Transcription regulator 94.9 0.0087 3E-07 51.1 1.7 83 42-128 31-115 (124)
44 2if5_A Zinc finger and BTB dom 94.7 0.0075 2.6E-07 51.1 0.9 86 41-128 26-112 (120)
45 2vkp_A BTB/POZ domain-containi 94.7 0.012 4.1E-07 48.8 2.1 83 42-127 10-97 (109)
46 3b84_A Zinc finger and BTB dom 94.4 0.014 4.8E-07 49.5 1.9 81 42-128 26-107 (119)
47 2yy9_A Zinc finger and BTB dom 94.1 0.032 1.1E-06 48.4 3.6 81 42-128 27-108 (135)
48 2z8h_A Transcription regulator 93.9 0.029 9.8E-07 48.8 2.8 83 42-128 38-122 (138)
49 2ppi_A Gigaxonin; BTB domain, 93.7 0.023 7.9E-07 49.9 2.0 85 42-128 49-136 (144)
50 4eoz_A Speckle-type POZ protei 93.7 0.008 2.8E-07 52.5 -1.1 85 41-127 26-111 (145)
51 3htm_A Speckle-type POZ protei 93.6 0.028 9.6E-07 50.5 2.5 86 41-128 35-121 (172)
52 1buo_A POZ domain, protein (pr 93.2 0.03 1E-06 47.4 1.8 79 42-127 30-109 (121)
53 3fkc_A Transcriptional regulat 93.1 0.051 1.8E-06 45.7 3.0 79 42-126 33-112 (116)
54 2q81_A MIZ-1 protein; BTB/POZ 93.0 0.013 4.6E-07 49.5 -0.7 80 42-128 29-109 (119)
55 3kg2_A Glutamate receptor 2; I 93.0 0.094 3.2E-06 59.1 6.0 55 356-411 563-617 (823)
56 4hpf_A Potassium channel subfa 92.1 0.059 2E-06 60.2 2.7 53 472-524 63-117 (722)
57 3hve_A Gigaxonin; ubiquitin, c 91.9 0.12 4.1E-06 49.7 4.4 86 41-128 32-120 (256)
58 2r9r_B Paddle chimera voltage 91.4 0.85 2.9E-05 48.7 10.8 31 109-139 98-130 (514)
59 3i3n_A Kelch-like protein 11; 91.3 0.12 4.2E-06 50.4 3.8 85 42-128 34-128 (279)
60 3hqi_A Speckle-type POZ protei 88.6 0.16 5.3E-06 50.5 2.0 86 41-128 175-261 (312)
61 2lcm_A Voltage-dependent N-typ 88.5 0.39 1.3E-05 29.6 2.9 25 287-311 4-28 (28)
62 3rvy_A ION transport protein; 88.1 0.46 1.6E-05 46.4 5.0 31 289-319 116-147 (285)
63 3mt5_A Potassium large conduct 82.1 0.51 1.7E-05 52.1 2.2 53 472-524 63-117 (726)
64 4dxw_A Navrh, ION transport pr 80.9 1.9 6.5E-05 40.4 5.5 30 290-319 102-132 (229)
65 2a9h_A Voltage-gated potassium 79.5 4.9 0.00017 35.4 7.4 20 288-307 20-39 (155)
66 3naf_A Calcium-activated potas 74.0 0.87 3E-05 50.8 1.0 53 472-524 113-167 (798)
67 1orq_C Potassium channel; volt 70.7 47 0.0016 30.3 12.3 20 292-311 99-118 (223)
68 3beh_A MLL3241 protein; transm 69.5 13 0.00045 37.0 8.6 19 293-311 95-113 (355)
69 1qg9_A Protein (sodium channel 64.7 2.9 9.9E-05 25.1 1.4 20 233-252 3-22 (26)
70 3pjz_A Potassium uptake protei 53.6 26 0.00089 36.9 7.5 44 356-399 423-473 (494)
71 1ors_C Potassium channel; volt 39.0 9.8 0.00034 32.3 1.2 20 290-309 92-111 (132)
72 2knc_B Integrin beta-3; transm 37.4 1.4E+02 0.0047 22.9 8.5 22 390-411 16-37 (79)
73 2kyh_A KVAP, voltage-gated pot 37.2 9.3 0.00032 33.3 0.8 10 295-304 112-121 (147)
No 1
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=100.00 E-value=1.7e-70 Score=593.33 Aligned_cols=366 Identities=39% Similarity=0.770 Sum_probs=313.3
Q ss_pred CCCCCceEEEEeCCeEEEeeHHHHhcCCCCccccCC-CCCccCCCCceEEEecCCcchHHhhccccc-CcccCCCCCCHH
Q psy13459 36 RKADDEKLLINVSGRRFETWRNTLEKYPDSLLGSNE-REFFYDEDSKEYFFDRDPDIFRHILNYYRT-GKLHYPKHECLT 113 (542)
Q Consensus 36 ~~~~~~~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~-~~~~~~~~~~~~f~DRd~~~F~~Il~~~r~-g~l~~p~~~~~~ 113 (542)
.+..+++|+|||||++|+|+++||+++|+|+||++. +..+|++++|||||||||++|++||||||+ |+|++|+++|.+
T Consensus 47 ~~~~~~~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~DR~~~~F~~IL~~~r~~g~l~~p~~~~~~ 126 (514)
T 2r9r_B 47 DHESSERVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLD 126 (514)
T ss_dssp ----CCEEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEECSCHHHHHHHHHHHHHTSCCCCCTTSCHH
T ss_pred cCCCCCEEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEEcCChHHHHHHHHHHhcCCccccCCcccHH
Confidence 455678999999999999999999999999999974 456899999999999999999999999999 999999999999
Q ss_pred HHHHHHhhcCCCCccccccccchhhhhhhhhHHhhhhcccccCCCCCCchhhHHHHHHHhhhcCCCCchhHHHHHHHHHH
Q psy13459 114 SYDEELAFFGILPDVIGDCCYEDYRDRKRENAERLMDDKLSENGDQNLPQLTNIRQKMWRAFENPHTSTAALVFYYVTGF 193 (542)
Q Consensus 114 ~~~~E~~f~~l~~~~~~~cC~e~~~~~~~e~~~~~~~~~~~e~~~~~~~~~~~~r~~l~~~le~P~ss~~a~~f~~~~~~ 193 (542)
.|.+||+||||.++.++. +.+. |... .++....+++++|+++|.++++|.||..+++|++++++
T Consensus 127 ~~~~E~~f~~i~~~~~~~-----~~~~-----e~~~------~~~~~~~p~~~~r~~lw~l~e~p~sS~~a~~f~~~~i~ 190 (514)
T 2r9r_B 127 IFSEEIRFYELGEEAMEM-----FRED-----EGYI------KEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVM 190 (514)
T ss_dssp HHHHHHHHTTCCHHHHHH-----HHHH-----TTCC------CCCCCCCCSCSSHHHHHHTTTCTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHhh-----hhhh-----hhcc------ccccccCchHHHHHHHHHHhcCCCCcHHHHHHHHHHHH
Confidence 999999999998776543 2211 0110 11112245678999999999999999999999999999
Q ss_pred HHHHhhhheeeecccCCCCCCCC-C--------------CCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhhCccchhhh
Q psy13459 194 FIAVSVMANVVETVPCGHRPGRA-G--------------SLPCGERYKIVFFCLDTACVMIFTAEYLLRLFAAPDRCKFV 258 (542)
Q Consensus 194 lI~ls~i~~~~et~~~~~~~~~~-~--------------~~~~~~~~~~~l~~~e~v~~~iF~~E~~lr~~~a~~~~~y~ 258 (542)
+|++|++++|++|+|+++..... + ..++...+..++.++|++|+++|++|+++|+++++.+++|+
T Consensus 191 ~Illsii~~~leT~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ie~i~~~iFtiE~ilR~~~~~~k~~Y~ 270 (514)
T 2r9r_B 191 VILISIVSFCLETLPIFRDENEDMHGGGVTFHTYSQSTIGYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFF 270 (514)
T ss_dssp HHHHHHHHHHHTTCHHHHTCSTTTTSCCCCHHHHHHHHHSSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHSSCSSSST
T ss_pred HHHHHHHHhhhhccccccccccccccccccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHH
Confidence 99999999999999875322100 0 01123446678999999999999999999999999999999
Q ss_pred ccccchhhhhhhcccceeeccccCC-------chhhhHHHHHHHHHHHHHHhhhhccchhhhhhhhhccchhhHHHHHHH
Q psy13459 259 RSVMSIIDVVAILPYYIGLGITDND-------DVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLVFSL 331 (542)
Q Consensus 259 ~s~~ni~Dli~iip~~i~~~~~~~~-------~~~~~l~~lR~lRllRilkl~r~~~~l~~l~~~l~~s~~~l~~ll~~l 331 (542)
+++||++|+++++|+++.+...... .....++++|++|++|++|+.+++++++.+..++..+.+.++.+++++
T Consensus 271 ks~wniiDli~iip~~i~l~~~~~~~~~~~~~~~~~~lrvlRllRvlRilkL~r~~~~l~~l~~tl~~s~~~l~~ll~~l 350 (514)
T 2r9r_B 271 TNIMNIIDIVAIIPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRIFKLSRHSKGLQILGQTLKASMRELGLLIFFL 350 (514)
T ss_dssp TSHHHHHHHHTTHHHHHHHHHHHTSCSHHHHHTTHHHHHHHHHHGGGGGGGGGGSCHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred hchhHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999877653211 124568889999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHhhhhccCCCCCCCCccchhhhHHHhhhhccccCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13459 332 AMAIIIFATVMFYAEKNVDGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSR 411 (542)
Q Consensus 332 ~~~i~ifa~l~~~~e~~~~~~~f~s~~~a~y~a~vTltTVGYGDi~p~t~~~~i~~~~~~i~g~~~~al~i~~i~~~f~~ 411 (542)
++++++||+++|+.|+..++.+|.+|++|+||+++|||||||||++|.|+.|++++++++++|++++|+++++|+++|+.
T Consensus 351 ~i~~~if~~~~~~~e~~~~~~~F~s~~~a~y~~~vT~TTvGYGDi~P~t~~gr~f~~~~~l~G~~~l~l~iavI~~~f~~ 430 (514)
T 2r9r_B 351 FIGVILFSSAVYFAEADERDSQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNY 430 (514)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCSCSSHHHHHHHHHHHHTTCCCSSSCCCSHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHhhhheeeccCCCccccchhhhhheeeeEEEecccCCCCCCCcchHhhehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988888999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHH
Q psy13459 412 IYHQNQ 417 (542)
Q Consensus 412 ~~~~~~ 417 (542)
.+++++
T Consensus 431 ~~~~~~ 436 (514)
T 2r9r_B 431 FYHRET 436 (514)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 876443
No 2
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=100.00 E-value=3.6e-44 Score=318.68 Aligned_cols=138 Identities=70% Similarity=1.431 Sum_probs=128.0
Q ss_pred ccccchhhhhcCCCCCCCCCCCCCCCCCCCCCCCCCceEEEEeCCeEEEeeHHHHhcCCCCccccCCCCCccCCCCceEE
Q psy13459 5 AAWLPFARAAAIGWVPIATHPLPPPPIPKDRRKADDEKLLINVSGRRFETWRNTLEKYPDSLLGSNEREFFYDEDSKEYF 84 (542)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~~~~~~~~~~~f 84 (542)
|||+||||++++||.|++.++||.+|. ..+...+++|+|||||++|+|+++||.++|+|+|++.++...+++++|+||
T Consensus 1 ~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~~V~LNVGG~~F~T~~~TL~~~P~S~L~~~~~~~~~~~~~g~yF 78 (140)
T 2nz0_B 1 AAWLPFARAAAIGWMPVANCPMPLAPA--DKNKRQDELIVLNVSGRRFQTWRTTLERYPDTLLGSTEKEFFFNEDTKEYF 78 (140)
T ss_dssp CTTHHHHHHTTTTTSSSSCCSSCSSCG--GGCTTCCCEEEEEETTEEEEEEHHHHHTCTTSTTTSGGGGGSEETTTTEEE
T ss_pred CcchhhhHhhcccccccccCCCCCCcc--cccCCCCCEEEEEECCEEEEeeHHHHhcCCCeeecccCCcccccCCCCeEE
Confidence 699999999999999999999987774 556678899999999999999999999999999999766678999999999
Q ss_pred EecCCcchHHhhcccccCcccCCCCCCHHHHHHHHhhcCCCCccccccccchhhhhhhhh
Q psy13459 85 FDRDPDIFRHILNYYRTGKLHYPKHECLTSYDEELAFFGILPDVIGDCCYEDYRDRKREN 144 (542)
Q Consensus 85 ~DRd~~~F~~Il~~~r~g~l~~p~~~~~~~~~~E~~f~~l~~~~~~~cC~e~~~~~~~e~ 144 (542)
|||||.+|++||||||+|+|++|+++|...|.+||+||||+++++++||+++|.++++|.
T Consensus 79 iDRdp~~F~~ILnflR~G~l~~p~~~~~~~l~eEa~fy~i~~l~l~~CC~~~~~~~~~e~ 138 (140)
T 2nz0_B 79 FDRDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGILPEIIGDCCYEEYKDRKREN 138 (140)
T ss_dssp ECSCHHHHHHHHHHHHHSSBCCCTTSCHHHHHHHHHHHTCCGGGBCTTTHHHHHHHTC--
T ss_pred EeCCcHHHHHHHHHHhcCCcCCCCCcCHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999877553
No 3
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A*
Probab=100.00 E-value=9.7e-36 Score=299.75 Aligned_cols=231 Identities=17% Similarity=0.224 Sum_probs=196.1
Q ss_pred chhhHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHhhhheeeecccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHH
Q psy13459 162 PQLTNIRQKMWRAFENPHTSTAALVFYYVTGFFIAVSVMANVVETVPCGHRPGRAGSLPCGERYKIVFFCLDTACVMIFT 241 (542)
Q Consensus 162 ~~~~~~r~~l~~~le~P~ss~~a~~f~~~~~~lI~ls~i~~~~et~~~~~~~~~~~~~~~~~~~~~~l~~~e~v~~~iF~ 241 (542)
++.+++|+++|+++++ ++|+++++++|++|++.+++++.++. ...+..++..+|.+|+++|+
T Consensus 14 p~~~~~r~~~~~i~~~-------~~f~~~i~~li~l~~i~~~~~~~~~~-----------~~~~~~~l~~~e~~~~~iF~ 75 (285)
T 3rvy_A 14 PRGSHMYLRITNIVES-------SFFTKFIIYLIVLNGITMGLETSKTF-----------MQSFGVYTTLFNQIVITIFT 75 (285)
T ss_dssp -----CHHHHHHHHTS-------HHHHHHHHHHHHHHHHHHHHTTCTTH-----------HHHSHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHcC-------HHHHHHHHHHHHHHHHHHHHhcCccc-----------chHHHHHHHHHHHHHHHHHH
Confidence 4445589999999987 68999999999999999999998742 34566789999999999999
Q ss_pred HHHHHHHhhCccchhhhccccchhhhhhhcccceeeccccCCchhhhHHHHHHHHHHHHHHhhhhccchhhhhhhhhccc
Q psy13459 242 AEYLLRLFAAPDRCKFVRSVMSIIDVVAILPYYIGLGITDNDDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCA 321 (542)
Q Consensus 242 ~E~~lr~~~a~~~~~y~~s~~ni~Dli~iip~~i~~~~~~~~~~~~~l~~lR~lRllRilkl~r~~~~l~~l~~~l~~s~ 321 (542)
+|+++|+++++ ++|+++.||++|+++++|+++... ..++++|++|++|++|+.+++++++.+..++..+.
T Consensus 76 ~E~~lrl~~~~--~~y~~~~wn~~Dl~~v~~~~i~~~--------~~~~~lr~~RilR~lrl~~~~~~l~~l~~~l~~~~ 145 (285)
T 3rvy_A 76 IEIILRIYVHR--ISFFKDPWSLFDFFVVAISLVPTS--------SGFEILRVLRVLRLFRLVTAVPQMRKIVSALISVI 145 (285)
T ss_dssp HHHHHHHHTTG--GGGGGCHHHHHHHHHHHHHHSCSS--------SSCTHHHHHGGGGGGHHHHSSTTHHHHHHHHHHHG
T ss_pred HHHHHHHHHHh--HHHHcCChHHhHHHHHHHHHHccc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988 689999999999999999987642 22567899999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCccchhhhHHHhhhhccccC-CCC-cccchh----hHHHHHHHHHHH
Q psy13459 322 SELGFLVFSLAMAIIIFATVMFYAEKNVDGTNFTSIPAAFWYTIVTMTTLGYG-DMV-PETIAG----KIVGGVCSLSGV 395 (542)
Q Consensus 322 ~~l~~ll~~l~~~i~ifa~l~~~~e~~~~~~~f~s~~~a~y~a~vTltTVGYG-Di~-p~t~~~----~i~~~~~~i~g~ 395 (542)
+.+..+++++++++++||++++.++++..+.+|+++++|+||+++|+||+||| |+. |.+..| ++++++++++|+
T Consensus 146 ~~l~~~~~~~~~~~~~fa~~g~~~f~~~~~~~F~s~~~a~~~~~~~~T~~g~~~di~~p~~~~~~~~~~~f~~~~~i~~~ 225 (285)
T 3rvy_A 146 PGMLSVIALMTLFFYIFAIMATQLFGERFPEWFGTLGESFYTLFQVMTLESWSMGIVRPLMEVYPYAWVFFIPFIFVVTF 225 (285)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHSSHHHHHHHHHHHHTTTTCCCCCHHHHHTTCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcccccccCCHHHHHHHHHHHHHhCCCcHHHHHHHHHcCChHHhhHHHHHHHHHH
Confidence 99999999999999999999999888888888999999999999999999999 986 887755 788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13459 396 LVIALPVPVIVSNFSRIYHQNQRAD 420 (542)
Q Consensus 396 ~~~al~i~~i~~~f~~~~~~~~~~~ 420 (542)
+++|+++|++.++|.+..+++++++
T Consensus 226 ~~lnl~~aii~~~f~~~~~~~~~~~ 250 (285)
T 3rvy_A 226 VMINLVVAICVDAMAILNQKEEQHI 250 (285)
T ss_dssp HHHHHHHHHHHHHC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998776655443
No 4
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=100.00 E-value=1.5e-34 Score=248.90 Aligned_cols=105 Identities=40% Similarity=0.843 Sum_probs=97.0
Q ss_pred CCceEEEEeCCeEEEeeHHHHhcCCCCccccCCCC-CccCCCCceEEEecCCcchHHhhcccccCcccCCCCCCHHHHHH
Q psy13459 39 DDEKLLINVSGRRFETWRNTLEKYPDSLLGSNERE-FFYDEDSKEYFFDRDPDIFRHILNYYRTGKLHYPKHECLTSYDE 117 (542)
Q Consensus 39 ~~~~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~-~~~~~~~~~~f~DRd~~~F~~Il~~~r~g~l~~p~~~~~~~~~~ 117 (542)
++++|+|||||++|+|+++||.++|+|+|+++.+. ..+++++|+|||||||.+|++||||||+|+|++|+++|...|.+
T Consensus 3 ~~~~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~FiDRdp~~F~~ILnylR~G~l~~p~~~~~~~~~~ 82 (115)
T 3kvt_A 3 AENRVIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFFDRHPGVFAQIINYYRSGKLHYPTDVCGPLFEE 82 (115)
T ss_dssp -CCEEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEECSCTTTHHHHHHHHHHSCBCCCSSSCHHHHHH
T ss_pred CCCEEEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEEecChHHHHHHHHHhcCCCCCCCCcccHHHHHH
Confidence 56799999999999999999999999999998653 45889999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCccccccccchhhhhhhh
Q psy13459 118 ELAFFGILPDVIGDCCYEDYRDRKRE 143 (542)
Q Consensus 118 E~~f~~l~~~~~~~cC~e~~~~~~~e 143 (542)
||+||||++..+++|||+.|.++|++
T Consensus 83 Ea~fy~i~~~~l~~CC~~~~~~~~~~ 108 (115)
T 3kvt_A 83 ELEFWGLDSNQVEPCCWMTYTAHRDT 108 (115)
T ss_dssp HHHHHTCCGGGBCGGGSHHHHSCC--
T ss_pred HHHHhCCChHHHHHHHHHHHHhccch
Confidence 99999999999999999999987643
No 5
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=100.00 E-value=8.2e-35 Score=253.60 Aligned_cols=112 Identities=70% Similarity=1.423 Sum_probs=100.6
Q ss_pred CCCCCCCceEEEEeCCeEEEeeHHHHhcCCCCccccCCCCCccCCCCceEEEecCCcchHHhhcccccCcccCCCCCCHH
Q psy13459 34 DRRKADDEKLLINVSGRRFETWRNTLEKYPDSLLGSNEREFFYDEDSKEYFFDRDPDIFRHILNYYRTGKLHYPKHECLT 113 (542)
Q Consensus 34 ~~~~~~~~~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~~~~~~~~~~~f~DRd~~~F~~Il~~~r~g~l~~p~~~~~~ 113 (542)
+.+...+++|+|||||++|+|+++||.++|+|+|++.++...+++++|+|||||||.+|++||||||+|+|++|+++|..
