BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13464
(515 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|195334811|ref|XP_002034070.1| GM21666 [Drosophila sechellia]
gi|194126040|gb|EDW48083.1| GM21666 [Drosophila sechellia]
Length = 741
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 167/468 (35%), Positives = 237/468 (50%), Gaps = 105/468 (22%)
Query: 20 PKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P D +K++N +T+ K F+ + N++ WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PAWQAPEAVDRPKLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLPLIFKILHQKV 136
I+RRIL YF + + ++TDIDDKII +A N L E+Y A++ LPL + QK
Sbjct: 67 ILRRILSDYFGYNIHYVMNITDIDDKIIRRARQNHLFEEYAAEAQK--LPLDELLGQQK- 123
Query: 137 VGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAK 196
+ R C D ++I+ DK + + N A
Sbjct: 124 --EVLQRFQDTCAKNTDPDKKIML-----------------DKTLQRMND--------AV 156
Query: 197 RYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATW 256
+ + K +++ K + L +AK P+ D + G QI D
Sbjct: 157 EALTKAVGKGDEREISEKRLLYLNEAK---DPISDWLDSLK------GAQIND------- 200
Query: 257 QFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVL 316
+ VF +LP Y +E ++ M+ +L
Sbjct: 201 ---------NAVFEALPRY--------------------------WEDQFHNDMKSLNIL 225
Query: 317 PPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL----WG 367
PP TRVSE++P I +FIQ ++D AY +++SVYFDV+ F HY KL +G
Sbjct: 226 PPDVLTRVSEYVPQIVTFIQKIIDNGLAY-AANNSVYFDVNGFDKREKHHYAKLVPEAYG 284
Query: 368 RNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
+++ + + KRS DFALWK++K GEPW++S WGKGRPGWHIECSAMA
Sbjct: 285 DTKSLQEGEGDLSVAEDRLSEKRSANDFALWKASKAGEPWWDSPWGKGRPGWHIECSAMA 344
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
S FG D+HTGG+DLKFPHH+NE AQS A N+S+WV Y+LHTGHL
Sbjct: 345 SDIFGSTFDIHTGGVDLKFPHHDNELAQSEAAFNESEWVKYFLHTGHL 392
>gi|195583830|ref|XP_002081719.1| GD11166 [Drosophila simulans]
gi|194193728|gb|EDX07304.1| GD11166 [Drosophila simulans]
Length = 741
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 167/468 (35%), Positives = 237/468 (50%), Gaps = 105/468 (22%)
Query: 20 PKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P D +K++N +T+ K F+ + N++ WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PAWQAPEAVDRPKLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLPLIFKILHQKV 136
I+RRIL YF + + ++TDIDDKII +A N L E+Y A++ LPL + QK
Sbjct: 67 ILRRILSDYFGYNIHYVMNITDIDDKIIRRARQNHLFEEYAAEAQK--LPLDELLGQQK- 123
Query: 137 VGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAK 196
+ R C D ++I+ DK + + N A
Sbjct: 124 --EVLQRFQDTCAKNTDPDKKIML-----------------DKTLQRMND--------AV 156
Query: 197 RYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATW 256
+ + K +++ K + L +AK P+ D + G QI D
Sbjct: 157 EALTKAVGKGDEREISEKRLLYLNEAK---DPISDWLDSLK------GAQIND------- 200
Query: 257 QFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVL 316
+ VF +LP Y +E ++ M+ +L
Sbjct: 201 ---------NAVFEALPRY--------------------------WEDQFHNDMKSLNIL 225
Query: 317 PPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL----WG 367
PP TRVSE++P I +FIQ ++D AY +++SVYFDV+ F HY KL +G
Sbjct: 226 PPDVLTRVSEYVPQIVTFIQKIIDNGLAY-AANNSVYFDVNGFDKREKHHYAKLVPEAYG 284
Query: 368 RNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
+++ + + KRS DFALWK++K GEPW++S WGKGRPGWHIECSAMA
Sbjct: 285 DTKSLQEGEGDLSAAEDRLSEKRSANDFALWKASKAGEPWWDSPWGKGRPGWHIECSAMA 344
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
S FG D+HTGG+DLKFPHH+NE AQS A N+S+WV Y+LHTGHL
Sbjct: 345 SDIFGPTFDIHTGGVDLKFPHHDNELAQSEAAFNESEWVKYFLHTGHL 392
>gi|195028283|ref|XP_001987006.1| GH21680 [Drosophila grimshawi]
gi|193903006|gb|EDW01873.1| GH21680 [Drosophila grimshawi]
Length = 743
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 162/467 (34%), Positives = 238/467 (50%), Gaps = 102/467 (21%)
Query: 20 PKWSLPSGYDT--GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
P W P T +++YN +T+ K F+ N++KWY+CGPTVYD+ H+GHA +
Sbjct: 7 PAWQAPKPISTRPQLRLYNSLTRQKETFVPLEGNNVKWYSCGPTVYDASHMGHARSYISF 66
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVV 137
DI+RRIL +YF + + ++TDIDDKII +A Y+ AK L + + L+++
Sbjct: 67 DILRRILANYFGYNIQYVMNITDIDDKIIKRARQYHL-YEQYAKEVTLLPLEQFLNEQ-- 123
Query: 138 GSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKR 197
+ T+ C+ D ++++ ++ + D + + +S ED T ++
Sbjct: 124 KEVLTQLQVKCDKNTDADKKVMLEK------MLQRMNDAMEALTKAVSSKDEDQITKMRQ 177
Query: 198 YFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQ 257
+ L +AK P+ D + G Q+KD
Sbjct: 178 NY-------------------LAEAK---DPIAEWLDGRK------GAQVKD-------- 201
Query: 258 FKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLP 317
+ VF +LP Y +E ++ M+ +LP
Sbjct: 202 --------NSVFEALPRY--------------------------WEDKFHNDMKSLNILP 227
Query: 318 PTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL----WGR 368
P TRVSE++P I FIQ ++D K AY ++ SVYFDV+ F HY KL +G
Sbjct: 228 PDVLTRVSEYVPQIVEFIQRIIDNKLAY-EANGSVYFDVNGFDKREKHHYAKLVPEAYGD 286
Query: 369 NENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
+++ + + KRSP DFALWK++K GEPW++S WG+GRPGWHIECSAMAS
Sbjct: 287 TQSLQEGEGDLSVTEERLSEKRSPNDFALWKTSKAGEPWWDSPWGRGRPGWHIECSAMAS 346
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG D+HTGG+DLKFPHH+NE AQS A N+S+WV Y+LHTGHL
Sbjct: 347 DIFGSTFDIHTGGVDLKFPHHDNELAQSEAAFNESEWVKYFLHTGHL 393
>gi|19922364|ref|NP_611087.1| Cysteinyl-tRNA synthetase [Drosophila melanogaster]
gi|122087256|sp|Q7KN90.1|SYCC_DROME RecName: Full=Cysteine--tRNA ligase, cytoplasmic; AltName:
Full=Cysteinyl-tRNA synthetase; Short=CysRS
gi|4972706|gb|AAD34748.1| unknown [Drosophila melanogaster]
gi|7302987|gb|AAF58057.1| Cysteinyl-tRNA synthetase [Drosophila melanogaster]
gi|220943686|gb|ACL84386.1| Aats-cys-PA [synthetic construct]
Length = 741
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 166/468 (35%), Positives = 237/468 (50%), Gaps = 105/468 (22%)
Query: 20 PKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P D +K++N +T+ K F+ + N++ WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PAWQAPEAVDRPKLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLPLIFKILHQKV 136
I+RRIL YF + + ++TDIDDKII +A N L ++Y A++ LPL + QK
Sbjct: 67 ILRRILSDYFGYNIHYVMNITDIDDKIIRRARQNHLFDEYAAEAQK--LPLDELLGQQK- 123
Query: 137 VGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAK 196
+ R C D ++I+ DK + + N A
Sbjct: 124 --EVLQRFQDTCAKNTDPDKKIML-----------------DKTLQRMND--------AV 156
Query: 197 RYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATW 256
+ + K +++ K + L +AK P+ D + G QI D
Sbjct: 157 EALTKAVGKGDEREISEKRLLYLNEAK---DPISDWLDSLK------GAQIND------- 200
Query: 257 QFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVL 316
+ VF +LP Y +E ++ M+ +L
Sbjct: 201 ---------NAVFEALPRY--------------------------WEDQFHNDMKSLNIL 225
Query: 317 PPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL----WG 367
PP TRVSE++P I +FIQ ++D AY +++SVYFDV+ F HY KL +G
Sbjct: 226 PPDVLTRVSEYVPQIVTFIQKIIDNGLAY-AANNSVYFDVNGFDKREKHHYAKLVPEAYG 284
Query: 368 RNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
+++ + + KRS DFALWK++K GEPW++S WGKGRPGWHIECSAMA
Sbjct: 285 DTKSLQEGEGDLSIAEDRLSEKRSANDFALWKASKAGEPWWDSPWGKGRPGWHIECSAMA 344
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
S FG D+HTGG+DLKFPHH+NE AQS A N+S+WV Y+LHTGHL
Sbjct: 345 SDIFGPTFDIHTGGVDLKFPHHDNELAQSEAAFNESEWVKYFLHTGHL 392
>gi|195488337|ref|XP_002092271.1| GE11760 [Drosophila yakuba]
gi|194178372|gb|EDW91983.1| GE11760 [Drosophila yakuba]
Length = 741
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 167/468 (35%), Positives = 236/468 (50%), Gaps = 105/468 (22%)
Query: 20 PKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P D +K++N +T+ K F+ + N++ WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PAWQAPKAADRPKLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLPLIFKILHQKV 136
I+RRIL YF + + ++TDIDDKII +A N L E Y A++ LPL + QK
Sbjct: 67 ILRRILSDYFGYNIHYVMNITDIDDKIIRRARQNHLFEAYAAEAQK--LPLDELLGQQK- 123
Query: 137 VGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAK 196
+ R C D ++I+ DK + + N A
Sbjct: 124 --EVLQRFQDTCAKNTDPDKKIML-----------------DKTLQRMND--------AV 156
Query: 197 RYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATW 256
+ + K + ++ K + L +AK P+ D + G QI D
Sbjct: 157 EALTKAVGKGVDPEISEKRLLYLNEAK---DPISDWLDSLK------GAQIND------- 200
Query: 257 QFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVL 316
+ VF +LP Y +E ++ M+ +L
Sbjct: 201 ---------NAVFEALPRY--------------------------WEDQFHNDMKSLNIL 225
Query: 317 PPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL----WG 367
PP TRVSE++P I +FIQ ++D AY +++SVYFDV+ F HY KL +G
Sbjct: 226 PPDVLTRVSEYVPQIVTFIQKIIDNGLAY-AANNSVYFDVNGFDKRDKHHYAKLVPEAYG 284
Query: 368 RNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
+++ + + KRS DFALWK++K GEPW++S WGKGRPGWHIECSAMA
Sbjct: 285 DTKSLQEGEGDLSVAEDRLSEKRSANDFALWKASKAGEPWWDSPWGKGRPGWHIECSAMA 344
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
S FG D+HTGG+DLKFPHH+NE AQS A N+S+WV Y+LHTGHL
Sbjct: 345 SDIFGPTFDIHTGGVDLKFPHHDNELAQSEAAFNESEWVKYFLHTGHL 392
>gi|194755026|ref|XP_001959793.1| GF11862 [Drosophila ananassae]
gi|190621091|gb|EDV36615.1| GF11862 [Drosophila ananassae]
Length = 741
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 168/468 (35%), Positives = 238/468 (50%), Gaps = 105/468 (22%)
Query: 20 PKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P + +K++N +T+ K F+ + N++ WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PAWQAPKAAERPKLKLFNSLTRQKEEFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLPLIFKILHQKV 136
I+RRIL +YF H + ++TDIDDKII +A N L E Y + A + LPL + QK
Sbjct: 67 ILRRILANYFGYHIHYVMNITDIDDKIIKRARQNHLFEQYASEAGK--LPLEQLLGQQK- 123
Query: 137 VGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAK 196
+ R A C D ++I+ +D ++ ++++ K V+K
Sbjct: 124 --EVLQRFEATCAKNTDPDKKIM----------------LDKTLLRMNDAVEALTKAVSK 165
Query: 197 RYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATW 256
+ K LH L +AK P+ D + G I D
Sbjct: 166 GDEKEISEKRLHY---------LNEAK---DPIADWLDAQK------GAGIND------- 200
Query: 257 QFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVL 316
+ VF +LP Y +E ++ M+ +L
Sbjct: 201 ---------NAVFEALPQY--------------------------WEDQFHNDMKSLNIL 225
Query: 317 PPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL----WG 367
PP TRVSE++P I +FIQ ++D AY ++ SVYFDV+ F HY KL +G
Sbjct: 226 PPDVLTRVSEYVPQIITFIQKIIDNGLAY-AANSSVYFDVNGFDKREKHHYAKLVPEAYG 284
Query: 368 RNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
+++ + + KRS DFALWK++K GEPW++S WGKGRPGWHIECSAMA
Sbjct: 285 DTKSLQEGEGDLSVAEDRLSEKRSANDFALWKASKAGEPWWDSPWGKGRPGWHIECSAMA 344
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
S FG D+HTGG+DLKFPHH+NE AQS A N+S+WV Y+LHTGHL
Sbjct: 345 SDIFGSTFDIHTGGVDLKFPHHDNELAQSEAAFNESEWVKYFLHTGHL 392
>gi|194882631|ref|XP_001975414.1| GG20575 [Drosophila erecta]
gi|190658601|gb|EDV55814.1| GG20575 [Drosophila erecta]
Length = 741
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 166/468 (35%), Positives = 234/468 (50%), Gaps = 105/468 (22%)
Query: 20 PKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P D +K++N +T+ K F+ + N++ WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PAWQAPKAADRPKLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLPLIFKILHQKV 136
I+RRIL YF + + ++TDIDDKII +A N L E Y A++ LPL + QK
Sbjct: 67 ILRRILSDYFGYNIHYVMNITDIDDKIIRRARQNHLFEAYAVEAEK--LPLDELLGQQK- 123
Query: 137 VGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAK 196
+ R C D ++I+ DK + + N A
Sbjct: 124 --EVLQRFQDTCAKNTDPDKKIML-----------------DKTLQRMND--------AV 156
Query: 197 RYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATW 256
+ + K + K + L +AK P+ D + G QI D
Sbjct: 157 EALTKAVGKGEEHDISEKRLLYLNEAK---DPISDWLDSLK------GAQIND------- 200
Query: 257 QFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVL 316
+ VF +LP Y +E ++ M+ +L
Sbjct: 201 ---------NAVFEALPRY--------------------------WEDQFHNDMKSLNIL 225
Query: 317 PPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL----WG 367
PP TRVSE++P I +FIQ ++D AY +++SVYFDV+ F HY KL +G
Sbjct: 226 PPDVLTRVSEYVPQIVTFIQKIIDNGLAY-AANNSVYFDVNGFDKREKHHYAKLVPEAYG 284
Query: 368 RNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
+++ + + KRS DFALWK++K GEPW++S WGKGRPGWHIECSAMA
Sbjct: 285 DTKSLQEGEGDLSVAEDRLSEKRSANDFALWKASKAGEPWWDSPWGKGRPGWHIECSAMA 344
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
S FG D+HTGG+DLKFPHH+NE AQS A N+++WV Y+LHTGHL
Sbjct: 345 SDIFGPTFDIHTGGVDLKFPHHDNELAQSEAAFNEAEWVKYFLHTGHL 392
>gi|195431327|ref|XP_002063694.1| GK15775 [Drosophila willistoni]
gi|194159779|gb|EDW74680.1| GK15775 [Drosophila willistoni]
Length = 741
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 165/468 (35%), Positives = 235/468 (50%), Gaps = 105/468 (22%)
Query: 20 PKWSLPSGYDTG-IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P D ++++N +T+ K F+ N + WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PAWEAPKVTDRAKLRLFNSLTRQKEEFVPLQGNTVTWYSCGPTVYDASHMGHARSYISFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLPLIFKILHQKV 136
I+RRIL +YF + + ++TDIDDKII +A N L +Y A + LPL + QK
Sbjct: 67 ILRRILSNYFGYNIHYVMNITDIDDKIIKRARQNHLFNEYAQEAAK--LPLDQLLTEQKE 124
Query: 137 VGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAK 196
V ++ A C D ++I+ DK + + N A
Sbjct: 125 VLNL---FQATCAKNTDPDKKIML-----------------DKTLQRMND--------AV 156
Query: 197 RYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATW 256
+ + + + V K L +AK P+ D+ + G QI D
Sbjct: 157 EALTKAVSQGQAEIVSEKRTNYLNEAK---DPISEWLDKQK------GAQIND------- 200
Query: 257 QFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVL 316
+ VF +LP Y +E ++ M+ +L
Sbjct: 201 ---------NSVFEALPQY--------------------------WEDQFHNDMKSLNIL 225
Query: 317 PPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL----WG 367
PP TRVSE++P I +FIQ ++D AY ++ SVYFDV+ F HY KL +G
Sbjct: 226 PPDVLTRVSEYVPQIVAFIQRIIDNGLAY-AANSSVYFDVNGFDKREKHHYAKLVPEAYG 284
Query: 368 RNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
+++ + + KRS DFALWK++K GEPW++S WG+GRPGWHIECSAMA
Sbjct: 285 DTKSLQEGEGDLSIAEDRLSEKRSANDFALWKASKAGEPWWDSPWGRGRPGWHIECSAMA 344
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
S FG Q D+HTGG+DLKFPHH+NE AQS A N+++WV Y+LHTGHL
Sbjct: 345 SDVFGSQFDIHTGGVDLKFPHHDNELAQSEAAFNEAEWVKYFLHTGHL 392
>gi|357627589|gb|EHJ77242.1| cysteinyl-tRNA synthetase [Danaus plexippus]
Length = 740
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 172/471 (36%), Positives = 241/471 (51%), Gaps = 115/471 (24%)
Query: 20 PKWSLPSGYDTG--IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
P WSLPSG + + +YN +T+ K F+ + N + WY+CGPTVYD+ H+GHA +
Sbjct: 7 PPWSLPSGEEKRPVLNLYNSLTRQKEEFVCGHGNRVNWYSCGPTVYDASHMGHARSYISF 66
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLPLIFKILHQK 135
DI+RR+L YF + ++TDIDDKII +A N L E+Y + K
Sbjct: 67 DILRRVLTTYFGYDVLYAMNITDIDDKIIKRARQNYLYENY--------------VKDTK 112
Query: 136 VVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVA 195
+ I AV + I+R D +D +K N+L++ +VA
Sbjct: 113 TLDQIVDDATAVIDFYEGIVR------------------DANDP--DKKNTLQKMLDSVA 152
Query: 196 KRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLA-----LGVQIKDQ 250
V+ L L+++K D K +E + +LL + V + D+
Sbjct: 153 --------------SAVKTLKSALQESKSD------KIEEAKSDLLKSAKDPISVWL-DE 191
Query: 251 KCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESM 310
K AT V + +F +LP Y +E E+ + M
Sbjct: 192 KYGAT-------VTENGIFQTLPRY--------------------------WENEFHKDM 218
Query: 311 EKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF----PHYF--- 363
+ VLPP TRVSE+IP I +FIQ ++D AY S+ SVYF+V F HY+
Sbjct: 219 KALNVLPPDVLTRVSEYIPQIITFIQRIIDNGLAY-ESNGSVYFNVSEFDGKDKHYYARL 277
Query: 364 --KLWGRNENITQH--------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
+ +G N+++ + A KRS DFALWK +K GEP +ES WG+GRPGWHIECS
Sbjct: 278 VPEAYGDNKSLQEGEGDLTDSTAEKRSLNDFALWKQSKTGEPSWESPWGRGRPGWHIECS 337
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AMAS FG +D+HTGG+DLKFPHH+NE AQS A ++ WVNY+LHTGHL
Sbjct: 338 AMASDVFGDNLDIHTGGVDLKFPHHDNELAQSEAHFDKPGWVNYFLHTGHL 388
>gi|344302158|gb|EGW32463.1| hypothetical protein SPAPADRAFT_55908 [Spathaspora passalidarum
NRRL Y-27907]
Length = 763
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 170/486 (34%), Positives = 232/486 (47%), Gaps = 86/486 (17%)
Query: 15 TSCESPKWSLPSGYDTG---IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHA 71
T + P+W P + +KIYN +T++K F H+ WY+CGPTVYD H+GHA
Sbjct: 8 TPVKQPEWFAPVNKNDQKPTLKIYNSLTRSKEDFHTIRPGHISWYSCGPTVYDHSHMGHA 67
Query: 72 VCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKI 131
V DI RRIL+ YF + + +VTDIDDKII A++ +L
Sbjct: 68 RNYVSTDICRRILQDYFGYNIKFVQNVTDIDDKII-----------IAARQQYL------ 110
Query: 132 LHQKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDY 191
QKV + + +E + I S D K IN + +Y
Sbjct: 111 FEQKVSNVYTQLNDELLQNSKRFLSSYIEKNLPEFTGSIESEFDQWSKTIN----TQSNY 166
Query: 192 KTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQK 251
+T+ K KL + +K A V V +K +E LA IKD
Sbjct: 167 ETLVKEK--------------PKLPMYVKAATVAHQAVYSKAPGSIEEFLAA---IKDTA 209
Query: 252 CEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESME 311
V +F LP Y +E Y E M
Sbjct: 210 MPYLDSQYGSTVTDPEIFRKLPAY--------------------------WEKRYNEDMA 243
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH----YFKL-- 365
+ VLPPT TRVSE+IP I +++ +++ Y D SVYFD + H Y KL
Sbjct: 244 RLNVLPPTVTTRVSEYIPDIVAYVDRIIENGYGYRTDDGSVYFDTAKYEHSHHDYAKLQP 303
Query: 366 WGRNE---------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
W + + ++T K++P DFALWK++KPGEP +ES WGKGRPGWHIECS MA
Sbjct: 304 WNKGDMSLINDGEGSLTAGNAKKNPSDFALWKASKPGEPSWESKWGKGRPGWHIECSVMA 363
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRRLR 474
S G Q+D+H+GGIDL FPHH+NE AQS A+++ QWVNY++H GHL +G ++ L+
Sbjct: 364 SDITGEQMDIHSGGIDLCFPHHDNELAQSEAYYDNRQWVNYFMHNGHLHIQGQKMSKSLK 423
Query: 475 AARFIT 480
FIT
Sbjct: 424 --NFIT 427
>gi|358059978|dbj|GAA94252.1| hypothetical protein E5Q_00901 [Mixia osmundae IAM 14324]
Length = 834
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 169/511 (33%), Positives = 241/511 (47%), Gaps = 116/511 (22%)
Query: 3 ILSQSSLALSYATSCESPKWSLP---SGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACG 59
+ S++S A A S E W P +G ++++N +T++KV F+ +N N + WY+CG
Sbjct: 43 MASEASKAKGKAASTE---WQAPVSSAGESVRLRVFNSLTRSKVDFVPKNGNSVTWYSCG 99
Query: 60 PTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTV 119
PTVYD+ H+GHA V DI+RRI+ YF + ++TDIDDKII +A +
Sbjct: 100 PTVYDASHMGHARNYVTQDILRRIMRDYFGYDVHFVMNITDIDDKIIVRARQVY------ 153
Query: 120 AKRYFLPLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDK 179
L+ ++ Q+ G N DI L H+ + +T D
Sbjct: 154 -------LVDQLAEQQASGP--------SNALPDIFAAALTE--HLERAFPNDLTRTADS 196
Query: 180 IINKANSLKEDYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDE 239
+ L +++A + S P + RDE
Sbjct: 197 V-----DLDASLQSIASKA---------------------------SDPTWLEAQRQRDE 224
Query: 240 LLALGVQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGP-LTLR---TVVFE 295
+ L + + +A WQ + R L+L L+GP L R +V +
Sbjct: 225 KIGLHIATAQRGMQA-WQALTTNTPNAR-------ELVLANADLIGPYLDKRQGASVTDK 276
Query: 296 FLF---NFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSV 352
+F + R+E +F+ M+ V PPT TRVSEF+ I ++Q ++D AY + SV
Sbjct: 277 SIFRALSSRWEAAFFKDMQALSVEPPTTLTRVSEFVEEIVDYVQQIIDRGFAY-AAGGSV 335
Query: 353 YFD--------------VDSFPH--------------YFKL--WGRNE---------NIT 373
YFD D+ P Y KL W R ++T
Sbjct: 336 YFDTVGFDGAPCNCNDLADAKPKKMNGTHTEEQWNHSYAKLSPWSRGNAKLLADGEGSLT 395
Query: 374 QHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDL 433
A KR+ DFALWK++K GEP ++S WGKGRPGWHIECS MA H FG +D+H+GGIDL
Sbjct: 396 GSAGKRAASDFALWKASKAGEPAWDSPWGKGRPGWHIECSVMADHVFGQGMDIHSGGIDL 455
Query: 434 KFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FPHH+NE AQS A+H QW NY+LHTGHL
Sbjct: 456 TFPHHDNEIAQSEAYHGCRQWTNYFLHTGHL 486
>gi|354544914|emb|CCE41639.1| hypothetical protein CPAR2_801890 [Candida parapsilosis]
Length = 770
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 169/486 (34%), Positives = 246/486 (50%), Gaps = 93/486 (19%)
Query: 16 SCESPKWSLPSGYDT---GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAV 72
S + PKW PS + +KIYN +T+TK F H+ WY+CGPTVYD H+GHA
Sbjct: 20 SVQQPKWYEPSDKSSTKPKLKIYNSLTRTKNDFHPIKPGHITWYSCGPTVYDHSHMGHAR 79
Query: 73 CNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKIL 132
V DI RRIL+ YF + + I +VTDIDDKII A + +A +Y
Sbjct: 80 NYVSTDICRRILQDYFGYNVLFIQNVTDIDDKIIIAARQQHLFEEKIASQY--------- 130
Query: 133 HQKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYK 192
+ V + LD+ R L++Y + + D++ + + S+ +++
Sbjct: 131 --RDVKEV-----------LDLTRTSLKYY--VKKNLPEFKGDVEKDFVTWSQSIP-NFE 174
Query: 193 TVAKRYFLRLIFKILHQKVVRKL-AIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQK 251
V K + F + + VVR + AI+ + S F D++ + V D++
Sbjct: 175 EVKKE---KPKFPMYVKAVVRAINAINDENISYHS---------FLDDVKDVAVVYLDKE 222
Query: 252 CEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESME 311
A+ V +F LPLY +E ++ E M
Sbjct: 223 YGAS-------VTEPSIFKKLPLY--------------------------WENKFNEDMS 249
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH----YFKL-- 365
K VL P+ TRVSE++P I ++ ++ AY D SVYFD + H Y KL
Sbjct: 250 KLNVLSPSITTRVSEYVPDIIDYVDKIISNGYAYATEDGSVYFDTVKYEHSKHDYAKLQP 309
Query: 366 WGRNE---------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
W + + +++ KRSP DFALWK++KPGEP ++S WGKGRPGWHIECS MA
Sbjct: 310 WNKGDMSLINDGEGSLSLGNSKRSPSDFALWKASKPGEPAWDSKWGKGRPGWHIECSVMA 369
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRRLR 474
S G Q+D+H+GG+DL FPHH+NE AQS A+ + +QWVNY++H GHL +G ++ L+
Sbjct: 370 SDITGSQMDIHSGGVDLCFPHHDNELAQSEAYFDNNQWVNYFMHNGHLHIQGQKMSKSLK 429
Query: 475 AARFIT 480
FIT
Sbjct: 430 --NFIT 433
>gi|403175442|ref|XP_003334258.2| cysteinyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375171604|gb|EFP89839.2| cysteinyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 940
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 167/503 (33%), Positives = 247/503 (49%), Gaps = 103/503 (20%)
Query: 19 SPKWSLPSGYD--TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVK 76
+P+ S PSG + + +++YN +TK+KVPFI + N + WY CGPTVYD+ H+GHA V
Sbjct: 50 APQQSQPSGAEVSSNLRVYNSLTKSKVPFIPKEPNKITWYNCGPTVYDASHMGHARNYVT 109
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKV 136
DI+RRI YF + +VTDIDDKII +A Q +
Sbjct: 110 QDILRRIARDYFAYDVKFVMNVTDIDDKIIQRAR----------------------QQHL 147
Query: 137 VGSIPTRGHAVCNVKLDIIRRILEHYF-HIHSIVISSVTDIDDKIINKANSLKEDYKTVA 195
+ ++ ++ + D +R+ LE Y + ++ + +++ + A+ L+ + VA
Sbjct: 148 LENLRSKADLITPELTDQVRQSLESYANNTVKKLLGNELSLEEVLQKAASQLQWKAEMVA 207
Query: 196 KRYFLRLIFKIL---HQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKC 252
K + + L H+ + R AI L +D+ + + D + + DQK
Sbjct: 208 KEEKFGMWIEALGSAHKALGR--AICLSDMSIDNS--RAEAERLIDGASEVLSKWLDQKY 263
Query: 253 EATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEK 312
+T + +F L +Y +E +F+ M
Sbjct: 264 GST-------ITDHAIFKKLAVY--------------------------WEKSFFDDMAT 290
Query: 313 FGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH----------- 361
GV PP+ TRVS+++ I ++Q +++ AY+ + SVYFDV++F
Sbjct: 291 LGVEPPSVLTRVSDYVEEIVEYVQKIVERGFAYV-HEGSVYFDVNAFDGAEVKDHPSQQT 349
Query: 362 ----YFKLW-GRNEN-----------------ITQHAVKRSPFDFALWKSAKPGEPWYES 399
Y KL G N T VKRSP DFALWK +KPGEP ++S
Sbjct: 350 FSHCYAKLQPGSKANKKLMEEGEGALSVNPASSTATDVKRSPADFALWKKSKPGEPGWQS 409
Query: 400 AWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWL 459
WG GRPGWHIECS MAS G +D+H+GG+DL FPHH+NE AQS A+HN QWVNY+L
Sbjct: 410 VWGMGRPGWHIECSVMASAILGDGMDIHSGGVDLMFPHHDNEMAQSEAYHNCPQWVNYFL 469
Query: 460 HTGHL--RGTDGTRRLRAARFIT 480
HTGHL G ++ L+ FIT
Sbjct: 470 HTGHLHIEGLKMSKSLK--NFIT 490
>gi|190347294|gb|EDK39538.2| hypothetical protein PGUG_03636 [Meyerozyma guilliermondii ATCC
6260]
Length = 769
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 168/494 (34%), Positives = 237/494 (47%), Gaps = 90/494 (18%)
Query: 8 SLALSYATSCESPKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSP 66
+++ + A S P+W P+ + + IYN +T+TK F NH+ WY CGPTVYD
Sbjct: 9 TMSTTTARSASQPQWRQPAKTASVPLMIYNSLTRTKTEFNTLVPNHVTWYCCGPTVYDHS 68
Query: 67 HIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLP 126
H+GHA V DI RRIL+ YF + + +VTDIDDKII A + Y
Sbjct: 69 HMGHARNYVSTDISRRILQDYFGYNVTFVQNVTDIDDKIIVAAR----------QEYLFE 118
Query: 127 LIFKILHQKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS 186
+H V + +G R L +Y + +++D + I +
Sbjct: 119 QKLANVHDSVTEPLLKQG-----------REFLAYYIN------KNLSDFNQNIEKDLVA 161
Query: 187 LKEDYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQ 246
+ A L + L V K A K DS + T F + + + +
Sbjct: 162 WTQSLDITA----LAVSSPKLPMHV--KAATAAHKVLYDSAALNTPLPTFLESIRDVAMP 215
Query: 247 IKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEY 306
D++ +T V +F LP Y +E FN
Sbjct: 216 ALDKEYGST-------VNDPSIFKKLPSY------------------WEGKFN------- 243
Query: 307 FESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH----- 361
E M + VLPPT TRVSE+IP I +F++ ++ AY D SVYFD F +
Sbjct: 244 -EDMARLNVLPPTYTTRVSEYIPEIMAFVEKIISNGFAYPTKDGSVYFDTAKFENDPKHD 302
Query: 362 YFKL--WGRNE-----------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGW 408
Y KL W + + ++ Q + K++P DFALWK++KPGEP ++S WG GRPGW
Sbjct: 303 YAKLQPWNKGDMSLINDGEGSLSLGQES-KKNPADFALWKASKPGEPAWDSKWGPGRPGW 361
Query: 409 HIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RG 466
HIECS MAS G +D+H+GGIDL FPHH+NE AQS A+ N QWVNY++H GHL +G
Sbjct: 362 HIECSVMASDITGETMDIHSGGIDLCFPHHDNELAQSEAYFNNEQWVNYFMHNGHLHIQG 421
Query: 467 TDGTRRLRAARFIT 480
++ L+ FIT
Sbjct: 422 QKMSKSLK--NFIT 433
>gi|146416571|ref|XP_001484255.1| hypothetical protein PGUG_03636 [Meyerozyma guilliermondii ATCC
6260]
Length = 769
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 168/494 (34%), Positives = 237/494 (47%), Gaps = 90/494 (18%)
Query: 8 SLALSYATSCESPKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSP 66
+++ + A S P+W P+ + + IYN +T+TK F NH+ WY CGPTVYD
Sbjct: 9 TMSTTTARSASQPQWRQPAKTASVPLMIYNSLTRTKTEFNTLVPNHVTWYCCGPTVYDHS 68
Query: 67 HIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLP 126
H+GHA V DI RRIL+ YF + + +VTDIDDKII A + Y
Sbjct: 69 HMGHARNYVSTDISRRILQDYFGYNVTFVQNVTDIDDKIIVAAR----------QEYLFE 118
Query: 127 LIFKILHQKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS 186
+H V + +G R L +Y + +++D + I +
Sbjct: 119 QKLANVHDSVTEPLLKQG-----------REFLAYYIN------KNLSDFNQNIEKDLVA 161
Query: 187 LKEDYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQ 246
+ A L + L V K A K DS + T F + + + +
Sbjct: 162 WTQSLDITA----LAVSSPKLPMHV--KAATAAHKVLYDSAALNTPLPTFLESIRDVAMP 215
Query: 247 IKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEY 306
D++ +T V +F LP Y +E FN
Sbjct: 216 ALDKEYGST-------VNDPSIFKKLPSY------------------WEGKFN------- 243
Query: 307 FESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH----- 361
E M + VLPPT TRVSE+IP I +F++ ++ AY D SVYFD F +
Sbjct: 244 -EDMARLNVLPPTYTTRVSEYIPEIMAFVEKIISNGFAYPTKDGSVYFDTAKFENDPKHD 302
Query: 362 YFKL--WGRNE-----------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGW 408
Y KL W + + ++ Q + K++P DFALWK++KPGEP ++S WG GRPGW
Sbjct: 303 YAKLQPWNKGDMSLINDGEGSLSLGQES-KKNPADFALWKASKPGEPAWDSKWGPGRPGW 361
Query: 409 HIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RG 466
HIECS MAS G +D+H+GGIDL FPHH+NE AQS A+ N QWVNY++H GHL +G
Sbjct: 362 HIECSVMASDITGETMDIHSGGIDLCFPHHDNELAQSEAYFNNEQWVNYFMHNGHLHIQG 421
Query: 467 TDGTRRLRAARFIT 480
++ L+ FIT
Sbjct: 422 QKMSKSLK--NFIT 433
>gi|58332582|ref|NP_001011365.1| cysteine--tRNA ligase, cytoplasmic [Xenopus (Silurana) tropicalis]
gi|82232096|sp|Q5M7N8.1|SYCC_XENTR RecName: Full=Cysteine--tRNA ligase, cytoplasmic; AltName:
Full=Cysteinyl-tRNA synthetase; Short=CysRS
gi|56788842|gb|AAH88531.1| cysteinyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
Length = 747
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 156/466 (33%), Positives = 223/466 (47%), Gaps = 102/466 (21%)
Query: 20 PKWSLP-SGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P WS P + G+++YN +T++K F+ Q+ N + WY CGPTVYD+ H+GHA + D
Sbjct: 15 PPWSAPNTQAQPGLRLYNSLTRSKELFVPQDGNKVTWYCCGPTVYDASHMGHARSYISFD 74
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVG 138
I+RR+L YF ++TDIDDKII +A + ++ +R P L Q V
Sbjct: 75 ILRRVLRDYFKYDVFYCMNITDIDDKIIKRARQ-RHLFQQYRERNPRP---SDLLQDVSA 130
Query: 139 SIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
++ + R++LE IH V +++ + D + + A +
Sbjct: 131 ALTPFLQRISEANDPDKRQMLE---RIHGSVSAALLPLQDAVSSNARA------------ 175
Query: 199 FLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQF 258
+ + +L+ +L +A VD ++ DE G QI D
Sbjct: 176 -----------EELERLSQELMEAAVDL------LSDWLDE--KHGAQITD--------- 207
Query: 259 KDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPP 318
+ +F LP + +E EY ME VLPP
Sbjct: 208 -------NSIFSQLPKH--------------------------WESEYHRDMEALNVLPP 234
Query: 319 TRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF----PHYFKLWGRNENITQ 374
TRVSE++P I +F+Q ++D Y+ S+ SVYF F HY+ Q
Sbjct: 235 DVLTRVSEYVPEIVAFVQRIVDNGYGYV-SNGSVYFSTAKFHASEKHYYAKLVPEAVGDQ 293
Query: 375 HAV----------------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
A+ K+SP DFALWK++KPGEP +ES WGKGRPGWHIECSAMA
Sbjct: 294 KALQEGEGDLSISADRLSEKQSPNDFALWKASKPGEPSWESPWGKGRPGWHIECSAMAGS 353
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+H GG DL+FPHH+NE AQS A+ + WV Y+LHTGHL
Sbjct: 354 ILGESMDIHGGGFDLRFPHHDNELAQSEAYFDNDHWVRYFLHTGHL 399
>gi|110757574|ref|XP_394641.3| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like [Apis
mellifera]
Length = 729
Score = 241 bits (615), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 167/480 (34%), Positives = 237/480 (49%), Gaps = 101/480 (21%)
Query: 20 PKWSLPSGYDTGI-KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P ++ + K+YN +T+ K F+ Q NH+ WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PSWVPPQRKNSSVLKLYNSLTRNKEIFVPQFGNHILWYSCGPTVYDASHMGHARSYMSFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVG 138
IIRR+L YF + + ++TDIDDKII +A +++Y L++K +
Sbjct: 67 IIRRVLSDYFGYDILYVMNITDIDDKIIKRA---RQNY---------------LYEKYIK 108
Query: 139 SIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
N LD I ++ +I + S TD D K+Y
Sbjct: 109 E---------NHTLDKILDDAKNVMYIFEDTVKSTTDTD------------------KKY 141
Query: 199 FLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQF 258
L+ I + +K + L +K D K EF++ LL +++D E +
Sbjct: 142 ILQNILCNV-EKAIENLEDAVKLKDED------KMKEFQELLLK---EVRDPLAEWLDKE 191
Query: 259 KDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPP 318
K V +F L Y +E E+ + M+ VL P
Sbjct: 192 KGAMVTEHSIFTKLSQY--------------------------WEQEFHKDMDSLNVLRP 225
Query: 319 TRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF----PHYF-----KLWGRN 369
TRVSE+IP I FI+ +++ AY S+ SVYFDV +F HY+ + +G
Sbjct: 226 NVLTRVSEYIPEIIEFIKKIIENGIAY-ESNGSVYFDVSTFNKQDKHYYAKLVPEAYGDT 284
Query: 370 ENITQH---------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ + + KRSP DFALWK +K GEPW+ES WGKGRPGWHIECS MAS
Sbjct: 285 LSLQEGEGDLSTLEISEKRSPIDFALWKCSKEGEPWWESPWGKGRPGWHIECSVMASIIC 344
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAARFIT 480
G +D+HTGG+DLKFPHH+NE AQ+ A+ N S WV Y+LH+GHL + FIT
Sbjct: 345 GESLDIHTGGVDLKFPHHDNEIAQAEAYFNNSNWVRYFLHSGHLTISGCKMSKSLKNFIT 404
>gi|312374234|gb|EFR21828.1| hypothetical protein AND_16292 [Anopheles darlingi]
Length = 744
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 154/455 (33%), Positives = 225/455 (49%), Gaps = 104/455 (22%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ +YN +T+ K F+ ++ +++WY+CGPTVYD+ H+GHA + DI+RR+L YF +
Sbjct: 20 LHLYNSLTRRKELFVPRDGRNVQWYSCGPTVYDASHMGHARSYISFDILRRVLSDYFGYN 79
Query: 92 SIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCN 149
+ + ++TDIDDKII +A N L E Y AK ++P
Sbjct: 80 VLYVMNITDIDDKIIKRARQNHLYEQYLEEAK-----------------AVP-------- 114
Query: 150 VKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQ 209
+ R+L+ + + +V A + D + + R RL
Sbjct: 115 -----LERLLDDSQEVMAAFRENV----------ARTTDTDKRAMMDRMLERLT------ 153
Query: 210 KVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGKVFSDRVF 269
+A+D V SG + ++ +++LL KD E + V + +F
Sbjct: 154 -----VAVDNLSLAVGSGKA-EQVNQAKEQLLH---DSKDPLSELLDSKRGSSVTENAIF 204
Query: 270 ISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIP 329
+LP Y +E E+ + M VLP TRVSE++P
Sbjct: 205 ETLPRY--------------------------WEDEFHKDMRALNVLPADVLTRVSEYVP 238
Query: 330 HIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL----WGRNENITQH----- 375
I ++I+ +++ AY ++ SVYFDV F HY KL +G + +
Sbjct: 239 EIVTYIERIIERGLAY-EANGSVYFDVARFDGRPEHHYAKLVPEAYGDARQLQEGEGDLS 297
Query: 376 ------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTG 429
KRSP DFALWK++K GEPW++S WGKGRPGWHIECSAMAS G +D+HTG
Sbjct: 298 TGEDRLGEKRSPNDFALWKASKAGEPWWDSPWGKGRPGWHIECSAMASAICGDYLDIHTG 357
Query: 430 GIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G+DLKFPHH+NE AQS A S+WV Y+LHTGHL
Sbjct: 358 GVDLKFPHHDNELAQSEAHDGSSEWVKYFLHTGHL 392
>gi|346319235|gb|EGX88837.1| cysteinyl-tRNA synthetase [Cordyceps militaris CM01]
Length = 813
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 157/474 (33%), Positives = 229/474 (48%), Gaps = 77/474 (16%)
Query: 32 IKIYNPITKTKVPFIIQNKNH--LKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
+KIYN +T+ F+ + + WYACGPTVY+ H+GHA V DIIRRI+ YF
Sbjct: 25 LKIYNSLTRNNDDFVPADPTGKLVTWYACGPTVYEDAHLGHAKNYVSTDIIRRIMTDYFG 84
Query: 90 IHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCN 149
H + + TDIDDKII A++ L +F+ H G V +
Sbjct: 85 FHVKFVMNTTDIDDKII-----------LAARQQHLLALFEKEHAAEDG-------LVSD 126
Query: 150 VKLDIIRRILEHYFHIHSIVISSVTDID--DKIINKANSLKEDYKTVAKRYFLRLIFKIL 207
L + + L Y + + S TD+D K ++K K VA R +
Sbjct: 127 TVLTVAKAALRQYIAKNLPSLPSDTDLDTISKAVDKVYGEKVAPTAVANPAAARHSQAVT 186
Query: 208 HQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGKVFSDR 267
++ K + ++ +++ K EF + + + D A + K++ R
Sbjct: 187 VDDLLLKAHLGTAQSAIEALHSPPKLPEFLAKTNDILLPYLDALHGADVDSNNHKIYLQR 246
Query: 268 VFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEF 327
++E +FE M+ VLPP + TRV+E+
Sbjct: 247 TQ-------------------------------KFERRFFEDMDALNVLPPHQLTRVTEY 275
Query: 328 IPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH----YFKL--WGRNENITQH------ 375
+P I F+ ++ AY SD SVYFD+DSF Y +L W +N+ Q
Sbjct: 276 VPQIAQFVDKIVANGFAYATSDGSVYFDIDSFEKAGHSYSRLEPWNKNDRALQADGEGSL 335
Query: 376 ----AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGI 431
++KRSP DFALWK++KPGEP + S WG GRPGWHIECSAMAS G +D+H+GG+
Sbjct: 336 SKGGSMKRSPNDFALWKASKPGEPAWPSVWGHGRPGWHIECSAMASDVLGKTIDIHSGGV 395
Query: 432 DLKFPHHENEEAQSCAFHN----QSQWVNYWLHTGHLRGTDGTRRLRAARFITN 481
DL+FPHH+NE AQS A+ + Q QW NY++H G LR R L+ ++ + N
Sbjct: 396 DLRFPHHDNELAQSEAYWSTPGCQVQWTNYFIHMGPLR----IRGLKMSKSLKN 445
>gi|321453850|gb|EFX65049.1| hypothetical protein DAPPUDRAFT_265305 [Daphnia pulex]
Length = 676
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 159/474 (33%), Positives = 241/474 (50%), Gaps = 107/474 (22%)
Query: 30 TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
T + IYN +T+ K F QN N++ WY+CGPTVYD+ H+GHA + DI+RR+L YF
Sbjct: 12 TKLMIYNSLTRKKEVFTPQNGNNITWYSCGPTVYDASHMGHARSYMSFDILRRVLRDYFG 71
Query: 90 IHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +A +++Y L++K +A +
Sbjct: 72 YDITYVMNITDIDDKIIKRA---RQNY---------------LYEK---------YAAES 104
Query: 150 VKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQ 209
+L+ +R+ +E + ++ TD D K++ + ++ K+
Sbjct: 105 SELETLRKDVEESVGRLAKQMAVTTDPDKKVMQET-----------------MLAKVT-- 145
Query: 210 KVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGKVFSDR-V 268
AI+ K A++ S C + + L+A + KD + K G SD +
Sbjct: 146 -----AAIN-KSAEITSKAADGLCHDAKSFLMA---EAKDVLSDWLDSIKHGMDVSDNAI 196
Query: 269 FISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFI 328
F SLP Y +E E+++ M VLP TRVS+++
Sbjct: 197 FASLPRY--------------------------WEEEFYKDMAALNVLPADVITRVSQYV 230
Query: 329 PHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL----WGRNENITQH---- 375
P I +I +++ AY ++ SVYFDV F Y KL +G ++ + +
Sbjct: 231 PEIVDYIAKIMERGFAY-SANGSVYFDVAKFDSQKNHKYAKLVPEAYGDSKALQEGEGDL 289
Query: 376 -------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHT 428
+ K+SP DFALWK++K GEP ++S WGKGRPGWHIECS MAS G +D HT
Sbjct: 290 SVSEDRLSEKKSPNDFALWKNSKSGEPSWDSPWGKGRPGWHIECSVMASAILGSSMDFHT 349
Query: 429 GGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRRLRAARFIT 480
GG+DLKFPHH+NE AQS A+++ +WV+Y+LHTGHL +G ++ L+ FIT
Sbjct: 350 GGVDLKFPHHDNELAQSEAYYDNDEWVSYFLHTGHLTIQGCKMSKSLK--NFIT 401
>gi|444314461|ref|XP_004177888.1| hypothetical protein TBLA_0A05760 [Tetrapisispora blattae CBS 6284]
gi|387510927|emb|CCH58369.1| hypothetical protein TBLA_0A05760 [Tetrapisispora blattae CBS 6284]
Length = 771
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 173/494 (35%), Positives = 242/494 (48%), Gaps = 98/494 (19%)
Query: 12 SYATSCESPKWSLPSG----YDTGIKIYNPITKTKVPFIIQNKN-HLKWYACGPTVYDSP 66
S ++ PKW PS +K+YN +T++K FI +KN ++ WY+CGPTVYDS
Sbjct: 16 STSSKVNQPKWYKPSSPTPEETVVLKLYNTLTRSKEEFIPISKNKNVTWYSCGPTVYDSS 75
Query: 67 HIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLP 126
H+GHA V +DI RRIL+ YF + + +VTDIDDKII + A++ +L
Sbjct: 76 HMGHARNYVSIDINRRILQDYFGYNINFVQNVTDIDDKIIIR-----------ARQNYLF 124
Query: 127 LIFKILHQKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS 186
F H + + LD I L +Y I+S + S+ I D +N
Sbjct: 125 ENFMEQHSSISQKL-----------LDYINSALFNY--INSNLNDSIKTIPDFQTWVSNL 171
Query: 187 LKEDYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQ 246
KE+ K ++ +H I L + + P+ +EF + + V
Sbjct: 172 NKEEEKMKNPKF-------PMHLTASENAIIALSRESI---PI----EEFFKLVKDVTVP 217
Query: 247 IKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEY 306
+ D + +T + VF LP Y +E ++
Sbjct: 218 LLDSEFGST-------INDPEVFKKLPAY--------------------------WERQF 244
Query: 307 FESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----H 361
M + VLPPT TRVSE++P I +F++ ++ AY D SVYFD F
Sbjct: 245 DRDMSRLNVLPPTLTTRVSEYVPEIITFVEKIIANGYAYPSDDGSVYFDTVKFDASQNHD 304
Query: 362 YFKL--WGRNE---------NITQHAV--KRSPFDFALWKSAKPGEPWYESAWGKGRPGW 408
Y K W + + ++T A K+SP DFALWK++KPGEP + S WGKGRPGW
Sbjct: 305 YAKCQPWNKGQLDLINDAEGSLTNFATGSKKSPNDFALWKNSKPGEPEWVSPWGKGRPGW 364
Query: 409 HIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RG 466
HIECS MAS G D+H+GGIDL FPHH+NE AQS A + QWVNY+LHTGHL G
Sbjct: 365 HIECSVMASDIHGESFDIHSGGIDLAFPHHDNELAQSEAHFDYHQWVNYFLHTGHLHIEG 424
Query: 467 TDGTRRLRAARFIT 480
++ L+ FIT
Sbjct: 425 QKMSKSLK--NFIT 436
>gi|410079152|ref|XP_003957157.1| hypothetical protein KAFR_0D03740 [Kazachstania africana CBS 2517]
gi|372463742|emb|CCF58022.1| hypothetical protein KAFR_0D03740 [Kazachstania africana CBS 2517]
Length = 764
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 171/485 (35%), Positives = 236/485 (48%), Gaps = 96/485 (19%)
Query: 20 PKWSLPS---GYDTGIKIYNPITKTKVPFI-IQNKNHLKWYACGPTVYDSPHIGHAVCNV 75
PKW P +K+YN +T+ K FI + N + WY+CGPTVYD+ H+GHA V
Sbjct: 19 PKWYKPQPVVAKKPVLKLYNSLTRDKEEFIPLSGTNLVSWYSCGPTVYDASHMGHARNYV 78
Query: 76 KLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQK 135
+DI RRI+E YF + +VTDIDDKII +A +++Y L++K
Sbjct: 79 SIDINRRIMEKYFGYDINFVQNVTDIDDKIIIRA---RQNY---------------LYEK 120
Query: 136 VVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVA 195
V ++ D + + + ++ DK+ + A S +E +KTV
Sbjct: 121 FVNETEKINDSIITKVQDTLTQFIASQLNL------------DKVDSIA-SFQEWFKTVD 167
Query: 196 KRYFLRLIFKILHQKVVRKL-AIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEA 254
+ K + K + AI ++S ++K DE AL KD A
Sbjct: 168 FE-----LEKTNNPKFPMYITAIQNTIKAIESNDKISK-----DEFFALA---KDTLVPA 214
Query: 255 TWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFG 314
+ V +F LP Y +E FN M
Sbjct: 215 LDKESGSSVNDPEIFRKLPAY------------------WEQQFN--------NDMAHLN 248
Query: 315 VLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK-------LWG 367
VLPP+ TRVSE++P I F++ ++D AY D SVYFD F K W
Sbjct: 249 VLPPSVTTRVSEYVPEIVQFVKDIIDNGYAYATDDGSVYFDTVRFDSSSKHDYAKCQPWN 308
Query: 368 RNE----NITQHAV------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
+ + N + ++ KRS DFALWK++KPGEP +ES WGKGRPGWHIECS MAS
Sbjct: 309 KGKLDLINDGEGSLSINTTGKRSKNDFALWKTSKPGEPEWESPWGKGRPGWHIECSVMAS 368
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRRLRA 475
G Q+D+H+GGIDL FPHH+NE AQS A H+ QW+NY+LHTGHL G ++ L+
Sbjct: 369 DVLGSQIDIHSGGIDLAFPHHDNELAQSEAKHDNHQWINYFLHTGHLHIEGQKMSKSLK- 427
Query: 476 ARFIT 480
FIT
Sbjct: 428 -NFIT 431
>gi|226287115|gb|EEH42628.1| cysteinyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
Length = 830
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 164/479 (34%), Positives = 246/479 (51%), Gaps = 77/479 (16%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLK--WYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
+KIYN +T++KVPF+ + + K WYACGPTVYD H+GHA V DI+RRI+ YF+
Sbjct: 26 LKIYNSLTRSKVPFVPLDPSGRKVTWYACGPTVYDDAHLGHARNYVSNDILRRIMRDYFN 85
Query: 90 IHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQ--KVVGSIPTRGHAV 147
I ++TD+DDK+ K F P + + H V G I +RG
Sbjct: 86 FDVQFIMNITDVDDKVRGK---------------FSPCFWSLAHGLIYVPGRIISRGRQ- 129
Query: 148 CNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLIFKIL 207
+H+F + ++S IDD +++ + A +L +L
Sbjct: 130 ------------QHFFTEY---VNSHPSIDDDVLSTVRA--------AFAAYLEKKLPLL 166
Query: 208 HQKVV-RKLAIDLKK--AKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFK----D 260
+ + + +++K A + +G L + D+ + + IK A K
Sbjct: 167 EAGLTPERYSGEVEKVYAAILNGGALDGSGKPGDDEAKIKMHIKTAASAANMLSKIATSK 226
Query: 261 GKVFSDRVFISLPLYLILIQVSLLGPLTLR---TVVFEFLFNFRYELEYFESMEKFGVLP 317
+ S+ + ++ L+ SL G ++R +F L YE + + + VL
Sbjct: 227 ESILSETFYKNVQDVLLEHLDSLYGS-SIRGEDRSIFTKLTK-TYEDRFMKDIRDLNVLD 284
Query: 318 PTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP----HYFKL--WGRNEN 371
P TRV+E++P I F++ ++ K AY+ SD SVYFD+ +F Y +L W RN+
Sbjct: 285 PDAVTRVTEYMPEIVQFVERIVQHKFAYVTSDGSVYFDITAFEASGNSYARLEPWNRNDT 344
Query: 372 ----------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFG 421
I + KRSP DFALWK++K GEP + S WG GRPGWHIECSAMAS G
Sbjct: 345 KLQAEGEGALINRTTEKRSPADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLG 404
Query: 422 GQVDLHTGGIDLKFPHHENEEAQSCAFHN----QSQWVNYWLHTGHL--RGTDGTRRLR 474
Q+D+H+GGIDL FPHH+NE AQS A+ + Q+ WVNY+LH GHL +G+ ++ L+
Sbjct: 405 KQMDIHSGGIDLAFPHHDNELAQSEAYWHENCAQNHWVNYFLHMGHLSIQGSKMSKSLK 463
>gi|294657639|ref|XP_459935.2| DEHA2E14476p [Debaryomyces hansenii CBS767]
gi|199432842|emb|CAG88179.2| DEHA2E14476p [Debaryomyces hansenii CBS767]
Length = 780
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 161/486 (33%), Positives = 234/486 (48%), Gaps = 89/486 (18%)
Query: 17 CESPKWSLPS---GYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
+ P+W PS G + IYN +T++K FI NH+ WY CGPTVYD H+GHA
Sbjct: 25 VQQPEWIKPSRQTGDAPVLHIYNSLTRSKDEFIPLRNNHITWYCCGPTVYDHSHMGHARN 84
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILH 133
V DI RRIL+ YF + I +VTDIDDKII A++ +L
Sbjct: 85 YVSTDICRRILQDYFGYNVKFIQNVTDIDDKII-----------IAARQEYL------FE 127
Query: 134 QKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKT 193
Q+V ++ AV LD+ + LE+Y ++ TD++ I +S+
Sbjct: 128 QRV----SSKYTAVTPKLLDVSKEYLEYYI-TKTLPQFEKTDVEKDFIPWLDSVNVQEIA 182
Query: 194 VAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCE 253
V F ++ K R + + ++ P+ D++ + + + D +
Sbjct: 183 VTNPKF------PMYTKAARTAHSSIYSSASETTPI----DDYLSSIKEVAMPFLDNELG 232
Query: 254 ATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKF 313
+T V +F LP + +E ++ + M +
Sbjct: 233 ST-------VNDPSIFRKLPSF--------------------------WEKKFNDDMGRL 259
Query: 314 GVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH-----YFKL--W 366
VLPP+ TRVSE+IP + F++ ++ AY D SVYFD F + Y KL W
Sbjct: 260 NVLPPSITTRVSEYIPDVIEFVEKIITNGFAYATKDGSVYFDTAKFENDPNHDYAKLQPW 319
Query: 367 ----------GRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
G T K++ DFALWK +KPGEP + S WG+GRPGWHIECS MA
Sbjct: 320 NKGDMSLINDGEGSLSTGQDTKKNAADFALWKGSKPGEPSWPSKWGEGRPGWHIECSVMA 379
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRRLR 474
S G +D+H+GG+DL FPHH+NE AQS A+ + QWVNY++H GHL +G ++ L+
Sbjct: 380 SDITGQTMDIHSGGVDLCFPHHDNELAQSEAYFDNKQWVNYFMHNGHLHIQGQKMSKSLK 439
Query: 475 AARFIT 480
FIT
Sbjct: 440 --NFIT 443
>gi|295666742|ref|XP_002793921.1| cysteinyl-tRNA synthetase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226277574|gb|EEH33140.1| cysteinyl-tRNA synthetase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 820
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 164/479 (34%), Positives = 246/479 (51%), Gaps = 77/479 (16%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLK--WYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
+KIYN +T++KVPF+ + + K WYACGPTVYD H+GHA V DI+RRI+ YF+
Sbjct: 26 LKIYNSLTRSKVPFVPLDPSGRKVTWYACGPTVYDDAHLGHARNYVSNDILRRIMRDYFN 85
Query: 90 IHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQ--KVVGSIPTRGHAV 147
I ++TD+DDK+ K F P + + H V G I +RG
Sbjct: 86 FDVQFIMNITDVDDKVRGK---------------FSPCFWSLAHGLIYVPGRIISRGRQ- 129
Query: 148 CNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLIFKIL 207
+H+F + ++S IDD +I+ + A +L +L
Sbjct: 130 ------------QHFFTEY---VNSHPSIDDDVISTVRA--------AFAAYLEKKLPLL 166
Query: 208 HQKVV-RKLAIDLKK--AKVDSGPVLTKCDEFRDELLALGVQIKDQKCEA----TWQFKD 260
+ + + +++K A + +G L + D+ + + IK A T
Sbjct: 167 EAGLTPERYSDEVEKVYAAILNGGALDGSGKPGDDEAKIKMHIKTAASAANVLSTIATSK 226
Query: 261 GKVFSDRVFISLPLYLILIQVSLLGPLTLR---TVVFEFLFNFRYELEYFESMEKFGVLP 317
+ S+ + ++ L+ SL G ++R +F L YE + + + VL
Sbjct: 227 ESILSETFYKNVQDVLLEHLDSLYGS-SIRGEDRSIFTKLTK-TYEDRFMKDIRDLNVLD 284
Query: 318 PTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP----HYFKL--WGRNEN 371
P TRV+E++P I F++ ++ K AY+ SD SVYFD+ +F Y +L W RN+
Sbjct: 285 PDAVTRVTEYMPEIVQFVERIVQHKFAYVTSDGSVYFDITAFEASGNSYARLEPWNRNDT 344
Query: 372 ----------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFG 421
I + KRSP DFALWK++K GEP + S WG GRPGWHIECSAMAS G
Sbjct: 345 KLQAEGEGALINRTTEKRSPADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLG 404
Query: 422 GQVDLHTGGIDLKFPHHENEEAQSCAFHNQS----QWVNYWLHTGHL--RGTDGTRRLR 474
Q+D+H+GGIDL FPHH+NE AQS A+ +++ WVNY+LH GHL +G+ ++ L+
Sbjct: 405 KQMDIHSGGIDLAFPHHDNELAQSEAYWHENCAHDHWVNYFLHMGHLSIQGSKMSKSLK 463
>gi|440793630|gb|ELR14809.1| cysteine-tRNA ligase [Acanthamoeba castellanii str. Neff]
Length = 797
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 167/506 (33%), Positives = 239/506 (47%), Gaps = 94/506 (18%)
Query: 19 SPKWSLPS-GYDTGIKIYNPI-----TKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAV 72
P W P+ G D G+++ N + + VPF Q+ N +KWY CGPTVYDS H GHA
Sbjct: 16 QPHWHQPADGVDKGLQVLNSLKVDAKSNVLVPFRPQHGNLIKWYICGPTVYDSAHFGHAR 75
Query: 73 CNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKIL 132
V D+IRRILE YF+ + ++TD+DDKII +A K + L L ++
Sbjct: 76 NYVTFDVIRRILEDYFNYDVYAVMNITDVDDKIILRAR----------KNHLLKL-YEEA 124
Query: 133 HQKVVGSI-PTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDY 191
H + + + K D+ ++I E I +V + K+
Sbjct: 125 HATLTAQVFEDIAEGFGDYKKDLEKKIQELEVEIAQLV----------------ARKKKN 168
Query: 192 KTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQK 251
KT K +L+ L + A+ + +V +G D K
Sbjct: 169 KTFEKEAEKKLLADKLALVPEAEAAVAKLRERVAAG---------------------DDK 207
Query: 252 CEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFN---FRYELEYFE 308
+ F + D V LL ++ E +F RYE E+ E
Sbjct: 208 VPSALAFAEVGSVRDVV------------ADLLDKRDGHSITDERIFRAHAARYEEEFLE 255
Query: 309 SMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGR 368
M++ GV P TRV+EFIP I +++Q + AY S+ SVYF ++F +G+
Sbjct: 256 DMKELGVRVPDVMTRVTEFIPEIVTYVQQIEANGLAY-ESNGSVYFHTEAFAQRGHAYGK 314
Query: 369 NE-----------------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIE 411
E + + K S DFALWK +KPGEP ++S WG+GRPGWHIE
Sbjct: 315 LEPWSVGDGKLLKSGEGALSDKKGDKKASENDFALWKQSKPGEPSWDSPWGRGRPGWHIE 374
Query: 412 CSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
CSAMAS FG +D+H+GG DL+FPHH+NE AQ+ A + QWVNY+LH+GHL DG
Sbjct: 375 CSAMASDLFGDNMDIHSGGSDLRFPHHDNELAQAEAHYGCKQWVNYFLHSGHLH-IDG-- 431
Query: 472 RLRAARFITNLSGSTIGYTRDTCAGR 497
L+ ++ + N TI TC+ R
Sbjct: 432 -LKMSKSLKNF--ITIREALQTCSPR 454
>gi|67903626|ref|XP_682069.1| hypothetical protein AN8800.2 [Aspergillus nidulans FGSC A4]
gi|40741403|gb|EAA60593.1| hypothetical protein AN8800.2 [Aspergillus nidulans FGSC A4]
Length = 838
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 170/502 (33%), Positives = 249/502 (49%), Gaps = 84/502 (16%)
Query: 7 SSLALSYATSCESPKWSLPSGYDTG-----IKIYNPITKTKVPFIIQNKNHLK--WYACG 59
S LA AT+ E P W P+ + +K+YN +TK+K PFI + + K WYACG
Sbjct: 27 SVLARFMATAREQPAWRQPTAHPEAQSLPSLKVYNSLTKSKTPFIPIDPHGKKVTWYACG 86
Query: 60 PTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTV 119
PTVYD H+GHA V DIIRRI+ YF + + ++TD+DDK+ N ++
Sbjct: 87 PTVYDDAHLGHARNYVSTDIIRRIMRDYFKFNVHFVMNITDVDDKV----NGVQ------ 136
Query: 120 AKRYFLPLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDK 179
+I + Q + T V LD+ ++ Y + ++S D
Sbjct: 137 -------IILRARQQHLFTKFVTAHPTVDEEVLDVAKKAYAAYLKKNLPLLSPELPPSDY 189
Query: 180 IINKANSLKEDYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDE 239
K V K Y + L L K D K K+ V +
Sbjct: 190 -----------SKEVEKAYAVILNGGPLPGN--EKAGDDEAKIKMHIKTVSS-------- 228
Query: 240 LLALGVQIKDQKCEATWQ--FKDGKVFSDRVFISLPLYLILIQVSLLGP-----LTLRTV 292
A V ++ +K + + Q F + + ++D + LP YL ++ SL+ T T
Sbjct: 229 --AANVIVEAEKLDKSAQGTFPE-RFYTDAQDLLLP-YLDALEGSLIDADDHSIFTKLTR 284
Query: 293 VFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSV 352
+E F + M+ VL P TRV+E+ I F++ +++ K Y+ +D SV
Sbjct: 285 KYEERF--------MKDMDDLNVLRPDELTRVTEYGQEIADFVEKIVENKFGYVSADGSV 336
Query: 353 YFDVDSFPH----YFKL--WGRNEN----------ITQHAVKRSPFDFALWKSAKPGEPW 396
YFD+++F Y +L W R++N + KRS DFALWKS+KPGEP
Sbjct: 337 YFDINAFEAAGFPYARLEPWSRSDNKLLAEGEGSLANKTTEKRSKSDFALWKSSKPGEPS 396
Query: 397 YESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF--HNQSQW 454
+ S+WG+GRPGWHIECSAMAS G +D+H+GGIDL FPHH+NE AQS A+ + QW
Sbjct: 397 WSSSWGRGRPGWHIECSAMASARLGKHMDIHSGGIDLAFPHHDNELAQSEAYWHSHGDQW 456
Query: 455 VNYWLHTGHL--RGTDGTRRLR 474
VNY+LH GHL +G+ ++ L+
Sbjct: 457 VNYFLHMGHLSIQGSKMSKSLK 478
>gi|353234345|emb|CCA66371.1| related to cysteinyl-tRNA synthetase [Piriformospora indica DSM
11827]
Length = 786
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 151/455 (33%), Positives = 224/455 (49%), Gaps = 71/455 (15%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T+ K FI N +KWY CGPTVYD+ H+GHA V DI+RRI+E YF
Sbjct: 20 LKVYNSLTRQKEEFIPAAGNLVKWYNCGPTVYDASHMGHARNYVTQDILRRIMEDYFGYD 79
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVK 151
++ ++TDIDDK +I + HQ ++ + R +
Sbjct: 80 VHLVMNITDIDDK----------------------IILRARHQYLIDDLKKRNPLLNQEL 117
Query: 152 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQKV 211
+D+ + E Y + V+ S+ + + +++ L ++ V R L L + +
Sbjct: 118 IDMTQDSWEKY--LKGKVLKSIPSAE--LEAQSSHLAAQWQYVQARV---LDPSWLQEAL 170
Query: 212 VRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGKVFSDRVFIS 271
R + ++ T + + + AT D+ +
Sbjct: 171 QRDEKFSMHITTLE-----TSFSALEVARMQMNAGSSSETAAAT--------LIDKSKDT 217
Query: 272 LPLYLIL-IQVSLLGPLTLR-TVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIP 329
L L L ++ ++ P R T F +E + M + V PPT TRV+E++P
Sbjct: 218 LALVLDEELKHTVSDPAIFRSTAAF-------WEDSFMADMARLRVKPPTTLTRVTEYVP 270
Query: 330 HIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP---------HYFKL--WGRNEN------- 371
I +FI+ ++ AY G D +V+FD +F Y KL W R
Sbjct: 271 EIVTFIEKIIANGFAYSGEDGNVWFDKAAFDGAPTQEWKHEYAKLAPWSRGNKALLAEGE 330
Query: 372 --ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTG 429
+T ++ KRSP DFALWK++K GEP + S WG+GRPGWHIECS MA+ G +D+H+G
Sbjct: 331 GALTSYSSKRSPEDFALWKASKAGEPAWPSPWGQGRPGWHIECSVMATDILGESMDIHSG 390
Query: 430 GIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
GIDL FPHH+NE AQS A+HN QWVNY+LHTGHL
Sbjct: 391 GIDLLFPHHDNELAQSEAYHNNVQWVNYFLHTGHL 425
>gi|303319833|ref|XP_003069916.1| cysteinyl-tRNA synthetase family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109602|gb|EER27771.1| cysteinyl-tRNA synthetase family protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 839
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 164/498 (32%), Positives = 233/498 (46%), Gaps = 91/498 (18%)
Query: 12 SYATSCESPKWSLPSGYDTG------IKIYNPITKTKVPFIIQNK--NHLKWYACGPTVY 63
+ A + E P W PS +K++N +T++KVPF+ + N + WYACGPTVY
Sbjct: 34 AMAAAREQPPWKQPSPSPESASKLPPLKLWNSLTRSKVPFVPLDPTGNKVTWYACGPTVY 93
Query: 64 DSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
D H+GHA V DI+RR+L YF I ++TD+DDKII +A
Sbjct: 94 DDAHLGHARNYVSTDILRRLLRDYFKFDVKFIMNITDVDDKIITRARQ------------ 141
Query: 124 FLPLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINK 183
+ L + V S PT IDD ++
Sbjct: 142 ------QHLFMEYVTSHPT---------------------------------IDDSVVET 162
Query: 184 ANSLKEDYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLAL 243
S E Y R L L+ + K + A+++K V +G L + D +
Sbjct: 163 ITSAYESY----VRKNLPLLEHVPTPKAFPE-AVEIKYGFVLNGGALGGTGKPGDAEAKI 217
Query: 244 GVQIKDQKCEATWQ---FKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNF 300
+ I+ A D F L ++L + L ++R +
Sbjct: 218 KMHIRTATSAAKALSDIISDPNAILSETFYDLAQDVVLPYLDNLKGPSIRGEDYSIFTQL 277
Query: 301 --RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS 358
R+E + E +L TRV+EFIP I SF++ ++ AY +D SVYFD+ +
Sbjct: 278 SQRFEDRFMEDARALNILDADEVTRVTEFIPEIVSFVEQIVQHGFAYATADGSVYFDIAA 337
Query: 359 FP----HYFKL--WGRNEN----------ITQHAVKRSPFDFALWKSAKPGEPWYESAWG 402
F Y +L W RN+ I + KRS DFALWK++K GEP + S WG
Sbjct: 338 FEAAGNQYARLEPWNRNDTALQADGEGALINKTVEKRSKADFALWKASKAGEPSWPSPWG 397
Query: 403 KGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS----QWVNYW 458
GRPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS A+ ++ QWVNY+
Sbjct: 398 LGRPGWHIECSAMASARLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHKGCSHDQWVNYF 457
Query: 459 LHTGHL--RGTDGTRRLR 474
LH GHL +G+ ++ L+
Sbjct: 458 LHMGHLSIQGSKMSKSLK 475
>gi|380019999|ref|XP_003693886.1| PREDICTED: cysteine--tRNA ligase, cytoplasmic-like [Apis florea]
Length = 728
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 232/464 (50%), Gaps = 101/464 (21%)
Query: 20 PKWSLPSGYDTGI-KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P ++ + K+YN +T+ K F+ Q NH+ WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PSWVPPQRKNSSVLKLYNSLTRNKEIFVPQFGNHILWYSCGPTVYDASHMGHARSYMSFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVG 138
IIRR+L YF + + ++TDIDDKII +A +++Y L++K +
Sbjct: 67 IIRRVLSDYFGYDILYVMNITDIDDKIIKRA---RQNY---------------LYEKYIK 108
Query: 139 SIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
N LD I ++ +I + S D D K+Y
Sbjct: 109 E---------NHTLDKILDDAKNVMYIFEDTVKSTIDTD------------------KKY 141
Query: 199 FLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQF 258
L+ I + +K + L +K D K EF++ LL +++D E +
Sbjct: 142 ILQNILCNV-EKAIENLEDAVKLKDED------KMKEFQELLLK---EVRDPLAEWLDKE 191
Query: 259 KDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPP 318
K V +F L + +E E+ + M+ VL P
Sbjct: 192 KGATVTEHSIFTKLSQH--------------------------WEQEFHKDMDFLNVLRP 225
Query: 319 TRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF----PHYF-----KLWGRN 369
TRVSE+IP I FI+ +++ AY S+ SVYFDV +F HY+ + +G
Sbjct: 226 NVLTRVSEYIPEIIEFIKKIIENGIAY-ESNGSVYFDVSTFDKQDKHYYAKLVPEAYGDT 284
Query: 370 ENITQH---------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ + + KRSP DFALWK +K GEPW+ES WG+GRPGWHIECS MAS
Sbjct: 285 LSLQEGEGDLSTLAISEKRSPIDFALWKCSKEGEPWWESPWGRGRPGWHIECSVMASIIC 344
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+HTGG+DLKFPHH+NE AQ+ A+ N S WV Y+LH+GHL
Sbjct: 345 GESLDIHTGGVDLKFPHHDNEIAQAEAYFNNSNWVRYFLHSGHL 388
>gi|320034216|gb|EFW16161.1| cysteinyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
Length = 805
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 164/496 (33%), Positives = 232/496 (46%), Gaps = 91/496 (18%)
Query: 14 ATSCESPKWSLPSGYDTG------IKIYNPITKTKVPFIIQNK--NHLKWYACGPTVYDS 65
A + E P W PS +K++N +T++KVPF+ + N + WYACGPTVYD
Sbjct: 2 AAAREQPPWKQPSPSPESASKLPPLKLWNSLTRSKVPFVPLDPTGNKVTWYACGPTVYDD 61
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFL 125
H+GHA V DI+RR+L YF I ++TD+DDKII +A
Sbjct: 62 AHLGHARNYVSTDILRRLLRDYFKFDVKFIMNITDVDDKIITRARQ-------------- 107
Query: 126 PLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKAN 185
+ L + V S PT IDD ++
Sbjct: 108 ----QHLFMEYVTSHPT---------------------------------IDDSVVETIT 130
Query: 186 SLKEDYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGV 245
S E Y R L L+ + K + A+++K V +G L + D + +
Sbjct: 131 SAYESY----VRKNLPLLEHVPTPKAFPE-AVEIKYGFVLNGGALGGTGKPGDAEAKIKM 185
Query: 246 QIKDQKCEATWQ---FKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNF-- 300
I+ A D F L ++L + L ++R +
Sbjct: 186 HIRTATSAAKALSDIISDPNAMLSETFYDLAQDVVLPYLDNLKGPSIRGEDYSIFTQLSQ 245
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+E + E +L TRV+EFIP I SF++ ++ AY +D SVYFD+ +F
Sbjct: 246 RFEDRFMEDARVLNILDADEVTRVTEFIPEIVSFVEQIVQHGFAYATADGSVYFDIAAFE 305
Query: 361 ----HYFKL--WGRNEN----------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKG 404
Y +L W RN+ I + KRS DFALWK++K GEP + S WG G
Sbjct: 306 AAGNQYARLEPWNRNDTALQADGEGALINKTVEKRSKADFALWKASKAGEPSWPSPWGLG 365
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS----QWVNYWLH 460
RPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS A+ ++ QWVNY+LH
Sbjct: 366 RPGWHIECSAMASARLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHKGCSHDQWVNYFLH 425
Query: 461 TGHL--RGTDGTRRLR 474
GHL +G+ ++ L+
Sbjct: 426 MGHLSIQGSKMSKSLK 441
>gi|384489721|gb|EIE80943.1| cysteinyl-tRNA synthetase [Rhizopus delemar RA 99-880]
Length = 648
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 167/492 (33%), Positives = 242/492 (49%), Gaps = 88/492 (17%)
Query: 15 TSCESPKWSLPSGYDTGI-KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
S + P W P+ + K N +TKTK FI Q+ + WY CGPTVYD+ H+GHA
Sbjct: 2 ASRQQPPWLKPTAKPVPVLKFQNSLTKTKTEFIPQSGRRVTWYNCGPTVYDASHMGHART 61
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFK--- 130
+ +DIIRR+L+ YF + + +VTDIDDKII +A ++Y + K
Sbjct: 62 YLTMDIIRRVLQDYFRYDVLFVQNVTDIDDKIILRAR----------QQYLFGSLKKETQ 111
Query: 131 ILHQKVVGSIPTRGHAVCNVKLDII-RRILEHYFHIHSIVISSVTDIDDKIINKANSLKE 189
L++KV+ KL + +L+ + +S +T + I KA + E
Sbjct: 112 QLNEKVIEQTQEAWSEFAAAKLKKLDESMLQLALNNWPEFVSKMTPEE---IAKATAADE 168
Query: 190 DYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKD 249
+K +I+ L AI+ K + +G + TK E D+LL
Sbjct: 169 KFK---------MIYSALDTSYK---AIEKAKNNLANG-INTK--EAVDQLLD-----SS 208
Query: 250 QKCEATW-QFKDGKVFSD-RVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYF 307
Q +TW + G +D +VF LP Y +E ++F
Sbjct: 209 QDTVSTWLDVRKGSQVNDPKVFRDLPAY--------------------------WEDQFF 242
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HY 362
+ ME V P TRVSE+IP I ++Q ++D Y+ D SVYFD + HY
Sbjct: 243 QDMEALNVRAPDIQTRVSEYIPEIVDYVQKIIDNGYGYV-VDGSVYFDTARYDGHNGHHY 301
Query: 363 FKL--WGRNENI----------TQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHI 410
KL W + + ++ K++ DFALWK++KPGEP ++S W +GRPGWHI
Sbjct: 302 AKLEPWSKGDTALIEDGEGSLGSKLQGKKNSSDFALWKASKPGEPVWDSPWSQGRPGWHI 361
Query: 411 ECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTD 468
ECS MAS G +D+H+GG+DL FPHH+NE AQ+ A + QWVNY+LH GHL G
Sbjct: 362 ECSVMASAVLGQTMDIHSGGVDLAFPHHDNEIAQAEAHFDCHQWVNYFLHAGHLHVEGQK 421
Query: 469 GTRRLRAARFIT 480
++ L+ FIT
Sbjct: 422 MSKSLK--NFIT 431
>gi|392865662|gb|EAS31468.2| cysteine-tRNA ligase [Coccidioides immitis RS]
Length = 839
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 235/511 (45%), Gaps = 97/511 (18%)
Query: 2 SILSQSSLALSYATSCESPKWSLPSGYDTG------IKIYNPITKTKVPFIIQNK--NHL 53
++L S+ + A + E P W PS +K++N +T++KVPF+ + N +
Sbjct: 24 ALLRSFSIFPAMAAAREQPPWKQPSPSPESASKLPPLKLWNSLTRSKVPFVPLDPTGNKV 83
Query: 54 KWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK 113
WYACGPTVYD H+GHA V DI+RR+L YF I ++TD+DDKII +A
Sbjct: 84 TWYACGPTVYDDAHLGHARNYVSTDILRRLLRDYFKFDVKFIMNITDVDDKIITRARQ-- 141
Query: 114 EDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSV 173
+ L + V S PT
Sbjct: 142 ----------------QHLFMEYVTSHPT------------------------------- 154
Query: 174 TDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQKVVRKL---AIDLKKAKVDSGPVL 230
IDD ++ S E Y +R +L + K A+++K V +G L
Sbjct: 155 --IDDSVVETITSAYESY--------VRKNLPLLEHVPIPKAFPEAVEIKYGFVLNGGAL 204
Query: 231 TKCDEFRDELLALGVQIKDQKCEATWQ---FKDGKVFSDRVFISLPLYLILIQVSLLGPL 287
+ D + + I+ A D F L ++L + L
Sbjct: 205 GGTGKPGDAEAKIKMHIRTATSAAKALSDIISDPNAMLSETFYDLAQDVVLPYLDNLKGP 264
Query: 288 TLRTVVFEFLFNFRYELE--YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY 345
++R + E + E +L TRV+EFIP I SF++ ++ AY
Sbjct: 265 SIRGEDYSIFTKLSQRFEDRFMEDARALNILDADEVTRVTEFIPEIVSFVEQIVQHGFAY 324
Query: 346 IGSDHSVYFDVDSFP----HYFKL--WGRNEN----------ITQHAVKRSPFDFALWKS 389
+D SVYFD+ +F Y +L W RN+ I + KRS DFALWK+
Sbjct: 325 ATADGSVYFDIAAFEAAGNQYARLEPWNRNDTALQADGEGALINKAVEKRSKADFALWKA 384
Query: 390 AKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFH 449
+K GEP + S WG GRPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS A+
Sbjct: 385 SKAGEPSWPSPWGPGRPGWHIECSAMASARLGKQMDIHSGGIDLAFPHHDNELAQSEAYW 444
Query: 450 NQS----QWVNYWLHTGHL--RGTDGTRRLR 474
++ QWVNY+LH GHL +G+ ++ L+
Sbjct: 445 HKGCSHDQWVNYFLHMGHLSIQGSKMSKSLK 475
>gi|58393703|ref|XP_320253.2| AGAP012283-PA [Anopheles gambiae str. PEST]
gi|55234373|gb|EAA00242.2| AGAP012283-PA [Anopheles gambiae str. PEST]
Length = 743
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 223/468 (47%), Gaps = 105/468 (22%)
Query: 20 PKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P + +YN +T+ K F+ ++ ++ WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PTWQAPEEKPAPKLYLYNSLTRRKELFVPRDGRNVHWYSCGPTVYDASHMGHARSYISFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLPLIFKILHQKV 136
I+RR+L YF + + + ++TDIDDKII +A N L E Y +K +PL
Sbjct: 67 ILRRVLSDYFGYNVLYVMNITDIDDKIIKRARQNHLYERYLQQSKD--MPL--------- 115
Query: 137 VGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAK 196
R+L+ + + N A + D KT+
Sbjct: 116 -------------------ERLLDDSKEVMATFRE----------NLARTTDADKKTMMD 146
Query: 197 RYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATW 256
R +L V L++ +K+ D G + D+F + + D K
Sbjct: 147 RMLEKLT------AAVDNLSLAVKEG--DEGRIQQAQDQFLQDSKDPLADLLDSK----- 193
Query: 257 QFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVL 316
+ V + +F +LP Y +E + + M VL
Sbjct: 194 --QGSSVTENAIFETLPRY--------------------------WEDAFHKDMAALNVL 225
Query: 317 PPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL----WG 367
P TRVSE++P I ++I+ ++ AY ++ SVYFDV F HY KL +G
Sbjct: 226 QPDVLTRVSEYVPQIVTYIEKIIANGLAY-EANGSVYFDVAGFDRREQHHYAKLVPEAYG 284
Query: 368 RNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
+ + + KRS DFALWKS+K GEPW++S WG+GRPGWHIECSAMA
Sbjct: 285 DAKQLQEGEGDLSIGADRLTEKRSANDFALWKSSKAGEPWWDSPWGRGRPGWHIECSAMA 344
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
S G +D+HTGG+DLKFPHH+NE AQS A ++WV Y+LHTGHL
Sbjct: 345 SDICGDYLDIHTGGVDLKFPHHDNELAQSEAHDGSAEWVKYFLHTGHL 392
>gi|448086782|ref|XP_004196186.1| Piso0_005635 [Millerozyma farinosa CBS 7064]
gi|359377608|emb|CCE85991.1| Piso0_005635 [Millerozyma farinosa CBS 7064]
Length = 778
Score = 231 bits (588), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 238/494 (48%), Gaps = 104/494 (21%)
Query: 16 SCESPKWSLPSG-YDTGI-KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
+ + P+W P YD + KIYN +T+ K F+ N + WY+CGPTVYD H+GHA
Sbjct: 25 AAQQPEWITPRPIYDQPVLKIYNSLTRIKNEFVTLKPNRITWYSCGPTVYDRSHMGHARN 84
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILH 133
V DI RRIL+ YF + I +VTDIDDKII A++ +L
Sbjct: 85 YVATDICRRILQDYFGYNIKFIQNVTDIDDKII-----------IAARQEYL------FE 127
Query: 134 QKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKT 193
Q+++ + V + L ++ L Y + ++ + + K D +T
Sbjct: 128 QEIIN----KYQEVSDKLLASSKKYLSEY------ITKNLPEFNGK----------DIET 167
Query: 194 VAKRYFLRLIFKILHQKVVRKLAIDLKKAK--------VDSGPVLTKCDEFRDELLALGV 245
++ L + L Q KL + LK A+ DSG V +EF ++ + V
Sbjct: 168 EFSKWTESLDVQSLSQNNP-KLPMYLKAARNAFSVIYSKDSGKV--PIEEFTKQIRDVAV 224
Query: 246 QIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELE 305
D++ T V VF LPLY +E
Sbjct: 225 IALDKELGHT-------VNDPSVFRKLPLY--------------------------WEES 251
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH---- 361
Y + M+K VL P+ TRVSE+IP I ++ ++ AY +D SVYFD F +
Sbjct: 252 YNDDMDKLNVLRPSVTTRVSEYIPEIVEYVDKIVQNGFAYATNDGSVYFDTVKFENDPRH 311
Query: 362 -YFKL--W----------GRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGW 408
Y KL W G + KR+ DFALWK++KPGEP + S WG+GRPGW
Sbjct: 312 DYAKLQPWNKGDLSLINDGEGSLSLDNTSKRNAADFALWKASKPGEPSWPSKWGEGRPGW 371
Query: 409 HIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RG 466
HIECS MAS G +D+H+GG+DL FPHH+NE AQS A+ + QW+NY++H GHL +G
Sbjct: 372 HIECSVMASDIGGEVLDIHSGGVDLCFPHHDNELAQSEAYFDNKQWINYFMHNGHLHIQG 431
Query: 467 TDGTRRLRAARFIT 480
++ L+ FIT
Sbjct: 432 QKMSKSLK--NFIT 443
>gi|156405455|ref|XP_001640747.1| predicted protein [Nematostella vectensis]
gi|156227883|gb|EDO48684.1| predicted protein [Nematostella vectensis]
Length = 634
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 230/483 (47%), Gaps = 110/483 (22%)
Query: 20 PKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDI 79
P W+ P G+ +K+YN +T+ K FI N + WY+CGPTVYD+ H+GHA + DI
Sbjct: 7 PSWNQPQGHGE-LKLYNSLTREKNLFIPSNGRRVTWYSCGPTVYDASHMGHARSYITFDI 65
Query: 80 IRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLPLIFKILHQKVV 137
+RR+L+ YF+ + +VTDIDDKII++A N L+E Y+
Sbjct: 66 VRRVLQSYFNYDVFCVMNVTDIDDKIIHRARRNHLQEKYRE------------------E 107
Query: 138 GSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKR 197
S P + L I+ L+ Y + + D D ED K +
Sbjct: 108 NSDPKK-------ILSDIQVALQPY-------VKKMEDTKD----------EDKKNM--- 140
Query: 198 YFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQ 257
F+++I K+ Q KL L+K K D +T+ ELLA A
Sbjct: 141 -FIKIIEKV--QSTCGKLEALLQKGKADDVQAVTQ------ELLADA----SDPLSAWLD 187
Query: 258 FKDGKVFSD-RVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVL 316
K G +D R+F L + +E EY + M VL
Sbjct: 188 SKHGSDVTDHRIFAKLTEF--------------------------WEQEYHKDMAALNVL 221
Query: 317 PPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL------ 365
P T ++E++P + +FI+ ++ AY S+ SVYFD F Y +L
Sbjct: 222 PADILTNITEYVPEVVTFIEKVIANGYAY-ESNGSVYFDTIKFGSSEKHSYARLVPEAVG 280
Query: 366 ------WGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHF 419
G E KRS DFALWK++KPGEP +ES WGKGRPGWH+ECS MA
Sbjct: 281 DLDALAEGEGELSQNLGEKRSERDFALWKASKPGEPSWESPWGKGRPGWHVECSVMARDG 340
Query: 420 FGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRRLRAAR 477
G ++D+ TGG++LKFP H+NE AQS A SQWVNY+LH GHL G ++ L+
Sbjct: 341 LGSKIDIPTGGVNLKFPPHDNELAQSEAHFCVSQWVNYFLHAGHLTIEGCKMSKSLK--N 398
Query: 478 FIT 480
FIT
Sbjct: 399 FIT 401
>gi|299752108|ref|XP_001830705.2| cysteinyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
gi|298409681|gb|EAU91074.2| cysteinyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
Length = 820
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 160/471 (33%), Positives = 232/471 (49%), Gaps = 96/471 (20%)
Query: 25 PSGYDTG-------IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
PS DT + +YN +TK+K + LKWY+CGPTVYD+ H+GHA V
Sbjct: 74 PSASDTKRSEDELKLLLYNSLTKSKTEVTSASARPLKWYSCGPTVYDTSHLGHARNYVTQ 133
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVV 137
D++RRIL YF ++ + +VTDIDDKII + + YFL F+ H ++
Sbjct: 134 DVMRRILTDYFGLNIQYVMNVTDIDDKIIERTR----------QHYFLD-KFRQKHTRLT 182
Query: 138 GSIPTRGHAVCNVKLDIIRRI---LEHYFHIHSIVISSVTDIDD--KIINKANSLKEDYK 192
