Query psy13461
Match_columns 194
No_of_seqs 239 out of 1092
Neff 6.8
Searched_HMMs 29240
Date Fri Aug 16 19:59:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13461.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13461hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ymu_A WD-40 repeat protein; u 99.7 3.8E-17 1.3E-21 145.5 11.0 97 1-106 23-123 (577)
2 2ynn_A Coatomer subunit beta'; 99.7 5.7E-17 2E-21 135.3 10.9 98 1-106 20-122 (304)
3 3ow8_A WD repeat-containing pr 99.7 7.2E-17 2.5E-21 136.5 11.5 97 2-106 214-315 (321)
4 3ow8_A WD repeat-containing pr 99.7 1.1E-16 3.9E-21 135.3 11.3 97 2-106 172-273 (321)
5 2ymu_A WD-40 repeat protein; u 99.7 1.2E-16 4.2E-21 142.1 11.2 97 1-106 474-574 (577)
6 3fm0_A Protein CIAO1; WDR39,SG 99.7 1.3E-16 4.5E-21 135.6 10.3 98 1-106 23-130 (345)
7 4h5i_A Guanine nucleotide-exch 99.7 9.7E-17 3.3E-21 138.2 9.4 98 1-106 226-337 (365)
8 1got_B GT-beta; complex (GTP-b 99.7 2.8E-16 9.6E-21 133.1 12.0 98 1-106 233-337 (340)
9 3iz6_a 40S ribosomal protein R 99.6 5.6E-16 1.9E-20 133.3 10.2 97 2-106 257-369 (380)
10 1vyh_C Platelet-activating fac 99.6 4.1E-16 1.4E-20 135.9 9.4 97 2-106 116-217 (410)
11 2pbi_B Guanine nucleotide-bind 99.6 1.2E-15 4.2E-20 130.4 12.1 97 2-106 248-351 (354)
12 2hes_X YDR267CP; beta-propelle 99.6 8.8E-16 3E-20 129.7 10.9 97 2-106 66-178 (330)
13 4gqb_B Methylosome protein 50; 99.6 8.5E-16 2.9E-20 132.0 10.9 97 2-106 222-325 (344)
14 4ery_A WD repeat-containing pr 99.6 1.4E-15 4.9E-20 125.9 11.8 97 2-106 31-132 (312)
15 2ynn_A Coatomer subunit beta'; 99.6 1.2E-15 4.2E-20 127.2 10.7 97 2-106 63-166 (304)
16 1got_B GT-beta; complex (GTP-b 99.6 1.8E-15 6.3E-20 128.0 11.6 97 2-106 192-295 (340)
17 3fm0_A Protein CIAO1; WDR39,SG 99.6 2.1E-15 7E-20 128.2 11.9 97 2-106 69-175 (345)
18 1nr0_A Actin interacting prote 99.6 1.1E-15 3.7E-20 139.7 10.7 97 2-106 456-561 (611)
19 3frx_A Guanine nucleotide-bind 99.6 2.7E-15 9.1E-20 126.2 12.1 97 1-106 203-311 (319)
20 3frx_A Guanine nucleotide-bind 99.6 3.2E-15 1.1E-19 125.7 12.3 97 2-106 73-179 (319)
21 1erj_A Transcriptional repress 99.6 2.8E-15 9.7E-20 129.5 11.8 97 2-106 131-232 (393)
22 1vyh_C Platelet-activating fac 99.6 2.1E-15 7.2E-20 131.4 10.8 93 6-106 308-405 (410)
23 4g56_B MGC81050 protein; prote 99.6 1.6E-15 5.5E-20 130.0 9.8 98 1-106 233-337 (357)
24 1erj_A Transcriptional repress 99.6 2.4E-15 8.1E-20 129.9 10.9 96 2-106 72-190 (393)
25 2xzm_R RACK1; ribosome, transl 99.6 3.2E-15 1.1E-19 126.5 11.4 96 3-106 35-143 (343)
26 4ery_A WD repeat-containing pr 99.6 4.4E-15 1.5E-19 122.9 11.9 97 2-106 73-174 (312)
27 2hes_X YDR267CP; beta-propelle 99.6 6.4E-15 2.2E-19 124.4 12.5 97 2-106 115-224 (330)
28 3vl1_A 26S proteasome regulato 99.6 3.4E-15 1.2E-19 127.5 10.7 97 2-106 105-206 (420)
29 1nr0_A Actin interacting prote 99.6 3.7E-15 1.3E-19 136.2 11.4 97 2-106 155-264 (611)
30 2xzm_R RACK1; ribosome, transl 99.6 7.2E-15 2.5E-19 124.3 12.2 97 2-106 84-197 (343)
31 4h5i_A Guanine nucleotide-exch 99.6 5E-15 1.7E-19 127.5 11.1 97 1-104 140-242 (365)
32 4gqb_B Methylosome protein 50; 99.6 3.8E-15 1.3E-19 127.9 10.4 96 2-106 90-195 (344)
33 4aow_A Guanine nucleotide-bind 99.6 9.8E-15 3.4E-19 120.5 12.1 96 2-106 223-331 (340)
34 2j04_A TAU60, YPL007P, hypothe 99.6 2.6E-15 8.9E-20 139.3 9.4 94 1-106 92-205 (588)
35 2pm7_B Protein transport prote 99.6 7.5E-15 2.6E-19 122.0 10.7 98 1-106 16-126 (297)
36 3zwl_B Eukaryotic translation 99.6 1.3E-14 4.3E-19 120.3 11.4 94 1-102 39-136 (369)
37 2oaj_A Protein SNI1; WD40 repe 99.6 2.9E-15 9.8E-20 144.2 8.0 97 1-106 442-599 (902)
38 2pbi_B Guanine nucleotide-bind 99.6 1.7E-14 5.9E-19 123.2 12.0 97 2-106 162-265 (354)
39 3f3f_A Nucleoporin SEH1; struc 99.6 1.9E-14 6.5E-19 117.3 11.7 97 2-106 19-137 (351)
40 1sq9_A Antiviral protein SKI8; 99.6 1.3E-14 4.4E-19 122.7 10.9 97 2-106 241-389 (397)
41 1pgu_A Actin interacting prote 99.6 1.6E-14 5.5E-19 128.4 11.8 96 2-106 496-608 (615)
42 2w18_A PALB2, fancn, partner a 99.6 4.8E-15 1.7E-19 130.2 8.0 103 2-106 186-351 (356)
43 3bg1_A Protein SEC13 homolog; 99.6 9.7E-15 3.3E-19 122.6 9.0 97 2-106 21-130 (316)
44 3lrv_A PRE-mRNA-splicing facto 99.6 1.5E-14 5.2E-19 122.1 10.2 96 2-106 133-238 (343)
45 2aq5_A Coronin-1A; WD40 repeat 99.6 2.4E-14 8.3E-19 122.9 11.6 97 2-106 89-201 (402)
46 3dwl_C Actin-related protein 2 99.5 3.9E-15 1.3E-19 125.6 5.9 97 2-106 19-125 (377)
47 3vu4_A KMHSV2; beta-propeller 99.5 7.7E-15 2.6E-19 125.5 7.8 98 1-106 202-330 (355)
48 3mkq_A Coatomer beta'-subunit; 99.5 1.8E-14 6.3E-19 133.1 10.8 98 1-106 20-122 (814)
49 1r5m_A SIR4-interacting protei 99.5 2.8E-14 9.5E-19 120.4 10.9 97 2-106 53-174 (425)
50 3dwl_C Actin-related protein 2 99.5 1.6E-14 5.3E-19 121.9 9.1 97 2-106 108-230 (377)
51 3zwl_B Eukaryotic translation 99.5 5.5E-14 1.9E-18 116.4 12.2 98 1-106 225-340 (369)
52 1gxr_A ESG1, transducin-like e 99.5 4.5E-14 1.6E-18 115.8 11.5 97 2-106 232-331 (337)
53 3k26_A Polycomb protein EED; W 99.5 3.4E-14 1.2E-18 117.8 10.4 97 2-106 77-186 (366)
54 4e54_B DNA damage-binding prot 99.5 1.2E-14 4E-19 127.0 7.8 97 2-106 127-234 (435)
55 3dm0_A Maltose-binding peripla 99.5 4.5E-14 1.5E-18 130.3 11.8 97 2-106 438-544 (694)
56 2j04_B YDR362CP, TAU91; beta p 99.5 4.2E-15 1.4E-19 135.6 4.8 97 2-106 318-422 (524)
57 3lrv_A PRE-mRNA-splicing facto 99.5 9.6E-15 3.3E-19 123.3 6.5 96 2-106 178-286 (343)
58 3vu4_A KMHSV2; beta-propeller 99.5 4.9E-14 1.7E-18 120.4 11.0 96 2-106 145-265 (355)
59 4ggc_A P55CDC, cell division c 99.5 5.7E-14 2E-18 114.8 10.8 95 2-106 33-132 (318)
60 3mmy_A MRNA export factor; mRN 99.5 5.6E-14 1.9E-18 116.4 10.7 97 2-106 47-154 (368)
61 2pm7_B Protein transport prote 99.5 8.1E-14 2.8E-18 115.7 11.7 97 2-106 107-232 (297)
62 1gxr_A ESG1, transducin-like e 99.5 8.8E-14 3E-18 114.1 11.7 97 2-106 191-290 (337)
63 4gga_A P55CDC, cell division c 99.5 7.2E-14 2.5E-18 121.2 11.8 100 2-106 284-389 (420)
64 4gq1_A NUP37; propeller, trans 99.5 8.4E-15 2.9E-19 126.9 5.8 97 2-106 97-212 (393)
65 1k8k_C P40, ARP2/3 complex 41 99.5 6.1E-14 2.1E-18 117.1 10.7 97 2-106 16-121 (372)
66 3vl1_A 26S proteasome regulato 99.5 9.9E-15 3.4E-19 124.6 5.9 98 1-106 146-272 (420)
67 3jrp_A Fusion protein of prote 99.5 5.7E-14 1.9E-18 117.0 10.4 98 1-106 18-128 (379)
68 3ei3_B DNA damage-binding prot 99.5 3.4E-14 1.2E-18 120.5 9.1 97 2-106 81-188 (383)
69 4g56_B MGC81050 protein; prote 99.5 3E-14 1E-18 122.0 8.5 97 1-106 101-207 (357)
70 3iz6_a 40S ribosomal protein R 99.5 5.3E-14 1.8E-18 120.9 9.8 96 3-106 215-323 (380)
71 3dm0_A Maltose-binding peripla 99.5 1.1E-13 3.9E-18 127.7 12.2 97 2-106 390-497 (694)
72 3bg1_A Protein SEC13 homolog; 99.5 5.2E-14 1.8E-18 118.1 9.0 92 6-106 179-287 (316)
73 2pm9_A Protein WEB1, protein t 99.5 4E-14 1.4E-18 120.2 8.1 98 1-106 19-139 (416)
74 1r5m_A SIR4-interacting protei 99.5 1.3E-13 4.5E-18 116.3 11.2 96 2-106 297-419 (425)
75 3ei3_B DNA damage-binding prot 99.5 1.9E-13 6.5E-18 115.9 11.9 96 2-106 171-276 (383)
76 4e54_B DNA damage-binding prot 99.5 5.9E-14 2E-18 122.5 8.9 97 2-106 172-276 (435)
77 3f3f_A Nucleoporin SEH1; struc 99.5 1.8E-13 6.1E-18 111.5 11.1 65 36-106 214-331 (351)
78 2oaj_A Protein SNI1; WD40 repe 99.5 8.8E-14 3E-18 133.9 10.5 97 1-106 24-123 (902)
79 2j04_A TAU60, YPL007P, hypothe 99.5 6.2E-14 2.1E-18 130.1 7.9 93 1-106 136-248 (588)
80 2oit_A Nucleoporin 214KDA; NH2 99.5 3.7E-14 1.3E-18 125.7 6.2 97 2-106 100-217 (434)
81 2aq5_A Coronin-1A; WD40 repeat 99.5 1.8E-13 6.3E-18 117.4 9.9 97 2-106 139-248 (402)
82 1yfq_A Cell cycle arrest prote 99.5 1.2E-13 3.9E-18 114.4 8.2 96 2-106 19-125 (342)
83 3i2n_A WD repeat-containing pr 99.5 9E-14 3.1E-18 115.2 7.5 97 2-106 217-347 (357)
84 1sq9_A Antiviral protein SKI8; 99.5 3E-13 1E-17 114.3 10.8 96 2-106 194-316 (397)
85 1k8k_C P40, ARP2/3 complex 41 99.5 5.4E-13 1.8E-17 111.3 12.1 96 2-106 150-268 (372)
86 3dw8_B Serine/threonine-protei 99.5 1.5E-13 5E-18 118.0 8.8 96 2-106 36-201 (447)
87 3sfz_A APAF-1, apoptotic pepti 99.5 2.9E-13 1E-17 131.3 11.9 98 1-106 622-726 (1249)
88 4aow_A Guanine nucleotide-bind 99.5 4.3E-13 1.5E-17 110.6 11.2 97 2-106 46-153 (340)
89 3mmy_A MRNA export factor; mRN 99.4 3.7E-13 1.3E-17 111.4 10.5 62 2-71 94-158 (368)
90 3odt_A Protein DOA1; ubiquitin 99.4 3.6E-13 1.2E-17 109.5 9.8 94 2-106 192-290 (313)
91 3i2n_A WD repeat-containing pr 99.4 3E-13 1E-17 112.0 9.4 97 2-106 176-285 (357)
92 2pm9_A Protein WEB1, protein t 99.4 7.5E-14 2.6E-18 118.5 5.7 97 2-106 270-408 (416)
93 3gre_A Serine/threonine-protei 99.4 1.7E-13 5.7E-18 118.2 7.5 97 2-106 178-286 (437)
94 4gga_A P55CDC, cell division c 99.4 5.8E-13 2E-17 115.5 10.8 93 2-106 113-212 (420)
95 3dw8_B Serine/threonine-protei 99.4 4E-13 1.4E-17 115.3 8.9 96 2-106 101-252 (447)
96 1yfq_A Cell cycle arrest prote 99.4 9E-13 3.1E-17 109.0 10.7 94 2-105 201-316 (342)
97 3mkq_A Coatomer beta'-subunit; 99.4 5E-13 1.7E-17 123.5 9.7 98 1-106 62-166 (814)
98 3jrp_A Fusion protein of prote 99.4 7.9E-13 2.7E-17 110.1 9.8 94 5-106 171-281 (379)
99 2vdu_B TRNA (guanine-N(7)-)-me 99.4 4.8E-13 1.6E-17 117.0 8.4 97 2-106 110-223 (450)
100 4ggc_A P55CDC, cell division c 99.4 2E-12 6.8E-17 105.6 11.3 101 2-106 204-309 (318)
101 2xyi_A Probable histone-bindin 99.4 9E-13 3.1E-17 115.0 9.7 97 2-106 285-404 (430)
102 3gre_A Serine/threonine-protei 99.4 3.6E-13 1.2E-17 116.2 7.0 98 1-106 70-195 (437)
103 3jro_A Fusion protein of prote 99.4 1.4E-12 4.9E-17 122.4 10.8 98 1-106 16-126 (753)
104 1pgu_A Actin interacting prote 99.4 2.6E-12 8.9E-17 114.1 11.8 93 1-102 25-137 (615)
105 4aez_A CDC20, WD repeat-contai 99.4 2.3E-12 8E-17 110.8 10.6 99 2-106 225-330 (401)
106 3sfz_A APAF-1, apoptotic pepti 99.4 2.6E-12 8.8E-17 124.7 12.1 98 1-106 664-768 (1249)
107 2vdu_B TRNA (guanine-N(7)-)-me 99.4 1.5E-12 5.2E-17 113.8 9.4 96 2-106 157-265 (450)
108 3k26_A Polycomb protein EED; W 99.4 9.8E-13 3.3E-17 109.0 7.7 95 2-106 123-254 (366)
109 4a11_B DNA excision repair pro 99.4 2.6E-12 8.9E-17 108.0 9.8 98 1-106 50-169 (408)
110 3v7d_B Cell division control p 99.3 3.3E-12 1.1E-16 110.9 10.5 95 2-106 276-375 (464)
111 3v7d_B Cell division control p 99.3 3.4E-12 1.2E-16 110.9 10.5 96 2-106 128-230 (464)
112 1l0q_A Surface layer protein; 99.3 4.8E-12 1.6E-16 107.1 11.2 99 1-106 38-141 (391)
113 4aez_A CDC20, WD repeat-contai 99.3 4.8E-12 1.7E-16 108.8 11.0 95 2-106 142-242 (401)
114 2oit_A Nucleoporin 214KDA; NH2 99.3 6.6E-12 2.3E-16 111.2 11.9 90 2-99 157-258 (434)
115 4gq1_A NUP37; propeller, trans 99.3 1.2E-12 4.1E-17 113.3 6.2 94 5-106 155-280 (393)
116 3odt_A Protein DOA1; ubiquitin 99.3 4.8E-12 1.7E-16 102.8 8.6 95 2-106 150-249 (313)
117 2hqs_A Protein TOLB; TOLB, PAL 99.3 1.7E-11 5.9E-16 107.3 12.6 99 1-102 185-287 (415)
118 2j04_B YDR362CP, TAU91; beta p 99.3 6.1E-12 2.1E-16 114.7 9.8 96 2-106 215-336 (524)
119 1l0q_A Surface layer protein; 99.3 2.3E-11 8E-16 102.8 11.8 98 2-106 81-183 (391)
120 4a11_B DNA excision repair pro 99.3 2.6E-11 9E-16 101.8 11.4 97 2-106 107-212 (408)
121 2xyi_A Probable histone-bindin 99.3 2.5E-11 8.6E-16 105.8 10.9 97 2-106 239-347 (430)
122 2ecf_A Dipeptidyl peptidase IV 99.2 1.6E-11 5.6E-16 112.9 9.4 92 2-102 44-172 (741)
123 1z68_A Fibroblast activation p 99.2 8.7E-12 3E-16 114.8 7.5 97 1-101 22-129 (719)
124 2ecf_A Dipeptidyl peptidase IV 99.2 2.2E-11 7.4E-16 112.1 9.7 92 2-103 116-230 (741)
125 1z68_A Fibroblast activation p 99.2 1.3E-11 4.4E-16 113.7 7.3 93 2-102 67-189 (719)
126 3bws_A Protein LP49; two-domai 99.2 9E-11 3.1E-15 100.5 12.1 103 2-105 310-425 (433)
127 2w18_A PALB2, fancn, partner a 99.2 2.4E-11 8.3E-16 106.6 8.4 92 1-98 118-243 (356)
128 1xfd_A DIP, dipeptidyl aminope 99.2 6.6E-12 2.3E-16 115.1 4.7 98 1-101 23-133 (723)
129 3jro_A Fusion protein of prote 99.2 4.6E-11 1.6E-15 112.1 10.4 97 2-106 107-232 (753)
130 2ojh_A Uncharacterized protein 99.2 5.4E-11 1.8E-15 95.0 8.1 97 1-104 48-152 (297)
131 2ovr_B FBW7, F-BOX/WD repeat p 99.2 1E-10 3.4E-15 101.6 10.4 93 2-104 325-430 (445)
132 1xfd_A DIP, dipeptidyl aminope 99.2 3.1E-11 1.1E-15 110.6 7.2 95 2-103 68-194 (723)
133 1k32_A Tricorn protease; prote 99.2 1.3E-10 4.3E-15 112.5 11.2 101 1-103 385-493 (1045)
134 1p22_A F-BOX/WD-repeat protein 99.2 1.3E-10 4.5E-15 100.9 10.1 93 2-106 139-236 (435)
135 3bws_A Protein LP49; two-domai 99.1 2.2E-10 7.7E-15 98.0 10.4 93 2-101 177-273 (433)
136 2hqs_A Protein TOLB; TOLB, PAL 99.1 2.5E-10 8.7E-15 99.8 10.7 86 2-93 318-409 (415)
137 1nir_A Nitrite reductase; hemo 99.1 2.1E-10 7.2E-15 104.6 10.5 96 2-105 145-250 (543)
138 3o4h_A Acylamino-acid-releasin 99.1 1.9E-11 6.5E-16 110.2 3.5 98 2-105 157-269 (582)
139 2ojh_A Uncharacterized protein 99.1 4.4E-10 1.5E-14 89.6 10.6 94 2-102 136-237 (297)
140 1ri6_A Putative isomerase YBHE 99.1 2.4E-10 8.2E-15 93.9 9.0 98 2-105 45-153 (343)
141 4a5s_A Dipeptidyl peptidase 4 99.1 8.6E-11 3E-15 109.7 6.9 94 2-104 69-193 (740)
142 2ovr_B FBW7, F-BOX/WD repeat p 99.1 3E-10 1E-14 98.5 9.8 93 2-106 125-222 (445)
143 2z3z_A Dipeptidyl aminopeptida 99.1 2.3E-10 7.8E-15 104.9 9.3 98 2-102 128-278 (706)
144 1jmx_B Amine dehydrogenase; ox 99.1 8.1E-10 2.8E-14 91.1 10.4 95 1-102 6-112 (349)
145 1p22_A F-BOX/WD-repeat protein 99.0 7.9E-10 2.7E-14 95.9 9.9 92 3-106 263-359 (435)
146 3scy_A Hypothetical bacterial 99.0 1.3E-09 4.3E-14 91.9 10.5 95 1-101 217-325 (361)
147 4a5s_A Dipeptidyl peptidase 4 99.0 8.2E-10 2.8E-14 103.1 10.1 97 1-101 23-131 (740)
148 1pby_B Quinohemoprotein amine 99.0 1.5E-09 5E-14 88.9 9.8 98 2-100 41-153 (337)
149 3o4h_A Acylamino-acid-releasin 99.0 3.6E-10 1.2E-14 101.8 6.6 98 2-103 117-216 (582)
150 1nir_A Nitrite reductase; hemo 99.0 2.3E-09 7.9E-14 97.7 11.9 97 2-105 186-304 (543)
151 3u4y_A Uncharacterized protein 99.0 3E-09 1E-13 87.8 11.3 94 1-101 46-147 (331)
152 3hfq_A Uncharacterized protein 99.0 3.3E-09 1.1E-13 88.6 10.7 96 1-102 193-306 (347)
153 1ri6_A Putative isomerase YBHE 99.0 3.2E-09 1.1E-13 87.1 10.2 98 2-105 91-202 (343)
154 2z3z_A Dipeptidyl aminopeptida 99.0 1E-09 3.5E-14 100.5 7.9 89 2-101 89-200 (706)
155 3vgz_A Uncharacterized protein 99.0 4.2E-09 1.4E-13 87.1 10.7 95 2-102 238-334 (353)
156 3scy_A Hypothetical bacterial 99.0 8.5E-09 2.9E-13 86.7 12.7 94 2-101 162-278 (361)
157 3hfq_A Uncharacterized protein 98.9 8E-09 2.7E-13 86.3 12.4 92 1-99 92-204 (347)
158 3u4y_A Uncharacterized protein 98.9 6.4E-09 2.2E-13 85.8 11.3 97 2-105 91-200 (331)
159 2gop_A Trilobed protease; beta 98.9 2.4E-09 8.2E-14 89.1 8.7 100 1-101 65-189 (347)
160 3vgz_A Uncharacterized protein 98.9 6.7E-09 2.3E-13 85.9 10.6 97 2-105 192-296 (353)
161 1jof_A Carboxy-CIS,CIS-muconat 98.9 1.3E-08 4.5E-13 86.6 12.4 94 2-101 152-274 (365)
162 1jmx_B Amine dehydrogenase; ox 98.9 4.3E-09 1.5E-13 86.7 8.7 97 2-100 50-165 (349)
163 2bkl_A Prolyl endopeptidase; m 98.9 2.7E-09 9.1E-14 98.9 8.1 102 2-103 128-248 (695)
164 2xdw_A Prolyl endopeptidase; a 98.9 5.7E-09 2E-13 96.8 10.3 99 2-101 132-252 (710)
165 3azo_A Aminopeptidase; POP fam 98.9 4.8E-09 1.6E-13 95.4 8.4 100 2-103 137-263 (662)
166 1jof_A Carboxy-CIS,CIS-muconat 98.8 3.8E-08 1.3E-12 83.7 12.2 96 1-101 89-212 (365)
167 1k32_A Tricorn protease; prote 98.8 1.4E-08 4.9E-13 98.2 9.9 93 1-102 344-441 (1045)
168 1pby_B Quinohemoprotein amine 98.8 1.9E-08 6.3E-13 82.3 8.8 87 7-100 2-100 (337)
169 3pe7_A Oligogalacturonate lyas 98.7 7.2E-08 2.5E-12 81.2 11.3 92 1-99 42-142 (388)
170 3c5m_A Oligogalacturonate lyas 98.7 3E-08 1E-12 83.2 7.0 100 2-102 245-371 (396)
171 3azo_A Aminopeptidase; POP fam 98.7 1.9E-08 6.6E-13 91.4 6.2 99 3-102 87-208 (662)
172 1q7f_A NHL, brain tumor CG1071 98.6 1.6E-07 5.6E-12 76.3 10.1 94 2-105 171-273 (286)
173 2oiz_A Aromatic amine dehydrog 98.6 2.5E-07 8.7E-12 79.4 11.6 86 2-95 261-361 (361)
174 3pe7_A Oligogalacturonate lyas 98.6 1.7E-07 5.8E-12 78.8 9.6 100 2-101 132-257 (388)
175 3c5m_A Oligogalacturonate lyas 98.5 3E-07 1E-11 77.1 9.5 90 1-101 42-136 (396)
176 2gop_A Trilobed protease; beta 98.5 2.7E-07 9.1E-12 76.6 8.3 93 5-102 23-124 (347)
177 2dg1_A DRP35, lactonase; beta 98.5 8.7E-07 3E-11 73.4 11.3 95 2-100 52-153 (333)
178 2oiz_A Aromatic amine dehydrog 98.5 2.1E-07 7.2E-12 79.9 7.2 88 1-92 56-161 (361)
179 1q7f_A NHL, brain tumor CG1071 98.5 8.5E-07 2.9E-11 72.0 10.4 95 2-105 128-231 (286)
180 1yr2_A Prolyl oligopeptidase; 98.5 4E-07 1.4E-11 85.0 8.8 100 2-102 170-288 (741)
181 3zwl_E Eukaryotic translation 98.4 9E-08 3.1E-12 60.9 2.4 40 121-160 3-42 (50)
182 3e5z_A Putative gluconolactona 98.4 1.1E-06 3.7E-11 72.0 9.5 92 1-100 34-133 (296)
183 3fvz_A Peptidyl-glycine alpha- 98.4 9.4E-07 3.2E-11 74.2 9.2 98 1-106 30-169 (329)
184 3no2_A Uncharacterized protein 98.4 1.8E-06 6.2E-11 71.8 10.3 87 5-101 4-96 (276)
185 3e5z_A Putative gluconolactona 98.4 6.2E-07 2.1E-11 73.4 7.2 96 1-106 178-281 (296)
186 1qks_A Cytochrome CD1 nitrite 98.3 3.2E-06 1.1E-10 77.8 11.2 91 4-102 165-264 (567)
187 2xdw_A Prolyl endopeptidase; a 98.3 3.7E-06 1.3E-10 77.8 11.3 97 2-102 178-306 (710)
188 1xip_A Nucleoporin NUP159; bet 98.2 5.2E-06 1.8E-10 73.4 10.1 79 9-99 139-231 (388)
189 2bkl_A Prolyl endopeptidase; m 98.2 5E-06 1.7E-10 76.8 9.9 94 2-101 175-289 (695)
190 2dg1_A DRP35, lactonase; beta 98.2 9E-06 3.1E-10 67.1 10.2 93 2-101 189-299 (333)
191 1rwi_B Serine/threonine-protei 98.2 8.3E-06 2.8E-10 65.1 9.3 97 2-106 157-258 (270)
192 1qks_A Cytochrome CD1 nitrite 98.2 1.9E-05 6.5E-10 72.6 12.9 90 1-97 203-313 (567)
193 3iuj_A Prolyl endopeptidase; h 98.2 2.9E-06 1E-10 78.8 7.2 96 2-98 136-250 (693)
194 3fvz_A Peptidyl-glycine alpha- 98.1 1.5E-05 5.1E-10 66.8 10.0 98 2-106 98-221 (329)
195 2mad_H Methylamine dehydrogena 98.1 2.4E-05 8.2E-10 67.9 11.3 101 1-101 27-144 (373)
196 3dr2_A Exported gluconolactona 98.1 2.4E-05 8.2E-10 64.7 10.5 92 1-99 51-148 (305)
197 2mad_H Methylamine dehydrogena 98.0 4.7E-05 1.6E-09 66.0 12.0 76 1-81 72-166 (373)
198 3no2_A Uncharacterized protein 98.0 1.7E-05 5.8E-10 65.8 7.7 95 2-105 84-188 (276)
199 1xip_A Nucleoporin NUP159; bet 98.0 1.4E-05 4.9E-10 70.5 7.4 87 5-106 96-185 (388)
200 1rwi_B Serine/threonine-protei 97.9 2.9E-05 9.8E-10 61.9 8.4 95 2-105 31-131 (270)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 97.9 4.1E-05 1.4E-09 62.2 9.4 91 2-101 25-136 (314)
202 2ghs_A AGR_C_1268P; regucalcin 97.9 0.00015 5E-09 60.9 13.1 91 2-99 186-289 (326)
203 2xe4_A Oligopeptidase B; hydro 97.9 2E-05 6.8E-10 74.2 8.2 98 2-100 181-289 (751)
204 1yr2_A Prolyl oligopeptidase; 97.9 7.4E-05 2.5E-09 69.6 11.4 98 2-102 216-336 (741)
205 3sjl_D Methylamine dehydrogena 97.9 3.1E-05 1.1E-09 68.4 7.9 97 1-101 84-207 (386)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 97.9 5.5E-05 1.9E-09 61.5 8.8 91 4-101 185-288 (314)
207 3g4e_A Regucalcin; six bladed 97.8 0.00023 8E-09 58.5 12.0 89 2-99 20-115 (297)
208 2ghs_A AGR_C_1268P; regucalcin 97.8 0.00011 3.7E-09 61.7 10.0 90 2-100 56-152 (326)
209 3g4e_A Regucalcin; six bladed 97.8 0.0002 6.9E-09 59.0 11.4 93 1-100 155-260 (297)
210 3sjl_D Methylamine dehydrogena 97.8 4.9E-05 1.7E-09 67.1 7.5 100 1-100 39-155 (386)
211 3dr2_A Exported gluconolactona 97.8 7E-05 2.4E-09 61.9 7.9 94 1-102 194-297 (305)
212 3dsm_A Uncharacterized protein 97.7 0.00014 4.7E-09 61.1 8.7 88 2-99 179-285 (328)
213 2z2n_A Virginiamycin B lyase; 97.7 0.00042 1.4E-08 55.4 10.9 92 2-102 22-119 (299)
214 1fwx_A Nitrous oxide reductase 97.6 0.00031 1.1E-08 65.2 10.1 94 1-101 283-407 (595)
215 2z2n_A Virginiamycin B lyase; 97.5 0.00096 3.3E-08 53.2 11.2 91 2-101 148-244 (299)
216 3dsm_A Uncharacterized protein 97.5 0.00066 2.3E-08 56.9 9.8 96 6-101 140-244 (328)
217 2qe8_A Uncharacterized protein 97.4 0.001 3.4E-08 56.0 10.1 98 2-102 74-215 (343)
218 3hrp_A Uncharacterized protein 97.3 0.001 3.6E-08 58.0 9.5 98 2-107 274-405 (409)
219 2qc5_A Streptogramin B lactona 97.3 0.0026 8.9E-08 50.6 11.1 92 2-102 27-124 (300)
220 2qe8_A Uncharacterized protein 97.3 0.00062 2.1E-08 57.3 7.7 97 2-105 202-314 (343)
221 3iuj_A Prolyl endopeptidase; h 97.3 0.0015 5.2E-08 60.5 10.9 94 2-99 182-297 (693)
222 2ece_A 462AA long hypothetical 97.3 0.0023 8E-08 57.7 11.7 98 1-100 88-206 (462)
223 2qc5_A Streptogramin B lactona 97.3 0.0033 1.1E-07 50.0 11.2 92 2-102 69-166 (300)
224 3hrp_A Uncharacterized protein 97.2 0.00066 2.3E-08 59.3 7.3 87 2-97 138-235 (409)
225 3c75_H MADH, methylamine dehyd 97.2 0.00055 1.9E-08 61.0 6.9 99 1-100 79-195 (426)
226 2ece_A 462AA long hypothetical 97.1 0.0017 5.7E-08 58.7 9.2 94 2-100 260-399 (462)
227 1mda_H Methylamine dehydrogena 97.1 0.0022 7.6E-08 55.9 9.2 86 2-91 271-366 (368)
228 3c75_H MADH, methylamine dehyd 97.1 0.0014 4.8E-08 58.4 7.9 85 2-91 326-422 (426)
229 1mda_H Methylamine dehydrogena 96.9 0.0016 5.5E-08 56.7 6.6 81 19-100 47-142 (368)
230 2iwa_A Glutamine cyclotransfer 96.8 0.0068 2.3E-07 50.7 9.8 90 2-100 112-224 (266)
231 3nol_A Glutamine cyclotransfer 96.7 0.011 3.6E-07 49.6 9.7 90 2-100 132-243 (262)
232 2xe4_A Oligopeptidase B; hydro 96.6 0.009 3.1E-07 56.1 9.9 69 2-73 228-304 (751)
233 1fwx_A Nitrous oxide reductase 96.5 0.0069 2.4E-07 56.3 8.4 82 19-105 255-354 (595)
234 3nok_A Glutaminyl cyclase; bet 96.5 0.014 4.7E-07 49.1 9.3 90 2-100 141-253 (268)
235 2p4o_A Hypothetical protein; p 96.2 0.027 9.2E-07 46.3 9.6 89 3-100 175-276 (306)
236 3mbr_X Glutamine cyclotransfer 96.1 0.035 1.2E-06 45.9 9.7 90 2-100 110-222 (243)
237 2hz6_A Endoplasmic reticulum t 95.8 0.0096 3.3E-07 50.9 5.0 67 5-79 8-75 (369)
238 1npe_A Nidogen, entactin; glyc 95.7 0.14 4.6E-06 40.8 11.3 92 2-99 43-140 (267)
239 2fp8_A Strictosidine synthase; 95.6 0.15 5.2E-06 41.8 11.5 94 2-101 133-248 (322)
240 2p4o_A Hypothetical protein; p 95.4 0.17 5.7E-06 41.5 11.1 52 2-55 39-90 (306)
241 1npe_A Nidogen, entactin; glyc 95.3 0.24 8.4E-06 39.3 11.6 100 2-105 86-191 (267)
242 2hz6_A Endoplasmic reticulum t 95.3 0.0091 3.1E-07 51.0 3.0 84 2-94 126-216 (369)
243 2fp8_A Strictosidine synthase; 95.2 0.13 4.6E-06 42.2 9.9 90 2-100 26-145 (322)
244 2iwa_A Glutamine cyclotransfer 95.2 0.064 2.2E-06 44.7 7.8 93 2-102 28-125 (266)
245 2xbg_A YCF48-like protein; pho 95.1 0.22 7.7E-06 41.5 11.3 89 2-100 170-268 (327)
246 1kb0_A Quinohemoprotein alcoho 95.0 0.046 1.6E-06 50.8 7.3 75 18-98 457-536 (677)
247 3sbq_A Nitrous-oxide reductase 95.0 0.086 3E-06 49.0 8.6 64 2-72 330-407 (638)
248 1yiq_A Quinohemoprotein alcoho 94.8 0.062 2.1E-06 50.0 7.5 76 17-98 454-534 (689)
249 2ism_A Putative oxidoreductase 94.7 0.21 7.1E-06 42.4 10.1 96 2-101 38-154 (352)
250 3tc9_A Hypothetical hydrolase; 94.7 0.17 5.8E-06 44.3 9.5 65 2-73 233-301 (430)
251 3a9g_A Putative uncharacterize 94.5 0.14 4.7E-06 43.8 8.4 97 2-101 36-154 (354)
252 3pbp_A Nucleoporin NUP82; beta 94.3 0.19 6.5E-06 45.1 9.1 88 2-98 73-196 (452)
253 1kb0_A Quinohemoprotein alcoho 94.0 0.061 2.1E-06 50.0 5.5 100 5-106 323-501 (677)
254 2p9w_A MAL S 1 allergenic prot 94.0 0.21 7.1E-06 43.1 8.4 95 3-103 74-206 (334)
255 3pbp_A Nucleoporin NUP82; beta 93.9 0.22 7.5E-06 44.7 8.6 83 17-106 40-152 (452)
256 3sre_A PON1, serum paraoxonase 93.7 0.21 7.2E-06 43.2 8.0 92 2-99 172-284 (355)
257 3qqz_A Putative uncharacterize 93.6 0.76 2.6E-05 37.8 10.9 94 2-103 34-142 (255)
258 3sre_A PON1, serum paraoxonase 93.0 0.55 1.9E-05 40.6 9.6 96 5-100 124-239 (355)
259 3tc9_A Hypothetical hydrolase; 93.0 0.33 1.1E-05 42.4 8.3 96 2-105 186-294 (430)
260 3nol_A Glutamine cyclotransfer 92.5 0.32 1.1E-05 40.5 7.0 95 2-105 50-148 (262)
261 3das_A Putative oxidoreductase 92.0 0.99 3.4E-05 38.8 9.8 95 2-102 39-160 (347)
262 2xbg_A YCF48-like protein; pho 91.6 1 3.6E-05 37.3 9.4 92 2-105 212-315 (327)
263 1k3i_A Galactose oxidase precu 91.6 1.1 3.9E-05 40.8 10.3 94 2-100 193-305 (656)
264 2p9w_A MAL S 1 allergenic prot 91.3 1.5 5.1E-05 37.7 10.1 99 2-102 20-157 (334)
265 3hxj_A Pyrrolo-quinoline quino 91.3 0.61 2.1E-05 37.3 7.4 92 2-105 222-317 (330)
266 1cru_A Protein (soluble quinop 91.2 1.7 5.7E-05 38.4 10.6 99 2-102 34-164 (454)
267 4hw6_A Hypothetical protein, I 91.0 0.77 2.6E-05 40.2 8.2 64 2-72 235-303 (433)
268 3kya_A Putative phosphatase; s 90.9 0.53 1.8E-05 42.6 7.2 66 2-73 254-341 (496)
269 3hxj_A Pyrrolo-quinoline quino 90.4 0.78 2.7E-05 36.7 7.2 82 8-99 109-194 (330)
270 2g8s_A Glucose/sorbosone dehyd 90.1 0.97 3.3E-05 38.2 7.8 96 2-101 25-149 (353)
271 1ijq_A LDL receptor, low-densi 90.1 4.4 0.00015 33.2 11.8 78 16-97 97-179 (316)
272 3mbr_X Glutamine cyclotransfer 89.5 1.5 5.2E-05 35.9 8.2 90 2-100 28-121 (243)
273 1yiq_A Quinohemoprotein alcoho 89.5 0.49 1.7E-05 43.9 5.9 44 63-106 454-499 (689)
274 3v64_C Agrin; beta propeller, 88.3 5.7 0.00019 33.2 11.4 76 17-97 137-218 (349)
275 3a9g_A Putative uncharacterize 88.3 1.8 6.2E-05 36.7 8.2 62 38-99 136-215 (354)
276 3nok_A Glutaminyl cyclase; bet 88.2 1.4 4.8E-05 36.7 7.2 87 3-99 102-197 (268)
277 1ijq_A LDL receptor, low-densi 87.2 8.3 0.00028 31.5 11.6 89 2-96 37-134 (316)
278 3v65_B Low-density lipoprotein 86.6 5 0.00017 34.1 10.1 76 17-97 180-261 (386)
279 3qqz_A Putative uncharacterize 85.9 1.5 5E-05 36.1 6.0 61 37-102 27-90 (255)
280 3sov_A LRP-6, low-density lipo 84.9 7.5 0.00026 32.2 10.2 85 17-105 100-190 (318)
281 2ad6_A Methanol dehydrogenase 84.9 1.9 6.4E-05 39.1 6.8 77 17-99 443-524 (571)
282 1tl2_A L10, protein (tachylect 84.9 4.3 0.00015 33.2 8.3 87 1-99 47-152 (236)
283 3s25_A Hypothetical 7-bladed b 84.7 2.9 9.8E-05 34.8 7.4 85 2-97 111-199 (302)
284 4hw6_A Hypothetical protein, I 84.2 8.8 0.0003 33.3 10.7 99 1-106 279-427 (433)
285 3kya_A Putative phosphatase; s 83.9 4.4 0.00015 36.5 8.7 98 2-107 200-336 (496)
286 4a2l_A BT_4663, two-component 82.9 15 0.00052 33.8 12.3 87 4-100 415-516 (795)
287 2ism_A Putative oxidoreductase 82.9 2.2 7.5E-05 35.9 6.1 18 38-55 136-153 (352)
288 3v64_C Agrin; beta propeller, 82.7 15 0.0005 30.6 11.2 87 3-95 81-172 (349)
289 4a2l_A BT_4663, two-component 82.3 14 0.00048 34.0 11.8 88 3-99 365-469 (795)
290 1cru_A Protein (soluble quinop 80.8 8 0.00027 34.0 9.1 20 37-56 144-163 (454)
291 3v65_B Low-density lipoprotein 80.5 12 0.00042 31.6 10.0 89 2-96 123-216 (386)
292 3p5b_L Low density lipoprotein 78.3 30 0.001 29.3 11.9 87 2-94 119-214 (400)
293 3zwu_A Alkaline phosphatase PH 77.3 6.5 0.00022 36.2 7.6 58 1-58 482-552 (592)
294 1k3i_A Galactose oxidase precu 77.2 9.6 0.00033 34.6 8.8 72 2-74 250-324 (656)
295 1flg_A Protein (quinoprotein e 77.0 3.8 0.00013 37.2 6.0 76 17-98 465-545 (582)
296 3p5b_L Low density lipoprotein 75.9 18 0.00062 30.8 9.7 69 3-76 210-280 (400)
297 2ad6_A Methanol dehydrogenase 75.9 4.1 0.00014 36.8 5.9 28 4-33 311-341 (571)
298 3sov_A LRP-6, low-density lipo 75.5 22 0.00077 29.2 10.0 53 37-94 79-134 (318)
299 3s25_A Hypothetical 7-bladed b 75.4 4.6 0.00016 33.5 5.7 87 2-97 60-160 (302)
300 3f7f_A Nucleoporin NUP120; nuc 75.1 5.3 0.00018 37.9 6.5 29 4-34 229-257 (729)
301 4gq2_M Nucleoporin NUP120; bet 75.1 8.1 0.00028 37.3 8.0 30 3-34 244-273 (950)
302 1flg_A Protein (quinoprotein e 74.4 3.4 0.00012 37.5 4.9 50 5-56 496-549 (582)
303 1n7d_A LDL receptor, low-densi 74.0 2.5 8.4E-05 39.4 3.9 82 16-101 473-560 (699)
304 3q7m_A Lipoprotein YFGL, BAMB; 73.4 22 0.00075 29.0 9.4 64 6-79 239-303 (376)
305 3v9f_A Two-component system se 73.3 27 0.00093 32.0 10.8 86 4-100 459-557 (781)
306 3q7m_A Lipoprotein YFGL, BAMB; 72.8 19 0.00065 29.4 8.8 26 5-32 52-77 (376)
307 2wg3_C Hedgehog-interacting pr 72.1 37 0.0013 29.9 11.1 99 2-103 21-160 (463)
308 3amr_A 3-phytase; beta-propell 71.6 46 0.0016 28.6 11.1 91 3-101 138-251 (355)
309 3s94_A LRP-6, low-density lipo 71.6 23 0.00079 32.3 9.8 85 2-92 47-137 (619)
310 3m0c_C LDL receptor, low-densi 71.3 37 0.0013 32.1 11.4 52 37-93 471-525 (791)
311 4a9v_A PHOX; hydrolase, beta-p 70.9 12 0.00043 34.5 7.7 58 2-59 483-553 (592)
312 3amr_A 3-phytase; beta-propell 70.3 8 0.00027 33.4 6.0 30 63-92 49-78 (355)
313 3v9f_A Two-component system se 69.0 34 0.0012 31.3 10.5 86 4-99 372-467 (781)
314 3m0c_C LDL receptor, low-densi 67.5 59 0.002 30.7 11.9 89 4-97 480-573 (791)
315 3sbq_A Nitrous-oxide reductase 66.2 13 0.00046 34.5 6.9 74 2-77 385-482 (638)
316 1n7d_A LDL receptor, low-densi 65.9 7.7 0.00026 36.0 5.4 92 2-99 413-514 (699)
317 2g8s_A Glucose/sorbosone dehyd 65.2 9.7 0.00033 31.9 5.5 54 1-55 136-216 (353)
318 1kv9_A Type II quinohemoprotei 62.8 29 0.00098 31.7 8.6 71 2-80 237-341 (668)
319 3das_A Putative oxidoreductase 58.6 20 0.0007 30.5 6.4 53 2-55 147-220 (347)
320 1w6s_A Methanol dehydrogenase 55.7 14 0.00048 33.7 5.1 50 5-56 483-536 (599)
321 1kv9_A Type II quinohemoprotei 53.7 18 0.00062 33.1 5.5 58 17-80 437-496 (668)
322 4fhn_B Nucleoporin NUP120; pro 53.5 12 0.00041 36.7 4.5 29 3-33 246-274 (1139)
323 1w6s_A Methanol dehydrogenase 52.5 27 0.00093 31.8 6.5 73 17-95 452-529 (599)
324 4a0p_A LRP6, LRP-6, low-densit 50.2 1.4E+02 0.0047 27.1 10.9 91 2-98 44-140 (628)
325 4a0p_A LRP6, LRP-6, low-densit 49.9 1.5E+02 0.0051 26.9 11.9 57 38-99 390-450 (628)
326 3zwu_A Alkaline phosphatase PH 48.7 33 0.0011 31.5 6.4 63 38-100 477-549 (592)
327 1tl2_A L10, protein (tachylect 47.9 37 0.0013 27.6 5.9 49 2-54 95-152 (236)
328 4gq2_M Nucleoporin NUP120; bet 46.1 27 0.00094 33.6 5.7 35 38-78 237-272 (950)
329 4h3o_A Lectin; cadmium, plant 46.0 36 0.0012 23.5 5.0 50 6-55 13-68 (105)
330 1b2p_A Protein (lectin); manno 43.9 81 0.0028 22.1 6.8 48 3-54 27-77 (119)
331 3ei3_A DNA damage-binding prot 43.3 81 0.0028 31.2 8.6 57 8-72 525-590 (1158)
332 4a9v_A PHOX; hydrolase, beta-p 39.6 69 0.0024 29.5 7.0 65 37-101 476-550 (592)
333 4fhn_B Nucleoporin NUP120; pro 39.5 21 0.00072 35.0 3.8 35 38-78 239-274 (1139)
334 3s94_A LRP-6, low-density lipo 34.4 2.6E+02 0.0089 25.2 11.1 77 17-98 370-452 (619)
335 3q2b_A Pfadf1, cofilin/actin-d 32.7 30 0.001 24.9 2.8 52 64-124 64-120 (124)
336 2wg3_C Hedgehog-interacting pr 32.7 57 0.0019 28.7 5.2 56 38-100 15-91 (463)
337 4hvt_A Ritya.17583.B, post-pro 31.2 1.5E+02 0.0051 27.5 8.0 93 2-94 137-252 (711)
338 2uvk_A YJHT; unknown function, 30.2 43 0.0015 27.1 3.8 59 19-77 286-346 (357)
339 2zwa_A Leucine carboxyl methyl 28.7 2.2E+02 0.0074 26.0 8.6 71 4-74 499-578 (695)
340 3s9j_A Member of DUF4221 famil 27.8 2.6E+02 0.009 23.7 8.5 66 7-79 40-116 (369)
341 3r0e_B Lectin; carbohydrate bi 27.7 95 0.0032 21.4 4.7 39 16-54 32-70 (110)
342 3f7f_A Nucleoporin NUP120; nuc 26.4 89 0.0031 29.5 5.5 33 39-79 224-257 (729)
343 3ii7_A Kelch-like protein 7; p 25.0 2.4E+02 0.0083 21.8 7.9 95 5-101 55-158 (306)
344 2ldu_A Heat shock factor prote 24.4 40 0.0014 24.5 2.2 15 40-54 35-49 (125)
345 2e4m_C HA-17; botulinum toxin, 24.3 2.1E+02 0.0073 21.0 9.3 84 2-91 7-114 (146)
346 2xzh_A Clathrin heavy chain 1; 23.8 3E+02 0.01 23.7 7.9 61 2-77 267-327 (365)
347 3mez_A Mannose-specific lectin 23.1 1.2E+02 0.0041 20.9 4.5 40 16-55 28-67 (111)
348 2lll_A Lamin-B2; immunoglobuli 21.9 2.4E+02 0.0082 20.7 9.2 18 81-98 107-124 (139)
349 2vpj_A Kelch-like protein 12; 20.8 2.9E+02 0.0099 21.2 7.8 94 5-101 159-262 (301)
350 1bpo_A Protein (clathrin); cla 20.3 4E+02 0.014 23.9 8.2 61 2-77 266-326 (494)
No 1
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.71 E-value=3.8e-17 Score=145.47 Aligned_cols=97 Identities=15% Similarity=0.300 Sum_probs=85.4
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEee--eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEe
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNA--AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKR 78 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~--~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~ 78 (194)
.|||||++||+|+ .||+|++||.+ ++++.+ +|...|++++|||||++|||++. |+.++|||.+|+++..
T Consensus 23 a~spdg~~las~~--~d~~v~iWd~~-~~~~~~l~gh~~~V~~l~fspdg~~las~~~------d~~i~vWd~~~~~~~~ 93 (577)
T 2ymu_A 23 AFSPDGQTIASAS--DDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASASD------DKTVKLWNRNGQLLQT 93 (577)
T ss_dssp EECTTSSCEEEEE--TTSEEEEECTT-SCEEEEEECCSSCEEEEEECTTSSEEEEEET------TSCEEEEETTSCEEEE
T ss_pred EECCCCCEEEEEe--CCCEEEEEECC-CCEEEEEeCCCCCEEEEEECCCCCEEEEEeC------CCEEEEEECCCCEEEE
Confidence 3899999999999 79999999974 455554 34578999999999999999995 9999999999999988
Q ss_pred eC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 79 FN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 79 ~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+. ...|..++|+|+++.|++++.++.++
T Consensus 94 ~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~ 123 (577)
T 2ymu_A 94 LTGHSSSVRGVAFSPDGQTIASASDDKTVK 123 (577)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EECCCCCEEEEEECCCCCEEEEEcCCCcee
Confidence 75 67899999999999999999988775
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.70 E-value=5.7e-17 Score=135.34 Aligned_cols=98 Identities=10% Similarity=0.141 Sum_probs=87.5
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEE
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIK 77 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~ 77 (194)
.|||+|++||+|+ .||+|++||+.++..+... +...|++++|+|+|++||||+. |+.++|||+ .|+++.
T Consensus 20 ~fsp~~~~l~s~~--~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~------d~~i~vwd~~~~~~~~ 91 (304)
T 2ynn_A 20 DFHPTEPWVLTTL--YSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD------DFRIRVFNYNTGEKVV 91 (304)
T ss_dssp EECSSSSEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET------TSEEEEEETTTCCEEE
T ss_pred EECCCCCEEEEEc--CCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECC------CCEEEEEECCCCcEEE
Confidence 3899999999999 7999999999988776653 4467999999999999999995 999999999 588887
Q ss_pred eeC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 78 RFN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 78 ~~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
.+. ...|..++|+|+++.|+|++.+++|+
T Consensus 92 ~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~ 122 (304)
T 2ynn_A 92 DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVK 122 (304)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred EEeCCCCcEEEEEEcCCCCEEEEECCCCeEE
Confidence 764 67899999999999999999999886
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.70 E-value=7.2e-17 Score=136.54 Aligned_cols=97 Identities=14% Similarity=0.216 Sum_probs=86.2
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKR 78 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~ 78 (194)
|||+|++||+|+ .||+|++||+.+..++.+. |...|++++|+|+|++||||+. |+.++|||+ +|+++..
T Consensus 214 ~spd~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~------D~~v~iwd~~~~~~~~~ 285 (321)
T 3ow8_A 214 FSPDSQLLVTAS--DDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSS------DKSVKVWDVGTRTCVHT 285 (321)
T ss_dssp ECTTSCEEEEEC--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET------TSCEEEEETTTTEEEEE
T ss_pred EcCCCCEEEEEc--CCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeC------CCcEEEEeCCCCEEEEE
Confidence 899999999999 7999999999987776553 4467999999999999999995 999999999 5888887
Q ss_pred eC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 79 FN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 79 ~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+. ...|+.++|+|++..|+|++.++.|+
T Consensus 286 ~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~ 315 (321)
T 3ow8_A 286 FFDHQDQVWGVKYNGNGSKIVSVGDDQEIH 315 (321)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTCCEE
T ss_pred EcCCCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 64 67899999999999999999998774
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.69 E-value=1.1e-16 Score=135.32 Aligned_cols=97 Identities=9% Similarity=0.182 Sum_probs=86.4
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-CcEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIKR 78 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~~l~~ 78 (194)
|||+|++||+|+ .||.|++||+.+++++.+. +...|++++|+|+|++||||+. |+.++|||+. +.++..
T Consensus 172 ~spdg~~lasg~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~------dg~i~iwd~~~~~~~~~ 243 (321)
T 3ow8_A 172 YSPDGKYLASGA--IDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD------DGYIKIYDVQHANLAGT 243 (321)
T ss_dssp ECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECT------TSCEEEEETTTCCEEEE
T ss_pred ECCCCCEEEEEc--CCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcC------CCeEEEEECCCcceeEE
Confidence 899999999999 7999999999998887664 3467999999999999999995 9999999995 777766
Q ss_pred eC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 79 FN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 79 ~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+. ...|..++|+|++..|+|++.++.|+
T Consensus 244 ~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~ 273 (321)
T 3ow8_A 244 LSGHASWVLNVAFCPDDTHFVSSSSDKSVK 273 (321)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EcCCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence 64 66799999999999999999999886
No 5
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.68 E-value=1.2e-16 Score=142.11 Aligned_cols=97 Identities=15% Similarity=0.313 Sum_probs=85.1
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEee--eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEe
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNA--AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKR 78 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~--~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~ 78 (194)
.|||+|++||+|+ .||+|++||.+ ++++.. +|...|++|+|||||++|||++. |+.++|||..|+++..
T Consensus 474 ~~spd~~~las~~--~d~~i~iw~~~-~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~------dg~v~lwd~~~~~~~~ 544 (577)
T 2ymu_A 474 AFSPDGQTIASAS--DDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASD------DKTVKLWNRNGQLLQT 544 (577)
T ss_dssp EECTTSCEEEEEE--TTSEEEEEETT-SCEEEEEECCSSCEEEEEECTTSSCEEEEET------TSEEEEECTTSCEEEE
T ss_pred EEcCCCCEEEEEe--CCCEEEEEcCC-CCEEEEEeCCCCCEEEEEEcCCCCEEEEEEC------cCEEEEEeCCCCEEEE
Confidence 3899999999999 79999999975 455444 34578999999999999999995 9999999999999987
Q ss_pred eC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 79 FN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 79 ~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+. ...|..++|+|++..|+|++.|+.|+
T Consensus 545 ~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~ 574 (577)
T 2ymu_A 545 LTGHSSSVWGVAFSPDGQTIASASSDKTVK 574 (577)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCCCEEE
Confidence 74 78899999999999999999998764
No 6
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.68 E-value=1.3e-16 Score=135.60 Aligned_cols=98 Identities=15% Similarity=0.257 Sum_probs=82.3
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEe-----eeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-C-
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMN-----AAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-G- 73 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~-----~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G- 73 (194)
.|||+|++||+|+ .||+|++||+.+...+. .+|...|++|+|||+|++||||+. |+.++||++. +
T Consensus 23 ~~sp~g~~las~~--~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~------D~~v~iw~~~~~~ 94 (345)
T 3fm0_A 23 AWNPAGTLLASCG--GDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF------DATTCIWKKNQDD 94 (345)
T ss_dssp EECTTSSCEEEEE--TTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET------TSCEEEEEECCC-
T ss_pred EECCCCCEEEEEc--CCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC------CCcEEEEEccCCC
Confidence 3899999999999 79999999988754321 234478999999999999999995 9999999995 3
Q ss_pred -cEEEeeC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 74 -KIIKRFN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 74 -~~l~~~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
.++..+. ...|..++|+|++..|+|++.++.|+
T Consensus 95 ~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~ 130 (345)
T 3fm0_A 95 FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVW 130 (345)
T ss_dssp EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEE
Confidence 2445543 67899999999999999999998875
No 7
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.68 E-value=9.7e-17 Score=138.22 Aligned_cols=98 Identities=14% Similarity=0.114 Sum_probs=81.8
Q ss_pred CccCCCCEEEEeecCCCC----eEEEEECCCCeE----Ee--eeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEe
Q psy13461 1 MKCTMGTHIVLAELRDTG----SLEFVDTGDFSV----MN--AAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWS 70 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg----~l~fwD~~~~~~----i~--~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~ 70 (194)
.|||+|+++++++. ++ .+..||+..... .. ..+...|++++|||||++||+|+. |+.|+|||
T Consensus 226 ~fspdg~~l~~~s~--d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~------D~~V~iwd 297 (365)
T 4h5i_A 226 NFIADDTVLIAASL--KKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASN------DNSIALVK 297 (365)
T ss_dssp EEEETTEEEEEEEE--SSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEET------TSCEEEEE
T ss_pred EEcCCCCEEEEEec--CCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcC------CCEEEEEE
Confidence 38999999999984 44 688899775432 11 223467999999999999999995 99999999
Q ss_pred e-cCcEEEeeC---CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 71 F-QGKIIKRFN---SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 71 ~-~G~~l~~~~---~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+ +|+++.... ...|+.++|+|+|..|+|+|.|++||
T Consensus 298 ~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvr 337 (365)
T 4h5i_A 298 LKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIH 337 (365)
T ss_dssp TTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEE
T ss_pred CCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEE
Confidence 9 588888753 67899999999999999999999997
No 8
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.67 E-value=2.8e-16 Score=133.08 Aligned_cols=98 Identities=13% Similarity=0.144 Sum_probs=85.1
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEeeecc----CceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcE
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH----HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKI 75 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h----~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~ 75 (194)
.|||+|++||+|+ .||+|++||+.+.+.+....| ..|++++|+|+|++|++|+. |+.++|||. .+..
T Consensus 233 ~~~p~~~~l~s~s--~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~------d~~i~vwd~~~~~~ 304 (340)
T 1got_B 233 CFFPNGNAFATGS--DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD------DFNCNVWDALKADR 304 (340)
T ss_dssp EECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET------TSEEEEEETTTCCE
T ss_pred EEcCCCCEEEEEc--CCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECC------CCeEEEEEcccCcE
Confidence 3899999999999 799999999998776655433 36999999999999999995 999999998 5777
Q ss_pred EEeeC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 76 IKRFN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 76 l~~~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+..+. ...|..++|+|+|..|+|++.|+.|+
T Consensus 305 ~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~ 337 (340)
T 1got_B 305 AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337 (340)
T ss_dssp EEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred eeEeecCCCcEEEEEEcCCCCEEEEEcCCccEE
Confidence 77663 67899999999999999999998774
No 9
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.64 E-value=5.6e-16 Score=133.33 Aligned_cols=97 Identities=14% Similarity=0.226 Sum_probs=83.4
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeec---------cCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAE---------HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF- 71 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~---------h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~- 71 (194)
|||+|++||+|+ .||+|++||+.++.++.... ...|++++|+|+|++|++|+. |+.++|||.
T Consensus 257 ~~p~~~~l~s~s--~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~------dg~i~vwd~~ 328 (380)
T 3iz6_a 257 FFPDGQRFGTGS--DDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS------NGDCYVWDTL 328 (380)
T ss_dssp ECTTSSEEEEEC--SSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT------TSCEEEEETT
T ss_pred EecCCCeEEEEc--CCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEEC------CCCEEEEECC
Confidence 899999999999 79999999999887765431 124899999999999999985 999999998
Q ss_pred cCcEEEee------CCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 72 QGKIIKRF------NSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 72 ~G~~l~~~------~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
.|+.+..+ ....|..++|+|++..|+|++.|+.|+
T Consensus 329 ~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~ 369 (380)
T 3iz6_a 329 LAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLK 369 (380)
T ss_dssp TCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEE
T ss_pred CCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEE
Confidence 57777654 256799999999999999999999875
No 10
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.64 E-value=4.1e-16 Score=135.86 Aligned_cols=97 Identities=16% Similarity=0.249 Sum_probs=85.7
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEee--eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-CcEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNA--AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIKR 78 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~--~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~~l~~ 78 (194)
|||+|++||+|+ .||+|++||+.+++++.+ +|...|++|+|+|+|++||||+. |+.++|||+. ++++..
T Consensus 116 ~~p~~~~l~s~s--~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~------D~~i~iwd~~~~~~~~~ 187 (410)
T 1vyh_C 116 FHPVFSVMVSAS--EDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA------DMTIKLWDFQGFECIRT 187 (410)
T ss_dssp ECSSSSEEEEEE--SSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEET------TSCCCEEETTSSCEEEC
T ss_pred EcCCCCEEEEEe--CCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeC------CCeEEEEeCCCCceeEE
Confidence 899999999999 799999999998766554 34578999999999999999995 9999999996 667776
Q ss_pred eC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 79 FN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 79 ~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+. ...|..++|+|++..|+|++.+++|+
T Consensus 188 ~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~ 217 (410)
T 1vyh_C 188 MHGHDHNVSSVSIMPNGDHIVSASRDKTIK 217 (410)
T ss_dssp CCCCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred EcCCCCCEEEEEEeCCCCEEEEEeCCCeEE
Confidence 64 67899999999999999999999886
No 11
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.64 E-value=1.2e-15 Score=130.37 Aligned_cols=97 Identities=15% Similarity=0.228 Sum_probs=84.3
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeec----cCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAE----HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKII 76 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~----h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l 76 (194)
|||+|++||+|+ .||+|++||+.+...+.... ...+++++|+|+|++|++|+. |+.++|||+ +|..+
T Consensus 248 ~~p~~~~l~s~s--~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~------d~~i~vwd~~~~~~~ 319 (354)
T 2pbi_B 248 YYPSGDAFASGS--DDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYN------DYTINVWDVLKGSRV 319 (354)
T ss_dssp ECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET------TSCEEEEETTTCSEE
T ss_pred EeCCCCEEEEEe--CCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEEC------CCcEEEEECCCCceE
Confidence 899999999999 79999999998776554322 247899999999999999995 999999998 68888
Q ss_pred EeeC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 77 KRFN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 77 ~~~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
..+. ...|..++|+|++..|+|++.+++|+
T Consensus 320 ~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~ 351 (354)
T 2pbi_B 320 SILFGHENRVSTLRVSPDGTAFCSGSWDHTLR 351 (354)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred EEEECCCCcEEEEEECCCCCEEEEEcCCCCEE
Confidence 7764 67899999999999999999998764
No 12
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.64 E-value=8.8e-16 Score=129.70 Aligned_cols=97 Identities=15% Similarity=0.348 Sum_probs=78.1
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCC-------CeEEee--eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGD-------FSVMNA--AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ 72 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~-------~~~i~~--~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~ 72 (194)
|||+|++||+|+ .||+|++||+.. ..++.. +|...|++|+|+|+|++||||+. |+.++|||+.
T Consensus 66 ~sp~~~~las~s--~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~------D~~v~iwd~~ 137 (330)
T 2hes_X 66 WRPHTSLLAAGS--FDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSR------DKSVWIWETD 137 (330)
T ss_dssp ECTTSSEEEEEE--TTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEET------TSCEEEEECC
T ss_pred ECCCCCEEEEEe--CCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeC------CCEEEEEecc
Confidence 899999999999 799999999842 334433 34578999999999999999995 9999999993
Q ss_pred -C----cEEEeeC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 73 -G----KIIKRFN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 73 -G----~~l~~~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+ +++..+. ...|..++|+|++..|+|++.+++||
T Consensus 138 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~ 178 (330)
T 2hes_X 138 ESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVR 178 (330)
T ss_dssp TTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred CCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEE
Confidence 2 3444443 67899999999999999999999886
No 13
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.64 E-value=8.5e-16 Score=132.01 Aligned_cols=97 Identities=15% Similarity=0.173 Sum_probs=77.9
Q ss_pred ccCC-CCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCC-CEEEEeecCcccccCCeEEEEeecCcEEE
Q psy13461 2 KCTM-GTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTG-RYVMSGVSLWKTKADTGYWQWSFQGKIIK 77 (194)
Q Consensus 2 fSP~-G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdG-r~lat~ss~~~~~~D~~~~IW~~~G~~l~ 77 (194)
|+|+ +++||+|+ .||+|++||+.+++++.+. |...|++|+|+|+| ++||||+. |+.++|||+....+.
T Consensus 222 ~~p~~~~~l~sg~--~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~------D~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 222 WHPQQSEVFVFGD--ENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSE------DCSLAVLDSSLSELF 293 (344)
T ss_dssp ECSSCTTEEEEEE--TTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEET------TSCEEEECTTCCEEE
T ss_pred ecCCCCcceEEec--cCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeC------CCeEEEEECCCCcEE
Confidence 6885 56888888 7999999999988776553 45789999999998 68999995 999999999644444
Q ss_pred ee--CCCCEEEEEEeeCCCce-ecccchhHHH
Q psy13461 78 RF--NSPTFCQLRWRPRPASL-LSKEQVDKIK 106 (194)
Q Consensus 78 ~~--~~~~~~~~~wrP~~~~L-ls~~~~~~Ik 106 (194)
.. +...|+.++|+|+++.| +|++.|++|+
T Consensus 294 ~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~ 325 (344)
T 4gqb_B 294 RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVV 325 (344)
T ss_dssp EECCCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEE
Confidence 44 36789999999999875 5899999885
No 14
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.64 E-value=1.4e-15 Score=125.88 Aligned_cols=97 Identities=14% Similarity=0.248 Sum_probs=85.6
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEee--eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNA--AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKR 78 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~--~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~ 78 (194)
|||+|++||+|+ .||.|++||+.+++.... .+...|++++|+|+|++||+|+. |+.++|||+ .|+++..
T Consensus 31 ~s~~~~~l~s~~--~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~------d~~i~vwd~~~~~~~~~ 102 (312)
T 4ery_A 31 FSPNGEWLASSS--ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD------DKTLKIWDVSSGKCLKT 102 (312)
T ss_dssp ECTTSSEEEEEE--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTCCEEEE
T ss_pred ECCCCCEEEEee--CCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECC------CCEEEEEECCCCcEEEE
Confidence 899999999999 799999999988776554 34478999999999999999995 999999999 4787776
Q ss_pred eC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 79 FN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 79 ~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+. ...+..+.|+|++..|++++.++.|+
T Consensus 103 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~ 132 (312)
T 4ery_A 103 LKGHSNYVFCCNFNPQSNLIVSGSFDESVR 132 (312)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCCCcEE
Confidence 64 67899999999999999999998876
No 15
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.63 E-value=1.2e-15 Score=127.23 Aligned_cols=97 Identities=15% Similarity=0.231 Sum_probs=83.1
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-CcEE-E
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKII-K 77 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~~l-~ 77 (194)
|+|+|++||+|+ .||+|++||+.+++++... |...|++|+|+|+|++||||+. |+.++|||+. +..+ .
T Consensus 63 ~~~~~~~l~s~s--~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~------D~~v~lWd~~~~~~~~~ 134 (304)
T 2ynn_A 63 FIARKNWIIVGS--DDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD------DLTVKLWNWENNWALEQ 134 (304)
T ss_dssp EEGGGTEEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEET------TSCEEEEEGGGTTEEEE
T ss_pred EeCCCCEEEEEC--CCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECC------CCeEEEEECCCCcchhh
Confidence 899999999999 7999999999988876653 4467999999999999999995 9999999995 5344 3
Q ss_pred ee--CCCCEEEEEEee-CCCceecccchhHHH
Q psy13461 78 RF--NSPTFCQLRWRP-RPASLLSKEQVDKIK 106 (194)
Q Consensus 78 ~~--~~~~~~~~~wrP-~~~~Lls~~~~~~Ik 106 (194)
.+ ....|..++|+| ++..|+|++.+++|+
T Consensus 135 ~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~ 166 (304)
T 2ynn_A 135 TFEGHEHFVMCVAFNPKDPSTFASGCLDRTVK 166 (304)
T ss_dssp EECCCCSCEEEEEECTTCTTEEEEEETTSEEE
T ss_pred hhcccCCcEEEEEECCCCCCEEEEEeCCCeEE
Confidence 33 367899999999 678899999999886
No 16
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.63 E-value=1.8e-15 Score=128.04 Aligned_cols=97 Identities=9% Similarity=0.068 Sum_probs=84.2
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-CcEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIKR 78 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~~l~~ 78 (194)
|||+|++||+|+ .||+|++||+.++.++.+. |...|++++|+|+|++||||+. |+.++|||+. ++.+..
T Consensus 192 ~~~~~~~l~sg~--~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~------d~~v~iwd~~~~~~~~~ 263 (340)
T 1got_B 192 LAPDTRLFVSGA--CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSD------DATCRLFDLRADQELMT 263 (340)
T ss_dssp ECTTSSEEEEEE--TTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEET------TSCEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEEe--CCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcC------CCcEEEEECCCCcEEEE
Confidence 799999999999 7999999999987776654 4467999999999999999995 9999999995 666665
Q ss_pred eC----CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 79 FN----SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 79 ~~----~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
.. ...+..++|+|++..|++++.++.|+
T Consensus 264 ~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~ 295 (340)
T 1got_B 264 YSHDNIICGITSVSFSKSGRLLLAGYDDFNCN 295 (340)
T ss_dssp ECCTTCCSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EccCCcccceEEEEECCCCCEEEEECCCCeEE
Confidence 53 24699999999999999999998775
No 17
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.63 E-value=2.1e-15 Score=128.19 Aligned_cols=97 Identities=15% Similarity=0.344 Sum_probs=81.4
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCC--eEEee--eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-Cc--
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDF--SVMNA--AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GK-- 74 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~--~~i~~--~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~-- 74 (194)
|||+|++||+|+ .||++++||+++. +++.+ +|...|++++|+|+|++||||+. |+.++|||+. +.