T Consensus 6 ~~~~~~~~~V~LNVGG~~F~t~~~TL~~~p~S~L~~~~~~~~~~~~~g~~FiDRdp~~F~~ILnflR~G~l~~p~~~~~~ 85 (124)
T 1s1g_A 6 DKNKRQDELIVLNVSGRRFQTWRTTLERYPDTLLGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHYPRYECIS 85 (124)
T ss_dssp ------CCEEEEEETTEEEEEEHHHHTTSTTSSTTSSGGGGTBCSSSCSEEECSCHHHHHHHHHHHHHSCBCCCTTSCHH
T ss_pred CCCCCCCCEEEEEeCCEEEEEeHHHHhcCCCceecccCCcccccCCCCcEEEcCChHHHHHHHHHHhcCCCCCCCCcCHH
Confidence 34556788999999999999999999999999999966666889999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCccccccccchhhhhhhhhH
Q psy13459 114 SYDEELAFFGILPDVIGDCCYEDYRDRKRENA 145 (542)
Q Consensus 114 ~~~~E~~f~~l~~~~~~~cC~e~~~~~~~e~~ 145 (542)
.|.+||+||||.++.+++||+++|.++++++.
T Consensus 86 ~l~~Ea~fy~i~~l~l~~cC~~~~~~~~~~~~ 117 (124)
T 1s1g_A 86 AYDDELAFYGILPEIIGDCCYEEYKDRKRENL 117 (124)
T ss_dssp HHHHHHHHTTCCGGGBCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHHhHH
Confidence 99999999999999999999999998876554
No 6
>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A
Probab=100.00 E-value=7e-34 Score=275.92 Aligned_cols=212 Identities=23% Similarity=0.368 Sum_probs=174.3
Q ss_pred HHHHHHHHHHHHHhhhheeeecccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhhCccchhhhccccch
Q psy13459 185 LVFYYVTGFFIAVSVMANVVETVPCGHRPGRAGSLPCGERYKIVFFCLDTACVMIFTAEYLLRLFAAPDRCKFVRSVMSI 264 (542)
Q Consensus 185 ~~f~~~~~~lI~ls~i~~~~et~~~~~~~~~~~~~~~~~~~~~~l~~~e~v~~~iF~~E~~lr~~~a~~~~~y~~s~~ni 264 (542)
++|+++++++|++|++..++++.++. ++.+...+..+|.+++++|++|+++|+++++++++|+++ |+
T Consensus 8 ~~f~~~i~~lil~~~~~~~~~~~~~~-----------~~~~~~~l~~~d~~~~~iF~~e~~lr~~~~~~~~~y~~~--~i 74 (223)
T 1orq_C 8 PLVELGVSYAALLSVIVVVVECTMQL-----------SGEYLVRLYLVDLILVIILWADYAYRAYKSGDPAGYVKK--TL 74 (223)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHH-----------TTCTTTHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHH--HH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhccc-----------ChhhhhHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHH--hH
Confidence 57899999999999999999987653 234567889999999999999999999999999999998 89
Q ss_pred hhhhhhcccceeeccccCCchhhhHHHHHHHHHHHHHHhhhhc-cchhhhhhhhhccchhhHHHHHHHHHHHHHHHHHhh
Q psy13459 265 IDVVAILPYYIGLGITDNDDVSGAFVTLRVFRVFRIFKFSRHS-QGLRILGYTLKSCASELGFLVFSLAMAIIIFATVMF 343 (542)
Q Consensus 265 ~Dli~iip~~i~~~~~~~~~~~~~l~~lR~lRllRilkl~r~~-~~l~~l~~~l~~s~~~l~~ll~~l~~~i~ifa~l~~ 343 (542)
+|+++++|+++........+....++.+|++|++|++|+.+.. +..+.+...++. ..+..+++++++.++++|+++|
T Consensus 75 iDllailP~~~~~~~~~~~~~~~~lr~lRllRllR~~r~~~~~~~~~~~l~~~~~~--~~l~~~~~~~~~~~~~~~~~~~ 152 (223)
T 1orq_C 75 YEIPALVPAGLLALIEGHLAGLGLFRLVRLLRFLRILLIISRGSKFLSAIADAADK--IRFYHLFGAVMLTVLYGAFAIY 152 (223)
T ss_dssp HHCTTHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHSCSSHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998755311110112356777777777777776633 333444444433 2466667777778889999999
Q ss_pred hhccCCCCCCCCccchhhhHHHhhhhccccCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13459 344 YAEKNVDGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSR 411 (542)
Q Consensus 344 ~~e~~~~~~~f~s~~~a~y~a~vTltTVGYGDi~p~t~~~~i~~~~~~i~g~~~~al~i~~i~~~f~~ 411 (542)
+.|++.+++++.+|++|+||+++|||||||||++|.|+.||+++++++++|++++++++|.+++.+++
T Consensus 153 ~~e~~~~~~~~~~~~~s~y~~~~t~tTvGyGdi~P~t~~~~~~~~~~~~~G~~~~~~~i~~i~~~~~~ 220 (223)
T 1orq_C 153 IVEYPDPNSSIKSVFDALWWAVVTATTVGYGDVVPATPIGKVIGIAVMLTGISALTLLIGTVSNMFQK 220 (223)
T ss_dssp HTTSSSTTCSCCSHHHHHHHHHHHHTTCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCcCCCcCcchhHHHhHHhHHhccCCCCCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998778889999999999999999999999999999999999999999999999999999999875
No 7
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=100.00 E-value=1.6e-34 Score=245.13 Aligned_cols=103 Identities=71% Similarity=1.506 Sum_probs=97.7
Q ss_pred eEEEEeCCeEEEeeHHHHhcCCCCccccCCCCCccCCCCceEEEecCCcchHHhhcccccCcccCCCCCCHHHHHHHHhh
Q psy13459 42 KLLINVSGRRFETWRNTLEKYPDSLLGSNEREFFYDEDSKEYFFDRDPDIFRHILNYYRTGKLHYPKHECLTSYDEELAF 121 (542)
Q Consensus 42 ~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~~~~~~~~~~~f~DRd~~~F~~Il~~~r~g~l~~p~~~~~~~~~~E~~f 121 (542)
+|+|||||++|+|+++||.++|+|+|++.++...+++++|+|||||||++|++||||||+|+|++|+++|...|.+||+|
T Consensus 1 ~V~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~~FiDRdp~~F~~ILnflR~g~l~~p~~~~~~~l~~Ea~f 80 (105)
T 1nn7_A 1 LIVLNVSGTRFQTWQDTLERYPDTLLGSSERDFFYHPETQQYFFDRDPDIFRHILNFYRTGKLHYPRHECISAYDEELAF 80 (105)
T ss_dssp CEEEEETTEEEEECHHHHHTSCSSSTTSGGGGGGEEGGGTEEEECSCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHHHHH
T ss_pred CEEEEECCEEEEEeHHHHhcCCCccccccCCcccccCCCCcEEEeCCcHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHH
Confidence 58999999999999999999999999997666778999999999999999999999999999999999999999999999
Q ss_pred cCCCCccccccccchhhhhhhhh
Q psy13459 122 FGILPDVIGDCCYEDYRDRKREN 144 (542)
Q Consensus 122 ~~l~~~~~~~cC~e~~~~~~~e~ 144 (542)
|||+++++++||++.|.+++++.
T Consensus 81 y~i~~l~~~~cc~~~~~~~~~~~ 103 (105)
T 1nn7_A 81 FGLIPEIIGDCCYEEYKDRRREN 103 (105)
T ss_dssp HTCCSCCBCHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999887654
No 8
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Probab=99.98 E-value=3.7e-33 Score=289.60 Aligned_cols=216 Identities=21% Similarity=0.322 Sum_probs=186.4
Q ss_pred cCCCCchhHHHHHHHHHHHHHHhhhheeeecccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhhCccch
Q psy13459 176 ENPHTSTAALVFYYVTGFFIAVSVMANVVETVPCGHRPGRAGSLPCGERYKIVFFCLDTACVMIFTAEYLLRLFAAPDRC 255 (542)
Q Consensus 176 e~P~ss~~a~~f~~~~~~lI~ls~i~~~~et~~~~~~~~~~~~~~~~~~~~~~l~~~e~v~~~iF~~E~~lr~~~a~~~~ 255 (542)
.+|+| ++|+++++++|++|+++++++|+|+. .......+..++.++.++|++|+++|+++++.+.
T Consensus 3 ~~p~s----~~f~~~~~~~i~ls~~~~~~~t~~~~-----------~~~~~~~~~~~~~~~~~~f~~e~~~r~~~~~~~~ 67 (355)
T 3beh_A 3 VLPFL----RIYAPLNAVLAAPGLLAVAALTIPDM-----------SGRSRLALAALLAVIWGAYLLQLAATLLKRRAGV 67 (355)
T ss_dssp ----C----CSSSSHHHHHHHHHHHHHHHHTSSSC-----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCS
T ss_pred CCchh----HHHHHHHHHHHHHHHHHHHHHcccch-----------hhhHHHHHHHHHhHHHHHHHHHHHHhcccccccc
Confidence 35666 47789999999999999999999864 2344556777888888889999999999888887
Q ss_pred hhhccccchhhhhhh-cccceeeccccCCchhhhHHHHHHHHHHHHHHhhhhccchhhhhhhhhccchhhHHHHHHHHHH
Q psy13459 256 KFVRSVMSIIDVVAI-LPYYIGLGITDNDDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLVFSLAMA 334 (542)
Q Consensus 256 ~y~~s~~ni~Dli~i-ip~~i~~~~~~~~~~~~~l~~lR~lRllRilkl~r~~~~l~~l~~~l~~s~~~l~~ll~~l~~~ 334 (542)
.|++++||++|++++ +|++..+.. .++.+|++|++|++|+.|++++++.+..++..+...+..++++++++
T Consensus 68 ~~~~~~~~i~Dl~~i~~p~~~~~~~--------~~~~~r~lr~~R~lrl~r~~~~~~~l~~~l~~~~~~l~~~~~~~~~~ 139 (355)
T 3beh_A 68 VRDRTPKIAIDVLAVLVPLAAFLLD--------GSPDWSLYCAVWLLKPLRDSTFFPVLGRVLANEARNLIGVTTLFGVV 139 (355)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHSC--------CSGGGGGGGGGGGSHHHHTCSSHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred eeccCcchHHHHHHHHHHHHHHHhc--------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999 688654321 12457888888889999999999999999988888898888888899
Q ss_pred HHHHHHHhhhhccCCCCCCCCccchhhhHHHhhhhccccCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13459 335 IIIFATVMFYAEKNVDGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSRIYH 414 (542)
Q Consensus 335 i~ifa~l~~~~e~~~~~~~f~s~~~a~y~a~vTltTVGYGDi~p~t~~~~i~~~~~~i~g~~~~al~i~~i~~~f~~~~~ 414 (542)
++++|+++|++|+..++++|.+|++|+||+++|||||||||++|.|+.|++++++++++|+++++++++++++++.+..+
T Consensus 140 ~~~~a~~~~~~e~~~~~~~f~~~~~s~y~~~~t~ttvGygd~~p~t~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~ 219 (355)
T 3beh_A 140 LFAVALAAYVIERDIQPEKFGSIPQAMWWAVVTLSTTGYGDTIPQSFAGRVLAGAVMMSGIGIFGLWAGILATGFYQEVR 219 (355)
T ss_dssp HHHHHHHHHHHHTTTCHHHHSSHHHHHHHHHHHHTTCCCSSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCcccccHHHHHHHHHhheeecCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888889999999999999999999999999999999999999999999999999999999986543
No 9
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=99.97 E-value=1.7e-31 Score=223.76 Aligned_cols=92 Identities=40% Similarity=0.750 Sum_probs=85.2
Q ss_pred ceEEEEeCCeEEEeeHHHHhcCCCCccccCC-CCCccCCCCceEEEecCCcchHHhhccccc-CcccCCCCCCHHHHHHH
Q psy13459 41 EKLLINVSGRRFETWRNTLEKYPDSLLGSNE-REFFYDEDSKEYFFDRDPDIFRHILNYYRT-GKLHYPKHECLTSYDEE 118 (542)
Q Consensus 41 ~~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~-~~~~~~~~~~~~f~DRd~~~F~~Il~~~r~-g~l~~p~~~~~~~~~~E 118 (542)
++|+|||||++|+|+++||.++|+|+|+++. +...+++++|+|||||||++|++||||||+ |+|++|+++|...|.+|
T Consensus 1 ~~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFiDRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~E 80 (100)
T 1t1d_A 1 ERVVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFFDRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSEE 80 (100)
T ss_dssp CEEEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEECSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHHH
T ss_pred CEEEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEEcCChHHHHHHHHHHhcCCcccCCCCCCHHHHHHH
Confidence 4899999999999999999999999999974 346788999999999999999999999999 99999999999999999
Q ss_pred HhhcCCCCcccccc
Q psy13459 119 LAFFGILPDVIGDC 132 (542)
Q Consensus 119 ~~f~~l~~~~~~~c 132 (542)
|+||||.+++++.|
T Consensus 81 a~fy~i~~~~~~~~ 94 (100)
T 1t1d_A 81 IKFYELGENAFERY 94 (100)
T ss_dssp HHHTTCCHHHHHHH
T ss_pred HHHcCCCHHHHHHH
Confidence 99999988877643
No 10
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114}
Probab=99.96 E-value=4.2e-29 Score=243.29 Aligned_cols=209 Identities=15% Similarity=0.220 Sum_probs=173.1
Q ss_pred HHHHHHHHHHHHHhhhheeeecccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhhCccchhhhccccch
Q psy13459 185 LVFYYVTGFFIAVSVMANVVETVPCGHRPGRAGSLPCGERYKIVFFCLDTACVMIFTAEYLLRLFAAPDRCKFVRSVMSI 264 (542)
Q Consensus 185 ~~f~~~~~~lI~ls~i~~~~et~~~~~~~~~~~~~~~~~~~~~~l~~~e~v~~~iF~~E~~lr~~~a~~~~~y~~s~~ni 264 (542)
+.|++++.++|++|++.+++++++. ++.+...+..+|.+|+++|++|+++|+++++++++|++++||+
T Consensus 12 ~~f~~~i~~~I~ln~i~l~~~~~~~------------~~~~~~~l~~~e~~~~~iF~~E~~lri~~~~~~~~y~~~~wni 79 (229)
T 4dxw_A 12 RIFQFTVVSIIILNAVLIGATTYEL------------DPLFLETIHLLDYGITIFFVIEILIRFIGEKQKADFFKSGWNI 79 (229)
T ss_dssp HHHHHHHHHHHHHHHHSTTTCCSSS------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------CHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHccCCC------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHHhcCCcHH
Confidence 7999999999999999999999764 4667788999999999999999999999998888999999999
Q ss_pred hhhhhhcccceeeccccCCchhhhHHHHHHHHHHHHHHhhhhccchhhhhhhhhccchhhHHHHHHHHHHHHHHHHHhhh
Q psy13459 265 IDVVAILPYYIGLGITDNDDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLVFSLAMAIIIFATVMFY 344 (542)
Q Consensus 265 ~Dli~iip~~i~~~~~~~~~~~~~l~~lR~lRllRilkl~r~~~~l~~l~~~l~~s~~~l~~ll~~l~~~i~ifa~l~~~ 344 (542)
+|+++++++++.... ...++++|++|++|++|+.|++++++.+..++.++.+++..+++++++++++||.++++
T Consensus 80 ~D~~~v~~~~i~~~~------~~~~~~lr~~RilR~lrl~~~~~~l~~l~~~l~~s~~~l~~~~~~l~~~~~ifa~~g~~ 153 (229)
T 4dxw_A 80 FDTVIVAISLIPIPN------NSSFLVLRLLRIFRVLRLISVIPELKQIIEAILESVRRVFFVSLLLFIILYIYATMGAI 153 (229)
T ss_dssp HHHHHHHHTTCC--------------CCTTHHHHHHTTHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCc------cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998876531 12345678999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCCccchhhhHHHhhhhccccCCCCc----ccchhh-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13459 345 AEKNVDGTNFTSIPAAFWYTIVTMTTLGYGDMVP----ETIAGK-IVGGVCSLSGVLVIALPVPVIVSNFSR 411 (542)
Q Consensus 345 ~e~~~~~~~f~s~~~a~y~a~vTltTVGYGDi~p----~t~~~~-i~~~~~~i~g~~~~al~i~~i~~~f~~ 411 (542)
.+++.++++|+++++|+||.++++||.||+|+.. .++.+. +|.++.++++++++|+++|++.++|++
T Consensus 154 lf~~~~~~~F~~~~~a~~~lf~~~t~~~w~~i~~~~~~~~~~~~~~f~~~~~i~~~i~lNlfiavi~~~f~~ 225 (229)
T 4dxw_A 154 LFGNDDPSRWGDLGISLITLFQVLTLSSWETVMLPMQEIYWWSWVYFFSFIIICSITILNLVIAILVDVVIQ 225 (229)
T ss_dssp HTTTTSCTTTSSHHHHHHHHHHHHTTSSTHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhccCCcccccCHHHHHHHHHHHHccCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888999999999999999999999999732 233344 456666777789999999999999975
No 11
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=99.94 E-value=5.7e-28 Score=206.22 Aligned_cols=92 Identities=32% Similarity=0.407 Sum_probs=80.2
Q ss_pred CCCCceEEEEeCCeEEEeeHHHHhcCCCCccccCCCC-Ccc---CCCCceEEEecCCcchHHhhcccccCcccCCCCCCH
Q psy13459 37 KADDEKLLINVSGRRFETWRNTLEKYPDSLLGSNERE-FFY---DEDSKEYFFDRDPDIFRHILNYYRTGKLHYPKHECL 112 (542)
Q Consensus 37 ~~~~~~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~-~~~---~~~~~~~f~DRd~~~F~~Il~~~r~g~l~~p~~~~~ 112 (542)
.+.+++|+|||||++|+|+++||.++|+|+|+++... ..+ .+++|+|||||||.+|++||||||+|+|++|+++|.
