Query psy13460
Match_columns 281
No_of_seqs 250 out of 1629
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 19:58:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13460.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13460hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1dqc_A Tachycitin; disulfide-r 99.3 6.6E-13 2.2E-17 96.6 4.9 59 4-68 7-65 (74)
2 1dqc_A Tachycitin; disulfide-r 99.3 4.4E-12 1.5E-16 92.3 6.0 56 77-134 10-65 (74)
3 1wb0_A Chitinase 1, chitotrios 98.3 8.5E-08 2.9E-12 91.8 0.0 48 77-124 397-445 (445)
4 1wb0_A Chitinase 1, chitotrios 98.2 2E-07 6.9E-12 89.1 0.0 42 153-198 404-445 (445)
5 3ssb_I IMPI alpha, inducible m 34.4 5.8 0.0002 23.3 -0.7 22 177-203 8-29 (32)
6 1hx2_A BSTI; beta-sheet disulf 26.3 44 0.0015 21.8 2.6 16 106-121 2-17 (60)
7 1xu2_R Tumor necrosis factor r 22.9 33 0.0011 21.9 1.3 19 106-124 2-20 (47)
8 1ccv_A AMCI, chymotrypsin inhi 18.3 40 0.0014 21.7 1.0 19 106-125 36-54 (56)
9 2p3f_N Anti-coagulant protein 17.8 45 0.0015 23.3 1.2 20 106-125 49-68 (78)
10 2b5b_A Defensin; antibiotic; N 14.5 68 0.0023 18.5 1.2 13 18-30 20-32 (36)
No 1
>1dqc_A Tachycitin; disulfide-rich, antimicrobial protein; NMR {Tachypleus tridentatus} SCOP: g.31.1.1
Probab=99.34 E-value=6.6e-13 Score=96.65 Aligned_cols=59 Identities=25% Similarity=0.499 Sum_probs=53.8
Q ss_pred CCCCCCCCCCcceeCCCCCcceEEcCCCcceEeeCCCCCeecCCCCccccccccccccccCCCCC
Q psy13460 4 KDDFQCPDDFGFYPHHISCDKYWKCDGREAELKTCGNGLAFDDTDPKYLKENCDYLHNVDCGSRS 68 (281)
Q Consensus 4 ~~~f~C~~~~G~~p~p~~C~kY~~C~~g~~~~~~Cp~g~~Fd~~~~~~~~~~C~~~~~v~C~~~~ 68 (281)
...+.|+. +|+|+||.+|++||+|++|.++.+.||.|++||+. ++.|+++.+|.|....
T Consensus 7 ~~~~~C~~-~G~~~~p~dC~~fy~C~~G~~~~~~Cp~Gl~Fn~~-----~~~Cd~p~~v~C~~~~ 65 (74)
T 1dqc_A 7 GRYSPCLD-DGPNVNLYSCCSFYNCHKCLARLENCPKGLHYNAY-----LKVCDWPSKAGCTSVN 65 (74)
T ss_dssp GGGCCSSS-SEEECCSSCSSEEEEEETTEEEEEECTTSCEEETT-----TTEEECTTTTTCCSSC
T ss_pred CCCCcCCC-CCEeCCcccCcceeECCCCcEEEeECcCCCEEChh-----hCcCcCcccCCCCCCC
Confidence 34678976 89999999999999999999999999999999999 9999999999998653
No 2
>1dqc_A Tachycitin; disulfide-rich, antimicrobial protein; NMR {Tachypleus tridentatus} SCOP: g.31.1.1
Probab=99.28 E-value=4.4e-12 Score=92.25 Aligned_cols=56 Identities=25% Similarity=0.565 Sum_probs=51.3
Q ss_pred CCCCCCCccccCCCCCCccEEecCCceeEEeCCCCCeeecCCCcccCCCCCCCCCCcc
Q psy13460 77 PKCPRLYGIFPDEVKCDVFWNCWNGESSRYQCSPGLAYDREARVCMWADQVPECKIEE 134 (281)
Q Consensus 77 ~~C~~~~G~~p~p~~C~~Y~~C~~G~~~~~~Cp~G~~Fd~~~~~C~~~~~v~~C~~~~ 134 (281)
..|+. +|+|+|+.+|++||+|.+|.++++.||.|++||+.++.|+|+.+| .|....