T Consensus 69 ~sp~g~~l~s~s--~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~------D~~v~iwd~~~~~~~ 140 (345)
T 3fm0_A 69 WSPCGNYLASAS--FDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR------DKSVWVWEVDEEDEY 140 (345)
T ss_dssp ECTTSSEEEEEE--TTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEET------TSCEEEEEECTTSCE
T ss_pred ECCCCCEEEEEE--CCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEEC------CCeEEEEECCCCCCe
Confidence 899999999999 7999999998764 34444 34478999999999999999995 9999999995 32
Q ss_pred -EEEee--CCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 75 -IIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 75 -~l~~~--~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
++..+ ....|..++|+|++..|+|++.++.|+
T Consensus 141 ~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~ 175 (345)
T 3fm0_A 141 ECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVK 175 (345)
T ss_dssp EEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEE
T ss_pred EEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEE
Confidence 33333 367899999999999999999998875
No 18
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.62 E-value=1.1e-15 Score=139.75 Aligned_cols=97 Identities=9% Similarity=0.204 Sum_probs=81.9
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeE--Eee-eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec--CcEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSV--MNA-AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ--GKII 76 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~--i~~-~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~--G~~l 76 (194)
|||+|++||+|+ .||+|++||+.+..+ +.. .|...|++|+|||||++||+++. |+.+++|++. |+++
T Consensus 456 ~spdg~~lasgs--~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~------d~~v~~w~~~~~~~~~ 527 (611)
T 1nr0_A 456 LSNDKQFVAVGG--QDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQ------SRKVIPYSVANNFELA 527 (611)
T ss_dssp ECTTSCEEEEEE--TTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEET------TSCEEEEEGGGTTEES
T ss_pred EeCCCCEEEEeC--CCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcC------CCCEEEEEcCCCCcee
Confidence 899999999999 799999999887543 232 34468999999999999999995 9999999996 5544
Q ss_pred Ee--e--CCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 77 KR--F--NSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 77 ~~--~--~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
.. . +...|..++|+|+++.|+|++.|++||
T Consensus 528 ~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~ 561 (611)
T 1nr0_A 528 HTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVI 561 (611)
T ss_dssp CCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eeeeeeecccceeEEEECCCCCEEEEEECCCcEE
Confidence 33 1 467899999999999999999999886
No 19
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.62 E-value=2.7e-15 Score=126.18 Aligned_cols=97 Identities=15% Similarity=0.281 Sum_probs=82.3
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEeee-ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcE-EEe
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKI-IKR 78 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~-~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~-l~~ 78 (194)
.|||+|++||+|+ .||+|++||+.+.+++.+. .+..|.+++|+|+|.+||+++ ++++++|+++... +..
T Consensus 203 ~~sp~g~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~-------~~~i~v~~~~~~~~~~~ 273 (319)
T 3frx_A 203 TASPDGTLIASAG--KDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAAT-------ATGIKVFSLDPQYLVDD 273 (319)
T ss_dssp EECTTSSEEEEEE--TTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEE-------TTEEEEEEETTEEEEEE
T ss_pred EEcCCCCEEEEEe--CCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEc-------CCCcEEEEeCcCeeeec
Confidence 3899999999999 7999999999998887765 357899999999999999987 6789999997543 333
Q ss_pred eC----------CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 79 FN----------SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 79 ~~----------~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
.. ...+..++|+|+|+.|+|++.++.|+
T Consensus 274 ~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~ 311 (319)
T 3frx_A 274 LRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIR 311 (319)
T ss_dssp ECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred cCccccccccCcCcceeEEEECCCCCEEEEeecCceEE
Confidence 32 34688999999999999999998874
No 20
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.62 E-value=3.2e-15 Score=125.70 Aligned_cols=97 Identities=16% Similarity=0.230 Sum_probs=85.8
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEee
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRF 79 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~ 79 (194)
|||+|++||+|+ .||+|++||+.+++++... |...|++++|+|+|++|+||+. |+.++|||+.|+++..+
T Consensus 73 ~s~dg~~l~s~s--~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~------D~~i~vwd~~~~~~~~~ 144 (319)
T 3frx_A 73 LTADGAYALSAS--WDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSR------DKTIKVWTIKGQCLATL 144 (319)
T ss_dssp ECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEET------TSCEEEEETTSCEEEEE
T ss_pred ECCCCCEEEEEe--CCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeC------CCeEEEEECCCCeEEEE
Confidence 899999999999 7999999999998877653 4578999999999999999995 99999999999988877
Q ss_pred C--CCCEEEEEEeeCC------CceecccchhHHH
Q psy13461 80 N--SPTFCQLRWRPRP------ASLLSKEQVDKIK 106 (194)
Q Consensus 80 ~--~~~~~~~~wrP~~------~~Lls~~~~~~Ik 106 (194)
. ...+..+.|.|.+ ..|+|++.++.|+
T Consensus 145 ~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 179 (319)
T 3frx_A 145 LGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVK 179 (319)
T ss_dssp CCCSSCEEEEEECCC------CCEEEEEETTSCEE
T ss_pred eccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEE
Confidence 4 6789999999954 4899999999886
No 21
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.61 E-value=2.8e-15 Score=129.46 Aligned_cols=97 Identities=10% Similarity=0.208 Sum_probs=85.4
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKR 78 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~ 78 (194)
|||+|++||+|+ .||+|++||+.+++++... |...|++++|+|+|++|+||+. |+.++|||+ +|+++..
T Consensus 131 ~s~dg~~l~s~~--~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~------d~~v~iwd~~~~~~~~~ 202 (393)
T 1erj_A 131 FSPDGKFLATGA--EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG------DRTVRIWDLRTGQCSLT 202 (393)
T ss_dssp ECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEEc--CCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecC------CCcEEEEECCCCeeEEE
Confidence 899999999999 7999999999988876553 4467999999999999999995 999999999 4777666
Q ss_pred eC-CCCEEEEEEee-CCCceecccchhHHH
Q psy13461 79 FN-SPTFCQLRWRP-RPASLLSKEQVDKIK 106 (194)
Q Consensus 79 ~~-~~~~~~~~wrP-~~~~Lls~~~~~~Ik 106 (194)
.. ...+..++|+| ++..|++++.++.|+
T Consensus 203 ~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~ 232 (393)
T 1erj_A 203 LSIEDGVTTVAVSPGDGKYIAAGSLDRAVR 232 (393)
T ss_dssp EECSSCEEEEEECSTTCCEEEEEETTSCEE
T ss_pred EEcCCCcEEEEEECCCCCEEEEEcCCCcEE
Confidence 54 67899999999 899999999998875
No 22
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.61 E-value=2.1e-15 Score=131.37 Aligned_cols=93 Identities=12% Similarity=0.285 Sum_probs=81.9
Q ss_pred CCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-CcEEEeeC--
Q psy13461 6 GTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIKRFN-- 80 (194)
Q Consensus 6 G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~~l~~~~-- 80 (194)
|.+|++|+ .||+|++||+.++.++.+. |...|++|+|+|+|++|+||+. |+.++|||+. |+++..+.
T Consensus 308 g~~l~sgs--~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~------D~~i~vwd~~~~~~~~~~~~h 379 (410)
T 1vyh_C 308 GPFLLSGS--RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCAD------DKTLRVWDYKNKRCMKTLNAH 379 (410)
T ss_dssp CCEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEET------TTEEEEECCTTSCCCEEEECC
T ss_pred CCEEEEEe--CCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeC------CCeEEEEECCCCceEEEEcCC
Confidence 78999999 7999999999998877654 4467999999999999999995 9999999994 77777664
Q ss_pred CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 81 SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 81 ~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
...|..++|+|+++.|+|++.|+.||
T Consensus 380 ~~~v~~l~~~~~~~~l~sgs~D~~i~ 405 (410)
T 1vyh_C 380 EHFVTSLDFHKTAPYVVTGSVDQTVK 405 (410)
T ss_dssp SSCEEEEEECSSSSCEEEEETTSEEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEE
Confidence 67899999999999999999998874
No 23
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.61 E-value=1.6e-15 Score=130.00 Aligned_cols=98 Identities=9% Similarity=0.162 Sum_probs=81.8
Q ss_pred CccCCC-CEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCC-CEEEEeecCcccccCCeEEEEeec-CcE
Q psy13461 1 MKCTMG-THIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTG-RYVMSGVSLWKTKADTGYWQWSFQ-GKI 75 (194)
Q Consensus 1 ~fSP~G-~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdG-r~lat~ss~~~~~~D~~~~IW~~~-G~~ 75 (194)
.|||++ .+||+|+ .||.|++||+.+++++.+. +...|++|+|+|+| ++||||+. |+.++|||++ |++
T Consensus 233 ~~sp~~~~~la~g~--~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~------D~~i~iwd~~~~~~ 304 (357)
T 4g56_B 233 TWHPEKDDTFACGD--ETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISE------DCTVAVLDADFSEV 304 (357)
T ss_dssp EECTTSTTEEEEEE--SSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEET------TSCEEEECTTSCEE
T ss_pred hhhhcccceEEEee--cccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeC------CCEEEEEECCCCcE
Confidence 379985 5788888 7999999999987765543 44789999999997 68999985 9999999996 666
Q ss_pred EEeeC-CCCEEEEEEee-CCCceecccchhHHH
Q psy13461 76 IKRFN-SPTFCQLRWRP-RPASLLSKEQVDKIK 106 (194)
Q Consensus 76 l~~~~-~~~~~~~~wrP-~~~~Lls~~~~~~Ik 106 (194)
+.... ...|+.++|+| ++..|+|++.|++|+
T Consensus 305 ~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~ 337 (357)
T 4g56_B 305 FRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVL 337 (357)
T ss_dssp EEECCCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred eEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEE
Confidence 65553 77899999999 789999999999885
No 24
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.61 E-value=2.4e-15 Score=129.94 Aligned_cols=96 Identities=16% Similarity=0.261 Sum_probs=81.9
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeecc--------------------CceEEEEECCCCCEEEEeecCcccc
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH--------------------HQATDVEWDPTGRYVMSGVSLWKTK 61 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h--------------------~~vt~v~WsPdGr~lat~ss~~~~~ 61 (194)
|||+|++||+|+ ++++.+||+.++..+..... ..|++++|+|+|++||||+.
T Consensus 72 fspdg~~la~g~---~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~----- 143 (393)
T 1erj_A 72 FSNDGEYLATGC---NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAE----- 143 (393)
T ss_dssp ECTTSSEEEEEC---BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEET-----
T ss_pred ECCCCCEEEEEc---CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcC-----
Confidence 899999999986 78999999998776654321 13899999999999999995
Q ss_pred cCCeEEEEeec-CcEEEeeC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 62 ADTGYWQWSFQ-GKIIKRFN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 62 ~D~~~~IW~~~-G~~l~~~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
|+.++|||+. |+++..+. ...|+.++|+|++..|+|++.+++|+
T Consensus 144 -d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~ 190 (393)
T 1erj_A 144 -DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVR 190 (393)
T ss_dssp -TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred -CCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEE
Confidence 9999999995 66666654 67899999999999999999999886
No 25
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.61 E-value=3.2e-15 Score=126.51 Aligned_cols=96 Identities=15% Similarity=0.223 Sum_probs=81.9
Q ss_pred cC-CCCEEEEeecCCCCeEEEEECCCC-------eEEe--eeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-
Q psy13461 3 CT-MGTHIVLAELRDTGSLEFVDTGDF-------SVMN--AAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF- 71 (194)
Q Consensus 3 SP-~G~~la~ag~~~dg~l~fwD~~~~-------~~i~--~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~- 71 (194)
+| +|++||+|+ .||+|++||+.+. .... .+|...|++++|+|+|++||||+. |+.++|||+
T Consensus 35 ~~~d~~~l~sgs--~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~------D~~v~lwd~~ 106 (343)
T 2xzm_R 35 ENEDSPVLISGS--RDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSW------DKTLRLWDLR 106 (343)
T ss_dssp TTCCCCEEEEEE--TTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEET------TSEEEEEETT
T ss_pred cCCCCCEEEEEc--CCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcC------CCcEEEEECC
Confidence 55 999999999 7999999998642 2222 345578999999999999999995 999999999
Q ss_pred cCcEEEeeC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 72 QGKIIKRFN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 72 ~G~~l~~~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+|+++..+. ...|..++|+|++..|+|++.+++|+
T Consensus 107 ~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~ 143 (343)
T 2xzm_R 107 TGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIK 143 (343)
T ss_dssp SSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEE
T ss_pred CCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEE
Confidence 588887764 67899999999999999999998886
No 26
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.61 E-value=4.4e-15 Score=122.92 Aligned_cols=97 Identities=15% Similarity=0.239 Sum_probs=86.1
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKR 78 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~ 78 (194)
|||+|++||+|+ .||.|++||+.+++++... +...|++++|+|+|++|+||+. |+.++|||+ +|+++..
T Consensus 73 ~~~~~~~l~s~~--~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~------d~~i~iwd~~~~~~~~~ 144 (312)
T 4ery_A 73 WSSDSNLLVSAS--DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF------DESVRIWDVKTGKCLKT 144 (312)
T ss_dssp ECTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEET------TSCEEEEETTTCCEEEE
T ss_pred EcCCCCEEEEEC--CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeC------CCcEEEEECCCCEEEEE
Confidence 899999999999 7999999999988776653 4467999999999999999995 999999999 4888877
Q ss_pred eC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 79 FN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 79 ~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+. ...+..+.|+|++..|++++.++.|+
T Consensus 145 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 174 (312)
T 4ery_A 145 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 174 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred ecCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Confidence 65 57899999999999999999998875
No 27
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.60 E-value=6.4e-15 Score=124.38 Aligned_cols=97 Identities=13% Similarity=0.199 Sum_probs=81.2
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCC----CeEEee--eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-C-
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGD----FSVMNA--AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-G- 73 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~----~~~i~~--~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G- 73 (194)
|||+|++||+|+ .||+|++||+.. .+++.. .|...|++|+|+|+|++||||+. |+.++||+.. +
T Consensus 115 ~sp~g~~las~s--~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~------D~~i~iW~~~~~~ 186 (330)
T 2hes_X 115 WSNDGYYLATCS--RDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSY------DDTVRIWKDYDDD 186 (330)
T ss_dssp ECTTSCEEEEEE--TTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEET------TSCEEEEEEETTE
T ss_pred ECCCCCEEEEEe--CCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcC------CCeEEEEECCCCC
Confidence 899999999999 799999999842 345443 34467999999999999999995 9999999985 4
Q ss_pred -cEEEeeC--CCCEEEEEEeeC--CCceecccchhHHH
Q psy13461 74 -KIIKRFN--SPTFCQLRWRPR--PASLLSKEQVDKIK 106 (194)
Q Consensus 74 -~~l~~~~--~~~~~~~~wrP~--~~~Lls~~~~~~Ik 106 (194)
.++..+. ...|+.++|+|+ +..|+|++.+++||
T Consensus 187 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~ 224 (330)
T 2hes_X 187 WECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVR 224 (330)
T ss_dssp EEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEE
T ss_pred eeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEE
Confidence 4666554 678999999999 67899999999886
No 28
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.60 E-value=3.4e-15 Score=127.54 Aligned_cols=97 Identities=18% Similarity=0.226 Sum_probs=85.9
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEee--eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNA--AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKR 78 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~--~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~ 78 (194)
|||+|++||+|+ .||.|.+||+.+.+++.. .|...|++++|+|+|++||||+. |+.++|||+ +|+++..
T Consensus 105 ~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~------d~~i~iwd~~~~~~~~~ 176 (420)
T 3vl1_A 105 AKLQMRRFILGT--TEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQ------DMQLKIWSVKDGSNPRT 176 (420)
T ss_dssp ECSSSCEEEEEE--TTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTCCCCEE
T ss_pred EecCCCEEEEEE--CCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeC------CCeEEEEeCCCCcCceE
Confidence 799999999999 799999999998887766 34478999999999999999995 999999999 4777766
Q ss_pred eC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 79 FN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 79 ~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+. ...|..++|+|++..|++++.++.|+
T Consensus 177 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~ 206 (420)
T 3vl1_A 177 LIGHRATVTDIAIIDRGRNVLSASLDGTIR 206 (420)
T ss_dssp EECCSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred EcCCCCcEEEEEEcCCCCEEEEEcCCCcEE
Confidence 53 67899999999999999999998875
No 29
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.60 E-value=3.7e-15 Score=136.21 Aligned_cols=97 Identities=18% Similarity=0.250 Sum_probs=84.9
Q ss_pred ccCCCC-EEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEE
Q psy13461 2 KCTMGT-HIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIK 77 (194)
Q Consensus 2 fSP~G~-~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~ 77 (194)
|||+|. .||+|+ .|++|++||..+++++.+. |...|++|+|+|||++||||+. |+.++|||. +|+++.
T Consensus 155 f~p~~~~~l~s~s--~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~------D~~i~lwd~~~g~~~~ 226 (611)
T 1nr0_A 155 FKPSRPFRIISGS--DDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG------DGTIVLYNGVDGTKTG 226 (611)
T ss_dssp ECSSSSCEEEEEE--TTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEET------TSCEEEEETTTCCEEE
T ss_pred ECCCCCeEEEEEe--CCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEEC------CCcEEEEECCCCcEee
Confidence 899998 599999 7999999999888776653 4467999999999999999995 999999997 588776
Q ss_pred ee---------CCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 78 RF---------NSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 78 ~~---------~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
.+ ....|+.++|+|++..|+|++.+++||
T Consensus 227 ~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~ 264 (611)
T 1nr0_A 227 VFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIK 264 (611)
T ss_dssp ECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred eeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEE
Confidence 55 256799999999999999999999887
No 30
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.60 E-value=7.2e-15 Score=124.30 Aligned_cols=97 Identities=13% Similarity=0.136 Sum_probs=83.8
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEee
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRF 79 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~ 79 (194)
|||+|++||+|+ .||+|++||+.+++++.+. |...|++++|+|+|++||||+. |+.++|||+.+......
T Consensus 84 ~~~~~~~l~s~s--~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~------d~~i~~wd~~~~~~~~~ 155 (343)
T 2xzm_R 84 LSQENCFAISSS--WDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGA------EREIKLWNILGECKFSS 155 (343)
T ss_dssp ECSSTTEEEEEE--TTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEET------TSCEEEEESSSCEEEEC
T ss_pred ECCCCCEEEEEc--CCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcC------CCEEEEEeccCCceeee
Confidence 799999999999 7999999999988776553 4478999999999999999995 99999999988766543
Q ss_pred C-----CCCEEEEEEeeCC----------CceecccchhHHH
Q psy13461 80 N-----SPTFCQLRWRPRP----------ASLLSKEQVDKIK 106 (194)
Q Consensus 80 ~-----~~~~~~~~wrP~~----------~~Lls~~~~~~Ik 106 (194)
. ...+..+.|+|++ +.|++++.++.|+
T Consensus 156 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 197 (343)
T 2xzm_R 156 AEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLK 197 (343)
T ss_dssp CTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEE
T ss_pred ecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEE
Confidence 2 4579999999987 7899999998775
No 31
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.59 E-value=5e-15 Score=127.47 Aligned_cols=97 Identities=14% Similarity=0.186 Sum_probs=78.1
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEeeec-cCceEEEEECCCCCEEEEeecCcccccCCeEEEEe-ecCcEEEe
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWS-FQGKIIKR 78 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~-h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~-~~G~~l~~ 78 (194)
.|||||++||+|+-..|++|++||+.+++++...+ +..|++|+|||||++||+++ ++++++|+ .+|..+..
T Consensus 140 ~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s-------~~~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 140 YISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYIT-------GSSLEVISTVTGSCIAR 212 (365)
T ss_dssp EECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEEC-------SSCEEEEETTTCCEEEE
T ss_pred EEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecc-------ceeEEEEEeccCcceee
Confidence 38999999987652258999999999998877754 46799999999999999998 44555555 47887764
Q ss_pred eC----CCCEEEEEEeeCCCceecccchhH
Q psy13461 79 FN----SPTFCQLRWRPRPASLLSKEQVDK 104 (194)
Q Consensus 79 ~~----~~~~~~~~wrP~~~~Lls~~~~~~ 104 (194)
.. ...|..++|+|++..|++++.++.
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~d~~ 242 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASLKKG 242 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEESSS
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEecCCc
Confidence 32 456999999999999999987763
No 32
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.59 E-value=3.8e-15 Score=127.92 Aligned_cols=96 Identities=18% Similarity=0.259 Sum_probs=79.9
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEe------eeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCc
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMN------AAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGK 74 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~------~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~ 74 (194)
|||++ .|++|+ .||+|++||+.+++++. .+|...|++|+|+|+|++||||+. |+.++|||+ +|+
T Consensus 90 ~s~d~-~l~~~s--~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~------d~~i~iwd~~~~~ 160 (344)
T 4gqb_B 90 WVGER-GILVAS--DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSK------DICIKVWDLAQQV 160 (344)
T ss_dssp EETTT-EEEEEE--TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEET------TSCEEEEETTTTE
T ss_pred EeCCC-eEEEEE--CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeC------CCeEEEEECCCCc
Confidence 89986 466777 69999999998765322 134468999999999999999995 999999999 588
Q ss_pred EEEeeC--CCCEEEEEEeeCCCc-eecccchhHHH
Q psy13461 75 IIKRFN--SPTFCQLRWRPRPAS-LLSKEQVDKIK 106 (194)
Q Consensus 75 ~l~~~~--~~~~~~~~wrP~~~~-Lls~~~~~~Ik 106 (194)
++..+. ...|..++|+|++.. |+|++.+++|+
T Consensus 161 ~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~ 195 (344)
T 4gqb_B 161 VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRIL 195 (344)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred EEEEEcCcCCceEEEEecCCCCCceeeeccccccc
Confidence 888775 778999999999864 68999999886
No 33
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.59 E-value=9.8e-15 Score=120.48 Aligned_cols=96 Identities=13% Similarity=0.267 Sum_probs=80.8
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee-ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCc-EEEee
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGK-IIKRF 79 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~-~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~-~l~~~ 79 (194)
|||+|++||+|+ .||+|++||+.+.+.+... .+..|+.++|+|+|.+++++. |+.++|||+.+. ++...
T Consensus 223 ~s~~~~~l~s~s--~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-------d~~i~iwd~~~~~~~~~~ 293 (340)
T 4aow_A 223 VSPDGSLCASGG--KDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAAT-------GPSIKIWDLEGKIIVDEL 293 (340)
T ss_dssp ECTTSSEEEEEE--TTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEE-------TTEEEEEETTTTEEEEEE
T ss_pred ECCCCCEEEEEe--CCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccC-------CCEEEEEECCCCeEEEec
Confidence 899999999999 7999999999998887765 457899999999998776554 899999999754 33332
Q ss_pred C-----------CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 80 N-----------SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 80 ~-----------~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
. ...|..++|+|+++.|+|++.|+.|+
T Consensus 294 ~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~ 331 (340)
T 4aow_A 294 KQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVR 331 (340)
T ss_dssp CCC-------CCCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred cccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 1 45799999999999999999998874
No 34
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.59 E-value=2.6e-15 Score=139.27 Aligned_cols=94 Identities=10% Similarity=0.215 Sum_probs=77.5
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEeee-ccC-----ceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCc
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA-EHH-----QATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGK 74 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~-~h~-----~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~ 74 (194)
.|||+|++||+++ .||+|.+||.++ ++... ++. .+.+++|||||++||+|+. |+.++|||+++.
T Consensus 92 awSPdG~~LAs~s--~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~------DGtVkIWd~~~~ 161 (588)
T 2j04_A 92 KPSPIDDWMAVLS--NNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNE------DGELQFFSIRKN 161 (588)
T ss_dssp EECSSSSCEEEEE--TTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEET------TSEEEEEECCCC
T ss_pred EECCCCCEEEEEe--CCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcC------CCEEEEEECCCC
Confidence 4899999999999 799999999765 43332 332 4999999999999999995 999999999755
Q ss_pred E--------EEeeC------CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 75 I--------IKRFN------SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 75 ~--------l~~~~------~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
. +..+. ...|.+++|+|+| |++++.++.||
T Consensus 162 ~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVr 205 (588)
T 2j04_A 162 SENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVF 205 (588)
T ss_dssp TTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEE
T ss_pred ccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEE
Confidence 2 34431 3589999999999 88888888886
No 35
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.58 E-value=7.5e-15 Score=122.03 Aligned_cols=98 Identities=15% Similarity=0.323 Sum_probs=80.2
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCC--CeEEee--eccCceEEEEECCC--CCEEEEeecCcccccCCeEEEEeec-C
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGD--FSVMNA--AEHHQATDVEWDPT--GRYVMSGVSLWKTKADTGYWQWSFQ-G 73 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~--~~~i~~--~~h~~vt~v~WsPd--Gr~lat~ss~~~~~~D~~~~IW~~~-G 73 (194)
.|||+|++||+|+ .||+|++||+.+ .+++.+ +|...|++|+|+|+ |++||||+. |+.++|||+. |
T Consensus 16 ~~s~~g~~las~s--~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~------D~~v~iWd~~~~ 87 (297)
T 2pm7_B 16 VMDYYGKRMATCS--SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY------DGKVMIWKEENG 87 (297)
T ss_dssp EECTTSSEEEEEE--TTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET------TTEEEEEEBSSS
T ss_pred EECCCCCEEEEEe--CCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcC------CCEEEEEEcCCC
Confidence 3899999999999 799999999864 334333 45578999999974 999999995 9999999995 4
Q ss_pred c--EEEee--CCCCEEEEEEeeC--CCceecccchhHHH
Q psy13461 74 K--IIKRF--NSPTFCQLRWRPR--PASLLSKEQVDKIK 106 (194)
Q Consensus 74 ~--~l~~~--~~~~~~~~~wrP~--~~~Lls~~~~~~Ik 106 (194)
+ .+... ....|..++|+|+ ++.|++++.++.|+
T Consensus 88 ~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~ 126 (297)
T 2pm7_B 88 RWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVS 126 (297)
T ss_dssp CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred ceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEE
Confidence 3 33333 3678999999998 88999999998876
No 36
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.57 E-value=1.3e-14 Score=120.31 Aligned_cols=94 Identities=11% Similarity=0.143 Sum_probs=83.0
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEE
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIK 77 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~ 77 (194)
.|||+|++||+|+ .||.|.+||+.+++.+... +...|++++|+|+|++||+++. |+.++|||+ .|+++.
T Consensus 39 ~~s~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~ 110 (369)
T 3zwl_B 39 KYNKEGDLLFSCS--KDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSA------DYSIKLWDVSNGQCVA 110 (369)
T ss_dssp EECTTSCEEEEEE--SSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET------TTEEEEEETTTCCEEE
T ss_pred EEcCCCCEEEEEe--CCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeC------CCeEEEEECCCCcEEE
Confidence 3899999999999 7999999999988877654 4478999999999999999995 999999999 477777
Q ss_pred eeC-CCCEEEEEEeeCCCceecccch
Q psy13461 78 RFN-SPTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 78 ~~~-~~~~~~~~wrP~~~~Lls~~~~ 102 (194)
... ...+..+.|+|++..|++++.+
T Consensus 111 ~~~~~~~v~~~~~~~~~~~l~~~~~~ 136 (369)
T 3zwl_B 111 TWKSPVPVKRVEFSPCGNYFLAILDN 136 (369)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEECC
T ss_pred EeecCCCeEEEEEccCCCEEEEecCC
Confidence 765 7789999999999999998876
No 37
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.57 E-value=2.9e-15 Score=144.23 Aligned_cols=97 Identities=7% Similarity=0.082 Sum_probs=80.4
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeE-----Eee--------eccCceEEEEECCCCCEEEEeecCcccccCCeEE
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSV-----MNA--------AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYW 67 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~-----i~~--------~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~ 67 (194)
.|||+|++||+|+ .||+|+|||+.++.+ +.. +|...|++|+|||||++||+|+. |++++
T Consensus 442 ~~spdg~~laSgs--~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~------DgtV~ 513 (902)
T 2oaj_A 442 LPAEYGTAFITGH--SNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIE------TGDVV 513 (902)
T ss_dssp CCCSEEEEEEEEE--TTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEET------TSCEE
T ss_pred cccccCcEEEEec--CCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEec------CcEEE
Confidence 3899999999999 799999999986532 110 34468999999999999999995 99999
Q ss_pred EEeecCc----------------------------------------------EEEee--CCCCEEEEEEeeCCCceecc
Q psy13461 68 QWSFQGK----------------------------------------------IIKRF--NSPTFCQLRWRPRPASLLSK 99 (194)
Q Consensus 68 IW~~~G~----------------------------------------------~l~~~--~~~~~~~~~wrP~~~~Lls~ 99 (194)
||++.+. ++..+ +...|+.++|+|+| .|+++
T Consensus 514 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsg 592 (902)
T 2oaj_A 514 LFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIA 592 (902)
T ss_dssp EEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEE
T ss_pred EEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEE
Confidence 9999633 24444 36789999999999 99999
Q ss_pred cchhHHH
Q psy13461 100 EQVDKIK 106 (194)
Q Consensus 100 ~~~~~Ik 106 (194)
+.+++|+
T Consensus 593 s~D~tv~ 599 (902)
T 2oaj_A 593 YAAGSLM 599 (902)
T ss_dssp ETTSEEE
T ss_pred eCCCcEE
Confidence 9999876
No 38
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.57 E-value=1.7e-14 Score=123.22 Aligned_cols=97 Identities=16% Similarity=0.289 Sum_probs=85.5
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECC--CCCEEEEeecCcccccCCeEEEEee-cCcEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDP--TGRYVMSGVSLWKTKADTGYWQWSF-QGKII 76 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsP--dGr~lat~ss~~~~~~D~~~~IW~~-~G~~l 76 (194)
|+|+|++|++|+ .||+|++||+.+++++.+. |...|++++|+| +|.+|+||+. |+.++|||+ +|+++
T Consensus 162 ~~~~~~~l~t~s--~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~------Dg~v~~wd~~~~~~~ 233 (354)
T 2pbi_B 162 FTNSDMQILTAS--GDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGC------DKKAMVWDMRSGQCV 233 (354)
T ss_dssp ECSSSSEEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEET------TSCEEEEETTTCCEE
T ss_pred EeCCCCEEEEEe--CCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeC------CCeEEEEECCCCcEE
Confidence 799999999999 7999999999998877654 446799999987 5899999995 999999999 58888
Q ss_pred EeeC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 77 KRFN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 77 ~~~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
..+. ...|..++|+|++..|+|++.+++||
T Consensus 234 ~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~ 265 (354)
T 2pbi_B 234 QAFETHESDVNSVRYYPSGDAFASGSDDATCR 265 (354)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEecCCCCCeEEEEEeCCCCEEEEEeCCCeEE
Confidence 7764 67899999999999999999999886
No 39
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.57 E-value=1.9e-14 Score=117.32 Aligned_cols=97 Identities=12% Similarity=0.241 Sum_probs=81.6
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCC----eEEee--eccCceEEEEECC--CCCEEEEeecCcccccCCeEEEEeecC
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDF----SVMNA--AEHHQATDVEWDP--TGRYVMSGVSLWKTKADTGYWQWSFQG 73 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~----~~i~~--~~h~~vt~v~WsP--dGr~lat~ss~~~~~~D~~~~IW~~~G 73 (194)
|||+|++||+|+ .||+|++||+.+. +++.. .+...|++++|+| +|++|++|+. |+.++|||+..
T Consensus 19 ~~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~------dg~v~vwd~~~ 90 (351)
T 3f3f_A 19 YDFYGRHVATCS--SDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASY------DKTVKLWEEDP 90 (351)
T ss_dssp ECSSSSEEEEEE--TTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEET------TSCEEEEEECT
T ss_pred EcCCCCEEEEee--CCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcC------CCeEEEEecCC
Confidence 899999999999 7999999998864 34333 3447899999999 6999999995 99999999964
Q ss_pred ----------cEEEeeC--CCCEEEEEEeeC--CCceecccchhHHH
Q psy13461 74 ----------KIIKRFN--SPTFCQLRWRPR--PASLLSKEQVDKIK 106 (194)
Q Consensus 74 ----------~~l~~~~--~~~~~~~~wrP~--~~~Lls~~~~~~Ik 106 (194)
+.+.... ...+..++|+|+ +..|++++.++.|+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~ 137 (351)
T 3f3f_A 91 DQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILR 137 (351)
T ss_dssp TSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEE
T ss_pred CcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEE
Confidence 4455543 678999999999 99999999998775
No 40
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.56 E-value=1.3e-14 Score=122.74 Aligned_cols=97 Identities=15% Similarity=0.231 Sum_probs=84.5
Q ss_pred ccCCCCEEEEeecCCC---CeEEEEECCCCeEEeee---------------ccCceEEEEECCCCCEEEEeecCcccccC
Q psy13461 2 KCTMGTHIVLAELRDT---GSLEFVDTGDFSVMNAA---------------EHHQATDVEWDPTGRYVMSGVSLWKTKAD 63 (194)
Q Consensus 2 fSP~G~~la~ag~~~d---g~l~fwD~~~~~~i~~~---------------~h~~vt~v~WsPdGr~lat~ss~~~~~~D 63 (194)
|||+|++|++|+ .| |.|.+||+.+++.+... +...|++++|+|+|++||+++. |
T Consensus 241 ~~~~~~~l~~~~--~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d 312 (397)
T 1sq9_A 241 FSPQGSLLAIAH--DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW------D 312 (397)
T ss_dssp ECSSTTEEEEEE--EETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET------T
T ss_pred ECCCCCEEEEEe--cCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC------C
Confidence 799999999999 68 99999999987766553 3467999999999999999995 9
Q ss_pred CeEEEEee-cCcEEEeeC-----------------------CCCEEEEEEeeCC----------CceecccchhHHH
Q psy13461 64 TGYWQWSF-QGKIIKRFN-----------------------SPTFCQLRWRPRP----------ASLLSKEQVDKIK 106 (194)
Q Consensus 64 ~~~~IW~~-~G~~l~~~~-----------------------~~~~~~~~wrP~~----------~~Lls~~~~~~Ik 106 (194)
+.++|||+ .|+++..+. ...|..++|+|++ +.|+|++.++.|+
T Consensus 313 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~ 389 (397)
T 1sq9_A 313 GKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIR 389 (397)
T ss_dssp SEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEE
T ss_pred CeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEE
Confidence 99999999 577777765 6779999999998 7999999998774
No 41
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.56 E-value=1.6e-14 Score=128.37 Aligned_cols=96 Identities=24% Similarity=0.345 Sum_probs=85.0
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee---ccCceEEEEECC----------CCCEEEEeecCcccccCCeEEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA---EHHQATDVEWDP----------TGRYVMSGVSLWKTKADTGYWQ 68 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~---~h~~vt~v~WsP----------dGr~lat~ss~~~~~~D~~~~I 68 (194)
|||+|++||+|+ .||.|.+||+.+++++... |...|++++|+| +|++||+|+. |+.++|
T Consensus 496 ~s~~g~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~------dg~i~i 567 (615)
T 1pgu_A 496 ISPSETYIAAGD--VMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSL------DTNIFI 567 (615)
T ss_dssp ECTTSSEEEEEE--TTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEET------TSCEEE
T ss_pred ECCCCCEEEEcC--CCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcC------CCcEEE
Confidence 899999999999 7999999999998887764 346899999999 9999999995 999999
Q ss_pred Eeec-C-cEEEeeC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 69 WSFQ-G-KIIKRFN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 69 W~~~-G-~~l~~~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
||+. | +++..+. ...|..++|+|+++ |+|++.++.|+
T Consensus 568 w~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~ 608 (615)
T 1pgu_A 568 YSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIK 608 (615)
T ss_dssp EESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEE
T ss_pred EECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEE
Confidence 9995 4 6777664 67899999999999 99999998764
No 42
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.56 E-value=4.8e-15 Score=130.17 Aligned_cols=103 Identities=9% Similarity=0.106 Sum_probs=78.9
Q ss_pred ccC---CCCEEEEeecCCCCeEEEEECCCCeEEeeec--c---CceEEEEECCCCCEEEEeec------------C----
Q psy13461 2 KCT---MGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--H---HQATDVEWDPTGRYVMSGVS------------L---- 57 (194)
Q Consensus 2 fSP---~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~--h---~~vt~v~WsPdGr~lat~ss------------~---- 57 (194)
||| +|.+||+|+ .|++|++||+.+++++.+.+ | ..+.+++|||||+++++++. .
T Consensus 186 fs~~~g~~~~LaSgS--~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIk 263 (356)
T 2w18_A 186 FAEVQGMQEALLGTT--IMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLI 263 (356)
T ss_dssp EEEEETSTTEEEEEE--TTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEE
T ss_pred eeccCCCCceEEEec--CCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEE
Confidence 556 557788999 79999999999998877653 2 35788899999998865431 0
Q ss_pred -c-----------------cc-----------------ccCCeEEEEee-cCcEEEeeC--CCCEE-EEEEeeCCCceec
Q psy13461 58 -W-----------------KT-----------------KADTGYWQWSF-QGKIIKRFN--SPTFC-QLRWRPRPASLLS 98 (194)
Q Consensus 58 -~-----------------~~-----------------~~D~~~~IW~~-~G~~l~~~~--~~~~~-~~~wrP~~~~Lls 98 (194)
| .| ..|++++|||+ +|+++.++. .+.+. .++|+|+|+.|+|
T Consensus 264 lWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaS 343 (356)
T 2w18_A 264 VINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLA 343 (356)
T ss_dssp EEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEE
T ss_pred EEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEE
Confidence 1 01 14899999999 599998875 44444 5899999999999
Q ss_pred ccchhHHH
Q psy13461 99 KEQVDKIK 106 (194)
Q Consensus 99 ~~~~~~Ik 106 (194)
++.|++||
T Consensus 344 GS~D~TIk 351 (356)
T 2w18_A 344 GQKDGNIF 351 (356)
T ss_dssp ECTTSCEE
T ss_pred EECCCcEE
Confidence 99999885
No 43
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.55 E-value=9.7e-15 Score=122.56 Aligned_cols=97 Identities=15% Similarity=0.236 Sum_probs=80.5
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCe--EEee--eccCceEEEEECC--CCCEEEEeecCcccccCCeEEEEeec-Cc
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFS--VMNA--AEHHQATDVEWDP--TGRYVMSGVSLWKTKADTGYWQWSFQ-GK 74 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~--~i~~--~~h~~vt~v~WsP--dGr~lat~ss~~~~~~D~~~~IW~~~-G~ 74 (194)
|||+|++||+|+ .||+|++||+.++. ++.+ +|...|++|+|+| +|++||||+. |+.++|||+. |.
T Consensus 21 ~s~~g~~lasgs--~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~------D~~v~iWd~~~~~ 92 (316)
T 3bg1_A 21 MDYYGTRLATCS--SDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSY------DRKVIIWREENGT 92 (316)
T ss_dssp ECGGGCEEEEEE--TTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEET------TSCEEEECCSSSC
T ss_pred EcCCCCEEEEEe--CCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEEC------CCEEEEEECCCCc
Confidence 899999999999 79999999988653 3333 3457899999987 4999999995 9999999995 53
Q ss_pred --EEEee--CCCCEEEEEEeeC--CCceecccchhHHH
Q psy13461 75 --IIKRF--NSPTFCQLRWRPR--PASLLSKEQVDKIK 106 (194)
Q Consensus 75 --~l~~~--~~~~~~~~~wrP~--~~~Lls~~~~~~Ik 106 (194)
.+..+ ....|..++|+|+ +..|+|++.++.|+
T Consensus 93 ~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~ 130 (316)
T 3bg1_A 93 WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAIS 130 (316)
T ss_dssp CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEE
T ss_pred ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEE
Confidence 44444 3668999999998 78999999998886
No 44
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.55 E-value=1.5e-14 Score=122.08 Aligned_cols=96 Identities=8% Similarity=0.045 Sum_probs=80.2
Q ss_pred ccC--CCCEEEEeecCCCCeEEEEECCCCeEEeee--cc-CceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcE
Q psy13461 2 KCT--MGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKI 75 (194)
Q Consensus 2 fSP--~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h-~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~ 75 (194)
|+| +|++||+|+ .||+|++||+.+++++... ++ ..+++++|+|+|++||+|+. |+.++|||+ +|++
T Consensus 133 ~~~~~~~~~l~s~s--~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~------dg~i~iwd~~~~~~ 204 (343)
T 3lrv_A 133 GHNEVNTEYFIWAD--NRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSP------DGILDVYNLSSPDQ 204 (343)
T ss_dssp CCC---CCEEEEEE--TTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECT------TSCEEEEESSCTTS
T ss_pred cCCCCCCCEEEEEe--CCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcC------CCEEEEEECCCCCC
Confidence 799 999999999 7999999999988775432 33 47999999999999999985 999999999 4666
Q ss_pred E-Eee---CCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 76 I-KRF---NSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 76 l-~~~---~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+ ..+ +...|..++|+|++..|++++++ .|+
T Consensus 205 ~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~ 238 (343)
T 3lrv_A 205 ASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVV 238 (343)
T ss_dssp CCEECCCCTTSCEEEEEECTTSSEEEEEESS-BEE
T ss_pred CccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEE
Confidence 5 444 35789999999999999999955 664
No 45
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.55 E-value=2.4e-14 Score=122.90 Aligned_cols=97 Identities=14% Similarity=0.278 Sum_probs=82.9
Q ss_pred ccC-CCCEEEEeecCCCCeEEEEECCCC-------eEEe--eeccCceEEEEECCCC-CEEEEeecCcccccCCeEEEEe
Q psy13461 2 KCT-MGTHIVLAELRDTGSLEFVDTGDF-------SVMN--AAEHHQATDVEWDPTG-RYVMSGVSLWKTKADTGYWQWS 70 (194)
Q Consensus 2 fSP-~G~~la~ag~~~dg~l~fwD~~~~-------~~i~--~~~h~~vt~v~WsPdG-r~lat~ss~~~~~~D~~~~IW~ 70 (194)
||| +|++||+|+ .||+|.+||+.++ +.+. .+|...|++++|+|+| ++|+||+. |+.++|||
T Consensus 89 ~~p~~~~~l~s~s--~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~------dg~i~iwd 160 (402)
T 2aq5_A 89 WCPHNDNVIASGS--EDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC------DNVILVWD 160 (402)
T ss_dssp ECTTCTTEEEEEE--TTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET------TSCEEEEE
T ss_pred eCCCCCCEEEEEe--CCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC------CCEEEEEE
Confidence 899 999999999 7999999998875 2222 3355789999999999 69999985 99999999
Q ss_pred e-cCcEEEee----CCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 71 F-QGKIIKRF----NSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 71 ~-~G~~l~~~----~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+ .|+.+..+ ....+..++|+|++..|++++.++.|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 201 (402)
T 2aq5_A 161 VGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVR 201 (402)
T ss_dssp TTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred CCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEE
Confidence 9 57777777 367899999999999999999998775
No 46
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.54 E-value=3.9e-15 Score=125.63 Aligned_cols=97 Identities=13% Similarity=0.197 Sum_probs=79.0
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCC--eEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-Cc--
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDF--SVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GK-- 74 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~--~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~-- 74 (194)
|||+|++||+|+ .||.|.+||+.+. +++... |...|++++|+|+|++|||++. |+.++|||+. |.
T Consensus 19 ~s~~g~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~------d~~v~vwd~~~~~~~ 90 (377)
T 3dwl_C 19 FNSQRTEFVTTT--ATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQ------DRNAYVYEKRPDGTW 90 (377)
T ss_dssp ECSSSSEEECCC--SSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEET------TSSEEEC------CC
T ss_pred ECCCCCEEEEec--CCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeC------CCeEEEEEcCCCCce
Confidence 899999999998 7999999999876 555443 4478999999999999999995 9999999995 44
Q ss_pred -EEEee--CCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 75 -IIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 75 -~l~~~--~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
.+... ....+..++|+|++..|++++.++.|+
T Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 125 (377)
T 3dwl_C 91 KQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVIS 125 (377)
T ss_dssp CCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEE
T ss_pred eeeeEecccCCceEEEEECCCCCEEEEEecCCeEE
Confidence 34433 367899999999999999999998775
No 47
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.54 E-value=7.7e-15 Score=125.48 Aligned_cols=98 Identities=10% Similarity=0.191 Sum_probs=78.5
Q ss_pred CccCCCCEEEEeecCCCCe-EEEEECCCCeEEeeec---c-CceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-Cc
Q psy13461 1 MKCTMGTHIVLAELRDTGS-LEFVDTGDFSVMNAAE---H-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GK 74 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~-l~fwD~~~~~~i~~~~---h-~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~ 74 (194)
.|||+|++||+|+ .||+ |++||+.+++++.+.. | ..|++++|||+|++||+++. |+.++|||+. +.
T Consensus 202 ~~s~~g~~l~s~s--~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~------d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 202 RLNRKSDMVATCS--QDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSD------KWTLHVFEIFNDQ 273 (355)
T ss_dssp EECTTSSEEEEEE--TTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEET------TCEEEEEESSCCS
T ss_pred EECCCCCEEEEEe--CCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEEC------CCEEEEEEccCCC
Confidence 3899999999999 7998 9999999888776543 4 67999999999999999995 9999999984 22
Q ss_pred EEE----------------------eeC---CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 75 IIK----------------------RFN---SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 75 ~l~----------------------~~~---~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
... .++ ......++|+|++..|++++.++.++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~ 330 (355)
T 3vu4_A 274 DNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIE 330 (355)
T ss_dssp CCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEE
T ss_pred CcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEE
Confidence 100 011 11236789999999999999888664
No 48
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.54 E-value=1.8e-14 Score=133.12 Aligned_cols=98 Identities=10% Similarity=0.138 Sum_probs=86.4
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEE
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIK 77 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~ 77 (194)
.|||+|++||+|+ .+|.|.+||+.+++.+.+. +...|++++|+|+|++||+|+. |+.++|||+ +|+.+.
T Consensus 20 ~~sp~~~~la~~~--~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------dg~i~vw~~~~~~~~~ 91 (814)
T 3mkq_A 20 DFHPTEPWVLTTL--YSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD------DFRIRVFNYNTGEKVV 91 (814)
T ss_dssp EECSSSSEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET------TSEEEEEETTTCCEEE
T ss_pred EECCCCCEEEEEe--CCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC------CCeEEEEECCCCcEEE
Confidence 3899999999999 7999999999988776654 4478999999999999999995 999999998 588777
Q ss_pred eeC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 78 RFN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 78 ~~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
.+. ...+..++|+|+++.|++++.++.|+
T Consensus 92 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 122 (814)
T 3mkq_A 92 DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVK 122 (814)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred EEecCCCCEEEEEEeCCCCEEEEEcCCCEEE
Confidence 664 67899999999999999999998775
No 49
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.54 E-value=2.8e-14 Score=120.45 Aligned_cols=97 Identities=12% Similarity=0.315 Sum_probs=80.8
Q ss_pred ccCCCC-EEEEeecCCCCeEEEEEC----CCCe------EEeee-c----------c-CceEEEEECCCCCEEEEeecCc
Q psy13461 2 KCTMGT-HIVLAELRDTGSLEFVDT----GDFS------VMNAA-E----------H-HQATDVEWDPTGRYVMSGVSLW 58 (194)
Q Consensus 2 fSP~G~-~la~ag~~~dg~l~fwD~----~~~~------~i~~~-~----------h-~~vt~v~WsPdGr~lat~ss~~ 58 (194)
|||+|+ +||+|+ .||.|.+||+ .+++ ..... + | ..|++++|+|+|++||+++.
T Consensus 53 ~s~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-- 128 (425)
T 1r5m_A 53 WNPLDESILAYGE--KNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVE-- 128 (425)
T ss_dssp ECSSCTTEEEEEE--TBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEET--
T ss_pred ECCCCCcEEEEec--CCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeC--
Confidence 899999 999999 7999999999 7766 22221 1 3 37999999999999999995
Q ss_pred ccccCCeEEEEeecCcEEEeeC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 59 KTKADTGYWQWSFQGKIIKRFN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 59 ~~~~D~~~~IW~~~G~~l~~~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
|+.++|||.+|+.+..+. ...+..++|+|++..|++++.++.|+
T Consensus 129 ----dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 174 (425)
T 1r5m_A 129 ----NGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTI 174 (425)
T ss_dssp ----TSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEE
T ss_pred ----CCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEE
Confidence 899999999899888775 67899999999999999999988775
No 50
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.54 E-value=1.6e-14 Score=121.93 Aligned_cols=97 Identities=8% Similarity=0.137 Sum_probs=79.6
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCe---EEee--e-ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec---
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFS---VMNA--A-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ--- 72 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~---~i~~--~-~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~--- 72 (194)
|||+|++||+|+ .||.|.+||+.+.+ ++.. . +...|++++|+|+|++||+++. |+.++|||+.
T Consensus 108 ~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~ 179 (377)
T 3dwl_C 108 WSPNEDKFAVGS--GARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA------DRKAYVLSAYVRD 179 (377)
T ss_dssp CCTTSSCCEEEE--SSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES------SSCEEEEEECCSS
T ss_pred ECCCCCEEEEEe--cCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC------CCEEEEEEEEecc
Confidence 899999999999 79999999998754 2222 2 4478999999999999999995 9999999984
Q ss_pred ----------------CcEEEeeC-CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 73 ----------------GKIIKRFN-SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 73 ----------------G~~l~~~~-~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
|+++..+. ...+..++|+|+++.|++++.++.|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~ 230 (377)
T 3dwl_C 180 VDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVT 230 (377)
T ss_dssp CC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC
T ss_pred cCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEE
Confidence 66666553 56799999999999999999998886
No 51
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.54 E-value=5.5e-14 Score=116.43 Aligned_cols=98 Identities=13% Similarity=0.084 Sum_probs=85.5
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEeeec-cCceEEEEECCCCCEEEEeecCcccccCC--------------e
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADT--------------G 65 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~-h~~vt~v~WsPdGr~lat~ss~~~~~~D~--------------~ 65 (194)
.|||+|++|++++ .||.|.+||+.+++++.... ...++.++|+|+|+++++++. ++ .
T Consensus 225 ~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~ 296 (369)
T 3zwl_B 225 QFSPDLTYFITSS--RDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGG------QEAKDVTTTSANEGKFE 296 (369)
T ss_dssp EECTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEEC------CC-------------CE
T ss_pred EECCCCCEEEEec--CCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeec------CCCceEEEEecCCCcce
Confidence 3899999999999 79999999999888776653 468999999999999999986 44 7
Q ss_pred EEEEee-cCcEEEeeC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 66 YWQWSF-QGKIIKRFN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 66 ~~IW~~-~G~~l~~~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+++||. .|+.+..+. ...|..++|+|+++.|+|++.++.|+
T Consensus 297 i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~ 340 (369)
T 3zwl_B 297 ARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIR 340 (369)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred eEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEE
Confidence 999999 577777664 67899999999999999999999886
No 52
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.54 E-value=4.5e-14 Score=115.80 Aligned_cols=97 Identities=11% Similarity=0.175 Sum_probs=83.3
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee-ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-CcEEEee
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIKRF 79 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~-~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~~l~~~ 79 (194)
|||+|++|++++ .+|.|.+||+.+.+..... +...|++++|+|+|++|++++. |+.+++|++. |+.+...
T Consensus 232 ~s~~~~~l~~~~--~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~~~~~~~~~~~~~~ 303 (337)
T 1gxr_A 232 YCPTGEWLAVGM--ESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGK------DNLLNAWRTPYGASIFQS 303 (337)
T ss_dssp ECTTSSEEEEEE--TTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTCCEEEEE
T ss_pred ECCCCCEEEEEc--CCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecC------CCcEEEEECCCCeEEEEe
Confidence 799999999999 7999999999987665443 3468999999999999999995 9999999994 7776554
Q ss_pred -CCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 80 -NSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 80 -~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
....+..++|+|+++.|++++.++.|+
T Consensus 304 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 331 (337)
T 1gxr_A 304 KESSSVLSCDISVDDKYIVTGSGDKKAT 331 (337)
T ss_dssp ECSSCEEEEEECTTSCEEEEEETTSCEE
T ss_pred cCCCcEEEEEECCCCCEEEEecCCCeEE
Confidence 477899999999999999999987663
No 53
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.53 E-value=3.4e-14 Score=117.82 Aligned_cols=97 Identities=10% Similarity=0.200 Sum_probs=84.3
Q ss_pred ccCC----CCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECC-CCCEEEEeecCcccccCCeEEEEeec-C
Q psy13461 2 KCTM----GTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDP-TGRYVMSGVSLWKTKADTGYWQWSFQ-G 73 (194)
Q Consensus 2 fSP~----G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsP-dGr~lat~ss~~~~~~D~~~~IW~~~-G 73 (194)
|||+ |++||+|+ .||.|.+||+.+++.+... +...|++++|+| +|++||+|+. |+.++|||+. |
T Consensus 77 ~~~~~~~~~~~l~~~~--~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~ 148 (366)
T 3k26_A 77 WTYDSNTSHPLLAVAG--SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK------DHALRLWNIQTD 148 (366)
T ss_dssp EEECTTTCCEEEEEEE--TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET------TSCEEEEETTTT
T ss_pred eccCCCCCCCEEEEec--CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC------CCeEEEEEeecC
Confidence 6788 77999999 7999999999988776654 447899999999 9999999995 9999999995 7
Q ss_pred cEEEee-----CCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 74 KIIKRF-----NSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 74 ~~l~~~-----~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+.+... ....+..++|+|++..|++++.++.|+
T Consensus 149 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 186 (366)
T 3k26_A 149 TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLK 186 (366)
T ss_dssp EEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eEEEEecccccccCceeEEEECCCCCEEEEecCCCCEE
Confidence 777765 367899999999999999999998774
No 54
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.53 E-value=1.2e-14 Score=127.01 Aligned_cols=97 Identities=12% Similarity=0.230 Sum_probs=80.0
Q ss_pred ccC-CCCEEEEeecCCCCeEEEEECCCCe--EEee--eccCceEEEEECC-CCCEEEEeecCcccccCCeEEEEeecCcE
Q psy13461 2 KCT-MGTHIVLAELRDTGSLEFVDTGDFS--VMNA--AEHHQATDVEWDP-TGRYVMSGVSLWKTKADTGYWQWSFQGKI 75 (194)
Q Consensus 2 fSP-~G~~la~ag~~~dg~l~fwD~~~~~--~i~~--~~h~~vt~v~WsP-dGr~lat~ss~~~~~~D~~~~IW~~~G~~ 75 (194)
||| ++++||+|+ .||+|.+||+.+.. .+.. +|...|++|+|+| +|.+|+||+. |+.++|||+.+..
T Consensus 127 ~~P~~~~~lasGs--~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~------D~~v~iwd~~~~~ 198 (435)
T 4e54_B 127 WHPTHPSTVAVGS--KGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSM------EGTTRLQDFKGNI 198 (435)
T ss_dssp ECSSCTTCEEEEE--TTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECS------SSCEEEEETTSCE
T ss_pred EeCCCCCEEEEEe--CCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeC------CCEEEEeeccCCc
Confidence 899 567999999 79999999987543 3332 3557899999999 7999999995 9999999998877
Q ss_pred EEeeC-----CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 76 IKRFN-----SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 76 l~~~~-----~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+.... ...+..++|+|++..|++++.++.|+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~ 234 (435)
T 4e54_B 199 LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVI 234 (435)
T ss_dssp EEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEE
T ss_pred eeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEe
Confidence 65542 33578999999999999999998775
No 55
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.52 E-value=4.5e-14 Score=130.33 Aligned_cols=97 Identities=14% Similarity=0.187 Sum_probs=84.2
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEee--eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEee
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNA--AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRF 79 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~--~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~ 79 (194)
|||+|++|++|+ .||+|++||+.++.++.. +|...|++|+|+|+|++|+||+. |+.++|||..+.+....
T Consensus 438 ~s~~g~~l~sgs--~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~------D~~i~iwd~~~~~~~~~ 509 (694)
T 3dm0_A 438 LSSDGQFALSGS--WDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASR------DRTIKLWNTLGECKYTI 509 (694)
T ss_dssp ECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEET------TSCEEEECTTSCEEEEE
T ss_pred ECCCCCEEEEEe--CCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeC------CCEEEEEECCCCcceee
Confidence 899999999999 799999999998877655 35578999999999999999995 99999999988766554
Q ss_pred C------CCCEEEEEEeeCC--CceecccchhHHH
Q psy13461 80 N------SPTFCQLRWRPRP--ASLLSKEQVDKIK 106 (194)
Q Consensus 80 ~------~~~~~~~~wrP~~--~~Lls~~~~~~Ik 106 (194)
. ...|..+.|+|++ +.|+|++.++.|+
T Consensus 510 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~ 544 (694)
T 3dm0_A 510 SEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 544 (694)
T ss_dssp CSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEE
T ss_pred ccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEE
Confidence 2 4569999999987 5799999999886
No 56
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.52 E-value=4.2e-15 Score=135.64 Aligned_cols=97 Identities=7% Similarity=0.027 Sum_probs=81.4
Q ss_pred ccCCC-CEEEEeecCCCCeEEEEECCCCeEEee--ecc--CceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcE
Q psy13461 2 KCTMG-THIVLAELRDTGSLEFVDTGDFSVMNA--AEH--HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKI 75 (194)
Q Consensus 2 fSP~G-~~la~ag~~~dg~l~fwD~~~~~~i~~--~~h--~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~ 75 (194)
|||+| ++||+|+ .||+|++||+.+++++.+ ++. ..|++|+|+|+|+.||+++. |++++|||+ .|.+
T Consensus 318 ~s~~g~~~laS~S--~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~------d~tv~lwd~~~~~~ 389 (524)
T 2j04_B 318 YSDFEDTVVSTVA--VDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDG------ASSLRAVPSRAAFA 389 (524)
T ss_dssp CCTTSCCEEEEEE--TTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECS------SSEEEEEETTCTTC
T ss_pred cCCCCCeEEEEec--cCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCC------CCcEEEEECccccc
Confidence 78999 8999999 799999999987654332 222 24889999999999999985 899999998 4776
Q ss_pred EEee--CCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 76 IKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 76 l~~~--~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+..+ ....|++++|+|+++.|+|++.|++|+
T Consensus 390 ~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~ 422 (524)
T 2j04_B 390 VHPLVSRETTITAIGVSRLHPMVLAGSADGSLI 422 (524)
T ss_dssp CEEEEECSSCEEEEECCSSCCBCEEEETTTEEE
T ss_pred ceeeecCCCceEEEEeCCCCCeEEEEECCCEEE
Confidence 5554 477899999999999999999999986
No 57
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.52 E-value=9.6e-15 Score=123.31 Aligned_cols=96 Identities=7% Similarity=0.088 Sum_probs=75.2
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEE---eee-ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-CcEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVM---NAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKII 76 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i---~~~-~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~~l 76 (194)
|||+|++||+|+ .||.|++||+.+++.+ ... |...|++|+|+|+|++||+++ |+.++|||+. ++.+
T Consensus 178 ~~pdg~~lasg~--~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-------~~~v~iwd~~~~~~~ 248 (343)
T 3lrv_A 178 LHKDSLLLALYS--PDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-------DQTVVCFDLRKDVGT 248 (343)
T ss_dssp ECTTSCEEEEEC--TTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-------SSBEEEEETTSSTTC
T ss_pred ECCCCCEEEEEc--CCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-------CCeEEEEEcCCCCcc
Confidence 899999999999 7999999999986654 233 457899999999999999999 4599999995 5554
Q ss_pred EeeCC-----CCE--EEEEEeeCCCceecccc-hhHHH
Q psy13461 77 KRFNS-----PTF--CQLRWRPRPASLLSKEQ-VDKIK 106 (194)
Q Consensus 77 ~~~~~-----~~~--~~~~wrP~~~~Lls~~~-~~~Ik 106 (194)
..... ..+ ..++|+|+++.|++++. +..|+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~ 286 (343)
T 3lrv_A 249 LAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLT 286 (343)
T ss_dssp BSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEE
T ss_pred eeecccccccccccceEEEECCCCCEEEEecCCCCcEE
Confidence 43321 223 35999999999999776 66554
No 58
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.52 E-value=4.9e-14 Score=120.44 Aligned_cols=96 Identities=13% Similarity=0.227 Sum_probs=77.8
Q ss_pred ccCCCCEEEEe-ecCCCCeEEEEECCCCe------------------EEeeeccCceEEEEECCCCCEEEEeecCccccc
Q psy13461 2 KCTMGTHIVLA-ELRDTGSLEFVDTGDFS------------------VMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKA 62 (194)
Q Consensus 2 fSP~G~~la~a-g~~~dg~l~fwD~~~~~------------------~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~ 62 (194)
+|| .++|++ |. .+|.|++||+.++. ....+|...|++++|||+|++||||+.
T Consensus 145 ~s~--~~la~~sg~-~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~------ 215 (355)
T 3vu4_A 145 FSN--GLLVYSNEF-NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQ------ 215 (355)
T ss_dssp EET--TEEEEEESS-CTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEET------
T ss_pred EEc--cEEEEeCCC-cCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeC------
Confidence 455 567765 33 69999999998754 222345578999999999999999995
Q ss_pred CCe-EEEEeec-CcEEEeeC----CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 63 DTG-YWQWSFQ-GKIIKRFN----SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 63 D~~-~~IW~~~-G~~l~~~~----~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
|++ ++|||+. |+++..+. ...|+.++|+|++..|+|++.+++|+
T Consensus 216 d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~ 265 (355)
T 3vu4_A 216 DGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLH 265 (355)
T ss_dssp TCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEE
T ss_pred CCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEE
Confidence 998 9999994 88888764 56899999999999999999998875
No 59
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.52 E-value=5.7e-14 Score=114.80 Aligned_cols=95 Identities=16% Similarity=0.174 Sum_probs=75.7
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee---cc-CceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA---EH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKII 76 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~---~h-~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l 76 (194)
|||+| +||+|. |++|++||+.+++++... .| ..|++|+|+|+|++||||+. |+.++||++ +|+++
T Consensus 33 WS~~~-~lAvg~---D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~------Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 33 WSSGN-VLAVAL---DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS------SAEVQLWDVQQQKRL 102 (318)
T ss_dssp ECTTS-EEEEEE---TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET------TSEEEEEETTTTEEE
T ss_pred ECCCC-EEEEEe---CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEEC------CCcEEEeecCCceeE
Confidence 78886 676664 899999999998876543 23 46999999999999999995 999999999 58888
Q ss_pred EeeCCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 77 KRFNSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 77 ~~~~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
............+++++..|++++.++.++
T Consensus 103 ~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~ 132 (318)
T 4ggc_A 103 RNMTSHSARVGSLSWNSYILSSGSRSGHIH 132 (318)
T ss_dssp EEEECCSSCEEEEEEETTEEEEEETTSEEE
T ss_pred EEecCccceEEEeecCCCEEEEEecCCceE
Confidence 777644444456777788999999887665
No 60
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.52 E-value=5.6e-14 Score=116.38 Aligned_cols=97 Identities=13% Similarity=0.266 Sum_probs=80.7
Q ss_pred ccCC---CCEEEEeecCCCCeEEEEECCC-CeEE-e--eeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-C
Q psy13461 2 KCTM---GTHIVLAELRDTGSLEFVDTGD-FSVM-N--AAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-G 73 (194)
Q Consensus 2 fSP~---G~~la~ag~~~dg~l~fwD~~~-~~~i-~--~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G 73 (194)
|||+ |++||+|+ .||.|++||+.+ ...+ . ..|...|++++|+|+|++||+++. |+.++|||+. |
T Consensus 47 ~~~~~~~g~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~------dg~v~iwd~~~~ 118 (368)
T 3mmy_A 47 FSPPTLPGNFLIAGS--WANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC------DKTAKMWDLSSN 118 (368)
T ss_dssp ECCTTSSSEEEEEEE--TTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTT
T ss_pred EcCCCCCceEEEEEC--CCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC------CCcEEEEEcCCC
Confidence 8999 69999999 799999999986 4433 2 334578999999999999999995 9999999995 5
Q ss_pred cEEEee-CCCCEEEEEE--eeCCCceecccchhHHH
Q psy13461 74 KIIKRF-NSPTFCQLRW--RPRPASLLSKEQVDKIK 106 (194)
Q Consensus 74 ~~l~~~-~~~~~~~~~w--rP~~~~Lls~~~~~~Ik 106 (194)
+++... ....+..+.| +|++..|++++.++.|+
T Consensus 119 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~ 154 (368)
T 3mmy_A 119 QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLK 154 (368)
T ss_dssp EEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEE
T ss_pred CceeeccccCceEEEEEEeCCCCCEEEEccCCCcEE
Confidence 555433 3778999999 88888899999998775
No 61
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.52 E-value=8.1e-14 Score=115.74 Aligned_cols=97 Identities=16% Similarity=0.312 Sum_probs=79.3
Q ss_pred ccCC--CCEEEEeecCCCCeEEEEECCCCe----EEeeeccCceEEEEECCC-------------CCEEEEeecCccccc
Q psy13461 2 KCTM--GTHIVLAELRDTGSLEFVDTGDFS----VMNAAEHHQATDVEWDPT-------------GRYVMSGVSLWKTKA 62 (194)
Q Consensus 2 fSP~--G~~la~ag~~~dg~l~fwD~~~~~----~i~~~~h~~vt~v~WsPd-------------Gr~lat~ss~~~~~~ 62 (194)
|||+ |.+||+|+ .||+|++||+.+.. .....|...|++++|+|+ |++||||+.
T Consensus 107 ~~p~~~g~~l~s~s--~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~------ 178 (297)
T 2pm7_B 107 WAPHEYGPMLLVAS--SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA------ 178 (297)
T ss_dssp ECCGGGCSEEEEEE--TTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEET------
T ss_pred eCcCCCCcEEEEEE--CCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcC------
Confidence 7897 99999999 79999999987542 223345578999999997 689999995
Q ss_pred CCeEEEEeec-Cc----EEEeeC--CCCEEEEEEeeCC---CceecccchhHHH
Q psy13461 63 DTGYWQWSFQ-GK----IIKRFN--SPTFCQLRWRPRP---ASLLSKEQVDKIK 106 (194)
Q Consensus 63 D~~~~IW~~~-G~----~l~~~~--~~~~~~~~wrP~~---~~Lls~~~~~~Ik 106 (194)
|+.++|||+. +. ++..+. ...|..++|+|++ ..|+|++.|++|+
T Consensus 179 D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~ 232 (297)
T 2pm7_B 179 DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCI 232 (297)
T ss_dssp TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEE
T ss_pred CCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEE
Confidence 9999999995 44 444443 6789999999984 7899999999886
No 62
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.52 E-value=8.8e-14 Score=114.08 Aligned_cols=97 Identities=10% Similarity=0.103 Sum_probs=83.9
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeecc-CceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEeeC
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRFN 80 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h-~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~~ 80 (194)
|||+|++|++++ .||.|.+||+.+++.+....+ ..+++++|+|+|++|++++. |+.+++||+.+..+....
T Consensus 191 ~~~~~~~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------~~~i~~~~~~~~~~~~~~ 262 (337)
T 1gxr_A 191 ISNDGTKLWTGG--LDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGME------SSNVEVLHVNKPDKYQLH 262 (337)
T ss_dssp ECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEET------TSCEEEEETTSSCEEEEC
T ss_pred ECCCCCEEEEEe--cCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcC------CCcEEEEECCCCCeEEEc
Confidence 799999999999 799999999998887766543 67999999999999999985 899999999755444443
Q ss_pred --CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 81 --SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 81 --~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
...+..++|+|+++.|++++.++.|+
T Consensus 263 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 290 (337)
T 1gxr_A 263 LHESCVLSLKFAYCGKWFVSTGKDNLLN 290 (337)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred CCccceeEEEECCCCCEEEEecCCCcEE
Confidence 67899999999999999999988775
No 63
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.52 E-value=7.2e-14 Score=121.21 Aligned_cols=100 Identities=14% Similarity=0.295 Sum_probs=84.5
Q ss_pred ccCCCC-EEEEeecC-CCCeEEEEECCCCeEEeee-ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEE
Q psy13461 2 KCTMGT-HIVLAELR-DTGSLEFVDTGDFSVMNAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIK 77 (194)
Q Consensus 2 fSP~G~-~la~ag~~-~dg~l~fwD~~~~~~i~~~-~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~ 77 (194)
|+|++. ++++++ | .||+|+|||+.+++++... .|..+.++.|+|+|+++++++.. .|+.++|||+ +|+++.
T Consensus 284 ~~p~~~~~la~~~-gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~----~d~~I~iwd~~~~~~v~ 358 (420)
T 4gga_A 284 WCPWQSNVLATGG-GTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGF----AQNQLVIWKYPTMAKVA 358 (420)
T ss_dssp ECTTCTTEEEEEE-CTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECT----TTCCEEEEETTTCCEEE
T ss_pred eCCCcccEEEEEe-ecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEec----CCCEEEEEECCCCcEEE
Confidence 788776 555543 2 6899999999999887765 46789999999999999987642 4899999999 588888
Q ss_pred eeC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 78 RFN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 78 ~~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
.+. ...|..++|+|+|..|+|++.|++||
T Consensus 359 ~l~gH~~~V~~l~~spdg~~l~S~s~D~tvr 389 (420)
T 4gga_A 359 ELKGHTSRVLSLTMSPDGATVASAAADETLR 389 (420)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTTEEE
T ss_pred EEcCCCCCEEEEEEcCCCCEEEEEecCCeEE
Confidence 875 67899999999999999999999987
No 64
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.52 E-value=8.4e-15 Score=126.87 Aligned_cols=97 Identities=13% Similarity=0.194 Sum_probs=81.0
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEe-------eeccCceEEEEECC--------CCCEEEEeecCcccccCCeE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMN-------AAEHHQATDVEWDP--------TGRYVMSGVSLWKTKADTGY 66 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~-------~~~h~~vt~v~WsP--------dGr~lat~ss~~~~~~D~~~ 66 (194)
++|++++||+|+ .|++|++||+.++.+.. .+|...|++|+|+| ||++||||+. |+++
T Consensus 97 ~~~~~~~las~~--~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~------D~tv 168 (393)
T 4gq1_A 97 SPVYSLFLACVC--QDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD------DCTL 168 (393)
T ss_dssp CCEEEEEEEEEE--TTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET------TSEE
T ss_pred cCCCCCEEEEEe--CCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEEC------CCeE
Confidence 578888999999 79999999998765432 24557899999998 9999999995 9999
Q ss_pred EEEeec-CcEEEee--CCCCEEEEEEeeCCC-ceecccchhHHH
Q psy13461 67 WQWSFQ-GKIIKRF--NSPTFCQLRWRPRPA-SLLSKEQVDKIK 106 (194)
Q Consensus 67 ~IW~~~-G~~l~~~--~~~~~~~~~wrP~~~-~Lls~~~~~~Ik 106 (194)
+|||+. +..+... ....+..++|+|+++ .|++++.+++|+
T Consensus 169 ~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~ 212 (393)
T 4gq1_A 169 IIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIR 212 (393)
T ss_dssp EEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred EEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEE
Confidence 999994 5555543 377899999999875 799999999886
No 65
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.51 E-value=6.1e-14 Score=117.10 Aligned_cols=97 Identities=13% Similarity=0.269 Sum_probs=81.7
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCe--EEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-CcEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFS--VMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKII 76 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~--~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~~l 76 (194)
|||+|++||+|+ .+|.|.+||+.+.+ .+... +...|++++|+|+|++||+++. |+.++|||+. |+..