T Consensus 2 g~~~~~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fiDRdp~~F~~IL~~lr~g~l~~p~~~~~ 81 (107)
T 3drz_A 2 GSVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAE 81 (107)
T ss_dssp ---CCEEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEECSCHHHHHHHHHHHHHSCCCCCTTSCH
T ss_pred CCCCCEEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEecCChHHHHHHHHHhCCCeeCCCCCCCH
Confidence 3467899999999999999999999999999987332 111 347899999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcc
Q psy13459 113 TSYDEELAFFGILPDV 128 (542)
Q Consensus 113 ~~~~~E~~f~~l~~~~ 128 (542)
..|.+||+||||++++
T Consensus 82 ~~l~~Ea~fy~l~~L~ 97 (107)
T 3drz_A 82 EGVLEEAEFYNITSLI 97 (107)
T ss_dssp HHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHCCCHHHH
Confidence 9999999999997764
No 12
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=99.93 E-value=1.3e-26 Score=215.87 Aligned_cols=104 Identities=30% Similarity=0.405 Sum_probs=88.7
Q ss_pred CCCCCCCceEEEEeCCeEEEeeHHHHhcCCCCccccCCC-CCcc---CCCCceEEEecCCcchHHhhcccccCcccCCCC
Q psy13459 34 DRRKADDEKLLINVSGRRFETWRNTLEKYPDSLLGSNER-EFFY---DEDSKEYFFDRDPDIFRHILNYYRTGKLHYPKH 109 (542)
Q Consensus 34 ~~~~~~~~~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~-~~~~---~~~~~~~f~DRd~~~F~~Il~~~r~g~l~~p~~ 109 (542)
..+.+.+++|+|||||++|+|+++||.++|+|+|+++.. ...+ .+++|+|||||||.+|++||||||+|+|++|++
T Consensus 5 ~~~g~~~~~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFIDRDP~~F~~ILnyLRtG~L~lP~~ 84 (202)
T 3drx_A 5 QRPGSVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKD 84 (202)
T ss_dssp SCSSCCCCEEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEECSCSTTHHHHHHHHHHSCCCCCTT
T ss_pred cCCCCCCCEEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEecCChHHHHHHHHHhcCCccCCCCC
Confidence 345667889999999999999999999999999998733 2122 357999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcCCCCccccccccchhhh
Q psy13459 110 ECLTSYDEELAFFGILPDVIGDCCYEDYRD 139 (542)
Q Consensus 110 ~~~~~~~~E~~f~~l~~~~~~~cC~e~~~~ 139 (542)
+|...|.+||+||||.+++ .+|.++..+
T Consensus 85 ~~~~~l~eEA~FygL~~Lv--~~l~~~i~e 112 (202)
T 3drx_A 85 LAEEGVLEEAEFYNITSLI--KLVKDKIRE 112 (202)
T ss_dssp SCHHHHHHHHHHTTCHHHH--HHHHHHHHH
T ss_pred CCHHHHHHHHHHCCcHHHH--HHHHHHHHH
Confidence 9999999999999998754 466666554
No 13
>2a9h_A Voltage-gated potassium channel; potassium channel, KCSA, structure, membrane protein, metal transport; HET: PCA; NMR {Streptomyces lividans} SCOP: f.14.1.1
Probab=99.89 E-value=5.4e-24 Score=193.32 Aligned_cols=129 Identities=22% Similarity=0.411 Sum_probs=82.4
Q ss_pred chhhhhhhcccceeeccccCCchhhhHHHHHHHHHHHHHHhhhhccchhhhhhhhhccchhhHHHHHHHHHHHHHHHHHh
Q psy13459 263 SIIDVVAILPYYIGLGITDNDDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLVFSLAMAIIIFATVM 342 (542)
Q Consensus 263 ni~Dli~iip~~i~~~~~~~~~~~~~l~~lR~lRllRilkl~r~~~~l~~l~~~l~~s~~~l~~ll~~l~~~i~ifa~l~ 342 (542)
+++|+++++|. ++++|++|++|++ +.|+... ++. +.+..+++.+++.++++|.++
T Consensus 16 ~~~dli~~lp~---------------lr~lRllRi~ril-l~r~~~~-------l~~--~~~~~~~~~~~~~i~~~a~~~ 70 (155)
T 2a9h_A 16 GRGRLIKHMPP---------------MLSGLLARLVKLL-LGRHGSA-------LHW--RAAGAATVLLVIVLLAGSYLA 70 (155)
T ss_dssp ----------------------------------------------C-------CHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHH---------------HHHHHHHHHHHHH-HHHHHHH-------HHH--HHHHHHHHHHHHHHHHHHHHH
Confidence 58999999988 3566777777777 6665222 221 223444445566677888899
Q ss_pred hhhccCCCCCCCCccchhhhHHHhhhhccccCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13459 343 FYAEKNVDGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSRIYHQN 416 (542)
Q Consensus 343 ~~~e~~~~~~~f~s~~~a~y~a~vTltTVGYGDi~p~t~~~~i~~~~~~i~g~~~~al~i~~i~~~f~~~~~~~ 416 (542)
|++|+..++++|.+|++|+||+++|+|||||||++|.|+.||+++++++++|+++++++++.+.+.+.+...++
T Consensus 71 ~~~E~~~~~~~~~s~~~a~y~s~vTltTVGYGDi~P~t~~gr~~~~~~~l~Gv~~~a~~~~~i~~~~~~~~~~~ 144 (155)
T 2a9h_A 71 VLAERGAPGAALISYPDALWWSVETATTVGYGDLYPVTLWGRCVAVVVMVAGITSYGLVFAAVATWFVGREQER 144 (155)
T ss_dssp HHHHTTSSCSSTTSHHHHHHHHHHHHTTCCCSSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCC--
T ss_pred HHHhccCCCCccCcccceeheeeeeeecccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888889999999999999999999999999999999999999999999999999999999998755443
No 14
>2ih3_C Voltage-gated potassium channel; ION channel D-amino acid semi-synthetic, membrane protein; HET: 1EM; 1.72A {Streptomyces lividans} PDB: 2ih1_C* 1r3j_C* 1k4d_C* 1r3i_C* 1k4c_C* 1r3k_C* 1r3l_C* 2bob_C* 2boc_C* 2hvj_C* 2hvk_C* 2itc_C 2itd_C 3gb7_C* 3iga_C* 1jvm_A 1s5h_C* 3ifx_A* 1j95_A 2jk5_C* ...
Probab=99.84 E-value=5.4e-21 Score=167.04 Aligned_cols=117 Identities=22% Similarity=0.418 Sum_probs=80.5
Q ss_pred hHHHHHHHHHHHHHHhhhhccchhhhhhhhhccchhhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCccchhhhHHHhh
Q psy13459 288 AFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLVFSLAMAIIIFATVMFYAEKNVDGTNFTSIPAAFWYTIVT 367 (542)
Q Consensus 288 ~l~~lR~lRllRilkl~r~~~~l~~l~~~l~~s~~~l~~ll~~l~~~i~ifa~l~~~~e~~~~~~~f~s~~~a~y~a~vT 367 (542)
.++++|++|++|++ +.|+. .++.. ..+...++.+++.++++|.++|++|++.+++.+.++++|+||+++|
T Consensus 3 ~lr~lRl~Ri~ri~-L~R~~-------~~l~~--~~~~~~~~~~~~~~~~~a~~~~~~E~~~~~~~~~~~~~a~y~~~~T 72 (122)
T 2ih3_C 3 PMLSGLLARLVKLL-LGRHG-------SALHW--RAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWACET 72 (122)
T ss_dssp -----------------------------CHH--HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHHhH-------HHHHH--HHHHHHHHHHHHHHHHHHHhhheeeecCCCCccCccccchhheeee
Confidence 45667777777777 66662 12211 1233344445566677888889999988888899999999999999
Q ss_pred hhccccCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13459 368 MTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSRIYH 414 (542)
Q Consensus 368 ltTVGYGDi~p~t~~~~i~~~~~~i~g~~~~al~i~~i~~~f~~~~~ 414 (542)
+|||||||++|.|+.||+++++++++|+.+++++++.+.+.+.+..+
T Consensus 73 ~tTvGyGDi~P~t~~gr~~~~~~~~~Gi~~~~~~~~~i~~~~~~~~~ 119 (122)
T 2ih3_C 73 ATTVAYGDLYPVTLWGRLVAVVVMVAGITSFGLVTAALATWFVGREQ 119 (122)
T ss_dssp HTTCCCSSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeecCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999986543
No 15
>1ors_C Potassium channel; voltage-dependent, voltage sensor, KVAP, FAB complex, membrane protein; 1.90A {Aeropyrum pernix} SCOP: f.14.1.1
Probab=99.79 E-value=4.8e-20 Score=163.31 Aligned_cols=126 Identities=17% Similarity=0.225 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHhhhheeeecccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhhCccchhhhccccc
Q psy13459 184 ALVFYYVTGFFIAVSVMANVVETVPCGHRPGRAGSLPCGERYKIVFFCLDTACVMIFTAEYLLRLFAAPDRCKFVRSVMS 263 (542)
Q Consensus 184 a~~f~~~~~~lI~ls~i~~~~et~~~~~~~~~~~~~~~~~~~~~~l~~~e~v~~~iF~~E~~lr~~~a~~~~~y~~s~~n 263 (542)
++.|+++++++|++|++++++||+++. ...+...+.++|++|+++|++|+++|+++++++++|++ ||
T Consensus 5 ~~~f~~~i~~lIlls~~~~~~et~~~~-----------~~~~~~~l~~~d~~~~~iFt~E~~lRl~~~~~~~~y~~--~n 71 (132)
T 1ors_C 5 HPLVELGVSYAALLSVIVVVVEYTMQL-----------SGEYLVRLYLVDLILVIILWADYAYRAYKSGDPAGYVK--KT 71 (132)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHSCC-----------CSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTTT--TC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhchhh-----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH--HH
Confidence 378999999999999999999999864 34567789999999999999999999999999999999 99
Q ss_pred hhhhhhhcccceeeccccCCchhhhHHHHHHHHHHHHHHhhhhccchhhhhhhhhccchhhH
Q psy13459 264 IIDVVAILPYYIGLGITDNDDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELG 325 (542)
Q Consensus 264 i~Dli~iip~~i~~~~~~~~~~~~~l~~lR~lRllRilkl~r~~~~l~~l~~~l~~s~~~l~ 325 (542)
++|+++++|+++.+.. + +....++++|++|++|++|+.|++++++.+..++.++.+++.
T Consensus 72 iiDllailp~~~~~~~-~--~~l~~lr~lRllRv~Rvlkl~r~~~~l~~l~~~l~~s~~~l~ 130 (132)
T 1ors_C 72 LYEIPALVPAGLLALI-E--GHLAGLGLFRLVRLLRFLRILLIISRGSKFLSAIADAADKLV 130 (132)
T ss_dssp GGGTGGGSCHHHHHHH-H--HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHh-c--chHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9999999999987765 2 234567789999999999999999999999999998887753
No 16
>3eff_K Voltage-gated potassium channel; FULL length KCSA, bulge helix, cell membrane, ION transport, ionic channel, membrane, transmembrane; 3.80A {Streptomyces lividans}
Probab=99.71 E-value=3.3e-17 Score=146.50 Aligned_cols=95 Identities=24% Similarity=0.470 Sum_probs=85.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCccchhhhHHHhhhhccccCCCCcccchhhHHHHHHHHHHHHHHHHH
Q psy13459 322 SELGFLVFSLAMAIIIFATVMFYAEKNVDGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALP 401 (542)
Q Consensus 322 ~~l~~ll~~l~~~i~ifa~l~~~~e~~~~~~~f~s~~~a~y~a~vTltTVGYGDi~p~t~~~~i~~~~~~i~g~~~~al~ 401 (542)
+.+...++++++.++++|++++++|+..+++.+.+|.+|+||+++|+|||||||++|.|..||+++++++++|+++++++
T Consensus 6 r~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~a~yf~~~T~tTvGyGd~~P~t~~~r~~~~~~~~~G~~~~~~~ 85 (139)
T 3eff_K 6 RAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLYPVTLWGRLVAVVVMVAGITSFGLV 85 (139)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHTTSSCTTCCCCCHHHHHHHHHHHHTTCCCSSSCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCHHHHHHHHheeeecccCCCCcCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 45566666777888889999999999888888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy13459 402 VPVIVSNFSRIYHQN 416 (542)
Q Consensus 402 i~~i~~~f~~~~~~~ 416 (542)
++.+++.+.+..++.
T Consensus 86 ~~~i~~~~~~~~~~~ 100 (139)
T 3eff_K 86 TAALATWFVGREQER 100 (139)
T ss_dssp HHHHTTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999887765544
No 17
>2k1e_A Water soluble analogue of potassium channel, KCSA; homotetramer, ION transport, ionic channel, membrane, transmembrane, transport; NMR {Escherichia coli} PDB: 2kb1_A
Probab=99.70 E-value=1.1e-17 Score=141.61 Aligned_cols=91 Identities=29% Similarity=0.393 Sum_probs=81.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCccchhhhHHHhhhhccccCCCCcccchhhHHHHHHHHHHHHHHHHHH
Q psy13459 323 ELGFLVFSLAMAIIIFATVMFYAEKNVDGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPV 402 (542)
Q Consensus 323 ~l~~ll~~l~~~i~ifa~l~~~~e~~~~~~~f~s~~~a~y~a~vTltTVGYGDi~p~t~~~~i~~~~~~i~g~~~~al~i 402 (542)
.+...++++++.+++++.+++++|+..+++.+.+|.+|+||+++|+|||||||++|.++.||+++++++++|+.++++++
T Consensus 7 ~~l~~~~~~~~~~~~~a~~~~~~E~~~~~~~~~~~~~a~y~~~~T~tTvGyGDi~P~t~~gr~~~~~~~l~G~~~~~~~~ 86 (103)
T 2k1e_A 7 EAQKAEEELQKVLEEASKKAVEAERGAPGAALISYPDAIWWSVETATTVGYGDRYPVTEEGRKVAEQVMKAGIEVFALVT 86 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCGGGTTTTTTGGGGCCSCCSSCCCSSSCTHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCCCCcccccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Confidence 34445556667778888999999998888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q psy13459 403 PVIVSNFSRIY 413 (542)
Q Consensus 403 ~~i~~~f~~~~ 413 (542)
+.+.+.+.+..
T Consensus 87 ~~i~~~~~~~~ 97 (103)
T 2k1e_A 87 AALATDFVRRE 97 (103)
T ss_dssp HHHHTTGGGHH
T ss_pred HHHHHHHHHHH
Confidence 99999887644
No 18
>4h33_A LMO2059 protein; bilayers, KVLM, lipidic cubic phase (LCP), pore module, ION membrane protein; HET: OLC; 3.10A {Listeria monocytogenes} PDB: 4h37_A
Probab=99.66 E-value=4.1e-17 Score=145.23 Aligned_cols=84 Identities=32% Similarity=0.605 Sum_probs=70.5
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCccchhhhHHHhhhhccccCCCCcccchhhHHHHHHHHHHHHHHHHHHH
Q psy13459 324 LGFLVFSLAMAIIIFATVMFYAEKNVDGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVP 403 (542)
Q Consensus 324 l~~ll~~l~~~i~ifa~l~~~~e~~~~~~~f~s~~~a~y~a~vTltTVGYGDi~p~t~~~~i~~~~~~i~g~~~~al~i~ 403 (542)
+..++++++++++++++.+++.|. ++++|++|+||+++|+|||||||++|.|+.||+++++++++|+++++++++
T Consensus 16 l~~~l~~~~~~~~~~~~~~~~~e~-----~~~~~~~a~y~~~~T~tTvGyGDi~P~t~~gr~~~~~~~~~g~~~~~~~~~ 90 (137)
T 4h33_A 16 LNRFLMIFVLLVIIIPVPMVFIEP-----EINNYPDALWWAIVTATTVGYGDIVPVTPIGRILASIMMLFGIAFIGMITS 90 (137)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHCS-----SCCSHHHHHHHHHHHHTTCCCSSSCCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc-----CCCCHHHHHHHHHHHHHcccCCCCCCCCHhHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555556667777777764 367999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q psy13459 404 VIVSNFSRI 412 (542)
Q Consensus 404 ~i~~~f~~~ 412 (542)
.+.+.+.+.