T Consensus 10 ~~C~~-~G~~~~p~dC~~fy~C~~G~~~~~~Cp~Gl~Fn~~~~~Cd~p~~v-~C~~~~ 65 (74)
T 1dqc_A 10 SPCLD-DGPNVNLYSCCSFYNCHKCLARLENCPKGLHYNAYLKVCDWPSKA-GCTSVN 65 (74)
T ss_dssp CCSSS-SEEECCSSCSSEEEEEETTEEEEEECTTSCEEETTTTEEECTTTT-TCCSSC
T ss_pred CcCCC-CCEeCCcccCcceeECCCCcEEEeECcCCCEEChhhCcCcCcccC-CCCCCC
Confidence 46876 899999999999999999999999999999999999999999999 687643
No 3
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A*
Probab=98.29 E-value=8.5e-08 Score=91.75 Aligned_cols=48 Identities=23% Similarity=0.701 Sum_probs=0.0
Q ss_pred CCCCCC-CccccCCCCCCccEEecCCceeEEeCCCCCeeecCCCcccCC
Q psy13460 77 PKCPRL-YGIFPDEVKCDVFWNCWNGESSRYQCSPGLAYDREARVCMWA 124 (281)
Q Consensus 77 ~~C~~~-~G~~p~p~~C~~Y~~C~~G~~~~~~Cp~G~~Fd~~~~~C~~~ 124 (281)
..|+.. +|+|+||.+|++||+|.+|.++.+.||.|++||+.++.|+|+
T Consensus 397 ~~C~~~~~G~~~~p~~C~~fy~C~~g~~~~~~Cp~Gl~f~~~~~~Cd~p 445 (445)
T 1wb0_A 397 TFCQGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKCCTWN 445 (445)
T ss_dssp -------------------------------------------------
T ss_pred CcCCCCCCcccCCCCCCCcccCCCCCCEEeCCCcCCCEECcccCCCCCC
Confidence 469874 799999999999999999999999999999999999999985
No 4
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A*
Probab=98.19 E-value=2e-07 Score=89.14 Aligned_cols=42 Identities=24% Similarity=0.464 Sum_probs=0.0
Q ss_pred ccccCCCCCCcceEEccCCeEEEccCCCCCeEccccCCCccCCCCC
Q psy13460 153 FSRHAHPDDCRKYYICLEGTAREYGCPIGTVFKIGDGEGTGNCEDP 198 (281)
Q Consensus 153 ~~~~p~p~dC~~Yy~C~~G~~~~~~Cp~G~~Fd~~~~~~~~~C~~~ 198 (281)
.++++||.+|++||+|.+|.+..+.||.|++||+. ++.|+||
T Consensus 404 ~G~~~~p~~C~~fy~C~~g~~~~~~Cp~Gl~f~~~----~~~Cd~p 445 (445)
T 1wb0_A 404 DGLYPNPRERSSFYSCAAGRLFQQSCPTGLVFSNS----CKCCTWN 445 (445)
T ss_dssp ----------------------------------------------
T ss_pred CcccCCCCCCCcccCCCCCCEEeCCCcCCCEECcc----cCCCCCC
Confidence 57899999999999999999999999999999999 9999996
No 5
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=34.38 E-value=5.8 Score=23.25 Aligned_cols=22 Identities=23% Similarity=0.489 Sum_probs=17.3
Q ss_pred cCCCCCeEccccCCCccCCCCCCCCCC
Q psy13460 177 GCPIGTVFKIGDGEGTGNCEDPEEVPG 203 (281)
Q Consensus 177 ~Cp~G~~Fd~~~~~~~~~C~~~~~v~C 203 (281)
.|+.|++.|. .+.|+.+++-+|
T Consensus 8 ~C~~G~vrn~-----~G~CV~~~~Cp~ 29 (32)
T 3ssb_I 8 YCEDGYARDV-----NGKCIPIKDCPK 29 (32)
T ss_dssp EECTTEEECT-----TSCEEEGGGCCC
T ss_pred CcCCCcEECC-----CCCEECHHHCcC
Confidence 5889999986 688988776554
No 6
>1hx2_A BSTI; beta-sheet disulfide-rich, hydrolase inhibitor; NMR {Bombina bombina} SCOP: g.22.1.2