LD+I + +E Y H H + + T +++ ++K S + +
Sbjct: 183 --------------LDLISEVEEAVEAYCHEHLTGLPNTTSLEELWSNLDKLASDQTWLE 228
Query: 193 TVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCD----EFRDELLALGVQIK 248
T AK RL ++ + R+ A+ +A D G V T+ E ++L + K
Sbjct: 229 TRAKESD-RLNLRLASIRRCRE-ALKAVRAHYDDGVVSTESAHQLIEASSDILGPALNHK 286
Query: 249 DQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFE 308
+ + L P R + +E E+F
Sbjct: 287 SRSQQ------------------------------LDPGLYRRLAAH------WEAEFFS 310
Query: 309 SMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY-IGSDHSVYFDVDSFP-----HY 362
M K V+PP TRV++++P I +FI ++ AY +G + VYFD+ +F Y
Sbjct: 311 DMAKLNVVPPDVVTRVTDYVPEIINFIDRIIQNGYAYSVGGN--VYFDIRAFNQAPGHQY 368
Query: 363 FKLWGRNEN---------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
KL NEN A K+SP DFALWK++KPGEP++ES WG GRPGWHIECS
Sbjct: 369 GKLIPWNENHGGMDDAGDTAPAAHKKSPSDFALWKASKPGEPFWESPWGPGRPGWHIECS 428
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AMA+ G ++D+H+GGIDL FPHH NE AQS A+ WV+ ++HTGHL
Sbjct: 429 AMATAILGEKLDIHSGGIDLLFPHHTNELAQSEAYFKTDSWVDCFIHTGHL 479
>gi|402085868|gb|EJT80766.1| hypothetical protein GGTG_00760 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 806
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 161/487 (33%), Positives = 227/487 (46%), Gaps = 79/487 (16%)
Query: 20 PKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNH--LKWYACGPTVYDSPHIGHAVCNVKL 77
P + P +KIYN +T++K F+ + + WYACGPTVY+ H+GHA V
Sbjct: 3 PSQARPDTQLPQLKIYNSLTRSKDDFVPVDPTGKVVTWYACGPTVYEDAHLGHAKNYVST 62
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVV 137
DIIRRI++ YF H ++TDIDDKII + A++ L FK H
Sbjct: 63 DIIRRIMKDYFGFHVKFAMNITDIDDKIILQ-----------ARKQHLLACFKQDHA--- 108
Query: 138 GSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKR 197
T V + L + HY + ++ S T +
Sbjct: 109 ----TEDDPVSDAVLAEAKAAFRHYIGKNLPLLPSDT--------------------SPE 144
Query: 198 YFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQ 257
F + K KV +L A V G +T D L L I + A
Sbjct: 145 TFSEAVDKTYKDKV--ELPPPADAATVQEGQAVTVAD------LLLRAHIGTARSAAEAL 196
Query: 258 FKDGKV---FSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFG 314
G + F+ + LP L L V E + ++E +FE M
Sbjct: 197 QAPGALPEFFAKTDDVLLPFLDSLHGAELDS--NNHQVFME--LSQKFERRFFEDMNALN 252
Query: 315 VLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH----YFKL--WGR 368
VLPP + TRV+E++P I F++ ++ Y D SVYFD+ SF Y +L W +
Sbjct: 253 VLPPDQLTRVTEYVPQIVRFVEKIVANGFGYATPDGSVYFDIHSFEKAGHSYSRLEPWNK 312
Query: 369 NENITQ----------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
N+ Q ++KRS FALWK++KPGEP + S WG+GRPGWHIECSAMAS
Sbjct: 313 NDRALQADGEGSLSKGKSMKRSENHFALWKASKPGEPAWPSPWGRGRPGWHIECSAMASE 372
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS----QWVNYWLHTGHLRGTDGTRRLR 474
G +D+H+GG+DL+FPHH+NE AQS A+ + QW NY++H G LR R L+
Sbjct: 373 AIGKTMDIHSGGVDLRFPHHDNELAQSEAYLSTPGCSVQWTNYFVHMGQLR----IRGLK 428
Query: 475 AARFITN 481
++ + N
Sbjct: 429 MSKSLKN 435
>gi|189241753|ref|XP_968189.2| PREDICTED: similar to cysteinyl-tRNA synthetase [Tribolium
castaneum]
Length = 734
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 150/465 (32%), Positives = 219/465 (47%), Gaps = 102/465 (21%)
Query: 20 PKWSLPSGYDTGI-KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P WS P + K++N +T+ K F + + WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PPWSAPEASGGPVLKVFNSLTRQKEVFRPISGKKVTWYSCGPTVYDASHMGHARSYITFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVG 138
I+RR+L YF + ++TDIDDKII +A +++Y L ++ VG
Sbjct: 67 ILRRVLADYFGYDIFFVMNITDIDDKIIKRA---RQNY---------------LFERYVG 108
Query: 139 SIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
+ + + KL ++ ++ E N+ D K + ++
Sbjct: 109 EERSLQEVLSDAKL-VLEKLAE---------------------TTQNAFDPDKKQMYEKL 146
Query: 199 FLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQF 258
+ L + + K + K ++ D D L D K AT
Sbjct: 147 LVNLTKSVEELENAVKSGDNTKIENAKKNYIVRSKDPLSDWL--------DCKFGAT--- 195
Query: 259 KDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPP 318
+ + +F SLP + +E E+ + ME +L P
Sbjct: 196 ----ITDNAIFTSLPQH--------------------------WEQEFHKDMEALNILKP 225
Query: 319 TRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP----HYF-----KLWGRN 369
TRVSE+IP I +I ++ Y ++ SVYFDV +F HY+ + +G
Sbjct: 226 HVLTRVSEYIPEIIGYISRIISNGFGY-EANGSVYFDVAAFDKQPNHYYAKLVPEAYGDT 284
Query: 370 ENIT----------QHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHF 419
++ Q K SP DFALWK +KPGEP ++S WGKGRPGWHIECSAMAS
Sbjct: 285 NSLQEGEGDLTTADQRNEKHSPNDFALWKRSKPGEPAWDSPWGKGRPGWHIECSAMASTI 344
Query: 420 FGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG +D+HTGG+DLKFPHH+NE AQS A S+WV Y+LH+GHL
Sbjct: 345 FGDTLDIHTGGVDLKFPHHDNEIAQSEAHFGASEWVKYFLHSGHL 389
>gi|270000778|gb|EEZ97225.1| hypothetical protein TcasGA2_TC011023 [Tribolium castaneum]
Length = 730
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 150/465 (32%), Positives = 219/465 (47%), Gaps = 102/465 (21%)
Query: 20 PKWSLPSGYDTGI-KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P WS P + K++N +T+ K F + + WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PPWSAPEASGGPVLKVFNSLTRQKEVFRPISGKKVTWYSCGPTVYDASHMGHARSYITFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVG 138
I+RR+L YF + ++TDIDDKII +A +++Y L ++ VG
Sbjct: 67 ILRRVLADYFGYDIFFVMNITDIDDKIIKRA---RQNY---------------LFERYVG 108
Query: 139 SIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
+ + + KL ++ ++ E N+ D K + ++
Sbjct: 109 EERSLQEVLSDAKL-VLEKLAE---------------------TTQNAFDPDKKQMYEKL 146
Query: 199 FLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQF 258
+ L + + K + K ++ D D L D K AT
Sbjct: 147 LVNLTKSVEELENAVKSGDNTKIENAKKNYIVRSKDPLSDWL--------DCKFGAT--- 195
Query: 259 KDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPP 318
+ + +F SLP + +E E+ + ME +L P
Sbjct: 196 ----ITDNAIFTSLPQH--------------------------WEQEFHKDMEALNILKP 225
Query: 319 TRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP----HYF-----KLWGRN 369
TRVSE+IP I +I ++ Y ++ SVYFDV +F HY+ + +G
Sbjct: 226 HVLTRVSEYIPEIIGYISRIISNGFGY-EANGSVYFDVAAFDKQPNHYYAKLVPEAYGDT 284
Query: 370 ENIT----------QHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHF 419
++ Q K SP DFALWK +KPGEP ++S WGKGRPGWHIECSAMAS
Sbjct: 285 NSLQEGEGDLTTADQRNEKHSPNDFALWKRSKPGEPAWDSPWGKGRPGWHIECSAMASTI 344
Query: 420 FGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG +D+HTGG+DLKFPHH+NE AQS A S+WV Y+LH+GHL
Sbjct: 345 FGDTLDIHTGGVDLKFPHHDNEIAQSEAHFGASEWVKYFLHSGHL 389
>gi|390357585|ref|XP_001190614.2| PREDICTED: cysteine--tRNA ligase, cytoplasmic-like
[Strongylocentrotus purpuratus]
Length = 745
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 155/486 (31%), Positives = 228/486 (46%), Gaps = 118/486 (24%)
Query: 20 PKWSLPSGYDTG-IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P+W PSG ++ +N +T+ K F+ Q + WY+CGPTVYD+ H+GHA + D
Sbjct: 11 PEWEPPSGAQKAQLRHFNSLTRQKELFVPQEGKRVSWYSCGPTVYDAAHMGHARSYISFD 70
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVG 138
I+RR++ YF+ + ++TD+DDKII +A + L+ + +
Sbjct: 71 ILRRVMTKYFNYDVTYVMNITDVDDKIIKRART------------------NYLYDQYLS 112
Query: 139 SIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
+ + + +V R+ LE Y K+ +A++ K+D
Sbjct: 113 NTTSVEQVLADV-----RQALEPY--------------QAKMNKEASADKKD-------- 145
Query: 199 FLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELL--ALGVQIKDQKCEATW 256
++ KI+++ VR+ L KC+ + E L L + KD E
Sbjct: 146 ---MLMKIINK--VRE--------------ALAKCEAAKSEELKQVLLTEAKDPLAEMLD 186
Query: 257 QFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVL 316
K V +F LP + +E E+ M VL
Sbjct: 187 AQKGCDVSDKSIFSVLPQH--------------------------WEAEFHSDMNALNVL 220
Query: 317 PPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVY-----FDVDSFPHYFKL----WG 367
P TRVSE++P + ++Q ++D Y S+ SVY FD D HY KL +G
Sbjct: 221 PADVLTRVSEYVPEVIDYVQKIIDRGFGY-ESNGSVYFTTSKFDNDDSHHYAKLVPEAYG 279
Query: 368 RNENIT-----------QHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
+ Q K+S DFALWK++KPGEP +ES WG GRPGWHIECSAMA
Sbjct: 280 DQAALAEGEGDLSISPDQLQEKQSANDFALWKNSKPGEPEWESPWGMGRPGWHIECSAMA 339
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRRLR 474
S G +D+HTGG DLKFPHH+NE AQ+ A + WV Y+LH+GHL +G ++ L+
Sbjct: 340 SSILGESMDIHTGGADLKFPHHDNELAQAEAHYGNDDWVRYFLHSGHLTIQGCKMSKSLK 399
Query: 475 AARFIT 480
FIT
Sbjct: 400 --NFIT 403
>gi|324509893|gb|ADY44145.1| Cysteinyl-tRNA synthetase [Ascaris suum]
Length = 574
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 211/398 (53%), Gaps = 47/398 (11%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPT------RGHAVCNVKLDIIRRILEHYFHIHSIVIS 171
T K F+PL K + + G PT GHA + DI+RR+++HYF +
Sbjct: 134 TRKKELFVPLSGKRVKWYICG--PTVYDSSHMGHARAYLSFDILRRVMQHYFGYDVHYVM 191
Query: 172 SVTDIDDKIINKA--NSLKEDY--KTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSG 227
++TDIDDKII +A N L + Y + +K ++I +L A+++ K +VDS
Sbjct: 192 NITDIDDKIIKRARQNHLLDAYMSQEASKMDVTKVIKDVLD-------ALEVFKERVDSE 244
Query: 228 PVLTKCDEFRDELLALGVQIKD-QKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGP 286
K + + +L + V +K +K + + + + + L SL G
Sbjct: 245 TDPDKKNMYDTMILKVNVAVKGLEKALESKEKSSLEAAKNELLTQAKDVLSDWLDSLHGH 304
Query: 287 LTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI 346
VFE L +YE E+ E M K VLPP TRVSE++P + +++Q ++D Y
Sbjct: 305 SVNDHAVFEKLAK-KYENEFHEDMSKLNVLPPDVLTRVSEYVPEVIAYVQKIIDNGYGYT 363
Query: 347 GSDHSVYFDVDSFPH-----YFKL----WGRNENITQHA-------------VKRSPFDF 384
D SVYFD +F Y KL +G NE + ++ KR+P DF
Sbjct: 364 TKDGSVYFDTIAFESKPNHSYAKLVPEAFGDNEQLLKNMRESEGELSMGNLEEKRNPTDF 423
Query: 385 ALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQ 444
ALWKS+K GEP+++S WGKGRPGWHIECSAM+S G ++D+H+GG DLKFPHH+NE AQ
Sbjct: 424 ALWKSSKSGEPFWDSPWGKGRPGWHIECSAMSSQICGSKLDIHSGGFDLKFPHHDNEIAQ 483
Query: 445 SCAFHNQSQWVNYWLHTGHLR--GTDGTRRLRAARFIT 480
A ++ WVNY+LH G LR G ++ L+ FIT
Sbjct: 484 VEAHYDYDNWVNYFLHCGTLRIAGMKMSKSLK--NFIT 519
>gi|195150237|ref|XP_002016061.1| GL10698 [Drosophila persimilis]
gi|194109908|gb|EDW31951.1| GL10698 [Drosophila persimilis]
Length = 741
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 134/344 (38%), Positives = 187/344 (54%), Gaps = 31/344 (9%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RRIL YF + + ++TDIDDKII +A N L E+Y + L
Sbjct: 57 GHARSYISFDILRRILADYFGYNIHYVMNITDIDDKIIKRARQNHLFEEYAGESANLPLD 116
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKC-DEFRDELLALGVQIKDQKCEATWQFKD 260
+ + +VR K D +L K D ++AL + + + +
Sbjct: 117 QLLDHQKEVLVRFQETCAKNTDPDKKVMLDKTLQRMNDAVVALTTAVSQGDEKGIAEKRQ 176
Query: 261 GKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTR 320
+ + I+ L G VFE L F +E ++ M+ +LPP
Sbjct: 177 HYLNEAKDPIAEWL------DGKKGAEINDNAVFESLPRF-WEDQFHNDMKSLNILPPDV 229
Query: 321 ATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL----WGRNEN 371
TRVSE++P I +FIQ ++D AY +++SVYFDV+ F HY KL +G ++
Sbjct: 230 LTRVSEYVPQIVAFIQKIIDNGLAY-AANNSVYFDVNGFDRKEKHHYAKLVPEAYGDTKS 288
Query: 372 ITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+ + + KRS DFALWK++K GEPW++S WG+GRPGWHIECSAMAS F
Sbjct: 289 LQEGEGDLSVAEDRLSEKRSANDFALWKASKAGEPWWDSPWGRGRPGWHIECSAMASDIF 348
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+HTGG+DLKFPHH+NE AQS A N+S+WV Y+LHTGHL
Sbjct: 349 GSTFDIHTGGVDLKFPHHDNELAQSEAAFNESEWVKYFLHTGHL 392
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 80/143 (55%), Gaps = 8/143 (5%)
Query: 20 PKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P + +++YN +T+ K F+ + N++ WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PAWQAPKPAERPKLRLYNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLPLIFKILHQKV 136
I+RRIL YF + + ++TDIDDKII +A N L E+Y + LPL + HQK
Sbjct: 67 ILRRILADYFGYNIHYVMNITDIDDKIIKRARQNHLFEEY--AGESANLPLDQLLDHQK- 123
Query: 137 VGSIPTRGHAVCNVKLDIIRRIL 159
+ R C D ++++
Sbjct: 124 --EVLVRFQETCAKNTDPDKKVM 144
>gi|125807796|ref|XP_001360523.1| GA21073 [Drosophila pseudoobscura pseudoobscura]
gi|122097947|sp|Q291L4.1|SYCC_DROPS RecName: Full=Cysteine--tRNA ligase, cytoplasmic; AltName:
Full=Cysteinyl-tRNA synthetase; Short=CysRS
gi|54635695|gb|EAL25098.1| GA21073 [Drosophila pseudoobscura pseudoobscura]
Length = 741
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/344 (38%), Positives = 187/344 (54%), Gaps = 31/344 (9%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RRIL YF + + ++TDIDDKII +A N L E+Y + L
Sbjct: 57 GHARSYISFDILRRILADYFGYNIHYVMNITDIDDKIIKRARQNHLFEEYAGESANLPLD 116
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKC-DEFRDELLALGVQIKDQKCEATWQFKD 260
+ + +VR K D +L K D ++AL + + + +
Sbjct: 117 QLLGHQKEVLVRFQETCAKNTDPDKKVMLDKTLQRMNDAVVALTTAVSQGDEKGIAEKRQ 176
Query: 261 GKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTR 320
+ + I+ L G VFE L F +E ++ M+ +LPP
Sbjct: 177 HYLNEAKDPIAEWL------DGKKGAEINDNAVFESLPRF-WEDQFHNDMKSLNILPPDV 229
Query: 321 ATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL----WGRNEN 371
TRVSE++P I +FIQ ++D AY +++SVYFDV+ F HY KL +G ++
Sbjct: 230 LTRVSEYVPQIVAFIQKIIDNGLAY-AANNSVYFDVNGFDRKEKHHYAKLVPEAYGDTKS 288
Query: 372 ITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+ + + KRS DFALWK++K GEPW++S WG+GRPGWHIECSAMAS F
Sbjct: 289 LQEGEGDLSVAEDRLSEKRSANDFALWKASKAGEPWWDSPWGRGRPGWHIECSAMASDIF 348
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+HTGG+DLKFPHH+NE AQS A N+S+WV Y+LHTGHL
Sbjct: 349 GSTFDIHTGGVDLKFPHHDNELAQSEAAFNESEWVKYFLHTGHL 392
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 80/143 (55%), Gaps = 8/143 (5%)
Query: 20 PKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P + +++YN +T+ K F+ + N++ WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PAWQAPKPAERPKLRLYNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLPLIFKILHQKV 136
I+RRIL YF + + ++TDIDDKII +A N L E+Y + LPL + HQK
Sbjct: 67 ILRRILADYFGYNIHYVMNITDIDDKIIKRARQNHLFEEY--AGESANLPLDQLLGHQK- 123
Query: 137 VGSIPTRGHAVCNVKLDIIRRIL 159
+ R C D ++++
Sbjct: 124 --EVLVRFQETCAKNTDPDKKVM 144
>gi|328716861|ref|XP_001946257.2| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 1
[Acyrthosiphon pisum]
gi|328716863|ref|XP_003246061.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 2
[Acyrthosiphon pisum]
Length = 723
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 139/347 (40%), Positives = 194/347 (55%), Gaps = 50/347 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL---KEDYKTVAKRYFL 200
GHA + DI+RR+L+ YFH + ++TDIDDKII +A L +E KT +
Sbjct: 57 GHARSYITFDILRRVLKDYFHYDVEYVMNITDIDDKIIKRARQLHLFEEYVKTATDK--- 113
Query: 201 RLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKD 260
+I+ + ++ L DLKK P D+ L A+ +K + Q +
Sbjct: 114 ----QIVQKDIILALG-DLKKDIEQMDP-----DKKVMTLKAI------EKLTSISQLIE 157
Query: 261 GKVFSDRVFISLPLYLILIQV-SLLGPLTLRTV----VFEFLFNFRYELEYFESMEKFGV 315
G D I L L I + + L L V +FE L F +E + +M +
Sbjct: 158 GSSLDD---IKLALNEIKDPLGAYLDTLNSEDVPDNSIFESLPRF-WESNFHSNMSSLNI 213
Query: 316 LPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL----W 366
LPP + +RVSE++P ++I+T++ AY S+ SVYFDV +F HY KL +
Sbjct: 214 LPPDKLSRVSEYVPETIAYIETIIKNGYAY-ESNGSVYFDVAAFDSQPIHHYAKLVPEAY 272
Query: 367 GRNE-------NITQHAV--KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
G ++ ++T AV KRSP DFALWK +K GEPW++S WGKGRPGWHIECS MAS
Sbjct: 273 GDSKSLQDGEGDLTTSAVNEKRSPNDFALWKKSKKGEPWWDSPWGKGRPGWHIECSVMAS 332
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+HTGGIDLKFPHH+NE AQ+ A++N +WV Y+LH+GHL
Sbjct: 333 CILGQTLDIHTGGIDLKFPHHDNEIAQAEAYYNNEEWVRYFLHSGHL 379
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Query: 20 PKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P WS DT +K++N +T+ K FI +N N + WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PAWSSDKMSDTPRLKLFNSLTRKKEIFIPKNGNKVHWYSCGPTVYDASHMGHARSYITFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKANSL 112
I+RR+L+ YFH + ++TDIDDKII +A L
Sbjct: 67 ILRRVLKDYFHYDVEYVMNITDIDDKIIKRARQL 100
>gi|242024681|ref|XP_002432755.1| Cysteinyl-tRNA synthetase, putative [Pediculus humanus corporis]
gi|212518240|gb|EEB20017.1| Cysteinyl-tRNA synthetase, putative [Pediculus humanus corporis]
Length = 530
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 100/183 (54%), Positives = 126/183 (68%), Gaps = 4/183 (2%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+YELE+F++++ VL PT RVS+ IPHI FI ++D +QAY+ + VYFD SF
Sbjct: 131 KYELEFFKNLKDLNVLSPTFVLRVSDHIPHIIDFIYKIVDKRQAYVSKEGCVYFDTASFG 190
Query: 361 HYFKLWG---RNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL N + + K+S DF LWK+AKPGEP+++S WG GRPGWHIECSAMAS
Sbjct: 191 KYGKLNPIPLENSDPVRIG-KKSYLDFTLWKAAKPGEPFWDSPWGNGRPGWHIECSAMAS 249
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAAR 477
FG ++DLH+GGIDLKFPHHENEEAQSC++H+ QWVNYWLH+G L D
Sbjct: 250 EIFGSKMDLHSGGIDLKFPHHENEEAQSCSYHDCDQWVNYWLHSGQLMIDDEKMSKSLNN 309
Query: 478 FIT 480
FIT
Sbjct: 310 FIT 312
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 75/106 (70%)
Query: 22 WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
W P+G++T IKIYN I KVP I+ NKN +KWY CGPTVY+S H+GHA V+ DIIR
Sbjct: 31 WIKPAGFETDIKIYNKIKNEKVPLILLNKNFVKWYLCGPTVYNSSHVGHASTYVRFDIIR 90
Query: 82 RILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
RILE F I +V +TDIDDKII KAN L ++KT+AK+Y L
Sbjct: 91 RILEQNFGIRPVVALGITDIDDKIIKKANLLSTNFKTLAKKYELEF 136
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 40/59 (67%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRL 202
GHA V+ DIIRRILE F I +V +TDIDDKII KAN L ++KT+AK+Y L
Sbjct: 78 GHASTYVRFDIIRRILEQNFGIRPVVALGITDIDDKIIKKANLLSTNFKTLAKKYELEF 136
>gi|350414715|ref|XP_003490396.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 2
[Bombus impatiens]
Length = 721
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 189/340 (55%), Gaps = 33/340 (9%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RR+L YF + + ++TDIDDKII +A N L E Y + + + L
Sbjct: 57 GHARSYISFDILRRVLSDYFGYDILYVMNITDIDDKIIKRARQNYLYEKY--IEENHTLD 114
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDG 261
I K V + D K D+ KC E L V+ + E + KD
Sbjct: 115 EILD--DAKYVMCIFEDTVKNTNDTDK---KC---MLEALLCNVEKAIENLENVVKLKDE 166
Query: 262 KVFSDRVFISL-----PLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVL 316
+ + + L PL L + G +F L +E+E+ + M+ +L
Sbjct: 167 EKMKEYQELLLKEARDPLAEWLDKTK--GATVTEHSIFTKLSQ-HWEMEFHKDMDSLNIL 223
Query: 317 PPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF----PHYF-----KLWG 367
P TRVSE+IP I +FI+ +++ AY S+ SVYFDV +F HY+ + +G
Sbjct: 224 RPNVLTRVSEYIPEIITFIEKIIENGIAY-ESNGSVYFDVATFDKQDKHYYAKLVPEAYG 282
Query: 368 ---RNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQV 424
R+ + T+ + KRSP DFALWK +K GEPW+ES WGKGRPGWHIECS MAS G +
Sbjct: 283 DTSRDLSGTKVSEKRSPTDFALWKCSKEGEPWWESPWGKGRPGWHIECSVMASIICGESL 342
Query: 425 DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
D+HTGGIDLKFPHH+NE AQ+ A++N S WV Y+LH+GHL
Sbjct: 343 DIHTGGIDLKFPHHDNEMAQAEAYYNNSNWVKYFLHSGHL 382
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
Query: 20 PKWSLPSGYDTGI-KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P + + K+YN +T+ K F+ Q NH+ WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PSWMPPERKSSSVLKLYNSLTREKEIFVPQFGNHILWYSCGPTVYDASHMGHARSYISFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY 116
I+RR+L YF + + ++TDIDDKII +A N L E Y
Sbjct: 67 ILRRVLSDYFGYDILYVMNITDIDDKIIKRARQNYLYEKY 106
>gi|195382430|ref|XP_002049933.1| GJ21863 [Drosophila virilis]
gi|194144730|gb|EDW61126.1| GJ21863 [Drosophila virilis]
Length = 741
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/363 (37%), Positives = 194/363 (53%), Gaps = 69/363 (19%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS--LKEDYKTVAKRYFLR 201
GHA + DI+RRIL +YF + + ++TDIDDKII +A L E Y + A++ L
Sbjct: 57 GHARSYISFDILRRILANYFGYNIHYVMNITDIDDKIIKRARQYHLYEQYASGAEQLPLE 116
Query: 202 LIF----KILHQKVV---------RKLAID-LKKAKVDSGPVLTKC--DEFRDELLALGV 245
+ ++L+Q V +K+ ++ + + +D+ LT+ DE+ +
Sbjct: 117 QLLNEQKEVLNQLQVKCDKNTDPDKKVMLEKMLQRMIDALEALTQAVSSGNADEIAKMRC 176
Query: 246 QIKDQKCEATWQFKDGK----VFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFR 301
+ + ++ DGK V + VF +LP Y
Sbjct: 177 HYLAEAKDPIAEWLDGKKGAHVNDNTVFEALPRY-------------------------- 210
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP- 360
+E + M+ +LPP TRVSE++P I +FIQ ++D AY ++ SVYFDV+ F
Sbjct: 211 WEDHFHNDMKSLNILPPDVLTRVSEYVPQIVAFIQRIIDNGLAY-EANGSVYFDVNGFDK 269
Query: 361 ----HYFKL----WGRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAW 401
HY KL +G ++ + + KRSP DFALWK++K GEPW++S W
Sbjct: 270 REKHHYAKLVPEAYGDTTSLQEGEGDLSVTADRLSEKRSPNDFALWKASKAGEPWWDSPW 329
Query: 402 GKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHT 461
G GRPGWHIECSAMAS FG D+HTGG+DLKFPHH+NE AQS A +S+WV Y+LHT
Sbjct: 330 GHGRPGWHIECSAMASDIFGSIFDIHTGGVDLKFPHHDNELAQSEAAFGESEWVKYFLHT 389
Query: 462 GHL 464
GHL
Sbjct: 390 GHL 392
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 75/121 (61%), Gaps = 5/121 (4%)
Query: 20 PKWSLPS-GYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P+ +++YN +T+ K F+ + N++KWY+CGPTVYD+ H+GHA + D
Sbjct: 7 PAWQAPTTSARPQLRLYNSLTRQKEEFVPLSGNNVKWYSCGPTVYDASHMGHARSYISFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKANS--LKEDYKTVAKRYFLPLIFKILHQKV 136
I+RRIL +YF + + ++TDIDDKII +A L E Y + A++ LPL + QK
Sbjct: 67 ILRRILANYFGYNIHYVMNITDIDDKIIKRARQYHLYEQYASGAEQ--LPLEQLLNEQKE 124
Query: 137 V 137
V
Sbjct: 125 V 125
>gi|350414712|ref|XP_003490395.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 1
[Bombus impatiens]
Length = 727
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 188/346 (54%), Gaps = 39/346 (11%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RR+L YF + + ++TDIDDKII +A N L E Y + + + L
Sbjct: 57 GHARSYISFDILRRVLSDYFGYDILYVMNITDIDDKIIKRARQNYLYEKY--IEENHTLD 114
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDG 261
I K V + D K D+ KC E L V+ + E + KD
Sbjct: 115 EILD--DAKYVMCIFEDTVKNTNDTDK---KC---MLEALLCNVEKAIENLENVVKLKDE 166
Query: 262 KVFSDRVFISL-----PLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVL 316
+ + + L PL L + G +F L +E+E+ + M+ +L
Sbjct: 167 EKMKEYQELLLKEARDPLAEWLDKTK--GATVTEHSIFTKLSQ-HWEMEFHKDMDSLNIL 223
Query: 317 PPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF----PHYF-----KLWG 367
P TRVSE+IP I +FI+ +++ AY S+ SVYFDV +F HY+ + +G
Sbjct: 224 RPNVLTRVSEYIPEIITFIEKIIENGIAY-ESNGSVYFDVATFDKQDKHYYAKLVPEAYG 282
Query: 368 RNENI---------TQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
++ T+ + KRSP DFALWK +K GEPW+ES WGKGRPGWHIECS MAS
Sbjct: 283 DTSSLQEGEGDLSGTKVSEKRSPTDFALWKCSKEGEPWWESPWGKGRPGWHIECSVMASI 342
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+HTGGIDLKFPHH+NE AQ+ A++N S WV Y+LH+GHL
Sbjct: 343 ICGESLDIHTGGIDLKFPHHDNEMAQAEAYYNNSNWVKYFLHSGHL 388
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
Query: 20 PKWSLPSGYDTGI-KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P + + K+YN +T+ K F+ Q NH+ WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PSWMPPERKSSSVLKLYNSLTREKEIFVPQFGNHILWYSCGPTVYDASHMGHARSYISFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY 116
I+RR+L YF + + ++TDIDDKII +A N L E Y
Sbjct: 67 ILRRVLSDYFGYDILYVMNITDIDDKIIKRARQNYLYEKY 106
>gi|157105607|ref|XP_001648945.1| cysteinyl-tRNA synthetase [Aedes aegypti]
gi|108880067|gb|EAT44292.1| AAEL004345-PA [Aedes aegypti]
Length = 735
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 138/349 (39%), Positives = 193/349 (55%), Gaps = 43/349 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY--KTVAKRYF 199
GHA + DI+RR+L YF + + + ++TDIDDKII +A N L E Y +T +
Sbjct: 58 GHARSYISFDILRRVLTDYFGYNVLYVMNITDIDDKIIKRARQNYLYERYVERTTSLETL 117
Query: 200 LRLIFKILH--QKVVRKLAIDLKKAKVDSGPVLTKCDEFRDEL-LALGVQIKDQKCEATW 256
L +++ Q + K KKA ++ +L K D L +A+ + + EA
Sbjct: 118 LDDNKEVMEAFQGNLSKTTDPDKKAMMER--MLEKLTAAVDNLTIAVKTGEEGKVKEAQS 175
Query: 257 QF-KDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGV 315
+F +D K PL +L + G +FE L + +E E+ + M V
Sbjct: 176 RFLEDSKD---------PLSDLLDKKE--GASVNENSIFETLPRY-WEDEFHKDMNALNV 223
Query: 316 LPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF----PHYF-----KLW 366
L P TRVSE++P I +IQ ++D AY ++ SVYFDV F HY+ + +
Sbjct: 224 LAPDVLTRVSEYVPQIVEYIQKIIDNGLAY-EANGSVYFDVAGFDKREKHYYAKLVPEAY 282
Query: 367 GRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAM 415
G +++ + + KRSP DFALWK++K GEPW+ S WGKGRPGWHIECSAM
Sbjct: 283 GDAKSLQEGEGDLSTTEDRLSEKRSPNDFALWKNSKAGEPWWNSPWGKGRPGWHIECSAM 342
Query: 416 ASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AS G +D+HTGG+DLKFPHH+NE AQS A N S+WV Y+LHTGHL
Sbjct: 343 ASDICGDYLDIHTGGVDLKFPHHDNELAQSEAHDNSSEWVKYFLHTGHL 391
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%), Gaps = 4/101 (3%)
Query: 20 PKWSLP--SGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
P W P S + +++YN +T+ K F+ ++ ++KWY+CGPTVYD+ H+GHA +
Sbjct: 7 PTWQTPVQSSEEPKLRLYNSLTRQKELFVPKDGKNVKWYSCGPTVYDASHMGHARSYISF 66
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY 116
DI+RR+L YF + + + ++TDIDDKII +A N L E Y
Sbjct: 67 DILRRVLTDYFGYNVLYVMNITDIDDKIIKRARQNYLYERY 107
>gi|255728717|ref|XP_002549284.1| cysteinyl-tRNA synthetase [Candida tropicalis MYA-3404]
gi|240133600|gb|EER33156.1| cysteinyl-tRNA synthetase [Candida tropicalis MYA-3404]
Length = 786
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 136/370 (36%), Positives = 191/370 (51%), Gaps = 41/370 (11%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII--------------NKANSLKE 189
GHA V DI RRIL+ YF H I +VTDIDDKII N+ + +
Sbjct: 87 GHARNYVSTDISRRILQDYFGYHINFIQNVTDIDDKIIIAARQQYLFEEKLTNQYKDIND 146
Query: 190 DYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVD-SGPVLTKCDEFRDELLALGVQIK 248
D K +K Y K +K + + DL+K ++ + + E E L + IK
Sbjct: 147 DLKLKSKEYL-----KFYVEKNLPEFNGDLEKDFINWTNNGIPNMAELVKEKPKLPMFIK 201
Query: 249 DQKCEATWQFKDGKVFS-DRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYF 307
K + K+ S D + + G +F+ L ++ +E Y
Sbjct: 202 AAKLAHETIYNSNKINSIDEYLTKIKDVAMPHLDKEFGATVTDPQIFKKLPSY-WEKRYN 260
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH----YF 363
E M + VLPP+ TRVSE++P I F+ +++ AY D SVYFD + H Y
Sbjct: 261 EDMARLNVLPPSITTRVSEYVPDIIEFVDKIIENGYAYATEDGSVYFDTVKYEHSKHEYA 320
Query: 364 KL--WGRNE---------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
KL W + + +++ KRS DFALWK++KPGEP ++S WGKGRPGWHIEC
Sbjct: 321 KLQPWSKGDLSLINDGEGSLSTGNTKRSSADFALWKASKPGEPSWDSKWGKGRPGWHIEC 380
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGT 470
S MAS G +D+H+GGIDL FPHH+NE AQS A+ + QW+NY++H GHL +G +
Sbjct: 381 SVMASDIGGETLDIHSGGIDLCFPHHDNELAQSEAYFDNKQWINYFMHNGHLHIQGQKMS 440
Query: 471 RRLRAARFIT 480
+ L+ FIT
Sbjct: 441 KSLK--NFIT 448
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 17/126 (13%)
Query: 16 SCESPKWSLPSGYDTG---IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAV 72
+ + P+W P D +K+YN +T++K F + WY+CGPTVYD H+GHA
Sbjct: 31 TVKQPEWFEPENKDNQKPTLKLYNSLTRSKNEFHPIKPGQITWYSCGPTVYDHSHMGHAR 90
Query: 73 CNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII--------------NKANSLKEDYKT 118
V DI RRIL+ YF H I +VTDIDDKII N+ + +D K
Sbjct: 91 NYVSTDISRRILQDYFGYHINFIQNVTDIDDKIIIAARQQYLFEEKLTNQYKDINDDLKL 150
Query: 119 VAKRYF 124
+K Y
Sbjct: 151 KSKEYL 156
>gi|428186110|gb|EKX54961.1| cysteinyl-tRNA synthetase [Guillardia theta CCMP2712]
Length = 677
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 135/342 (39%), Positives = 175/342 (51%), Gaps = 81/342 (23%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V D+IRRILE++F + ++TD+DDKII +A +R L I
Sbjct: 40 GHARTYVAFDVIRRILENFFGFDIFCVMNITDVDDKIILRA-----------RRNHLLKI 88
Query: 204 FKI----LHQKVVRKLAIDLKKA--KVDSGPVL-TKCDEFRDELLALGVQIKDQKCEATW 256
+K L + + KL DL K V G +L +K DE + G +I+DQ+
Sbjct: 89 YKESCPPLAKDKLAKLEEDLAKETKSVRVGDLLASKLDEEQ------GAEIRDQQI---- 138
Query: 257 QFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVL 316
F+ F YE EY E M+ GV
Sbjct: 139 -FRSHAAF-------------------------------------YEQEYHEDMKSLGVR 160
Query: 317 PPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP--HYFKLWGRNENITQ 374
PP TRV+EFIP I S+IQ ++D AY + SVYFD+ SF H ++ NE
Sbjct: 161 PPDVLTRVTEFIPQIVSYIQKIIDNGFAY-EAQGSVYFDIRSFSKTHSYRKLSWNEASML 219
Query: 375 HAV------------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGG 422
A+ KR+ FDFALWK +KPGEP +ES WG GRPGWHIECS MAS G
Sbjct: 220 SALAEAEGALSSGEGKRTEFDFALWKKSKPGEPSWESPWGGGRPGWHIECSVMASEILGD 279
Query: 423 QVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
+D+H GGIDL FPHH+NE AQ+ A++ QWVNY+LH+GHL
Sbjct: 280 TLDIHGGGIDLCFPHHDNELAQAEAYYGHQQWVNYFLHSGHL 321
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ + N +T KV F ++ N ++WY CGPTVYDS H+GHA V D+IRRILE++F
Sbjct: 3 LMVSNTLTSGKVEFKPKDGNTVRWYICGPTVYDSSHLGHARTYVAFDVIRRILENFFGFD 62
Query: 92 SIVISSVTDIDDKIINKA--NSLKEDYK 117
+ ++TD+DDKII +A N L + YK
Sbjct: 63 IFCVMNITDVDDKIILRARRNHLLKIYK 90
>gi|170049267|ref|XP_001855148.1| cysteinyl-tRNA synthetase [Culex quinquefasciatus]
gi|167871109|gb|EDS34492.1| cysteinyl-tRNA synthetase [Culex quinquefasciatus]
Length = 738
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 138/352 (39%), Positives = 199/352 (56%), Gaps = 51/352 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRL- 202
GHA + DI+RR+L YF + + + ++TDIDDKII +A +++Y + +RY R
Sbjct: 58 GHARSYISFDILRRVLTDYFGFNVLYVMNITDIDDKIIKRA---RQNY--LYERYVERTS 112
Query: 203 -IFKILHQ--KVVRKLAIDL-------KKAKVDSGPVLTKCDEFRDEL-LALGVQIKDQK 251
+ K+L +V+ +L KKA ++ +L + D L +A+ +++
Sbjct: 113 SLEKLLEDNVEVMESFRGNLGQTTDPDKKAMMER--MLERLTASVDNLTIAVKSGAEEKV 170
Query: 252 CEATWQF-KDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESM 310
EA QF +D + PL +L + G +FE L + +E E+ + M
Sbjct: 171 KEAQKQFLEDSRD---------PLADLLDRKE--GSSVSENSIFETLPRY-WEDEFHKDM 218
Query: 311 EKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL 365
+ VLPP TRVSE++P I +IQ +++ AY ++ SVYFDV F HY KL
Sbjct: 219 DALNVLPPDVLTRVSEYVPQIVEYIQKIIENGLAY-EANGSVYFDVAGFDAREKHHYAKL 277
Query: 366 ----WGRNENIT---------QHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
+G +++ Q + KRS DFALWK +K GEPW++S WG+GRPGWHIEC
Sbjct: 278 VPEAYGDAKSLQEGEGDLSGDQSSEKRSANDFALWKCSKAGEPWWDSPWGRGRPGWHIEC 337
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
SAMAS G +D+HTGG+DLKFPHH+NE AQS A N S+WV Y+LHTGHL
Sbjct: 338 SAMASDICGDFLDIHTGGVDLKFPHHDNELAQSEAHDNSSEWVKYFLHTGHL 389
>gi|378730109|gb|EHY56568.1| cysteinyl-tRNA synthetase [Exophiala dermatitidis NIH/UT8656]
Length = 829
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 197/377 (52%), Gaps = 47/377 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS--LKEDYKTVAK----- 196
GHA V DIIRRIL YFH + ++TD+DDKII +A L ++YK+ +
Sbjct: 81 GHARNYVTTDIIRRILRDYFHFKVRFVMNITDVDDKIILRARQRHLYDEYKSKHRYIDEQ 140
Query: 197 -RYFLRLIFKILHQKVVRKLA-------------IDLKKAKVDSGPVLTKCDEFRDELLA 242
R +R + QK ++++ I+ + +G L + D+
Sbjct: 141 VRQDVRQAWHYYVQKNLKRIGPKTLLTPETFDGVIEQFYGDILAGGSLEPGTKPGDKEAK 200
Query: 243 LGVQIKDQKCEATWQFKDGKVFSDRVF---ISLPLYLILIQVSLLGPLTLRTVVFEFLFN 299
+ + I + A +D K+ + F +S P+ L+L + VF L
Sbjct: 201 VKMHINTARTTAKALLQDPKMLTPHEFYNRVSDPMCLVLDEQYGKTIRGDDYAVFTKLTK 260
Query: 300 FRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF 359
YE +F+ M V+ P RV+E+ I F++ ++D AY +D SVYFD+ +F
Sbjct: 261 -EYENRFFQDMHDLNVMDPDDIVRVTEYGKEIAEFVKKIVDKGLAYRTADGSVYFDIKAF 319
Query: 360 PH----YFKL--WGRNENITQ-----------HAVKRSPFDFALWKSAKPGEPWYESAWG 402
Y +L W RN+ Q +VKRSP DFALWK++KPGEP ++S WG
Sbjct: 320 EARGYPYARLEPWNRNDAELQADGEGALSQKSESVKRSPADFALWKASKPGEPSWDSEWG 379
Query: 403 KGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF---HNQSQWVNYWL 459
GRPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS AF + QWVNY+L
Sbjct: 380 PGRPGWHIECSAMASEKLGEQMDIHSGGIDLAFPHHDNELAQSEAFWADGSPRQWVNYFL 439
Query: 460 HTGHL--RGTDGTRRLR 474
H GHL +G+ ++ L+
Sbjct: 440 HMGHLSIQGSKMSKSLK 456
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 70/103 (67%), Gaps = 4/103 (3%)
Query: 20 PKWSLPSG--YDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
P W++P+G + +K+YN +T++KVPFI H+KWYACGPTVYD H+GHA V
Sbjct: 30 PTWTMPTGTTHQPDLKVYNSLTRSKVPFIPIEPEHIKWYACGPTVYDDAHLGHARNYVTT 89
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKANS--LKEDYKT 118
DIIRRIL YFH + ++TD+DDKII +A L ++YK+
Sbjct: 90 DIIRRILRDYFHFKVRFVMNITDVDDKIILRARQRHLYDEYKS 132
>gi|156848081|ref|XP_001646923.1| hypothetical protein Kpol_2000p30 [Vanderwaltozyma polyspora DSM
70294]
gi|156117605|gb|EDO19065.1| hypothetical protein Kpol_2000p30 [Vanderwaltozyma polyspora DSM
70294]
Length = 769
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 141/373 (37%), Positives = 193/373 (51%), Gaps = 49/373 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY-KTVAKRYFL 200
GHA V +DI RRIL+ YF + + +VTDIDDKII +A N L E+Y K++
Sbjct: 77 GHARNYVSIDINRRILQDYFGYNINFVQNVTDIDDKIILRARQNHLFEEYVKSIDGDISN 136
Query: 201 RLIFKI---LHQKVVRKLAIDLKKA---------KVDSGPVLTKCDEFRDELLALGVQIK 248
+I KI L Q + + L K+ +VD + + +F + A+ IK
Sbjct: 137 DVISKIESSLFQYIEKNLKQSSIKSINDFENWYKQVDVESMKNEDPKFPMHITAVQNAIK 196
Query: 249 DQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFE 308
++ F F + L+ + LG +F L + +E +Y
Sbjct: 197 ALNDPSSQDF----------FNLVKDVLVPVLDKELGSSINHPEIFRKLPAY-WEHQYDN 245
Query: 309 SMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYF 363
M K VLPP TRVSE++P I F++ ++ AY D SVYFD +F Y
Sbjct: 246 DMAKLNVLPPNVTTRVSEYVPEIIEFVEKIISNGYAYAADDGSVYFDTQNFDTSKDHSYA 305
Query: 364 KL--WGRN------------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWH 409
K W + N + K+SP DFALWK++KPGEP +ES WGKGRPGWH
Sbjct: 306 KCQPWNKGHLDLINDAEGSLSNFSNTNGKKSPSDFALWKASKPGEPEWESPWGKGRPGWH 365
Query: 410 IECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGT 467
IECS MAS G +D+H+GGIDL FPHH+NE AQS A + +QW+NY+LHTGHL G
Sbjct: 366 IECSVMASDILGQNIDIHSGGIDLAFPHHDNELAQSEAHFDNNQWINYFLHTGHLHIEGQ 425
Query: 468 DGTRRLRAARFIT 480
++ L+ FIT
Sbjct: 426 KMSKSLK--NFIT 436
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 72/119 (60%), Gaps = 6/119 (5%)
Query: 4 LSQSSLALSYATSCESPKWSLPS---GYDTGIKIYNPITKTKVPFIIQN-KNHLKWYACG 59
+ + +++ + PKW P + +K+YN +T++K FI ++ + WY+CG
Sbjct: 8 ICKKNMSTATGAKVTQPKWWKPEMDLSKKSVLKVYNTLTRSKEEFIPRSGTKEVSWYSCG 67
Query: 60 PTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY 116
PTVYD+ H+GHA V +DI RRIL+ YF + + +VTDIDDKII +A N L E+Y
Sbjct: 68 PTVYDASHMGHARNYVSIDINRRILQDYFGYNINFVQNVTDIDDKIILRARQNHLFEEY 126
>gi|401417272|ref|XP_003873129.1| putative cysteinyl-tRNA synthetase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489357|emb|CBZ24616.1| putative cysteinyl-tRNA synthetase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 784
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/352 (38%), Positives = 192/352 (54%), Gaps = 38/352 (10%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRY--F 199
GHA + DIIRRI+E YF I ++TDIDDKII +A N L +D+K R+
Sbjct: 75 GHARAYLTFDIIRRIMEDYFGYSVIYQVNITDIDDKIIKRARVNKLLDDFKEGELRHSDV 134
Query: 200 LRLIFKILHQKVVRKLAIDLKKAKV-----DSGPVLTKCDEFRDELLALGVQIKDQKCEA 254
+L+ + ++ +KA + D K D R+E + L VQ+K+ +
Sbjct: 135 AKLMAFTTEAVAAAESGLEKRKAALLEPITDGANSRAKAD--REEKM-LEVQLKESQLAE 191
Query: 255 TWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFN---FRYELEYFESME 311
T K + F +L + LL + +V + +F +YE +FE M+
Sbjct: 192 T---KVKIAAAKDDFAALFAAASGVNGDLLDERSGHSVSDQQIFEDHARKYERAFFEDMQ 248
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH----YFKLW- 366
+ G+ P TRV+E++P + F+Q ++D AY+G + SV+FD +++ Y KL
Sbjct: 249 RLGIREPDIVTRVTEYVPQVVEFVQKIIDNGFAYVG-ETSVFFDTEAYIRAGHDYPKLKP 307
Query: 367 GRNENITQHAV--------------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
G + N T+ + KRSP DFALWK +KPGEP + S WG+GRPGWHIEC
Sbjct: 308 GGDRNTTEDEMAEGEGVLSKGVEGEKRSPNDFALWKFSKPGEPRWSSPWGEGRPGWHIEC 367
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
S MAS G +D+H+GG DLKFPHH+NE AQS A + SQWVNY+LH GHL
Sbjct: 368 SVMASDILGENMDIHSGGWDLKFPHHDNECAQSEACNLHSQWVNYFLHCGHL 419
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P D G+K+ N +T++ F ++ ++WY CGPTVYD H+GHA + D
Sbjct: 25 PTWYPPVKLDGNGLKVMNSLTESLEDFAPRDGRVVRWYTCGPTVYDLSHMGHARAYLTFD 84
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRY 123
IIRRI+E YF I ++TDIDDKII +A N L +D+K R+
Sbjct: 85 IIRRIMEDYFGYSVIYQVNITDIDDKIIKRARVNKLLDDFKEGELRH 131
>gi|195122821|ref|XP_002005909.1| GI18835 [Drosophila mojavensis]
gi|193910977|gb|EDW09844.1| GI18835 [Drosophila mojavensis]
Length = 740
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 139/355 (39%), Positives = 186/355 (52%), Gaps = 53/355 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS--LKEDYKTVAKRYFLR 201
GHA + DI+RRIL YF + + ++TDIDDKII +A L E Y T A + L
Sbjct: 57 GHARSYISFDILRRILADYFGYNIHYVMNITDIDDKIIKRARQYHLFEQYATAAAQLPLE 116
Query: 202 LIFKILHQKVVRKLAIDLK---KAKVDSGPVLTKC-DEFRDELLALG--------VQIKD 249
+ QK V L + +K D +L K D + L +I
Sbjct: 117 QLLN--EQKEVLSL-LQVKCDINTDADKKVMLEKMLQRMNDAVEGLTKAVSTGNEAEITK 173
Query: 250 QKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFES 309
+C + KD + +L Q G VFE L F +E ++
Sbjct: 174 MRCHYLAEAKD----------PIAEWLDGKQ----GAHVNDNSVFEALPRF-WEDKFHND 218
Query: 310 MEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFK 364
M+ +LPP TRVSE++P I +FIQ ++D AY ++ SVYFDV+ F HY K
Sbjct: 219 MKSLNILPPDVLTRVSEYVPQIVAFIQRIIDNGLAY-EANGSVYFDVNGFDKRDKHHYAK 277
Query: 365 L----WGRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWH 409
L +G ++ + + KRS DFALWK++K GEPW++S WG+GRPGWH
Sbjct: 278 LVPEAYGDTASLQEGEGDLSVTEDRLSEKRSANDFALWKASKAGEPWWDSPWGRGRPGWH 337
Query: 410 IECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
IECSAMAS FG D+HTGG+DLKFPHH+NE AQS A +S+WV Y+LHTGHL
Sbjct: 338 IECSAMASDIFGSIFDIHTGGVDLKFPHHDNELAQSEAAFGESEWVKYFLHTGHL 392
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 83/143 (58%), Gaps = 8/143 (5%)
Query: 20 PKWSLP-SGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P + +K+YN +T+ K F+ + N++KWY+CGPTVYD+ H+GHA + D
Sbjct: 7 PVWQAPKASTRPQLKLYNSLTRQKEEFVPLDGNNVKWYSCGPTVYDASHMGHARSYISFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKANS--LKEDYKTVAKRYFLPLIFKILHQKV 136
I+RRIL YF + + ++TDIDDKII +A L E Y T A + LPL + QK
Sbjct: 67 ILRRILADYFGYNIHYVMNITDIDDKIIKRARQYHLFEQYATAAAQ--LPLEQLLNEQKE 124
Query: 137 VGSIPTRGHAVCNVKLDIIRRIL 159
V S+ C++ D ++++
Sbjct: 125 VLSLL---QVKCDINTDADKKVM 144
>gi|403216240|emb|CCK70737.1| hypothetical protein KNAG_0F00680 [Kazachstania naganishii CBS
8797]
Length = 770
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/373 (38%), Positives = 198/373 (53%), Gaps = 48/373 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA V +DI RRI+ YF + +VTDIDDKII +A N L E Y++ +
Sbjct: 77 GHARNYVSIDINRRIMSDYFGYDINFVQNVTDIDDKIILRARHNHLFEKYESSVEEVTPA 136
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKC-----------DEFRDELLALGVQIKDQ 250
+I +KV LA ++K SG V T ++ + E + +
Sbjct: 137 VI-----EKVKAALAQYVEKNLPSSGDVSTIAQLEAWLKTVDFEKMKQENPKFSMHV--T 189
Query: 251 KCEATWQFKDGKVFSDRVFISL---PLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYF 307
+ T + K F SL L +L + + G L +F L + +E ++
Sbjct: 190 AVQNTLTALESKQAEKSTFFSLVKDTLVPLLDKETGSGLNNLE--IFRKLPAY-WEKQFN 246
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFD-----VDSFPHY 362
+ M K VLPPT TRVSE++P I +F+QT++D AY +D SVYFD DS Y
Sbjct: 247 KDMGKLNVLPPTVTTRVSEYVPEIVTFVQTIIDNGFAYATADGSVYFDTSKFDADSKHSY 306
Query: 363 FKL--WGRNE----NITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWH 409
K W + + N + ++ K+S DFALWK++KPGEP ++S WGKGRPGWH
Sbjct: 307 AKCQPWNKGQLDLINDAEGSLSNFNASGKKSNNDFALWKNSKPGEPEWDSPWGKGRPGWH 366
Query: 410 IECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGT 467
IECS MAS G +D+H+GGIDL FPHH+NE AQS A + QWVNY+LHTGHL G
Sbjct: 367 IECSVMASDVLGANIDIHSGGIDLAFPHHDNELAQSEAKFDNEQWVNYFLHTGHLHIEGQ 426
Query: 468 DGTRRLRAARFIT 480
++ L+ FIT
Sbjct: 427 KMSKSLK--NFIT 437
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 80/143 (55%), Gaps = 9/143 (6%)
Query: 20 PKWSLPSGYDTG---IKIYNPITKTKVPFI-IQNKNHLKWYACGPTVYDSPHIGHAVCNV 75
PKW P +K+YN +T++K F+ I N + WY+CGPTVYDS H+GHA V
Sbjct: 24 PKWLAPKQVPAEKPVLKLYNTLTRSKDVFVPISGANVVTWYSCGPTVYDSSHMGHARNYV 83
Query: 76 KLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLPLIFKI-- 131
+DI RRI+ YF + +VTDIDDKII +A N L E Y++ + +I K+
Sbjct: 84 SIDINRRIMSDYFGYDINFVQNVTDIDDKIILRARHNHLFEKYESSVEEVTPAVIEKVKA 143
Query: 132 -LHQKVVGSIPTRGHAVCNVKLD 153
L Q V ++P+ G +L+
Sbjct: 144 ALAQYVEKNLPSSGDVSTIAQLE 166
>gi|406606393|emb|CCH42167.1| cysteinyl-tRNA synthetase [Wickerhamomyces ciferrii]
Length = 762
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 195/368 (52%), Gaps = 38/368 (10%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYK-------TV 194
GHA V +DI RRIL+ YF + + +VTDIDDKII +A N L +++K TV
Sbjct: 67 GHARNYVTIDINRRILQDYFGYNIKFVQNVTDIDDKIIIRARVNYLFDEFKKQYSGESTV 126
Query: 195 AKRYFLRLIFKILHQKVVRKLAIDLKKAKVD----SGPVLTKCDEFRDELLALGVQIKDQ 250
+ + K K + K + ++ D S V + ++ + ++
Sbjct: 127 NESVLSK--SKDAWSKFITKNLSEAPSSESDFITWSESVNVTEKQVQEPKFPMHLKSAKT 184
Query: 251 KCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESM 310
A +K + D F ++ L+ + LG +F+ F +E +Y E M
Sbjct: 185 ALSAIQNYK--TIPKDEFFENIKDVLVPVLDEELGHTINDPEIFKATPAF-WEKKYNEDM 241
Query: 311 EKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH-----YFKL 365
VLPPT TRVSE++P I F++ ++ AY D SVYFD F Y KL
Sbjct: 242 VALNVLPPTIVTRVSEYVPEIIEFVEKIISNGYAYATDDGSVYFDTVRFDKSENHDYAKL 301
Query: 366 --WGRNE---------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
W R + +++ + KRS DFALWKS+KPGEP +ES WGKGRPGWHIECS
Sbjct: 302 QPWNRGQADLIADGEGSLSTGSGKRSTNDFALWKSSKPGEPEWESPWGKGRPGWHIECSV 361
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRR 472
MA+ G ++D+H+GGIDL FPHH+NE AQS A ++ QWVNY+LHTGHL G ++
Sbjct: 362 MATAVLGKEMDIHSGGIDLAFPHHDNEIAQSEACYDHEQWVNYFLHTGHLHIEGQKMSKS 421
Query: 473 LRAARFIT 480
L+ FIT
Sbjct: 422 LK--NFIT 427
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 72/107 (67%), Gaps = 10/107 (9%)
Query: 20 PKWSLP---SGYDTG---IKIYNPITKTKVPFI-IQNKNHLKWYACGPTVYDSPHIGHAV 72
PKW+ P + + G +K+YN +T+TK F I+ KN +KWY+CGPTVYDS H+GHA
Sbjct: 12 PKWNSPVKKNATENGEPVLKLYNSLTRTKTEFQPIEGKN-VKWYSCGPTVYDSSHMGHAR 70
Query: 73 CNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYK 117
V +DI RRIL+ YF + + +VTDIDDKII +A N L +++K
Sbjct: 71 NYVTIDINRRILQDYFGYNIKFVQNVTDIDDKIIIRARVNYLFDEFK 117
>gi|340715109|ref|XP_003396062.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like [Bombus
terrestris]
Length = 727
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 194/364 (53%), Gaps = 43/364 (11%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RR+L YF + + ++TDIDDKII +A N L E Y + + + L
Sbjct: 57 GHARSYISFDILRRVLSDYFGYDILYVMNITDIDDKIIKRARQNYLYEKY--IEENHTLD 114
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDG 261
I K V + D K D+ KC E L V+ + E + KD
Sbjct: 115 EILD--DAKYVMCIFEDTVKNTNDTDK---KC---MLEALLCNVEKAIENLEKVVKLKDE 166
Query: 262 KVFSDRVFISL-----PLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVL 316
+ + + L PL L + G +F L +E+E+ + M+ +L
Sbjct: 167 EKMKEYQELLLKEARDPLAEWLDKTK--GATVTEHSIFTKLSQ-HWEMEFHKDMDSLNIL 223
Query: 317 PPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF----PHYF-----KLWG 367
P TRVSE+IP I +FI+ +++ AY S+ SVYFDV F HY+ + +G
Sbjct: 224 RPNVLTRVSEYIPEIITFIEKIIENGIAY-ESNGSVYFDVACFDKQDKHYYAKLVPEAYG 282
Query: 368 RNENITQH---------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
++ + + KRSP DFALWK +K GEPW+ES WGKGRPGWHIECS MAS
Sbjct: 283 DTSSLQEGEGDLSSSKVSEKRSPTDFALWKCSKEGEPWWESPWGKGRPGWHIECSVMASI 342
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR--GTDGTRRLRAA 476
G +D+HTGGIDLKFPHH+NE AQ+ A++N S WV Y+LH+GHL G ++ L+
Sbjct: 343 ICGESLDIHTGGIDLKFPHHDNEMAQAEAYYNNSNWVKYFLHSGHLTIAGCKMSKSLK-- 400
Query: 477 RFIT 480
FIT
Sbjct: 401 NFIT 404
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
Query: 20 PKWSLPSGYDTGI-KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P + + K+YN +T+ K F+ Q NH+ WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PSWMPPERKSSSVLKLYNSLTREKEIFVPQFGNHILWYSCGPTVYDASHMGHARSYISFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY 116
I+RR+L YF + + ++TDIDDKII +A N L E Y
Sbjct: 67 ILRRVLSDYFGYDILYVMNITDIDDKIIKRARQNYLYEKY 106
>gi|424513523|emb|CCO66145.1| cysteinyl-tRNA synthetase [Bathycoccus prasinos]
Length = 808
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 209/465 (44%), Gaps = 108/465 (23%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
I N TKTK PF + N + WY CGPTVYDS H+GHA + D++RR+++ YF
Sbjct: 64 ILNTFTKTKTPFQTLSPNRIGWYICGPTVYDSAHMGHARNYINFDVLRRVMQDYFGYSVR 123
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVKLD 153
+ +VTDIDDKII +A + ++ ++ + + AV N+ D
Sbjct: 124 FVMNVTDIDDKIILRAQKRRAEF--------------VMSRAKKALMKEENEAVKNLVAD 169
Query: 154 IIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQKVVR 213
I +K + LKE + V + +R
Sbjct: 170 I-----------------------EKAVETNAPLKELCEKV---------------EALR 191
Query: 214 KLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGKVFSDRVFISLP 273
A+D + +D G + +E D + + K W + G
Sbjct: 192 AKALDTDGSILDVGDGFSNDEEEEDGSSSFTASVDGGK---DWSIQTG------------ 236
Query: 274 LYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQS 333
YL L Q EF+ + R GV P TRVSE+ I
Sbjct: 237 -YLKLAQF----------YEKEFMEDMRL----------LGVKNPDCLTRVSEYTKQIVE 275
Query: 334 FIQTLLDTKQAYIGSDHSVYFDVDSFPH-----YFKLW------------GRNENITQHA 376
+I+ ++ AY S+ SVYFDV +F + Y KL G + +
Sbjct: 276 YIEGIIKNGFAY-ESNGSVYFDVTAFENSENHKYAKLKKSALDDVEAAMDGEGALLKAES 334
Query: 377 VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFP 436
KR+ FDF LWK +K GEP + S WG+GRPGWHIECSAM S G VD++ GGIDL FP
Sbjct: 335 EKRNDFDFVLWKKSKKGEPSWPSPWGEGRPGWHIECSAMCSDVLGKYVDVNGGGIDLSFP 394
Query: 437 HHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAAR-FIT 480
HHEN+ AQS A ++ QWVN++ H+GHL DG + ++ + FIT
Sbjct: 395 HHENQLAQSEAHYDIKQWVNFFAHSGHLH-IDGLKMSKSLKNFIT 438
>gi|241856247|ref|XP_002416056.1| cysteinyl-tRNA synthetase, putative [Ixodes scapularis]
gi|215510270|gb|EEC19723.1| cysteinyl-tRNA synthetase, putative [Ixodes scapularis]
Length = 547
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/182 (53%), Positives = 118/182 (64%), Gaps = 6/182 (3%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RYE E+ E + K GVLPPT RVSE++P + F + L D AY +D S+YFDV P
Sbjct: 132 RYEREFREDIAKLGVLPPTLYARVSEYVPSVVRFCEVLRDKGHAYAAADGSLYFDVSQRP 191
Query: 361 HY--FKLWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
Y F+ G +I VKR P DFALWK AKPGEP + S WG GRPGWHIECSAMAS
Sbjct: 192 DYGLFRAPGMGSSIPVVGVKRDPRDFALWKGAKPGEPQWTSPWGPGRPGWHIECSAMASE 251
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR----GTDGTRRLR 474
G VD+HTGG DL FPHHENEEAQS + H +S+WV +WLH G + GTD + +
Sbjct: 252 LLGDSVDIHTGGRDLAFPHHENEEAQSRSRHGKSRWVRHWLHMGQVMVAKGGTDAVKMSK 311
Query: 475 AA 476
+A
Sbjct: 312 SA 313
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 73/99 (73%)
Query: 25 PSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRIL 84
P G+DTGI++Y+PI + KVP +Q++ KWY+CGPTVYDS H+GHA ++ DIIRRIL
Sbjct: 35 PDGHDTGIRVYDPIGRAKVPLKLQHERVAKWYSCGPTVYDSSHVGHAYTYLRTDIIRRIL 94
Query: 85 EHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+F + +++ +TDIDDKII +A L E +T+A+RY
Sbjct: 95 GRFFDVDVVMVMGITDIDDKIIARAVQLGETPETLARRY 133
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 103 DKIINKANSLKEDYKTVAKRYFL-PLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRILEH 161
D I LK ++ VAK Y P ++ H GHA ++ DIIRRIL
Sbjct: 46 DPIGRAKVPLKLQHERVAKWYSCGPTVYDSSHV---------GHAYTYLRTDIIRRILGR 96
Query: 162 YFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
+F + +++ +TDIDDKII +A L E +T+A+RY
Sbjct: 97 FFDVDVVMVMGITDIDDKIIARAVQLGETPETLARRY 133
>gi|448508916|ref|XP_003866025.1| tRNA-Cys synthetase [Candida orthopsilosis Co 90-125]
gi|380350363|emb|CCG20585.1| tRNA-Cys synthetase [Candida orthopsilosis Co 90-125]
Length = 784
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 131/362 (36%), Positives = 190/362 (52%), Gaps = 29/362 (8%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA-------NSLKEDYKTVAK 196
GHA V DI RRIL+ YF + + I +VTDIDDKII A + YK V +
Sbjct: 89 GHARNYVSTDICRRILQDYFGYNVLFIQNVTDIDDKIIIAARQQHLFEEKIVSHYKDVKE 148
Query: 197 RYFL-RLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEAT 255
L + +K + + D++K V + +E + E L + +K A
Sbjct: 149 VLGLSKTSLSYYVEKNLPEFTGDIEKDFVIWSQSIPNLEEIKKEKPKLPMYVK-AVVRAL 207
Query: 256 WQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGV 315
D + + + ++ G +F+ L +E ++ E M K V
Sbjct: 208 NAINDKNISYNDFLNEIKDVAVVYLDKEHGASVTEPSIFKKL-PLYWENKFNEDMSKLSV 266
Query: 316 LPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH----YFKL--WGRN 369
LPP+ TRVSE++P I ++ ++ AY D SVYFD + H Y KL W +
Sbjct: 267 LPPSVTTRVSEYVPDIIDYVDKIISNGYAYATEDGSVYFDTVKYEHSKHDYAKLQPWNKG 326
Query: 370 E---------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+ +++ KR+P DFALWK++KPGEP ++S WGKGRPGWHIECS MAS
Sbjct: 327 DMSLINDGEGSLSLGNSKRNPSDFALWKASKPGEPAWDSKWGKGRPGWHIECSVMASDIT 386
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRRLRAARF 478
G Q+D+H+GG+DL FPHH+NE AQS A+ + +QWVNY++H GHL +G ++ L+ F
Sbjct: 387 GSQMDIHSGGVDLCFPHHDNELAQSEAYFDNNQWVNYFMHNGHLHIQGQKMSKSLK--NF 444
Query: 479 IT 480
IT
Sbjct: 445 IT 446
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 16 SCESPKWSLPSGYDTG---IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAV 72
S + PKW PS + +KIYN +T+TK F H+ WY+CGPTVYD H+GHA
Sbjct: 33 SIQQPKWYEPSDKSSAKPKLKIYNSLTRTKNDFHSIKPGHITWYSCGPTVYDHSHMGHAR 92
Query: 73 CNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII 106
V DI RRIL+ YF + + I +VTDIDDKII
Sbjct: 93 NYVSTDICRRILQDYFGYNVLFIQNVTDIDDKII 126
>gi|50304753|ref|XP_452332.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641465|emb|CAH01183.1| KLLA0C03025p [Kluyveromyces lactis]
Length = 766
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 143/393 (36%), Positives = 189/393 (48%), Gaps = 91/393 (23%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--------------NSLKE 189
GHA V +DI RRIL+ YF + +VTDIDDKII +A N + E
Sbjct: 79 GHARNYVSIDINRRILQDYFGYDINFVQNVTDIDDKIIIRARQNFLFEEYVKRNDNKVTE 138
Query: 190 DYKTVAKRYFLRLIFKILHQK--VVRKL-----AIDLKKAKVDS--------------GP 228
D K + K L+QK V + +DL+K KV++
Sbjct: 139 DTVEEVKISLFEFVEKNLNQKFSTVEEYESWFSGLDLEKEKVENPKFSMYSTSVSNAIES 198
Query: 229 VLTKCDEFRDELLALGVQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLT 288
+ +K D F + + V + D+K +T D +F LP Y
Sbjct: 199 LKSKGDNFFELAKDVLVPLLDKKFGSTLNDPD-------IFRKLPAY------------- 238
Query: 289 LRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGS 348
+E Y + M VLPPT TRVSE++P I F++T++ AY S
Sbjct: 239 -------------WEQRYDQDMAALNVLPPTVTTRVSEYVPEIVQFVETIISNGYAYATS 285
Query: 349 DHSVYFDVDSFP-----HYFKL--WGRNE------------NITQHAVKRSPFDFALWKS 389
D SVYFD F Y K W + + + + KRS DFALWK+
Sbjct: 286 DGSVYFDTAKFDSSEGHEYAKCQPWNKGQLDLIQDGEGSLSDFSAKNGKRSANDFALWKA 345
Query: 390 AKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFH 449
+KPGEP + S WGKGRPGWHIECS MAS G +D+HTGGIDL FPHH+NE AQS A +
Sbjct: 346 SKPGEPEWPSPWGKGRPGWHIECSVMASDIHGSVIDIHTGGIDLAFPHHDNELAQSEACY 405
Query: 450 NQSQWVNYWLHTGHL--RGTDGTRRLRAARFIT 480
+ QW+NY+LHTGHL G ++ L+ FIT
Sbjct: 406 DNHQWINYFLHTGHLHIEGQKMSKSLK--NFIT 436
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 20 PKWSLPSGYDT--GIKIYNPITKTKVPFII-QNKNHLKWYACGPTVYDSPHIGHAVCNVK 76
PKW P +K+YN +T+ K F+ N + WY+CGPTVYD+ H+GHA V
Sbjct: 27 PKWFKPEQQKPLPVLKLYNTLTRNKEEFVTHSNSKCVTWYSCGPTVYDASHMGHARNYVS 86
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY 116
+DI RRIL+ YF + +VTDIDDKII +A N L E+Y
Sbjct: 87 IDINRRILQDYFGYDINFVQNVTDIDDKIIIRARQNFLFEEY 128
>gi|339897124|ref|XP_003392266.1| putative cysteinyl-tRNA synthetase [Leishmania infantum JPCM5]
gi|398011885|ref|XP_003859137.1| unnamed protein product [Leishmania donovani]
gi|321399071|emb|CBZ08414.1| putative cysteinyl-tRNA synthetase [Leishmania infantum JPCM5]
gi|322497350|emb|CBZ32425.1| unnamed protein product [Leishmania donovani]
Length = 784
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 198/401 (49%), Gaps = 60/401 (14%)
Query: 104 KIINKANSLKEDYKTVAKRYFL-----PLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRI 158
K++N ED+ R P ++ + H GHA + DIIRR+
Sbjct: 39 KVMNSLTETLEDFAPRDGRVVRWYTCGPTVYDLSHM---------GHARAYLTFDIIRRV 89
Query: 159 LEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLRLIFKILHQKVVRKLA 216
+E YF I ++TDIDDKII +A N L +D+K R H V R +A
Sbjct: 90 MEDYFGYSVIYQMNITDIDDKIIKRARVNKLLDDFKEGELR----------HGDVARLMA 139
Query: 217 IDLKK-AKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATW--QFKDGKVFSDRVFISLP 273
+ +SG K F + K + E Q K+ ++ +V I+
Sbjct: 140 FTAEAVTAAESGLAKRKAALFEPITEGASSRAKADREEKLLEVQLKESQLVETKVKIAAA 199
Query: 274 LYLIL--------IQVSLLGPLTLRTVVFEFLFN---FRYELEYFESMEKFGVLPPTRAT 322
+ LL + +V + +F +YE +FE M++ G+ P T
Sbjct: 200 KDDFAALFAAASGVNGDLLDERSGHSVSDQQIFEDHARKYERAFFEDMQRLGIREPDIVT 259
Query: 323 RVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH----YFKLW-GRNENITQHAV 377
RV+E++P + F+Q ++D AY+G + SV+FD +++ Y KL G + N T+ +
Sbjct: 260 RVTEYVPQVVEFVQKIIDNGFAYVG-ETSVFFDTEAYIRAGHDYPKLKPGGDRNTTEDEM 318
Query: 378 --------------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQ 423
KRSP DFALWK +KPGEP + S WG+GRPGWHIECS MAS G
Sbjct: 319 AEGEGVLSKGIEGEKRSPNDFALWKFSKPGEPRWPSPWGEGRPGWHIECSVMASDILGEN 378
Query: 424 VDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
+D+H+GG DLKFPHH+NE AQS A + SQWVNY+LH GHL
Sbjct: 379 MDIHSGGWDLKFPHHDNECAQSEACNLHSQWVNYFLHCGHL 419
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P D G+K+ N +T+T F ++ ++WY CGPTVYD H+GHA + D
Sbjct: 25 PAWYPPLKLDGNGLKVMNSLTETLEDFAPRDGRVVRWYTCGPTVYDLSHMGHARAYLTFD 84
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRY 123
IIRR++E YF I ++TDIDDKII +A N L +D+K R+
Sbjct: 85 IIRRVMEDYFGYSVIYQMNITDIDDKIIKRARVNKLLDDFKEGELRH 131
>gi|260948980|ref|XP_002618787.1| hypothetical protein CLUG_02246 [Clavispora lusitaniae ATCC 42720]
gi|238848659|gb|EEQ38123.1| hypothetical protein CLUG_02246 [Clavispora lusitaniae ATCC 42720]
Length = 762
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 145/407 (35%), Positives = 204/407 (50%), Gaps = 61/407 (14%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPT------RGHAVCNVKLDIIRRILEHYFHIHSIVIS 171
T AK F+P F + G PT GHA V DI RRIL+ YF + +
Sbjct: 38 TRAKEDFVPQKFNYITWYCCG--PTVYNYAHMGHARNYVCSDICRRILQDYFGYNINFVQ 95
Query: 172 SVTDIDDKIINKANSLKEDYKTVAKRY------FLRLIFKILHQKVVRKL---AIDLKKA 222
+VTDIDDKII A + +A Y + + L + V +KL + DL+K
Sbjct: 96 NVTDIDDKIIISARQQYLFEQKIANVYTEKTPELVEQVKGYLGEYVSKKLPDFSGDLEK- 154
Query: 223 KVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVS 282
D P + D L AL V A K + +F + P L V
Sbjct: 155 --DLLPWIASLD-----LTALAVSAPKLPMHAN----ASKRAHEAIFGAAPFADFLSAVE 203
Query: 283 LL---------GPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQS 333
+ G + +F+ L + +E + E M K VLPPT TRVSE++P I
Sbjct: 204 EVCVPSLDAKYGSSVVEPSIFKKLPAY-WENSFNEDMAKLNVLPPTVTTRVSEYVPEIID 262
Query: 334 FIQTLLDTKQAYIGSDHSVYFDVDSFPH-----YFKL--WGRNE-----------NITQH 375
F+ ++ AY+ +D SVYFD F + Y KL W + ++++
Sbjct: 263 FVDKIISNGFAYVTADGSVYFDTAKFENDPNHDYAKLQPWNKGSMSLINDGEGSLSVSES 322
Query: 376 AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKF 435
+K++P DF+LWK++KPGEP ++S WG GRPGWHIECS MAS G +D+H+GGIDL F
Sbjct: 323 IIKKNPADFSLWKASKPGEPAWDSKWGPGRPGWHIECSVMASDILGSTIDIHSGGIDLCF 382
Query: 436 PHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRRLRAARFIT 480
PHH+NE AQS A+ + QW+NY++H GHL +G ++ L+ FIT
Sbjct: 383 PHHDNELAQSEAYFDNKQWINYFMHNGHLHIQGQKMSKSLK--NFIT 427
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 11 LSYATSCESPKWSLPSGYDTGI-KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIG 69
+S + P W P + KIYN +T+ K F+ Q N++ WY CGPTVY+ H+G
Sbjct: 9 MSTKKPVQQPPWQKPVPPSAPVLKIYNSLTRAKEDFVPQKFNYITWYCCGPTVYNYAHMG 68
Query: 70 HAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII 106
HA V DI RRIL+ YF + + +VTDIDDKII
Sbjct: 69 HARNYVCSDICRRILQDYFGYNINFVQNVTDIDDKII 105
>gi|383855614|ref|XP_003703305.1| PREDICTED: cysteine--tRNA ligase, cytoplasmic-like isoform 2
[Megachile rotundata]
Length = 727
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 140/357 (39%), Positives = 195/357 (54%), Gaps = 35/357 (9%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RR+L YF + + + ++TDIDDKII +A N L E Y + + + L
Sbjct: 57 GHARSYISFDILRRVLSDYFGYNVLYVMNITDIDDKIIKRARQNYLYEKY--IEENHALD 114
Query: 202 LIFKILHQKVVRKLAIDLKKAK-VDSGPVLTKC---DEFRDELLALGVQIKDQKCEATWQ 257
I + V+ +K VD +L K E E L V++KD+ +Q
Sbjct: 115 EILDDA-KNVMCTFEDTVKTTNDVDKKCMLQKMLHDVEKAIENLENAVKLKDENKIKEYQ 173
Query: 258 FKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLP 317
K D PL L + G +F L +E E+ + M+ VL
Sbjct: 174 ELLLKEARD------PLAEWLDKNK--GATVTEHSIFTKLSQ-NWEAEFHKDMDSLNVLK 224
Query: 318 PTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF----PHYF-----KLWGR 368
P TRVSE+IP I +F++ +++ AY S+ SVYFDV +F HY+ + +G
Sbjct: 225 PNVLTRVSEYIPEIIAFVKKIIENGVAY-ESNGSVYFDVAAFDKQDKHYYAKLVPEAYGD 283
Query: 369 NENIT---QHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVD 425
++ + + KRSP DFALWKS+K GEPW++S WGKGRPGWHIECS MAS G +D
Sbjct: 284 TSSVLSTHESSEKRSPTDFALWKSSKEGEPWWDSPWGKGRPGWHIECSVMASIICGESLD 343
Query: 426 LHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRRLRAARFIT 480
+HTGG+DLKFPHH+NE AQ+ A+ N S WV Y+LH GHL G ++ L+ FIT
Sbjct: 344 IHTGGVDLKFPHHDNEIAQAEAYFNNSNWVRYFLHAGHLTISGCKMSKSLK--NFIT 398
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 65/100 (65%), Gaps = 3/100 (3%)
Query: 20 PKWSLPSGYDTGI-KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W+ P +T + K+YN +T+ K FI Q N + WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PPWAPPQRKNTSVLKLYNSLTRDKEVFIPQFGNRILWYSCGPTVYDASHMGHARSYISFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY 116
I+RR+L YF + + + ++TDIDDKII +A N L E Y
Sbjct: 67 ILRRVLSDYFGYNVLYVMNITDIDDKIIKRARQNYLYEKY 106
>gi|50550761|ref|XP_502853.1| YALI0D15268p [Yarrowia lipolytica]
gi|49648721|emb|CAG81041.1| YALI0D15268p [Yarrowia lipolytica CLIB122]
Length = 743
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 135/364 (37%), Positives = 191/364 (52%), Gaps = 38/364 (10%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V DI RRIL+ YF + + +VTDIDDKII + K V +
Sbjct: 60 GHARNYVSTDINRRILQDYFGYDVLFVQNVTDIDDKIIIRGRQQHLFQKYVEEN------ 113
Query: 204 FKILHQKVVRKLAI---DLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQ--- 257
K L Q+V+ K+ D K K+ + +++ + I+D K +
Sbjct: 114 -KGLSQEVLSKVLSSWNDFAKDKLGYTDEVADFEKYVESETTKLKSIEDAKFKMNLASAQ 172
Query: 258 -----FKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEK 312
D V D + ++ L+L G +F L F +E E+ + M K
Sbjct: 173 AAAKALTDKTVTPDIFYPAVKDVLVLTLDQEQGSTVSDHKIFRELSAF-WEGEFDKDMAK 231
Query: 313 FGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH---YFKL--WG 367
VL P+ TRVSE++P I +++ ++D AY+ SD VYFD +F Y KL W
Sbjct: 232 LNVLAPSVTTRVSEYVPEIVEYVEKIIDNGYAYV-SDSGVYFDTAAFDKSHDYAKLQPWN 290
Query: 368 RNE---------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
+ +++ KR+ DFALWK++KPGEP+++S WG+GRPGWHIECS MAS
Sbjct: 291 KGHADLIDEGEGSLSNKTGKRNSSDFALWKASKPGEPFWDSPWGQGRPGWHIECSVMASA 350
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRRLRAA 476
G Q+D+H+GGIDL FPHH+NE AQS A ++ QWVNY+LHTGHL G ++ L+
Sbjct: 351 ILGPQMDIHSGGIDLAFPHHDNELAQSEAHYDCKQWVNYFLHTGHLHIEGQKMSKSLK-- 408
Query: 477 RFIT 480
FIT
Sbjct: 409 NFIT 412
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 14 ATSCESPKW---SLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGH 70
+++ + P+W P DT +K+YN +T++K F+ N + WY CGPTVYDS H+GH
Sbjct: 3 SSAVKQPEWHAPKEPQSRDT-LKLYNSLTRSKTAFVPIAGNKVTWYCCGPTVYDSSHMGH 61
Query: 71 AVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII 106
A V DI RRIL+ YF + + +VTDIDDKII
Sbjct: 62 ARNYVSTDINRRILQDYFGYDVLFVQNVTDIDDKII 97
>gi|68467189|ref|XP_722256.1| hypothetical protein CaO19.12397 [Candida albicans SC5314]
gi|68467418|ref|XP_722142.1| hypothetical protein CaO19.4931 [Candida albicans SC5314]
gi|46444091|gb|EAL03368.1| hypothetical protein CaO19.4931 [Candida albicans SC5314]
gi|46444215|gb|EAL03491.1| hypothetical protein CaO19.12397 [Candida albicans SC5314]
Length = 781
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 193/377 (51%), Gaps = 57/377 (15%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--------------NSLKE 189
GHA V DI RRIL+ YF + + +VTDIDDKII A + +
Sbjct: 83 GHARNYVSTDICRRILQDYFGYNIKFVQNVTDIDDKIIIAARQQYLFEEKLVKNYKEIND 142
Query: 190 DYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKD 249
+ KT AK Y + K L + DL K + + E + + +K
Sbjct: 143 ELKTKAKEYLQFYVSKNLPE-----FEGDLAKDFITWSNDIKNLSEIVKDKPKFPMYVKA 197
Query: 250 QKC--EATWQFKDGKVFSDRVFISLPLYLILIQ-VSL------LGPLTLRTVVFEFLFNF 300
K E+ ++ KD ISL +L I+ V++ G VF L ++
Sbjct: 198 AKLAHESIYETKD---------ISLEKFLDSIKDVAMPHLDKEFGATVTDPQVFRKLPSY 248
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+E Y E M + VLPP+ TRVSE++P I F+ ++ AY D SVYFD +
Sbjct: 249 -WEKRYNEDMARLNVLPPSVTTRVSEYMPDIIEFVDKIVTNGYAYKTDDGSVYFDTVKYE 307
Query: 361 H----YFKL--WGRNE---------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGR 405
H Y KL W + + +++ KR+ DFALWK++KPGEP ++S WGKGR
Sbjct: 308 HSQHDYAKLQPWSKGDMSLINDGEGSLSVSNTKRNASDFALWKASKPGEPAWDSKWGKGR 367
Query: 406 PGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL- 464
PGWHIECS MAS G +D+H+GGIDL FPHH+NE AQS A+ + QWVNY++H GHL
Sbjct: 368 PGWHIECSVMASDITGENMDIHSGGIDLCFPHHDNELAQSEAYFDNKQWVNYFMHNGHLH 427
Query: 465 -RGTDGTRRLRAARFIT 480
+G ++ L+ FIT
Sbjct: 428 IQGQKMSKSLK--NFIT 442
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 5 SQSSLALSYATSCESPKWSLPSGYDTG---IKIYNPITKTKVPFIIQNKNHLKWYACGPT 61
S ++ + + + + P+W P + +KIYN +T++K F H+ WY+CGPT
Sbjct: 16 STTTTSAAKKPTVKQPQWYQPENKNNSKPTLKIYNSLTRSKNEFYPNKPGHITWYSCGPT 75
Query: 62 VYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII 106
VYD H+GHA V DI RRIL+ YF + + +VTDIDDKII
Sbjct: 76 VYDHSHMGHARNYVSTDICRRILQDYFGYNIKFVQNVTDIDDKII 120
>gi|307210717|gb|EFN87140.1| Cysteinyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
Length = 729
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/346 (38%), Positives = 186/346 (53%), Gaps = 43/346 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RR+L YF + + ++TDIDDKII +A N L E Y V + + L
Sbjct: 57 GHARSYISFDILRRVLSDYFGYDVLYVMNITDIDDKIIKRARQNYLYEKY--VEENHNLN 114
Query: 202 LIFKILHQ------KVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEAT 255
I Q V + KK +++ +L+K + E L V+ KD+ A
Sbjct: 115 TILDDAKQVMSNFENTVHTITDLDKKCMLEN--MLSKLTKVI-ENLEKAVREKDEHEIAV 171
Query: 256 WQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNF---RYELEYFESMEK 312
Q K D + L L T+ +FN +E E+ + M+
Sbjct: 172 LQELLLKEVKD------------LLSDWLDQLKGSTITEHSIFNKLSKHWESEFHKDMDA 219
Query: 313 FGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF------------P 360
VL P+ TRVSE++P I +F+Q ++D AY GS+ SVYFDV F P
Sbjct: 220 LNVLKPSVLTRVSEYVPEIIAFVQQIIDNGLAY-GSNGSVYFDVSKFDKQEKHFYAKLVP 278
Query: 361 HYFKLWGRNENITQHAV--KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
+ + ++T+ + KRS DFALWKS+K GEPW++S WGKGRPGWHIECS MAS
Sbjct: 279 EAYGDTSSDLSVTEDKLSEKRSLTDFALWKSSKAGEPWWDSPWGKGRPGWHIECSVMASV 338
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+HTGG+DLKFPHH+NE AQ+ A+ + S WV Y+LH+GHL
Sbjct: 339 ICGENLDIHTGGVDLKFPHHDNELAQAEAYFDNSHWVKYFLHSGHL 384
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 120/245 (48%), Gaps = 17/245 (6%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W LP D T +++YN +T+ K F+ Q N + WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PAWHLPDRKDNTVLQLYNSLTRKKEVFVPQFGNRILWYSCGPTVYDASHMGHARSYISFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLPLIFKILHQKV 136
I+RR+L YF + + ++TDIDDKII +A N L E Y V + + L I Q V
Sbjct: 67 ILRRVLSDYFGYDVLYVMNITDIDDKIIKRARQNYLYEKY--VEENHNLNTILDDAKQ-V 123
Query: 137 VGSIPTRGHAVCNV-KLDIIRRILEHYFHIHSIVISSVTDIDD-KIINKANSLKEDYKTV 194
+ + H + ++ K ++ +L + + +V + D+ +I L ++ K +
Sbjct: 124 MSNFENTVHTITDLDKKCMLENMLSKLTKVIENLEKAVREKDEHEIAVLQELLLKEVKDL 183
Query: 195 AKRYFLRL---------IFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGV 245
+ +L IF L + + D+ V VLT+ E+ E++A
Sbjct: 184 LSDWLDQLKGSTITEHSIFNKLSKHWESEFHKDMDALNVLKPSVLTRVSEYVPEIIAFVQ 243
Query: 246 QIKDQ 250
QI D
Sbjct: 244 QIIDN 248
>gi|328351033|emb|CCA37433.1| cysteinyl-tRNA synthetase [Komagataella pastoris CBS 7435]
Length = 741
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 199/370 (53%), Gaps = 50/370 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDY--KTVAKRYFLR 201
GHA V +DI RRIL+ +F + + +VTDIDDKII KA +++Y K +K+Y
Sbjct: 55 GHARNYVTIDINRRILQDFFGYNIKFVQNVTDIDDKIILKA---RQEYLFKEFSKKYS-- 109
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEA------- 254
+I ++ +++ A+ + V K D E A + I ++ +
Sbjct: 110 ---EITNE--LKQFALGSWNSYVAKNLTDFKGDSSNFESWAQSLNIAEKAVDNPKIPMHI 164
Query: 255 TWQFKDGKVFSDRVFISLPLYLILIQ---VSLLGPLTLRTVVFEFLF---NFRYELEYFE 308
T K K SD L YL I+ V L L TV +F + +E Y E
Sbjct: 165 TAAKKALKTSSD-----LNEYLENIKDVVVPELDKLYGSTVTDPEIFKQTSSYWEQRYDE 219
Query: 309 SMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYF 363
ME+ +LP T TRVSE++P I F+Q ++D AY+ D SVYFD F Y
Sbjct: 220 DMERLNILPATVTTRVSEYVPEIVEFVQGIIDRGYAYVTKDGSVYFDTTQFDTNEKHDYA 279
Query: 364 KL--WGRNE---------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
KL W + + +++ + KR+ DFALWKS+KPGEP ++S WG+GRPGWHIEC
Sbjct: 280 KLQPWNKADLELLKEGEGSLSSNDGKRNSADFALWKSSKPGEPSWKSPWGQGRPGWHIEC 339
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGT 470
S MAS G +D+H+GGIDL FPHH+NE AQS A + QWVNY+LHTGHL G +
Sbjct: 340 SVMASDITGESMDIHSGGIDLAFPHHDNELAQSEARFDCKQWVNYFLHTGHLHIEGQKMS 399
Query: 471 RRLRAARFIT 480
+ L+ FIT
Sbjct: 400 KSLK--NFIT 407
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 78/124 (62%), Gaps = 9/124 (7%)
Query: 20 PKWSLPSGYDTG--IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
P W+ P+ +K++N +T+TKVPFI N N + WY+CGPTVYDS H+GHA V +
Sbjct: 4 PAWNQPTQKVERPVLKLFNSLTRTKVPFIPTNANEVTWYSCGPTVYDSSHMGHARNYVTI 63
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDY--KTVAKRYFLPLIFKILHQK 135
DI RRIL+ +F + + +VTDIDDKII KA +++Y K +K+Y I L Q
Sbjct: 64 DINRRILQDFFGYNIKFVQNVTDIDDKIILKA---RQEYLFKEFSKKY--SEITNELKQF 118
Query: 136 VVGS 139
+GS
Sbjct: 119 ALGS 122
>gi|238878314|gb|EEQ41952.1| cysteinyl-tRNA synthetase [Candida albicans WO-1]
Length = 781
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 192/377 (50%), Gaps = 57/377 (15%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--------------NSLKE 189
GHA V DI RRIL+ YF + + +VTDIDDKII A +
Sbjct: 83 GHARNYVSTDICRRILQDYFGYNIKFVQNVTDIDDKIIIAARQQYLFEEKLVKNYKEFND 142
Query: 190 DYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKD 249
+ KT AK Y + K L + DL K + + E + + +K
Sbjct: 143 ELKTKAKEYLQFYVSKNLPE-----FEGDLAKDFITWSNDIKNLSEIVKDKPKFPMYVKA 197
Query: 250 QKC--EATWQFKDGKVFSDRVFISLPLYLILIQ-VSL------LGPLTLRTVVFEFLFNF 300
K E+ ++ KD ISL +L I+ V++ G VF L ++
Sbjct: 198 AKLAHESIYETKD---------ISLEKFLDSIKDVAMPHLDKEFGATVTDPQVFRKLPSY 248
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+E Y E M + VLPP+ TRVSE++P I F+ ++ AY D SVYFD +
Sbjct: 249 -WEKRYNEDMARLNVLPPSVTTRVSEYMPDIIEFVDKIVTNGYAYKTDDGSVYFDTVKYE 307
Query: 361 H----YFKL--WGRNE---------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGR 405
H Y KL W + + +++ KR+ DFALWK++KPGEP ++S WGKGR
Sbjct: 308 HSQHDYAKLQPWSKGDMSLINDGEGSLSVSNTKRNASDFALWKASKPGEPAWDSKWGKGR 367
Query: 406 PGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL- 464
PGWHIECS MAS G +D+H+GGIDL FPHH+NE AQS A+ + QWVNY++H GHL
Sbjct: 368 PGWHIECSVMASDITGENMDIHSGGIDLCFPHHDNELAQSEAYFDNKQWVNYFMHNGHLH 427
Query: 465 -RGTDGTRRLRAARFIT 480
+G ++ L+ FIT
Sbjct: 428 IQGQKMSKSLK--NFIT 442
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 5 SQSSLALSYATSCESPKWSLPSGYDTG---IKIYNPITKTKVPFIIQNKNHLKWYACGPT 61
S ++ + + + + P+W P + +KIYN +T++K F H+ WY+CGPT
Sbjct: 16 STTTTSAAKKPTVKQPQWYQPENKNNSKPTLKIYNSLTRSKNEFYPNKPGHITWYSCGPT 75