T Consensus 91 ~i~~~~~~~ 99 (137)
T 4h33_A 91 TITNFFRCK 99 (137)
T ss_dssp HHHTTTTTT
T ss_pred HHHHHHHHH
Confidence 999988653
No 19
>2kyh_A KVAP, voltage-gated potassium channel; ION channel, membrane protein; NMR {Aeropyrum pernix}
Probab=99.66 E-value=4.3e-17 Score=146.40 Aligned_cols=132 Identities=17% Similarity=0.214 Sum_probs=103.9
Q ss_pred hhHHHHHHHhhhcCCCCchhHHHHHHHHHHHHHHhhhheeeecccCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Q psy13459 164 LTNIRQKMWRAFENPHTSTAALVFYYVTGFFIAVSVMANVVETVPCGHRPGRAGSLPCGERYKIVFFCLDTACVMIFTAE 243 (542)
Q Consensus 164 ~~~~r~~l~~~le~P~ss~~a~~f~~~~~~lI~ls~i~~~~et~~~~~~~~~~~~~~~~~~~~~~l~~~e~v~~~iF~~E 243 (542)
..++|+++|+++++ +.|++++++++++|++..++++.+.. ...+...+..+|++|.++|++|
T Consensus 7 ~~~~~~~~~~~~e~-------~~f~~~i~~lil~sv~~v~~et~~~i-----------~~~~~~~~~~id~~~~~iF~~E 68 (147)
T 2kyh_A 7 LGGRVRNIGDVMEH-------PLVELGVSYAALLSVIVVVVEYTMQL-----------SGEYLVRLYLVDLILVIILWAD 68 (147)
T ss_dssp CSHHHHHHHHHHTC-------HHHHHHHHHHHHHHHHHHHHHHHCCC-----------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-------chHHHHHHHHHHHHHHHHHHHHhHhh-----------chhHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999 47899999999999999999998853 3445677899999999999999
Q ss_pred HHHHHhhCccchhhhccccchhhhhhhcccceeeccccCCchhhhHHHHHHHHHHHHHHhhhhccchhhhhhhhh
Q psy13459 244 YLLRLFAAPDRCKFVRSVMSIIDVVAILPYYIGLGITDNDDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLK 318 (542)
Q Consensus 244 ~~lr~~~a~~~~~y~~s~~ni~Dli~iip~~i~~~~~~~~~~~~~l~~lR~lRllRilkl~r~~~~l~~l~~~l~ 318 (542)
+++|++.++++++|+++ |++|+++++|+++.+... .....++++|++|++|++|+.|+....+.+..++.
T Consensus 69 y~lRl~~a~~k~~f~~~--~iiDllailP~~~~~~~~---~~lr~lRvlRllRv~Rllrl~r~~~~~~~l~~al~ 138 (147)
T 2kyh_A 69 YAYRAYKSGDPAGYVKK--TLYEIPALVPAGLLALIE---GHLAGLGLFRLVRLLRFLRILLIISRGSKFLSAIA 138 (147)
T ss_dssp HHHHHHHHTCHHHHHHH--STTTHHHHCCHHHHHHHH---HHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCcHHHHHHH--HHHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 999999999998765431 12344555566666666666666555444444443
No 20
>3pjs_K KCSA, voltage-gated potassium channel; ION channel, conducts K+ IONS, cell membrane, transport PROT; 3.80A {Streptomyces lividans} PDB: 1f6g_A
Probab=99.58 E-value=3.7e-17 Score=150.52 Aligned_cols=88 Identities=27% Similarity=0.518 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCCCCccchhhhHHHhhhhccccCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13459 330 SLAMAIIIFATVMFYAEKNVDGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNF 409 (542)
Q Consensus 330 ~l~~~i~ifa~l~~~~e~~~~~~~f~s~~~a~y~a~vTltTVGYGDi~p~t~~~~i~~~~~~i~g~~~~al~i~~i~~~f 409 (542)
+++++++++|+++|++|+..+++.+.+|.+|+||+++|+|||||||++|.|..|++++++++++|+++++++++.+++.+
T Consensus 41 ~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~a~yf~~~T~tTvGyGDi~P~t~~~r~~~~~~~l~G~~~~~~~~~~i~~~~ 120 (166)
T 3pjs_K 41 LLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLYPVTLWGRLVAVVVMVAGITSFGLVTAALATWF 120 (166)
T ss_dssp SSTTTTTTTSSSSSSTTSSSTTCCCCSTTTTTTTTHHHHSCCCCSSSCCCSSTTTTTTHHHHHHHHHHHHHHHTTSSSSS
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcccCCHHHHHHHHHHHhccccCCCCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666777888888887788889999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHH
Q psy13459 410 SRIYHQNQ 417 (542)
Q Consensus 410 ~~~~~~~~ 417 (542)
.+...+.+
T Consensus 121 ~~~~~~~~ 128 (166)
T 3pjs_K 121 VGQEQQQQ 128 (166)
T ss_dssp SSSHHHHH
T ss_pred HHHHHHHH
Confidence 76544433
No 21
>3vou_A ION transport 2 domain protein, voltage-gated SOD channel; 4-helical bundle, ION channel, membrane, transport protein; 3.20A {Bacillus weihenstephanensis}
Probab=99.56 E-value=9.5e-15 Score=131.86 Aligned_cols=76 Identities=21% Similarity=0.359 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCCCCCCccchhhhHHHhhhhccccCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy13459 328 VFSLAMAIIIFATVMFYAEKNVDGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVS 407 (542)
Q Consensus 328 l~~l~~~i~ifa~l~~~~e~~~~~~~f~s~~~a~y~a~vTltTVGYGDi~p~t~~~~i~~~~~~i~g~~~~al~i~~i~~ 407 (542)
+++++++++++++++|....+ .+|.+|+||+++|+|||||||++|.|..||+++++++++|++++++.++.+.+
T Consensus 30 ~~~~~~~~~~~g~~~~~~~e~------~~~~~a~y~~~~t~tTvGyGd~~p~t~~~r~~~~~~~~~g~~~~~~~~~~~~~ 103 (148)
T 3vou_A 30 LFVLTFLTLTSGTIFYSTVEG------LRPLDALYFSVVTLTTVGDGNFSPQTDFGKVFTILYIFIGIGLVFGFIHKLAV 103 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHTSC------CCHHHHHHHHHHHHTTCCCSSCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555666665553322 48999999999999999999999999999999999999999999999999887
Q ss_pred HH
Q psy13459 408 NF 409 (542)
Q Consensus 408 ~f 409 (542)
.+
T Consensus 104 ~~ 105 (148)
T 3vou_A 104 NV 105 (148)
T ss_dssp CC
T ss_pred HH
Confidence 43
No 22
>2q67_A Potassium channel protein; inverted teepee, helix bundle, tetramer, central cavity, ION metal transport, membrane protein; 2.30A {Bacillus cereus} PDB: 2q68_A 2q6a_A 2q69_A 2ahy_A 2ahz_A
Probab=99.53 E-value=1.6e-14 Score=124.29 Aligned_cols=76 Identities=24% Similarity=0.340 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHhhh-hccCCCCCCCCccchhhhHHHhhhhccccCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13459 330 SLAMAIIIFATVMFY-AEKNVDGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSN 408 (542)
Q Consensus 330 ~l~~~i~ifa~l~~~-~e~~~~~~~f~s~~~a~y~a~vTltTVGYGDi~p~t~~~~i~~~~~~i~g~~~~al~i~~i~~~ 408 (542)
++++.++++++++|. .|+ .++.+|+||+++|+|||||||++|.|+.||+++++++++|+.++++.++.+.+.
T Consensus 29 ~~~~~~~~~g~~~~~~~e~-------~~~~~a~y~~~~T~tTvGyGdi~P~t~~gr~~~~~~~~~G~~~~~~~~~~l~~~ 101 (114)
T 2q67_A 29 VLTILTLISGTIFYSTVEG-------LRPIDALYFSVVTLTTVGAGNFSPQTDFGKIFTILYIFIGIGLVFGFIHKLAVN 101 (114)
T ss_dssp HHHHHHHHHHHHHHHHHSC-------CCHHHHHHHHHHHHTSCCCSSCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcC-------CCHHHHHHHHHHHhcceeCCCCccCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555655554 443 489999999999999999999999999999999999999999999999999988
Q ss_pred HHHH
Q psy13459 409 FSRI 412 (542)
Q Consensus 409 f~~~ 412 (542)
+...
T Consensus 102 ~~~~ 105 (114)
T 2q67_A 102 VQLP 105 (114)
T ss_dssp HCC-
T ss_pred HHHH
Confidence 8543
No 23
>3ldc_A Calcium-gated potassium channel MTHK; transmembrane, ION channel, open conformation, IO transport; 1.45A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3lde_A 4hyo_A 4hz3_D 3r65_A 3ous_A 3ldd_A
Probab=99.51 E-value=4.6e-14 Score=114.01 Aligned_cols=72 Identities=25% Similarity=0.378 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHhhhhccCCCCCCCCccchhhhHHHhhhhccccCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13459 331 LAMAIIIFATVMFYAEKNVDGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNF 409 (542)
Q Consensus 331 l~~~i~ifa~l~~~~e~~~~~~~f~s~~~a~y~a~vTltTVGYGDi~p~t~~~~i~~~~~~i~g~~~~al~i~~i~~~f 409 (542)
++..+.+.+.+++..|+ +++.+|+||+++|+|||||||++|.|+.||++++++++.|+.++++.++.+.+.+
T Consensus 10 ~~~~~~~g~~~~~~~e~-------~~~~~a~yf~~~T~tTvGyGdi~P~t~~~r~~~~~~~~~G~~~~~~~~~~i~~~l 81 (82)
T 3ldc_A 10 VLAVIIYGTAGFHFIEG-------ESWTVSLYWTFVTIATVGYGDYSPHTPLGMYFTCTLIVLGIGTFAVAVERLLEFL 81 (82)
T ss_dssp HHHHHHHHHHHHHHHHC-------CCHHHHHHHHHHHHTTCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc-------CCHHHHHHHHHHHhcccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344445555556776 3899999999999999999999999999999999999999999999999988765
No 24
>3ouf_A Potassium channel protein; ION channel, membrane, membrane protein; 1.55A {Bacillus cereus} PDB: 3t4z_A 3tcu_A 3t1c_A 3tet_A 3t4d_A 3t2m_A 3e86_A 3e83_A 3e89_A 3e8b_A 3e8f_A 3e8g_A 3e8h_A 3k0d_A 3k0g_A 3k06_A 3k08_A 3k04_A 3k03_A
Probab=99.50 E-value=6.4e-14 Score=116.86 Aligned_cols=78 Identities=26% Similarity=0.423 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCCCCCCccchhhhHHHhhhhccccCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy13459 328 VFSLAMAIIIFATVMFYAEKNVDGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVS 407 (542)
Q Consensus 328 l~~l~~~i~ifa~l~~~~e~~~~~~~f~s~~~a~y~a~vTltTVGYGDi~p~t~~~~i~~~~~~i~g~~~~al~i~~i~~ 407 (542)
+++++++++++++++|..+.+ .++.+|+||+++|+|||||||++|.|..||+++++++++|+.++++.++.+..
T Consensus 10 ~~~~~~~~~~~g~~~~~~~e~------~~~~~a~yf~~~T~tTvGyGdi~P~t~~gr~~~~~~~~~G~~~~~~~i~~i~~ 83 (97)
T 3ouf_A 10 LFVLTILTLISGTIFYSTVEG------LRPIDALYFSVVTLTTVGYGDFSPQTDFGKIFTILYIFIGIGLVFGFIHKLAV 83 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHSC------CCHHHHHHHHHHHHTTCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555555555543322 58999999999999999999999999999999999999999999999999998
Q ss_pred HHHH
Q psy13459 408 NFSR 411 (542)
Q Consensus 408 ~f~~ 411 (542)
.++.
T Consensus 84 ~~~~ 87 (97)
T 3ouf_A 84 NVQL 87 (97)
T ss_dssp HTHH
T ss_pred HHhH
Confidence 8764
No 25
>1xl4_A Inward rectifier potassium channel; integral membrane protein, ION channel, inwardly rectifying channel, metal transport; 2.60A {Magnetospirillum magnetotacticum} SCOP: b.1.18.16 f.14.1.1 PDB: 1xl6_A* 2wlh_A 2wli_B 2wlj_A* 2wlk_A* 2wlm_A 2wlo_A 2wln_A 3zrs_A 2wli_A 2x6c_A* 2x6b_A* 2x6a_A*
Probab=99.48 E-value=8.2e-14 Score=139.80 Aligned_cols=96 Identities=23% Similarity=0.387 Sum_probs=77.3
Q ss_pred hhhccchhhHHHHHHHH-HHHHHHHHHhhhhccCCCCCCCCccchhhhHHHhhhhccccCCCCcccchhhHHHHHHHHHH
Q psy13459 316 TLKSCASELGFLVFSLA-MAIIIFATVMFYAEKNVDGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSG 394 (542)
Q Consensus 316 ~l~~s~~~l~~ll~~l~-~~i~ifa~l~~~~e~~~~~~~f~s~~~a~y~a~vTltTVGYGDi~p~t~~~~i~~~~~~i~g 394 (542)
.+..+.+.+..+++++. +.+++||++++..++..++..+.+|++|+||+++|+|||||||++|.++.|++++++.+++|
T Consensus 41 ~l~~~~~~ll~~~~~~~~~~~l~fa~ly~~~~~~~~~~~~~s~~~a~yfs~vT~tTvGYGDi~P~t~~gr~~~~~~~l~G 120 (301)
T 1xl4_A 41 LLTVSWPVFITLITGLYLVTNALFALAYLACGDVIENARPGSFTDAFFFSVQTMATIGYGKLIPIGPLANTLVTLEALCG 120 (301)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCSCSTTSCTTCHHHHHHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCcCCHHHHHHHhhhheeccCCCCCcCCCHHHHHHHHHHHHHH
Confidence 34445555555444443 44578888844444445556789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy13459 395 VLVIALPVPVIVSNFSR 411 (542)
Q Consensus 395 ~~~~al~i~~i~~~f~~ 411 (542)
+++++++++++.+.+++
T Consensus 121 ~~~~a~~~g~v~~~~~~ 137 (301)
T 1xl4_A 121 MLGLAVAASLIYARFTR 137 (301)
T ss_dssp HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999999864
No 26
>1p7b_A Integral membrane channel and cytosolic domains; transmembrane helices, ION conduction, immunoglobulin fold, assembly; 3.65A {Burkholderia pseudomallei} SCOP: b.1.18.16 f.14.1.1 PDB: 2wll_B* 2wll_A*
Probab=99.47 E-value=1e-13 Score=140.50 Aligned_cols=97 Identities=21% Similarity=0.345 Sum_probs=78.3
Q ss_pred hhhccchhhHHHHHHHHHHHHHHHHHhhhhccC-CCCCCCCccchhhhHHHhhhhccccCCCCcccchhhHHHHHHHHHH
Q psy13459 316 TLKSCASELGFLVFSLAMAIIIFATVMFYAEKN-VDGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSG 394 (542)
Q Consensus 316 ~l~~s~~~l~~ll~~l~~~i~ifa~l~~~~e~~-~~~~~f~s~~~a~y~a~vTltTVGYGDi~p~t~~~~i~~~~~~i~g 394 (542)
.+..+.+.+..+++++++++++++.++|+++++ .++..+.+|.+|+||+++|+|||||||++|.++.|++++++++++|
T Consensus 55 ~l~~~~~~ll~~~~~~~l~~~l~fally~~e~~~~~~~~~~s~~~a~yfs~vT~tTVGYGDi~P~t~~gr~~~~~~~l~G 134 (333)
T 1p7b_A 55 ALKVSWPVFFASLAALFVVNNTLFALLYQLGDAPIANQSPPGFVGAFFFSVETLATVGYGDMHPQTVYAHAIATLEIFVG 134 (333)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHHHHHTTTSSSSSCCCCSSSSSTHHHHHHHTTTTTTCCCSCCCCCSHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCcHHHhHhhhheeeeecCCCCCcCCCHHHHHHHHHHHHHH
Confidence 344555666666666655555555555777764 3445678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy13459 395 VLVIALPVPVIVSNFSRI 412 (542)
Q Consensus 395 ~~~~al~i~~i~~~f~~~ 412 (542)
++++++++|++.+.+++.
T Consensus 135 ~~~~a~~ig~i~~~~~~~ 152 (333)
T 1p7b_A 135 MSGIALSTGLVFARFARP 152 (333)
T ss_dssp HHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998754
No 27
>2qks_A KIR3.1-prokaryotic KIR channel chimera; G-protein gated inward rectifier, potassium channel selectivity filter, metal transport; HET: BNG; 2.20A {Burkholderia xenovorans}
Probab=99.43 E-value=3.4e-13 Score=136.32 Aligned_cols=79 Identities=27% Similarity=0.405 Sum_probs=68.3
Q ss_pred HHHHHHHHHHhhhhccCCCCCCCC--ccchhhhHHHhhhhccccCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13459 332 AMAIIIFATVMFYAEKNVDGTNFT--SIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNF 409 (542)
Q Consensus 332 ~~~i~ifa~l~~~~e~~~~~~~f~--s~~~a~y~a~vTltTVGYGDi~p~t~~~~i~~~~~~i~g~~~~al~i~~i~~~f 409 (542)
++.+++||. ++.|++....++. +|++|+||+++|||||||||++|.|..|++++++++++|++++++++|++++.+
T Consensus 54 ~~~~~~fa~--~~~eg~~~~~~~~~~s~~~a~y~s~vT~tTVGYGDi~P~t~~gr~~~~~~~l~G~~~~a~~~g~i~~~~ 131 (321)
T 2qks_A 54 LLLNTAFAT--LYMLGSAPIANQFPAGFGGAFFFSVETLATVGYGDMHPQTVYAHWIATLEIFVGMSSIALATGCAFIKM 131 (321)
T ss_dssp HHHHHHHHH--HHHTSSSCBTTCSSTTHHHHHHHHHHHHTTCCCCSSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH--HHHcCCccccCcCCcchhheeeeeeEEeccccCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566772 2566655556777 999999999999999999999999999999999999999999999999999998
Q ss_pred HHH
Q psy13459 410 SRI 412 (542)
Q Consensus 410 ~~~ 412 (542)
++.