T Consensus 16 ~s~~~~~l~~~~--~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~------dg~i~vwd~~~~~~~ 87 (372)
T 1k8k_C 16 WNKDRTQIAICP--NNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT------DRNAYVWTLKGRTWK 87 (372)
T ss_dssp ECTTSSEEEEEC--SSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEET------TSCEEEEEEETTEEE
T ss_pred ECCCCCEEEEEe--CCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcC------CCeEEEEECCCCeee
Confidence 899999999998 69999999998875 55443 4478999999999999999995 9999999995 4433
Q ss_pred Eee----CCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 77 KRF----NSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 77 ~~~----~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
... ....+..+.|+|++..|++++.++.|+
T Consensus 88 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 121 (372)
T 1k8k_C 88 PTLVILRINRAARCVRWAPNEKKFAVGSGSRVIS 121 (372)
T ss_dssp EEEECCCCSSCEEEEEECTTSSEEEEEETTSSEE
T ss_pred eeEEeecCCCceeEEEECCCCCEEEEEeCCCEEE
Confidence 332 266899999999999999999988775
No 66
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.51 E-value=9.9e-15 Score=124.61 Aligned_cols=98 Identities=17% Similarity=0.196 Sum_probs=80.2
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEee--eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-CcEEE
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNA--AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIK 77 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~--~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~~l~ 77 (194)
.|||+|++|++|+ .||+|.+||+.+++++.. +|...|++++|+|+|++|+|++. |+.++|||+. |+.+.
T Consensus 146 ~~~~~~~~l~s~s--~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~------d~~v~iwd~~~~~~~~ 217 (420)
T 3vl1_A 146 KFFPSGEALISSS--QDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASL------DGTIRLWECGTGTTIH 217 (420)
T ss_dssp EECTTSSEEEEEE--TTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEET------TSCEEEEETTTTEEEE
T ss_pred EECCCCCEEEEEe--CCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcC------CCcEEEeECCCCceeE
Confidence 3899999999999 799999999998765544 34578999999999999999995 9999999994 77777
Q ss_pred eeC-----CCCEEEE---------------------EEeeCCCceecccchhHHH
Q psy13461 78 RFN-----SPTFCQL---------------------RWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 78 ~~~-----~~~~~~~---------------------~wrP~~~~Lls~~~~~~Ik 106 (194)
.+. ...+..+ +|+|++..|++++.++.|+
T Consensus 218 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 272 (420)
T 3vl1_A 218 TFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVIT 272 (420)
T ss_dssp EECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEE
T ss_pred EeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEE
Confidence 653 3345544 4578899999999998775
No 67
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.51 E-value=5.7e-14 Score=117.05 Aligned_cols=98 Identities=15% Similarity=0.315 Sum_probs=82.2
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECC--CCeEEee--eccCceEEEEECCC--CCEEEEeecCcccccCCeEEEEeec-C
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTG--DFSVMNA--AEHHQATDVEWDPT--GRYVMSGVSLWKTKADTGYWQWSFQ-G 73 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~--~~~~i~~--~~h~~vt~v~WsPd--Gr~lat~ss~~~~~~D~~~~IW~~~-G 73 (194)
.|||+|++||+|+ .||.|.+||+. +.+.+.. .|...|++++|+|+ |++||||+. |+.++|||+. |
T Consensus 18 ~~s~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~------dg~v~iwd~~~~ 89 (379)
T 3jrp_A 18 VLDYYGKRLATCS--SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY------DGKVLIWKEENG 89 (379)
T ss_dssp EECSSSSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET------TSCEEEEEEETT
T ss_pred EEcCCCCEEEEEE--CCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc------CCEEEEEEcCCC
Confidence 3899999999999 79999999987 4555444 34478999999988 999999995 9999999996 4
Q ss_pred c--EEEeeC--CCCEEEEEEeeC--CCceecccchhHHH
Q psy13461 74 K--IIKRFN--SPTFCQLRWRPR--PASLLSKEQVDKIK 106 (194)
Q Consensus 74 ~--~l~~~~--~~~~~~~~wrP~--~~~Lls~~~~~~Ik 106 (194)
+ .+.... ...+..++|+|+ +..|++++.++.|+
T Consensus 90 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~ 128 (379)
T 3jrp_A 90 RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS 128 (379)
T ss_dssp EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred ceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEE
Confidence 4 444443 678999999999 99999999998875
No 68
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.51 E-value=3.4e-14 Score=120.53 Aligned_cols=97 Identities=10% Similarity=0.136 Sum_probs=82.9
Q ss_pred ccCCC-CEEEEeecCCCCeEEEEECCCCeEEee----eccCceEEEEECC-CCCEEEEeecCcccccCCeEEEEeecCcE
Q psy13461 2 KCTMG-THIVLAELRDTGSLEFVDTGDFSVMNA----AEHHQATDVEWDP-TGRYVMSGVSLWKTKADTGYWQWSFQGKI 75 (194)
Q Consensus 2 fSP~G-~~la~ag~~~dg~l~fwD~~~~~~i~~----~~h~~vt~v~WsP-dGr~lat~ss~~~~~~D~~~~IW~~~G~~ 75 (194)
|||+| ++||+|+ .||+|.+||+.+.+.... ++...|++++|+| +|++|++++. |+.++|||+.|..
T Consensus 81 ~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~------d~~i~iwd~~~~~ 152 (383)
T 3ei3_B 81 WHPTHPTTVAVGS--KGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSI------RGATTLRDFSGSV 152 (383)
T ss_dssp ECSSCTTEEEEEE--BTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEET------TTEEEEEETTSCE
T ss_pred ECCCCCCEEEEEc--CCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeC------CCEEEEEECCCCc
Confidence 89999 9999999 799999999986554333 2447899999999 7899999985 9999999999887
Q ss_pred EEeeC-----CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 76 IKRFN-----SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 76 l~~~~-----~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+.... ...+..++|+|++..|++++.++.|+
T Consensus 153 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 188 (383)
T 3ei3_B 153 IQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLL 188 (383)
T ss_dssp EEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEE
T ss_pred eEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEE
Confidence 77653 25699999999999999999988774
No 69
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.51 E-value=3e-14 Score=122.04 Aligned_cols=97 Identities=16% Similarity=0.186 Sum_probs=74.0
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEee------eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-C
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNA------AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-G 73 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~------~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G 73 (194)
.|||+|++|++ + .||+|++||+.+++.+.. +|...|++|+|+|+|++||||+. |+.++|||+. |
T Consensus 101 ~~s~d~~~l~~-s--~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~------dg~v~iwd~~~~ 171 (357)
T 4g56_B 101 AWVSEKGILVA-S--DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGK------DFSVKVWDLSQK 171 (357)
T ss_dssp EEETTTEEEEE-E--TTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEET------TSCEEEEETTTT
T ss_pred EEcCCCCEEEE-E--CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeC------CCeEEEEECCCC
Confidence 38999987764 4 599999999887554321 23467999999999999999995 9999999994 7
Q ss_pred cEEEeeC--CCCEEEEEEeeCCC-ceecccchhHHH
Q psy13461 74 KIIKRFN--SPTFCQLRWRPRPA-SLLSKEQVDKIK 106 (194)
Q Consensus 74 ~~l~~~~--~~~~~~~~wrP~~~-~Lls~~~~~~Ik 106 (194)
+++..+. ...|+.++|+|++. .+++++.++.|+
T Consensus 172 ~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~ 207 (357)
T 4g56_B 172 AVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRIL 207 (357)
T ss_dssp EEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEE
T ss_pred cEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceE
Confidence 7777764 67899999999986 678999998875
No 70
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.50 E-value=5.3e-14 Score=120.93 Aligned_cols=96 Identities=10% Similarity=0.150 Sum_probs=78.8
Q ss_pred cCCCCEEEEeecCCCCeEEEEECCC-CeEEe--eeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-CcEEEe
Q psy13461 3 CTMGTHIVLAELRDTGSLEFVDTGD-FSVMN--AAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIKR 78 (194)
Q Consensus 3 SP~G~~la~ag~~~dg~l~fwD~~~-~~~i~--~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~~l~~ 78 (194)
+++|++|++|+ .||+|++||+.. ...+. .+|...|++|+|+|+|++||||+. |+.++|||+. |+++..
T Consensus 215 ~~~~~~l~sgs--~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~------D~~i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 215 SLNANMFISGS--CDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSD------DGTCRLFDMRTGHQLQV 286 (380)
T ss_dssp SSSCCEEEEEE--TTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECS------SSCEEEEETTTTEEEEE
T ss_pred cCCCCEEEEEE--CCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcC------CCeEEEEECCCCcEEEE
Confidence 34899999999 799999999863 33333 345578999999999999999995 9999999994 777765
Q ss_pred eCC---------CCEEEEEEeeCCCceecccchhHHH
Q psy13461 79 FNS---------PTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 79 ~~~---------~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+.. ..+..++|+|+|..|++++.++.|+
T Consensus 287 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~ 323 (380)
T 3iz6_a 287 YNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCY 323 (380)
T ss_dssp ECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEE
T ss_pred ecccccccccccCceEEEEECCCCCEEEEEECCCCEE
Confidence 431 2388999999999999999998775
No 71
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.50 E-value=1.1e-13 Score=127.65 Aligned_cols=97 Identities=19% Similarity=0.222 Sum_probs=81.7
Q ss_pred ccCCC-CEEEEeecCCCCeEEEEECCCC-----eEE--eeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-c
Q psy13461 2 KCTMG-THIVLAELRDTGSLEFVDTGDF-----SVM--NAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-Q 72 (194)
Q Consensus 2 fSP~G-~~la~ag~~~dg~l~fwD~~~~-----~~i--~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~ 72 (194)
|+|++ ++||+|+ .||+|++||+.+. .+. ..+|...|++|+|+|+|++|+||+. |+.++|||+ .
T Consensus 390 ~~~~~~~~l~s~s--~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~------Dg~v~vwd~~~ 461 (694)
T 3dm0_A 390 TPIDNADIIVSAS--RDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSW------DGELRLWDLAA 461 (694)
T ss_dssp CCTTCCSEEEEEE--TTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEET------TSEEEEEETTT
T ss_pred ecCCCCCEEEEEe--CCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeC------CCcEEEEECCC
Confidence 67875 7999999 7999999998742 222 2345578999999999999999995 999999999 4
Q ss_pred CcEEEeeC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 73 GKIIKRFN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 73 G~~l~~~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
|.++..+. ...|.+++|+|++..|+|++.+++|+
T Consensus 462 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~ 497 (694)
T 3dm0_A 462 GVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIK 497 (694)
T ss_dssp TEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred CcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEE
Confidence 77777663 67899999999999999999999886
No 72
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.50 E-value=5.2e-14 Score=118.08 Aligned_cols=92 Identities=13% Similarity=0.196 Sum_probs=75.2
Q ss_pred CCEEEEeecCCCCeEEEEECCCC---eEEee--eccCceEEEEECCCC----CEEEEeecCcccccCCeEEEEeecC---
Q psy13461 6 GTHIVLAELRDTGSLEFVDTGDF---SVMNA--AEHHQATDVEWDPTG----RYVMSGVSLWKTKADTGYWQWSFQG--- 73 (194)
Q Consensus 6 G~~la~ag~~~dg~l~fwD~~~~---~~i~~--~~h~~vt~v~WsPdG----r~lat~ss~~~~~~D~~~~IW~~~G--- 73 (194)
|++||+|+ .||+|++||+.+. +++.+ +|...|++|+|+|+| ++||||+. |+.++||++..
T Consensus 179 ~~~l~sgs--~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~------D~~v~iw~~~~~~~ 250 (316)
T 3bg1_A 179 IKRFASGG--CDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQ------DGRVFIWTCDDASS 250 (316)
T ss_dssp CCBEECCB--TTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEET------TCEEEEEECSSTTC
T ss_pred cceEEEec--CCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcC------CCeEEEEEccCccc
Confidence 57999999 7999999998743 34443 344679999999997 89999995 99999999853
Q ss_pred -----cEEEeeCCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 74 -----KIIKRFNSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 74 -----~~l~~~~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+.+ ......|+.++|+|+++.|++++.+++|+
T Consensus 251 ~~~~~~~~-~~~~~~v~~v~~sp~g~~las~~~D~~v~ 287 (316)
T 3bg1_A 251 NTWSPKLL-HKFNDVVWHVSWSITANILAVSGGDNKVT 287 (316)
T ss_dssp CCCBCCEE-EECSSCEEEEEECTTTCCEEEEESSSCEE
T ss_pred cchhhhhh-hcCCCcEEEEEEcCCCCEEEEEcCCCeEE
Confidence 122 22367899999999999999999999886
No 73
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.49 E-value=4e-14 Score=120.21 Aligned_cols=98 Identities=13% Similarity=0.184 Sum_probs=81.7
Q ss_pred CccCCCC-EEEEe----------ecCCCCeEEEEECCCCe---EEeee-ccCceEEEEECCCCCEEEEeecCcccccCCe
Q psy13461 1 MKCTMGT-HIVLA----------ELRDTGSLEFVDTGDFS---VMNAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADTG 65 (194)
Q Consensus 1 ~fSP~G~-~la~a----------g~~~dg~l~fwD~~~~~---~i~~~-~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~ 65 (194)
.|||+|+ +||+| + .||.|++||+.+.. .+... +...|++++|+|+|++||+|+. |+.
T Consensus 19 ~~sp~g~~~l~~g~~~g~~~~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------dg~ 90 (416)
T 2pm9_A 19 AWSHDKIPLLVSGTVSGTVDANFS--TDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALD------NGS 90 (416)
T ss_dssp CBCSSSSCEEEEBCBSSCCCSSCC--CCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEES------SSC
T ss_pred eeCCCCCCEEEEEecCcccccccC--CCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEcc------CCe
Confidence 4899998 89998 6 68999999998754 33333 3468999999999999999995 999
Q ss_pred EEEEeecC-----cEEEeeC--CCCEEEEEEeeC-CCceecccchhHHH
Q psy13461 66 YWQWSFQG-----KIIKRFN--SPTFCQLRWRPR-PASLLSKEQVDKIK 106 (194)
Q Consensus 66 ~~IW~~~G-----~~l~~~~--~~~~~~~~wrP~-~~~Lls~~~~~~Ik 106 (194)
++||++.. ..+..+. ...|..++|+|+ +..|++++.++.|+
T Consensus 91 v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~ 139 (416)
T 2pm9_A 91 LELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIF 139 (416)
T ss_dssp EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEE
T ss_pred EEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEE
Confidence 99999965 4666553 678999999998 89999999998875
No 74
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.49 E-value=1.3e-13 Score=116.29 Aligned_cols=96 Identities=6% Similarity=0.060 Sum_probs=82.6
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-Cc----
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GK---- 74 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~---- 74 (194)
|+|+| +|++++ .||.|.+||+.+++++... +...+++++|+|+|++||+++. |+.++|||+. +.
T Consensus 297 ~~~~~-~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------dg~i~i~~~~~~~~~~~ 367 (425)
T 1r5m_A 297 WVGDD-KVISCS--MDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFM------DGQVNVYDLKKLNSKSR 367 (425)
T ss_dssp EETTT-EEEEEE--TTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEET------TSCEEEEECHHHHC---
T ss_pred ECCCC-EEEEEe--CCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEEC------CCeEEEEECCCCcccee
Confidence 79999 899998 7999999999988876654 3468999999999999999995 9999999995 66
Q ss_pred ----------------EEEeeC--CC--CEEEEEEeeCCCceecccchhHHH
Q psy13461 75 ----------------IIKRFN--SP--TFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 75 ----------------~l~~~~--~~--~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
++..+. .. .+..++|+|+++.|++++.++.|+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 419 (425)
T 1r5m_A 368 SLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGS 419 (425)
T ss_dssp -----------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCE
T ss_pred eeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEE
Confidence 677665 23 999999999999999999988663
No 75
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.49 E-value=1.9e-13 Score=115.90 Aligned_cols=96 Identities=15% Similarity=0.260 Sum_probs=81.9
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEee--eccCceEEEEECCCCC-EEEEeecCcccccCCeEEEEeec-----C
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNA--AEHHQATDVEWDPTGR-YVMSGVSLWKTKADTGYWQWSFQ-----G 73 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~--~~h~~vt~v~WsPdGr-~lat~ss~~~~~~D~~~~IW~~~-----G 73 (194)
|||+|++||+|+ .||.|.+||+. ++.+.. .+...|++++|+|+|+ +|+||+. |+.++|||+. +
T Consensus 171 ~~~~~~~l~~~~--~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~------d~~i~iwd~~~~~~~~ 241 (383)
T 3ei3_B 171 VSVSRQMLATGD--STGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSV------DATVKLWDLRNIKDKN 241 (383)
T ss_dssp EETTTTEEEEEE--TTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEET------TSEEEEEEGGGCCSTT
T ss_pred ECCCCCEEEEEC--CCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeC------CCEEEEEeCCCCCccc
Confidence 799999999999 79999999995 444443 3447899999999999 8999985 9999999995 5
Q ss_pred cEEEeeC-CCCEEEEEEee-CCCceecccchhHHH
Q psy13461 74 KIIKRFN-SPTFCQLRWRP-RPASLLSKEQVDKIK 106 (194)
Q Consensus 74 ~~l~~~~-~~~~~~~~wrP-~~~~Lls~~~~~~Ik 106 (194)
.++.... ...+..++|+| ++..|++++.++.|+
T Consensus 242 ~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~ 276 (383)
T 3ei3_B 242 SYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIR 276 (383)
T ss_dssp CEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEE
T ss_pred ceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEE
Confidence 6666554 77899999999 999999999998776
No 76
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.49 E-value=5.9e-14 Score=122.51 Aligned_cols=97 Identities=10% Similarity=0.068 Sum_probs=80.6
Q ss_pred ccC-CCCEEEEeecCCCCeEEEEECCCCeEEee--ec--cCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEE
Q psy13461 2 KCT-MGTHIVLAELRDTGSLEFVDTGDFSVMNA--AE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKII 76 (194)
Q Consensus 2 fSP-~G~~la~ag~~~dg~l~fwD~~~~~~i~~--~~--h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l 76 (194)
||| +|++|++|+ .||+|++||+.+..+... .+ ...+.+++|+|+|++||+|+. |+.++|||+.|+.+
T Consensus 172 f~p~~~~~l~s~s--~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~------dg~i~~wd~~~~~~ 243 (435)
T 4e54_B 172 FNPLNTNQFYASS--MEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDN------VGNVILLNMDGKEL 243 (435)
T ss_dssp ECSSCTTEEEEEC--SSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECS------SSBEEEEESSSCBC
T ss_pred EeCCCCCEEEEEe--CCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeC------CCcEeeeccCccee
Confidence 898 689999999 799999999987543222 22 135789999999999999995 99999999999988
Q ss_pred EeeC--CCCEEEEEEeeCCC-ceecccchhHHH
Q psy13461 77 KRFN--SPTFCQLRWRPRPA-SLLSKEQVDKIK 106 (194)
Q Consensus 77 ~~~~--~~~~~~~~wrP~~~-~Lls~~~~~~Ik 106 (194)
..+. ...|..++|+|+++ .|++++.++.|+
T Consensus 244 ~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~ 276 (435)
T 4e54_B 244 WNLRMHKKKVTHVALNPCCDWFLATASVDQTVK 276 (435)
T ss_dssp CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCC
T ss_pred EEEecccceEEeeeecCCCceEEEEecCcceee
Confidence 7664 67899999999987 566899998875
No 77
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.49 E-value=1.8e-13 Score=111.52 Aligned_cols=65 Identities=12% Similarity=0.326 Sum_probs=55.7
Q ss_pred cCceEEEEECCCC----CEEEEeecCcccccCCeEEEEeecC--------------------------------------
Q psy13461 36 HHQATDVEWDPTG----RYVMSGVSLWKTKADTGYWQWSFQG-------------------------------------- 73 (194)
Q Consensus 36 h~~vt~v~WsPdG----r~lat~ss~~~~~~D~~~~IW~~~G-------------------------------------- 73 (194)
...|++++|+|+| ++||||+. |+.++|||+..
T Consensus 214 ~~~i~~~~~~p~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (351)
T 3f3f_A 214 KSLIRSISWAPSIGRWYQLIATGCK------DGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEK 287 (351)
T ss_dssp CSCEEEEEECCCSSCSSEEEEEEET------TSCEEEEEEEECC------------------------------------
T ss_pred CcceeEEEECCCCCCcceEEEEEcC------CCeEEEEeCCCCcCccccCCcccceeccCCCccccccccccccccccee
Confidence 4679999999999 89999995 99999999954
Q ss_pred ---------cEEEeeC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 74 ---------KIIKRFN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 74 ---------~~l~~~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+++..+. ...|..++|+|+++.|+|++.++.|+
T Consensus 288 ~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~ 331 (351)
T 3f3f_A 288 AELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVR 331 (351)
T ss_dssp ---CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEE
T ss_pred eeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEE
Confidence 4555443 56899999999999999999998876
No 78
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.48 E-value=8.8e-14 Score=133.90 Aligned_cols=97 Identities=11% Similarity=0.091 Sum_probs=86.0
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEeeecc-CceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEe
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKR 78 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h-~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~ 78 (194)
.|||+|++||+|+ .||+|++||..+.+++....| ..|++|+|+| |++|||++. |+.++|||+ +|+++..
T Consensus 24 afspdg~~lAsgs--~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~------D~~v~lWd~~~~~~~~~ 94 (902)
T 2oaj_A 24 AFDFTQNLLAIAT--VTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINA------KDTVYVLSLYSQKVLTT 94 (902)
T ss_dssp EEETTTTEEEEEE--TTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEET------TCEEEEEETTTCSEEEE
T ss_pred EECCCCCEEEEEe--CCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEEC------cCeEEEEECCCCcEEEE
Confidence 3899999999999 799999999998887766544 6799999999 999999995 999999999 4788776
Q ss_pred eC-CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 79 FN-SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 79 ~~-~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+. ...|..++|+|++..|++++.++.|+
T Consensus 95 ~~~~~~V~~v~~sp~g~~l~sgs~dg~V~ 123 (902)
T 2oaj_A 95 VFVPGKITSIDTDASLDWMLIGLQNGSMI 123 (902)
T ss_dssp EECSSCEEEEECCTTCSEEEEEETTSCEE
T ss_pred EcCCCCEEEEEECCCCCEEEEEcCCCcEE
Confidence 64 56899999999999999999999886
No 79
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.47 E-value=6.2e-14 Score=130.06 Aligned_cols=93 Identities=11% Similarity=0.183 Sum_probs=74.0
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeE-------Eee------eccCceEEEEECCCCCEEEEeecCcccccCCeEE
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSV-------MNA------AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYW 67 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~-------i~~------~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~ 67 (194)
.|||+|++||+|+ .||+|++||+.++.+ +.+ +|...|.+|+||||| +|+++. |++++
T Consensus 136 afSPDG~~LAsgs--~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~------D~tVr 205 (588)
T 2j04_A 136 EWNPIESSIVVGN--EDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALS------NNSVF 205 (588)
T ss_dssp EECSSSSCEEEEE--TTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEET------TCCEE
T ss_pred EEcCCCCEEEEEc--CCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeC------CCeEE
Confidence 4899999999999 799999999987632 233 223589999999999 666764 99999
Q ss_pred EEeecCcEEE----ee---CCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 68 QWSFQGKIIK----RF---NSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 68 IW~~~G~~l~----~~---~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+|+++|+.+. ++ +...|.+++|+ +..|+|++. ++|+
T Consensus 206 lWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~~-~tIk 248 (588)
T 2j04_A 206 SMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTCP-GYVH 248 (588)
T ss_dssp EECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEECS-SEEE
T ss_pred EEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEeC-CeEE
Confidence 9999876532 23 35679999999 789999984 6776
No 80
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.47 E-value=3.7e-14 Score=125.73 Aligned_cols=97 Identities=14% Similarity=0.199 Sum_probs=78.1
Q ss_pred ccCCCCEEE----EeecCCCCeEEEEECCCC--------e---EEee--eccCceEEEEECCC-CCEEEEeecCcccccC
Q psy13461 2 KCTMGTHIV----LAELRDTGSLEFVDTGDF--------S---VMNA--AEHHQATDVEWDPT-GRYVMSGVSLWKTKAD 63 (194)
Q Consensus 2 fSP~G~~la----~ag~~~dg~l~fwD~~~~--------~---~i~~--~~h~~vt~v~WsPd-Gr~lat~ss~~~~~~D 63 (194)
|||+|++|| +|+ .||+|++||+.+. + .+.. +|...|++|+|+|+ |.+|||++. |
T Consensus 100 ~spdg~~lav~~~sgs--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~------D 171 (434)
T 2oit_A 100 LSCDNLTLSACMMSSE--YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA------D 171 (434)
T ss_dssp ECTTSCEEEEEEEETT--TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET------T
T ss_pred EcCCCCEEEEEEeccC--CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC------C
Confidence 899999999 566 6999999997643 1 1222 24467999999998 899999995 9
Q ss_pred CeEEEEeec-CcEEEee--CCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 64 TGYWQWSFQ-GKIIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 64 ~~~~IW~~~-G~~l~~~--~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+.++|||+. |..+... ....+..++|+|+|..|++++.++.|+
T Consensus 172 g~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~ 217 (434)
T 2oit_A 172 GSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVV 217 (434)
T ss_dssp SCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEE
T ss_pred CeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEE
Confidence 999999995 5444333 256899999999999999999998775
No 81
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.46 E-value=1.8e-13 Score=117.38 Aligned_cols=97 Identities=9% Similarity=0.091 Sum_probs=82.4
Q ss_pred ccCCC-CEEEEeecCCCCeEEEEECCCCeEEeee----ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcE
Q psy13461 2 KCTMG-THIVLAELRDTGSLEFVDTGDFSVMNAA----EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKI 75 (194)
Q Consensus 2 fSP~G-~~la~ag~~~dg~l~fwD~~~~~~i~~~----~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~ 75 (194)
|||+| ++|++|+ .||+|.+||+.+++++.+. +...|++++|+|+|++|++++. |+.++|||+ +|+.
T Consensus 139 ~~p~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 139 WHPTAQNVLLSAG--CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR------DKRVRVIEPRKGTV 210 (402)
T ss_dssp ECSSBTTEEEEEE--TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET------TSEEEEEETTTTEE
T ss_pred ECcCCCCEEEEEc--CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec------CCcEEEEeCCCCce
Confidence 89999 6999999 7999999999998877665 3468999999999999999995 999999999 4777
Q ss_pred EEee-C--C-CCEEEEEEeeCCCceecc---cchhHHH
Q psy13461 76 IKRF-N--S-PTFCQLRWRPRPASLLSK---EQVDKIK 106 (194)
Q Consensus 76 l~~~-~--~-~~~~~~~wrP~~~~Lls~---~~~~~Ik 106 (194)
+... . . ..+..+.|+|++..|+++ +.++.|+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~ 248 (402)
T 2aq5_A 211 VAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVA 248 (402)
T ss_dssp EEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEE
T ss_pred eeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEE
Confidence 7765 3 2 248999999999999998 6777665
No 82
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.46 E-value=1.2e-13 Score=114.35 Aligned_cols=96 Identities=8% Similarity=0.071 Sum_probs=80.7
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCe----EEee-eccCceEEEEECCCCC-EEEEeecCcccccCCeEEEEee-cCc
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFS----VMNA-AEHHQATDVEWDPTGR-YVMSGVSLWKTKADTGYWQWSF-QGK 74 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~----~i~~-~~h~~vt~v~WsPdGr-~lat~ss~~~~~~D~~~~IW~~-~G~ 74 (194)
|||+|++||+|+ .||.|.+||+.+.. .... .+...|++++|+|+|+ +|++|+. |+.+++||+ .+.
T Consensus 19 ~s~~~~~l~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~------dg~i~~wd~~~~~ 90 (342)
T 1yfq_A 19 IIPSKSLLLITS--WDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV------QGEILKVDLIGSP 90 (342)
T ss_dssp EEGGGTEEEEEE--TTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET------TSCEEEECSSSSS
T ss_pred EcCCCCEEEEEc--CCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcC------CCeEEEEEeccCC
Confidence 899999999999 79999999988654 3333 3447899999999999 9999995 999999999 765
Q ss_pred EEEee----CCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 75 IIKRF----NSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 75 ~l~~~----~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
.+..+ ....|..++|+| +..|++++.++.|+
T Consensus 91 ~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~ 125 (342)
T 1yfq_A 91 SFQALTNNEANLGICRICKYG-DDKLIAASWDGLIE 125 (342)
T ss_dssp SEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEE
T ss_pred ceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEE
Confidence 55544 356799999999 99999999998775
No 83
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.46 E-value=9e-14 Score=115.18 Aligned_cols=97 Identities=13% Similarity=0.258 Sum_probs=79.3
Q ss_pred ccC---CCCEEEEeecCCCCeEEEEECCCCeEEe-------eeccCceEEEEECCCCC-EEEEeecCcccccCCeEEEEe
Q psy13461 2 KCT---MGTHIVLAELRDTGSLEFVDTGDFSVMN-------AAEHHQATDVEWDPTGR-YVMSGVSLWKTKADTGYWQWS 70 (194)
Q Consensus 2 fSP---~G~~la~ag~~~dg~l~fwD~~~~~~i~-------~~~h~~vt~v~WsPdGr-~lat~ss~~~~~~D~~~~IW~ 70 (194)
||| +|++|++|+ .||.|.+||+.+.+.+. ..+...|++++|+|+|+ +|++++. |+.++|||
T Consensus 217 ~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~------dg~i~iwd 288 (357)
T 3i2n_A 217 FDRKDISMNKLVATS--LEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGG------AGGLHLWK 288 (357)
T ss_dssp ESCSSSSCCEEEEEE--STTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEET------TSEEEEEE
T ss_pred cCCCCCCCCEEEEEC--CCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeC------CCcEEEee
Confidence 788 999999999 79999999987644321 13457899999999999 8999985 99999999
Q ss_pred ec-C-------------------cEEEeeC--CCCEEEEEEeeCCCcee-cccchhHHH
Q psy13461 71 FQ-G-------------------KIIKRFN--SPTFCQLRWRPRPASLL-SKEQVDKIK 106 (194)
Q Consensus 71 ~~-G-------------------~~l~~~~--~~~~~~~~wrP~~~~Ll-s~~~~~~Ik 106 (194)
+. + +++.... ...|..++|+|+++.|+ |++.++.|+
T Consensus 289 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~ 347 (357)
T 3i2n_A 289 YEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVR 347 (357)
T ss_dssp EECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEE
T ss_pred cCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEE
Confidence 95 2 3444443 67899999999999999 899988775
No 84
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.46 E-value=3e-13 Score=114.32 Aligned_cols=96 Identities=14% Similarity=0.172 Sum_probs=82.9
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee-----c---cCceEEEEECCCCCEEEEeecCcccccC---CeEEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA-----E---HHQATDVEWDPTGRYVMSGVSLWKTKAD---TGYWQWS 70 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~-----~---h~~vt~v~WsPdGr~lat~ss~~~~~~D---~~~~IW~ 70 (194)
|+|+| +|++|+ .||.|.+||+.+++.+... + ...|++++|+|+|++|++++. | +.++|||
T Consensus 194 ~~~~~-~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~------d~~~g~i~i~d 264 (397)
T 1sq9_A 194 ISERG-LIATGF--NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHD------SNSFGCITLYE 264 (397)
T ss_dssp ECTTS-EEEEEC--TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEE------ETTEEEEEEEE
T ss_pred ECCCc-eEEEEe--CCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEec------CCCCceEEEEE
Confidence 79999 999998 7999999999988776553 3 467999999999999999995 8 8999999
Q ss_pred e-cCcEEEeeC---------------CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 71 F-QGKIIKRFN---------------SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 71 ~-~G~~l~~~~---------------~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+ +|+.+..+. ...+..++|+|++..|++++.++.|+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 316 (397)
T 1sq9_A 265 TEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR 316 (397)
T ss_dssp TTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred CCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 8 577777653 46799999999999999999998775
No 85
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.45 E-value=5.4e-13 Score=111.31 Aligned_cols=96 Identities=5% Similarity=-0.116 Sum_probs=80.5
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECC------------------CCeEEeee--ccCceEEEEECCCCCEEEEeecCcccc
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTG------------------DFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTK 61 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~------------------~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~ 61 (194)
|+|+|++|++|+ .||.|.+||+. .++++... +...|++++|+|+|++|++++.
T Consensus 150 ~~~~~~~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----- 222 (372)
T 1k8k_C 150 WHPNSVLLAAGS--CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH----- 222 (372)
T ss_dssp ECTTSSEEEEEE--TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET-----
T ss_pred EcCCCCEEEEEc--CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeC-----
Confidence 799999999999 79999999953 45555543 3467999999999999999995
Q ss_pred cCCeEEEEee-cCcEEEeeC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 62 ADTGYWQWSF-QGKIIKRFN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 62 ~D~~~~IW~~-~G~~l~~~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
|+.++|||+ .|+++..+. ...+..++|+|++..|+++ .++.|+
T Consensus 223 -d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~ 268 (372)
T 1k8k_C 223 -DSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPV 268 (372)
T ss_dssp -TTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCE
T ss_pred -CCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEE
Confidence 999999999 588887764 5689999999999988877 666664
No 86
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.45 E-value=1.5e-13 Score=118.01 Aligned_cols=96 Identities=10% Similarity=0.172 Sum_probs=76.2
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCe-----------EEee--ecc------------CceEEEEECCCC--CEEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFS-----------VMNA--AEH------------HQATDVEWDPTG--RYVMSG 54 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~-----------~i~~--~~h------------~~vt~v~WsPdG--r~lat~ 54 (194)
|||+|++||+|+ .||.|.+||+.++. ++.. +|. ..|++++|+|+| .+|+++
T Consensus 36 ~s~~g~~la~g~--~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~ 113 (447)
T 3dw8_B 36 FNHSGELLATGD--KGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLS 113 (447)
T ss_dssp ECSSSSEEEEEE--TTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEE
T ss_pred ECCCCCEEEEEc--CCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEe
Confidence 899999999999 79999999988654 3333 333 569999999999 899999
Q ss_pred ecCcccccCCeEEEEeecCcEE----------------------------------------Ee---eCCCCEEEEEEee
Q psy13461 55 VSLWKTKADTGYWQWSFQGKII----------------------------------------KR---FNSPTFCQLRWRP 91 (194)
Q Consensus 55 ss~~~~~~D~~~~IW~~~G~~l----------------------------------------~~---~~~~~~~~~~wrP 91 (194)
+. |+.++||++..... .. -....|..++|+|
T Consensus 114 s~------d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 114 TN------DKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp EC------SSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred CC------CCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 85 99999999954221 11 1367799999999
Q ss_pred CCCceecccchhHHH
Q psy13461 92 RPASLLSKEQVDKIK 106 (194)
Q Consensus 92 ~~~~Lls~~~~~~Ik 106 (194)
++..|+|+ .++.|+
T Consensus 188 ~~~~l~s~-~d~~i~ 201 (447)
T 3dw8_B 188 DYETYLSA-DDLRIN 201 (447)
T ss_dssp TSSEEEEE-CSSEEE
T ss_pred CCCEEEEe-CCCeEE
Confidence 99999998 687775
No 87
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.45 E-value=2.9e-13 Score=131.28 Aligned_cols=98 Identities=11% Similarity=0.137 Sum_probs=85.3
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEE
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIK 77 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~ 77 (194)
.|||+|++||+|+ .||+|.+||+.+++.+.+. |...|++++|||+|++||||+. |+.++|||+ +|+++.
T Consensus 622 ~~s~~~~~l~s~~--~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~------d~~v~vwd~~~~~~~~ 693 (1249)
T 3sfz_A 622 CFSQDGQRIASCG--ADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSA------DKKVKIWDSATGKLVH 693 (1249)
T ss_dssp EECTTSSEEEEEE--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTCCEEE
T ss_pred EECCCCCEEEEEe--CCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeC------CCeEEEEECCCCceEE
Confidence 3899999999999 7999999999988776653 4578999999999999999995 999999999 588888
Q ss_pred eeC--CCCEEEEEEee--CCCceecccchhHHH
Q psy13461 78 RFN--SPTFCQLRWRP--RPASLLSKEQVDKIK 106 (194)
Q Consensus 78 ~~~--~~~~~~~~wrP--~~~~Lls~~~~~~Ik 106 (194)
.+. ...+..+.|+| ++..++|++.++.|+
T Consensus 694 ~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~ 726 (1249)
T 3sfz_A 694 TYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLK 726 (1249)
T ss_dssp EEECCSSCEEEEEECSSSSCCEEEEEETTSCEE
T ss_pred EEcCCCCcEEEEEEecCCCceEEEEEeCCCeEE
Confidence 764 67899999999 556788999988775
No 88
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.45 E-value=4.3e-13 Score=110.55 Aligned_cols=97 Identities=15% Similarity=0.232 Sum_probs=78.9
Q ss_pred ccCC-CCEEEEeecCCCCeEEEEECCCCe-----EEe--eeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecC
Q psy13461 2 KCTM-GTHIVLAELRDTGSLEFVDTGDFS-----VMN--AAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQG 73 (194)
Q Consensus 2 fSP~-G~~la~ag~~~dg~l~fwD~~~~~-----~i~--~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G 73 (194)
|||+ |++||+|| .||+|++||+.+.. ... .+|...|++++|+|+|++|+|++. |+.+++|+...
T Consensus 46 ~sp~~~~~l~S~s--~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~------d~~i~~~~~~~ 117 (340)
T 4aow_A 46 TTPQFPDMILSAS--RDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSW------DGTLRLWDLTT 117 (340)
T ss_dssp ECTTCTTEEEEEE--TTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEET------TSEEEEEETTT
T ss_pred EeCCCCCEEEEEc--CCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcc------cccceEEeecc
Confidence 8998 68999999 79999999987532 222 234478999999999999999995 99999999964
Q ss_pred cEE-Eee--CCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 74 KII-KRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 74 ~~l-~~~--~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
... ... ....+..+.++|.++.|+|++.++.++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~ 153 (340)
T 4aow_A 118 GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 153 (340)
T ss_dssp TEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred cceeeeecCCCCceeEEEEeecCccceeecCCCeEE
Confidence 433 332 367889999999999999999988765
No 89
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.45 E-value=3.7e-13 Score=111.37 Aligned_cols=62 Identities=19% Similarity=0.317 Sum_probs=53.7
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeecc-CceEEEEE--CCCCCEEEEeecCcccccCCeEEEEee
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH-HQATDVEW--DPTGRYVMSGVSLWKTKADTGYWQWSF 71 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h-~~vt~v~W--sPdGr~lat~ss~~~~~~D~~~~IW~~ 71 (194)
|||+|++||+|+ .||.|.+||+.+.+++....| ..|++++| +|+|++|++++. |+.++|||+
T Consensus 94 ~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~------dg~i~vwd~ 158 (368)
T 3mmy_A 94 WSDDGSKVFTAS--CDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSW------DKTLKFWDT 158 (368)
T ss_dssp ECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEET------TSEEEEECS
T ss_pred ECcCCCEEEEEc--CCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccC------CCcEEEEEC
Confidence 899999999999 799999999999887765544 68999999 999999999985 677777775
No 90
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.44 E-value=3.6e-13 Score=109.55 Aligned_cols=94 Identities=13% Similarity=0.198 Sum_probs=79.1
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKR 78 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~ 78 (194)
|||+|+ +++++ .+|.|.+||+.+++.+... +...|++++|+|+| +|++++. |+.++|||+ +|+++..
T Consensus 192 ~~~~~~-~~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~------dg~v~iwd~~~~~~~~~ 261 (313)
T 3odt_A 192 VVDDGH-FISCS--NDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGE------DRTVRIWSKENGSLKQV 261 (313)
T ss_dssp EEETTE-EEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEET------TSEEEEECTTTCCEEEE
T ss_pred EcCCCe-EEEcc--CCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEec------CCEEEEEECCCCceeEE
Confidence 789999 77887 7999999999988776654 44789999999999 5777874 999999998 5887776
Q ss_pred eC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 79 FN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 79 ~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
.. ...+..++|+|++. |++++.++.|+
T Consensus 262 ~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~ 290 (313)
T 3odt_A 262 ITLPAISIWSVDCMSNGD-IIVGSSDNLVR 290 (313)
T ss_dssp EECSSSCEEEEEECTTSC-EEEEETTSCEE
T ss_pred EeccCceEEEEEEccCCC-EEEEeCCCcEE
Confidence 64 66899999999998 77888888775
No 91
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.44 E-value=3e-13 Score=112.00 Aligned_cols=97 Identities=11% Similarity=0.176 Sum_probs=81.1
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee-ccCceEEEEECC---CCCEEEEeecCcccccCCeEEEEeec-CcEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA-EHHQATDVEWDP---TGRYVMSGVSLWKTKADTGYWQWSFQ-GKII 76 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~-~h~~vt~v~WsP---dGr~lat~ss~~~~~~D~~~~IW~~~-G~~l 76 (194)
|||+|++|++|+ .||.|.+||+.+++++... +...|++++|+| +|.+|++++. |+.++|||+. ++.+
T Consensus 176 ~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~ 247 (357)
T 3i2n_A 176 YNQEERVVCAGY--DNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSL------EGKFHVFDMRTQHPT 247 (357)
T ss_dssp CC-CCCEEEEEE--TTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEES------TTEEEEEEEEEEETT
T ss_pred cCCCCCEEEEEc--cCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECC------CCeEEEEeCcCCCcc
Confidence 899999999999 7999999999988876554 447899999999 9999999985 9999999995 4332
Q ss_pred Ee-------eCCCCEEEEEEeeCCC-ceecccchhHHH
Q psy13461 77 KR-------FNSPTFCQLRWRPRPA-SLLSKEQVDKIK 106 (194)
Q Consensus 77 ~~-------~~~~~~~~~~wrP~~~-~Lls~~~~~~Ik 106 (194)
.. .....+..++|+|+++ .|++++.++.|+
T Consensus 248 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 285 (357)
T 3i2n_A 248 KGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLH 285 (357)
T ss_dssp TEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred cceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEE
Confidence 22 2367899999999998 899999998775
No 92
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.44 E-value=7.5e-14 Score=118.49 Aligned_cols=97 Identities=5% Similarity=-0.013 Sum_probs=79.4
Q ss_pred ccC-CCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCC-CEEEEeecCcccccCCeEEEEeecC-cEE
Q psy13461 2 KCT-MGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTG-RYVMSGVSLWKTKADTGYWQWSFQG-KII 76 (194)
Q Consensus 2 fSP-~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdG-r~lat~ss~~~~~~D~~~~IW~~~G-~~l 76 (194)
||| +|++|++|+ .||.|.+||+.+++.+... +...|++++|+|+| ++||+++. |+.++||++.. ...
T Consensus 270 ~s~~~~~~l~s~~--~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~------d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 270 WCHQDEHLLLSSG--RDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASF------DNKIEVQTLQNLTNT 341 (416)
T ss_dssp ECSSCSSCEEEEE--SSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCS------SSEEEEEESCCCCCS
T ss_pred eCCCCCCeEEEEe--CCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEec------CCcEEEEEccCCCCC
Confidence 799 999999999 7999999999988776653 44679999999999 89999995 99999999953 211
Q ss_pred Eee-------------------------------------CCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 77 KRF-------------------------------------NSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 77 ~~~-------------------------------------~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
... ....+..++|+|+|..|++++.++.|+
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~ 408 (416)
T 2pm9_A 342 LDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVS 408 (416)
T ss_dssp SCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBC
T ss_pred cccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEE
Confidence 110 234567899999999999999988774
No 93
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.43 E-value=1.7e-13 Score=118.25 Aligned_cols=97 Identities=7% Similarity=0.101 Sum_probs=82.1
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee----ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA----EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKII 76 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~----~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l 76 (194)
++|+|++|++|+ .||.|.+||+.+++++.+. +...|++++|+|+|++||+|+. |+.++|||+ .|+++
T Consensus 178 ~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~------dg~i~iwd~~~~~~~ 249 (437)
T 3gre_A 178 VNEEKSLLVALT--NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTT------RGIIDIWDIRFNVLI 249 (437)
T ss_dssp ECSSCEEEEEEE--TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEET------TSCEEEEETTTTEEE
T ss_pred EcCCCCEEEEEe--CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcC------CCeEEEEEcCCccEE
Confidence 568999999999 7999999999988776653 3478999999999999999995 999999999 47777
Q ss_pred EeeC---CCCEEEEEEee----CCCceecccchhHHH
Q psy13461 77 KRFN---SPTFCQLRWRP----RPASLLSKEQVDKIK 106 (194)
Q Consensus 77 ~~~~---~~~~~~~~wrP----~~~~Lls~~~~~~Ik 106 (194)
..+. ...|..+.|+| ++..|++++.++.|+
T Consensus 250 ~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~ 286 (437)
T 3gre_A 250 RSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLT 286 (437)
T ss_dssp EEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEE
T ss_pred EEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEE
Confidence 7653 45799997765 577999999998776
No 94
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.43 E-value=5.8e-13 Score=115.47 Aligned_cols=93 Identities=18% Similarity=0.294 Sum_probs=74.5
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee---cc-CceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA---EH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKII 76 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~---~h-~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l 76 (194)
||++ +.||+|. |++|++||+.+++++... .| ..|++|+|+|+|++||||+. |+.++|||+ +|+++
T Consensus 113 wS~~-n~lAvgl---d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~------Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 113 WSSG-NVLAVAL---DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS------SAEVQLWDVQQQKRL 182 (420)
T ss_dssp ECTT-SEEEEEE---TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET------TSCEEEEETTTTEEE
T ss_pred ECCC-CEEEEEe---CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEEC------CCeEEEEEcCCCcEE
Confidence 6775 4777664 899999999998766532 23 56999999999999999995 999999999 58888
Q ss_pred EeeC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 77 KRFN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 77 ~~~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
.... ...+..++| ++..|++++.+..|+
T Consensus 183 ~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~ 212 (420)
T 4gga_A 183 RNMTSHSARVGSLSW--NSYILSSGSRSGHIH 212 (420)
T ss_dssp EEECCCSSCEEEEEE--ETTEEEEEETTSEEE
T ss_pred EEEeCCCCceEEEee--CCCEEEEEeCCCcee
Confidence 8775 556777666 567999999988775
No 95
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.42 E-value=4e-13 Score=115.29 Aligned_cols=96 Identities=7% Similarity=0.159 Sum_probs=78.3
Q ss_pred ccCCC--CEEEEeecCCCCeEEEEECCCCeEE------------------------------------------eeeccC
Q psy13461 2 KCTMG--THIVLAELRDTGSLEFVDTGDFSVM------------------------------------------NAAEHH 37 (194)
Q Consensus 2 fSP~G--~~la~ag~~~dg~l~fwD~~~~~~i------------------------------------------~~~~h~ 37 (194)
|+|+| .+|++|+ .||+|++||+.+.... ..+|..
T Consensus 101 ~~~~~~~~~l~s~s--~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 178 (447)
T 3dw8_B 101 WLPQKNAAQFLLST--NDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY 178 (447)
T ss_dssp ECCCCSSSEEEEEE--CSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS
T ss_pred EcCCCCcceEEEeC--CCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc
Confidence 89999 8999998 7999999998753321 123447
Q ss_pred ceEEEEECCCCCEEEEeecCcccccCCeEEEEeec--CcEEEe-------e--CCCCEEEEEEeeCC-CceecccchhHH
Q psy13461 38 QATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ--GKIIKR-------F--NSPTFCQLRWRPRP-ASLLSKEQVDKI 105 (194)
Q Consensus 38 ~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~--G~~l~~-------~--~~~~~~~~~wrP~~-~~Lls~~~~~~I 105 (194)
.|++++|+|+|++|||| . |+.++|||+. ++.+.. . ....|..++|+|++ ..|++++.++.|
T Consensus 179 ~v~~~~~~~~~~~l~s~-~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 179 HINSISINSDYETYLSA-D------DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp CCCEEEECTTSSEEEEE-C------SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred ceEEEEEcCCCCEEEEe-C------CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE
Confidence 89999999999999998 4 9999999996 444442 2 25679999999998 899999999988
Q ss_pred H
Q psy13461 106 K 106 (194)
Q Consensus 106 k 106 (194)
+
T Consensus 252 ~ 252 (447)
T 3dw8_B 252 R 252 (447)
T ss_dssp E
T ss_pred E
Confidence 6
No 96
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.42 E-value=9e-13 Score=108.96 Aligned_cols=94 Identities=17% Similarity=0.155 Sum_probs=78.9
Q ss_pred ccC-CCCEEEEeecCCCCeEEEEECCCC------eEEee--ecc---------CceEEEEECCCCCEEEEeecCcccccC
Q psy13461 2 KCT-MGTHIVLAELRDTGSLEFVDTGDF------SVMNA--AEH---------HQATDVEWDPTGRYVMSGVSLWKTKAD 63 (194)
Q Consensus 2 fSP-~G~~la~ag~~~dg~l~fwD~~~~------~~i~~--~~h---------~~vt~v~WsPdGr~lat~ss~~~~~~D 63 (194)
|+| +|++|++|+ .+|.|.+||++.. +.+.. .+. ..|++++|+|+|++||+++. |
T Consensus 201 ~~~~~~~~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------d 272 (342)
T 1yfq_A 201 LLPKEQEGYACSS--IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS------D 272 (342)
T ss_dssp ECSGGGCEEEEEE--TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEET------T
T ss_pred ECCCCCCEEEEEe--cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecC------C
Confidence 799 999999999 7999999998754 33222 232 28999999999999999995 9
Q ss_pred CeEEEEeec-CcEEEeeC---CCCEEEEEEeeCCCceecccchhHH
Q psy13461 64 TGYWQWSFQ-GKIIKRFN---SPTFCQLRWRPRPASLLSKEQVDKI 105 (194)
Q Consensus 64 ~~~~IW~~~-G~~l~~~~---~~~~~~~~wrP~~~~Lls~~~~~~I 105 (194)
+.++|||+. |+++..+. ...|..++ |++..|++++.++.+
T Consensus 273 g~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~ 316 (342)
T 1yfq_A 273 GIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTF 316 (342)
T ss_dssp SCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHH
T ss_pred ceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCcc
Confidence 999999995 88887764 45788998 999999999999984
No 97
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.41 E-value=5e-13 Score=123.47 Aligned_cols=98 Identities=15% Similarity=0.228 Sum_probs=83.4
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-C-cEE
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-G-KII 76 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G-~~l 76 (194)
.|||+|++||+|+ .||.|.+||+.+++.+.+. |...|++++|+|+|++|++++. |+.++|||+. | .+.
T Consensus 62 ~~s~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------dg~i~vw~~~~~~~~~ 133 (814)
T 3mkq_A 62 KFIARKNWIIVGS--DDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD------DLTVKLWNWENNWALE 133 (814)
T ss_dssp EEEGGGTEEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEET------TSEEEEEEGGGTSEEE
T ss_pred EEeCCCCEEEEEe--CCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcC------CCEEEEEECCCCceEE
Confidence 3899999999999 7999999999988776653 4467999999999999999995 9999999996 3 344
Q ss_pred Eee--CCCCEEEEEEee-CCCceecccchhHHH
Q psy13461 77 KRF--NSPTFCQLRWRP-RPASLLSKEQVDKIK 106 (194)
Q Consensus 77 ~~~--~~~~~~~~~wrP-~~~~Lls~~~~~~Ik 106 (194)
... ....+..++|+| ++..|++++.++.|+
T Consensus 134 ~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~ 166 (814)
T 3mkq_A 134 QTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVK 166 (814)
T ss_dssp EEEECCSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred EEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEE
Confidence 443 367899999999 899999999998775
No 98
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.41 E-value=7.9e-13 Score=110.08 Aligned_cols=94 Identities=14% Similarity=0.215 Sum_probs=75.8
Q ss_pred CCCEEEEeecCCCCeEEEEECCCCe----EEee--eccCceEEEEECCC---CCEEEEeecCcccccCCeEEEEeecCc-
Q psy13461 5 MGTHIVLAELRDTGSLEFVDTGDFS----VMNA--AEHHQATDVEWDPT---GRYVMSGVSLWKTKADTGYWQWSFQGK- 74 (194)
Q Consensus 5 ~G~~la~ag~~~dg~l~fwD~~~~~----~i~~--~~h~~vt~v~WsPd---Gr~lat~ss~~~~~~D~~~~IW~~~G~- 74 (194)
+|++|++|+ .||.|++||+.+.. ++.. .|...|++++|+|+ |++||+++. |+.++|||+...
T Consensus 171 ~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~------dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 171 ESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ------DRTCIIWTQDNEQ 242 (379)
T ss_dssp TTCEEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET------TSCEEEEEESSTT
T ss_pred CCCEEEEEe--CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC------CCEEEEEeCCCCC
Confidence 799999999 79999999986532 3332 34468999999999 999999995 999999999632
Q ss_pred -----EEEee--CCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 75 -----IIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 75 -----~l~~~--~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
.+... ....+..++|+|+++.|++++.++.|+
T Consensus 243 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~ 281 (379)
T 3jrp_A 243 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVT 281 (379)
T ss_dssp SCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEE
T ss_pred ccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEE
Confidence 22222 356799999999999999999998775
No 99
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.40 E-value=4.8e-13 Score=117.03 Aligned_cols=97 Identities=9% Similarity=0.072 Sum_probs=79.4
Q ss_pred ccCCCCEE-EEeecCCCCeEEEEECC--CCeEEeee----ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-C
Q psy13461 2 KCTMGTHI-VLAELRDTGSLEFVDTG--DFSVMNAA----EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-G 73 (194)
Q Consensus 2 fSP~G~~l-a~ag~~~dg~l~fwD~~--~~~~i~~~----~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G 73 (194)
|||+|++| |+|+ .||+|.+||+. +++++... +...|++++|+|+|++|++|+. |+.+++|++. +
T Consensus 110 ~s~d~~~l~~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~------~g~v~~~~~~~~ 181 (450)
T 2vdu_B 110 LTSDESRLIACAD--SDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK------FGDVYSIDINSI 181 (450)
T ss_dssp ECTTSSEEEEEEG--GGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET------TSEEEEEETTSC
T ss_pred EcCCCCEEEEEEC--CCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC------CCcEEEEecCCc
Confidence 89999996 7887 69999999988 66555442 2367999999999999999985 8999999984 4
Q ss_pred cEEE----ee--CCCCEEEEEEeeC---CCceecccchhHHH
Q psy13461 74 KIIK----RF--NSPTFCQLRWRPR---PASLLSKEQVDKIK 106 (194)
Q Consensus 74 ~~l~----~~--~~~~~~~~~wrP~---~~~Lls~~~~~~Ik 106 (194)
.... .+ ....|..++|+|+ +..|+|++.++.|+
T Consensus 182 ~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~ 223 (450)
T 2vdu_B 182 PEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIK 223 (450)
T ss_dssp CCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEE
T ss_pred ccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEE
Confidence 4332 22 3678999999999 99999999998876
No 100
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.39 E-value=2e-12 Score=105.58 Aligned_cols=101 Identities=14% Similarity=0.297 Sum_probs=80.7
Q ss_pred ccCCCCEEE-EeecCCCCeEEEEECCCCeEEeee-ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEe
Q psy13461 2 KCTMGTHIV-LAELRDTGSLEFVDTGDFSVMNAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKR 78 (194)
Q Consensus 2 fSP~G~~la-~ag~~~dg~l~fwD~~~~~~i~~~-~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~ 78 (194)
++|++..++ +++-..+++|++||.......... ++..+..+.|+|+++++++++.. .|+.++|||+ +|+++..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~----~d~~i~iwd~~~~~~~~~ 279 (318)
T 4ggc_A 204 WCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGF----AQNQLVIWKYPTMAKVAE 279 (318)
T ss_dssp ECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECT----TTCCEEEEETTTCCEEEE
T ss_pred ecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEc----CCCEEEEEECCCCcEEEE
Confidence 567766443 222116899999999876665543 45789999999999999887642 4899999999 5888888
Q ss_pred eC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 79 FN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 79 ~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+. ...|.+++|+|+++.|+|++.|++||
T Consensus 280 l~gH~~~V~~l~~spdg~~l~S~s~D~~v~ 309 (318)
T 4ggc_A 280 LKGHTSRVLSLTMSPDGATVASAAADETLR 309 (318)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTTEEE
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEecCCeEE
Confidence 75 67899999999999999999999885
No 101
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.39 E-value=9e-13 Score=115.00 Aligned_cols=97 Identities=10% Similarity=0.276 Sum_probs=78.8
Q ss_pred ccCCCC-EEEEeecCCCCeEEEEECCC-CeEEee--eccCceEEEEECCCCC-EEEEeecCcccccCCeEEEEeecC---
Q psy13461 2 KCTMGT-HIVLAELRDTGSLEFVDTGD-FSVMNA--AEHHQATDVEWDPTGR-YVMSGVSLWKTKADTGYWQWSFQG--- 73 (194)
Q Consensus 2 fSP~G~-~la~ag~~~dg~l~fwD~~~-~~~i~~--~~h~~vt~v~WsPdGr-~lat~ss~~~~~~D~~~~IW~~~G--- 73 (194)
|||+|+ +||+|+ .||+|.+||+.+ ...+.. .+...|++|+|+|+|+ +|||++. |+.++|||+..
T Consensus 285 ~~p~~~~~l~tg~--~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~------d~~i~iwd~~~~~~ 356 (430)
T 2xyi_A 285 FNPYSEFILATGS--ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT------DRRLHVWDLSKIGE 356 (430)
T ss_dssp ECSSCTTEEEEEE--TTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEET------TSCCEEEEGGGTTC
T ss_pred eCCCCCCEEEEEe--CCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeC------CCcEEEEeCCCCcc
Confidence 899998 688888 799999999886 333333 3457899999999996 4788874 99999999964
Q ss_pred ------------cEEEeeC--CCCEEEEEEeeCCC-ceecccchhHHH
Q psy13461 74 ------------KIIKRFN--SPTFCQLRWRPRPA-SLLSKEQVDKIK 106 (194)
Q Consensus 74 ------------~~l~~~~--~~~~~~~~wrP~~~-~Lls~~~~~~Ik 106 (194)
.++.... ...++.++|+|+++ .|+|++.++.|+
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~ 404 (430)
T 2xyi_A 357 EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQ 404 (430)
T ss_dssp CCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEE
T ss_pred ccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEE
Confidence 6666654 56799999999999 899999998775
No 102
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.39 E-value=3.6e-13 Score=116.17 Aligned_cols=98 Identities=11% Similarity=0.074 Sum_probs=76.1
Q ss_pred CccC-CCCEEEEeecCCCCeEEEEECCC---C---eEEee-eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-
Q psy13461 1 MKCT-MGTHIVLAELRDTGSLEFVDTGD---F---SVMNA-AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF- 71 (194)
Q Consensus 1 ~fSP-~G~~la~ag~~~dg~l~fwD~~~---~---~~i~~-~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~- 71 (194)
.||| +|++||+|+ .||+|++||+.+ + ..... .+...|++++|+|+|++||+|+. |+.++|||+
T Consensus 70 ~~s~~~~~~l~s~s--~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~------dg~i~vwd~~ 141 (437)
T 3gre_A 70 AVSPGETPYLITGS--DQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSK------DGQIIVLKVN 141 (437)
T ss_dssp EEECSSSCEEEEEE--TTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEET------TSEEEEEEEE
T ss_pred EECCCCCCEEEEec--CCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeC------CCEEEEEEec
Confidence 3899 999999999 799999999865 2 22233 34478999999999999999995 999999998
Q ss_pred ---cCcEEEeeCCCC--------------EEEEE--EeeCCCceecccchhHHH
Q psy13461 72 ---QGKIIKRFNSPT--------------FCQLR--WRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 72 ---~G~~l~~~~~~~--------------~~~~~--wrP~~~~Lls~~~~~~Ik 106 (194)
.|+++....... +..+. |+|++..|++++.++.|+
T Consensus 142 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 195 (437)
T 3gre_A 142 HYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVI 195 (437)
T ss_dssp EEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEE
T ss_pred cccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEE
Confidence 566655433223 34443 567899999999998875
No 103
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.38 E-value=1.4e-12 Score=122.39 Aligned_cols=98 Identities=14% Similarity=0.286 Sum_probs=82.4
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECC--CCeEEee--eccCceEEEEECCC--CCEEEEeecCcccccCCeEEEEeecCc
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTG--DFSVMNA--AEHHQATDVEWDPT--GRYVMSGVSLWKTKADTGYWQWSFQGK 74 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~--~~~~i~~--~~h~~vt~v~WsPd--Gr~lat~ss~~~~~~D~~~~IW~~~G~ 74 (194)
.|||+|++||+|+ .||+|.+||+. +++++.+ +|...|++++|+|+ |++|+||+. |+.++|||+.+.
T Consensus 16 ~~s~dg~~latg~--~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~------Dg~I~vwd~~~~ 87 (753)
T 3jro_A 16 VLDYYGKRLATCS--SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY------DGKVLIWKEENG 87 (753)
T ss_dssp CCCSSSCCEEEEE--TTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEET------TSCEEEEEEETT
T ss_pred EECCCCCeEEEEE--CCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeC------CCeEEEEECCCC
Confidence 4899999999999 79999999987 4455444 34578999999998 999999995 999999999643
Q ss_pred ---EEEee--CCCCEEEEEEeeC--CCceecccchhHHH
Q psy13461 75 ---IIKRF--NSPTFCQLRWRPR--PASLLSKEQVDKIK 106 (194)
Q Consensus 75 ---~l~~~--~~~~~~~~~wrP~--~~~Lls~~~~~~Ik 106 (194)
.+... ....|..++|+|+ +..|++++.++.|+
T Consensus 88 ~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~ 126 (753)
T 3jro_A 88 RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS 126 (753)
T ss_dssp EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred cccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEE
Confidence 44444 3678999999999 99999999998876
No 104
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.38 E-value=2.6e-12 Score=114.09 Aligned_cols=93 Identities=14% Similarity=0.143 Sum_probs=78.6
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCC----eEEeee--ccCc-eEEEEECC--CCCEEEEeecCcccccCCeEEEEee
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDF----SVMNAA--EHHQ-ATDVEWDP--TGRYVMSGVSLWKTKADTGYWQWSF 71 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~----~~i~~~--~h~~-vt~v~WsP--dGr~lat~ss~~~~~~D~~~~IW~~ 71 (194)
.|||+|++||+++ ++.|.+||+.++ +.+... |... |++++|+| +|++||+|+. |+.++|||+
T Consensus 25 ~~spdg~~l~~~~---~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~------dg~v~vw~~ 95 (615)
T 1pgu_A 25 SYDPTTNAIAYPC---GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDE------SGKVIVWGW 95 (615)
T ss_dssp EEETTTTEEEEEE---TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEET------TSEEEEEEE
T ss_pred EECCCCCEEEEec---CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecC------CCEEEEEeC
Confidence 3899999999998 789999999877 555443 4467 99999999 9999999995 999999999
Q ss_pred -cC--------cEEEeeC--CCCEEEEEEeeCCCceecccch
Q psy13461 72 -QG--------KIIKRFN--SPTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 72 -~G--------~~l~~~~--~~~~~~~~wrP~~~~Lls~~~~ 102 (194)
.| .++..+. ...+..++|+|++..|++++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~ 137 (615)
T 1pgu_A 96 TFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEG 137 (615)
T ss_dssp EEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECC
T ss_pred CCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccC
Confidence 34 5555553 6789999999999999999876
No 105
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.37 E-value=2.3e-12 Score=110.80 Aligned_cols=99 Identities=13% Similarity=0.244 Sum_probs=80.5
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCE-EEEeecCcccccCCeEEEEee-cCcEEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRY-VMSGVSLWKTKADTGYWQWSF-QGKIIK 77 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~-lat~ss~~~~~~D~~~~IW~~-~G~~l~ 77 (194)
|||+|++||+|+ .||.|.+||+.+++.+... +...|++++|+|+|.+ +++++. ..|+.+++||+ +|+++.
T Consensus 225 ~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~g----s~d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 225 WRSDGLQLASGG--NDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGG----TMDKQIHFWNAATGARVN 298 (401)
T ss_dssp ECTTSSEEEEEE--TTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECC----TTTCEEEEEETTTCCEEE
T ss_pred EcCCCCEEEEEe--CCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecC----CCCCEEEEEECCCCCEEE
Confidence 899999999999 7999999999987776553 4468999999998754 555431 14999999999 588887
Q ss_pred eeC-CCCEEEEEEeeCCCceec--ccchhHHH
Q psy13461 78 RFN-SPTFCQLRWRPRPASLLS--KEQVDKIK 106 (194)
Q Consensus 78 ~~~-~~~~~~~~wrP~~~~Lls--~~~~~~Ik 106 (194)
... ...+..++|+|+++.|++ ++.++.|+
T Consensus 299 ~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~ 330 (401)
T 4aez_A 299 TVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLS 330 (401)
T ss_dssp EEECSSCEEEEEECSSSSEEEEEECTTTCEEE
T ss_pred EEeCCCcEEEEEECCCCCeEEEEeecCCCcEE
Confidence 765 678999999999999999 44777665
No 106
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.37 E-value=2.6e-12 Score=124.67 Aligned_cols=98 Identities=11% Similarity=0.128 Sum_probs=85.6
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECC--CCCEEEEeecCcccccCCeEEEEee-cCcE
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDP--TGRYVMSGVSLWKTKADTGYWQWSF-QGKI 75 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsP--dGr~lat~ss~~~~~~D~~~~IW~~-~G~~ 75 (194)
.|||+|++||+|+ .||+|.+||+.+++++.+. +...|++++|+| ++.+++||+. |+.+++||+ +|++
T Consensus 664 ~~s~~~~~l~s~~--~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~------d~~v~vwd~~~~~~ 735 (1249)
T 3sfz_A 664 AFSSDDSYIATCS--ADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSN------DFFLKLWDLNQKEC 735 (1249)
T ss_dssp EECTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEET------TSCEEEEETTSSSE
T ss_pred EEecCCCEEEEEe--CCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeC------CCeEEEEECCCcch
Confidence 3899999999999 7999999999998877654 447899999999 5668999985 999999999 5777
Q ss_pred EEeeC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 76 IKRFN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 76 l~~~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+.... ...|..++|+|+++.|+|++.++.|+
T Consensus 736 ~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~ 768 (1249)
T 3sfz_A 736 RNTMFGHTNSVNHCRFSPDDELLASCSADGTLR 768 (1249)
T ss_dssp EEEECCCSSCEEEEEECSSTTEEEEEESSSEEE
T ss_pred hheecCCCCCEEEEEEecCCCEEEEEECCCeEE
Confidence 77764 67899999999999999999998876
No 107
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.37 E-value=1.5e-12 Score=113.84 Aligned_cols=96 Identities=16% Similarity=0.162 Sum_probs=82.3
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEe------eeccCceEEEEECCC---CCEEEEeecCcccccCCeEEEEeec
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMN------AAEHHQATDVEWDPT---GRYVMSGVSLWKTKADTGYWQWSFQ 72 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~------~~~h~~vt~v~WsPd---Gr~lat~ss~~~~~~D~~~~IW~~~ 72 (194)
|||+|++|++|+ .+|.|.+||+.++.... .++...|++++|+|+ |++|+||+. |+.++|||+.
T Consensus 157 ~sp~~~~l~~~~--~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~------d~~i~vwd~~ 228 (450)
T 2vdu_B 157 IAEDDTTVIIAD--KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR------DEHIKISHYP 228 (450)
T ss_dssp ECTTSSEEEEEE--TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEET------TSCEEEEEES
T ss_pred EcCCCCEEEEEe--CCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcC------CCcEEEEECC
Confidence 899999999999 79999999988755432 344578999999999 999999995 9999999994
Q ss_pred -CcEEEee---CCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 73 -GKIIKRF---NSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 73 -G~~l~~~---~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
|+++... ....|..++|+ ++..|+|++.++.|+
T Consensus 229 ~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~ 265 (450)
T 2vdu_B 229 QCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIF 265 (450)
T ss_dssp CTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEE
T ss_pred CCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEE
Confidence 7777663 36789999999 999999999998876
No 108
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.36 E-value=9.8e-13 Score=109.00 Aligned_cols=95 Identities=14% Similarity=0.194 Sum_probs=79.5
Q ss_pred ccC-CCCEEEEeecCCCCeEEEEECCCCeEEeee-----ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-Cc
Q psy13461 2 KCT-MGTHIVLAELRDTGSLEFVDTGDFSVMNAA-----EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GK 74 (194)
Q Consensus 2 fSP-~G~~la~ag~~~dg~l~fwD~~~~~~i~~~-----~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~ 74 (194)
||| +|++||+|+ .||.|.+||+.+++.+... +...|++++|+|+|++|++++. |+.+++||+. ++
T Consensus 123 ~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~ 194 (366)
T 3k26_A 123 FHPRDPNLLLSVS--KDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGM------DHSLKLWRINSKR 194 (366)
T ss_dssp ECSSCTTEEEEEE--TTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEET------TSCEEEEESCSHH
T ss_pred ECCCCCCEEEEEe--CCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecC------CCCEEEEECCCCc
Confidence 899 999999999 7999999999988876653 3468999999999999999995 9999999995 44
Q ss_pred EEEee------------------------------CCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 75 IIKRF------------------------------NSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 75 ~l~~~------------------------------~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
.+... ....|..+.|+ +..|++++.++.|+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~ 254 (366)
T 3k26_A 195 MMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIV 254 (366)
T ss_dssp HHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEE
T ss_pred cccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEE
Confidence 33211 45679999999 77999999988775
No 109
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.35 E-value=2.6e-12 Score=107.96 Aligned_cols=98 Identities=15% Similarity=0.164 Sum_probs=80.1
Q ss_pred CccC-CCCEEEEeecCCCCeEEEEECCCCeEEee---------------eccCceEEEEECC-CCCEEEEeecCcccccC
Q psy13461 1 MKCT-MGTHIVLAELRDTGSLEFVDTGDFSVMNA---------------AEHHQATDVEWDP-TGRYVMSGVSLWKTKAD 63 (194)
Q Consensus 1 ~fSP-~G~~la~ag~~~dg~l~fwD~~~~~~i~~---------------~~h~~vt~v~WsP-dGr~lat~ss~~~~~~D 63 (194)
.||| +|++||+|+ .||.|.+||+.+...... ++...|++++|+| +|++|++++. |
T Consensus 50 ~~s~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~------d 121 (408)
T 4a11_B 50 DIEPVEGRYMLSGG--SDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSF------D 121 (408)
T ss_dssp EECTTTCCEEEEEE--TTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEET------T
T ss_pred EEecCCCCEEEEEc--CCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeC------C
Confidence 3899 999999999 799999999986543222 1447899999999 8889999985 9
Q ss_pred CeEEEEeec-CcEEEeeC-CCCEEEEEEeeCCC---ceecccchhHHH
Q psy13461 64 TGYWQWSFQ-GKIIKRFN-SPTFCQLRWRPRPA---SLLSKEQVDKIK 106 (194)
Q Consensus 64 ~~~~IW~~~-G~~l~~~~-~~~~~~~~wrP~~~---~Lls~~~~~~Ik 106 (194)
+.++|||+. |+.+.... ...+..+.|.|.++ .|++++.++.|+
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 169 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQ 169 (408)
T ss_dssp SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEE
T ss_pred CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEE
Confidence 999999995 66666554 67899999999665 899999887664
No 110
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.35 E-value=3.3e-12 Score=110.88 Aligned_cols=95 Identities=16% Similarity=0.225 Sum_probs=83.3
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKR 78 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~ 78 (194)
++|+|++|++|+ .||.|.+||+.+++++... +...|++++|+|+|++|++|+. |+.++|||+ +|+++..