Query: 62 VYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII 106
VYD H+GHA V DI RRIL+ YF + + +VTDIDDKII
Sbjct: 76 VYDHSHMGHARNYVSTDICRRILQDYFGYNIKFVQNVTDIDDKII 120
>gi|254567071|ref|XP_002490646.1| Essential protein of unknown function [Komagataella pastoris GS115]
gi|238030442|emb|CAY68366.1| Essential protein of unknown function [Komagataella pastoris GS115]
Length = 761
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 199/370 (53%), Gaps = 50/370 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDY--KTVAKRYFLR 201
GHA V +DI RRIL+ +F + + +VTDIDDKII KA +++Y K +K+Y
Sbjct: 75 GHARNYVTIDINRRILQDFFGYNIKFVQNVTDIDDKIILKA---RQEYLFKEFSKKYS-- 129
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEA------- 254
+I ++ +++ A+ + V K D E A + I ++ +
Sbjct: 130 ---EITNE--LKQFALGSWNSYVAKNLTDFKGDSSNFESWAQSLNIAEKAVDNPKIPMHI 184
Query: 255 TWQFKDGKVFSDRVFISLPLYLILIQ---VSLLGPLTLRTVVFEFLF---NFRYELEYFE 308
T K K SD L YL I+ V L L TV +F + +E Y E
Sbjct: 185 TAAKKALKTSSD-----LNEYLENIKDVVVPELDKLYGSTVTDPEIFKQTSSYWEQRYDE 239
Query: 309 SMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYF 363
ME+ +LP T TRVSE++P I F+Q ++D AY+ D SVYFD F Y
Sbjct: 240 DMERLNILPATVTTRVSEYVPEIVEFVQGIIDRGYAYVTKDGSVYFDTTQFDTNEKHDYA 299
Query: 364 KL--WGRNE---------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
KL W + + +++ + KR+ DFALWKS+KPGEP ++S WG+GRPGWHIEC
Sbjct: 300 KLQPWNKADLELLKEGEGSLSSNDGKRNSADFALWKSSKPGEPSWKSPWGQGRPGWHIEC 359
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGT 470
S MAS G +D+H+GGIDL FPHH+NE AQS A + QWVNY+LHTGHL G +
Sbjct: 360 SVMASDITGESMDIHSGGIDLAFPHHDNELAQSEARFDCKQWVNYFLHTGHLHIEGQKMS 419
Query: 471 RRLRAARFIT 480
+ L+ FIT
Sbjct: 420 KSLK--NFIT 427
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 81/132 (61%), Gaps = 9/132 (6%)
Query: 12 SYATSCESPKWSLPSGYDTG--IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIG 69
++ T P W+ P+ +K++N +T+TKVPFI N N + WY+CGPTVYDS H+G
Sbjct: 16 NFHTQMSQPAWNQPTQKVERPVLKLFNSLTRTKVPFIPTNANEVTWYSCGPTVYDSSHMG 75
Query: 70 HAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDY--KTVAKRYFLPL 127
HA V +DI RRIL+ +F + + +VTDIDDKII KA +++Y K +K+Y
Sbjct: 76 HARNYVTIDINRRILQDFFGYNIKFVQNVTDIDDKIILKA---RQEYLFKEFSKKY--SE 130
Query: 128 IFKILHQKVVGS 139
I L Q +GS
Sbjct: 131 ITNELKQFALGS 142
>gi|241950257|ref|XP_002417851.1| cysteine-tRNA ligase, putative; cysteinyl-tRNA synthetase, putative
[Candida dubliniensis CD36]
gi|223641189|emb|CAX45566.1| cysteine-tRNA ligase, putative [Candida dubliniensis CD36]
Length = 780
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 193/377 (51%), Gaps = 57/377 (15%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--------------NSLKE 189
GHA V DI RRIL+ YF + + +VTDIDDKII A + +
Sbjct: 82 GHARNYVSTDICRRILQDYFGYNIKFVQNVTDIDDKIIIAARQQYLFEEKLVKNYKEIND 141
Query: 190 DYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKD 249
+ KT A Y + K L + +L K + G + E E + +K
Sbjct: 142 ELKTKATEYLQFYVSKNLPE-----FKGNLAKDFITWGNEIKNLSEIIKEKPKFPMYLKA 196
Query: 250 QKC--EATWQFKDGKVFSDRVFISLPLYLILIQ-VSL------LGPLTLRTVVFEFLFNF 300
K E+ ++ KD ISL +L I+ V++ G +F L ++
Sbjct: 197 AKVAHESIYETKD---------ISLEKFLDSIKDVAMPHLDKEFGATVTDPQIFRKLPSY 247
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+E Y E M + VLPP+ TRVSE++P I F+ ++ AY D SVYFD +
Sbjct: 248 -WEKRYNEDMARLNVLPPSITTRVSEYMPDIIEFVDKIVSNGYAYKTDDGSVYFDTVKYE 306
Query: 361 H----YFKL--WGRNE---------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGR 405
H Y KL W + + +++ KR+ DFALWK++KPGEP ++S WGKGR
Sbjct: 307 HSQHDYAKLQPWSKGDMSLINDGEGSLSVSNTKRNASDFALWKASKPGEPAWDSKWGKGR 366
Query: 406 PGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL- 464
PGWHIECS MAS G +D+H+GGIDL FPHH+NE AQS A+ + QWVNY++H GHL
Sbjct: 367 PGWHIECSVMASDITGENMDIHSGGIDLCFPHHDNELAQSEAYFDNKQWVNYFMHNGHLH 426
Query: 465 -RGTDGTRRLRAARFIT 480
+G ++ L+ FIT
Sbjct: 427 IQGQKMSKSLK--NFIT 441
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 4 LSQSSLALSYATSCESPKWSLPSGYDTG---IKIYNPITKTKVPFIIQNKNHLKWYACGP 60
+S ++ + + + + P+W P + ++IYN +T++K F H+ WY+CGP
Sbjct: 14 MSSTTTSAAKKPTVKQPQWYQPENKNNAKPTLRIYNSLTRSKNEFYPNKPGHITWYSCGP 73
Query: 61 TVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII 106
TVYD H+GHA V DI RRIL+ YF + + +VTDIDDKII
Sbjct: 74 TVYDHSHMGHARNYVSTDICRRILQDYFGYNIKFVQNVTDIDDKII 119
>gi|320580808|gb|EFW95030.1| Cysteinyl-tRNA synthetase [Ogataea parapolymorpha DL-1]
Length = 737
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 144/367 (39%), Positives = 195/367 (53%), Gaps = 42/367 (11%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V +DI RRIL+ YF + + +VTDIDDKII KA + + A+++ +
Sbjct: 52 GHARNYVTIDINRRILQDYFGYNVKFVQNVTDIDDKIIIKARQ-EHLFGEFARKH--SAV 108
Query: 204 FKILHQKVVRKLAIDLKKAKVD-SGPVLTKCDEFRD--ELLALGVQIKDQKCEATWQFKD 260
L + R LA L K + G V DE+ +L ALG+Q K + K
Sbjct: 109 DSQLRETAQRALAAYLAKNLPEYEGTV--PFDEWARSLDLAALGLQ----KPKLPMHVKA 162
Query: 261 GKVFSDRVFISLPLYLILIQVS---------LLGPLTLRTVVFEFLFNFRYELEYFESME 311
S+ + L L L Q LG +F+ +F +E +Y E M
Sbjct: 163 CVAASEAIARETDLTLFLEQTKDVIVPELDKELGHTVTDPEIFKACSSF-WEHKYDEDMA 221
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL- 365
VLPPT TRVSE++P I +F+Q ++D AY SD SVYF+V F Y KL
Sbjct: 222 ALNVLPPTIVTRVSEYVPEIVAFVQQIIDKGYAYATSDGSVYFNVAKFDKDPAHEYAKLQ 281
Query: 366 -WGRNE---------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAM 415
W + +++ K + DFALWK++K GEP + S WG GRPGWHIECS M
Sbjct: 282 PWSKGNLELLEDGEGSLSAAQGKLNASDFALWKASKAGEPSWPSPWGPGRPGWHIECSVM 341
Query: 416 ASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRRL 473
A+ F G ++D+H+GGIDL FPHH+NE AQS A ++ QWVNY+LHTGHL G ++ L
Sbjct: 342 AADFVGDKLDIHSGGIDLAFPHHDNELAQSEAHYDCKQWVNYFLHTGHLHIEGQKMSKSL 401
Query: 474 RAARFIT 480
+ FIT
Sbjct: 402 K--NFIT 406
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 22 WSLPSGY-DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDII 80
W P D + +YN +T++KVPF+ + + + WY+CGPTVY+S H+GHA V +DI
Sbjct: 4 WVQPEKLPDAPLVLYNTLTRSKVPFVPSSSDEVTWYSCGPTVYNSSHMGHARNYVTIDIN 63
Query: 81 RRILEHYFHIHSIVISSVTDIDDKIINKA 109
RRIL+ YF + + +VTDIDDKII KA
Sbjct: 64 RRILQDYFGYNVKFVQNVTDIDDKIIIKA 92
>gi|72389845|ref|XP_845217.1| cysteinyl-tRNA synthetase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359925|gb|AAX80350.1| cysteinyl-tRNA synthetase, putative [Trypanosoma brucei]
gi|70801752|gb|AAZ11658.1| cysteinyl-tRNA synthetase, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 785
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 189/357 (52%), Gaps = 43/357 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYK--TVAKRYF 199
GHA + DI+RRI+E +F I ++TDIDDKII +A +SL ++ T+
Sbjct: 75 GHARAYLTFDILRRIMEDFFGYKVIYQMNITDIDDKIIKRARVSSLLRHFRDVTLEGGNM 134
Query: 200 LRLI-FKILHQKVVRKLAIDLKKAKVDSGPVLTKCD---EFRDELLALGV---QIKDQKC 252
+L+ F + Q+ + + ++ + P T E ++++ L + Q D
Sbjct: 135 EKLVKFTVEAQRSASRALSETREKLSQALPEGTSSRVRMEREEKIMELALKETQFSDTSG 194
Query: 253 EATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFN---FRYELEYFES 309
K G D +F + I LL L TV + +F+ RYE +FE
Sbjct: 195 RIQSAIKAGDF--DELFDAASG----INGDLLDQLEGHTVTDQKIFDDHARRYERLFFED 248
Query: 310 MEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF-------PHY 362
M++ GV P TRV+E++P + +FIQ ++D AY G + SV+FD +F P
Sbjct: 249 MKRLGVKDPDVITRVTEYVPQVVNFIQRIMDNGFAYSG-ETSVFFDTTAFIRAGHNYPKL 307
Query: 363 FKLWGRNE-NITQHAV--------------KRSPFDFALWKSAKPGEPWYESAWGKGRPG 407
+ R+E N T+ + KRSP DFALWK +KPGEP + S WG GRPG
Sbjct: 308 KPISERDECNTTEAEMAEGEGALAACVAGEKRSPNDFALWKFSKPGEPHWPSPWGAGRPG 367
Query: 408 WHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
WHIECS MAS G +D+H+GG DLKFPHH+NE AQS A+ Q QWVNY+LH GHL
Sbjct: 368 WHIECSVMASDILGTNMDIHSGGCDLKFPHHDNECAQSEAYSMQHQWVNYFLHCGHL 424
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P D + + N +T+ F + ++WY CGPTVYD H+GHA + D
Sbjct: 25 PPWYPPLNVDGNDVCVLNSMTECLEKFAPREGRLVRWYTCGPTVYDVSHMGHARAYLTFD 84
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
I+RRI+E +F I ++TDIDDKII +A
Sbjct: 85 ILRRIMEDFFGYKVIYQMNITDIDDKIIKRA 115
>gi|261328614|emb|CBH11592.1| cysteinyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
DAL972]
Length = 785
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 189/357 (52%), Gaps = 43/357 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYK--TVAKRYF 199
GHA + DI+RRI+E +F I ++TDIDDKII +A +SL ++ T+
Sbjct: 75 GHARAYLTFDILRRIMEDFFGYKVIYQMNITDIDDKIIKRARVSSLLRHFRDVTLEGGNM 134
Query: 200 LRLI-FKILHQKVVRKLAIDLKKAKVDSGPVLTKCD---EFRDELLALGV---QIKDQKC 252
+L+ F + Q+ + + ++ + P T E ++++ L + Q D
Sbjct: 135 EKLVKFTVEAQRSASRALSETREKLSQALPEGTSSRVRMEREEKIMELALKETQFSDTSG 194
Query: 253 EATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFN---FRYELEYFES 309
K G D +F + I LL L TV + +F+ RYE +FE
Sbjct: 195 RIQSAIKAGDF--DELFDAASG----INGDLLDQLEGHTVTDQKIFDDHARRYERLFFED 248
Query: 310 MEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF-------PHY 362
M++ GV P TRV+E++P + +FIQ ++D AY G + SV+FD +F P
Sbjct: 249 MKRLGVKDPDVITRVTEYVPQVVNFIQRIMDNGFAYSG-ETSVFFDTTAFIRAGHNYPKL 307
Query: 363 FKLWGRNE-NITQHAV--------------KRSPFDFALWKSAKPGEPWYESAWGKGRPG 407
+ R+E N T+ + KRSP DFALWK +KPGEP + S WG GRPG
Sbjct: 308 KPISERDECNTTEAEMAEGEGALAACVAGEKRSPNDFALWKFSKPGEPHWPSPWGAGRPG 367
Query: 408 WHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
WHIECS MAS G +D+H+GG DLKFPHH+NE AQS A+ Q QWVNY+LH GHL
Sbjct: 368 WHIECSVMASDILGTNMDIHSGGCDLKFPHHDNECAQSEAYSMQHQWVNYFLHCGHL 424
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P D + + N +T+ F + ++WY CGPTVYD H+GHA + D
Sbjct: 25 PPWYPPLNVDGNDVCVLNSMTECLEKFAPREGRLVRWYTCGPTVYDVSHMGHARAYLTFD 84
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
I+RRI+E +F I ++TDIDDKII +A
Sbjct: 85 ILRRIMEDFFGYKVIYQMNITDIDDKIIKRA 115
>gi|156543451|ref|XP_001601176.1| PREDICTED: cysteinyl-tRNA synthetase, mitochondrial-like [Nasonia
vitripennis]
Length = 515
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 85/164 (51%), Positives = 115/164 (70%), Gaps = 1/164 (0%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+YE E+ M+ VL P +V+ +IP I F++ +++ AY+G D SVYFD ++
Sbjct: 126 KYEKEFISDMDSLNVLKPFATCKVTNYIPQIVEFVEKIVNKNGAYVGKDGSVYFDTSNYR 185
Query: 361 HYFKLWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+Y KL + H KRS DFALWK++K EP++ES WG+GRPGWHIECSA+AS
Sbjct: 186 NYGKL-DTPQAQEPHPDKRSSLDFALWKASKENEPYWESPWGRGRPGWHIECSAIASTVL 244
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+H+GG+DL FPHHENEEAQSC +H ++QW+NYWLHTGHL
Sbjct: 245 GSNIDIHSGGMDLAFPHHENEEAQSCCYHEKNQWINYWLHTGHL 288
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 73/103 (70%)
Query: 21 KWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDII 80
KW PSG++T + +YNPITK K P I++N WY CGPTVYDS HIGHA VK DII
Sbjct: 25 KWIKPSGFETNVVVYNPITKCKTPLILRNNKVATWYMCGPTVYDSAHIGHACTYVKFDII 84
Query: 81 RRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
RRIL +F I+ +++ +TDIDDKII +AN + ++++ ++Y
Sbjct: 85 RRILSEFFDINVVLVMGLTDIDDKIIKRANESGQSWQSITQKY 127
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA VK DIIRRIL +F I+ +++ +TDIDDKII +AN + ++++ ++Y I
Sbjct: 73 GHACTYVKFDIIRRILSEFFDINVVLVMGLTDIDDKIIKRANESGQSWQSITQKYEKEFI 132
Query: 204 FKILHQKVVRKLA 216
+ V++ A
Sbjct: 133 SDMDSLNVLKPFA 145
>gi|383855612|ref|XP_003703304.1| PREDICTED: cysteine--tRNA ligase, cytoplasmic-like isoform 1
[Megachile rotundata]
Length = 733
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 195/363 (53%), Gaps = 41/363 (11%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RR+L YF + + + ++TDIDDKII +A N L E Y + + + L
Sbjct: 57 GHARSYISFDILRRVLSDYFGYNVLYVMNITDIDDKIIKRARQNYLYEKY--IEENHALD 114
Query: 202 LIFKILHQKVVRKLAIDLKKAK-VDSGPVLTKC---DEFRDELLALGVQIKDQKCEATWQ 257
I + V+ +K VD +L K E E L V++KD+ +Q
Sbjct: 115 EILDDA-KNVMCTFEDTVKTTNDVDKKCMLQKMLHDVEKAIENLENAVKLKDENKIKEYQ 173
Query: 258 FKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLP 317
K D PL L + G +F L +E E+ + M+ VL
Sbjct: 174 ELLLKEARD------PLAEWLDKNK--GATVTEHSIFTKLSQ-NWEAEFHKDMDSLNVLK 224
Query: 318 PTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF----PHYF-----KLWGR 368
P TRVSE+IP I +F++ +++ AY S+ SVYFDV +F HY+ + +G
Sbjct: 225 PNVLTRVSEYIPEIIAFVKKIIENGVAY-ESNGSVYFDVAAFDKQDKHYYAKLVPEAYGD 283
Query: 369 NENITQ---------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHF 419
++ + + KRSP DFALWKS+K GEPW++S WGKGRPGWHIECS MAS
Sbjct: 284 TSSLEEGEGVLSTHESSEKRSPTDFALWKSSKEGEPWWDSPWGKGRPGWHIECSVMASII 343
Query: 420 FGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRRLRAAR 477
G +D+HTGG+DLKFPHH+NE AQ+ A+ N S WV Y+LH GHL G ++ L+
Sbjct: 344 CGESLDIHTGGVDLKFPHHDNEIAQAEAYFNNSNWVRYFLHAGHLTISGCKMSKSLK--N 401
Query: 478 FIT 480
FIT
Sbjct: 402 FIT 404
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 65/100 (65%), Gaps = 3/100 (3%)
Query: 20 PKWSLPSGYDTGI-KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W+ P +T + K+YN +T+ K FI Q N + WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PPWAPPQRKNTSVLKLYNSLTRDKEVFIPQFGNRILWYSCGPTVYDASHMGHARSYISFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY 116
I+RR+L YF + + + ++TDIDDKII +A N L E Y
Sbjct: 67 ILRRVLSDYFGYNVLYVMNITDIDDKIIKRARQNYLYEKY 106
>gi|308198189|ref|XP_001387132.2| cysteinyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
gi|149389073|gb|EAZ63109.2| cysteinyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
Length = 776
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 152/500 (30%), Positives = 233/500 (46%), Gaps = 99/500 (19%)
Query: 9 LALSYATSCESPKWSLPSGYDTG---IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDS 65
+++S P+W P G +KIYN +T++K F+ H+ WY CGPTVYD
Sbjct: 12 ISMSTVKKVTQPEWHAPQPSAVGKPVLKIYNSLTRSKTEFVPIVPGHITWYCCGPTVYDH 71
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFL 125
H+GHA V DI RRI + YF + I +VTDIDDKII A ++Y
Sbjct: 72 SHMGHARNYVSTDICRRIFQDYFGYNVKFIQNVTDIDDKIIIAAR----------QQYLF 121
Query: 126 PLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKAN 185
++Q+V + + + + L + + DI + I A+
Sbjct: 122 EQKLSGVYQQVNSELVAKSEEYLT---SYVEKNLPEF---------TGKDIKSEFIAWAD 169
Query: 186 SLKEDYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGV 245
S+ + + +AK + F ++ K R+ + V + P+ E+ + + +
Sbjct: 170 SIASNVQDIAKE---KPKFP-MYLKAARRAHDAIYSTNVLATPIA----EYLESIKEVAT 221
Query: 246 QIKDQKCEATWQFKDGKVFSDRVFISLPLY------LILIQVSLLGPLTLRTVVFEFLFN 299
D++ +T V +F LP + + ++++L P T+ T V E++ +
Sbjct: 222 PSLDKEFGST-------VNDPSIFRKLPSFWENKFDQDMARLNVL-PSTVTTRVSEYIPD 273
Query: 300 FRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF 359
+E+ + + + G PT+ D SVYFD F
Sbjct: 274 I---IEFIDKIIENGFGYPTK----------------------------DGSVYFDTAKF 302
Query: 360 PH-----YFKL--W----------GRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWG 402
+ Y KL W G T K+S DFALWK++KPGEP + S WG
Sbjct: 303 ENDPNHDYAKLQPWNKGDMSLINDGEGSLTTGQDTKKSSADFALWKASKPGEPSWPSKWG 362
Query: 403 KGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
+GRPGWHIECS MAS G +D+H+GGIDL FPHH+NE AQS A+ + QWVNY++H+G
Sbjct: 363 EGRPGWHIECSVMASDITGQTMDIHSGGIDLCFPHHDNELAQSEAYFDNKQWVNYFMHSG 422
Query: 463 HL--RGTDGTRRLRAARFIT 480
HL +G ++ L+ FIT
Sbjct: 423 HLHIQGQKMSKSLK--NFIT 440
>gi|367012371|ref|XP_003680686.1| hypothetical protein TDEL_0C05860 [Torulaspora delbrueckii]
gi|359748345|emb|CCE91475.1| hypothetical protein TDEL_0C05860 [Torulaspora delbrueckii]
Length = 746
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 138/364 (37%), Positives = 190/364 (52%), Gaps = 37/364 (10%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA V +DI RRIL YF + + +VTDIDDKII +A N L E + K +
Sbjct: 72 GHARNYVSIDINRRILSDYFGYNIKFVQNVTDIDDKIIIRARQNYLFEKFLKENKTLDIE 131
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKC----EATWQ 257
+ L + L I+ K+ VD + K +F +E + KD K A +
Sbjct: 132 EVRSALLAYAEKNLKINQVKS-VDEIEIALKALDFENE------KSKDPKFPMHYTAVQR 184
Query: 258 FKDG--KVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGV 315
+G S+ F+++ ++ G VF L + +E ++ M+K V
Sbjct: 185 AIEGLKAPNSESSFVNVKDVVMPHLDEKHGSSVTEPEVFRELPAY-WEEQFDNDMKKLNV 243
Query: 316 LPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK-------LWGR 368
LPP+ TRVSE++P I F+ ++D Y D SVYFD F K W R
Sbjct: 244 LPPSVTTRVSEYVPEIVDFVSKIIDNGYGYATEDGSVYFDTVKFDSSEKHDYAKNQPWNR 303
Query: 369 NE---------NIT-QHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
+ N++ + K+SP DFALWK++KPGEP ++S WG GRPGWHIECS MAS
Sbjct: 304 GQLDLIKEGEGNLSIASSGKKSPNDFALWKASKPGEPRWDSPWGPGRPGWHIECSVMASD 363
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRRLRAA 476
G +D+H+GGIDL FPHH+NE AQS A + QWVNY+LHTGHL G ++ L+
Sbjct: 364 ILGSNMDIHSGGIDLAFPHHDNELAQSEACFDNEQWVNYFLHTGHLHIEGQKMSKSLK-- 421
Query: 477 RFIT 480
FIT
Sbjct: 422 NFIT 425
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 20 PKWSLPSGYDTG--IKIYNPITKTKVPFIIQNKNHL-KWYACGPTVYDSPHIGHAVCNVK 76
PKW P+ +K+YN +TK K FI Q+ L WY+CGPTVYD+ H+GHA V
Sbjct: 20 PKWYEPNVQKEKRVLKLYNSLTKNKDVFIPQSGGRLVTWYSCGPTVYDASHMGHARNYVS 79
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
+DI RRIL YF + + +VTDIDDKII +A
Sbjct: 80 IDINRRILSDYFGYNIKFVQNVTDIDDKIIIRA 112
>gi|343477222|emb|CCD11886.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 772
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 135/364 (37%), Positives = 185/364 (50%), Gaps = 57/364 (15%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFL--R 201
GHA + DI+RRI+E YF + + ++TDIDDKII +A + +FL R
Sbjct: 66 GHARAYLTFDILRRIVEDYFGYNVLYQMNITDIDDKIIKRART-----------FFLLDR 114
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEF----------------RDELLALGV 245
+ L KL K+A++ + L +C + RDE L + +
Sbjct: 115 FRRETLRGVDFDKLVAFTKEAQIAAEKTLLECGKRLEEPLPDNASNHIRLERDEKL-MEL 173
Query: 246 QIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFN---FRY 302
+K + + + D K S F L I LL +V + +F R+
Sbjct: 174 NLKRTQLQELKELID-KAISSGSFEELFDVASGINGDLLDQQEGHSVTDQRIFADHARRF 232
Query: 303 ELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH- 361
E +FE M + GV P TRV+E++P++ FI+ ++D AY G + SV+FD +F
Sbjct: 233 EQLFFEDMRRLGVRDPDVITRVTEYVPNVVDFIRRIMDNGFAYCG-ESSVFFDTAAFIRA 291
Query: 362 ---YFKL---------------WGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESA 400
Y KL E + AV KRSP DFALWK +KPGEP + S
Sbjct: 292 GHSYPKLKPVSDRGESDATDAEMAEGEGVLTRAVTGEKRSPNDFALWKFSKPGEPQWPSP 351
Query: 401 WGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLH 460
WG GRPGWHIECS MAS G +D+H+GG DLKFPHH+NE AQS A++ Q QWVNY+LH
Sbjct: 352 WGPGRPGWHIECSVMASDILGANMDIHSGGCDLKFPHHDNECAQSEAYNMQHQWVNYFLH 411
Query: 461 TGHL 464
GHL
Sbjct: 412 CGHL 415
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 20 PKWSLPSGYDTG-IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P G + +++ N +T+T F ++ +++WY CGPTVYD+ H+GHA + D
Sbjct: 16 PPWFAPVGRGSDDLRVLNSLTETVEVFTPRDGRNIRWYMCGPTVYDASHMGHARAYLTFD 75
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKANSL 112
I+RRI+E YF + + ++TDIDDKII +A +
Sbjct: 76 ILRRIVEDYFGYNVLYQMNITDIDDKIIKRARTF 109
>gi|157865847|ref|XP_001681630.1| putative cysteinyl-tRNA synthetase [Leishmania major strain
Friedlin]
gi|68124928|emb|CAJ02484.1| putative cysteinyl-tRNA synthetase [Leishmania major strain
Friedlin]
Length = 784
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 141/396 (35%), Positives = 203/396 (51%), Gaps = 50/396 (12%)
Query: 104 KIINKANSLKEDYKTVAKRYFL-----PLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRI 158
K++N ED+ R P ++ + H GHA + DIIRRI
Sbjct: 39 KVMNSLTETLEDFAPRDGRVVRWYTCGPTVYDLSHM---------GHARAYLTFDIIRRI 89
Query: 159 LEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRY--FLRLIFKILHQKVVRK 214
+E YF I ++TDIDDKII +A N L D+K R+ +L+ +
Sbjct: 90 MEDYFGYSVIYQMNITDIDDKIIKRARVNKLLVDFKEEELRHSDVAKLMAFTAEAVAAAE 149
Query: 215 LAIDLKKAKVDSGPVL----TKCDEFRDELLALGVQIKDQKCEATWQFKDGKVFSDRVFI 270
+ +KA + P+ ++ R+E L L VQ+K+ + T K + F
Sbjct: 150 SGLAKRKAALVE-PIAKGTNSRAKADREEKL-LEVQLKESQLVET---KVKIAAAKDDFA 204
Query: 271 SLPLYLILIQVSLLGPLTLRTVVFEFLFN---FRYELEYFESMEKFGVLPPTRATRVSEF 327
+L + LL + +V + +F +YE +FE M++ G+ P TRV+E+
Sbjct: 205 ALFAAASGVNGDLLDERSGHSVSDQQIFEDHARKYERAFFEDMQRLGIREPDIVTRVTEY 264
Query: 328 IPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH----YFKLW-GRNENITQHAV----- 377
+P + F+Q ++D AY G + SV+FD +++ Y KL G + N T+ +
Sbjct: 265 VPQVVEFVQKIIDNGFAYAG-ETSVFFDTEAYIRAGHDYPKLKPGGDRNTTEDEMAEGEG 323
Query: 378 ---------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHT 428
KRSP DFALWK +KPGEP + S WG+GRPGWHIECS MAS G +D+H+
Sbjct: 324 VLSKGIEGEKRSPNDFALWKFSKPGEPRWPSPWGEGRPGWHIECSVMASDILGENMDIHS 383
Query: 429 GGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
GG DLKFPHH+NE AQS A + SQWVNY+LH GHL
Sbjct: 384 GGWDLKFPHHDNECAQSEACNLHSQWVNYFLHCGHL 419
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P D G+K+ N +T+T F ++ ++WY CGPTVYD H+GHA + D
Sbjct: 25 PAWYPPLKLDGNGLKVMNSLTETLEDFAPRDGRVVRWYTCGPTVYDLSHMGHARAYLTFD 84
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRY 123
IIRRI+E YF I ++TDIDDKII +A N L D+K R+
Sbjct: 85 IIRRIMEDYFGYSVIYQMNITDIDDKIIKRARVNKLLVDFKEEELRH 131
>gi|365988256|ref|XP_003670959.1| hypothetical protein NDAI_0F03980 [Naumovozyma dairenensis CBS 421]
gi|343769730|emb|CCD25716.1| hypothetical protein NDAI_0F03980 [Naumovozyma dairenensis CBS 421]
Length = 791
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 195/374 (52%), Gaps = 53/374 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY-KTVAKRYFL 200
GHA V +DI RRI+E+YF + +VTDIDDKII +A N L E Y K + +
Sbjct: 102 GHARNYVSIDINRRIMENYFGYDINFVQNVTDIDDKIIIRARQNYLFEQYVKENSTAIDI 161
Query: 201 RLIFKILHQKVVRKL-------------AIDLKKAKVDSGPVLTKCDEFRDELLALGVQI 247
I L + + + L +IDL+K K + + LLAL
Sbjct: 162 SYIKTALSEYITKNLKLEGGDEFQSWLSSIDLEKEKELNPKLPMHIKAIETALLALTSIP 221
Query: 248 KDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYF 307
K+ + + +++ + +PL + +L P +F L F +E +Y
Sbjct: 222 KNPE-------EINNFYNNVKDVLVPLLDEQLGSTLNDP-----ELFRKLPAF-WERQYD 268
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HY 362
+ M K V+PP+ TRVSE+IP I F++ ++ AY SD SVYFD F Y
Sbjct: 269 KDMAKLNVMPPSITTRVSEYIPEIIVFVEKIIANGYAYATSDGSVYFDTIKFDSASNHDY 328
Query: 363 FKL--WGRNE------------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGW 408
K W + + N T ++ K+S DFALWK++KPGEP +ES WG GRPGW
Sbjct: 329 AKCQPWNKGQLDLIEDAEGSLSNFT-NSNKKSKNDFALWKASKPGEPQWESPWGTGRPGW 387
Query: 409 HIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RG 466
HIECS MAS G +D+H+GGIDL FPHH+NE AQS A + QWVNY+LHTGHL G
Sbjct: 388 HIECSVMASDVHGQSMDIHSGGIDLAFPHHDNELAQSEAKFDNCQWVNYFLHTGHLHIEG 447
Query: 467 TDGTRRLRAARFIT 480
++ L+ FIT
Sbjct: 448 QKMSKSLK--NFIT 459
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 67/106 (63%), Gaps = 9/106 (8%)
Query: 20 PKWSLPSGYDTG------IKIYNPITKTKVPFIIQN-KNHLKWYACGPTVYDSPHIGHAV 72
PKW PS + +K+YN +T+TK PFI Q+ + WY+CGPTVYD+ H+GHA
Sbjct: 46 PKWYKPSPKNDAATNSHVLKLYNTLTRTKEPFIPQSGTKQVSWYSCGPTVYDASHMGHAR 105
Query: 73 CNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY 116
V +DI RRI+E+YF + +VTDIDDKII +A N L E Y
Sbjct: 106 NYVSIDINRRIMENYFGYDINFVQNVTDIDDKIIIRARQNYLFEQY 151
>gi|19115476|ref|NP_594564.1| cytoplasmic cysteine-tRNA ligase Crs1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|1351621|sp|Q09860.1|SYC_SCHPO RecName: Full=Probable cysteine--tRNA ligase; AltName:
Full=Cysteinyl-tRNA synthetase; Short=CysRS
gi|1044932|emb|CAA91428.1| putative cysteinyl-trna synthetase [Schizosaccharomyces pombe]
gi|6723893|emb|CAB66469.1| cytoplasmic cysteine-tRNA ligase Crs1 (predicted)
[Schizosaccharomyces pombe]
Length = 754
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/368 (36%), Positives = 191/368 (51%), Gaps = 37/368 (10%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS--LKEDYKTVAKRYFLR 201
GHA V DI+RRIL+ YF + + +VTDIDDKII +A L E+YK K+
Sbjct: 57 GHARNYVTTDILRRILQSYFGYNITFVQNVTDIDDKIILRARQQYLFEEYK---KQQGTN 113
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEF-----------RDELLALGVQIKDQ 250
+KV KK + +++ ++ + L + V
Sbjct: 114 KSHSEAREKVTEAWFAYAKKNLPEPPSSMSEWPQWLASHDIPTLAINNPKLPMHVDALKS 173
Query: 251 KCEATWQFKDGKVFS-DRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFES 309
+A + ++ S D + + L+ + + LG +F L + +E ++ +
Sbjct: 174 ALDALQVSEASEIISLDGFWPKVQDVLVPLLDAELGSTVTDPAIFRKLAAY-WEDDFNKD 232
Query: 310 MEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH----YFKL 365
M VLPPT TRVSE++P I F+Q ++D AY +D SVYFD ++F Y KL
Sbjct: 233 MANLNVLPPTAVTRVSEYVPEIVDFVQRIIDRGYAYPVTDGSVYFDTEAFEKGGHFYAKL 292
Query: 366 --W--GRNENITQH-------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
W G E I + K+ P DFALWK++KPGEP ++S W KGRPGWHIECS
Sbjct: 293 EPWNKGNRELIAEGEGSLAALTGKKRPGDFALWKASKPGEPSWDSPWSKGRPGWHIECSV 352
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRR 472
MAS G +D+H+GGIDL FPHH+NE AQS A+ + QWVNY+ H GHL G ++
Sbjct: 353 MASALLGSNIDIHSGGIDLAFPHHDNELAQSEAYFDCPQWVNYFFHAGHLHIEGQKMSKS 412
Query: 473 LRAARFIT 480
L+ FIT
Sbjct: 413 LK--NFIT 418
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
Query: 22 WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
W +P G T + +YN +T +KVPF+ N ++L WY CGPTVYD+ H+GHA V DI+R
Sbjct: 11 WGVPKGQRTELYVYNTLTHSKVPFV-SNGSNLTWYCCGPTVYDASHMGHARNYVTTDILR 69
Query: 82 RILEHYFHIHSIVISSVTDIDDKIINKANS--LKEDYK 117
RIL+ YF + + +VTDIDDKII +A L E+YK
Sbjct: 70 RILQSYFGYNITFVQNVTDIDDKIILRARQQYLFEEYK 107
>gi|393905408|gb|EJD73963.1| cysteinyl tRNA synthetase 1 [Loa loa]
Length = 760
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/394 (35%), Positives = 200/394 (50%), Gaps = 39/394 (9%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPTR------GHAVCNVKLDIIRRILEHYFHIHSIVIS 171
T K F+PL K + + G PT GHA + DI+RR+L+ YF I
Sbjct: 40 TRKKELFVPLKPKQIKWYICG--PTVYDSSHIGHARAYLSFDILRRVLQDYFGYDIQYIM 97
Query: 172 SVTDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLT 231
++TDIDDKII +A L +A ++ + K++ + LA+D K+K
Sbjct: 98 NITDIDDKIIKRARQLYLLENYIAGKFGELSMTKVIEDTL---LALDKFKSKCIDETDPD 154
Query: 232 KCDEFRDELLALGVQIKDQKCEATW-QFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLR 290
K D + V +K +C + ++ + + + + L SL
Sbjct: 155 KKTMLADMCANVNVAVKKLECSLLQSEHQESEKSKNELLDAAKDVLSDWLDSLYRHTVSD 214
Query: 291 TVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDH 350
VF+ L +YE E+ M VLPPT TRVSE++P I ++++ ++D Y D
Sbjct: 215 LAVFDRLAK-KYENEFLYDMACLNVLPPTVLTRVSEYVPEIIAYVEKIIDNGYGYATKDG 273
Query: 351 SVYFDVDSFPH-----YFKL----WGRNENITQHA-------------VKRSPFDFALWK 388
SVYFD F + Y KL + NE++ ++ KR+ DFALWK
Sbjct: 274 SVYFDTVKFDNTEKHCYCKLVPEAFSDNEHLMKNMRESEGDLSMGNLQSKRNVTDFALWK 333
Query: 389 SAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF 448
++K GEP++ S WGKGRPGWHIECSAM+S G +D+H GG DLKFPHH+NE AQ A+
Sbjct: 334 ASKDGEPYWNSPWGKGRPGWHIECSAMSSKICGSSLDIHAGGFDLKFPHHDNEIAQVEAY 393
Query: 449 HNQSQWVNYWLHTGHLR--GTDGTRRLRAARFIT 480
++ WVNY+LH G LR G ++ L+ FIT
Sbjct: 394 YDIENWVNYFLHCGSLRIAGLKMSKSLK--NFIT 425
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 17 CESPKWSLPSGYDTG-IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNV 75
C W LP + +YN T+ K F+ +KWY CGPTVYDS HIGHA +
Sbjct: 17 CPQKTWKLPVAEQPPHLYLYNSFTRKKELFVPLKPKQIKWYICGPTVYDSSHIGHARAYL 76
Query: 76 KLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL 112
DI+RR+L+ YF I ++TDIDDKII +A L
Sbjct: 77 SFDILRRVLQDYFGYDIQYIMNITDIDDKIIKRARQL 113
>gi|169646833|ref|NP_001112372.1| cysteinyl-tRNA synthetase, cytoplasmic [Danio rerio]
Length = 824
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/344 (38%), Positives = 181/344 (52%), Gaps = 32/344 (9%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RRIL++YF ++TDIDDKII +A N L E Y+ K +
Sbjct: 144 GHARSYISFDILRRILKNYFKYDVFYCMNITDIDDKIIKRARQNYLLEQYRE-KKPSAAQ 202
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLA-LGVQIKDQKCEATWQFKD 260
++ +L + K + + D +L + D D L L V ++ + + + Q K
Sbjct: 203 ILQDVLTARTPFKAKL-AETTDPDKKQMLERLDSAVDAALGPLQVAVQSKAAQDSIQ-KQ 260
Query: 261 GKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTR 320
+V + L +L S G +F L + +E EY + ME VLPP
Sbjct: 261 AQVLLEEAKDLLSDWLD----SQFGSQVTENSIFSLLPKY-WEGEYHKDMEALNVLPPDV 315
Query: 321 ATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV---DSFP--HYFKLW----GRNEN 371
TRVSE++P I F++ ++D Y S+ SVYFD DS P Y KL G +
Sbjct: 316 LTRVSEYVPEIVEFVKKIVDNGYGY-ESNGSVYFDTAKFDSCPAHSYAKLVPEAVGDQKA 374
Query: 372 ITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+ + + KRS DFALWK++KPGEP ++S WG GRPGWHIECSAMA
Sbjct: 375 LQEGEGDLSISADRLSEKRSQNDFALWKASKPGEPSWDSPWGMGRPGWHIECSAMAGSIL 434
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+H GG DL+FPHH+NE AQS A+ WV Y+LHTGHL
Sbjct: 435 GESMDIHGGGFDLRFPHHDNELAQSEAYFENDYWVRYFLHTGHL 478
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P WS P G D + +++YN +T+TK F+ Q N + WY CGPTVYD+ H+GHA + D
Sbjct: 94 PPWSPPEGTDISKLRLYNSLTRTKEVFVPQKGNRVLWYCCGPTVYDASHMGHARSYISFD 153
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVG 138
I+RRIL++YF ++TDIDDKII +A +++Y R P +IL +
Sbjct: 154 ILRRILKNYFKYDVFYCMNITDIDDKIIKRA---RQNYLLEQYREKKPSAAQILQDVLTA 210
Query: 139 SIP 141
P
Sbjct: 211 RTP 213
>gi|307178002|gb|EFN66863.1| Cysteinyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
Length = 738
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 189/349 (54%), Gaps = 43/349 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RRIL YF + + ++TDIDDKII +A N L EDY V + + L
Sbjct: 57 GHARSYISFDILRRILSDYFGYDVLYVMNITDIDDKIIKRARQNYLYEDY--VKQNHSLD 114
Query: 202 LIFKILHQKV------VRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEAT 255
+ + + VR KK ++ +L K + ++L V+ KD+ A
Sbjct: 115 YMLHDMEAVICTVDGTVRTTTDPDKKCMIEK--MLYKITKAIEDL-EKAVKGKDKDQIAL 171
Query: 256 WQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGV 315
+Q K F + + L +L G +F L + +E E+ + M+ V
Sbjct: 172 YQ----KEFLEEIKDPLATWL----DKKYGKDVTEHSIFTKL-SKDWESEFHKDMDALNV 222
Query: 316 LPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH-----YFKL----W 366
L P TRVSE+IP I +F+Q ++D AY S+ SVYFDV F Y KL +
Sbjct: 223 LRPNVLTRVSEYIPEIIAFVQKVIDNGFAY-ESNGSVYFDVGKFDKQEKHSYAKLVPEAY 281
Query: 367 GRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAM 415
G ++ + + KRS DFALWKS+K GEPW++S WGKGRPGWHIECS M
Sbjct: 282 GDTSSLQEGEGDLSVTEDRLSEKRSVTDFALWKSSKTGEPWWDSPWGKGRPGWHIECSVM 341
Query: 416 ASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AS G +D+HTGG+DLKFPHH+NE AQ+ A+ + S WV Y+LH+GHL
Sbjct: 342 ASAICGESLDIHTGGVDLKFPHHDNEIAQAEAYFDNSNWVKYFLHSGHL 390
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Query: 20 PKWSLPSGYDTGI-KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W LP DT + ++YN +T+ K F+ Q N + WY CGPTVYD+ H+GHA + D
Sbjct: 7 PAWHLPERKDTSVLRLYNSLTREKEVFVPQFGNRVLWYCCGPTVYDASHMGHARSYISFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY 116
I+RRIL YF + + ++TDIDDKII +A N L EDY
Sbjct: 67 ILRRILSDYFGYDVLYVMNITDIDDKIIKRARQNYLYEDY 106
>gi|28856175|gb|AAH48039.1| Cars protein, partial [Danio rerio]
Length = 652
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/344 (38%), Positives = 181/344 (52%), Gaps = 32/344 (9%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RRIL++YF ++TDIDDKII +A N L E Y+ K +
Sbjct: 65 GHARSYISFDILRRILKNYFKYDVFYCMNITDIDDKIIKRARQNYLLEQYRE-KKPSAAQ 123
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLA-LGVQIKDQKCEATWQFKD 260
++ +L + K + + D +L + D D L L V ++ + + + Q K
Sbjct: 124 ILQDVLTARTPFKAKL-AETTDPDKKQMLERLDSAVDAALGPLQVAVQSKAAQDSIQ-KQ 181
Query: 261 GKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTR 320
+V + L +L S G +F L + +E EY + ME VLPP
Sbjct: 182 AQVLLEEAKDLLSDWLD----SQFGSQVTENSIFSLLPKY-WEGEYHKDMEALNVLPPDV 236
Query: 321 ATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV---DSFP--HYFKLW----GRNEN 371
TRVSE++P I F++ ++D Y S+ SVYFD DS P Y KL G +
Sbjct: 237 LTRVSEYVPEIVEFVKKIVDNGYGY-ESNGSVYFDTAKFDSCPAHSYAKLVPEAVGDQKA 295
Query: 372 ITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+ + + KRS DFALWK++KPGEP ++S WG GRPGWHIECSAMA
Sbjct: 296 LQEGEGDLSISADRLSEKRSQNDFALWKASKPGEPSWDSPWGMGRPGWHIECSAMAGSIL 355
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+H GG DL+FPHH+NE AQS A+ WV Y+LHTGHL
Sbjct: 356 GESMDIHGGGFDLRFPHHDNELAQSEAYFESDYWVRYFLHTGHL 399
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P WS P G D + +++YN +T+TK F+ Q N + WY CGPTVYD+ H+GHA + D
Sbjct: 15 PPWSPPEGTDISKLRLYNSLTRTKEVFVPQKGNRVLWYCCGPTVYDASHMGHARSYISFD 74
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVG 138
I+RRIL++YF ++TDIDDKII +A +++Y R P +IL +
Sbjct: 75 ILRRILKNYFKYDVFYCMNITDIDDKIIKRA---RQNYLLEQYREKKPSAAQILQDVLTA 131
Query: 139 SIP 141
P
Sbjct: 132 RTP 134
>gi|393228503|gb|EJD36147.1| hypothetical protein AURDEDRAFT_140124 [Auricularia delicata
TFB-10046 SS5]
Length = 780
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 183/372 (49%), Gaps = 70/372 (18%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V D++RRI+ YF + + +VTD+DDKII +A + +F + +
Sbjct: 66 GHARNYVTTDVLRRIMRDYFGFEVVFVQNVTDVDDKIIMRAREI---------HFFKQYV 116
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCD-----------EFRDELLALGVQIKDQKC 252
+ H + + + D++KA SG L K + E+ L+A+
Sbjct: 117 SQ--HPTIDQTVLDDVRKAFTWSGANLKKANFPSDLAPAAFAEWSKSLIAM--------L 166
Query: 253 EATWQFKDGKVFSDRVFISLPLYLILIQVSLLGP---LTLRTVVFEFL------------ 297
A Q +D +V SL + IQ L + V EFL
Sbjct: 167 AAKPQLEDDEVKLKNKLASLGKVAVAIQNPPLATEFYAAIEGVFSEFLGETLKETIDGRE 226
Query: 298 ------FNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHS 351
F+ R+E + M VLPPT TRVSEFI SF++ +++ AY + S
Sbjct: 227 HGIFSSFSQRWEEHFNTDMRTLNVLPPTVTTRVSEFIAENVSFVERVVEKGFAYHDGEGS 286
Query: 352 VYFDVDSFPHYFKLWGRNENITQH-------------AVKR---SPFDFALWKSAKPGEP 395
VYFD+D+F + R E ++ AVKR S DFALWK A+PGEP
Sbjct: 287 VYFDIDAFERAGNFYARLEPGNRNDAGKLAEGEGALSAVKRKKKSDRDFALWKVARPGEP 346
Query: 396 WYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS--- 452
+ S WG+GRPGWHIECSAMA G Q+D+H+GGIDL FPHH+NE AQS AF +
Sbjct: 347 RWPSPWGEGRPGWHIECSAMAGAVLGSQIDVHSGGIDLAFPHHDNELAQSEAFWYEGAPR 406
Query: 453 QWVNYWLHTGHL 464
QW+NY+ H GHL
Sbjct: 407 QWINYFWHMGHL 418
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Query: 19 SPKWSLPSGYDT----GIKIYNPITKTKVPFIIQNK--NHLKWYACGPTVYDSPHIGHAV 72
+P W+ P+ + ++N +T KVPF+ + + WY CGPTVYD+ H+GHA
Sbjct: 10 APAWAQPTRAQNVSLPPLLVHNSLTHAKVPFVPLDPAGRRVTWYCCGPTVYDAGHLGHAR 69
Query: 73 CNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL 112
V D++RRI+ YF + + +VTD+DDKII +A +
Sbjct: 70 NYVTTDVLRRIMRDYFGFEVVFVQNVTDVDDKIIMRAREI 109
>gi|213401855|ref|XP_002171700.1| cysteinyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
gi|211999747|gb|EEB05407.1| cysteinyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
Length = 766
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 127/369 (34%), Positives = 189/369 (51%), Gaps = 37/369 (10%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS--LKEDY----KTVAKR 197
GHA V DI+RRIL++YF+ + +VTDIDDKII +A L E Y
Sbjct: 58 GHARNYVTTDILRRILQNYFNYDITFVQNVTDIDDKIIVRARQKYLLEQYIQEHTNACDS 117
Query: 198 YFLRLIFKILHQKVVRKLAIDLKKAKV--------DSGPVLTKCDEFRDELLALGVQIKD 249
L+ + + + + + ++ K D + + + AL +
Sbjct: 118 EVLKTVREAWTEYAKKNIPEPVESEKEWAEWLKSHDVATLSATSPKLPMRVSALSSSLAA 177
Query: 250 -QKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFE 308
+ E + + D K + + S+ L+ + LG VF L + +E ++ +
Sbjct: 178 VELAEKSNELDDAK--TAWFWESVQDVLVPVLDDKLGSTVTDPAVFRKLAAY-WEDDFNK 234
Query: 309 SMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP---HYF-- 363
M VLPPT TRVSE++P I F++ +++ AY D SVYFD ++F H++
Sbjct: 235 DMRALNVLPPTVVTRVSEYMPEIVDFVKKIIERGYAYAVEDGSVYFDTEAFSAAGHFYAK 294
Query: 364 -KLWGRNEN---------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
+ W +N + K+ P DFALWK++K GEP+++S WGKGRPGWHIECS
Sbjct: 295 IEPWNKNNRELIDEGEGALAARTGKKRPGDFALWKASKSGEPFWDSPWGKGRPGWHIECS 354
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTR 471
MA G +D+H+GGIDL FPHH+NE AQS AF + QW+NY+ H GHL G ++
Sbjct: 355 VMAGTILGSNIDIHSGGIDLAFPHHDNELAQSEAFFDCPQWINYFFHMGHLHIEGQKMSK 414
Query: 472 RLRAARFIT 480
L+ FIT
Sbjct: 415 SLK--NFIT 421
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 11 LSYATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGH 70
+S A + SP W P G T + +N +T TK PFI N + L WY CGPTVYD+ H+GH
Sbjct: 1 MSSAKTKASP-WIQPKGTTTPLIAFNSMTHTKTPFIAPNGHSLTWYCCGPTVYDASHMGH 59
Query: 71 AVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
A V DI+RRIL++YF+ + +VTDIDDKII +A
Sbjct: 60 ARNYVTTDILRRILQNYFNYDITFVQNVTDIDDKIIVRA 98
>gi|366999570|ref|XP_003684521.1| hypothetical protein TPHA_0B04170 [Tetrapisispora phaffii CBS 4417]
gi|357522817|emb|CCE62087.1| hypothetical protein TPHA_0B04170 [Tetrapisispora phaffii CBS 4417]
Length = 766
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 135/371 (36%), Positives = 190/371 (51%), Gaps = 46/371 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY--------KT 193
GHA V +DI RRIL+ YF + + +VTD+DDKII +A N L + + T
Sbjct: 76 GHARNYVSIDINRRILQDYFGYNVNFVQNVTDVDDKIILRARQNYLFDKFVESNQTIDDT 135
Query: 194 VAKRY---FLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQ 250
V K+ L+ I K L Q+ ++ ID K + S V K + D + V +
Sbjct: 136 VVKKVMDSLLQYISKKLKQEDIK--TIDEYKVWMKSVDVEQK--KIEDPKFPMHVTAINN 191
Query: 251 KCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESM 310
A D + + + +PL + ++ P R + +E ++ M
Sbjct: 192 AVRALSNVNDKEFYPLVKDVFVPLLDKELGSTIKDPEVFRKLPA------YWEDQFNNDM 245
Query: 311 EKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL 365
K V P TRVSE+IP I +FI+ ++ AY SD SVYF+ F HY K
Sbjct: 246 AKLNVQFPDVTTRVSEYIPEIITFIEKIIANGYAYATSDGSVYFNTSKFDKAENHHYAKC 305
Query: 366 --WGRNE------------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIE 411
W + + N + K+S DFALWK++KPGEP ++S WGKGRPGWHIE
Sbjct: 306 QPWNKGQLDLINDAEGSLSNFSDLNGKQSASDFALWKASKPGEPEWQSPWGKGRPGWHIE 365
Query: 412 CSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDG 469
CS M S+ G +D+H+GG+DL FPHH+NE AQS A + QW+NY+LHTGHL G
Sbjct: 366 CSVMCSYILGENIDIHSGGVDLAFPHHDNELAQSEAHFDNDQWINYFLHTGHLHIEGQKM 425
Query: 470 TRRLRAARFIT 480
++ L+ FIT
Sbjct: 426 SKSLK--NFIT 434
>gi|259482994|tpe|CBF77996.1| TPA: cysteinyl-tRNA synthetase (AFU_orthologue; AFUA_5G09610)
[Aspergillus nidulans FGSC A4]
Length = 833
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 132/379 (34%), Positives = 195/379 (51%), Gaps = 49/379 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKAN-------------SLKED 190
GHA V DIIRRI+ YF + + ++TD+DDKII +A ++ E+
Sbjct: 96 GHARNYVSTDIIRRIMRDYFKFNVHFVMNITDVDDKIILRARQQHLFTKFVTAHPTVDEE 155
Query: 191 YKTVAKRYFLRLIFKILHQKVVRKLAIDLKK------AKVDSGPVLTKCDEFRDELLALG 244
VAK+ + + K L D K A + +G L ++ D+ +
Sbjct: 156 VLDVAKKAYAAYLKKNLPLLSPELPPSDYSKEVEKAYAVILNGGPLPGNEKAGDDEAKIK 215
Query: 245 VQIKDQKCEATWQFKDGKV-------FSDRVFISLPLYLILIQVSLLGPLTLRT--VVFE 295
+ IK A + K+ F +R + L+ +L G L +F
Sbjct: 216 MHIKTVSSAANVIVEAEKLDKSAQGTFPERFYTDAQDLLLPYLDALEGSLIDADDHSIFT 275
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFD 355
L +YE + + M+ VL P TRV+E+ I F++ +++ K Y+ +D SVYFD
Sbjct: 276 KLTR-KYEERFMKDMDDLNVLRPDELTRVTEYGQEIADFVEKIVENKFGYVSADGSVYFD 334
Query: 356 VDSFPH----YFKL--WGRNEN----------ITQHAVKRSPFDFALWKSAKPGEPWYES 399
+++F Y +L W R++N + KRS DFALWKS+KPGEP + S
Sbjct: 335 INAFEAAGFPYARLEPWSRSDNKLLAEGEGSLANKTTEKRSKSDFALWKSSKPGEPSWSS 394
Query: 400 AWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF--HNQSQWVNY 457
+WG+GRPGWHIECSAMAS G +D+H+GGIDL FPHH+NE AQS A+ + QWVNY
Sbjct: 395 SWGRGRPGWHIECSAMASARLGKHMDIHSGGIDLAFPHHDNELAQSEAYWHSHGDQWVNY 454
Query: 458 WLHTGHL--RGTDGTRRLR 474
+LH GHL +G+ ++ L+
Sbjct: 455 FLHMGHLSIQGSKMSKSLK 473
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 67/110 (60%), Gaps = 7/110 (6%)
Query: 7 SSLALSYATSCESPKWSLPSGYDTG-----IKIYNPITKTKVPFIIQNKNHLK--WYACG 59
S LA AT+ E P W P+ + +K+YN +TK+K PFI + + K WYACG
Sbjct: 27 SVLARFMATAREQPAWRQPTAHPEAQSLPSLKVYNSLTKSKTPFIPIDPHGKKVTWYACG 86
Query: 60 PTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
PTVYD H+GHA V DIIRRI+ YF + + ++TD+DDKII +A
Sbjct: 87 PTVYDDAHLGHARNYVSTDIIRRIMRDYFKFNVHFVMNITDVDDKIILRA 136
>gi|357614211|gb|EHJ68965.1| putative cysteinyl-tRNA synthetase [Danaus plexippus]
Length = 480
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 120/186 (64%), Gaps = 5/186 (2%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+YE E++ M V P TRVSE I I F+ +LL++ AY G D S+YFD FP
Sbjct: 99 KYEHEFWIDMSSLNVEKPMIITRVSEHIDTIGQFVHSLLESGMAYAGKDGSIYFDTSKFP 158
Query: 361 HYFKLWGRNENITQ--HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
Y KL + ++I + + KR+ DFALWK KPGEP + +G GRPGWHIECSAM S
Sbjct: 159 DYGKL-QKVQDIREPSNEYKRNKMDFALWKGYKPGEPSWPMKFGDGRPGWHIECSAMVSK 217
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGH--LRGTDGTRRLRAA 476
FG Q+D H GGIDL+FPHHENEEAQ+CAFHN QW NYWLH GH L+ T ++ L+
Sbjct: 218 VFGTQLDFHAGGIDLRFPHHENEEAQACAFHNTRQWANYWLHVGHLNLKETKMSKSLKNT 277
Query: 477 RFITNL 482
I ++
Sbjct: 278 ILIPDI 283
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 70/100 (70%)
Query: 24 LPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRI 83
+P+G G +YN + + +VP I+ + WY+CGPTVYDS HIGHA C VKLDII+RI
Sbjct: 1 MPNGNPIGAYVYNCVAEQRVPIILNDPTIATWYSCGPTVYDSAHIGHASCYVKLDIIQRI 60
Query: 84 LEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
L+ +F+I + +TDIDDKII K+ K D++TVAK+Y
Sbjct: 61 LKSFFNIKLVTAMGITDIDDKIIKKSQETKTDFRTVAKKY 100
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 41/55 (74%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA C VKLDII+RIL+ +F+I + +TDIDDKII K+ K D++TVAK+Y
Sbjct: 46 GHASCYVKLDIIQRILKSFFNIKLVTAMGITDIDDKIIKKSQETKTDFRTVAKKY 100
>gi|67468752|ref|XP_650386.1| cysteinyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
gi|56467004|gb|EAL45000.1| cysteinyl-tRNA synthetase, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 701
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 126/331 (38%), Positives = 176/331 (53%), Gaps = 19/331 (5%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI RRILE YF I ++TD+DDKII KA N L Y T +
Sbjct: 41 GHARTYLSTDIFRRILEDYFGYQVIQCMNITDVDDKIILKARKNLLISKYCTATPKVTAD 100
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDG 261
I + K I+ + + +L+ ++E + + + T
Sbjct: 101 TIKMMKEAWNEHKENIEKQMNETKDAAMLSLFKSQKEEYEKVFPTLDSFNGQNT-----A 155
Query: 262 KVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRA 321
+VF+ R+ + YL + Q + P+ ++ + +YE +F + G+ P
Sbjct: 156 EVFA-RMTDVIGKYLDVRQKETVDPIEMKEAAR--IHARKYEELFFADCDALGIRRPDVI 212
Query: 322 TRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNE-------NITQ 374
+RV+EFIP + +FIQ ++D AY S+ SVYFD SF +GR E +
Sbjct: 213 SRVTEFIPEVIAFIQKIIDNGYAY-ESNGSVYFDTASFRKAGMTYGRLEPWSVGDVDAPA 271
Query: 375 HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLK 434
K + DFALWK +K GEP +ES WG GRPGWHIECSAMAS+ FG +D+H+GG DLK
Sbjct: 272 DGEKHNKNDFALWKKSKAGEPSWESQWGPGRPGWHIECSAMASNVFGDTLDIHSGGEDLK 331
Query: 435 FPHHENEEAQSCAFHNQSQ-WVNYWLHTGHL 464
FPHHENE AQS A+ N+ + WV Y+LHTGHL
Sbjct: 332 FPHHENELAQSEAYFNKKESWVRYFLHTGHL 362
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K++N + + + + N ++WY CGPTVYD H+GHA + DI RRILE YF
Sbjct: 5 LKVHNTLKRDGLDNFVCN-GPIRWYCCGPTVYDDSHLGHARTYLSTDIFRRILEDYFGYQ 63
Query: 92 SIVISSVTDIDDKIINKA 109
I ++TD+DDKII KA
Sbjct: 64 VIQCMNITDVDDKIILKA 81
>gi|449703762|gb|EMD44153.1| cysteinyl-tRNA synthetase, putative [Entamoeba histolytica KU27]
Length = 701
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 126/331 (38%), Positives = 176/331 (53%), Gaps = 19/331 (5%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI RRILE YF I ++TD+DDKII KA N L Y T +
Sbjct: 41 GHARTYLSTDIFRRILEDYFGYQVIQCMNITDVDDKIILKARKNLLISKYCTATPKVTAD 100
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDG 261
I + K I+ + + +L+ ++E + + + T
Sbjct: 101 TIKMMKEAWNEHKENIEKQMNETKDAAMLSLFKSQKEEYEKVFPTLDSFNGQNT-----A 155
Query: 262 KVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRA 321
+VF+ R+ + YL + Q + P+ ++ + +YE +F + G+ P
Sbjct: 156 EVFA-RMTDVIGKYLDVRQKETVDPIEMKEAAR--IHARKYEELFFADCDALGIRRPDVI 212
Query: 322 TRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNE-------NITQ 374
+RV+EFIP + +FIQ ++D AY S+ SVYFD SF +GR E +
Sbjct: 213 SRVTEFIPEVIAFIQKIIDNGYAY-ESNGSVYFDTASFRKAGMTYGRLEPWSVGDVDAPA 271
Query: 375 HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLK 434
K + DFALWK +K GEP +ES WG GRPGWHIECSAMAS+ FG +D+H+GG DLK
Sbjct: 272 DGEKHNKNDFALWKKSKAGEPSWESQWGPGRPGWHIECSAMASNVFGDTLDIHSGGEDLK 331
Query: 435 FPHHENEEAQSCAFHNQSQ-WVNYWLHTGHL 464
FPHHENE AQS A+ N+ + WV Y+LHTGHL
Sbjct: 332 FPHHENELAQSEAYFNKKESWVRYFLHTGHL 362
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K++N + + + + N ++WY CGPTVYD H+GHA + DI RRILE YF
Sbjct: 5 LKVHNTLKRDGLDNFVCN-GPIRWYCCGPTVYDDSHLGHARTYLSTDIFRRILEDYFGYQ 63
Query: 92 SIVISSVTDIDDKIINKA 109
I ++TD+DDKII KA
Sbjct: 64 VIQCMNITDVDDKIILKA 81
>gi|255716136|ref|XP_002554349.1| KLTH0F03168p [Lachancea thermotolerans]
gi|238935732|emb|CAR23912.1| KLTH0F03168p [Lachancea thermotolerans CBS 6340]
Length = 773
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 144/419 (34%), Positives = 205/419 (48%), Gaps = 65/419 (15%)
Query: 104 KIINKANSLKEDYKTVAKRYFL------PLIFKILHQKVVGSIPTRGHAVCNVKLDIIRR 157
K+ N KED+ T++ + P ++ H GHA V +DI RR
Sbjct: 47 KLYNSLTRQKEDFVTISGDKNVTWYSCGPTVYDSSHM---------GHARNYVSIDINRR 97
Query: 158 ILEHYFHIHSIVISSVTDIDDKIINKANS--LKEDYKTVAKRYFLRLIFKILHQKVVRKL 215
IL+ YF + +VTD+DDKII +A L E + K LI + ++ + +
Sbjct: 98 ILQDYFGYRIRFVQNVTDVDDKIILRARQSHLFERFAAENKE-VTPLIQEKVNSALFAYI 156
Query: 216 AIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFK-------------DGK 262
+LKK+ + E++ +L + ++ EA +F +G
Sbjct: 157 EANLKKS-------FSSIGEYKAWFSSLDIS---KEKEANPKFAMYTSAVSDCITALEGT 206
Query: 263 VFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRAT 322
++ + LI + G +F L F +E E+ + M VL P+ T
Sbjct: 207 NDAETFLGLVKEVLIPVLDKESGSTINEPEIFRKLPAF-WEREFNKDMAALNVLEPSVTT 265
Query: 323 RVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH-----YFKL--WGRNE----- 370
RVSE++P I F++ ++D AY D SVYFD +F Y K W + +
Sbjct: 266 RVSEYVPEIVDFVKRIIDNGYAYATGDGSVYFDTVAFDKSEKHDYAKCQPWNKGKLDLIN 325
Query: 371 -------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQ 423
N + KRS DFALWKS+KPGEP ++S WGKGRPGWHIECS MA G
Sbjct: 326 DAEGSLSNFSSTNGKRSSNDFALWKSSKPGEPEWDSPWGKGRPGWHIECSVMACDVLGPN 385
Query: 424 VDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRRLRAARFIT 480
+D+HTGGIDL FPHH+NE AQS AF++ QWVNY+LHTGHL G ++ L+ FIT
Sbjct: 386 IDIHTGGIDLAFPHHDNEIAQSEAFYDNHQWVNYFLHTGHLHIEGQKMSKSLK--NFIT 442
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 10 ALSYATSCESPKWSLPSGYDTG--IKIYNPITKTKVPFI-IQNKNHLKWYACGPTVYDSP 66
A S PKW P + +K+YN +T+ K F+ I ++ WY+CGPTVYDS
Sbjct: 22 ATSSNVKVNQPKWRQPQEPEGAPRLKLYNSLTRQKEDFVTISGDKNVTWYSCGPTVYDSS 81
Query: 67 HIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
H+GHA V +DI RRIL+ YF + +VTD+DDKII +A
Sbjct: 82 HMGHARNYVSIDINRRILQDYFGYRIRFVQNVTDVDDKIILRA 124
>gi|242022617|ref|XP_002431736.1| Cysteinyl-tRNA synthetase, putative [Pediculus humanus corporis]
gi|212517051|gb|EEB18998.1| Cysteinyl-tRNA synthetase, putative [Pediculus humanus corporis]
Length = 728
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 199/383 (51%), Gaps = 45/383 (11%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS--LKEDYKTVAKRYFLR 201
GHA + DI+RR+L YF + ++TDIDDKII KA L +Y T + +
Sbjct: 57 GHARTYISFDILRRVLTEYFGYDVQYVMNITDIDDKIIRKARQEYLFTEYTTSSSKSVEE 116
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDG 261
++ K V K A+D +K D K F + L IK E + K+G
Sbjct: 117 IL---TDAKSVLKWAVDQEKNINDPD----KKTMFAKMVQKLEAAIK--VLENSTNAKEG 167
Query: 262 KVFSDRVFISLPLYLILIQV---SLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPP 318
D++ + LI + G +F L F +E + + M VLPP
Sbjct: 168 INVKDKLKVFFLDGKDLISNWLDQIKGHDVSDHSIFSSLSKF-WESAFHKDMSDLNVLPP 226
Query: 319 TRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF----PHYF-----KLWGRN 369
TRVSE+IP + +I+ ++D AY S+ SVYFDV +F H++ + +G +
Sbjct: 227 DVLTRVSEYIPEVIEYIKKIIDNGFAY-HSNGSVYFDVANFDTNKKHFYAKLVPEAYGDS 285
Query: 370 ENITQ-----------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
+++ + + K+S DFALWK++K GEPW+ES WG+GRPGWHIECS MAS
Sbjct: 286 KSLQEGEGDLSSTDERTSEKKSINDFALWKNSKSGEPWWESPWGRGRPGWHIECSVMASA 345
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR--------GTDGT 470
G +D+HTGG+DLKFPHH+NE AQ+ A+ + W+NY+LH+GHL +
Sbjct: 346 ICGSNIDIHTGGVDLKFPHHDNEIAQAEAYFGSNNWINYFLHSGHLTISGCKICIKKNSA 405
Query: 471 RRLRAARFITNLSGSTIGYTRDT 493
R+LR A F+ + T+ Y+ T
Sbjct: 406 RQLRIA-FLLHSWKDTLDYSPKT 427
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 20 PKWSLPSGYDTGI-KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W + G+ K+YN T+ K FI N + WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PSWEPLRESEKGVLKLYNSFTRQKEIFIPNVGNRVLWYSCGPTVYDASHMGHARTYISFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
I+RR+L YF + ++TDIDDKII KA
Sbjct: 67 ILRRVLTEYFGYDVQYVMNITDIDDKIIRKA 97
>gi|189234350|ref|XP_973716.2| PREDICTED: similar to cysteinyl-tRNA synthetase [Tribolium
castaneum]
Length = 501
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 121/172 (70%), Gaps = 1/172 (0%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
++E E+++ ++ V P RV+E + I++FI+ L+D +AY D+SVYFDV ++
Sbjct: 116 KFEAEFWKDLDALDVRRPDCVLRVTENMDVIKNFIRELIDKGKAYKAGDNSVYFDVGAYD 175
Query: 361 HYFKLWGRNENITQHA-VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHF 419
+Y KL E+ + + K+S DFALWK+AKPGE + S WGKGRPGWHIECSA+A H
Sbjct: 176 NYAKLQNIGEDAPEPSKFKKSKMDFALWKAAKPGEISWVSEWGKGRPGWHIECSALAGHV 235
Query: 420 FGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G ++D+H GGIDL+FPHHENEEAQSCA + + QWVNYWLHTGHL D +
Sbjct: 236 LGPEIDIHAGGIDLRFPHHENEEAQSCARYCRPQWVNYWLHTGHLHLKDSQK 287
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 82/106 (77%)
Query: 18 ESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
S +W P+G+DTGIK++N +TKVP I++NKN + WY CGPTVYDS HIGHA C VKL
Sbjct: 12 NSHRWVKPNGHDTGIKVFNCTARTKVPLIVKNKNLVTWYTCGPTVYDSSHIGHASCFVKL 71
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
DII+R+L HYF+++ + + ++TDIDDKII +AN+ K K +AK++
Sbjct: 72 DIIQRLLRHYFNLNVVTVMNITDIDDKIIARANTAKVPPKELAKKF 117
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 43/55 (78%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA C VKLDII+R+L HYF+++ + + ++TDIDDKII +AN+ K K +AK++
Sbjct: 63 GHASCFVKLDIIQRLLRHYFNLNVVTVMNITDIDDKIIARANTAKVPPKELAKKF 117
>gi|159490726|ref|XP_001703324.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280248|gb|EDP06006.1| predicted protein [Chlamydomonas reinhardtii]
Length = 665
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 171/344 (49%), Gaps = 19/344 (5%)
Query: 126 PLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA- 184
P ++ + H GHA + DI+RR+LE YF + +++ +VTD+DDKII +A
Sbjct: 56 PTVYDVAHM---------GHARNYLSFDIVRRVLEDYFGYNCLMVMNVTDVDDKIILRAR 106
Query: 185 -NSLKEDYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLAL 243
N L YK+ K F I + + +A KK V E E
Sbjct: 107 RNFLLAQYKSSGKSAEEVKEFTI--EAIQAGIAKQQKKVAEMEAMVAKDSTEAEAEPDEK 164
Query: 244 GVQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYE 303
+K + G+ R + + + +
Sbjct: 165 KRSFALRKVADLQEAVKGEALKGRQAAEALAAVQALGAAGERGGGGAEGEELGEVAPGFA 224
Query: 304 LEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYF 363
E+ E M+ G P TRVSE+IP I ++ ++ AY S+ SVYFD +F
Sbjct: 225 REFLEDMDALGCRRPDVLTRVSEYIPEIIEYVTRIIGNGMAY-ASNGSVYFDTQNFSAAL 283
Query: 364 KLWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQ 423
G E+ + + KRSP DFALWK+AKPGEP +ES WG GRPGWHIECSAMAS G +
Sbjct: 284 AAEG--ESNFETSEKRSPQDFALWKAAKPGEPAWESPWGVGRPGWHIECSAMASSIIGSR 341
Query: 424 VDLHTGGIDLKFPHHENEEAQSCAFHNQS---QWVNYWLHTGHL 464
+D+HTGG DL+FPHH+NE AQ+ A+++ QWVNY+LH GHL
Sbjct: 342 LDIHTGGEDLRFPHHDNELAQAEAYYHHDGCKQWVNYFLHCGHL 385
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 5/95 (5%)
Query: 32 IKIYNPITKTKVPFIIQ---NKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
+ +YN KVPF+ + WYACGPTVYD H+GHA + DI+RR+LE YF
Sbjct: 25 LMLYNSFVDEKVPFVPAAGPTSKQITWYACGPTVYDVAHMGHARNYLSFDIVRRVLEDYF 84
Query: 89 HIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAK 121
+ +++ +VTD+DDKII +A N L YK+ K
Sbjct: 85 GYNCLMVMNVTDVDDKIILRARRNFLLAQYKSSGK 119
>gi|310799373|gb|EFQ34266.1| tRNA synthetase class I catalytic domain-containing protein
[Glomerella graminicola M1.001]
Length = 804
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/385 (34%), Positives = 192/385 (49%), Gaps = 48/385 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRI+ HYF + ++TD+DDKII KA + E K+ ++
Sbjct: 42 GHARNYVSTDIIRRIMMHYFGADVKFVMNITDVDDKIIIKARRQRLLELEKQKSYSQDEL 101
Query: 200 LRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKC------- 252
+L + L + L+ A +D L + D ++LA G + K
Sbjct: 102 AKLALTAFRAYADKSLPL-LQSADLDENNYLERRDSAYGKVLAGGTLTGEGKPGDDEAKT 160
Query: 253 --------EATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYEL 304
A + KD K + I LP L + ++ T +F L E
Sbjct: 161 KMHISNMDNAAFAIKDKKFYPGIDEILLPYLDSLYKETID---TSDQTIFTDLTQ-SMER 216
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH--- 361
E+F+ M+ L P TRV+E++P I F+ ++D AY SD SVYFD+ +F
Sbjct: 217 EFFDDMDALNCLRPDVITRVTEYVPQIAEFVARIVDKGFAY-ESDGSVYFDITAFEKAGN 275
Query: 362 -YFKL--WGRNENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGW 408
Y +L RN+ Q KR+ DFALWK +K GEP+++S WG+GRPGW
Sbjct: 276 TYARLRPGNRNDKSLQEDGEGALSKNLGEKRNEGDFALWKKSKKGEPYWDSRWGQGRPGW 335
Query: 409 HIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFH-----NQSQWVNYWLHTGH 463
HIECS MAS G Q+D+H+GG+DL FPHH+NE AQS A++ + WVN +LH GH
Sbjct: 336 HIECSVMASDILGAQMDIHSGGVDLAFPHHDNELAQSEAYYVDNSKGEHTWVNNFLHMGH 395
Query: 464 L--RGTDGTRRLRAARFITNLSGST 486
L G+ ++ L+ + I + +T
Sbjct: 396 LSISGSKMSKSLKNFQTIQDALATT 420
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 32 IKIYNPITKTK-VPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+K++N + + VPF + WYACGPTVYD H+GHA V DIIRRI+ HYF
Sbjct: 4 LKLHNSLKPGQPVPFTPIKPGKVSWYACGPTVYDKSHLGHARNYVSTDIIRRIMMHYFGA 63
Query: 91 HSIVISSVTDIDDKIINKA 109
+ ++TD+DDKII KA
Sbjct: 64 DVKFVMNITDVDDKIIIKA 82
>gi|407044721|gb|EKE42784.1| cysteine--tRNA ligase [Entamoeba nuttalli P19]
Length = 701
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/331 (38%), Positives = 177/331 (53%), Gaps = 19/331 (5%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI RRILE YF I ++TD+DDKII KA N L Y T +
Sbjct: 41 GHARTYLSTDIFRRILEDYFGYQVIQCMNITDVDDKIILKARKNLLISKYCTATPKVTAD 100
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDG 261
I + K I+ + ++ +L+ ++E + + + T +
Sbjct: 101 TIKMMKEAWNEHKENIEKQMSETKDAAMLSLFKSQKEEYEKVFPTLDSFNGQNTVE---- 156
Query: 262 KVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRA 321
VF+ R+ + YL + Q + P+ ++ + +YE +F + G+ P
Sbjct: 157 -VFA-RMTDVIGKYLDVRQKESVDPIEMKEAAR--VHARKYEELFFADCDALGIRRPDVI 212
Query: 322 TRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNE-------NITQ 374
+RV+EFIP + +FIQ ++D AY S+ SVYFD SF +GR E +
Sbjct: 213 SRVTEFIPEVIAFIQKIIDNGYAY-ESNGSVYFDTASFRKAGMTYGRLEPWSVGDVDAPA 271
Query: 375 HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLK 434
K + DFALWK +K GEP +ES WG GRPGWHIECSAMAS+ FG +D+H+GG DLK
Sbjct: 272 DGEKHNKNDFALWKKSKAGEPSWESQWGPGRPGWHIECSAMASNVFGDTLDIHSGGEDLK 331
Query: 435 FPHHENEEAQSCAFHNQSQ-WVNYWLHTGHL 464
FPHHENE AQS A+ N+ + WV Y+LHTGHL
Sbjct: 332 FPHHENELAQSEAYFNKKESWVRYFLHTGHL 362
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++++N + + + + N ++WY CGPTVYD H+GHA + DI RRILE YF
Sbjct: 5 LRVHNTLKRDSLDNFVCN-GPIRWYCCGPTVYDDSHLGHARTYLSTDIFRRILEDYFGYQ 63
Query: 92 SIVISSVTDIDDKIINKA 109
I ++TD+DDKII KA
Sbjct: 64 VIQCMNITDVDDKIILKA 81
>gi|297687902|ref|XP_002821438.1| PREDICTED: cysteine--tRNA ligase, cytoplasmic isoform 1 [Pongo
abelii]
Length = 831
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/348 (37%), Positives = 181/348 (52%), Gaps = 40/348 (11%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RR+L+ YF ++TDIDDKII +A N L E Y+ KR
Sbjct: 149 GHARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYRE--KRPEAA 206
Query: 202 LIFKILHQKVVRKLAIDLKKA-KVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFK- 259
+ + + Q ++ ++ L + D +L E + VQ+ + E Q +
Sbjct: 207 QLLEDV-QAALKPFSVKLNETTDPDKKQML--------ERIQHAVQLATEPLEKAVQCRL 257
Query: 260 DGKVFSDRVFISLPLYLILIQV---SLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVL 316
G+ + V + L L+ S LG +F L F +E E+ ME VL
Sbjct: 258 TGEEVNSCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKF-WEGEFHRDMEALNVL 316
Query: 317 PPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK-LWGR------- 368
PP TRVSE++P I +F+Q ++D Y+ S+ SVYFD F K +G+
Sbjct: 317 PPDVLTRVSEYVPEIVNFVQKIVDNGYGYV-SNGSVYFDTAKFASSEKHSYGKLVPEAVG 375
Query: 369 NENITQH------------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
++N Q + KRSP DFALWK++KPGEP + WGKGRPGWHIECSAMA
Sbjct: 376 DQNALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMA 435
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+H GG DL+FPHH+NE AQS A+ WV Y+LHTGHL
Sbjct: 436 GTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 483
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P+WS P+G + +YN +T+ K FI Q+ + WY CGPTVYD+ H+GHA + D
Sbjct: 99 PQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFD 158
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYK 117
I+RR+L+ YF ++TDIDDKII +A N L E Y+
Sbjct: 159 ILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYR 199
>gi|297687904|ref|XP_002821439.1| PREDICTED: cysteine--tRNA ligase, cytoplasmic isoform 2 [Pongo
abelii]
gi|297687906|ref|XP_002821440.1| PREDICTED: cysteine--tRNA ligase, cytoplasmic isoform 3 [Pongo
abelii]
Length = 748
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/348 (37%), Positives = 181/348 (52%), Gaps = 40/348 (11%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RR+L+ YF ++TDIDDKII +A N L E Y+ KR
Sbjct: 66 GHARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYRE--KRPEAA 123
Query: 202 LIFKILHQKVVRKLAIDLKKA-KVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFK- 259
+ + + Q ++ ++ L + D +L E + VQ+ + E Q +
Sbjct: 124 QLLEDV-QAALKPFSVKLNETTDPDKKQML--------ERIQHAVQLATEPLEKAVQCRL 174
Query: 260 DGKVFSDRVFISLPLYLILIQV---SLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVL 316
G+ + V + L L+ S LG +F L F +E E+ ME VL
Sbjct: 175 TGEEVNSCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKF-WEGEFHRDMEALNVL 233
Query: 317 PPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK-LWGR------- 368
PP TRVSE++P I +F+Q ++D Y+ S+ SVYFD F K +G+
Sbjct: 234 PPDVLTRVSEYVPEIVNFVQKIVDNGYGYV-SNGSVYFDTAKFASSEKHSYGKLVPEAVG 292
Query: 369 NENITQH------------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
++N Q + KRSP DFALWK++KPGEP + WGKGRPGWHIECSAMA
Sbjct: 293 DQNALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMA 352
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+H GG DL+FPHH+NE AQS A+ WV Y+LHTGHL
Sbjct: 353 GTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 400
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P+WS P+G + +YN +T+ K FI Q+ + WY CGPTVYD+ H+GHA + D
Sbjct: 16 PQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFD 75
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYK 117
I+RR+L+ YF ++TDIDDKII +A N L E Y+
Sbjct: 76 ILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYR 116
>gi|170584986|ref|XP_001897270.1| cysteinyl tRNA synthetase protein 1, isoform b [Brugia malayi]
gi|158595316|gb|EDP33879.1| cysteinyl tRNA synthetase protein 1, isoform b, putative [Brugia
malayi]
Length = 768
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 200/396 (50%), Gaps = 43/396 (10%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPTR------GHAVCNVKLDIIRRILEHYFHIHSIVIS 171
T K F+PL K + + G PT GHA + DI+RR+L+ YF I
Sbjct: 42 TRKKELFVPLNPKQVKWYICG--PTVYDSSHIGHARAYLSFDILRRVLQDYFGYDIQYIM 99
Query: 172 SVTDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQKVVRKL--AIDLKKAKVDSGPV 229
++TDIDDKII +A L + + Y ++ KV++ A+D K K
Sbjct: 100 NITDIDDKIIKRARQL-----YLLENYTSGKFGELSMTKVIKDTLSALDKFKNKCIDETD 154
Query: 230 LTKCDEFRDELLALGVQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTL 289
K + D ++ V +K +C + S + ++ + L T+
Sbjct: 155 PDKKNMLADMCASVNVAVKKLECSLLQSEQQETEKSKNELLHAAKDVLSDWLDSLYKHTV 214
Query: 290 RTV-VFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGS 348
+ VF+ L +YE E+ M VLPPT TRVSE+IP I ++++ +++ Y+
Sbjct: 215 NDLAVFDRLAK-KYENEFLCDMASLNVLPPTVLTRVSEYIPEIIAYVEKIINNGYGYVTK 273
Query: 349 DHSVYFDVDSFPH-----YFKL----WGRNENITQHAV-------------KRSPFDFAL 386
D SVYFD F + Y KL + NE + ++ KR+ DFAL
Sbjct: 274 DGSVYFDTVKFDNSEKHSYCKLVPEAFADNEQLMKNMRESEGDLSMGNLENKRNVTDFAL 333
Query: 387 WKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSC 446
WK++K GEP++ S WGKGRPGWHIECSAM+S G +D+H GG DLKFPHH+NE AQ
Sbjct: 334 WKASKDGEPYWNSPWGKGRPGWHIECSAMSSKICGTSLDIHAGGFDLKFPHHDNEIAQVE 393
Query: 447 AFHNQSQWVNYWLHTGHLR--GTDGTRRLRAARFIT 480
A+++ WVNY+LH G LR G ++ L+ FIT
Sbjct: 394 AYYDIENWVNYFLHCGSLRIAGLKMSKSLK--NFIT 427
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 22 WSLPS-GYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDII 80
W P+ G + +YN T+ K F+ N +KWY CGPTVYDS HIGHA + DI+
Sbjct: 24 WKPPAAGTPPQLCLYNSFTRKKELFVPLNPKQVKWYICGPTVYDSSHIGHARAYLSFDIL 83
Query: 81 RRILEHYFHIHSIVISSVTDIDDKIINKANSL 112
RR+L+ YF I ++TDIDDKII +A L
Sbjct: 84 RRVLQDYFGYDIQYIMNITDIDDKIIKRARQL 115
>gi|344228620|gb|EGV60506.1| hypothetical protein CANTEDRAFT_127803 [Candida tenuis ATCC 10573]
Length = 769
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 191/368 (51%), Gaps = 40/368 (10%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V DI RRIL+ YF + + +VTDIDDKII A ++ Y K +
Sbjct: 76 GHARNYVSTDINRRILQDYFGYNVKFVQNVTDIDDKIIIAA---RQQYLFEEK---FANV 129
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLT-KCDEFRDELLALGVQIKDQKCEATWQFKDGK 262
+K L+ + ++ + + + P T EF ++ VQ +
Sbjct: 130 YKQLNADLTKETKLAFEFYLQKNLPAFTGNISEFGSWAQSVNVQEVAVVNPKFPMYIKAA 189
Query: 263 VFSDRVFIS----LPLYLILIQVSL-------LGPLTLRTVVFEFLFNFRYELEYFESME 311
V + S LP ++ +Q + LG ++F+ L +F +E ++ E M
Sbjct: 190 VKAYNAIHSESSDLPNFMSSVQEVVMPYLDKQLGSTVNDPLIFKKLPSF-WENKFDEDMG 248
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH-----YFKL- 365
K VLPP TRVSE+IP I F++T++ AY SD SVYFD F + Y KL
Sbjct: 249 KLNVLPPDVTTRVSEYIPEIIEFVETIIKNGFAYPTSDGSVYFDTVKFDNDSNHVYAKLQ 308
Query: 366 -W----------GRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
W G T K++ DFALWK++KPGEP + SAWG+GRPGWHIECS
Sbjct: 309 PWNKGDLSLINDGEGSLTTGQDSKKNAADFALWKASKPGEPSWSSAWGEGRPGWHIECSV 368
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRR 472
MAS G +D+H+GG+DL FPHH+NE AQS A + QW+NY+LH+GHL +G ++
Sbjct: 369 MASDILGSNIDIHSGGVDLCFPHHDNELAQSEACFDNKQWINYFLHSGHLHIQGQKMSKS 428
Query: 473 LRAARFIT 480
L+ FIT
Sbjct: 429 LK--NFIT 434
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 16 SCESPKWSLPSGYDTG--IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
S PKW P + +K+YN +T+ K FI + N + WY CGPTVYD H+GHA
Sbjct: 21 SATQPKWHQPEANNLPPVLKLYNSLTRNKDEFIPNSPNQITWYCCGPTVYDHSHMGHARN 80
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKII 106
V DI RRIL+ YF + + +VTDIDDKII
Sbjct: 81 YVSTDINRRILQDYFGYNVKFVQNVTDIDDKII 113
>gi|390470913|ref|XP_003734380.1| PREDICTED: LOW QUALITY PROTEIN: cysteine--tRNA ligase, cytoplasmic
[Callithrix jacchus]
Length = 832
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/354 (37%), Positives = 178/354 (50%), Gaps = 52/354 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RR+L YF ++TDIDDKII +A N L Y+
Sbjct: 149 GHARSYISFDILRRVLRDYFRFDVFYCMNITDIDDKIIKRARQNHLFRQYRE-------- 200
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRD-------ELLALGVQIKDQKCEA 254
+ +L D++ A + P L K +E D E + VQ+ + E
Sbjct: 201 ------KRPEAAQLLEDVQAALM---PFLVKLNETTDADKKQMLERIRHAVQLATEPLEK 251
Query: 255 TWQFK-DGKVFSDRVFISLPLYLILIQV---SLLGPLTLRTVVFEFLFNFRYELEYFESM 310
Q + G+ + RV + L L+ S LG +F L F +E E+ M
Sbjct: 252 AVQSRLTGEEVTSRVEVLLEEAKDLLSDWLDSTLGSDVTDNSIFSELPKF-WEGEFHRDM 310
Query: 311 EKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL 365
E VLPP TRVSE++P I +F+Q ++D Y+ S+ SVYFD F Y KL
Sbjct: 311 EALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYV-SNGSVYFDTVKFASSEKHSYGKL 369
Query: 366 ----WGRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHI 410
G + + + + KRSP DFALWK++KPGEP + WGKGRPGWHI
Sbjct: 370 VPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHI 429
Query: 411 ECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
ECSAMA G +D+H GG DL+FPHH+NE AQS A+ + V Y+LHTGHL
Sbjct: 430 ECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDERVRYFLHTGHL 483
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 20 PKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P+WS P+G + +YN +T+ K FI Q+ + WY CGPTVYD+ H+GHA + D
Sbjct: 99 PQWSPPAGTQPYRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFD 158
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
I+RR+L YF ++TDIDDKII +A
Sbjct: 159 ILRRVLRDYFRFDVFYCMNITDIDDKIIKRA 189
>gi|307181000|gb|EFN68774.1| Cysteinyl-tRNA synthetase, mitochondrial [Camponotus floridanus]
Length = 518
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 110/166 (66%), Gaps = 2/166 (1%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E E++ M K + P RV+++IP I F++ LL YI D SVYFD + +
Sbjct: 128 FETEFYADMNKLNIGEPYLYCRVTDYIPQIIHFVEELLTRNYGYITKDGSVYFDTNKYNK 187
Query: 362 YFKLWGRNENI--TQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHF 419
Y KL ++ +QH K+S DFALWK+AK EP + WG GRPGWHIECSA+AS
Sbjct: 188 YGKLKTSVHDVVKSQHPDKKSALDFALWKAAKNNEPSWRCPWGYGRPGWHIECSAIASAV 247
Query: 420 FGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
FG VD+H+GGIDL FPHHENEEAQSC +HN +QWVNYWLH GHL
Sbjct: 248 FGNSVDIHSGGIDLAFPHHENEEAQSCCYHNVNQWVNYWLHCGHLN 293
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 84/124 (67%), Gaps = 1/124 (0%)
Query: 1 CSILSQSSLALSYATSCE-SPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACG 59
C ++ +S T+C+ KW P GY T + +YNPITK KVP I++ +N LKWY CG
Sbjct: 5 CKLIRVCKRFVSTETNCQDGAKWIEPIGYQTAVSVYNPITKCKVPLILKTENVLKWYMCG 64
Query: 60 PTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTV 119
PTVYDS HIGHA +K DIIRRIL +YF+I +++ +TDIDDKII + +D+KT+
Sbjct: 65 PTVYDSAHIGHAATYIKSDIIRRILSNYFNIDILLVMGITDIDDKIIKCSIESGKDFKTL 124
Query: 120 AKRY 123
+K +
Sbjct: 125 SKHF 128
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA +K DIIRRIL +YF+I +++ +TDIDDKII + +D+KT++K +
Sbjct: 74 GHAATYIKSDIIRRILSNYFNIDILLVMGITDIDDKIIKCSIESGKDFKTLSKHF 128
>gi|307204345|gb|EFN83100.1| Cysteinyl-tRNA synthetase, mitochondrial [Harpegnathos saltator]
Length = 511
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 113/164 (68%), Gaps = 1/164 (0%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+E+E+ E M + V P RV++++P I F++ L+ + YI D SVYFD + +
Sbjct: 124 RFEMEFLEDMNRLNVREPYIYCRVTDYVPRIVHFVEKLIASGYGYILKDGSVYFDTNKYN 183
Query: 361 HYFKLWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
Y K+ + + T H K+S DFALWK+ K EP++ES WG+GRPGWHIECSA+AS F
Sbjct: 184 RYGKISIPSPDAT-HPDKKSTLDFALWKAGKSDEPFWESPWGRGRPGWHIECSAIASAVF 242
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+H+GGIDL FPHHENEEAQSC +H QWVNYWLH GHL
Sbjct: 243 GNSIDVHSGGIDLAFPHHENEEAQSCCYHGVDQWVNYWLHCGHL 286
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 81/120 (67%)
Query: 9 LALSYATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHI 68
L S A + +W P G+ T + +YNP+T+ KVP I++ KN LKWY CGPTVYDS HI
Sbjct: 11 LVSSEAKGRDRLQWVTPVGHQTEVVVYNPVTRCKVPLILKTKNVLKWYMCGPTVYDSAHI 70
Query: 69 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLI 128
GHA +K DIIRRIL +F+I +++ +TDIDDKII A K+D+K +A+R+ + +
Sbjct: 71 GHATTYIKSDIIRRILTDHFNIDVLLVMGITDIDDKIIKCALESKQDFKALARRFEMEFL 130
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA +K DIIRRIL +F+I +++ +TDIDDKII A K+D+K +A+R+ + +
Sbjct: 71 GHATTYIKSDIIRRILTDHFNIDVLLVMGITDIDDKIIKCALESKQDFKALARRFEMEFL 130
>gi|302848858|ref|XP_002955960.1| hypothetical protein VOLCADRAFT_66444 [Volvox carteri f.