T Consensus 132 ~~~ 134 (321)
T 2qks_A 132 SQP 134 (321)
T ss_dssp HSC
T ss_pred HHH
Confidence 763
No 28
>3um7_A Potassium channel subfamily K member 4; potassium ION channel, metal transport; 3.31A {Homo sapiens}
Probab=99.23 E-value=4.2e-12 Score=126.96 Aligned_cols=77 Identities=23% Similarity=0.266 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHhhhhccCCCCCCCCccchhhhHHHhhhhccccCCCCcccchhh------HHHHHHHHHHHHHHHHHHHH
Q psy13459 331 LAMAIIIFATVMFYAEKNVDGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGK------IVGGVCSLSGVLVIALPVPV 404 (542)
Q Consensus 331 l~~~i~ifa~l~~~~e~~~~~~~f~s~~~a~y~a~vTltTVGYGDi~p~t~~~~------i~~~~~~i~g~~~~al~i~~ 404 (542)
+++++++.+.+++..|+ .+|.||+||+++|+|||||||++|.+..|| +++++++++|+.++++++++
T Consensus 206 ~~~~l~~ga~~~~~~E~-------~~~~da~y~~~vTltTvGyGd~~p~t~~g~~~~~y~~~~~~~il~Gl~~~a~~~~~ 278 (309)
T 3um7_A 206 CLLFVLTPTFVFCYMED-------WSKLEAIYFVIVTLTTVGFGDYVAGADPRQDSPAYQPLVWFWILLGLAYFASVLTT 278 (309)
T ss_dssp HHHHTHHHHHHHHHHHC-------CCHHHHHHHHHHHHTTCCCSSCCTTCCTTCCCSTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcC-------CCHHHHHHHHHhheeccccCCCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555666666664 489999999999999999999999999998 49999999999999999999
Q ss_pred HHHHHHHHHH
Q psy13459 405 IVSNFSRIYH 414 (542)
Q Consensus 405 i~~~f~~~~~ 414 (542)
+.+.+....+
T Consensus 279 i~~~~~~~~~ 288 (309)
T 3um7_A 279 IGNWLRVVSR 288 (309)
T ss_dssp HHHHTTTTTT
T ss_pred HHHHHHHHHH
Confidence 9888775543
No 29
>3ukm_A Potassium channel subfamily K member 1; membrane protein, eukaryotic, two-pore DO potassium channel, K2P channel, membrane; HET: UND; 3.40A {Homo sapiens}
Probab=99.21 E-value=2.4e-11 Score=119.72 Aligned_cols=73 Identities=21% Similarity=0.280 Sum_probs=60.4
Q ss_pred HHHHHHHHHhhhhccCCCCCCCCccchhhhHHHhhhhccccCCCCcccch-------hhHHHHHHHHHHHHHHHHHHHHH
Q psy13459 333 MAIIIFATVMFYAEKNVDGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIA-------GKIVGGVCSLSGVLVIALPVPVI 405 (542)
Q Consensus 333 ~~i~ifa~l~~~~e~~~~~~~f~s~~~a~y~a~vTltTVGYGDi~p~t~~-------~~i~~~~~~i~g~~~~al~i~~i 405 (542)
+.+++.+.+++.+|++ .++.||+||+++|+|||||||++|.+.. ||+++++++++|+++++++++.+
T Consensus 184 ~~~~~ga~~~~~~E~~------~s~~da~y~~~iTltTvGyGD~~p~t~~~~~~~~l~r~~~~~~il~Gl~~~~~~~~~i 257 (280)
T 3ukm_A 184 CFFFIPAAVFSVLEDD------WNFLESFYFCFISLSTIGLGDYVPGEGYNQKFRELYKIGITCYLLLGLIAMLVVLETF 257 (280)
T ss_dssp HHTHHHHHHHHHHSSS------CCHHHHHHHHHHHHTTCCCCSCCSSCSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHhcC------CchhhhhhheeeeeecccCCCCCCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555566642 5899999999999999999999999985 59999999999999999999999
Q ss_pred HHHHHH
Q psy13459 406 VSNFSR 411 (542)
Q Consensus 406 ~~~f~~ 411 (542)
.+....
T Consensus 258 ~~~~~~ 263 (280)
T 3ukm_A 258 CELHEL 263 (280)
T ss_dssp HTSHHH
T ss_pred HHHHHH
Confidence 876654
No 30
>3um7_A Potassium channel subfamily K member 4; potassium ION channel, metal transport; 3.31A {Homo sapiens}
Probab=99.21 E-value=6.4e-11 Score=118.39 Aligned_cols=60 Identities=20% Similarity=0.386 Sum_probs=56.6
Q ss_pred CccchhhhHHHhhhhccccCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13459 355 TSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSRIYH 414 (542)
Q Consensus 355 ~s~~~a~y~a~vTltTVGYGDi~p~t~~~~i~~~~~~i~g~~~~al~i~~i~~~f~~~~~ 414 (542)
++|++|+||+++|+|||||||++|.|..||+++++++++|+.+++++++.+++.+.+...
T Consensus 114 w~~~~a~yf~~~t~tTvGYGdi~P~T~~gk~~~i~~~l~Gi~~~~~~~~~i~~~l~~~~~ 173 (309)
T 3um7_A 114 WDLGSAFFFSGTIITTIGYGNVALRTDAGRLFCIFYALVGIPLFGILLAGVGDRLGSSLR 173 (309)
T ss_dssp CSHHHHHHHHHHHHTSCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhhhhHhhheeeeecccCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 689999999999999999999999999999999999999999999999999998877543
No 31
>3sya_A G protein-activated inward rectifier potassium CH; ION channel, potassium channel, inward rectification, sodium PIP2 binding, G protein binding; HET: PIO; 2.98A {Mus musculus} PDB: 3syo_A 3syc_A 3syp_A 3syq_A*
Probab=99.20 E-value=1.8e-11 Score=123.79 Aligned_cols=84 Identities=26% Similarity=0.365 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHhhhhc---cCCC---C-------CCCCccchhhhHHHhhhhccccCCCCcc--cchhhHHHHHHHHHH
Q psy13459 330 SLAMAIIIFATVMFYAE---KNVD---G-------TNFTSIPAAFWYTIVTMTTLGYGDMVPE--TIAGKIVGGVCSLSG 394 (542)
Q Consensus 330 ~l~~~i~ifa~l~~~~e---~~~~---~-------~~f~s~~~a~y~a~vTltTVGYGDi~p~--t~~~~i~~~~~~i~g 394 (542)
..++.+++||+++|.+. ++.. + .++.+|++||||+++|+|||||||++|. ++.|++++++.+++|
T Consensus 52 ~y~~swl~Fa~ly~~ia~~~Gdl~~~~~~~~~~Cv~~~~sf~~af~fSv~T~TTvGYGd~~p~~~~~~g~~l~~~~~l~G 131 (340)
T 3sya_A 52 VYTVTWLFFGMIWWLIAYIRGDMDHIEDPSWTPCVTNLNGFVSAFLFSIETETTIGYGYRVITDKCPEGIILLLIQSVLG 131 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTCSSCSSCCCSBSCCCSTTHHHHHHHHHHSCCCCSSSCBCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccccccchhccccCHHHHHhhhheeeeeecCCCccCcCcCHHHHHHHHHHHHHH
Confidence 34455668888877542 2211 0 3578999999999999999999999997 789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy13459 395 VLVIALPVPVIVSNFSRIY 413 (542)
Q Consensus 395 ~~~~al~i~~i~~~f~~~~ 413 (542)
++++++++|++...+++..
T Consensus 132 ~~l~a~~~giv~ak~srp~ 150 (340)
T 3sya_A 132 SIVNAFMVGCMFVKISQPK 150 (340)
T ss_dssp HHHHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHHHHHhHHh
Confidence 9999999999999998654
No 32
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=99.19 E-value=5.4e-13 Score=136.69 Aligned_cols=74 Identities=28% Similarity=0.451 Sum_probs=60.8
Q ss_pred HHHHHHHHHhh-hhccCCCCCCCCccchhhhHHHhhhhccccCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13459 333 MAIIIFATVMF-YAEKNVDGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSR 411 (542)
Q Consensus 333 ~~i~ifa~l~~-~~e~~~~~~~f~s~~~a~y~a~vTltTVGYGDi~p~t~~~~i~~~~~~i~g~~~~al~i~~i~~~f~~ 411 (542)
++++++++++| ++|+ ++|.+|+||+++|+|||||||++|.|+.||+++++++++|+++++++++.+.+.+.+
T Consensus 28 ~~~~~~~~~~~~~~e~-------~~~~~a~y~~~~t~tTvGyGd~~p~t~~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~ 100 (336)
T 1lnq_A 28 LAVIIYGTAGFHFIEG-------ESWTVSLYWTFVTIATVGYGDYSPSTPLGMYFTVTLIVLGIGTFAVAVERLLEFLIN 100 (336)
T ss_dssp TTSHHHHTTTTTTSSS-------CCSSTTHHHHHHHHTTCCCSSCCCCCSSHHHHHTHHHHTTSTTTTTHHHHHTTTC--
T ss_pred HHHHHHHHHHHHHHhC-------CCHHHHHHHHHHHhhcccCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445555554 5554 489999999999999999999999999999999999999999999999999998876
Q ss_pred HH
Q psy13459 412 IY 413 (542)
Q Consensus 412 ~~ 413 (542)
..
T Consensus 101 ~~ 102 (336)
T 1lnq_A 101 RE 102 (336)
T ss_dssp --
T ss_pred HH
Confidence 44
No 33
>3spc_A Inward-rectifier K+ channel KIR2.2; PIP, membrane protein, lipid, receptor, metal transport; HET: P8P; 2.45A {Gallus gallus} PDB: 3jyc_A* 3spi_A* 3sph_A* 3spj_A 3spg_A*
Probab=99.12 E-value=6.1e-11 Score=120.10 Aligned_cols=85 Identities=19% Similarity=0.338 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHhhhh---ccCC----CC-------CCCCccchhhhHHHhhhhccccCCCCcc--cchhhHHHHHHHH
Q psy13459 329 FSLAMAIIIFATVMFYA---EKNV----DG-------TNFTSIPAAFWYTIVTMTTLGYGDMVPE--TIAGKIVGGVCSL 392 (542)
Q Consensus 329 ~~l~~~i~ifa~l~~~~---e~~~----~~-------~~f~s~~~a~y~a~vTltTVGYGDi~p~--t~~~~i~~~~~~i 392 (542)
+..++.+++||+++|++ +++. ++ .++.+|++||||+++|+|||||||++|. ++.|++++++.++
T Consensus 53 ~~y~~swl~Fally~~ia~~~gdl~~~~~~~~~~~Cv~~~~sf~~af~fSv~T~TTvGYGd~~p~~~~~~~~~l~~~~~l 132 (343)
T 3spc_A 53 LAFLVSWLLFGLIFWLIALIHGDLENPGGDDTFKPCVLQVNGFVAAFLFSIETQTTIGYGFRCVTEECPLAVFMVVVQSI 132 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTGGGCTTCCSSCCCSEETCCSHHHHHHHHHHHHSCCCCSSSEECSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccCCHHHHhheeeeeeEeecCCCccCCCCCHHHHHHHHHHHH
Confidence 34455667888877653 2211 11 2578999999999999999999999974 8999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy13459 393 SGVLVIALPVPVIVSNFSRIY 413 (542)
Q Consensus 393 ~g~~~~al~i~~i~~~f~~~~ 413 (542)
+|++++++++|++...+++..
T Consensus 133 ~G~~l~a~~~giv~ak~srp~ 153 (343)
T 3spc_A 133 VGCIIDSFMIGAIMAKMARPK 153 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHHHHHHhhHH
Confidence 999999999999999997643
No 34
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=99.11 E-value=1.1e-10 Score=127.84 Aligned_cols=85 Identities=31% Similarity=0.491 Sum_probs=64.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhhh----hccCCCCCCCCccchhhhHHHhhhhccccCCCCcccchhhHHHHHHHHHHHHHH
Q psy13459 323 ELGFLVFSLAMAIIIFATVMFY----AEKNVDGTNFTSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVI 398 (542)
Q Consensus 323 ~l~~ll~~l~~~i~ifa~l~~~----~e~~~~~~~f~s~~~a~y~a~vTltTVGYGDi~p~t~~~~i~~~~~~i~g~~~~ 398 (542)
.+...+++++++++++++++++ .|+. .++|++|+||+++|+|||||||++|.|+.||+++++++++|++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-----~~~~~~~~y~~~~t~tTvGygd~~p~~~~~~~~~~~~~~~g~~~~ 93 (565)
T 4gx0_A 19 VLLLYCAFLLVMLLAYASIFRYLMWHLEGR-----AYSFMAGIYWTITVMTTLGFGDITFESDAGYLFASIVTVSGVIFL 93 (565)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCCHHHHHHHHHHHHTTCCCCSSCCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-----CCchhhhhheeeeeeeeecCCCcCCCCccHHHHHHHHHHHHHHHH
Confidence 3444444444444555554443 4442 248999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HHHHHHHH
Q psy13459 399 ALPVPV-IVSNFSRI 412 (542)
Q Consensus 399 al~i~~-i~~~f~~~ 412 (542)
+++++. +.+.+...
T Consensus 94 ~~~~~~~~~~~~~~~ 108 (565)
T 4gx0_A 94 DIILPFGFVSMFLAP 108 (565)
T ss_dssp HTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999988 55555443
No 35
>3ukm_A Potassium channel subfamily K member 1; membrane protein, eukaryotic, two-pore DO potassium channel, K2P channel, membrane; HET: UND; 3.40A {Homo sapiens}
Probab=99.07 E-value=2.8e-10 Score=112.05 Aligned_cols=58 Identities=22% Similarity=0.371 Sum_probs=54.4
Q ss_pred CccchhhhHHHhhhhccccCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13459 355 TSIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSRI 412 (542)
Q Consensus 355 ~s~~~a~y~a~vTltTVGYGDi~p~t~~~~i~~~~~~i~g~~~~al~i~~i~~~f~~~ 412 (542)
++|++|+||+++|+|||||||++|.|..||+++++++++|+.++++.++.+.+.+...
T Consensus 92 w~~~~a~yf~~~t~tTvGyGd~~P~T~~Gk~f~~~~~l~Gi~~~~~~~~~~~~~l~~~ 149 (280)
T 3ukm_A 92 WDFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVH 149 (280)
T ss_dssp SSHHHHHHHHHHHHTTCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhcchhheeeeeeccccCCcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999988777654
No 36
>1s6c_B Potassium voltage-gated channel subfamily D membe; EF-hand, transport protein; 2.00A {Rattus norvegicus}
Probab=98.78 E-value=5.1e-10 Score=69.55 Aligned_cols=29 Identities=76% Similarity=1.476 Sum_probs=18.6
Q ss_pred Ccc-cccccchhhhhcCCCCCCCCCCCCCC
Q psy13459 1 MAS-VAAWLPFARAAAIGWVPIATHPLPPP 29 (542)
Q Consensus 1 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (542)
|++ |++|+||+|++++||.|+++++||+|
T Consensus 1 Maa~v~~w~~far~a~igw~P~a~~~~p~~ 30 (30)
T 1s6c_B 1 MAAGVAAWLPFARAAAIGWMPVASGPMPAP 30 (30)
T ss_dssp CHHHHHTTHHHHHHHHHTTCC---------
T ss_pred CchhhhhhcccchhhcccccccccCCCCCC
Confidence 555 99999999999999999999999864
No 37
>4f4l_A ION transport protein; alpha helical membrane protein, voltage-gated sodium channel membrane, metal transport; 3.49A {Magnetococcus marinus}
Probab=98.59 E-value=2.5e-08 Score=85.07 Aligned_cols=95 Identities=15% Similarity=0.095 Sum_probs=64.6
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCccchhhhHHHhhhhccccCCCC--c---ccchhhHH-HHHHHHHH
Q psy13459 321 ASELGFLVFSLAMAIIIFATVMFYAEKNVDGTNFTSIPAAFWYTIVTMTTLGYGDMV--P---ETIAGKIV-GGVCSLSG 394 (542)
Q Consensus 321 ~~~l~~ll~~l~~~i~ifa~l~~~~e~~~~~~~f~s~~~a~y~a~vTltTVGYGDi~--p---~t~~~~i~-~~~~~i~g 394 (542)
...++.+++++++++++||.++..+.++..+.+|++++.|+...++.+|+-||.|.. | ..+...+| +++++++.
T Consensus 3 ~~g~~nv~~ll~l~~~ifAi~G~~lFg~~~~~~F~~~~~s~ltLF~i~T~e~W~~~~~~~~~~~~~~a~iyFi~fi~i~~ 82 (112)
T 4f4l_A 3 HMGVGSVAALLTVVFYIAAVMATNLYGATFPEWFGDLSKSLYTLFQVMTLESWSMGIVRPVMNVHPNAWVFFIPFIMLTT 82 (112)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHTTTCHHHHSSHHHHHHHHHHHHTTTTCCCCCHHHHTTTSTTTHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHCCCccccccCHHHHHHHHHHHHHccccHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 455777888888999999999998888888889999999999999999999997642 2 23334444 55555566
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy13459 395 VLVIALPVPVIVSNFSRIYHQ 415 (542)
Q Consensus 395 ~~~~al~i~~i~~~f~~~~~~ 415 (542)
++++|++++++.++|++..++
T Consensus 83 fi~lNLfiaVi~~~f~~~~~~ 103 (112)
T 4f4l_A 83 FTVLNLFIGIIVDAMAITKEQ 103 (112)
T ss_dssp HHHHHHHTTTC----------
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999999875444
No 38
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=96.06 E-value=0.002 Score=54.95 Aligned_cols=76 Identities=18% Similarity=0.237 Sum_probs=57.5
Q ss_pred eEEEEeCCeEEEeeHHHHhcCCCCccccCCCCCccCCCCceEEE-ecCCcchHHhhcccccCcccCCCCCCHHHHHHHHh
Q psy13459 42 KLLINVSGRRFETWRNTLEKYPDSLLGSNEREFFYDEDSKEYFF-DRDPDIFRHILNYYRTGKLHYPKHECLTSYDEELA 120 (542)
Q Consensus 42 ~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~~~~~~~~~~~f~-DRd~~~F~~Il~~~r~g~l~~p~~~~~~~~~~E~~ 120 (542)
-|+|.|||+.|...+..|...-.- +.. ..+++-+ |=+|+.|+.+|+|+.||++.+.. .....+.+=|+
T Consensus 32 Dv~l~v~~~~f~aHk~vLaa~S~y-F~~---------~~~~i~l~~v~~~~f~~ll~fiYtg~~~i~~-~~v~~ll~aA~ 100 (119)
T 3m5b_A 32 DTLITVGSQEFPAHSLVLAGVSQQ-LGR---------RGQWALGEGISPSTFAQLLNFVYGESVELQP-GELRPLQEAAR 100 (119)
T ss_dssp CEEEEETTEEEEECHHHHHTTCGG-GCC---------CEEEECCSSCCHHHHHHHHHHHTTCCEEECG-GGHHHHHHHHH
T ss_pred ceEEEECCEEEeeEHHHHHHcCHH-Hhc---------CCCEEEeCCCCHHHHHHHHHHHcCCCcCcCH-HHHHHHHHHHH
Confidence 588999999999999999875322 211 1233333 45799999999999999998644 34677888999
Q ss_pred hcCCCCcc
Q psy13459 121 FFGILPDV 128 (542)
Q Consensus 121 f~~l~~~~ 128 (542)
+|+++...