T Consensus 276 ~~~~~~~l~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~------dg~i~vwd~~~~~~~~~ 347 (464)
T 3v7d_B 276 VSGHGNIVVSGS--YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASM------DTTIRIWDLENGELMYT 347 (464)
T ss_dssp EEEETTEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEET------TSCEEEEETTTTEEEEE
T ss_pred EcCCCCEEEEEe--CCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeC------CCcEEEEECCCCcEEEE
Confidence 478999999999 7999999999998877664 4478999999999999999995 999999999 5888887
Q ss_pred eC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 79 FN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 79 ~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+. ...+..+.|+ |..|+|++.++.|+
T Consensus 348 ~~~h~~~v~~~~~~--~~~l~s~s~dg~v~ 375 (464)
T 3v7d_B 348 LQGHTALVGLLRLS--DKFLVSAAADGSIR 375 (464)
T ss_dssp ECCCSSCEEEEEEC--SSEEEEEETTSEEE
T ss_pred EeCCCCcEEEEEEc--CCEEEEEeCCCcEE
Confidence 74 6789999997 57999999998876
No 111
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.35 E-value=3.4e-12 Score=110.85 Aligned_cols=96 Identities=11% Similarity=0.159 Sum_probs=82.7
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKR 78 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~ 78 (194)
++++|++||+|+ .||+|++||+.+++++... |...|++++|+|+| +|+||+. |+.++|||+ +|+++..
T Consensus 128 ~~~~~~~l~sgs--~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~------dg~i~vwd~~~~~~~~~ 198 (464)
T 3v7d_B 128 LQFEDNYVITGA--DDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGST------DRTVRVWDIKKGCCTHV 198 (464)
T ss_dssp EEEETTEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEET------TSCEEEEETTTTEEEEE
T ss_pred EEECCCEEEEEc--CCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeC------CCCEEEEECCCCcEEEE
Confidence 467889999999 7999999999998877654 45789999999999 8999985 999999999 4877777
Q ss_pred eC--CCCEEEEEEee--CCCceecccchhHHH
Q psy13461 79 FN--SPTFCQLRWRP--RPASLLSKEQVDKIK 106 (194)
Q Consensus 79 ~~--~~~~~~~~wrP--~~~~Lls~~~~~~Ik 106 (194)
+. ...|..++|+| +++.|++++.++.|+
T Consensus 199 ~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~ 230 (464)
T 3v7d_B 199 FEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH 230 (464)
T ss_dssp ECCCSSCEEEEEEEESSSCEEEEEEETTSCEE
T ss_pred ECCCCCccEEEEEecCCCCCEEEEEcCCCcEE
Confidence 64 67899999995 668899999998886
No 112
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.35 E-value=4.8e-12 Score=107.11 Aligned_cols=99 Identities=14% Similarity=0.185 Sum_probs=79.7
Q ss_pred CccCCCCEE-EEeecCCCCeEEEEECCCCeEEeee-ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-CcEEE
Q psy13461 1 MKCTMGTHI-VLAELRDTGSLEFVDTGDFSVMNAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIK 77 (194)
Q Consensus 1 ~fSP~G~~l-a~ag~~~dg~l~fwD~~~~~~i~~~-~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~~l~ 77 (194)
.|||+|++| ++++ .+++|.+||+.+++++... .+..+++++|+|+|++|+.+++ .++.+++||+. |+.+.
T Consensus 38 ~~s~dg~~l~~~~~--~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~-----~~~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 38 VISPDGTKVYVANA--HSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNM-----ASSTLSVIDTTSNTVAG 110 (391)
T ss_dssp EECTTSSEEEEEEG--GGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEET-----TTTEEEEEETTTTEEEE
T ss_pred EECCCCCEEEEECC--CCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEEC-----CCCEEEEEECCCCeEEE
Confidence 389999987 4555 5899999999998887664 3458999999999999976664 37999999995 66666
Q ss_pred eeC-CCCEEEEEEeeCCCce-ecccchhHHH
Q psy13461 78 RFN-SPTFCQLRWRPRPASL-LSKEQVDKIK 106 (194)
Q Consensus 78 ~~~-~~~~~~~~wrP~~~~L-ls~~~~~~Ik 106 (194)
... ...+..++|+|+++.| ++++.++.|+
T Consensus 111 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~ 141 (391)
T 1l0q_A 111 TVKTGKSPLGLALSPDGKKLYVTNNGDKTVS 141 (391)
T ss_dssp EEECSSSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EEeCCCCcceEEECCCCCEEEEEeCCCCEEE
Confidence 554 5678999999999987 6887776654
No 113
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.34 E-value=4.8e-12 Score=108.83 Aligned_cols=95 Identities=15% Similarity=0.292 Sum_probs=81.2
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec--CcEEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ--GKIIK 77 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~--G~~l~ 77 (194)
|||+|++||+|+ .||.|.+||+.+++.+.+. +...|++++| +|++|++|+. |+.+++||+. +..+.
T Consensus 142 ~s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~------dg~i~i~d~~~~~~~~~ 211 (401)
T 4aez_A 142 WSHDGSFLSVGL--GNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSR------SGAIHHHDVRIANHQIG 211 (401)
T ss_dssp ECTTSSEEEEEE--TTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEET------TSEEEEEETTSSSCEEE
T ss_pred ECCCCCEEEEEC--CCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcC------CCCEEEEecccCcceee
Confidence 899999999999 7999999999987776653 4478999999 5679999995 9999999996 45555
Q ss_pred ee--CCCCEEEEEEeeCCCceecccchhHHH
Q psy13461 78 RF--NSPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 78 ~~--~~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
.. ....+..++|+|++..|++++.++.|+
T Consensus 212 ~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~ 242 (401)
T 4aez_A 212 TLQGHSSEVCGLAWRSDGLQLASGGNDNVVQ 242 (401)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEcCCCCCeeEEEEcCCCCEEEEEeCCCeEE
Confidence 54 367899999999999999999998875
No 114
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.34 E-value=6.6e-12 Score=111.22 Aligned_cols=90 Identities=13% Similarity=0.136 Sum_probs=73.8
Q ss_pred ccCC-CCEEEEeecCCCCeEEEEECCCCeEEee--eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEe
Q psy13461 2 KCTM-GTHIVLAELRDTGSLEFVDTGDFSVMNA--AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKR 78 (194)
Q Consensus 2 fSP~-G~~la~ag~~~dg~l~fwD~~~~~~i~~--~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~ 78 (194)
|||+ |.+||+|+ .||+|++||+.+...+.. .+...|++++|||+|++||+|+. |+.++|||..|.....
T Consensus 157 ~~p~~~~~las~s--~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~------dg~v~iwd~~~~~~~~ 228 (434)
T 2oit_A 157 WNPTVPSMVAVCL--ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQ------NGTVVQYLPTLQEKKV 228 (434)
T ss_dssp ECSSCTTEEEEEE--TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEET------TSCEEEECTTCCEEEE
T ss_pred ECCCCCCEEEEEE--CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcC------CCcEEEEccCCccccc
Confidence 8998 88999999 799999999988765433 23468999999999999999995 9999999999776655
Q ss_pred eC--C-------CCEEEEEEeeCCCceecc
Q psy13461 79 FN--S-------PTFCQLRWRPRPASLLSK 99 (194)
Q Consensus 79 ~~--~-------~~~~~~~wrP~~~~Lls~ 99 (194)
.. . ..+.++.|+|++..+++.
T Consensus 229 ~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~ 258 (434)
T 2oit_A 229 IPCPPFYESDHPVRVLDVLWIGTYVFAIVY 258 (434)
T ss_dssp ECCCTTCCTTSCEEEEEEEEEETTEEEEEE
T ss_pred ccCCcccCCCCceeEEEEEEecCceEEEEE
Confidence 42 1 178999999988877543
No 115
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.33 E-value=1.2e-12 Score=113.27 Aligned_cols=94 Identities=12% Similarity=0.149 Sum_probs=72.8
Q ss_pred CCCEEEEeecCCCCeEEEEECCCCeEEee--eccCceEEEEECCCCC-EEEEeecCcccccCCeEEEEeec-CcEEEee-
Q psy13461 5 MGTHIVLAELRDTGSLEFVDTGDFSVMNA--AEHHQATDVEWDPTGR-YVMSGVSLWKTKADTGYWQWSFQ-GKIIKRF- 79 (194)
Q Consensus 5 ~G~~la~ag~~~dg~l~fwD~~~~~~i~~--~~h~~vt~v~WsPdGr-~lat~ss~~~~~~D~~~~IW~~~-G~~l~~~- 79 (194)
+|++||+|| .|++|++||+.+...+.. .++..|.+|+|+|+|. +|++|+. |+.++|||+. |+.....
T Consensus 155 d~~~las~s--~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~------d~~v~~wd~~t~~~~~~~~ 226 (393)
T 4gq1_A 155 AEQVIASVG--DDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGER------NGNIRIFDWTLNLSAEENS 226 (393)
T ss_dssp EEEEEEEEE--TTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEET------TSEEEEEETTCCC------
T ss_pred CCCEEEEEE--CCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCC------CCEEEEEECCCCccccccc
Confidence 899999999 799999999876554332 4567899999999985 7999985 9999999984 4433221
Q ss_pred --------------------------CCCCEEEEEEe-eCCCceecccchhHHH
Q psy13461 80 --------------------------NSPTFCQLRWR-PRPASLLSKEQVDKIK 106 (194)
Q Consensus 80 --------------------------~~~~~~~~~wr-P~~~~Lls~~~~~~Ik 106 (194)
....+..+.|. |++..|++++.++.|+
T Consensus 227 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~ 280 (393)
T 4gq1_A 227 QTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWL 280 (393)
T ss_dssp ----CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEE
T ss_pred ccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEE
Confidence 13457788886 8999999999998774
No 116
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.31 E-value=4.8e-12 Score=102.81 Aligned_cols=95 Identities=7% Similarity=0.133 Sum_probs=78.5
Q ss_pred ccC-CCCEEEEeecCCCCeEEEEECCCCeEEeee-ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-CcEEEe
Q psy13461 2 KCT-MGTHIVLAELRDTGSLEFVDTGDFSVMNAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIKR 78 (194)
Q Consensus 2 fSP-~G~~la~ag~~~dg~l~fwD~~~~~~i~~~-~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~~l~~ 78 (194)
|+| +|++|++++ .||.|.+||.......... +...+++++|+|+|+ |++++. |+.++|||+. |+++..
T Consensus 150 ~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~------dg~i~i~d~~~~~~~~~ 220 (313)
T 3odt_A 150 VVSFSENKFLTAS--ADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSN------DGLIKLVDMHTGDVLRT 220 (313)
T ss_dssp EEETTTTEEEEEE--TTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEET------TSEEEEEETTTCCEEEE
T ss_pred EccCCCCEEEEEE--CCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEccC------CCeEEEEECCchhhhhh
Confidence 455 999999999 7999999996554444444 447899999999999 788874 9999999995 888877
Q ss_pred eC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 79 FN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 79 ~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+. ...+..++|+|++ .|++++.++.|+
T Consensus 221 ~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~ 249 (313)
T 3odt_A 221 YEGHESFVYCIKLLPNG-DIVSCGEDRTVR 249 (313)
T ss_dssp EECCSSCEEEEEECTTS-CEEEEETTSEEE
T ss_pred hhcCCceEEEEEEecCC-CEEEEecCCEEE
Confidence 64 6789999999999 699999998875
No 117
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.31 E-value=1.7e-11 Score=107.26 Aligned_cols=99 Identities=11% Similarity=0.177 Sum_probs=73.4
Q ss_pred CccCCCCEEEEeecC-CCCeEEEEECCCCeEEeeec-cCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEe
Q psy13461 1 MKCTMGTHIVLAELR-DTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKR 78 (194)
Q Consensus 1 ~fSP~G~~la~ag~~-~dg~l~fwD~~~~~~i~~~~-h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~ 78 (194)
.|||+|++||+++.. .+..|.+||+.++++..... ...+.+++|||||++||..++. ..+..+++||+.+..+..
T Consensus 185 ~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~---~g~~~i~~~d~~~~~~~~ 261 (415)
T 2hqs_A 185 AWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSK---TGSLNLYVMDLASGQIRQ 261 (415)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECT---TSSCEEEEEETTTCCEEE
T ss_pred EEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEec---CCCceEEEEECCCCCEEe
Confidence 389999999999842 12499999999877654433 3579999999999999944431 013458999996544444
Q ss_pred eC--CCCEEEEEEeeCCCceecccch
Q psy13461 79 FN--SPTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 79 ~~--~~~~~~~~wrP~~~~Lls~~~~ 102 (194)
+. ...+..++|+|+|..|++.+..
T Consensus 262 l~~~~~~~~~~~~spdg~~l~~~s~~ 287 (415)
T 2hqs_A 262 VTDGRSNNTEPTWFPDSQNLAFTSDQ 287 (415)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEECT
T ss_pred CcCCCCcccceEECCCCCEEEEEECC
Confidence 43 4579999999999999988753
No 118
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.30 E-value=6.1e-12 Score=114.70 Aligned_cols=96 Identities=6% Similarity=0.036 Sum_probs=75.6
Q ss_pred ccCC------CCEEEEeecCCCCeEEEEECCCCeE-------------EeeeccCceEEEEECCCCCEEEEeecCccccc
Q psy13461 2 KCTM------GTHIVLAELRDTGSLEFVDTGDFSV-------------MNAAEHHQATDVEWDPTGRYVMSGVSLWKTKA 62 (194)
Q Consensus 2 fSP~------G~~la~ag~~~dg~l~fwD~~~~~~-------------i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~ 62 (194)
|||+ |++||+|+ .||+|++||+.+..+ ...++...|++++|+|++ +||||+.
T Consensus 215 wsp~~~~~~~~~~LAs~s--~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~------ 285 (524)
T 2j04_B 215 WHEGCHAPHLVGCLSFVS--QEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFK------ 285 (524)
T ss_dssp ECSSCCCSSSSCEEEEEE--TTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEET------
T ss_pred ECCCCCCCCCCceEEEEe--cCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeC------
Confidence 6765 78999999 799999999976431 122344689999999976 7999995
Q ss_pred CCeEEEEeec-CcEE-E--eeCCCCEEEE--EEeeCC-CceecccchhHHH
Q psy13461 63 DTGYWQWSFQ-GKII-K--RFNSPTFCQL--RWRPRP-ASLLSKEQVDKIK 106 (194)
Q Consensus 63 D~~~~IW~~~-G~~l-~--~~~~~~~~~~--~wrP~~-~~Lls~~~~~~Ik 106 (194)
|++|+|||+. |... . ......|.++ +|+|+| ..|+|++.|++||
T Consensus 286 DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvk 336 (524)
T 2j04_B 286 NGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFY 336 (524)
T ss_dssp TSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEE
T ss_pred CCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEE
Confidence 9999999996 5432 2 2347789998 678888 8899999999886
No 119
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.28 E-value=2.3e-11 Score=102.84 Aligned_cols=98 Identities=11% Similarity=0.182 Sum_probs=78.8
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee-ccCceEEEEECCCCCEE-EEeecCcccccCCeEEEEee-cCcEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA-EHHQATDVEWDPTGRYV-MSGVSLWKTKADTGYWQWSF-QGKIIKR 78 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~-~h~~vt~v~WsPdGr~l-at~ss~~~~~~D~~~~IW~~-~G~~l~~ 78 (194)
|||+|++|++++. .++.|.+||+.+++.+... .+..+.+++|+|+|++| ++++ .|+.+++||+ .|+++..
T Consensus 81 ~spdg~~l~~~~~-~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~------~~~~v~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 81 VSPDGKQVYVTNM-ASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNN------GDKTVSVINTVTKAVINT 153 (391)
T ss_dssp ECTTSSEEEEEET-TTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEET------TTTEEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEEEC-CCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeC------CCCEEEEEECCCCcEEEE
Confidence 8999999877663 4799999999998877654 45679999999999988 4555 3899999998 4777766
Q ss_pred eC-CCCEEEEEEeeCCCce-ecccchhHHH
Q psy13461 79 FN-SPTFCQLRWRPRPASL-LSKEQVDKIK 106 (194)
Q Consensus 79 ~~-~~~~~~~~wrP~~~~L-ls~~~~~~Ik 106 (194)
.. ...+..++|+|++..| ++++.++.|+
T Consensus 154 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~ 183 (391)
T 1l0q_A 154 VSVGRSPKGIAVTPDGTKVYVANFDSMSIS 183 (391)
T ss_dssp EECCSSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EecCCCcceEEECCCCCEEEEEeCCCCEEE
Confidence 65 5678999999999988 6777766553
No 120
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.27 E-value=2.6e-11 Score=101.77 Aligned_cols=97 Identities=12% Similarity=0.144 Sum_probs=81.9
Q ss_pred ccC-CCCEEEEeecCCCCeEEEEECCCCeEEeeec-cCceEEEEECCC---CCEEEEeecCcccccCCeEEEEeec-CcE
Q psy13461 2 KCT-MGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPT---GRYVMSGVSLWKTKADTGYWQWSFQ-GKI 75 (194)
Q Consensus 2 fSP-~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~-h~~vt~v~WsPd---Gr~lat~ss~~~~~~D~~~~IW~~~-G~~ 75 (194)
|+| +|++|++|+ .||.|.+||+.+++.+.... ...+.++.|+|. |.+|++++. |+.+++||+. |++
T Consensus 107 ~~~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~d~~~~~~ 178 (408)
T 4a11_B 107 WYPHDTGMFTSSS--FDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTR------GPKVQLCDLKSGSC 178 (408)
T ss_dssp ECTTCTTCEEEEE--TTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEES------SSSEEEEESSSSCC
T ss_pred EccCCCcEEEEEe--CCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcC------CCeEEEEeCCCcce
Confidence 789 778999999 79999999999988776654 367999999995 459999985 9999999995 776
Q ss_pred EEeeC--CCCEEEEEEeeCCCc-eecccchhHHH
Q psy13461 76 IKRFN--SPTFCQLRWRPRPAS-LLSKEQVDKIK 106 (194)
Q Consensus 76 l~~~~--~~~~~~~~wrP~~~~-Lls~~~~~~Ik 106 (194)
+..+. ...+..++|+|+++. |++++.++.|+
T Consensus 179 ~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~ 212 (408)
T 4a11_B 179 SHILQGHRQEILAVSWSPRYDYILATASADSRVK 212 (408)
T ss_dssp CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEE
Confidence 66654 678999999999996 88999998876
No 121
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.26 E-value=2.5e-11 Score=105.78 Aligned_cols=97 Identities=15% Similarity=0.264 Sum_probs=77.5
Q ss_pred ccC-CCCEEEEeecCCCCeEEEEECCCC---eEEee--eccCceEEEEECCCCC-EEEEeecCcccccCCeEEEEeec--
Q psy13461 2 KCT-MGTHIVLAELRDTGSLEFVDTGDF---SVMNA--AEHHQATDVEWDPTGR-YVMSGVSLWKTKADTGYWQWSFQ-- 72 (194)
Q Consensus 2 fSP-~G~~la~ag~~~dg~l~fwD~~~~---~~i~~--~~h~~vt~v~WsPdGr-~lat~ss~~~~~~D~~~~IW~~~-- 72 (194)
|+| ++.+||+|+ .||.|.+||+.+. +.+.. .+...|++++|+|+|+ +||||+. |+.++|||+.
T Consensus 239 ~~p~~~~~l~s~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~------dg~v~vwd~~~~ 310 (430)
T 2xyi_A 239 WHLLHESLFGSVA--DDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSA------DKTVALWDLRNL 310 (430)
T ss_dssp ECSSCTTEEEEEE--TTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEET------TSEEEEEETTCT
T ss_pred EeCCCCCEEEEEe--CCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeC------CCeEEEEeCCCC
Confidence 789 677888988 7999999999865 33332 3446899999999998 5788884 9999999995
Q ss_pred CcEEEee--CCCCEEEEEEeeCCCc-eecccchhHHH
Q psy13461 73 GKIIKRF--NSPTFCQLRWRPRPAS-LLSKEQVDKIK 106 (194)
Q Consensus 73 G~~l~~~--~~~~~~~~~wrP~~~~-Lls~~~~~~Ik 106 (194)
+..+..+ ....+.++.|+|+++. |+|++.++.|+
T Consensus 311 ~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~ 347 (430)
T 2xyi_A 311 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 347 (430)
T ss_dssp TSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCE
T ss_pred CCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEE
Confidence 4455554 3678999999999975 88999888775
No 122
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.24 E-value=1.6e-11 Score=112.93 Aligned_cols=92 Identities=9% Similarity=0.164 Sum_probs=74.3
Q ss_pred ccCCCCEEEEeecCC-CC-----eEEEEECCCCeEEeee--cc------------------------CceEEEEECCCCC
Q psy13461 2 KCTMGTHIVLAELRD-TG-----SLEFVDTGDFSVMNAA--EH------------------------HQATDVEWDPTGR 49 (194)
Q Consensus 2 fSP~G~~la~ag~~~-dg-----~l~fwD~~~~~~i~~~--~h------------------------~~vt~v~WsPdGr 49 (194)
|||||++||+++ . +| +|.+||+.+++..... +. ..+.+++|||||+
T Consensus 44 ~SpdG~~la~~~--~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~ 121 (741)
T 2ecf_A 44 VAPDGSRVTFLR--GKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQ 121 (741)
T ss_dssp ECTTSSEEEEEE--CCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSS
T ss_pred EecCCCEEEEEe--ccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCC
Confidence 899999999998 4 77 8999999987654432 21 2378999999999
Q ss_pred EEEEeecCcccccCCeEEEEeecCc---EEEeeC--CCCEEEEEEeeCCCceecccch
Q psy13461 50 YVMSGVSLWKTKADTGYWQWSFQGK---IIKRFN--SPTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 50 ~lat~ss~~~~~~D~~~~IW~~~G~---~l~~~~--~~~~~~~~wrP~~~~Lls~~~~ 102 (194)
+||+++ ++.+++||+.+. .+..+. ...+..++|+|+|+.|++.+..
T Consensus 122 ~l~~~~-------~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~ 172 (741)
T 2ecf_A 122 RLLFPL-------GGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGR 172 (741)
T ss_dssp EEEEEE-------TTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEe-------CCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCC
Confidence 999998 489999999765 555443 4679999999999999988753
No 123
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.24 E-value=8.7e-12 Score=114.77 Aligned_cols=97 Identities=11% Similarity=0.185 Sum_probs=75.4
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEeeec-cC----ceEEEEECCCCCEEEEeec---CcccccCCeEEEEeec
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HH----QATDVEWDPTGRYVMSGVS---LWKTKADTGYWQWSFQ 72 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~-h~----~vt~v~WsPdGr~lat~ss---~~~~~~D~~~~IW~~~ 72 (194)
.|||+|+++++++ +|+|.+||+.++++..... +. .+.+++|||||++||+++. .|++..++.++|||+.
T Consensus 22 ~~s~dg~~~~~~~---d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 22 NWISGQEYLHQSA---DNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp EESSSSEEEEECT---TSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred EECCCCeEEEEcC---CCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 3899998777664 8999999999877655433 22 3899999999999999875 2445557899999997
Q ss_pred CcEE---EeeCCCCEEEEEEeeCCCceecccc
Q psy13461 73 GKII---KRFNSPTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 73 G~~l---~~~~~~~~~~~~wrP~~~~Lls~~~ 101 (194)
+..+ ..+ ...+..++|+|+|+.|++.+.
T Consensus 99 ~g~~~~~~~l-~~~~~~~~~SPDG~~la~~~~ 129 (719)
T 1z68_A 99 NGEFVRGNEL-PRPIQYLCWSPVGSKLAYVYQ 129 (719)
T ss_dssp TTEECCSSCC-CSSBCCEEECSSTTCEEEEET
T ss_pred CCccccceec-CcccccceECCCCCEEEEEEC
Confidence 5554 333 467889999999999998863
No 124
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.24 E-value=2.2e-11 Score=112.14 Aligned_cols=92 Identities=16% Similarity=0.214 Sum_probs=72.7
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCC---eEEeeecc-CceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDF---SVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 77 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~---~~i~~~~h-~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~ 77 (194)
|||||++||+++ +++|.+||+.++ .+.....| ..+.+++|||||++||+++ ++.+++||+.+....
T Consensus 116 ~SpDg~~l~~~~---~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-------~~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 116 WSPDAQRLLFPL---GGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-------GRNLWVIDLASGRQM 185 (741)
T ss_dssp ECTTSSEEEEEE---TTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-------TTEEEEEETTTTEEE
T ss_pred ECCCCCEEEEEe---CCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-------CCcEEEEecCCCCEE
Confidence 899999999998 599999999887 54333233 6799999999999999988 568999999755444
Q ss_pred eeC---CCC----------------EEEEEEeeCCCceecccchh
Q psy13461 78 RFN---SPT----------------FCQLRWRPRPASLLSKEQVD 103 (194)
Q Consensus 78 ~~~---~~~----------------~~~~~wrP~~~~Lls~~~~~ 103 (194)
... ... +..++|+|+|..|++++.+.
T Consensus 186 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 186 QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 432 111 47799999999999988664
No 125
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.22 E-value=1.3e-11 Score=113.66 Aligned_cols=93 Identities=12% Similarity=0.067 Sum_probs=70.9
Q ss_pred ccCCCCEEEEeecC-------CCCeEEEEECCCCeEEe--eeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec
Q psy13461 2 KCTMGTHIVLAELR-------DTGSLEFVDTGDFSVMN--AAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ 72 (194)
Q Consensus 2 fSP~G~~la~ag~~-------~dg~l~fwD~~~~~~i~--~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~ 72 (194)
|||||++||+++-. .+++|.+||+++++++. .. ...+.+++|||||++||+++ ++.+++|++.
T Consensus 67 ~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l-~~~~~~~~~SPDG~~la~~~-------~~~i~~~~~~ 138 (719)
T 1z68_A 67 LSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL-PRPIQYLCWSPVGSKLAYVY-------QNNIYLKQRP 138 (719)
T ss_dssp ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC-CSSBCCEEECSSTTCEEEEE-------TTEEEEESST
T ss_pred ECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec-CcccccceECCCCCEEEEEE-------CCeEEEEeCC
Confidence 89999999998720 15899999999887732 11 24688999999999999986 7899999995
Q ss_pred -CcEEEeeC---CCCE-----------------EEEEEeeCCCceecccch
Q psy13461 73 -GKIIKRFN---SPTF-----------------CQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 73 -G~~l~~~~---~~~~-----------------~~~~wrP~~~~Lls~~~~ 102 (194)
|....... ...+ ..++|+|+|+.|++++.+
T Consensus 139 ~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 139 GDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp TSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred CCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 54433221 1122 489999999999998865
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.22 E-value=9e-11 Score=100.53 Aligned_cols=103 Identities=12% Similarity=0.132 Sum_probs=79.6
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeec-cCceEEEEECCCCCEEEEeecCc---------ccccCCeEEEEee
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLW---------KTKADTGYWQWSF 71 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~-h~~vt~v~WsPdGr~lat~ss~~---------~~~~D~~~~IW~~ 71 (194)
|||+|++|++++. .++.|.+||+.+++++.... ...+.+++|+|+|++|++++... ....|+.+++||.
T Consensus 310 ~~~~g~~l~~~~~-~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~ 388 (433)
T 3bws_A 310 SGNTENKIYVSDM-CCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDT 388 (433)
T ss_dssp ECSSTTEEEEEET-TTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEET
T ss_pred ECCCCCEEEEEec-CCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEEC
Confidence 7999986655432 69999999999888776654 36799999999999999887521 0112579999999
Q ss_pred -cCcEEEeeC-CCCEEEEEEeeCCCceecccc-hhHH
Q psy13461 72 -QGKIIKRFN-SPTFCQLRWRPRPASLLSKEQ-VDKI 105 (194)
Q Consensus 72 -~G~~l~~~~-~~~~~~~~wrP~~~~Lls~~~-~~~I 105 (194)
+|+.+.... ...+..++|+|++..|++++. ++.|
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i 425 (433)
T 3bws_A 389 TTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQI 425 (433)
T ss_dssp TTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEE
T ss_pred CCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeE
Confidence 577777664 567999999999999987764 6655
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.21 E-value=2.4e-11 Score=106.64 Aligned_cols=92 Identities=8% Similarity=0.138 Sum_probs=64.3
Q ss_pred CccCC----CCEEEEeec------------------CCCCeEEEEECC-CCeEEee--eccCceEEEEECC---CCCEEE
Q psy13461 1 MKCTM----GTHIVLAEL------------------RDTGSLEFVDTG-DFSVMNA--AEHHQATDVEWDP---TGRYVM 52 (194)
Q Consensus 1 ~fSP~----G~~la~ag~------------------~~dg~l~fwD~~-~~~~i~~--~~h~~vt~v~WsP---dGr~la 52 (194)
+|||+ |+++|++|- +.|+.|++|++. +++.+.+ ++...++.++|+| +|.+||
T Consensus 118 a~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~La 197 (356)
T 2w18_A 118 FCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALL 197 (356)
T ss_dssp CC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEE
T ss_pred EECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEE
Confidence 47888 888887651 136777777763 3555443 3445677777777 667788
Q ss_pred EeecCcccccCCeEEEEeec-CcEEEeeC-----CCCEEEEEEeeCCCceec
Q psy13461 53 SGVSLWKTKADTGYWQWSFQ-GKIIKRFN-----SPTFCQLRWRPRPASLLS 98 (194)
Q Consensus 53 t~ss~~~~~~D~~~~IW~~~-G~~l~~~~-----~~~~~~~~wrP~~~~Lls 98 (194)
|++. |++++|||+. |++++++. ...++.++|+|+|..+++
T Consensus 198 SgS~------D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs 243 (356)
T 2w18_A 198 GTTI------MNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIV 243 (356)
T ss_dssp EEET------TSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEE
T ss_pred EecC------CCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEE
Confidence 8884 9999999995 99999874 346888899999998744
No 128
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.21 E-value=6.6e-12 Score=115.08 Aligned_cols=98 Identities=12% Similarity=0.140 Sum_probs=73.9
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEeeec-cC----ceEEEEECCCCCEEEEeecC---cccccCCeEEEEeec
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HH----QATDVEWDPTGRYVMSGVSL---WKTKADTGYWQWSFQ 72 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~-h~----~vt~v~WsPdGr~lat~ss~---~~~~~D~~~~IW~~~ 72 (194)
.|||||+++++ + .||+|.+||+.++++..... |. .|.+++|||||++||+++.. +++..++.++|||+.
T Consensus 23 ~~spdg~~~~~-~--~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~ 99 (723)
T 1xfd_A 23 KWISDTEFIYR-E--QKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIP 99 (723)
T ss_dssp CBSSSSCBCCC-C--SSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESS
T ss_pred EEcCCCcEEEE-e--CCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECC
Confidence 49999998876 4 58999999998876544332 22 49999999999999999753 233446889999996
Q ss_pred CcEEEeeC-----CCCEEEEEEeeCCCceecccc
Q psy13461 73 GKIIKRFN-----SPTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 73 G~~l~~~~-----~~~~~~~~wrP~~~~Lls~~~ 101 (194)
+..+..+. ...+..++|+|+|+.|++.+.
T Consensus 100 ~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~ 133 (723)
T 1xfd_A 100 HGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE 133 (723)
T ss_dssp SCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET
T ss_pred CCceEeccCCccccccccccEECCCCCEEEEEEC
Confidence 54333332 123888999999999999876
No 129
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.20 E-value=4.6e-11 Score=112.14 Aligned_cols=97 Identities=18% Similarity=0.310 Sum_probs=80.1
Q ss_pred ccCC--CCEEEEeecCCCCeEEEEECCCCe----EEeeeccCceEEEEECC-------------CCCEEEEeecCccccc
Q psy13461 2 KCTM--GTHIVLAELRDTGSLEFVDTGDFS----VMNAAEHHQATDVEWDP-------------TGRYVMSGVSLWKTKA 62 (194)
Q Consensus 2 fSP~--G~~la~ag~~~dg~l~fwD~~~~~----~i~~~~h~~vt~v~WsP-------------dGr~lat~ss~~~~~~ 62 (194)
|||+ |++|++|+ .||+|.+||+.+.. .....+...|++++|+| +|++|++|+.
T Consensus 107 ~sp~~~~~~l~sgs--~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~------ 178 (753)
T 3jro_A 107 WAPHEYGPLLLVAS--SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA------ 178 (753)
T ss_dssp ECCGGGCSEEEEEE--TTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEET------
T ss_pred ECCCCCCCEEEEEe--CCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEEC------
Confidence 7999 99999999 79999999988642 22234457899999999 5999999995
Q ss_pred CCeEEEEeec-C----cEEEeeC--CCCEEEEEEeeC---CCceecccchhHHH
Q psy13461 63 DTGYWQWSFQ-G----KIIKRFN--SPTFCQLRWRPR---PASLLSKEQVDKIK 106 (194)
Q Consensus 63 D~~~~IW~~~-G----~~l~~~~--~~~~~~~~wrP~---~~~Lls~~~~~~Ik 106 (194)
|+.++|||+. | .++.... ...|..++|+|+ +..|+|++.++.|+
T Consensus 179 dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~ 232 (753)
T 3jro_A 179 DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCI 232 (753)
T ss_dssp TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEE
T ss_pred CCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEE
Confidence 9999999995 4 3344433 678999999999 89999999998776
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.18 E-value=5.4e-11 Score=94.95 Aligned_cols=97 Identities=12% Similarity=0.022 Sum_probs=71.3
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCC-CeEEeee--cc-CceEEEEECCCCCEEEEeecCcccccCCeEEEEee--cCc
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGD-FSVMNAA--EH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF--QGK 74 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~-~~~i~~~--~h-~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~--~G~ 74 (194)
.|||+|++||+++ ++.|.+||+.+ ++..... ++ ..+++++|||+|++|++++.. .++...||.+ .+.
T Consensus 48 ~~spdg~~l~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~----~~~~~~l~~~~~~~~ 120 (297)
T 2ojh_A 48 NWSPDGKYLLLNS---EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKV----EFGKSAIYLLPSTGG 120 (297)
T ss_dssp EECTTSSEEEEEE---TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECT----TTSSCEEEEEETTCC
T ss_pred EECCCCCEEEEEc---CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeC----CCCcceEEEEECCCC
Confidence 3899999999987 78999999988 6654432 22 568999999999999999841 1334555554 555
Q ss_pred EEEeeC-CCCEEEEEEeeCCCcee-cccchhH
Q psy13461 75 IIKRFN-SPTFCQLRWRPRPASLL-SKEQVDK 104 (194)
Q Consensus 75 ~l~~~~-~~~~~~~~wrP~~~~Ll-s~~~~~~ 104 (194)
....+. ...+..+.|+|++..|+ +++.++.
T Consensus 121 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 152 (297)
T 2ojh_A 121 TPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQV 152 (297)
T ss_dssp CCEECCSSSSEEEEEECTTSSEEEEEEEETTE
T ss_pred ceEEeecCCCccceEECCCCCEEEEEECCCCc
Confidence 444443 55689999999999888 6666553
No 131
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.18 E-value=1e-10 Score=101.55 Aligned_cols=93 Identities=10% Similarity=0.174 Sum_probs=78.9
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee-----ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA-----EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKI 75 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~-----~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~ 75 (194)
++|+|++|++|+ .||.|.+||+.+++++... +...|++++|+ |++|++|+. |+.++|||+ +|++
T Consensus 325 ~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~------dg~v~iwd~~~~~~ 394 (445)
T 2ovr_B 325 MELKDNILVSGN--ADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSD------DGTVKLWDLKTGEF 394 (445)
T ss_dssp EEEETTEEEEEE--TTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEET------TSEEEEEETTTCCE
T ss_pred EEEeCCEEEEEe--CCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeC------CCeEEEEECCCCce
Confidence 467889999999 7999999999988776654 23679999996 589999995 999999999 5888
Q ss_pred EEee-------CCCCEEEEEEeeCCCceecccchhH
Q psy13461 76 IKRF-------NSPTFCQLRWRPRPASLLSKEQVDK 104 (194)
Q Consensus 76 l~~~-------~~~~~~~~~wrP~~~~Lls~~~~~~ 104 (194)
+..+ ....+++++|+|++..|++++.++.
T Consensus 395 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 395 IRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp EEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred eeeeeccccCCCCceEEEEEecCCEEEEEEcccCCC
Confidence 8766 1567999999999999999999886
No 132
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.17 E-value=3.1e-11 Score=110.60 Aligned_cols=95 Identities=12% Similarity=0.130 Sum_probs=70.6
Q ss_pred ccCCCCEEEEeecC-------CCCeEEEEECCCCeE--Eeee-cc-CceEEEEECCCCCEEEEeecCcccccCCeEEEEe
Q psy13461 2 KCTMGTHIVLAELR-------DTGSLEFVDTGDFSV--MNAA-EH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWS 70 (194)
Q Consensus 2 fSP~G~~la~ag~~-------~dg~l~fwD~~~~~~--i~~~-~h-~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~ 70 (194)
|||||++||+++-. .+++|.+||+.++++ +... .| ..+..++|||||++||+++ ++.+++|+
T Consensus 68 ~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~-------~~~i~~~~ 140 (723)
T 1xfd_A 68 ISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-------ENNIYYCA 140 (723)
T ss_dssp ECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-------TTEEEEES
T ss_pred ECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEE-------CCeEEEEE
Confidence 89999999998721 138899999998765 2221 12 3488999999999999998 57899999
Q ss_pred ec-CcEEEeeC--CC------------------CEEEEEEeeCCCceecccchh
Q psy13461 71 FQ-GKIIKRFN--SP------------------TFCQLRWRPRPASLLSKEQVD 103 (194)
Q Consensus 71 ~~-G~~l~~~~--~~------------------~~~~~~wrP~~~~Lls~~~~~ 103 (194)
.. |....... .. .+..++|+|+|..|++++.+.
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~ 194 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND 194 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECC
Confidence 96 44433222 22 237899999999999988653
No 133
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.16 E-value=1.3e-10 Score=112.48 Aligned_cols=101 Identities=14% Similarity=0.064 Sum_probs=77.9
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCc----ccccCCeEEEEeecCc
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLW----KTKADTGYWQWSFQGK 74 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~----~~~~D~~~~IW~~~G~ 74 (194)
.|||||++||+++ .+++|.+||+.++++.... +...+.+++|||||++||+++... ....++.+++||+.+.
T Consensus 385 ~~SpDG~~la~~~--~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g 462 (1045)
T 1k32_A 385 GVDRNGKFAVVAN--DRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR 462 (1045)
T ss_dssp EECTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT
T ss_pred EECCCCCEEEEEC--CCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC
Confidence 3899999999998 6899999999987765443 345689999999999999887520 0012358999999755
Q ss_pred EEEeeC--CCCEEEEEEeeCCCceecccchh
Q psy13461 75 IIKRFN--SPTFCQLRWRPRPASLLSKEQVD 103 (194)
Q Consensus 75 ~l~~~~--~~~~~~~~wrP~~~~Lls~~~~~ 103 (194)
.+..+. ...+..++|+|+|+.|++.+...
T Consensus 463 ~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~ 493 (1045)
T 1k32_A 463 KIFAATTENSHDYAPAFDADSKNLYYLSYRS 493 (1045)
T ss_dssp EEEECSCSSSBEEEEEECTTSCEEEEEESCC
T ss_pred cEEEeeCCCcccCCceEcCCCCEEEEEeccc
Confidence 555553 55688999999999999888643
No 134
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.15 E-value=1.3e-10 Score=100.86 Aligned_cols=93 Identities=13% Similarity=0.243 Sum_probs=79.5
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKR 78 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~ 78 (194)
++++|++||+|+ .||+|.+||+.+++++... |...|++++| +|++||||+. |+.++|||+ +|+++..
T Consensus 139 ~~~d~~~l~~g~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~------dg~i~vwd~~~~~~~~~ 208 (435)
T 1p22_A 139 LQYDDQKIVSGL--RDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSS------DSTVRVWDVNTGEMLNT 208 (435)
T ss_dssp EECCSSEEEEEE--SSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEET------TSCEEEEESSSCCEEEE
T ss_pred EEECCCEEEEEe--CCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcC------CCeEEEEECCCCcEEEE
Confidence 578999999999 7999999999988876654 4468999999 7899999995 999999999 4888877
Q ss_pred eC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 79 FN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 79 ~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+. ...+..+.|+| ..|++++.++.|+
T Consensus 209 ~~~h~~~v~~l~~~~--~~l~s~s~dg~i~ 236 (435)
T 1p22_A 209 LIHHCEAVLHLRFNN--GMMVTCSKDRSIA 236 (435)
T ss_dssp ECCCCSCEEEEECCT--TEEEEEETTSCEE
T ss_pred EcCCCCcEEEEEEcC--CEEEEeeCCCcEE
Confidence 64 67899999974 5999999998875
No 135
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.13 E-value=2.2e-10 Score=98.05 Aligned_cols=93 Identities=9% Similarity=-0.055 Sum_probs=77.6
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKR 78 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~ 78 (194)
|+|+|+++|+++ .+|.|.+||+.+++.+.+. +...+++++|+|+|++++++++ .|+.+++||+ +|+.+..
T Consensus 177 ~~~~~~~~~s~~--~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~i~~~d~~~~~~~~~ 249 (433)
T 3bws_A 177 IPEHNELWVSQM--QANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNW-----ISEDISVIDRKTKLEIRK 249 (433)
T ss_dssp EGGGTEEEEEEG--GGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEET-----TTTEEEEEETTTTEEEEE
T ss_pred EcCCCEEEEEEC--CCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEec-----CCCcEEEEECCCCcEEEE
Confidence 689999999998 6899999999987776654 3467999999999999966654 3899999998 5777776
Q ss_pred eC-CCCEEEEEEeeCCCceecccc
Q psy13461 79 FN-SPTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 79 ~~-~~~~~~~~wrP~~~~Lls~~~ 101 (194)
.. ...+..++|+|++..|++++.
T Consensus 250 ~~~~~~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 250 TDKIGLPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp CCCCSEEEEEEECTTSSEEEEEEE
T ss_pred ecCCCCceEEEEcCCCCEEEEEEC
Confidence 65 556999999999999998874
No 136
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.13 E-value=2.5e-10 Score=99.83 Aligned_cols=86 Identities=15% Similarity=0.131 Sum_probs=70.1
Q ss_pred ccCCCCEEEEeecC-CCCeEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEeecCcccccCC---eEEEEeecCcEEE
Q psy13461 2 KCTMGTHIVLAELR-DTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADT---GYWQWSFQGKIIK 77 (194)
Q Consensus 2 fSP~G~~la~ag~~-~dg~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~---~~~IW~~~G~~l~ 77 (194)
|||+|++|++++.. .++.|.+||+.++++.....+..+.+++|+|||++|++++. ++ .+++||++|+.+.
T Consensus 318 ~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~s~------~~~~~~l~~~d~~g~~~~ 391 (415)
T 2hqs_A 318 VSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSS------QGMGSVLNLVSTDGRFKA 391 (415)
T ss_dssp ECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEE------ETTEEEEEEEETTSCCEE
T ss_pred ECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCCCcCCeEEcCCCCEEEEEEc------CCCccEEEEEECCCCcEE
Confidence 89999999998742 13589999999877654444458999999999999999985 44 6899999999888
Q ss_pred eeC--CCCEEEEEEeeCC
Q psy13461 78 RFN--SPTFCQLRWRPRP 93 (194)
Q Consensus 78 ~~~--~~~~~~~~wrP~~ 93 (194)
.+. ...|.+++|+|--
T Consensus 392 ~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 392 RLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp ECCCSSSEEEEEEECCCC
T ss_pred EeeCCCCCCcCCcccccc
Confidence 875 4679999999954
No 137
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.12 E-value=2.1e-10 Score=104.56 Aligned_cols=96 Identities=9% Similarity=0.056 Sum_probs=81.3
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeec-cCceEEEEECCCCCEEEEeecCcccccCCeEEEEee---cCcEEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF---QGKIIK 77 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~-h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~---~G~~l~ 77 (194)
|||+|+++|+++ .+++|.+||..+++++.+.. +..+..++|||||++|++++. |+.+.+||+ +|+++.
T Consensus 145 ~~p~~~~~vs~~--~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~------d~~V~v~D~~~~t~~~~~ 216 (543)
T 1nir_A 145 LDLPNLFSVTLR--DAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGR------DARIDMIDLWAKEPTKVA 216 (543)
T ss_dssp CCGGGEEEEEEG--GGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEET------TSEEEEEETTSSSCEEEE
T ss_pred cCCCCEEEEEEc--CCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECC------CCeEEEEECcCCCCcEEE
Confidence 789999998887 68999999999998887754 445889999999999999995 899999999 578877
Q ss_pred eeC-CCCEEEEEEee----CCCceecccc-hhHH
Q psy13461 78 RFN-SPTFCQLRWRP----RPASLLSKEQ-VDKI 105 (194)
Q Consensus 78 ~~~-~~~~~~~~wrP----~~~~Lls~~~-~~~I 105 (194)
++. .....+++|+| +|+.|++++. +.+|
T Consensus 217 ~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v 250 (543)
T 1nir_A 217 EIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQF 250 (543)
T ss_dssp EEECCSEEEEEEECCSTTCTTTEEEEEEEESSEE
T ss_pred EEecCCCcceEEeCCCcCCCCCEEEEEEccCCeE
Confidence 775 55689999999 9999998875 3444
No 138
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.12 E-value=1.9e-11 Score=110.16 Aligned_cols=98 Identities=9% Similarity=-0.015 Sum_probs=70.9
Q ss_pred ccCCCCEEEEeecC--CCCeEEEEECCCCeEEeee-ccCceEEEEECCCCCEEEEeecCcccccCC--eEEEEeecCcEE
Q psy13461 2 KCTMGTHIVLAELR--DTGSLEFVDTGDFSVMNAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADT--GYWQWSFQGKII 76 (194)
Q Consensus 2 fSP~G~~la~ag~~--~dg~l~fwD~~~~~~i~~~-~h~~vt~v~WsPdGr~lat~ss~~~~~~D~--~~~IW~~~G~~l 76 (194)
|||||++||+++.. ..++|.+||+.+++..... +...+..++|||||++||++.. ++ .+++||+.|..+
T Consensus 157 ~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~------~~~~~i~~~d~~~~~~ 230 (582)
T 3o4h_A 157 SDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLET------AREARLVTVDPRDGSV 230 (582)
T ss_dssp EEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEEC------SSCEEEEEECTTTCCE
T ss_pred ECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccC------CCeeEEEEEcCCCCcE
Confidence 79999999987731 1178999998876654332 3356899999999999996553 66 789999975444
Q ss_pred EeeC--CCCEEEEE--------EeeCCCceecccchhHH
Q psy13461 77 KRFN--SPTFCQLR--------WRPRPASLLSKEQVDKI 105 (194)
Q Consensus 77 ~~~~--~~~~~~~~--------wrP~~~~Lls~~~~~~I 105 (194)
.... ...+..++ |+|+|..+++++.++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~ 269 (582)
T 3o4h_A 231 EDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRS 269 (582)
T ss_dssp EECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEE
T ss_pred EEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcE
Confidence 4332 23455566 99999888888877654
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.11 E-value=4.4e-10 Score=89.58 Aligned_cols=94 Identities=10% Similarity=0.095 Sum_probs=72.0
Q ss_pred ccCCCCEEE-EeecCCCCeEEEEEC--CCCeEEeee-ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee--cCcE
Q psy13461 2 KCTMGTHIV-LAELRDTGSLEFVDT--GDFSVMNAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF--QGKI 75 (194)
Q Consensus 2 fSP~G~~la-~ag~~~dg~l~fwD~--~~~~~i~~~-~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~--~G~~ 75 (194)
|||+|++|+ +++ .++.+.+|++ .+....... +...+.+++|+|+|++|++++. .++.+.||++ .+..
T Consensus 136 ~spdg~~l~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-----~~~~~~i~~~~~~~~~ 208 (297)
T 2ojh_A 136 WSPDGKSFTYCGI--RDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSS-----RTGQMQIWRVRVDGSS 208 (297)
T ss_dssp ECTTSSEEEEEEE--ETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEEC-----TTSSCEEEEEETTSSC
T ss_pred ECCCCCEEEEEEC--CCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEec-----CCCCccEEEECCCCCC
Confidence 899999888 555 5899999985 444443332 3367999999999999988774 3778899988 4666
Q ss_pred EEeeC--CCCEEEEEEeeCCCceecccch
Q psy13461 76 IKRFN--SPTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 76 l~~~~--~~~~~~~~wrP~~~~Lls~~~~ 102 (194)
+..+. ...+..+.|+|++..|++.+.+
T Consensus 209 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 209 VERITDSAYGDWFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp EEECCCCSEEEEEEEECTTSSEEEEEEEE
T ss_pred cEEEecCCcccCCeEECCCCCEEEEEEcC
Confidence 66554 4468899999999999988765
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.10 E-value=2.4e-10 Score=93.89 Aligned_cols=98 Identities=10% Similarity=0.028 Sum_probs=73.2
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECC--CCe--EEeee-ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-c---
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTG--DFS--VMNAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-Q--- 72 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~--~~~--~i~~~-~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~--- 72 (194)
|||+|++|++++. .++.|.+||++ +++ .+... .+..+.+++|+|+|++|++++. .++.+.+|++ +
T Consensus 45 ~spdg~~l~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-----~~~~i~~~d~~~~~~ 118 (343)
T 1ri6_A 45 VSPDKRYLYVGVR-PEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSY-----NAGNVSVTRLEDGLP 118 (343)
T ss_dssp ECTTSSEEEEEET-TTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEET-----TTTEEEEEEEETTEE
T ss_pred ECCCCCEEEEeec-CCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEec-----CCCeEEEEECCCCcc
Confidence 8999999999883 24999999987 443 33332 2347899999999999987774 3788999999 2
Q ss_pred CcEEEeeC-CCCEEEEEEeeCCCceeccc-chhHH
Q psy13461 73 GKIIKRFN-SPTFCQLRWRPRPASLLSKE-QVDKI 105 (194)
Q Consensus 73 G~~l~~~~-~~~~~~~~wrP~~~~Lls~~-~~~~I 105 (194)
+..+.... ...+..++|+|++..|++++ .+..|
T Consensus 119 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v 153 (343)
T 1ri6_A 119 VGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRI 153 (343)
T ss_dssp EEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEE
T ss_pred ccccccccCCCCceEEEECCCCCEEEEecCCCCEE
Confidence 33444443 45688999999999888776 55544
No 141
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.10 E-value=8.6e-11 Score=109.68 Aligned_cols=94 Identities=16% Similarity=0.203 Sum_probs=71.6
Q ss_pred ccCCCCEEEEeecCCC---------CeEEEEECCCCeEEeeec-cCceEEEEECCCCCEEEEeecCcccccCCeEEEEee
Q psy13461 2 KCTMGTHIVLAELRDT---------GSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF 71 (194)
Q Consensus 2 fSP~G~~la~ag~~~d---------g~l~fwD~~~~~~i~~~~-h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~ 71 (194)
|||||++||+++ .+ |.+.+||+.++++..... ...+..++|||||++||.++ |+.+++|+.
T Consensus 69 ~Spdg~~l~~~~--~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-------~~~i~~~~~ 139 (740)
T 4a5s_A 69 ISPDGQFILLEY--NYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-------NNDIYVKIE 139 (740)
T ss_dssp ECTTSSEEEEEE--EEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-------TTEEEEESS
T ss_pred ECCCCCEEEEEE--CCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-------CCeEEEEEC
Confidence 699999999987 22 778899999987654333 35799999999999999986 789999999
Q ss_pred cCcEEEeeC----CCCE-----------------EEEEEeeCCCceecccchhH
Q psy13461 72 QGKIIKRFN----SPTF-----------------CQLRWRPRPASLLSKEQVDK 104 (194)
Q Consensus 72 ~G~~l~~~~----~~~~-----------------~~~~wrP~~~~Lls~~~~~~ 104 (194)
.|.....+. ...+ ..+.|||||+.|+..+.+..
T Consensus 140 ~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~ 193 (740)
T 4a5s_A 140 PNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDT 193 (740)
T ss_dssp TTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECT
T ss_pred CCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEccc
Confidence 643333332 1222 24899999999999876644
No 142
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.10 E-value=3e-10 Score=98.51 Aligned_cols=93 Identities=14% Similarity=0.193 Sum_probs=78.3
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKR 78 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~ 78 (194)
++|+|++||+|+ .||+|++||+.+++++.+. |...|++++|+ |.+|+||+. |+.+++||+ +|+++..
T Consensus 125 ~~~~g~~l~sg~--~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~------dg~i~vwd~~~~~~~~~ 194 (445)
T 2ovr_B 125 LQFCGNRIVSGS--DDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGST------DRTLKVWNAETGECIHT 194 (445)
T ss_dssp EEEETTEEEEEE--TTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEET------TSCEEEEETTTTEEEEE
T ss_pred EEEcCCEEEEEE--CCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeC------CCeEEEEECCcCcEEEE
Confidence 578899999999 7999999999988877654 44789999998 669999995 999999999 4777777
Q ss_pred eC--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 79 FN--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 79 ~~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
+. ...|..+.|+ +..|++++.++.|+
T Consensus 195 ~~~h~~~v~~~~~~--~~~l~s~s~dg~i~ 222 (445)
T 2ovr_B 195 LYGHTSTVRCMHLH--EKRVVSGSRDATLR 222 (445)
T ss_dssp ECCCSSCEEEEEEE--TTEEEEEETTSEEE
T ss_pred ECCCCCcEEEEEec--CCEEEEEeCCCEEE
Confidence 64 6679999885 56899999998775
No 143
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.09 E-value=2.3e-10 Score=104.90 Aligned_cols=98 Identities=11% Similarity=0.142 Sum_probs=71.1
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCC-----CeEEee--eccCc--------------eEEEEECCCCCEEEEeecCcc-
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGD-----FSVMNA--AEHHQ--------------ATDVEWDPTGRYVMSGVSLWK- 59 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~-----~~~i~~--~~h~~--------------vt~v~WsPdGr~lat~ss~~~- 59 (194)
|||||++||.+. +++|.+||+.+ ++.... ..+.. +.+++|||||++||+++....
T Consensus 128 ~SpdG~~la~~~---~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~ 204 (706)
T 2z3z_A 128 FSPVGDRVAYVR---NHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSM 204 (706)
T ss_dssp ECTTSSEEEEEE---TTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTT
T ss_pred CCCCCCEEEEEE---CCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCC
Confidence 899999999975 89999999987 665432 22222 489999999999999872100
Q ss_pred --------------------------cccCCeEEEEeecCcEEEeeC-----CCCEEEEEEeeCCCceecccch
Q psy13461 60 --------------------------TKADTGYWQWSFQGKIIKRFN-----SPTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 60 --------------------------~~~D~~~~IW~~~G~~l~~~~-----~~~~~~~~wrP~~~~Lls~~~~ 102 (194)
...++.+++||+.+....... ...+..++|+|+|..|++.+.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 278 (706)
T 2z3z_A 205 VKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVN 278 (706)
T ss_dssp SCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEEC
T ss_pred CceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeC
Confidence 012467999999755443332 2458899999999999887654
No 144
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.06 E-value=8.1e-10 Score=91.11 Aligned_cols=95 Identities=9% Similarity=0.037 Sum_probs=75.5
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEeeec-cC--ceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-CcEE
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HH--QATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKII 76 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~-h~--~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~~l 76 (194)
+++|+|+++|+++ .+++|.+||+.+++.+.+.. +. .+..++|+|+|++++.++. .++.+.+||.. |+.+
T Consensus 6 ~~~~~~~~~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~-----~~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 6 ALKAGHEYMIVTN--YPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN-----HYGDIYGIDLDTCKNT 78 (349)
T ss_dssp CCCTTCEEEEEEE--TTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET-----TTTEEEEEETTTTEEE
T ss_pred cccCCCEEEEEeC--CCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeC-----CCCcEEEEeCCCCcEE
Confidence 5789999999998 69999999999988776543 23 5889999999998766654 37899999995 7766
Q ss_pred EeeCCCC--------EEEEEEeeCCCceecccch
Q psy13461 77 KRFNSPT--------FCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 77 ~~~~~~~--------~~~~~wrP~~~~Lls~~~~ 102 (194)
....... +..++|+|+|..|++++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 112 (349)
T 1jmx_B 79 FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNP 112 (349)
T ss_dssp EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEE
T ss_pred EEEEcccccccccccccceEECCCCCEEEEEccc
Confidence 6554222 6789999999999988754
No 145
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.04 E-value=7.9e-10 Score=95.92 Aligned_cols=92 Identities=18% Similarity=0.269 Sum_probs=78.2
Q ss_pred cCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-CcEEEee
Q psy13461 3 CTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIKRF 79 (194)
Q Consensus 3 SP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~~l~~~ 79 (194)
+++|++|++|+ .||+|.+||+.+++++.+. +...|++++| +|++|++|+. |+.++|||+. |+++..+
T Consensus 263 ~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~------dg~i~iwd~~~~~~~~~~ 332 (435)
T 1p22_A 263 DFDDKYIVSAS--GDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSS------DNTIRLWDIECGACLRVL 332 (435)
T ss_dssp EEETTEEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEET------TSCEEEEETTTCCEEEEE
T ss_pred EeCCCEEEEEe--CCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeC------CCeEEEEECCCCCEEEEE
Confidence 45789999999 7999999999988877654 3467999999 5789999995 9999999995 8888877
Q ss_pred C--CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 80 N--SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 80 ~--~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
. ...+..++| +|..|++++.++.|+
T Consensus 333 ~~h~~~v~~~~~--~~~~l~sg~~dg~i~ 359 (435)
T 1p22_A 333 EGHEELVRCIRF--DNKRIVSGAYDGKIK 359 (435)
T ss_dssp CCCSSCEEEEEC--CSSEEEEEETTSCEE
T ss_pred eCCcCcEEEEEe--cCCEEEEEeCCCcEE
Confidence 5 667999998 788999999998875
No 146
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.03 E-value=1.3e-09 Score=91.88 Aligned_cols=95 Identities=14% Similarity=0.156 Sum_probs=70.1
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeE--Eeee-----ccCceEEEEECCCCCEEEEeecCccccc-CCeEEEEeec
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSV--MNAA-----EHHQATDVEWDPTGRYVMSGVSLWKTKA-DTGYWQWSFQ 72 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~--i~~~-----~h~~vt~v~WsPdGr~lat~ss~~~~~~-D~~~~IW~~~ 72 (194)
.|||+|++|++++. .++.|.+||++++++ +... +.....+++|||||++|+++.. . ++.+.||+++
T Consensus 217 ~~spdg~~l~v~~~-~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~-----~~~~~i~v~~~~ 290 (361)
T 3scy_A 217 IFNSDGKFAYLINE-IGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR-----LKADGVAIFKVD 290 (361)
T ss_dssp EECTTSSEEEEEET-TTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC-----SSSCEEEEEEEC
T ss_pred EEcCCCCEEEEEcC-CCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC-----CCCCEEEEEEEc
Confidence 38999998887764 489999999886654 2221 1234689999999999977764 3 5789999994
Q ss_pred ---CcE--EEeeC-CCCEEEEEEeeCCCceecccc
Q psy13461 73 ---GKI--IKRFN-SPTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 73 ---G~~--l~~~~-~~~~~~~~wrP~~~~Lls~~~ 101 (194)
|.+ +.... ......++|+|++..|+++..
T Consensus 291 ~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 291 ETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp TTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEET
T ss_pred CCCCcEEEeeEecCCCCCceEEECCCCCEEEEEEC
Confidence 553 33333 346779999999998888764
No 147
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.02 E-value=8.2e-10 Score=103.05 Aligned_cols=97 Identities=8% Similarity=0.104 Sum_probs=73.6
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEee--ecc---Cce--EEEEECCCCCEEEEeecC---cccccCCeEEEEe
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNA--AEH---HQA--TDVEWDPTGRYVMSGVSL---WKTKADTGYWQWS 70 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~--~~h---~~v--t~v~WsPdGr~lat~ss~---~~~~~D~~~~IW~ 70 (194)
+|||+|++|+++ +|+|.+||+.++++... .+. ..+ .+++|||||++||.++.. |++...+.|.|||
T Consensus 23 ~w~~dg~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d 98 (740)
T 4a5s_A 23 RWISDHEYLYKQ----ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD 98 (740)
T ss_dssp EECSSSEEEEEE----TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred EECCCCcEEEEc----CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEE
Confidence 489999999885 68999999988765433 222 122 458999999999998852 3444557788999
Q ss_pred ecCcEEEeeC--CCCEEEEEEeeCCCceecccc
Q psy13461 71 FQGKIIKRFN--SPTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 71 ~~G~~l~~~~--~~~~~~~~wrP~~~~Lls~~~ 101 (194)
+.+..+..+. ...+...+|||+|+.|+..+.
T Consensus 99 ~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~ 131 (740)
T 4a5s_A 99 LNKRQLITEERIPNNTQWVTWSPVGHKLAYVWN 131 (740)
T ss_dssp TTTTEECCSSCCCTTEEEEEECSSTTCEEEEET
T ss_pred CCCCcEEEcccCCCcceeeEECCCCCEEEEEEC
Confidence 9766665553 467999999999999998754
No 148
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.01 E-value=1.5e-09 Score=88.93 Aligned_cols=98 Identities=13% Similarity=0.035 Sum_probs=71.9
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeecc-C------ceEEEEECCCCCEEEEeecCc----ccc--cCCeEEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH-H------QATDVEWDPTGRYVMSGVSLW----KTK--ADTGYWQ 68 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h-~------~vt~v~WsPdGr~lat~ss~~----~~~--~D~~~~I 68 (194)
|||+|+++++++. .++.|.+||+.+++.+..... . .+.+++|||+|++|++++... ... .++.+.+
T Consensus 41 ~s~dg~~l~v~~~-~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v 119 (337)
T 1pby_B 41 VAPGGRIAYATVN-KSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVAL 119 (337)
T ss_dssp ECTTSSEEEEEET-TTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEE
T ss_pred EcCCCCEEEEEeC-CCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEE
Confidence 7999987765543 478999999998776654321 1 578899999999998886210 000 3789999
Q ss_pred Eeec-CcEEEeeC-CCCEEEEEEeeCCCceeccc
Q psy13461 69 WSFQ-GKIIKRFN-SPTFCQLRWRPRPASLLSKE 100 (194)
Q Consensus 69 W~~~-G~~l~~~~-~~~~~~~~wrP~~~~Lls~~ 100 (194)
||.. |+.+.... ...+..++|+|++..|+.++
T Consensus 120 ~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 153 (337)
T 1pby_B 120 YDAETLSRRKAFEAPRQITMLAWARDGSKLYGLG 153 (337)
T ss_dssp EETTTTEEEEEEECCSSCCCEEECTTSSCEEEES
T ss_pred EECCCCcEEEEEeCCCCcceeEECCCCCEEEEeC
Confidence 9995 56665554 45678899999999888773
No 149
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.00 E-value=3.6e-10 Score=101.81 Aligned_cols=98 Identities=9% Similarity=0.049 Sum_probs=67.9
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEeeC-
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRFN- 80 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~~- 80 (194)
|||+|+.++.++. .++.+.+||++++++.....+.. .+++|||||++||+++... .....+++||+.+..+..+.
T Consensus 117 ~s~dg~~~~~~s~-~~~~~~l~d~~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~~--~~~~~i~~~d~~~g~~~~l~~ 192 (582)
T 3o4h_A 117 GVDTGEAVVFTGA-TEDRVALYALDGGGLRELARLPG-FGFVSDIRGDLIAGLGFFG--GGRVSLFTSNLSSGGLRVFDS 192 (582)
T ss_dssp EEECSSCEEEEEE-CSSCEEEEEEETTEEEEEEEESS-CEEEEEEETTEEEEEEEEE--TTEEEEEEEETTTCCCEEECC
T ss_pred eCCCCCeEEEEec-CCCCceEEEccCCcEEEeecCCC-ceEEECCCCCEEEEEEEcC--CCCeEEEEEcCCCCCceEeec
Confidence 7899975443322 34556699998877554433333 8899999999999887510 01156899998644444443
Q ss_pred -CCCEEEEEEeeCCCceecccchh
Q psy13461 81 -SPTFCQLRWRPRPASLLSKEQVD 103 (194)
Q Consensus 81 -~~~~~~~~wrP~~~~Lls~~~~~ 103 (194)
...+..++|+|+|+.|++++.++
T Consensus 193 ~~~~~~~~~~SpDG~~l~~~~~~~ 216 (582)
T 3o4h_A 193 GEGSFSSASISPGMKVTAGLETAR 216 (582)
T ss_dssp SSCEEEEEEECTTSCEEEEEECSS
T ss_pred CCCccccceECCCCCEEEEccCCC
Confidence 45689999999999999766655
No 150
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.00 E-value=2.3e-09 Score=97.70 Aligned_cols=97 Identities=10% Similarity=0.152 Sum_probs=78.3
Q ss_pred ccCCCCEEEEeecCCCCeEEEEEC--CCCeEEeeec-cCceEEEEECC----CCCEEEEeecCcccccCCeEEEEee-cC
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDT--GDFSVMNAAE-HHQATDVEWDP----TGRYVMSGVSLWKTKADTGYWQWSF-QG 73 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~--~~~~~i~~~~-h~~vt~v~WsP----dGr~lat~ss~~~~~~D~~~~IW~~-~G 73 (194)
|||+|++|++++ .+++|.+||+ .+++++.+.. +..+.+++||| ||++|++++. .+++|.|||. ++
T Consensus 186 ~spdg~~l~v~~--~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~-----~~~~v~v~D~~t~ 258 (543)
T 1nir_A 186 MSASGRYLLVIG--RDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAY-----WPPQFAIMDGETL 258 (543)
T ss_dssp ECTTSCEEEEEE--TTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEE-----ESSEEEEEETTTC
T ss_pred ECCCCCEEEEEC--CCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEc-----cCCeEEEEecccc
Confidence 899999999999 6899999999 7888877654 45689999999 9999999985 4899999998 57
Q ss_pred cEEEeeCC-------------CCEEEEEEeeCCCc-eecccchhHH
Q psy13461 74 KIIKRFNS-------------PTFCQLRWRPRPAS-LLSKEQVDKI 105 (194)
Q Consensus 74 ~~l~~~~~-------------~~~~~~~wrP~~~~-Lls~~~~~~I 105 (194)
+++..... ..+..+.++|+++. +++...+++|
T Consensus 259 ~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i 304 (543)
T 1nir_A 259 EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKV 304 (543)
T ss_dssp CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeE
Confidence 87776542 26889999997654 4555555555
No 151
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.99 E-value=3e-09 Score=87.79 Aligned_cols=94 Identities=14% Similarity=0.140 Sum_probs=70.6
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeE-Eeee-ccCceEE-EEECCCCCEEEEeecCcccccC-C--eEEEEeec-C
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSV-MNAA-EHHQATD-VEWDPTGRYVMSGVSLWKTKAD-T--GYWQWSFQ-G 73 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~-i~~~-~h~~vt~-v~WsPdGr~lat~ss~~~~~~D-~--~~~IW~~~-G 73 (194)
.|||+|++|++++. .++.|.+||..+++. .... .+..... ++|||+|++|+++.. + + .+.+||.. |
T Consensus 46 ~~s~dg~~l~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~------~~~~~~i~v~d~~~~ 118 (331)
T 3u4y_A 46 AITSDCSNVVVTSD-FCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTG------LNHPFNMQSYSFLKN 118 (331)
T ss_dssp EECSSSCEEEEEES-TTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCC------SSSSCEEEEEETTTT
T ss_pred EEcCCCCEEEEEeC-CCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecC------CCCcccEEEEECCCC
Confidence 38999998888774 378999999988765 3332 3444555 999999999995442 3 3 89999995 6
Q ss_pred cEEEeeC-CCCEEEEEEeeCCCceecccc
Q psy13461 74 KIIKRFN-SPTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 74 ~~l~~~~-~~~~~~~~wrP~~~~Lls~~~ 101 (194)
+.+.... ......++|+|+|..|+.+..
T Consensus 119 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 147 (331)
T 3u4y_A 119 KFISTIPIPYDAVGIAISPNGNGLILIDR 147 (331)
T ss_dssp EEEEEEECCTTEEEEEECTTSSCEEEEEE
T ss_pred CeEEEEECCCCccceEECCCCCEEEEEec
Confidence 6666654 566799999999987766544
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.97 E-value=3.3e-09 Score=88.59 Aligned_cols=96 Identities=11% Similarity=0.141 Sum_probs=68.6
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCC--CeE--Eeeec--------cCceEEEEECCCCCEEEEeecCcccccCCeEEE
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGD--FSV--MNAAE--------HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQ 68 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~--~~~--i~~~~--------h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~I 68 (194)
.|||+|++|++++. .++.|.+||++. ++. +.... ...+..++|||||++|+++.. .++.+.+
T Consensus 193 ~~spdg~~l~v~~~-~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~-----~~~~v~v 266 (347)
T 3hfq_A 193 VFSPDGQYAFLAGE-LSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR-----GYNTLAV 266 (347)
T ss_dssp EECTTSSEEEEEET-TTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEE-----TTTEEEE
T ss_pred EECCCCCEEEEEeC-CCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeC-----CCCEEEE
Confidence 38999998777654 478999999773 443 22211 135889999999999865553 3889999
Q ss_pred Eeec--Cc--EEEeeC--CCCEEEEEEeeCCCceecccch
Q psy13461 69 WSFQ--GK--IIKRFN--SPTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 69 W~~~--G~--~l~~~~--~~~~~~~~wrP~~~~Lls~~~~ 102 (194)
|++. |. .+.... ......++|+|++..|+++...
T Consensus 267 ~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 306 (347)
T 3hfq_A 267 FAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQN 306 (347)
T ss_dssp EEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETT
T ss_pred EEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcC
Confidence 9985 43 333333 3457899999999988887654
No 153
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.96 E-value=3.2e-09 Score=87.10 Aligned_cols=98 Identities=7% Similarity=0.145 Sum_probs=71.4
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECC---CCeEEeee-ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec--CcE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTG---DFSVMNAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ--GKI 75 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~---~~~~i~~~-~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~--G~~ 75 (194)
|||+|++|++++. .++.|.+||++ ..+.+... .+..+.+++|+|+|++|++++. .++.+.+|++. |++
T Consensus 91 ~s~dg~~l~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-----~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 91 TDHQGQFVFVGSY-NAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPAL-----KQDRICLFTVSDDGHL 164 (343)
T ss_dssp ECTTSSEEEEEET-TTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEG-----GGTEEEEEEECTTSCE
T ss_pred EcCCCCEEEEEec-CCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecC-----CCCEEEEEEecCCCce
Confidence 7999998888774 48899999993 33444443 3456899999999999988874 38899999995 554
Q ss_pred EE------eeC-CCCEEEEEEeeCCCceeccc-chhHH
Q psy13461 76 IK------RFN-SPTFCQLRWRPRPASLLSKE-QVDKI 105 (194)
Q Consensus 76 l~------~~~-~~~~~~~~wrP~~~~Lls~~-~~~~I 105 (194)
.. ... ......++|+|++..|+..+ ....|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i 202 (343)
T 1ri6_A 165 VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSV 202 (343)
T ss_dssp EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred eeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEE
Confidence 32 122 34788999999999775443 44444
No 154
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.96 E-value=1e-09 Score=100.53 Aligned_cols=89 Identities=16% Similarity=0.108 Sum_probs=69.0
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeecc-CceEEEEECCCCCEEEEeecCcccccCCeEEEEeecC------c
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQG------K 74 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h-~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G------~ 74 (194)
|||+ ++++.+. +++|.+||+.++++.....+ ..+.+++|||||++||++. |+.+++|++.+ +
T Consensus 89 ~spd-~~~~~~~---~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~-------~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 89 DAGR-GLVVLFT---QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVR-------NHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp ETTT-TEEEEEE---TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEE-------TTEEEEEECBCTTSCCCC
T ss_pred ECCC-CeEEEEE---CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEE-------CCeEEEEecCcccccCCC
Confidence 8999 6666665 69999999998876554333 5688999999999999964 88999999964 4
Q ss_pred EEEeeC--CCC--------------EEEEEEeeCCCceecccc
Q psy13461 75 IIKRFN--SPT--------------FCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 75 ~l~~~~--~~~--------------~~~~~wrP~~~~Lls~~~ 101 (194)
...... ... +..+.|+|+|..|++++.