nagariensis]
gi|300258686|gb|EFJ42920.1| hypothetical protein VOLCADRAFT_66444 [Volvox carteri f.
nagariensis]
Length = 650
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/376 (32%), Positives = 187/376 (49%), Gaps = 68/376 (18%)
Query: 126 PLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA- 184
P ++ + H GHA + DI+RR+LE YF + +++ +VTD+DDKII +A
Sbjct: 55 PTVYDVAHM---------GHARNYLSFDIVRRVLEDYFGYNCLMVMNVTDVDDKIILRAR 105
Query: 185 -NSLKEDYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLAL 243
N L YK K + + +D K+A D+ + + L
Sbjct: 106 RNYLLAQYKRSGK----------TPDEHTEERHVDGKRAGADA-----RMESSGRRKGGL 150
Query: 244 GVQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTL-------------- 289
G ++ + A+ + ++ P L L++ P+
Sbjct: 151 GEKMTSRSSPAS------SLELEKAVAPAPRALQLLETGASAPVDALIDLGGDYVAEALD 204
Query: 290 ----RTVVFEFLFNF---RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTK 342
V +F +YE E+ E M+ G P TRVSE++P I +++Q +LD
Sbjct: 205 RELGAAVTDPSVFRAHAAKYEREFLEDMDALGCRRPDVLTRVSEYMPEIVNYVQRILDNG 264
Query: 343 QAYIGSDHSVYFDVDSFPHYFKLWGR--------------NENITQHAVKRSPFDFALWK 388
AY+ S+ SVYFD +F +G+ E+ + + KRS DFALWK
Sbjct: 265 MAYV-SNGSVYFDTQNFRACGHTYGKLNPWAVGSAALAAEGESNFETSEKRSLQDFALWK 323
Query: 389 SAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF 448
++KPGEP ++S W +GRPGWHIECSAMAS G ++DLH+GG DL+FPHH+NE AQ+ A+
Sbjct: 324 ASKPGEPVWDSPWSQGRPGWHIECSAMASTIIGSRLDLHSGGEDLRFPHHDNELAQAEAY 383
Query: 449 HNQSQWVNYWLHTGHL 464
++ WVNY+LH GHL
Sbjct: 384 YHTEWWVNYFLHCGHL 399
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 8/109 (7%)
Query: 21 KWSLPSGYDTG---IKIYNPITKTKVPFII---QNKNHLKWYACGPTVYDSPHIGHAVCN 74
+W P+ T + +YN KVPF+ N + WYACGPTVYD H+GHA
Sbjct: 10 EWYPPAADGTQTAPLMLYNSFVDEKVPFVPVAGPNSRQITWYACGPTVYDVAHMGHARNY 69
Query: 75 VKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAK 121
+ DI+RR+LE YF + +++ +VTD+DDKII +A N L YK K
Sbjct: 70 LSFDIVRRVLEDYFGYNCLMVMNVTDVDDKIILRARRNYLLAQYKRSGK 118
>gi|391338818|ref|XP_003743752.1| PREDICTED: cysteine--tRNA ligase, cytoplasmic-like [Metaseiulus
occidentalis]
Length = 724
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/344 (37%), Positives = 173/344 (50%), Gaps = 50/344 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFL- 200
GHA + DIIRR+L YF + ++TDIDDKII +A N L E Y+
Sbjct: 60 GHARSYISFDIIRRVLSSYFGYDVFYVMNITDIDDKIIRRARQNFLFEQYRAAPNSSSTV 119
Query: 201 ----RLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATW 256
++ + L QK+ L++ D +L + DE LA D+ A W
Sbjct: 120 VGDGKIAVEKLRQKI-------LQEEDKDKKAMLERLVSAADEALA---NPADET--ALW 167
Query: 257 QFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVL 316
+ PL L S +G +F L + +E EYF M+ VL
Sbjct: 168 -----------TALKDPLADWLD--SKMGSTVTDHSIFNKL-SRHFEEEYFADMKALNVL 213
Query: 317 PPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF------------PHYF- 363
PP TRVSE++P I +++ ++ AY SVYFD + F P F
Sbjct: 214 PPDVVTRVSEYVPEIVEYVEKIIAQGFAY-EYQGSVYFDTNKFDKSNGHFYAKLLPEAFG 272
Query: 364 ---KLWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
L ++ Q A K+S DFALWK++KPGEP ++S WGKGRPGWHIECS MAS
Sbjct: 273 DEKALQEGEGDLCQGAQKKSASDFALWKASKPGEPEWDSPWGKGRPGWHIECSVMASALL 332
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+H+GG DLKFPHH+NE AQS A+ WV Y+LH+GHL
Sbjct: 333 GESMDIHSGGYDLKFPHHDNEIAQSEAYFGNDNWVRYFLHSGHL 376
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 20 PKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNH-LKWYACGPTVYDSPHIGHAVCNVKLD 78
P+W P + +K+YN +T+ K F+ QN + WY CGPTVYD+ H+GHA + D
Sbjct: 10 PRWVSPECREVPLKLYNSLTRDKEIFVPQNGGRRVTWYNCGPTVYDASHMGHARSYISFD 69
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTV 119
IIRR+L YF + ++TDIDDKII +A N L E Y+
Sbjct: 70 IIRRVLSSYFGYDVFYVMNITDIDDKIIRRARQNFLFEQYRAA 112
>gi|297687908|ref|XP_002821441.1| PREDICTED: cysteine--tRNA ligase, cytoplasmic isoform 4 [Pongo
abelii]
Length = 738
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/348 (37%), Positives = 181/348 (52%), Gaps = 40/348 (11%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RR+L+ YF ++TDIDDKII +A N L E Y+ KR
Sbjct: 56 GHARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYRE--KRPEAA 113
Query: 202 LIFKILHQKVVRKLAIDLKKA-KVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFK- 259
+ + + Q ++ ++ L + D +L E + VQ+ + E Q +
Sbjct: 114 QLLEDV-QAALKPFSVKLNETTDPDKKQML--------ERIQHAVQLATEPLEKAVQCRL 164
Query: 260 DGKVFSDRVFISLPLYLILIQV---SLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVL 316
G+ + V + L L+ S LG +F L F +E E+ ME VL
Sbjct: 165 TGEEVNSCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKF-WEGEFHRDMEALNVL 223
Query: 317 PPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK-LWGR------- 368
PP TRVSE++P I +F+Q ++D Y+ S+ SVYFD F K +G+
Sbjct: 224 PPDVLTRVSEYVPEIVNFVQKIVDNGYGYV-SNGSVYFDTAKFASSEKHSYGKLVPEAVG 282
Query: 369 NENITQH------------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
++N Q + KRSP DFALWK++KPGEP + WGKGRPGWHIECSAMA
Sbjct: 283 DQNALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMA 342
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+H GG DL+FPHH+NE AQS A+ WV Y+LHTGHL
Sbjct: 343 GTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 390
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 37 PITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVIS 96
P TK FI Q+ + WY CGPTVYD+ H+GHA + DI+RR+L+ YF
Sbjct: 24 PSFLTKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFDVFYCM 83
Query: 97 SVTDIDDKIINKA--NSLKEDYK 117
++TDIDDKII +A N L E Y+
Sbjct: 84 NITDIDDKIIKRARQNHLFEQYR 106
>gi|167540088|ref|XP_001733555.1| cysteinyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
gi|165893955|gb|EDR22070.1| cysteinyl-tRNA synthetase, cytoplasmic, putative [Entamoeba dispar
SAW760]
Length = 405
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/331 (38%), Positives = 176/331 (53%), Gaps = 19/331 (5%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI RRILE YF I ++TD+DDKII KA N L Y T +
Sbjct: 4 GHARTYLSTDIFRRILEDYFGYQVIQCMNITDVDDKIILKARKNLLISKYCTTTPKVNDD 63
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDG 261
I + K +I+ + + +L+ ++E + + + T +
Sbjct: 64 TIKMMKEAWNEHKESIEKQMGETKDAAMLSLFKSQKEEYEKVFPTLDSFNGQNTTE---- 119
Query: 262 KVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRA 321
VF+ R+ + YL + Q + P+ ++ +YE +F + G+ P
Sbjct: 120 -VFA-RMTDVIGKYLDIRQKESVDPIEMKEAARAHAR--KYEELFFADCDALGIRRPDVI 175
Query: 322 TRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNE-------NITQ 374
+RV+EFIP + +FIQ ++D AY S+ SVYFD SF +GR E +
Sbjct: 176 SRVTEFIPEVIAFIQKIIDNGYAY-ESNGSVYFDTASFRKAGMTYGRLEPWSVGDVDAPA 234
Query: 375 HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLK 434
K + DFALWK +K GEP +ES WG GRPGWHIECSAMAS+ FG +D+H+GG DLK
Sbjct: 235 DGEKHNKNDFALWKKSKAGEPSWESQWGPGRPGWHIECSAMASNVFGDTLDIHSGGEDLK 294
Query: 435 FPHHENEEAQSCAFHNQSQ-WVNYWLHTGHL 464
FPHHENE AQS A+ N+ + WV Y+LHTGHL
Sbjct: 295 FPHHENELAQSEAYFNKKESWVRYFLHTGHL 325
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 28/43 (65%)
Query: 67 HIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
H+GHA + DI RRILE YF I ++TD+DDKII KA
Sbjct: 2 HLGHARTYLSTDIFRRILEDYFGYQVIQCMNITDVDDKIILKA 44
>gi|401623994|gb|EJS42071.1| YNL247W [Saccharomyces arboricola H-6]
Length = 767
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 196/369 (53%), Gaps = 37/369 (10%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY-KTVAKRYFL 200
GHA V +DI RRI++ YF + + +VTDIDDKII +A N L E + K +
Sbjct: 74 GHARNYVSIDINRRIIQDYFGYNVQFVQNVTDIDDKIILRARQNYLFEKFVKENDGKVNA 133
Query: 201 RLIFKI---LHQKVVRKLAIDLKKAK-VDSGPV-LTKCD----EFRDELLALGVQIKDQK 251
++I K L Q + + I+ + K +D L+K D + + ++ V
Sbjct: 134 KVIDKAKTALFQYINKNFTIEGSEIKTIDEFDTWLSKADTETLKIENPKFSMHVTAVKNA 193
Query: 252 CEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESME 311
EA K + + F ++ + LG +F L + +E ++ + M
Sbjct: 194 IEAI--IKGDSMDPEVTFGKFKDVMVPLLDKELGSTISDPEIFRQLPAY-WEQKFNDDML 250
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV---DSFPHY----FK 364
VLPPT TRVSE++P I F+Q ++ AY SD SVYFD D P++ +
Sbjct: 251 SLNVLPPTVTTRVSEYVPEIIEFVQKIISNGYAYATSDGSVYFDTLRFDRAPNHDYAKCQ 310
Query: 365 LWGRNE----NITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
W + + N + ++ K+S DFALWK++K GEP +ES WGKGRPGWHIECS
Sbjct: 311 PWNKGQLDLINDAEGSLSNFVDNGKKSNNDFALWKASKAGEPEWESPWGKGRPGWHIECS 370
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTR 471
MAS G +D+H+GGIDL FPHH+NE AQS A + SQW+NY+LHTGHL G ++
Sbjct: 371 VMASDILGPNIDIHSGGIDLAFPHHDNELAQSEACFDNSQWINYFLHTGHLHIEGQKMSK 430
Query: 472 RLRAARFIT 480
L+ FIT
Sbjct: 431 SLK--NFIT 437
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Query: 20 PKWSLPS--GYDTGIKIYNPITKTKVPFIIQNKNH-LKWYACGPTVYDSPHIGHAVCNVK 76
PKW++P+ +K+YN +T++KV F+ Q+ N + WY+CGPTVYD+ H+GHA V
Sbjct: 22 PKWNVPAPQAEKVVLKLYNSLTRSKVEFVPQSGNRGVTWYSCGPTVYDASHMGHARNYVS 81
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
+DI RRI++ YF + + +VTDIDDKII +A
Sbjct: 82 IDINRRIIQDYFGYNVQFVQNVTDIDDKIILRA 114
>gi|366986529|ref|XP_003673031.1| hypothetical protein NCAS_0A00800 [Naumovozyma castellii CBS 4309]
gi|342298894|emb|CCC66640.1| hypothetical protein NCAS_0A00800 [Naumovozyma castellii CBS 4309]
Length = 785
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/392 (33%), Positives = 188/392 (47%), Gaps = 89/392 (22%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V +DI RRIL+ YF + +VTDIDDKII +A
Sbjct: 92 GHARNYVSIDINRRILQDYFGYDINFVQNVTDIDDKIIIRA------------------- 132
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGKV 263
Q + +D K VD+ V DE+ +K+ K + T F + +
Sbjct: 133 ----RQNYLFDQFVDAAKGSVDTEKVQLALDEYI---------VKNLKLDKTMNFDEFQK 179
Query: 264 FSDRVFIS--------LPLYLILIQVSLLGPLTLRTVVFEFLFNFR-------------- 301
+++ + + LP+++ I+ + TL +F N +
Sbjct: 180 WNESLDMEKEKEINPKLPMHITAIKNTFTALTTLTNEPDQFYKNVKDVLVPLLDKELGST 239
Query: 302 -------------YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGS 348
+E ++ M VL PT TRVSE++P I +F++ ++ AY +
Sbjct: 240 INDPEIFRKLPAYWERQFDTDMSNLNVLAPTITTRVSEYVPEIIAFVERIISNGYAYATT 299
Query: 349 DHSVYFDVDSF----PHYF---KLWGRNE-NITQHA----------VKRSPFDFALWKSA 390
D SVYFD F H + + W + + ++ + A KRS DFALWK++
Sbjct: 300 DGSVYFDTVKFDSSDKHAYAKCQPWNKGQLDLIEDAEGSLSNFVDSTKRSKNDFALWKAS 359
Query: 391 KPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHN 450
KPGEP ++S WG GRPGWHIECS MAS G +D+H+GGIDL FPHH+NE AQS A +
Sbjct: 360 KPGEPRWDSPWGAGRPGWHIECSVMASDVHGSSMDIHSGGIDLAFPHHDNELAQSEACFD 419
Query: 451 QSQWVNYWLHTGHL--RGTDGTRRLRAARFIT 480
QWVNY+LHTGHL G ++ L+ FIT
Sbjct: 420 NEQWVNYFLHTGHLHIEGQKMSKSLK--NFIT 449
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 5/95 (5%)
Query: 20 PKW---SLPSGYDT-GIKIYNPITKTKVPFI-IQNKNHLKWYACGPTVYDSPHIGHAVCN 74
PKW PS + +K+YN +T++K PF+ + + WY+CGPTVYD+ H+GHA
Sbjct: 38 PKWLKPQPPSDIEAHTLKLYNSLTRSKDPFVPLSGTKQVSWYSCGPTVYDASHMGHARNY 97
Query: 75 VKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
V +DI RRIL+ YF + +VTDIDDKII +A
Sbjct: 98 VSIDINRRILQDYFGYDINFVQNVTDIDDKIIIRA 132
>gi|451853787|gb|EMD67080.1| hypothetical protein COCSADRAFT_33961 [Cochliobolus sativus ND90Pr]
Length = 839
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 134/369 (36%), Positives = 184/369 (49%), Gaps = 51/369 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS------LKEDYKTVAKR 197
GHA V DI+RRIL HY+ + + ++TD+DDKII + K D TV +
Sbjct: 100 GHARNYVTNDILRRILAHYYGYNVKFVQNITDVDDKIILRGRQQHLLAKFKADNPTVTEE 159
Query: 198 Y----------FLRLIFKILHQKV---------VRKLAIDLKKAKVDS-GPVLTKCDEFR 237
+++ +L + V +K A ++ VD GP K + +
Sbjct: 160 VINTTIKAFDAYVKKNLPLLSEDVTIGSFNDESAQKYANVIQGKSVDGVGPAGDKEAKIK 219
Query: 238 DELLALGVQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFL 297
L G + + +D +VF L YL + S + VF L
Sbjct: 220 MHLRTAGTAVTSLLAPSKSTPEDIEVFYTGAEDVLLPYLDSLYGSSID--ASDHTVFTTL 277
Query: 298 FNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVD 357
+YE + E M VL P TRV+E+ I SF++ ++ AY SD SVYFD++
Sbjct: 278 TK-KYEARFNEDMRALNVLDPDVVTRVTEYGDQIVSFVEKIIKNGMAYSTSDGSVYFDIE 336
Query: 358 SFP-----HYFKL--WGRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYES 399
+F HY +L W R + Q + KR+ DFALWKS+KPGEP + S
Sbjct: 337 AFEKREGNHYARLEPWNRGDTNLQADGEGALSSVKTSEKRNESDFALWKSSKPGEPAWPS 396
Query: 400 AWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQ----SQWV 455
WG GRPGWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A+ +Q +QWV
Sbjct: 397 PWGPGRPGWHIECSVMASAVLGEQMDVHSGGIDLCFPHHDNELAQSEAYWSQEGRPTQWV 456
Query: 456 NYWLHTGHL 464
NY+LH GHL
Sbjct: 457 NYFLHMGHL 465
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 9 LALSYATSCESPKWSLPSGYDTG-IKIYNPITKTKVPF--IIQNKNHLKWYACGPTVYDS 65
LA + P W P G +K++N +T++K F I +KWY+CGPTVYD
Sbjct: 37 LAAMATPARTQPPWKQPQGSSPAKLKVWNSLTRSKNDFVPIDPEGKEVKWYSCGPTVYDD 96
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII 106
H+GHA V DI+RRIL HY+ + + ++TD+DDKII
Sbjct: 97 AHLGHARNYVTNDILRRILAHYYGYNVKFVQNITDVDDKII 137
>gi|443718182|gb|ELU08927.1| hypothetical protein CAPTEDRAFT_159831 [Capitella teleta]
Length = 645
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 117/176 (66%), Gaps = 4/176 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE ++F M K +LPPT TRV++++P + F+++++D AY S +VYFDVD F
Sbjct: 201 YEEDFFNDMAKLRILPPTLTTRVTDYVPEVIKFVESIMDNGLAYKTSKGTVYFDVDKFGR 260
Query: 362 YFKLWGRNENITQHA----VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y +L +N +I K S DFALWK+AKPGEP ++S WG GRPGWHIECS MAS
Sbjct: 261 YGRLQPQNPDILYREPLDKEKLSARDFALWKAAKPGEPSWDSPWGPGRPGWHIECSTMAS 320
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
FG Q+D+H+GG DLKFPHHENE AQS A QW NYWLHTG+L T ++
Sbjct: 321 GIFGEQLDIHSGGDDLKFPHHENEMAQSEACFGCHQWTNYWLHTGYLHQKQETTKM 376
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 63/92 (68%)
Query: 21 KWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDII 80
+W P GYDTGI +YN +T++K P I+ WY+CGPTVYD HIGHA ++DII
Sbjct: 99 EWIQPEGYDTGIVMYNSLTRSKEPLILPRGKFATWYSCGPTVYDKAHIGHASSYTRMDII 158
Query: 81 RRILEHYFHIHSIVISSVTDIDDKIINKANSL 112
RRIL +F I +++ +TDIDDKII K++ +
Sbjct: 159 RRILTDHFGIDVVLLMGITDIDDKIIRKSHEM 190
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL 187
GHA ++DIIRRIL +F I +++ +TDIDDKII K++ +
Sbjct: 147 GHASSYTRMDIIRRILTDHFGIDVVLLMGITDIDDKIIRKSHEM 190
>gi|383859559|ref|XP_003705261.1| PREDICTED: probable cysteine--tRNA ligase, mitochondrial-like
[Megachile rotundata]
Length = 525
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/167 (52%), Positives = 112/167 (67%), Gaps = 1/167 (0%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E+ E ++ V+ P RV+++IP I F+ +++ YI +D SVYFD +
Sbjct: 140 YEDEFIEDLKTLNVIKPNLYCRVTDYIPEIIQFVNGIVNKGYGYIATDGSVYFDTSKYDM 199
Query: 362 YFKLWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFG 421
Y KL G + H K+S DF LWK++K GEP++ES WGKGRPGWHIECS +AS FG
Sbjct: 200 YGKL-GIPLPDSAHPDKKSALDFCLWKASKEGEPFWESPWGKGRPGWHIECSTIASTVFG 258
Query: 422 GQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTD 468
VD+H+GGIDL FPHHENEEAQSC++H QWVNYWLH GHL D
Sbjct: 259 NCVDIHSGGIDLAFPHHENEEAQSCSYHEVQQWVNYWLHCGHLSLED 305
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 77/105 (73%)
Query: 19 SPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
+P+W P GY+T I IYNP+ K KVP I++NKN L WY CGPTVYDS HIGHA+ + LD
Sbjct: 36 APQWLKPIGYETNITIYNPVAKCKVPLILKNKNFLSWYVCGPTVYDSAHIGHAMTYMNLD 95
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
IIRRIL +F+++ I++ +TDIDDKII + + ++K +AK Y
Sbjct: 96 IIRRILTDHFNLNVIMVMCITDIDDKIIASSKRKQLNFKDLAKHY 140
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 39/55 (70%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA+ + LDIIRRIL +F+++ I++ +TDIDDKII + + ++K +AK Y
Sbjct: 86 GHAMTYMNLDIIRRILTDHFNLNVIMVMCITDIDDKIIASSKRKQLNFKDLAKHY 140
>gi|323352855|gb|EGA85157.1| YNL247W-like protein [Saccharomyces cerevisiae VL3]
Length = 637
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 196/373 (52%), Gaps = 45/373 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY-KTVAKRYFL 200
GHA V +DI RRI++ YF + +VTDIDDKII +A N L +++ K ++
Sbjct: 74 GHARNYVSIDINRRIIQDYFGYDVQFVQNVTDIDDKIILRARQNYLFDNFVKENDTKFNX 133
Query: 201 RLIFKI---LHQKVVRKLAIDLKKAKV--DSGPVLTKCD----EFRDELLALGVQIKDQK 251
++ K+ L Q + + I + K + L+ D + + + V
Sbjct: 134 TVVDKVKTALFQYINKNFTIQGSEIKTIEEFETWLSNADTETLKLENPKFPMHVTAVQNA 193
Query: 252 CEATWQFK--DGKVFSDRVF-ISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFE 308
E+ + D +V ++V +++PL + ++ P R + +E ++ +
Sbjct: 194 IESITKGDSMDAEVAFEKVKDVTVPLLDKELGSTISNPEIFRQLPA------YWEQKFND 247
Query: 309 SMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV---DSFPHY--- 362
M VLPPT TRVSE++P I F+Q ++D AY SD SVYFD D P++
Sbjct: 248 DMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNGYAYATSDGSVYFDTLKFDKSPNHDYA 307
Query: 363 -FKLWGRNE------------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWH 409
+ W + + N + K+S DFALWK++K GEP +ES WGKGRPGWH
Sbjct: 308 KCQPWNKGQLDLINDGEGSLSNFADNG-KKSNNDFALWKASKAGEPEWESPWGKGRPGWH 366
Query: 410 IECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGT 467
IECS MAS G +D+H+GGIDL FPHH+NE AQS A + QW+NY+LHTGHL G
Sbjct: 367 IECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQSEARFDNQQWINYFLHTGHLHIEGQ 426
Query: 468 DGTRRLRAARFIT 480
++ L+ FIT
Sbjct: 427 KMSKSLK--NFIT 437
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Query: 20 PKWSLPS--GYDTGIKIYNPITKTKVPFIIQNKNH-LKWYACGPTVYDSPHIGHAVCNVK 76
PKW +P+ +T +K+YN +T++KV FI Q+ N + WY+CGPTVYD+ H+GHA V
Sbjct: 22 PKWKVPTPQAKETVLKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVS 81
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
+DI RRI++ YF + +VTDIDDKII +A
Sbjct: 82 IDINRRIIQDYFGYDVQFVQNVTDIDDKIILRA 114
>gi|207341909|gb|EDZ69841.1| YNL247Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 610
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 196/373 (52%), Gaps = 45/373 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY-KTVAKRYFL 200
GHA V +DI RRI++ YF + +VTDIDDKII +A N L +++ K ++
Sbjct: 74 GHARNYVSIDINRRIIQDYFGYDVQFVQNVTDIDDKIILRARQNYLFDNFVKENDTKFNA 133
Query: 201 RLIFKI---LHQKVVRKLAIDLKKAKV--DSGPVLTKCD----EFRDELLALGVQIKDQK 251
++ K+ L Q + + I + K + L+ D + + + V
Sbjct: 134 TVVDKVKTALFQYINKNFTIQGSEIKTIEEFETWLSNADTETLKLENPKFPMHVTAVQNA 193
Query: 252 CEATWQFK--DGKVFSDRVF-ISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFE 308
E+ + D +V ++V +++PL + ++ P R + +E ++ +
Sbjct: 194 IESITKGDSMDAEVAFEKVKDVTVPLLDKELGSTISNPEIFRQLPA------YWEQKFND 247
Query: 309 SMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV---DSFPHY--- 362
M VLPPT TRVSE++P I F+Q ++D AY SD SVYFD D P++
Sbjct: 248 DMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNGYAYATSDGSVYFDTLKFDKSPNHDYA 307
Query: 363 -FKLWGRNE------------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWH 409
+ W + + N + K+S DFALWK++K GEP +ES WGKGRPGWH
Sbjct: 308 KCQPWNKGQLDLINDGEGSLSNFADNG-KKSNNDFALWKASKAGEPEWESPWGKGRPGWH 366
Query: 410 IECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGT 467
IECS MAS G +D+H+GGIDL FPHH+NE AQS A + QW+NY+LHTGHL G
Sbjct: 367 IECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQSEARFDNQQWINYFLHTGHLHIEGQ 426
Query: 468 DGTRRLRAARFIT 480
++ L+ FIT
Sbjct: 427 KMSKSLK--NFIT 437
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Query: 20 PKWSLPS--GYDTGIKIYNPITKTKVPFIIQNKNH-LKWYACGPTVYDSPHIGHAVCNVK 76
PKW +P+ +T +K+YN +T++KV FI Q+ N + WY+CGPTVYD+ H+GHA V
Sbjct: 22 PKWKVPTPQAKETVLKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVS 81
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
+DI RRI++ YF + +VTDIDDKII +A
Sbjct: 82 IDINRRIIQDYFGYDVQFVQNVTDIDDKIILRA 114
>gi|315049511|ref|XP_003174130.1| cysteinyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
gi|311342097|gb|EFR01300.1| cysteinyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
Length = 804
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 134/391 (34%), Positives = 194/391 (49%), Gaps = 74/391 (18%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V DI+RRIL YF I ++TD+DDKII T ++ L
Sbjct: 65 GHARNYVSADIVRRILRDYFKFDINYIMNITDVDDKII-----------TRGRQQHLYKQ 113
Query: 204 FKILHQKVVRKLAIDLKKAKVDSG----------PVLTKCDEFRDELLALGVQIKDQK-- 251
F H + ++L L AK G PV T EF+D + + D K
Sbjct: 114 FSAEHPSMDQEL---LDTAKAAYGAYITKNLPLVPVSTPTHEFKDTAENVYAAVLDGKPL 170
Query: 252 -CEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRT-------VVFEFLFNFR-- 301
+ + KV +S+ + + + G +++ T +++ +L +
Sbjct: 171 EGNSKAGEPEAKVKMYIKTLSVAAEALTVASTPDGNISVTTFYDKTQDILYPYLDTLKGS 230
Query: 302 ----------------YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY 345
YE + + + VL P TRV+EF+P I SF++ ++D K Y
Sbjct: 231 SIPGSDHSIFTRLTREYEDRFMKDVRDLNVLDPDEITRVTEFMPEIVSFVERIIDHKFGY 290
Query: 346 IGSDHSVYFDVDSFP----HYFKL--WGRNENITQ----------HAVKRSPFDFALWKS 389
+ D SVYFD++SF +Y +L W RN+ Q A K+S DFALWK+
Sbjct: 291 VTPDGSVYFDIESFEAAGNNYARLEPWNRNDANLQSEGEGSLSNKQAEKKSSADFALWKA 350
Query: 390 AKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFH 449
+K GEP + S WG GRPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS A+
Sbjct: 351 SKAGEPSWPSPWGNGRPGWHIECSAMASSRLGKQMDIHSGGIDLAFPHHDNEIAQSEAYW 410
Query: 450 NQS----QWVNYWLHTGHL--RGTDGTRRLR 474
+ + QWVNY++H GHL +G+ ++ L+
Sbjct: 411 SPTCSHVQWVNYFIHMGHLSIQGSKMSKSLK 441
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Query: 14 ATSCESPKWSLPSGYD------TGIKIYNPITKTKVPFIIQNKNHLK--WYACGPTVYDS 65
A E P W P+ + +KI+N +T++K PF+ + K WYACGPTVYD
Sbjct: 2 AAPREQPPWQQPAPHQGLQRELPPLKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDD 61
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
H+GHA V DI+RRIL YF I ++TD+DDKII +
Sbjct: 62 AHLGHARNYVSADIVRRILRDYFKFDINYIMNITDVDDKIITRG 105
>gi|71402719|ref|XP_804237.1| cysteinyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
gi|70867098|gb|EAN82386.1| cysteinyl-tRNA synthetase, putative [Trypanosoma cruzi]
Length = 785
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 137/407 (33%), Positives = 195/407 (47%), Gaps = 60/407 (14%)
Query: 102 DDKIINKANSLKEDYKTVAKRYFL--------PLIFKILHQKVVGSIPTRGHAVCNVKLD 153
D K + NSL E + A R P ++++ H GHA + D
Sbjct: 35 DAKGLRVLNSLTESVEPFAPREGRLVRWYACGPTVYELSHM---------GHARAYLTFD 85
Query: 154 IIRRILEHYFHIHSIVISSVTDIDDKIINKA------NSLKEDYKTVAKRYFLRLIFKIL 207
I+RRI+E YF + ++TDIDDKII +A +ED+ + R RL+
Sbjct: 86 ILRRIMEDYFGYQVVYQMNITDIDDKIIKRARISALLKRFREDF--LQGRDMARLVAFTA 143
Query: 208 HQKVVRKLAIDLKKAKV-----DSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGK 262
+ A++L + K D+ P K + E + + +K+ + + T + +
Sbjct: 144 EAETAAVEALELARIKFSEPLPDTTPSRIKAER---EEKQMELALKESQLQKTRE-RIAS 199
Query: 263 VFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFR---YELEYFESMEKFGVLPPT 319
+ F L I LL + V + +F YE +FE M + GV P
Sbjct: 200 ATASGNFDELFNAASGINGDLLDEREGQYVTDQSIFEDHARLYERLFFEDMRRLGVRDPD 259
Query: 320 RATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF-------PHYFKLWGRNENI 372
+RV+E++P + FIQ ++D AY G+ S++FD +F P + R EN
Sbjct: 260 VVSRVTEYVPQVVDFIQKIMDNGFAYRGTS-SIFFDTAAFLRAGHDYPKLKPVSERGEND 318
Query: 373 TQHAV---------------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
A KR+ DFALWK +KPGEP + S WG GRPGWHIECS MAS
Sbjct: 319 ATEAEMAEGEGALTVGVAGEKRNANDFALWKFSKPGEPRWPSPWGAGRPGWHIECSVMAS 378
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+H+GG DLKFPHH+NE AQS A H Q QW+NY+LH GHL
Sbjct: 379 DILGTNIDVHSGGWDLKFPHHDNECAQSEACHMQHQWINYFLHCGHL 425
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 20 PKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P D G+++ N +T++ PF + ++WYACGPTVY+ H+GHA + D
Sbjct: 26 PPWYPPVQNDAKGLRVLNSLTESVEPFAPREGRLVRWYACGPTVYELSHMGHARAYLTFD 85
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
I+RRI+E YF + ++TDIDDKII +A
Sbjct: 86 ILRRIMEDYFGYQVVYQMNITDIDDKIIKRA 116
>gi|255949146|ref|XP_002565340.1| Pc22g14160 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592357|emb|CAP98704.1| Pc22g14160 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 800
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 191/389 (49%), Gaps = 65/389 (16%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKAN-------------SLKED 190
GHA V DIIRRI+ YF + ++TD+DDKII +A ++ +
Sbjct: 62 GHARNYVSTDIIRRIMRDYFKFDVNFVMNITDVDDKIILRARQQHLFNEFITANPTITSE 121
Query: 191 YKTVAKRYFLRLIFKIL-----------HQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDE 239
K F+ + K L +Q V K A + +G L ++ D+
Sbjct: 122 VLDTVKSAFVAYLKKNLPLLDPETPPARYQNEVEKT-----YATILNGGALPGNEKAGDD 176
Query: 240 LLALGVQIKDQKCEAT---------WQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLR 290
+ + IK A D +F++ F S LIL + L ++
Sbjct: 177 EAKVKMHIKTAASAAKVFAQAETPHGSSADPALFAES-FYSNAQDLILPYLDALKGASVD 235
Query: 291 T---VVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIG 347
+F L RYE + + M VL PT TRV+E+ I +F+ ++ Y
Sbjct: 236 ADDHSIFTKLTK-RYEERFTKDMRDLNVLDPTELTRVTEYGDEIAAFVDRIVKNNFGYAT 294
Query: 348 SDHSVYFDVDSFPH----YFKL--WGRNEN----------ITQHAVKRSPFDFALWKSAK 391
D SVYFD+++F Y +L W R++N ++ KR DFALWKS+K
Sbjct: 295 KDGSVYFDINAFEAAGHPYARLEPWSRSDNKLAAEGEGSLASKTTEKRGASDFALWKSSK 354
Query: 392 PGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF--- 448
PGEP + SAWGKGRPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS A+
Sbjct: 355 PGEPSWSSAWGKGRPGWHIECSAMASARLGNQMDIHSGGIDLAFPHHDNELAQSEAYWHG 414
Query: 449 -HNQSQWVNYWLHTGHL--RGTDGTRRLR 474
H QWVNY+LH GHL +G+ ++ L+
Sbjct: 415 DHKHEQWVNYFLHMGHLSIQGSKMSKSLK 443
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 6/101 (5%)
Query: 15 TSCESPKW----SLPSGYDTGIKIYNPITKTKVPFIIQNKNHLK--WYACGPTVYDSPHI 68
+S + P W S P +K++N +TK+K PF+ + K WYACGPTVYD H+
Sbjct: 2 SSRQQPPWRQPPSSPDAQLPPLKVWNSLTKSKTPFVPIDSAGKKVVWYACGPTVYDDAHL 61
Query: 69 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
GHA V DIIRRI+ YF + ++TD+DDKII +A
Sbjct: 62 GHARNYVSTDIIRRIMRDYFKFDVNFVMNITDVDDKIILRA 102
>gi|392297105|gb|EIW08206.1| hypothetical protein CENPK1137D_2793 [Saccharomyces cerevisiae
CEN.PK113-7D]
Length = 754
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 134/377 (35%), Positives = 199/377 (52%), Gaps = 53/377 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY-KTVAKRYFL 200
GHA V +DI RRI++ YF + +VTDIDDKII +A N L +++ K ++
Sbjct: 61 GHARNYVSIDINRRIIQDYFGYDVQFVQNVTDIDDKIILRARQNYLFDNFVKENDTKFNA 120
Query: 201 RLIFKI---LHQKVVRKLAIDLKKAK-----------VDSGPVLTKCDEFRDELLALGVQ 246
++ K+ L Q + + I + K D+ + + +F + A+
Sbjct: 121 TVVDKVKTALFQYINKNFTIQGSEIKTIEEFETWLSNADTETLKLENPKFPMHVTAVQNA 180
Query: 247 IKD-QKCEATWQFKDGKVFSDRVF-ISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYEL 304
I+ K ++ D +V ++V +++PL + ++ P R + +E
Sbjct: 181 IESITKGDSM----DAEVAFEKVKDVTVPLLDKELGSTISNPEIFRQLPA------YWEQ 230
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV---DSFPH 361
++ + M VLPPT TRVSE++P I F+Q ++D AY SD SVYFD D P+
Sbjct: 231 KFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNGYAYATSDGSVYFDTLKFDKSPN 290
Query: 362 Y----FKLWGRNE------------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGR 405
+ + W + + N + K+S DFALWK++K GEP +ES WGKGR
Sbjct: 291 HDYAKCQPWNKGQLDLINDGEGSLSNFADNG-KKSNNDFALWKASKAGEPEWESPWGKGR 349
Query: 406 PGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL- 464
PGWHIECS MAS G +D+H+GGIDL FPHH+NE AQS A + QW+NY+LHTGHL
Sbjct: 350 PGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQSEARFDNQQWINYFLHTGHLH 409
Query: 465 -RGTDGTRRLRAARFIT 480
G ++ L+ FIT
Sbjct: 410 IEGQKMSKSLK--NFIT 424
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Query: 20 PKWSLPS--GYDTGIKIYNPITKTKVPFIIQNKNH-LKWYACGPTVYDSPHIGHAVCNVK 76
PKW +P+ +T +K+YN +T++KV FI Q+ N + WY+CGPTVYD+ H+GHA V
Sbjct: 9 PKWKVPTPQAKETVLKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVS 68
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
+DI RRI++ YF + +VTDIDDKII +A
Sbjct: 69 IDINRRIIQDYFGYDVQFVQNVTDIDDKIILRA 101
>gi|348530284|ref|XP_003452641.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like [Oreochromis
niloticus]
Length = 821
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 133/354 (37%), Positives = 175/354 (49%), Gaps = 52/354 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RRIL YF I ++TDIDDKII +A N L + YK +
Sbjct: 141 GHARSYISFDILRRILRDYFKYDVIYCMNITDIDDKIIKRARQNYLLDQYKEKRPQ---- 196
Query: 202 LIFKILHQKVVRKLAIDLKKAKV---DSGPVLTKCDEFRDELLALGVQIKDQKCEATWQF 258
+IL + + + A D +L + D V Q +A +
Sbjct: 197 -AAQILQDVLSARTPFQTQLASTTDPDKKQMLERLDS--------AVTASLQPLQAAMES 247
Query: 259 KDGKVFSDRVFISLPLYLILIQVSLL--------GPLTLRTVVFEFLFNFRYELEYFESM 310
K +D V L L+ LL G +F L + +E EY + M
Sbjct: 248 K----AADEVMRPLAHVLLENSKDLLADWLDKQFGSHVTENSIFSLLPKY-WEEEYHKDM 302
Query: 311 EKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV---DSFPH--YFKL 365
E VLPP TRVSE++P I F++ ++ Y S+ SVYFD DS P Y KL
Sbjct: 303 EALNVLPPDVLTRVSEYVPEIVEFVRKIVSNGYGY-ESNGSVYFDTSKFDSSPQHSYAKL 361
Query: 366 W----GRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHI 410
G + + + + K+SP DFALWK++KPGEP ++S WGKGRPGWHI
Sbjct: 362 VPEAVGDQKALQEGEGDLSISAERLSEKKSPNDFALWKASKPGEPSWDSPWGKGRPGWHI 421
Query: 411 ECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
ECSAMA G +D+H GG DL+FPHH+NE AQS AF WV Y+LHTGHL
Sbjct: 422 ECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAFFENDYWVRYFLHTGHL 475
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 90/168 (53%), Gaps = 12/168 (7%)
Query: 20 PKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P WS P+G D +++YN +T+ K F+ Q N + WY CGPTVYD+ H+GHA + D
Sbjct: 91 PPWSPPAGTDVPQLRLYNSLTRAKELFVPQKGNKVTWYCCGPTVYDASHMGHARSYISFD 150
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLPLIFKILHQKV 136
I+RRIL YF I ++TDIDDKII +A N L + YK KR P +IL +
Sbjct: 151 ILRRILRDYFKYDVIYCMNITDIDDKIIKRARQNYLLDQYKE--KR---PQAAQILQDVL 205
Query: 137 VGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 184
P + D +++LE + S V +S+ + + +KA
Sbjct: 206 SARTPFQTQLASTTDPD-KKQMLE---RLDSAVTASLQPLQAAMESKA 249
>gi|425773777|gb|EKV12110.1| Cysteinyl-tRNA synthetase [Penicillium digitatum Pd1]
gi|425775989|gb|EKV14228.1| Cysteinyl-tRNA synthetase [Penicillium digitatum PHI26]
Length = 800
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 136/388 (35%), Positives = 193/388 (49%), Gaps = 63/388 (16%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA------NSLKEDYKTVA-- 195
GHA V DIIRRI+ YF + ++TD+DDKII +A N T+
Sbjct: 62 GHARNYVSTDIIRRIMRDYFKFDVNFVMNITDVDDKIILRARQQHLFNEFVAANPTITSA 121
Query: 196 -----KRYFLRLIFKIL-----------HQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDE 239
K F+ + K L +Q V K A + +G L ++ D+
Sbjct: 122 VLDTVKSAFVAYLKKNLPLLDSELPPSRYQNEVEKT-----YATILNGGALPGNEKAGDD 176
Query: 240 LLALGVQIKDQ----KCEATWQFKDGK-----VFSDRVFISLPLYLILIQVSLLGPLTLR 290
+ + IK K A + +DG +F++ + + ++ +L G L
Sbjct: 177 EAKVKMHIKTAASAAKVIAQAEARDGSSTEPALFAESFYSNAQDLILPYLDALKGALVDA 236
Query: 291 T--VVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGS 348
+F L RYE + + M VL PT TRV+E+ I +F+ ++ Y
Sbjct: 237 NDHGIFTKLTK-RYEDRFIKDMRDLNVLDPTELTRVTEYGDEIAAFVDRIVKNNFGYATK 295
Query: 349 DHSVYFDVDSFPH----YFKL--WGRNEN----------ITQHAVKRSPFDFALWKSAKP 392
D SVYFD+++F Y +L W R++N ++ KR DFALWKS+KP
Sbjct: 296 DGSVYFDINAFEAAGYPYARLEPWSRSDNKLAAEGEGSLASKTTEKRGASDFALWKSSKP 355
Query: 393 GEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF---- 448
GEP + S WGKGRPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS A+
Sbjct: 356 GEPAWSSTWGKGRPGWHIECSAMASARLGNQMDIHSGGIDLAFPHHDNELAQSEAYWHGE 415
Query: 449 HNQSQWVNYWLHTGHL--RGTDGTRRLR 474
H QWVNY+LH GHL +G+ ++ L+
Sbjct: 416 HKHDQWVNYFLHMGHLSIQGSKMSKSLK 443
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 6/101 (5%)
Query: 15 TSCESPKWSLPSGYDTG----IKIYNPITKTKVPFIIQNKNHLK--WYACGPTVYDSPHI 68
+S + P W P+ +K++N +TK+K PF+ + K WYACGPTVYD H+
Sbjct: 2 SSRQQPPWRQPASSPDAQLPPLKVWNSLTKSKTPFVPIDPAGKKVLWYACGPTVYDDAHL 61
Query: 69 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
GHA V DIIRRI+ YF + ++TD+DDKII +A
Sbjct: 62 GHARNYVSTDIIRRIMRDYFKFDVNFVMNITDVDDKIILRA 102
>gi|321478384|gb|EFX89341.1| hypothetical protein DAPPUDRAFT_303176 [Daphnia pulex]
Length = 730
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 135/379 (35%), Positives = 195/379 (51%), Gaps = 73/379 (19%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY---------- 191
GHA + DI+RR+L YF + ++TDIDDKII +A N L E Y
Sbjct: 50 GHARSYMSFDILRRVLRDYFGYDITYVMNITDIDDKIIKRARQNYLYEKYAAQMSELETL 109
Query: 192 KTVAKRYFLRLIFKIL-----HQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLA-LGV 245
+T K RL ++ +KV+++ + A +D K D+ E+ + L
Sbjct: 110 QTDVKESVDRLTKQMAGTTDPDKKVMQEKMLAKVTAAIDKFTETIKLDQGLSEVKSFLLA 169
Query: 246 QIKDQKCEATW-QFKDGKVFSDR-VFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYE 303
+ KD + W K G SD +F SLP + +E
Sbjct: 170 EAKD--VLSDWLDSKHGMDVSDNAIFASLPRH--------------------------WE 201
Query: 304 LEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP--- 360
E+++ M VLP TRVSE++P I +I +++ AY ++ SVYF+V F
Sbjct: 202 EEFYKDMAALNVLPADVITRVSEYVPEIVDYISRIIERGLAY-SANGSVYFNVSKFDSQK 260
Query: 361 --HYFKL----WGRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGK 403
Y KL +G ++ + + + K+SP DFALWK++K GEP ++S WGK
Sbjct: 261 NHKYAKLVPEAYGDSKALQEGEGDLSVSEDRLSEKKSPNDFALWKTSKSGEPSWDSPWGK 320
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGH 463
GRPGWHIECS MAS G +D+HTGG+DLKFPHH+NE AQS A+++ +WV Y+LHTGH
Sbjct: 321 GRPGWHIECSVMASAILGSSMDIHTGGVDLKFPHHDNELAQSEAYYDNDEWVRYFLHTGH 380
Query: 464 L--RGTDGTRRLRAARFIT 480
L +G ++ L+ FIT
Sbjct: 381 LTIQGCKMSKSLK--NFIT 397
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F QN ++ WY+CGPTVYD+ H+GHA + DI+RR+L YF
Sbjct: 13 LKIYNSLTRKKEVFTPQNGKNITWYSCGPTVYDASHMGHARSYMSFDILRRVLRDYFGYD 72
Query: 92 SIVISSVTDIDDKIINKA--NSLKEDY 116
+ ++TDIDDKII +A N L E Y
Sbjct: 73 ITYVMNITDIDDKIIKRARQNYLYEKY 99
>gi|151944300|gb|EDN62578.1| conserved protein [Saccharomyces cerevisiae YJM789]
Length = 767
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 135/373 (36%), Positives = 196/373 (52%), Gaps = 45/373 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY-KTVAKRYFL 200
GHA V +DI RRI++ YF + +VTDIDDKII +A N L +++ K ++
Sbjct: 74 GHARNYVSIDINRRIIQDYFGYDVQFVQNVTDIDDKIILRARQNYLFDNFVKENDTKFNA 133
Query: 201 RLIFKI---LHQKVVRKLAIDLKKAKV--DSGPVLTKCD----EFRDELLALGVQIKDQK 251
++ K+ L Q + + I + K + L+ D + + + V
Sbjct: 134 TVVDKVKTALFQYINKNFTIQGSEIKTIEEFETWLSNADIETLKLENPKFPMHVTAARNA 193
Query: 252 CEATWQFK--DGKVFSDRVF-ISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFE 308
E+ + D +V ++V +++PL + ++ P R + +E ++ +
Sbjct: 194 IESITKGDSMDAEVAFEKVKDVTVPLLDKELGSTISNPEIFRQLPA------YWEQKFND 247
Query: 309 SMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV---DSFPH--YF 363
M VLPPT TRVSE++P I F+Q ++D AY SD SVYFD D P+ Y
Sbjct: 248 DMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNGYAYATSDGSVYFDTLKFDKSPNHDYA 307
Query: 364 KL--WGRNE------------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWH 409
K W + + N + K+S DFALWK++K GEP +ES WGKGRPGWH
Sbjct: 308 KCQPWNKGQLDLINDGEGSLSNFADNG-KKSNNDFALWKASKAGEPEWESPWGKGRPGWH 366
Query: 410 IECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGT 467
IECS MAS G +D+H+GGIDL FPHH+NE AQS A + QW+NY+LHTGHL G
Sbjct: 367 IECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQSEARFDNQQWINYFLHTGHLHIEGQ 426
Query: 468 DGTRRLRAARFIT 480
++ L+ FIT
Sbjct: 427 KMSKSLK--NFIT 437
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Query: 20 PKWSLPS--GYDTGIKIYNPITKTKVPFIIQNKNH-LKWYACGPTVYDSPHIGHAVCNVK 76
PKW +P+ +T +K+YN +T++KV FI Q+ N + WY+CGPTVYD+ H+GHA V
Sbjct: 22 PKWKVPTPQAKETVLKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVS 81
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
+DI RRI++ YF + +VTDIDDKII +A
Sbjct: 82 IDINRRIIQDYFGYDVQFVQNVTDIDDKIILRA 114
>gi|349580702|dbj|GAA25861.1| K7_Ynl247wp [Saccharomyces cerevisiae Kyokai no. 7]
Length = 767
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 196/373 (52%), Gaps = 45/373 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY-KTVAKRYFL 200
GHA V +DI RRI++ YF + +VTDIDDKII +A N L +++ K ++
Sbjct: 74 GHARNYVSIDINRRIIQDYFGYDVQFVQNVTDIDDKIILRARQNYLFDNFVKENDTKFNA 133
Query: 201 RLIFKI---LHQKVVRKLAIDLKKAKV--DSGPVLTKCD----EFRDELLALGVQIKDQK 251
++ K+ L Q + + I + K + L+ D + + + V
Sbjct: 134 TVVDKVKTALFQYINKNFTIQGSEIKTIEEFETWLSNADIETLKLENPKFPMHVTAVQNA 193
Query: 252 CEATWQFK--DGKVFSDRVF-ISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFE 308
E+ + D +V ++V +++PL + ++ P R + +E ++ +
Sbjct: 194 IESITKGDSMDAEVAFEKVKDVTVPLLDKELGSTISNPEIFRQLPA------YWEQKFND 247
Query: 309 SMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV---DSFPHY--- 362
M VLPPT TRVSE++P I F+Q ++D AY SD SVYFD D P++
Sbjct: 248 DMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNGYAYATSDGSVYFDTLKFDKSPNHDYA 307
Query: 363 -FKLWGRNE------------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWH 409
+ W + + N + K+S DFALWK++K GEP +ES WGKGRPGWH
Sbjct: 308 KCQPWNKGQLDLINDGEGSLSNFADNG-KKSNNDFALWKASKAGEPEWESPWGKGRPGWH 366
Query: 410 IECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGT 467
IECS MAS G +D+H+GGIDL FPHH+NE AQS A + QW+NY+LHTGHL G
Sbjct: 367 IECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQSEARFDNQQWINYFLHTGHLHIEGQ 426
Query: 468 DGTRRLRAARFIT 480
++ L+ FIT
Sbjct: 427 KMSKSLK--NFIT 437
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Query: 20 PKWSLPS--GYDTGIKIYNPITKTKVPFIIQNKNH-LKWYACGPTVYDSPHIGHAVCNVK 76
PKW +P+ +T +K+YN +T++KV FI Q+ N + WY+CGPTVYD+ H+GHA V
Sbjct: 22 PKWKVPTPQAKETVLKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVS 81
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
+DI RRI++ YF + +VTDIDDKII +A
Sbjct: 82 IDINRRIIQDYFGYDVQFVQNVTDIDDKIILRA 114
>gi|323335869|gb|EGA77147.1| YNL247W-like protein [Saccharomyces cerevisiae Vin13]
Length = 767
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 134/377 (35%), Positives = 199/377 (52%), Gaps = 53/377 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY-KTVAKRYFL 200
GHA V +DI RRI++ YF + +VTDIDDKII +A N L +++ K ++
Sbjct: 74 GHARNYVSIDINRRIIQDYFGYDVQFVQNVTDIDDKIILRARQNYLFDNFVKENDTKFNA 133
Query: 201 RLIFKI---LHQKVVRKLAIDLKKAK-----------VDSGPVLTKCDEFRDELLALGVQ 246
++ K+ L Q + + I + K D+ + + +F + A+
Sbjct: 134 TVVDKVKTALFQYINKNFTIQGSEIKTIEEFETWLSNADTETLKLENPKFPMHVTAVQNA 193
Query: 247 IKD-QKCEATWQFKDGKVFSDRVF-ISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYEL 304
I+ K ++ D +V ++V +++PL + ++ P R + +E
Sbjct: 194 IESITKGDSM----DAEVAFEKVKDVTVPLLDKELGSTISNPEIFRQLPA------YWEQ 243
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV---DSFPH 361
++ + M VLPPT TRVSE++P I F+Q ++D AY SD SVYFD D P+
Sbjct: 244 KFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNGYAYATSDGSVYFDTLKFDKSPN 303
Query: 362 Y----FKLWGRNE------------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGR 405
+ + W + + N + K+S DFALWK++K GEP +ES WGKGR
Sbjct: 304 HDYAKCQPWNKGQLDLINDGEGSLSNFADNG-KKSNNDFALWKASKAGEPEWESPWGKGR 362
Query: 406 PGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL- 464
PGWHIECS MAS G +D+H+GGIDL FPHH+NE AQS A + QW+NY+LHTGHL
Sbjct: 363 PGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQSEARFDNQQWINYFLHTGHLH 422
Query: 465 -RGTDGTRRLRAARFIT 480
G ++ L+ FIT
Sbjct: 423 IEGQKMSKSLK--NFIT 437
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Query: 20 PKWSLPS--GYDTGIKIYNPITKTKVPFIIQNKNH-LKWYACGPTVYDSPHIGHAVCNVK 76
PKW +P+ +T +K+YN +T++KV FI Q+ N + WY+CGPTVYD+ H+GHA V
Sbjct: 22 PKWKVPTPQAKETVLKLYNSLTRSKVEFIPQSGNRXVTWYSCGPTVYDASHMGHARNYVS 81
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
+DI RRI++ YF + +VTDIDDKII +A
Sbjct: 82 IDINRRIIQDYFGYDVQFVQNVTDIDDKIILRA 114
>gi|134081832|emb|CAK42087.1| unnamed protein product [Aspergillus niger]
Length = 729
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 187/385 (48%), Gaps = 33/385 (8%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPT------RGHAVCNVKLDIIRRILEHYFHIHSIVIS 171
T +K F+PL K K PT GHA V DI+RRIL YF +
Sbjct: 30 TRSKTPFVPLDPKGRKVKWYACGPTVYDDAHLGHARNYVSTDILRRILRDYFKFDVEFVM 89
Query: 172 SVTDIDDKIINKANSLKEDYKTVAKRYFLRL-IFKILHQKVVRKLAIDLKKAKVDSGPVL 230
++TD+DDKII + K +A+ + + + + + +L D+ P
Sbjct: 90 NITDVDDKIILRGRQQHLFNKYIAEHPTVTPDVLETARKAYSAYIKKNLPLVDPDTEP-- 147
Query: 231 TKCDEFRDELLALGVQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLR 290
+ F E EA + S + F + + + T+
Sbjct: 148 ---ENFVAEAQKTVTATTSAIAEAAQKLAGIDAASSKAFYDAAQDVFCFYLDVTEGSTIP 204
Query: 291 TVVFEFLFNF--RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGS 348
E +YE + M VL P TRV+E+ I F++ ++ K Y+ S
Sbjct: 205 GDAHEIFTKLTKKYEDHFMRDMRDLNVLDPDAVTRVTEYGQQIADFVEKIVANKFGYVTS 264
Query: 349 DHSVYFDVDSFP----HYFKL--WGRNEN---------ITQHAVKRSPFDFALWKSAKPG 393
D SVYFD+ +F HY +L W RN +++ K+S DFALWK+++PG
Sbjct: 265 DGSVYFDIKAFEEAGNHYARLEPWNRNNQPLLRDGEGALSRATEKKSSDDFALWKASRPG 324
Query: 394 EPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF--HNQ 451
EP + S WG+GRPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS A+ ++
Sbjct: 325 EPSWSSKWGQGRPGWHIECSAMASSCLGSQIDIHSGGIDLAFPHHDNELAQSEAYWCEHK 384
Query: 452 SQWVNYWLHTGHL--RGTDGTRRLR 474
QWVNY+LH GHL +G+ ++ L+
Sbjct: 385 QQWVNYFLHMGHLSIQGSKMSKSLK 409
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKN--HLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
+K++N +T++K PF+ + +KWYACGPTVYD H+GHA V DI+RRIL YF
Sbjct: 23 LKVWNSLTRSKTPFVPLDPKGRKVKWYACGPTVYDDAHLGHARNYVSTDILRRILRDYFK 82
Query: 90 IHSIVISSVTDIDDKII 106
+ ++TD+DDKII
Sbjct: 83 FDVEFVMNITDVDDKII 99
>gi|6324082|ref|NP_014152.1| cysteine--tRNA ligase [Saccharomyces cerevisiae S288c]
gi|1730840|sp|P53852.1|SYC_YEAST RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|1255971|emb|CAA65497.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1302287|emb|CAA96154.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285814418|tpg|DAA10312.1| TPA: cysteine--tRNA ligase [Saccharomyces cerevisiae S288c]
Length = 767
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 199/377 (52%), Gaps = 53/377 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY-KTVAKRYFL 200
GHA V +DI RRI++ YF + +VTDIDDKII +A N L +++ K ++
Sbjct: 74 GHARNYVSIDINRRIIQDYFGYDVQFVQNVTDIDDKIILRARQNYLFDNFVKENDTKFNA 133
Query: 201 RLIFKI---LHQKVVRKLAIDLKKAK-----------VDSGPVLTKCDEFRDELLALGVQ 246
++ K+ L Q + + I + K D+ + + +F + A+
Sbjct: 134 TVVDKVKTALFQYINKNFTIQGSEIKTIEEFETWLSNADTETLKLENPKFPMHVTAVQNA 193
Query: 247 IKD-QKCEATWQFKDGKVFSDRVF-ISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYEL 304
I+ K ++ D +V ++V +++PL + ++ P R + +E
Sbjct: 194 IESITKGDSM----DAEVAFEKVKDVTVPLLDKELGSTISNPEIFRQLPA------YWEQ 243
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV---DSFPH 361
++ + M VLPPT TRVSE++P I F+Q ++D AY SD SVYFD D P+
Sbjct: 244 KFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNGYAYATSDGSVYFDTLKFDKSPN 303
Query: 362 --YFKL--WGRNE------------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGR 405
Y K W + + N + K+S DFALWK++K GEP +ES WGKGR
Sbjct: 304 HDYAKCQPWNKGQLDLINDGEGSLSNFADNG-KKSNNDFALWKASKAGEPEWESPWGKGR 362
Query: 406 PGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL- 464
PGWHIECS MAS G +D+H+GGIDL FPHH+NE AQS A + QW+NY+LHTGHL
Sbjct: 363 PGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQSEARFDNQQWINYFLHTGHLH 422
Query: 465 -RGTDGTRRLRAARFIT 480
G ++ L+ FIT
Sbjct: 423 IEGQKMSKSLK--NFIT 437
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Query: 20 PKWSLPS--GYDTGIKIYNPITKTKVPFIIQNKNH-LKWYACGPTVYDSPHIGHAVCNVK 76
PKW +P+ +T +K+YN +T++KV FI Q+ N + WY+CGPTVYD+ H+GHA V
Sbjct: 22 PKWKVPTPQAKETVLKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVS 81
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
+DI RRI++ YF + +VTDIDDKII +A
Sbjct: 82 IDINRRIIQDYFGYDVQFVQNVTDIDDKIILRA 114
>gi|407844543|gb|EKG02008.1| cysteinyl-tRNA synthetase, putative [Trypanosoma cruzi]
Length = 785
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 136/407 (33%), Positives = 195/407 (47%), Gaps = 60/407 (14%)
Query: 102 DDKIINKANSLKEDYKTVAKRYFL--------PLIFKILHQKVVGSIPTRGHAVCNVKLD 153
D K + NSL E + A R P ++++ H GHA + D
Sbjct: 35 DAKGLRVLNSLTESVEPFAPREGRLVRWYACGPTVYELSHM---------GHARAYLTFD 85
Query: 154 IIRRILEHYFHIHSIVISSVTDIDDKIINKA------NSLKEDYKTVAKRYFLRLIFKIL 207
I+RRI+E YF + ++TDIDDKII +A +ED+ + R RL+
Sbjct: 86 ILRRIMEDYFGYQVVYQMNITDIDDKIIKRARISALLKRFREDF--LQGRDMARLVAFTA 143
Query: 208 HQKVVRKLAIDLKKAKV-----DSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGK 262
+ A++L + K D+ P K + E + + +K+ + + T + +
Sbjct: 144 EAETAAVEALELARIKFSEPLPDTTPSRIKAER---EEKQMELALKESQLQKTRE-RIAS 199
Query: 263 VFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFR---YELEYFESMEKFGVLPPT 319
+ F L I LL + V + +F YE +FE M + G+ P
Sbjct: 200 ATASGNFDELFNAASGINGDLLDEREGQYVTDQSIFEDHARLYERLFFEDMRRLGIRDPD 259
Query: 320 RATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF-------PHYFKLWGRNENI 372
+RV+E++P + FIQ ++D AY G+ S++FD +F P + R EN
Sbjct: 260 VVSRVTEYVPQVVDFIQKIMDNGFAYRGTS-SIFFDTTAFLRAGHDYPKLKPVSERGEND 318
Query: 373 TQHAV---------------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
A KR+ DFALWK +KPGEP + S WG GRPGWHIECS MAS
Sbjct: 319 ATEAEMAEGEGALTVGVAGEKRNANDFALWKFSKPGEPRWPSPWGAGRPGWHIECSVMAS 378
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+H+GG DLKFPHH+NE AQS A H Q QW+NY+LH GHL
Sbjct: 379 DILGTNIDVHSGGWDLKFPHHDNECAQSEACHMQHQWINYFLHCGHL 425
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 20 PKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P D G+++ N +T++ PF + ++WYACGPTVY+ H+GHA + D
Sbjct: 26 PPWYPPVQNDAKGLRVLNSLTESVEPFAPREGRLVRWYACGPTVYELSHMGHARAYLTFD 85
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
I+RRI+E YF + ++TDIDDKII +A
Sbjct: 86 ILRRIMEDYFGYQVVYQMNITDIDDKIIKRA 116
>gi|365758747|gb|EHN00574.1| YNL247W-like protein [Saccharomyces cerevisiae x Saccharomyces
kudriavzevii VIN7]
Length = 767
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 134/370 (36%), Positives = 194/370 (52%), Gaps = 39/370 (10%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY-KTVAKRYFL 200
GHA V +DI RRI++ YF + + +VTDIDDKII +A N L +++ K +
Sbjct: 74 GHARNYVSIDINRRIIQDYFGYNVQFVQNVTDIDDKIILRARQNYLFDNFVKENDTKLNT 133
Query: 201 RLIFKI---LHQKVVRKLAIDLKKAKV--DSGPVLTKCD----EFRDELLALGVQIKDQK 251
++I K+ L Q + + I+ + K + L+K D + + + V
Sbjct: 134 KVIDKVETALFQYINKSFTIEGNEIKSIGEFESWLSKADTEALKLENPKFPMHVTAVQNA 193
Query: 252 CEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESME 311
EA K + + F + + + LG +F L + +E ++ + M
Sbjct: 194 IEAI--TKANTMHPEVAFEKVKDVTVPLLDKELGSTINDPDIFRQLPAY-WEQKFNDDML 250
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV---DSFPHY----FK 364
VLPPT TRVSE++P I F+Q ++ AY SD SVYFD D P++ +
Sbjct: 251 SLNVLPPTVTTRVSEYVPEIIKFVQRIIGNGYAYATSDGSVYFDTLKFDRSPNHDYAKCQ 310
Query: 365 LWGRNE------------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
W + + N T + K+S DFALWK++K GEP +ES WGKGRPGWHIEC
Sbjct: 311 PWNKGQLDLINDAEGSLSNFTDNG-KKSNNDFALWKASKAGEPEWESPWGKGRPGWHIEC 369
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGT 470
S MAS G +D+H+GG+DL FPHH+NE AQS A + QW+NY+LHTGHL G +
Sbjct: 370 SVMASDILGSNIDIHSGGVDLAFPHHDNELAQSEACFDNKQWINYFLHTGHLHIEGQKMS 429
Query: 471 RRLRAARFIT 480
+ L+ FIT
Sbjct: 430 KSLK--NFIT 437
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Query: 20 PKWSLPS--GYDTGIKIYNPITKTKVPFIIQNKNH-LKWYACGPTVYDSPHIGHAVCNVK 76
PKW++P+ +K+YN +T++KV FI Q+ N + WY+CGPTVYD+ H+GHA V
Sbjct: 22 PKWNVPTPQAEKAVLKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVS 81
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
+DI RRI++ YF + + +VTDIDDKII +A
Sbjct: 82 IDINRRIIQDYFGYNVQFVQNVTDIDDKIILRA 114
>gi|407405510|gb|EKF30461.1| cysteinyl-tRNA synthetase, putative [Trypanosoma cruzi marinkellei]
Length = 785
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 197/405 (48%), Gaps = 56/405 (13%)
Query: 102 DDKIINKANSLKEDYKTVAKRYFL--------PLIFKILHQKVVGSIPTRGHAVCNVKLD 153
D K + NSL E + A R P ++++ H GHA + D
Sbjct: 35 DGKGLRVLNSLTESVEPFAPREGRLVRWYACGPTVYELSHM---------GHARAYLTFD 85
Query: 154 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTV--AKRYFLRLIFKILHQ 209
I+RRI+E YF + ++TDIDDKII +A ++L + ++ V R RL+
Sbjct: 86 ILRRIMEDYFGYQVVYQMNITDIDDKIIKRARISALLKRFREVFLQGRDMARLVAFTAEA 145
Query: 210 KVVRKLAIDLKKAKV-----DSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGKVF 264
+ A++L + K D+ P K + E + + +K+ + + T + +
Sbjct: 146 ETAAVEALELARIKFSEPLPDTTPSRIKAER---EEKRMELALKESQLQKTRE-RIASAI 201
Query: 265 SDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFR---YELEYFESMEKFGVLPPTRA 321
+ F L I LL + V + +F YE +FE M GV P
Sbjct: 202 ASGDFDELFSAASGINGDLLDEREGQYVTDQSIFEDHARLYERLFFEDMRSLGVRDPDVV 261
Query: 322 TRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF-------PHYFKLWGRNENITQ 374
+RV+E++P + FIQ ++D AY G+ S++FD +F P + R EN
Sbjct: 262 SRVTEYVPQVVDFIQKIMDNGFAYRGTS-SIFFDTTAFLRAGHDYPKLKPVSERGENDAT 320
Query: 375 HAV---------------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHF 419
A KR+ DFALWK +KPGEP + S WG+GRPGWHIECS MAS
Sbjct: 321 EAEMAEGEGALTVGVAGEKRNANDFALWKFSKPGEPRWPSPWGEGRPGWHIECSVMASDI 380
Query: 420 FGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+H+GG DLKFPHH+NE AQS A H Q QW+NY+LH GHL
Sbjct: 381 LGTNIDVHSGGWDLKFPHHDNECAQSEACHMQHQWINYFLHCGHL 425
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P +D G+++ N +T++ PF + ++WYACGPTVY+ H+GHA + D
Sbjct: 26 PPWYPPVQHDGKGLRVLNSLTESVEPFAPREGRLVRWYACGPTVYELSHMGHARAYLTFD 85
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
I+RRI+E YF + ++TDIDDKII +A
Sbjct: 86 ILRRIMEDYFGYQVVYQMNITDIDDKIIKRA 116
>gi|340915058|gb|EGS18399.1| cysteinyl-tRNA synthetase-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 907
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 171/365 (46%), Gaps = 53/365 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRIL ++F + + TDIDDKII KA + E K
Sbjct: 147 GHARNYVSTDIIRRILMYHFGYQVKFVMNYTDIDDKIIIKARRKRLLELEKEKPYTPEQV 206
Query: 200 LRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALG--------------V 245
L+FK L + +D + + D +LA G V
Sbjct: 207 RELVFKAFQAYAKSNLPLLAGAEPLDENNYIERRDAAYGRVLAGGTLSGEGKPSDAEAKV 266
Query: 246 QIKDQKCEATWQ-FKDGKVFSDRVFISLP----LYLILIQVSLLGPLTLRTVVFEFLFNF 300
++ +A Q +DG F + LP LY S T T E FN
Sbjct: 267 KMHISAMDAAAQALRDGTGFDGAEEVLLPYLDSLYKDTFDTSDQSIFTNLTQAMEKAFN- 325
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+ M VLPP TRV+E++P I +F+Q ++D AY ++ SVYFD+ +F