Probab=26.26 E-value=44 Score=21.76 Aligned_cols=16 Identities=31% Similarity=0.920 Sum_probs=11.4
Q ss_pred EeCCCCCeeecCCCcc
Q psy13460 106 YQCSPGLAYDREARVC 121 (281)
Q Consensus 106 ~~Cp~G~~Fd~~~~~C 121 (281)
+.||.+.+|+.=...|
T Consensus 2 ~~Cp~n~~y~~Cgs~C 17 (60)
T 1hx2_A 2 FVCPPGQTFQTCASSC 17 (60)
T ss_dssp CCCCTTEEEESSCCSS
T ss_pred CcCcCCCEeccccCcC
Confidence 4689999998754444
No 7
>1xu2_R Tumor necrosis factor receptor superfamily member; TNFSF, cytokine, CRD, jelly-roll, cysteine-rich, H growth factor receptor complex; 2.35A {Homo sapiens} SCOP: g.24.1.2 PDB: 2kn1_A* 1oqd_K
Probab=22.92 E-value=33 Score=21.87 Aligned_cols=19 Identities=26% Similarity=0.412 Sum_probs=15.5
Q ss_pred EeCCCCCeeecCCCcccCC
Q psy13460 106 YQCSPGLAYDREARVCMWA 124 (281)
Q Consensus 106 ~~Cp~G~~Fd~~~~~C~~~ 124 (281)
..||...+||.....|+.=
T Consensus 2 ~~C~~eqYwD~LL~~C~pC 20 (47)
T 1xu2_R 2 GQCSQNEYFDSLLHACIPC 20 (47)
T ss_dssp --CCTTEEEETTTTEEEEG
T ss_pred CCCcHHHHHHHHHhcccch
Confidence 4799999999999999863
No 8
>1ccv_A AMCI, chymotrypsin inhibitor; protein inhibitor, hemolymph, canonical inhibitor, hydrolase inhibitor; NMR {Apis mellifera} SCOP: g.22.1.1
Probab=18.27 E-value=40 Score=21.72 Aligned_cols=19 Identities=26% Similarity=0.672 Sum_probs=15.0
Q ss_pred EeCCCCCeeecCCCcccCCC
Q psy13460 106 YQCSPGLAYDREARVCMWAD 125 (281)
Q Consensus 106 ~~Cp~G~~Fd~~~~~C~~~~ 125 (281)
=.|+.|+++|.. +.|+...
T Consensus 36 C~C~~G~v~~~~-g~CV~~~ 54 (56)
T 1ccv_A 36 CQCQEGFLRNGE-GACVLPE 54 (56)
T ss_dssp EEECTTCEEETT-TEEECGG
T ss_pred CcCCCCeeECCC-CcccChh
Confidence 489999999874 7888653
No 9
>2p3f_N Anti-coagulant protein 5; factor XA, hydrolase; 3.10A {Ancylostoma caninum}
Probab=17.76 E-value=45 Score=23.33 Aligned_cols=20 Identities=20% Similarity=0.428 Sum_probs=16.9
Q ss_pred EeCCCCCeeecCCCcccCCC
Q psy13460 106 YQCSPGLAYDREARVCMWAD 125 (281)
Q Consensus 106 ~~Cp~G~~Fd~~~~~C~~~~ 125 (281)
=.|+.|++.|..++.|+...
T Consensus 49 C~C~~G~vr~~~~g~CV~~~ 68 (78)
T 2p3f_N 49 CVCKDGFYRDTVIGDCVREE 68 (78)
T ss_dssp EEECSSCEEETTTTEEECGG
T ss_pred cCcCCCEeEcCCCCceECHH
Confidence 37999999998779999865
No 10
>2b5b_A Defensin; antibiotic; NMR {Caretta caretta}
Probab=14.54 E-value=68 Score=18.50 Aligned_cols=13 Identities=31% Similarity=0.570 Sum_probs=10.4
Q ss_pred CCCCCcceEEcCC
Q psy13460 18 HHISCDKYWKCDG 30 (281)
Q Consensus 18 ~p~~C~kY~~C~~ 30 (281)
.|.+|.+|+-|+.
T Consensus 20 lpyncgkyiccvp 32 (36)
T 2b5b_A 20 LPYNCGKYICCVP 32 (36)
T ss_dssp CSSSBCCSSCSSS
T ss_pred cCccCCceEEeEE
Confidence 4569999998874
Done!