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~ 200 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRM 200 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEE
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEE
Confidence 443222 222 478999999999999873
No 155
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.95 E-value=4.2e-09 Score=87.14 Aligned_cols=95 Identities=12% Similarity=0.087 Sum_probs=73.8
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-CcEEEeeC
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIKRFN 80 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~~l~~~~ 80 (194)
|||+|++|++++. .++.|.+||..+++.+..........++|+|+|++++.+.. .++.+.+||.. |+.+....
T Consensus 238 ~s~dg~~l~~~~~-~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~-----~~~~v~~~d~~~~~~~~~~~ 311 (353)
T 3vgz_A 238 LDTARQRAFITDS-KAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHR-----QAGKVSVIDAKSYKVVKTFD 311 (353)
T ss_dssp EETTTTEEEEEES-SSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEET-----TTTEEEEEETTTTEEEEEEE
T ss_pred ECCCCCEEEEEeC-CCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEEC-----CCCeEEEEECCCCeEEEEEe
Confidence 7999998877763 36999999999888766544333467999999997766664 38999999994 77777665
Q ss_pred -CCCEEEEEEeeCCCceecccch
Q psy13461 81 -SPTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 81 -~~~~~~~~wrP~~~~Lls~~~~ 102 (194)
......++|+|++..|+.....
T Consensus 312 ~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 312 TPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp CCSEEEEEEECTTSCEEEEEEEC
T ss_pred cCCCCCeEEEcCCCCEEEEEEcc
Confidence 5578999999999977665544
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.95 E-value=8.5e-09 Score=86.73 Aligned_cols=94 Identities=10% Similarity=0.173 Sum_probs=67.8
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCC--C----e-E--------EeeeccCceEEEEECCCCCEEEEeecCcccccCCeE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGD--F----S-V--------MNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGY 66 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~--~----~-~--------i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~ 66 (194)
|||+|++|++++. .++.|.+|+++. + + + ..........+++|||||++|++++. .++.+
T Consensus 162 ~spdg~~l~~~~~-~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~-----~~~~v 235 (361)
T 3scy_A 162 ITPDGKYLLADDL-GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINE-----IGGTV 235 (361)
T ss_dssp ECTTSSEEEEEET-TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET-----TTCEE
T ss_pred ECCCCCEEEEEeC-CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcC-----CCCeE
Confidence 8999998888775 488999998774 2 1 1 11223456889999999999888774 48899
Q ss_pred EEEeec-CcE--EEeeC-----CCCEEEEEEeeCCCceecccc
Q psy13461 67 WQWSFQ-GKI--IKRFN-----SPTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 67 ~IW~~~-G~~--l~~~~-----~~~~~~~~wrP~~~~Lls~~~ 101 (194)
.+|++. |.+ +.... ......++|+|+|+.|+....
T Consensus 236 ~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~ 278 (361)
T 3scy_A 236 IAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR 278 (361)
T ss_dssp EEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC
T ss_pred EEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC
Confidence 999995 443 22221 244679999999998855443
No 157
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.95 E-value=8e-09 Score=86.28 Aligned_cols=92 Identities=10% Similarity=0.200 Sum_probs=65.5
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECC---CCeEEeeecc-----------CceEEEEECCCCCEEEEeecCcccccCCeE
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTG---DFSVMNAAEH-----------HQATDVEWDPTGRYVMSGVSLWKTKADTGY 66 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~---~~~~i~~~~h-----------~~vt~v~WsPdGr~lat~ss~~~~~~D~~~ 66 (194)
.|||+|++|++++. .+++|.+||++ ....+....+ ..+.+++|||||++++++. .++.+
T Consensus 92 a~spdg~~l~~~~~-~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~------~~~~v 164 (347)
T 3hfq_A 92 AVDEARQLVYSANY-HKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDL------GSDKV 164 (347)
T ss_dssp EEETTTTEEEEEET-TTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEET------TTTEE
T ss_pred EECCCCCEEEEEeC-CCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeC------CCCEE
Confidence 37999999988875 47999999986 3333333221 2378899999999555554 37889
Q ss_pred EEEeec--CcEEEe----eC-CCCEEEEEEeeCCCceecc
Q psy13461 67 WQWSFQ--GKIIKR----FN-SPTFCQLRWRPRPASLLSK 99 (194)
Q Consensus 67 ~IW~~~--G~~l~~----~~-~~~~~~~~wrP~~~~Lls~ 99 (194)
.+|++. |.+... .. ......++|+|+|..|+..
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~ 204 (347)
T 3hfq_A 165 YVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLA 204 (347)
T ss_dssp EEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred EEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEE
Confidence 999996 554321 11 3467889999999966654
No 158
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.94 E-value=6.4e-09 Score=85.79 Aligned_cols=97 Identities=7% Similarity=0.062 Sum_probs=69.9
Q ss_pred ccCCCCEEEEeecCCC-C--eEEEEECCCCeEEeeec-cCceEEEEECCCCCEEEEeecCcccccCCe-EEEEeec--Cc
Q psy13461 2 KCTMGTHIVLAELRDT-G--SLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTG-YWQWSFQ--GK 74 (194)
Q Consensus 2 fSP~G~~la~ag~~~d-g--~l~fwD~~~~~~i~~~~-h~~vt~v~WsPdGr~lat~ss~~~~~~D~~-~~IW~~~--G~ 74 (194)
|||+|++|+++. .+ + .|.+||+.+++.+.... +....+++|||||++|++++. .++. +.+|++. |.
T Consensus 91 ~s~dg~~l~~~~--~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~-----~~~~~i~~~~~~~~g~ 163 (331)
T 3u4y_A 91 ITPDDQFAVTVT--GLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDR-----SSANTVRRFKIDADGV 163 (331)
T ss_dssp ECTTSSEEEECC--CSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEE-----TTTTEEEEEEECTTCC
T ss_pred ECCCCCEEEEec--CCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEec-----CCCceEEEEEECCCCc
Confidence 799999999544 23 3 99999999888776643 456799999999997776654 3577 9999985 33
Q ss_pred EEE----eeC-CCCEEEEEEeeCCCcee-cccchhHH
Q psy13461 75 IIK----RFN-SPTFCQLRWRPRPASLL-SKEQVDKI 105 (194)
Q Consensus 75 ~l~----~~~-~~~~~~~~wrP~~~~Ll-s~~~~~~I 105 (194)
+.. ... ......++|+|++..|+ ++.....|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 200 (331)
T 3u4y_A 164 LFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSI 200 (331)
T ss_dssp EEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEE
T ss_pred EeecCCccccCCCCccceEECCCCCEEEEEeCCCCeE
Confidence 321 112 45689999999999654 44444444
No 159
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.94 E-value=2.4e-09 Score=89.14 Aligned_cols=100 Identities=14% Similarity=0.287 Sum_probs=66.1
Q ss_pred CccCCCCEEEEeecCC-CC--eEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEeecCcc------------------
Q psy13461 1 MKCTMGTHIVLAELRD-TG--SLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWK------------------ 59 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~-dg--~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~------------------ 59 (194)
.|||||++||.++... ++ .|.+||+.+++......+..+..++|||||++||.++....
T Consensus 65 ~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~ 144 (347)
T 2gop_A 65 RISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDL 144 (347)
T ss_dssp EECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSEEEEEEECCCC---------CCCC----
T ss_pred EECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCCccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCc
Confidence 3899999999876311 13 47788888776544322222999999999999998874200
Q ss_pred ---cccCCeEEEEeecCcEE-EeeCCCCEEEEEEeeCCCceecccc
Q psy13461 60 ---TKADTGYWQWSFQGKII-KRFNSPTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 60 ---~~~D~~~~IW~~~G~~l-~~~~~~~~~~~~wrP~~~~Lls~~~ 101 (194)
....+.+.+||+.+..+ ..+....+..+.|+|+| .+++++.
T Consensus 145 ~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg-~~~~~~~ 189 (347)
T 2gop_A 145 GFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDK-IVVNVPH 189 (347)
T ss_dssp -----CEEEEEEEETTTTEEEEEEEEETTCEEEEETTE-EEEEEEC
T ss_pred ccccCccceEEEEECCCCeEEeeecCCCcccccCCCCe-EEEEEec
Confidence 00124688899864433 33321278899999999 7776654
No 160
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.91 E-value=6.7e-09 Score=85.86 Aligned_cols=97 Identities=15% Similarity=0.239 Sum_probs=74.9
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee------ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCc
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA------EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGK 74 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~------~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~ 74 (194)
|||+|++|++++ .++.|.+||+.+++.+... +...+..++|+|+|++|++++. .++.+.+||. .|+
T Consensus 192 ~s~dg~~l~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-----~~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 192 LDSEGKRLYTTN--ADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS-----KAAEVLVVDTRNGN 264 (353)
T ss_dssp EETTTTEEEEEC--TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES-----SSSEEEEEETTTCC
T ss_pred ECCCCCEEEEEc--CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC-----CCCEEEEEECCCCc
Confidence 799999999988 6899999999988776542 2245788999999998887774 3689999999 577
Q ss_pred EEEeeCCCCEEEEEEeeCCCcee-cccchhHH
Q psy13461 75 IIKRFNSPTFCQLRWRPRPASLL-SKEQVDKI 105 (194)
Q Consensus 75 ~l~~~~~~~~~~~~wrP~~~~Ll-s~~~~~~I 105 (194)
.+.......-..++|+|++..|+ +...++.|
T Consensus 265 ~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v 296 (353)
T 3vgz_A 265 ILAKVAAPESLAVLFNPARNEAYVTHRQAGKV 296 (353)
T ss_dssp EEEEEECSSCCCEEEETTTTEEEEEETTTTEE
T ss_pred EEEEEEcCCCceEEECCCCCEEEEEECCCCeE
Confidence 77776544446799999999554 44445544
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.91 E-value=1.3e-08 Score=86.62 Aligned_cols=94 Identities=12% Similarity=0.041 Sum_probs=69.6
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECC-CCeEE--eee----ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec--
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTG-DFSVM--NAA----EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-- 72 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~-~~~~i--~~~----~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-- 72 (194)
|||+|++|++++. .++.|.+||++ ++++. ... +...+.+++|||||++|++++. .++.+.+|+++
T Consensus 152 ~spdG~~l~~~~~-~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~-----~~~~v~v~~~~~~ 225 (365)
T 1jof_A 152 FDPTETYLYSADL-TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME-----AGNRICEYVIDPA 225 (365)
T ss_dssp ECTTSSEEEEEET-TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET-----TTTEEEEEEECTT
T ss_pred ECCCCCEEEEEcC-CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEEC-----CCCeEEEEEEeCC
Confidence 8999999988875 36899999998 66542 222 1356899999999999988774 47899999874
Q ss_pred -CcEEE---e---eCC-----C-------CEEEEE-EeeCCCceecccc
Q psy13461 73 -GKIIK---R---FNS-----P-------TFCQLR-WRPRPASLLSKEQ 101 (194)
Q Consensus 73 -G~~l~---~---~~~-----~-------~~~~~~-wrP~~~~Lls~~~ 101 (194)
|++.. . .+. . ....++ |+|+|+.|+++..
T Consensus 226 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~ 274 (365)
T 1jof_A 226 THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR 274 (365)
T ss_dssp TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred CCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECC
Confidence 66532 1 221 1 478999 9999998876653
No 162
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.90 E-value=4.3e-09 Score=86.68 Aligned_cols=97 Identities=12% Similarity=0.044 Sum_probs=67.5
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeec--c------CceEEEEECCCCCEEEEeecCc-----cc-ccCCeEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--H------HQATDVEWDPTGRYVMSGVSLW-----KT-KADTGYW 67 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~--h------~~vt~v~WsPdGr~lat~ss~~-----~~-~~D~~~~ 67 (194)
|||+|+++++++. .++.|.+||+.+++.+.... + ..+..++|||||++|++++... .. ..++.+.
T Consensus 50 ~s~dg~~~~v~~~-~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~ 128 (349)
T 1jmx_B 50 MAPDNRTAYVLNN-HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLE 128 (349)
T ss_dssp ECTTSSEEEEEET-TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEE
T ss_pred ECCCCCEEEEEeC-CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEE
Confidence 7999997765543 58999999999887765432 1 2278999999999999988410 00 0137899
Q ss_pred EEeec-CcEE---EeeC-CCCEEEEEEeeCCCceeccc
Q psy13461 68 QWSFQ-GKII---KRFN-SPTFCQLRWRPRPASLLSKE 100 (194)
Q Consensus 68 IW~~~-G~~l---~~~~-~~~~~~~~wrP~~~~Lls~~ 100 (194)
+||+. |+.. .... ...+..++|+|++. |+..+
T Consensus 129 ~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~ 165 (349)
T 1jmx_B 129 VFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAG 165 (349)
T ss_dssp EEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEES
T ss_pred EEECCCccccceeeeccCCCcccceeECCCCc-EEEcc
Confidence 99985 3322 2222 34688899999999 55544
No 163
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.89 E-value=2.7e-09 Score=98.91 Aligned_cols=102 Identities=12% Similarity=0.057 Sum_probs=70.4
Q ss_pred ccCCCCEEEEeecC---CCCeEEEEECCCCeEEeeeccCce--EEEEECCCCCEEEEeecCcc-------cccCCeEEEE
Q psy13461 2 KCTMGTHIVLAELR---DTGSLEFVDTGDFSVMNAAEHHQA--TDVEWDPTGRYVMSGVSLWK-------TKADTGYWQW 69 (194)
Q Consensus 2 fSP~G~~la~ag~~---~dg~l~fwD~~~~~~i~~~~h~~v--t~v~WsPdGr~lat~ss~~~-------~~~D~~~~IW 69 (194)
|||||++||.+.-. .+.+|.+||+.+++.+...+...+ ..++|||||+.|+.++.... ......+++|
T Consensus 128 ~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~ 207 (695)
T 2bkl_A 128 VSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYH 207 (695)
T ss_dssp ECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEE
T ss_pred ECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEE
Confidence 89999999854321 346899999998876511111223 78999999999999885110 0011239999
Q ss_pred eec-Cc----EEEeeC--CCCEEEEEEeeCCCceecccchh
Q psy13461 70 SFQ-GK----IIKRFN--SPTFCQLRWRPRPASLLSKEQVD 103 (194)
Q Consensus 70 ~~~-G~----~l~~~~--~~~~~~~~wrP~~~~Lls~~~~~ 103 (194)
++. |. +++... ...+..+.|+|+|+.|+..+.+.
T Consensus 208 ~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 248 (695)
T 2bkl_A 208 TLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG 248 (695)
T ss_dssp ETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET
T ss_pred ECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC
Confidence 984 33 555543 34688999999999998877654
No 164
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.89 E-value=5.7e-09 Score=96.78 Aligned_cols=99 Identities=8% Similarity=0.103 Sum_probs=69.7
Q ss_pred ccCCCCEEEEeecCCCC----eEEEEECCCCeEEee-eccCceEEEEECCCCCEEEEeecCccc----------ccCCeE
Q psy13461 2 KCTMGTHIVLAELRDTG----SLEFVDTGDFSVMNA-AEHHQATDVEWDPTGRYVMSGVSLWKT----------KADTGY 66 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg----~l~fwD~~~~~~i~~-~~h~~vt~v~WsPdGr~lat~ss~~~~----------~~D~~~ 66 (194)
|||||++||.+.-. +| +|.+||+.+++.+.. ..+..+..++|||||++|+.++..... .....+
T Consensus 132 ~SPDg~~la~~~~~-~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v 210 (710)
T 2xdw_A 132 FSEDGEYFAYGLSA-SGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKL 210 (710)
T ss_dssp ECTTSSEEEEEEEE-TTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEE
T ss_pred ECCCCCEEEEEEcC-CCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEE
Confidence 89999999987521 22 899999999887652 233347789999999999988752100 012238
Q ss_pred EEEeec-Cc----EEEeeC--CCCEEEEEEeeCCCceecccc
Q psy13461 67 WQWSFQ-GK----IIKRFN--SPTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 67 ~IW~~~-G~----~l~~~~--~~~~~~~~wrP~~~~Lls~~~ 101 (194)
++|++. |. +++... ...+..+.|+|+|..|+..+.
T Consensus 211 ~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 211 YYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp EEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred EEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 999984 33 444443 234789999999999987664
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.86 E-value=4.8e-09 Score=95.38 Aligned_cols=100 Identities=13% Similarity=0.110 Sum_probs=70.9
Q ss_pred ccCCCCEEEEeecCCC----------CeEEEEECCC------CeEEee--eccCceEEEEECCCCCEEEEeecCcc-cc-
Q psy13461 2 KCTMGTHIVLAELRDT----------GSLEFVDTGD------FSVMNA--AEHHQATDVEWDPTGRYVMSGVSLWK-TK- 61 (194)
Q Consensus 2 fSP~G~~la~ag~~~d----------g~l~fwD~~~------~~~i~~--~~h~~vt~v~WsPdGr~lat~ss~~~-~~- 61 (194)
|||||++||.++ .+ .+|.+||+++ ++.... .++..+..++|||||++||.++.... ..
T Consensus 137 ~spDg~~l~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~ 214 (662)
T 3azo_A 137 LLPERGEVWCMA--EEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPW 214 (662)
T ss_dssp EETTTTEEEEEE--EEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTT
T ss_pred ECCCCCEEEEEE--ecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCC
Confidence 899999999887 34 5899999987 554322 23467888999999999998874210 00
Q ss_pred cCCeEEEEeec--Cc--EEEeeC---CCCEEEEEEeeCCCceecccchh
Q psy13461 62 ADTGYWQWSFQ--GK--IIKRFN---SPTFCQLRWRPRPASLLSKEQVD 103 (194)
Q Consensus 62 ~D~~~~IW~~~--G~--~l~~~~---~~~~~~~~wrP~~~~Lls~~~~~ 103 (194)
..+.+++||+. |. .+..+. ...+.++.|+|+|..+++++.++
T Consensus 215 ~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~ 263 (662)
T 3azo_A 215 EGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTG 263 (662)
T ss_dssp TCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTS
T ss_pred CCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCC
Confidence 12479999997 41 333332 46799999999999777776654
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.82 E-value=3.8e-08 Score=83.73 Aligned_cols=96 Identities=14% Similarity=0.118 Sum_probs=68.3
Q ss_pred CccCCCCE--EEEee------cC-----CCCeEEEEECC-CCeEEeee------ccCceEEEEECCCCCEEEEeecCccc
Q psy13461 1 MKCTMGTH--IVLAE------LR-----DTGSLEFVDTG-DFSVMNAA------EHHQATDVEWDPTGRYVMSGVSLWKT 60 (194)
Q Consensus 1 ~fSP~G~~--la~ag------~~-----~dg~l~fwD~~-~~~~i~~~------~h~~vt~v~WsPdGr~lat~ss~~~~ 60 (194)
.|||+|++ +++++ .+ .+|++.+|+++ ++++.... +...+.+++|||||++|+++..
T Consensus 89 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~---- 164 (365)
T 1jof_A 89 DADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL---- 164 (365)
T ss_dssp CTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET----
T ss_pred EECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC----
Confidence 48999995 44542 10 27899999987 45543221 2356899999999999987764
Q ss_pred ccCCeEEEEeec--CcEE--EeeC----CCCEEEEEEeeCCCceecccc
Q psy13461 61 KADTGYWQWSFQ--GKII--KRFN----SPTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 61 ~~D~~~~IW~~~--G~~l--~~~~----~~~~~~~~wrP~~~~Lls~~~ 101 (194)
.++.+.+|++. |++. .... .....+++|+|+|+.|+...+
T Consensus 165 -~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~ 212 (365)
T 1jof_A 165 -TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME 212 (365)
T ss_dssp -TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET
T ss_pred -CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEEC
Confidence 36799999995 6653 2222 356899999999998877654
No 167
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.80 E-value=1.4e-08 Score=98.15 Aligned_cols=93 Identities=6% Similarity=-0.022 Sum_probs=73.5
Q ss_pred CccCCCCEEEEeecCCCCeEE-EEECCCCeEEee-eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-CcEEE
Q psy13461 1 MKCTMGTHIVLAELRDTGSLE-FVDTGDFSVMNA-AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIK 77 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~-fwD~~~~~~i~~-~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~~l~ 77 (194)
.|| +|+.|+.++ .++.|. +||+.+.+.... .+...+..++|||||++||+++. ++.+++||+. |++..
T Consensus 344 ~~s-dg~~l~~~s--~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~------~~~v~~~d~~tg~~~~ 414 (1045)
T 1k32_A 344 GGD-TKVAFIHGT--REGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVAND------RFEIMTVDLETGKPTV 414 (1045)
T ss_dssp CSS-SEEEEEEEE--TTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEET------TSEEEEEETTTCCEEE
T ss_pred eEc-CCCeEEEEE--CCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECC------CCeEEEEECCCCceEE
Confidence 378 999999988 577888 899887654332 33367999999999999999985 8899999995 55544
Q ss_pred ee--CCCCEEEEEEeeCCCceecccch
Q psy13461 78 RF--NSPTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 78 ~~--~~~~~~~~~wrP~~~~Lls~~~~ 102 (194)
.. ....+..++|+|+|+.|++++.+
T Consensus 415 ~~~~~~~~v~~~~~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 415 IERSREAMITDFTISDNSRFIAYGFPL 441 (1045)
T ss_dssp EEECSSSCCCCEEECTTSCEEEEEEEE
T ss_pred eccCCCCCccceEECCCCCeEEEEecC
Confidence 43 35668899999999999988764
No 168
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.79 E-value=1.9e-08 Score=82.28 Aligned_cols=87 Identities=16% Similarity=0.196 Sum_probs=68.6
Q ss_pred CEEEEeecCCCCeEEEEECCCCeEEeeecc-C---ceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEeeCC
Q psy13461 7 THIVLAELRDTGSLEFVDTGDFSVMNAAEH-H---QATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKRFNS 81 (194)
Q Consensus 7 ~~la~ag~~~dg~l~fwD~~~~~~i~~~~h-~---~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~~~~ 81 (194)
++|++++ .+++|.+||+.+++.+..... . .+.+++|||+|++++.++. .++.+.+||. +|+.+.....
T Consensus 2 ~~~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~-----~~~~v~~~d~~~~~~~~~~~~ 74 (337)
T 1pby_B 2 DYILAPA--RPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVN-----KSESLVKIDLVTGETLGRIDL 74 (337)
T ss_dssp EEEEEEE--TTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEET-----TTTEEEEEETTTCCEEEEEEC
T ss_pred cEEEEcC--CCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeC-----CCCeEEEEECCCCCeEeeEEc
Confidence 5788888 699999999999887765432 3 4889999999998766654 3789999998 5777766542
Q ss_pred -C------CEEEEEEeeCCCceeccc
Q psy13461 82 -P------TFCQLRWRPRPASLLSKE 100 (194)
Q Consensus 82 -~------~~~~~~wrP~~~~Lls~~ 100 (194)
. .+..++|+|++..|+.+.
T Consensus 75 ~~~~~~~~~~~~~~~s~dg~~l~~~~ 100 (337)
T 1pby_B 75 STPEERVKSLFGAALSPDGKTLAIYE 100 (337)
T ss_dssp CBTTEEEECTTCEEECTTSSEEEEEE
T ss_pred CCcccccccccceEECCCCCEEEEEe
Confidence 2 577899999999888874
No 169
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.74 E-value=7.2e-08 Score=81.15 Aligned_cols=92 Identities=7% Similarity=-0.047 Sum_probs=64.6
Q ss_pred CccCCCCEEEEeecCCCC--eEEEEECCCCeEEeeec-c-CceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-CcE
Q psy13461 1 MKCTMGTHIVLAELRDTG--SLEFVDTGDFSVMNAAE-H-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKI 75 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg--~l~fwD~~~~~~i~~~~-h-~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~~ 75 (194)
.|||||++||.++- .+| .|.+||+.+++...... + ..+..++|||||++|+.++. +..+++||+. |+.
T Consensus 42 ~~SpDg~~l~~~~~-~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~------~~~l~~~d~~~g~~ 114 (388)
T 3pe7_A 42 CFTRDGSKLLFGGA-FDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKD------GRNLMRVDLATLEE 114 (388)
T ss_dssp CBCTTSCEEEEEEC-TTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEET------TTEEEEEETTTCCE
T ss_pred cCCCCCCEEEEEEc-CCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeC------CCeEEEEECCCCcc
Confidence 48999999999883 256 58888998887655433 2 23446789999999999984 7789999996 443
Q ss_pred E--EeeCCCCEEEEE--EeeCCCceecc
Q psy13461 76 I--KRFNSPTFCQLR--WRPRPASLLSK 99 (194)
Q Consensus 76 l--~~~~~~~~~~~~--wrP~~~~Lls~ 99 (194)
. ...+...+.... ++|++..|+..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~dg~~l~~~ 142 (388)
T 3pe7_A 115 NVVYQVPAEWVGYGTWVANSDCTKLVGI 142 (388)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEE
T ss_pred eeeeechhhcccccceeECCCCCeeccc
Confidence 2 233333343344 48999888753
No 170
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.68 E-value=3e-08 Score=83.18 Aligned_cols=100 Identities=8% Similarity=0.056 Sum_probs=65.9
Q ss_pred ccCCCCEEEEeecC-CC--CeEEEEECCCCeEEeeeccCceEEEEECC-CCCEEEEeecC----------cccccCCeEE
Q psy13461 2 KCTMGTHIVLAELR-DT--GSLEFVDTGDFSVMNAAEHHQATDVEWDP-TGRYVMSGVSL----------WKTKADTGYW 67 (194)
Q Consensus 2 fSP~G~~la~ag~~-~d--g~l~fwD~~~~~~i~~~~h~~vt~v~WsP-dGr~lat~ss~----------~~~~~D~~~~ 67 (194)
|||+|++|+.++.. .. +.|.+||+.+++.........+. +.|+| ||++|+++++. +....+..+.
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~ 323 (396)
T 3c5m_A 245 WIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLY 323 (396)
T ss_dssp ECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEE-EEEECSSSSEEEEEECCC----------CCCCCCEEE
T ss_pred ECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEE
Confidence 89999988887532 12 45999999876543322222344 89999 99999886532 0011346799
Q ss_pred EEeecCcEEEeeC--CC-----------CEEEEEEeeCCCceecccch
Q psy13461 68 QWSFQGKIIKRFN--SP-----------TFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 68 IW~~~G~~l~~~~--~~-----------~~~~~~wrP~~~~Lls~~~~ 102 (194)
+||..+..+..+. .. ....+.|+|+|..|+..+..
T Consensus 324 ~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~ 371 (396)
T 3c5m_A 324 VLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDF 371 (396)
T ss_dssp EEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT
T ss_pred EEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecC
Confidence 9998654333332 22 25678999999999887753
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.67 E-value=1.9e-08 Score=91.39 Aligned_cols=99 Identities=9% Similarity=0.005 Sum_probs=67.0
Q ss_pred cCCCCE-EEEeecCCCCeEEEEECC--C-CeEEe-ee-----ccCceEEEEECCCCCEEEEeecCcc----cccCCeEEE
Q psy13461 3 CTMGTH-IVLAELRDTGSLEFVDTG--D-FSVMN-AA-----EHHQATDVEWDPTGRYVMSGVSLWK----TKADTGYWQ 68 (194)
Q Consensus 3 SP~G~~-la~ag~~~dg~l~fwD~~--~-~~~i~-~~-----~h~~vt~v~WsPdGr~lat~ss~~~----~~~D~~~~I 68 (194)
||||++ ||.++. .++.|.++|++ + +.... +. +...+.+++|||||++||+++.... ....+.+++
T Consensus 87 SPDg~~~la~~~~-~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~ 165 (662)
T 3azo_A 87 RPAGGPLLVFTHF-GDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAA 165 (662)
T ss_dssp CSSSSCEEEEEBT-TTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEE
T ss_pred ecCCCeEEEEEEC-CCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEE
Confidence 599999 887763 25678788876 2 33222 22 2346889999999999998885200 001157889
Q ss_pred EeecC------cEEEeeC---CCCEEEEEEeeCCCceecccch
Q psy13461 69 WSFQG------KIIKRFN---SPTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 69 W~~~G------~~l~~~~---~~~~~~~~wrP~~~~Lls~~~~ 102 (194)
||+.| ..+..+. ...+..++|+|+|+.|+..+.+
T Consensus 166 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~ 208 (662)
T 3azo_A 166 VPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWD 208 (662)
T ss_dssp EETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEEC
T ss_pred EECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECC
Confidence 99976 4444333 3457789999999999877644
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.63 E-value=1.6e-07 Score=76.29 Aligned_cols=94 Identities=6% Similarity=0.129 Sum_probs=71.4
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--c--cCceEEEEECCCCCEEEEeecCcccccCC-eEEEEeecCcEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--E--HHQATDVEWDPTGRYVMSGVSLWKTKADT-GYWQWSFQGKII 76 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~--h~~vt~v~WsPdGr~lat~ss~~~~~~D~-~~~IW~~~G~~l 76 (194)
++|+|+++|+.+ .++.|.+||.+. ..+... + ...+..|++||+|+++++... ++ .+.+|+.+|+.+
T Consensus 171 ~~~~g~l~v~~~--~~~~i~~~~~~g-~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~------~~~~i~~~~~~g~~~ 241 (286)
T 1q7f_A 171 VNDKQEIFISDN--RAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEILIADNH------NNFNLTIFTQDGQLI 241 (286)
T ss_dssp ECSSSEEEEEEG--GGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEEEEECS------SSCEEEEECTTSCEE
T ss_pred ECCCCCEEEEEC--CCCEEEEEcCCC-CEEEEEccCCccCCCcEEEECCCCCEEEEeCC------CCEEEEEECCCCCEE
Confidence 689999887766 578999999864 333332 1 246899999999998888774 65 999999999988
Q ss_pred EeeC----CCCEEEEEEeeCCCceecccchhHH
Q psy13461 77 KRFN----SPTFCQLRWRPRPASLLSKEQVDKI 105 (194)
Q Consensus 77 ~~~~----~~~~~~~~wrP~~~~Lls~~~~~~I 105 (194)
.... ......+++.|+|..+++. .+..|
T Consensus 242 ~~~~~~~~~~~~~~i~~~~~g~l~vs~-~~~~v 273 (286)
T 1q7f_A 242 SALESKVKHAQCFDVALMDDGSVVLAS-KDYRL 273 (286)
T ss_dssp EEEEESSCCSCEEEEEEETTTEEEEEE-TTTEE
T ss_pred EEEcccCCCCcceeEEECCCCcEEEEC-CCCeE
Confidence 7664 2347899999999988774 45444
No 173
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.63 E-value=2.5e-07 Score=79.42 Aligned_cols=86 Identities=9% Similarity=0.095 Sum_probs=67.0
Q ss_pred ccCCCCEEEEeec-C--------CCCeEEEEECCCCeEEeeec-cCceEEEEECCCCCEEEEeecCcccccCCeEEEEee
Q psy13461 2 KCTMGTHIVLAEL-R--------DTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF 71 (194)
Q Consensus 2 fSP~G~~la~ag~-~--------~dg~l~fwD~~~~~~i~~~~-h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~ 71 (194)
|||+|+++.++.- . ..++|.+||+.+++.+.+.. +. +..|+|||||++|++++ ++.+.+||.
T Consensus 261 ~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n-------~~~v~v~D~ 332 (361)
T 2oiz_A 261 LHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLD-------GGNVNVYDI 332 (361)
T ss_dssp EETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEEC-------SSCEEEEEC
T ss_pred EecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeC-------CCeEEEEEC
Confidence 6899887766531 0 13489999999999887653 34 99999999999999776 389999998
Q ss_pred -cC--cEEEee-C-CCCEEEEEEeeCCCc
Q psy13461 72 -QG--KIIKRF-N-SPTFCQLRWRPRPAS 95 (194)
Q Consensus 72 -~G--~~l~~~-~-~~~~~~~~wrP~~~~ 95 (194)
+| +++... . ...-..|+++|+|.+
T Consensus 333 ~t~~l~~~~~i~~~G~~P~~~~~~p~G~~ 361 (361)
T 2oiz_A 333 SQPEPKLLRTIEGAAEASLQVQFHPVGGT 361 (361)
T ss_dssp SSSSCEEEEEETTSCSSEEEEEECCCSCC
T ss_pred CCCcceeeEEeccCCCCcEEEEecCCCCC
Confidence 58 888875 3 456688999999864
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.60 E-value=1.7e-07 Score=78.84 Aligned_cols=100 Identities=15% Similarity=0.094 Sum_probs=69.6
Q ss_pred ccCCCCEEEEee--------------------cCCCCeEEEEECCCCeEEeee-ccCceEEEEECC-CCCEEEEeecCcc
Q psy13461 2 KCTMGTHIVLAE--------------------LRDTGSLEFVDTGDFSVMNAA-EHHQATDVEWDP-TGRYVMSGVSLWK 59 (194)
Q Consensus 2 fSP~G~~la~ag--------------------~~~dg~l~fwD~~~~~~i~~~-~h~~vt~v~WsP-dGr~lat~ss~~~ 59 (194)
+||+|++++... .+.++.|.+||+.+++..... +...+.+++||| ||++||.++....
T Consensus 132 ~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~ 211 (388)
T 3pe7_A 132 ANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPH 211 (388)
T ss_dssp ECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCT
T ss_pred ECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCC
Confidence 489999987421 003478999999887654332 335689999999 9999998875321
Q ss_pred cccCCeEEEEeecCcEEEeeC--C--CCEEEEEEeeCCCceecccc
Q psy13461 60 TKADTGYWQWSFQGKIIKRFN--S--PTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 60 ~~~D~~~~IW~~~G~~l~~~~--~--~~~~~~~wrP~~~~Lls~~~ 101 (194)
......+++++..|..+..+. . ..+..+.|+|+|..|+..+.
T Consensus 212 ~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~ 257 (388)
T 3pe7_A 212 DLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSY 257 (388)
T ss_dssp TTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEE
T ss_pred CCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEec
Confidence 122446788888777665553 2 24778999999998876554
No 175
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.55 E-value=3e-07 Score=77.07 Aligned_cols=90 Identities=6% Similarity=-0.000 Sum_probs=59.8
Q ss_pred CccCCCCEEEEeecC-CCCeEEEEECCCCeEEeeec-cCce-EEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEE
Q psy13461 1 MKCTMGTHIVLAELR-DTGSLEFVDTGDFSVMNAAE-HHQA-TDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 77 (194)
Q Consensus 1 ~fSP~G~~la~ag~~-~dg~l~fwD~~~~~~i~~~~-h~~v-t~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~ 77 (194)
.|||||++||.++-. .+..|.+||+.+++...... +..+ ..+.|||||++||.++. ++.+++|++.+....
T Consensus 42 ~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~------~~~l~~~d~~~~~~~ 115 (396)
T 3c5m_A 42 CFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKN------ELNLMKVDLETLEEQ 115 (396)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEET------TTEEEEEETTTCCEE
T ss_pred cCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEc------CCcEEEEECCCCCcE
Confidence 489999998887521 23478889998877544332 2233 33789999999999885 668999999654333
Q ss_pred ee-C-CCCEEEEEEeeCCCceecccc
Q psy13461 78 RF-N-SPTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 78 ~~-~-~~~~~~~~wrP~~~~Lls~~~ 101 (194)
.. . ... |+|++..|+..+.
T Consensus 116 ~~~~~~~~-----~~~~g~~l~~~~~ 136 (396)
T 3c5m_A 116 VIYTVDEE-----WKGYGTWVANSDC 136 (396)
T ss_dssp EEEECCTT-----EEEEEEEEECTTS
T ss_pred EEEecccc-----cCCCCCEEEeccC
Confidence 22 2 122 6777666665543
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.51 E-value=2.7e-07 Score=76.63 Aligned_cols=93 Identities=13% Similarity=0.112 Sum_probs=63.4
Q ss_pred CCCEEEEeecC-------CCCeEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEE
Q psy13461 5 MGTHIVLAELR-------DTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 77 (194)
Q Consensus 5 ~G~~la~ag~~-------~dg~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~ 77 (194)
||++||..... .++.|.+||+++++.... ..+..++|||||++||.++.... .....+++|++.|....
T Consensus 23 dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l---~~~~~~~~SpDg~~la~~~~~~~-~~~~~l~~~~~~~g~~~ 98 (347)
T 2gop_A 23 KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI---ENATMPRISPDGKKIAFMRANEE-KKVSEIWVADLETLSSK 98 (347)
T ss_dssp ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE---ESCEEEEECTTSSEEEEEEEETT-TTEEEEEEEETTTTEEE
T ss_pred CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc---ccCCCeEECCCCCEEEEEEeccC-CCcceEEEEECCCCceE
Confidence 78888764210 256899999987654332 46888999999999998874100 00123777787654443
Q ss_pred ee-C-CCCEEEEEEeeCCCceecccch
Q psy13461 78 RF-N-SPTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 78 ~~-~-~~~~~~~~wrP~~~~Lls~~~~ 102 (194)
.+ . .. +..+.|+|+|..|+..+..
T Consensus 99 ~l~~~~~-~~~~~wspdg~~l~~~~~~ 124 (347)
T 2gop_A 99 KILEAKN-IRSLEWNEDSRKLLIVGFK 124 (347)
T ss_dssp EEEEESE-EEEEEECTTSSEEEEEEEC
T ss_pred EEEcCCC-ccceeECCCCCEEEEEEcc
Confidence 33 2 33 9999999999999988753
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.51 E-value=8.7e-07 Score=73.36 Aligned_cols=95 Identities=8% Similarity=0.129 Sum_probs=70.0
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEee--eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEe-
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNA--AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKR- 78 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~--~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~- 78 (194)
|+|+|+++++++ .++.|.+||.++++.... .....+.+++|+|+|+++++..... ...+++.+||..|..+..
T Consensus 52 ~~~~g~l~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~--~~~~~i~~~d~~~~~~~~~ 127 (333)
T 2dg1_A 52 FDRQGQLFLLDV--FEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDF--KSTGGIFAATENGDNLQDI 127 (333)
T ss_dssp ECTTSCEEEEET--TTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTS--SSCCEEEEECTTSCSCEEE
T ss_pred ECCCCCEEEEEC--CCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCC--CCCceEEEEeCCCCEEEEE
Confidence 789999888776 578999999987665432 2346799999999999888776310 011689999997654432
Q ss_pred e----CCCCEEEEEEeeCCCceeccc
Q psy13461 79 F----NSPTFCQLRWRPRPASLLSKE 100 (194)
Q Consensus 79 ~----~~~~~~~~~wrP~~~~Lls~~ 100 (194)
. ....++.+++.|++..+++..
T Consensus 128 ~~~~~~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 128 IEDLSTAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp ECSSSSCCCEEEEEECTTSCEEEEEC
T ss_pred EccCccCCcccceEECCCCCEEEEec
Confidence 1 235689999999999888765
No 178
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.49 E-value=2.1e-07 Score=79.93 Aligned_cols=88 Identities=9% Similarity=0.081 Sum_probs=61.5
Q ss_pred CccCCCCEEEEeec-------C-CCCeEEEEECCCCeEEeeec--------cCceEEEEECCCCCEEEEeecCcccccCC
Q psy13461 1 MKCTMGTHIVLAEL-------R-DTGSLEFVDTGDFSVMNAAE--------HHQATDVEWDPTGRYVMSGVSLWKTKADT 64 (194)
Q Consensus 1 ~fSP~G~~la~ag~-------~-~dg~l~fwD~~~~~~i~~~~--------h~~vt~v~WsPdGr~lat~ss~~~~~~D~ 64 (194)
.|||+|++|.+++. | .+++|.+||+.+++.+.+.. ......+++||||++|.+++.. .++
T Consensus 56 ~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~----~~~ 131 (361)
T 2oiz_A 56 QVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS----PAT 131 (361)
T ss_dssp EECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES----SSE
T ss_pred EECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC----CCC
Confidence 48999999988852 1 25679999999887765532 1346789999999999988731 267
Q ss_pred eEEEEee-cCcEEEe-eCCCCEEEEEEeeC
Q psy13461 65 GYWQWSF-QGKIIKR-FNSPTFCQLRWRPR 92 (194)
Q Consensus 65 ~~~IW~~-~G~~l~~-~~~~~~~~~~wrP~ 92 (194)
.+.+||. +++.+.. ........+...|.
T Consensus 132 ~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~ 161 (361)
T 2oiz_A 132 SIGIVDVAKGDYVEDVTAAAGCWSVIPQPN 161 (361)
T ss_dssp EEEEEETTTTEEEEEEGGGTTEEEEEECTT
T ss_pred eEEEEECCCCcEEEEEecCCCcceeEEcCC
Confidence 8999999 4777776 54433333333443
No 179
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.48 E-value=8.5e-07 Score=71.99 Aligned_cols=95 Identities=9% Similarity=0.115 Sum_probs=73.6
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee----ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA----EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 77 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~----~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~ 77 (194)
++|+|+++|+.+ .++.|.+||.+. +.+... +...+..|+++|+|+++++.+. ++.+.+|+..|+.+.
T Consensus 128 ~~~~g~l~v~~~--~~~~i~~~~~~g-~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~~ 198 (286)
T 1q7f_A 128 VDNKGRIIVVEC--KVMRVIIFDQNG-NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR------AHCVKVFNYEGQYLR 198 (286)
T ss_dssp ECTTSCEEEEET--TTTEEEEECTTS-CEEEEEECTTTCSSEEEEEECSSSEEEEEEGG------GTEEEEEETTCCEEE
T ss_pred EeCCCCEEEEEC--CCCEEEEEcCCC-CEEEEeCCCCccCCcEEEEECCCCCEEEEECC------CCEEEEEcCCCCEEE
Confidence 689999887766 578999999764 333322 2246899999999998887763 889999999999887
Q ss_pred eeCC----CCEEEEEEeeCCCceecccchh-HH
Q psy13461 78 RFNS----PTFCQLRWRPRPASLLSKEQVD-KI 105 (194)
Q Consensus 78 ~~~~----~~~~~~~wrP~~~~Lls~~~~~-~I 105 (194)
.... .....+++.|+|..+++..... .|
T Consensus 199 ~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i 231 (286)
T 1q7f_A 199 QIGGEGITNYPIGVGINSNGEILIADNHNNFNL 231 (286)
T ss_dssp EESCTTTSCSEEEEEECTTCCEEEEECSSSCEE
T ss_pred EEccCCccCCCcEEEECCCCCEEEEeCCCCEEE
Confidence 7642 5688999999999888876553 44
No 180
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.46 E-value=4e-07 Score=84.97 Aligned_cols=100 Identities=6% Similarity=0.018 Sum_probs=67.7
Q ss_pred ccCCCCEEEEeecC-CC--CeEEEEECCCCeEEeee-ccCceEEEEECCCCCEEEEeecCccc--------ccCCeEEEE
Q psy13461 2 KCTMGTHIVLAELR-DT--GSLEFVDTGDFSVMNAA-EHHQATDVEWDPTGRYVMSGVSLWKT--------KADTGYWQW 69 (194)
Q Consensus 2 fSP~G~~la~ag~~-~d--g~l~fwD~~~~~~i~~~-~h~~vt~v~WsPdGr~lat~ss~~~~--------~~D~~~~IW 69 (194)
|||||++||.+.-. .+ .+|.+||+.+++.+... +...+..++|||| +.|+.++..... .....+++|
T Consensus 170 ~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~ 248 (741)
T 1yr2_A 170 ASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLH 248 (741)
T ss_dssp ECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEE
T ss_pred ECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEE
Confidence 89999999987521 11 46999999998775432 2222368899999 999988742110 012348888
Q ss_pred eec-Cc----EEEeeCC--CCEEEEEEeeCCCceecccch
Q psy13461 70 SFQ-GK----IIKRFNS--PTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 70 ~~~-G~----~l~~~~~--~~~~~~~wrP~~~~Lls~~~~ 102 (194)
++. |. +++.... ..+..+.|+|+|+.|+..+..
T Consensus 249 ~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 288 (741)
T 1yr2_A 249 RLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSE 288 (741)
T ss_dssp ETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEEC
T ss_pred ECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEc
Confidence 873 32 4554432 258899999999988877654
No 181
>3zwl_E Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.43 E-value=9e-08 Score=60.94 Aligned_cols=40 Identities=30% Similarity=0.466 Sum_probs=28.9
Q ss_pred HHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13461 121 RQRMNKASKELIEKRRKLFKQFEELREKLRETWEAEKEER 160 (194)
Q Consensus 121 ~~~~~~~~~e~~~~r~~~~~e~~~~~~~~~~~~~~~~~~~ 160 (194)
+|+.+.+++++|++||+|+++|++||++..+++.++++.+
T Consensus 3 ame~dsA~~evIe~RRrlLeEW~awRa~~~~~L~eer~~~ 42 (50)
T 3zwl_E 3 HMEADTAMRDLILHQRELLKQWTEYREKIGQEMEKSMNFK 42 (50)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5778899999999999999999999999999998876443
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.42 E-value=1.1e-06 Score=72.01 Aligned_cols=92 Identities=7% Similarity=-0.087 Sum_probs=68.6
Q ss_pred CccCCCC-EEEEeecCCCCeEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEe
Q psy13461 1 MKCTMGT-HIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKR 78 (194)
Q Consensus 1 ~fSP~G~-~la~ag~~~dg~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~ 78 (194)
.|+|+|+ +++++. .++.|..||.++.......+...+..++++|+|+++++... ++++.+||. +|+...-
T Consensus 34 ~~d~~g~~l~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~~------~~~i~~~d~~~g~~~~~ 105 (296)
T 3e5z_A 34 VYVPARSAVIFSDV--RQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHG------LRRLERQREPGGEWESI 105 (296)
T ss_dssp EEEGGGTEEEEEEG--GGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEETT------TTEEEEECSTTCCEEEE
T ss_pred eEeCCCCEEEEEeC--CCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEecC------CCeEEEEcCCCCcEEEE
Confidence 3799999 666665 57999999998762222233456899999999998887763 689999999 6775432
Q ss_pred eC------CCCEEEEEEeeCCCceeccc
Q psy13461 79 FN------SPTFCQLRWRPRPASLLSKE 100 (194)
Q Consensus 79 ~~------~~~~~~~~wrP~~~~Lls~~ 100 (194)
.. ...++.+++.|+|..++|.+
T Consensus 106 ~~~~~~~~~~~~~~i~~d~~G~l~vtd~ 133 (296)
T 3e5z_A 106 ADSFEGKKLNSPNDVCLAPDGSLWFSDP 133 (296)
T ss_dssp ECEETTEECCCCCCEEECTTSCEEEEEC
T ss_pred eeccCCCCCCCCCCEEECCCCCEEEECC
Confidence 21 34567899999999999754
No 183
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.41 E-value=9.4e-07 Score=74.23 Aligned_cols=98 Identities=10% Similarity=0.142 Sum_probs=75.3
Q ss_pred CccCCCCEEEEeecCCC------------------------CeEEEEECCCCeEEeeec---cCceEEEEECCCCCEEEE
Q psy13461 1 MKCTMGTHIVLAELRDT------------------------GSLEFVDTGDFSVMNAAE---HHQATDVEWDPTGRYVMS 53 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~d------------------------g~l~fwD~~~~~~i~~~~---h~~vt~v~WsPdGr~lat 53 (194)
.++|+|+++|+.. .+ ++|.+||.++++++.... ......|+++|+|+++++
T Consensus 30 a~d~~G~l~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~ 107 (329)
T 3fvz_A 30 ALDSKNNLVIFHR--GDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVT 107 (329)
T ss_dssp EECTTCCEEEEEC--TTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEE
T ss_pred EECCCCCEEEEeC--CCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEE
Confidence 3799999998876 34 479999998877765432 247899999999998887
Q ss_pred eecCcccccCCeEEEEeecCc--EEEeeC-----------CCCEEEEEEee-CCCceeccc-chhHHH
Q psy13461 54 GVSLWKTKADTGYWQWSFQGK--IIKRFN-----------SPTFCQLRWRP-RPASLLSKE-QVDKIK 106 (194)
Q Consensus 54 ~ss~~~~~~D~~~~IW~~~G~--~l~~~~-----------~~~~~~~~wrP-~~~~Lls~~-~~~~Ik 106 (194)
.+. ++.+.+|+.+|. .+..+. ......+++.| ++..+++.+ ....|+
T Consensus 108 d~~------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~ 169 (329)
T 3fvz_A 108 DVA------LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIV 169 (329)
T ss_dssp ETT------TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEE
T ss_pred ECC------CCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEE
Confidence 764 789999999987 555442 33688999999 889888886 455553
No 184
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.39 E-value=1.8e-06 Score=71.77 Aligned_cols=87 Identities=10% Similarity=0.056 Sum_probs=72.1
Q ss_pred CCCEEEEeecCCCCeEEEEECCCCeEEeeecc---CceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEeeCC
Q psy13461 5 MGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH---HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRFNS 81 (194)
Q Consensus 5 ~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h---~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~~~ 81 (194)
.|++|++++ .++.|.+||..+++.+-+... ..+.++.++|+|++|+++ ++++..||.+|+++.+...
T Consensus 4 ~~~~lv~~~--~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~--------~~~V~~~d~~G~~~W~~~~ 73 (276)
T 3no2_A 4 PQHLLVGGS--GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY--------SKGAKMITRDGRELWNIAA 73 (276)
T ss_dssp CCEEEEECT--TCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEEC--------BSEEEEECTTSCEEEEEEC
T ss_pred CCcEEEeeC--CCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeC--------CCCEEEECCCCCEEEEEcC
Confidence 468888888 699999999988888766432 368999999999999932 6789999999999988763
Q ss_pred ---CCEEEEEEeeCCCceecccc
Q psy13461 82 ---PTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 82 ---~~~~~~~wrP~~~~Lls~~~ 101 (194)
..+..+.+.|+|..|++.+.
T Consensus 74 ~~~~~~~~~~~~~dG~~lv~~~~ 96 (276)
T 3no2_A 74 PAGCEMQTARILPDGNALVAWCG 96 (276)
T ss_dssp CTTCEEEEEEECTTSCEEEEEES
T ss_pred CCCccccccEECCCCCEEEEecC
Confidence 46888999999999998765
No 185
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.38 E-value=6.2e-07 Score=73.45 Aligned_cols=96 Identities=14% Similarity=0.058 Sum_probs=70.5
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECC-CCeE-----EeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCc
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTG-DFSV-----MNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGK 74 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~-~~~~-----i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~ 74 (194)
.|||+|++|++.+ .++.|..||++ ++.+ +.......+..++++|+|+++++. ++++.+|+.+|+
T Consensus 178 ~~s~dg~~lv~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--------~~~v~~~~~~g~ 247 (296)
T 3e5z_A 178 AFLPSGNLLVSDT--GDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--------GDGVHVLTPDGD 247 (296)
T ss_dssp EECTTSCEEEEET--TTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--------TTEEEEECTTSC
T ss_pred EECCCCCEEEEeC--CCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--------CCeEEEECCCCC
Confidence 3799999996655 57899999986 4443 112223456789999999977655 468999999999
Q ss_pred EEEeeC-CCCEEEEEE-eeCCCceecccchhHHH
Q psy13461 75 IIKRFN-SPTFCQLRW-RPRPASLLSKEQVDKIK 106 (194)
Q Consensus 75 ~l~~~~-~~~~~~~~w-rP~~~~Lls~~~~~~Ik 106 (194)
++.... ...+..++| .|++..|..++..+..+
T Consensus 248 ~~~~~~~~~~~~~~~f~~~d~~~L~v~t~~~l~~ 281 (296)
T 3e5z_A 248 ELGRVLTPQTTSNLCFGGPEGRTLYMTVSTEFWS 281 (296)
T ss_dssp EEEEEECSSCCCEEEEESTTSCEEEEEETTEEEE
T ss_pred EEEEEECCCCceeEEEECCCCCEEEEEcCCeEEE
Confidence 887764 223888999 58998888877665444
No 186
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.32 E-value=3.2e-06 Score=77.84 Aligned_cols=91 Identities=9% Similarity=0.085 Sum_probs=71.4
Q ss_pred CCCCEEEEeecCCCCeEEEEECCCCeEEeeec-cCceEEEEECCCCCEEEEeecCcccccCCeEEEEee---cCcEEEee
Q psy13461 4 TMGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF---QGKIIKRF 79 (194)
Q Consensus 4 P~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~-h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~---~G~~l~~~ 79 (194)
|.+.++|+.. .+++|.++|..+++++.+.. ...+..+.+||||+|+.+++. |+.+.+||+ +++.+.+.
T Consensus 165 ~~~~~~V~~~--~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~------dg~V~viD~~~~t~~~v~~i 236 (567)
T 1qks_A 165 LENLFSVTLR--DAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGR------DGKVNMIDLWMKEPTTVAEI 236 (567)
T ss_dssp GGGEEEEEET--TTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEET------TSEEEEEETTSSSCCEEEEE
T ss_pred CCceEEEEeC--CCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcC------CCeEEEEECCCCCCcEeEEE
Confidence 3344555554 68999999999988877653 346778999999999998874 889999999 67788777
Q ss_pred C-CCCEEEEEEe----eCCCceecccch
Q psy13461 80 N-SPTFCQLRWR----PRPASLLSKEQV 102 (194)
Q Consensus 80 ~-~~~~~~~~wr----P~~~~Lls~~~~ 102 (194)
. ...-..++++ |+|+.|+.+.+.
T Consensus 237 ~~G~~P~~ia~s~~~~pDGk~l~v~n~~ 264 (567)
T 1qks_A 237 KIGSEARSIETSKMEGWEDKYAIAGAYW 264 (567)
T ss_dssp ECCSEEEEEEECCSTTCTTTEEEEEEEE
T ss_pred ecCCCCceeEEccccCCCCCEEEEEEcc
Confidence 5 3456799999 799988877654
No 187
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.30 E-value=3.7e-06 Score=77.80 Aligned_cols=97 Identities=12% Similarity=0.061 Sum_probs=66.3
Q ss_pred ccCCCCEEEEeecCCCCe----------------EEEEECCCCe----EEeeec-c-CceEEEEECCCCCEEEEeecCcc
Q psy13461 2 KCTMGTHIVLAELRDTGS----------------LEFVDTGDFS----VMNAAE-H-HQATDVEWDPTGRYVMSGVSLWK 59 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~----------------l~fwD~~~~~----~i~~~~-h-~~vt~v~WsPdGr~lat~ss~~~ 59 (194)
|||||+.|+.++. ++. |.+|++.+.+ ++.... + ..+..++|||||++|+.++..-
T Consensus 178 wspDg~~l~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~- 254 (710)
T 2xdw_A 178 WTHDGKGMFYNAY--PQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREG- 254 (710)
T ss_dssp ECTTSSEEEEEEC--CCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECS-
T ss_pred EEeCCCEEEEEEE--CCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEcc-
Confidence 8999999998873 443 9999998754 444432 2 3478999999999999887420
Q ss_pred cccCCeEEEEeecC-------c-EEEee--CCCCEEEEEEeeCCCceecccch
Q psy13461 60 TKADTGYWQWSFQG-------K-IIKRF--NSPTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 60 ~~~D~~~~IW~~~G-------~-~l~~~--~~~~~~~~~wrP~~~~Lls~~~~ 102 (194)
...++.+++||+.+ . .+..+ ....+.. .|+|+|..|+..+..
T Consensus 255 ~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~ 306 (710)
T 2xdw_A 255 CDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNR 306 (710)
T ss_dssp SSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECT
T ss_pred CCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECC
Confidence 11167899999964 2 23333 2334444 599999988766543
No 188
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.23 E-value=5.2e-06 Score=73.36 Aligned_cols=79 Identities=10% Similarity=0.088 Sum_probs=61.6
Q ss_pred EEEeecCCCCeEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEE---Eee------
Q psy13461 9 IVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKII---KRF------ 79 (194)
Q Consensus 9 la~ag~~~dg~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l---~~~------ 79 (194)
+|+++ .||+|.+||+.++.... ....|++++|||+| ++.|.. |+.+++|+..|..+ ...
T Consensus 139 ~av~~--~dG~L~v~dl~~~~~~~--~~~~Vs~v~WSpkG--~~vg~~------dg~i~~~~~~~~~~~~k~~I~~Pp~~ 206 (388)
T 1xip_A 139 LVILN--SVNDLSALDLRTKSTKQ--LAQNVTSFDVTNSQ--LAVLLK------DRSFQSFAWRNGEMEKQFEFSLPSEL 206 (388)
T ss_dssp EEEEE--TTSEEEEEETTTCCEEE--EEESEEEEEECSSE--EEEEET------TSCEEEEEEETTEEEEEEEECCCHHH
T ss_pred EEEEE--CCCCEEEEEccCCcccc--ccCCceEEEEcCCc--eEEEEc------CCcEEEEcCCCccccccceecCCccc
Confidence 66676 69999999998776654 23589999999999 455553 99999999988775 233
Q ss_pred -----CCCCEEEEEEeeCCCceecc
Q psy13461 80 -----NSPTFCQLRWRPRPASLLSK 99 (194)
Q Consensus 80 -----~~~~~~~~~wrP~~~~Lls~ 99 (194)
....|.++.|.|++..|++-
T Consensus 207 ~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 207 EELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp HTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred ccccCCCeeEEEEEEecCCeEEEEE
Confidence 13459999999999888874
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.21 E-value=5e-06 Score=76.84 Aligned_cols=94 Identities=5% Similarity=-0.028 Sum_probs=61.2
Q ss_pred ccCCCCEEEEeecCCCCe-------------EEEEECCCCe----EEeeec-c-CceEEEEECCCCCEEEEeecCccccc
Q psy13461 2 KCTMGTHIVLAELRDTGS-------------LEFVDTGDFS----VMNAAE-H-HQATDVEWDPTGRYVMSGVSLWKTKA 62 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~-------------l~fwD~~~~~----~i~~~~-h-~~vt~v~WsPdGr~lat~ss~~~~~~ 62 (194)
|||||+.|+.++ .++. |.+|++.+.. ++.... + ..+..++|||||++|+.++..- ..
T Consensus 175 wspDg~~l~~~~--~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~--~~ 250 (695)
T 2bkl_A 175 WTPDSKGFYYEW--LPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG--WS 250 (695)
T ss_dssp ECTTSSEEEEEE--CCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET--TT
T ss_pred EecCCCEEEEEE--ecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC--CC
Confidence 899999999988 3444 9999998654 555432 3 4688999999999999887520 01
Q ss_pred CCeEEEEeecCcEEEee--CCCCEEEEEEeeCCCceecccc
Q psy13461 63 DTGYWQWSFQGKIIKRF--NSPTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 63 D~~~~IW~~~G~~l~~~--~~~~~~~~~wrP~~~~Lls~~~ 101 (194)
.+.+++|+..+..+..+ .........| |++. |+..+.
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~ 289 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTD 289 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEEC
T ss_pred ceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEEC
Confidence 12566666643223332 2445666667 7777 554443
No 190
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.19 E-value=9e-06 Score=67.14 Aligned_cols=93 Identities=12% Similarity=0.064 Sum_probs=66.6
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCC-CeEE--------eee-ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGD-FSVM--------NAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF 71 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~-~~~i--------~~~-~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~ 71 (194)
|||+|++|.++.. .++.|..||+++ +..+ ... .+..+..++++|+|+++++... ++++.+||.
T Consensus 189 ~~~dg~~l~v~~~-~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~------~~~v~~~d~ 261 (333)
T 2dg1_A 189 LSTDEKVLWVTET-TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG------QGRVLVFNK 261 (333)
T ss_dssp ECTTSSEEEEEEG-GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET------TTEEEEECT
T ss_pred ECCCCCEEEEEeC-CCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcC------CCEEEEECC
Confidence 7999997655542 478999999853 2211 111 1246788999999998887763 789999999
Q ss_pred cCcEEEeeCCC--------CEEEEEEeeCCCceecccc
Q psy13461 72 QGKIIKRFNSP--------TFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 72 ~G~~l~~~~~~--------~~~~~~wrP~~~~Lls~~~ 101 (194)
+|+.+...... .+..++|+|++..|..++.
T Consensus 262 ~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 262 RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeC
Confidence 99887776422 5789999999877754433
No 191
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.18 E-value=8.3e-06 Score=65.08 Aligned_cols=97 Identities=7% Similarity=-0.021 Sum_probs=73.6
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEee-ec-cCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEee
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNA-AE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRF 79 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~-~~-h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~ 79 (194)
++|+|+++++.. .++.|..||.++...... .. ...+..|+++|+|+.+++... ++.+.+|+..|......
T Consensus 157 ~~~~g~l~v~~~--~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~------~~~v~~~~~~~~~~~~~ 228 (270)
T 1rwi_B 157 VDNSGNVYVTDT--DNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHN------TNQVVKLLAGSTTSTVL 228 (270)
T ss_dssp ECTTCCEEEEEG--GGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETT------TSCEEEECTTCSCCEEC
T ss_pred EeCCCCEEEEEC--CCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECC------CCcEEEEcCCCCcceee
Confidence 689999777765 478999999887554332 12 256899999999987776653 78899999988765443
Q ss_pred C---CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 80 N---SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 80 ~---~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
. ......+++.|+|..+++......|+
T Consensus 229 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~ 258 (270)
T 1rwi_B 229 PFTGLNTPLAVAVDSDRTVYVADRGNDRVV 258 (270)
T ss_dssp CCCSCSCEEEEEECTTCCEEEEEGGGTEEE
T ss_pred ccCCCCCceeEEECCCCCEEEEECCCCEEE
Confidence 3 35689999999999888888777664
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.17 E-value=1.9e-05 Score=72.64 Aligned_cols=90 Identities=11% Similarity=0.113 Sum_probs=69.6
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECC--CCeEEeeec-cCceEEEEEC----CCCCEEEEeecCcccccCCeEEEEee-c
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTG--DFSVMNAAE-HHQATDVEWD----PTGRYVMSGVSLWKTKADTGYWQWSF-Q 72 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~--~~~~i~~~~-h~~vt~v~Ws----PdGr~lat~ss~~~~~~D~~~~IW~~-~ 72 (194)
.|||||+++.+++ .+|.|.+||+. +++.+.+.. ......++|| |||+++++++. .++++.|+|. +
T Consensus 203 ~~SpDGr~lyv~~--~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~-----~~~~v~ViD~~t 275 (567)
T 1qks_A 203 RLSASGRYLFVIG--RDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAY-----WPPQYVIMDGET 275 (567)
T ss_dssp EECTTSCEEEEEE--TTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEE-----ETTEEEEEETTT
T ss_pred EECCCCCEEEEEc--CCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEc-----cCCeEEEEECCC
Confidence 3899999999998 68999999995 777766543 3456899999 79999998885 4899999997 4
Q ss_pred CcEEEeeCC-------------CCEEEEEEeeCCCcee
Q psy13461 73 GKIIKRFNS-------------PTFCQLRWRPRPASLL 97 (194)
Q Consensus 73 G~~l~~~~~-------------~~~~~~~wrP~~~~Ll 97 (194)
++.+..... .++..+..+|+++.++
T Consensus 276 ~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~v 313 (567)
T 1qks_A 276 LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFI 313 (567)
T ss_dssp CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEE
T ss_pred CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEE
Confidence 677665431 2677888888765433
No 193
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.16 E-value=2.9e-06 Score=78.80 Aligned_cols=96 Identities=6% Similarity=0.002 Sum_probs=63.9
Q ss_pred ccCCCCEEEEeecC---CCCeEEEEECCCCeEEeeeccCc-eEEEEECCCCCEEEEeecCcc-------cccCCeEEEEe
Q psy13461 2 KCTMGTHIVLAELR---DTGSLEFVDTGDFSVMNAAEHHQ-ATDVEWDPTGRYVMSGVSLWK-------TKADTGYWQWS 70 (194)
Q Consensus 2 fSP~G~~la~ag~~---~dg~l~fwD~~~~~~i~~~~h~~-vt~v~WsPdGr~lat~ss~~~-------~~~D~~~~IW~ 70 (194)
|||||++||-+.-. ...+|.+||+.+++.+...-+.. ...++|+ ||+.|+.++..-. ......+++|+
T Consensus 136 ~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~ 214 (693)
T 3iuj_A 136 FSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHR 214 (693)
T ss_dssp ECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEE
T ss_pred ECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEE
Confidence 89999999864321 23689999999988654321111 3678999 9999998875200 01123488888
Q ss_pred ec-C----cEEEeeCC---CCEEEEEEeeCCCceec
Q psy13461 71 FQ-G----KIIKRFNS---PTFCQLRWRPRPASLLS 98 (194)
Q Consensus 71 ~~-G----~~l~~~~~---~~~~~~~wrP~~~~Lls 98 (194)
+. + .+++.... ..+..+.|+|+|+.|+-
T Consensus 215 lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~ 250 (693)
T 3iuj_A 215 LGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLI 250 (693)
T ss_dssp TTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEE
T ss_pred CCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEE
Confidence 73 2 25555433 34789999999998853
No 194
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.11 E-value=1.5e-05 Score=66.79 Aligned_cols=98 Identities=19% Similarity=0.162 Sum_probs=73.2
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCe-EEeee-----------ccCceEEEEECC-CCCEEEEeecCcccccCCeEEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFS-VMNAA-----------EHHQATDVEWDP-TGRYVMSGVSLWKTKADTGYWQ 68 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~-~i~~~-----------~h~~vt~v~WsP-dGr~lat~ss~~~~~~D~~~~I 68 (194)
++|+|+++|+.+ .++.|..||.+... .+.+. +-...+.|+++| +|+.+++.+. .++.|++
T Consensus 98 ~d~~g~l~v~d~--~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~-----~~~~I~~ 170 (329)
T 3fvz_A 98 IDTDGNYWVTDV--ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY-----CNSRIVQ 170 (329)
T ss_dssp ECTTSCEEEEET--TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS-----SCCEEEE
T ss_pred ECCCCCEEEEEC--CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC-----CCCeEEE
Confidence 689999888776 58999999987531 22211 123689999999 8998888751 2789999
Q ss_pred EeecCcEEEeeC------------CCCEEEEEEeeC-CCceecccchhHHH
Q psy13461 69 WSFQGKIIKRFN------------SPTFCQLRWRPR-PASLLSKEQVDKIK 106 (194)
Q Consensus 69 W~~~G~~l~~~~------------~~~~~~~~wrP~-~~~Lls~~~~~~Ik 106 (194)
|+.+|.++.... ......+++.|+ +..+++......|+
T Consensus 171 ~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~ 221 (329)
T 3fvz_A 171 FSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQ 221 (329)
T ss_dssp ECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEE
Confidence 999999888763 123789999998 78778877666554
No 195
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.10 E-value=2.4e-05 Score=67.87 Aligned_cols=101 Identities=12% Similarity=-0.025 Sum_probs=72.0
Q ss_pred CccCCCCEEEEeec-CCCC--eEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEeecCcc----cccCCeEEEEee-c
Q psy13461 1 MKCTMGTHIVLAEL-RDTG--SLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWK----TKADTGYWQWSF-Q 72 (194)
Q Consensus 1 ~fSP~G~~la~ag~-~~dg--~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~----~~~D~~~~IW~~-~ 72 (194)
+.+|+|+++-++.. +.+. +|.++|..+++.+.+........+++||||++|..+...+. ...++.+.+||. +
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 46789998777653 2111 88999999998877654433339999999999998874321 123678999998 4
Q ss_pred CcEEEeeCCC---------CEEEEEEeeCCCceecccc
Q psy13461 73 GKIIKRFNSP---------TFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 73 G~~l~~~~~~---------~~~~~~wrP~~~~Lls~~~ 101 (194)
++.+...... .-..+.|+|+|..|+.+..
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~ 144 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQF 144 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEECCCCCEEEEEec
Confidence 6666655422 2348999999999987653
No 196
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.08 E-value=2.4e-05 Score=64.73 Aligned_cols=92 Identities=9% Similarity=-0.100 Sum_probs=65.3
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEeeC
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRFN 80 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~~ 80 (194)
.|+|+|+.|+.++. .++.|..||.+............++.++|+|+|+++++... ++++.+|+.+|+...-..
T Consensus 51 ~~~~~g~~l~~~d~-~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~------~~~v~~~~~~g~~~~~~~ 123 (305)
T 3dr2_A 51 AWWEAQRTLVWSDL-VGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHCEHG------RRAITRSDADGQAHLLVG 123 (305)
T ss_dssp EEEGGGTEEEEEET-TTTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEEEETT------TTEEEEECTTSCEEEEEC
T ss_pred eEeCCCCEEEEEEC-CCCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEEEECC------CCEEEEECCCCCEEEEEe
Confidence 37899995544443 57899999985432233334466899999999997776553 678999998887432211
Q ss_pred ------CCCEEEEEEeeCCCceecc
Q psy13461 81 ------SPTFCQLRWRPRPASLLSK 99 (194)
Q Consensus 81 ------~~~~~~~~wrP~~~~Lls~ 99 (194)
...++.+++.|+|...+|.
T Consensus 124 ~~~~~~~~~~~~i~~d~dG~l~~td 148 (305)
T 3dr2_A 124 RYAGKRLNSPNDLIVARDGAIWFTD 148 (305)
T ss_dssp EETTEECSCCCCEEECTTSCEEEEC
T ss_pred ccCCCccCCCCCEEECCCCCEEEeC
Confidence 3456789999999999873
No 197
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.03 E-value=4.7e-05 Score=65.98 Aligned_cols=76 Identities=17% Similarity=0.064 Sum_probs=55.1
Q ss_pred CccCCCCEEEEeecC--------CCCeEEEEECCCCeEEeeecc---------CceEEEEECCCCCEEEEeecCcccccC
Q psy13461 1 MKCTMGTHIVLAELR--------DTGSLEFVDTGDFSVMNAAEH---------HQATDVEWDPTGRYVMSGVSLWKTKAD 63 (194)
Q Consensus 1 ~fSP~G~~la~ag~~--------~dg~l~fwD~~~~~~i~~~~h---------~~vt~v~WsPdGr~lat~ss~~~~~~D 63 (194)
+|||||++|.++... .++.|.+||+.+++.+.+..- .....++|||||++|.+++.. .+
T Consensus 72 ~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~----~~ 147 (373)
T 2mad_H 72 VAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA----AG 147 (373)
T ss_pred EECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC----CC
Confidence 489999999888520 257899999998777654321 234579999999999988731 15
Q ss_pred CeEEEEeec-CcEEEe-eCC
Q psy13461 64 TGYWQWSFQ-GKIIKR-FNS 81 (194)
Q Consensus 64 ~~~~IW~~~-G~~l~~-~~~ 81 (194)
+.+.++| . |+.+.. .+.