Sbjct: 326 -------DDMTALNVLPPDAVTRVTEYVPQIINFVQRIIDKGFAY-EANGSVYFDIAAFE 377
Query: 361 HYFKLWGR------NENITQHAV----------KRSPFDFALWKSAKPGEPWYESAWGKG 404
+ R N+ Q K+ DFALWK +KPGEPW+ S WG G
Sbjct: 378 KAGNTYARLRPESKNDKALQEEGEGSLSKGLEGKKRSGDFALWKKSKPGEPWWPSPWGPG 437
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF-----HNQSQWVNYWL 459
RPGWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A+ + WVNY+L
Sbjct: 438 RPGWHIECSVMASDKLGEQMDIHSGGIDLAFPHHDNELAQSEAYFYEAGKGEHTWVNYFL 497
Query: 460 HTGHL 464
H GHL
Sbjct: 498 HMGHL 502
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 30 TGIKIYNPITK-TKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
T I ++N + VPF+ + + + WYACGPT YD H+GHA V DIIRRIL ++F
Sbjct: 107 TPITVHNSLKPGAPVPFVPREEGKVSWYACGPTTYDLSHLGHARNYVSTDIIRRILMYHF 166
Query: 89 HIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYFLPLIFKILHQKVVGSIP 141
+ + TDIDDKII KA + E K L+FK ++P
Sbjct: 167 GYQVKFVMNYTDIDDKIIIKARRKRLLELEKEKPYTPEQVRELVFKAFQAYAKSNLP 223
>gi|430812640|emb|CCJ29941.1| unnamed protein product [Pneumocystis jirovecii]
Length = 764
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 190/387 (49%), Gaps = 61/387 (15%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V DIIRRIL+ YF I + +VTDIDDKII +A YF
Sbjct: 94 GHARNYVTTDIIRRILQDYFKYDVIFVQNVTDIDDKIIIRARH----------NYFYNKY 143
Query: 204 FKILHQ---KVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFK- 259
K + + +V K+ I K + + P E +E IKD + FK
Sbjct: 144 AKTVTEITPEVYNKVLIAWKNFAITNFPSAPTSLEIFEEW---SNSIKDLET-----FKS 195
Query: 260 DGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFN---------------FR--- 301
DGK+ + ++ Y LI L P V + L FR
Sbjct: 196 DGKLQMNFTILTNS-YEALISYKTLSPAIFLEKVKDILVLELDKELKHTINDNTIFREIP 254
Query: 302 --YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF 359
+E +Y E M+ VL P+ RV+EFIP I FI+ ++ AY S+ FD +F
Sbjct: 255 AYWERKYNEDMKALDVLEPSVIVRVTEFIPKIIEFIKGIMKNGYAY-EFKGSILFDTSAF 313
Query: 360 PH-----YFKL--WGRNE---------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGK 403
Y K+ W +N ++TQ K+ P DFALWK++KPGEP ++S WG+
Sbjct: 314 EANSCHTYAKIEPWNKNNKKLIIEGEGSLTQSEGKKVPSDFALWKASKPGEPAWDSPWGR 373
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGH 463
GRPGWHIECSAMA+ G ++D+H+GGIDL FPHH+NE AQS F + QWVNY+ H GH
Sbjct: 374 GRPGWHIECSAMAAEILGSEIDIHSGGIDLAFPHHDNEIAQSEGFFDSDQWVNYFFHIGH 433
Query: 464 LRGTDGTRRLRAARFITNLSGSTIGYT 490
L +G + ++ + + + YT
Sbjct: 434 LH-IEGQKMSKSLKNFITIQDALKKYT 459
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 50/76 (65%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
++N +T+ K F+ N + WY CGPTVYD H+GHA V DIIRRIL+ YF I
Sbjct: 59 VWNSLTREKNEFVPLNGRKITWYCCGPTVYDWSHMGHARNYVTTDIIRRILQDYFKYDVI 118
Query: 94 VISSVTDIDDKIINKA 109
+ +VTDIDDKII +A
Sbjct: 119 FVQNVTDIDDKIIIRA 134
>gi|302309006|ref|NP_986187.2| AFR640Wp [Ashbya gossypii ATCC 10895]
gi|299790899|gb|AAS54011.2| AFR640Wp [Ashbya gossypii ATCC 10895]
gi|374109419|gb|AEY98325.1| FAFR640Wp [Ashbya gossypii FDAG1]
Length = 750
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/350 (37%), Positives = 177/350 (50%), Gaps = 41/350 (11%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS--LKEDYKTVAKRYFLR 201
GHA V +DI RR++E YF H + +VTDIDDKII +A L +Y A +
Sbjct: 74 GHARNYVSIDINRRLIEDYFGYHVEFVQNVTDIDDKIILRARQEHLYAEY-VAAHPSVDQ 132
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDG 261
L+ + VV+ L P LT + L + ++ EA +F
Sbjct: 133 LVLADATEAVVQYFRKHLN-------PDLTTISAYEQWYAKLDLA---REREANAKFAMH 182
Query: 262 KVFSDRVFISL-----PLYLILIQVSLLGPLTLRTV-------VFEFLFNFRYELEYFES 309
R +L P +L ++ L+ L R+ VF L +E +
Sbjct: 183 TAAVGRALDALENPTVPGFLTAVKDVLVPLLDGRSGASVRDPDVFRALAA-HWENSFNAD 241
Query: 310 MEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP---HYF--- 363
ME+ GV PP+ TRVSE++ I FI+ ++ AY SD SVYFD F H +
Sbjct: 242 MERLGVRPPSVTTRVSEYVDEIVKFIERIVANGYAYATSDGSVYFDTVQFEAGGHAYPKC 301
Query: 364 KLWGRN---------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
+ W R + K++P DFALWK++K GEP + S WG GRPGWHIECS
Sbjct: 302 QPWNRGVADLIADGEGALATGTEKQNPNDFALWKASKAGEPEWPSPWGLGRPGWHIECSV 361
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
MAS G +VD+H+GGIDL FPHH+NE AQ+ A N QWVNY+LHTGHL
Sbjct: 362 MASDVLGERVDIHSGGIDLAFPHHDNELAQAEACFNSQQWVNYFLHTGHL 411
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 11 LSYATSCESPKWSLP--SGYDTGIKIYNPITKTKVPFI-IQNKNHLKWYACGPTVYDSPH 67
+S + P W P + +K+YN +T+TK FI + ++ WY+CGPTVYD+ H
Sbjct: 13 MSGSVKVVQPPWQKPVRAAEQPVLKLYNSLTRTKDEFIPLSQGRNVTWYSCGPTVYDASH 72
Query: 68 IGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
+GHA V +DI RR++E YF H + +VTDIDDKII +A
Sbjct: 73 MGHARNYVSIDINRRLIEDYFGYHVEFVQNVTDIDDKIILRA 114
>gi|365763469|gb|EHN04997.1| YNL247W-like protein [Saccharomyces cerevisiae x Saccharomyces
kudriavzevii VIN7]
Length = 767
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 199/377 (52%), Gaps = 53/377 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY-KTVAKRYFL 200
GHA V +DI RRI++ YF + +VTDIDDKII +A N L +++ K ++
Sbjct: 74 GHARNYVSIDINRRIIQDYFGYDVQFVQNVTDIDDKIILRARQNYLFDNFVKENDTKFNG 133
Query: 201 RLIFKI---LHQKVVRKLAIDLKKAK-----------VDSGPVLTKCDEFRDELLALGVQ 246
++ K+ L Q + + I + K D+ + + +F + A+
Sbjct: 134 TVVDKVKTALFQYINKNFTIQGSEIKTIEEFETWLSNADTETLKLENPKFPMHVTAVQNA 193
Query: 247 IKD-QKCEATWQFKDGKVFSDRVF-ISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYEL 304
I+ K ++ D +V ++V +++PL + ++ P R + +E
Sbjct: 194 IESITKGDSM----DAEVAFEKVKDVTVPLLDKELGSTISNPEIFRQLPA------YWEQ 243
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV---DSFPH 361
++ + M VLPPT TRVSE++P I F+Q ++D AY SD SVYFD D P+
Sbjct: 244 KFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNGYAYATSDGSVYFDTLKFDKSPN 303
Query: 362 --YFKL--WGRNE------------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGR 405
Y K W + + N + K+S DFALWK++K GEP +ES WGKGR
Sbjct: 304 HDYAKCQPWNKGQLDLINDGEGSLSNFADNG-KKSNNDFALWKASKAGEPEWESPWGKGR 362
Query: 406 PGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL- 464
PGWHIECS MAS G +D+H+GGIDL FPHH+NE AQS A + QW+NY+LHTGHL
Sbjct: 363 PGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQSEARFDNQQWINYFLHTGHLH 422
Query: 465 -RGTDGTRRLRAARFIT 480
G ++ L+ FIT
Sbjct: 423 IEGQKMSKSLK--NFIT 437
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Query: 20 PKWSLPS--GYDTGIKIYNPITKTKVPFIIQNKNH-LKWYACGPTVYDSPHIGHAVCNVK 76
PKW +P+ +T +K+YN +T++KV FI Q+ N + WY+CGPTVYD+ H+GHA V
Sbjct: 22 PKWKVPTPQAKETVLKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVS 81
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
+DI RRI++ YF + +VTDIDDKII +A
Sbjct: 82 IDINRRIIQDYFGYDVQFVQNVTDIDDKIILRA 114
>gi|256272357|gb|EEU07340.1| YNL247W-like protein [Saccharomyces cerevisiae JAY291]
Length = 767
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 199/377 (52%), Gaps = 53/377 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY-KTVAKRYFL 200
GHA V +DI RRI++ YF + +VTDIDDKII +A N L +++ K ++
Sbjct: 74 GHARNYVSIDINRRIIQDYFGYDVQFVQNVTDIDDKIILRARQNYLFDNFVKENDTKFNG 133
Query: 201 RLIFKI---LHQKVVRKLAIDLKKAK-----------VDSGPVLTKCDEFRDELLALGVQ 246
++ K+ L Q + + I + K D+ + + +F + A+
Sbjct: 134 TVVDKVKTALFQYINKNFTIQGSEIKTIEEFETWLSNADTETLKLENPKFPMHVTAVQNA 193
Query: 247 IKD-QKCEATWQFKDGKVFSDRVF-ISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYEL 304
I+ K ++ D +V ++V +++PL + ++ P R + +E
Sbjct: 194 IESITKGDSM----DAEVAFEKVKDVTVPLLDKELGSTISNPEIFRQLPA------YWEQ 243
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV---DSFPH 361
++ + M VLPPT TRVSE++P I F+Q ++D AY SD SVYFD D P+
Sbjct: 244 KFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNGYAYATSDGSVYFDTLKFDKSPN 303
Query: 362 --YFKL--WGRNE------------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGR 405
Y K W + + N + K+S DFALWK++K GEP +ES WGKGR
Sbjct: 304 HDYAKCQPWNKGQLDLINDGEGSLSNFADNG-KKSNNDFALWKASKAGEPEWESPWGKGR 362
Query: 406 PGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL- 464
PGWHIECS MAS G +D+H+GGIDL FPHH+NE AQS A + QW+NY+LHTGHL
Sbjct: 363 PGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQSEARFDNQQWINYFLHTGHLH 422
Query: 465 -RGTDGTRRLRAARFIT 480
G ++ L+ FIT
Sbjct: 423 IEGQKMSKSLK--NFIT 437
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 65/93 (69%), Gaps = 3/93 (3%)
Query: 20 PKWSLPS--GYDTGIKIYNPITKTKVPFIIQNKNH-LKWYACGPTVYDSPHIGHAVCNVK 76
PKW +P+ +T +K+YN +T++KV FI Q+ N + WY+CGPTVYD+ H+GHA V
Sbjct: 22 PKWKVPTPQAKETVLKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVS 81
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
+DI RRI++ YF + +VTDIDDKII +A
Sbjct: 82 IDINRRIIQDYFGYDVQFVQNVTDIDDKIILRA 114
>gi|451999705|gb|EMD92167.1| hypothetical protein COCHEDRAFT_1134381 [Cochliobolus
heterostrophus C5]
Length = 839
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 183/369 (49%), Gaps = 51/369 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS------LKEDYKTVAKR 197
GHA V DI+RRIL HY+ + + ++TD+DDKII + K D TV +
Sbjct: 100 GHARNYVTNDILRRILAHYYGYNVKFVQNITDVDDKIILRGRQQHLLAKFKADNPTVTEE 159
Query: 198 Y----------FLRLIFKILHQKV---------VRKLAIDLKKAKVDS-GPVLTKCDEFR 237
+++ +L + V +K A ++ VD GP K + +
Sbjct: 160 VINTTIKAFDAYIKKNLPLLSEDVTIGSFNDESAQKYANVIQGKSVDGVGPAGDKEAKIK 219
Query: 238 DELLALGVQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFL 297
L + + +D +VF L YL + S + VF L
Sbjct: 220 MHLRTASTAVTSLLAPSKSTPEDIEVFYAGAEDVLLPYLDSLYGSSID--ASDHTVFTTL 277
Query: 298 FNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVD 357
+YE + E M VL P TRV+E+ I SF++ ++ AY SD SVYFD++
Sbjct: 278 TK-KYEARFNEDMRALNVLDPDVVTRVTEYGDQIVSFVEKIIKNGMAYSTSDGSVYFDIE 336
Query: 358 SFP-----HYFKL--WGRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYES 399
+F HY +L W R + Q + KR+ DFALWKS+KPGEP + S
Sbjct: 337 AFEKRDGNHYARLEPWNRGDTNLQADGEGALSSVKTSEKRNESDFALWKSSKPGEPAWPS 396
Query: 400 AWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQ----SQWV 455
WG GRPGWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A+ +Q +QWV
Sbjct: 397 PWGPGRPGWHIECSVMASAVLGEQMDIHSGGIDLCFPHHDNELAQSEAYWSQEGRPTQWV 456
Query: 456 NYWLHTGHL 464
NY+LH GHL
Sbjct: 457 NYFLHMGHL 465
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 9 LALSYATSCESPKWSLPSGYDTG-IKIYNPITKTKVPF--IIQNKNHLKWYACGPTVYDS 65
LA + P W P G +K++N +T++K F I +KWY+CGPTVYD
Sbjct: 37 LAAMATPARTQPPWKQPQGSSPAKLKVWNSLTRSKNDFVPIDPEGKEVKWYSCGPTVYDD 96
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII 106
H+GHA V DI+RRIL HY+ + + ++TD+DDKII
Sbjct: 97 AHLGHARNYVTNDILRRILAHYYGYNVKFVQNITDVDDKII 137
>gi|380483074|emb|CCF40842.1| cysteinyl-tRNA synthetase, partial [Colletotrichum higginsianum]
Length = 605
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/382 (35%), Positives = 195/382 (51%), Gaps = 42/382 (10%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRI+ HYF + ++TD+DDKII KA + E K A+
Sbjct: 42 GHARNYVSTDIIRRIMIHYFGADVKFVMNITDVDDKIIIKARRQRLLELEKQKKYAQDEL 101
Query: 200 LRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKC---EATW 256
+L + L + L+ + +D L + D ++LA G + K EA
Sbjct: 102 AKLALTAFRAYAEKSLPL-LQSSDLDENNYLERRDGAYGKVLAGGTLTGEGKPGDDEAKT 160
Query: 257 QF----KDGKVFS--DRVFISLPLYLILIQVSLLGPLTLRT---VVFEFLFNFRYELEYF 307
+ D VF+ D+ F ++L + L T+ T +F L E E+F
Sbjct: 161 KMHIANMDAAVFAIKDKKFYPGIDEILLPYLDSLYKETIDTSDQTIFTDLTQ-SMEREFF 219
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH----YF 363
+ M+ L P TRV+E++P I ++ ++D AY SD SVYFD+ +F Y
Sbjct: 220 DDMDALNCLRPDVITRVTEYVPQIADYVARIVDKGFAY-ESDGSVYFDITAFEKAGNTYA 278
Query: 364 KL--WGRNENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIE 411
+L RN+ Q KR+ DFALWK +K GEP+++S WG+GRPGWHIE
Sbjct: 279 RLRPGNRNDKSLQEDGEGALSKNLGEKRNEGDFALWKKSKKGEPYWDSRWGQGRPGWHIE 338
Query: 412 CSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFH-----NQSQWVNYWLHTGHL-- 464
CS MAS G Q+D+H+GG+DL FPHH+NE AQS A++ + WVN +LH GHL
Sbjct: 339 CSVMASDVLGAQMDIHSGGVDLAFPHHDNELAQSEAYYVDNTKGEHTWVNNFLHMGHLSI 398
Query: 465 RGTDGTRRLRAARFITNLSGST 486
G+ ++ L+ + I + +T
Sbjct: 399 SGSKMSKSLKNFQTIQDALATT 420
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 32 IKIYNPITKTK-VPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+K++N + + VPF N + WYACGPTVYD H+GHA V DIIRRI+ HYF
Sbjct: 4 LKLHNSLKPGQPVPFSPINPGKVSWYACGPTVYDKSHLGHARNYVSTDIIRRIMIHYFGA 63
Query: 91 HSIVISSVTDIDDKIINKA 109
+ ++TD+DDKII KA
Sbjct: 64 DVKFVMNITDVDDKIIIKA 82
>gi|406700829|gb|EKD03991.1| cysteine-tRNA ligase [Trichosporon asahii var. asahii CBS 8904]
Length = 771
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/380 (35%), Positives = 186/380 (48%), Gaps = 61/380 (16%)
Query: 140 IPTRGHAV-CN-VKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS---LKEDYKTV 194
+ T G V CN + DI+RRIL YF + ++TDIDDKII +A LKE +
Sbjct: 39 VATNGRQVDCNYLTQDIVRRILRDYFGYDVNFVMNITDIDDKIIMRAREGYLLKETKEKN 98
Query: 195 AKR-----YFLRLIFKILHQKVVRKLA--IDLKKA------------KVDSGPVLTKCDE 235
K R F K+V+ L +D K S P + +
Sbjct: 99 PKLTPELIADARKAFAAFLPKLVKNLPSPVDAPNGDDALEHFNAIAKKAASDPAFVEAGK 158
Query: 236 FRDELLALGV----QIKDQKCEATWQFKDGKVFSDRVFISL------PLYLILIQVSLLG 285
++E L + Q +D A Q + G S + P Y ++
Sbjct: 159 EKEEKFGLYITSLTQARDAILTAEKQLESGAAGSVDALVDGTASVLGPYYGETKGNTIAD 218
Query: 286 PLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY 345
P+ + + ++ +E YFE M++ +L P TRVSE++P I +F+ ++ AY
Sbjct: 219 PVGVSRDLAQY-----WEQRYFEDMDRLHILRPDVITRVSEYVPEIVAFVDQIIKNGFAY 273
Query: 346 IGSDHSVYFDV--------DSFPHYF-----------KLWGRNEN-ITQHAVKRSPFDFA 385
++ SV+FDV D F H + KL E +T KR P DFA
Sbjct: 274 -EAEGSVWFDVNKFEGSDGDGFRHQYAKLQPSSKGNWKLLDEGEGALTGTKGKRQPQDFA 332
Query: 386 LWKS-AKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQ 444
LWK+ +KPGEP + S WG+GRPGWHIECS MAS G +D+H+GGIDL FPHH+NE AQ
Sbjct: 333 LWKAKSKPGEPAWPSPWGEGRPGWHIECSVMASEILGKNIDIHSGGIDLMFPHHDNELAQ 392
Query: 445 SCAFHNQSQWVNYWLHTGHL 464
S A+H QW+NY+LHTGHL
Sbjct: 393 SEAYHGNKQWINYFLHTGHL 412
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 19/79 (24%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCN-VKLDIIRRILEHYFHI 90
+K+YN ITK K F+ N + CN + DI+RRIL YF
Sbjct: 25 LKVYNSITKNKDTFVATNGRQVD------------------CNYLTQDIVRRILRDYFGY 66
Query: 91 HSIVISSVTDIDDKIINKA 109
+ ++TDIDDKII +A
Sbjct: 67 DVNFVMNITDIDDKIIMRA 85
>gi|395332640|gb|EJF65018.1| cysteinyl-tRNA synthetase [Dichomitus squalens LYAD-421 SS1]
Length = 776
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/367 (35%), Positives = 192/367 (52%), Gaps = 50/367 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFL--R 201
GHA V DI+RRIL YF + ++TDIDDKII +A K +++ L
Sbjct: 57 GHARNYVTQDILRRILTDYFKYDVHFVMNITDIDDKIILRARHNHLISKLISETTSLTPE 116
Query: 202 LIFKI-------LHQKVVRKLAIDLK---KAKVDSGPVLTKCDEFRDELLALGVQIKDQK 251
LI ++ + KV + LA + ++ ++ P L + F+D+ L + KD+K
Sbjct: 117 LIGQVQAAWVSYVQTKVSKGLADSDRPTAGSEREAWPELVQ--RFQDKAWRLQLLHKDEK 174
Query: 252 CE---------------ATWQFKDGKVFSDRVFISLPLYLILIQVSL---LGPLTLRTVV 293
E A QF+ G+ ++ + + ++ ++L G +
Sbjct: 175 FEMHFNAANVTYNSLVQAEKQFQSGQTGAEVAHSLIDVSKDVLALALDKQSGSTVNDHAI 234
Query: 294 FEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVY 353
F L + +E E+F+ M + V P TRV+E++P I F++ ++ Y + SVY
Sbjct: 235 FRSLAAY-WETEFFKDMRRLRVRDPDTLTRVTEYVPEIVDFVEGIVKNGYGY-EVEGSVY 292
Query: 354 FDVDSFPH-----YFKL--WGR-NENITQHAV--------KRSPFDFALWKSAKPGEPWY 397
FD +F Y KL W + N + + +RSP DFALWK++KPGEP +
Sbjct: 293 FDTRAFDRSDNHSYAKLEPWSKGNSELLEEGEGALSVTTGRRSPADFALWKASKPGEPSW 352
Query: 398 ESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNY 457
S WG GRPGWHIECS MAS FG +D+H+GGIDL FPHH+NE AQS A+HN WVNY
Sbjct: 353 PSPWGSGRPGWHIECSVMASAIFGDNMDIHSGGIDLAFPHHDNEMAQSEAYHNCHAWVNY 412
Query: 458 WLHTGHL 464
+LHTGHL
Sbjct: 413 FLHTGHL 419
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Query: 16 SCESPKWSLPS--GYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
+ + P WSLP+ + +K+YN +T+TK F+ H+KWY CGPTVYD+ H+GHA
Sbjct: 2 AVQQPPWSLPTQRAPEPVLKVYNSLTRTKTEFVPNEGRHVKWYNCGPTVYDASHMGHARN 61
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
V DI+RRIL YF + ++TDIDDKII +A
Sbjct: 62 YVTQDILRRILTDYFKYDVHFVMNITDIDDKIILRA 97
>gi|344307924|ref|XP_003422628.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like [Loxodonta
africana]
Length = 873
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 173/343 (50%), Gaps = 30/343 (8%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RR+L+ YF ++TDIDDKII +A N L E Y+ K+
Sbjct: 149 GHARSYISFDILRRVLKDYFKYDVFYCMNITDIDDKIIKRARQNHLFEQYRE--KQPQAA 206
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDG 261
+ + +H L +K + P + E + L + D+ +A ++
Sbjct: 207 QLLEDIHAA----LQPFSEKVNETTDPDKRQMLERTQRAVELAAEPLDKAVQAELSAEEI 262
Query: 262 KVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRA 321
++ + + L S G +F L F +E E+ + M VLPP
Sbjct: 263 SGHAEVLLEAAKDLLSDWLDSRFGSEVTDNSIFSKLPQF-WEEEFHKDMAALNVLPPDVL 321
Query: 322 TRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKLWGR---NENIT 373
TRVSE++P I SF+Q ++D Y S+ SVYFD +F Y KL ++
Sbjct: 322 TRVSEYVPEIVSFVQGIVDNGYGY-ASNGSVYFDTMNFASSEKHSYAKLVPEAVGDQKAL 380
Query: 374 QHA------------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFG 421
Q KRSP DFALWK++KPGEP + S WGKGRPGWHIECSAMA G
Sbjct: 381 QEGEGDLSISAERLNEKRSPSDFALWKASKPGEPSWPSPWGKGRPGWHIECSAMAGTLLG 440
Query: 422 GQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
+D+H GG DL+FPHH+NE AQS A+ WV Y+LHTGHL
Sbjct: 441 ASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 483
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P+W P+G + +++YN +T+ K FI QN + WY CGPTVYD+ H+GHA + D
Sbjct: 99 PRWLPPTGTEPCKLRLYNSLTRNKDVFIPQNGKKVTWYCCGPTVYDASHMGHARSYISFD 158
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYK 117
I+RR+L+ YF ++TDIDDKII +A N L E Y+
Sbjct: 159 ILRRVLKDYFKYDVFYCMNITDIDDKIIKRARQNHLFEQYR 199
>gi|334332629|ref|XP_003341620.1| PREDICTED: LOW QUALITY PROTEIN: cysteinyl-tRNA synthetase,
cytoplasmic-like [Monodelphis domestica]
Length = 832
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 175/349 (50%), Gaps = 42/349 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RR+L YF ++TD+DDKII +A N L E Y+ R
Sbjct: 150 GHARSYISFDILRRVLRDYFQFDVFYCMNITDVDDKIIKRARQNYLFEQYRGERPRA--- 206
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIK-DQKCEATWQFKD 260
+++R + LK + + E + VQ+ + ++ +
Sbjct: 207 -------TQLLRDVETALKPFSLQLNATTDPDKKQMLERIRDAVQLAVEPLADSVQRNAS 259
Query: 261 GKVFSDRVFISL-----PLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGV 315
G+ S RV + L PL L S LG +F L +E E+ ME V
Sbjct: 260 GEEISARVEVLLEKARDPLAEWLD--SHLGSQVTDNSIFSELPKA-WEAEFHRDMEALNV 316
Query: 316 LPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKLW---- 366
LPP TRVSE++P I SF++ ++ Y+ S+ SVYFD F Y KL
Sbjct: 317 LPPDVLTRVSEYVPEIVSFVEKIVANGYGYV-SNGSVYFDTAKFDASEAHSYAKLVPEAV 375
Query: 367 GRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAM 415
G + + + + KRSP DFALWK++KPGEP +E WGKGRPGWHIECSAM
Sbjct: 376 GDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWECPWGKGRPGWHIECSAM 435
Query: 416 ASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
A G +D+H GG DL+FPHH+NE AQS A+ WV Y+LHTGHL
Sbjct: 436 AGTILGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 484
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P WS P+G + +++YN +T+++ F+ Q + WY CGPTVYD+ H+GHA + D
Sbjct: 100 PPWSPPAGTEPCKLRLYNSLTRSQDEFVPQQGRKVTWYCCGPTVYDAAHMGHARSYISFD 159
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYK 117
I+RR+L YF ++TD+DDKII +A N L E Y+
Sbjct: 160 ILRRVLRDYFQFDVFYCMNITDVDDKIIKRARQNYLFEQYR 200
>gi|225683481|gb|EEH21765.1| cysteinyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
Length = 792
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 193/366 (52%), Gaps = 40/366 (10%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKAN----SLKEDYKTVAKRYF 199
GHA V DI+RRI+ YF+ I ++TD+DDK+ K + SL V R
Sbjct: 65 GHARNYVSNDILRRIMRDYFNFDVQFIMNITDVDDKVRGKFSPCFWSLAHGLIYVPGRKK 124
Query: 200 LRLIFKILHQKVVRKLAIDLKK--AKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQ 257
L L+ L + + +++K A + +G L + D+ + + IK A
Sbjct: 125 LPLLEAGL---TPERYSGEVEKVYAAILNGGALDGSGKPGDDEAKIKMHIKTAASAANML 181
Query: 258 FK----DGKVFSDRVFISLPLYLILIQVSLLGPLTLR---TVVFEFLFNFRYELEYFESM 310
K + S+ + ++ L+ SL G ++R +F L YE + + +
Sbjct: 182 SKIATSKESILSETFYKNVQDVLLEHLDSLYGS-SIRGEDRSIFTKLTK-TYEDRFMKDI 239
Query: 311 EKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP----HYFKL- 365
VL P TRV+E++P I F++ ++ K AY+ SD SVYFD+ +F Y +L
Sbjct: 240 RDLNVLDPDAVTRVTEYMPEIVQFVERIVQHKFAYVTSDGSVYFDITAFEASGNSYARLE 299
Query: 366 -WGRNEN----------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
W RN+ I + KRSP DFALWK++K GEP + S WG GRPGWHIECSA
Sbjct: 300 PWNRNDTKLQAEGEGALINRTTEKRSPADFALWKASKAGEPSWPSPWGDGRPGWHIECSA 359
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF----HNQSQWVNYWLHTGHL--RGTD 468
MAS G Q+D+H+GGIDL FPHH+NE AQS A+ Q+ WVNY+LH GHL +G+
Sbjct: 360 MASAKLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHENSAQNHWVNYFLHMGHLSIQGSK 419
Query: 469 GTRRLR 474
++ L+
Sbjct: 420 MSKSLK 425
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 63/103 (61%), Gaps = 6/103 (5%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLK--WYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
+KIYN +T++KVPF+ + + K WYACGPTVYD H+GHA V DI+RRI+ YF+
Sbjct: 26 LKIYNSLTRSKVPFVPLDPSGRKVTWYACGPTVYDDAHLGHARNYVSNDILRRIMRDYFN 85
Query: 90 IHSIVISSVTDIDDKIINKAN----SLKEDYKTVAKRYFLPLI 128
I ++TD+DDK+ K + SL V R LPL+
Sbjct: 86 FDVQFIMNITDVDDKVRGKFSPCFWSLAHGLIYVPGRKKLPLL 128
>gi|350579829|ref|XP_003480693.1| PREDICTED: LOW QUALITY PROTEIN: cysteinyl-tRNA synthetase,
cytoplasmic-like [Sus scrofa]
Length = 831
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 177/346 (51%), Gaps = 36/346 (10%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA V DI+RR+L YF ++TD+DDKII +A N L E Y+ K+
Sbjct: 149 GHARSYVSFDILRRVLRDYFRFDVFYCMNITDVDDKIIRRARQNYLFERYRE--KQPSAA 206
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDG 261
+ + +H ++ A LK+ + P + E + + + ++ A+ G
Sbjct: 207 QLLEDVH-AALQPFAAKLKET---TDPDKKQMLERLERAVTRAAEPLEEAVRASLV---G 259
Query: 262 KVFSDRVFISLPLYLILIQV---SLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPP 318
+ RV + L L+ S G +F L F +E E+ + ME VLPP
Sbjct: 260 EELDGRVQVLLAEAKDLLSDWLDSTHGSEVTDNSIFSQLPKF-WEAEFHKDMEALNVLPP 318
Query: 319 TRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH-----YFKL-------- 365
TRVSE++P I F+Q ++D Y S+ SVYFD F + Y KL
Sbjct: 319 DVLTRVSEYVPEIVDFVQKIMDNGYGY-ASNGSVYFDTVKFANSEGHCYGKLVPEAVGDQ 377
Query: 366 ----WGRNE---NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
G + + + + KRSP DFALWK++KPGEP + WG+GRPGWHIECSAMA
Sbjct: 378 RALQEGEGDLSISAERLSEKRSPNDFALWKASKPGEPSWPCPWGRGRPGWHIECSAMAGT 437
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+H GG DL+FPHH+NE AQS A+ WV Y+LHTGHL
Sbjct: 438 LLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 483
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P+W+ P+G + +++YN +T++K F+ Q+ + WY CGPTVYD+ H+GHA V D
Sbjct: 99 PQWAPPAGSEPCQLRLYNSLTRSKDVFVPQDGKRVTWYCCGPTVYDASHMGHARSYVSFD 158
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYK 117
I+RR+L YF ++TD+DDKII +A N L E Y+
Sbjct: 159 ILRRVLRDYFRFDVFYCMNITDVDDKIIRRARQNYLFERYR 199
>gi|444731581|gb|ELW71934.1| Cysteinyl-tRNA synthetase, cytoplasmic [Tupaia chinensis]
Length = 992
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/375 (35%), Positives = 183/375 (48%), Gaps = 47/375 (12%)
Query: 116 YKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTD 175
Y ++ + L IL+ V GS + DI+RR+L+ YF ++TD
Sbjct: 291 YNSLTRNKVLSSQNTILNWVVTGSY---------ISFDILRRVLKDYFKFDVFYCMNITD 341
Query: 176 IDDKIINKA--NSLKEDYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKC 233
IDDKII +A N L E Y+ K ++++ + LK +
Sbjct: 342 IDDKIIKRARQNYLFEQYRER----------KPQAEQLLADVCAALKPFSIKLSETTDPD 391
Query: 234 DEFRDELLALGVQIKDQKCEATWQFK-DGKVFSDRVFISLPLYLILIQV---SLLGPLTL 289
+ E + V++ + E Q K G+ + RV + L L+ S G
Sbjct: 392 KKQMLERIQHAVKLATEPLEKAVQSKLPGEEVNSRVEVLLEEAKDLLSDWLDSTFGSEVT 451
Query: 290 RTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSD 349
+F L F +E E+ + ME VLPP TRVSE++P I +F+Q ++D Y S+
Sbjct: 452 DNSIFSKLPKF-WEAEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIMDNGYGY-ASN 509
Query: 350 HSVYFDVDSFP-----HYFKL----WGRNENITQH-----------AVKRSPFDFALWKS 389
SVYFD F Y KL G + + + + KRSP DFALWK+
Sbjct: 510 GSVYFDTVKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPSDFALWKA 569
Query: 390 AKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFH 449
+KPGEP + WGKGRPGWHIECSAMA G +D+H GG DL+FPHH+NE AQS A+
Sbjct: 570 SKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYF 629
Query: 450 NQSQWVNYWLHTGHL 464
WV Y+LHTGHL
Sbjct: 630 ENDCWVRYFLHTGHL 644
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 18/101 (17%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P+WS P+G +++YN +T+ KV + L W G + D
Sbjct: 275 PQWSPPAGTQPCKLRLYNSLTRNKV--LSSQNTILNWVVTGSYI-------------SFD 319
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYK 117
I+RR+L+ YF ++TDIDDKII +A N L E Y+
Sbjct: 320 ILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNYLFEQYR 360
>gi|380011473|ref|XP_003689827.1| PREDICTED: cysteine--tRNA ligase, mitochondrial-like [Apis florea]
Length = 489
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 109/167 (65%), Gaps = 1/167 (0%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E+ E M+ V+ P RV+++IP I F+++++D AY+ D SVYFD +
Sbjct: 105 YENEFIEDMKMLNVIKPHLYCRVTDYIPQIIQFVKSIVDKGNAYVSKDGSVYFDTCKYEM 164
Query: 362 YFKLWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFG 421
Y KL N H K+S DF LWK+AK EP ++S W GRPGWHIECS +AS FG
Sbjct: 165 YGKLSTPLLN-NSHPDKKSAMDFCLWKAAKENEPCWKSLWSFGRPGWHIECSTIASTVFG 223
Query: 422 GQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTD 468
VD+H+GGIDL FPHHENEEAQSC++H QWVNYW+H GHL D
Sbjct: 224 NSVDIHSGGIDLMFPHHENEEAQSCSYHEVEQWVNYWIHCGHLSLKD 270
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 71/96 (73%)
Query: 28 YDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHY 87
Y T I IYNPITK KVP I++NKN L WY CGPTVYDS HIGHA+ V DIIRRIL +
Sbjct: 10 YKTDIVIYNPITKCKVPLILKNKNILTWYVCGPTVYDSAHIGHAMTYVHSDIIRRILTDH 69
Query: 88 FHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
F+I+ ++ +TDIDDKII ++ LK++YK + + Y
Sbjct: 70 FNINIVMAMCLTDIDDKIIIRSKELKQNYKNLTRYY 105
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 11/83 (13%)
Query: 125 LPLIFK---ILHQKVVGSIPTR------GHAVCNVKLDIIRRILEHYFHIHSIVISSVTD 175
+PLI K IL V G PT GHA+ V DIIRRIL +F+I+ ++ +TD
Sbjct: 25 VPLILKNKNILTWYVCG--PTVYDSAHIGHAMTYVHSDIIRRILTDHFNINIVMAMCLTD 82
Query: 176 IDDKIINKANSLKEDYKTVAKRY 198
IDDKII ++ LK++YK + + Y
Sbjct: 83 IDDKIIIRSKELKQNYKNLTRYY 105
>gi|389583354|dbj|GAB66089.1| cysteine -tRNA ligase [Plasmodium cynomolgi strain B]
Length = 697
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 131/199 (65%), Gaps = 21/199 (10%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF- 359
++E E++E M+K VL PT TRVSE++ I +I+ ++D K AY+ + SVYFD+D F
Sbjct: 206 KWEYEFWEDMKKLNVLLPTAITRVSEYVDQIIHYIEKIIDNKYAYVSEEGSVYFDIDEFK 265
Query: 360 --PHYFK--------------LWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGK 403
P +F L G + K++ +DFALWKS+KP EP+++S WGK
Sbjct: 266 KNPKHFYARMEPLSVKDETKILEGEGDLGVISKKKKNSYDFALWKSSKPNEPYWDSPWGK 325
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGH 463
GRPGWHIECS MAS+ G +D+H+GG+DL+FPHH+NE AQS AF ++SQWVNY+LH+GH
Sbjct: 326 GRPGWHIECSTMASNILGNILDIHSGGVDLRFPHHDNELAQSEAFFDESQWVNYFLHSGH 385
Query: 464 L--RGTDGTRRLRAARFIT 480
L G ++ L+ FIT
Sbjct: 386 LHIEGLKMSKSLK--NFIT 402
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 76/119 (63%), Gaps = 3/119 (2%)
Query: 8 SLALSYATSCESPKWSLPSGYD---TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYD 64
+L S TS P+W +P TG+ + N +T++KV F+ Q KN +KWYACGPTVYD
Sbjct: 89 ALQCSMETSSSLPQWDMPPKEGKKITGLLVNNSLTRSKVEFVPQEKNLIKWYACGPTVYD 148
Query: 65 SPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ H+GHA V DIIRRIL +YF ++ ++TDIDDKII ++ K + +A+++
Sbjct: 149 AAHLGHARTYVSFDIIRRILVNYFKYDVFMVINITDIDDKIIKRSEEEKVTFTELARKW 207
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V DIIRRIL +YF ++ ++TDIDDKII ++ K + +A+++
Sbjct: 153 GHARTYVSFDIIRRILVNYFKYDVFMVINITDIDDKIIKRSEEEKVTFTELARKW----- 207
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGKV 263
+ D+KK V +T+ E+ D+++ +I D K + ++G V
Sbjct: 208 --------EYEFWEDMKKLNVLLPTAITRVSEYVDQIIHYIEKIIDNKY--AYVSEEGSV 257
Query: 264 FSD 266
+ D
Sbjct: 258 YFD 260
>gi|221055309|ref|XP_002258793.1| cysteine--trna ligase [Plasmodium knowlesi strain H]
gi|193808863|emb|CAQ39566.1| cysteine--trna ligase, putative [Plasmodium knowlesi strain H]
Length = 695
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 131/199 (65%), Gaps = 21/199 (10%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF- 359
++ELE++E M+K VL PT TRVSE++ I +I+ +++ K AY+ + SVYFD+D+F
Sbjct: 214 KWELEFWEDMKKLNVLLPTAITRVSEYVDQIIHYIEKIIENKYAYVSEEGSVYFDIDAFK 273
Query: 360 --PHYFK--------------LWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGK 403
P +F L G + K++ +DFALWKS+KP EP++ S WGK
Sbjct: 274 KNPKHFYARMEPLSVKDETKILEGEGDLGVISKKKKNSYDFALWKSSKPNEPYWNSPWGK 333
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGH 463
GRPGWHIECS MAS+ G +D+H+GG+DL+FPHH+NE AQS AF + SQWVNY+LH+GH
Sbjct: 334 GRPGWHIECSTMASNILGSVLDIHSGGVDLRFPHHDNELAQSEAFFDASQWVNYFLHSGH 393
Query: 464 L--RGTDGTRRLRAARFIT 480
L G ++ L+ FIT
Sbjct: 394 LHIEGLKMSKSLK--NFIT 410
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
Query: 2 SILSQSSLALSYATSCESPKWSLPSGYD---TGIKIYNPITKTKVPFIIQNKNHLKWYAC 58
++ +L + T+ PKW +P TG+ + N +T++KV F+ Q K+ ++WYAC
Sbjct: 91 NVAKAKTLQCNMETNSSLPKWDMPPKEGKKITGLLVNNSLTRSKVEFVPQEKDQIRWYAC 150
Query: 59 GPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKT 118
GPTVYD+ H+GHA V DIIRRIL +YF ++ ++TDIDDKII ++ K +
Sbjct: 151 GPTVYDAAHLGHARTYVSFDIIRRILVNYFKYDVFMVINITDIDDKIIKRSEEEKVSFTE 210
Query: 119 VAKRYFL 125
+A+++ L
Sbjct: 211 LARKWEL 217
>gi|330924798|ref|XP_003300783.1| hypothetical protein PTT_12131 [Pyrenophora teres f. teres 0-1]
gi|311324916|gb|EFQ91133.1| hypothetical protein PTT_12131 [Pyrenophora teres f. teres 0-1]
Length = 798
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/366 (36%), Positives = 182/366 (49%), Gaps = 46/366 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS------LKEDYKTVAKR 197
GHA V DI+RRIL HY+ + + ++TD+DDKII + K + TV +
Sbjct: 61 GHARNYVTNDILRRILAHYYGYNVKFVQNITDVDDKIILRGRQQHLLAKFKAENPTVTEE 120
Query: 198 YFLRLI--FKILHQKVVRKLAIDL-----------KKAKVDSGPVLTKCDEFRDELLALG 244
I F +K + L+ D+ K A V G + D+ D+ +
Sbjct: 121 VIDTTIKAFDAYVKKNLPLLSQDVNIGTFNNDSAEKYANVIQGKSIDGVDQPGDKEAKIK 180
Query: 245 VQIKDQKCEATWQFKDGKVFSDRV---FISLPLYLILIQVSLLGPLTLRT--VVFEFLFN 299
+ ++ T K + V + L+ SL G + VF L
Sbjct: 181 MHLRTASTAVTSLLAPSKSTPEDVDVFYAGAEDVLLPYLDSLYGSTIDASDHSVFTTLTK 240
Query: 300 FRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF 359
+YE + E M VL P TRV+E+ I SF+ ++ AY SD SVYFD+++F
Sbjct: 241 -KYEARFNEDMRNLNVLEPDVVTRVTEYGNEIVSFVDKIIKNGMAYSTSDGSVYFDIENF 299
Query: 360 P-----HYFKL--WGRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAW 401
HY +L W R + Q + KR+ DFALWKS+KPGEP ++S W
Sbjct: 300 EKKEGNHYARLEPWNRGDTNLQADGEGALSSVKTSEKRNDSDFALWKSSKPGEPAWDSPW 359
Query: 402 GKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQ---SQWVNYW 458
G GRPGWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A+ + +QWVNY+
Sbjct: 360 GPGRPGWHIECSVMASAVLGEQMDIHSGGIDLCFPHHDNELAQSEAYWQKDGGAQWVNYF 419
Query: 459 LHTGHL 464
LH GHL
Sbjct: 420 LHMGHL 425
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 20 PKWSLPSGYDTG-IKIYNPITKTKVPFI--IQNKNHLKWYACGPTVYDSPHIGHAVCNVK 76
P W P +K++N +T+TK FI +KWY+CGPTVYD H+GHA V
Sbjct: 9 PPWKEPKASSAAKLKVWNSLTRTKNDFIPIDPEGKEVKWYSCGPTVYDDAHLGHARNYVT 68
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKII 106
DI+RRIL HY+ + + ++TD+DDKII
Sbjct: 69 NDILRRILAHYYGYNVKFVQNITDVDDKII 98
>gi|350409375|ref|XP_003488713.1| PREDICTED: cysteinyl-tRNA synthetase, mitochondrial-like [Bombus
impatiens]
Length = 522
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 88/163 (53%), Positives = 107/163 (65%), Gaps = 1/163 (0%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E+ E M+ V P RV+++IP I F++ +LD AY D SVYFD +
Sbjct: 134 YENEFIEDMKMLNVARPHLYCRVTDYIPQIIQFVKRILDKGNAYTTKDGSVYFDTHKYGM 193
Query: 362 YFKLWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFG 421
Y KL + + H K+SP DF LWK+AK GEP++ES W GRPGWHIECS +AS FG
Sbjct: 194 YGKLSTPISD-SFHPDKKSPLDFCLWKTAKEGEPFWESPWAPGRPGWHIECSTIASTIFG 252
Query: 422 GQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
VD H+GGIDL FPHHENEEAQSC +H QWVNYW+H GHL
Sbjct: 253 NSVDFHSGGIDLMFPHHENEEAQSCCYHEVEQWVNYWVHYGHL 295
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 91/149 (61%), Gaps = 11/149 (7%)
Query: 18 ESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
+ +W P+GY T I+IYNPITK +VP I++NK L WY CGPTVYDS HIGHAV V
Sbjct: 29 KQAQWLKPTGYKTDIQIYNPITKCEVPLILKNKAVLTWYLCGPTVYDSAHIGHAVTYVYS 88
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVV 137
DIIRRIL +F+I+ ++ VTDIDDKII ++ LK++YK + K Y I + V
Sbjct: 89 DIIRRILSDHFNINVVMAMCVTDIDDKIIARSKDLKQNYKDLTKHYENEFIEDMKMLNVA 148
Query: 138 GSIPTRGHAVCNVK------LDIIRRILE 160
R H C V + ++RIL+
Sbjct: 149 -----RPHLYCRVTDYIPQIIQFVKRILD 172
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHAV V DIIRRIL +F+I+ ++ VTDIDDKII ++ LK++YK + K Y I
Sbjct: 80 GHAVTYVYSDIIRRILSDHFNINVVMAMCVTDIDDKIIARSKDLKQNYKDLTKHYENEFI 139
Query: 204 FKILHQKVVR 213
+ V R
Sbjct: 140 EDMKMLNVAR 149
>gi|393217153|gb|EJD02642.1| hypothetical protein FOMMEDRAFT_85321 [Fomitiporia mediterranea
MF3/22]
Length = 776
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 144/372 (38%), Positives = 192/372 (51%), Gaps = 59/372 (15%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA V D++RRIL YF + +VTDIDDKII ++ N L + +K+ A
Sbjct: 56 GHARNYVTQDVLRRILVDYFGYDVHFVMNVTDIDDKIIRRSRENHLLDKFKSNASALTTN 115
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQF--- 258
LI ++ V L L KA + T+ E EL GV I D+ +A W+
Sbjct: 116 LIAEVEDAWKVY-LRTQLAKALEE-----TELPEEGRELEWWGV-IWDKAQDAEWRQDRM 168
Query: 259 -KDGKV--------FSDRVFISLPLYLILIQVSLLGPLTL----RTVVFEFLFN------ 299
KD K S R + + Q S L L + V+ + L
Sbjct: 169 KKDDKFDMHLKALDTSKRALSASKALVTKGQTSSEDALRLIDESQDVLVKALDKKYGNEV 228
Query: 300 ---------FRY-ELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSD 349
RY E E+F+ M + V PP TRV+E++P I +F++ ++ AY S+
Sbjct: 229 TDPALSRSLARYWEGEFFKDMTRLRVRPPDTLTRVTEYLPEIIAFVEQVIKNGYAY-ESE 287
Query: 350 HSVYFDVDSFPH-----YFKLW----GRNENITQ-------HAV-KRSPFDFALWKSAKP 392
SVYFD +F Y KL G E + + AV +RS DFALWK++KP
Sbjct: 288 GSVYFDAGAFEQADGHAYPKLQPGSKGNRELLEEGEGVLAPKAVGQRSKSDFALWKNSKP 347
Query: 393 GEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS 452
GEP + S WG GRPGWHIECS MAS FG +D+H+GGIDL FPHH+NE AQS A+HN +
Sbjct: 348 GEPSWPSPWGAGRPGWHIECSVMASAIFGDNMDIHSGGIDLAFPHHDNEMAQSEAYHNCN 407
Query: 453 QWVNYWLHTGHL 464
QWVNY++HTGHL
Sbjct: 408 QWVNYFIHTGHL 419
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
Query: 22 WSLPSG--YDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDI 79
W+ P+G + +KIYN +TKTK F+ +N +KWY CGPTVYD+ H+GHA V D+
Sbjct: 7 WAPPAGPSDEPSLKIYNSLTKTKTDFVPRNGRLVKWYNCGPTVYDASHMGHARNYVTQDV 66
Query: 80 IRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLPLIFKI 131
+RRIL YF + +VTDIDDKII ++ N L + +K+ A LI ++
Sbjct: 67 LRRILVDYFGYDVHFVMNVTDIDDKIIRRSRENHLLDKFKSNASALTTNLIAEV 120
>gi|156096861|ref|XP_001614464.1| cysteine -tRNA ligase [Plasmodium vivax Sal-1]
gi|148803338|gb|EDL44737.1| cysteine -tRNA ligase, putative [Plasmodium vivax]
Length = 686
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 130/199 (65%), Gaps = 21/199 (10%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF- 359
++E E++E M+K VL PT TRVSE++ I +I+ ++D K AY+ + SVYFD+D F
Sbjct: 205 KWECEFWEDMKKLNVLLPTAITRVSEYVDQIIHYIEKIIDNKYAYVSEEGSVYFDIDEFK 264
Query: 360 --PHYFK--------------LWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGK 403
P +F L G + K++ +DFALWKS+KP EP+++S WGK
Sbjct: 265 KSPKHFYARMEPLSVKDETKILEGEGDLGVISKKKKNAYDFALWKSSKPNEPYWDSPWGK 324
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGH 463
GRPGWHIECS MAS+ G +D+H+GG+DL+FPHH+NE AQS AF + SQWVNY+LH+GH
Sbjct: 325 GRPGWHIECSTMASNILGSVLDIHSGGVDLRFPHHDNELAQSEAFFDASQWVNYFLHSGH 384
Query: 464 L--RGTDGTRRLRAARFIT 480
L G ++ L+ FIT
Sbjct: 385 LHIEGLKMSKSLK--NFIT 401
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 76/119 (63%), Gaps = 3/119 (2%)
Query: 8 SLALSYATSCESPKWSLPSGYD---TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYD 64
+L S TS PKW +P TG+ + N +T++KV F+ Q KN +KWYACGPTVYD
Sbjct: 88 ALQCSMETSSSLPKWDMPPKEGKKITGLLVNNSLTRSKVEFVPQEKNQIKWYACGPTVYD 147
Query: 65 SPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ H+GHA V DIIRRIL +YF ++ ++TDIDDKII ++ K + +A+++
Sbjct: 148 AAHLGHARTYVSFDIIRRILVNYFKYDVFMVINITDIDDKIIKRSEEEKVSFTELARKW 206
>gi|317155055|ref|XP_003190552.1| cysteinyl-tRNA synthetase [Aspergillus oryzae RIB40]
Length = 806
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 196/383 (51%), Gaps = 53/383 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKAN-------------SLKED 190
GHA V DIIRRI+ YF + ++TD+DDKII + ++ D
Sbjct: 65 GHARNYVSTDIIRRIMRDYFKFDVNFVMNITDVDDKIILRGRQQHLFTEFTSEHPTIAGD 124
Query: 191 YKTVAKRYFLRLIFKILH----QKVVRKLAIDLKK--AKVDSGPVLTKCDEFRDELLALG 244
VAK+ + I K L V + +++K A V +G L ++ D+
Sbjct: 125 VLDVAKKAYTAYIKKNLPLLSPDLPVSQYKDEVEKTYATVLNGGPLPGNEKAGDDEAKAK 184
Query: 245 VQIKDQK------CEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRT--VVFEF 296
+ IK EA + K F+++ + L+ SL G +F
Sbjct: 185 MHIKTVASAAKVIAEAEQSGERPKGFAEKFYTEAQDLLLPYLDSLKGTSINADDHGIFTK 244
Query: 297 LFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV 356
L RYE + + M VL P TRV+E+ I F++ ++ Y+ D SVYFD+
Sbjct: 245 LTK-RYEERFLKDMRDLNVLDPNEITRVTEYGAEIADFVEKIVKNNFGYVTDDGSVYFDI 303
Query: 357 DSFPH----YFKL--WGRNEN---------ITQHAV-KRSPFDFALWKSAKPGEPWYESA 400
++F Y +L W R+++ +T+ A KRS DFALWK++KPGEP + S+
Sbjct: 304 EAFEAAGHPYARLEPWNRSDSKLLAEGEGSLTKKATDKRSASDFALWKASKPGEPSWASS 363
Query: 401 WGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF----HNQS---Q 453
WG+GRPGWHIECSAMAS G Q+D+H+GG+DL FPHH+NE AQS A+ HN S Q
Sbjct: 364 WGRGRPGWHIECSAMASARLGKQLDIHSGGVDLAFPHHDNELAQSEAYWADSHNHSHDEQ 423
Query: 454 WVNYWLHTGHL--RGTDGTRRLR 474
WVNY+ H GHL +G+ ++ L+
Sbjct: 424 WVNYFFHMGHLSIQGSKMSKSLK 446
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLK--WYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
+K++N +T++K PFI +K K WYACGPTVYD H+GHA V DIIRRI+ YF
Sbjct: 26 LKVWNSLTRSKNPFIPIDKEGKKVSWYACGPTVYDDAHLGHARNYVSTDIIRRIMRDYFK 85
Query: 90 IHSIVISSVTDIDDKII 106
+ ++TD+DDKII
Sbjct: 86 FDVNFVMNITDVDDKII 102
>gi|70997892|ref|XP_753678.1| cysteinyl-tRNA synthetase [Aspergillus fumigatus Af293]
gi|66851314|gb|EAL91640.1| cysteinyl-tRNA synthetase [Aspergillus fumigatus Af293]
Length = 808
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 134/391 (34%), Positives = 202/391 (51%), Gaps = 69/391 (17%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKAN-------------SLKED 190
GHA V DIIRRI+ YFH I ++TD+DDKII +A ++ +
Sbjct: 65 GHARNYVSTDIIRRIMRDYFHFDVKFIMNITDVDDKIILRARQQHLFNEFVSAHPTITAE 124
Query: 191 YKTVAKRYFLRLIFKIL-----------HQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDE 239
+A+ + + K L +Q+ V K+ A V +G L ++ D+
Sbjct: 125 VLDIARNAYTAYLKKNLPLLNPELPPAQYQEEVEKVY-----ATVLNGGPLPGNEKAGDD 179
Query: 240 LLALGVQIKD--------QKCEATWQFKDGKVFSDRVFIS-----LPLYLILIQVSLLGP 286
+ + IK + E+ Q K F++ + + LP YL ++ S +
Sbjct: 180 EAKVKMHIKTVASAAKVIAQAESLDQAATPKGFAESFYTNAQDLLLP-YLDSLKASSIN- 237
Query: 287 LTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI 346
+F L +YE + + M VL P TRV+E+ I F++ +++ K Y+
Sbjct: 238 -ADDHSIFTKLTK-KYEERFMKDMRDLNVLDPDELTRVTEYGAEIADFVEKIVENKFGYV 295
Query: 347 GSDHSVYFDVDSFPH----YFKL--WGRNEN---------ITQHAV-KRSPFDFALWKSA 390
D SVYFD+ +F + Y +L W R++N +T+ KRS DFALWK++
Sbjct: 296 TDDGSVYFDITAFENAGHPYARLEPWSRSDNKLVAEGEGALTKKTTEKRSASDFALWKAS 355
Query: 391 KPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHN 450
KPGEP + S+WG+GRPGWHIECSAMAS G Q+D+H+GG+DL FPHH+NE AQS A+ +
Sbjct: 356 KPGEPSWTSSWGRGRPGWHIECSAMASAKLGKQMDIHSGGVDLAFPHHDNELAQSEAYWS 415
Query: 451 QS-----QWVNYWLHTGHL--RGTDGTRRLR 474
QWVNY+LH GHL +G+ ++ L+
Sbjct: 416 HGHPHTDQWVNYFLHMGHLSIQGSKMSKSLK 446
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 8/104 (7%)
Query: 14 ATSCESPKWSLPSGYDTG------IKIYNPITKTKVPFIIQNKNHLK--WYACGPTVYDS 65
AT+ + P W P+ Y +KI+N +T++K PFI + K WYACGPTVYD
Sbjct: 2 ATARQQPPWRQPTEYPEAKARLPPLKIWNSLTRSKNPFIPIDPEGKKVTWYACGPTVYDD 61
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
H+GHA V DIIRRI+ YFH I ++TD+DDKII +A
Sbjct: 62 AHLGHARNYVSTDIIRRIMRDYFHFDVKFIMNITDVDDKIILRA 105
>gi|168008202|ref|XP_001756796.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692034|gb|EDQ78393.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 811
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 130/376 (34%), Positives = 190/376 (50%), Gaps = 33/376 (8%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA V DIIRRILE YFH + + +VTD+DDKIIN+A N L + Y++ A L
Sbjct: 54 GHARNYVTFDIIRRILEDYFHYNVKYVMNVTDVDDKIINRARRNYLMDQYRSGA--IDLN 111
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGV---QIKDQKCEATWQF 258
+ + L + + +L KK G + + + LA V Q+K K
Sbjct: 112 KVIEDLERAMEEELVKQQKKISDTEGGLEKATSSRQKDDLADRVKQEQLKVTKINEARDL 171
Query: 259 KDGKVFSDRVFISLPLYLILI----QVSLLGPLTLR---TVVFEFLFN---FRYELEYFE 308
G+ R +L+ SL L R TV ++ +YE E+++
Sbjct: 172 LQGQKEEARKLGGKEGINMLLGGSAADSLASQLDARLGATVTDHAIYKSHTLKYENEFWD 231
Query: 309 SMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGR 368
M G P RV+E++ I +++ +L K AY+ ++ SVYFD +F +G+
Sbjct: 232 DMTALGCGYPDVLVRVTEYMDKIIEYVEVVLANKFAYV-ANGSVYFDTKAFREAGHQYGK 290
Query: 369 NENIT--------------QHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
+ + KR+ DFALWK +KPGEP +ES WG GRPGWHIECSA
Sbjct: 291 LNPAAVGSSLLASESESNFETSEKRTSCDFALWKKSKPGEPAWESPWGLGRPGWHIECSA 350
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLR 474
MAS G +D+H+GG DL+FPHH+NE AQS A+ + +WV Y+ H+GHL DG + +
Sbjct: 351 MASDILGDNMDIHSGGHDLQFPHHDNELAQSEAYFHCHEWVRYFFHSGHL-SIDGLKMSK 409
Query: 475 AARFITNLSGSTIGYT 490
+ + + + YT
Sbjct: 410 SLKNFITIKEALTKYT 425
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Query: 19 SPKWSLPS-GYDTGIKIYNPITKTKVPFIIQN-KNHLKWYACGPTVYDSPHIGHAVCNVK 76
+P P G G+ + N + K KVPF ++ ++ WY CGPTVYDS H+GHA V
Sbjct: 2 APASDAPGDGEKRGLMVNNSLCKEKVPFFTKDGSRNVTWYICGPTVYDSSHVGHARNYVT 61
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVA 120
DIIRRILE YFH + + +VTD+DDKIIN+A N L + Y++ A
Sbjct: 62 FDIIRRILEDYFHYNVKYVMNVTDVDDKIINRARRNYLMDQYRSGA 107
>gi|159126589|gb|EDP51705.1| cysteinyl-tRNA synthetase [Aspergillus fumigatus A1163]
Length = 808
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 134/391 (34%), Positives = 202/391 (51%), Gaps = 69/391 (17%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKAN-------------SLKED 190
GHA V DIIRRI+ YFH I ++TD+DDKII +A ++ +
Sbjct: 65 GHARNYVSTDIIRRIMRDYFHFDVKFIMNITDVDDKIILRARQQHLFNEFVSAHPTITAE 124
Query: 191 YKTVAKRYFLRLIFKIL-----------HQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDE 239
+A+ + + K L +Q+ V K+ A V +G L ++ D+
Sbjct: 125 VLDIARNAYTAYLKKNLPLLNPELPPAQYQEEVEKVY-----ATVLNGGPLPGNEKAGDD 179
Query: 240 LLALGVQIKD--------QKCEATWQFKDGKVFSDRVFIS-----LPLYLILIQVSLLGP 286
+ + IK + E+ Q K F++ + + LP YL ++ S +
Sbjct: 180 EAKVKMHIKTVASAAKVIAQAESLDQAATPKGFAESFYTNAQDLLLP-YLDSLKASSIN- 237
Query: 287 LTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI 346
+F L +YE + + M VL P TRV+E+ I F++ +++ K Y+
Sbjct: 238 -ADDHSIFTKLTK-KYEERFMKDMRDLNVLDPDELTRVTEYGAEIADFVEKIVENKFGYV 295
Query: 347 GSDHSVYFDVDSFPH----YFKL--WGRNEN---------ITQHAV-KRSPFDFALWKSA 390
D SVYFD+ +F + Y +L W R++N +T+ KRS DFALWK++
Sbjct: 296 TDDGSVYFDITAFENAGHPYARLEPWSRSDNKLVAEGEGALTKKTTEKRSASDFALWKAS 355
Query: 391 KPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHN 450
KPGEP + S+WG+GRPGWHIECSAMAS G Q+D+H+GG+DL FPHH+NE AQS A+ +
Sbjct: 356 KPGEPSWTSSWGRGRPGWHIECSAMASAKLGKQMDIHSGGVDLAFPHHDNELAQSEAYWS 415
Query: 451 QS-----QWVNYWLHTGHL--RGTDGTRRLR 474
QWVNY+LH GHL +G+ ++ L+
Sbjct: 416 HGHPHTDQWVNYFLHMGHLSIQGSKMSKSLK 446
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 8/104 (7%)
Query: 14 ATSCESPKWSLPSGYDTG------IKIYNPITKTKVPFIIQNKNHLK--WYACGPTVYDS 65
AT+ + P W P+ Y +KI+N +T++K PFI + K WYACGPTVYD
Sbjct: 2 ATARQQPPWRQPTEYPEAKARLPPLKIWNSLTRSKNPFIPIDPEGKKVTWYACGPTVYDD 61
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
H+GHA V DIIRRI+ YFH I ++TD+DDKII +A
Sbjct: 62 AHLGHARNYVSTDIIRRIMRDYFHFDVKFIMNITDVDDKIILRA 105
>gi|170093199|ref|XP_001877821.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647680|gb|EDR11924.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 796
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 123/358 (34%), Positives = 186/358 (51%), Gaps = 42/358 (11%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA V DI+RRI+ YF + +VTDIDDKII +A N L + ++
Sbjct: 92 GHARNYVTQDILRRIMSDYFGYDVHFVMNVTDIDDKIIERARQNHLLDTFRIQTTTLSAA 151
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTK-CDEF-----------RDELLALGVQIKD 249
LI ++ + ++ + + +K + ++ CD RDE +
Sbjct: 152 LIDQV---RDAWRIYVRERLSKGEEDAAFSRICDSITNPDWKQECLKRDEKFDMHFS-SA 207
Query: 250 QKCEATWQFKDGKVFSDRVFISLPLYLI-----LIQVSLLGPL--TLRTVVFEFLFNFRY 302
++C Q ++ + V + + LI ++ +SL L T+ +
Sbjct: 208 RRCLNALQTAQTQLGTGNVGLDVTHQLIEDSRDILAISLDAQLKSTVTDPAISRSLAAYW 267
Query: 303 ELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-- 360
E ++F+ M + V P TRV+E++P I ++++ ++ AY ++ SVYFD +F
Sbjct: 268 EGKFFDEMARLKVREPDIVTRVTEYVPEIVAYVERIIQNGYAY-EAEGSVYFDTLTFDGT 326
Query: 361 ---HYFKL--WGRNEN---------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRP 406
+Y KL W + ++ +RSP DFALWK++KPGEP + S WG GRP
Sbjct: 327 DGHNYAKLEPWSKGNRELLEGGEGALSSRTGRRSPSDFALWKASKPGEPSWPSPWGPGRP 386
Query: 407 GWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
GWHIECS MAS FG +D+H+GG DL FPHH+NE AQ+ A+HN S WVNY+LHTGHL
Sbjct: 387 GWHIECSVMASAIFGENIDIHSGGSDLAFPHHDNEMAQAEAYHNCSPWVNYFLHTGHL 444
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 2/101 (1%)
Query: 11 LSYATSCESPKWSLP--SGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHI 68
L+ + S + P WS P + +++YN +TKTK F+ N H+KWY CGPTVYD+ H+
Sbjct: 32 LATSMSVQQPPWSPPKRQAEEQVLRVYNSLTKTKTEFVPTNGRHVKWYNCGPTVYDASHM 91
Query: 69 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
GHA V DI+RRI+ YF + +VTDIDDKII +A
Sbjct: 92 GHARNYVTQDILRRIMSDYFGYDVHFVMNVTDIDDKIIERA 132
>gi|395517981|ref|XP_003763147.1| PREDICTED: cysteine--tRNA ligase, cytoplasmic [Sarcophilus
harrisii]
Length = 938
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 125/343 (36%), Positives = 170/343 (49%), Gaps = 30/343 (8%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RR+L YF ++TDIDDKII +A N L E Y+ R
Sbjct: 247 GHARSYISFDILRRVLRDYFKYDVFYCMNITDIDDKIIKRARQNHLFEQYREKKPR---- 302
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDG 261
++L LK + + RD + L V+ + ++ +
Sbjct: 303 -ATQLLEDVAAALEPFSLKLSATTDPDKKQMLERIRD-AVQLAVEPLARTVQSHAPGDEI 360
Query: 262 KVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRA 321
++ + L + LG +F L F +E E+ ME VLPP
Sbjct: 361 NACAELLLDKAKDLLSDWLDARLGSQVTDNSIFSKLPQF-WEAEFHRDMEALNVLPPDVL 419
Query: 322 TRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH-----YFKLW----GRNENI 372
TRVSE++P I F+Q ++D Y+ S+ SVYFD F Y KL G + +
Sbjct: 420 TRVSEYVPEIVHFVQKIVDNGYGYV-SNGSVYFDTVKFDSSERHSYAKLVPEAVGDQKAL 478
Query: 373 TQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFG 421
+ + KRSP DFALWK++KPGEP +E WGKGRPGWHIECSAMA G
Sbjct: 479 QEGEGDLSISAERLSEKRSPNDFALWKASKPGEPSWECPWGKGRPGWHIECSAMAGTVLG 538
Query: 422 GQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
+D+H GG DL+FPHH+NE AQS A+ + WV Y+LHTGHL
Sbjct: 539 PSMDIHGGGFDLRFPHHDNELAQSEAYFDNDCWVRYFLHTGHL 581
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P+WS P+G + +++YN +T+TK F+ Q + WY CGPTVYD+ H+GHA + D
Sbjct: 197 PQWSPPAGTEPCKLRLYNSLTRTKDEFVPQQGRRVTWYCCGPTVYDASHMGHARSYISFD 256
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKR 122
I+RR+L YF ++TDIDDKII +A N L E Y+ R
Sbjct: 257 ILRRVLRDYFKYDVFYCMNITDIDDKIIKRARQNHLFEQYREKKPR 302
>gi|238504958|ref|XP_002383708.1| cysteinyl-tRNA synthetase [Aspergillus flavus NRRL3357]
gi|220689822|gb|EED46172.1| cysteinyl-tRNA synthetase [Aspergillus flavus NRRL3357]
Length = 874
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 196/383 (51%), Gaps = 53/383 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKAN-------------SLKED 190
GHA V DIIRRI+ YF + ++TD+DDKII + ++ D
Sbjct: 133 GHARNYVSTDIIRRIMRDYFKFDVNFVMNITDVDDKIILRGRQQHLFTEFTSEHPTIDGD 192
Query: 191 YKTVAKRYFLRLIFKILH----QKVVRKLAIDLKK--AKVDSGPVLTKCDEFRDELLALG 244
VAK+ + I K L V + +++K A V +G L ++ D+
Sbjct: 193 VLDVAKKAYTAYIKKNLPLLSPDLPVSQYKDEVEKTYATVLNGGPLPGNEKAGDDEAKAK 252
Query: 245 VQIKDQK------CEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRT--VVFEF 296
+ IK EA + K F+++ + L+ SL G +F
Sbjct: 253 MHIKTVASAAKVIAEAEQSGERPKGFAEKFYTEAQDLLLPYLDSLKGTSINADDHGIFTK 312
Query: 297 LFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV 356
L RYE + + M VL P TRV+E+ I F++ ++ Y+ D SVYFD+
Sbjct: 313 LTK-RYEERFLKDMRDLNVLDPNEITRVTEYGAEIADFVEKIVKNNFGYVTDDGSVYFDI 371
Query: 357 DSFPH----YFKL--WGRNEN---------ITQHAV-KRSPFDFALWKSAKPGEPWYESA 400
++F Y +L W R+++ +T+ A KRS DFALWK++KPGEP + S+
Sbjct: 372 EAFEAAGHPYARLEPWNRSDSKLLAEGEGSLTKKATDKRSASDFALWKASKPGEPSWASS 431
Query: 401 WGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF----HNQS---Q 453
WG+GRPGWHIECSAMAS G Q+D+H+GG+DL FPHH+NE AQS A+ HN S Q
Sbjct: 432 WGRGRPGWHIECSAMASARLGKQLDIHSGGVDLAFPHHDNELAQSEAYWADSHNHSHDEQ 491
Query: 454 WVNYWLHTGHL--RGTDGTRRLR 474
WVNY+ H GHL +G+ ++ L+
Sbjct: 492 WVNYFFHMGHLSIQGSKMSKSLK 514
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLK--WYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
+K++N +T++K PFI +K K WYACGPTVYD H+GHA V DIIRRI+ YF
Sbjct: 94 LKVWNSLTRSKNPFIPIDKEGKKVSWYACGPTVYDDAHLGHARNYVSTDIIRRIMRDYFK 153
Query: 90 IHSIVISSVTDIDDKII 106
+ ++TD+DDKII
Sbjct: 154 FDVNFVMNITDVDDKII 170
>gi|336384731|gb|EGO25879.1| hypothetical protein SERLADRAFT_437591 [Serpula lacrymans var.
