BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13460
(281 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P36362|CHIT_MANSE Endochitinase OS=Manduca sexta PE=2 SV=1
Length = 554
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 86 FPDEVKCDVFWNCWNGESSRYQCSPGLAYDREARVCMW 123
PD+ CD +W C NGE+ ++ C G ++ E VC W
Sbjct: 505 IPDKKHCDKYWRCVNGEAMQFSCQHGTVFNVELNVCDW 542
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 9 CPDDFGFYPHHISCDKYWKCDGREAELKTCGNGLAFD 45
C D + P CDKYW+C EA +C +G F+
Sbjct: 498 CNSDQDYIPDKKHCDKYWRCVNGEAMQFSCQHGTVFN 534
>sp|O17450|PE48_CHRBE Peritrophin-48 OS=Chrysomya bezziana PE=2 SV=1
Length = 379
Score = 37.7 bits (86), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 69/183 (37%), Gaps = 25/183 (13%)
Query: 15 FYPHHISCDKYWKCDGREAELKTCGNGLAFDDTDPKYLKEN---CDYLHNVDCGSRSQLE 71
++ + +C + KC G E + TC NG FD T + N C + N S +
Sbjct: 162 YFGDNKNCSTWHKCSGMEEKKGTCPNGDNFDPTYASCVPSNMPACSRIQNPP--STGVVS 219
Query: 72 PPVSTPKCPRLYGIFPDEVKCDVFWNCWNGESSR------YQCSPGLAYDREARVCMWAD 125
P ST C L + D C V++ C N S Y CS G +D ++ C +
Sbjct: 220 GPPSTSPC-SLGTVVGDLTSCSVYYKCENATRSNSTIWNTYTCS-GQFFDVISKQCTSTN 277
Query: 126 QVPECKIEEVANGFNCPAAGEIAAGGSFSRHAHPDDCRKYYIC---LEGTAREYGCPIGT 182
Q K G N + G + +A C +Y+ C LE + C G
Sbjct: 278 QARTLK------GCN---RCQFTTGSMYWVNAVDPQCSEYFTCSNGLETKSTASTCGAGN 328
Query: 183 VFK 185
F
Sbjct: 329 FFN 331
>sp|Q95M17|CHIA_BOVIN Acidic mammalian chitinase OS=Bos taurus GN=CHIA PE=1 SV=1
Length = 472
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 84 GIFPDEVKCDVFWNCWNGESSRYQCSPGLAYDREARVCMWA 124
G++P + FWNC NG + + C GL +D C WA
Sbjct: 432 GLYPVADNRNAFWNCVNGITYKQNCLTGLVFDTSCHCCNWA 472
>sp|Q16AA1|YIDC_ROSDO Membrane protein insertase YidC OS=Roseobacter denitrificans
(strain ATCC 33942 / OCh 114) GN=yidC PE=3 SV=1
Length = 606
Score = 35.8 bits (81), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 19/116 (16%)
Query: 93 DVFWNCWNGESSRYQCSPGLAYDREA-----RVCMWADQVPECKIEEVANGFNCPAAGEI 147
D W +G+ L +D A R+ D + VAN + P +
Sbjct: 150 DTEWQVIDGDILSVDAPVTLQWDNGAGLSFTRIIEIDDNYMFQITQSVANTSDAPVT--V 207
Query: 148 AAGGSFSRHAHPDDCRKYYICLEGTAREYGCPIGTVFKIGDGEGT-GNCEDPEEVP 202
A G +RH PDD + ++I EG V + DGE T N +D E P
Sbjct: 208 APYGILARHGEPDDLKNFFILHEG-----------VVAMADGELTETNWDDIPEFP 252
>sp|Q9BZP6|CHIA_HUMAN Acidic mammalian chitinase OS=Homo sapiens GN=CHIA PE=1 SV=1
Length = 476
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 81 RLYGIFPDEVKCDVFWNCWNGESSRYQCSPGLAYDREARVCMWA 124
R G++P + FW+C NG + + C GL +D C WA
Sbjct: 433 RANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNWA 476
>sp|Q9W5U2|CHIT3_DROME Probable chitinase 3 OS=Drosophila melanogaster GN=Cht3 PE=2 SV=2
Length = 2286
Score = 35.0 bits (79), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 16/25 (64%)
Query: 157 AHPDDCRKYYICLEGTAREYGCPIG 181
AH DC KYYIC GT E CP+G
Sbjct: 1836 AHEWDCTKYYICEHGTYVERSCPLG 1860
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 4/107 (3%)
Query: 92 CDVFWNCWNGESSRYQCSPGLAYDREARVCMWADQVPECKIEEVANGFNCPAAGEIAAGG 151
C ++ C N +C L +D ++C W + V ++ +A E
Sbjct: 811 CRKYYICVNKALVPSECGGDLHWDGIKKLCDWPENVQCVTSKKYLKIIKSSSANEEDPCK 870
Query: 152 SFSRHAHPDDCRKYYICLEGTAREYGCPIGTVFKIGDGEGTGNCEDP 198
R +P +C KY CL + CP G + E GNC+ P
Sbjct: 871 GEKRVPYPGNCSKYLFCLWNRLQASDCPPGLHYN----ERIGNCDWP 913
>sp|Q6RY07|CHIA_RAT Acidic mammalian chitinase OS=Rattus norvegicus GN=Chia PE=2 SV=1
Length = 473
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 84 GIFPDEVKCDVFWNCWNGESSRYQCSPGLAYDREARVCMW 123
G++P + FW+C NG + + C GL +D C W
Sbjct: 433 GLYPVADDRNAFWHCINGITYQQHCQAGLVFDTSCNCCNW 472
>sp|Q17802|CPG1_CAEEL Chondroitin proteoglycan 1 OS=Caenorhabditis elegans GN=cpg-1 PE=1
SV=1
Length = 584
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 95 FWNCWNGESSRYQCSPGLAYDREARVCMWADQVPEC 130