T Consensus 148 ~~v~viD-~t~~~~~~~i~~ 166 (373)
T 2mad_H 148 PAVGLVV-QGGSSDDQLLSS 166 (373)
T ss_pred CeEEEEE-CCCCEEeEEcCC
Confidence 7899999 6 666666 553
No 198
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.98 E-value=1.7e-05 Score=65.83 Aligned_cols=95 Identities=13% Similarity=0.131 Sum_probs=71.6
Q ss_pred ccCCCCEEEEeecCC-CCeEEEEECCCCeEEeee--------ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec
Q psy13461 2 KCTMGTHIVLAELRD-TGSLEFVDTGDFSVMNAA--------EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ 72 (194)
Q Consensus 2 fSP~G~~la~ag~~~-dg~l~fwD~~~~~~i~~~--------~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~ 72 (194)
++|+|++|++.+ . ++.|..+|. +++.+.+. +|.....++.+|+|.+|++.+. ++.+..||.+
T Consensus 84 ~~~dG~~lv~~~--~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~------~~~v~~~d~~ 154 (276)
T 3no2_A 84 ILPDGNALVAWC--GHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA------TSEVREIAPN 154 (276)
T ss_dssp ECTTSCEEEEEE--STTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT------TTEEEEECTT
T ss_pred ECCCCCEEEEec--CCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC------CCEEEEECCC
Confidence 579999999877 4 677777776 44543321 2334566789999999998874 8899999999
Q ss_pred CcEEEeeC-CCCEEEEEEeeCCCceecccchhHH
Q psy13461 73 GKIIKRFN-SPTFCQLRWRPRPASLLSKEQVDKI 105 (194)
Q Consensus 73 G~~l~~~~-~~~~~~~~wrP~~~~Lls~~~~~~I 105 (194)
|+.+.+.. ....+.....|++..|+++.....|
T Consensus 155 G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v 188 (276)
T 3no2_A 155 GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCF 188 (276)
T ss_dssp SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEE
T ss_pred CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeE
Confidence 99998876 3456678889999999988765433
No 199
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.96 E-value=1.4e-05 Score=70.52 Aligned_cols=87 Identities=7% Similarity=0.017 Sum_probs=63.9
Q ss_pred CCCEEEEeecCCCCeEEEEECCCCeEEee--eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-CcEEEeeCC
Q psy13461 5 MGTHIVLAELRDTGSLEFVDTGDFSVMNA--AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIKRFNS 81 (194)
Q Consensus 5 ~G~~la~ag~~~dg~l~fwD~~~~~~i~~--~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~~l~~~~~ 81 (194)
+|++|+++. +|.|.+||+.+...... .+...+.++.|.|.. +|++.+ |+.+.+||+. |+... ..
T Consensus 96 d~~~L~v~~---~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~------dG~L~v~dl~~~~~~~--~~ 162 (388)
T 1xip_A 96 HGDQVLVST---RNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNT--LVILNS------VNDLSALDLRTKSTKQ--LA 162 (388)
T ss_dssp ETTEEEEEE---SSEEEEEESSSTTCEEEEEECSSCEEEEEECSSE--EEEEET------TSEEEEEETTTCCEEE--EE
T ss_pred CCCEEEEEc---CCcEEEEEchhhhccCccceeecceeeEEecCCC--EEEEEC------CCCEEEEEccCCcccc--cc
Confidence 789999984 79999999986543222 223457888777653 777774 9999999996 55543 35
Q ss_pred CCEEEEEEeeCCCceecccchhHHH
Q psy13461 82 PTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 82 ~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
..|..++|+|+| ++.+..+++|+
T Consensus 163 ~~Vs~v~WSpkG--~~vg~~dg~i~ 185 (388)
T 1xip_A 163 QNVTSFDVTNSQ--LAVLLKDRSFQ 185 (388)
T ss_dssp ESEEEEEECSSE--EEEEETTSCEE
T ss_pred CCceEEEEcCCc--eEEEEcCCcEE
Confidence 689999999999 66677777663
No 200
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.95 E-value=2.9e-05 Score=61.91 Aligned_cols=95 Identities=11% Similarity=0.006 Sum_probs=66.1
Q ss_pred ccCCCCEEE-EeecCCCCeEEEEECCCCeEEee--eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEe
Q psy13461 2 KCTMGTHIV-LAELRDTGSLEFVDTGDFSVMNA--AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKR 78 (194)
Q Consensus 2 fSP~G~~la-~ag~~~dg~l~fwD~~~~~~i~~--~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~ 78 (194)
++|+|++.+ +.+ .++.|..||..+...... .....+.+++++|+|+++++.. ++.+.+||.+|..+..
T Consensus 31 ~~~~g~l~v~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-------~~~i~~~d~~~~~~~~ 101 (270)
T 1rwi_B 31 VDSAGNVYVTSEG--MYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-------NNRVVTLAAGSNNQTV 101 (270)
T ss_dssp ECTTCCEEEEECS--SSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-------TTEEEEECTTCSCCEE
T ss_pred ECCCCCEEEEccC--CCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-------CCEEEEEeCCCceEee
Confidence 679999777 434 478999999876443221 2225688999999999666543 6789999998876654
Q ss_pred eC---CCCEEEEEEeeCCCceecccchhHH
Q psy13461 79 FN---SPTFCQLRWRPRPASLLSKEQVDKI 105 (194)
Q Consensus 79 ~~---~~~~~~~~wrP~~~~Lls~~~~~~I 105 (194)
.. ......+++.|++..+++......|
T Consensus 102 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i 131 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDTQGAVYVADRGNNRV 131 (270)
T ss_dssp CCCCSCSSEEEEEECTTCCEEEEEGGGTEE
T ss_pred eecCCcCCCcceEECCCCCEEEEECCCCEE
Confidence 43 3578999999999988876554433
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.95 E-value=4.1e-05 Score=62.21 Aligned_cols=91 Identities=7% Similarity=0.004 Sum_probs=66.2
Q ss_pred ccCCCCEEEE-------eecCCCCeEEEEECCCCeEEeee------ccCceEEEEECCC-CCEEEEeecCcccccCCeEE
Q psy13461 2 KCTMGTHIVL-------AELRDTGSLEFVDTGDFSVMNAA------EHHQATDVEWDPT-GRYVMSGVSLWKTKADTGYW 67 (194)
Q Consensus 2 fSP~G~~la~-------ag~~~dg~l~fwD~~~~~~i~~~------~h~~vt~v~WsPd-Gr~lat~ss~~~~~~D~~~~ 67 (194)
|+|+|+++++ ++ .++.|..||..+++..... ....+..++++|+ |+++++.. .+++.
T Consensus 25 ~~~~g~l~~~~~~~~~~~~--~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-------~~~l~ 95 (314)
T 1pjx_A 25 FDKNGDFYIVAPEVEVNGK--PAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-------RLGLL 95 (314)
T ss_dssp ECTTSCEEEEETTCEETTE--ECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-------TTEEE
T ss_pred ECCCCCEEEEEeccccCCC--CCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-------CCCEE
Confidence 7899998888 44 4789999998766543221 2256899999999 88666554 45899
Q ss_pred EEeecCcEEEe-eC------CCCEEEEEEeeCCCceecccc
Q psy13461 68 QWSFQGKIIKR-FN------SPTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 68 IW~~~G~~l~~-~~------~~~~~~~~wrP~~~~Lls~~~ 101 (194)
+||.+|+.... .. ...+..+++.|++..+++...
T Consensus 96 ~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 136 (314)
T 1pjx_A 96 VVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPA 136 (314)
T ss_dssp EEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECB
T ss_pred EEeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecC
Confidence 99988775433 21 235789999999998887754
No 202
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.94 E-value=0.00015 Score=60.87 Aligned_cols=91 Identities=14% Similarity=0.090 Sum_probs=66.7
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECC--CC-e-----EEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTG--DF-S-----VMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF 71 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~--~~-~-----~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~ 71 (194)
|||+|++|..+.. .++.|..||++ ++ . .+... .......++++++|++.++... .+++.+||.
T Consensus 186 ~s~dg~~lyv~~~-~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~------~~~v~~~d~ 258 (326)
T 2ghs_A 186 FSPDGTTGYFVDT-KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWG------EGAVDRYDT 258 (326)
T ss_dssp ECTTSCEEEEEET-TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEET------TTEEEEECT
T ss_pred EcCCCCEEEEEEC-CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeC------CCEEEEECC
Confidence 7999997766543 46899999986 44 3 22222 2245788999999998776653 678999999
Q ss_pred cCcEEEeeC--CCCEEEEEEe-eCCCceecc
Q psy13461 72 QGKIIKRFN--SPTFCQLRWR-PRPASLLSK 99 (194)
Q Consensus 72 ~G~~l~~~~--~~~~~~~~wr-P~~~~Lls~ 99 (194)
+|+.+.... ...+..++|. |++..|...
T Consensus 259 ~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt 289 (326)
T 2ghs_A 259 DGNHIARYEVPGKQTTCPAFIGPDASRLLVT 289 (326)
T ss_dssp TCCEEEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred CCCEEEEEECCCCCcEEEEEecCCCCEEEEE
Confidence 998877654 4569999998 998876433
No 203
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.93 E-value=2e-05 Score=74.24 Aligned_cols=98 Identities=7% Similarity=0.039 Sum_probs=61.1
Q ss_pred cc-CCCCEEEEeecC---CCCeEEEEECCCC-eEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCc--
Q psy13461 2 KC-TMGTHIVLAELR---DTGSLEFVDTGDF-SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGK-- 74 (194)
Q Consensus 2 fS-P~G~~la~ag~~---~dg~l~fwD~~~~-~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~-- 74 (194)
|| |||++||-+.-. ...+|.++|++++ +.+...-......++|||||+.|+..+..-. .....+.++++.+.
T Consensus 181 ~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~-~~~~~v~~~~lgt~~~ 259 (751)
T 2xe4_A 181 PAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDET-LRENKVWRHVMGKLQS 259 (751)
T ss_dssp ECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTT-CCEEEEEEEETTSCGG
T ss_pred ecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCC-CCCCEEEEEECCCCch
Confidence 79 999999866421 1235999999988 6432110112457899999999887763100 00124666676432
Q ss_pred ---EEEeeC-CCCEEEEEEeeCCCceeccc
Q psy13461 75 ---IIKRFN-SPTFCQLRWRPRPASLLSKE 100 (194)
Q Consensus 75 ---~l~~~~-~~~~~~~~wrP~~~~Lls~~ 100 (194)
+++... ......+.|+|+|..|+-.+
T Consensus 260 ~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~ 289 (751)
T 2xe4_A 260 EDVCLYEEHNPLFSAFMYKAADTNTLCIGS 289 (751)
T ss_dssp GCEEEEECCCTTCEEEEEECTTSSEEEEEE
T ss_pred hcEEEEecCCCceEEEEEECCCCCEEEEEe
Confidence 444433 23466889999999887554
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.90 E-value=7.4e-05 Score=69.59 Aligned_cols=98 Identities=8% Similarity=-0.044 Sum_probs=64.4
Q ss_pred ccCCCCEEEEeecC-C-----------CCeEEEEECCCCe----EEeeec-c-CceEEEEECCCCCEEEEeecCcccccC
Q psy13461 2 KCTMGTHIVLAELR-D-----------TGSLEFVDTGDFS----VMNAAE-H-HQATDVEWDPTGRYVMSGVSLWKTKAD 63 (194)
Q Consensus 2 fSP~G~~la~ag~~-~-----------dg~l~fwD~~~~~----~i~~~~-h-~~vt~v~WsPdGr~lat~ss~~~~~~D 63 (194)
|||| +.|+.++.. . ...|.+|++.+.. ++.... + ..+..+.|||||++|+.++... ....
T Consensus 216 wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~-~~~~ 293 (741)
T 1yr2_A 216 WLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEG-TDPV 293 (741)
T ss_dssp ESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECT-TCSC
T ss_pred EECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEcc-CCCc
Confidence 8999 988888732 1 2248999987643 444432 2 2488999999999999887521 0125
Q ss_pred CeEEEEeecCc--E-EEee--CCCCEEEEEEeeCCCceecccch
Q psy13461 64 TGYWQWSFQGK--I-IKRF--NSPTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 64 ~~~~IW~~~G~--~-l~~~--~~~~~~~~~wrP~~~~Lls~~~~ 102 (194)
+.+++||+.+. . +..+ ........ |.|++..|+..+..
T Consensus 294 ~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~ 336 (741)
T 1yr2_A 294 NTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGD 336 (741)
T ss_dssp CEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECT
T ss_pred ceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECC
Confidence 58999999643 2 3333 23344444 34999988877654
No 205
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.87 E-value=3.1e-05 Score=68.38 Aligned_cols=97 Identities=10% Similarity=-0.021 Sum_probs=65.3
Q ss_pred CccCCCCEEEEeec-------C-CCCeEEEEECCCCeEEeeecc---------CceEEEEECCCCCEEEEeecCcccccC
Q psy13461 1 MKCTMGTHIVLAEL-------R-DTGSLEFVDTGDFSVMNAAEH---------HQATDVEWDPTGRYVMSGVSLWKTKAD 63 (194)
Q Consensus 1 ~fSP~G~~la~ag~-------~-~dg~l~fwD~~~~~~i~~~~h---------~~vt~v~WsPdGr~lat~ss~~~~~~D 63 (194)
.+||||++|.+++. | .++.|.+||+.+++.+.+..- .....+++||||+++..+... .+
T Consensus 84 a~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~----~~ 159 (386)
T 3sjl_D 84 VVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS----PA 159 (386)
T ss_dssp EECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS----SS
T ss_pred EECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC----CC
Confidence 37999998876641 0 146799999999887765321 235678999999998877531 26
Q ss_pred CeEEEEee-cCcEEEeeCCCCEE---------EEEEeeCCCceecccc
Q psy13461 64 TGYWQWSF-QGKIIKRFNSPTFC---------QLRWRPRPASLLSKEQ 101 (194)
Q Consensus 64 ~~~~IW~~-~G~~l~~~~~~~~~---------~~~wrP~~~~Lls~~~ 101 (194)
+.+.++|. +++.+.+.+..... -++.+|+|..+.-...
T Consensus 160 ~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~ 207 (386)
T 3sjl_D 160 PAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFG 207 (386)
T ss_dssp CEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred CeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECC
Confidence 89999999 47777776543321 1255666665554443
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.87 E-value=5.5e-05 Score=61.45 Aligned_cols=91 Identities=12% Similarity=0.174 Sum_probs=65.2
Q ss_pred CCCCEEEEeecCCCCeEEEEECC-CCeE-----Eeee-cc--CceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-C
Q psy13461 4 TMGTHIVLAELRDTGSLEFVDTG-DFSV-----MNAA-EH--HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-G 73 (194)
Q Consensus 4 P~G~~la~ag~~~dg~l~fwD~~-~~~~-----i~~~-~h--~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G 73 (194)
|+|++|.++.. .++.|..||.+ +++. .... .+ .....++++|+|+++++... ++++.+||.+ |
T Consensus 185 ~dg~~l~v~~~-~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~------~~~i~~~d~~~g 257 (314)
T 1pjx_A 185 GRPYQLIVAET-PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG------SSHIEVFGPDGG 257 (314)
T ss_dssp SCEEEEEEEET-TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET------TTEEEEECTTCB
T ss_pred CCCCEEEEEEC-CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC------CCEEEEEcCCCC
Confidence 99976655543 47899999976 4432 2221 12 45788999999998888764 7899999997 8
Q ss_pred cEEEeeC--CCCEEEEEEeeCCCce-ecccc
Q psy13461 74 KIIKRFN--SPTFCQLRWRPRPASL-LSKEQ 101 (194)
Q Consensus 74 ~~l~~~~--~~~~~~~~wrP~~~~L-ls~~~ 101 (194)
+.+.... ...+..+++.|++..| ++...
T Consensus 258 ~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 258 QPKMRIRCPFEKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp SCSEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred cEeEEEeCCCCCceeEEECCCCCEEEEEeCC
Confidence 8665543 4678999999999844 44443
No 207
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.82 E-value=0.00023 Score=58.55 Aligned_cols=89 Identities=10% Similarity=0.151 Sum_probs=62.5
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEee--
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRF-- 79 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~-- 79 (194)
|+|+++.|..+.. .++.|..||.++.+.........+.+++|+|+|+++++ . ++++.+||..+..+..+
T Consensus 20 w~~~~~~l~~~d~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~-~-------~~~l~~~d~~~g~~~~~~~ 90 (297)
T 3g4e_A 20 WEEVSNSLLFVDI-PAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVAT-I-------GTKFCALNWKEQSAVVLAT 90 (297)
T ss_dssp EETTTTEEEEEET-TTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEE-E-------TTEEEEEETTTTEEEEEEE
T ss_pred EECCCCEEEEEEC-CCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEE-E-------CCeEEEEECCCCcEEEEEe
Confidence 6886665544444 57899999998765533223467999999999997665 3 46899999864333222
Q ss_pred -C----CCCEEEEEEeeCCCceecc
Q psy13461 80 -N----SPTFCQLRWRPRPASLLSK 99 (194)
Q Consensus 80 -~----~~~~~~~~wrP~~~~Lls~ 99 (194)
. ...++.+.+.|+|..+++.
T Consensus 91 ~~~~~~~~~~~di~~d~dG~l~~~~ 115 (297)
T 3g4e_A 91 VDNDKKNNRFNDGKVDPAGRYFAGT 115 (297)
T ss_dssp CCTTCSSEEEEEEEECTTSCEEEEE
T ss_pred cCCCCCCCCCCCEEECCCCCEEEec
Confidence 1 2458899999999977765
No 208
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.81 E-value=0.00011 Score=61.69 Aligned_cols=90 Identities=9% Similarity=-0.022 Sum_probs=62.7
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-CcEEEeeC
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIKRFN 80 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~~l~~~~ 80 (194)
|+|+++.+..++. .++.|..||.++++.........+.+++|+|+|+++++. ++++.+||.. |+...-..
T Consensus 56 ~~~~~~~l~~~d~-~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~--------~~gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 56 FDPASGTAWWFNI-LERELHELHLASGRKTVHALPFMGSALAKISDSKQLIAS--------DDGLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EETTTTEEEEEEG-GGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEE--------TTEEEEEETTTCCEEEEEC
T ss_pred EeCCCCEEEEEEC-CCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEE--------CCCEEEEECCCCcEEEEee
Confidence 7898665544443 478999999987664332223578999999999988864 3478899985 55322111
Q ss_pred ------CCCEEEEEEeeCCCceeccc
Q psy13461 81 ------SPTFCQLRWRPRPASLLSKE 100 (194)
Q Consensus 81 ------~~~~~~~~wrP~~~~Lls~~ 100 (194)
...++.+.+.|+|..+++..
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~ 152 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTM 152 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeC
Confidence 23588999999999777653
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.81 E-value=0.0002 Score=58.95 Aligned_cols=93 Identities=8% Similarity=-0.030 Sum_probs=67.5
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECC--CCeE-----Eeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTG--DFSV-----MNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF 71 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~--~~~~-----i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~ 71 (194)
.|||+|++|..+.. .++.|..||++ ++.+ +... .......+++||+|++.++... .+.+..||.
T Consensus 155 ~~spdg~~lyv~~~-~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~------~~~v~~~d~ 227 (297)
T 3g4e_A 155 DWSLDHKIFYYIDS-LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYN------GGRVIRLDP 227 (297)
T ss_dssp EECTTSCEEEEEEG-GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEET------TTEEEEECT
T ss_pred EEcCCCCEEEEecC-CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcC------CCEEEEEcC
Confidence 37999997755543 47889999874 4433 2221 1245788999999998777663 667999999
Q ss_pred c-CcEEEeeC--CCCEEEEEEe-eCCCceeccc
Q psy13461 72 Q-GKIIKRFN--SPTFCQLRWR-PRPASLLSKE 100 (194)
Q Consensus 72 ~-G~~l~~~~--~~~~~~~~wr-P~~~~Lls~~ 100 (194)
. |+++.... ...+..++|. |++..|.-.+
T Consensus 228 ~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 228 VTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp TTCCEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred CCceEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 6 99888765 4679999999 9988775443
No 210
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.77 E-value=4.9e-05 Score=67.14 Aligned_cols=100 Identities=6% Similarity=-0.035 Sum_probs=70.8
Q ss_pred CccCCCCEEEEeecC---CCCeEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEeecCcc----cccCCeEEEEeec-
Q psy13461 1 MKCTMGTHIVLAELR---DTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWK----TKADTGYWQWSFQ- 72 (194)
Q Consensus 1 ~fSP~G~~la~ag~~---~dg~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~----~~~D~~~~IW~~~- 72 (194)
+..|+|+.+-++..+ .++.|.+.|..+++.+.+.....-..+++||||+++..+++... ...++.+.+||..
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t 118 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT 118 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCcEEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 468999988777642 26799999999998877654322225999999999877763211 1136789999994
Q ss_pred CcEEEeeCC---------CCEEEEEEeeCCCceeccc
Q psy13461 73 GKIIKRFNS---------PTFCQLRWRPRPASLLSKE 100 (194)
Q Consensus 73 G~~l~~~~~---------~~~~~~~wrP~~~~Lls~~ 100 (194)
++.+.+... ..-..+.++|+|..|..+.
T Consensus 119 ~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan 155 (386)
T 3sjl_D 119 LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQ 155 (386)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEE
T ss_pred CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEE
Confidence 666766542 1355789999999877654
No 211
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.76 E-value=7e-05 Score=61.86 Aligned_cols=94 Identities=10% Similarity=0.065 Sum_probs=65.4
Q ss_pred CccCCCCEEEEeecCC----CCeEEEEECCCCeE-----EeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee
Q psy13461 1 MKCTMGTHIVLAELRD----TGSLEFVDTGDFSV-----MNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF 71 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~----dg~l~fwD~~~~~~-----i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~ 71 (194)
.|||+|+.|..+.... ++.|..||++...+ ...........++++|+|++.++. .+++.+|+.
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~--------~~gv~~~~~ 265 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS--------GTGVCVFDS 265 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC--------SSEEEEECT
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec--------CCcEEEECC
Confidence 3899999777765210 26899999875331 111122345678999999965544 247999999
Q ss_pred cCcEEEeeC-CCCEEEEEEeeCCCceecccch
Q psy13461 72 QGKIIKRFN-SPTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 72 ~G~~l~~~~-~~~~~~~~wrP~~~~Lls~~~~ 102 (194)
+|+.+.... ...+..++|.|++..|..++..
T Consensus 266 ~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 266 DGQLLGHIPTPGTASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp TSCEEEEEECSSCCCEEEECTTSCEEEEEETT
T ss_pred CCCEEEEEECCCceeEEEEeCCCCEEEEEcCC
Confidence 999888764 4468899999998877765543
No 212
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.68 E-value=0.00014 Score=61.10 Aligned_cols=88 Identities=13% Similarity=0.174 Sum_probs=63.8
Q ss_pred ccCCCCEEEEeecCCC----------CeEEEEECCCCeEEeeec---cCceEEEEECCCCCEEEEeecCcccccCCeEEE
Q psy13461 2 KCTMGTHIVLAELRDT----------GSLEFVDTGDFSVMNAAE---HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQ 68 (194)
Q Consensus 2 fSP~G~~la~ag~~~d----------g~l~fwD~~~~~~i~~~~---h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~I 68 (194)
++|+|++++++. .+ +.|.++|..+++++.... ....+.++|||+|++|.++.+ .+.+
T Consensus 179 ~~~dG~l~v~~~--~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--------~v~~ 248 (328)
T 3dsm_A 179 MDKYNKMWTITD--GGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--------DIWR 248 (328)
T ss_dssp ECTTSEEEEEBC--CBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--------SEEE
T ss_pred EcCCCCEEEEEC--CCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--------EEEE
Confidence 689999877765 23 789999999887765432 235899999999999887652 7888
Q ss_pred Eeec-CcEEEee--C--CCCEEEEEEee-CCCceecc
Q psy13461 69 WSFQ-GKIIKRF--N--SPTFCQLRWRP-RPASLLSK 99 (194)
Q Consensus 69 W~~~-G~~l~~~--~--~~~~~~~~wrP-~~~~Lls~ 99 (194)
||.. |++.... . ....+.+++.| .+...++.
T Consensus 249 ~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 249 MPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp EETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred EECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 9985 5543221 1 25688999999 56666665
No 213
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.67 E-value=0.00042 Score=55.36 Aligned_cols=92 Identities=5% Similarity=0.020 Sum_probs=67.1
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee---ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA---EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKR 78 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~---~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~ 78 (194)
++|+|++.++.. .++.|..||.+ ++..... ....+.+++++|+|+++++... ++++..|+.+|+...-
T Consensus 22 ~d~~g~l~v~~~--~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~~~ 92 (299)
T 2z2n_A 22 VSDKGKVWITQH--KANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA------ANKIGRITKKGIIKEY 92 (299)
T ss_dssp ECTTSCEEEEET--TTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT------TTEEEEECTTSCEEEE
T ss_pred ECCCCCEEEEec--CCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC------CCeEEEECCCCcEEEE
Confidence 579999877665 47899999988 4433221 2357899999999998887653 6789999988764322
Q ss_pred -e--CCCCEEEEEEeeCCCceecccch
Q psy13461 79 -F--NSPTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 79 -~--~~~~~~~~~wrP~~~~Lls~~~~ 102 (194)
. ....+..+++.|++..+++....
T Consensus 93 ~~~~~~~~~~~i~~~~~g~l~v~~~~~ 119 (299)
T 2z2n_A 93 TLPNPDSAPYGITEGPNGDIWFTEMNG 119 (299)
T ss_dssp ECSSTTCCEEEEEECTTSCEEEEETTT
T ss_pred eCCCcCCCceeeEECCCCCEEEEecCC
Confidence 2 24578899999999888876543
No 214
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.58 E-value=0.00031 Score=65.25 Aligned_cols=94 Identities=14% Similarity=0.203 Sum_probs=66.6
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCCCe------------EEeeec-cCceEEEEECCCCCEEEEeecCcccccCCeEE
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGDFS------------VMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYW 67 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~~~------------~i~~~~-h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~ 67 (194)
.|||||+++++++. .+.+|.++|+.+.+ .+...+ ..+..+++|+|+| ++-+..- .|+.+.
T Consensus 283 ~~sPDGk~v~V~~~-~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~-----ldsqV~ 355 (595)
T 1fwx_A 283 NMAPDKKHLCVAGK-LSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLF-----LDSQVV 355 (595)
T ss_dssp EECTTSSEEEEECT-TSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEET-----TTTEEE
T ss_pred EEcCCCCEEEEeCC-CCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEe-----cCCcEE
Confidence 37999999999987 58999999998653 333332 3568999999999 6555543 699999
Q ss_pred EEeecC-----------cEEEeeCCC-CEEEEEE------eeCCCceecccc
Q psy13461 68 QWSFQG-----------KIIKRFNSP-TFCQLRW------RPRPASLLSKEQ 101 (194)
Q Consensus 68 IW~~~G-----------~~l~~~~~~-~~~~~~w------rP~~~~Lls~~~ 101 (194)
.||++. +.+.+.... ..-+..+ +|+|+.|++...
T Consensus 356 kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 356 KWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp EEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred EEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 999853 345555422 2233444 689988887754
No 215
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.52 E-value=0.00096 Score=53.18 Aligned_cols=91 Identities=2% Similarity=-0.082 Sum_probs=66.1
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEee-e--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNA-A--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKR 78 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~-~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~ 78 (194)
++|+|++.++.. .++.|..||. +++.... . ....+..++++|+|+++++... ++++.+|+.+|....-
T Consensus 148 ~~~~g~l~v~~~--~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~~~ 218 (299)
T 2z2n_A 148 LGSDNALWFTEN--QNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEII------GNKIGRITTSGEITEF 218 (299)
T ss_dssp ECTTSCEEEEET--TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETT------TTEEEEECTTCCEEEE
T ss_pred EcCCCCEEEEeC--CCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccC------CceEEEECCCCcEEEE
Confidence 578998887765 4688999998 5544322 1 2346889999999997776653 7789999997775432
Q ss_pred -eC--CCCEEEEEEeeCCCceecccc
Q psy13461 79 -FN--SPTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 79 -~~--~~~~~~~~wrP~~~~Lls~~~ 101 (194)
.. ...+..+++.|++...++...
T Consensus 219 ~~~~~~~~~~~i~~~~~g~l~v~~~~ 244 (299)
T 2z2n_A 219 KIPTPNARPHAITAGAGIDLWFTEWG 244 (299)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred ECCCCCCCceeEEECCCCCEEEeccC
Confidence 22 367899999999997777533
No 216
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.46 E-value=0.00066 Score=56.89 Aligned_cols=96 Identities=10% Similarity=0.034 Sum_probs=65.5
Q ss_pred CCEEEEeecCCCCeEEEEECCCCeEEeeec-cCceEEEEECCCCCEEEEeecCccc----ccCCeEEEEeec-CcEEEee
Q psy13461 6 GTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKT----KADTGYWQWSFQ-GKIIKRF 79 (194)
Q Consensus 6 G~~la~ag~~~dg~l~fwD~~~~~~i~~~~-h~~vt~v~WsPdGr~lat~ss~~~~----~~D~~~~IW~~~-G~~l~~~ 79 (194)
|..|.+++.+.++.|.++|+.+++.+.+.. ......++++|+|++++++...... ...+.+.++|.. |+.+...
T Consensus 140 ~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~ 219 (328)
T 3dsm_A 140 GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQF 219 (328)
T ss_dssp TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEE
T ss_pred CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEE
Confidence 444444442127899999999888766543 2456789999999988887641100 003789999985 6666555
Q ss_pred CC---CCEEEEEEeeCCCceecccc
Q psy13461 80 NS---PTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 80 ~~---~~~~~~~wrP~~~~Lls~~~ 101 (194)
.. .....++|+|++..|.....
T Consensus 220 ~~~~g~~p~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 220 KFKLGDWPSEVQLNGTRDTLYWINN 244 (328)
T ss_dssp ECCTTCCCEEEEECTTSCEEEEESS
T ss_pred ecCCCCCceeEEEecCCCEEEEEcc
Confidence 42 36899999999988866543
No 217
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.39 E-value=0.001 Score=56.01 Aligned_cols=98 Identities=11% Similarity=0.011 Sum_probs=64.0
Q ss_pred ccCCCCEEEEeecC---CCCeEEEEECCCCeEEeeec--------cCceEEEEECCCCCE-EEEeecCcccccCCeEEEE
Q psy13461 2 KCTMGTHIVLAELR---DTGSLEFVDTGDFSVMNAAE--------HHQATDVEWDPTGRY-VMSGVSLWKTKADTGYWQW 69 (194)
Q Consensus 2 fSP~G~~la~ag~~---~dg~l~fwD~~~~~~i~~~~--------h~~vt~v~WsPdGr~-lat~ss~~~~~~D~~~~IW 69 (194)
|+|+|++.|+..-. .++.|..||+.+++++.+.. ...+++++++|++.+ ++|.++. ..++++.+|
T Consensus 74 ~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~---~~~~~i~v~ 150 (343)
T 2qe8_A 74 SDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP---DDKAALIRV 150 (343)
T ss_dssp ECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS---GGGCEEEEE
T ss_pred EcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc---CCCCeEEEE
Confidence 68999977765310 14789999998877554321 124689999997544 4554310 127789999
Q ss_pred eec-CcEEEeeCC-------------------------------CCEEEEEEeeCCCceecccch
Q psy13461 70 SFQ-GKIIKRFNS-------------------------------PTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 70 ~~~-G~~l~~~~~-------------------------------~~~~~~~wrP~~~~Lls~~~~ 102 (194)
|.. |+..+.... ...+.++|+|++..|..++..
T Consensus 151 d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~ 215 (343)
T 2qe8_A 151 DLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH 215 (343)
T ss_dssp ETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS
T ss_pred ECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC
Confidence 985 655443211 235789999999988876644
No 218
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.30 E-value=0.001 Score=58.00 Aligned_cols=98 Identities=7% Similarity=0.024 Sum_probs=66.3
Q ss_pred ccCC-CCEEEEeecCCCCeEEEEECCCCeEEeeec---------------cCceEEEEECCCCCEEEEee-cCcccccCC
Q psy13461 2 KCTM-GTHIVLAELRDTGSLEFVDTGDFSVMNAAE---------------HHQATDVEWDPTGRYVMSGV-SLWKTKADT 64 (194)
Q Consensus 2 fSP~-G~~la~ag~~~dg~l~fwD~~~~~~i~~~~---------------h~~vt~v~WsPdGr~lat~s-s~~~~~~D~ 64 (194)
|+|+ |.+.++.. .++.|..||.+.......+. ......++++|+|+++++-+ . .+
T Consensus 274 ~~p~~g~lyv~d~--~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~------~~ 345 (409)
T 3hrp_A 274 YYFVDSNFYMSDQ--NLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK------GY 345 (409)
T ss_dssp EETTTTEEEEEET--TTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT------TC
T ss_pred EeCCCCEEEEEeC--CCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC------CC
Confidence 7895 55555544 57899999987532222221 13478999999999777755 4 77
Q ss_pred eEEEEee-cCcEEEeeC----------------CCCEEEEEEeeCCCceecccchhHHHh
Q psy13461 65 GYWQWSF-QGKIIKRFN----------------SPTFCQLRWRPRPASLLSKEQVDKIKK 107 (194)
Q Consensus 65 ~~~IW~~-~G~~l~~~~----------------~~~~~~~~wrP~~~~Lls~~~~~~Ikk 107 (194)
.|+.|+. +|....-.. ...-..+++.|++..+++......||+
T Consensus 346 ~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~ 405 (409)
T 3hrp_A 346 CLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRK 405 (409)
T ss_dssp EEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEE
T ss_pred EEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEE
Confidence 8999994 565432211 245788999999988888776666653
No 219
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.30 E-value=0.0026 Score=50.63 Aligned_cols=92 Identities=5% Similarity=-0.047 Sum_probs=67.2
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEee--e-ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNA--A-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKR 78 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~--~-~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~ 78 (194)
++|+|+..++.. .++.|..||.+ ++.... . ....+..++++|+|+++++... ++.+..||.+|+....
T Consensus 27 ~d~~g~l~v~~~--~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~------~~~v~~~d~~g~~~~~ 97 (300)
T 2qc5_A 27 SSEDGKVWFTQH--KANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENG------ANKIGKLSKKGGFTEY 97 (300)
T ss_dssp ECTTSCEEEEET--TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT------TTEEEEECTTSCEEEE
T ss_pred ECCCCCEEEEcC--CCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecC------CCeEEEECCCCCeEEe
Confidence 578999887765 47899999988 444321 1 1257899999999998776653 6789999988776432
Q ss_pred -eC--CCCEEEEEEeeCCCceecccch
Q psy13461 79 -FN--SPTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 79 -~~--~~~~~~~~wrP~~~~Lls~~~~ 102 (194)
.+ ......+++.|++...++....
T Consensus 98 ~~~~~~~~~~~i~~~~~g~l~v~~~~~ 124 (300)
T 2qc5_A 98 PLPQPDSGPYGITEGLNGDIWFTQLNG 124 (300)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred cCCCCCCCCccceECCCCCEEEEccCC
Confidence 22 3678999999999888876533
No 220
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.29 E-value=0.00062 Score=57.31 Aligned_cols=97 Identities=6% Similarity=0.015 Sum_probs=64.5
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCC---Ce---------EEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGD---FS---------VMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQW 69 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~---~~---------~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW 69 (194)
|||+|++|..+.. ....|.-+|+.. +. ....++......+++||+|+++++... .+.|.+|
T Consensus 202 ~s~dg~~ly~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~------~~~V~~~ 274 (343)
T 2qe8_A 202 LDAENEWLYLSPM-HSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLA------HSAIGVI 274 (343)
T ss_dssp ECTTSCEEEEEES-SCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGG------GTEEEEE
T ss_pred eccCCCEEEEEeC-CCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccC------CCeEEEE
Confidence 6899988877763 233454444321 00 001122234567999999999888774 7899999
Q ss_pred ee-cCcEEEee--C-CCCEEEEEEeeCCCceecccchhHH
Q psy13461 70 SF-QGKIIKRF--N-SPTFCQLRWRPRPASLLSKEQVDKI 105 (194)
Q Consensus 70 ~~-~G~~l~~~--~-~~~~~~~~wrP~~~~Lls~~~~~~I 105 (194)
|. +|+..... + ......+++.|++..+++.+....+
T Consensus 275 d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 275 TSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp ETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred ECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccc
Confidence 99 88754332 2 3457899999999988888866444
No 221
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.29 E-value=0.0015 Score=60.47 Aligned_cols=94 Identities=7% Similarity=0.057 Sum_probs=58.6
Q ss_pred ccCCCCEEEEeecCC-----------CCeEEEEECCCC----eEEeeec--c-CceEEEEECCCCCEEEEeecCcccccC
Q psy13461 2 KCTMGTHIVLAELRD-----------TGSLEFVDTGDF----SVMNAAE--H-HQATDVEWDPTGRYVMSGVSLWKTKAD 63 (194)
Q Consensus 2 fSP~G~~la~ag~~~-----------dg~l~fwD~~~~----~~i~~~~--h-~~vt~v~WsPdGr~lat~ss~~~~~~D 63 (194)
|| ||+.|+.++... ...|.+|++.+. .++.... | ..+..+.|||||++|+..++. ....
T Consensus 182 Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~--~~~~ 258 (693)
T 3iuj_A 182 WL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAAN--STSG 258 (693)
T ss_dssp EE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEES--SSSC
T ss_pred Ee-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEcc--CCCC
Confidence 78 999888887310 134999998763 3455432 2 246889999999998765531 1124
Q ss_pred CeEEEEeecCc--EEEee--CCCCEEEEEEeeCCCceecc
Q psy13461 64 TGYWQWSFQGK--IIKRF--NSPTFCQLRWRPRPASLLSK 99 (194)
Q Consensus 64 ~~~~IW~~~G~--~l~~~--~~~~~~~~~wrP~~~~Lls~ 99 (194)
+.++++|+.+. .+..+ ..+..... |+|++..|+-.
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~ 297 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLL 297 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEE
T ss_pred cEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEE
Confidence 68999998532 23332 24444444 77777665533
No 222
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.28 E-value=0.0023 Score=57.70 Aligned_cols=98 Identities=12% Similarity=0.160 Sum_probs=71.6
Q ss_pred Ccc--CCCCEEEEeecCCCCeEEEEECCCC----eEEeeec--------c-CceEEEEECCCCCEEEEeecCcccccCCe
Q psy13461 1 MKC--TMGTHIVLAELRDTGSLEFVDTGDF----SVMNAAE--------H-HQATDVEWDPTGRYVMSGVSLWKTKADTG 65 (194)
Q Consensus 1 ~fS--P~G~~la~ag~~~dg~l~fwD~~~~----~~i~~~~--------h-~~vt~v~WsPdGr~lat~ss~~~~~~D~~ 65 (194)
++| +++++|++.++ .++.|.+.|+.+. +++.+.+ . ..-..+..+|+| .++|+.+.......++
T Consensus 88 ~~~~~~~r~~l~v~~l-~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~ 165 (462)
T 2ece_A 88 NGKPNIERRFLIVPGL-RSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGG 165 (462)
T ss_dssp TCCTTCCSCEEEEEBT-TTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCE
T ss_pred ccCCCccCCEEEEccC-CCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCe
Confidence 457 99999999998 4899999998643 5555442 1 134567889999 6666665434445589
Q ss_pred EEEEeec-CcEEEeeCCC-----CEEEEEEeeCCCceeccc
Q psy13461 66 YWQWSFQ-GKIIKRFNSP-----TFCQLRWRPRPASLLSKE 100 (194)
Q Consensus 66 ~~IW~~~-G~~l~~~~~~-----~~~~~~wrP~~~~Lls~~ 100 (194)
|.+.|.. ++.+.+.... --++|.|+|+++.++|.+
T Consensus 166 v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~ 206 (462)
T 2ece_A 166 ILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSE 206 (462)
T ss_dssp EEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECB
T ss_pred EEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEcc
Confidence 9999985 7888777522 245799999999999885
No 223
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.25 E-value=0.0033 Score=50.05 Aligned_cols=92 Identities=7% Similarity=0.030 Sum_probs=66.9
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEe-ee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMN-AA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKR 78 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~-~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~ 78 (194)
++|+|++.++.. .++.|..+|.+ ++... .. ....+.+++++|+|+++++... ++++..++.+|+....
T Consensus 69 ~~~~g~l~v~~~--~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~~~ 139 (300)
T 2qc5_A 69 VSSLGDIWFTEN--GANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN------GDRIGKLTADGTIYEY 139 (300)
T ss_dssp ECTTSCEEEEET--TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETT------TTEEEEECTTSCEEEE
T ss_pred ECCCCCEEEEec--CCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccC------CCeEEEECCCCCEEEc
Confidence 568898777665 47889999987 44322 21 2356899999999998887653 6788899988876532
Q ss_pred -eC--CCCEEEEEEeeCCCceecccch
Q psy13461 79 -FN--SPTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 79 -~~--~~~~~~~~wrP~~~~Lls~~~~ 102 (194)
.. ......+++.|++...++....
T Consensus 140 ~~~~~~~~~~~i~~d~~g~l~v~~~~~ 166 (300)
T 2qc5_A 140 DLPNKGSYPAFITLGSDNALWFTENQN 166 (300)
T ss_dssp ECSSTTCCEEEEEECTTSSEEEEETTT
T ss_pred cCCCCCCCceeEEECCCCCEEEEecCC
Confidence 22 4578899999999977766543
No 224
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.22 E-value=0.00066 Score=59.28 Aligned_cols=87 Identities=9% Similarity=-0.019 Sum_probs=59.4
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeecc-CceEEEEECCCCCEEEEeecCcccccCC--eEEEEeecC-cEEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADT--GYWQWSFQG-KIIK 77 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h-~~vt~v~WsPdGr~lat~ss~~~~~~D~--~~~IW~~~G-~~l~ 77 (194)
|+|+|+++++.. .++.|..||.+++.+...... .... ++|+|+|++|.++.. ++ .+.+|+..+ ..+.
T Consensus 138 ~d~~g~lyv~d~--~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~------~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 138 AVGNNTVLAYQR--DDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGW------EGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp ECSTTEEEEEET--TTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBS------STTCEEEEEEGGGTTCEE
T ss_pred EeCCCCEEEEec--CCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEec------CCCceEEEEEcCCCceeE
Confidence 689999777766 578999999987665443222 2233 999999998887764 33 677777753 3333
Q ss_pred ee------CCCCEEEEEEee-CCCcee
Q psy13461 78 RF------NSPTFCQLRWRP-RPASLL 97 (194)
Q Consensus 78 ~~------~~~~~~~~~wrP-~~~~Ll 97 (194)
.. .......++++| ++..++
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv 235 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYF 235 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEE
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEE
Confidence 33 345678899999 555444
No 225
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.22 E-value=0.00055 Score=60.99 Aligned_cols=99 Identities=7% Similarity=-0.009 Sum_probs=69.3
Q ss_pred CccCCCCEEEEeecCCC----CeEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEeecCc----ccccCCeEEEEee-
Q psy13461 1 MKCTMGTHIVLAELRDT----GSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLW----KTKADTGYWQWSF- 71 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~d----g~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~----~~~~D~~~~IW~~- 71 (194)
|-.|+|+.+.++.-+ + ++|.++|+.+++.+.+..-.....+++||||++|..+.+.+ +...++.+.++|.
T Consensus 79 ~p~~~~~~vyV~n~~-~~~~~~~VsVID~~t~~vv~~I~vG~~Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 79 APAPDARRVYIQDPA-HFAAITQQFVIDGSTGRILGMTDGGFLPHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp CCCCCTTEEEEEECT-TTCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred cCCCCCCEEEEECCC-cCCCCCeEEEEECCCCEEEEEEECCCCCceEECCCCCEEEEEeccccccccCCCCCEEEEEECC
Confidence 345788877666532 2 79999999999888765422112899999999988876421 1123678999998
Q ss_pred cCcEEEeeCC---------CCEEEEEEeeCCCceeccc
Q psy13461 72 QGKIIKRFNS---------PTFCQLRWRPRPASLLSKE 100 (194)
Q Consensus 72 ~G~~l~~~~~---------~~~~~~~wrP~~~~Lls~~ 100 (194)
+++.+.+... ..-..+.++|+|..|..+.
T Consensus 158 t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n 195 (426)
T 3c75_H 158 TFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQ 195 (426)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEE
T ss_pred CCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEe
Confidence 5777766542 2345789999999888754
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.14 E-value=0.0017 Score=58.68 Aligned_cols=94 Identities=7% Similarity=-0.016 Sum_probs=64.0
Q ss_pred ccCCCCEEEEeec---C-CCCeEEEEECCCCe-----EEeeec-----------------cCceEEEEECCCCCEEEEee
Q psy13461 2 KCTMGTHIVLAEL---R-DTGSLEFVDTGDFS-----VMNAAE-----------------HHQATDVEWDPTGRYVMSGV 55 (194)
Q Consensus 2 fSP~G~~la~ag~---~-~dg~l~fwD~~~~~-----~i~~~~-----------------h~~vt~v~WsPdGr~lat~s 55 (194)
|||+|+++-+++- . .+++|.+|..+.+. .+.... ....++|..|||||||.++.
T Consensus 260 ~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSn 339 (462)
T 2ece_A 260 HDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSL 339 (462)
T ss_dssp SSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEE
T ss_pred ECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEe
Confidence 6999998776651 0 25778766544332 111100 24578999999999998887
Q ss_pred cCcccccCCeEEEEeec----CcEEEeeCCC----------------CEEEEEEeeCCCceeccc
Q psy13461 56 SLWKTKADTGYWQWSFQ----GKIIKRFNSP----------------TFCQLRWRPRPASLLSKE 100 (194)
Q Consensus 56 s~~~~~~D~~~~IW~~~----G~~l~~~~~~----------------~~~~~~wrP~~~~Lls~~ 100 (194)
. ..+.+.++|+. .+++...... .=..|.++|+|+.|+.+.
T Consensus 340 r-----g~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 340 W-----GIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp T-----TTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred C-----CCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 5 58899999983 3555555432 126789999999888776
No 227
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.08 E-value=0.0022 Score=55.86 Aligned_cols=86 Identities=9% Similarity=-0.043 Sum_probs=57.2
Q ss_pred ccCCCCEEEEeec---C----CCCeEEEEECCCCeEEeeecc-CceEEEEECCCCCEEEEeecCcccccCCeEEEEee-c
Q psy13461 2 KCTMGTHIVLAEL---R----DTGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-Q 72 (194)
Q Consensus 2 fSP~G~~la~ag~---~----~dg~l~fwD~~~~~~i~~~~h-~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~ 72 (194)
|+|+|+.+.++.- + .++.+.++|+.+.+.+.+..- .....++|+|||++++.+.. ..+|.+.++|. +
T Consensus 271 ~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~----~~~~~VsVID~~t 346 (368)
T 1mda_H 271 KLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANS----AGTEVLDIYDAAS 346 (368)
T ss_dssp EETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEE----TTTTEEEEEESSS
T ss_pred EcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEcc----CCCCeEEEEECCC
Confidence 7899987765531 1 013566999999888776432 36889999999985433331 02899999999 5
Q ss_pred CcEEEeeC-CCCEEEEEEee
Q psy13461 73 GKIIKRFN-SPTFCQLRWRP 91 (194)
Q Consensus 73 G~~l~~~~-~~~~~~~~wrP 91 (194)
++.+.+.+ ...-..+++++
T Consensus 347 ~kvv~~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 347 DQDQSSVELDKGPESLSVQN 366 (368)
T ss_dssp CEEEEECCCCSCCCEEECCC
T ss_pred CcEEEEEECCCCCCEEEeec
Confidence 88887776 33334444443
No 228
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.07 E-value=0.0014 Score=58.38 Aligned_cols=85 Identities=9% Similarity=0.028 Sum_probs=59.2
Q ss_pred ccCCCCEEEEeec-C-------CCCeEEEEECCCCeEEeeecc-CceEEEEECCCCC-EEEEeecCcccccCCeEEEEee
Q psy13461 2 KCTMGTHIVLAEL-R-------DTGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGR-YVMSGVSLWKTKADTGYWQWSF 71 (194)
Q Consensus 2 fSP~G~~la~ag~-~-------~dg~l~fwD~~~~~~i~~~~h-~~vt~v~WsPdGr-~lat~ss~~~~~~D~~~~IW~~ 71 (194)
|||+|+.+.++.- + .+++|-+.|+.+++.+.+..- .....|+|+|||+ +++++.. .++.+.++|.
T Consensus 326 ~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~-----~s~~VsVID~ 400 (426)
T 3c75_H 326 YHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSA-----GTQTLHIYDA 400 (426)
T ss_dssp EEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEET-----TTTEEEEEET
T ss_pred EcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcC-----CCCeEEEEEC
Confidence 6788885555420 0 135799999999888876543 3488999999999 7777763 3899999999
Q ss_pred -cCcEEEee-CCCCEEEEEEee
Q psy13461 72 -QGKIIKRF-NSPTFCQLRWRP 91 (194)
Q Consensus 72 -~G~~l~~~-~~~~~~~~~wrP 91 (194)
+++.+.+. ....-..+..+|
T Consensus 401 ~t~kvv~tI~~vG~~P~~i~~~ 422 (426)
T 3c75_H 401 ATGEELRSVDQLGRGPQIITTH 422 (426)
T ss_dssp TTCCEEEEECCCSSSCCEEECC
T ss_pred CCCCEEEEecCCCCCCcEEEcC
Confidence 58888775 333333344444
No 229
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.89 E-value=0.0016 Score=56.72 Aligned_cols=81 Identities=11% Similarity=-0.122 Sum_probs=60.4
Q ss_pred eEEEEECCCCeEEeeecc-CceEEEEECCCCCEEEEeecCc----ccccCCeEEEEee-cCcEEEeeCC---------CC
Q psy13461 19 SLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLW----KTKADTGYWQWSF-QGKIIKRFNS---------PT 83 (194)
Q Consensus 19 ~l~fwD~~~~~~i~~~~h-~~vt~v~WsPdGr~lat~ss~~----~~~~D~~~~IW~~-~G~~l~~~~~---------~~ 83 (194)
+|-+.|.++++.+.+..- ..- .+.+||||+++..+.+.. +...++.+.+||. +++.+.+... ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~ 125 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPR 125 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCC
T ss_pred eEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCC
Confidence 888999999998876532 122 899999999998887421 1124788999999 5888877642 23
Q ss_pred EEEEEEeeCCCceeccc
Q psy13461 84 FCQLRWRPRPASLLSKE 100 (194)
Q Consensus 84 ~~~~~wrP~~~~Lls~~ 100 (194)
-..++++|+|..|..+.
T Consensus 126 P~~ia~SpDGk~lyVan 142 (368)
T 1mda_H 126 VHIIGNCASSACLLFFL 142 (368)
T ss_dssp TTSEEECTTSSCEEEEE
T ss_pred cceEEEcCCCCEEEEEc
Confidence 56889999999888654
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.84 E-value=0.0068 Score=50.68 Aligned_cols=90 Identities=12% Similarity=0.144 Sum_probs=66.2
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeec-------cCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cC
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-------HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QG 73 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~-------h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G 73 (194)
++|||+.|.++. .++.|.+.|..+++.+.+.. ...++.++|. +|+..|+.. .++.+.+-|. +|
T Consensus 112 lt~Dg~~l~vs~--gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~------~~~~V~vID~~tg 182 (266)
T 2iwa_A 112 LATDGKILYGSD--GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIW------QTDCIARISAKDG 182 (266)
T ss_dssp EEECSSSEEEEC--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET------TSSEEEEEETTTC
T ss_pred EEECCCEEEEEC--CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecC------CCCeEEEEECCCC
Confidence 578998777776 47899999999877655422 1247889999 887665554 3778999998 68
Q ss_pred cEEEeeCC---------------CCEEEEEEeeCCCceeccc
Q psy13461 74 KIIKRFNS---------------PTFCQLRWRPRPASLLSKE 100 (194)
Q Consensus 74 ~~l~~~~~---------------~~~~~~~wrP~~~~Lls~~ 100 (194)
+.+..... ...+.++|.|++..|+...
T Consensus 183 ~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 183 TLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp CEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred cEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence 88777642 3568999999987665544
No 231
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.66 E-value=0.011 Score=49.61 Aligned_cols=90 Identities=12% Similarity=0.236 Sum_probs=64.5
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeec-------cCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cC
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-------HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QG 73 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~-------h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G 73 (194)
++|+|+.|+++. .++.|.|+|..+++.+.+.. ...++.++|. +|+..|..- .++.|.+-|. +|
T Consensus 132 lt~dg~~L~~Sd--Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w------~~~~I~vIDp~tG 202 (262)
T 3nol_A 132 LTHNDQYLIMSD--GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVW------QTNKIVRIDPETG 202 (262)
T ss_dssp EEECSSCEEECC--SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEET------TSSEEEEECTTTC
T ss_pred EecCCCEEEEEC--CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEc------cCCeEEEEECCCC
Confidence 467888777765 36789999999877665421 2456788998 887665443 3778888887 58
Q ss_pred cEEEeeCC--------------CCEEEEEEeeCCCceeccc
Q psy13461 74 KIIKRFNS--------------PTFCQLRWRPRPASLLSKE 100 (194)
Q Consensus 74 ~~l~~~~~--------------~~~~~~~wrP~~~~Lls~~ 100 (194)
+.+..... +..+.++|.|+...|.-.+
T Consensus 203 ~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 203 KVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp BEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred cEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 87766432 3578999999988776655
No 232
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.62 E-value=0.009 Score=56.08 Aligned_cols=69 Identities=6% Similarity=-0.076 Sum_probs=46.3
Q ss_pred ccCCCCEEEEeecCCC---CeEEEEECCCCe----EEeeec-cCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecC
Q psy13461 2 KCTMGTHIVLAELRDT---GSLEFVDTGDFS----VMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQG 73 (194)
Q Consensus 2 fSP~G~~la~ag~~~d---g~l~fwD~~~~~----~i~~~~-h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G 73 (194)
|||||+.|+....... ..|.++++.+.. ++.... ......+.|||||++|+..+.. ...+.++++|+.+
T Consensus 228 WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~---~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 228 WGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQS---PETAEVHLLDLRK 304 (751)
T ss_dssp ECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEEC---SSCEEEEEEESSS
T ss_pred EecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecC---CCCceEEEEECCC
Confidence 7999998887763211 368888887642 443322 2346789999999999877642 1255678888864
No 233
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.54 E-value=0.0069 Score=56.25 Aligned_cols=82 Identities=7% Similarity=-0.024 Sum_probs=54.6
Q ss_pred eEEEEECCC--CeE-Eeee-ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCc-------------EEEeeC-
Q psy13461 19 SLEFVDTGD--FSV-MNAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGK-------------IIKRFN- 80 (194)
Q Consensus 19 ~l~fwD~~~--~~~-i~~~-~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~-------------~l~~~~- 80 (194)
.|-+.|..+ ++. +... -.....+|.+||||+|+.+++. .++.+.++|+... .+.+..
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~-----~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v 329 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGK-----LSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL 329 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECT-----TSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC
T ss_pred cEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCC-----CCCeEEEEECcccccccccccCcccceEEEcCC
Confidence 366667665 322 2222 1234567899999999988885 5899999999733 233433
Q ss_pred CCCEEEEEEeeCCCceecccchhHH
Q psy13461 81 SPTFCQLRWRPRPASLLSKEQVDKI 105 (194)
Q Consensus 81 ~~~~~~~~wrP~~~~Lls~~~~~~I 105 (194)
-..-.+++|+|+|...++..-+.+|
T Consensus 330 G~gP~h~aF~~dG~aY~t~~ldsqV 354 (595)
T 1fwx_A 330 GLGPLHTAFDGRGNAYTSLFLDSQV 354 (595)
T ss_dssp CSCEEEEEECTTSEEEEEETTTTEE
T ss_pred CCCcceEEECCCCeEEEEEecCCcE
Confidence 5678999999999544555555544
No 234
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.49 E-value=0.014 Score=49.13 Aligned_cols=90 Identities=11% Similarity=0.214 Sum_probs=64.9
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeec-------cCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cC
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-------HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QG 73 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~-------h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G 73 (194)
++|+|+.|.++. .++.|.|+|..+++.+.+.. ...++.++|. +|+..|..- .++.|.+-|. +|
T Consensus 141 Lt~Dg~~L~vSd--Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw------~s~~I~vIDp~TG 211 (268)
T 3nok_A 141 LCYWNGKLVRSD--GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIW------HSSDVLEIDPATG 211 (268)
T ss_dssp EEEETTEEEEEC--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET------TCSEEEEECTTTC
T ss_pred EecCCCEEEEEC--CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEEC------CCCeEEEEeCCCC
Confidence 467888877776 48899999999887765421 2357889998 887665443 2677888887 57
Q ss_pred cEEEeeC---------------CCCEEEEEEeeCCCceeccc
Q psy13461 74 KIIKRFN---------------SPTFCQLRWRPRPASLLSKE 100 (194)
Q Consensus 74 ~~l~~~~---------------~~~~~~~~wrP~~~~Lls~~ 100 (194)
+.+.... .+-.+.++|.|++..|+-.+
T Consensus 212 ~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 212 TVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp BEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred cEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 7766543 13679999999887776554
No 235
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.22 E-value=0.027 Score=46.33 Aligned_cols=89 Identities=6% Similarity=-0.008 Sum_probs=62.4
Q ss_pred cCCCCEEEEeecCCCCeEEEEECCC-Ce-----EEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEE
Q psy13461 3 CTMGTHIVLAELRDTGSLEFVDTGD-FS-----VMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKII 76 (194)
Q Consensus 3 SP~G~~la~ag~~~dg~l~fwD~~~-~~-----~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l 76 (194)
||+|++|..+.. .++.|..+|++. ++ .... ......++++|+|+++++... .+.|.+++-+|++.
T Consensus 175 s~dg~~lyv~d~-~~~~I~~~~~~~~g~~~~~~~~~~--~~~P~gi~vd~dG~l~va~~~------~~~V~~~~~~G~~~ 245 (306)
T 2p4o_A 175 KRFGNFLYVSNT-EKMLLLRIPVDSTDKPGEPEIFVE--QTNIDDFAFDVEGNLYGATHI------YNSVVRIAPDRSTT 245 (306)
T ss_dssp EEETTEEEEEET-TTTEEEEEEBCTTSCBCCCEEEEE--SCCCSSEEEBTTCCEEEECBT------TCCEEEECTTCCEE
T ss_pred CcCCCEEEEEeC-CCCEEEEEEeCCCCCCCccEEEec--cCCCCCeEECCCCCEEEEeCC------CCeEEEECCCCCEE
Confidence 688887766654 478999999874 32 1211 134577899999998777663 67899999999874
Q ss_pred E--eeC--CCCEEEEEEe---eCCCceeccc
Q psy13461 77 K--RFN--SPTFCQLRWR---PRPASLLSKE 100 (194)
Q Consensus 77 ~--~~~--~~~~~~~~wr---P~~~~Lls~~ 100 (194)
. ... ......++|. |++..|.-.+
T Consensus 246 ~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 246 IIAQAEQGVIGSTAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp EEECGGGTCTTEEEEEECCSTTTTTEEEEEE
T ss_pred EEeecccccCCceEEEEecccCCCCEEEEEC
Confidence 3 333 4678899998 8977665443
No 236
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.13 E-value=0.035 Score=45.86 Aligned_cols=90 Identities=10% Similarity=0.236 Sum_probs=63.0
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeec-------cCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cC
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-------HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QG 73 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~-------h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G 73 (194)
++++|+.|.++. .++.|.|+|..+++.+.+.. ...++.++|. +|+..|..- .++.|.+-|. +|
T Consensus 110 lt~dg~~L~vSd--gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw------~s~~I~vIDp~tG 180 (243)
T 3mbr_X 110 LTSDDSHLYMSD--GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVW------LTSRIARIDPASG 180 (243)
T ss_dssp EEECSSCEEEEC--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET------TTTEEEEECTTTC
T ss_pred EeeCCCEEEEEC--CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEEC------CCCeEEEEECCCC
Confidence 356777666665 47899999999877655421 2467889988 887665443 2668888887 57
Q ss_pred cEEEeeC---------------CCCEEEEEEeeCCCceeccc
Q psy13461 74 KIIKRFN---------------SPTFCQLRWRPRPASLLSKE 100 (194)
Q Consensus 74 ~~l~~~~---------------~~~~~~~~wrP~~~~Lls~~ 100 (194)
+.+.... .+-.+.++|.|.+..|+-.+
T Consensus 181 ~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 181 KVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp BEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 7766542 13578999999887776554
No 237
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=95.79 E-value=0.0096 Score=50.90 Aligned_cols=67 Identities=12% Similarity=0.081 Sum_probs=44.1
Q ss_pred CCCEEEEeecCCCCeEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEee
Q psy13461 5 MGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKRF 79 (194)
Q Consensus 5 ~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~~ 79 (194)
+|..|++++ .||.|..||..+++.+-+.....+.+..+.++|+.+++++. |+.+..||. +|+.+.+.
T Consensus 8 ~~~~v~~gs--~dg~v~a~d~~tG~~~W~~~~~~~~s~p~~~~g~~~v~~s~------dg~l~a~d~~tG~~~w~~ 75 (369)
T 2hz6_A 8 PETLLFVST--LDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAFLPDPN------DGSLYTLGSKNNEGLTKL 75 (369)
T ss_dssp CTTEEEEEE--TTSEEEEEETTTCCEEEEEECCCSCCCC-----CCEEECTT------TCCEEEC-----CCSEEC
T ss_pred eCCEEEEEc--CCCEEEEEECCCCCEEEEecCCCceecceEcCCCEEEEeCC------CCEEEEEECCCCceeeee
Confidence 577888888 69999999999988775543345555566788887777663 899999999 68876554
No 238
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.70 E-value=0.14 Score=40.84 Aligned_cols=92 Identities=9% Similarity=-0.017 Sum_probs=60.3
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEee--eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEee
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNA--AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRF 79 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~--~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~ 79 (194)
++|+++.|..+.. .++.|..+|.++...... ........++++|+|.+|..+.. ..+.+.+++.+|......
T Consensus 43 ~d~~~~~ly~~d~-~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~-----~~~~I~~~~~~g~~~~~~ 116 (267)
T 1npe_A 43 FDCVDKVVYWTDI-SEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDS-----QLDRIEVAKMDGTQRRVL 116 (267)
T ss_dssp EETTTTEEEEEET-TTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCSCEEE
T ss_pred EecCCCEEEEEEC-CCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEEC-----CCCEEEEEEcCCCCEEEE
Confidence 5787776666654 478999999876432222 12246789999998766655543 367888999988643332
Q ss_pred ---CCCCEEEEEEeeCCCce-ecc
Q psy13461 80 ---NSPTFCQLRWRPRPASL-LSK 99 (194)
Q Consensus 80 ---~~~~~~~~~wrP~~~~L-ls~ 99 (194)
....-..+++.|++..| ++.
T Consensus 117 ~~~~~~~P~~i~vd~~~g~lyv~~ 140 (267)
T 1npe_A 117 FDTGLVNPRGIVTDPVRGNLYWTD 140 (267)
T ss_dssp ECSSCSSEEEEEEETTTTEEEEEE
T ss_pred EECCCCCccEEEEeeCCCEEEEEE
Confidence 23567899999965444 443
No 239
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.60 E-value=0.15 Score=41.82 Aligned_cols=94 Identities=12% Similarity=0.018 Sum_probs=56.9
Q ss_pred ccC-CCCEEEEeec--------------C-CCCeEEEEECCCCeEEeee-ccCceEEEEECCCCCEEEEeecCcccccCC
Q psy13461 2 KCT-MGTHIVLAEL--------------R-DTGSLEFVDTGDFSVMNAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADT 64 (194)
Q Consensus 2 fSP-~G~~la~ag~--------------~-~dg~l~fwD~~~~~~i~~~-~h~~vt~v~WsPdGr~lat~ss~~~~~~D~ 64 (194)
+.| +|++.++... + .+|.|..+|.++++..... .-...+.|+|+|+|++|..+.+ ..+
T Consensus 133 ~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~-----~~~ 207 (322)
T 2fp8_A 133 VDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEF-----LSH 207 (322)
T ss_dssp ECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEG-----GGT
T ss_pred EecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeC-----CCC
Confidence 467 8887776431 0 1367888898765543221 1234678999999996655543 267
Q ss_pred eEEEEeecCcE-----EEeeCCCCEEEEEEeeCCCceecccc
Q psy13461 65 GYWQWSFQGKI-----IKRFNSPTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 65 ~~~IW~~~G~~-----l~~~~~~~~~~~~wrP~~~~Lls~~~ 101 (194)
.+..+++.|.. ....... -..++..|+|...++...
T Consensus 208 ~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 208 QIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp EEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEE
T ss_pred eEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecC
Confidence 88888886521 1111112 556777788776666543
No 240
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.41 E-value=0.17 Score=41.48 Aligned_cols=52 Identities=15% Similarity=0.272 Sum_probs=37.2
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEee
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGV 55 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~s 55 (194)
++|+|+++++.. .++.|..||.+...............++++|+|+++++..
T Consensus 39 ~~~~g~lyv~d~--~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~ 90 (306)
T 2p4o_A 39 SAPDGTIFVTNH--EVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGW 90 (306)
T ss_dssp ECTTSCEEEEET--TTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEE
T ss_pred ECCCCCEEEEeC--CCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEec
Confidence 689999777765 4789999998763322212234688999999999777664
No 241
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.32 E-value=0.24 Score=39.30 Aligned_cols=100 Identities=10% Similarity=0.034 Sum_probs=59.6
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCC--eEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEee
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDF--SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRF 79 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~--~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~ 79 (194)
++|+|..|..+.. .++.|..+|.+.. +.+..........++++|+|.+|..+... ...+.+..++++|......
T Consensus 86 ~d~~~~~lyv~d~-~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~---~~~~~I~~~~~dg~~~~~~ 161 (267)
T 1npe_A 86 LDHLGRTIFWTDS-QLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWN---RDNPKIETSHMDGTNRRIL 161 (267)
T ss_dssp EETTTTEEEEEET-TTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECC---SSSCEEEEEETTSCCCEEE
T ss_pred EEecCCeEEEEEC-CCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECC---CCCcEEEEEecCCCCcEEE
Confidence 5677666655553 4788999998742 22322223467899999975544333320 0135677788887654433
Q ss_pred ---CCCCEEEEEEeeCCCce-ecccchhHH
Q psy13461 80 ---NSPTFCQLRWRPRPASL-LSKEQVDKI 105 (194)
Q Consensus 80 ---~~~~~~~~~wrP~~~~L-ls~~~~~~I 105 (194)
....-..+++.|++..| ++......|
T Consensus 162 ~~~~~~~P~gia~d~~~~~lyv~d~~~~~I 191 (267)
T 1npe_A 162 AQDNLGLPNGLTFDAFSSQLCWVDAGTHRA 191 (267)
T ss_dssp ECTTCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred EECCCCCCcEEEEcCCCCEEEEEECCCCEE
Confidence 24456789999987655 444433333
No 242
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=95.26 E-value=0.0091 Score=51.03 Aligned_cols=84 Identities=10% Similarity=-0.011 Sum_probs=48.6
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeeccCceEEEEECCC----CCEEEEeecCcccccCCeEEEEee-cCcEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPT----GRYVMSGVSLWKTKADTGYWQWSF-QGKII 76 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h~~vt~v~WsPd----Gr~lat~ss~~~~~~D~~~~IW~~-~G~~l 76 (194)
++|+|..|++++ .+|.|..||..+++.+-..........+.+++ |+ |.+++. |+.+..||. +|+++
T Consensus 126 ~~p~~~~v~~~~--~dg~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-v~~~~~------dg~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 126 LSPSTSLLYLGR--TEYTITMYDTKTRELRWNATYFDYAASLPEDDVDYKMS-HFVSNG------DGLVVTVDSESGDVL 196 (369)
T ss_dssp -------EEEEE--EEEEEECCCSSSSSCCCEEEEEEECCBCCCCCTTCCCC-EEEEET------SCEEEEECTTTCCEE
T ss_pred ccccCCEEEEEe--cCCEEEEEECCCCCEEEeEecccccCccccCCccccce-EEEECC------CCEEEEEECCCCcEE
Confidence 578888888887 58999999998877654332222233444554 44 445553 888999998 69988
Q ss_pred EeeC-CCCE-EEEEEeeCCC
Q psy13461 77 KRFN-SPTF-CQLRWRPRPA 94 (194)
Q Consensus 77 ~~~~-~~~~-~~~~wrP~~~ 94 (194)
.+.. ..++ ..+.+++++-
T Consensus 197 W~~~~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 197 WIQNYASPVVAFYVWQREGL 216 (369)
T ss_dssp EEEECSSCEEEEEECTTSSC
T ss_pred EEecCCCceEEEEEecCCce
Confidence 7764 3333 3445555653
No 243
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.22 E-value=0.13 Score=42.15 Aligned_cols=90 Identities=4% Similarity=-0.037 Sum_probs=60.0
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEe-ee--------------------ccCceEEEEECC-CCCEEEEeecCcc
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMN-AA--------------------EHHQATDVEWDP-TGRYVMSGVSLWK 59 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~-~~--------------------~h~~vt~v~WsP-dGr~lat~ss~~~ 59 (194)
++|+|+++.++. .++.|..||.++..... .. .......++++| +|+++++..
T Consensus 26 ~d~~g~~l~v~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~---- 99 (322)
T 2fp8_A 26 FDSTNKGFYTSV--QDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC---- 99 (322)
T ss_dssp CCTTCSSEEEEC--TTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET----
T ss_pred EcCCCCEEEEEc--CCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC----
Confidence 678999666766 57899999987643321 10 012478899998 787666543
Q ss_pred cccCCeEEEEeecCcEEEee-------CCCCEEEEEEee-CCCceeccc
Q psy13461 60 TKADTGYWQWSFQGKIIKRF-------NSPTFCQLRWRP-RPASLLSKE 100 (194)
Q Consensus 60 ~~~D~~~~IW~~~G~~l~~~-------~~~~~~~~~wrP-~~~~Lls~~ 100 (194)
.+++..+|.++..+..+ .......+++.| +|...++..