lacrymans S7.9]
Length = 774
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/364 (35%), Positives = 184/364 (50%), Gaps = 45/364 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA V DI+RRI+ YF + +VTDIDDKII +A N L +++
Sbjct: 57 GHARNYVTQDILRRIMTDYFGYDVHFVQNVTDIDDKIILRARQNHLFNKFRSETTSLSPE 116
Query: 202 LIFKI-------LHQKVVRKLAIDLKKAKVDSGPVLTK-CDEFRDELLALGVQIKDQKCE 253
LI +I +H+K+ + L + + D + D F+D+ +D+K +
Sbjct: 117 LIAQIQEAWSIYVHEKISKGLPESERPSNGDEAKSWPRLADLFKDKAWKQECLKRDEKFD 176
Query: 254 ----------ATWQFKDGKVFSDRVFISLPLYLI-----LIQVSL---LGPLTLRTVVFE 295
+ Q +G + S+ V + L+ ++ VSL +F
Sbjct: 177 MHFSAANKAYSAVQVAEGLLRSNCVGQDVTHQLLEESRDILAVSLDEKYKSTVTDPSIFR 236
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFD 355
L + +E ++F ME+ V P TRV+E++P + F+ ++ Y + SVYFD
Sbjct: 237 SLAAY-WEGQFFSDMERLRVREPDTVTRVTEYVPEVVDFVHGIIKNGYGY-EHEGSVYFD 294
Query: 356 VDSFP-----HYFKL--WGRN--------ENITQHAVKRSPFDFALWKSAKPGEPWYESA 400
+F Y KL W + E +RS DFALWK++KPGEP + S
Sbjct: 295 TSAFDTSEGHDYAKLEPWSKGNRELLEEGEGALSSRTQRSASDFALWKASKPGEPSWPSP 354
Query: 401 WGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLH 460
WG GRPGWHIECS MAS FG +D+H+GGIDL FPHH+NE AQS A+HN WVNY++H
Sbjct: 355 WGAGRPGWHIECSVMASAVFGDNMDIHSGGIDLAFPHHDNEMAQSEAYHNCGSWVNYFIH 414
Query: 461 TGHL 464
TGHL
Sbjct: 415 TGHL 418
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 79/137 (57%), Gaps = 11/137 (8%)
Query: 16 SCESPKWSLPSGY--DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
S + P WSLPS + +K+YN +TKTK FI ++ +KWY CGPTVYD+ H+GHA
Sbjct: 2 SVQQPPWSLPSRKTDEPVLKLYNSLTKTKTEFIPRDGRRVKWYNCGPTVYDASHMGHARN 61
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLPLIFKI 131
V DI+RRI+ YF + +VTDIDDKII +A N L +++ LI +I
Sbjct: 62 YVTQDILRRIMTDYFGYDVHFVQNVTDIDDKIILRARQNHLFNKFRSETTSLSPELIAQI 121
Query: 132 -------LHQKVVGSIP 141
+H+K+ +P
Sbjct: 122 QEAWSIYVHEKISKGLP 138
>gi|121712962|ref|XP_001274092.1| cysteinyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
gi|119402245|gb|EAW12666.1| cysteinyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
Length = 808
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 135/388 (34%), Positives = 197/388 (50%), Gaps = 63/388 (16%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS-------------LKED 190
GHA V DIIRRI+ YFH I ++TD+DDKII +A + +
Sbjct: 65 GHARNYVSTDIIRRIMRDYFHFDVKFIMNITDVDDKIILRARQQHLFNEFVTAHPVIDAE 124
Query: 191 YKTVAKRYFLRLIFKIL-----------HQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDE 239
VAK + + K L +Q V K+ A V +G L ++ D+
Sbjct: 125 VLDVAKSAYTAYLKKNLPLLSSELSPSQYQDEVEKVY-----AVVLNGGPLPGNEKAGDD 179
Query: 240 LLALGVQIKD--------QKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRT 291
+ + IK + EA Q F++ + + L+ +L G
Sbjct: 180 EAKVKMHIKTVASAAKVIAQAEAQDQSTTPSGFAESFYTNAQDLLLPYLDALKGSSINAD 239
Query: 292 --VVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSD 349
+F L +YE + + M VL P TRV+E+ I F++ ++ K Y+ D
Sbjct: 240 DHSIFTKLTK-KYEDRFLKDMRDLNVLDPDELTRVTEYGAEIADFVEKIVANKFGYVTDD 298
Query: 350 HSVYFDVDSFPH----YFKL--WGRNEN---------ITQHAV-KRSPFDFALWKSAKPG 393
SVYFD+++F Y +L W R++N +T+ KRS DFALWK++KPG
Sbjct: 299 GSVYFDINAFEAAGHPYARLEPWSRSDNKLLAEGEGALTKKTTEKRSASDFALWKASKPG 358
Query: 394 EPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF--HNQ 451
EP + S+WG+GRPGWHIECSAMAS G ++D+H+GG+DL FPHH+NE AQS A+ H+
Sbjct: 359 EPSWTSSWGRGRPGWHIECSAMASARLGKEMDIHSGGVDLAFPHHDNELAQSEAYWSHDH 418
Query: 452 S---QWVNYWLHTGHL--RGTDGTRRLR 474
S QWVNY+LH GHL +G+ ++ L+
Sbjct: 419 SHTDQWVNYFLHMGHLSIQGSKMSKSLK 446
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 62/104 (59%), Gaps = 8/104 (7%)
Query: 14 ATSCESPKWSLPSGYDTG------IKIYNPITKTKVPF--IIQNKNHLKWYACGPTVYDS 65
AT+ + P W P+ + +KI+N +T++K PF I + WYACGPTVYD
Sbjct: 2 ATARQQPPWRQPTVHPETEARLPPLKIWNSLTRSKTPFVPIDPEAKKVTWYACGPTVYDD 61
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
H+GHA V DIIRRI+ YFH I ++TD+DDKII +A
Sbjct: 62 AHLGHARNYVSTDIIRRIMRDYFHFDVKFIMNITDVDDKIILRA 105
>gi|154333641|ref|XP_001563077.1| putative cysteinyl-tRNA synthetase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060087|emb|CAM37400.1| putative cysteinyl-tRNA synthetase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 780
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 133/395 (33%), Positives = 201/395 (50%), Gaps = 48/395 (12%)
Query: 104 KIINKANSLKEDYKTVAKRYFL-----PLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRI 158
K++N ED+ R P ++ + H GHA + DIIRRI
Sbjct: 39 KVMNSLTETLEDFAPRDGRVVRWYTCGPTVYDLSHM---------GHARAYLTFDIIRRI 89
Query: 159 LEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKT--VAKRYFLRLIFKILHQKVVRK 214
+E YF + ++TDIDDKII +A L +D+K + + +L+ +
Sbjct: 90 MEDYFGYSVLYQMNITDIDDKIIKRARVGKLLDDFKEGELHRSNVEKLVAFTAEAVAAAE 149
Query: 215 LAIDLKKAKVDSGPVLTKCD---EFRDELLALGVQIKDQKCEATWQFKDGKVFSDRVFIS 271
+ +KAK+ S P+ + + E L +Q+K+ + T K+ + F +
Sbjct: 150 SNLAKRKAKL-SEPIPEGANSRVKADHEEKMLELQLKESQLAET---KEKIAAAKDDFAA 205
Query: 272 LPLYLILIQVSLLGPLTLRTVVFEFLFN---FRYELEYFESMEKFGVLPPTRATRVSEFI 328
L + LL ++ + +F +YE +FE M++ G+ P +RV+E++
Sbjct: 206 LFAAASGVNGDLLDERNGHSISDQQIFEDHARKYERAFFEDMQRLGIRDPDIVSRVTEYV 265
Query: 329 PHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH----YFKLW-GRNENITQHAV------ 377
P + F+Q ++D AY+G + SV+FD +++ Y KL G + N T+ +
Sbjct: 266 PQVVEFVQKIIDNGFAYVG-ETSVFFDTEAYIRAGHDYPKLKPGGDRNTTEEEMAEGEGT 324
Query: 378 --------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTG 429
KRS DFALWK +KPGEP + S WG GRPGWHIECS MAS G +D+H+G
Sbjct: 325 LTKAVEGEKRSSNDFALWKFSKPGEPRWPSPWGAGRPGWHIECSVMASDVLGENMDIHSG 384
Query: 430 GIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G DLKFPHH+NE AQS A + +QWVNY+LH GHL
Sbjct: 385 GWDLKFPHHDNECAQSEACNLHNQWVNYFLHCGHL 419
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P D G+K+ N +T+T F ++ ++WY CGPTVYD H+GHA + D
Sbjct: 25 PVWYPPLKLDGNGLKVMNSLTETLEDFAPRDGRVVRWYTCGPTVYDLSHMGHARAYLTFD 84
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYK 117
IIRRI+E YF + ++TDIDDKII +A L +D+K
Sbjct: 85 IIRRIMEDYFGYSVLYQMNITDIDDKIIKRARVGKLLDDFK 125
>gi|327292372|ref|XP_003230885.1| cysteinyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
gi|326466921|gb|EGD92374.1| cysteinyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
Length = 804
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 197/390 (50%), Gaps = 72/390 (18%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V DI+RRIL YF I ++TD+DDKII T ++ L
Sbjct: 65 GHARNYVSADIVRRILRDYFKFDVRYIMNITDVDDKII-----------TRGRQQHLYNQ 113
Query: 204 FKILHQKVVRKLAIDLKKAKVDS--------GPVLTKCDEFRDELLALGVQIKDQKCEAT 255
F H + ++L +D+ KA ++ PV T +EF++ + + D K
Sbjct: 114 FSAEHPSIDQEL-LDIAKAAYEAYITDNLPLVPVSTPTNEFKETAEKVYAAVLDGKP-LE 171
Query: 256 WQFKDGKVFSD-RVFI---SLPLYLILIQVSLLGPLTLRT-------VVFEFLFNFR--- 301
K G+ + +++I S + + + G + + T +++ L +
Sbjct: 172 GNLKPGEPEAKVKMYIKTLSTAAEALTVASTPGGSIPVATFYDKTQDILYPHLDTLKGAS 231
Query: 302 ---------------YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI 346
YE + + + VL P TRV+EF+P I SF++ +++ K Y+
Sbjct: 232 IQGSDHSIFTRLTREYEDRFMQDVRDLNVLDPDEITRVTEFMPEIVSFVERIIEHKFGYV 291
Query: 347 GSDHSVYFDVDSFP----HYFKL--WGRNENITQ----------HAVKRSPFDFALWKSA 390
D SVYFD+++F Y +L W RN+ Q A K+S DFALWK++
Sbjct: 292 TPDGSVYFDIENFEAAGNSYARLEPWNRNDANRQSEGEGSLSNKQAEKKSSADFALWKAS 351
Query: 391 KPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHN 450
K GEP + S WG GRPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS A+ +
Sbjct: 352 KAGEPSWPSPWGNGRPGWHIECSAMASSRLGKQMDIHSGGIDLAFPHHDNEIAQSEAYWS 411
Query: 451 QS----QWVNYWLHTGHL--RGTDGTRRLR 474
+ QWVNY++H GHL +G+ ++ L+
Sbjct: 412 STCSHVQWVNYFIHMGHLSIQGSKMSKSLK 441
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Query: 14 ATSCESPKWSLPSGYD------TGIKIYNPITKTKVPFIIQNKNHLK--WYACGPTVYDS 65
A E P W P+ + +KI+N +T++K PF+ + K WYACGPTVYD
Sbjct: 2 AAPREQPLWQQPTPHQGLQRELPPLKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDD 61
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
H+GHA V DI+RRIL YF I ++TD+DDKII +
Sbjct: 62 AHLGHARNYVSADIVRRILRDYFKFDVRYIMNITDVDDKIITRG 105
>gi|302506132|ref|XP_003015023.1| hypothetical protein ARB_06783 [Arthroderma benhamiae CBS 112371]
gi|291178594|gb|EFE34383.1| hypothetical protein ARB_06783 [Arthroderma benhamiae CBS 112371]
Length = 844
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 130/389 (33%), Positives = 192/389 (49%), Gaps = 70/389 (17%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V DI+RRIL YF I ++TD+DDKII T ++ L
Sbjct: 105 GHARNYVSADIVRRILRDYFKFDVKYIMNITDVDDKII-----------TRGRQQHLYNQ 153
Query: 204 FKILHQKVVRKLAIDLKKAKVDS--------GPVLTKCDEFRDELLALGVQIKDQK---C 252
F H + ++L +D KA ++ PV T E +D + + D K
Sbjct: 154 FSAEHPSIDQEL-LDTAKAAYEAYITKNLPLVPVSTPTHELKDTAEKVYAAVLDGKPLEG 212
Query: 253 EATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRT-------VVFEFLFNFR---- 301
+ + KV +S + + + G + + T +++ +L +
Sbjct: 213 NSKPGEPEAKVKMYIKTLSTAAEALTVASTPGGSIPVATFYDKTQDILYPYLDTLKGASI 272
Query: 302 --------------YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIG 347
YE + + + VL P TRV+EF+P I SF++ +++ K Y+
Sbjct: 273 QGSDHSIFTRLTTEYENRFMQDVRDLNVLDPDEITRVTEFMPEIVSFVERIIEHKFGYVT 332
Query: 348 SDHSVYFDVDSFP----HYFKL--WGRNENITQ----------HAVKRSPFDFALWKSAK 391
D SVYFD+++F Y +L W RN+ Q A K+S DFALWK++K
Sbjct: 333 PDGSVYFDIENFEAAGNSYARLEPWNRNDANRQSEGEGSLSNKQAEKKSSADFALWKASK 392
Query: 392 PGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQ 451
GEP + S WG GRPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS A+ +
Sbjct: 393 AGEPSWPSPWGNGRPGWHIECSAMASSRLGKQMDIHSGGIDLAFPHHDNEIAQSEAYWSS 452
Query: 452 S----QWVNYWLHTGHL--RGTDGTRRLR 474
+ QWVNY++H GHL +G+ ++ L+
Sbjct: 453 TCSHVQWVNYFIHMGHLSIQGSKMSKSLK 481
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 8/111 (7%)
Query: 7 SSLALSYATSCESPKWSLPSGYD------TGIKIYNPITKTKVPFIIQNKNHLK--WYAC 58
+S ++S A E P W P+ + +KI+N +T++K PF+ + K WYAC
Sbjct: 35 TSPSVSMAAPREQPPWQQPTPHQGLQRELPPLKIWNSLTRSKTPFVPLDPEGKKVTWYAC 94
Query: 59 GPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
GPTVYD H+GHA V DI+RRIL YF I ++TD+DDKII +
Sbjct: 95 GPTVYDDAHLGHARNYVSADIVRRILRDYFKFDVKYIMNITDVDDKIITRG 145
>gi|308802207|ref|XP_003078417.1| Cysteinyl-tRNA synthetase (ISS) [Ostreococcus tauri]
gi|116056869|emb|CAL53158.1| Cysteinyl-tRNA synthetase (ISS) [Ostreococcus tauri]
Length = 503
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 137/410 (33%), Positives = 197/410 (48%), Gaps = 75/410 (18%)
Query: 102 DDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTR------GHAVCNVKLDII 155
DD+ + + L + T K F+PL + + G PT GHA V D++
Sbjct: 39 DDETLRRGPRLLNTF-TKTKVPFVPLSGNSVGWYICG--PTVYDSAHVGHARNYVNFDVL 95
Query: 156 RRILEHYFHIHSIVISSVTDIDDKIINKANSLK-EDYKTVAKRYFLRLIFKILHQKVVRK 214
RR++ YF + +VTDIDDKII +A++ + +D A+R + + + +
Sbjct: 96 RRVMSEYFGYDVRFVMNVTDIDDKIIMRAHTRRAQDVVESARRLGAKASAETIAAAAETE 155
Query: 215 LAIDLKKAKVDSGPVLTKCDEFRDELL------ALGVQIKDQKCEATWQFKDGKVFSDRV 268
+ + G L K DE L+ A G D C W+ +DG
Sbjct: 156 TLL------AEGGKPLGKLDELTRGLVERVRVDAKGALASDDACARDWKIQDG------- 202
Query: 269 FISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFI 328
YL L + +E E+ E M+ G+ P TRVSE++
Sbjct: 203 ------YLELAR--------------------EFEAEFMEDMKSLGIARPDALTRVSEYV 236
Query: 329 PHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH-----YFKLW------------GRNEN 371
+ +IQ +++ AY S++SVYFDV +F Y KL G
Sbjct: 237 DKVILYIQVIINKGFAY-ESNNSVYFDVKAFEEAENHKYGKLNKNAMANVEEAMDGEGAL 295
Query: 372 ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGI 431
+ + KRS FDF LWK++K GEP + S WG GRPGWHIECSAM S G VD++ GGI
Sbjct: 296 AAEKSEKRSEFDFVLWKASKSGEPSWSSPWGMGRPGWHIECSAMCSDVLGKSVDINGGGI 355
Query: 432 DLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAAR-FIT 480
DL FPHHEN+ AQS A ++ QWVN+++HTGHL DG + ++ + FIT
Sbjct: 356 DLNFPHHENQLAQSEAHYDIEQWVNFFIHTGHLH-IDGLKMSKSLKNFIT 404
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
G ++ N TKTKVPF+ + N + WY CGPTVYDS H+GHA V D++RR++ YF
Sbjct: 46 GPRLLNTFTKTKVPFVPLSGNSVGWYICGPTVYDSAHVGHARNYVNFDVLRRVMSEYFGY 105
Query: 91 HSIVISSVTDIDDKIINKANSLK-EDYKTVAKR 122
+ +VTDIDDKII +A++ + +D A+R
Sbjct: 106 DVRFVMNVTDIDDKIIMRAHTRRAQDVVESARR 138
>gi|405118312|gb|AFR93086.1| cysteine-tRNA ligase [Cryptococcus neoformans var. grubii H99]
Length = 785
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 137/375 (36%), Positives = 180/375 (48%), Gaps = 59/375 (15%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS----------------- 186
GHA + DI+RRIL YF + +VTDIDDKII +A
Sbjct: 62 GHARNYLTQDIVRRILRDYFSYDVNFVMNVTDIDDKIILRARESYLLDQAISSNPALSPE 121
Query: 187 LKEDYKTVAKRYFLR----LIFKILHQKVVRKLAI-DLKKAKVDSGPVLTKCDEFRDELL 241
L D + +Y + L + H I DL K S K R+E
Sbjct: 122 LVSDVEAAFTKYLAKPLKSLTTPLEHPPNATSFEILDLLLQKDQSEAQWAKEAREREEKF 181
Query: 242 A--LGVQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGP---------LTLR 290
L K + Q K GK + + L+ +LGP +T
Sbjct: 182 GMYLASLSKARDAYNVAQQKVGKPEGEGQAVK---DLVEGATDVLGPYLGEKLGHTITDP 238
Query: 291 TVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDH 350
V L ++ +E +F M + VLPP TRVSE++P I SF+Q ++D AY G D
Sbjct: 239 IAVCRRLASY-WENAFFTDMARLRVLPPDTITRVSEYVPEIVSFVQRIIDNGFAYEG-DG 296
Query: 351 SVYFDVDSFP---------HYFKLWGRNEN-----------ITQHAVKRSPFDFALWKS- 389
S++FDVD F Y KL ++ +T KR P DFALWK+
Sbjct: 297 SIWFDVDKFEGAEGDGFRHEYAKLQPSSKGNKKLLDEGEGALTGSQGKRRPADFALWKAK 356
Query: 390 AKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFH 449
+KPGEP + S WG+GRPGWHIECS MAS G +D+H+GG+DL FPHH+NE AQ+ A+H
Sbjct: 357 SKPGEPAWPSPWGEGRPGWHIECSVMASAILGSGMDIHSGGVDLMFPHHDNELAQAEAYH 416
Query: 450 NQSQWVNYWLHTGHL 464
QWVNY+LHTGHL
Sbjct: 417 GCKQWVNYFLHTGHL 431
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 20 PKWSLP--SGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
P W P S + +++YN +T++K F+ N + WY CGPTVYDS H+GHA +
Sbjct: 11 PTWYSPAKSTDEPVLRVYNSLTRSKDVFVPTNGRRVDWYNCGPTVYDSSHMGHARNYLTQ 70
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
DI+RRIL YF + +VTDIDDKII +A
Sbjct: 71 DIVRRILRDYFSYDVNFVMNVTDIDDKIILRA 102
>gi|396491761|ref|XP_003843629.1| similar to cysteinyl-tRNA synthetase [Leptosphaeria maculans JN3]
gi|312220209|emb|CBY00150.1| similar to cysteinyl-tRNA synthetase [Leptosphaeria maculans JN3]
Length = 803
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 139/374 (37%), Positives = 180/374 (48%), Gaps = 61/374 (16%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII------------NKAN-SLKED 190
GHA V +DI+RRIL YF + + ++TD+DDKII K N ++ E+
Sbjct: 62 GHARNYVTIDILRRILSDYFEYKLLFVQNITDVDDKIILRGRQQHLLAKFKKQNPTVTEE 121
Query: 191 YKTVAKRYFLRLIFKIL------------HQKVVRKLAIDLKKAKVD-SGPVLTKCDEFR 237
+ F + K L +Q+ K A ++ VD +GP K + +
Sbjct: 122 VINTTIKAFDAYVKKNLPLLSDQVNIGSFNQESAEKYANVIQGKSVDGTGPPGDKEAKIK 181
Query: 238 DELLALGVQIKDQKCEATWQFKDGKVF-SDRVFISLP----LYLILIQVSLLGPLTLRTV 292
L + + KD F S + LP LY I S T T
Sbjct: 182 MHLRTASTAVTSLLAPSKSTPKDVDSFYSGAEDVLLPYLDSLYGSTIDASDHSVFTKLTQ 241
Query: 293 VFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSV 352
+E FN E M VL P TRV+E+ I +F++ ++D AY SD SV
Sbjct: 242 KYEARFN--------EDMRSLNVLDPHVVTRVTEYGDQIVTFVEKIVDNGFAYKTSDGSV 293
Query: 353 YFDVDSFP-----HYFKL--WGRNENITQH-----------AVKRSPFDFALWKSAKPGE 394
YFD+DSF HY +L W R + Q + KRS DFALWKS+KPGE
Sbjct: 294 YFDIDSFEKIPGNHYARLEPWNRGDKGLQADGEGALSTQKTSEKRSDADFALWKSSKPGE 353
Query: 395 PWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF----HN 450
P + S WG GRPGWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A
Sbjct: 354 PAWNSPWGPGRPGWHIECSVMASDVLGKQMDVHSGGIDLCFPHHDNELAQSEAHWSGKDG 413
Query: 451 QSQWVNYWLHTGHL 464
QWVNY+LH GHL
Sbjct: 414 GHQWVNYFLHMGHL 427
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 20 PKWSLP-SGYDTGIKIYNPITKTKVPF--IIQNKNHLKWYACGPTVYDSPHIGHAVCNVK 76
P W P S +K++N +T++K F I +KWY CGPTVYD H+GHA V
Sbjct: 10 PPWKEPKSSSPAKLKVWNSLTRSKNEFAPIDPQGKLVKWYNCGPTVYDDAHLGHARNYVT 69
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKII 106
+DI+RRIL YF + + ++TD+DDKII
Sbjct: 70 IDILRRILSDYFEYKLLFVQNITDVDDKII 99
>gi|164425498|ref|XP_960203.2| hypothetical protein NCU05642 [Neurospora crassa OR74A]
gi|157070948|gb|EAA30967.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 806
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 187/394 (47%), Gaps = 64/394 (16%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRIL HYF + + TD+DDKII KA + E K
Sbjct: 42 GHARNYVSTDIIRRILMHYFDYKVNFVMNYTDVDDKIIIKARRKRLLELEKEKPYTPEQI 101
Query: 200 LRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDE-----LLALGVQIKDQKC-- 252
LIFK Q + L + A D+GP+ K E R + +LA G + + K
Sbjct: 102 HNLIFKAF-QAYTKSLPL---LAPQDAGPLDEKNYEERKQAAYGVVLAGGPLVPETKPGD 157
Query: 253 -------------EATWQFKDGKVFSDRVFISLP----LYLILIQVSLLGPLTLRTVVFE 295
A K+G + LP LY I S T T E
Sbjct: 158 AEAKVKMHLNNMDAAAEALKNGSGLDAAEDVLLPYLDSLYKETIDTSDQTIFTDLTKTME 217
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFD 355
F + ME VLPP TRV+E++P I +F++ ++ AY +D SVYFD
Sbjct: 218 KAF--------ADDMEALNVLPPDVITRVTEYVPQIVAFVEQIIQKGFAY-EADGSVYFD 268
Query: 356 VDSFPHYFKLWGR------NENITQH----------AVKRSPFDFALWKSAKPGEPWYES 399
+ +F + R N+ Q K+ DFALWK +KPGEP++ S
Sbjct: 269 IGAFEKAGNTYARLRPESKNDTALQEEGEGSLSTALGGKKRSGDFALWKKSKPGEPYWPS 328
Query: 400 AWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCA-FHN----QSQW 454
WG GRPGWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A FH+ + W
Sbjct: 329 PWGAGRPGWHIECSVMASDKLGEQMDIHSGGIDLAFPHHDNELAQSEAYFHDCCKGEHTW 388
Query: 455 VNYWLHTGHLR--GTDGTRRLRAARFITNLSGST 486
V Y+LH GHL G+ ++ L+ + I + ST
Sbjct: 389 VKYFLHMGHLSIAGSKMSKSLKNFQTIQDALAST 422
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 43 VPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDID 102
VPF+ + + + WYACGPTVYD H+GHA V DIIRRIL HYF + + TD+D
Sbjct: 16 VPFVPKEEGAISWYACGPTVYDLSHLGHARNYVSTDIIRRILMHYFDYKVNFVMNYTDVD 75
Query: 103 DKIINKANSLK----EDYKTVAKRYFLPLIFKILHQKVVGSIP 141
DKII KA + E K LIFK Q S+P
Sbjct: 76 DKIIIKARRKRLLELEKEKPYTPEQIHNLIFKAF-QAYTKSLP 117
>gi|388583917|gb|EIM24218.1| hypothetical protein WALSEDRAFT_34849 [Wallemia sebi CBS 633.66]
Length = 770
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 191/374 (51%), Gaps = 45/374 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA------NSLKEDYKTVAKR 197
GHA + DIIRRIL YF + ++TD+DDKII KA K+D T ++
Sbjct: 67 GHARNYLTQDIIRRILRDYFSYDVKFVMNITDVDDKIILKARHSHLLEKYKQDNPTPNEK 126
Query: 198 YF--LRLIFKILHQKVVRKL----AIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQK 251
L L F+ +KV+ +ID + K + +++ ++ L A KD K
Sbjct: 127 VENDLLLSFQAFVEKVIPLFNNIPSIDALEHKQAAELIVSHA---QNNLQAWSE--KDPK 181
Query: 252 CEATWQ-FKDG-KVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFES 309
Q +DG + S + L G +F L + +E E+F+
Sbjct: 182 AGMYVQTLRDGLEALSSQSIDKAQDILCPYLDKQFGESVRDPAIFRSLAAY-WEGEFFKD 240
Query: 310 MEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP--------- 360
M V P TRVSE++P I +F++ ++ AY SD SVYFD +F
Sbjct: 241 MSALNVEKPDTLTRVSEYVPEIITFVEKIISNGFAYSSSDGSVYFDTKAFDGAKSKNGFE 300
Query: 361 -HYFKL--WGR---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGW 408
Y KL W + +++ K++ DFALWK++KPGEP + S WG+GRPGW
Sbjct: 301 HSYAKLQPWSKGIKELIEEGEGSLSSGTGKKNSSDFALWKTSKPGEPSWTSPWGEGRPGW 360
Query: 409 HIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RG 466
HIECS MAS G +D+H+GG+DLKFPHH+NE AQS A H+ +W+NY+LHTGHL G
Sbjct: 361 HIECSVMASEVLGHNIDIHSGGVDLKFPHHDNEIAQSEACHDCPEWINYFLHTGHLHIEG 420
Query: 467 TDGTRRLRAARFIT 480
++ L+ FIT
Sbjct: 421 QKMSKSLK--NFIT 432
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
Query: 22 WSLPSGY--DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDI 79
W+LP+ + +K+YN ++++KV FI N + WY CGPTVYDS H+GHA + DI
Sbjct: 18 WNLPNKLIEEPSLKVYNSLSRSKVEFIPTNGRTVTWYNCGPTVYDSSHMGHARNYLTQDI 77
Query: 80 IRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYK 117
IRRIL YF + ++TD+DDKII KA + L E YK
Sbjct: 78 IRRILRDYFSYDVKFVMNITDVDDKIILKARHSHLLEKYK 117
>gi|340713780|ref|XP_003395414.1| PREDICTED: cysteinyl-tRNA synthetase, mitochondrial-like [Bombus
terrestris]
Length = 522
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/163 (53%), Positives = 108/163 (66%), Gaps = 1/163 (0%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E+ E M+ V P RV+++IP I F++++LD AY D SVYFD +
Sbjct: 134 YENEFIEDMKMLNVTKPHLYCRVTDYIPQIIQFVKSILDKGNAYTLKDGSVYFDTHKYGM 193
Query: 362 YFKLWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFG 421
Y KL + + H K+SP DF LWK+AK GEP++ES W GRPGWHIECS +AS FG
Sbjct: 194 YGKLSTPMSD-SFHPDKKSPLDFCLWKAAKEGEPFWESPWAPGRPGWHIECSTIASTIFG 252
Query: 422 GQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
VD H+GGIDL FPHHENEEAQSC +H QWVNYW+H G+L
Sbjct: 253 SSVDFHSGGIDLIFPHHENEEAQSCCYHEVEQWVNYWVHYGYL 295
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 90/143 (62%), Gaps = 6/143 (4%)
Query: 18 ESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
+ +W P+GY T I+IYNPITK +VP I++NK L WY CGPTVYDS HIGHAV V
Sbjct: 29 KQAQWLRPTGYKTDIQIYNPITKCEVPLILKNKAVLTWYLCGPTVYDSAHIGHAVTYVYS 88
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVV 137
DIIRRIL +F+I+ + +TDIDDKII ++ LK++YK + + Y I + V
Sbjct: 89 DIIRRILSDHFNINVVTAMCITDIDDKIIARSKELKQNYKDLTEHYENEFIEDMKMLNV- 147
Query: 138 GSIPTRGHAVCNVKLDIIRRILE 160
T+ H C V D I +I++
Sbjct: 148 ----TKPHLYCRVT-DYIPQIIQ 165
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHAV V DIIRRIL +F+I+ + +TDIDDKII ++ LK++YK + + Y I
Sbjct: 80 GHAVTYVYSDIIRRILSDHFNINVVTAMCITDIDDKIIARSKELKQNYKDLTEHYENEFI 139
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGKV 263
D+K V + + ++ +++ I D+ + KDG V
Sbjct: 140 E-------------DMKMLNVTKPHLYCRVTDYIPQIIQFVKSILDKG--NAYTLKDGSV 184
Query: 264 FSD 266
+ D
Sbjct: 185 YFD 187
>gi|302782427|ref|XP_002972987.1| hypothetical protein SELMODRAFT_97996 [Selaginella moellendorffii]
gi|300159588|gb|EFJ26208.1| hypothetical protein SELMODRAFT_97996 [Selaginella moellendorffii]
Length = 457
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/367 (36%), Positives = 187/367 (50%), Gaps = 52/367 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS---LK------EDYKTV 194
GHA V DI+RRILE +F + +VTD+DDKII +A LK +D
Sbjct: 39 GHARNYVTFDILRRILEDFFGYDVFYVMNVTDVDDKIIKRARRDHLLKMYLERVKDPSEN 98
Query: 195 AKRY------FLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIK 248
KRY F RL + QKV ++ +LK KV K +D L+ + I
Sbjct: 99 LKRYSDSDVLFFRLASVCVGQKVKQE---ELKLDKVRQAEEAFKLKRDKDGLMGID-GIS 154
Query: 249 DQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFE 308
+ F K+ D LG ++ RYE E+FE
Sbjct: 155 HLLGDNADDFLASKLDDD-----------------LGHTVTDHGIYR-AHASRYEKEFFE 196
Query: 309 SMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF--PHYFK-- 364
M+ GV PP TRV+++I I +++T++ AY D SVYFD ++F H +
Sbjct: 197 DMKSLGVKPPDVITRVTDYISKIVKYVETIIANGYAY-EVDGSVYFDTEAFNTKHTYGKL 255
Query: 365 ---------LWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAM 415
L +E + K++ DFALWK +K GEP+++S WG GRPGWHIECSAM
Sbjct: 256 NPAAVGCVGLASESETNFKTRNKKNNNDFALWKESKVGEPFWDSPWGPGRPGWHIECSAM 315
Query: 416 ASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRA 475
AS G +D+H+GG DLKFPHH+NE AQ+ A+H+ SQWVNY+ H+GHL +G + ++
Sbjct: 316 ASDVIGEIIDIHSGGADLKFPHHDNELAQAEAYHSCSQWVNYFFHSGHL-SVNGLKMSKS 374
Query: 476 ARFITNL 482
+ T +
Sbjct: 375 LKNFTTI 381
>gi|71406898|ref|XP_805952.1| cysteinyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
gi|70869553|gb|EAN84101.1| cysteinyl-tRNA synthetase, putative [Trypanosoma cruzi]
Length = 785
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/407 (33%), Positives = 194/407 (47%), Gaps = 60/407 (14%)
Query: 102 DDKIINKANSLKEDYKTVAKRYFL--------PLIFKILHQKVVGSIPTRGHAVCNVKLD 153
D K + NSL E + A R P ++++ H GHA + D
Sbjct: 35 DAKGLRVLNSLTESVEPFAPREGRLVRWYACGPTVYELSHM---------GHARAYLTFD 85
Query: 154 IIRRILEHYFHIHSIVISSVTDIDDKIINKA------NSLKEDYKTVAKRYFLRLIFKIL 207
I+RRI+E YF + ++TDIDDKII +A +ED+ + RL+
Sbjct: 86 ILRRIMEDYFGYQVVYQMNITDIDDKIIKRARISALLKRFREDF--LQGSDMARLVAFTA 143
Query: 208 HQKVVRKLAIDLKKAKV-----DSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGK 262
+ A++L + K+ D P K + E + + +K+ + + T + +
Sbjct: 144 EAETAAVEALELARIKLSEPLPDKTPSRIKAER---EEKQMELALKESQLQKTRE-RIAS 199
Query: 263 VFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFR---YELEYFESMEKFGVLPPT 319
+ F L I LL + V + +F YE +FE M + GV P
Sbjct: 200 ATASGNFDELFNAASGINGDLLDEREGQYVTDQSIFEDHARLYERLFFEDMRRLGVRDPD 259
Query: 320 RATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF-------PHYFKLWGRNENI 372
+RV+E++P + FIQ ++D AY G+ S++FD +F P + EN
Sbjct: 260 VVSRVTEYVPQVVDFIQKIMDNGFAYRGTS-SIFFDTTAFLRAGHDYPKLKPVSESGEND 318
Query: 373 TQHAV---------------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
A KR+ DFALWK +KPGEP + S WG+GRPGWHIECS MAS
Sbjct: 319 ATEAEMAEGEGALTVGVAGEKRNANDFALWKFSKPGEPRWPSPWGEGRPGWHIECSVMAS 378
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+H+GG DLKFPHH+NE AQS A H Q QW+NY+LH GHL
Sbjct: 379 DILGTNIDVHSGGWDLKFPHHDNECAQSEACHMQHQWINYFLHCGHL 425
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 20 PKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P D G+++ N +T++ PF + ++WYACGPTVY+ H+GHA + D
Sbjct: 26 PPWYPPVQNDAKGLRVLNSLTESVEPFAPREGRLVRWYACGPTVYELSHMGHARAYLTFD 85
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
I+RRI+E YF + ++TDIDDKII +A
Sbjct: 86 ILRRIMEDYFGYQVVYQMNITDIDDKIIKRA 116
>gi|320165586|gb|EFW42485.1| cysteinyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
Length = 727
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 173/345 (50%), Gaps = 47/345 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA ++ D+IRR+L YFH + ++TD+DDKII KA N L E+Y
Sbjct: 59 GHASTYIQFDVIRRVLADYFHYDMRWVMNITDVDDKIILKARRNHLFEEY---------- 108
Query: 202 LIFKILHQKVVRK---LAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQF 258
+ K L VRK A++ AK ++ L D RD L ++ A
Sbjct: 109 -VAKALAVDQVRKDIAAALEFFAAKTNA---LAADDGKRDFRTKLADKVTALLANAAAPA 164
Query: 259 KDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPP 318
+ D +L +L S G +F + +E ++ M+ +L P
Sbjct: 165 SE---LCDAARDALAEWLD----SQFGASVTDPAIFAKTARY-WEEQFNIDMKALHILEP 216
Query: 319 TRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL-------- 365
R TRVS++I I F++ ++ AY S+ SVYF SF HY KL
Sbjct: 217 DRLTRVSDYIDEIIEFVEKVIGNGYAY-ASNGSVYFSTTSFDQNKGHHYAKLVPEAVGNA 275
Query: 366 ------WGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHF 419
G + K+ P DFALWK +K GEP ++S WGKGRPGWHIECSAMA
Sbjct: 276 ASLAEGEGELSATDAGSDKKHPNDFALWKKSKAGEPAWDSPWGKGRPGWHIECSAMAGKV 335
Query: 420 FGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+H GGIDLKFPHH+NE AQS AF + QW+NY++HTGHL
Sbjct: 336 IGSTLDIHGGGIDLKFPHHDNEIAQSEAFFDNKQWINYFMHTGHL 380
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 64/102 (62%), Gaps = 5/102 (4%)
Query: 20 PKWSLPSGYD---TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVK 76
P W PS + TG++++N +T+ FI N N + Y CGPTVYD+ H+GHA ++
Sbjct: 7 PAWEKPSNPNAVRTGLRLHNSLTREVDEFIPANGNTVNAYICGPTVYDASHMGHASTYIQ 66
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY 116
D+IRR+L YFH + ++TD+DDKII KA N L E+Y
Sbjct: 67 FDVIRRVLADYFHYDMRWVMNITDVDDKIILKARRNHLFEEY 108
>gi|156547291|ref|XP_001606432.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like [Nasonia
vitripennis]
Length = 735
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 187/353 (52%), Gaps = 51/353 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RR+L YF+ + + ++TDIDDKII +A N L E+Y +A+ + L
Sbjct: 57 GHARSYISFDILRRVLSDYFNFDVVYVMNITDIDDKIIKRARQNHLYENY--LAENHSLD 114
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGP------VLTKCDEFRDELLALGVQIKDQ----K 251
I K V + + K D +L + E E L + V+ +Q +
Sbjct: 115 QILS--DAKSVMQTFENTVKTTTDPDKRTMYERMLIRVKE-SIEKLEVAVKSNNQAQIKE 171
Query: 252 CEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESME 311
C+ + SD ++ + + S+ L+ +E ++ + M+
Sbjct: 172 CQDVLLKESKDPLSD--WLDKKKGDTVTEHSIFSKLSQH-----------WENDFHKDMD 218
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF----PHYF---- 363
V P TRVSE++P I +FI+ ++ AY S+ SVYFDV +F HY+
Sbjct: 219 ALNVWRPNVLTRVSEYVPEIVAFIEKIIANGLAY-ESNGSVYFDVKAFDKSEKHYYAKLV 277
Query: 364 -KLWGRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIE 411
+ +G ++ + + KRS DFALWKS+K GEPW++S WGKGRPGWHIE
Sbjct: 278 PEAYGDTSSLQEGEGDLSVSADRLSEKRSVTDFALWKSSKAGEPWWDSPWGKGRPGWHIE 337
Query: 412 CSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
CS MAS G +D+HTGG+DLKFPHH+NE AQ+ A+ + S WV Y+LH+GHL
Sbjct: 338 CSVMASAICGESLDIHTGGVDLKFPHHDNELAQAEAYFDNSHWVRYFLHSGHL 390
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 67/102 (65%), Gaps = 7/102 (6%)
Query: 20 PKWSLP---SGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVK 76
P WS P SG +K+YN +T+ K F+ Q +N + WY+CGPTVYD+ H+GHA +
Sbjct: 7 PSWSPPECKSG--PPLKLYNSLTRQKEEFVPQYRNRVLWYSCGPTVYDASHMGHARSYIS 64
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY 116
DI+RR+L YF+ + + ++TDIDDKII +A N L E+Y
Sbjct: 65 FDILRRVLSDYFNFDVVYVMNITDIDDKIIKRARQNHLYENY 106
>gi|296817003|ref|XP_002848838.1| cysteinyl-tRNA synthetase [Arthroderma otae CBS 113480]
gi|238839291|gb|EEQ28953.1| cysteinyl-tRNA synthetase [Arthroderma otae CBS 113480]
Length = 804
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/389 (33%), Positives = 191/389 (49%), Gaps = 70/389 (17%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V DI+RRIL YF I ++TD+DDKII T ++ L
Sbjct: 65 GHARNYVSADIVRRILRDYFKFDVNYIMNITDVDDKII-----------TRGRQQHLYRQ 113
Query: 204 FKILHQKVVRKLAIDLKKAKVDSG--------PVLTKCDEFRDELLALGVQIKDQK---C 252
F H + ++L +D KA ++ P T E +D + + D K
Sbjct: 114 FSAEHPSIDQEL-LDTTKAAYEAYITKNLPLLPSSTPAQELKDTAEKVYAAVLDGKPLEG 172
Query: 253 EATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRT-------VVFEFLFNFR---- 301
+ + KV +S + + + G + + T +++ +L +
Sbjct: 173 NSKPGEPEAKVKMYIKTLSAAAEALTVASTPGGSIPVATFYNKTQDILYPYLDTLKGSSI 232
Query: 302 --------------YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIG 347
YE + + + VL P TRV+EF+P I SF++ +++ K Y+
Sbjct: 233 QGSDHSIFTLLTKEYEDRFMQDVRDLNVLDPDEITRVTEFMPEIVSFVERIIEHKFGYVT 292
Query: 348 SDHSVYFDVDSFP----HYFKL--WGRNENITQ----------HAVKRSPFDFALWKSAK 391
D SVYFD++SF Y +L W RN+ Q A K+S DFALWK++K
Sbjct: 293 PDGSVYFDIESFEAAGNSYARLEPWNRNDANLQSEGEGALSNKQAEKKSAADFALWKASK 352
Query: 392 PGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQ 451
GEP + S WG GRPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS A+ +
Sbjct: 353 AGEPSWPSPWGNGRPGWHIECSAMASARLGKQMDIHSGGIDLAFPHHDNEIAQSEAYWSP 412
Query: 452 S----QWVNYWLHTGHL--RGTDGTRRLR 474
+ QWVNY++H GHL +G+ ++ L+
Sbjct: 413 TCSHVQWVNYFIHMGHLSIQGSKMSKSLK 441
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Query: 14 ATSCESPKWSLPSGYDT------GIKIYNPITKTKVPFIIQNKNHLK--WYACGPTVYDS 65
A E P W P+ + +KI+N +T++K PF+ + K WYACGPTVYD
Sbjct: 2 AAPREQPPWQQPTPHHELKRELPPLKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDD 61
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
H+GHA V DI+RRIL YF I ++TD+DDKII +
Sbjct: 62 AHLGHARNYVSADIVRRILRDYFKFDVNYIMNITDVDDKIITRG 105
>gi|50291223|ref|XP_448044.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527355|emb|CAG60995.1| unnamed protein product [Candida glabrata]
Length = 788
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/373 (34%), Positives = 187/373 (50%), Gaps = 40/373 (10%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY-KTVAKRYFL 200
GHA V +DI RR++++YF + +VTDIDDKII +A N L E++ K L
Sbjct: 77 GHARNYVSIDINRRLIQNYFGYDIQFVQNVTDIDDKIIIRARHNYLFEEFVKQNDSETPL 136
Query: 201 RLIFKILHQK-------VVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALG-----VQIK 248
+I+ + + + LA L ++ L ++ E L + +
Sbjct: 137 NESDEIVKKANDATISYINKNLADVLGSSQESVNTFLVAAEKVNHEEAKLKDPKFPMHMT 196
Query: 249 DQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFE 308
+ + K+ + F + L+ + LG +F L + +E +Y
Sbjct: 197 SVQNAISALSNVSKLPRRKFFDGVKDVLVPVLDKELGSTINDPEIFRKLPAY-WEKQYDS 255
Query: 309 SMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK---- 364
M V+PP TRVSE++P I SF++ +++ AY +D SVYFD F K
Sbjct: 256 DMAALNVIPPNVTTRVSEYVPEIVSFVEDIINNGYAYATNDGSVYFDTVRFDQNEKHDYA 315
Query: 365 ---LWGRNE------------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWH 409
W + + N + K+S DFALWK +KPGEP ++S WGKGRPGWH
Sbjct: 316 KCQPWNKGKLDLINDGEGSLSNFDNNG-KKSANDFALWKGSKPGEPAWDSPWGKGRPGWH 374
Query: 410 IECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGT 467
IECS MAS G +D+H+GGIDL FPHH+NE AQS A + QW+NY+LHTGHL G
Sbjct: 375 IECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQSEAKFDNKQWINYFLHTGHLHIEGQ 434
Query: 468 DGTRRLRAARFIT 480
++ L+ FIT
Sbjct: 435 KMSKSLK--NFIT 445
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 69/114 (60%), Gaps = 7/114 (6%)
Query: 2 SILSQSSLALSYATSCESPKWSLPSGYDTG-----IKIYNPITKTKVPFIIQNKNH-LKW 55
S+L ++ ++ + + + PKW P+ +K+YN +T++K F + + W
Sbjct: 5 SVLKRTVMSAANSKVVQ-PKWINPAQCSERTQAPVLKLYNSLTRSKEVFAPSSGTKTVSW 63
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
Y+CGPTVYD+ H+GHA V +DI RR++++YF + +VTDIDDKII +A
Sbjct: 64 YSCGPTVYDASHMGHARNYVSIDINRRLIQNYFGYDIQFVQNVTDIDDKIIIRA 117
>gi|327259955|ref|XP_003214801.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like [Anolis
carolinensis]
Length = 826
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/354 (37%), Positives = 173/354 (48%), Gaps = 52/354 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RR+L+ YF ++TDIDDKII +A N L E Y T K +
Sbjct: 144 GHARSYISFDILRRVLKDYFKYDVFYCMNITDIDDKIIKRARQNHLFEQY-TEKKPSATQ 202
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRD-------ELLALGVQIKDQKCEA 254
L L+ ++ S P K E D E + V+ + E
Sbjct: 203 L----------------LEDVQIASQPFSAKLQETSDPDKKQMLERIQAAVKTAVESLEN 246
Query: 255 TWQFK--DGKVFSDRVFISLPLYLILIQ--VSLLGPLTLRTVVFEFLFNFRYELEYFESM 310
+ K +G V + IL + + G +F L F +E EY M
Sbjct: 247 VLKKKLSEGDVNRHAEVLLQEAKDILAEWLDAKFGSQVTDNSIFSKLPKF-WEEEYHNDM 305
Query: 311 EKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL 365
VLPP TRVSE+IP I F+Q ++D Y+ S+ SVYFD F Y KL
Sbjct: 306 AALNVLPPDVLTRVSEYIPEIVDFVQKIVDNGYGYV-SNGSVYFDTVKFDASEKHSYAKL 364
Query: 366 W----GRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHI 410
G + + + + K SP DFALWKS+K GEP +ES WGKGRPGWHI
Sbjct: 365 VPEAVGDQKALQEGEGDLSVSADRLSEKHSPNDFALWKSSKLGEPSWESPWGKGRPGWHI 424
Query: 411 ECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
ECSAMA G +D+H GG DL+FPHH+NE AQS A+ + WV Y+LHTGHL
Sbjct: 425 ECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAYFDNDHWVRYFLHTGHL 478
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Query: 20 PKWSLP-SGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P WS P + +YN +T+ K F QN N + WY CGPTVYD+ H+GHA + D
Sbjct: 94 PAWSPPKESSQPKLCLYNSLTRNKDKFQPQNGNKVTWYCCGPTVYDASHMGHARSYISFD 153
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY 116
I+RR+L+ YF ++TDIDDKII +A N L E Y
Sbjct: 154 ILRRVLKDYFKYDVFYCMNITDIDDKIIKRARQNHLFEQY 193
>gi|289739575|gb|ADD18535.1| cysteinyl-tRNA synthetase [Glossina morsitans morsitans]
Length = 537
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 110/169 (65%), Gaps = 7/169 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E++ ++K VL P RV++ IP I ++I+ ++ + AY+G D+SVY DV S +
Sbjct: 129 YEAEFWTDLKKLNVLEPNVKARVTDHIPKIINYIERIIKKRMAYVGDDNSVYMDVKSVKN 188
Query: 362 YFKLWG------RNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAM 415
Y KL E + +K+SP DFALWK+ K G P + S WG GRP WHIECS +
Sbjct: 189 YGKLQNISLDEQNAEEQLEKGIKKSPMDFALWKARKTG-PTFPSPWGDGRPAWHIECSTL 247
Query: 416 ASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
A FG V +H GGIDL+FPHHENEE QSC +H+ QWVNYWLHTGHL
Sbjct: 248 AGMIFGDNVHIHAGGIDLRFPHHENEECQSCVYHDNKQWVNYWLHTGHL 296
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 75/102 (73%)
Query: 22 WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
W P G +T ++IYN + K VPFI+ N+ + WY CGPTVYDS H+GHA C VKLDI++
Sbjct: 28 WLKPDGIETDLRIYNCVAKRNVPFILNNQYFVTWYTCGPTVYDSCHLGHASCYVKLDILQ 87
Query: 82 RILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
RIL H+F+++ + ++TDIDDKII K+ +L +D++ VA+ Y
Sbjct: 88 RILRHHFNLNIVSAMNITDIDDKIIAKSENLGKDWRDVARFY 129
>gi|242792877|ref|XP_002482046.1| cysteinyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
gi|218718634|gb|EED18054.1| cysteinyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
Length = 828
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/376 (34%), Positives = 185/376 (49%), Gaps = 46/376 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA------NSLKEDYKTVAKR 197
GHA V DIIRRIL YF + ++TD+DDKII + N + T+
Sbjct: 93 GHARNYVTTDIIRRILRDYFKFDVHFVMNITDVDDKIILRGRQQYLFNKFVSAHPTIDAT 152
Query: 198 YF--LRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEAT 255
+ FK K +R L +L K S L + D++ +A
Sbjct: 153 VLDTAKAAFKTYLTKNLRLLNPELSPLKFQSEVEKVYATLLNGGPLPGNEKPGDEEAKAK 212
Query: 256 WQFKD----GKVFSDRVFISLPLYLIL------IQVSLLGPLTLRTV------VFEFLFN 299
K KV ++ + L I + L L T+ +F L
Sbjct: 213 MHIKTLSSAAKVIAEAEVVPPALSETFYTEAQDIFLPYLDQLEGSTIDADDHSIFTKLTK 272
Query: 300 FRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF 359
+YE + + + VL P TRV+E+ P I F++ +++ K AY+ SD SVYFD+ +F
Sbjct: 273 -KYEGRFMKDLRDLNVLDPDELTRVTEYGPQIAQFVERIVENKFAYVTSDGSVYFDIKAF 331
Query: 360 PH----YFKL--WGRNEN----------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGK 403
Y +L W +++ ++ K S DFALWK++KPGEP + S WGK
Sbjct: 332 EEAGFPYARLEPWSKSDGKLIAEGEGTLTSKTTEKHSLSDFALWKASKPGEPSWSSQWGK 391
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF---HNQSQWVNYWLH 460
GRPGWHIECSAMAS G +D+H+GGIDL FPHH+NE AQS A+ H QW+NY+LH
Sbjct: 392 GRPGWHIECSAMASDRLGKTIDIHSGGIDLAFPHHDNELAQSEAYWNTHTHDQWINYFLH 451
Query: 461 TGHL--RGTDGTRRLR 474
GHL +G+ ++ L+
Sbjct: 452 MGHLSIQGSKMSKSLK 467
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 66/104 (63%), Gaps = 6/104 (5%)
Query: 9 LALSYATSCESPKWSLPSGY-DTGI---KIYNPITKTKVPFIIQNKNHLK--WYACGPTV 62
L+ + AT+ + P W P + DT + KIYN +TK+KVPF+ + N K WYACGPTV
Sbjct: 27 LSRTMATARQQPAWQQPPSHPDTKLPTLKIYNSLTKSKVPFVPIDPNGRKVTWYACGPTV 86
Query: 63 YDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII 106
YD H+GHA V DIIRRIL YF + ++TD+DDKII
Sbjct: 87 YDDSHLGHARNYVTTDIIRRILRDYFKFDVHFVMNITDVDDKII 130
>gi|270001919|gb|EEZ98366.1| hypothetical protein TcasGA2_TC000823 [Tribolium castaneum]
Length = 511
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 121/182 (66%), Gaps = 11/182 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
++E E+++ ++ V P RV+E + I++FI+ L+D +AY D+SVYFDV ++
Sbjct: 116 KFEAEFWKDLDALDVRRPDCVLRVTENMDVIKNFIRELIDKGKAYKAGDNSVYFDVGAYD 175
Query: 361 HYFKLWGRNENITQHA-VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHF 419
+Y KL E+ + + K+S DFALWK+AKPGE + S WGKGRPGWHIECSA+A H
Sbjct: 176 NYAKLQNIGEDAPEPSKFKKSKMDFALWKAAKPGEISWVSEWGKGRPGWHIECSALAGHV 235
Query: 420 F----------GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDG 469
G ++D+H GGIDL+FPHHENEEAQSCA + + QWVNYWLHTGHL D
Sbjct: 236 LVPTIRNNTSLGPEIDIHAGGIDLRFPHHENEEAQSCARYCRPQWVNYWLHTGHLHLKDS 295
Query: 470 TR 471
+
Sbjct: 296 QK 297
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 82/106 (77%)
Query: 18 ESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
S +W P+G+DTGIK++N +TKVP I++NKN + WY CGPTVYDS HIGHA C VKL
Sbjct: 12 NSHRWVKPNGHDTGIKVFNCTARTKVPLIVKNKNLVTWYTCGPTVYDSSHIGHASCFVKL 71
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
DII+R+L HYF+++ + + ++TDIDDKII +AN+ K K +AK++
Sbjct: 72 DIIQRLLRHYFNLNVVTVMNITDIDDKIIARANTAKVPPKELAKKF 117
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 43/55 (78%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA C VKLDII+R+L HYF+++ + + ++TDIDDKII +AN+ K K +AK++
Sbjct: 63 GHASCFVKLDIIQRLLRHYFNLNVVTVMNITDIDDKIIARANTAKVPPKELAKKF 117
>gi|256087602|ref|XP_002579955.1| cysteinyl-tRNA synthetase [Schistosoma mansoni]
gi|353229274|emb|CCD75445.1| putative cysteinyl-tRNA synthetase [Schistosoma mansoni]
Length = 814
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 180/345 (52%), Gaps = 46/345 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA V D+IRR+L YF+ + ++TDIDDKII +A N L DY+ +
Sbjct: 61 GHARTYVAFDVIRRVLMDYFNFKVTYVLNITDIDDKIIKRARQNHLISDYQ-LKNPDLAT 119
Query: 202 LIFKILH--QKVVRKLAIDL---KKAKVDSGPVLTKCDEFRDELLALGVQIK-DQKCEAT 255
+I I Q++ K+ + KKA ++S D L +L + D++ A
Sbjct: 120 VIGDITKGIQRIKSKIPSETDPDKKAHLNSEV---------DRLTSLLSTVPLDEENPAN 170
Query: 256 WQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGV 315
+ + + D + +L + G +FE L +E EY ME +
Sbjct: 171 YLILNAR---DAIADTLD--------AAYGASISDHQIFEALAR-HFEKEYLVDMECLNI 218
Query: 316 LPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF---PHYF--------- 363
+PP+ RV+E+I I +++ ++D AY+ SVYFD + F P +F
Sbjct: 219 IPPSVLVRVTEYIDPIIKYVKQIIDNGFAYVVPSGSVYFDTNRFASSPMHFYAKLVPTAY 278
Query: 364 ----KLWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHF 419
+L + K+S DFALWK++KPGEP + S WGKGRPGWHIECS MAS
Sbjct: 279 GDTSQLESGEGELCITGEKKSSNDFALWKASKPGEPSWPSPWGKGRPGWHIECSVMASDI 338
Query: 420 FGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+H+GG+DLKFPHH+NE AQS A+ S WVNY+LH+GHL
Sbjct: 339 LGDTLDIHSGGVDLKFPHHDNELAQSEAYFGHSHWVNYFLHSGHL 383
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 7/105 (6%)
Query: 20 PKWSLP-----SGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCN 74
PKW P +G + +YN +T K FI Q+ H+KWY CGPTVYD H+GHA
Sbjct: 7 PKWVTPVQNVQNGQLPNLYLYNSLTSQKDLFIPQDGRHVKWYTCGPTVYDVSHLGHARTY 66
Query: 75 VKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYK 117
V D+IRR+L YF+ + ++TDIDDKII +A N L DY+
Sbjct: 67 VAFDVIRRVLMDYFNFKVTYVLNITDIDDKIIKRARQNHLISDYQ 111
>gi|380092529|emb|CCC09806.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 856
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 141/394 (35%), Positives = 186/394 (47%), Gaps = 64/394 (16%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRIL HYF + + TD+DDKII KA + E K
Sbjct: 91 GHARNYVSTDIIRRILMHYFDYKVNFVMNYTDVDDKIIIKARRKRLLELEKEKPYTPEQI 150
Query: 200 LRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDE-----LLALGVQIKDQKC-- 252
LIFK Q + L + A D+ P+ K + R E +LA G + + K
Sbjct: 151 RDLIFKAF-QAYTKNLPL---LAPEDAAPLDEKNYQERKEAGYGVVLAGGPLVPETKPGD 206
Query: 253 -------------EATWQFKDGKVFSDRVFISLP----LYLILIQVSLLGPLTLRTVVFE 295
A K+G + LP LY I S T T E
Sbjct: 207 AEAKVKMHLNNMDAAAEALKNGSGLDAAEDVLLPYLDSLYKETIDTSDQTIFTNLTKTME 266
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFD 355
F + ME VLPP TRV+E++P I +F++ ++ AY +D SVYFD
Sbjct: 267 QAFA--------DDMEALNVLPPDVITRVTEYVPQIVAFVEQIIQKGFAY-EADGSVYFD 317
Query: 356 VDSFPHYFKLWGR------NENITQH----------AVKRSPFDFALWKSAKPGEPWYES 399
+ +F + R N+ Q K+ DFALWK +KPGEP++ S
Sbjct: 318 IGAFEKAGNTYARLRPESKNDTALQEEGEGSLSTALGGKKRSGDFALWKKSKPGEPYWPS 377
Query: 400 AWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCA-FHN----QSQW 454
WG GRPGWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A FH+ + W
Sbjct: 378 PWGAGRPGWHIECSVMASDKLGEQMDIHSGGIDLAFPHHDNELAQSEAYFHDCCKGEHTW 437
Query: 455 VNYWLHTGHLR--GTDGTRRLRAARFITNLSGST 486
V Y+LH GHL G+ ++ L+ + I + ST
Sbjct: 438 VKYFLHMGHLSIAGSKMSKSLKNFQTIQDALAST 471
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 43 VPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDID 102
+PF+ + + + WYACGPTVYD H+GHA V DIIRRIL HYF + + TD+D
Sbjct: 65 IPFVPREEGAISWYACGPTVYDLSHLGHARNYVSTDIIRRILMHYFDYKVNFVMNYTDVD 124
Query: 103 DKIINKANSLK----EDYKTVAKRYFLPLIFKILH 133
DKII KA + E K LIFK
Sbjct: 125 DKIIIKARRKRLLELEKEKPYTPEQIRDLIFKAFQ 159
>gi|256087600|ref|XP_002579954.1| cysteinyl-tRNA synthetase [Schistosoma mansoni]
gi|353229275|emb|CCD75446.1| putative cysteinyl-tRNA synthetase [Schistosoma mansoni]
Length = 843
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 180/345 (52%), Gaps = 46/345 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA V D+IRR+L YF+ + ++TDIDDKII +A N L DY+ +
Sbjct: 90 GHARTYVAFDVIRRVLMDYFNFKVTYVLNITDIDDKIIKRARQNHLISDYQ-LKNPDLAT 148
Query: 202 LIFKILH--QKVVRKLAIDL---KKAKVDSGPVLTKCDEFRDELLALGVQIK-DQKCEAT 255
+I I Q++ K+ + KKA ++S D L +L + D++ A
Sbjct: 149 VIGDITKGIQRIKSKIPSETDPDKKAHLNSEV---------DRLTSLLSTVPLDEENPAN 199
Query: 256 WQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGV 315
+ + + D + +L + G +FE L +E EY ME +
Sbjct: 200 YLILNAR---DAIADTLD--------AAYGASISDHQIFEALAR-HFEKEYLVDMECLNI 247
Query: 316 LPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF---PHYF--------- 363
+PP+ RV+E+I I +++ ++D AY+ SVYFD + F P +F
Sbjct: 248 IPPSVLVRVTEYIDPIIKYVKQIIDNGFAYVVPSGSVYFDTNRFASSPMHFYAKLVPTAY 307
Query: 364 ----KLWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHF 419
+L + K+S DFALWK++KPGEP + S WGKGRPGWHIECS MAS
Sbjct: 308 GDTSQLESGEGELCITGEKKSSNDFALWKASKPGEPSWPSPWGKGRPGWHIECSVMASDI 367
Query: 420 FGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+H+GG+DLKFPHH+NE AQS A+ S WVNY+LH+GHL
Sbjct: 368 LGDTLDIHSGGVDLKFPHHDNELAQSEAYFGHSHWVNYFLHSGHL 412
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 68/120 (56%), Gaps = 10/120 (8%)
Query: 8 SLALSYATSCE---SPKWSLP-----SGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACG 59
SL L Y E PKW P +G + +YN +T K FI Q+ H+KWY CG
Sbjct: 21 SLLLPYYRKMEKRTQPKWVTPVQNVQNGQLPNLYLYNSLTSQKDLFIPQDGRHVKWYTCG 80
Query: 60 PTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYK 117
PTVYD H+GHA V D+IRR+L YF+ + ++TDIDDKII +A N L DY+
Sbjct: 81 PTVYDVSHLGHARTYVAFDVIRRVLMDYFNFKVTYVLNITDIDDKIIKRARQNHLISDYQ 140
>gi|302657026|ref|XP_003020246.1| hypothetical protein TRV_05685 [Trichophyton verrucosum HKI 0517]
gi|291184058|gb|EFE39628.1| hypothetical protein TRV_05685 [Trichophyton verrucosum HKI 0517]
Length = 804
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 191/389 (49%), Gaps = 70/389 (17%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V DI+RRIL YF I ++TD+DDKII T ++ L
Sbjct: 65 GHARNYVSADIVRRILRDYFKFDVKYIMNITDVDDKII-----------TRGRQQHLYNQ 113
Query: 204 FKILHQKVVRKLAIDLKKAKVDS--------GPVLTKCDEFRDELLALGVQIKDQK---C 252
F H + ++L +D KA ++ P T E +D + + D K
Sbjct: 114 FSAEHPSIDQEL-LDTAKAAYEAYITKNLPLVPASTPAHELKDTAEKVYAAVLDGKPLEG 172
Query: 253 EATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRT-------VVFEFLFNFR---- 301
+ + KV +S + + + G + + T +++ +L +
Sbjct: 173 NSKPGEPEAKVKMYIKTLSTAAEALTVASTPGGSIPVATFYDKTQDILYPYLDTLKGASI 232
Query: 302 --------------YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIG 347
YE + + + VL P TRV+EF+P I SF++ +++ K Y+
Sbjct: 233 QGSDHSIFTRLTKEYEDRFMQDVRDLNVLDPDEITRVTEFMPEIVSFVERIIEHKFGYVT 292
Query: 348 SDHSVYFDVDSFP----HYFKL--WGRNENITQ----------HAVKRSPFDFALWKSAK 391
D SVYFD+++F Y +L W RN+ Q A K+S DFALWK++K
Sbjct: 293 PDGSVYFDIENFEAAGNSYARLEPWNRNDANRQSEGEGSLSNKQAEKKSSADFALWKASK 352
Query: 392 PGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQ 451
GEP + S WG GRPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS A+ +
Sbjct: 353 AGEPSWPSPWGNGRPGWHIECSAMASSRLGKQMDIHSGGIDLAFPHHDNEIAQSEAYWSS 412
Query: 452 S----QWVNYWLHTGHL--RGTDGTRRLR 474
+ QWVNY++H GHL +G+ ++ L+
Sbjct: 413 TCSHVQWVNYFIHMGHLSIQGSKMSKSLK 441
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Query: 14 ATSCESPKWSLPSGYD------TGIKIYNPITKTKVPFIIQNKNHLK--WYACGPTVYDS 65
A E P W P+ + +KI+N +T++K PF+ + K WYACGPTVYD
Sbjct: 2 AAPREQPPWQQPTPHQGLQRELPPLKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDD 61
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
H+GHA V DI+RRIL YF I ++TD+DDKII +
Sbjct: 62 AHLGHARNYVSADIVRRILRDYFKFDVKYIMNITDVDDKIITRG 105
>gi|336276582|ref|XP_003353044.1| hypothetical protein SMAC_03362 [Sordaria macrospora k-hell]
Length = 807
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 141/394 (35%), Positives = 186/394 (47%), Gaps = 64/394 (16%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRIL HYF + + TD+DDKII KA + E K
Sbjct: 42 GHARNYVSTDIIRRILMHYFDYKVNFVMNYTDVDDKIIIKARRKRLLELEKEKPYTPEQI 101
Query: 200 LRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDE-----LLALGVQIKDQKC-- 252
LIFK Q + L + A D+ P+ K + R E +LA G + + K
Sbjct: 102 RDLIFKAF-QAYTKNLPL---LAPEDAAPLDEKNYQERKEAGYGVVLAGGPLVPETKPGD 157
Query: 253 -------------EATWQFKDGKVFSDRVFISLP----LYLILIQVSLLGPLTLRTVVFE 295
A K+G + LP LY I S T T E
Sbjct: 158 AEAKVKMHLNNMDAAAEALKNGSGLDAAEDVLLPYLDSLYKETIDTSDQTIFTNLTKTME 217
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFD 355
F + ME VLPP TRV+E++P I +F++ ++ AY +D SVYFD
Sbjct: 218 QAFA--------DDMEALNVLPPDVITRVTEYVPQIVAFVEQIIQKGFAY-EADGSVYFD 268
Query: 356 VDSFPHYFKLWGR------NENITQH----------AVKRSPFDFALWKSAKPGEPWYES 399
+ +F + R N+ Q K+ DFALWK +KPGEP++ S
Sbjct: 269 IGAFEKAGNTYARLRPESKNDTALQEEGEGSLSTALGGKKRSGDFALWKKSKPGEPYWPS 328
Query: 400 AWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCA-FHN----QSQW 454
WG GRPGWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A FH+ + W
Sbjct: 329 PWGAGRPGWHIECSVMASDKLGEQMDIHSGGIDLAFPHHDNELAQSEAYFHDCCKGEHTW 388
Query: 455 VNYWLHTGHLR--GTDGTRRLRAARFITNLSGST 486
V Y+LH GHL G+ ++ L+ + I + ST
Sbjct: 389 VKYFLHMGHLSIAGSKMSKSLKNFQTIQDALAST 422
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 43 VPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDID 102
+PF+ + + + WYACGPTVYD H+GHA V DIIRRIL HYF + + TD+D
Sbjct: 16 IPFVPREEGAISWYACGPTVYDLSHLGHARNYVSTDIIRRILMHYFDYKVNFVMNYTDVD 75
Query: 103 DKIINKANSLK----EDYKTVAKRYFLPLIFKILH 133
DKII KA + E K LIFK
Sbjct: 76 DKIIIKARRKRLLELEKEKPYTPEQIRDLIFKAFQ 110
>gi|115433550|ref|XP_001216912.1| hypothetical protein ATEG_08291 [Aspergillus terreus NIH2624]
gi|114189764|gb|EAU31464.1| hypothetical protein ATEG_08291 [Aspergillus terreus NIH2624]
Length = 811
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 183/366 (50%), Gaps = 48/366 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII--NKANSLKEDYKT-------- 193
GHA V DI+RRIL+ YF + ++TDIDDKII + L E +K
Sbjct: 64 GHARNYVSTDILRRILKDYFGYQVKYVMNITDIDDKIILRGRQQYLLEQFKQKQSGSLDG 123
Query: 194 -----------VAKRYFLRLIFKILHQKVV-RKLAIDLKKA--KVDSGPVLTKCDEFRDE 239
A ++++ +L V A + KA ++ G L D
Sbjct: 124 PVPEPVLAETKAAVEFYIKKNLPLLSADVTPETYAAESDKAYKRIFEGKALEGDAPPGDT 183
Query: 240 LLALGVQIKDQKCEATWQFKDGKV--FSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFL 297
L V ++ A GK+ F + L YL + S + + +F L
Sbjct: 184 EAKLKVHLRTVASAAEALQAPGKLSEFYGKTEDVLLPYLDSLHGSSID--SNDHSIFTRL 241
Query: 298 FNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVD 357
++E +FE M VL P TRV+E++P + SFI+ ++ + AY D SVYFD++
Sbjct: 242 TE-KFEKRFFEDMNSLNVLYPDVLTRVTEYVPQVVSFIEKVIASGFAYATPDGSVYFDIE 300
Query: 358 SFP----HYFKL--WGRNEN----------ITQHAVKRSPFDFALWKSAKPGEPWYESAW 401
+F +Y +L W RN+ + VKRS DFALWK++KPGEP + S W
Sbjct: 301 AFEKAGHNYARLEPWNRNDKSLLADGEGSLTNKTTVKRSESDFALWKASKPGEPSWPSPW 360
Query: 402 GKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS---QWVNYW 458
GRPGWHIECS MAS G +D+H+GG DL+FPHH+NE AQS A+ + QWVNY+
Sbjct: 361 APGRPGWHIECSVMASDVLGKAIDIHSGGADLRFPHHDNELAQSEAYWSTGPRVQWVNYF 420
Query: 459 LHTGHL 464
+HTGHL
Sbjct: 421 IHTGHL 426
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Query: 14 ATSCESPKWSLPSGYDT----GIKIYNPITKTK---VPFIIQNKNHLKWYACGPTVYDSP 66
+T+ E P W P +KIYN +T+ K VP + K WY CGPTVYD
Sbjct: 3 STTREQPPWIPPQRRPNVQLPPLKIYNSLTRRKDDYVPIDPEGK-ATTWYTCGPTVYDDA 61
Query: 67 HIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII 106
H+GHA V DI+RRIL+ YF + ++TDIDDKII
Sbjct: 62 HMGHARNYVSTDILRRILKDYFGYQVKYVMNITDIDDKII 101
>gi|154285550|ref|XP_001543570.1| hypothetical protein HCAG_00616 [Ajellomyces capsulatus NAm1]
gi|150407211|gb|EDN02752.1| hypothetical protein HCAG_00616 [Ajellomyces capsulatus NAm1]
Length = 665
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 186/363 (51%), Gaps = 45/363 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V DI+RRI+ YF I ++TD+DDKI+ A + FL
Sbjct: 65 GHARNYVTNDILRRIMRDYFKFDVEFIMNITDVDDKIVRSAFAA-----------FLERN 113
Query: 204 FKILHQKVV-RKLAIDLKK--AKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFK- 259
+L + + + +K A + +G L ++ DE L ++IK A K
Sbjct: 114 LPLLEAGLAPERYGEEAEKVYAAILNGAALDGSEKPGDEEAKLKMKIKTASSAANALTKV 173
Query: 260 ---DGKVFSDRVFISLPLYLILIQVSLLGPLTLR---TVVFEFLFNFRYELEYFESMEKF 313
+ S+ + + L+ S+ G ++R +F L +YE + + +
Sbjct: 174 SCAKESILSETFYNDVQDVLLEYLDSIHGS-SIRGEDRTIFTKLTK-KYEDRFMQDVRDL 231
Query: 314 GVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENIT 373
VL P TRV+E++P I SF++ ++ + Y+ SD SVYFD+ +F + R E
Sbjct: 232 NVLDPDTVTRVTEYMPEIVSFVERIVKHRFGYVTSDGSVYFDIGAFEAAGNSYARLEPWN 291
Query: 374 QHAVK----------------RSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
+H K RS DFALWK++K GEP + S WG GRPGWHIECSAMAS
Sbjct: 292 RHDTKLHAEGEGALTKKTMEKRSAADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMAS 351
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS----QWVNYWLHTGHL--RGTDGTR 471
G Q+D+H+GGIDL FPHH+NE AQS A+ +++ WVNY+LH GHL +G+ ++
Sbjct: 352 AKLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHETCAHDHWVNYFLHMGHLSIQGSKMSK 411
Query: 472 RLR 474
L+
Sbjct: 412 SLK 414
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 8/104 (7%)
Query: 14 ATSCESPKWSLPSGYDTG------IKIYNPITKTKVPFIIQNK--NHLKWYACGPTVYDS 65
+T+ + P W+ P + +KIYN +T++KVPF+ + + WYACGPTVYD
Sbjct: 2 STARQQPPWNQPQLHPESASRLPPLKIYNSLTRSKVPFVPLDPIGRKVTWYACGPTVYDD 61
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
H+GHA V DI+RRI+ YF I ++TD+DDKI+ A
Sbjct: 62 AHLGHARNYVTNDILRRIMRDYFKFDVEFIMNITDVDDKIVRSA 105
>gi|58263374|ref|XP_569097.1| cysteine-tRNA ligase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134108600|ref|XP_776953.1| hypothetical protein CNBB4810 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259636|gb|EAL22306.1| hypothetical protein CNBB4810 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223747|gb|AAW41790.1| cysteine-tRNA ligase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 785
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/380 (36%), Positives = 185/380 (48%), Gaps = 69/380 (18%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA-NSLKEDYKTVAKRYFLRL 202
GHA + DI+RRIL YF+ + +VTDIDDKII +A S D
Sbjct: 62 GHARNYLTQDIVRRILRDYFNYDVNFVMNVTDIDDKIILRARESYLLDQAISTNLALTPE 121
Query: 203 IFKILHQKVVRKLAIDLKK--AKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKD 260
+ + + LA LK A ++ P T E+L L +Q KDQ EA W K+
Sbjct: 122 LISDVEAAFTKYLAKPLKSLTAPLEHSPNATSF-----EILDLLLQ-KDQ-SEAQWA-KE 173
Query: 261 GKVFSDRVFISLPLY--------------------------LILIQVSLLGP-------- 286
+ ++ + L L+ +LGP
Sbjct: 174 AREREEKFGMYLASLSKARDAYNAAQQRVGKPEGEGQAVKDLVEGATDVLGPYLGEKLGH 233
Query: 287 -LTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY 345
+ V L ++ +E +F M + VLPP TRVSE++P I SF+Q ++D AY
Sbjct: 234 TIADPIAVCRRLASY-WENAFFTDMARLRVLPPDTITRVSEYVPEIVSFVQRIVDNGFAY 292
Query: 346 IGSDHSVYFDVDSFP---------HYFKLWGRNEN-----------ITQHAVKRSPFDFA 385
G SV+FDVD F Y KL ++ +T KR P DFA
Sbjct: 293 EGG-GSVWFDVDKFEGAEGDGFRHEYAKLQPSSKGNKKLLDEGEGALTGSQGKRRPADFA 351
Query: 386 LWKS-AKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQ 444
LWK+ +KPGEP + S WG+GRPGWHIECS MAS G +D+H+GG+DL FPHH+NE AQ
Sbjct: 352 LWKAKSKPGEPAWPSPWGEGRPGWHIECSVMASAILGSGMDIHSGGVDLMFPHHDNELAQ 411
Query: 445 SCAFHNQSQWVNYWLHTGHL 464
+ A+H QWVNY+LHTGHL
Sbjct: 412 AEAYHGCKQWVNYFLHTGHL 431
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
Query: 15 TSCESPKWSLP--SGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAV 72
++ P W P S + +++YN +T++K F+ N + WY CGPTVYDS H+GHA
Sbjct: 6 SAVTQPTWYSPAKSADEPVLRVYNSLTRSKDVFVPTNGRRVDWYNCGPTVYDSSHMGHAR 65
Query: 73 CNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
+ DI+RRIL YF+ + +VTDIDDKII +A
Sbjct: 66 NYLTQDIVRRILRDYFNYDVNFVMNVTDIDDKIILRA 102
>gi|410912580|ref|XP_003969767.1| PREDICTED: cysteine--tRNA ligase, cytoplasmic-like [Takifugu
rubripes]
Length = 821
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/353 (36%), Positives = 174/353 (49%), Gaps = 50/353 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RRIL YF + ++TDIDDKII +A N L + YK + +
Sbjct: 141 GHARSYISFDILRRILRDYFKYDVLYCMNITDIDDKIIKRARQNFLLDQYKEKQPQS-AQ 199
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDG 261
++ +L + K + A D +L + D A+ V ++ + D
Sbjct: 200 ILQDVLSAREPFKAHL-AATADPDKKQMLERLD------AAVSVALQPVQTAMEGNAADE 252
Query: 262 KVFSDRVFISLPLYLILIQVS----------LLGPLTLRTVVFEFLFNFRYELEYFESME 311
V PL +L++ S G +F L F +E EY + ME
Sbjct: 253 VV--------QPLAQVLLENSKDLLADWLDKQFGSQVTENSIFFNLPKF-WEEEYHKDME 303
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKLW 366
V PP TRVSE++P I F+ ++ Y S+ SVYFD F Y KL
Sbjct: 304 ALNVQPPDVLTRVSEYVPEIVEFVSKVISNGYGY-ESNGSVYFDTSKFDASTQHSYAKLV 362
Query: 367 ----GRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIE 411
G + + + + K+SP DFALWK++KPGEP ++S WGKGRPGWHIE
Sbjct: 363 PEAVGDQKALQEGEGDLSISADRLSEKKSPNDFALWKASKPGEPSWDSPWGKGRPGWHIE 422
Query: 412 CSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
CSAMA G +D+H GG DL+FPHH+NE AQS AF WV Y+LHTGHL
Sbjct: 423 CSAMAGTILGESMDIHGGGFDLRFPHHDNELAQSEAFFENDHWVRYFLHTGHL 475
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 82/157 (52%), Gaps = 9/157 (5%)
Query: 20 PKWSLPSGYDTG-IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P WS P+G D + +YN +T+ K F+ Q N + WY+CGPTVYD+ H+GHA + D
Sbjct: 91 PPWSPPAGTDIPRLHLYNSLTRAKELFVPQQGNKVTWYSCGPTVYDASHMGHARSYISFD 150
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLPLIFKILHQKV 136
I+RRIL YF + ++TDIDDKII +A N L + YK P +IL +
Sbjct: 151 ILRRILRDYFKYDVLYCMNITDIDDKIIKRARQNFLLDQYKEKQ-----PQSAQILQDVL 205
Query: 137 VGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSV 173
P + H D +++LE S+ + V
Sbjct: 206 SAREPFKAHLAATADPD-KKQMLERLDAAVSVALQPV 241
>gi|254584650|ref|XP_002497893.1| ZYRO0F15928p [Zygosaccharomyces rouxii]
gi|186703720|emb|CAQ43411.1| Cysteinyl-tRNA synthetase [Zygosaccharomyces rouxii]
gi|238940786|emb|CAR28960.1| ZYRO0F15928p [Zygosaccharomyces rouxii]
Length = 746
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/343 (36%), Positives = 171/343 (49%), Gaps = 27/343 (7%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII--NKANSLKEDYKTVAKRYFLR 201
GHA V +DI RR+L+ YF + +VTDIDDKII + N L E + R +
Sbjct: 73 GHARNYVSIDINRRLLQDYFGYDVKFVQNVTDIDDKIILRGRQNYLFEQLRLTKSRDEIL 132
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLA---LGVQIKDQKCEATWQF 258
K+ + +K + + + E L+ + + + +
Sbjct: 133 EEVKLASLEYTKKNLPSYQHEGLGEFEKWYAVQDAEKEKLSNAKFPMHVNAVRSALESKN 192
Query: 259 KDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPP 318
+G F ++V + YL I S + VF L F +E +Y + M VL P
Sbjct: 193 YEGDEFYEKVKDVMMPYLDGISGSSVNDRE----VFRKLSAF-WEEKYDDDMRLLNVLAP 247
Query: 319 TRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF----PHYF---KLW----- 366
TRVSE++P I F++ ++D Y D SVYFD F H + + W
Sbjct: 248 DVTTRVSEYVPEIVEFVKRIVDNGYGYATEDGSVYFDTTKFDRDEKHAYAKNQPWNKGDL 307
Query: 367 -----GRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFG 421
G + + KRS DFALWK++K GEP +ES WG+GRPGWHIECS MAS G
Sbjct: 308 ELVSEGEGSLVGSTSGKRSSSDFALWKASKDGEPRWESPWGEGRPGWHIECSVMASDILG 367
Query: 422 GQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
+D+H+GGIDL FPHH+NE AQS A + QWVNY+LHTGHL
Sbjct: 368 SNIDIHSGGIDLAFPHHDNEMAQSEACFDNYQWVNYFLHTGHL 410
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 20 PKWSLPSGYDTG---IKIYNPITKTKVPFI-IQNKNHLKWYACGPTVYDSPHIGHAVCNV 75
PKW P G +K+YN +T+ K F+ I + WY+CGPTVYD+ H+GHA V
Sbjct: 20 PKWMQPEPNGKGKRVLKLYNSLTRNKEVFVPISGGKSVSWYSCGPTVYDAAHMGHARNYV 79
Query: 76 KLDIIRRILEHYFHIHSIVISSVTDIDDKII--NKANSLKEDYKTVAKR 122
+DI RR+L+ YF + +VTDIDDKII + N L E + R
Sbjct: 80 SIDINRRLLQDYFGYDVKFVQNVTDIDDKIILRGRQNYLFEQLRLTKSR 128
>gi|327354912|gb|EGE83769.1| cysteinyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
Length = 844
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 195/379 (51%), Gaps = 50/379 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL-----------KEDYK 192
GHA V DI+RRI+ YF I ++TD+DDKII++ D K
Sbjct: 100 GHARNYVSNDILRRIMRDYFKFDVKFIMNITDVDDKIISRGRQQHFFTEFVYSHPTVDDK 159
Query: 193 TV-----AKRYFLRLIFKILHQKVV-RKLAIDLKK--AKVDSGPVLTKCDEFRDELLALG 244
+ A +L +L + + +++K A + +G L + D+ L
Sbjct: 160 VIEIALSAYSAYLEKKLPLLEAGLAPERYQDEVEKVYATILNGGALDGNGKPGDDEAKLK 219
Query: 245 VQIKDQKCEATWQFK----DGKVFSDRVFISLPLYLILIQVSLLGPLTLR---TVVFEFL 297
+ IK A K + + S+ + + L+ S+ G ++R ++F L
Sbjct: 220 MHIKTASSAANALAKVSSAEESILSESFYNDVKDVLLEYLDSVHGS-SIRGEDRLIFTKL 278
Query: 298 FNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVD 357
+YE + + + VL P TRV+E++P I SF++ ++D K Y+ SD SVYFD+
Sbjct: 279 AK-KYETRFMQDVRDLNVLDPDAITRVTEYMPEIVSFVERIIDHKFGYVTSDGSVYFDIT 337
Query: 358 SFP----HYFKL--WGRNENITQH----------AVKRSPFDFALWKSAKPGEPWYESAW 401
+F Y +L W RN+ Q KRS DFALWK++K GEP + S W
Sbjct: 338 AFEASGNSYARLEPWNRNDTKLQAEGEGALTKKTTEKRSAADFALWKASKAGEPSWPSPW 397
Query: 402 GKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS----QWVNY 457
G GRPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS A+ +++ WVNY
Sbjct: 398 GDGRPGWHIECSAMASAKLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHETCADHHWVNY 457
Query: 458 WLHTGHL--RGTDGTRRLR 474
+LH GHL +G+ ++ L+
Sbjct: 458 FLHMGHLSIQGSKMSKSLK 476
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 65/106 (61%), Gaps = 8/106 (7%)
Query: 12 SYATSCESPKWSLPSGYDTG------IKIYNPITKTKVPFIIQNKNH--LKWYACGPTVY 63
+ +T+ + P W+ P + +KIYN +T++KVPF+ + + + WYACGPTVY
Sbjct: 35 TMSTARQQPPWNQPKPHPESASRLPPLKIYNSLTRSKVPFVPLDPSGRTVTWYACGPTVY 94
Query: 64 DSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
D H+GHA V DI+RRI+ YF I ++TD+DDKII++
Sbjct: 95 DDAHLGHARNYVSNDILRRIMRDYFKFDVKFIMNITDVDDKIISRG 140
>gi|321252445|ref|XP_003192408.1| cysteine-tRNA ligase [Cryptococcus gattii WM276]
gi|317458876|gb|ADV20621.1| Cysteine-tRNA ligase, putative [Cryptococcus gattii WM276]
Length = 785
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 138/375 (36%), Positives = 182/375 (48%), Gaps = 59/375 (15%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS----------------- 186
GHA + DIIRRIL YF+ + +VTDIDDKII +A
Sbjct: 62 GHARNYLTQDIIRRILRDYFNYDVNFVMNVTDIDDKIILRARESYLLDQAISSNPALTPQ 121
Query: 187 LKEDYKTVAKRYFLR----LIFKILHQKVVRKLAI-DLKKAKVDSGPVLTKCDEFRDELL 241
L D + +Y + L + H I DL K S K R+E
Sbjct: 122 LISDVEAAFTKYIAKPLKSLPTPLEHSPNATSFEILDLLLQKDQSEAQWAKEAREREEKF 181
Query: 242 ALGVQIKDQKCEA--TWQFKDGKVFSDRVFISLPLYLILIQVSLLGP---------LTLR 290
+ + + EA + Q K GK + + L+ +LGP +
Sbjct: 182 GMYLTSLSKAREAYNSAQQKVGKPEGEGQAVK---DLVEGAADVLGPYLGEKLGHTIADP 238
Query: 291 TVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDH 350
V L ++ +E +F M + VLPP TRVSE++P I SF+Q ++D AY G
Sbjct: 239 IAVCRRLASY-WENAFFTDMARLRVLPPDTITRVSEYVPEIVSFVQRIVDNGFAYEGG-G 296
Query: 351 SVYFDV--------DSFPHYF-----------KLWGRNEN-ITQHAVKRSPFDFALWKS- 389
SV+FDV D F H + KL E +T KR P DFALWK+
Sbjct: 297 SVWFDVNKFEGAEGDGFRHEYAKLQPSSKGNKKLLDEGEGALTGSQGKRRPADFALWKAK 356
Query: 390 AKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFH 449
+KPGEP + S WG+GRPGWHIECS MAS G +D+H+GG+DL FPHH+NE AQ+ A+H
Sbjct: 357 SKPGEPAWPSPWGEGRPGWHIECSVMASAILGSGMDVHSGGVDLMFPHHDNELAQAEAYH 416
Query: 450 NQSQWVNYWLHTGHL 464
QWVNY+LHTGHL
Sbjct: 417 GCKQWVNYFLHTGHL 431
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 20 PKWSLP--SGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
P W P S + +++YN +T++K F+ N + WY CGPTVYDS H+GHA +
Sbjct: 11 PTWYSPAKSADEPALRVYNSLTRSKDVFVPTNGRRVDWYNCGPTVYDSSHMGHARNYLTQ 70
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
DIIRRIL YF+ + +VTDIDDKII +A
Sbjct: 71 DIIRRILRDYFNYDVNFVMNVTDIDDKIILRA 102
>gi|326469078|gb|EGD93087.1| cysteinyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
Length = 804
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/379 (33%), Positives = 188/379 (49%), Gaps = 50/379 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKAN-------------SLKED 190
GHA V DI+RRIL YF I ++TD+DDKII + S+ ++
Sbjct: 65 GHARNYVSADIVRRILRDYFKFDVKYIMNITDVDDKIITRGRQQHLYDQFSAEHPSIDQE 124
Query: 191 YKTVAKRYFLRLIFKIL---------HQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDEL- 240
AK + I K L H+ ++ A ++ A +D P+ E
Sbjct: 125 LLDTAKAAYEAYIAKNLPLIPVSTPTHE--LKDTAEEVYAAVLDGKPLEGNSKPGEPEAK 182
Query: 241 LALGVQIKDQKCEA-TWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFN 299
+ + ++ EA T G F ++ + L +++ +
Sbjct: 183 VKMYIRTLSVAAEALTMASIPGGSIPVATFYEKTQDILYPHLDTLKGASIQGSDYSIFTR 242
Query: 300 F--RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVD 357
YE + + + VL P TRV+EF+P I SF++ +++ K Y+ D SVYFD++
Sbjct: 243 LTKEYEDRFMQDVRDLNVLDPDEITRVTEFMPEIVSFVERIIEHKFGYVTPDGSVYFDIE 302
Query: 358 SFP----HYFKL--WGRNENITQ----------HAVKRSPFDFALWKSAKPGEPWYESAW 401
+F Y +L W RN+ Q A K+S DFALWK++K GEP + S W
Sbjct: 303 NFEAAGNSYARLEPWNRNDANRQSEGEGSLSNKQAKKKSSADFALWKASKAGEPSWPSPW 362
Query: 402 GKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS----QWVNY 457
G GRPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS A+ + + QWVNY
Sbjct: 363 GNGRPGWHIECSAMASSRLGKQMDIHSGGIDLAFPHHDNEIAQSEAYWSSTCSHVQWVNY 422
Query: 458 WLHTGHL--RGTDGTRRLR 474
++H GHL +G+ ++ L+
Sbjct: 423 FIHMGHLSIQGSKMSKSLK 441
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Query: 14 ATSCESPKWSLPSGYD------TGIKIYNPITKTKVPFIIQNKNHLK--WYACGPTVYDS 65
A E P W P+ + +KI+N +T++K PF+ + K WYACGPTVYD
Sbjct: 2 AAPREQPPWQQPTPHQGLQRELPPLKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDD 61
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
H+GHA V DI+RRIL YF I ++TD+DDKII +
Sbjct: 62 AHLGHARNYVSADIVRRILRDYFKFDVKYIMNITDVDDKIITRG 105
>gi|326920114|ref|XP_003206320.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like [Meleagris
gallopavo]
Length = 748
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/357 (35%), Positives = 173/357 (48%), Gaps = 58/357 (16%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS----------------L 187
GHA + DI+RRIL YF ++TDIDDKII + L
Sbjct: 66 GHARSYISFDILRRILRDYFKFDVFYCMNITDIDDKIIKRTRQNYLFEQYRKNKSTPAQL 125
Query: 188 KEDYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQI 247
ED KT ++ + ++L K R++ ++ A V + D ++ + A
Sbjct: 126 LEDVKTASELFSVKLSETTDPDK--RQMLEKIQNA------VKSAFDPLQEAVQAKLPAE 177
Query: 248 KDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYF 307
+ KC + + SD + S G +F L F +E E+
Sbjct: 178 EISKCHEILLEEARDLLSDWL------------DSRFGSQVTDNSIFSELPKF-WEGEFH 224
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HY 362
+ ME VLPP TRVSE++P I +F++ ++D Y+ S+ SVYFD F Y
Sbjct: 225 KDMEALNVLPPDVLTRVSEYVPEIVAFVKKIVDNGYGYV-SNGSVYFDTVKFASSEKHSY 283
Query: 363 FKLWGR---NENITQHA------------VKRSPFDFALWKSAKPGEPWYESAWGKGRPG 407
KL ++ Q K SP DFALWKS+KPGEP ++S WGKGRPG
Sbjct: 284 AKLVPEAVGDQKALQEGEGDLSISADRLCEKHSPNDFALWKSSKPGEPSWDSPWGKGRPG 343
Query: 408 WHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
WHIECSAMA G +D+H GG DL+FPHH+NE AQS A+ WV Y+LHTGHL
Sbjct: 344 WHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAYFENDNWVRYFLHTGHL 400
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P WS P G + + +YN +T+ K F QN + WY CGPTVYD+ H+GHA + D
Sbjct: 16 PPWSPPEGTKHSRLCLYNSLTRNKEIFQPQNGKKVTWYCCGPTVYDASHMGHARSYISFD 75
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYK 117
I+RRIL YF ++TDIDDKII + N L E Y+
Sbjct: 76 ILRRILRDYFKFDVFYCMNITDIDDKIIKRTRQNYLFEQYR 116
>gi|426197150|gb|EKV47077.1| hypothetical protein AGABI2DRAFT_220881 [Agaricus bisporus var.