+ NC NG+ + + C GL + E C ADQ+ EC
Sbjct: 541 YKNCVNGQEAIFICENGLFFSPEQARCAPADQIAEC 576
>sp|Q91XA9|CHIA_MOUSE Acidic mammalian chitinase OS=Mus musculus GN=Chia PE=1 SV=2
Length = 473
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 84 GIFPDEVKCDVFWNCWNGESSRYQCSPGLAYDREARVCMW 123
G++P + FW C NG + + C GL +D C W
Sbjct: 433 GLYPVADDRNAFWQCINGITYQQHCQAGLVFDTSCNCCNW 472
>sp|Q6C882|STU1_YARLI Protein STU1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=STU1 PE=3 SV=2
Length = 1597
Score = 32.3 bits (72), Expect = 3.5, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 217 KSELLAGLPGGNGASSNPRSKQPAPQQEAAPSQPLKSAKSRP-QAPSPNRP-QQNIPQRL 274
K +L GLPGGN +S+ K AP+ ++ KS S+P Q P+ P +N P
Sbjct: 210 KKSILNGLPGGNSSSAVSDPKTTAPRSLSSQ----KSVASKPAQQPNSQEPGNENAPSSS 265
Query: 275 L 275
L
Sbjct: 266 L 266
>sp|Q23658|CAPS_CAEEL Calcium-dependent secretion activator OS=Caenorhabditis elegans
GN=unc-31 PE=2 SV=6
Length = 1378
Score = 32.3 bits (72), Expect = 3.9, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 7/64 (10%)
Query: 210 LDLKSIRKSELLAGLPGGNGASSNPRSKQPAPQQEAAPSQPLKSAKSRPQAPSPNRPQQN 269
L + ++K LL+G + PRS PAP + + LK S Q + Q
Sbjct: 21 LPIAQVKKRSLLSG-------AMTPRSSSPAPSDSVSQTNSLKRNNSSSQGRRKDSVQSQ 73
Query: 270 IPQR 273
P R
Sbjct: 74 TPAR 77
>sp|Q60PC0|CAPS_CAEBR Calcium-dependent secretion activator OS=Caenorhabditis briggsae
GN=unc-31 PE=3 SV=3
Length = 1354
Score = 32.0 bits (71), Expect = 5.5, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 7/64 (10%)
Query: 210 LDLKSIRKSELLAGLPGGNGASSNPRSKQPAPQQEAAPSQPLKSAKSRPQAPSPNRPQQN 269
L + ++K LL+G + PRS PAP + + LK S QA +
Sbjct: 22 LPIAQVKKRSLLSG-------AMTPRSSSPAPSDSVSQTNSLKRNNSSSQARRKDSVHSQ 74
Query: 270 IPQR 273
P R
Sbjct: 75 TPAR 78
>sp|Q47IN0|SYL_DECAR Leucine--tRNA ligase OS=Dechloromonas aromatica (strain RCB)
GN=leuS PE=3 SV=2
Length = 870
Score = 31.6 bits (70), Expect = 6.2, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 40/109 (36%), Gaps = 13/109 (11%)
Query: 20 ISCDKYWKCDGREAELKTCGNGLAFDDTDPKYLKENCDYLHNVDCGSRSQLEPPVSTPKC 79
IS +YW C KTCG+ DD P L EN + GS P +C
Sbjct: 427 ISRQRYWGCPIPIIHCKTCGDVPVPDDQLPVVLPENVEI---TGAGSPLAKMPEFYECQC 483
Query: 80 PRLYGIFPDEVKC-DVFWNCWNGESS----RYQCSPGLAYDREARVCMW 123
P+ G E D F+ ESS RY C + RV W
Sbjct: 484 PKCGGDARRETDTMDTFF-----ESSWYFLRYACPDNTTAMVDERVAYW 527
>sp|O76217|PE1_ANOGA Peritrophin-1 OS=Anopheles gambiae GN=Aper1 PE=2 SV=2
Length = 153
Score = 31.6 bits (70), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 10 PDDFGFYPHHISCDKYWKCDGREAEL-KTCGNGLAFD 45
PD + PH C KY+ CD EL +TC +GL ++
Sbjct: 101 PDHMVYIPHETDCGKYYICDPYGVELEQTCPSGLHWN 137
Score = 31.2 bits (69), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 40/115 (34%), Gaps = 10/115 (8%)
Query: 92 CDVFWNCWNGESSRYQCSPGLAYDREARVCMWADQVPECKIEEVANGFNCPAAGEIAAGG 151
CD F C +G +C PGL ++ + C + Q +C N P
Sbjct: 40 CDKFLICNHGTPVVSKCPPGLLWNDSQKQCDYPAQA-QCAPGVTPNTEPAPKPSPNCPPE 98
Query: 152 SFSRHA----HPDDCRKYYIC-LEGTAREYGCPIGT----VFKIGDGEGTGNCED 197
H H DC KYYIC G E CP G V D CE+
Sbjct: 99 YDPDHMVYIPHETDCGKYYICDPYGVELEQTCPSGLHWNPVVNYCDFPELAQCEE 153
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.137 0.451
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,012,286
Number of Sequences: 539616
Number of extensions: 6236215
Number of successful extensions: 18596
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 148
Number of HSP's that attempted gapping in prelim test: 17724
Number of HSP's gapped (non-prelim): 913
length of query: 281
length of database: 191,569,459
effective HSP length: 116
effective length of query: 165
effective length of database: 128,974,003
effective search space: 21280710495
effective search space used: 21280710495
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)