T Consensus 100 ---~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~ 145 (322)
T 2fp8_A 100 ---YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDV 145 (322)
T ss_dssp ---TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEES
T ss_pred ---CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECC
Confidence 45688888775433222 134578899999 998877754
No 244
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.17 E-value=0.064 Score=44.68 Aligned_cols=93 Identities=12% Similarity=-0.045 Sum_probs=61.4
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee---ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA---EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIK 77 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~---~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~ 77 (194)
|+|+|++.+++|...++.|.+.|+.+++.+.+. .+...-.++++ |..|..+.- .++.+.++|. +++.+.
T Consensus 28 ~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~-----~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 28 YAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVW-----LKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp ECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEET-----TCSEEEEEETTTTEEEE
T ss_pred EeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEe-----cCCEEEEEECCCCcEEE
Confidence 789988777766212689999999999887764 23333455665 444444432 3889999998 578888
Q ss_pred eeCCC-CEEEEEEeeCCCceecccch
Q psy13461 78 RFNSP-TFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 78 ~~~~~-~~~~~~wrP~~~~Lls~~~~ 102 (194)
+.+.. . ......|+|..|..+...
T Consensus 101 ~i~~g~~-~g~glt~Dg~~l~vs~gs 125 (266)
T 2iwa_A 101 NFTHQMK-DGWGLATDGKILYGSDGT 125 (266)
T ss_dssp EEECCSS-SCCEEEECSSSEEEECSS
T ss_pred EEECCCC-CeEEEEECCCEEEEECCC
Confidence 77533 2 134466788877765433
No 245
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.15 E-value=0.22 Score=41.49 Aligned_cols=89 Identities=15% Similarity=0.148 Sum_probs=55.4
Q ss_pred ccCCCCEEEEeecCCCCeEEE-EEC--CCCeEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-CcEEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEF-VDT--GDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIK 77 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~f-wD~--~~~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~~l~ 77 (194)
++|+|++++++. +|.+.. +|- .+.+.+.......+..+.++|+|+.++.+. ++.+.+++.+ |.--.
T Consensus 170 ~~~~~~~~~~g~---~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~-------~G~~~~s~~D~G~tW~ 239 (327)
T 2xbg_A 170 RSPSGEYVAVSS---RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVN-------GGKIAFSDPDNSENWG 239 (327)
T ss_dssp ECTTSCEEEEET---TSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEET-------TTEEEEEETTEEEEEC
T ss_pred EcCCCcEEEEEC---CCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEeC-------CceEEEecCCCCCeeE
Confidence 578888887764 454433 443 244555444456789999999999887654 4455555333 44333
Q ss_pred eeC------CCCEEEEEEeeCCCceeccc
Q psy13461 78 RFN------SPTFCQLRWRPRPASLLSKE 100 (194)
Q Consensus 78 ~~~------~~~~~~~~wrP~~~~Lls~~ 100 (194)
... ...+..+.+.|.+..++.+.
T Consensus 240 ~~~~~~~~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 240 ELLSPLRRNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp CCBCTTSSCCSCEEEEEESSSSCEEEEES
T ss_pred eccCCcccCCcceEEEEecCCCEEEEEeC
Confidence 222 13588999998777666543
No 246
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.04 E-value=0.046 Score=50.78 Aligned_cols=75 Identities=16% Similarity=0.103 Sum_probs=54.1
Q ss_pred CeEEEEECCCCeEEeeecc-CceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEeeCCC---CEEEEEEeeC
Q psy13461 18 GSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKRFNSP---TFCQLRWRPR 92 (194)
Q Consensus 18 g~l~fwD~~~~~~i~~~~h-~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~~~~~---~~~~~~wrP~ 92 (194)
|.|.-||+.+++.+-+..+ ..+.....+++|..|.+++ .|+.+++||. +|+.+.++... .-.-+.|.++
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~------~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~ 530 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGT------ADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVD 530 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEEC------TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEEC------CCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeC
Confidence 7899999999988765443 3345556777888888876 4999999998 69999887521 2234566788
Q ss_pred CCceec
Q psy13461 93 PASLLS 98 (194)
Q Consensus 93 ~~~Lls 98 (194)
|..++.
T Consensus 531 G~~~v~ 536 (677)
T 1kb0_A 531 GRQYVS 536 (677)
T ss_dssp TEEEEE
T ss_pred CEEEEE
Confidence 865543
No 247
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.96 E-value=0.086 Score=48.96 Aligned_cols=64 Identities=11% Similarity=0.201 Sum_probs=46.7
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCC------eE-------Eeeec-cCceEEEEECCCCCEEEEeecCcccccCCeEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDF------SV-------MNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYW 67 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~------~~-------i~~~~-h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~ 67 (194)
.||||+|++.+|. .+.++-++|+... ++ ....+ .-+-.+.+|+|+|.-..|-- .|+.+.
T Consensus 330 vsPDGkyi~v~GK-LsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlf------idSqvv 402 (638)
T 3sbq_A 330 TSSDGKYFIAAGK-LSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLF------IDSQVV 402 (638)
T ss_dssp ECTTSCEEEEECT-TSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEET------TTTEEE
T ss_pred eCCCCCEEEEcCC-CCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeee------ecceEE
Confidence 5899999999987 6899999998732 11 22222 34678899999994333333 599999
Q ss_pred EEeec
Q psy13461 68 QWSFQ 72 (194)
Q Consensus 68 IW~~~ 72 (194)
-|++.
T Consensus 403 kWni~ 407 (638)
T 3sbq_A 403 KWNME 407 (638)
T ss_dssp EEEHH
T ss_pred EEecc
Confidence 99984
No 248
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.83 E-value=0.062 Score=50.02 Aligned_cols=76 Identities=12% Similarity=0.087 Sum_probs=54.1
Q ss_pred CCeEEEEECCCCeEEeeec-cCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEeeCCC---CEEEEEEee
Q psy13461 17 TGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKRFNSP---TFCQLRWRP 91 (194)
Q Consensus 17 dg~l~fwD~~~~~~i~~~~-h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~~~~~---~~~~~~wrP 91 (194)
+|.|.-||+.+++.+-+.. +..+....+++.|..|.+++ .|+.++.||. +|++|.+.... .-.-+.|.+
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt------~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~ 527 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGS------ADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSV 527 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEEC------TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEEC------CCCcEEEEECCCCccceeeeCCCCcccCceEEEE
Confidence 3789999999998876543 33344446777888888886 4999999998 69999876411 123467788
Q ss_pred CCCceec
Q psy13461 92 RPASLLS 98 (194)
Q Consensus 92 ~~~~Lls 98 (194)
+|...+.
T Consensus 528 ~G~qyv~ 534 (689)
T 1yiq_A 528 DGEQYVT 534 (689)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 8875443
No 249
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.74 E-value=0.21 Score=42.39 Aligned_cols=96 Identities=7% Similarity=0.080 Sum_probs=55.9
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee-----ccCceEEEEECCC----CCEEEEeecCcccccCCeEEEEeec
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA-----EHHQATDVEWDPT----GRYVMSGVSLWKTKADTGYWQWSFQ 72 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~-----~h~~vt~v~WsPd----Gr~lat~ss~~~~~~D~~~~IW~~~ 72 (194)
|+|+|+++|+- ..|.|..++..+.+.+... .......|+|+|+ |+.+++.+.. .....+.+..++..
T Consensus 38 ~~pdG~l~V~e---~~g~I~~i~~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~-~~~~~~~v~r~~~~ 113 (352)
T 2ism_A 38 FLPDGGMLIAE---RPGRIRLFREGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVA-EGGLRNQVVRLRHL 113 (352)
T ss_dssp ECTTSCEEEEE---TTTEEEEEETTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEC-TTSSEEEEEEEEEC
T ss_pred EcCCCeEEEEe---CCCeEEEEECCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecC-CCCCccEEEEEEeC
Confidence 78999977765 3699999982222222211 1246899999999 4444444320 00001456667766
Q ss_pred Cc------EEE-eeC-----CCCEEEEEEeeCCCceecccc
Q psy13461 73 GK------IIK-RFN-----SPTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 73 G~------~l~-~~~-----~~~~~~~~wrP~~~~Lls~~~ 101 (194)
+. .+. ..+ ...-..++|.|+|...+|.+.
T Consensus 114 ~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~ 154 (352)
T 2ism_A 114 GERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGE 154 (352)
T ss_dssp SSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCC
T ss_pred CCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECC
Confidence 42 122 233 123468999999988887654
No 250
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=94.65 E-value=0.17 Score=44.29 Aligned_cols=65 Identities=11% Similarity=0.096 Sum_probs=44.0
Q ss_pred ccC-CCCEEEEeecCCCCeEEEEECCCCeE--Eeee-ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecC
Q psy13461 2 KCT-MGTHIVLAELRDTGSLEFVDTGDFSV--MNAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQG 73 (194)
Q Consensus 2 fSP-~G~~la~ag~~~dg~l~fwD~~~~~~--i~~~-~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G 73 (194)
++| +|.+.++-. .++.|..+|.++... +... .....+.|+|+|+|++|..+.. ..+.|..++.+|
T Consensus 233 vdp~~g~lyv~d~--~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~-----~~~~I~~~~~d~ 301 (430)
T 3tc9_A 233 THPINGELYFNSW--NAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV-----NQHYILRSDYDW 301 (430)
T ss_dssp ECTTTCCEEEEET--TTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET-----TTTEEEEEEEET
T ss_pred EeCCCCEEEEEEC--CCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC-----CCCEEEEEeCCc
Confidence 578 666555543 478999999887554 2222 2245789999999996555543 367788888775
No 251
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.51 E-value=0.14 Score=43.76 Aligned_cols=97 Identities=9% Similarity=0.092 Sum_probs=56.5
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee-----ccCceEEEEECCC----CCEEEEeec-CcccccCCeEEEEee
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA-----EHHQATDVEWDPT----GRYVMSGVS-LWKTKADTGYWQWSF 71 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~-----~h~~vt~v~WsPd----Gr~lat~ss-~~~~~~D~~~~IW~~ 71 (194)
|.|+|+++|+- .+|.|..+|.+..+.+... .......|+++|+ |+.+++.+. .......+.|..|+.
T Consensus 36 ~~pdG~l~V~e---~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~ 112 (354)
T 3a9g_A 36 PLGGGRYLVTE---RPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRL 112 (354)
T ss_dssp EEETTEEEEEE---TTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEE
T ss_pred EcCCCeEEEEe---CCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEE
Confidence 78999977765 3689998874432222211 1246899999998 555555441 000000145666766
Q ss_pred cCc---------EEEeeC---CCCEEEEEEeeCCCceecccc
Q psy13461 72 QGK---------IIKRFN---SPTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 72 ~G~---------~l~~~~---~~~~~~~~wrP~~~~Lls~~~ 101 (194)
.+. ++...+ ...-..++|.|+|...+|.+.
T Consensus 113 ~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~ 154 (354)
T 3a9g_A 113 DGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGD 154 (354)
T ss_dssp CSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCC
T ss_pred CCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECC
Confidence 543 122222 123467999999998887654
No 252
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.34 E-value=0.19 Score=45.09 Aligned_cols=88 Identities=9% Similarity=0.087 Sum_probs=60.0
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCC-------------e--EEeee-----ccCceEEEEECCCCC---EEEEeecCc
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDF-------------S--VMNAA-----EHHQATDVEWDPTGR---YVMSGVSLW 58 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~-------------~--~i~~~-----~h~~vt~v~WsPdGr---~lat~ss~~ 58 (194)
.||+|++||+.| +.+|.+-.+-.. + ....+ ....|..+-|+|-|- .|++-.+
T Consensus 73 lSpsG~lLAl~g---~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLts-- 147 (452)
T 3pbp_A 73 SSTSGDLLCLFN---DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKE-- 147 (452)
T ss_dssp ECTTSSEEEEEC---SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEET--
T ss_pred ECCCCCEEEEec---CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEec--
Confidence 599999999998 678888876511 1 11111 134699999999654 5666664
Q ss_pred ccccCCeEEEEeecC-c--E--EEee----C----CCCEEEEEEeeCCCceec
Q psy13461 59 KTKADTGYWQWSFQG-K--I--IKRF----N----SPTFCQLRWRPRPASLLS 98 (194)
Q Consensus 59 ~~~~D~~~~IW~~~G-~--~--l~~~----~----~~~~~~~~wrP~~~~Lls 98 (194)
|+.+++||+.- . . |.+. . ...+.+++|.++|-+|-.
T Consensus 148 ----D~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYv 196 (452)
T 3pbp_A 148 ----DDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYC 196 (452)
T ss_dssp ----TSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEE
T ss_pred ----CCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEE
Confidence 99999999953 1 1 2111 1 267889999998877655
No 253
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.01 E-value=0.061 Score=49.96 Aligned_cols=100 Identities=12% Similarity=0.097 Sum_probs=64.7
Q ss_pred CC---CEEEEeecCCCCeEEEEECCCCeEEeeeccCc---e----------------------------------EEEEE
Q psy13461 5 MG---THIVLAELRDTGSLEFVDTGDFSVMNAAEHHQ---A----------------------------------TDVEW 44 (194)
Q Consensus 5 ~G---~~la~ag~~~dg~l~fwD~~~~~~i~~~~h~~---v----------------------------------t~v~W 44 (194)
+| ..|+.++ .+|.|.++|..+++.+....... . ..+++
T Consensus 323 dG~~~~~l~~~~--~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~ 400 (677)
T 1kb0_A 323 AGKPRKVILHAP--KNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSF 400 (677)
T ss_dssp TTEEEEEEEECC--TTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEE
T ss_pred CCcEeeEEEEEC--CCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceE
Confidence 67 5777777 69999999999988875432110 1 14688
Q ss_pred CCCCCEEEEeecCcc-------------------------------------cccCCeEEEEee-cCcEEEeeC-CCCEE
Q psy13461 45 DPTGRYVMSGVSLWK-------------------------------------TKADTGYWQWSF-QGKIIKRFN-SPTFC 85 (194)
Q Consensus 45 sPdGr~lat~ss~~~-------------------------------------~~~D~~~~IW~~-~G~~l~~~~-~~~~~ 85 (194)
||++..|.+.+...- ....+.+..||. +|+.+.+.. ...++
T Consensus 401 dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~ 480 (677)
T 1kb0_A 401 NPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWN 480 (677)
T ss_dssp ETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCC
T ss_pred cCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCc
Confidence 999887776543100 001267888998 588887765 33444
Q ss_pred EEEEeeCCCceecccchhHHH
Q psy13461 86 QLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 86 ~~~wrP~~~~Lls~~~~~~Ik 106 (194)
.-...+.+..++.++.++.++
T Consensus 481 ~g~~~~~g~~v~~g~~dg~l~ 501 (677)
T 1kb0_A 481 GGTLTTAGNVVFQGTADGRLV 501 (677)
T ss_dssp CCEEEETTTEEEEECTTSEEE
T ss_pred CcceEeCCCEEEEECCCCcEE
Confidence 555667777777766665544
No 254
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=93.99 E-value=0.21 Score=43.14 Aligned_cols=95 Identities=11% Similarity=0.115 Sum_probs=62.8
Q ss_pred cCCCCEEEEeecC-----------CCCeEEEEECC---CCeEEeee---------------ccCceEEEEECCCCCEEEE
Q psy13461 3 CTMGTHIVLAELR-----------DTGSLEFVDTG---DFSVMNAA---------------EHHQATDVEWDPTGRYVMS 53 (194)
Q Consensus 3 SP~G~~la~ag~~-----------~dg~l~fwD~~---~~~~i~~~---------------~h~~vt~v~WsPdGr~lat 53 (194)
-|+|+++|++..+ .+..|.-+|+. +++.+... ....+++++-+|+|+..+|
T Consensus 74 D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt 153 (334)
T 2p9w_A 74 DNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVA 153 (334)
T ss_dssp SSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEE
T ss_pred CCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEe
Confidence 4788888864310 14668889988 55543221 1235999999999999998
Q ss_pred eecCcccccC-CeEEEEeecCcEEEee--C------CCCEEEEEEeeCCCceecccchh
Q psy13461 54 GVSLWKTKAD-TGYWQWSFQGKIIKRF--N------SPTFCQLRWRPRPASLLSKEQVD 103 (194)
Q Consensus 54 ~ss~~~~~~D-~~~~IW~~~G~~l~~~--~------~~~~~~~~wrP~~~~Lls~~~~~ 103 (194)
++- - +.|...+-+|+.+..+ . ...+..+++.|++..|+.....+
T Consensus 154 ~s~------~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g 206 (334)
T 2p9w_A 154 FAL------GMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPR 206 (334)
T ss_dssp EEE------SSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSS
T ss_pred CCC------CCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCC
Confidence 874 3 4555555567744322 1 22377999999999888776543
No 255
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=93.89 E-value=0.22 Score=44.69 Aligned_cols=83 Identities=11% Similarity=0.179 Sum_probs=53.0
Q ss_pred CCeEEEEECC---CCeEEeeec---cCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-Cc------------EEE
Q psy13461 17 TGSLEFVDTG---DFSVMNAAE---HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GK------------IIK 77 (194)
Q Consensus 17 dg~l~fwD~~---~~~~i~~~~---h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~------------~l~ 77 (194)
++.|+..++. .++.+.... ...+..+.-||+|+|||..+ +.++.|-.+- |. .++
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-------~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ 112 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-------DNEIFVMEVPWGYSNVEDVSIQDAFQIF 112 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-------SSEEEEEECCTTCSCCCCHHHHHTTEEE
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-------CCeEEEEEecCccccCccccccccccee
Confidence 5667766765 255555532 23688899999999999988 4455553331 11 111
Q ss_pred ee--------CCCCEEEEEEeeCC---CceecccchhHHH
Q psy13461 78 RF--------NSPTFCQLRWRPRP---ASLLSKEQVDKIK 106 (194)
Q Consensus 78 ~~--------~~~~~~~~~wrP~~---~~Lls~~~~~~Ik 106 (194)
.. +..+|.++.|||-+ ..|+.=-.+.+||
T Consensus 113 ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir 152 (452)
T 3pbp_A 113 HYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTIT 152 (452)
T ss_dssp EEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEE
T ss_pred EEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEE
Confidence 11 24679999999976 4576666776666
No 256
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=93.70 E-value=0.21 Score=43.21 Aligned_cols=92 Identities=9% Similarity=0.080 Sum_probs=55.0
Q ss_pred ccCCCCEEEEeecC---------------CCCeEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeE
Q psy13461 2 KCTMGTHIVLAELR---------------DTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGY 66 (194)
Q Consensus 2 fSP~G~~la~ag~~---------------~dg~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~ 66 (194)
+.|+|+|.|+.... ..|.|..+|....+.+... -...+.|+|||||++|..+.+ ..+.+
T Consensus 172 v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~~-l~~pNGia~spDg~~lYvadt-----~~~~I 245 (355)
T 3sre_A 172 AVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEG-FDFANGINISPDGKYVYIAEL-----LAHKI 245 (355)
T ss_dssp EEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEEEE-ESSEEEEEECTTSSEEEEEEG-----GGTEE
T ss_pred EeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEeecC-CcccCcceECCCCCEEEEEeC-----CCCeE
Confidence 35788888775421 2366777776554444332 346799999999998888776 36778
Q ss_pred EEEeec--CcEEEe--eC-CCCEEEEEEee-CCCceecc
Q psy13461 67 WQWSFQ--GKIIKR--FN-SPTFCQLRWRP-RPASLLSK 99 (194)
Q Consensus 67 ~IW~~~--G~~l~~--~~-~~~~~~~~wrP-~~~~Lls~ 99 (194)
..|+++ |.+-.. +. ...--.++.-+ +|...+++
T Consensus 246 ~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 246 HVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp EEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred EEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEe
Confidence 888884 543221 11 12233455555 35554433
No 257
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=93.61 E-value=0.76 Score=37.81 Aligned_cols=94 Identities=11% Similarity=0.145 Sum_probs=63.9
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeec---cCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec--Cc--
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAE---HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ--GK-- 74 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~---h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~--G~-- 74 (194)
|+|++..|.+++- .++.|.-.|++ ++.+.+.. ....-.|++.++|+|+++.-. ++.+.++++. |.
T Consensus 34 ~~~~~~~L~aV~d-~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~------~~~l~~~~v~~~~~i~ 105 (255)
T 3qqz_A 34 WSAQSNTLFSTIN-KPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDER------DYAIYVISLTPNSEVK 105 (255)
T ss_dssp EETTTTEEEEEEE-TTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETT------TTEEEEEEECTTCCEE
T ss_pred EeCCCCEEEEEEC-CCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECC------CCcEEEEEcCCCCeee
Confidence 6788765554432 47888888988 67666532 246788999999998776543 6778888763 43
Q ss_pred EEEee--C------CCCEEEEEEeeCCCceecccchh
Q psy13461 75 IIKRF--N------SPTFCQLRWRPRPASLLSKEQVD 103 (194)
Q Consensus 75 ~l~~~--~------~~~~~~~~wrP~~~~Lls~~~~~ 103 (194)
.+... . ...|-.++|.|.+..|..+.+..
T Consensus 106 ~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~ 142 (255)
T 3qqz_A 106 ILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN 142 (255)
T ss_dssp EEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS
T ss_pred eeeeeccccccccccCCcceEEEeCCCCEEEEEECcC
Confidence 12222 1 33478999999998888877654
No 258
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=93.04 E-value=0.55 Score=40.56 Aligned_cols=96 Identities=7% Similarity=0.026 Sum_probs=56.4
Q ss_pred CCC-EEEEeecC-CCCeEEEEECCC--C--eEEeeecc---CceEEEEECCCCCEEEEeecCcc---cc------cCCeE
Q psy13461 5 MGT-HIVLAELR-DTGSLEFVDTGD--F--SVMNAAEH---HQATDVEWDPTGRYVMSGVSLWK---TK------ADTGY 66 (194)
Q Consensus 5 ~G~-~la~ag~~-~dg~l~fwD~~~--~--~~i~~~~h---~~vt~v~WsPdGr~lat~ss~~~---~~------~D~~~ 66 (194)
+|+ +|.++.-+ .++++++|+++. . ..+.+.++ ...+++..+|+|++.+|...... .. ....=
T Consensus 124 dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g 203 (355)
T 3sre_A 124 DNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWS 203 (355)
T ss_dssp TCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCE
T ss_pred CCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCcc
Confidence 454 45555432 367899988653 2 23333333 46899999999999988653211 00 11222
Q ss_pred EEEeecCcEEEee--CCCCEEEEEEeeCCCceeccc
Q psy13461 67 WQWSFQGKIIKRF--NSPTFCQLRWRPRPASLLSKE 100 (194)
Q Consensus 67 ~IW~~~G~~l~~~--~~~~~~~~~wrP~~~~Lls~~ 100 (194)
.||-++...+... ....-+.++|+|++.+|.-++
T Consensus 204 ~vyr~d~~~~~~~~~~l~~pNGia~spDg~~lYvad 239 (355)
T 3sre_A 204 FVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAE 239 (355)
T ss_dssp EEEEECTTCCEEEEEEESSEEEEEECTTSSEEEEEE
T ss_pred EEEEEECCeEEEeecCCcccCcceECCCCCEEEEEe
Confidence 4555543222222 245678999999998776554
No 259
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=93.03 E-value=0.33 Score=42.42 Aligned_cols=96 Identities=9% Similarity=0.170 Sum_probs=55.6
Q ss_pred ccCCCCEEEEeecC---CCCeEEEEECCC-Ce---EEeeeccCceEEEEECC-CCCEEEEeecCcccccCCeEEEEeecC
Q psy13461 2 KCTMGTHIVLAELR---DTGSLEFVDTGD-FS---VMNAAEHHQATDVEWDP-TGRYVMSGVSLWKTKADTGYWQWSFQG 73 (194)
Q Consensus 2 fSP~G~~la~ag~~---~dg~l~fwD~~~-~~---~i~~~~h~~vt~v~WsP-dGr~lat~ss~~~~~~D~~~~IW~~~G 73 (194)
|+|+|++|.++..+ ....+...+.+. .. .+. .......++++| +|+.+++-.. .+.+..++..|
T Consensus 186 ~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~--~~~~p~giavdp~~g~lyv~d~~------~~~V~~~~~~~ 257 (430)
T 3tc9_A 186 WTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELT--KGQNCNGAETHPINGELYFNSWN------AGQVFRYDFTT 257 (430)
T ss_dssp ECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE--ECSSCCCEEECTTTCCEEEEETT------TTEEEEEETTT
T ss_pred EeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec--cCCCceEEEEeCCCCEEEEEECC------CCEEEEEECCC
Confidence 68999966666531 011333344332 11 222 223467889999 7776655442 56788888876
Q ss_pred cEEEe---eC-CCCEEEEEEeeCCC-ceecccchhHH
Q psy13461 74 KIIKR---FN-SPTFCQLRWRPRPA-SLLSKEQVDKI 105 (194)
Q Consensus 74 ~~l~~---~~-~~~~~~~~wrP~~~-~Lls~~~~~~I 105 (194)
..+.. .. ...-..++|+|++. .+++......|
T Consensus 258 ~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 258 QETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp TEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred CcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 65422 22 23456899999999 55554444444
No 260
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=92.50 E-value=0.32 Score=40.54 Aligned_cols=95 Identities=11% Similarity=0.022 Sum_probs=57.3
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeec---cCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAE---HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIK 77 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~---h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~ 77 (194)
|+ +|.+.+++|...++.|..+|+.+++.+.+.. ....-.++.+.+--|++++- ++.+.++|. +++++.
T Consensus 50 ~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~-------~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 50 YR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK-------NGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-------SSEEEEEETTTCCEEE
T ss_pred EE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee-------CCEEEEEECccCcEEE
Confidence 56 6777788873112389999999998877643 22223344443333334332 788999998 588888
Q ss_pred eeCCCCEEEEEEeeCCCceecccchhHH
Q psy13461 78 RFNSPTFCQLRWRPRPASLLSKEQVDKI 105 (194)
Q Consensus 78 ~~~~~~~~~~~wrP~~~~Lls~~~~~~I 105 (194)
+++... ......|++..|.......+|
T Consensus 122 ti~~~~-eG~glt~dg~~L~~SdGs~~i 148 (262)
T 3nol_A 122 SFNYDG-EGWGLTHNDQYLIMSDGTPVL 148 (262)
T ss_dssp EEECSS-CCCCEEECSSCEEECCSSSEE
T ss_pred EEECCC-CceEEecCCCEEEEECCCCeE
Confidence 876332 223444677766555433333
No 261
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=91.98 E-value=0.99 Score=38.83 Aligned_cols=95 Identities=9% Similarity=0.045 Sum_probs=58.4
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeE--Eeee------ccCceEEEEECCC----CCEEEEeecCcccccCCeEEEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSV--MNAA------EHHQATDVEWDPT----GRYVMSGVSLWKTKADTGYWQW 69 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~--i~~~------~h~~vt~v~WsPd----Gr~lat~ss~~~~~~D~~~~IW 69 (194)
|.|+|+++|+-- ..|.|..++.++++. +... .......|+++|+ |.+.++-+.. .++.+.-|
T Consensus 39 ~~pdG~llVter--~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~----~~~~v~R~ 112 (347)
T 3das_A 39 PLPGGDLLVSSR--DEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA----SDNRIVRM 112 (347)
T ss_dssp ECTTSCEEEEET--TTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS----SSEEEEEE
T ss_pred EcCCCcEEEEEe--cCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC----CCCEEEEE
Confidence 789999887763 379999998665432 2211 1246899999995 6555654421 13444445
Q ss_pred eecC-----------cEEE-eeC---CCCEEEEEEeeCCCceecccch
Q psy13461 70 SFQG-----------KIIK-RFN---SPTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 70 ~~~G-----------~~l~-~~~---~~~~~~~~wrP~~~~Lls~~~~ 102 (194)
.+.+ +.|. .++ ...-..+.|.|+|...+|.+.-
T Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~ 160 (347)
T 3das_A 113 LYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGES 160 (347)
T ss_dssp EBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCT
T ss_pred EeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCC
Confidence 5544 1122 222 2234579999999988886543
No 262
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=91.64 E-value=1 Score=37.31 Aligned_cols=92 Identities=11% Similarity=0.114 Sum_probs=56.9
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeE---Eeee---ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-Cc
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSV---MNAA---EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GK 74 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~---i~~~---~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~ 74 (194)
++|+|++++++. +|.+.+++.+.++. +... ....+.+|.++|+|+.+|++. ++++ .++.+ |+
T Consensus 212 ~~~~g~~~~~~~---~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-------~g~i-~~S~DgG~ 280 (327)
T 2xbg_A 212 FTPDGRLWMIVN---GGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-------AGAL-LCSQDGGQ 280 (327)
T ss_dssp ECTTSCEEEEET---TTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-------TTCE-EEESSTTS
T ss_pred ECCCCCEEEEeC---CceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-------CCeE-EEeCCCCc
Confidence 468888776653 78887775453433 2211 124689999999999888776 4444 45555 43
Q ss_pred EEEeeC-----CCCEEEEEEeeCCCceecccchhHH
Q psy13461 75 IIKRFN-----SPTFCQLRWRPRPASLLSKEQVDKI 105 (194)
Q Consensus 75 ~l~~~~-----~~~~~~~~wrP~~~~Lls~~~~~~I 105 (194)
--.... ...++.+.|.+++. ++..+..+.|
T Consensus 281 tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i 315 (327)
T 2xbg_A 281 TWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGIL 315 (327)
T ss_dssp SCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEE
T ss_pred ccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceE
Confidence 222221 35789999987555 5555556554
No 263
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=91.59 E-value=1.1 Score=40.80 Aligned_cols=94 Identities=7% Similarity=-0.097 Sum_probs=60.9
Q ss_pred ccC-CCCEEEEeecCCC---------CeEEEEECCCCe--E---EeeeccCceEEEEECCCCCEEEEeecCcccccCCeE
Q psy13461 2 KCT-MGTHIVLAELRDT---------GSLEFVDTGDFS--V---MNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGY 66 (194)
Q Consensus 2 fSP-~G~~la~ag~~~d---------g~l~fwD~~~~~--~---i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~ 66 (194)
+.| +|+.++.||...+ ..+.+||..+.+ . +.......+..+++.++|+.++.|+.. ++.+
T Consensus 193 v~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~-----~~~v 267 (656)
T 1k3i_A 193 IEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGND-----AKKT 267 (656)
T ss_dssp EETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSS-----TTCE
T ss_pred EEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCC-----CCce
Confidence 356 8899999884311 168899977543 2 222122346678899999999999852 5579
Q ss_pred EEEeecCcEEEee---CCCCE-EEEEEeeCCCceeccc
Q psy13461 67 WQWSFQGKIIKRF---NSPTF-CQLRWRPRPASLLSKE 100 (194)
Q Consensus 67 ~IW~~~G~~l~~~---~~~~~-~~~~wrP~~~~Lls~~ 100 (194)
.+||.....-... +..+. ...+.-|++..++.++
T Consensus 268 ~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG 305 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGG 305 (656)
T ss_dssp EEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECC
T ss_pred EEecCcCCceeECCCCCccccccceEEecCCeEEEEeC
Confidence 9999864433332 23333 3455667898888887
No 264
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=91.34 E-value=1.5 Score=37.74 Aligned_cols=99 Identities=12% Similarity=0.064 Sum_probs=65.1
Q ss_pred ccC-CCCEEEEeecCCCCeEEEEECCCCeEEe-eecc--------CceEEEEE---CCCCCEEEEeec--Cc-----ccc
Q psy13461 2 KCT-MGTHIVLAELRDTGSLEFVDTGDFSVMN-AAEH--------HQATDVEW---DPTGRYVMSGVS--LW-----KTK 61 (194)
Q Consensus 2 fSP-~G~~la~ag~~~dg~l~fwD~~~~~~i~-~~~h--------~~vt~v~W---sPdGr~lat~ss--~~-----~~~ 61 (194)
|.+ +|+++++. + .+|+|..||.+.+.... ...+ ..++.|.| +|+||+++++.. .+ ...
T Consensus 20 wd~~~g~~~vs~-l-~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~ 97 (334)
T 2p9w_A 20 YDRTRQVFYQSN-L-YKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSH 97 (334)
T ss_dssp EETTTTEEEEEE-T-TTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSS
T ss_pred CcCCCCEEEEEe-c-cCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccC
Confidence 444 45555554 4 58999999987543222 2221 14689999 799999986431 11 112
Q ss_pred cCCeEEEEeec----CcEEEeeCC---------------CCEEEEEEeeCCCceecccch
Q psy13461 62 ADTGYWQWSFQ----GKIIKRFNS---------------PTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 62 ~D~~~~IW~~~----G~~l~~~~~---------------~~~~~~~wrP~~~~Lls~~~~ 102 (194)
.++.+..+|+. |+.+..... ..+..++--|+|..-++++.-
T Consensus 98 g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~ 157 (334)
T 2p9w_A 98 GASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG 157 (334)
T ss_dssp SCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES
T ss_pred CCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC
Confidence 37788899988 777654431 147899999999998887644
No 265
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=91.33 E-value=0.61 Score=37.35 Aligned_cols=92 Identities=13% Similarity=0.018 Sum_probs=53.9
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEee
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRF 79 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~ 79 (194)
++++|+..+. + .++.|..+|.+. ..+... ....++.+..+++|+..+ ++. ++++..+|.+|+.+...
T Consensus 222 ~~~~g~l~v~-t--~~~gl~~~~~~g-~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~------~ggl~~~d~~g~~~~~~ 290 (330)
T 3hxj_A 222 ISEDGTIYVT-S--LDGHLYAINPDG-TEKWRFKTGKRIESSPVIGNTDTIYF-GSY------DGHLYAINPDGTEKWNF 290 (330)
T ss_dssp ECTTSCEEEE-E--TTTEEEEECTTS-CEEEEEECSSCCCSCCEECTTSCEEE-ECT------TCEEEEECTTSCEEEEE
T ss_pred ECCCCeEEEE-c--CCCeEEEECCCC-CEeEEeeCCCCccccceEcCCCeEEE-ecC------CCCEEEECCCCcEEEEE
Confidence 3567765554 3 356777777543 333221 223345567788887554 442 67899999888887765
Q ss_pred C--CCCEEEEEEeeCCCceecccchhHH
Q psy13461 80 N--SPTFCQLRWRPRPASLLSKEQVDKI 105 (194)
Q Consensus 80 ~--~~~~~~~~wrP~~~~Lls~~~~~~I 105 (194)
. ...+.++...+++...+ ++..+.+
T Consensus 291 ~~~~~~~~~~~~d~~g~l~~-gt~~G~~ 317 (330)
T 3hxj_A 291 ETGSWIIATPVIDENGTIYF-GTRNGKF 317 (330)
T ss_dssp ECSSCCCSCCEECTTCCEEE-ECTTSCE
T ss_pred EcCCccccceEEcCCCEEEE-EcCCCeE
Confidence 4 34455566656666444 4444444
No 266
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=91.17 E-value=1.7 Score=38.40 Aligned_cols=99 Identities=11% Similarity=0.035 Sum_probs=55.7
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeE--Eeeec--------cCceEEEEECC----CCCEEEEeecCccccc-----
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSV--MNAAE--------HHQATDVEWDP----TGRYVMSGVSLWKTKA----- 62 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~--i~~~~--------h~~vt~v~WsP----dGr~lat~ss~~~~~~----- 62 (194)
|.|+|+++|+-. ..+.|..++..+++. +.... ...+..|+|+| +|.+.++.+.......
T Consensus 34 ~~pdG~l~V~e~--~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~ 111 (454)
T 1cru_A 34 WGPDNQIWLTER--ATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELP 111 (454)
T ss_dssp ECTTSCEEEEET--TTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSC
T ss_pred EcCCCcEEEEEc--CCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccccc
Confidence 689999888764 234688887654332 22211 24577999999 4555555442000000
Q ss_pred -CCeEEEEeecC--------cEEEe-eC---CCCEEEEEEeeCCCceecccch
Q psy13461 63 -DTGYWQWSFQG--------KIIKR-FN---SPTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 63 -D~~~~IW~~~G--------~~l~~-~~---~~~~~~~~wrP~~~~Lls~~~~ 102 (194)
.+.|.-|++++ +.|.. ++ ...-..++|.|+|...++.+.-
T Consensus 112 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~ 164 (454)
T 1cru_A 112 NQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQ 164 (454)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCT
T ss_pred cccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCC
Confidence 12344444432 12222 32 2447899999999988886653
No 267
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=91.05 E-value=0.77 Score=40.17 Aligned_cols=64 Identities=9% Similarity=0.126 Sum_probs=40.8
Q ss_pred ccC-CCCEEEEeecCCCCeEEEEECCCCeE---Eee-eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec
Q psy13461 2 KCT-MGTHIVLAELRDTGSLEFVDTGDFSV---MNA-AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ 72 (194)
Q Consensus 2 fSP-~G~~la~ag~~~dg~l~fwD~~~~~~---i~~-~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~ 72 (194)
++| +|.+.++-. .++.|..+|.+++.. +.. ........|+|||+|++|..+.. ..+.|..++++
T Consensus 235 vd~~~G~lyv~d~--~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~-----~~~~I~~~~~d 303 (433)
T 4hw6_A 235 VHPQNGKIYYTRY--HHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN-----GKHCIYRVDYN 303 (433)
T ss_dssp ECTTTCCEEECBT--TCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET-----TTTEEEEEEBC
T ss_pred EeCCCCeEEEEEC--CCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC-----CCCEEEEEeCC
Confidence 567 666555544 478899999876544 221 12233457999999996555543 35677777765
No 268
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=90.93 E-value=0.53 Score=42.59 Aligned_cols=66 Identities=12% Similarity=0.193 Sum_probs=41.7
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECC-------CCeE--------------Eeee-ccCceEEEEECCCCCEEEEeecCcc
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTG-------DFSV--------------MNAA-EHHQATDVEWDPTGRYVMSGVSLWK 59 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~-------~~~~--------------i~~~-~h~~vt~v~WsPdGr~lat~ss~~~ 59 (194)
++|++.+|..+.. .++.|..+|.+ ++.. +.+. .......|+|+|+|++|..+.+
T Consensus 254 vdp~~g~LYvtd~-~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~--- 329 (496)
T 3kya_A 254 IHPINGELYFNSY-EKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVI--- 329 (496)
T ss_dssp ECTTTCCEEEEET-TTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEET---
T ss_pred EcCCCCeEEEEEC-CCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeC---
Confidence 5786666655555 47889999976 3332 2222 2345689999999995444443
Q ss_pred cccCCeEEEEeecC
Q psy13461 60 TKADTGYWQWSFQG 73 (194)
Q Consensus 60 ~~~D~~~~IW~~~G 73 (194)
..+.|+.++++|
T Consensus 330 --~~h~I~kid~dg 341 (496)
T 3kya_A 330 --NNHYFMRSDYDE 341 (496)
T ss_dssp --TTTEEEEEEEET
T ss_pred --CCCEEEEEecCC
Confidence 255677766655
No 269
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=90.40 E-value=0.78 Score=36.70 Aligned_cols=82 Identities=11% Similarity=0.030 Sum_probs=51.0
Q ss_pred EEEEeecCCCCeEEEEECCCCeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEeeC--CCC
Q psy13461 8 HIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRFN--SPT 83 (194)
Q Consensus 8 ~la~ag~~~dg~l~fwD~~~~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~~--~~~ 83 (194)
.|.+++ .+|.|..+|.+ ++.+... ....+.++..+++|+.++ ++. ++++..+|.+|+.+.... ...
T Consensus 109 ~l~v~t--~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~v-gt~------~~~l~~~d~~g~~~~~~~~~~~~ 178 (330)
T 3hxj_A 109 ILYVTS--MDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYV-GSN------DNYLYAINPDGTEKWRFKTNDAI 178 (330)
T ss_dssp EEEEEC--TTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEE-ECT------TSEEEEECTTSCEEEEEECSSCC
T ss_pred EEEEEe--cCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEE-EcC------CCEEEEECCCCCEeEEEecCCCc
Confidence 444555 47889999987 5554332 234467778888998665 332 678888888877765543 334
Q ss_pred EEEEEEeeCCCceecc
Q psy13461 84 FCQLRWRPRPASLLSK 99 (194)
Q Consensus 84 ~~~~~wrP~~~~Lls~ 99 (194)
+..+...+++...++.
T Consensus 179 ~~~~~~d~~g~l~v~t 194 (330)
T 3hxj_A 179 TSAASIGKDGTIYFGS 194 (330)
T ss_dssp CSCCEECTTCCEEEES
T ss_pred eeeeEEcCCCEEEEEe
Confidence 4555555565544443
No 270
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=90.08 E-value=0.97 Score=38.24 Aligned_cols=96 Identities=11% Similarity=0.060 Sum_probs=53.0
Q ss_pred ccCCCC-EEEEeecCCCCeEEEEECCCCe--EEeee------ccCceEEEEECCC----CCEEEEeecCcccc--cCCeE
Q psy13461 2 KCTMGT-HIVLAELRDTGSLEFVDTGDFS--VMNAA------EHHQATDVEWDPT----GRYVMSGVSLWKTK--ADTGY 66 (194)
Q Consensus 2 fSP~G~-~la~ag~~~dg~l~fwD~~~~~--~i~~~------~h~~vt~v~WsPd----Gr~lat~ss~~~~~--~D~~~ 66 (194)
|.|+|+ ++|+- ..|.|..++.+... .+... .......|+|+|+ |+..++.+.. ... ..+.|
T Consensus 25 ~~pdG~~l~V~e---~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~-~~~g~~~~~v 100 (353)
T 2g8s_A 25 FLPDNHGMLITL---RGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEV-GDDGKAGTAV 100 (353)
T ss_dssp ECSTTCCEEEEE---TTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEE-CSSSCEEEEE
T ss_pred EcCCCCEEEEEe---CCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCC-CCCCCceeEE
Confidence 789999 66554 47899999865321 11111 1235789999995 5555554321 000 01234
Q ss_pred EEEeecCc--------EE-EeeCC-----CCEEEEEEeeCCCceecccc
Q psy13461 67 WQWSFQGK--------II-KRFNS-----PTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 67 ~IW~~~G~--------~l-~~~~~-----~~~~~~~wrP~~~~Lls~~~ 101 (194)
.-|++++. .+ ...+. ..-..++|.|+|...++.+.
T Consensus 101 ~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 101 GYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp EEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred EEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 44555321 11 11221 12457999999987777644
No 271
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=90.08 E-value=4.4 Score=33.25 Aligned_cols=78 Identities=12% Similarity=0.029 Sum_probs=47.9
Q ss_pred CCCeEEEEECCCCe--EEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEee---CCCCEEEEEEe
Q psy13461 16 DTGSLEFVDTGDFS--VMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRF---NSPTFCQLRWR 90 (194)
Q Consensus 16 ~dg~l~fwD~~~~~--~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~---~~~~~~~~~wr 90 (194)
.++.|...|.+... .+..........|+.+|.+++|..+... ..+.|...+.+|.....+ ....-..++|.
T Consensus 97 ~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~----~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d 172 (316)
T 1ijq_A 97 VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYSLVTENIQWPNGITLD 172 (316)
T ss_dssp TTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS----SSCEEEEEETTSCCEEEEECSSCSCEEEEEEE
T ss_pred CCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccC----CCCeEEEEcCCCCCeEEEEECCCCCceEEEEe
Confidence 36777778876432 2222233567899999977754433310 125677777788765543 24556799999
Q ss_pred eCCCcee
Q psy13461 91 PRPASLL 97 (194)
Q Consensus 91 P~~~~Ll 97 (194)
|++..|.
T Consensus 173 ~~~~~lY 179 (316)
T 1ijq_A 173 LLSGRLY 179 (316)
T ss_dssp TTTTEEE
T ss_pred ccCCEEE
Confidence 9766554
No 272
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=89.48 E-value=1.5 Score=35.92 Aligned_cols=90 Identities=11% Similarity=0.003 Sum_probs=53.6
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeec---cCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAE---HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIK 77 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~---h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~ 77 (194)
|++ |++.++.|...++.|..+|+.+++.+.... +..--.++.+.+--|++++ .++.+.++|. +++++.
T Consensus 28 ~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw-------~~~~v~v~D~~tl~~~~ 99 (243)
T 3mbr_X 28 YLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTW-------RNHEGFVYDLATLTPRA 99 (243)
T ss_dssp EET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEES-------SSSEEEEEETTTTEEEE
T ss_pred EEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEe-------eCCEEEEEECCcCcEEE
Confidence 565 677777773224589999999998877642 2222334444332233332 2788999998 588888
Q ss_pred eeCCCCEEEEEEeeCCCceeccc
Q psy13461 78 RFNSPTFCQLRWRPRPASLLSKE 100 (194)
Q Consensus 78 ~~~~~~~~~~~wrP~~~~Lls~~ 100 (194)
+++... ......+++..|....
T Consensus 100 ti~~~~-~Gwglt~dg~~L~vSd 121 (243)
T 3mbr_X 100 RFRYPG-EGWALTSDDSHLYMSD 121 (243)
T ss_dssp EEECSS-CCCEEEECSSCEEEEC
T ss_pred EEeCCC-CceEEeeCCCEEEEEC
Confidence 776221 1233346676655443
No 273
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=89.45 E-value=0.49 Score=43.93 Aligned_cols=44 Identities=5% Similarity=0.004 Sum_probs=31.3
Q ss_pred CCeEEEEee-cCcEEEeeC-CCCEEEEEEeeCCCceecccchhHHH
Q psy13461 63 DTGYWQWSF-QGKIIKRFN-SPTFCQLRWRPRPASLLSKEQVDKIK 106 (194)
Q Consensus 63 D~~~~IW~~-~G~~l~~~~-~~~~~~~~wrP~~~~Lls~~~~~~Ik 106 (194)
++.+..||. +|+.+.+.. ......-.+.+.+..++.++.++.|+
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~ 499 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVI 499 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEE
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEE
Confidence 367889999 699887765 33344446677788888888777665
No 274
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=88.31 E-value=5.7 Score=33.21 Aligned_cols=76 Identities=9% Similarity=-0.053 Sum_probs=46.7
Q ss_pred CCeEEEEECCCC--eEEeeeccCceEEEEECCCCCEEEEeecCcccccC-CeEEEEeecCcEEEeeC---CCCEEEEEEe
Q psy13461 17 TGSLEFVDTGDF--SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKAD-TGYWQWSFQGKIIKRFN---SPTFCQLRWR 90 (194)
Q Consensus 17 dg~l~fwD~~~~--~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D-~~~~IW~~~G~~l~~~~---~~~~~~~~wr 90 (194)
.+.|...+++.. +.+..........|+.+|.+.+|..+.. .. +.|...+.+|.....+. ...-..++|.
T Consensus 137 ~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~-----~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d 211 (349)
T 3v64_C 137 TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDW-----GNTPRIEASSMDGSGRRIIADTHLFWPNGLTID 211 (349)
T ss_dssp TTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEEC-----SSSCEEEEEETTSCSCEESCCSSCSCEEEEEEE
T ss_pred CCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEecc-----CCCCEEEEEeCCCCCcEEEEECCCCCcceEEEe
Confidence 567777776642 2222222345789999997765544432 13 66777788887555442 3446789999
Q ss_pred eCCCcee
Q psy13461 91 PRPASLL 97 (194)
Q Consensus 91 P~~~~Ll 97 (194)
|++..|.
T Consensus 212 ~~~~~lY 218 (349)
T 3v64_C 212 YAGRRMY 218 (349)
T ss_dssp TTTTEEE
T ss_pred CCCCEEE
Confidence 8665543
No 275
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=88.29 E-value=1.8 Score=36.65 Aligned_cols=62 Identities=8% Similarity=0.152 Sum_probs=36.3
Q ss_pred ceEEEEECCCCCEEEEeecCccc-------ccCCeEEEEeecCc----------EEEeeCCCCEEEEEEee-CCCceecc
Q psy13461 38 QATDVEWDPTGRYVMSGVSLWKT-------KADTGYWQWSFQGK----------IIKRFNSPTFCQLRWRP-RPASLLSK 99 (194)
Q Consensus 38 ~vt~v~WsPdGr~lat~ss~~~~-------~~D~~~~IW~~~G~----------~l~~~~~~~~~~~~wrP-~~~~Lls~ 99 (194)
....++|+|||.+++|-++.-.. ...+.|.-.+.+|. .++......-+.++|.| .+...++.
T Consensus 136 ~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 136 NGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATE 215 (354)
T ss_dssp CCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEE
T ss_pred CCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEe
Confidence 45789999999988875431100 01123444444565 34433445567899999 66655554
No 276
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=88.16 E-value=1.4 Score=36.74 Aligned_cols=87 Identities=6% Similarity=-0.132 Sum_probs=54.8
Q ss_pred cCCCCEEEEeecCCCCeEEEEECCCCeEEeeeccC-ceEEEEECCCCCEEEEeecCcccccCCeEEEEeec-CcEEEeeC
Q psy13461 3 CTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHH-QATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIKRFN 80 (194)
Q Consensus 3 SP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h~-~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~-G~~l~~~~ 80 (194)
+++|+.|-.++- .++.+.+||..+++.+.+.... .-..++ +||+.|..+.. ++.+.++|.. ++.+.+..
T Consensus 102 t~~g~~Ly~ltw-~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSdG------s~~l~~iDp~T~~v~~~I~ 172 (268)
T 3nok_A 102 ASDGERLYQLTW-TEGLLFTWSGMPPQRERTTRYSGEGWGLC--YWNGKLVRSDG------GTMLTFHEPDGFALVGAVQ 172 (268)
T ss_dssp EECSSCEEEEES-SSCEEEEEETTTTEEEEEEECSSCCCCEE--EETTEEEEECS------SSEEEEECTTTCCEEEEEE
T ss_pred EEeCCEEEEEEc-cCCEEEEEECCcCcEEEEEeCCCceeEEe--cCCCEEEEECC------CCEEEEEcCCCCeEEEEEE
Confidence 355555544443 5899999999999988876431 123444 45666655553 6788888874 66666543
Q ss_pred -------CCCEEEEEEeeCCCceecc
Q psy13461 81 -------SPTFCQLRWRPRPASLLSK 99 (194)
Q Consensus 81 -------~~~~~~~~wrP~~~~Lls~ 99 (194)
...++.+.|. +|...+..
T Consensus 173 V~~~g~~v~~lNeLe~~-dG~lyanv 197 (268)
T 3nok_A 173 VKLRGQPVELINELECA-NGVIYANI 197 (268)
T ss_dssp CEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred eCCCCcccccccccEEe-CCEEEEEE
Confidence 2356677777 66555444
No 277
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=87.23 E-value=8.3 Score=31.55 Aligned_cols=89 Identities=9% Similarity=-0.052 Sum_probs=51.8
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCC----C--eEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGD----F--SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKI 75 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~----~--~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~ 75 (194)
|+|+++.|..+.. .++.|..+|.++ . ..+..........++++|.++.|..+.. ..+.|.+.+..|..
T Consensus 37 ~d~~~~~ly~~D~-~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~-----~~~~I~~~~~~g~~ 110 (316)
T 1ijq_A 37 TEVASNRIYWSDL-SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS-----VLGTVSVADTKGVK 110 (316)
T ss_dssp EETTTTEEEEEET-TTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEET-----TTTEEEEEETTSSS
T ss_pred EEeCCCEEEEEEC-CCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEEC-----CCCEEEEEeCCCCc
Confidence 5666655555443 467888888764 1 1121111235678999986655543332 36788899998875
Q ss_pred EEee---CCCCEEEEEEeeCCCce
Q psy13461 76 IKRF---NSPTFCQLRWRPRPASL 96 (194)
Q Consensus 76 l~~~---~~~~~~~~~wrP~~~~L 96 (194)
...+ ....-..++..|.+..|
T Consensus 111 ~~~~~~~~~~~P~~iavdp~~g~l 134 (316)
T 1ijq_A 111 RKTLFRENGSKPRAIVVDPVHGFM 134 (316)
T ss_dssp EEEEEECTTCCEEEEEEETTTTEE
T ss_pred eEEEEECCCCCcceEEeCCCCCEE
Confidence 4433 24567788888855433
No 278
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=86.59 E-value=5 Score=34.10 Aligned_cols=76 Identities=9% Similarity=-0.053 Sum_probs=45.1
Q ss_pred CCeEEEEECCCC--eEEeeeccCceEEEEECCCCCEEEEeecCcccccC-CeEEEEeecCcEEEeeC---CCCEEEEEEe
Q psy13461 17 TGSLEFVDTGDF--SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKAD-TGYWQWSFQGKIIKRFN---SPTFCQLRWR 90 (194)
Q Consensus 17 dg~l~fwD~~~~--~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D-~~~~IW~~~G~~l~~~~---~~~~~~~~wr 90 (194)
.+.|.+.+++.. +.+..........|+.+|.+.+|..+.. .. +.|...+.+|.....+. ...-..++|.
T Consensus 180 ~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~-----~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd 254 (386)
T 3v65_B 180 TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDW-----GNTPRIEASSMDGSGRRIIADTHLFWPNGLTID 254 (386)
T ss_dssp TTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEEC-----SSSCEEEEEETTSCSCEEEECSSCSCEEEEEEE
T ss_pred CCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEecc-----CCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEe
Confidence 455666665532 2222222346789999998776554432 13 56777777886544432 3446789999
Q ss_pred eCCCcee
Q psy13461 91 PRPASLL 97 (194)
Q Consensus 91 P~~~~Ll 97 (194)
|++..|.
T Consensus 255 ~~~~~lY 261 (386)
T 3v65_B 255 YAGRRMY 261 (386)
T ss_dssp GGGTEEE
T ss_pred CCCCEEE
Confidence 8665553
No 279
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=85.88 E-value=1.5 Score=36.09 Aligned_cols=61 Identities=10% Similarity=0.253 Sum_probs=46.1
Q ss_pred CceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEeeCC---CCEEEEEEeeCCCceecccch
Q psy13461 37 HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRFNS---PTFCQLRWRPRPASLLSKEQV 102 (194)
Q Consensus 37 ~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~~~---~~~~~~~wrP~~~~Lls~~~~ 102 (194)
..++.++|+|++..|.+.+. .++.+...|.+|+.+++.+. ...-.+++.+++..+++.+..
T Consensus 27 ~~lSGla~~~~~~~L~aV~d-----~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~ 90 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTIN-----KPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERD 90 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEE-----TTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEETTT
T ss_pred cCcceeEEeCCCCEEEEEEC-----CCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEECCC
Confidence 46999999998776666554 26677778889999998753 578889999988876765433
No 280
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=84.91 E-value=7.5 Score=32.20 Aligned_cols=85 Identities=13% Similarity=0.016 Sum_probs=47.9
Q ss_pred CCeEEEEECCCC--eEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEeeC---CCCEEEEEEee
Q psy13461 17 TGSLEFVDTGDF--SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRFN---SPTFCQLRWRP 91 (194)
Q Consensus 17 dg~l~fwD~~~~--~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~~---~~~~~~~~wrP 91 (194)
.+.|.+.+.+.. +.+..........|+.+|.+.+|..+.. . ..+.|...+.+|.....+. ...-+.++|.|
T Consensus 100 ~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~--~--~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~ 175 (318)
T 3sov_A 100 TNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDW--G--EVPKIERAGMDGSSRFIIINSEIYWPNGLTLDY 175 (318)
T ss_dssp TTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEEC--S--SSCEEEEEETTSCSCEEEECSSCSCEEEEEEET
T ss_pred CCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEec--C--CCCEEEEEEcCCCCeEEEEECCCCCccEEEEec
Confidence 456667776542 2222223356789999997665544331 0 1356666777786544432 34457899999
Q ss_pred CCCce-ecccchhHH
Q psy13461 92 RPASL-LSKEQVDKI 105 (194)
Q Consensus 92 ~~~~L-ls~~~~~~I 105 (194)
++..| .+.+....|
T Consensus 176 ~~~~lY~aD~~~~~I 190 (318)
T 3sov_A 176 EEQKLYWADAKLNFI 190 (318)
T ss_dssp TTTEEEEEETTTTEE
T ss_pred cCCEEEEEECCCCEE
Confidence 65544 444433333
No 281
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=84.89 E-value=1.9 Score=39.09 Aligned_cols=77 Identities=12% Similarity=0.006 Sum_probs=47.5
Q ss_pred CCeEEEEECCCCeEEeeecc-CceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEeeCC-CCE--EEEEEee
Q psy13461 17 TGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKRFNS-PTF--CQLRWRP 91 (194)
Q Consensus 17 dg~l~fwD~~~~~~i~~~~h-~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~~~~-~~~--~~~~wrP 91 (194)
+|.|.-||..+++.+-+..+ ..+........|..|..++ .|+.+..||. +|+++.+... ..+ ..+.+.+
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~------~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~ 516 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYAT------LDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSF 516 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEEC------TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEc------CCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEE
Confidence 47899999988887654332 2222222233455566665 3899999998 6999987652 111 2345678
Q ss_pred CCCceecc
Q psy13461 92 RPASLLSK 99 (194)
Q Consensus 92 ~~~~Lls~ 99 (194)
++..++..
T Consensus 517 ~G~~yv~~ 524 (571)
T 2ad6_A 517 KGKQYIGS 524 (571)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEEE
Confidence 88765543
No 282
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=84.86 E-value=4.3 Score=33.24 Aligned_cols=87 Identities=10% Similarity=-0.011 Sum_probs=53.0
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECCC---------CeEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTGD---------FSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF 71 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~~---------~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~ 71 (194)
.|+|+|.+-|+ . +|.|.-.+..+ .+.|....-..-..+.|+|+|.+.|+ + |+.+.-++-
T Consensus 47 af~P~G~LYaV-~---~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~-------dG~iyr~~p 114 (236)
T 1tl2_A 47 FLSPGGELYGV-L---NDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-S-------KDKLYKASP 114 (236)
T ss_dssp EECTTSCEEEE-E---TTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-E-------TTEEEEESC
T ss_pred EECCCccEEEE-e---CCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-C-------CCEEEEeCC
Confidence 38999997777 4 57765556533 12333221223578999999999888 4 544433333
Q ss_pred --c--------CcEEEeeCCCCEEEEEEeeCCCceecc
Q psy13461 72 --Q--------GKIIKRFNSPTFCQLRWRPRPASLLSK 99 (194)
Q Consensus 72 --~--------G~~l~~~~~~~~~~~~wrP~~~~Lls~ 99 (194)
+ +..+-...-..|..+.+.|+|..-+-.
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 1 223322223567888999998866555
No 283
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=84.69 E-value=2.9 Score=34.82 Aligned_cols=85 Identities=9% Similarity=0.090 Sum_probs=45.0
Q ss_pred ccCCCCEEEEeec-C-CCCeEEEEECCCC--eEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEE
Q psy13461 2 KCTMGTHIVLAEL-R-DTGSLEFVDTGDF--SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 77 (194)
Q Consensus 2 fSP~G~~la~ag~-~-~dg~l~fwD~~~~--~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~ 77 (194)
|||+|++|+-+.. . .+..|..-+++.. +.+.. +. + .+|+|+|+.|.-.+. ....|..-++.|....
T Consensus 111 ~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~--~~-~--~~~~~~g~~iy~t~~-----g~~~Iy~~~l~g~~~~ 180 (302)
T 3s25_A 111 ASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKN--HY-L--FTCNTSDRYFYYNNP-----KNGQLYRYDTASQSEA 180 (302)
T ss_dssp EEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEES--SC-C--CCSEEETTEEEEECT-----TTCCEEEEETTTTEEE
T ss_pred EEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeC--CC-c--eEeeEECCEEEEEeC-----CCceEEEEECCCCCEE
Confidence 6788888876641 0 2445555566632 22222 22 2 467889998875442 1345555556665443
Q ss_pred eeCCCCEEEEEEeeCCCcee
Q psy13461 78 RFNSPTFCQLRWRPRPASLL 97 (194)
Q Consensus 78 ~~~~~~~~~~~wrP~~~~Ll 97 (194)
.+....... .+.|++..|.
T Consensus 181 ~l~~~~~~~-~~~P~g~~iy 199 (302)
T 3s25_A 181 LFYDCNCYK-PVVLDDTNVY 199 (302)
T ss_dssp EEECSCEEE-EEEEETTEEE
T ss_pred EEeCCCccc-eeeecCCEEE
Confidence 332233332 3447776655
No 284
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=84.23 E-value=8.8 Score=33.28 Aligned_cols=99 Identities=5% Similarity=0.018 Sum_probs=60.4
Q ss_pred CccCCCCEEEEeecCCCCeEEEEECC--CCe-----EEe-e-ec------------cCceEEEEE---------CCCCCE
Q psy13461 1 MKCTMGTHIVLAELRDTGSLEFVDTG--DFS-----VMN-A-AE------------HHQATDVEW---------DPTGRY 50 (194)
Q Consensus 1 ~fSP~G~~la~ag~~~dg~l~fwD~~--~~~-----~i~-~-~~------------h~~vt~v~W---------sPdGr~ 50 (194)
.|+|+|++|..+.. .++.|..+|.+ ++. .+. . +. -.....+++ +++|++
T Consensus 279 a~dpdG~~LYvad~-~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~l 357 (433)
T 4hw6_A 279 VWHPTGDWAYIIYN-GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDF 357 (433)
T ss_dssp EECTTSSEEEEEET-TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEE
T ss_pred EEeCCCCEEEEEeC-CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcE
Confidence 37899995555543 47889888865 221 111 1 00 123567999 899987
Q ss_pred EEEeecCcccccCCeEEEEeecCcEEEeeC-------------------CCCEEEEEEe-eCCCceecccchhHHH
Q psy13461 51 VMSGVSLWKTKADTGYWQWSFQGKIIKRFN-------------------SPTFCQLRWR-PRPASLLSKEQVDKIK 106 (194)
Q Consensus 51 lat~ss~~~~~~D~~~~IW~~~G~~l~~~~-------------------~~~~~~~~wr-P~~~~Lls~~~~~~Ik 106 (194)
+++-.. .+.|+.++.+|....-.. ...=..+++. +++..+++...-..||
T Consensus 358 yvaD~~------n~~I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr 427 (433)
T 4hw6_A 358 YFCDRD------SHTVRVLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVR 427 (433)
T ss_dssp EEEETT------TTEEEEECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEE
T ss_pred EEEECC------CCEEEEECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEE
Confidence 766553 566777777775443221 2235678999 6777777766555554
No 285
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=83.89 E-value=4.4 Score=36.55 Aligned_cols=98 Identities=9% Similarity=0.047 Sum_probs=57.3
Q ss_pred ccCCCCEEEEeecCCCC------eEEEEECCC-C--------eEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeE
Q psy13461 2 KCTMGTHIVLAELRDTG------SLEFVDTGD-F--------SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGY 66 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg------~l~fwD~~~-~--------~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~ 66 (194)
++|+|++|.++.- .++ .|.+.+... + ..+... ..+..++.+|++++|..+.. ..+.+
T Consensus 200 ~d~~G~~lyvad~-~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~--~~p~giavdp~~g~LYvtd~-----~~g~V 271 (496)
T 3kya_A 200 YADEAEYMIVAID-YDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY--KQCNGATIHPINGELYFNSY-----EKGQV 271 (496)
T ss_dssp TBCTTCEEEEEEC-CCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE--SCCCCEEECTTTCCEEEEET-----TTTEE
T ss_pred cCCCCCEEEEEeC-CCCCcccCceEEEEecCCCCceeecccceeeccC--CCceEEEEcCCCCeEEEEEC-----CCCEE
Confidence 3899997777653 121 255665443 1 223222 34567889995555444442 26678
Q ss_pred EEEeec--------CcE--------------EEeeC-CCCEEEEEEeeCCC-ceecccchhHHHh
Q psy13461 67 WQWSFQ--------GKI--------------IKRFN-SPTFCQLRWRPRPA-SLLSKEQVDKIKK 107 (194)
Q Consensus 67 ~IW~~~--------G~~--------------l~~~~-~~~~~~~~wrP~~~-~Lls~~~~~~Ikk 107 (194)
..+|+. |.+ +.... ...-+.++|+|++. ..++......|++
T Consensus 272 ~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~k 336 (496)
T 3kya_A 272 FRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMR 336 (496)
T ss_dssp EEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred EEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEE
Confidence 888886 332 22232 23457899999999 4666555555654
No 286
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=82.94 E-value=15 Score=33.79 Aligned_cols=87 Identities=10% Similarity=0.093 Sum_probs=56.2
Q ss_pred CCCCEEEEeecCCCCeEEEEECCCCeEEee------eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEE
Q psy13461 4 TMGTHIVLAELRDTGSLEFVDTGDFSVMNA------AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 77 (194)
Q Consensus 4 P~G~~la~ag~~~dg~l~fwD~~~~~~i~~------~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~ 77 (194)
++|++|-+|+ .++-|..||..+++...- .....|.++..+++|+..+.. .+|+.+|+.......
T Consensus 415 ~~g~~lWigt--~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt--------~~Gl~~~~~~~~~~~ 484 (795)
T 4a2l_A 415 EKKSLVYIGT--HAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT--------LSALVRFNPEQRSFT 484 (795)
T ss_dssp TTTTEEEEEE--TTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE--------SSCEEEEETTTTEEE
T ss_pred CCCCEEEEEe--CcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe--------cCceeEEeCCCCeEE
Confidence 5677455565 356688999877554322 123579999999999965533 247888887644333
Q ss_pred eeC---------CCCEEEEEEeeCCCceeccc
Q psy13461 78 RFN---------SPTFCQLRWRPRPASLLSKE 100 (194)
Q Consensus 78 ~~~---------~~~~~~~~wrP~~~~Lls~~ 100 (194)
... ...|.++...+++...+...
T Consensus 485 ~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~ 516 (795)
T 4a2l_A 485 TIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE 516 (795)
T ss_dssp ECCBCTTCCBCCCCCEEEEEECTTCCEEEEES
T ss_pred EccccccccccCCceEEEEEECCCCCEEEEeC
Confidence 321 35688888888887666543
No 287
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=82.87 E-value=2.2 Score=35.91 Aligned_cols=18 Identities=11% Similarity=0.302 Sum_probs=14.3
Q ss_pred ceEEEEECCCCCEEEEee
Q psy13461 38 QATDVEWDPTGRYVMSGV 55 (194)
Q Consensus 38 ~vt~v~WsPdGr~lat~s 55 (194)
....++|+|||.+++|-+
T Consensus 136 ~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 136 SGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp CCCCEEECTTSCEEEECC
T ss_pred CCceEEECCCCCEEEEEC
Confidence 347899999998877754
No 288
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=82.67 E-value=15 Score=30.61 Aligned_cols=87 Identities=6% Similarity=-0.051 Sum_probs=47.4
Q ss_pred cCCCCEEEEeecCCCCeEEEEECCCCe--EEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEee-
Q psy13461 3 CTMGTHIVLAELRDTGSLEFVDTGDFS--VMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRF- 79 (194)
Q Consensus 3 SP~G~~la~ag~~~dg~l~fwD~~~~~--~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~- 79 (194)
+|.++.|..+.. .++.|.-++.+... .+..........++++|.++.|..+.. ..+.|.+.+.+|.....+
T Consensus 81 d~~~~~ly~~D~-~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~-----~~~~I~~~~~dG~~~~~l~ 154 (349)
T 3v64_C 81 HHRRELVFWSDV-TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDS-----GTSRIEVANLDGAHRKVLL 154 (349)
T ss_dssp ETTTTEEEEEET-TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET-----TTTEEEEEETTSCSCEEEE
T ss_pred eccccEEEEEec-cCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcC-----CCCeEEEEcCCCCceEEEE
Confidence 444443333332 34556666655422 121111234578999986555443332 267888889888754333
Q ss_pred --CCCCEEEEEEeeCCCc
Q psy13461 80 --NSPTFCQLRWRPRPAS 95 (194)
Q Consensus 80 --~~~~~~~~~wrP~~~~ 95 (194)
....-..++..|.+..
T Consensus 155 ~~~l~~P~~iavdp~~g~ 172 (349)
T 3v64_C 155 WQSLEKPRAIALHPMEGT 172 (349)
T ss_dssp CTTCSCEEEEEEETTTTE
T ss_pred eCCCCCcceEEEecCcCe
Confidence 2455678888885443
No 289
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=82.30 E-value=14 Score=34.04 Aligned_cols=88 Identities=10% Similarity=0.029 Sum_probs=55.8
Q ss_pred cCCCCEEEEeecCCCCeEEEEECCCCeEEee----------eccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeec
Q psy13461 3 CTMGTHIVLAELRDTGSLEFVDTGDFSVMNA----------AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ 72 (194)
Q Consensus 3 SP~G~~la~ag~~~dg~l~fwD~~~~~~i~~----------~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~ 72 (194)
.++|++.+ |+ .+|-|..||..+.....- ..+..|.+++.+++|++|-.|+. ++|+.+||.+
T Consensus 365 d~~g~lWi-Gt--~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~------~~Gl~~~d~~ 435 (795)
T 4a2l_A 365 DKDKNLWI-GT--NDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTH------AGGLSILHRN 435 (795)
T ss_dssp CTTSCEEE-EE--SSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEET------TTEEEEEETT
T ss_pred CCCCCEEE-EE--CCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeC------cCceeEEeCC
Confidence 35666554 44 355688888776443221 12356899999999993444442 6789999986
Q ss_pred CcEEEee-------CCCCEEEEEEeeCCCceecc
Q psy13461 73 GKIIKRF-------NSPTFCQLRWRPRPASLLSK 99 (194)
Q Consensus 73 G~~l~~~-------~~~~~~~~~wrP~~~~Lls~ 99 (194)
+..+... ....|+.+...+++...+..
T Consensus 436 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt 469 (795)
T 4a2l_A 436 SGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT 469 (795)
T ss_dssp TCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE
T ss_pred CCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe
Confidence 4433332 24568888888888765544
No 290
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=80.76 E-value=8 Score=33.96 Aligned_cols=20 Identities=15% Similarity=0.137 Sum_probs=16.1
Q ss_pred CceEEEEECCCCCEEEEeec
Q psy13461 37 HQATDVEWDPTGRYVMSGVS 56 (194)
Q Consensus 37 ~~vt~v~WsPdGr~lat~ss 56 (194)
+....|+|+|||.++++.++
T Consensus 144 H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 144 HQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CCEEEEEECTTSCEEEEECC
T ss_pred CCCCeEeECCCCeEEEEECC
Confidence 45799999999998877553
No 291
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=80.52 E-value=12 Score=31.61 Aligned_cols=89 Identities=7% Similarity=-0.032 Sum_probs=48.9
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeE--EeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEee
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSV--MNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRF 79 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~--i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~ 79 (194)
|+|.++.|..+.. .++.|..++.+.... +..........++++|.++.|..+.. ..+.|.+.+++|.....+
T Consensus 123 ~d~~~~~ly~~D~-~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~-----~~~~I~~~~~dg~~~~~l 196 (386)
T 3v65_B 123 FHHRRELVFWSDV-TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDS-----GTSRIEVANLDGAHRKVL 196 (386)
T ss_dssp EETTTTEEEEEET-TTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEET-----TTTEEEECBTTSCSCEEE
T ss_pred EecCCCeEEEEeC-CCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcC-----CCCeEEEEeCCCCceEEe
Confidence 4454444444333 356677777665322 21112234577889986555543332 256778888877643332
Q ss_pred ---CCCCEEEEEEeeCCCce
Q psy13461 80 ---NSPTFCQLRWRPRPASL 96 (194)
Q Consensus 80 ---~~~~~~~~~wrP~~~~L 96 (194)
....-..++..|.+..|
T Consensus 197 ~~~~l~~P~giavdp~~g~l 216 (386)
T 3v65_B 197 LWQSLEKPRAIALHPMEGTI 216 (386)
T ss_dssp ECSSCSCEEEEEEETTTTEE
T ss_pred ecCCCCCCcEEEEEcCCCeE
Confidence 23556778888755433
No 292
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=78.31 E-value=30 Score=29.33 Aligned_cols=87 Identities=9% Similarity=-0.023 Sum_probs=46.4
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCC------CeEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGD------FSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKI 75 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~------~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~ 75 (194)
|+|.++.|-.+.. .++.|.-++++. ...+....-.....++.++.++.|..+.. ..+.|.+.+++|..