T Consensus 101 ~l~i~~l~ 108 (119)
T 3m5b_A 101 ALGVQSLE 108 (119)
T ss_dssp HTTCHHHH
T ss_pred HhCCHHHH
Confidence 99997654
No 39
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=95.75 E-value=0.0037 Score=53.65 Aligned_cols=85 Identities=15% Similarity=0.218 Sum_probs=62.6
Q ss_pred ceEEEEeCCeEEEeeHHHHhcCCCCccccCCCCCccCCCCceEEE--ecCCcchHHhhcccccCcccCCCCCCHHHHHHH
Q psy13459 41 EKLLINVSGRRFETWRNTLEKYPDSLLGSNEREFFYDEDSKEYFF--DRDPDIFRHILNYYRTGKLHYPKHECLTSYDEE 118 (542)
Q Consensus 41 ~~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~~~~~~~~~~~f~--DRd~~~F~~Il~~~r~g~l~~p~~~~~~~~~~E 118 (542)
.-|+|.|||+.|...+..|...- ..+..+...... ...+++-+ |-+|+.|+.+|+|+.||++.++. .....+..-
T Consensus 30 ~Dv~l~v~~~~~~aHk~iLaa~S-~~F~~~f~~~~~-e~~~~i~l~~~~~~~~f~~ll~~~Ytg~~~~~~-~~~~~ll~~ 106 (127)
T 1r29_A 30 TDVVIVVSREQFRAHKTVLMACS-GLFYSIFTDQLK-RNLSVINLDPEINPEGFNILLDFMYTSRLNLRE-GNIMAVMAT 106 (127)
T ss_dssp CCEEEEETTEEEEECHHHHHHHC-HHHHHHHTSTTT-TTCSEEECCTTSCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHH
T ss_pred CCEEEEECCEEEehHHHHHHHhC-HHHHHHhcCCcc-CCCCEEEeCCCCCHHHHHHHHHHHcCCCcCcCH-HHHHHHHHH
Confidence 35889999999999999997642 123222111111 15677888 67999999999999999998654 457788899
Q ss_pred HhhcCCCCcc
Q psy13459 119 LAFFGILPDV 128 (542)
Q Consensus 119 ~~f~~l~~~~ 128 (542)
|++|+++.+.
T Consensus 107 A~~~~i~~L~ 116 (127)
T 1r29_A 107 AMYLQMEHVV 116 (127)
T ss_dssp HHHTTCHHHH
T ss_pred HHHhCCHHHH
Confidence 9999996653
No 40
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=95.55 E-value=0.0041 Score=53.62 Aligned_cols=81 Identities=20% Similarity=0.219 Sum_probs=62.2
Q ss_pred eEEEEeCCeEEEeeHHHHhcCCCCccccCCCCCccCCCCceEEE--ecCCcchHHhhcccccCcccCCCCCCHHHHHHHH
Q psy13459 42 KLLINVSGRRFETWRNTLEKYPDSLLGSNEREFFYDEDSKEYFF--DRDPDIFRHILNYYRTGKLHYPKHECLTSYDEEL 119 (542)
Q Consensus 42 ~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~~~~~~~~~~~f~--DRd~~~F~~Il~~~r~g~l~~p~~~~~~~~~~E~ 119 (542)
-|+|.|||+.|...+..|.... ..+..+... ...+++.+ |=+|+.|+.+|+|+.||++.++.+ ....+.+-|
T Consensus 35 Dv~l~v~~~~~~~Hk~vLaa~S-~~F~~~f~~----~~~~~i~l~~~~~~~~f~~ll~~iYtg~~~i~~~-~~~~ll~~A 108 (129)
T 3ga1_A 35 DVSVVVKGHAFKAHRAVLAASS-SYFRDLFNN----SRSAVVELPAAVQPQSFQQILSFCYTGRLSMNVG-DQDLLMYTA 108 (129)
T ss_dssp CEEEEETTEEEEECHHHHHHHB-HHHHHHHHH----CCCSEEECCTTCCHHHHHHHHHHHHHSEEECCTT-THHHHHHHH
T ss_pred ceEEEECCEEEEehHHHHHHcC-HHHHHHHcC----CCCCEEEECCCCCHHHHHHHHHHHhCCccccCHH-HHHHHHHHH
Confidence 4788999999999999998642 122222111 15677888 578999999999999999987554 467788999
Q ss_pred hhcCCCCcc
Q psy13459 120 AFFGILPDV 128 (542)
Q Consensus 120 ~f~~l~~~~ 128 (542)
++|+++.+.
T Consensus 109 ~~~~i~~l~ 117 (129)
T 3ga1_A 109 GFLQIQEIM 117 (129)
T ss_dssp HHTTBTTSS
T ss_pred HHhCCHHHH
Confidence 999998764
No 41
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=95.26 E-value=0.01 Score=49.94 Aligned_cols=80 Identities=19% Similarity=0.333 Sum_probs=59.5
Q ss_pred eEEEEeCCeEEEeeHHHHhcCCCCccccCCCCCccCCCCceEEEe---cCCcchHHhhcccccCcccCCCCCCHHHHHHH
Q psy13459 42 KLLINVSGRRFETWRNTLEKYPDSLLGSNEREFFYDEDSKEYFFD---RDPDIFRHILNYYRTGKLHYPKHECLTSYDEE 118 (542)
Q Consensus 42 ~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~~~~~~~~~~~f~D---Rd~~~F~~Il~~~r~g~l~~p~~~~~~~~~~E 118 (542)
-|+|.|||+.|...+..|...- ..+..+.... ..+++-++ -+|+.|+.+|+|+.+|++.++. .....+..-
T Consensus 24 Dv~l~v~~~~~~aHk~vLaa~S-~yF~~~f~~~----~~~~i~l~~~~~~~~~f~~ll~~~Yt~~~~~~~-~~v~~ll~~ 97 (116)
T 2vpk_A 24 DCTIVIGEFQFKAHRNVLASFS-EYFGAIYRST----SENNVFLDQSQVKADGFQKLLEFIYTGTLNLDS-WNVKEIHQA 97 (116)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHTTC----CCSCEECCTTTCCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHH
T ss_pred cEEEEECCEEEeccHHHHhhcC-HHHHHHHcCC----CCCeEEeecCCCCHHHHHHHHHHHcCCCcccCH-HHHHHHHHH
Confidence 5889999999999999997632 1232221111 35566664 6899999999999999998654 357788889
Q ss_pred HhhcCCCCc
Q psy13459 119 LAFFGILPD 127 (542)
Q Consensus 119 ~~f~~l~~~ 127 (542)
|++|+++.+
T Consensus 98 A~~~~i~~L 106 (116)
T 2vpk_A 98 ADYLKVEEV 106 (116)
T ss_dssp HHHTTCHHH
T ss_pred HHHhCCHHH
Confidence 999999654
No 42
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=95.11 E-value=0.014 Score=49.85 Aligned_cols=83 Identities=13% Similarity=0.094 Sum_probs=60.5
Q ss_pred eEEEEeCCeEEEeeHHHHhcCCCCccccCCCCCccCCCCceEEEe--cCCcchHHhhcccccCcccCCCCCCHHHHHHHH
Q psy13459 42 KLLINVSGRRFETWRNTLEKYPDSLLGSNEREFFYDEDSKEYFFD--RDPDIFRHILNYYRTGKLHYPKHECLTSYDEEL 119 (542)
Q Consensus 42 ~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~~~~~~~~~~~f~D--Rd~~~F~~Il~~~r~g~l~~p~~~~~~~~~~E~ 119 (542)
-|+|.|||+.|...+..|...- ..+..+..... .+..++-+. =+++.|+.+|+|+.||++.++. .....+.+-|
T Consensus 34 Dv~l~v~~~~f~aHk~vLaa~S-~yF~~~f~~~~--~e~~~i~l~~~~~~~~f~~~l~~iYtg~~~~~~-~~v~~ll~~A 109 (125)
T 3ohu_A 34 DVTLIVERKEFRAHRAVLAACS-EYFWQALVGQT--KNDLVVSLPEEVTARGFGPLLQFAYTAKLLLSR-ENIREVIRCA 109 (125)
T ss_dssp CEEEEETTEEEEECHHHHHHHB-HHHHHHHTTCC--CSSCEEECCTTCCHHHHHHHHHHHTTSEEEECT-TTHHHHHHHH
T ss_pred ceEEEECCEEEechHHHHHHcC-HHHHHHhcCCC--CCCcEEEeCCCCCHHHHHHHHHhHcCCceEECH-HHHHHHHHHH
Confidence 4788899999999999998742 12222211111 225566663 5899999999999999998754 3567888999
Q ss_pred hhcCCCCcc
Q psy13459 120 AFFGILPDV 128 (542)
Q Consensus 120 ~f~~l~~~~ 128 (542)
++|+++.+.
T Consensus 110 ~~l~i~~L~ 118 (125)
T 3ohu_A 110 EFLRMHNLE 118 (125)
T ss_dssp HHHTBSSCT
T ss_pred HHhCCHHHH
Confidence 999998764
No 43
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=94.85 E-value=0.0087 Score=51.15 Aligned_cols=83 Identities=18% Similarity=0.206 Sum_probs=59.1
Q ss_pred eEEEEeCCeEEEeeHHHHhcCCCCccccCCCCCccCCCCceEEE--ecCCcchHHhhcccccCcccCCCCCCHHHHHHHH
Q psy13459 42 KLLINVSGRRFETWRNTLEKYPDSLLGSNEREFFYDEDSKEYFF--DRDPDIFRHILNYYRTGKLHYPKHECLTSYDEEL 119 (542)
Q Consensus 42 ~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~~~~~~~~~~~f~--DRd~~~F~~Il~~~r~g~l~~p~~~~~~~~~~E~ 119 (542)
-|+|.|||+.|...+..|...- ..+..+..... .+..++-+ |-+++.|+.+|+|+.||++.++.+ ....+..-|
T Consensus 31 Dv~l~v~~~~~~aHk~vLaa~S-~yF~~mf~~~~--~e~~~i~l~~~v~~~~f~~lL~~iYtg~~~i~~~-~v~~ll~~A 106 (124)
T 2ihc_A 31 DVTIFVEGQRFRAHRSVLAACS-SYFHSRIVGQA--DGELNITLPEEVTVKGFEPLIQFAYTAKLILSKE-NVDEVCKCV 106 (124)
T ss_dssp CEEEEETTEEEEECHHHHHHHB-HHHHHHHTTC-----CEEEECCTTSCHHHHHHHHHHHHHSEEEEETT-THHHHHHHH
T ss_pred CEEEEECCEEEecHHHHHHHcC-HHHHHHHcCCC--CCCceEeecCCcCHHHHHHHHHHhcCCCcccCHH-HHHHHHHHH
Confidence 5789999999999999998632 12222211111 12345555 568899999999999999976543 477888999
Q ss_pred hhcCCCCcc
Q psy13459 120 AFFGILPDV 128 (542)
Q Consensus 120 ~f~~l~~~~ 128 (542)
++|+++.+.
T Consensus 107 ~~~~~~~L~ 115 (124)
T 2ihc_A 107 EFLSVHNIE 115 (124)
T ss_dssp HHHTBSSCC
T ss_pred HHHCCHHHH
Confidence 999998774
No 44
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=94.72 E-value=0.0075 Score=51.09 Aligned_cols=86 Identities=14% Similarity=0.122 Sum_probs=58.9
Q ss_pred ceEEEEeCCeEEEeeHHHHhcCCCCccccCCCCCccCCCCceEEE-ecCCcchHHhhcccccCcccCCCCCCHHHHHHHH
Q psy13459 41 EKLLINVSGRRFETWRNTLEKYPDSLLGSNEREFFYDEDSKEYFF-DRDPDIFRHILNYYRTGKLHYPKHECLTSYDEEL 119 (542)
Q Consensus 41 ~~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~~~~~~~~~~~f~-DRd~~~F~~Il~~~r~g~l~~p~~~~~~~~~~E~ 119 (542)
.-|+|.|||+.|...+..|...- ..+..+..........+++-+ |=+|+.|+.+|+|+.||++.++.+ ....+.+-|
T Consensus 26 ~Dv~l~v~~~~~~aHk~vLaa~S-~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~Yt~~~~~~~~-~~~~ll~~A 103 (120)
T 2if5_A 26 CDVVILVEGREFPTHRSVLAACS-QYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFAYTATLTVSTA-NVGDILSAA 103 (120)
T ss_dssp CCEEEEETTEEEEECHHHHHHHC-HHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHHHHSCCCCCGG-GHHHHHHHH
T ss_pred CCeEEEECCEEEeHHHHHHHHhC-HHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHHcCCCCccCHH-HHHHHHHHH
Confidence 35889999999999999998632 122222111111123445555 458899999999999999976543 467788899
Q ss_pred hhcCCCCcc
Q psy13459 120 AFFGILPDV 128 (542)
Q Consensus 120 ~f~~l~~~~ 128 (542)
++|+++.+.
T Consensus 104 ~~~~i~~L~ 112 (120)
T 2if5_A 104 RLLEIPAVS 112 (120)
T ss_dssp HHTTCHHHH
T ss_pred HHhCCHHHH
Confidence 999996653
No 45
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=94.71 E-value=0.012 Score=48.81 Aligned_cols=83 Identities=12% Similarity=0.087 Sum_probs=59.0
Q ss_pred eEEEEeCC----eEEEeeHHHHhcCCCCccccCCCCCccCCCCceEEE-ecCCcchHHhhcccccCcccCCCCCCHHHHH
Q psy13459 42 KLLINVSG----RRFETWRNTLEKYPDSLLGSNEREFFYDEDSKEYFF-DRDPDIFRHILNYYRTGKLHYPKHECLTSYD 116 (542)
Q Consensus 42 ~v~lNVgG----~~f~t~~~tl~~~p~t~l~~~~~~~~~~~~~~~~f~-DRd~~~F~~Il~~~r~g~l~~p~~~~~~~~~ 116 (542)
=|+|.||| +.|...+..|...- ..+..+......... +++-+ |-+|+.|+.+|+|+.+|++.++. .....+.
T Consensus 10 Dv~l~v~~~~~~~~~~~Hk~iLa~~S-~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~-~~~~~ll 86 (109)
T 2vkp_A 10 DVHFVVGPPGATRTVPAHKYVLAVGS-SVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEIDLEA-DTVLATL 86 (109)
T ss_dssp CEEEEESSTTSCEEEEECHHHHHHHC-HHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCT-TTHHHHH
T ss_pred cEEEEECCCCCcEEEEeeHHHHHHcC-HHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCccCCH-HHHHHHH
Confidence 58899999 99999999998632 123322111111122 67777 66999999999999999998765 3457788
Q ss_pred HHHhhcCCCCc
Q psy13459 117 EELAFFGILPD 127 (542)
Q Consensus 117 ~E~~f~~l~~~ 127 (542)
.-|++|+++.+
T Consensus 87 ~~A~~~~~~~L 97 (109)
T 2vkp_A 87 YAAKKYIVPAL 97 (109)
T ss_dssp HHHHHTTCHHH
T ss_pred HHHHHhCcHHH
Confidence 88999998665
No 46
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=94.42 E-value=0.014 Score=49.46 Aligned_cols=81 Identities=15% Similarity=0.149 Sum_probs=59.0
Q ss_pred eEEEEeCCeEEEeeHHHHhcCCCCccccCCCCCccCCCCceEEE-ecCCcchHHhhcccccCcccCCCCCCHHHHHHHHh
Q psy13459 42 KLLINVSGRRFETWRNTLEKYPDSLLGSNEREFFYDEDSKEYFF-DRDPDIFRHILNYYRTGKLHYPKHECLTSYDEELA 120 (542)
Q Consensus 42 ~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~~~~~~~~~~~f~-DRd~~~F~~Il~~~r~g~l~~p~~~~~~~~~~E~~ 120 (542)
-|+|.|||+.|...+..|...- ..+..+.... ..+++-+ |-+|+.|+.+|+|+.||++.++.+ ....+..-|+
T Consensus 26 Dv~l~v~~~~f~aHk~vLaa~S-~yF~~~f~~~----~~~~i~l~~~~~~~f~~ll~~iYtg~~~~~~~-~v~~ll~~A~ 99 (119)
T 3b84_A 26 DATLDVGGLVFKAHWSVLACCS-HFFQSLYGDG----SGGSVVLPAGFAEIFGLLLDFFYTGHLALTSG-NRDQVLLAAR 99 (119)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHTTT----TCCCEEECGGGHHHHHHHHHHHHHSCCCCCTT-THHHHHHHHH
T ss_pred ceEEEECCEEEEeeHHHHhhcC-HHHHHHHCCC----CCCeEEeCCCCHHHHHHHHHHHcCCCCccCHH-HHHHHHHHHH
Confidence 4788999999999999998642 1222221111 1445555 567899999999999999986553 4678888999
Q ss_pred hcCCCCcc
Q psy13459 121 FFGILPDV 128 (542)
Q Consensus 121 f~~l~~~~ 128 (542)
+|+++.+.