bisporus H97]
Length = 777
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/364 (35%), Positives = 181/364 (49%), Gaps = 44/364 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA V DI+RR++ YF + ++TDIDDKII++A N L E++++ +
Sbjct: 56 GHARNYVTQDILRRVMTDYFGYDVHFVMNITDIDDKIISRARQNHLIENFRSESNALTPE 115
Query: 202 LIFKI-------LHQKVVRKLAIDLK------KAKVDSGPVLTKCDEFRDELLALGVQIK 248
L+ + + KV + L D K +A VL + E++ E L +
Sbjct: 116 LVDTVFEAWTIHVRDKVNKGLPSDQKVVEGSEEASWPKLSVLIQSPEWKQECLKRDEKFD 175
Query: 249 -----DQKC-----EATWQFKDGKVFSDRV--FISLPLYLILIQVSLLGPLTLRTVVFEF 296
+C A Q + G D I ++ + T+
Sbjct: 176 MHFTAANRCLLAIRNARDQMQSGVKSVDEAHNLIDESKDILARTLDAKYKSTVTDPNISR 235
Query: 297 LFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV 356
+E ++FE M + V P TRV+EFIP I FI+ ++D AY S+ SVYF+
Sbjct: 236 SLASYWETKFFEDMARLNVREPDTVTRVTEFIPEIVDFIKRIMDNGFAY-ESEGSVYFNT 294
Query: 357 DSFPH-----YFKL--WGRNE---------NITQHAVKRSPFDFALWKSAKPGEPWYESA 400
F + Y KL W + ++ +RS DFALWK++KPGEP + S
Sbjct: 295 IKFDNADDHDYAKLEPWSKGNRELLEDGEGSLANKTGRRSASDFALWKASKPGEPSWPSF 354
Query: 401 WGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLH 460
WG GRPGWHIECS MAS FG +D+H+GGIDL FPHH+NE AQS A+HN WVNY+ H
Sbjct: 355 WGPGRPGWHIECSVMASAIFGDNMDIHSGGIDLAFPHHDNEMAQSEAYHNCRAWVNYFWH 414
Query: 461 TGHL 464
TGHL
Sbjct: 415 TGHL 418
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 68/103 (66%), Gaps = 4/103 (3%)
Query: 20 PKWSLPSGY--DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
P WSLP + + +YN +T+TK F+ N+ H+KWY CGPTVYD+ H+GHA V
Sbjct: 5 PPWSLPKQQPEEPVLYVYNSLTRTKTKFVPTNERHVKWYNCGPTVYDASHLGHARNYVTQ 64
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKT 118
DI+RR++ YF + ++TDIDDKII++A N L E++++
Sbjct: 65 DILRRVMTDYFGYDVHFVMNITDIDDKIISRARQNHLIENFRS 107
>gi|449280832|gb|EMC88057.1| Cysteinyl-tRNA synthetase, cytoplasmic, partial [Columba livia]
Length = 822
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/357 (34%), Positives = 178/357 (49%), Gaps = 58/357 (16%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA----------------NSL 187
GHA + DI+RRIL YF + ++TDIDDKII +A + L
Sbjct: 140 GHARSYISFDILRRILRDYFKYEILYCMNITDIDDKIIKRARQNYLFERYRENKSAPDQL 199
Query: 188 KEDYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQI 247
ED KT ++ + ++L K +++ ++ A V + D ++ + A
Sbjct: 200 LEDVKTASELFSVKLNETTDPDK--KQMLERIQNA------VKSAFDPLQEAVQAKLPAE 251
Query: 248 KDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYF 307
+ +C + + SD + + G +F L F +E E+
Sbjct: 252 EVNRCHEVLLEEARDLLSDWLDMKF------------GSQVTDNSIFSKLPKF-WEAEFH 298
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH-----Y 362
+ ME VLPP TRVSE++P I F++ ++D Y+ S+ SVYFD F Y
Sbjct: 299 KDMEALNVLPPDALTRVSEYVPEIVDFVKRIVDNGYGYV-SNGSVYFDTVKFDSSEKHSY 357
Query: 363 FKLW----GRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPG 407
KL G + + + + K SP DFALWKS+KPGEP ++S WG+GRPG
Sbjct: 358 AKLVPEAVGDQKALQEGEGDLSISADRLSEKHSPNDFALWKSSKPGEPSWDSPWGRGRPG 417
Query: 408 WHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
WHIECSAMA G +D+H GG DL+FPHH+NE AQS A+ + WV Y+LHTGHL
Sbjct: 418 WHIECSAMAGCILGESMDIHGGGFDLRFPHHDNELAQSEAYFENNHWVRYFLHTGHL 474
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P WS P G + + +YN +T+ K F QN + WY CGPTVYD+ H+GHA + D
Sbjct: 90 PPWSPPEGTKHSRLCLYNSLTRNKEIFQPQNGKKVLWYCCGPTVYDASHMGHARSYISFD 149
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYK 117
I+RRIL YF + ++TDIDDKII +A N L E Y+
Sbjct: 150 ILRRILRDYFKYEILYCMNITDIDDKIIKRARQNYLFERYR 190
>gi|427781549|gb|JAA56226.1| Putative cysteinyl-trna synthetase [Rhipicephalus pulchellus]
Length = 748
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/343 (36%), Positives = 182/343 (53%), Gaps = 39/343 (11%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA + DI+RR+L YF + + ++TDIDDKII +A ++D+ + R L
Sbjct: 62 GHARSYISFDILRRVLTDYFGYNVFYVMNITDIDDKIIKRA---RQDHLFASYRSNLERS 118
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGKV 263
L V K A++ +AK L K D+ ++ ++ DQ +A F+
Sbjct: 119 PSTLLSDV--KEAVERYRAK------LEKEDDPDKRVMC--SRLLDQALQALDVFEKASG 168
Query: 264 FSDRVFI----SLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPT 319
+R + P+ L S +G +F L +E E+++ M V PP
Sbjct: 169 GGEREALLDNAKDPVSEWLD--SKMGSTVSDHSIFAELAK-HWEEEFYKDMAALAVRPPD 225
Query: 320 RATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV---DSFPHYF------KLWGRNE 370
TRVSE++P I ++ ++D AY+ S+ SVYFD D+ P +F + +G +
Sbjct: 226 VVTRVSEYVPEIVDYVGKIIDRGFAYV-SNGSVYFDTARFDADPEHFYAKLVPEAYGDQK 284
Query: 371 NITQH----AV-----KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFG 421
+ + AV KRS DFALWK++KPGEP ++S WG GRPGWHIECS MA G
Sbjct: 285 ALKEGEGALAVAGDDEKRSANDFALWKASKPGEPAWQSPWGPGRPGWHIECSVMAGSLLG 344
Query: 422 GQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
+D+HTGG DLKFPHH+NE AQ+ A+ WV Y+LH+GHL
Sbjct: 345 SSLDIHTGGYDLKFPHHDNELAQAEAYFGNDHWVRYFLHSGHL 387
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Query: 9 LALSYATSCESPKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPH 67
+A S ++ P W P +++YN +T++K F+ QN N + WY+CGPTVYD+ H
Sbjct: 1 MADSKSSKRSQPPWKAPDNASAPQLRLYNSLTRSKEVFVPQNANRVLWYSCGPTVYDASH 60
Query: 68 IGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
+GHA + DI+RR+L YF + + ++TDIDDKII +A
Sbjct: 61 MGHARSYISFDILRRVLTDYFGYNVFYVMNITDIDDKIIKRA 102
>gi|189206896|ref|XP_001939782.1| cysteinyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187975875|gb|EDU42501.1| cysteinyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 797
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 181/372 (48%), Gaps = 59/372 (15%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS--------------LKE 189
GHA V DI+RRIL HY+ + + ++TD+DDKII + +E
Sbjct: 61 GHARNYVTNDILRRILAHYYGYNVKFVQNITDVDDKIILRGRQQHLLAKFKAENPSVTRE 120
Query: 190 DYKTVAKRY--FLRLIFKILHQKV---------VRKLAIDLKKAKVDS-GPVLTKCDEFR 237
T K + +++ +L Q V K A ++ +D GP K + +
Sbjct: 121 VIDTTIKAFDAYIKKNLPLLSQDVNIDTFNNDSADKYANVIQGKSIDGVGPPGDKEAKIK 180
Query: 238 DELLALGVQIKDQKCEATWQFKDGKVF-SDRVFISLP----LYLILIQVSLLGPLTLRTV 292
L + + +D VF + + LP LY I S T T
Sbjct: 181 MHLRTASTAVTSLLAPSKSTPEDVDVFYAGAEDVLLPYLDSLYGSTIDASDHSVFTTLTK 240
Query: 293 VFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSV 352
+E FN E M+ VL P TRV+E+ I SF+ ++ AY SD SV
Sbjct: 241 KYEARFN--------EDMQNLNVLEPDVVTRVTEYGNEIVSFVDKIIKNGMAYSTSDGSV 292
Query: 353 YFDVDSFP----HYFKL--WGRNENITQH-----------AVKRSPFDFALWKSAKPGEP 395
YFD+++F HY +L W R + Q + KR+ DFALWKS+KPGEP
Sbjct: 293 YFDIENFEKEGNHYARLEPWNRGDTNLQADGEGALSSVKTSEKRNDSDFALWKSSKPGEP 352
Query: 396 WYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQ---S 452
+ S WG GRPGWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A+ + +
Sbjct: 353 AWNSPWGPGRPGWHIECSVMASAVLGEQMDIHSGGIDLCFPHHDNELAQSEAYWQKDGGA 412
Query: 453 QWVNYWLHTGHL 464
QWVNY+LH GHL
Sbjct: 413 QWVNYFLHMGHL 424
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 20 PKWSLPSGYDTG-IKIYNPITKTKVPFIIQNKN--HLKWYACGPTVYDSPHIGHAVCNVK 76
P W P +K++N +T+TK FI + +KWY+CGPTVYD H+GHA V
Sbjct: 9 PPWKEPKASSAAKLKVWNSLTRTKNDFIPIDPEGKEVKWYSCGPTVYDDAHLGHARNYVT 68
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKII 106
DI+RRIL HY+ + + ++TD+DDKII
Sbjct: 69 NDILRRILAHYYGYNVKFVQNITDVDDKII 98
>gi|449542730|gb|EMD33708.1| hypothetical protein CERSUDRAFT_87037 [Ceriporiopsis subvermispora
B]
Length = 775
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 182/365 (49%), Gaps = 46/365 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS--LKEDYKTVAKRYFLR 201
GHA V D++RRI+ YF + ++TDIDDKII +A L E +++ + +
Sbjct: 56 GHARNYVTQDVLRRIMTDYFGYDVHFVMNITDIDDKIILRARQTHLVEKFRSESTSLSQK 115
Query: 202 LIFKIL-------HQKVVRKLAIDLKKAKVDSGPVLTKCD-EFRDELLALGVQIKDQKCE 253
L+ ++ K+ + L + K + + F+D+ L +D+K E
Sbjct: 116 LLDDVIAAWAAYVSSKLSKGLPETERPGKGKEREIFPQLSARFQDKEWRLEGLKRDEKFE 175
Query: 254 ---------------ATWQFKDGKVFSD---RVFISLPLYLILIQVSLLGPLTLRTVVFE 295
A K G+ + ++ S L G +F
Sbjct: 176 MHFNATNASYAAILAAEESLKTGQTGQEAAHKLIESSHDVLAAWLDKQYGSTVTDHSIFR 235
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFD 355
L + +E ++FE M + V P TRV+E++P I SF++ ++ Y D SVYFD
Sbjct: 236 SLAAY-WEGQFFEDMRRLRVRDPDTLTRVTEYVPEIVSFVEGIVKNGYGY-AVDGSVYFD 293
Query: 356 VDSFPH-----YFKL--WGRNEN---------ITQHAVKRSPFDFALWKSAKPGEPWYES 399
+F Y KL W ++ ++ +RSP DFALWK++KPGEP + S
Sbjct: 294 TRTFDKADDHTYAKLEPWSKSNTELLEEGEGALSNATGRRSPADFALWKASKPGEPSWPS 353
Query: 400 AWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWL 459
WG GRPGWHIECS MAS FG +D+H+GGIDL FPHH+NE AQS A+HN WVNY++
Sbjct: 354 PWGPGRPGWHIECSVMASAVFGDNMDIHSGGIDLAFPHHDNEMAQSEAYHNCPAWVNYFI 413
Query: 460 HTGHL 464
HTGHL
Sbjct: 414 HTGHL 418
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
Query: 20 PKWSLPS--GYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
P WS P+ + +K+YN +T+TK F+ + H+KWY CGPTVYD+ H+GHA V
Sbjct: 5 PTWSPPARKAEEPVLKVYNSLTRTKTEFVASDGRHVKWYNCGPTVYDASHMGHARNYVTQ 64
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
D++RRI+ YF + ++TDIDDKII +A
Sbjct: 65 DVLRRIMTDYFGYDVHFVMNITDIDDKIILRA 96
>gi|224050868|ref|XP_002197995.1| PREDICTED: cysteine--tRNA ligase, cytoplasmic [Taeniopygia guttata]
Length = 831
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 174/349 (49%), Gaps = 42/349 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY---KTVAKRY 198
GHA + DI+RRIL YF ++TDIDDKII +A N L E Y K+ +
Sbjct: 149 GHARSYISFDILRRILRDYFKYDVFYCMNITDIDDKIIKRARQNHLFERYRESKSTPDQL 208
Query: 199 F--LRLIFKILHQKVVRKLAIDLKKA-KVDSGPVLTKCDEFRDELLALGVQIKDQKCEAT 255
+R ++ K+ D K+ + V + D ++ + A + +C T
Sbjct: 209 LEDIRTASELFSVKLNETTDPDKKQMLERIQNAVKSAFDPLQEAIQAKLPAEEINRCHET 268
Query: 256 WQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGV 315
+ + SD + + G +F L F +E E+ + ME V
Sbjct: 269 LLEEAKDLLSDWL------------DTKFGSQVTDNSIFSKLPKF-WEAEFHKDMEALNV 315
Query: 316 LPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKLW---- 366
LPP TRVSE++P I F++ ++D Y+ S+ SVYFD F Y KL
Sbjct: 316 LPPDVLTRVSEYVPEIVDFVKKIVDNGYGYV-SNGSVYFDTMKFDASEKHSYAKLVPEAV 374
Query: 367 GRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAM 415
G + + + + K SP DFALWKS+KPGEP ++S WGKGRPGWHIECSAM
Sbjct: 375 GDQKALQEGEGDLSISADRLSEKHSPNDFALWKSSKPGEPSWDSPWGKGRPGWHIECSAM 434
Query: 416 ASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G +D+H GG DL+FPHH+NE AQS A+ WV Y+LHTGHL
Sbjct: 435 GGSVLGESMDIHGGGFDLRFPHHDNELAQSEAYFENDHWVRYFLHTGHL 483
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P WS P G + + +YN +T++K F QN + WY CGPTVYD+ H+GHA + D
Sbjct: 99 PPWSPPEGTKHSRLCLYNSLTRSKEVFQPQNGKKVLWYCCGPTVYDASHMGHARSYISFD 158
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYK 117
I+RRIL YF ++TDIDDKII +A N L E Y+
Sbjct: 159 ILRRILRDYFKYDVFYCMNITDIDDKIIKRARQNHLFERYR 199
>gi|326480593|gb|EGE04603.1| cysteinyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
Length = 790
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 131/389 (33%), Positives = 193/389 (49%), Gaps = 70/389 (17%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V DI+RRIL YF I ++TD+DDKII T ++ L
Sbjct: 65 GHARNYVSADIVRRILRDYFKFDVKYIMNITDVDDKII-----------TRGRQQHLYDQ 113
Query: 204 FKILHQKVVRKLAIDLKKAKVDSG--------PVLTKCDEFRD---ELLALGVQIKDQKC 252
F H + ++L +D KA ++ PV T E +D E+ A + K +
Sbjct: 114 FSAEHPSIDQEL-LDTAKAAYEAYIAKNLPLIPVSTPTHELKDTAEEVYAAVLDGKPLEG 172
Query: 253 EATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRT-------VVFEFLFNFR---- 301
+ + KV +S+ + + G + + T +++ L +
Sbjct: 173 NSKPGEPEAKVKMYIRTLSVAAEALTMASIPGGSIPVATFYEKTQDILYPHLDTLKGASI 232
Query: 302 --------------YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIG 347
YE + + + VL P TRV+EF+P I SF++ +++ K Y+
Sbjct: 233 QGSDHSIFTRLTKEYEDRFMQDVRDLNVLDPDEITRVTEFMPEIVSFVERIIEHKFGYVT 292
Query: 348 SDHSVYFDVDSFP----HYFKL--WGRNENITQ----------HAVKRSPFDFALWKSAK 391
D SVYFD+++F Y +L W RN+ Q A K+S DFALWK++K
Sbjct: 293 PDGSVYFDIENFEAAGNSYARLEPWNRNDANRQSEGEGSLSNKQAKKKSSADFALWKASK 352
Query: 392 PGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQ 451
GEP + S WG GRPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS A+ +
Sbjct: 353 AGEPSWPSPWGNGRPGWHIECSAMASSRLGKQMDIHSGGIDLAFPHHDNEIAQSEAYWSS 412
Query: 452 S----QWVNYWLHTGHL--RGTDGTRRLR 474
+ QWVNY++H GHL +G+ ++ L+
Sbjct: 413 TCSHVQWVNYFIHMGHLSIQGSKMSKSLK 441
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Query: 14 ATSCESPKWSLPSGYD------TGIKIYNPITKTKVPFIIQNKNHLK--WYACGPTVYDS 65
A E P W P+ + +KI+N +T++K PF+ + K WYACGPTVYD
Sbjct: 2 AAPREQPPWQQPTPHQGLQRELPPLKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDD 61
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
H+GHA V DI+RRIL YF I ++TD+DDKII +
Sbjct: 62 AHLGHARNYVSADIVRRILRDYFKFDVKYIMNITDVDDKIITRG 105
>gi|47213255|emb|CAF92916.1| unnamed protein product [Tetraodon nigroviridis]
Length = 852
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 151/486 (31%), Positives = 218/486 (44%), Gaps = 90/486 (18%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P WS P+G D +++YN +T+ KV + + A P P + A+C+ +
Sbjct: 7 PPWSPPAGTDGPRLRLYNSLTRAKV----RGRPPDADAALVPFQRLIPELIPALCSGAVR 62
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVG 138
R H + + + +T + ++ + R L +
Sbjct: 63 PSERQQSHLVQLRAHGVRRLT-------HGTRQVRHAHTRTHTR--------ALTHTLTP 107
Query: 139 SIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAK 196
S P R + + DI+RRIL YF ++TDIDDKII +A N L + YK
Sbjct: 108 SPPRRSY----ISFDILRRILRDYFKYEVFYCMNITDIDDKIIKRARQNFLLDQYKEKGP 163
Query: 197 RYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCE--- 253
+ ++ D+++A+ + F+ +L A K Q E
Sbjct: 164 Q--------------AAQVLQDVRRAR----------EPFQAQLAATADPDKKQMLERLD 199
Query: 254 -----ATWQFKDGKVFSDRVFISLPLYLILIQVS--LL--------GPLTLRTVVFEFLF 298
A + PL L++ S LL G +F L
Sbjct: 200 AAVSAALQPLQAALEARAAEEALRPLAQALLENSKDLLADWLDRQAGSQVTENSIFFSLP 259
Query: 299 NFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV-- 356
F +E E+ + ME VLPP TRVSE++P I F+ ++ Y S+ SVYFD
Sbjct: 260 KF-WEEEFHKDMEALNVLPPDVLTRVSEYVPEIVDFVAKVISNGYGY-ESNGSVYFDTAK 317
Query: 357 -DSFPH--YFKLW----GRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYE 398
D+ P Y KL G + + + + K+SP DFALWK++KPGEP ++
Sbjct: 318 FDASPQHSYAKLVPEAVGDQKALQEGEGDLSVSAERLSEKKSPNDFALWKASKPGEPSWD 377
Query: 399 SAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYW 458
S WGKGRPGWHIECSAMA G +D+H GG DL+FPHH+NE AQS AF + WV Y+
Sbjct: 378 SPWGKGRPGWHIECSAMAGTVLGESMDVHGGGFDLRFPHHDNELAQSEAFFDNDHWVRYF 437
Query: 459 LHTGHL 464
LHTGHL
Sbjct: 438 LHTGHL 443
>gi|258597035|ref|XP_001347434.2| cysteinyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
gi|254922413|gb|AAN35347.2| cysteinyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
Length = 677
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 130/201 (64%), Gaps = 19/201 (9%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
++E E++E M+ VL PT TRVSE++ I +I+ +++ K AY+ + SVYFD+D F
Sbjct: 197 KWEYEFWEDMKSLNVLLPTAITRVSEYVGDIVKYIEKIIENKYAYVSEEGSVYFDIDEFK 256
Query: 361 ----HYFK----LWGRNENITQHAV---------KRSPFDFALWKSAKPGEPWYESAWGK 403
H++ L ++EN K++ +DFALWKS+KP EP ++S WGK
Sbjct: 257 KSEKHFYARMEPLSVKDENKILEGEGDLGVISKKKKNAYDFALWKSSKPNEPHWDSPWGK 316
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGH 463
GRPGWHIECS MAS+ G +D+H+GGIDL+FPHH+NE AQS AF + SQWVNY+LH+GH
Sbjct: 317 GRPGWHIECSTMASNILGDVLDIHSGGIDLRFPHHDNELAQSEAFFDHSQWVNYFLHSGH 376
Query: 464 L--RGTDGTRRLRAARFITNL 482
L G ++ L+ I N+
Sbjct: 377 LHIEGLKMSKSLKNFITIKNM 397
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 20 PKWSLPSGYD---TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVK 76
PKW+ PS T + + N +T +KV FI Q N +KWYACGPTVYD+ H+GHA V
Sbjct: 92 PKWNQPSKEGKKITNLFVNNSLTHSKVEFIPQEGNKIKWYACGPTVYDAAHLGHARTYVS 151
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
DIIRRIL +YF ++ ++TDIDDKII ++ K + +A+++
Sbjct: 152 FDIIRRILVNYFKYDVFMVINITDIDDKIIKRSVEEKIGFTELARKW 198
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V DIIRRIL +YF ++ ++TDIDDKII ++ K + +A+++
Sbjct: 144 GHARTYVSFDIIRRILVNYFKYDVFMVINITDIDDKIIKRSVEEKIGFTELARKW 198
>gi|409080249|gb|EKM80609.1| hypothetical protein AGABI1DRAFT_37031 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 777
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 129/364 (35%), Positives = 181/364 (49%), Gaps = 44/364 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA V DI+RR++ YF + ++TDIDDKII++A N L E++++ +
Sbjct: 56 GHARNYVTQDILRRVMTDYFGYDVHFVMNITDIDDKIISRARQNHLIENFRSESNALTPE 115
Query: 202 LIFKI-------LHQKVVRKLAIDLK------KAKVDSGPVLTKCDEFRDELLALGVQIK 248
L+ + + KV + L D K +A VL + E++ E L +
Sbjct: 116 LVDTVFEAWTIHVRDKVNKGLPSDQKVVEGSEEASWPKLSVLIQNAEWKQECLKRDEKFD 175
Query: 249 -----DQKC-----EATWQFKDGKVFSDRV--FISLPLYLILIQVSLLGPLTLRTVVFEF 296
+C A Q + G D I ++ + T+
Sbjct: 176 MHFTAANRCLLAIRNARDQIQSGIKSVDEAHNLIDESKDILARTLDAKYKSTVTDPNISR 235
Query: 297 LFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV 356
+E ++FE M + V P TRV+EFIP I FI+ ++D AY S+ SVYF+
Sbjct: 236 SLASYWETKFFEDMARLNVREPDTVTRVTEFIPEIVDFIKRIMDNGFAY-ESEGSVYFNT 294
Query: 357 DSFPH-----YFKL--WGRNE---------NITQHAVKRSPFDFALWKSAKPGEPWYESA 400
F + Y KL W + ++ +RS DFALWK++KPGEP + S
Sbjct: 295 IKFDNADDHNYAKLEPWSKGNRELLEDGEGSLANKTGRRSASDFALWKASKPGEPSWPSF 354
Query: 401 WGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLH 460
WG GRPGWHIECS MAS FG +D+H+GGIDL FPHH+NE AQS A+HN WVNY+ H
Sbjct: 355 WGPGRPGWHIECSVMASAIFGDNMDIHSGGIDLAFPHHDNEMAQSEAYHNCRAWVNYFWH 414
Query: 461 TGHL 464
TGHL
Sbjct: 415 TGHL 418
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 68/103 (66%), Gaps = 4/103 (3%)
Query: 20 PKWSLPSGY--DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
P WSLP + + +YN +T+TK F+ N+ H+KWY CGPTVYD+ H+GHA V
Sbjct: 5 PPWSLPKQQPEEPVLYVYNSLTRTKTKFVPTNERHVKWYNCGPTVYDASHLGHARNYVTQ 64
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKT 118
DI+RR++ YF + ++TDIDDKII++A N L E++++
Sbjct: 65 DILRRVMTDYFGYDVHFVMNITDIDDKIISRARQNHLIENFRS 107
>gi|440292097|gb|ELP85339.1| cysteinyl-tRNA synthetase, cytoplasmic, putative [Entamoeba
invadens IP1]
Length = 700
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 173/337 (51%), Gaps = 31/337 (9%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA + DI RRILE YF I +VTD+DDKII KA ++ L
Sbjct: 41 GHARTYLSTDIFRRILEDYFGYPVIQCMNVTDVDDKIIFKA-----------RKNLLIAK 89
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKC-DEFRDE-LLALGVQIKDQKCEATWQFKDG 261
+ H KV + +K+A + + K E +D +LAL K Q E T F
Sbjct: 90 YCKEHSKVDTTVISAMKEAWNEHKASIEKTMSETKDAAMLAL---FKAQLEEYTKVFPTL 146
Query: 262 KVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNF------RYELEYFESMEKFGV 315
++ + + + L TV + + +YE +F + G+
Sbjct: 147 DKLMNKETTEVFASMTDVMGKYLDARLKETVDSDEMKEAARTHARKYEDLFFADCDALGI 206
Query: 316 LPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNE----- 370
P +RV+EFIP I ++IQ ++D AY+ S+ SVYFD +F +GR E
Sbjct: 207 RRPDIISRVTEFIPEIIAYIQKIIDNGYAYV-SNGSVYFDTAAFRKAGMTYGRLEPWSVG 265
Query: 371 --NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHT 428
+ K + DFALWK +K GEPW+ S WG GRPGWHIECS MAS+ FG +D+H+
Sbjct: 266 EIDAPADGEKHNKNDFALWKKSKSGEPWWASQWGNGRPGWHIECSCMASNVFGDTLDIHS 325
Query: 429 GGIDLKFPHHENEEAQSCAFHN-QSQWVNYWLHTGHL 464
GG DL FPHHENE AQS A+ N ++ WV Y+LHTGHL
Sbjct: 326 GGEDLSFPHHENELAQSEAYFNKKTSWVRYFLHTGHL 362
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 39/57 (68%)
Query: 53 LKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
++WY CGPTVYD H+GHA + DI RRILE YF I +VTD+DDKII KA
Sbjct: 25 IRWYCCGPTVYDDSHLGHARTYLSTDIFRRILEDYFGYPVIQCMNVTDVDDKIIFKA 81
>gi|336371980|gb|EGO00320.1| hypothetical protein SERLA73DRAFT_122355 [Serpula lacrymans var.
lacrymans S7.3]
Length = 774
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 127/364 (34%), Positives = 183/364 (50%), Gaps = 45/364 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA V DI+RRI+ YF + +VTDIDDKII +A N L +++
Sbjct: 57 GHARNYVTQDILRRIMTDYFGYDVHFVQNVTDIDDKIILRARQNHLFNKFRSETTSLSPE 116
Query: 202 LIFKI-------LHQKVVRKLAIDLKKAKVDSGPVLTK-CDEFRDELLALGVQIKDQKCE 253
LI +I +H+K+ + L + + D + D F+D+ +D+K +
Sbjct: 117 LIAQIQEAWSIYVHEKISKGLPESERPSNGDEAKSWPRLADLFKDKAWKQECLKRDEKFD 176
Query: 254 ----------ATWQFKDGKVFSDRVFISLPLYLI-----LIQVSL---LGPLTLRTVVFE 295
+ Q +G + S+ V + L+ ++ VSL +F
Sbjct: 177 MHFSAANKAYSAVQVAEGLLRSNCVGQDVTHQLLEESRDILAVSLDEKYKSTVTDPSIFR 236
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFD 355
L + +E ++F ME+ V P TRV+E++P + F+ ++ Y + SVYFD
Sbjct: 237 SLAAY-WEGQFFSDMERLRVREPDTVTRVTEYVPEVVDFVHGIIKNGYGY-EHEGSVYFD 294
Query: 356 VDSFP-----HYFKL--WGRN--------ENITQHAVKRSPFDFALWKSAKPGEPWYESA 400
+F Y KL W + E + S DFALWK++KPGEP + S
Sbjct: 295 TSAFDTSEGHDYAKLEPWSKGNRELLEEGEGALSSRTQWSASDFALWKASKPGEPSWPSP 354
Query: 401 WGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLH 460
WG GRPGWHIECS MAS FG +D+H+GGIDL FPHH+NE AQS A+HN WVNY++H
Sbjct: 355 WGAGRPGWHIECSVMASAVFGDNMDIHSGGIDLAFPHHDNEMAQSEAYHNCGSWVNYFIH 414
Query: 461 TGHL 464
TGHL
Sbjct: 415 TGHL 418
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 79/137 (57%), Gaps = 11/137 (8%)
Query: 16 SCESPKWSLPSGY--DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
S + P WSLPS + +K+YN +TKTK FI ++ +KWY CGPTVYD+ H+GHA
Sbjct: 2 SVQQPPWSLPSRKTDEPVLKLYNSLTKTKTEFIPRDGRRVKWYNCGPTVYDASHMGHARN 61
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLPLIFKI 131
V DI+RRI+ YF + +VTDIDDKII +A N L +++ LI +I
Sbjct: 62 YVTQDILRRIMTDYFGYDVHFVQNVTDIDDKIILRARQNHLFNKFRSETTSLSPELIAQI 121
Query: 132 -------LHQKVVGSIP 141
+H+K+ +P
Sbjct: 122 QEAWSIYVHEKISKGLP 138
>gi|60302812|ref|NP_001012601.1| cysteine--tRNA ligase, cytoplasmic [Gallus gallus]
gi|82231219|sp|Q5F408.1|SYCC_CHICK RecName: Full=Cysteine--tRNA ligase, cytoplasmic; AltName:
Full=Cysteinyl-tRNA synthetase; Short=CysRS
gi|60098591|emb|CAH65126.1| hypothetical protein RCJMB04_3o5 [Gallus gallus]
Length = 748
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 126/357 (35%), Positives = 173/357 (48%), Gaps = 58/357 (16%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS----------------L 187
GHA + DI+RRIL YF ++TDIDDKII + L
Sbjct: 66 GHARSYISFDILRRILRDYFKFDVFYCMNITDIDDKIIKRTRQNYLFEQYRKNKSTPAQL 125
Query: 188 KEDYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQI 247
ED KT ++ + ++L K R++ ++ A V + D ++ + A
Sbjct: 126 LEDVKTASELFSVKLSETTDPDK--RQMLEKIQNA------VKSAFDPLQEAVQAKLPAE 177
Query: 248 KDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYF 307
+ +C + + SD + S G +F L F +E E+
Sbjct: 178 EISRCHEILLEEAKDLLSDWL------------DSKFGSQVTDNSIFSELPKF-WEGEFH 224
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HY 362
+ ME VLPP TRVSE++P I +F++ ++D Y+ S+ SVYFD F Y
Sbjct: 225 KDMEALNVLPPDVLTRVSEYVPEIVAFVKKIVDNGYGYV-SNGSVYFDTVKFGSSEKHSY 283
Query: 363 FKLWGR---NENITQHA------------VKRSPFDFALWKSAKPGEPWYESAWGKGRPG 407
KL ++ Q K SP DFALWKS+KPGEP ++S WGKGRPG
Sbjct: 284 AKLVPEAVGDQKALQEGEGDLSISADRLCEKHSPNDFALWKSSKPGEPSWDSPWGKGRPG 343
Query: 408 WHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
WHIECSAMA G +D+H GG DL+FPHH+NE AQS A+ WV Y+LHTGHL
Sbjct: 344 WHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAYFENDNWVRYFLHTGHL 400
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P WS P G + + +YN +T+ K F QN + WY CGPTVYD+ H+GHA + D
Sbjct: 16 PPWSPPEGTKHSRLCLYNSLTRNKEIFQPQNGKKVTWYCCGPTVYDASHMGHARSYISFD 75
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYK 117
I+RRIL YF ++TDIDDKII + N L E Y+
Sbjct: 76 ILRRILRDYFKFDVFYCMNITDIDDKIIKRTRQNYLFEQYR 116
>gi|398394070|ref|XP_003850494.1| hypothetical protein MYCGRDRAFT_74458 [Zymoseptoria tritici IPO323]
gi|339470372|gb|EGP85470.1| hypothetical protein MYCGRDRAFT_74458 [Zymoseptoria tritici IPO323]
Length = 794
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 187/382 (48%), Gaps = 60/382 (15%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII-------------NKANSLKED 190
GHA V DIIRRI++ YF + ++TD+DDKII K + E+
Sbjct: 62 GHARNYVSQDIIRRIMQDYFKFDVNFVMNITDVDDKIILAARQQHLLAQFLAKHTEVDEE 121
Query: 191 YKTV---AKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQI 247
+T A + +L+ ++ + ++K G VL D G
Sbjct: 122 VRTTTTEAFKAYLKKNLPLIEEATPESYTTSVEK---QYGHVLAGKSVAND-----GTPP 173
Query: 248 KDQKCEATWQFKDGKVFSDRVFISLPLY---------LILIQVSLLGPLTLRTVVFEFLF 298
D++ + + + +S P ++L + L T++ +
Sbjct: 174 GDKEAKVKMHLNTASSAAQALLLSSPSMDEFTAKASGVLLPHIDSLYSTTVKGDDHDIFT 233
Query: 299 NF--RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV 356
RYE +FE M V P + TRV+E+ P I SF++ + D K AY ++ SVY+D
Sbjct: 234 KLTKRYEQRFFEDMTNLNVRYPDKLTRVTEYGPQIVSFVKQIEDNKFAY-ANEGSVYYDT 292
Query: 357 DSFP----HYFKL--WGRNEN-----------ITQHAVKRSPFDFALWKSAKPGEPWYES 399
++ HY +L W RN+ + K+S DFALWK++KPGEP ++S
Sbjct: 293 TAWEASGGHYARLEPWNRNDTELLADGEGSLAAKKTTFKKSNADFALWKASKPGEPSWDS 352
Query: 400 AWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF-----HNQSQW 454
WG GRPGWHIECSAMAS G Q D+H+GGIDL FPHH+NE AQS A+ + QW
Sbjct: 353 PWGPGRPGWHIECSAMASDVLGKQFDIHSGGIDLAFPHHDNELAQSEAYWHKCGADSEQW 412
Query: 455 VNYWLHTGHL--RGTDGTRRLR 474
VNY++H GHL +G+ ++ L+
Sbjct: 413 VNYFIHMGHLSIQGSKMSKSLK 434
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Query: 16 SCESPKWSLPSGYDTG----IKIYNPITKTKVPFIIQNKNHLK--WYACGPTVYDSPHIG 69
+ + PKW+ P +T + +YN +T++K PF ++ K WYACGPTVYD H+G
Sbjct: 3 ATQQPKWTAPIRSETAKLPSLTVYNSLTRSKTPFTPRDPQGRKVGWYACGPTVYDDAHLG 62
Query: 70 HAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII 106
HA V DIIRRI++ YF + ++TD+DDKII
Sbjct: 63 HARNYVSQDIIRRIMQDYFKFDVNFVMNITDVDDKII 99
>gi|358374115|dbj|GAA90709.1| cysteinyl-tRNA synthetase [Aspergillus kawachii IFO 4308]
Length = 804
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 133/409 (32%), Positives = 193/409 (47%), Gaps = 52/409 (12%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPT------RGHAVCNVKLDIIRRILEHYFHIHSIVIS 171
T +K F+PL K K PT GHA V DI+RRIL YF +
Sbjct: 30 TRSKTPFVPLDPKGRKVKWYACGPTVYDDAHLGHARNYVSTDILRRILRDYFKFDVEFVM 89
Query: 172 SVTDIDD-------------KIINKANSLKEDYKTVAKRYFLRLIFKILH----QKVVRK 214
++TD+DD K I + ++ D A++ + I K L +
Sbjct: 90 NITDVDDKIILRGRQQHLFNKYIAEHPTVTPDVLETARKAYSAYIKKNLPLVDPETKPEN 149
Query: 215 LAIDLKK--AKVDSGPVLTKCDEFRDELLALGVQIK------DQKCEATWQFKDGKVFSD 266
+ +K V G L + D + + + IK EA + S
Sbjct: 150 FVAEAEKVYGVVLQGGALEADKKPGDAEVKIKMHIKTVTATTSAIAEAAQKLSGIDAASS 209
Query: 267 RVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNF--RYELEYFESMEKFGVLPPTRATRV 324
+ F + + + T+ E +YE + M VL P TRV
Sbjct: 210 KAFYDAAQDVFCFYLDVTEGSTIPGDAHEIFTKLTKKYEDHFMRDMRDLNVLDPDAVTRV 269
Query: 325 SEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP----HYFKL--WGRNEN------- 371
+E+ I F++ ++ K Y+ SD SVYFD+ +F HY +L W RN
Sbjct: 270 TEYGQQIAEFVEKIVANKFGYVTSDGSVYFDIKAFEEAGNHYARLEPWNRNNQPLLRDGE 329
Query: 372 --ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTG 429
+++ K+S DFALWK+++PGEP + S WG+GRPGWHIECSAMAS G Q+D+H+G
Sbjct: 330 GALSRATEKKSSDDFALWKASRPGEPSWSSKWGQGRPGWHIECSAMASSCLGSQIDIHSG 389
Query: 430 GIDLKFPHHENEEAQSCAF--HNQSQWVNYWLHTGHL--RGTDGTRRLR 474
GIDL FPHH+NE AQS A+ ++ QWVNY+LH GHL +G+ ++ L+
Sbjct: 390 GIDLAFPHHDNELAQSEAYWCEHKQQWVNYFLHMGHLSIQGSKMSKSLK 438
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 7/89 (7%)
Query: 20 PKWSLPSGYDTGIKIYNPITKTKVPFIIQNKN--HLKWYACGPTVYDSPHIGHAVCNVKL 77
P LPS +K++N +T++K PF+ + +KWYACGPTVYD H+GHA V
Sbjct: 16 PDTRLPS-----LKVWNSLTRSKTPFVPLDPKGRKVKWYACGPTVYDDAHLGHARNYVST 70
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKII 106
DI+RRIL YF + ++TD+DDKII
Sbjct: 71 DILRRILRDYFKFDVEFVMNITDVDDKII 99
>gi|242001294|ref|XP_002435290.1| cysteinyl-tRNA synthetase, putative [Ixodes scapularis]
gi|215498620|gb|EEC08114.1| cysteinyl-tRNA synthetase, putative [Ixodes scapularis]
Length = 819
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 123/347 (35%), Positives = 178/347 (51%), Gaps = 43/347 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RR+L YF + ++TDIDDKII +A N L E Y++ KR
Sbjct: 62 GHARSYISFDILRRVLADYFGYDIFYVMNITDIDDKIIRRARQNYLLESYRS-EKRSVAS 120
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDG 261
L+ + K A+D+ KV + D + ++ ++ A + +G
Sbjct: 121 LLNDV-------KSAVDVYSQKVQ-----REEDPDKKAMMTRLLEQSQAAIAAAEETPEG 168
Query: 262 KVFSDRVFISL------PLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGV 315
S+ +L P+ L S LG +F L +E E+++ M V
Sbjct: 169 GASSESKRDALLDAAADPVSAWLD--SKLGSAVSDHSIFTKLTR-HWEEEFYKDMTALNV 225
Query: 316 LPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF---PHYF------KLW 366
LPP TRVSE++P I ++ +++ Y S SVYFD F P +F + +
Sbjct: 226 LPPDVVTRVSEYVPEIVDYVAKIVEAGFGY-ESKGSVYFDTARFDGDPGHFYAKLVPEAF 284
Query: 367 GRNE---------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
G + ++ KR+ DFALWK++KPGEP ++S WG GRPGWHIECS MAS
Sbjct: 285 GDRKALREGEGDLSVAGDDEKRNANDFALWKASKPGEPAWDSPWGAGRPGWHIECSVMAS 344
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
+ G +D+HTGG DLKFPHH+NE AQ+ A+ WV Y+LH+GHL
Sbjct: 345 NLLGSSLDIHTGGYDLKFPHHDNEIAQAEAYFGNDHWVRYFLHSGHL 391
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 9 LALSYATSCESPKWSLPSGYDTG-IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPH 67
+A S T P W P D +++YN +++ K F+ Q + WY CGPTVYD+ H
Sbjct: 1 MADSKRTKRSQPVWKAPVNEDGPRLRLYNSLSREKEVFVPQTGKRVLWYNCGPTVYDASH 60
Query: 68 IGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKT 118
+GHA + DI+RR+L YF + ++TDIDDKII +A N L E Y++
Sbjct: 61 MGHARSYISFDILRRVLADYFGYDIFYVMNITDIDDKIIRRARQNYLLESYRS 113
>gi|260825281|ref|XP_002607595.1| hypothetical protein BRAFLDRAFT_119738 [Branchiostoma floridae]
gi|229292943|gb|EEN63605.1| hypothetical protein BRAFLDRAFT_119738 [Branchiostoma floridae]
Length = 636
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 127/352 (36%), Positives = 186/352 (52%), Gaps = 78/352 (22%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY--KTVAKRYF 199
GHA + DI+RR+++ YF+ + ++TDIDDKII +A N L E Y K +++
Sbjct: 2 GHARSYISFDILRRVMKDYFNYDVLYAMNITDIDDKIIKRARQNYLLEQYMDKKPSRKQL 61
Query: 200 L---RLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATW 256
L + K +K+ R+ D KKA +L + +E +A QI + +A+
Sbjct: 62 LDDTQTAMKPYREKLDRETDPD-KKA------MLQRITNKVEETVAKLEQIAENSPDASK 114
Query: 257 QFKDGKVFSDRVFISLPLYLILIQVSLLG----PLTLRTVVFEFLFNFRYELEYFESMEK 312
+ + ++ +L+G PL+ E+ +SM
Sbjct: 115 EDE-------------------LKKALVGDARDPLS----------------EWLDSM-- 137
Query: 313 FGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF----PHYFK---- 364
VLP TRVSE+IP + ++QT++D Y S+ SVYFD F H++
Sbjct: 138 --VLPADVLTRVSEYIPEVIEYVQTIIDKGYGY-ESNKSVYFDTTKFDGADSHFYAKLVP 194
Query: 365 ---------LWGRNE-NITQHAV--KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
L G + +I+Q + KRS DFALWK++KPGEP ++S WG GRPGWHIEC
Sbjct: 195 EAFGDSKAMLEGEGDLSISQDRLSEKRSTTDFALWKASKPGEPSWDSPWGMGRPGWHIEC 254
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
S MAS GG +D+HTGG DLKFPHH+NE AQ+ A+++ WV Y+LH+GHL
Sbjct: 255 SVMASSILGGSLDIHTGGYDLKFPHHDNEIAQAEAYYDNDHWVRYFLHSGHL 306
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 68 IGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY 116
+GHA + DI+RR+++ YF+ + ++TDIDDKII +A N L E Y
Sbjct: 1 MGHARSYISFDILRRVMKDYFNYDVLYAMNITDIDDKIIKRARQNYLLEQY 51
>gi|209877248|ref|XP_002140066.1| cysteinyl-tRNA synthetase [Cryptosporidium muris RN66]
gi|209555672|gb|EEA05717.1| cysteinyl-tRNA synthetase, putative [Cryptosporidium muris RN66]
Length = 591
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 121/181 (66%), Gaps = 18/181 (9%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF- 359
YE E+F+ M V PP TRVSEFIP I +I T++ AY D SVYFD+++F
Sbjct: 131 EYEKEFFDDMHALNVKPPDIITRVSEFIPEILDYISTIIYRGFAY-ECDGSVYFDINAFR 189
Query: 360 PHYFKLWGRNE---------------NITQHAV-KRSPFDFALWKSAKPGEPWYESAWGK 403
+GR E ++ +H+ K+SP DFALWK AKPGEP+++S WGK
Sbjct: 190 SKEGHFYGRMEPKSVADESKVLEGEGDLGEHSKDKKSPLDFALWKKAKPGEPFWDSPWGK 249
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGH 463
GRPGWHIECSAMAS+ G +D+H+GGIDL+FPHH+NE AQS A ++Q QWVNY+LH+GH
Sbjct: 250 GRPGWHIECSAMASNTLGFPIDIHSGGIDLRFPHHDNELAQSEAHYDQPQWVNYFLHSGH 309
Query: 464 L 464
L
Sbjct: 310 L 310
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 61/106 (57%)
Query: 28 YDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHY 87
Y TG+ + N +T K FI N + WYACGPTVYDS H+GHA V DI+RRILE Y
Sbjct: 36 YTTGLILNNSLTAGKTEFIPVNGKRINWYACGPTVYDSAHLGHARTYVTFDIVRRILEDY 95
Query: 88 FHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILH 133
F ++ ++TDIDDKII ++ K D R + F +H
Sbjct: 96 FGYDVYMVMNITDIDDKIIKRSIEQKRDNFLDLAREYEKEFFDDMH 141
>gi|338712278|ref|XP_001492545.3| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like [Equus
caballus]
Length = 833
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 176/349 (50%), Gaps = 41/349 (11%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RR+L YF ++TDIDDKII +A N L E Y+ KR
Sbjct: 150 GHARSYISFDILRRVLRDYFKFDVFYCMNITDIDDKIIKRARQNYLFEQYRE--KRPRAA 207
Query: 202 LIFKILHQKVVRKLAIDLKKA-KVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQ--F 258
+ + +H ++ ++ L + D +L E + V++ + E +
Sbjct: 208 QLLEDVH-AALKPFSVKLSETTDPDKKQML--------ERIQHAVKLAAEPLEEAVRRDL 258
Query: 259 KDGKVFSDRVFISLPLYLILIQV---SLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGV 315
+ S V + L L+ S G +F L F +E E+ + ME V
Sbjct: 259 AGEEELSSHVEVLLDEAKDLLSDWLDSTHGSEVTDNSIFSKLPKF-WEEEFHKDMEALNV 317
Query: 316 LPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL----- 365
LPP TRVSE++P I +F+Q ++D Y S+ SVYFD F Y KL
Sbjct: 318 LPPDVLTRVSEYVPEIVNFVQKIVDNGYGY-ASNGSVYFDTVKFASSEKHSYGKLVPEAV 376
Query: 366 -------WGRNE---NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAM 415
G + + + + KRSP DFALWK++KPGEP + WGKGRPGWHIECSAM
Sbjct: 377 GDQRALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAM 436
Query: 416 ASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
A G +D+H GG DL+FPHH+NE AQS A+ WV Y+LHTGHL
Sbjct: 437 AGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 485
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Query: 20 PKWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P+WS P+G + +++YN +T+ K FI Q+ + WY CGPTVYD+ H+GHA + D
Sbjct: 100 PQWSPPAGSEPCRLRLYNSLTRNKDVFIPQSGKKVTWYCCGPTVYDASHMGHARSYISFD 159
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKR 122
I+RR+L YF ++TDIDDKII +A N L E Y+ R
Sbjct: 160 ILRRVLRDYFKFDVFYCMNITDIDDKIIKRARQNYLFEQYREKRPR 205
>gi|119479397|ref|XP_001259727.1| cysteinyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
gi|119407881|gb|EAW17830.1| cysteinyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
Length = 808
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 135/391 (34%), Positives = 199/391 (50%), Gaps = 69/391 (17%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA------NSLKEDYKTVAKR 197
GHA V DIIRRI+ YFH I ++TD+DDKII +A N + T+A
Sbjct: 65 GHARNYVSTDIIRRIMRDYFHFDVKFIMNITDVDDKIILRARQQHLFNEFVSAHPTIAAE 124
Query: 198 -----------YFLRLIFKILHQKVVRKLAIDLKK--AKVDSGPVLTKCDEFRDELLALG 244
Y + + + + + +++K A V +G L ++ D+ +
Sbjct: 125 VLDIARNAYTAYLKKNLPLLNLELPPAQYQEEVEKVYATVLNGGPLPGNEKAGDDEAKVK 184
Query: 245 VQIKD--------QKCEATWQFKDGKVFSDRVFIS-----LPLYLILIQVSLLGP----- 286
+ IK + E Q K F++ + + LP YL ++ S +
Sbjct: 185 MHIKTVASAAKVIAQAEGLDQATTPKGFAESFYTNAQDLLLP-YLDSLKASSINADDHSI 243
Query: 287 LTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI 346
T T +E F + M VL P TRV+E+ I F++ +++ K Y+
Sbjct: 244 FTKLTKKYEERF--------MKDMRDLNVLDPDELTRVTEYGAEIADFVEKIVENKFGYV 295
Query: 347 GSDHSVYFDVDSFPH----YFKL--WGRNEN---------ITQHAV-KRSPFDFALWKSA 390
D SVYFD+ +F + Y +L W R++N +T+ KRS DFALWK++
Sbjct: 296 TDDGSVYFDITAFENAGHPYARLEPWSRSDNKLLAEGEGALTKKTTEKRSASDFALWKAS 355
Query: 391 KPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF-- 448
KPGEP + S+WG+GRPGWHIECSAMAS G Q+D+H+GG+DL FPHH+NE AQS A+
Sbjct: 356 KPGEPSWTSSWGRGRPGWHIECSAMASAKLGKQMDIHSGGVDLAFPHHDNELAQSEAYWT 415
Query: 449 HNQS---QWVNYWLHTGHL--RGTDGTRRLR 474
H S QWVNY+LH GHL +G+ ++ L+
Sbjct: 416 HGHSHTDQWVNYFLHMGHLSIQGSKMSKSLK 446
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 8/104 (7%)
Query: 14 ATSCESPKWSLPSGYDTG------IKIYNPITKTKVPFIIQNKNHLK--WYACGPTVYDS 65
AT+ + P W P+ Y +KI+N +T++K PFI + K WYACGPTVYD
Sbjct: 2 ATARQQPPWRQPTEYSEAKSRLPPLKIWNSLTRSKNPFIPIDPEGKKVTWYACGPTVYDD 61
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
H+GHA V DIIRRI+ YFH I ++TD+DDKII +A
Sbjct: 62 AHLGHARNYVSTDIIRRIMRDYFHFDVKFIMNITDVDDKIILRA 105
>gi|389741829|gb|EIM83017.1| hypothetical protein STEHIDRAFT_141544 [Stereum hirsutum FP-91666
SS1]
Length = 774
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/375 (35%), Positives = 185/375 (49%), Gaps = 66/375 (17%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA V DI+RRI+ YF + ++TDIDDKII +A N L + ++T +
Sbjct: 56 GHARNYVTQDILRRIMTDYFGYDVHFVMNITDIDDKIILRARQNFLVQRFRTETQTVSPE 115
Query: 202 LIFKILH--QKVVRKLAIDLKKAKVDSGPVLTKCD-----EFRDELLALGVQIKDQKCEA 254
L+ IL Q VR +KV G LT D + D +L +++D +A
Sbjct: 116 LLATILSSWQSYVR--------SKVSKG--LTPADIPGEGQEWDSWASLASKMQDATWKA 165
Query: 255 TWQFKDGK-----VFSDRVFISLPL------------------------YLILIQVSLLG 285
+D K + R +L + L L S G
Sbjct: 166 DCLKRDEKFDMHFTAATRARSALEVARGMLDNGFDTPDIAHQLIDEAADVLALSLDSQYG 225
Query: 286 PLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY 345
+ L F +E ++F+ M + V P TRV+E++P I ++++ ++ Y
Sbjct: 226 ATVTDPSISRSLAAF-WEQKFFDDMARLRVRQPDTLTRVTEYVPEIVTYVEQIVRNGYGY 284
Query: 346 IGSDHSVYFDVDSFPH-----YFKL--WGRNE---------NITQHAVKRSPFDFALWKS 389
D SVYFD F Y KL W + +++ +RS DFALWK+
Sbjct: 285 -AVDGSVYFDTHKFDQGKKHFYAKLEPWSKGNRELLEEGEGSLSSTGGRRSAADFALWKA 343
Query: 390 AKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFH 449
+KPGEP ++S WGKGRPGWHIECS MAS FG ++D+H+GGIDL FPHH+NE AQS A+H
Sbjct: 344 SKPGEPSWDSPWGKGRPGWHIECSVMASAIFGDKMDIHSGGIDLAFPHHDNEMAQSEAYH 403
Query: 450 NQSQWVNYWLHTGHL 464
WVNY+LHTGHL
Sbjct: 404 ECEAWVNYFLHTGHL 418
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 78/140 (55%), Gaps = 6/140 (4%)
Query: 17 CESPKWSLP-SGYDTGI-KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCN 74
P W+ P SG + + +YN +TKTK F+ N +KWY CGPTVYD+ H+GHA
Sbjct: 2 ASQPSWNPPTSGAEIPVLTVYNSLTKTKNEFVPSEGNRVKWYNCGPTVYDASHMGHARNY 61
Query: 75 VKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLPLIFKIL 132
V DI+RRI+ YF + ++TDIDDKII +A N L + ++T + L+ IL
Sbjct: 62 VTQDILRRIMTDYFGYDVHFVMNITDIDDKIILRARQNFLVQRFRTETQTVSPELLATIL 121
Query: 133 H--QKVVGSIPTRGHAVCNV 150
Q V S ++G ++
Sbjct: 122 SSWQSYVRSKVSKGLTPADI 141
>gi|171690590|ref|XP_001910220.1| hypothetical protein [Podospora anserina S mat+]
gi|170945243|emb|CAP71354.1| unnamed protein product [Podospora anserina S mat+]
Length = 780
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/361 (34%), Positives = 183/361 (50%), Gaps = 45/361 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA----------------NSL 187
GHA V DIIRRI+ YF + + TDIDDKII +A ++
Sbjct: 53 GHAKNYVSTDIIRRIMRDYFGFRVKFVMNTTDIDDKIILQARRQHLLARFKHQHAEEETV 112
Query: 188 KEDYKTVAKRYFLRLIFKIL----HQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLAL 243
E K FL+ + K L A ++ KA ++ + ++ D LL
Sbjct: 113 SETVLAEVKAAFLQYVGKNLPSLPGDMNPESFAEEVNKAYKET--LQSQSVTVEDLLLRA 170
Query: 244 GVQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYE 303
+ EA + F + L YL + + + + E + ++E
Sbjct: 171 HIGTAQLAAEALQNPETASEFFAKADDVLLPYLDALHGASIDSNN-HQIYLEL--SQKFE 227
Query: 304 LEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH-- 361
+FE M+ VLPP + TRV+E++ I F++ ++ Y D SVYFD+DSF
Sbjct: 228 RRFFEDMDALNVLPPDQLTRVTEYVRQIVDFVEKIVANGFGYATPDGSVYFDIDSFEKAG 287
Query: 362 --YFKL--WGRNE---------NITQHA-VKRSPFDFALWKSAKPGEPWYESAWGKGRPG 407
Y +L W +N+ ++++ A +KRSP FALWK++KPGEP ++S WG+GRPG
Sbjct: 288 HSYSRLEPWNKNDPALLADGEGSLSKGASMKRSPNHFALWKASKPGEPAWDSPWGRGRPG 347
Query: 408 WHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS----QWVNYWLHTGH 463
WHIECSAMAS G +D+H+GG+DL+FPHH+NE AQS A+ + QW NY++H G
Sbjct: 348 WHIECSAMASEAIGKTMDIHSGGVDLRFPHHDNELAQSEAYWSTPDCHVQWANYFIHMGQ 407
Query: 464 L 464
L
Sbjct: 408 L 408
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNH--LKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
+KIYN +T+TK FI + + WYACGPTVY+ H+GHA V DIIRRI+ YF
Sbjct: 14 LKIYNSLTRTKNDFIPVDPTGEVVTWYACGPTVYEDAHLGHAKNYVSTDIIRRIMRDYFG 73
Query: 90 IHSIVISSVTDIDDKIINKA 109
+ + TDIDDKII +A
Sbjct: 74 FRVKFVMNTTDIDDKIILQA 93
>gi|350639575|gb|EHA27929.1| hypothetical protein ASPNIDRAFT_211236 [Aspergillus niger ATCC
1015]
Length = 803
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/409 (32%), Positives = 192/409 (46%), Gaps = 52/409 (12%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPT------RGHAVCNVKLDIIRRILEHYFHIHSIVIS 171
T +K F+PL K K PT GHA V DI+RRIL YF +
Sbjct: 30 TRSKTPFVPLDPKGRKVKWYACGPTVYDDAHLGHARNYVSTDILRRILRDYFKFDVEFVM 89
Query: 172 SVTDIDD-------------KIINKANSLKEDYKTVAKRYFLRLIFKILH----QKVVRK 214
++TD+DD K I + ++ D A++ + I K L
Sbjct: 90 NITDVDDKIILRGRQQHLFNKYIAEHPTVTPDVLETARKAYSAYIKKNLPLVDPDTEPEN 149
Query: 215 LAIDLKK--AKVDSGPVLTKCDEFRDELLALGVQIK------DQKCEATWQFKDGKVFSD 266
+ +K V G L + D + + + IK EA + S
Sbjct: 150 FVAEAQKVYGVVLQGGALEADKKPGDAEVKIKMHIKTVTATTSAIAEAAQKLAGIDAASS 209
Query: 267 RVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNF--RYELEYFESMEKFGVLPPTRATRV 324
+ F + + + T+ E +YE + M VL P TRV
Sbjct: 210 KAFYDAAQDVFCFYLDVTEGSTIPGDAHEIFTKLTKKYEDHFMRDMRDLNVLDPDAVTRV 269
Query: 325 SEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP----HYFKL--WGRNEN------- 371
+E+ I F++ ++ K Y+ SD SVYFD+ +F HY +L W RN
Sbjct: 270 TEYGQQIADFVEKIVANKFGYVTSDGSVYFDIKAFEEAGNHYARLEPWNRNNQPLLRDGE 329
Query: 372 --ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTG 429
+++ K+S DFALWK+++PGEP + S WG+GRPGWHIECSAMAS G Q+D+H+G
Sbjct: 330 GALSRATEKKSSDDFALWKASRPGEPSWSSKWGQGRPGWHIECSAMASSCLGSQIDIHSG 389
Query: 430 GIDLKFPHHENEEAQSCAF--HNQSQWVNYWLHTGHL--RGTDGTRRLR 474
GIDL FPHH+NE AQS A+ ++ QWVNY+LH GHL +G+ ++ L+
Sbjct: 390 GIDLAFPHHDNELAQSEAYWCEHKQQWVNYFLHMGHLSIQGSKMSKSLK 438
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKN--HLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
+K++N +T++K PF+ + +KWYACGPTVYD H+GHA V DI+RRIL YF
Sbjct: 23 LKVWNSLTRSKTPFVPLDPKGRKVKWYACGPTVYDDAHLGHARNYVSTDILRRILRDYFK 82
Query: 90 IHSIVISSVTDIDDKII 106
+ ++TD+DDKII
Sbjct: 83 FDVEFVMNITDVDDKII 99
>gi|317035121|ref|XP_001401149.2| cysteinyl-tRNA synthetase [Aspergillus niger CBS 513.88]
Length = 804
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/409 (32%), Positives = 192/409 (46%), Gaps = 52/409 (12%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPT------RGHAVCNVKLDIIRRILEHYFHIHSIVIS 171
T +K F+PL K K PT GHA V DI+RRIL YF +
Sbjct: 30 TRSKTPFVPLDPKGRKVKWYACGPTVYDDAHLGHARNYVSTDILRRILRDYFKFDVEFVM 89
Query: 172 SVTDIDD-------------KIINKANSLKEDYKTVAKRYFLRLIFKILH----QKVVRK 214
++TD+DD K I + ++ D A++ + I K L
Sbjct: 90 NITDVDDKIILRGRQQHLFNKYIAEHPTVTPDVLETARKAYSAYIKKNLPLVDPDTEPEN 149
Query: 215 LAIDLKK--AKVDSGPVLTKCDEFRDELLALGVQIK------DQKCEATWQFKDGKVFSD 266
+ +K V G L + D + + + IK EA + S
Sbjct: 150 FVAEAQKVYGVVLQGGALEADKKPGDAEVKIKMHIKTVTATTSAIAEAAQKLAGIDAASS 209
Query: 267 RVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNF--RYELEYFESMEKFGVLPPTRATRV 324
+ F + + + T+ E +YE + M VL P TRV
Sbjct: 210 KAFYDAAQDVFCFYLDVTEGSTIPGDAHEIFTKLTKKYEDHFMRDMRDLNVLDPDAVTRV 269
Query: 325 SEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP----HYFKL--WGRNEN------- 371
+E+ I F++ ++ K Y+ SD SVYFD+ +F HY +L W RN
Sbjct: 270 TEYGQQIADFVEKIVANKFGYVTSDGSVYFDIKAFEEAGNHYARLEPWNRNNQPLLRDGE 329
Query: 372 --ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTG 429
+++ K+S DFALWK+++PGEP + S WG+GRPGWHIECSAMAS G Q+D+H+G
Sbjct: 330 GALSRATEKKSSDDFALWKASRPGEPSWSSKWGQGRPGWHIECSAMASSCLGSQIDIHSG 389
Query: 430 GIDLKFPHHENEEAQSCAF--HNQSQWVNYWLHTGHL--RGTDGTRRLR 474
GIDL FPHH+NE AQS A+ ++ QWVNY+LH GHL +G+ ++ L+
Sbjct: 390 GIDLAFPHHDNELAQSEAYWCEHKQQWVNYFLHMGHLSIQGSKMSKSLK 438
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKN--HLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
+K++N +T++K PF+ + +KWYACGPTVYD H+GHA V DI+RRIL YF
Sbjct: 23 LKVWNSLTRSKTPFVPLDPKGRKVKWYACGPTVYDDAHLGHARNYVSTDILRRILRDYFK 82
Query: 90 IHSIVISSVTDIDDKII 106
+ ++TD+DDKII
Sbjct: 83 FDVEFVMNITDVDDKII 99
>gi|145344518|ref|XP_001416778.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577004|gb|ABO95071.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 746
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/356 (35%), Positives = 175/356 (49%), Gaps = 57/356 (16%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V D++RR++ YF + +VTDIDDKII +A++ + + A R
Sbjct: 82 GHARNYVNFDVLRRVMMEYFGYDVRFVMNVTDIDDKIIMRAHTRRAEAVVKAARETGETR 141
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEAT-WQFKDGK 262
V + LA K T + + A+G I + C A W +DG
Sbjct: 142 LGAETLAVEKLLAEGGKPLGALDSATRTLANAVK---AAIGSGIDAEHCCAKDWTIQDG- 197
Query: 263 VFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRAT 322
YL L ++E E+ E M+ GV P T
Sbjct: 198 ------------YLTLAH--------------------QFEAEFMEDMKSLGVARPDMLT 225
Query: 323 RVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP----HYFKLWGRN--ENITQ-- 374
RVSE++ + +IQ +++ AY S+ SVYFDV +F H + +N ENIT+
Sbjct: 226 RVSEYVDKVILYIQVIINKGFAY-ESNGSVYFDVKAFEAAENHKYGKLNQNAMENITEAM 284
Query: 375 ---------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVD 425
+ K+ FDF LWK +K GEP + S WG GRPGWHIECSAM S G VD
Sbjct: 285 DGEGALEAEKSEKKCDFDFVLWKMSKDGEPCWSSPWGMGRPGWHIECSAMCSDILGQSVD 344
Query: 426 LHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAAR-FIT 480
++ GGIDL FPHHEN+ AQS A ++ QWVN+++HTGHL DG + ++ + FIT
Sbjct: 345 INGGGIDLNFPHHENQLAQSEAHYDTEQWVNFFIHTGHLH-IDGLKMSKSLKNFIT 399
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 56/89 (62%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
+ N TKTKVPF + N + WY CGPTVYDS H+GHA V D++RR++ YF
Sbjct: 47 LLNTFTKTKVPFKPLSGNSVGWYICGPTVYDSAHVGHARNYVNFDVLRRVMMEYFGYDVR 106
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ +VTDIDDKII +A++ + + A R
Sbjct: 107 FVMNVTDIDDKIIMRAHTRRAEAVVKAAR 135
>gi|332031259|gb|EGI70793.1| Cysteinyl-tRNA synthetase, mitochondrial [Acromyrmex echinatior]
Length = 518
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 105/166 (63%), Gaps = 3/166 (1%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E E+F M K + P RV+++IP I FI+ L+ Y+ D SVYF+ +
Sbjct: 125 FETEFFADMNKLNIREPYLRCRVTDYIPQIIQFIEKLIAKGDGYVAPDGSVYFNTSKYNK 184
Query: 362 YFKLWG---RNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
Y KL N K+S DFALWK+AK EP ++S W GRPGWHIECSA+AS
Sbjct: 185 YGKLSTLVLDTVNDQNFVGKKSALDFALWKAAKENEPSWKSPWSYGRPGWHIECSAIAST 244
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG +D+H+GGIDL FPHHENEEAQSC +H+ QWVNYWLH GHL
Sbjct: 245 VFGNSIDIHSGGIDLAFPHHENEEAQSCCYHDVDQWVNYWLHCGHL 290
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 77/106 (72%)
Query: 18 ESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
+ P+W P G+ T + IYN ITK KVP I++ +N LKWY CGPTVYDS HIGHA +K
Sbjct: 20 DRPQWIKPVGHQTEVSIYNLITKCKVPLILKTQNILKWYICGPTVYDSAHIGHATTYIKS 79
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
DIIRRIL YF+I +++ +TDIDDKII ++N +D+KT+++ +
Sbjct: 80 DIIRRILSDYFNIDVLLVMGITDIDDKIIRRSNESGKDFKTLSRHF 125
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 12/99 (12%)
Query: 125 LPLIFK---ILHQKVVGSIPTR------GHAVCNVKLDIIRRILEHYFHIHSIVISSVTD 175
+PLI K IL + G PT GHA +K DIIRRIL YF+I +++ +TD
Sbjct: 45 VPLILKTQNILKWYICG--PTVYDSAHIGHATTYIKSDIIRRILSDYFNIDVLLVMGITD 102
Query: 176 IDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQKVVRK 214
IDDKII ++N +D+KT++ R+F F +++ +R+
Sbjct: 103 IDDKIIRRSNESGKDFKTLS-RHFETEFFADMNKLNIRE 140
>gi|156082812|ref|XP_001608890.1| cysteinyl-tRNA synthetase [Babesia bovis T2Bo]
gi|154796140|gb|EDO05322.1| cysteinyl-tRNA synthetase, putative [Babesia bovis]
Length = 662
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 125/185 (67%), Gaps = 24/185 (12%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF- 359
R+E E++E M GV PP TRVSEF+P I S+I+T++ AY +D SVYFD+D+F
Sbjct: 150 RWEHEFWEDMAALGVDPPNVITRVSEFLPEIISYIETIMKNGYAY-EADGSVYFDIDAFI 208
Query: 360 ---PH-YFKLWGRNEN--------------ITQHAVKRSPFDFALWKSAKPGEPWYESAW 401
H Y KL + N ++ H K+SP DFALWK AKPGEP++ S W
Sbjct: 209 GSDKHVYAKLEPNSYNDLCRITDGEGTLGEVSTH--KKSPRDFALWKKAKPGEPFWSSPW 266
Query: 402 GKGRPGWHIECSAMASHFFGGQ--VDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWL 459
G+GRPGWHIECSAM S+ FG +D+H+GGIDLKFPHH+NE AQS AF +++QWVNY+L
Sbjct: 267 GEGRPGWHIECSAMCSNVFGKDTIIDIHSGGIDLKFPHHDNEIAQSEAFSDRNQWVNYFL 326
Query: 460 HTGHL 464
H GHL
Sbjct: 327 HFGHL 331
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 72/121 (59%), Gaps = 4/121 (3%)
Query: 7 SSLALSYATSCESPKWSLPSG---YDTGIKIYNPIT-KTKVPFIIQNKNHLKWYACGPTV 62
+++A +S + +W++PS + TG+ + N + KV F+ +N + WY CGPTV
Sbjct: 31 ATMAELQESSAKLREWTVPSKDGKFRTGLLLRNSLAGDAKVEFVPENGRRINWYCCGPTV 90
Query: 63 YDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
YD+ H+GHA V D IR ILE YF+ ++ +VTDIDDKII +AN + +A R
Sbjct: 91 YDTAHLGHARTYVACDTIRSILERYFNYDVHLVINVTDIDDKIIQRANDEGCKFNELASR 150
Query: 123 Y 123
+
Sbjct: 151 W 151
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V D IR ILE YF+ ++ +VTDIDDKII +AN + +A R+
Sbjct: 97 GHARTYVACDTIRSILERYFNYDVHLVINVTDIDDKIIQRANDEGCKFNELASRW----- 151
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLA 242
+ D+ VD V+T+ EF E+++
Sbjct: 152 --------EHEFWEDMAALGVDPPNVITRVSEFLPEIIS 182
>gi|195485861|ref|XP_002091264.1| GE12334 [Drosophila yakuba]
gi|194177365|gb|EDW90976.1| GE12334 [Drosophila yakuba]
Length = 560
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 113/168 (67%), Gaps = 5/168 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E+ + M + V P + V+ +P I FIQ L+D KQAY+ D+SVYFDV +
Sbjct: 139 YEAEFRQDMSRLNVQPADVRSHVTTTMPVIIQFIQQLIDQKQAYVTPDNSVYFDVSKSQN 198
Query: 362 YFKLWG---RNENITQHAVKRSPFDFALWKSAKPG-EPWYESAWG-KGRPGWHIECSAMA 416
Y KL E + + ++KR+ DFALWK+ K G EP +E+ WG +GRPGWHIECSA+A
Sbjct: 199 YGKLENLGLSKEKLERGSIKRNSADFALWKARKSGSEPTWEAPWGGEGRPGWHIECSAIA 258
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FFG Q+D H GG+DL+FPHHENEEAQ CA + QWVNYWLHTG L
Sbjct: 259 GLFFGRQLDFHAGGLDLRFPHHENEEAQCCARYKTDQWVNYWLHTGQL 306
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 68/103 (66%)
Query: 21 KWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDII 80
KW P G TGI IYN + KVP I++N + WY CGPTVYDS H+GHA VK+DI+
Sbjct: 37 KWRKPVGQHTGINIYNHGLRQKVPLILRNPQMVTWYTCGPTVYDSAHLGHASTYVKVDIL 96
Query: 81 RRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+RIL YF I+ + ++TD+DDKII +A D++ +A+ Y
Sbjct: 97 QRILRDYFKINLVTAMNITDVDDKIIKRAQLAGLDWQKMARAY 139
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA VK+DI++RIL YF I+ + ++TD+DDKII +A D++ +A+ Y
Sbjct: 85 GHASTYVKVDILQRILRDYFKINLVTAMNITDVDDKIIKRAQLAGLDWQKMARAY 139
>gi|392594084|gb|EIW83409.1| cysteinyl-tRNA synthetase [Coniophora puteana RWD-64-598 SS2]
Length = 777
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/367 (36%), Positives = 187/367 (50%), Gaps = 50/367 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS--LKEDYK---TVAKRY 198
GHA V DI+RRI+ YF + ++TDIDDKII +A L E ++ T
Sbjct: 57 GHARNYVTQDILRRIVSDYFGYDVHFVMNITDIDDKIILRARQTFLLERFRKETTKLDSL 116
Query: 199 FLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIK-DQKC-EATW 256
+ ++ V+ K+A L + + P DEF D L L Q Q+C +
Sbjct: 117 LFQEVYNAWAAYVLDKVAKGLAE---NDKPYQGGEDEFWDGLPTLLAQSGWKQECLKRDE 173
Query: 257 QFKDGKVFSDRVFISLPLYLILIQV---SLLGPLTL----RTVVFEFLFN---------- 299
+F +DR F +L + SL G L R V+ L
Sbjct: 174 KFDMHVSAADRAFAALSKAKTRLDAGDSSLEGAHELIDESRDVLAPVLDGKHKTTVSDHS 233
Query: 300 -FR-----YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVY 353
FR +E +F+ M++ V P TRV+E++P I F++ ++ AY + SVY
Sbjct: 234 IFRSLSSYWEGRFFDDMKRLRVRDPDTLTRVTEYVPEIVEFVEGIIKNGYAY-ELEGSVY 292
Query: 354 FDVDSFP-----HYFKL--WGR-NENITQHAV--------KRSPFDFALWKSAKPGEPWY 397
F+ + F Y +L W + N+ + + +RSP DFALWK++KPGEP +
Sbjct: 293 FNTNVFDAAPNHDYARLEPWSKGNKELLEEGEGALGAKLGQRSPADFALWKASKPGEPSW 352
Query: 398 ESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNY 457
S WG GRPGWHIECS MAS G +D+H+GGIDL FPHH+NE AQS A+HN +WVNY
Sbjct: 353 PSPWGPGRPGWHIECSVMASAVLGDNMDIHSGGIDLAFPHHDNELAQSEAYHNCDRWVNY 412
Query: 458 WLHTGHL 464
+LHTGHL
Sbjct: 413 FLHTGHL 419
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 64/96 (66%), Gaps = 2/96 (2%)
Query: 16 SCESPKWSLPS--GYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
S + P WS+P+ + +K++N +TKTK F+ +N H+KWY CGPTVYD+ H+GHA
Sbjct: 2 SVQQPPWSIPTNQAEEPALKVFNSLTKTKTEFVPRNGRHVKWYNCGPTVYDASHMGHARN 61
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
V DI+RRI+ YF + ++TDIDDKII +A
Sbjct: 62 YVTQDILRRIVSDYFGYDVHFVMNITDIDDKIILRA 97
>gi|157167844|ref|XP_001662428.1| cysteinyl-tRNA synthetase [Aedes aegypti]
gi|108871286|gb|EAT35511.1| AAEL012329-PA, partial [Aedes aegypti]
Length = 526
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 121/193 (62%), Gaps = 2/193 (1%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E++ +++ V PP RV++ IP I +FI+ L+ AY SD SVYF+ ++P
Sbjct: 114 YEQEFWTDLQRLNVRPPDIKLRVTDHIPRIVAFIEQLIAKNYAYKSSDGSVYFETANYPQ 173
Query: 362 YFKLWG-RNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
Y KL E + K+S DFALWK+AKPGEP + S +G GRPGWHIECS +A+ F
Sbjct: 174 YGKLQNIPTEQQSSPESKKSAADFALWKAAKPGEPSWPSPFGLGRPGWHIECSTLATQIF 233
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAARFIT 480
G Q+D H GG+DL+FPHHENEEAQSC +H WV+YW+HTG L T ++ + T
Sbjct: 234 GRQLDFHAGGLDLRFPHHENEEAQSCCYHGVDDWVHYWIHTGQLHLEGQTHKMSKSLKNT 293
Query: 481 NLSGSTIG-YTRD 492
G +G Y+ D
Sbjct: 294 VSIGELMGKYSAD 306
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 29 DTGIKIYNPITKTKVPFIIQNKNHL-KWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHY 87
D I+IY+ + KVP + + + +Y CGPTVYDS HIGHA C V+LDI++RIL+ +
Sbjct: 19 DAAIRIYSCRFREKVPLQLPSPARITSFYTCGPTVYDSAHIGHASCYVRLDILQRILKDH 78
Query: 88 FHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
F + + ++TDIDDKII +A + + + +A+ Y
Sbjct: 79 FGLRLVTAMNITDIDDKIIRRAAEVGKPWTDIARHY 114
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 38/55 (69%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA C V+LDI++RIL+ +F + + ++TDIDDKII +A + + + +A+ Y
Sbjct: 60 GHASCYVRLDILQRILKDHFGLRLVTAMNITDIDDKIIRRAAEVGKPWTDIARHY 114
>gi|240277739|gb|EER41247.1| cysteinyl-tRNA synthetase [Ajellomyces capsulatus H143]
Length = 783
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 190/379 (50%), Gaps = 50/379 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS------------LKEDY 191
GHA V DI+RRI+ YF I ++TD+DDKII + + +D
Sbjct: 65 GHARNYVTNDILRRIMRDYFKFDVEFIMNITDVDDKIITRGRQHHFFTEFVNSHPIIDDE 124
Query: 192 KTVAKR----YFLRLIFKILHQKVV-RKLAIDLKK--AKVDSGPVLTKCDEFRDELLALG 244
T R FL +L + + + +K A + +G L ++ DE L
Sbjct: 125 VTKIVRSAFAAFLERNLPLLEAGLAPERYGEEAEKVYAAILNGAALDGSEKPGDEEAKLK 184
Query: 245 VQIKDQKCEATWQFK----DGKVFSDRVFISLPLYLILIQVSLLGPLTLR---TVVFEFL 297
++IK A K + S+ + + L+ S+ G ++R +F L
Sbjct: 185 MKIKTASSAANALTKVSSAKESILSETFYNDVQDVLLEYLDSIHGS-SIRGEDRSIFTKL 243
Query: 298 FNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVD 357
+YE + + + VL P TRV+E++P I SF++ ++ K Y+ SD SVYFD+
Sbjct: 244 TK-KYEDRFMQDVRDLNVLDPDTVTRVTEYMPEIVSFVERIVKHKFGYVTSDGSVYFDIT 302
Query: 358 SFPHYFKLWGRNENITQHAVK----------------RSPFDFALWKSAKPGEPWYESAW 401
+F + R E +H K RS DFALWK++K GEP + S W
Sbjct: 303 AFEAAGNSYARLEPWNRHDTKLHAEGEGALTKKTMEKRSAADFALWKASKAGEPSWPSPW 362
Query: 402 GKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS----QWVNY 457
G GRPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS A+ +++ WVNY
Sbjct: 363 GDGRPGWHIECSAMASAKLGEQMDIHSGGIDLAFPHHDNELAQSEAYWHETCAHDHWVNY 422
Query: 458 WLHTGHL--RGTDGTRRLR 474
+LH GHL +G+ ++ L+
Sbjct: 423 FLHMGHLSIQGSKMSKSLK 441
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 8/104 (7%)
Query: 14 ATSCESPKWSLPSGYDTG------IKIYNPITKTKVPFIIQNK--NHLKWYACGPTVYDS 65
+T+ + P W+ P + +KIYN +T++KVPF+ + + WYACGPTVYD
Sbjct: 2 STARQQPPWNQPQLHPESASRLPPLKIYNSLTRSKVPFVPLDPIGRKVTWYACGPTVYDD 61
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
H+GHA V DI+RRI+ YF I ++TD+DDKII +
Sbjct: 62 AHLGHARNYVTNDILRRIMRDYFKFDVEFIMNITDVDDKIITRG 105
>gi|302805410|ref|XP_002984456.1| hypothetical protein SELMODRAFT_180921 [Selaginella moellendorffii]
gi|300147844|gb|EFJ14506.1| hypothetical protein SELMODRAFT_180921 [Selaginella moellendorffii]
Length = 450
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 199/381 (52%), Gaps = 29/381 (7%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDID 177
+++ LP+ + I V S GHA V DI+RRILE +F + +VTD+D
Sbjct: 7 SISPALLLPVTWYICGPTVYDSSHI-GHARNYVTFDILRRILEDFFGYDVFYVMNVTDVD 65
Query: 178 DKIINKANSLKEDYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFR 237
DKII +A + D+ + + Y R+ K + + R D+ ++ S V K +
Sbjct: 66 DKIIKRA---RRDH--LLRMYLERV--KDPSENLKRYSDSDVLFFRLASVCVGQKA---K 115
Query: 238 DELLALGVQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFL 297
E L L + ++ + K G + D + L S L TV +
Sbjct: 116 QEELKLEKVRQAEEAFKLKRDKAGLMGDDGISHLLGDNADDFLASKLDDDLGHTVTDHGI 175
Query: 298 FNF---RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYF 354
+ RYE E+FE M+ GV PP TRV+++I I +++T++ AY D SVYF
Sbjct: 176 YRAHASRYEKEFFEDMKSLGVKPPDVITRVTDYISKIVKYVETIIANGYAY-EVDGSVYF 234
Query: 355 DVDSF--PHYFK-----------LWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAW 401
D ++F H + L +E + K++ DFALWK +K GEP+++S W
Sbjct: 235 DTEAFNTKHTYGKLNPAAVGCVGLASESETNFKTRNKKNNNDFALWKESKVGEPFWDSPW 294
Query: 402 GKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHT 461
G GRPGWHIECSAMAS G +D+H+GG DLKFPHH+NE AQ+ A+H+ SQWVNY+ H+
Sbjct: 295 GPGRPGWHIECSAMASDVIGEIIDIHSGGADLKFPHHDNELAQAEAYHSCSQWVNYFFHS 354
Query: 462 GHLRGTDGTRRLRAARFITNL 482
GHL +G + ++ + T +
Sbjct: 355 GHL-SVNGLKMSKSLKNFTTI 374
>gi|367029219|ref|XP_003663893.1| hypothetical protein MYCTH_2306123 [Myceliophthora thermophila ATCC
42464]
gi|347011163|gb|AEO58648.1| hypothetical protein MYCTH_2306123 [Myceliophthora thermophila ATCC
42464]
Length = 807
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 137/392 (34%), Positives = 183/392 (46%), Gaps = 59/392 (15%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRIL H+F + + TD+DDKII KA + E K
Sbjct: 42 GHARNYVSTDIIRRILMHHFGFKVNFVMNYTDVDDKIIIKARRKRLLELEKEKPYTPEQI 101
Query: 200 LRLIFKILHQKVVRKLAI---DLKKAKVDSGPVLTKCDEFRDELLALGV---QIKDQKCE 253
L+FK L + D + A +D L + D +LA G + K E
Sbjct: 102 RDLVFKAFRAYAESNLPLLTADGQSA-LDENNYLDRRDAAYGRVLAGGTLSGEGKPSDAE 160
Query: 254 ATWQ------------FKDGKVFSDRVFISLP----LYLILIQVSLLGPLTLRTVVFEFL 297
A + +D F + LP LY I S T T E
Sbjct: 161 AKVKMHLSNMDSAAKSLRDASGFDGAEEVLLPYLDSLYKETIDTSDQTIFTNLTQAMEKA 220
Query: 298 FNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVD 357
FN + M VLPP TRV+E++P I F++ ++ AY ++ SVYFD+
Sbjct: 221 FN--------DDMRALNVLPPDAVTRVTEYVPQIVKFVEQVMAKGFAY-EANGSVYFDIA 271
Query: 358 SFPHYFKLWGR------NENITQHAV----------KRSPFDFALWKSAKPGEPWYESAW 401
+F + R N+ Q K+ P DFALWK +KPGEP++ S W
Sbjct: 272 AFEKAGNTYARLRPESKNDKALQEEGEGSLSKSLEGKKRPGDFALWKKSKPGEPYWPSPW 331
Query: 402 GKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCA-FHN----QSQWVN 456
G GRPGWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A FH + WV
Sbjct: 332 GPGRPGWHIECSVMASDKLGEQMDIHSGGIDLAFPHHDNELAQSEAYFHECGKGEHTWVR 391
Query: 457 YWLHTGHLR--GTDGTRRLRAARFITNLSGST 486
Y+LH GHL G+ ++ L+ + I + +T
Sbjct: 392 YFLHMGHLSIAGSKMSKSLKNFQTIQDALATT 423
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 30 TGIKIYNPITK-TKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
GI ++N + VPF+ + + + WYACGPT YD H+GHA V DIIRRIL H+F
Sbjct: 2 AGITVHNSLKPGAPVPFVPREEGKVSWYACGPTTYDLSHLGHARNYVSTDIIRRILMHHF 61
Query: 89 HIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYFLPLIFKILHQKVVGSIP 141
+ + TD+DDKII KA + E K L+FK ++P
Sbjct: 62 GFKVNFVMNYTDVDDKIIIKARRKRLLELEKEKPYTPEQIRDLVFKAFRAYAESNLP 118
>gi|225557189|gb|EEH05476.1| cysteinyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
Length = 806
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/376 (32%), Positives = 192/376 (51%), Gaps = 47/376 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKI----------INKANSLKEDYKT 193
GHA V DI+RRI+ YF I ++TD+DDK+ +N + ++
Sbjct: 65 GHARNYVTNDILRRIMRDYFKFDVEFIMNITDVDDKVGRQHHFFTEFVNSHPIIDDEVTK 124
Query: 194 VAKRYFLRLIFK---ILHQKVV-RKLAIDLKK--AKVDSGPVLTKCDEFRDELLALGVQI 247
+ + F + + +L ++ + + +K A + +G L ++ DE L ++I
Sbjct: 125 IVRSAFAAFLERNLPLLEARLAPERYGEEAEKVYAAILNGAALDGSEKPGDEEAKLKMKI 184
Query: 248 KDQKCEATWQFK----DGKVFSDRVFISLPLYLILIQVSLLGPLTLR---TVVFEFLFNF 300
K A K + S+ + + L+ S+ G ++R +F L
Sbjct: 185 KTASSAANALTKVSSTKESILSETFYNDVQDVLLEYLDSIHGS-SIRGEDRSIFTKLTK- 242
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+YE + + + VL P TRV+E++P I SF++ ++ K Y+ SD SVYFD+ +F
Sbjct: 243 KYEDRFMQDVRDLNVLDPDTVTRVTEYMPEIVSFVERIVKHKFGYVTSDGSVYFDITAFE 302
Query: 361 HYFKLWGRNENITQHAVK----------------RSPFDFALWKSAKPGEPWYESAWGKG 404
+ R E +H K RS DFALWK++K GEP + S WG G
Sbjct: 303 AAGNSYARLEPWNRHDTKLHAEGEGALTKKTMEKRSAADFALWKASKAGEPSWPSPWGDG 362
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS----QWVNYWLH 460
RPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS A+ +++ WVNY+LH
Sbjct: 363 RPGWHIECSAMASAKLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHETCAHGHWVNYFLH 422
Query: 461 TGHL--RGTDGTRRLR 474
GHL +G+ ++ L+
Sbjct: 423 MGHLSIQGSKMSKSLK 438
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 8/100 (8%)
Query: 14 ATSCESPKWSLPSGYDTG------IKIYNPITKTKVPFIIQNK--NHLKWYACGPTVYDS 65
+T+ + P W+ P + +KIYN +T++KVPF+ + + WYACGPTVYD
Sbjct: 2 STARQQPPWNQPQLHPESASRLPPLKIYNSLTRSKVPFVPLDPIGRKVTWYACGPTVYDD 61
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKI 105
H+GHA V DI+RRI+ YF I ++TD+DDK+
Sbjct: 62 AHLGHARNYVTNDILRRIMRDYFKFDVEFIMNITDVDDKV 101
>gi|291234575|ref|XP_002737225.1| PREDICTED: cysteinyl-tRNA synthetase-like [Saccoglossus
kowalevskii]
Length = 739
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 133/378 (35%), Positives = 188/378 (49%), Gaps = 70/378 (18%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA DI+RRIL YF+ + ++TDIDDKII +A N L E+YK +
Sbjct: 62 GHARSLHIFDILRRILSEYFNYDVVYCMNITDIDDKIIRRARQNYLYEEYKKTVQCPMKL 121
Query: 202 L-----IFKILHQKVVRKLAIDLKK------AKVDSGPVLTK----CDEFRDELLALGVQ 246
L K+ +K++ + D K KV+ G K D +D + V
Sbjct: 122 LQDVQPAVKVYQEKLLNETDPDKKTMLEKILKKVEDGVTKLKQYLNNDSSQDNSVIQKVL 181
Query: 247 IKDQKCEATW-QFKDG-KVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYEL 304
+ A W K G +V + +F LP Y +E
Sbjct: 182 EDSRDVLADWLDAKSGHEVTDNSIFSLLPKY--------------------------WEE 215
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH--- 361
EY M VLP TRVS++IP + +++ ++D Y+ S+ SVYF V +F +
Sbjct: 216 EYHRDMASINVLPADVLTRVSDYIPEVVEYVKKIIDNGYGYV-SNGSVYFSVSTFDNDPN 274
Query: 362 --YFKL------------WGRNE-NITQHAV--KRSPFDFALWKSAKPGEPWYESAWGKG 404
Y KL G + +I+Q + K+S DFA+WK +KPGEP ++S WGKG
Sbjct: 275 HSYAKLVPEAVGDCKALEEGEGDLSISQDRLDEKKSQVDFAVWKKSKPGEPAWDSPWGKG 334
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
RPGWHIECS MAS G +D+HTGG DL+FPHH+NE AQ+ A++ WV Y+LH+GHL
Sbjct: 335 RPGWHIECSVMASCILGESLDIHTGGFDLRFPHHDNELAQAEAYYGNDHWVRYFLHSGHL 394
Query: 465 --RGTDGTRRLRAARFIT 480
+G ++ L+ FIT
Sbjct: 395 TIQGCKMSKSLK--NFIT 410
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
Query: 20 PKWSLPSG-YDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W P+G ++ + +YN +T+ + FI QN + WY+CGPTVYD+ H+GHA D
Sbjct: 12 PAWQAPTGSKNSQLYLYNSLTRQRELFIPQNGKQVLWYSCGPTVYDASHMGHARSLHIFD 71
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAK 121
I+RRIL YF+ + ++TDIDDKII +A N L E+YK +
Sbjct: 72 ILRRILSEYFNYDVVYCMNITDIDDKIIRRARQNYLYEEYKKTVQ 116
>gi|390602136|gb|EIN11529.1| hypothetical protein PUNSTDRAFT_131692 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 781
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 134/368 (36%), Positives = 191/368 (51%), Gaps = 51/368 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYK---TVAKRY 198
GHA V D++RRI+ YF + +VTDIDDKII +A N L E + TV
Sbjct: 59 GHARNYVTQDVLRRIMTDYFGYDVHFVMNVTDIDDKIILRARQNHLIEQLRERTTVLTPS 118
Query: 199 FLRLIFK-----ILHQKVVRKL-AIDLKK--AKVDSGPVLTKCDEFRDELLALGVQIKDQ 250
F+ + IL +K+ + L A DL + +S P L + F D+ +D+
Sbjct: 119 FVNETRESWAAFILSKKLSKGLPAEDLPAPGKEAESWPSLVQ--RFNDKNWRAEGLKRDE 176
Query: 251 KCEATWQ---------------FKDGKVFSDRVFISLPLYLILIQVSL---LGPLTLRTV 292
K E + K G + + ++ +SL G
Sbjct: 177 KFEMNFNSANRTFNAIAAAESALKSGDTSQEAAHRLIEEAKDVLAISLDQQYGASVTDPS 236
Query: 293 VFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSV 352
+F L + +E ++F M + V P TRVSE++P +F++ ++ AY +D SV
Sbjct: 237 IFRKLAAY-WEDQFFNDMRRLRVRDPDTLTRVSEYVPENVAFVEKIIQNGYAY-EADGSV 294
Query: 353 YFDVDSFP-----HYFKL--WGR-NENITQH-----AVK---RSPFDFALWKSAKPGEPW 396
+FDV++F Y K+ W + NE++ +VK +S DFALWKS+KPGEP
Sbjct: 295 WFDVEAFDGKNGHEYAKIEPWSKGNEDLRAEGEGALSVKSKTKSKADFALWKSSKPGEPS 354
Query: 397 YESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVN 456
+ S WG GRPGWH+ECS MAS G ++D+H+GGIDL FPHH+NE AQS A+HN WVN
Sbjct: 355 WPSPWGPGRPGWHLECSVMASAVLGPKIDIHSGGIDLAFPHHDNELAQSEAYHNCGSWVN 414
Query: 457 YWLHTGHL 464
Y+LHTGHL
Sbjct: 415 YFLHTGHL 422
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 14 ATSCESPKWSLPS--GYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHA 71
A+S W+ P+ + +K+YN +T++K FI ++ H+KWY CGPTVYDS H+GHA
Sbjct: 2 ASSSYQSSWTPPTRRTEEPVLKVYNSLTRSKTDFIPEDGRHVKWYNCGPTVYDSSHMGHA 61
Query: 72 VCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
V D++RRI+ YF + +VTDIDDKII +A
Sbjct: 62 RNYVTQDVLRRIMTDYFGYDVHFVMNVTDIDDKIILRA 99
>gi|239612172|gb|EEQ89159.1| cysteinyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