T Consensus 119 ~d~~~~~lywsD~-~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~-----~~~~I~~~~~~g~~ 192 (400)
T 3p5b_L 119 TEVASNRIYWSDL-SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS-----VLGTVSVADTKGVK 192 (400)
T ss_dssp EETTTTEEEEEET-TTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEET-----TTTEEEEECTTTCS
T ss_pred eeeccCceEEEec-CCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEEC-----CCCeEEEEeCCCCc
Confidence 3444444433332 345566666553 11221112245788999985554444432 36678888888875
Q ss_pred EEee---CCCCEEEEEEeeCCC
Q psy13461 76 IKRF---NSPTFCQLRWRPRPA 94 (194)
Q Consensus 76 l~~~---~~~~~~~~~wrP~~~ 94 (194)
...+ ....-..++..|.+.
T Consensus 193 ~~~l~~~~~~~P~~iavdp~~g 214 (400)
T 3p5b_L 193 RKTLFRENGSKPRAIVVDPVHG 214 (400)
T ss_dssp EEEEEECSSCCEEEEEEETTTT
T ss_pred eEEEEeCCCCCcceEEEecccC
Confidence 5443 244566777777443
No 293
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=77.33 E-value=6.5 Score=36.24 Aligned_cols=58 Identities=10% Similarity=0.130 Sum_probs=36.8
Q ss_pred CccCCCCEEEEeecC----------CCCeEEEEECCCCeE--Eeeecc-CceEEEEECCCCCEEEEeecCc
Q psy13461 1 MKCTMGTHIVLAELR----------DTGSLEFVDTGDFSV--MNAAEH-HQATDVEWDPTGRYVMSGVSLW 58 (194)
Q Consensus 1 ~fSP~G~~la~ag~~----------~dg~l~fwD~~~~~~--i~~~~h-~~vt~v~WsPdGr~lat~ss~~ 58 (194)
.|+|+|++++.-.-+ .+..+...+..++++ +.+.+. ..++.++|+|||++|..+...|
T Consensus 482 ~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvniQHP 552 (592)
T 3zwu_A 482 GFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHP 552 (592)
T ss_dssp EECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEEST
T ss_pred EECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEEECC
Confidence 389999966553210 012345556555443 344433 5699999999999998887654
No 294
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=77.22 E-value=9.6 Score=34.55 Aligned_cols=72 Identities=15% Similarity=0.005 Sum_probs=45.3
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEee--eccCc-eEEEEECCCCCEEEEeecCcccccCCeEEEEeecCc
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNA--AEHHQ-ATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGK 74 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~--~~h~~-vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~ 74 (194)
+.++|+++|+||. .++++++||..+.+-... ..... -..++..|+|+.++.|+..-....-+.+.+||....
T Consensus 250 ~~~~g~lyv~GG~-~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 250 MDGNGQIVVTGGN-DAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp ECTTSCEEEECSS-STTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred CCCCCCEEEeCCC-CCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 3589999999986 356899999776443222 12111 134556689999999984211112356888888533
No 295
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=76.99 E-value=3.8 Score=37.19 Aligned_cols=76 Identities=20% Similarity=0.274 Sum_probs=47.2
Q ss_pred CCeEEEEECCCCeEEeeec-cCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEeeC-CCCE--EEEEEee
Q psy13461 17 TGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKRFN-SPTF--CQLRWRP 91 (194)
Q Consensus 17 dg~l~fwD~~~~~~i~~~~-h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~~~-~~~~--~~~~wrP 91 (194)
+|.|.-||+.+++.+=+.. ...+..-.....|..|..++ .|+.++.||. +|++|.+.. ...+ .-+.|..
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~------~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~ 538 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGT------GDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQ 538 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEEC------TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEEC------CCCcEEEEECCCCCEEEEecCCCCcccCceEEEE
Confidence 5789899999888764432 11221111112355666666 4999999998 699998775 2222 2367778
Q ss_pred CCCceec
Q psy13461 92 RPASLLS 98 (194)
Q Consensus 92 ~~~~Lls 98 (194)
+|...+.
T Consensus 539 ~G~qYv~ 545 (582)
T 1flg_A 539 DGEQYLG 545 (582)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 8874443
No 296
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=75.93 E-value=18 Score=30.78 Aligned_cols=69 Identities=4% Similarity=-0.098 Sum_probs=39.3
Q ss_pred cCCCCEEEEeecCCCCeEEEEECCCC--eEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEE
Q psy13461 3 CTMGTHIVLAELRDTGSLEFVDTGDF--SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKII 76 (194)
Q Consensus 3 SP~G~~la~ag~~~dg~l~fwD~~~~--~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l 76 (194)
.|.+.+|..+..+..+.|...+++.. +.+....-...+.|++||+++.|..+-+ ..+.|...|++|...
T Consensus 210 dp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~-----~~~~I~~~d~dG~~~ 280 (400)
T 3p5b_L 210 DPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS-----KLHSISSIDVNGGNR 280 (400)
T ss_dssp ETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCCC
T ss_pred ecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEEC-----CCCEEEEEeCCCCcc
Confidence 45444444333212356777776642 2222222246789999998777665553 256777778777543
No 297
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=75.87 E-value=4.1 Score=36.77 Aligned_cols=28 Identities=14% Similarity=0.167 Sum_probs=20.5
Q ss_pred CCCC---EEEEeecCCCCeEEEEECCCCeEEee
Q psy13461 4 TMGT---HIVLAELRDTGSLEFVDTGDFSVMNA 33 (194)
Q Consensus 4 P~G~---~la~ag~~~dg~l~fwD~~~~~~i~~ 33 (194)
++|+ .++.++ .+|.|...|..+++.+-.
T Consensus 311 ~~G~~~~~v~~~~--~~G~l~~lD~~tG~~~w~ 341 (571)
T 2ad6_A 311 VNGKMTPLLSHID--RNGILYTLNRENGNLIVA 341 (571)
T ss_dssp ETTEEEEEEEEEC--TTSEEEEEETTTCCEEEE
T ss_pred cCCcEEEEEEEeC--CCcEEEEEECCCCCEEee
Confidence 3564 455566 689999999998887654
No 298
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=75.49 E-value=22 Score=29.23 Aligned_cols=53 Identities=11% Similarity=0.031 Sum_probs=32.9
Q ss_pred CceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEee---CCCCEEEEEEeeCCC
Q psy13461 37 HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRF---NSPTFCQLRWRPRPA 94 (194)
Q Consensus 37 ~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~---~~~~~~~~~wrP~~~ 94 (194)
.....++++|.++.|..+.. ..+.|.+.+.+|.....+ ....-..++..|.+.
T Consensus 79 ~~p~glavd~~~g~ly~~d~-----~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g 134 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDS-----ETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSG 134 (318)
T ss_dssp SCCCEEEEETTTTEEEEEET-----TTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGT
T ss_pred CCccEEEEEcCCCeEEEEEC-----CCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCC
Confidence 34567899986554443332 267888899988644332 244566777777533
No 299
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=75.44 E-value=4.6 Score=33.52 Aligned_cols=87 Identities=8% Similarity=0.003 Sum_probs=46.9
Q ss_pred ccCCCCEEEEeecCC------------CCeEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEE
Q psy13461 2 KCTMGTHIVLAELRD------------TGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQW 69 (194)
Q Consensus 2 fSP~G~~la~ag~~~------------dg~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW 69 (194)
|+|+|.+|.=+.... .+.|...+++......... .. ...|+|+|.+|+-+... .++.-.||
T Consensus 60 i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~-~~--~~~~s~~g~~Iy~~~~~----~~~~~~Iy 132 (302)
T 3s25_A 60 INADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP-DP--CIYASLIGNYIYYLHYD----TQTATSLY 132 (302)
T ss_dssp EEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC-SC--EEEEEEETTEEEEEEES----SSSCEEEE
T ss_pred EEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec-CC--ccEEEEeCCEEEEEeec----CCCCceEE
Confidence 578888887775320 2456666776543211111 12 23789999999866500 12333444
Q ss_pred --eecCcEEEeeCCCCEEEEEEeeCCCcee
Q psy13461 70 --SFQGKIIKRFNSPTFCQLRWRPRPASLL 97 (194)
Q Consensus 70 --~~~G~~l~~~~~~~~~~~~wrP~~~~Ll 97 (194)
+++|....++....+ ..|.|++..|.
T Consensus 133 ~~~~dGs~~~~lt~~~~--~~~~~~g~~iy 160 (302)
T 3s25_A 133 RIRIDGEEKKKIKNHYL--FTCNTSDRYFY 160 (302)
T ss_dssp EEETTSCCCEEEESSCC--CCSEEETTEEE
T ss_pred EEECCCCCeEEEeCCCc--eEeeEECCEEE
Confidence 556765544433322 34566666665
No 300
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=75.12 E-value=5.3 Score=37.86 Aligned_cols=29 Identities=10% Similarity=0.189 Sum_probs=23.8
Q ss_pred CCCCEEEEeecCCCCeEEEEECCCCeEEeee
Q psy13461 4 TMGTHIVLAELRDTGSLEFVDTGDFSVMNAA 34 (194)
Q Consensus 4 P~G~~la~ag~~~dg~l~fwD~~~~~~i~~~ 34 (194)
++..||++-+ .|.+|++||+.+++++.+.
T Consensus 229 ~~~~fLftL~--~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 229 FHERYLIVLT--QNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp ETTTEEEEEE--TTCEEEEEETTTTEEEEEE
T ss_pred cCCcEEEEEE--cCCeEEEEEcCCCceEEee
Confidence 4567877777 6999999999999987764
No 301
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=75.05 E-value=8.1 Score=37.31 Aligned_cols=30 Identities=10% Similarity=0.050 Sum_probs=24.6
Q ss_pred cCCCCEEEEeecCCCCeEEEEECCCCeEEeee
Q psy13461 3 CTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA 34 (194)
Q Consensus 3 SP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~ 34 (194)
+++..||.+-+ .|++|++|++.+++|+.+.
T Consensus 244 ~~~~~~lftl~--~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 244 LSTYNVLVMLS--LDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp ETTTTEEEEEE--TTCEEEEEETTTTEEEEEE
T ss_pred cCCCcEEEEEE--CCCEEEEEECCCCCeEeee
Confidence 46677887777 6999999999999887763
No 302
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=74.36 E-value=3.4 Score=37.50 Aligned_cols=50 Identities=14% Similarity=0.265 Sum_probs=35.6
Q ss_pred CCCEEEEeecCCCCeEEEEECCCCeEEeeecc---CceEEEEECCCCC-EEEEeec
Q psy13461 5 MGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH---HQATDVEWDPTGR-YVMSGVS 56 (194)
Q Consensus 5 ~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h---~~vt~v~WsPdGr-~lat~ss 56 (194)
.|..|.+|+ .||.|+.+|..+++.+-+... ...+-+.|+.+|+ ||++.+.
T Consensus 496 agglvf~g~--~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 496 AGNLVFTGT--GDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVTVG 549 (582)
T ss_dssp TTTEEEEEC--TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred CCCEEEEEC--CCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEEcc
Confidence 466777777 699999999999998765432 1223467889998 6665553
No 303
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=74.03 E-value=2.5 Score=39.36 Aligned_cols=82 Identities=10% Similarity=0.014 Sum_probs=46.4
Q ss_pred CCCeEEEEECCCCeE--EeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEeeC---CCCEEEEEEe
Q psy13461 16 DTGSLEFVDTGDFSV--MNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRFN---SPTFCQLRWR 90 (194)
Q Consensus 16 ~dg~l~fwD~~~~~~--i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~~---~~~~~~~~wr 90 (194)
.++.|.+.|++.... +..........|+++|.+++|..+.. . ..+.|...++.|.....+. ...-..|+|.
T Consensus 473 ~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~--~--~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd 548 (699)
T 1n7d_A 473 VLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDW--G--TPAKIKKGGLNGVDIYSLVTENIQWPNGITLD 548 (699)
T ss_dssp TTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCC--S--SSCCEEBCCSSSCCCCEESCSSCSSCCCEEEC
T ss_pred cCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEccc--C--CCCeEEEEeCCCCCeeEEEeCCCCCccEEEEe
Confidence 357788888775332 22212245678999997665443321 0 1256667777776544332 3344578999
Q ss_pred eCCCce-ecccc
Q psy13461 91 PRPASL-LSKEQ 101 (194)
Q Consensus 91 P~~~~L-ls~~~ 101 (194)
|++..| ++.+.
T Consensus 549 ~~~~~LY~aD~~ 560 (699)
T 1n7d_A 549 LLSGRLYWVDSK 560 (699)
T ss_dssp TTTCCEEEEETT
T ss_pred ccCCEEEEEecC
Confidence 876554 44433
No 304
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=73.41 E-value=22 Score=28.95 Aligned_cols=64 Identities=14% Similarity=0.071 Sum_probs=40.8
Q ss_pred CCEEEEeecCCCCeEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEee
Q psy13461 6 GTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKRF 79 (194)
Q Consensus 6 G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~~ 79 (194)
+..|.+++ .+|.|..+|..+++.+-.........+..+ |..|..++. ++++..+|. +|+.+.+.
T Consensus 239 ~~~v~~~~--~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~--~~~l~~~~~------~g~l~~~d~~tG~~~w~~ 303 (376)
T 3q7m_A 239 NGVVFALA--YNGNLTALDLRSGQIMWKRELGSVNDFIVD--GNRIYLVDQ------NDRVMALTIDGGVTLWTQ 303 (376)
T ss_dssp TTEEEEEC--TTSCEEEEETTTCCEEEEECCCCEEEEEEE--TTEEEEEET------TCCEEEEETTTCCEEEEE
T ss_pred CCEEEEEe--cCcEEEEEECCCCcEEeeccCCCCCCceEE--CCEEEEEcC------CCeEEEEECCCCcEEEee
Confidence 44555665 578999999988887765444444444443 444555543 677888887 57776554
No 305
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=73.33 E-value=27 Score=32.02 Aligned_cols=86 Identities=14% Similarity=0.202 Sum_probs=55.1
Q ss_pred CCCCEEEEeecCCCCeEEEEECCCCeE--Eeeec-----cCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEE
Q psy13461 4 TMGTHIVLAELRDTGSLEFVDTGDFSV--MNAAE-----HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKII 76 (194)
Q Consensus 4 P~G~~la~ag~~~dg~l~fwD~~~~~~--i~~~~-----h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l 76 (194)
++|++.+ |+ . +-|..+|..+.+. ..... ...|.++..+++|+..++.. .+|+..||..+..+
T Consensus 459 ~~g~lwi-gt--~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-------~~Gl~~~~~~~~~~ 527 (781)
T 3v9f_A 459 KNKKIWI-GT--H-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-------GGGVGIYTPDMQLV 527 (781)
T ss_dssp TTSEEEE-EE--T-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-------SSCEEEECTTCCEE
T ss_pred CCCCEEE-EE--C-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-------CCCEEEEeCCCCeE
Confidence 4555443 34 2 4577788765433 22111 35689999999999766443 56888888876555
Q ss_pred EeeC------CCCEEEEEEeeCCCceeccc
Q psy13461 77 KRFN------SPTFCQLRWRPRPASLLSKE 100 (194)
Q Consensus 77 ~~~~------~~~~~~~~wrP~~~~Lls~~ 100 (194)
.... ...|..+.-.++|...++..
T Consensus 528 ~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~ 557 (781)
T 3v9f_A 528 RKFNQYEGFCSNTINQIYRSSKGQMWLATG 557 (781)
T ss_dssp EEECTTTTCSCSCEEEEEECTTSCEEEEET
T ss_pred EEccCCCCCCCCeeEEEEECCCCCEEEEEC
Confidence 4432 45688888888888666543
No 306
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=72.84 E-value=19 Score=29.38 Aligned_cols=26 Identities=12% Similarity=0.138 Sum_probs=19.0
Q ss_pred CCCEEEEeecCCCCeEEEEECCCCeEEe
Q psy13461 5 MGTHIVLAELRDTGSLEFVDTGDFSVMN 32 (194)
Q Consensus 5 ~G~~la~ag~~~dg~l~fwD~~~~~~i~ 32 (194)
+|..|.+++ .+|.|.-+|..+++.+-
T Consensus 52 ~~~~v~~~~--~~g~v~a~d~~tG~~~W 77 (376)
T 3q7m_A 52 ADNVVYAAD--RAGLVKALNADDGKEIW 77 (376)
T ss_dssp ETTEEEEEC--TTSEEEEEETTTCCEEE
T ss_pred ECCEEEEEc--CCCeEEEEEccCCceee
Confidence 355666666 57899999998877653
No 307
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=72.14 E-value=37 Score=29.87 Aligned_cols=99 Identities=10% Similarity=0.142 Sum_probs=56.3
Q ss_pred ccCCCC--EEEEeecCCCCeEEEEECCCCe---E-Ee------ee----ccCceEEEEECCC----CCEEEEeecCccc-
Q psy13461 2 KCTMGT--HIVLAELRDTGSLEFVDTGDFS---V-MN------AA----EHHQATDVEWDPT----GRYVMSGVSLWKT- 60 (194)
Q Consensus 2 fSP~G~--~la~ag~~~dg~l~fwD~~~~~---~-i~------~~----~h~~vt~v~WsPd----Gr~lat~ss~~~~- 60 (194)
|.|+|+ ++|+- ..|.|.+++.+... . +. .+ .......|+++|+ |.+.++.+..-..
T Consensus 21 ~~pdG~~rl~V~e---r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~~~ 97 (463)
T 2wg3_C 21 HSGDGSQRLFILE---KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQERW 97 (463)
T ss_dssp CCSSSSCCEEEEE---TTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCCSS
T ss_pred ECCCCCeEEEEEe---CCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCCCc
Confidence 789995 66665 57999999754311 1 11 11 0246889999997 6666665421000
Q ss_pred ---ccC--CeEEEEeec-----------CcEEEeeC----CCCEEEEEEeeCCCceecccchh
Q psy13461 61 ---KAD--TGYWQWSFQ-----------GKIIKRFN----SPTFCQLRWRPRPASLLSKEQVD 103 (194)
Q Consensus 61 ---~~D--~~~~IW~~~-----------G~~l~~~~----~~~~~~~~wrP~~~~Lls~~~~~ 103 (194)
..+ +.|.-|.+. .+.|.... ...-..|+|.|+|...++-++-.
T Consensus 98 ~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 98 AIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred ccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 000 122224442 12333322 34577899999999888877643
No 308
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=71.61 E-value=46 Score=28.62 Aligned_cols=91 Identities=16% Similarity=0.218 Sum_probs=57.2
Q ss_pred cCC-CC-EEEEeecCCCCeEEEEECC---C----CeEEeeecc-CceEEEEECCCCCEEEEeecCcccccCCeEEEEeec
Q psy13461 3 CTM-GT-HIVLAELRDTGSLEFVDTG---D----FSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ 72 (194)
Q Consensus 3 SP~-G~-~la~ag~~~dg~l~fwD~~---~----~~~i~~~~h-~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~ 72 (194)
||. |+ |+.+.+ .+|.+..|++. . .+.+.+... ..+-.|.-+|...+|..+- .+.+|+-++..
T Consensus 138 ~~~~g~~yafV~~--k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~e------Ed~GIw~~da~ 209 (355)
T 3amr_A 138 SQKTGKYYAMVTG--KEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAE------EDEAIWKFSAE 209 (355)
T ss_dssp CTTTCCEEEEEEC--SSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEE------TTTEEEEEECS
T ss_pred cCCCCcEEEEEEC--CCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEec------ccceEEEEeCC
Confidence 564 54 455555 57999998873 2 344555432 5688899999877888787 37776666643
Q ss_pred ------CcEEEeeC----CCCEEEEEE--eeCCC-ceecccc
Q psy13461 73 ------GKIIKRFN----SPTFCQLRW--RPRPA-SLLSKEQ 101 (194)
Q Consensus 73 ------G~~l~~~~----~~~~~~~~w--rP~~~-~Lls~~~ 101 (194)
++++.... ...+-.++. .+++. .|+..++
T Consensus 210 p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ 251 (355)
T 3amr_A 210 PDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ 251 (355)
T ss_dssp TTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG
T ss_pred cCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC
Confidence 45665543 235777777 45555 4555554
No 309
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=71.55 E-value=23 Score=32.27 Aligned_cols=85 Identities=8% Similarity=-0.010 Sum_probs=46.5
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCC---eEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDF---SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKR 78 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~---~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~ 78 (194)
|+|.+..|..+.. .++.|.-++.+.. +.+....-.....++.++.|+.|..+.. ..+.|.+.+++|.....
T Consensus 47 ~~~~~~~ly~sD~-~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~-----~~~~I~v~~~dG~~~~~ 120 (619)
T 3s94_A 47 FVFSHGLIYWSDV-SEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDS-----ETNRIEVSNLDGSLRKV 120 (619)
T ss_dssp EETTTTEEEEEET-TTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCSCEE
T ss_pred EEeCCCEEEEEEC-CCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeC-----CCCEEEEEECCCCCEEE
Confidence 4555555555443 3566666666543 2222222246789999997665555543 36788888998874333
Q ss_pred e---CCCCEEEEEEeeC
Q psy13461 79 F---NSPTFCQLRWRPR 92 (194)
Q Consensus 79 ~---~~~~~~~~~wrP~ 92 (194)
+ ....-..++..|.
T Consensus 121 l~~~~l~~P~~Iavdp~ 137 (619)
T 3s94_A 121 LFWQELDQPRAIALDPS 137 (619)
T ss_dssp EECSSCSCCCCEEEETT
T ss_pred EEeCCCCCCceEEEecC
Confidence 2 1233345555554
No 310
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=71.30 E-value=37 Score=32.11 Aligned_cols=52 Identities=10% Similarity=-0.137 Sum_probs=36.2
Q ss_pred CceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEeeC---CCCEEEEEEeeCC
Q psy13461 37 HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRFN---SPTFCQLRWRPRP 93 (194)
Q Consensus 37 ~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~~---~~~~~~~~wrP~~ 93 (194)
.....|+.++.|+.|..+.+ ..+.|.+.+++|.....+. ...-..|+..|..
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~-----~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~ 525 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDS-----VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVH 525 (791)
T ss_dssp SCCCEEEEETTTTEEEEEET-----TTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTT
T ss_pred CCcceeeeeecCCcEEEEec-----CCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCC
Confidence 45678999998876655543 3678888899887655442 4556788888763
No 311
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=70.85 E-value=12 Score=34.48 Aligned_cols=58 Identities=9% Similarity=0.107 Sum_probs=37.4
Q ss_pred ccCCCCEEE-Eee-cC--------CCCeEEEEECCCCeE--Eeeec-cCceEEEEECCCCCEEEEeecCcc
Q psy13461 2 KCTMGTHIV-LAE-LR--------DTGSLEFVDTGDFSV--MNAAE-HHQATDVEWDPTGRYVMSGVSLWK 59 (194)
Q Consensus 2 fSP~G~~la-~ag-~~--------~dg~l~fwD~~~~~~--i~~~~-h~~vt~v~WsPdGr~lat~ss~~~ 59 (194)
|+|+|.+.+ +-+ .+ .+..|..+|.+++++ +.... ...++.++|||||++|..+...|.
T Consensus 483 fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQHPG 553 (592)
T 4a9v_A 483 FDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHPG 553 (592)
T ss_dssp ECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEESTT
T ss_pred ECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeCCC
Confidence 788898776 322 00 122566667665554 33332 246899999999999999987544
No 312
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=70.31 E-value=8 Score=33.45 Aligned_cols=30 Identities=20% Similarity=0.445 Sum_probs=27.8
Q ss_pred CCeEEEEeecCcEEEeeCCCCEEEEEEeeC
Q psy13461 63 DTGYWQWSFQGKIIKRFNSPTFCQLRWRPR 92 (194)
Q Consensus 63 D~~~~IW~~~G~~l~~~~~~~~~~~~wrP~ 92 (194)
.+++.+||++|++|..++..+++.+..||.
T Consensus 49 ~~gL~Vydl~G~~l~~~~~g~~nnVD~r~~ 78 (355)
T 3amr_A 49 KSGLVVYSLDGKMLHSYNTGKLNNVDIRYD 78 (355)
T ss_dssp TTEEEEEETTSCEEEEECCSCEEEEEEEEE
T ss_pred CCCEEEEcCCCcEEEEccCCCcccEEEecc
Confidence 679999999999999998889999999994
No 313
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=69.01 E-value=34 Score=31.34 Aligned_cols=86 Identities=9% Similarity=0.030 Sum_probs=52.5
Q ss_pred CCCCEEEEeecCCCCeEEEEECCCCeEEe-----eeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEe
Q psy13461 4 TMGTHIVLAELRDTGSLEFVDTGDFSVMN-----AAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKR 78 (194)
Q Consensus 4 P~G~~la~ag~~~dg~l~fwD~~~~~~i~-----~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~ 78 (194)
++|++.+ |+ .++-|..||..+..... ......|.++.-+++|+..+ |+. ++|+..++.....+..
T Consensus 372 ~~g~lWi-gt--~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~------~~Gl~~~~~~~~~~~~ 441 (781)
T 3v9f_A 372 GQGKLWI-GT--DGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTY------LGNISYYNTRLKKFQI 441 (781)
T ss_dssp TTSCEEE-EE--BSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EET------TEEEEEECSSSCEEEE
T ss_pred CCCCEEE-Ee--CCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-Eec------cCCEEEEcCCCCcEEE
Confidence 4455443 33 24557778876543321 12235799999999998766 332 5788888886444443
Q ss_pred eC-----CCCEEEEEEeeCCCceecc
Q psy13461 79 FN-----SPTFCQLRWRPRPASLLSK 99 (194)
Q Consensus 79 ~~-----~~~~~~~~wrP~~~~Lls~ 99 (194)
.. ...|+.+.-.+++...+..
T Consensus 442 ~~~~~~~~~~v~~i~~d~~g~lwigt 467 (781)
T 3v9f_A 442 IELEKNELLDVRVFYEDKNKKIWIGT 467 (781)
T ss_dssp CCSTTTCCCCEEEEEECTTSEEEEEE
T ss_pred eccCCCCCCeEEEEEECCCCCEEEEE
Confidence 32 3568888877777655543
No 314
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=67.50 E-value=59 Score=30.70 Aligned_cols=89 Identities=10% Similarity=0.030 Sum_probs=49.8
Q ss_pred CCCCEEEEeecCCCCeEEEEECCCCe--EEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEeeC-
Q psy13461 4 TMGTHIVLAELRDTGSLEFVDTGDFS--VMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRFN- 80 (194)
Q Consensus 4 P~G~~la~ag~~~dg~l~fwD~~~~~--~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~~- 80 (194)
+.|+.|..+.. .++.|.+.+++... .+..........|+.+|.+.+|.-+.. . ..+.|...+++|.....+.
T Consensus 480 ~~~~~LY~tD~-~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~--g--~~~~I~~~~~dG~~~~~lv~ 554 (791)
T 3m0c_C 480 WIHSNIYWTDS-VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDW--G--TPAKIKKGGLNGVDIYSLVT 554 (791)
T ss_dssp TTTTEEEEEET-TTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEEC--S--SSCEEEEEETTSCCEEEEEC
T ss_pred ecCCcEEEEec-CCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecC--C--CCCeEEEEecCCCceEEEEe
Confidence 44444433332 35677777776422 222222345789999998555443321 0 1256777778887665543
Q ss_pred --CCCEEEEEEeeCCCcee
Q psy13461 81 --SPTFCQLRWRPRPASLL 97 (194)
Q Consensus 81 --~~~~~~~~wrP~~~~Ll 97 (194)
...-..|+..|....|.
T Consensus 555 ~~l~~P~GLavD~~~~~LY 573 (791)
T 3m0c_C 555 ENIQWPNGITLDLLSGRLY 573 (791)
T ss_dssp SSCSCEEEEEEETTTTEEE
T ss_pred CCCCCceEEEEecCCCeEE
Confidence 34567788887655443
No 315
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=66.22 E-value=13 Score=34.51 Aligned_cols=74 Identities=9% Similarity=0.029 Sum_probs=48.5
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCC----------eEEeee-ccCceEEEEE------CCCCCEEEEeecCccc----
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDF----------SVMNAA-EHHQATDVEW------DPTGRYVMSGVSLWKT---- 60 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~----------~~i~~~-~h~~vt~v~W------sPdGr~lat~ss~~~~---- 60 (194)
|.|+| +.-+.-| .|..|.-||++.. .++.+. -|+.+-++.= .|||+||++..-.-+-
T Consensus 385 Fd~~G-~aYTtlf-idSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~ 462 (638)
T 3sbq_A 385 FDGRG-NAYTTLF-IDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLP 462 (638)
T ss_dssp ECSSS-EEEEEET-TTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCC
T ss_pred ECCCC-ceEeeee-ecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcC
Confidence 78999 5555555 6999999998742 234333 3677777755 7999999999742210
Q ss_pred ---ccCCeEEEEeecCcEEE
Q psy13461 61 ---KADTGYWQWSFQGKIIK 77 (194)
Q Consensus 61 ---~~D~~~~IW~~~G~~l~ 77 (194)
-.-..-+|.|+.|..+.
T Consensus 463 vGpl~pen~QlidIsGdkM~ 482 (638)
T 3sbq_A 463 VGPLHPENDQLIDISGDEMK 482 (638)
T ss_dssp CSSSCCEEEEEEECSSSSCE
T ss_pred CCCCCCCcceeEecCCCceE
Confidence 01123588999887433
No 316
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=65.92 E-value=7.7 Score=35.98 Aligned_cols=92 Identities=9% Similarity=-0.082 Sum_probs=49.7
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCC----CeEEeee--ccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGD----FSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKI 75 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~----~~~i~~~--~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~ 75 (194)
|+|.++.|..+.. .++.|..+++++ ....... .......|++++.++.|..+.. ..+.|.+.+..|..
T Consensus 413 ~d~~~~~Ly~sD~-~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~-----~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 413 TEVASNRIYWSDL-SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS-----VLGTVSVADTKGVK 486 (699)
T ss_dssp EETTTTEEEECCT-TTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCT-----TTSCEEEEBSSSCC
T ss_pred cccccCeEEEEec-CCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEec-----cCCeEEEEecCCCc
Confidence 4555555555543 356777777664 1111111 1123567888865544433322 36788999998876
Q ss_pred EEeeC---CCCEEEEEEeeCCC-ceecc
Q psy13461 76 IKRFN---SPTFCQLRWRPRPA-SLLSK 99 (194)
Q Consensus 76 l~~~~---~~~~~~~~wrP~~~-~Lls~ 99 (194)
+..+. ...-..+++.|.+. ..+|.
T Consensus 487 ~~~l~~~~~~~P~giavDp~~g~ly~td 514 (699)
T 1n7d_A 487 RKTLFREQGSKPRAIVVDPVHGFMYWTD 514 (699)
T ss_dssp EEEECCCSSCCCCCEECCSSSSCCEECC
T ss_pred eEEEEeCCCCCcceEEEccCCCcEEEcc
Confidence 65542 33456777887543 33443
No 317
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=65.22 E-value=9.7 Score=31.92 Aligned_cols=54 Identities=7% Similarity=0.015 Sum_probs=33.4
Q ss_pred CccCCCCEEEEeecC-----------CCCeEEEEECCCC---------------eEEeeeccCceEEEEECC-CCCEEEE
Q psy13461 1 MKCTMGTHIVLAELR-----------DTGSLEFVDTGDF---------------SVMNAAEHHQATDVEWDP-TGRYVMS 53 (194)
Q Consensus 1 ~fSP~G~~la~ag~~-----------~dg~l~fwD~~~~---------------~~i~~~~h~~vt~v~WsP-dGr~lat 53 (194)
.|+|||.+.++.|-+ ..|.|.-.|.+.. ++... .+-....++|+| +|+.+++
T Consensus 136 ~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~-G~rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 136 VFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSY-GIRNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp EECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEE-CCSEEEEEEEETTTTEEEEE
T ss_pred EECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEE-cCcCccceEEECCCCCEEEE
Confidence 378999766664411 1256666676531 22222 345688999999 8988776
Q ss_pred ee
Q psy13461 54 GV 55 (194)
Q Consensus 54 ~s 55 (194)
-.
T Consensus 215 d~ 216 (353)
T 2g8s_A 215 EH 216 (353)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 318
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=62.81 E-value=29 Score=31.74 Aligned_cols=71 Identities=14% Similarity=0.090 Sum_probs=45.0
Q ss_pred ccCCCCEEEEeecCCCC-------------------eEEEEECCCCeEEeee---ccC--------ceEEEEECCCCC--
Q psy13461 2 KCTMGTHIVLAELRDTG-------------------SLEFVDTGDFSVMNAA---EHH--------QATDVEWDPTGR-- 49 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg-------------------~l~fwD~~~~~~i~~~---~h~--------~vt~v~WsPdGr-- 49 (194)
|+|++..|.+++ .++ .|.-+|..+++.+=+. +|. .+.......+|+
T Consensus 237 ~d~~~~~vy~~~--~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~ 314 (668)
T 1kv9_A 237 YDPELDLLYVGT--GNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPR 314 (668)
T ss_dssp EETTTTEEEEEC--CCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEE
T ss_pred EcCCCCEEEEeC--CCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEE
Confidence 456777777765 344 4888999988875432 221 122222334776
Q ss_pred -EEEEeecCcccccCCeEEEEee-cCcEEEeeC
Q psy13461 50 -YVMSGVSLWKTKADTGYWQWSF-QGKIIKRFN 80 (194)
Q Consensus 50 -~lat~ss~~~~~~D~~~~IW~~-~G~~l~~~~ 80 (194)
+|+.++. ++.+.++|. +|+++...+
T Consensus 315 ~~v~~~~~------~G~l~~lD~~tG~~l~~~~ 341 (668)
T 1kv9_A 315 KVLMQAPK------NGFFYVLDRTNGKLISAEK 341 (668)
T ss_dssp EEEEECCT------TSEEEEEETTTCCEEEEEE
T ss_pred EEEEEECC------CCEEEEEECCCCCEecccc
Confidence 6777764 888999987 699886543
No 319
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=58.62 E-value=20 Score=30.48 Aligned_cols=53 Identities=13% Similarity=0.066 Sum_probs=32.3
Q ss_pred ccCCCCEEEEeecC-----------CCCeEEEEECCCC----------eEEeeeccCceEEEEECCCCCEEEEee
Q psy13461 2 KCTMGTHIVLAELR-----------DTGSLEFVDTGDF----------SVMNAAEHHQATDVEWDPTGRYVMSGV 55 (194)
Q Consensus 2 fSP~G~~la~ag~~-----------~dg~l~fwD~~~~----------~~i~~~~h~~vt~v~WsPdGr~lat~s 55 (194)
|+|||.+.++.|-+ ..|.|.=.|.+.. ++... .|-+...++|+|+|+..++=.
T Consensus 147 fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~-G~RNp~Gla~dp~G~L~~~d~ 220 (347)
T 3das_A 147 FGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSY-GHRNVQGLAWDDKQRLFASEF 220 (347)
T ss_dssp ECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEB-CCSBCCEEEECTTCCEEEEEC
T ss_pred CCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEee-CCCCcceEEECCCCCEEEEec
Confidence 78999877775411 1244444465421 22322 345678899999999877654
No 320
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=55.67 E-value=14 Score=33.74 Aligned_cols=50 Identities=14% Similarity=0.124 Sum_probs=35.1
Q ss_pred CCCEEEEeecCCCCeEEEEECCCCeEEeeecc---CceEEEEECCCCC-EEEEeec
Q psy13461 5 MGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH---HQATDVEWDPTGR-YVMSGVS 56 (194)
Q Consensus 5 ~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h---~~vt~v~WsPdGr-~lat~ss 56 (194)
.|..|..++ .||.|+.+|..+++.+-+... ...+-+.|..+|+ ||++.+.
T Consensus 483 agg~vf~gt--~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~~~G 536 (599)
T 1w6s_A 483 AGDLVFYGT--LDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAIYYG 536 (599)
T ss_dssp TTTEEEEEC--TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred cCCEEEEEC--CCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEEEcc
Confidence 567777777 699999999999998765421 1234456778998 5666554
No 321
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=53.67 E-value=18 Score=33.10 Aligned_cols=58 Identities=17% Similarity=0.189 Sum_probs=42.1
Q ss_pred CCeEEEEECCCCeEEeeec-cCceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEeeC
Q psy13461 17 TGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKRFN 80 (194)
Q Consensus 17 dg~l~fwD~~~~~~i~~~~-h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~~~ 80 (194)
+|.|.-||..+++.+-+.. +...........|.+|.+++ .|+.++.||. +|+.+.+..
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~------~dg~l~a~d~~tG~~l~~~~ 496 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGT------AAGQMHAYSADKGEALWQFE 496 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEEC------TTSEEEEEETTTCCEEEEEE
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEEC------CcccchhhhhhcChhheEec
Confidence 3889999999998765432 23334445566777888876 4999999998 599887763
No 322
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=53.46 E-value=12 Score=36.71 Aligned_cols=29 Identities=10% Similarity=0.061 Sum_probs=24.2
Q ss_pred cCCCCEEEEeecCCCCeEEEEECCCCeEEee
Q psy13461 3 CTMGTHIVLAELRDTGSLEFVDTGDFSVMNA 33 (194)
Q Consensus 3 SP~G~~la~ag~~~dg~l~fwD~~~~~~i~~ 33 (194)
+++..||.+-+ .|++|++||+.+++|+.+
T Consensus 246 ~~~~~~lftL~--~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 246 LSTYNVLVMLS--LDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp ETTTTEEEEEB--TTCEEEEEETTTTEEEEE
T ss_pred cCCccEEEEEe--CCCEEEEEECCCCCeEEe
Confidence 46778888877 699999999999888765
No 323
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=52.46 E-value=27 Score=31.80 Aligned_cols=73 Identities=10% Similarity=0.047 Sum_probs=42.8
Q ss_pred CCeEEEEECCCCeEEeeecc-CceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEeeCC---CCEEEEEEee
Q psy13461 17 TGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKRFNS---PTFCQLRWRP 91 (194)
Q Consensus 17 dg~l~fwD~~~~~~i~~~~h-~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~~~~---~~~~~~~wrP 91 (194)
.|.|.-||+.+++.+=+..+ ..+..-.....|..|..++ .|+.++.||. +|++|.+... -.-.-+.|..
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt------~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~ 525 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGT------LDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTH 525 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEEC------TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred cCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEEC------CCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEe
Confidence 36788888888776544322 1111111122444555555 4999999998 6999987641 1123356667
Q ss_pred CCCc
Q psy13461 92 RPAS 95 (194)
Q Consensus 92 ~~~~ 95 (194)
+|..
T Consensus 526 ~G~q 529 (599)
T 1w6s_A 526 KGTQ 529 (599)
T ss_dssp TTEE
T ss_pred CCEE
Confidence 7764
No 324
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=50.18 E-value=1.4e+02 Score=27.12 Aligned_cols=91 Identities=7% Similarity=-0.046 Sum_probs=50.9
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCC--eEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEee
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDF--SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRF 79 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~--~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~ 79 (194)
|+|.+..|-.+.. .++.|.-++++.. +.+....-.....++.++.|+.|..+.. ..+.|.+.+++|.....+
T Consensus 44 ~d~~~~~lywtD~-~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~-----~~~~I~v~~~dG~~~~~l 117 (628)
T 4a0p_A 44 FDVTDNRIYWTDI-SLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADT-----GTNRIEVSKLDGQHRQVL 117 (628)
T ss_dssp EETTTTEEEEEET-TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET-----TTTEEEEEETTSTTCEEE
T ss_pred EECCCCEEEEEEC-CCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEEC-----CCCEEEEEecCCCcEEEE
Confidence 4555554444443 3667777776642 2222212235678889987665544443 356788888888643322
Q ss_pred ---CCCCEEEEEEeeC-CCceec
Q psy13461 80 ---NSPTFCQLRWRPR-PASLLS 98 (194)
Q Consensus 80 ---~~~~~~~~~wrP~-~~~Lls 98 (194)
....-..++..|. |....|
T Consensus 118 ~~~~l~~P~~iavdp~~G~lY~t 140 (628)
T 4a0p_A 118 VWKDLDSPRALALDPAEGFMYWT 140 (628)
T ss_dssp ECSSCCCEEEEEEETTTTEEEEE
T ss_pred EeCCCCCcccEEEccCCCeEEEe
Confidence 2445577788773 433333
No 325
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=49.94 E-value=1.5e+02 Score=26.90 Aligned_cols=57 Identities=14% Similarity=0.115 Sum_probs=39.1
Q ss_pred ceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEee---CCCCEEEEEEee-CCCceecc
Q psy13461 38 QATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRF---NSPTFCQLRWRP-RPASLLSK 99 (194)
Q Consensus 38 ~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~---~~~~~~~~~wrP-~~~~Lls~ 99 (194)
....+++++.|+.|.-+.+ ..+.|.+.+++|+....+ ....-..++..| +|....|.
T Consensus 390 ~p~glAvD~~~~nLY~td~-----~~~~I~v~~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD 450 (628)
T 4a0p_A 390 QPYDLSIDIYSRYIYWTCE-----ATNVINVTRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTN 450 (628)
T ss_dssp CEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCEEEEEEECTTCCEEEEEEETTTTEEEEEE
T ss_pred CcceEEeeccCCeEEEEcC-----CCCEEEEEECCCCeEEEEEeCCCCceeeEEEecCCCeEEEee
Confidence 5789999998886654443 366788888888865543 245677888888 55554443
No 326
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=48.69 E-value=33 Score=31.54 Aligned_cols=63 Identities=11% Similarity=0.100 Sum_probs=37.8
Q ss_pred ceEEEEECCCCCEEEEeecCcc------cccCCeEEEEee-cCcEEEee--C-CCCEEEEEEeeCCCceeccc
Q psy13461 38 QATDVEWDPTGRYVMSGVSLWK------TKADTGYWQWSF-QGKIIKRF--N-SPTFCQLRWRPRPASLLSKE 100 (194)
Q Consensus 38 ~vt~v~WsPdGr~lat~ss~~~------~~~D~~~~IW~~-~G~~l~~~--~-~~~~~~~~wrP~~~~Lls~~ 100 (194)
+.-.|+|||.|+++++=-.... ....|.+.+.+- +|++-+-+ + ...++.+.|+|++.+|...-
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 3467999999997665432110 011233333343 35543322 2 46799999999999987653
No 327
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=47.88 E-value=37 Score=27.62 Aligned_cols=49 Identities=10% Similarity=0.014 Sum_probs=34.4
Q ss_pred ccCCCCEEEEeecCCCCeEEEEEC--CC-------CeEEeeeccCceEEEEECCCCCEEEEe
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDT--GD-------FSVMNAAEHHQATDVEWDPTGRYVMSG 54 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~--~~-------~~~i~~~~h~~vt~v~WsPdGr~lat~ 54 (194)
|.|+|.+.++ + ||.|.-++- +. ..++....-..+..|.++|+|-..|..
T Consensus 95 fD~~G~LYav-~---dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 95 FDPNGYLYAV-S---KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp ECTTSCEEEE-E---TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred ECCCCCEEEe-C---CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 6799998888 5 698887774 21 123322222467999999999988776
No 328
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=46.10 E-value=27 Score=33.61 Aligned_cols=35 Identities=6% Similarity=-0.058 Sum_probs=28.8
Q ss_pred ceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEe
Q psy13461 38 QATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKR 78 (194)
Q Consensus 38 ~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~ 78 (194)
.+.+++..++..|+.|-+. |+.+|||++ +|+++..
T Consensus 237 ~~~~~~~~~~~~~lftl~~------D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSL------DYKLKVLDLSTNQCVET 272 (950)
T ss_dssp CEEEEEEETTTTEEEEEET------TCEEEEEETTTTEEEEE
T ss_pred eEEEEeecCCCcEEEEEEC------CCEEEEEECCCCCeEee
Confidence 5678888889889988884 999999997 5777764
No 329
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=46.01 E-value=36 Score=23.51 Aligned_cols=50 Identities=14% Similarity=0.225 Sum_probs=26.2
Q ss_pred CCEEEEeecC----CCCeEEEEECCCCe-EEeee-ccCceEEEEECCCCCEEEEee
Q psy13461 6 GTHIVLAELR----DTGSLEFVDTGDFS-VMNAA-EHHQATDVEWDPTGRYVMSGV 55 (194)
Q Consensus 6 G~~la~ag~~----~dg~l~fwD~~~~~-~i~~~-~h~~vt~v~WsPdGr~lat~s 55 (194)
|+.|.++.+. .||.+.+|+-.+.. ...+. .......+.+.+||.+++...
T Consensus 13 g~~L~sg~y~l~~q~DgNLvly~~~~~vW~ant~~~~~~~~~L~l~~dGnLvL~d~ 68 (105)
T 4h3o_A 13 GQSLDVEPYHFIMQDDCNLVLYDHSTSTWASNTEIGGKSGCSAVLQSDGNFVVYDS 68 (105)
T ss_dssp TCEEEETTEEEEECTTSCEEEEETTEEEEECCCCCTTCCSCEEEECTTSCEEEECT
T ss_pred CCEEEECCEEEEECCCCeEEEEECCEEEEEecCCCCCCccEEEEEeCCccEEEECC
Confidence 5555554332 68888888754211 01111 111223577888888776543
No 330
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=43.87 E-value=81 Score=22.13 Aligned_cols=48 Identities=13% Similarity=0.068 Sum_probs=23.8
Q ss_pred cCCCCEEEEeecCCCCeEEEEECCCCeEEeee--c-cCceEEEEECCCCCEEEEe
Q psy13461 3 CTMGTHIVLAELRDTGSLEFVDTGDFSVMNAA--E-HHQATDVEWDPTGRYVMSG 54 (194)
Q Consensus 3 SP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~--~-h~~vt~v~WsPdGr~lat~ 54 (194)
||+|.|.+.=. .||.+.+++. ...+=.. . ...-..+....||.+++..
T Consensus 27 S~~g~~~L~~~--~dgnlvly~~--~~~vW~sn~~~~~~~~~l~l~~dGNLVl~d 77 (119)
T 1b2p_A 27 FGTHVYRFIMQ--TDCNLVLYDN--NNPIWATNTGGLGNGCRAVLQPDGVLVVIT 77 (119)
T ss_dssp ETTEEEEEEEC--TTSCEEEEET--TEEEEECCCTTSCSSCEEEECTTSCEEEEC
T ss_pred CCCCCEEEEEe--cCCCEEEEEC--CEEEEeCCCccCCCceEEEEccCCEEEEEe
Confidence 55555443322 4777777664 2222111 1 1112346677788777654
No 331
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=43.27 E-value=81 Score=31.16 Aligned_cols=57 Identities=14% Similarity=0.229 Sum_probs=36.3
Q ss_pred EEEEeecCCCCeEEEEECCCCeE--Eeeec-cCceEEEEECCC------CCEEEEeecCcccccCCeEEEEeec
Q psy13461 8 HIVLAELRDTGSLEFVDTGDFSV--MNAAE-HHQATDVEWDPT------GRYVMSGVSLWKTKADTGYWQWSFQ 72 (194)
Q Consensus 8 ~la~ag~~~dg~l~fwD~~~~~~--i~~~~-h~~vt~v~WsPd------Gr~lat~ss~~~~~~D~~~~IW~~~ 72 (194)
.|++|. ++.|.++.++++.+ +...+ ...|++++++|. ++++|.|.. .|++++|+++.
T Consensus 525 ~vvva~---g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~-----~d~tv~I~sL~ 590 (1158)
T 3ei3_A 525 QVVVAV---GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLW-----TDISARILKLP 590 (1158)
T ss_dssp EEEEEE---TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEET-----TTTEEEEEETT
T ss_pred EEEEEE---CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEEC-----CCCEEEEEECC
Confidence 444443 35666666654332 22211 257999999874 478988873 38899999885
No 332
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=39.61 E-value=69 Score=29.54 Aligned_cols=65 Identities=12% Similarity=0.147 Sum_probs=40.6
Q ss_pred CceEEEEECCCCCEEE-EeecCc-----ccccCCeEEEEee-cCcEEEee--C-CCCEEEEEEeeCCCceecccc
Q psy13461 37 HQATDVEWDPTGRYVM-SGVSLW-----KTKADTGYWQWSF-QGKIIKRF--N-SPTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 37 ~~vt~v~WsPdGr~la-t~ss~~-----~~~~D~~~~IW~~-~G~~l~~~--~-~~~~~~~~wrP~~~~Lls~~~ 101 (194)
.+..+|.|+|+|.+.. |=.+.- .....+.+..++- +|++..-. + ...++.++|+|++.+|..+-+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 4578999999999776 432110 0112335555565 46543322 2 356899999999999877643
No 333
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=39.47 E-value=21 Score=34.97 Aligned_cols=35 Identities=6% Similarity=-0.050 Sum_probs=27.8
Q ss_pred ceEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEe
Q psy13461 38 QATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKR 78 (194)
Q Consensus 38 ~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~ 78 (194)
.+.+++..++..||.|-+ .|+.+||||+ +|+++..
T Consensus 239 ~~vs~~~~~~~~~lftL~------~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLS------LDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSCCEEETTTTEEEEEB------TTCEEEEEETTTTEEEEE
T ss_pred eeEEeeccCCccEEEEEe------CCCEEEEEECCCCCeEEe
Confidence 455667778888988887 4999999998 6877765
No 334
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=34.43 E-value=2.6e+02 Score=25.19 Aligned_cols=77 Identities=8% Similarity=-0.039 Sum_probs=44.5
Q ss_pred CCeEEEEECCCC--eEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEee---CCCCEEEEEEee
Q psy13461 17 TGSLEFVDTGDF--SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRF---NSPTFCQLRWRP 91 (194)
Q Consensus 17 dg~l~fwD~~~~--~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~~---~~~~~~~~~wrP 91 (194)
.+.|.-++.+.. +.+....-.....+++++.|+.|..+.+ ..+.|.+-+++|.....+ ....-..++..|
T Consensus 370 ~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~-----~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp 444 (619)
T 3s94_A 370 VRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDT-----GTDRIEVTRLNGTMRKILISEDLEEPRAIVLDP 444 (619)
T ss_dssp TTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET-----TTTEEEEEETTSCSCEEEECTTCCSEEEEEEET
T ss_pred CCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeC-----CCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEc
Confidence 455666665532 2222222245678999986665544443 367788888888744333 245667888888
Q ss_pred C-CCceec
Q psy13461 92 R-PASLLS 98 (194)
Q Consensus 92 ~-~~~Lls 98 (194)
. |....|
T Consensus 445 ~~G~ly~t 452 (619)
T 3s94_A 445 MVGYMYWT 452 (619)
T ss_dssp TTTEEEEE
T ss_pred CCCcEEEe
Confidence 5 444444
No 335
>3q2b_A Pfadf1, cofilin/actin-depolymerizing factor homolog 1; actin regulator, actin-binding protein; HET: TAR; 1.60A {Plasmodium falciparum} PDB: 2xf1_A
Probab=32.75 E-value=30 Score=24.88 Aligned_cols=52 Identities=8% Similarity=0.077 Sum_probs=36.3
Q ss_pred CeEEEEeecCcEEEeeCCCCEEEEEEeeCCCc----eecccchhHHHhhhhhhc-hhccHHhHHHH
Q psy13461 64 TGYWQWSFQGKIIKRFNSPTFCQLRWRPRPAS----LLSKEQVDKIKKSLKKYT-PAFEAKDRQRM 124 (194)
Q Consensus 64 ~~~~IW~~~G~~l~~~~~~~~~~~~wrP~~~~----Lls~~~~~~Ikknlk~ys-~~fe~~d~~~~ 124 (194)
.-|.++++ ...+.-+.|.|++.. ++=++....+++.|.-.. ++++..|..+-
T Consensus 64 prY~vy~~---------~~k~vfI~w~Pd~a~vk~KMlYASsk~~l~~~l~g~~~~~i~a~d~~dl 120 (124)
T 3q2b_A 64 CAYVVFDA---------VSKIHFFMYARESSNSRDRMTYASSKQAILKKIEGVNVLTSVIESAQDV 120 (124)
T ss_dssp EEEEEEEC---------SSCEEEEEEECTTSCHHHHHHHHHHHHHHHTTSTTSEECCSCBCSHHHH
T ss_pred cEEEEEec---------CCCEEEEEECCCCCChhHhhhhHHHHHHHHHHhCCCceEEEEecCHHHc
Confidence 46778887 467888999999754 344455667888877665 57777776553
No 336
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=32.72 E-value=57 Score=28.68 Aligned_cols=56 Identities=14% Similarity=0.135 Sum_probs=35.8
Q ss_pred ceEEEEECCCC--CEEEEeecCcccccCCeEEEEeecCcEE----EeeC-----------CCCEEEEEEeeC----CCce
Q psy13461 38 QATDVEWDPTG--RYVMSGVSLWKTKADTGYWQWSFQGKII----KRFN-----------SPTFCQLRWRPR----PASL 96 (194)
Q Consensus 38 ~vt~v~WsPdG--r~lat~ss~~~~~~D~~~~IW~~~G~~l----~~~~-----------~~~~~~~~wrP~----~~~L 96 (194)
.-..++|.||| |+++|-. .+.|++++-.|... ..++ ...+..|+++|+ +...
T Consensus 15 ~P~~~a~~pdG~~rl~V~er-------~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lY 87 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEK-------EGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLY 87 (463)
T ss_dssp SEEEEECCSSSSCCEEEEET-------TTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEE
T ss_pred CceEEEECCCCCeEEEEEeC-------CceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEE
Confidence 45789999999 4777654 56788887666431 1111 235788999986 4445
Q ss_pred eccc
Q psy13461 97 LSKE 100 (194)
Q Consensus 97 ls~~ 100 (194)
++.+
T Consensus 88 v~yt 91 (463)
T 2wg3_C 88 VSYT 91 (463)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5443
No 337
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=31.22 E-value=1.5e+02 Score=27.54 Aligned_cols=93 Identities=6% Similarity=-0.038 Sum_probs=48.5
Q ss_pred ccCCCCEEEEee-cC-CC-CeEEEEECCCCeEEeeeccCce----------EEEEECCCCCEEEEeecCccc----ccCC
Q psy13461 2 KCTMGTHIVLAE-LR-DT-GSLEFVDTGDFSVMNAAEHHQA----------TDVEWDPTGRYVMSGVSLWKT----KADT 64 (194)
Q Consensus 2 fSP~G~~la~ag-~~-~d-g~l~fwD~~~~~~i~~~~h~~v----------t~v~WsPdGr~lat~ss~~~~----~~D~ 64 (194)
+||+|++++.+= -| .| ..++++|+.+++.+.-+=...+ +.++|-++..++.+..-.+.. .-..
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~~ 216 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYPN 216 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSBC
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCCC
Confidence 899999888762 11 23 4699999999887642101112 445887544444432110100 1123
Q ss_pred eEEEEee-----cCcEEEeeCCCCEE-EEEEeeCCC
Q psy13461 65 GYWQWSF-----QGKIIKRFNSPTFC-QLRWRPRPA 94 (194)
Q Consensus 65 ~~~IW~~-----~G~~l~~~~~~~~~-~~~wrP~~~ 94 (194)
.++.|.. +-.+++.-..+.++ ...-.+++.
T Consensus 217 ~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~ 252 (711)
T 4hvt_A 217 SLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDT 252 (711)
T ss_dssp EEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTT
T ss_pred EEEEEECCCChHHCeEEeccCCCceEEEEEEecCCC
Confidence 5677755 24466665543332 333344554
No 338
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=30.23 E-value=43 Score=27.08 Aligned_cols=59 Identities=12% Similarity=-0.061 Sum_probs=27.1
Q ss_pred eEEEEECCCC--eEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEE
Q psy13461 19 SLEFVDTGDF--SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 77 (194)
Q Consensus 19 ~l~fwD~~~~--~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~ 77 (194)
.+.+||..+. +.+.........+.+...+|+.++.|+.......-+.+.+.++.++.+.
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVT 346 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCE
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeE
Confidence 5788887753 3333322211111222346777777775322111234556677544333
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=28.68 E-value=2.2e+02 Score=26.00 Aligned_cols=71 Identities=8% Similarity=0.196 Sum_probs=41.8
Q ss_pred CCCCEEEEeecCCCCeEEEEECCCCe--EEee---e--ccCceEEEEECCC-CCEEEEeecCccc-ccCCeEEEEeecCc
Q psy13461 4 TMGTHIVLAELRDTGSLEFVDTGDFS--VMNA---A--EHHQATDVEWDPT-GRYVMSGVSLWKT-KADTGYWQWSFQGK 74 (194)
Q Consensus 4 P~G~~la~ag~~~dg~l~fwD~~~~~--~i~~---~--~h~~vt~v~WsPd-Gr~lat~ss~~~~-~~D~~~~IW~~~G~ 74 (194)
++|+++|.||...++.+..||..+.+ .+.. . .......+.++.+ |+.++.|+..... ..-+.+.+||....
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 47888888886422389999988643 2221 1 1123344666766 7777777742111 22356888888543
No 340
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=27.80 E-value=2.6e+02 Score=23.72 Aligned_cols=66 Identities=8% Similarity=0.090 Sum_probs=40.2
Q ss_pred CEEEEeecCCCC--eEEEEECCCCeEEeee------cc--Cce-EEEEECCCCCEEEEeecCcccccCCeEEEEeecCcE
Q psy13461 7 THIVLAELRDTG--SLEFVDTGDFSVMNAA------EH--HQA-TDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKI 75 (194)
Q Consensus 7 ~~la~ag~~~dg--~l~fwD~~~~~~i~~~------~h--~~v-t~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~ 75 (194)
.+|+.=.. ... .|.++|+++++++... ++ +.+ .++........++++-. ..++.+.|.+|+.
T Consensus 40 ~yL~~~N~-~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~------~~~i~l~n~~G~~ 112 (369)
T 3s9j_A 40 EYLHFENT-QKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNN------ISRLSSINSQGEI 112 (369)
T ss_dssp EEEEEEEC-STTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGG------GTEEEEECTTCCE
T ss_pred EEEEEeCC-CCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCC------cceEEEECCCceE
Confidence 34444332 456 9999999999887542 11 123 23434455555555432 4467778889998
Q ss_pred EEee
Q psy13461 76 IKRF 79 (194)
Q Consensus 76 l~~~ 79 (194)
+.+.
T Consensus 113 ~~k~ 116 (369)
T 3s9j_A 113 IRNY 116 (369)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8875
No 341
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=27.68 E-value=95 Score=21.40 Aligned_cols=39 Identities=8% Similarity=0.000 Sum_probs=18.8
Q ss_pred CCCeEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEe
Q psy13461 16 DTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSG 54 (194)
Q Consensus 16 ~dg~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~ 54 (194)
.||.|.+++....-...+.....-..+.+..||.+++..
T Consensus 32 ~dGnLvl~~~~~vW~snt~~~~~~~~l~l~~dGNLvl~d 70 (110)
T 3r0e_B 32 GDCNLVLYGGKYGWQSNTHGNGEHCFLRLNHKGELIIKD 70 (110)
T ss_dssp TTSCEEEECSSSCEECCCTTSSSSCEEEECTTSCEEEEC
T ss_pred CCCeEEEECCeEEEECCCcCCCcCEEEEEeCCCcEEEEe
Confidence 466676665421111111111112356778888877654
No 342
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=26.39 E-value=89 Score=29.53 Aligned_cols=33 Identities=12% Similarity=0.276 Sum_probs=23.9
Q ss_pred eEEEEECCCCCEEEEeecCcccccCCeEEEEee-cCcEEEee
Q psy13461 39 ATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKRF 79 (194)
Q Consensus 39 vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~-~G~~l~~~ 79 (194)
|+++..+ ..||+|-+ .|+.+||||+ +|+++...
T Consensus 224 Is~~~~~--~~fLftL~------~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 224 ISCKLFH--ERYLIVLT------QNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EEEEEET--TTEEEEEE------TTCEEEEEETTTTEEEEEE
T ss_pred EEEeccC--CcEEEEEE------cCCeEEEEEcCCCceEEee
Confidence 5544443 67888877 4999999999 47777654
No 343
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=24.97 E-value=2.4e+02 Score=21.83 Aligned_cols=95 Identities=7% Similarity=-0.093 Sum_probs=47.8
Q ss_pred CCCEEEEeecC--CCCeEEEEECCCCe--EEeeecc--CceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEEe
Q psy13461 5 MGTHIVLAELR--DTGSLEFVDTGDFS--VMNAAEH--HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKR 78 (194)
Q Consensus 5 ~G~~la~ag~~--~dg~l~fwD~~~~~--~i~~~~h--~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~~ 78 (194)
+|+.++.||.. .-..+..||..+.+ .+..... .....+.. +|+.++.|+.......-+.+.+||.....-..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 56667777742 22578889987644 2222221 11222223 67777777743122234568888886544333
Q ss_pred e---CCCCEEEEEEeeCCCceecccc
Q psy13461 79 F---NSPTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 79 ~---~~~~~~~~~wrP~~~~Lls~~~ 101 (194)
. +..+..+-+-.-++..++.++.
T Consensus 133 ~~~~p~~r~~~~~~~~~~~iyv~GG~ 158 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEANGLIYVCGGS 158 (306)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCE
T ss_pred CCCCcCCcceeEEEEECCEEEEECCC
Confidence 3 2222222222235555555553
No 344
>2ldu_A Heat shock factor protein 1; structural genomics, northeast structural genomics consortiu DNA-binding, PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=24.39 E-value=40 Score=24.47 Aligned_cols=15 Identities=20% Similarity=0.403 Sum_probs=11.5
Q ss_pred EEEEECCCCCEEEEe
Q psy13461 40 TDVEWDPTGRYVMSG 54 (194)
Q Consensus 40 t~v~WsPdGr~lat~ 54 (194)
.-|.|+|+|+-++..
T Consensus 35 ~iI~W~~~G~sFvV~ 49 (125)
T 2ldu_A 35 ALICWSPSGNSFHVF 49 (125)
T ss_dssp TTEEECTTSSEEEEC
T ss_pred CEEEEcCCCCEEEEe
Confidence 348899999977654
No 345
>2e4m_C HA-17; botulinum toxin, hemagglutinin subcomponent complex; 1.85A {Clostridium botulinum}
Probab=24.30 E-value=2.1e+02 Score=20.98 Aligned_cols=84 Identities=15% Similarity=0.271 Sum_probs=46.6
Q ss_pred ccCCCCEEEEeecC-------CCCeEEEEECCC-----CeEEeeec---------cCceEEEEECCCCCEEEEeecCccc
Q psy13461 2 KCTMGTHIVLAELR-------DTGSLEFVDTGD-----FSVMNAAE---------HHQATDVEWDPTGRYVMSGVSLWKT 60 (194)
Q Consensus 2 fSP~G~~la~ag~~-------~dg~l~fwD~~~-----~~~i~~~~---------h~~vt~v~WsPdGr~lat~ss~~~~ 60 (194)
|=|+|.|=+.+=|. .+|.|.||+..+ .++..... ...-..++|+--|-.++++++
T Consensus 7 flp~GnY~IkSifs~SlyL~~~sg~ltf~~~ssanNQKWkl~Y~s~k~~ykisNiA~pnkyLaynd~~fI~l~S~s---- 82 (146)
T 2e4m_C 7 FLPNGNYKIKSLFSDSLYLTYSSGSLSFLNTSSLDNQKWKLEYISSSNGFRFSNVAEPNKYLAYNDYGFIYLSSSS---- 82 (146)
T ss_dssp CCCSEEEEEEESSCSSEEEEECSSCEEEEECCSSGGGCEEEEECSTTCSEEEEETTEEEEEEEECTTSBEEEESCS----
T ss_pred ecCCCcEEEEEEecCcEEecccCCeEEEeccCCcCcceeEEEEeecCCeEEeeecCCCceEEEEcccCcEEEEcCC----
Confidence 67888875544221 589999999763 22322211 123456799988855555554
Q ss_pred ccCCeEEEE-ee-cCc-EEEeeCCCCEEEEEEee
Q psy13461 61 KADTGYWQW-SF-QGK-IIKRFNSPTFCQLRWRP 91 (194)
Q Consensus 61 ~~D~~~~IW-~~-~G~-~l~~~~~~~~~~~~wrP 91 (194)
++.|++= .. .|. .+..+..-.....+|.-
T Consensus 83 --nk~yW~P~kia~n~Yii~nl~~v~~~d~aw~i 114 (146)
T 2e4m_C 83 --NNSLWNPIKIAINSYIICTLSIVNVTDYAWTI 114 (146)
T ss_dssp --SCCCEEEEEEETTEEEEEECCCSSSCEEEEEE
T ss_pred --CcceEEEEEecCcEEEEEEccccccceeeeEE
Confidence 4443331 11 233 33445555666777753
No 346
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=23.77 E-value=3e+02 Score=23.70 Aligned_cols=61 Identities=11% Similarity=0.123 Sum_probs=0.0
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 77 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~ 77 (194)
.|+.=..|-+-+ .-|-|.+||+.++.++.... .|++--|+++..+ ..+|+..=+-.|+.+.
T Consensus 267 vs~kygviyviT--K~G~ihlyDleTgt~i~~nr--------IS~d~iF~ta~~~-----~~~Gi~~Vnr~GqVl~ 327 (365)
T 2xzh_A 267 ISEKHDVVFLIT--KYGYIHLYDLETGTCIYMNR--------ISGETIFVTAPHE-----ATAGIIGVNRKGQVLS 327 (365)
T ss_dssp EETTTTEEEEEE--TTSEEEEEETTTCCEEEEEE--------CCSSCEEEEEEEG-----GGTEEEEEETTCEEEE
T ss_pred ecccCCEEEEEe--CCcEEEEEEcccCcEEEEec--------cCCCceEEecccC-----CCCcEEEEcCCCEEEE
No 347
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=23.11 E-value=1.2e+02 Score=20.90 Aligned_cols=40 Identities=8% Similarity=0.045 Sum_probs=19.8
Q ss_pred CCCeEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEee
Q psy13461 16 DTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGV 55 (194)
Q Consensus 16 ~dg~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~s 55 (194)
.||.|.+++....-...+.....-..+.+..||.+++-..
T Consensus 28 ~dGnLvl~~~~~vW~snt~~~~~~~~l~l~~dGNLVl~~~ 67 (111)
T 3mez_A 28 GDCNLVLYNEAGGFQSNTHGRGVDCTLRLNNRGQLEIHSA 67 (111)
T ss_dssp TTSCEEEECSSCCEECCCTTSCSSCEEEECTTSCEEEECS
T ss_pred cCCeEEEECCCCEEECCcccCCcCEEEEEcCCCcEEEEeC
Confidence 4666666664431011111111123567888888877543
No 348
>2lll_A Lamin-B2; immunoglobulin-like fold, structural protein, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=21.92 E-value=2.4e+02 Score=20.71 Aligned_cols=18 Identities=6% Similarity=0.027 Sum_probs=13.9
Q ss_pred CCCEEEEEEeeCCCceec
Q psy13461 81 SPTFCQLRWRPRPASLLS 98 (194)
Q Consensus 81 ~~~~~~~~wrP~~~~Lls 98 (194)
...+..++..|.|.-+++
T Consensus 107 G~~~~T~L~n~~GEevAt 124 (139)
T 2lll_A 107 GESFRTVLVNADGEEVAM 124 (139)
T ss_dssp CSEEEEEEECTTSCEEEE
T ss_pred CCCEEEEEECCCCCEEEE
Confidence 455778888888887777
No 349
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=20.85 E-value=2.9e+02 Score=21.23 Aligned_cols=94 Identities=10% Similarity=-0.103 Sum_probs=48.5
Q ss_pred CCCEEEEeecC---CCCeEEEEECCCCeE--Eeeecc--CceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEE
Q psy13461 5 MGTHIVLAELR---DTGSLEFVDTGDFSV--MNAAEH--HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 77 (194)
Q Consensus 5 ~G~~la~ag~~---~dg~l~fwD~~~~~~--i~~~~h--~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~ 77 (194)
+|++++.||.. ....+..||..+.+- +..... .....+.. +|+.++.|+.... ..-+.+.+||.....-.
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~-~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGT-AHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSS-SBCCCEEEEETTTTEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCC-cccceEEEEeCCCCcEE
Confidence 56777777743 135688999876442 222221 12233333 6777777764211 11356888888644333
Q ss_pred ee---CCCCEEEEEEeeCCCceecccc
Q psy13461 78 RF---NSPTFCQLRWRPRPASLLSKEQ 101 (194)
Q Consensus 78 ~~---~~~~~~~~~wrP~~~~Lls~~~ 101 (194)
.. +..+...-+..-++..++.++.
T Consensus 236 ~~~~~p~~r~~~~~~~~~~~i~v~GG~ 262 (301)
T 2vpj_A 236 TVTSMTTPRCYVGATVLRGRLYAIAGY 262 (301)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCB
T ss_pred ECCCCCCcccceeEEEECCEEEEEcCc
Confidence 33 2333322233336666666654
No 350
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=20.29 E-value=4e+02 Score=23.90 Aligned_cols=61 Identities=11% Similarity=0.123 Sum_probs=0.0
Q ss_pred ccCCCCEEEEeecCCCCeEEEEECCCCeEEeeeccCceEEEEECCCCCEEEEeecCcccccCCeEEEEeecCcEEE
Q psy13461 2 KCTMGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 77 (194)
Q Consensus 2 fSP~G~~la~ag~~~dg~l~fwD~~~~~~i~~~~h~~vt~v~WsPdGr~lat~ss~~~~~~D~~~~IW~~~G~~l~ 77 (194)
.||.=..|-+-+ .-|-|.+||+.++.++.... .|++--|+++..+ ..+|+..=+-.|+.+.
T Consensus 266 vs~kygviyviT--K~G~i~lyDleTgt~i~~nr--------Is~~~iF~t~~~~-----~~~Gi~~Vnr~GqVl~ 326 (494)
T 1bpo_A 266 ISEKHDVVFLIT--KYGYIHLYDLETGTCIYMNR--------ISGETIFVTAPHE-----ATAGIIGVNRKGQVLS 326 (494)
T ss_dssp EETTTTEEEEEE--TTSEEEEEETTTCCEEEEEE--------CCSSCEEEEEEET-----TTTEEEEEETTCEEEE
T ss_pred ecccCCEEEEEe--cCceEEEEecccceeeeeec--------ccCCceEEecccC-----CCCcEEEEccCceEEE
Done!