T Consensus 100 ~~~i~~L~ 107 (119)
T 3b84_A 100 ELRVPEAV 107 (119)
T ss_dssp HTTCHHHH
T ss_pred HhCcHHHH
Confidence 99996653
No 47
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=94.12 E-value=0.032 Score=48.42 Aligned_cols=81 Identities=14% Similarity=0.133 Sum_probs=59.2
Q ss_pred eEEEEeCCeEEEeeHHHHhcCCCCccccCCCCCccCCCCceEEE-ecCCcchHHhhcccccCcccCCCCCCHHHHHHHHh
Q psy13459 42 KLLINVSGRRFETWRNTLEKYPDSLLGSNEREFFYDEDSKEYFF-DRDPDIFRHILNYYRTGKLHYPKHECLTSYDEELA 120 (542)
Q Consensus 42 ~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~~~~~~~~~~~f~-DRd~~~F~~Il~~~r~g~l~~p~~~~~~~~~~E~~ 120 (542)
-|+|.|||+.|...+..|...- .++..+..... .+++-+ |-+++.|+.+|+|+.||++.++. .....+..-|+
T Consensus 27 Dv~l~v~~~~f~aHk~vLaa~S-~yF~~mf~~~~----~~~i~l~~~~~~~f~~lL~fiYtg~~~i~~-~~v~~ll~~A~ 100 (135)
T 2yy9_A 27 DATLDVGGLVFKAHWSVLACCS-HFFQRIYGDGT----GGSVVLPAGFAEIFGLLLDFFYTGHLALTS-GNRDQVLLAAK 100 (135)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHTCC--------CCEEECGGGHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHH
T ss_pred ceEEEECCEEEehHHHHHHHhC-HHHHHHHcCCC----CCeEEeCCCCHHHHHHHHHHHhCCCCCCCH-HHHHHHHHHHH
Confidence 5788999999999999998642 22333322111 455666 56789999999999999998754 34778889999
Q ss_pred hcCCCCcc
Q psy13459 121 FFGILPDV 128 (542)
Q Consensus 121 f~~l~~~~ 128 (542)
+|+++.+.
T Consensus 101 ~l~i~~L~ 108 (135)
T 2yy9_A 101 ELRVPEAV 108 (135)
T ss_dssp HTTCHHHH
T ss_pred HhCcHHHH
Confidence 99997653
No 48
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=93.85 E-value=0.029 Score=48.84 Aligned_cols=83 Identities=17% Similarity=0.193 Sum_probs=59.3
Q ss_pred eEEEEeCCeEEEeeHHHHhcCCCCccccCCCCCccCCCCceEEE--ecCCcchHHhhcccccCcccCCCCCCHHHHHHHH
Q psy13459 42 KLLINVSGRRFETWRNTLEKYPDSLLGSNEREFFYDEDSKEYFF--DRDPDIFRHILNYYRTGKLHYPKHECLTSYDEEL 119 (542)
Q Consensus 42 ~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~~~~~~~~~~~f~--DRd~~~F~~Il~~~r~g~l~~p~~~~~~~~~~E~ 119 (542)
-|+|.|||+.|...+..|...- ..+..+..... .+..++-+ |=+++.|+.+|+|+.||++.++.+ ....+..=|
T Consensus 38 Dv~l~v~~~~f~aHk~vLaa~S-~yF~~~f~~~~--~e~~~i~l~~~v~~~~~~~lL~~~Ytg~~~i~~~-~v~~ll~~A 113 (138)
T 2z8h_A 38 DVTVLVEGQRFRAHRSVLAACS-SYFHSRIVGQT--DAELTVTLPEEVTVKGFEPLIQFAYTAKLILSKD-NVDEVCRCV 113 (138)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHTTCC--CTTEEEECCTTSCHHHHHHHHHHHHHSCCCCCTT-THHHHHHHH
T ss_pred CeEEEECCEEEechHHHHHHcC-HHHHHHHhcCC--CCCceEEeCCCCCHHHHHHHHHHhcCCCcccCHH-HHHHHHHHH
Confidence 5889999999999999997632 12222211111 12345555 457899999999999999986643 477888899
Q ss_pred hhcCCCCcc
Q psy13459 120 AFFGILPDV 128 (542)
Q Consensus 120 ~f~~l~~~~ 128 (542)
++|+++.+.
T Consensus 114 ~~~~i~~L~ 122 (138)
T 2z8h_A 114 EFLSVHNIE 122 (138)
T ss_dssp HHHTCGGGH
T ss_pred HHhCCHHHH
Confidence 999997764
No 49
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=93.71 E-value=0.023 Score=49.94 Aligned_cols=85 Identities=11% Similarity=0.128 Sum_probs=59.6
Q ss_pred eEEEEeCCeEEEeeHHHHhcCCCCccccCCCCCc--cCCCCceEEE-ecCCcchHHhhcccccCcccCCCCCCHHHHHHH
Q psy13459 42 KLLINVSGRRFETWRNTLEKYPDSLLGSNEREFF--YDEDSKEYFF-DRDPDIFRHILNYYRTGKLHYPKHECLTSYDEE 118 (542)
Q Consensus 42 ~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~~~--~~~~~~~~f~-DRd~~~F~~Il~~~r~g~l~~p~~~~~~~~~~E 118 (542)
-|+|.|||+.|...+..|...- ..+..+..... -.....++-+ |-+|+.|+.+|+|+.||++.++. .....+..=
T Consensus 49 Dv~l~v~~~~f~aHk~vLaa~S-~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYtg~~~i~~-~~v~~ll~~ 126 (144)
T 2ppi_A 49 DAHLVLDGEEIPVQKNILAAAS-PYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQIRLNE-DTIQDVVQA 126 (144)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTTSCCCCCT-TTHHHHHHH
T ss_pred ceEEEECCEEEehHHHHHHHcC-HHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhCCCCCCCH-HHHHHHHHH
Confidence 5889999999999999998632 12222211100 0123556666 56899999999999999997654 356788889
Q ss_pred HhhcCCCCcc
Q psy13459 119 LAFFGILPDV 128 (542)
Q Consensus 119 ~~f~~l~~~~ 128 (542)
|++|+++.+.
T Consensus 127 A~~l~i~~L~ 136 (144)
T 2ppi_A 127 ADLLLLTDLK 136 (144)
T ss_dssp HHHTTCHHHH
T ss_pred HHHhCcHHHH
Confidence 9999996653
No 50
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=93.68 E-value=0.008 Score=52.54 Aligned_cols=85 Identities=12% Similarity=0.208 Sum_probs=59.8
Q ss_pred ceEEEEeCCeEEEeeHHHHhcCCCCccccCCCCCccCCCCceEEE-ecCCcchHHhhcccccCcccCCCCCCHHHHHHHH
Q psy13459 41 EKLLINVSGRRFETWRNTLEKYPDSLLGSNEREFFYDEDSKEYFF-DRDPDIFRHILNYYRTGKLHYPKHECLTSYDEEL 119 (542)
Q Consensus 41 ~~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~~~~~~~~~~~f~-DRd~~~F~~Il~~~r~g~l~~p~~~~~~~~~~E~ 119 (542)
.-|+|.|||+.|...+..|...- ..+..+..........+++-+ |-+|+.|+.+|+|+.+|++.++.+ ....+.+-|
T Consensus 26 ~Dv~l~v~~~~~~~Hk~iL~~~S-~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~-~~~~ll~~A 103 (145)
T 4eoz_A 26 TDCCLCVAGQEFQAHKAILAARS-PVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDK-MADDLLAAA 103 (145)
T ss_dssp CCEEEEETTEEEEECHHHHHHHC-HHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHHHSCCTTGGG-THHHHHHHH
T ss_pred cceEEEECCEEEEeehHHHHHcC-HHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhccCccCCcHH-HHHHHHHHH
Confidence 35888999999999999997632 123222111111122356666 678999999999999999875443 456788889
Q ss_pred hhcCCCCc
Q psy13459 120 AFFGILPD 127 (542)
Q Consensus 120 ~f~~l~~~ 127 (542)
++|+++.+
T Consensus 104 ~~~~~~~l 111 (145)
T 4eoz_A 104 DKYALERL 111 (145)
T ss_dssp HHTTCHHH
T ss_pred HHhCHHHH
Confidence 99999665
No 51
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=93.64 E-value=0.028 Score=50.52 Aligned_cols=86 Identities=12% Similarity=0.202 Sum_probs=61.6
Q ss_pred ceEEEEeCCeEEEeeHHHHhcCCCCccccCCCCCccCCCCceEEE-ecCCcchHHhhcccccCcccCCCCCCHHHHHHHH
Q psy13459 41 EKLLINVSGRRFETWRNTLEKYPDSLLGSNEREFFYDEDSKEYFF-DRDPDIFRHILNYYRTGKLHYPKHECLTSYDEEL 119 (542)
Q Consensus 41 ~~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~~~~~~~~~~~f~-DRd~~~F~~Il~~~r~g~l~~p~~~~~~~~~~E~ 119 (542)
.-|+|.|||+.|...+..|...- ..+..+..........+++-+ |-+|+.|+.+|+|+.+|++.++. .....+.+-|
T Consensus 35 ~Dv~l~v~~~~~~~Hk~iL~~~S-~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~~~~-~~~~~ll~~A 112 (172)
T 3htm_A 35 TDCCLCVAGQEFQAHKAILAARS-PVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLD-KMADDLLAAA 112 (172)
T ss_dssp CCEEEEETTEEEEECHHHHHHHC-HHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHHHHHSCCTTGG-GTHHHHHHHH
T ss_pred cceEEEECCEEEEeeHHHHHHcC-HHHHHHHccCccccCCCeEEecCCCHHHHHHHHHHHhCCCCCCcH-HHHHHHHHHH
Confidence 35889999999999999997642 223322211122233466766 67999999999999999987544 3466788889
Q ss_pred hhcCCCCcc
Q psy13459 120 AFFGILPDV 128 (542)
Q Consensus 120 ~f~~l~~~~ 128 (542)
++|+++.+.
T Consensus 113 ~~~~~~~l~ 121 (172)
T 3htm_A 113 DKYALERLK 121 (172)
T ss_dssp HHTTCHHHH
T ss_pred HHhCcHHHH
Confidence 999997653
No 52
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=93.22 E-value=0.03 Score=47.45 Aligned_cols=79 Identities=22% Similarity=0.240 Sum_probs=58.4
Q ss_pred eEEEEeCCeEEEeeHHHHhcCCCCccccCCCCCccCCCCceEEE-ecCCcchHHhhcccccCcccCCCCCCHHHHHHHHh
Q psy13459 42 KLLINVSGRRFETWRNTLEKYPDSLLGSNEREFFYDEDSKEYFF-DRDPDIFRHILNYYRTGKLHYPKHECLTSYDEELA 120 (542)
Q Consensus 42 ~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~~~~~~~~~~~f~-DRd~~~F~~Il~~~r~g~l~~p~~~~~~~~~~E~~ 120 (542)
-|+|.|||+.|...+..|...- ..+..+.. .+.+++-+ |=+|+.|+.+|+|+.||++.++. .....+..=|+
T Consensus 30 Dv~l~v~~~~f~aHk~vLaa~S-~yF~~~f~-----~~~~~i~l~~~~~~~f~~ll~~~Ytg~~~~~~-~~~~~ll~~A~ 102 (121)
T 1buo_A 30 DVVIMVDSQEFHAHRTVLACTS-KMFEILFH-----RNSQHYTLDFLSPKTFQQILEYAYTATLQAKA-EDLDDLLYAAE 102 (121)
T ss_dssp CEEEEESSCEEEECHHHHHHHC-HHHHHHTT-----SCCSEEEECSSCHHHHHHHHHHHHHSCCCCCG-GGHHHHHHHHH
T ss_pred CEEEEECCEEEehhHHHHhhcC-HHHHHHHc-----CCCcEEEeCCCCHHHHHHHHHhhcCCCcCCCH-HHHHHHHHHHH
Confidence 5888999999999999997632 12222211 12445555 46899999999999999998654 34677888899
Q ss_pred hcCCCCc
Q psy13459 121 FFGILPD 127 (542)
Q Consensus 121 f~~l~~~ 127 (542)
+|+++.+
T Consensus 103 ~~~i~~L 109 (121)
T 1buo_A 103 ILEIEYL 109 (121)
T ss_dssp HHTCHHH
T ss_pred HHCCHHH
Confidence 9999665
No 53
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=93.06 E-value=0.051 Score=45.73 Aligned_cols=79 Identities=18% Similarity=0.223 Sum_probs=57.1
Q ss_pred eEEEEeCCeEEEeeHHHHhcCCCCccccCCCCCccCCCCceEEE-ecCCcchHHhhcccccCcccCCCCCCHHHHHHHHh
Q psy13459 42 KLLINVSGRRFETWRNTLEKYPDSLLGSNEREFFYDEDSKEYFF-DRDPDIFRHILNYYRTGKLHYPKHECLTSYDEELA 120 (542)
Q Consensus 42 ~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~~~~~~~~~~~f~-DRd~~~F~~Il~~~r~g~l~~p~~~~~~~~~~E~~ 120 (542)
-|+|.|||+.|...+..|...- ..+..+... ..+++-+ |=+|+.|+.+|+|+.||++.-........+.+=|+
T Consensus 33 Dv~l~v~~~~f~aHk~vLaa~S-~~F~~~f~~-----~~~~i~l~~~~~~~f~~~l~~~Ytg~~~~~~~~~~~~ll~~A~ 106 (116)
T 3fkc_A 33 DVTVIVEDRKFRAHKNILSASS-TYFHQLFSV-----AGQVVELSFIRAEIFAEILNYIYSSKIVRVRSDLLDELIKSGQ 106 (116)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHTTS-----CCSEEEECSSCHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHH
T ss_pred eEEEEECCEEEehhHHHHHHcC-HHHHHHHcC-----CCCEEEeCCCCHHHHHHHHHhhcCCCcCCCCHHHHHHHHHHHH
Confidence 5788899999999999997642 123222211 1456666 56899999999999999983233344677888899
Q ss_pred hcCCCC
Q psy13459 121 FFGILP 126 (542)
Q Consensus 121 f~~l~~ 126 (542)
+|+++.
T Consensus 107 ~l~i~~ 112 (116)
T 3fkc_A 107 LLGVKF 112 (116)
T ss_dssp HHTCHH
T ss_pred HhCccc
Confidence 999854
No 54
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=93.03 E-value=0.013 Score=49.55 Aligned_cols=80 Identities=13% Similarity=0.157 Sum_probs=56.4
Q ss_pred eEEEEeCCeEEEeeHHHHhcCCCCccccCCCCCccCCCCceEEEec-CCcchHHhhcccccCcccCCCCCCHHHHHHHHh
Q psy13459 42 KLLINVSGRRFETWRNTLEKYPDSLLGSNEREFFYDEDSKEYFFDR-DPDIFRHILNYYRTGKLHYPKHECLTSYDEELA 120 (542)
Q Consensus 42 ~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~~~~~~~~~~~f~DR-d~~~F~~Il~~~r~g~l~~p~~~~~~~~~~E~~ 120 (542)
-|+|.|||+.|...+..|...- ..+..+... ..+++-++- +|+.|+.+|+|+.||++.++.+ ....+..=|+
T Consensus 29 Dv~l~v~~~~~~aHk~vLaa~S-~yF~~~f~~-----~~~~i~l~~~~~~~f~~ll~~~Ytg~~~i~~~-~~~~ll~~A~ 101 (119)
T 2q81_A 29 DCTFVVDGVHFKAHKAVLAACS-EYFKMLFVD-----QKDVVHLDISNAAGLGQVLEFMYTAKLSLSPE-NVDDVLAVAT 101 (119)
T ss_dssp CEEEEETTEEEEECHHHHHHHC-HHHHHHHHH-----CCSGGGGGGCCHHHHHHHHHHHHHSCCCCCTT-THHHHHHHHH
T ss_pred ceEEEECCEEEehhHHHHHHcC-HHHHHHHcC-----CCCEEEeCCCCHHHHHHHHHHHcCCCCccCHH-HHHHHHHHHH
Confidence 5888999999999999998632 122222100 112222322 6889999999999999987654 4678888899
Q ss_pred hcCCCCcc
Q psy13459 121 FFGILPDV 128 (542)
Q Consensus 121 f~~l~~~~ 128 (542)
+|+++.+.
T Consensus 102 ~l~i~~L~ 109 (119)
T 2q81_A 102 FLQMQDII 109 (119)
T ss_dssp HTTCHHHH
T ss_pred HhCCHHHH
Confidence 99996653
No 55
>3kg2_A Glutamate receptor 2; ION channel, membrane protein, cell membrane, glycoprotein, transport, membrane, postsynaptic cell membrane, editing; HET: ZK1 NAG BMA; 3.60A {Rattus norvegicus}
Probab=93.01 E-value=0.094 Score=59.14 Aligned_cols=55 Identities=22% Similarity=0.519 Sum_probs=45.1
Q ss_pred ccchhhhHHHhhhhccccCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13459 356 SIPAAFWYTIVTMTTLGYGDMVPETIAGKIVGGVCSLSGVLVIALPVPVIVSNFSR 411 (542)
Q Consensus 356 s~~~a~y~a~vTltTVGYGDi~p~t~~~~i~~~~~~i~g~~~~al~i~~i~~~f~~ 411 (542)
++.+++|+++.++++.| ++..|.+..+|++.++|+++++++.+...+.+.+.+..
T Consensus 563 ~~~~~~~~~~~~l~~~g-~~~~p~~~~~R~~~~~w~~~~lil~~~Yta~L~s~Lt~ 617 (823)
T 3kg2_A 563 GIFNSLWFSLGAFMQQG-ADISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 617 (823)
T ss_dssp HHHHHHHHTTTTSCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcC-CCcCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 46689999999999999 78999999999999999999999999999999988875
No 56
>4hpf_A Potassium channel subfamily U member 1; PH-gated, membrane protein, transport Pro; 3.40A {Homo sapiens}
Probab=92.08 E-value=0.059 Score=60.24 Aligned_cols=53 Identities=13% Similarity=0.089 Sum_probs=48.1
Q ss_pred cCccchHHHHHHHHHHhcccceeecccchhhHHHHHHh--hcCcccccccCCCCh
Q psy13459 472 CGQRYQKARLARIRIAKASSGAAFVSKKKAAEARMAAQ--ESGLEIDENYREEDI 524 (542)
Q Consensus 472 ~Gs~~~~~~l~Rvr~~~a~~~~~l~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~ 524 (542)
.|+++.+.+|.|+++++|++|+++++++..+++++|++ +++++++++.++.++
T Consensus 63 ~Gs~~~~~dL~ra~i~~A~av~Il~~~~~~d~~~~D~~~il~~laik~~~p~~~i 117 (722)
T 4hpf_A 63 SGSAMKWEDLRRVAVESAEACLIIANPLCSDSHAEDISNIMRVLSIKNYDSTTRI 117 (722)
T ss_dssp BCCSSCHHHHHHHTGGGSSEEEECCCSSCSCHHHHHHHHHHHHHHHHHHCTTCCE
T ss_pred EcCCCCHHHHHhcCcccCCEEEEeCCCccCCchhhHHHHHHHHHHHHHhCCCCCE
Confidence 49999999999999999999999999999999888887 788888888887776
No 57
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=91.90 E-value=0.12 Score=49.72 Aligned_cols=86 Identities=10% Similarity=0.114 Sum_probs=59.5
Q ss_pred ceEEEEeCCeEEEeeHHHHhcCCCCccccCCCCCcc--CCCCceEEE-ecCCcchHHhhcccccCcccCCCCCCHHHHHH
Q psy13459 41 EKLLINVSGRRFETWRNTLEKYPDSLLGSNEREFFY--DEDSKEYFF-DRDPDIFRHILNYYRTGKLHYPKHECLTSYDE 117 (542)
Q Consensus 41 ~~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~~~~--~~~~~~~f~-DRd~~~F~~Il~~~r~g~l~~p~~~~~~~~~~ 117 (542)
.-|+|.|||+.|...+..|...- .++..+.....- .....++-+ |=+|+.|+.+|+|+.||++.++. .....+..
T Consensus 32 ~Dv~l~v~~~~f~~Hr~vLaa~S-~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Yt~~~~i~~-~~v~~ll~ 109 (256)
T 3hve_A 32 CDAHLVLDGEEIPVQKNILAAAS-PYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQIRLNE-DTIQDVVQ 109 (256)
T ss_dssp CCEEEEETTEEEEECHHHHHTTC-HHHHHTC-----------CEEECSSCCHHHHHHHHHHHHHSCCCCC--CCHHHHHH
T ss_pred cceEEEECCEEEechHHHHHHcC-HHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhccCCCCcccH-hHHHHHHH
Confidence 35889999999999999998742 233333221111 123456666 56899999999999999997654 45778888
Q ss_pred HHhhcCCCCcc
Q psy13459 118 ELAFFGILPDV 128 (542)
Q Consensus 118 E~~f~~l~~~~ 128 (542)
-|++|+++...
T Consensus 110 ~A~~l~i~~l~ 120 (256)
T 3hve_A 110 AADLLLLTDLK 120 (256)
T ss_dssp HHHHHTCHHHH
T ss_pred HHHHHChHHHH
Confidence 99999997653
No 58
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=91.43 E-value=0.85 Score=48.65 Aligned_cols=31 Identities=10% Similarity=0.045 Sum_probs=18.1
Q ss_pred CCCHHHHHHHHhhcCC-CCccc-cccccchhhh
Q psy13459 109 HECLTSYDEELAFFGI-LPDVI-GDCCYEDYRD 139 (542)
Q Consensus 109 ~~~~~~~~~E~~f~~l-~~~~~-~~cC~e~~~~ 139 (542)
|-....|..=+.||.= ..+.. ...|.+.+.+
T Consensus 98 DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~~ 130 (514)
T 2r9r_B 98 DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSE 130 (514)
T ss_dssp CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHHH
T ss_pred cCChHHHHHHHHHHhcCCccccCCcccHHHHHH
Confidence 3456778888888875 33332 3346555443
No 59
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=91.32 E-value=0.12 Score=50.37 Aligned_cols=85 Identities=16% Similarity=0.241 Sum_probs=58.8
Q ss_pred eEEEEeC---CeEEEeeHHHHhcCCCCccccCCCCCccCCCCceEEE-------ecCCcchHHhhcccccCcccCCCCCC
Q psy13459 42 KLLINVS---GRRFETWRNTLEKYPDSLLGSNEREFFYDEDSKEYFF-------DRDPDIFRHILNYYRTGKLHYPKHEC 111 (542)
Q Consensus 42 ~v~lNVg---G~~f~t~~~tl~~~p~t~l~~~~~~~~~~~~~~~~f~-------DRd~~~F~~Il~~~r~g~l~~p~~~~ 111 (542)
-|+|.|| |+.|...+..|...- ..+..+.....-....+++-+ |=+|+.|+.+|+|+.||++.++.+ .
T Consensus 34 Dv~l~v~~~~~~~f~~Hr~vLaa~S-~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~~-~ 111 (279)
T 3i3n_A 34 DITLCFGGAGGREFRAHRSVLAAAT-EYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVSTG-S 111 (279)
T ss_dssp CEEEECC----CEEEECHHHHHHHC-TTSGGGCCC--------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEETT-T
T ss_pred CeEEEEcCCCCeEEehHHHHHHHcC-HHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccCHH-H
Confidence 4889998 999999999998642 233333222222234567777 678999999999999999987553 4
Q ss_pred HHHHHHHHhhcCCCCcc
Q psy13459 112 LTSYDEELAFFGILPDV 128 (542)
Q Consensus 112 ~~~~~~E~~f~~l~~~~ 128 (542)
...+..-|++|+++...
T Consensus 112 v~~ll~~A~~l~i~~L~ 128 (279)
T 3i3n_A 112 VHEVLELADRFLLIRLK 128 (279)
T ss_dssp HHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHCcHHHH
Confidence 67788889999997653
No 60
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=88.63 E-value=0.16 Score=50.47 Aligned_cols=86 Identities=12% Similarity=0.202 Sum_probs=60.9
Q ss_pred ceEEEEeCCeEEEeeHHHHhcCCCCccccCCCCCccCCCCceEEE-ecCCcchHHhhcccccCcccCCCCCCHHHHHHHH
Q psy13459 41 EKLLINVSGRRFETWRNTLEKYPDSLLGSNEREFFYDEDSKEYFF-DRDPDIFRHILNYYRTGKLHYPKHECLTSYDEEL 119 (542)
Q Consensus 41 ~~v~lNVgG~~f~t~~~tl~~~p~t~l~~~~~~~~~~~~~~~~f~-DRd~~~F~~Il~~~r~g~l~~p~~~~~~~~~~E~ 119 (542)
.-|+|.|||+.|...+..|...- ..+..+.....-....+++-+ |=+|+.|+.+|+|+.+|++..+. .....++.=|
T Consensus 175 ~Dv~l~v~~~~f~~Hk~vLaa~S-~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~-~~~~~ll~~A 252 (312)
T 3hqi_A 175 TDCCLCVAGQEFQAHKAILAARS-PVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLD-KMADDLLAAA 252 (312)
T ss_dssp CCEEEEETTEEEEECHHHHHHHC-HHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHHHSCCTTHH-HHHHHHHHHH
T ss_pred CceEEEECCEEEeHHHHHHHHcC-HHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhcCCCCCChH-HHHHHHHHHH
Confidence 46899999999999999997642 223332222222234567777 67999999999999999986543 3366788899
Q ss_pred hhcCCCCcc
Q psy13459 120 AFFGILPDV 128 (542)
Q Consensus 120 ~f~~l~~~~ 128 (542)
++|+++.+.
T Consensus 253 ~~~~~~~l~ 261 (312)
T 3hqi_A 253 DKYALERLK 261 (312)
T ss_dssp HHTTCHHHH
T ss_pred HHhCHHHHH
Confidence 999997653
No 61
>2lcm_A Voltage-dependent N-type calcium channel subunit; voltage sensor peptide, membrane protein; NMR {Homo sapiens}
Probab=88.47 E-value=0.39 Score=29.57 Aligned_cols=25 Identities=32% Similarity=0.480 Sum_probs=20.2
Q ss_pred hhHHHHHHHHHHHHHHhhhhccchh
Q psy13459 287 GAFVTLRVFRVFRIFKFSRHSQGLR 311 (542)
Q Consensus 287 ~~l~~lR~lRllRilkl~r~~~~l~ 311 (542)
+.++.+|.+|++|.+|.+..+++++
T Consensus 4 ~~l~~lrtlR~LRpLr~isr~~gmk 28 (28)
T 2lcm_A 4 NTIKSLRVLRVLRPLKTIKRLPKLK 28 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred chhhHHHHHHHhcchHHHhhcccCC
Confidence 4577889999999999888877763
No 62
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A*
Probab=88.09 E-value=0.46 Score=46.43 Aligned_cols=31 Identities=23% Similarity=0.359 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHhhhhccch-hhhhhhhhc
Q psy13459 289 FVTLRVFRVFRIFKFSRHSQGL-RILGYTLKS 319 (542)
Q Consensus 289 l~~lR~lRllRilkl~r~~~~l-~~l~~~l~~ 319 (542)
++++|++|++|++|..+..+.+ +.+..++..
T Consensus 116 lr~~RilR~lrl~~~~~~l~~l~~~l~~~~~~ 147 (285)
T 3rvy_A 116 LRVLRVLRLFRLVTAVPQMRKIVSALISVIPG 147 (285)
T ss_dssp HHHHGGGGGGHHHHSSTTHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666666666666666655554 334444443
No 63
>3mt5_A Potassium large conductance calcium-activated CHA subfamily M, alpha member 1; potassium channel, membrane protein, transport protein; 3.00A {Homo sapiens} PDB: 3u6n_A
Probab=82.12 E-value=0.51 Score=52.11 Aligned_cols=53 Identities=21% Similarity=0.161 Sum_probs=46.4
Q ss_pred cCccchHHHHHHHHHHhcccceeecccchhhHHHHHHh--hcCcccccccCCCCh
Q psy13459 472 CGQRYQKARLARIRIAKASSGAAFVSKKKAAEARMAAQ--ESGLEIDENYREEDI 524 (542)
Q Consensus 472 ~Gs~~~~~~l~Rvr~~~a~~~~~l~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~ 524 (542)
.|+++.+.+|.|+.+++|+++++++++.+.++.++|++ ..+.++++..++.++
T Consensus 63 ~Gdat~~edL~RA~I~~A~aVIIlad~~~~d~~~sDa~nIl~vLsar~lnP~i~I 117 (726)
T 3mt5_A 63 QGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRI 117 (726)
T ss_dssp CCCTTSHHHHHHTTGGGCSEEEEECCTTCSCHHHHHHHHHHHHHHHHHHCTTSCE
T ss_pred EeCCCCHHHHHhcChhhcCEEEEEcCccccCCcccHHHHHHHHHHHHHhCCCCCE
Confidence 59999999999999999999999999988888887776 677888877777776
No 64
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114}
Probab=80.88 E-value=1.9 Score=40.40 Aligned_cols=30 Identities=20% Similarity=0.382 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHhhhhccch-hhhhhhhhc
Q psy13459 290 VTLRVFRVFRIFKFSRHSQGL-RILGYTLKS 319 (542)
Q Consensus 290 ~~lR~lRllRilkl~r~~~~l-~~l~~~l~~ 319 (542)
|.+|++|++|+.|..+..+.+ +.+..++..
T Consensus 102 r~~RilR~lrl~~~~~~l~~l~~~l~~s~~~ 132 (229)
T 4dxw_A 102 RLLRIFRVLRLISVIPELKQIIEAILESVRR 132 (229)
T ss_dssp TTHHHHHHTTHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 334445555555444444443 334444443
No 65
>2a9h_A Voltage-gated potassium channel; potassium channel, KCSA, structure, membrane protein, metal transport; HET: PCA; NMR {Streptomyces lividans} SCOP: f.14.1.1
Probab=79.49 E-value=4.9 Score=35.39 Aligned_cols=20 Identities=0% Similarity=-0.134 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHhhhhc
Q psy13459 288 AFVTLRVFRVFRIFKFSRHS 307 (542)
Q Consensus 288 ~l~~lR~lRllRilkl~r~~ 307 (542)
++.++.++|++|++|+.|..
T Consensus 20 li~~lp~lr~lRllRi~ril 39 (155)
T 2a9h_A 20 LIKHMPPMLSGLLARLVKLL 39 (155)
T ss_dssp --------------------
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34556666777777776655
No 66
>3naf_A Calcium-activated potassium channel subunit alpha; ION channel, gating ring, rossman fold, transport, ION trans; 3.10A {Homo sapiens}
Probab=73.98 E-value=0.87 Score=50.82 Aligned_cols=53 Identities=21% Similarity=0.161 Sum_probs=45.4
Q ss_pred cCccchHHHHHHHHHHhcccceeecccchhhHHHHHHh--hcCcccccccCCCCh
Q psy13459 472 CGQRYQKARLARIRIAKASSGAAFVSKKKAAEARMAAQ--ESGLEIDENYREEDI 524 (542)
Q Consensus 472 ~Gs~~~~~~l~Rvr~~~a~~~~~l~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~ 524 (542)
.|+++.+.+|.|+.+++|+++++++++...+++++|++ ..+.++++..++.++
T Consensus 113 ~Gdat~~e~L~RAgI~~A~aVIIla~~~~~d~~~~Da~nIl~vLsar~lnP~i~I 167 (798)
T 3naf_A 113 QGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRI 167 (798)
T ss_dssp ECCSSSHHHHHHTTGGGCSEEEECCCTTCSCHHHHHHHHHHHHHHHHHHSTTCCE
T ss_pred EcCCCCHHHHHhcCHhhCCEEEEECCccccCCccchHHHHHHHHHHHHHCCCCCE
Confidence 69999999999999999999999999988888887776 667777777677666
No 67
>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A
Probab=70.71 E-value=47 Score=30.34 Aligned_cols=20 Identities=15% Similarity=0.248 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHhhhhccchh
Q psy13459 292 LRVFRVFRIFKFSRHSQGLR 311 (542)
Q Consensus 292 lR~lRllRilkl~r~~~~l~ 311 (542)
+|++|++|++|+.|..+.++
T Consensus 99 lr~lRllRllR~~r~~~~~~ 118 (223)
T 1orq_C 99 FRLVRLLRFLRILLIISRGS 118 (223)
T ss_dssp HHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 56666666666665554443
No 68
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Probab=69.51 E-value=13 Score=36.95 Aligned_cols=19 Identities=0% Similarity=-0.018 Sum_probs=10.8
Q ss_pred HHHHHHHHHHhhhhccchh
Q psy13459 293 RVFRVFRIFKFSRHSQGLR 311 (542)
Q Consensus 293 R~lRllRilkl~r~~~~l~ 311 (542)
|.+|++|++|+.|..+..+
T Consensus 95 ~~~r~lr~~R~lrl~r~~~ 113 (355)
T 3beh_A 95 PDWSLYCAVWLLKPLRDST 113 (355)
T ss_dssp GGGGGGGGGGGSHHHHTCS
T ss_pred hhHHHHHHHHHHHHHHHHH
Confidence 4456666666666555443
No 69
>1qg9_A Protein (sodium channel protein, brain II alpha subunit); transmembrane sodium channel, structure, transmembrane channel; NMR {Synthetic} SCOP: j.35.1.1
Probab=64.73 E-value=2.9 Score=25.12 Aligned_cols=20 Identities=25% Similarity=0.423 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHhhCc
Q psy13459 233 DTACVMIFTAEYLLRLFAAP 252 (542)
Q Consensus 233 e~v~~~iF~~E~~lr~~~a~ 252 (542)
|++++++|++|+++|+.+-+
T Consensus 3 e~~F~~IYtfE~liKi~ArG 22 (26)
T 1qg9_A 3 EYTFTGIYTFESLIKILARX 22 (26)
T ss_dssp SCCHHHHHHHHHHHHHHTC-
T ss_pred eEEeeHHHHHHHHHHHHHhh
Confidence 56789999999999998544
No 70
>3pjz_A Potassium uptake protein TRKH; structural genomics, PSI-2, protein structure initiative, NE consortium on membrane protein structure; 3.51A {Vibrio parahaemolyticus}
Probab=53.64 E-value=26 Score=36.86 Aligned_cols=44 Identities=25% Similarity=0.216 Sum_probs=32.4
Q ss_pred ccchhhhHHHhhhhcccc--CCCC----cccchhhHHHHHHHHHH-HHHHH
Q psy13459 356 SIPAAFWYTIVTMTTLGY--GDMV----PETIAGKIVGGVCSLSG-VLVIA 399 (542)
Q Consensus 356 s~~~a~y~a~vTltTVGY--GDi~----p~t~~~~i~~~~~~i~g-~~~~a 399 (542)
++.+|+.=++.+++|||- |.+- .-++.+|++.++.|++| +-+++
T Consensus 423 ~~~~a~~~v~Sal~nvG~s~G~vg~~~~~L~~~~K~vl~~~M~~GRLei~t 473 (494)
T 3pjz_A 423 DELSAFSAVAATLNNLGPGLGEVALHFGDVNDKAKWVLIVSMLFGRLEIFT 473 (494)
T ss_dssp CHHHHHHHHHHHTTTCCSCCSSSCCCCSSSCHHHHHHHHHHHHHHHTTTHH
T ss_pred cHHHHHHHHHHHHcCCCCcccccCCCcccCCHHHHHHHHHHHHHHHhHHHH
Confidence 567888888889999885 4322 34668999999999988 44443
No 71
>1ors_C Potassium channel; voltage-dependent, voltage sensor, KVAP, FAB complex, membrane protein; 1.90A {Aeropyrum pernix} SCOP: f.14.1.1
Probab=39.04 E-value=9.8 Score=32.32 Aligned_cols=20 Identities=30% Similarity=0.481 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHhhhhccc
Q psy13459 290 VTLRVFRVFRIFKFSRHSQG 309 (542)
Q Consensus 290 ~~lR~lRllRilkl~r~~~~ 309 (542)
+.+|++|++|++|+.|..+.
T Consensus 92 ~~lr~lRllRv~Rvlkl~r~ 111 (132)
T 1ors_C 92 AGLGLFRLVRLLRFLRILLI 111 (132)
T ss_dssp HHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555554433
No 72
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=37.37 E-value=1.4e+02 Score=22.86 Aligned_cols=22 Identities=18% Similarity=0.283 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy13459 390 CSLSGVLVIALPVPVIVSNFSR 411 (542)
Q Consensus 390 ~~i~g~~~~al~i~~i~~~f~~ 411 (542)
-+++|++++++.+-.+.-.+..
T Consensus 16 gvi~gilliGllllliwk~~~~ 37 (79)
T 2knc_B 16 SVMGAILLIGLAALLIWKLLIT 37 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555444444433
No 73
>2kyh_A KVAP, voltage-gated potassium channel; ION channel, membrane protein; NMR {Aeropyrum pernix}
Probab=37.19 E-value=9.3 Score=33.26 Aligned_cols=10 Identities=40% Similarity=1.022 Sum_probs=3.7
Q ss_pred HHHHHHHHhh
Q psy13459 295 FRVFRIFKFS 304 (542)
Q Consensus 295 lRllRilkl~ 304 (542)
+|++|++|+.
T Consensus 112 lRllRv~Rll 121 (147)
T 2kyh_A 112 FRLVRLLRFL 121 (147)
T ss_dssp CHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
Done!