Length = 801
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 192/376 (51%), Gaps = 52/376 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDK-----IINKANSLKEDYKTVAKRY 198
GHA V DI+RRI+ YF I ++TD+DDK + ++ + +A
Sbjct: 65 GHARNYVSNDILRRIMRDYFKFDVKFIMNITDVDDKHFFTEFVYSHPTVDDKVIEIALSA 124
Query: 199 FLRLIFKIL-----------HQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQI 247
+ + K L +Q V K+ A + +G L + D+ L + I
Sbjct: 125 YSAYLEKKLPLLEAGLAPERYQDEVEKVY-----ATILNGGALDGNGKPGDDEAKLKMHI 179
Query: 248 KDQKCEATWQFK----DGKVFSDRVFISLPLYLILIQVSLLGPLTLR---TVVFEFLFNF 300
K A K + + S+ + + L+ S+ G ++R ++F L
Sbjct: 180 KTASSAANALAKVSSAEESILSESFYNDVKDVLLEYLDSVHGS-SIRGEDRLIFTKLAK- 237
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+YE + + + VL P TRV+E++P I SF++ ++D K Y+ SD SVYFD+ +F
Sbjct: 238 KYETRFMQDVRDLNVLDPDAITRVTEYMPEIVSFVERIIDHKFGYVTSDGSVYFDITAFE 297
Query: 361 ----HYFKL--WGRNENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWGKG 404
Y +L W RN+ Q KRS DFALWK++K GEP + S WG G
Sbjct: 298 ASGNSYARLEPWNRNDTKLQAEGEGALTKKTTEKRSAADFALWKASKAGEPSWPSPWGDG 357
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS----QWVNYWLH 460
RPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS A+ +++ WVNY+LH
Sbjct: 358 RPGWHIECSAMASAKLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHETCADHHWVNYFLH 417
Query: 461 TGHL--RGTDGTRRLR 474
GHL +G+ ++ L+
Sbjct: 418 MGHLSIQGSKMSKSLK 433
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 128/295 (43%), Gaps = 46/295 (15%)
Query: 14 ATSCESPKWSLPSGYDTG------IKIYNPITKTKVPFIIQNKNH--LKWYACGPTVYDS 65
+T+ + P W+ P + +KIYN +T++KVPF+ + + + WYACGPTVYD
Sbjct: 2 STARQQPPWNQPKPHPESASRLPPLKIYNSLTRSKVPFVPLDPSGRTVTWYACGPTVYDD 61
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDK------------IINKANSLK 113
H+GHA V DI+RRI+ YF I ++TD+DDK + +K +
Sbjct: 62 AHLGHARNYVSNDILRRIMRDYFKFDVKFIMNITDVDDKHFFTEFVYSHPTVDDKVIEIA 121
Query: 114 EDYKTVAKRYFLPLIFKILH--------QKVVGSIPTRGHAVCNVKLDIIRRILEHYFHI 165
+ LPL+ L +KV +I G N K L+ +
Sbjct: 122 LSAYSAYLEKKLPLLEAGLAPERYQDEVEKVYATILNGGALDGNGKPGDDEAKLKMHIKT 181
Query: 166 HSI---VISSVTDIDDKIINKANSLKEDYKTVAKRYF-----------LRLIFKILHQKV 211
S ++ V+ ++ I+++ S D K V Y RLIF L +K
Sbjct: 182 ASSAANALAKVSSAEESILSE--SFYNDVKDVLLEYLDSVHGSSIRGEDRLIFTKLAKKY 239
Query: 212 VRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGKVFSD 266
+ D++ V +T+ E+ E+++ +I D K + DG V+ D
Sbjct: 240 ETRFMQDVRDLNVLDPDAITRVTEYMPEIVSFVERIIDHKF--GYVTSDGSVYFD 292
>gi|332024052|gb|EGI64270.1| Cysteinyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
Length = 732
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 131/352 (37%), Positives = 184/352 (52%), Gaps = 55/352 (15%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+ YF + + ++TDIDDKII +A N L E Y V + + L
Sbjct: 57 GHARSYISFDIL------YFGYDILYVMNITDIDDKIIKRARQNYLYEKY--VEENHSLN 108
Query: 202 LIFKILHQ------KVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEAT 255
I + + VVR + KK ++ +L K ++L V+ KD+K
Sbjct: 109 SILDDVKEVMSNFENVVRTTSSADKKCMLEQ--MLYKITRTIEDLQK-AVKEKDEK--KI 163
Query: 256 WQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNF---RYELEYFESMEK 312
+F+D + + PL L + T+ +FN +E E+ + M+
Sbjct: 164 IRFQDALLKEAKD----PL------ADWLDKIKGSTITEHSIFNKISKHWEAEFHKDMDA 213
Query: 313 FGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH-----YFKL-- 365
+L P TRVSE++ I +FIQ ++D AY S+ SVYFDVD F Y KL
Sbjct: 214 LNILKPNVLTRVSEYVEEIITFIQQIIDNGYAY-ESNGSVYFDVDKFDKQEKHSYAKLVP 272
Query: 366 --WGRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
+G ++ + + K+S DFALWK +K GEPW+ES WG+GRPGWHIEC
Sbjct: 273 EAYGDTSSLEEGEGDLSTTADKLSEKKSVTDFALWKCSKAGEPWWESPWGRGRPGWHIEC 332
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
S MAS G +D+HTGG+DLKFPHH+NE AQ+ A N S WV Y+LH+GHL
Sbjct: 333 SVMASAICGESLDIHTGGVDLKFPHHDNELAQAEACFNNSHWVRYFLHSGHL 384
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 9/100 (9%)
Query: 20 PKWSLPSGYDTGI-KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P W LP D + ++YN +T+ K F+ Q N + WY+CGPTVYD+ H+GHA + D
Sbjct: 7 PTWHLPDRKDAMVLRLYNSLTREKEIFVPQFGNRVLWYSCGPTVYDASHMGHARSYISFD 66
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY 116
I+ YF + + ++TDIDDKII +A N L E Y
Sbjct: 67 IL------YFGYDILYVMNITDIDDKIIKRARQNYLYEKY 100
>gi|66475306|ref|XP_627469.1| cysteinyl-tRNA synthetase [Cryptosporidium parvum Iowa II]
gi|32398684|emb|CAD98644.1| cysteinyl-tRNA-synthetase, possible [Cryptosporidium parvum]
gi|46229332|gb|EAK90181.1| cysteinyl-tRNA synthetase [Cryptosporidium parvum Iowa II]
gi|323508907|dbj|BAJ77346.1| cgd6_960 [Cryptosporidium parvum]
gi|323510143|dbj|BAJ77965.1| cgd6_960 [Cryptosporidium parvum]
Length = 581
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 121/181 (66%), Gaps = 18/181 (9%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+ELE+F+ M+ V P TRVSEFIP I FI T++ AY S+ SVYFDV+SF
Sbjct: 131 EFELEFFDDMKALNVKMPDVVTRVSEFIPEIIDFISTIISRGFAY-ESEGSVYFDVESFR 189
Query: 361 HYFK-LWGRNE---------------NITQH-AVKRSPFDFALWKSAKPGEPWYESAWGK 403
K ++GR E + +H K+SP DFALWK AKP EP ++S WGK
Sbjct: 190 ADEKHVYGRMEPKSVADVNRVLEGEGELGEHLKDKKSPLDFALWKKAKPEEPCWDSPWGK 249
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGH 463
GRPGWHIECS MAS+ G +D+H+GGIDL+FPHH+NE AQS A ++Q+QWVNY+LH+GH
Sbjct: 250 GRPGWHIECSVMASNTLGFPIDIHSGGIDLRFPHHDNELAQSEAHYDQAQWVNYFLHSGH 309
Query: 464 L 464
L
Sbjct: 310 L 310
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 11 LSYATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGH 70
S A S ++ S Y TG+ + N +T + FI N + WYACGPTVYDS H+GH
Sbjct: 19 FSNAESGDTSSASKRCSYSTGLMLNNSMTGGRTEFIPVNGRRVNWYACGPTVYDSAHLGH 78
Query: 71 AVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK-EDYKTVAKRYFLPLI- 128
A V DIIRR+LE YF ++ ++TDIDDKII ++N K E++ +A+ + L
Sbjct: 79 ARNYVTFDIIRRVLEDYFGYDVYLVMNITDIDDKIIKRSNEQKRENFLDLAREFELEFFD 138
Query: 129 -FKILHQKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHS 167
K L+ K + + TR +D I I+ F S
Sbjct: 139 DMKALNVK-MPDVVTRVSEFIPEIIDFISTIISRGFAYES 177
>gi|261202288|ref|XP_002628358.1| cysteinyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
gi|239590455|gb|EEQ73036.1| cysteinyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
Length = 801
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 192/376 (51%), Gaps = 52/376 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDK-----IINKANSLKEDYKTVAKRY 198
GHA V DI+RRI+ YF I ++TD+DDK + ++ + +A
Sbjct: 65 GHARNYVSNDILRRIMRDYFKFDVKFIMNITDVDDKHFFTEFVYSHPTVDDKVIEIALSA 124
Query: 199 FLRLIFKIL-----------HQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQI 247
+ + K L +Q V K+ A + +G L + D+ L + I
Sbjct: 125 YSAYLEKKLPLLEAGLAPERYQDEVEKVY-----ATILNGGALDGNGKPGDDEAKLKMHI 179
Query: 248 KDQKCEATWQFK----DGKVFSDRVFISLPLYLILIQVSLLGPLTLR---TVVFEFLFNF 300
K A K + + S+ + + L+ S+ G ++R ++F L
Sbjct: 180 KTASSAANALAKVSSAEESILSETFYNDVKDVLLEYLDSVHGS-SIRGEDRLIFTKLAK- 237
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+YE + + + VL P TRV+E++P I SF++ ++D K Y+ SD SVYFD+ +F
Sbjct: 238 KYEARFMQDVRDLNVLDPDAITRVTEYMPEIVSFVERIIDHKFGYVTSDGSVYFDITAFE 297
Query: 361 ----HYFKL--WGRNENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWGKG 404
Y +L W RN+ Q KRS DFALWK++K GEP + S WG G
Sbjct: 298 ASGNSYARLEPWNRNDTKLQAEGEGALTKKTTEKRSAADFALWKASKAGEPSWPSPWGDG 357
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS----QWVNYWLH 460
RPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS A+ +++ WVNY+LH
Sbjct: 358 RPGWHIECSAMASAKLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHETCADHHWVNYFLH 417
Query: 461 TGHL--RGTDGTRRLR 474
GHL +G+ ++ L+
Sbjct: 418 MGHLSIQGSKMSKSLK 433
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 8/99 (8%)
Query: 14 ATSCESPKWSLPSGYDTG------IKIYNPITKTKVPFIIQNKNH--LKWYACGPTVYDS 65
+T+ E P W+ P + +KIYN +T++KVPF+ + + + WYACGPTVYD
Sbjct: 2 STAREQPPWNQPKPHPESASRLPPLKIYNSLTRSKVPFVPLDPSGRTVTWYACGPTVYDD 61
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDK 104
H+GHA V DI+RRI+ YF I ++TD+DDK
Sbjct: 62 AHLGHARNYVSNDILRRIMRDYFKFDVKFIMNITDVDDK 100
>gi|347832578|emb|CCD48275.1| similar to cysteinyl-tRNA synthetase [Botryotinia fuckeliana]
Length = 734
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 137/392 (34%), Positives = 190/392 (48%), Gaps = 54/392 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRI++ YF + ++TD+DDKII KA K E KT +
Sbjct: 42 GHARNYVSTDIIRRIMKDYFGFDLNFVMNITDVDDKIILKARRQKLLELEKSKTYTEPEL 101
Query: 200 LRLIFKILHQKVVRKLAI-----------------DLKKAKVDSGPVLTKCDEFRDELLA 242
+L + L D+ KV +G LT + D
Sbjct: 102 AKLAAEAFQSYATANLPELLKDGTQLTPSNYAERRDIAYGKVLAGGTLTGEGKPGDAEAK 161
Query: 243 LGVQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPL-TLRTVVFEFLFNFR 301
+ + I + A + K+F I LP L + S+ T+ T V ++
Sbjct: 162 MKMHISNLSS-AAQAIQQEKIFGGADEILLPYLDSLYKDSIDAKDHTIFTNVTQY----- 215
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E ++ E M+ V+ P TRV+ ++P I F++ ++D AY SD SVYFD+ +F
Sbjct: 216 WEDQFMEDMDALNVMRPDVITRVTTYVPKIAIFVKKIIDKGFAY-ESDGSVYFDIAAFEK 274
Query: 362 ----YFKL--WGRNENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWGKGR 405
Y +L RN+ Q KR DFALWK +K GEP + S WG+GR
Sbjct: 275 AGNPYARLRPESRNDKALQEEGEGSLSKNLGGKRGAGDFALWKKSKAGEPSWPSPWGEGR 334
Query: 406 PGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF---HNQS--QWVNYWLH 460
PGWHIECS MAS G ++D+H+GGIDL FPHH+NE AQS A+ H Q +WVNY+LH
Sbjct: 335 PGWHIECSVMASDVLGSKMDIHSGGIDLAFPHHDNELAQSEAYFCEHEQGPHEWVNYFLH 394
Query: 461 TGHLR--GTDGTRRLRAARFITNLSGSTIGYT 490
GHL G+ ++ L+ F T T YT
Sbjct: 395 MGHLSIAGSKMSKSLK--NFQTIRDALTTDYT 424
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 32 IKIYNPITKTK-VPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+K++N + VPF+ K + WY CGPTVYD H+GHA V DIIRRI++ YF
Sbjct: 4 LKVHNSLKPGGPVPFVPIEKGKVSWYVCGPTVYDHSHLGHARNYVSTDIIRRIMKDYFGF 63
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKI 131
+ ++TD+DDKII KA K +K Y P + K+
Sbjct: 64 DLNFVMNITDVDDKIILKARRQKLLELEKSKTYTEPELAKL 104
>gi|195122364|ref|XP_002005681.1| GI18944 [Drosophila mojavensis]
gi|193910749|gb|EDW09616.1| GI18944 [Drosophila mojavensis]
Length = 537
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 111/172 (64%), Gaps = 12/172 (6%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y+ E+ E+M + V PP VS IP IQ FI+ L++ +QAY+ D SVYFDV +
Sbjct: 118 YDAEFKENMLRLNVKPPNMRAHVSANIPVIQRFIEQLIENQQAYVAEDKSVYFDVSKCQN 177
Query: 362 YFKL-------WGRNENITQHAVKRSPFDFALWKSAKPG-EPWYESAWG-KGRPGWHIEC 412
Y KL W EN KRS DFALWK+ K EP + S WG +GRPGWHIEC
Sbjct: 178 YGKLQNISKEEWALQEN---EQGKRSAADFALWKAKKAKYEPSWSSKWGGEGRPGWHIEC 234
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
SA+A FFG ++D H GG+DL+FPHHENEEAQ CA ++QWVNYWLHTG L
Sbjct: 235 SAIAGMFFGEELDFHAGGLDLRFPHHENEEAQCCAHFKKNQWVNYWLHTGQL 286
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 85/155 (54%), Gaps = 3/155 (1%)
Query: 7 SSLALSYATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSP 66
+S + S T + W P G TGI IYN + KVP +++N + + WY CGPTVYD
Sbjct: 2 NSNSSSKPTQTFANSWQRPCGEYTGINIYNHRVRGKVPLVLRNPHMVTWYTCGPTVYDKT 61
Query: 67 HIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLP 126
H+GHA VK+DII+RIL YF + I ++TD+DDKII ++ +++ +A+ Y
Sbjct: 62 HVGHASTYVKVDIIQRILRDYFKYNLITAMNITDVDDKIITRSKEQGRNWQELARTYDAE 121
Query: 127 LIFKILHQKVVGSIPTRGHAVCNVKLDIIRRILEH 161
+L V P A + + +I+R +E
Sbjct: 122 FKENMLRLNVK---PPNMRAHVSANIPVIQRFIEQ 153
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA VK+DII+RIL YF + I ++TD+DDKII ++ +++ +A+ Y
Sbjct: 64 GHASTYVKVDIIQRILRDYFKYNLITAMNITDVDDKIITRSKEQGRNWQELARTY 118
>gi|322694236|gb|EFY86071.1| cysteinyl-tRNA synthetase [Metarhizium acridum CQMa 102]
Length = 799
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 187/387 (48%), Gaps = 50/387 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKAN-------SLKEDYKTVAK 196
GHA V DIIRRI+ HYF + + ++TD+DDKII KA K+ Y
Sbjct: 42 GHARNYVASDIIRRIMMHYFGFNVKYVMNMTDVDDKIIIKARRQRLLDLEKKKQYSEDEL 101
Query: 197 RYFLRLIFKILHQKVVRKLAIDLKK--------------AKVDSGPVLTKCDEFRDELLA 242
R F+ K + L D + V SG LT + D+
Sbjct: 102 RNLGLAAFRAYASKNLPLLTKDTSQLDETNYTTQRDAAYGPVLSGGTLTGEGKPGDDEAK 161
Query: 243 LGVQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRY 302
+ + + + A K +F + LP YL + + T +F L R
Sbjct: 162 IKMHVGNMDAAAE-ALKQNAIFPGADEVLLP-YLDSLHKETID--TSDQSIFTDLTK-RM 216
Query: 303 ELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHY 362
E + E M+ VL P TRV+E++P I F++ ++D AY ++ SVYFD+ +F
Sbjct: 217 EAVFLEDMDNLNVLRPDVITRVTEYMPQIAKFVEQIVDKGFAY-EAEGSVYFDIAAFQKA 275
Query: 363 FKLWGR------NENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRP 406
+ R N+ Q KR DFALWK +K GEP++ S WG GRP
Sbjct: 276 GNTYARLRPDSKNDKALQEEGEGSLSTNLGGKRGAGDFALWKKSKAGEPYWPSKWGDGRP 335
Query: 407 GWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF---HNQSQ--WVNYWLHT 461
GWHIECS MAS G ++D+H+GG+DL FPHH+NE AQS A+ H + + WVNY+LH
Sbjct: 336 GWHIECSVMASDVLGSRMDVHSGGVDLAFPHHDNELAQSEAYFCQHGKGEHTWVNYFLHM 395
Query: 462 GHL--RGTDGTRRLRAARFITNLSGST 486
GHL G+ ++ L+ + I++ +T
Sbjct: 396 GHLSISGSKMSKSLKNFQTISDALATT 422
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 32 IKIYNPITKTK-VPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+K++N + VPF+ + WYACGPTVYD H+GHA V DIIRRI+ HYF
Sbjct: 4 LKVHNSLKPGPPVPFVPMEPGKVSWYACGPTVYDKSHLGHARNYVASDIIRRIMMHYFGF 63
Query: 91 HSIVISSVTDIDDKIINKA 109
+ + ++TD+DDKII KA
Sbjct: 64 NVKYVMNMTDVDDKIIIKA 82
>gi|325093822|gb|EGC47132.1| cysteinyl-tRNA synthetase [Ajellomyces capsulatus H88]
Length = 806
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 124/376 (32%), Positives = 190/376 (50%), Gaps = 47/376 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKI----------INKANSLKEDYKT 193
GHA V DI+RRI+ YF I ++TD+DDK+ +N + ++
Sbjct: 65 GHARNYVTNDILRRIMRDYFKFDVEFIMNITDVDDKVGRQHHFFTEFVNSHPVIDDEVTK 124
Query: 194 VAKRYFLRLIFKIL----HQKVVRKLAIDLKK--AKVDSGPVLTKCDEFRDELLALGVQI 247
+ + F + + L + + + +K A + +G L ++ DE L ++I
Sbjct: 125 IVRSAFAAFLERNLPLLEAELAPERYREETEKVYAAILNGAALDGSEKPGDEEAKLKMKI 184
Query: 248 KDQKCEATWQFK----DGKVFSDRVFISLPLYLILIQVSLLGPLTLR---TVVFEFLFNF 300
K A K + S+ + + L+ S+ G ++R +F L
Sbjct: 185 KTASSAANALTKVSSAKESILSETFYNDVQDVLLEYLDSIHGS-SIRGEDRSIFTKLTK- 242
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+YE + + + VL P TRV+E++P I SF++ ++ K Y+ SD SVYFD+ +F
Sbjct: 243 KYEDRFMQDVRDLNVLDPDTVTRVTEYMPEIVSFVERIVKHKFGYVTSDGSVYFDITAFE 302
Query: 361 HYFKLWGRNENITQHAVK----------------RSPFDFALWKSAKPGEPWYESAWGKG 404
+ R E +H K RS DFALWK++K GEP + S WG G
Sbjct: 303 AAGNSYARLEPWNRHDTKLHAEGEGALTKKTMEKRSAADFALWKASKAGEPSWPSPWGDG 362
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS----QWVNYWLH 460
RPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS A+ +++ WVNY+LH
Sbjct: 363 RPGWHIECSAMASAKLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHETCAHDHWVNYFLH 422
Query: 461 TGHL--RGTDGTRRLR 474
GHL +G+ ++ L+
Sbjct: 423 MGHLSIQGSKMSKSLK 438
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 8/100 (8%)
Query: 14 ATSCESPKWSLPSGYDTG------IKIYNPITKTKVPFIIQNK--NHLKWYACGPTVYDS 65
+T+ + P W+ P + +KIYN +T++KVPF+ + + WYACGPTVYD
Sbjct: 2 STARQQPPWNQPQLHPESASRLPPLKIYNSLTRSKVPFVPLDPIGRKVTWYACGPTVYDD 61
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKI 105
H+GHA V DI+RRI+ YF I ++TD+DDK+
Sbjct: 62 AHLGHARNYVTNDILRRIMRDYFKFDVEFIMNITDVDDKV 101
>gi|154312989|ref|XP_001555821.1| hypothetical protein BC1G_05496 [Botryotinia fuckeliana B05.10]
Length = 796
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 137/392 (34%), Positives = 190/392 (48%), Gaps = 54/392 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRI++ YF + ++TD+DDKII KA K E KT +
Sbjct: 42 GHARNYVSTDIIRRIMKDYFGFDLNFVMNITDVDDKIILKARRQKLLELEKSKTYTEPEL 101
Query: 200 LRLIFKILHQKVVRKLAI-----------------DLKKAKVDSGPVLTKCDEFRDELLA 242
+L + L D+ KV +G LT + D
Sbjct: 102 AKLAAEAFQSYATANLPELLKDGTQLTPSNYAERRDIAYGKVLAGGTLTGEGKPGDAEAK 161
Query: 243 LGVQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPL-TLRTVVFEFLFNFR 301
+ + I + A + K+F I LP L + S+ T+ T V ++
Sbjct: 162 MKMHISNLSS-AAQAIQQEKIFGGADEILLPYLDSLYKDSIDAKDHTIFTNVTQY----- 215
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E ++ E M+ V+ P TRV+ ++P I F++ ++D AY SD SVYFD+ +F
Sbjct: 216 WEDQFMEDMDALNVMRPDVITRVTTYVPKIAIFVKKIIDKGFAY-ESDGSVYFDIAAFEK 274
Query: 362 ----YFKL--WGRNENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWGKGR 405
Y +L RN+ Q KR DFALWK +K GEP + S WG+GR
Sbjct: 275 AGNPYARLRPESRNDKALQEEGEGSLSKNLGGKRGAGDFALWKKSKAGEPSWPSPWGEGR 334
Query: 406 PGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF---HNQS--QWVNYWLH 460
PGWHIECS MAS G ++D+H+GGIDL FPHH+NE AQS A+ H Q +WVNY+LH
Sbjct: 335 PGWHIECSVMASDVLGSKMDIHSGGIDLAFPHHDNELAQSEAYFCEHEQGPHEWVNYFLH 394
Query: 461 TGHLR--GTDGTRRLRAARFITNLSGSTIGYT 490
GHL G+ ++ L+ F T T YT
Sbjct: 395 MGHLSIAGSKMSKSLK--NFQTIRDALTTDYT 424
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 32 IKIYNPITKTK-VPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+K++N + VPF+ K + WY CGPTVYD H+GHA V DIIRRI++ YF
Sbjct: 4 LKVHNSLKPGGPVPFVPIEKGKVSWYVCGPTVYDHSHLGHARNYVSTDIIRRIMKDYFGF 63
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKI 131
+ ++TD+DDKII KA K +K Y P + K+
Sbjct: 64 DLNFVMNITDVDDKIILKARRQKLLELEKSKTYTEPELAKL 104
>gi|330805509|ref|XP_003290724.1| hypothetical protein DICPUDRAFT_155256 [Dictyostelium purpureum]
gi|325079146|gb|EGC32761.1| hypothetical protein DICPUDRAFT_155256 [Dictyostelium purpureum]
Length = 638
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 124/196 (63%), Gaps = 18/196 (9%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF- 359
++E +FE M+ VLPP TRV+E++P I ++Q ++D AY S+ SVYFD SF
Sbjct: 125 KWESSFFEDMKALNVLPPDALTRVTEYVPQIVDYVQKIIDNGFAY-ESEGSVYFDTQSFI 183
Query: 360 --PHYFKLWGR---NENITQHAV---------KRSPFDFALWKSAKPGEPWYESAWGKGR 405
Y KL NEN+ KRSPFDFALWK +K GEP + S WG+GR
Sbjct: 184 KSHDYGKLEPNSVGNENLAAEGEGALSVGISDKRSPFDFALWKKSKEGEPVWSSPWGEGR 243
Query: 406 PGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
PGWHIECSAMAS G +D+H+GG DLKFPHH+NE AQS A+ QW+NY++H+GHL
Sbjct: 244 PGWHIECSAMASDILGDNIDIHSGGSDLKFPHHDNELAQSEAYFGNKQWINYFIHSGHLL 303
Query: 466 GTDGTRRLRAAR-FIT 480
DG + ++ + FIT
Sbjct: 304 -IDGLKMSKSLKNFIT 318
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 20 PKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNH--LKWYACGPTVYDSPHIGHAVCNVKL 77
P+W PSG +T + + N +T K PF+ NK+ + WYACGPTVYD+ H+GHA +
Sbjct: 21 PEWIKPSGKETELVVNNSLTGGKTPFVFSNKDGKTITWYACGPTVYDASHMGHARTYISF 80
Query: 78 DIIRRILEHYF 88
DI+RR++ Y
Sbjct: 81 DILRRVMRDYL 91
>gi|328766817|gb|EGF76869.1| hypothetical protein BATDEDRAFT_92152 [Batrachochytrium
dendrobatidis JAM81]
Length = 755
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 176/352 (50%), Gaps = 36/352 (10%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS--LKEDYKTVAKRYFLR 201
GHA DI+RRI+ YF + ++TDIDDKII A L YK
Sbjct: 61 GHARTFFSFDIVRRIMSEYFGYDLQYVMNITDIDDKIIVSARQKHLFAKYKEANPVLNES 120
Query: 202 LIFKI---LHQKVVRKLAIDLKKA---------KVDSGPVLTKCDEFRDELLALGVQIKD 249
+I K H V ++ +K A + ++G ++ D+ + L +
Sbjct: 121 VIVKAELGWHYFVNQRFEKYMKDAANNWAEFVSEFEAGKLVGAADDVK---FGLYYKTAI 177
Query: 250 QKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFES 309
+A + K G + + +++L L L S G T +F + +E ++F
Sbjct: 178 SSRDALAKAKSGNMCINDFYLALQDPLSLFIDSQEGAKTTDQQIFRDYAAY-WEADFFHD 236
Query: 310 MEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH-----YFK 364
M+ + P TRVSE+IP I +F+Q ++ AY D SVYFD F Y K
Sbjct: 237 MDSLNIRRPDVLTRVSEYIPEIIAFVQKIMSNGYAY-EFDGSVYFDTVCFDRSDKHSYAK 295
Query: 365 L--W----------GRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
+ W G + + KR+ DFALWKS+KPGEP + S WG+GRPGWHIEC
Sbjct: 296 IEPWSAGNVKLVQEGEGDLTADTSGKRNISDFALWKSSKPGEPSWSSPWGEGRPGWHIEC 355
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
SAMA G ++D+H+GGIDL FPHH+NE AQS +QWVNY++HTGHL
Sbjct: 356 SAMAGCVLGEKIDIHSGGIDLTFPHHDNELAQSEGHFGCTQWVNYFMHTGHL 407
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 12 SYATSCESPKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGH 70
S A P W +P+G + I N +T+ K F+ + + WY+CGPTVYD H+GH
Sbjct: 3 SSAAPIRQPDWHIPAGTTVPRLYINNSLTRKKELFVPEKGRRVTWYSCGPTVYDKSHVGH 62
Query: 71 AVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
A DI+RRI+ YF + ++TDIDDKII A
Sbjct: 63 ARTFFSFDIVRRIMSEYFGYDLQYVMNITDIDDKIIVSA 101
>gi|440633075|gb|ELR02994.1| cysteinyl-tRNA synthetase [Geomyces destructans 20631-21]
Length = 829
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 139/395 (35%), Positives = 196/395 (49%), Gaps = 61/395 (15%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII-----------NKANSL----- 187
GHA V DIIRRIL YF + ++TD+DDKII KA SL
Sbjct: 78 GHARNYVATDIIRRILRDYFGFKINFVMNITDVDDKIILRARRSKILEREKAKSLSESEI 137
Query: 188 ----KEDYKTVAKRYFLRLIF---KILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDEL 240
+E ++ AK L+ ++ + ++ D AKV +G LT + D+
Sbjct: 138 SKRGQEAFQAYAKGNLPALLSNGQELTPENYAQRR--DDVYAKVLAGGTLTGEGKPGDDE 195
Query: 241 LALGVQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPL-TLRTVVFEFLFN 299
+ + + A + G+VF I LP + + S+ ++ T V ++
Sbjct: 196 AKMKMHLSALTVSAE-ALQKGEVFGGADEILLPYLDSIYKESIDSKEHSIWTDVTQY--- 251
Query: 300 FRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF 359
+E ++ ME VL P TRV+E++P I F+Q +++ AY S+ SVYFD+ +F
Sbjct: 252 --WEKDFMGDMEALNVLEPDVITRVTEYVPQIADFVQKVIEKGFAY-ESEGSVYFDIAAF 308
Query: 360 PH----YFKLWGRNENITQHAV--------------KRSPFDFALWKSAKPGEPWYESAW 401
Y +L R ++ A+ KR DFALWK +KPGEP + S W
Sbjct: 309 EKAGNSYARL--RPDSKNDQALIADGEGSLSKSLGGKRGAGDFALWKRSKPGEPSWPSPW 366
Query: 402 GKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF---HNQSQ-WVNY 457
G+GRPGWHIECS MAS G Q+D+H GGIDL FPHH+NE AQS A+ H Q WVNY
Sbjct: 367 GEGRPGWHIECSVMASDVLGSQMDMHAGGIDLAFPHHDNELAQSEAYYCEHGQPHTWVNY 426
Query: 458 WLHTGHLR--GTDGTRRLRAARFITNLSGSTIGYT 490
+LH GHL G+ ++ L+ F T GYT
Sbjct: 427 FLHMGHLSIAGSKMSKSLK--NFQTIQDALKTGYT 459
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 32 IKIYNPITKTK-VPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+K++N + VPF+ K + WY CGPTVYD H+GHA V DIIRRIL YF
Sbjct: 40 LKVHNSLQPGPPVPFVPIEKGKISWYVCGPTVYDHSHLGHARNYVATDIIRRILRDYFGF 99
Query: 91 HSIVISSVTDIDDKIINKANSLK 113
+ ++TD+DDKII +A K
Sbjct: 100 KINFVMNITDVDDKIILRARRSK 122
>gi|195380357|ref|XP_002048937.1| GJ21318 [Drosophila virilis]
gi|194143734|gb|EDW60130.1| GJ21318 [Drosophila virilis]
Length = 566
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 117/177 (66%), Gaps = 14/177 (7%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y+ E+ E+M V PP VS IP IQ FI LL KQAY+ D+SVYFDV + +
Sbjct: 151 YDAEFKENMTWLNVKPPNLRAHVSANIPVIQRFIDQLLVNKQAYVAQDNSVYFDVSKYAN 210
Query: 362 YFKLWGRNENITQ--HAV----KRSPFDFALWKSAKPG-EPWYESAWG-KGRPGWHIECS 413
Y KL E I++ HAV KR+ DFALWK+ K EP + ++WG GRPGWHIECS
Sbjct: 211 YGKL----EKISKEAHAVAEMGKRNAADFALWKAQKEEHEPSWPASWGGAGRPGWHIECS 266
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG--HLRGTD 468
A+AS FFG +VD H GG+DL+FPHHENEEAQ CA QWVNYWLHTG HL+G +
Sbjct: 267 AIASMFFGNKVDFHAGGLDLRFPHHENEEAQCCAHFKTDQWVNYWLHTGQLHLQGEE 323
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 65/102 (63%)
Query: 22 WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
W P G DTGI+IYN + KVP +++N + WY CGPTVYD H+GHA VK+DII+
Sbjct: 50 WQRPCGEDTGIRIYNHSVRGKVPLVLRNPQMVTWYTCGPTVYDKTHVGHASTYVKVDIIQ 109
Query: 82 RILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
RIL +F + + ++TD+DDKII ++ ++ +A Y
Sbjct: 110 RILRDHFKYNLVTAMNITDVDDKIIKRSRETGRNWLELAHAY 151
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA VK+DII+RIL +F + + ++TD+DDKII ++ ++ +A Y
Sbjct: 97 GHASTYVKVDIIQRILRDHFKYNLVTAMNITDVDDKIIKRSRETGRNWLELAHAY 151
>gi|146162816|ref|XP_001010154.2| cysteinyl-tRNA synthetase family protein [Tetrahymena thermophila]
gi|146146260|gb|EAR89909.2| cysteinyl-tRNA synthetase family protein [Tetrahymena thermophila
SB210]
Length = 716
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 132/206 (64%), Gaps = 25/206 (12%)
Query: 298 FNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVD 357
F ++E++Y++ ME V P RVSE++P I S+I+ +++ AY+ ++ SVYF+VD
Sbjct: 159 FARKWEMDYWQDMETLNVDKPDVIVRVSEYVPEIISYIEKIIENGYAYV-ANGSVYFNVD 217
Query: 358 SFPH-----YFKLWGRNENITQ-------------HAVKRSPFDFALWKSAKPGEPWYES 399
F Y KL ++ N Q KRSP DFALWK++KPGEP+++S
Sbjct: 218 KFHESPTHCYSKLEPQSVNDAQKLDEGEGALGKKDEKEKRSPRDFALWKASKPGEPFWDS 277
Query: 400 AWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHN----QSQWV 455
WG+GRPGWHIECS MAS G VD+H GG DLKFPHH+NE AQS AF+N Q+QWV
Sbjct: 278 PWGQGRPGWHIECSTMASEILGYPVDIHMGGEDLKFPHHDNELAQSEAFYNKQDCQNQWV 337
Query: 456 NYWLHTGHLRGTDGTRRLRAAR-FIT 480
NY++HTGHL DG + ++ + FIT
Sbjct: 338 NYFMHTGHLH-IDGLKMSKSLKNFIT 362
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
Query: 22 WSLP----SGYDTGIKIYNPIT-KTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVK 76
W LP + Y TG+K+ N + + V F+ +++Y CGPTVYDS HIGHA +
Sbjct: 57 WQLPVKDETKYLTGLKVKNTLNPQNLVEFVPHKGKQVRFYNCGPTVYDSSHIGHARTYIS 116
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFL 125
DII+RI+ YF ++TDIDDKII K+N E++ A+++ +
Sbjct: 117 ADIIKRIMVKYFGYDVFHCMNITDIDDKIIKKSNESGEEFTAFARKWEM 165
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA + DII+RI+ YF ++TDIDDKII K+N E++ A+++ +
Sbjct: 109 GHARTYISADIIKRIMVKYFGYDVFHCMNITDIDDKIIKKSNESGEEFTAFARKWEM--- 165
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLA 242
D++ VD V+ + E+ E+++
Sbjct: 166 ----------DYWQDMETLNVDKPDVIVRVSEYVPEIIS 194
>gi|322706523|gb|EFY98103.1| cysteinyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
Length = 799
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 189/387 (48%), Gaps = 50/387 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS---LKEDYKTVAKRYFL 200
GHA V DIIRRI+ HYF + + ++TD+DDKII KA L + K L
Sbjct: 42 GHARNYVTSDIIRRIMMHYFGFNVKYVMNMTDVDDKIIIKARRQRLLDLEKKKKYSEEEL 101
Query: 201 RLI----FKILHQKVVRKLAIDLKK--------------AKVDSGPVLTKCDEFRDELLA 242
R + F+ K + LA D K V SG LT + D
Sbjct: 102 RTLGLAAFRAYASKNLPLLANDASKLDETNYATQRDTAYGTVLSGGTLTGEGKPGDNEAK 161
Query: 243 LGVQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRY 302
+ + + + A K +F + LP YL + + T +F L R
Sbjct: 162 IKMHVSNMDAAAE-ALKQNAIFPGADEVLLP-YLDSLHKETMD--TSDQSIFTDLTK-RM 216
Query: 303 ELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHY 362
E + E M+ VL P TRV+E++P I F++ ++D AY ++ SVYFD+ +F
Sbjct: 217 EAVFLEDMDNLNVLRPDVITRVTEYVPQIAKFVEQIVDKGFAY-EAEGSVYFDIAAFQKA 275
Query: 363 FKLWGR-------NENITQHAV---------KRSPFDFALWKSAKPGEPWYESAWGKGRP 406
+ R N+ + + KR DFALWK +K GEP++ S WG GRP
Sbjct: 276 GNTYARLRPDSKNNKALQEEGEGSLSTNLGGKRGAGDFALWKKSKAGEPYWPSKWGDGRP 335
Query: 407 GWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF---HNQSQ--WVNYWLHT 461
GWHIECS MAS G ++D+H+GG+DL FPHH+NE AQS A+ H + + WVNY+LH
Sbjct: 336 GWHIECSVMASDVLGSRMDVHSGGVDLAFPHHDNELAQSEAYFCQHGKGEHTWVNYFLHM 395
Query: 462 GHL--RGTDGTRRLRAARFITNLSGST 486
GHL G+ ++ L+ + I + +T
Sbjct: 396 GHLSISGSKMSKSLKNFQTIADALATT 422
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 32 IKIYNPITKTK-VPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
IK++N + VPF+ + WYACGPTVYD H+GHA V DIIRRI+ HYF
Sbjct: 4 IKVHNSLKPGPPVPFVPMEPGKVSWYACGPTVYDKSHLGHARNYVTSDIIRRIMMHYFGF 63
Query: 91 HSIVISSVTDIDDKIINKA 109
+ + ++TD+DDKII KA
Sbjct: 64 NVKYVMNMTDVDDKIIIKA 82
>gi|403412349|emb|CCL99049.1| predicted protein [Fibroporia radiculosa]
Length = 776
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 130/370 (35%), Positives = 186/370 (50%), Gaps = 56/370 (15%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS--LKEDYKTVAKRYFLR 201
GHA V D++RRI+ YF + ++TDIDDKII +A L + ++
Sbjct: 57 GHARNYVTQDVLRRIVTDYFGYDVHFVMNITDIDDKIILRARQTHLVDKFRADTAHLSRE 116
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDSG-PVLTKCDEFRD--ELLALGVQIKD----QKC-E 253
L+ VR I ++ VD G P K + ++ L +Q KD Q+C +
Sbjct: 117 LL------DTVRVAWIQYIESNVDKGLPEEDKPAQGKEWEAWPRLAIQFKDKTWKQECLK 170
Query: 254 ATWQFKDGKVFSDRVFISLPLYLILIQVSL--------------------LGPLTLRTVV 293
+F+ ++R ++L L++ L RTV
Sbjct: 171 RNEKFEMHFSAANRAHVALEAAEELLRSGRTSQEHAHALINDAKDILAISLDKQHGRTVT 230
Query: 294 FEFLF---NFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDH 350
+F + +E ++F+ M + V P TRV+E++P I SF++ ++ Y D
Sbjct: 231 DHSIFRSLSAYWEADFFKDMRRLRVRDPDTLTRVTEYVPEIVSFVEGIVKNGYGY-AVDG 289
Query: 351 SVYFDVDSFPH-----YFKL--WGR-NENITQHAV--------KRSPFDFALWKSAKPGE 394
SVYFD +F Y KL W + N + + +RS DFALWK++KPGE
Sbjct: 290 SVYFDTRAFDKADGHDYAKLEPWSKGNRELLEEGEGALSIASGRRSSADFALWKASKPGE 349
Query: 395 PWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQW 454
P + S WG GRPGWHIECS MAS FG +D+H+GGIDL FPHH+NE AQS A+HN S W
Sbjct: 350 PSWPSPWGPGRPGWHIECSVMASAIFGDNMDIHSGGIDLAFPHHDNEMAQSEAYHNCSPW 409
Query: 455 VNYWLHTGHL 464
VNY++HTGHL
Sbjct: 410 VNYFIHTGHL 419
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Query: 16 SCESPKWSLPS--GYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
+ + P WS+PS + +K+YN +T+TK F+ + H+KWY CGPTVYD+ H+GHA
Sbjct: 2 AVQQPPWSMPSRQADEPVLKVYNSLTRTKTEFVAGSGRHVKWYNCGPTVYDASHMGHARN 61
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
V D++RRI+ YF + ++TDIDDKII +A
Sbjct: 62 YVTQDVLRRIVTDYFGYDVHFVMNITDIDDKIILRA 97
>gi|448082250|ref|XP_004195092.1| Piso0_005635 [Millerozyma farinosa CBS 7064]
gi|359376514|emb|CCE87096.1| Piso0_005635 [Millerozyma farinosa CBS 7064]
Length = 777
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 136/391 (34%), Positives = 185/391 (47%), Gaps = 82/391 (20%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII--------------NKANSLKE 189
GHA V DI RRIL+ YF + I +VTDIDDKII NK + +
Sbjct: 80 GHARNYVATDICRRILQDYFGYNIKFIQNVTDIDDKIIIAARQEYLFEQEIINKYQEVSD 139
Query: 190 DYKTVAKRYFLRLIFKILHQKVVRKLAIDLKK--AKVDSGPVLTKCDEFRDELLALG--- 244
+ +K++ I K L + + + + K +D + +F L A
Sbjct: 140 ELLASSKKFLSEYITKNLPEFSGKDIETEFSKWAESLDVQSLSQNNPKFPMYLKAARNAF 199
Query: 245 --VQIKDQKC---EATWQFKDGKVFS-DR----------VFISLPLYLILIQVSLLGPLT 288
+ K K E T Q +D V S D+ VF LPLY
Sbjct: 200 SVIYSKGSKVSIEEFTRQIRDVAVVSLDKELGHTVNDPSVFRKLPLY------------- 246
Query: 289 LRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGS 348
+E Y + M K VL P+ TRVSE+IP I ++ ++ AY +
Sbjct: 247 -------------WEESYNDDMNKLNVLRPSVTTRVSEYIPEIVEYVDKIVQNGFAYATN 293
Query: 349 DHSVYFDVDSFPH-----YFKL--W----------GRNENITQHAVKRSPFDFALWKSAK 391
D SVYFD F + Y KL W G + KR+ DFALWK++K
Sbjct: 294 DGSVYFDTVKFENDPRHDYAKLQPWNKGDLSLINDGEGSLSLDNTSKRNAADFALWKASK 353
Query: 392 PGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQ 451
PGEP + S WG+GRPGWHIECS MAS G +D+H+GG+DL FPHH+NE AQS A+ +
Sbjct: 354 PGEPSWPSKWGEGRPGWHIECSVMASDIGGEVLDIHSGGVDLCFPHHDNELAQSEAYFDN 413
Query: 452 SQWVNYWLHTGHL--RGTDGTRRLRAARFIT 480
QW+NY++H GHL +G ++ L+ FIT
Sbjct: 414 KQWINYFMHNGHLHIQGQKMSKSLK--NFIT 442
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Query: 2 SILSQSSLAL-SYATSCESPKWSLPS-GYDTGI-KIYNPITKTKVPFIIQNKNHLKWYAC 58
SI + S+++L + + + P+W P YD + KIYN +T+TK F+ N + WY+C
Sbjct: 10 SIRALSNMSLQAKKAAAQQPEWITPKPTYDKPVLKIYNSLTRTKNEFVTLKPNRITWYSC 69
Query: 59 GPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII 106
GPTVYD H+GHA V DI RRIL+ YF + I +VTDIDDKII
Sbjct: 70 GPTVYDRSHMGHARNYVATDICRRILQDYFGYNIKFIQNVTDIDDKII 117
>gi|326436995|gb|EGD82565.1| cysteinyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
Length = 708
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 123/347 (35%), Positives = 177/347 (51%), Gaps = 47/347 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDY---KTVAKRY 198
GHA + DI+RR+L YF + ++TD+DDKII +A N L E Y +T+ +
Sbjct: 46 GHARAYITFDIMRRVLRDYFKYDCEYVMNITDLDDKIILRARQNHLFEQYIAQETLDRDT 105
Query: 199 FLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQF 258
L+ I + L + +D+K A + P K + + KD AT
Sbjct: 106 VLQDIKEALER-------LDVKIADPEEEPEKKK----------MYGKAKDAVQAATVAL 148
Query: 259 KDGKVFSDRVFISL----PLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFG 314
+ D V + PL IL + G +F + + ++E E+ M
Sbjct: 149 PESPAREDLVALCTAAKDPLSAILDKRK--GSTVSDHSIFSSV-SRKWEAEFHRDMNALN 205
Query: 315 VLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKLW--- 366
V P RV+E +P I +F+Q ++D Y ++ SVYFDV +F +Y KL
Sbjct: 206 VEAPDVLKRVTECVPEIAAFVQRIIDNGYGY-EANGSVYFDVAAFRGSSEHNYPKLLPEA 264
Query: 367 ---------GRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
G + KRS DFALWK++KPGEP + S WG+GRPGWHIECS MAS
Sbjct: 265 AANAKALEEGEGALSSGAGDKRSQSDFALWKASKPGEPAWPSPWGQGRPGWHIECSVMAS 324
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
+D+H+GG+DLKFPHH+NE AQS A++ +WVNY++H+GHL
Sbjct: 325 SVLNDNMDIHSGGVDLKFPHHDNECAQSEAYYGNDKWVNYFIHSGHL 371
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++++N T+ K F+ + +N + WY CGPTVYD+ H+GHA + DI+RR+L YF
Sbjct: 9 LQLFNSYTRQKEVFVPRERNRVTWYGCGPTVYDASHMGHARAYITFDIMRRVLRDYFKYD 68
Query: 92 SIVISSVTDIDDKIINKA--NSLKEDY 116
+ ++TD+DDKII +A N L E Y
Sbjct: 69 CEYVMNITDLDDKIILRARQNHLFEQY 95
>gi|194883178|ref|XP_001975680.1| GG22443 [Drosophila erecta]
gi|190658867|gb|EDV56080.1| GG22443 [Drosophila erecta]
Length = 560
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 112/168 (66%), Gaps = 5/168 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E+ + M + V P + V+ +P I FIQ L+D KQAY+ D+SVYFDV +
Sbjct: 139 YEAEFRQDMLRLNVQPADVRSHVTTTMPVIIQFIQQLIDEKQAYVTPDNSVYFDVSKSQN 198
Query: 362 YFKLWG---RNENITQHAVKRSPFDFALWKSAKP-GEPWYESAWG-KGRPGWHIECSAMA 416
Y KL E + + ++KR+ DFALWK+ K GEP + + WG +GRPGWHIECSA+A
Sbjct: 199 YGKLQNIGLSEEKLERGSIKRNSADFALWKARKSSGEPTWAAPWGGEGRPGWHIECSAIA 258
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FFG Q+D H GG+DL+FPHHENEEAQ CA + QWVNYWLHTG L
Sbjct: 259 GLFFGRQLDFHAGGLDLRFPHHENEEAQCCARYKTEQWVNYWLHTGQL 306
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 67/103 (65%)
Query: 21 KWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDII 80
KW P G TGI IYN + KVP I++N WY CGPTVYDS H+GHA VK+DI+
Sbjct: 37 KWRKPIGQHTGINIYNHGLRQKVPLILRNPQMATWYTCGPTVYDSAHLGHASTYVKVDIL 96
Query: 81 RRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+RIL YF I+ + ++TD+DDKII +A D++ +A+ Y
Sbjct: 97 QRILRDYFKINLVTAMNITDVDDKIIKRAQLAGLDWQKMARAY 139
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA VK+DI++RIL YF I+ + ++TD+DDKII +A D++ +A+ Y
Sbjct: 85 GHASTYVKVDILQRILRDYFKINLVTAMNITDVDDKIIKRAQLAGLDWQKMARAY 139
>gi|390365344|ref|XP_796899.3| PREDICTED: probable cysteine--tRNA ligase, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 559
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 128/208 (61%), Gaps = 13/208 (6%)
Query: 294 FEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVY 353
F L F YE E+++ M+ VLP T TRVS+ IP I +FI +++ Y S SVY
Sbjct: 109 FRELAGF-YEREFYQDMQHLNVLPATVYTRVSDHIPEILTFIDSIIKNGYGYSTSSGSVY 167
Query: 354 FDVDSF--PHYFKLWGRNENITQH--------AVKRSPFDFALWKSAKPGEPWYESAWGK 403
F+VD+F Y KL ++ ++ QH KR P DFALWK KPGEPW+++ WGK
Sbjct: 168 FNVDAFTLERYDKLASQDLDV-QHDEGKEFIDPEKRHPRDFALWKGVKPGEPWWDAPWGK 226
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGH 463
GRPGWHIECSAM+ FG ++D+HTGG DL FPHH NE AQ A N +QW NY+LH+GH
Sbjct: 227 GRPGWHIECSAMSKAIFGERLDIHTGGRDLAFPHHNNEIAQCEACFNSNQWANYFLHSGH 286
Query: 464 L-RGTDGTRRLRAARFITNLSGSTIGYT 490
L R D + ++ + + ++ YT
Sbjct: 287 LYRKYDADKMSKSLQNVVSIQDFLKTYT 314
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Query: 30 TGIKIYNPITKT-------KVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRR 82
T + + N +T K P ++ NKN W+ACGPTVYDS HIGHA V+ DIIRR
Sbjct: 15 TTVHVLNSLTAAHDRKSAKKEPLLLMNKNVATWFACGPTVYDSAHIGHASSYVRFDIIRR 74
Query: 83 ILEHYFHIHSIVISSVTDIDDKIINKANSLK-EDYKTVAKRYFLPLIFKILHQKVV 137
IL +F +++ +TDIDDKII +++ +D++ +A Y + H V+
Sbjct: 75 ILAEFFQTSVVMVMGITDIDDKIIRRSHEQNLKDFRELAGFYEREFYQDMQHLNVL 130
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK-EDYKTVAKRYFLRL 202
GHA V+ DIIRRIL +F +++ +TDIDDKII +++ +D++ +A Y
Sbjct: 61 GHASSYVRFDIIRRILAEFFQTSVVMVMGITDIDDKIIRRSHEQNLKDFRELAGFYEREF 120
Query: 203 IFKILHQKVV 212
+ H V+
Sbjct: 121 YQDMQHLNVL 130
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 220 KKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQF 258
+K + P+L CD RD L G+QIKD+ ATW+F
Sbjct: 506 RKLMKERAPLLNACDHVRDTLTQNGIQIKDRGATATWEF 544
>gi|255084145|ref|XP_002508647.1| hypothetical protein MICPUN_113739 [Micromonas sp. RCC299]
gi|226523924|gb|ACO69905.1| hypothetical protein MICPUN_113739 [Micromonas sp. RCC299]
Length = 744
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/366 (34%), Positives = 170/366 (46%), Gaps = 65/366 (17%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V D+IRR++ YF I +VTDIDDKI+ +A+ + + A L
Sbjct: 79 GHARNYVNFDVIRRVMTDYFRYDVRFIMNVTDIDDKIVMRAHLRRSEAMIAAAEAVGGL- 137
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKD--QKCEATWQFKDG 261
++ L KA + SG E L + KD + + W +DG
Sbjct: 138 -----DALIAPL-----KALLASGEKNLGEQEALTASLCAAIVAKDPTKVADPDWTVQDG 187
Query: 262 KVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRA 321
YL L +E E+ E M GV P
Sbjct: 188 -------------YLALAHA--------------------FEAEFMEDMRLMGVARPDAL 214
Query: 322 TRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH-----YFKLW---------- 366
TRVSE+ I +IQT++D AY S+ SVYFDV +F Y KL
Sbjct: 215 TRVSEYTEKIVQYIQTIIDRGYAY-ESNGSVYFDVPTFEQSPNHKYAKLNKEALKNVELA 273
Query: 367 --GRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQV 424
G + KR+ DF LWK++KPGEP + S WG GRPGWHIECSAM S G V
Sbjct: 274 MDGEGALAADASEKRAENDFVLWKASKPGEPRWPSPWGLGRPGWHIECSAMCSDILGEAV 333
Query: 425 DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAARFITNLSG 484
D++ GGIDL FPHHEN+ AQS A ++ QWVNY++HTGHL DG + ++ + +
Sbjct: 334 DINGGGIDLNFPHHENQLAQSEAHYDIKQWVNYFVHTGHLH-IDGLKMSKSLKNFITIRA 392
Query: 485 STIGYT 490
+ YT
Sbjct: 393 ALKMYT 398
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
Query: 20 PKWSLPSGYDT--------GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHA 71
P WS P + ++ N TKTKVPF+ + N + WY CGPTVYDS H+GHA
Sbjct: 22 PWWSPPDAEEASKDGPRRDAPRLLNSFTKTKVPFVPLDGNRVGWYICGPTVYDSAHMGHA 81
Query: 72 VCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
V D+IRR++ YF I +VTDIDDKI+ +A
Sbjct: 82 RNYVNFDVIRRVMTDYFRYDVRFIMNVTDIDDKIVMRA 119
>gi|147899657|ref|NP_001080786.1| cysteine--tRNA ligase, cytoplasmic [Xenopus laevis]
gi|82241490|sp|Q7ZWR2.1|SYCC_XENLA RecName: Full=Cysteine--tRNA ligase, cytoplasmic; AltName:
Full=Cysteinyl-tRNA synthetase; Short=CysRS
gi|28436794|gb|AAH46746.1| Cars-prov protein [Xenopus laevis]
Length = 747
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 170/354 (48%), Gaps = 52/354 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA + DI+RR+L YF ++TDIDDKII KR R +
Sbjct: 65 GHARSYISFDILRRVLRDYFKYDVFYCMNITDIDDKII--------------KRARQRHL 110
Query: 204 FKILHQKVV--RKLAIDLKKAKVDSGPVLTKCDEFRD-ELLALGVQIKDQKCEATWQFKD 260
F+ + L D+ A + P L + E D + + +I+ A +D
Sbjct: 111 FQQYRESNPPHSDLLQDVNTALI---PFLQRISETNDPDKKQMLERIQTAVSAALLPLQD 167
Query: 261 G--KVFSDRVFISLPLYLILIQVSLL--------GPLTLRTVVFEFLFNFRYELEYFESM 310
K L+ V LL G +F L + +E EY + M
Sbjct: 168 ALNKNTGAEELQKHSQVLMEAAVDLLSDWLDEKHGAQIADNSIFSQLPKY-WEGEYHKDM 226
Query: 311 EKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV----DSFPHYFKLW 366
E VL P TRVSE++P I +F+Q ++D Y+ S+ SVYF DS H++
Sbjct: 227 EALNVLTPDVLTRVSEYVPEIVAFVQKIVDNGYGYV-SNGSVYFSTAKFHDSENHFYAKL 285
Query: 367 GRNENITQHAV----------------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHI 410
Q A+ K+SP DFALWK++KPGEP +ES WGKGRPGWHI
Sbjct: 286 VPEAVGDQKALQEGEGDLSISADRLSEKQSPNDFALWKASKPGEPSWESPWGKGRPGWHI 345
Query: 411 ECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
ECSAMA G +D+H GG DL+FPHH+NE AQS A+ + WV Y+LHTGHL
Sbjct: 346 ECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAYFDNDHWVRYFLHTGHL 399
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 20 PKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
P WS P+ + G+++YN +T++K F Q + WY CGPTVYD+ H+GHA + D
Sbjct: 15 PPWSAPNTNEQPGLRLYNSLTRSKELFFPQVGRKVTWYCCGPTVYDASHMGHARSYISFD 74
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
I+RR+L YF ++TDIDDKII +A
Sbjct: 75 ILRRVLRDYFKYDVFYCMNITDIDDKIIKRA 105
>gi|384250501|gb|EIE23980.1| hypothetical protein COCSUDRAFT_1550, partial [Coccomyxa
subellipsoidea C-169]
Length = 569
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 168/345 (48%), Gaps = 48/345 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V +DI+RR++E YF ++ +VTD+DDKII +A L+
Sbjct: 44 GHARYYVTMDILRRVIEDYFGYDVDLVMNVTDVDDKIIRRAR-------------LNHLL 90
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGKV 263
K L Q D K D+ L+K E + V+ + QK Q +
Sbjct: 91 EKYLAQ------TPDTAKVLQDAEAALSKL-EAKQRAAVSRVEAEQQKEGLNVQARCANK 143
Query: 264 FSDRVFISLPLYLILIQVSL-LGPLT------LRTVVFEFLFNFRYELEYFESMEKFGVL 316
++ L I+ SL P T ++ + RYE ++ E +
Sbjct: 144 LRTLSHVTCELACPDIRTSLSQAPRTGTWSPAVQAIGTRLNHAARYEADFLEDLHLLNCR 203
Query: 317 PPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENITQHA 376
PP TRVSE++ I++++Q + D AY + SVYFD + Y E +
Sbjct: 204 PPDVLTRVSEYMDEIRAYVQQIHDNGMAY-SVNGSVYFDTQA---YRSAAADGEANFASS 259
Query: 377 VKRSPFDFALWKSAKPGEPWYESA---------WGKGRPGWHIECSAMASHFFGGQVDLH 427
KR+ DFALWK AK GEP +ES GKGRPGWHIECSAMAS FG +DLH
Sbjct: 260 DKRNKSDFALWKQAKAGEPAWESPDCARDEQGNLGKGRPGWHIECSAMASSIFGPSIDLH 319
Query: 428 TGGIDLKFPHHENEEAQSCAFHNQS--------QWVNYWLHTGHL 464
TGG DL FPHHENE AQ+ AF+++ QWVNY+LH GHL
Sbjct: 320 TGGADLAFPHHENELAQAEAFYHEEYAKCNCEPQWVNYFLHAGHL 364
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 4/89 (4%)
Query: 32 IKIYNPITKTKVPFIIQNK--NHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
+++YN +TK K F+ + + WY CGPTVYD+ H+GHA V +DI+RR++E YF
Sbjct: 5 LRLYNSLTKQKEVFMTVDPAGKRVTWYTCGPTVYDAAHLGHARYYVTMDILRRVIEDYFG 64
Query: 90 IHSIVISSVTDIDDKIINKA--NSLKEDY 116
++ +VTD+DDKII +A N L E Y
Sbjct: 65 YDVDLVMNVTDVDDKIIRRARLNHLLEKY 93
>gi|449298109|gb|EMC94126.1| hypothetical protein BAUCODRAFT_74977 [Baudoinia compniacensis UAMH
10762]
Length = 803
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/377 (34%), Positives = 189/377 (50%), Gaps = 49/377 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA-------------NSLKED 190
GHA V DIIRRIL YF + ++TD+DDKII A + ++
Sbjct: 62 GHARNYVSTDIIRRILSDYFRFQVFFVMNITDVDDKIILAARQQHLLSEWLAQHTEVDQE 121
Query: 191 YKTVAKRYFLRLIFK---ILHQKVV---RKLAIDLKKAKVDSGPVLTKCDEFRDELLALG 244
+ + + FL + K +L VV ++L V G LT + A
Sbjct: 122 VREITNQAFLMYVAKHLPLLSNVVVLANYDEQVELAYGHVLKGQSLTNDGSPPGDKEA-K 180
Query: 245 VQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTV---VFEFLFNFR 301
+++ + E+ Q + F++ ++L + L T++ +F L R
Sbjct: 181 IRMHMRTAESAVQALLALDHTYDAFVAKASGVLLPYIDSLYKRTVKGTDHHIFTKLTK-R 239
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE +FE M V P + TRV+E+ P I F++ + D AY + SVY+D+ +
Sbjct: 240 YEQRFFEDMAALNVRSPDKLTRVTEYGPQIVDFVKQVQDHAFAY-ETHGSVYYDIKQWES 298
Query: 362 ----YFKL--WGRNENITQ-----------HAVKRSPFDFALWKSAKPGEPWYESAWGKG 404
Y +L W RN+ Q K+S DFALWK++K GEP + S WG G
Sbjct: 299 TGGVYARLEPWNRNDGELQADGEGALSTKPSGSKKSAADFALWKASKEGEPSWPSPWGDG 358
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS-----QWVNYWL 459
RPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS AF ++S QWVNY+L
Sbjct: 359 RPGWHIECSAMASDVLGKQIDVHSGGIDLAFPHHDNELAQSEAFWHESGKDSRQWVNYFL 418
Query: 460 HTGHL--RGTDGTRRLR 474
H GHL +G+ ++ L+
Sbjct: 419 HMGHLSIQGSKMSKSLK 435
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Query: 20 PKWSLP-----SGYDTGIKIYNPITKTKVPFI--IQNKNHLKWYACGPTVYDSPHIGHAV 72
P+W P S + +YN +T++KVPFI Q+ + WYACGPTVYD H+GHA
Sbjct: 6 PEWQPPPAPAESAELPRLLVYNSLTRSKVPFIPIDQDGKKVGWYACGPTVYDDAHLGHAR 65
Query: 73 CNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII 106
V DIIRRIL YF + ++TD+DDKII
Sbjct: 66 NYVSTDIIRRILSDYFRFQVFFVMNITDVDDKII 99
>gi|67623595|ref|XP_668080.1| cysteinyl-tRNA-synthetase [Cryptosporidium hominis TU502]
gi|54659275|gb|EAL37860.1| cysteinyl-tRNA-synthetase [Cryptosporidium hominis]
Length = 425
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 120/181 (66%), Gaps = 18/181 (9%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+ELE+F+ M+ V P TRVSEFIP I FI T++ AY S+ SVYFDV+SF
Sbjct: 131 EFELEFFDDMKALNVKMPDVITRVSEFIPEIIDFISTIISRGFAY-ESEGSVYFDVESFR 189
Query: 361 HYFK-LWGRNENITQHAV----------------KRSPFDFALWKSAKPGEPWYESAWGK 403
K ++GR E + V K+SP DFALWK AKP EP ++S WGK
Sbjct: 190 ADEKHVYGRMEPKSVADVNRLLEGEGELGEHLKDKKSPLDFALWKKAKPEEPCWDSPWGK 249
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGH 463
GRPGWHIECS MAS+ G +D+H+GGIDL+FPHH+NE AQS A ++Q+QWVNY+LH+GH
Sbjct: 250 GRPGWHIECSVMASNTLGFPIDIHSGGIDLRFPHHDNELAQSEAHYDQAQWVNYFLHSGH 309
Query: 464 L 464
L
Sbjct: 310 L 310
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 11 LSYATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGH 70
S A S +S S Y TG+ + N +T K FI N + WYACGPTVYDS H+GH
Sbjct: 19 FSNAESGDSSSASKRCSYSTGLMLNNSMTGGKTEFIPVNGRRVNWYACGPTVYDSAHLGH 78
Query: 71 AVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK-EDYKTVAKRYFLPLI- 128
A V DIIRR+LE YF ++ ++TDIDDKII ++N K E++ +A+ + L
Sbjct: 79 ARNYVTFDIIRRVLEDYFGYDVYLVMNITDIDDKIIKRSNEQKRENFLDLAREFELEFFD 138
Query: 129 -FKILHQKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHS 167
K L+ K+ I TR +D I I+ F S
Sbjct: 139 DMKALNVKMPDVI-TRVSEFIPEIIDFISTIISRGFAYES 177
>gi|171682892|ref|XP_001906389.1| hypothetical protein [Podospora anserina S mat+]
gi|170941405|emb|CAP67056.1| unnamed protein product [Podospora anserina S mat+]
Length = 843
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 134/392 (34%), Positives = 184/392 (46%), Gaps = 58/392 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA + DIIRRI + YF + + TD+DDKII KA + E K+
Sbjct: 77 GHARNYLSNDIIRRIFQDYFGYEVNFVMNYTDVDDKIIIKARRQRLLDLEKEKSYTPEQL 136
Query: 200 LRLIFKILHQKVVRKLAIDLKKAK--VDSGPVLTKCDEFRDELLALG------------V 245
L+ K L + + + + +D + D ++LA G
Sbjct: 137 RELVSKAFQAYAQSNLPLLVTQGQPELDENNYQARKDAAYGQVLAGGTLSGEGRPGDAEA 196
Query: 246 QIK---DQKCEATWQFKDGKVFSDRVFISLP----LYLILIQVSLLGPLTLRTVVFEFLF 298
+IK + A + F I LP LY I S T T E F
Sbjct: 197 KIKMHLNNMDSAAKSLQTSSGFDGAEDILLPYLDSLYKETIDTSDQTIFTDLTQRMEKAF 256
Query: 299 NFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS 358
N + M VL PT TRV+E++P I SF++ ++ AY +D SVYFD+ +
Sbjct: 257 N--------DDMAALNVLEPTAVTRVTEYVPQIVSFVEQIIQKGFAY-EADGSVYFDIGA 307
Query: 359 FPH----YFKL--WGRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAW 401
F Y +L RN+ Q K+ DFALWK +KPGEP++ S W
Sbjct: 308 FEKAGNTYARLRPESRNDKALQEEGEGSLSKSSGGQKKRDADFALWKRSKPGEPYWPSPW 367
Query: 402 GKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS-----QWVN 456
G+GRPGWHIECS MAS G +D+H+GGIDL FPHH+NE AQS AF +Q WVN
Sbjct: 368 GQGRPGWHIECSVMASDKLGDNMDIHSGGIDLAFPHHDNELAQSEAFFHQCGKGEHTWVN 427
Query: 457 YWLHTGHLR--GTDGTRRLRAARFITNLSGST 486
Y+LH GHL G+ ++ L+ + I + +T
Sbjct: 428 YFLHMGHLSIAGSKMSKSLKNFQTIQDALATT 459
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 43 VPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDID 102
VPF+ + + WYACGPT YD H+GHA + DIIRRI + YF + + TD+D
Sbjct: 51 VPFVPKTDGKISWYACGPTTYDLSHLGHARNYLSNDIIRRIFQDYFGYEVNFVMNYTDVD 110
Query: 103 DKIINKANSLK----EDYKTVAKRYFLPLIFKILHQKVVGSIP 141
DKII KA + E K+ L+ K ++P
Sbjct: 111 DKIIIKARRQRLLDLEKEKSYTPEQLRELVSKAFQAYAQSNLP 153
>gi|453084263|gb|EMF12308.1| cysteinyl-tRNA synthetase [Mycosphaerella populorum SO2202]
Length = 797
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 129/367 (35%), Positives = 180/367 (49%), Gaps = 49/367 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII-------------NKANSLKED 190
GHA V DIIRRIL YF + ++TD+DDKII K ++ E+
Sbjct: 60 GHARNYVSNDIIRRILSDYFKFDVNFVMNITDVDDKIILEGRKRYLLDQFLAKHEAVDEE 119
Query: 191 YKTVAKRYFLRLIFK---ILHQKVVRKLAIDLKKA--KVDSGPVLTKCDEFRDELLALGV 245
++ + + + K +L + A D KKA V SG + D+ + +
Sbjct: 120 VRSTTREAYEAYVAKQLPLLGESKPETFAQDEKKAYGHVLSGKAVEGNGPPGDKEAKVKM 179
Query: 246 QIKDQKCEA------TWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFN 299
+ + A + Q V++ + L YL + V F L
Sbjct: 180 HLDTVRSAAEVLALPSDQIPALDVWAAKASGVLKPYLDSKYSHTIDGRKQHDV-FTKLTK 238
Query: 300 FRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF 359
YE +FE ME+ V P + RV+E+ I F++ + D AY + SVY+D ++
Sbjct: 239 L-YEQRFFEDMERLNVRSPDKLVRVTEYGQKIVDFVKQIQDNGYAY-EHEGSVYYDTTAW 296
Query: 360 PH----YFKL--WGRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWG 402
Y +L W RN+ Q K++ DFALWK +KPGEP +ES WG
Sbjct: 297 EKSGGVYARLQPWNRNDQELQADGEGSLATNTTNFKKASSDFALWKGSKPGEPVWESPWG 356
Query: 403 KGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQ-----SQWVNY 457
+GRPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS AFH++ QWVNY
Sbjct: 357 EGRPGWHIECSAMASDILGKQMDIHSGGIDLAFPHHDNELAQSEAFHHKCGAESEQWVNY 416
Query: 458 WLHTGHL 464
+LH GHL
Sbjct: 417 FLHMGHL 423
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 55/88 (62%)
Query: 19 SPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
+P+ S+ G + IYN +T+ K PF+ + + WYACGPTVYD H+GHA V D
Sbjct: 10 APQKSVEQGGLPQLVIYNSLTRKKDPFVPISGTKVGWYACGPTVYDDAHLGHARNYVSND 69
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKII 106
IIRRIL YF + ++TD+DDKII
Sbjct: 70 IIRRILSDYFKFDVNFVMNITDVDDKII 97
>gi|195057996|ref|XP_001995365.1| GH23122 [Drosophila grimshawi]
gi|193899571|gb|EDV98437.1| GH23122 [Drosophila grimshawi]
Length = 533
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 92/186 (49%), Positives = 115/186 (61%), Gaps = 10/186 (5%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+ E+ M + V PP VS I IQ FI+ LL T+QAY+ D+SVYFDV S
Sbjct: 117 FAAEFKLDMHRLNVKPPNLRAHVSANIATIQLFIEQLLATQQAYVSQDNSVYFDVASCAS 176
Query: 362 YFKL---WGRNENITQHAVKRSPFDFALWKSAKPGE------PWYESAWGK-GRPGWHIE 411
Y KL E+ Q + KR+ DFALWK+ K GE P +E++WG GRPGWHIE
Sbjct: 177 YGKLEKLLQLQESNPQSSGKRTAADFALWKAKKEGEAAQQDEPSWEASWGGVGRPGWHIE 236
Query: 412 CSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
CSA+A FFG Q+D+H GG+DL+FPHHENEEAQ CA + QWVNYWLHTG L
Sbjct: 237 CSAIAGKFFGRQLDIHAGGLDLRFPHHENEEAQCCAHYETDQWVNYWLHTGQLHLVGDEH 296
Query: 472 RLRAAR 477
++ +R
Sbjct: 297 KMSKSR 302
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 81/137 (59%), Gaps = 3/137 (2%)
Query: 15 TSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCN 74
T + +W P G DTGI+IYN + KVP +++N + + WY CGPTVYD H+GHA
Sbjct: 9 TQIDGYRWQKPCGEDTGIQIYNHTVRGKVPLVLRNPHVVTWYTCGPTVYDKTHVGHASTY 68
Query: 75 VKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKI-LH 133
VK+DII+RIL YF + + ++TD+DDKII ++ ++ +A+ + FK+ +H
Sbjct: 69 VKVDIIQRILRDYFKYNLVTAMNITDVDDKIIKRSRETGRNWLELAQAFAAE--FKLDMH 126
Query: 134 QKVVGSIPTRGHAVCNV 150
+ V R H N+
Sbjct: 127 RLNVKPPNLRAHVSANI 143
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA VK+DII+RIL YF + + ++TD+DDKII ++ ++ +A+ +
Sbjct: 63 GHASTYVKVDIIQRILRDYFKYNLVTAMNITDVDDKIIKRSRETGRNWLELAQAF 117
>gi|320585786|gb|EFW98465.1| cysteinyl-tRNA synthetase [Grosmannia clavigera kw1407]
Length = 916
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 138/398 (34%), Positives = 181/398 (45%), Gaps = 63/398 (15%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK------EDYKTVAKR 197
GHA V D+IRRIL YF I ++TD+DDKII KA + E T +R
Sbjct: 50 GHARNYVSTDVIRRILRDYFGYKVQFIMNITDVDDKIIIKARRKRLLDLEREKTYTAEQR 109
Query: 198 YFLR-------------LIFKILHQKVVRKLAI-----DLKKAKVDSGPVLTKCDEFRDE 239
+ L L+ V AI D V +G LT D
Sbjct: 110 HALGSAAFQAYAAANLPLLLTGYAGPVGLSEAIYAERRDAVYGAVLAGGTLTGEGRAGDA 169
Query: 240 LLALGVQIKDQKCEATWQFKDGKVFSDRVFISLP----LYLILIQVSLLGPLTLRTVVFE 295
+ + + A + G VF + LP LY I S T T E
Sbjct: 170 EAKTKMHVANMDSAAR-GLQSGTVFEAAEEVLLPYLDSLYKETIDTSDQTMFTDLTQAME 228
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFD 355
F + M+ VL P TRV+E++P I +F + ++D AY ++ SVYFD
Sbjct: 229 KAFT--------DDMDALNVLRPDAVTRVTEYVPQIVAFTKGIIDKGFAY-EANGSVYFD 279
Query: 356 VDSFPHYFKLWGR------NENITQH----------AVKRSPFDFALWKSAKPGEPWYES 399
+++F + R N+ Q A KR DFALWK +KPGEP++ S
Sbjct: 280 IEAFERAGNTYARLRPESKNDKALQEEGEGSLSKSLAGKRRAGDFALWKRSKPGEPFWAS 339
Query: 400 AWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF-----HNQSQW 454
WG GRPGWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS AF + W
Sbjct: 340 PWGAGRPGWHIECSVMASDKLGEQMDIHSGGIDLAFPHHDNELAQSEAFFHRPGAGEHSW 399
Query: 455 VNYWLHTGHLR--GTDGTRRLRAARFITNLSGSTIGYT 490
V Y+LH GHL G+ ++ L+ F T GYT
Sbjct: 400 VRYFLHMGHLSIAGSKMSKSLK--NFQTIQDALETGYT 435
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 30 TGIKIYNPIT-KTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
GI ++N + T V F + ++ + WY+CGPTVYD H+GHA V D+IRRIL YF
Sbjct: 10 AGIAVHNSLKPGTPVHFEPKQEDTVTWYSCGPTVYDLSHMGHARNYVSTDVIRRILRDYF 69
Query: 89 HIHSIVISSVTDIDDKIINKA 109
I ++TD+DDKII KA
Sbjct: 70 GYKVQFIMNITDVDDKIIIKA 90
>gi|212535374|ref|XP_002147843.1| cysteinyl-tRNA synthetase [Talaromyces marneffei ATCC 18224]
gi|210070242|gb|EEA24332.1| cysteinyl-tRNA synthetase [Talaromyces marneffei ATCC 18224]
Length = 798
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 122/195 (62%), Gaps = 21/195 (10%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+YE + + VL P TRV+E+ P I F++ +++ K AY+ SD SVYFD+ +F
Sbjct: 243 KYEERFMRDLRDLNVLDPDELTRVTEYGPQIAQFVERIVENKFAYVTSDGSVYFDIKAFE 302
Query: 361 H----YFKL--WGRNEN----------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKG 404
Y +L W R++ ++ K SP DFALWK++KPGEP + S WGKG
Sbjct: 303 DAGFPYARLEPWSRSDGKLVAEGEGALTSKTTEKHSPSDFALWKASKPGEPSWSSQWGKG 362
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF---HNQSQWVNYWLHT 461
RPGWHIECSAMAS G +D+H+GGIDL FPHH+NE AQS A+ H QW+NY+LH
Sbjct: 363 RPGWHIECSAMASDRLGKSIDIHSGGIDLAFPHHDNELAQSEAYWNTHTHDQWINYFLHM 422
Query: 462 GHL--RGTDGTRRLR 474
GHL +G+ ++ L+
Sbjct: 423 GHLSIQGSKMSKSLK 437
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
Query: 14 ATSCESPKWSLPS----GYDTGIKIYNPITKTKVPFIIQNKNHLK--WYACGPTVYDSPH 67
AT+ + P W P+ +KIYN +TKTKVPF+ + N K WYACGPTVYD H
Sbjct: 2 ATARQQPAWQQPAVSPDAKLPSLKIYNSLTKTKVPFVPVDPNGRKVTWYACGPTVYDDSH 61
Query: 68 IGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII 106
+GHA V DIIRRIL YF + ++TD+DDKII
Sbjct: 62 LGHARNYVTTDIIRRILRDYFKFDVHFVMNITDVDDKII 100
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII 181
GHA V DIIRRIL YF + ++TD+DDKII
Sbjct: 63 GHARNYVTTDIIRRILRDYFKFDVHFVMNITDVDDKII 100
>gi|71014778|ref|XP_758760.1| hypothetical protein UM02613.1 [Ustilago maydis 521]
gi|46098550|gb|EAK83783.1| hypothetical protein UM02613.1 [Ustilago maydis 521]
Length = 824
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 130/391 (33%), Positives = 179/391 (45%), Gaps = 72/391 (18%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKAN------------------ 185
GHA V DIIRRIL Y + ++TD+DDKII KA
Sbjct: 77 GHARNYVTQDIIRRILRDYLGYDVHFVMNITDVDDKIIIKARHSYLLKQFRSQHAQLTKP 136
Query: 186 ---SLKEDYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSG-----------PVLT 231
+++E + + R + Q+ A + KA+ P
Sbjct: 137 LLATVQEAWSAYFVKNLERFAPPVPPQEQQGGFAQEANKARAGEAGFEEIARLRQDPAWL 196
Query: 232 KCDEFRDELLALGVQIKDQKCEATWQFK--------DGKVFSDRVFISLPLYLILIQVSL 283
K ++ + D+ +A G+ SD + S + + + +
Sbjct: 197 KAASEKEPKFGMWFAALDKSRQAQVAAAMSLAAADTSGQAASDLIDASQDVLAVFLD-NQ 255
Query: 284 LGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQ 343
G +F + +E EYF M++ V PPT TRVSE++P I +F+Q ++D
Sbjct: 256 FGSTVTDPAIFRDTAAY-WEAEYFNDMKRLHVEPPTTLTRVSEYVPEIVTFVQQIIDRGF 314
Query: 344 AYI-GSDHS---VYFDV----------DSFPH-YFKL--WGR-NENITQH---------- 375
AY G D + V+FD SF H Y KL W + N + +
Sbjct: 315 AYAEGVDQNKKNVWFDTRAFDGAKSQDGSFQHSYAKLQPWSKGNRELLEEGEGSLSTSTA 374
Query: 376 --AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDL 433
A KR+ DFALWKS+KPGEP + S WG GRPGWHIECS M S G +D+H+GG+DL
Sbjct: 375 ATAGKRAASDFALWKSSKPGEPAWPSPWGPGRPGWHIECSVMGSAVLGETMDIHSGGVDL 434
Query: 434 KFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FPHH+NE AQS A H QWVNY+LHTGHL
Sbjct: 435 MFPHHDNEIAQSEAHHGCRQWVNYFLHTGHL 465
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 20 PKWSLPSGY--DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
P+W +P + +K+YN +T+TK PF+ + + WY CGPTVYD+ H+GHA V
Sbjct: 26 PEWQIPIKQVPEPELKMYNSLTRTKTPFVPKKGRTVTWYNCGPTVYDASHMGHARNYVTQ 85
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
DIIRRIL Y + ++TD+DDKII KA
Sbjct: 86 DIIRRILRDYLGYDVHFVMNITDVDDKIIIKA 117
>gi|167526279|ref|XP_001747473.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773919|gb|EDQ87553.1| predicted protein [Monosiga brevicollis MX1]
Length = 531
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 178/345 (51%), Gaps = 48/345 (13%)
Query: 159 LEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQKVVRKLAID 218
+ YF + ++TDIDDKII +A ++ Y + +Y + + V LA+
Sbjct: 1 MTDYFGYDVKFVMNITDIDDKIIVRA---RQQY--LYDQYVASHANESVEADVRAALAVY 55
Query: 219 LKKAKVDSGPVL----TKCDEFRDELLALGVQIKDQKCEATWQFKDGKVFSDRVFISLPL 274
+ K + P L K + + LLA G ++ A +D PL
Sbjct: 56 VAKQEKSEEPALKAMMQKTIDAVEALLAAGSATENADLLAA--ARD------------PL 101
Query: 275 YLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSF 334
L L + G +F L +E EYF M V PPT TRV+E++ I +F
Sbjct: 102 SLFLDKQH--GSTVEDHAIFARLTQ-HWEAEYFADMAALNVRPPTVLTRVTEYVEEIVTF 158
Query: 335 IQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKLWGR-NENITQHA-----------V 377
I+ ++ AY S+ SVYFD + Y KL ++++ A
Sbjct: 159 IEQIISNGYAY-ASNGSVYFDSPRYAASDAHDYPKLVPEASQDVASLADAEGSLSSSDNE 217
Query: 378 KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPH 437
KRSP+DFALWK++KPGEP ++S WGKGRPGWHIECSAM FG ++D+H+GGIDL FPH
Sbjct: 218 KRSPYDFALWKASKPGEPAWDSPWGKGRPGWHIECSAMCHAAFGDKIDIHSGGIDLCFPH 277
Query: 438 HENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRRLRAARFIT 480
H+NE AQS AF++Q QW NY+ H+GHL G ++ L+ FIT
Sbjct: 278 HDNEIAQSEAFYDQGQWCNYFCHSGHLTIEGLKMSKSLK--NFIT 320
>gi|70953127|ref|XP_745684.1| cysteine--tRNA ligase [Plasmodium chabaudi chabaudi]
gi|56526086|emb|CAH76958.1| cysteine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
Length = 582
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 131/201 (65%), Gaps = 19/201 (9%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF- 359
++E E++E M+ VL PT TRVSE++ I FI+ +++ K AY+ S+ SVYFD+D+F
Sbjct: 113 KWEYEFWEDMKNLNVLLPTSITRVSEYVNEIIKFIEKIIENKYAYVSSEGSVYFDIDAFK 172
Query: 360 --PHYFK--------------LWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGK 403
P++F L G + K++ +DFALWKS+KP EP ++S WGK
Sbjct: 173 KNPNHFYARMEPMSVKDETKILEGEGDLGVISKNKKNSYDFALWKSSKPNEPSWDSPWGK 232
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGH 463
GRPGWHIECS MAS+ G +D+H+GG+DL+FPHH+NE AQS AF + SQWVNY+LH+GH
Sbjct: 233 GRPGWHIECSTMASNILGKVLDIHSGGVDLRFPHHDNELAQSEAFFDHSQWVNYFLHSGH 292
Query: 464 L--RGTDGTRRLRAARFITNL 482
L G ++ L+ I N+
Sbjct: 293 LHIEGLKMSKSLKNFITIKNM 313
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 72/107 (67%), Gaps = 3/107 (2%)
Query: 20 PKWSLPSGYD---TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVK 76
PKW++PS + T + + N +T +KV F+ Q N +KWYACGPTVYD+ H+GHA V
Sbjct: 8 PKWTMPSKENKTITNLMVNNSLTHSKVEFVPQEGNTIKWYACGPTVYDAAHLGHARTYVS 67
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
DIIRRIL +YF ++ ++TDIDDKII ++ K ++ +A+++
Sbjct: 68 FDIIRRILTNYFKYDVFMVINITDIDDKIIKRSEEEKVNFTELARKW 114
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V DIIRRIL +YF ++ ++TDIDDKII ++ K ++ +A+++
Sbjct: 60 GHARTYVSFDIIRRILTNYFKYDVFMVINITDIDDKIIKRSEEEKVNFTELARKW 114
>gi|66807293|ref|XP_637369.1| cysteinyl-tRNA synthetase [Dictyostelium discoideum AX4]
gi|74996749|sp|Q54KR1.1|SYCC_DICDI RecName: Full=Cysteine--tRNA ligase, cytoplasmic; AltName:
Full=Cysteinyl-tRNA synthetase; Short=CysRS
gi|60465778|gb|EAL63854.1| cysteinyl-tRNA synthetase [Dictyostelium discoideum AX4]
Length = 660
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 93/198 (46%), Positives = 125/198 (63%), Gaps = 20/198 (10%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
++E +FE M+ VLPP TRV+E++P I +++ ++ AY S+ SVYFD +F
Sbjct: 129 KWETAFFEDMKLLNVLPPDALTRVTEYVPQIVEYVEKIISNGFAY-ESNGSVYFDTVAFS 187
Query: 361 H---YFKLWGR---NENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGK 403
Y KL NE + + KRS FDFALWK +KPGEP + S WG+
Sbjct: 188 KAHDYGKLEPNSVGNEKLAAEGEGSLTATSAVSEKRSGFDFALWKKSKPGEPVWNSPWGE 247
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGH 463
GRPGWHIECSAMAS GG +D+H+GG DLKFPHH+NE AQS AF+ QW+NY++H+GH
Sbjct: 248 GRPGWHIECSAMASDLLGGNIDIHSGGSDLKFPHHDNELAQSEAFYGNRQWINYFVHSGH 307
Query: 464 LRGTDGTRRLRAAR-FIT 480
L DG + ++ + FIT
Sbjct: 308 LL-IDGLKMSKSLKNFIT 324
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Query: 6 QSSLALSYATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNH---LKWYACGPTV 62
+S+ A + +T P+W P G +T + I N +T KVPF+ L WYACGPTV
Sbjct: 10 ESTSAAAASTKKPFPEWIKPKGKETELLINNSLTGGKVPFVFNESGKGRSLTWYACGPTV 69
Query: 63 YDSPHIGHAVCNVKLDIIRRILEHY--FHIHSIV 94
YD+ H+GHA + DIIRRI+++Y F+I ++
Sbjct: 70 YDASHMGHARTYISFDIIRRIMKNYLGFNIQYVM 103
>gi|82541403|ref|XP_724944.1| cysteinyl-tRNA synthetase [Plasmodium yoelii yoelii 17XNL]
gi|23479772|gb|EAA16509.1| cysteinyl-tRNA synthetase [Plasmodium yoelii yoelii]
Length = 579
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 131/199 (65%), Gaps = 21/199 (10%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF- 359
++E E++E M+ VL P+ TRVSE++ I FI+ +++ K AY+ S+ SVYFD+D+F
Sbjct: 113 KWEYEFWEDMKSLNVLLPSSITRVSEYVNEIIKFIEKIIENKYAYVSSEGSVYFDIDAFK 172
Query: 360 --PHYFK--------------LWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGK 403
P++F L G + K++ +DFALWKS+KP EP ++S WGK
Sbjct: 173 KNPNHFYARMEPMSVKDETKILEGEGDLGVISKNKKNSYDFALWKSSKPNEPSWDSPWGK 232
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGH 463
GRPGWHIECS MAS+ G +D+H+GGIDL+FPHH+NE AQS AF + SQWVNY+LH+GH
Sbjct: 233 GRPGWHIECSTMASNILGNVLDIHSGGIDLRFPHHDNELAQSEAFFDHSQWVNYFLHSGH 292
Query: 464 L--RGTDGTRRLRAARFIT 480
L G ++ L+ FIT
Sbjct: 293 LHIEGLKMSKSLK--NFIT 309
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 72/107 (67%), Gaps = 3/107 (2%)
Query: 20 PKWSLPSGYD---TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVK 76
PKW++PS + T + + N +T +KV F+ Q N +KWYACGPTVYD+ H+GHA V
Sbjct: 8 PKWTMPSKENKTITNLMVNNSLTHSKVEFVPQEGNTIKWYACGPTVYDAAHLGHARTYVS 67
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
DIIRRIL +YF ++ ++TDIDDKII ++ K ++ +A+++
Sbjct: 68 FDIIRRILTNYFKYDVFMVINITDIDDKIIKRSEEEKVNFTELARKW 114
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V DIIRRIL +YF ++ ++TDIDDKII ++ K ++ +A+++
Sbjct: 60 GHARTYVSFDIIRRILTNYFKYDVFMVINITDIDDKIIKRSEEEKVNFTELARKW 114
>gi|17509795|ref|NP_491013.1| Protein CARS-1, isoform a [Caenorhabditis elegans]
gi|351062877|emb|CCD70915.1| Protein CARS-1, isoform a [Caenorhabditis elegans]
Length = 909
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 184/371 (49%), Gaps = 47/371 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS-------LKEDYKTVAK 196
GHA + LDI+RR+ YF I ++TD+DDKII +A E
Sbjct: 221 GHARSYLSLDILRRVFRDYFGYDVEFIMNITDVDDKIIKRARQSHLLKSYFNESQAPPVM 280
Query: 197 RYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATW 256
+ ++ + H K + +D K K+ V+ K + + + AL +K Q AT
Sbjct: 281 KVCEDVVAALEHFKTKFETEMDPDKKKM--FEVMIK--KVQQQSSALEEAMKAQDSIATE 336
Query: 257 QFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVL 316
+ K + R +S L G VF+ L YE E+ M + VL
Sbjct: 337 EAKGRLLNESRDVLSEWL------DHNHGKDVRDHSVFDDLAK-TYEKEFLADMARLNVL 389
Query: 317 PPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF---PHYF------KLWG 367
P TRVSE++P + ++++ ++ AY D SVYFD +F P +F + +G
Sbjct: 390 PVDVLTRVSEYVPEVITYVKKIISNGYAYAAEDGSVYFDTKAFEQNPKHFYAKLVPEAYG 449
Query: 368 RN-----ENITQHA-----------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIE 411
+ +N+ + KRSP DFALWKS+K GEP++ S WG GRPGWHIE
Sbjct: 450 EDSEQLLKNMKESEGELSMSDDRLKSKRSPNDFALWKSSKDGEPFWPSEWGNGRPGWHIE 509
Query: 412 CSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR--GTDG 469
CS M+S G ++D+H GG DLKFPHH+NE AQ A ++ WVNY+LH G LR G
Sbjct: 510 CSVMSSAICGSKLDIHAGGFDLKFPHHDNEIAQVEAHYDDPHWVNYFLHCGTLRIQGMKM 569
Query: 470 TRRLRAARFIT 480
++ L+ FIT
Sbjct: 570 SKSLK--NFIT 578
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 18 ESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
+ PK + P + +YN +T+ K F+ ++WY CGPTVYDS H+GHA + L
Sbjct: 173 DQPKNATPP---PQLTVYNSLTRQKEVFVPNEGKRVRWYICGPTVYDSSHMGHARSYLSL 229
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
DI+RR+ YF I ++TD+DDKII +A
Sbjct: 230 DILRRVFRDYFGYDVEFIMNITDVDDKIIKRA 261
>gi|119719811|ref|YP_920306.1| cysteinyl-tRNA synthetase [Thermofilum pendens Hrk 5]
gi|187631645|sp|A1RYM3.1|SYC_THEPD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|119524931|gb|ABL78303.1| cysteinyl-tRNA synthetase [Thermofilum pendens Hrk 5]
Length = 474
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 118/180 (65%), Gaps = 8/180 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y +Y E+++K VL RV+E I I F+Q L+D+ AY+ SVYFDVD++P
Sbjct: 92 YTKDYLEALQKLRVLVDVHP-RVTEHISEIIDFVQKLIDSGHAYVAPSGSVYFDVDTYPD 150
Query: 362 YFKLWGR--NENITQH---AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
Y +L GR + +Q + K++P+DFALWK+ KPGEP+++S WG GRPGWHIECS M+
Sbjct: 151 YGRLSGRLDKKMWSQEEFASEKKNPYDFALWKARKPGEPYWDSPWGPGRPGWHIECSVMS 210
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRRLR 474
S + G + D+H GG DL FPHHENE AQS A + WV YW+HTG L RG ++ L+
Sbjct: 211 SKYLGRRFDIHGGGTDLIFPHHENERAQSEALFGEKPWVKYWMHTGMLQVRGEKMSKSLK 270
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRI--LEHYFH 89
+++YN ++++ F + + Y CGPTVYD H+GHA V D+I+R L Y
Sbjct: 2 LRVYNTLSRSLEVFEPVEEGRVSIYVCGPTVYDYSHVGHARTYVAFDVIKRYLRLRGYDV 61
Query: 90 IHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCN 149
+H + ++TDIDDKIIN+A D++ + Y + + +V+ + R +
Sbjct: 62 VH---VQNITDIDDKIINRARDEGRDWREIVDEYTKDYLEALQKLRVLVDVHPRVTEHIS 118
Query: 150 VKLDIIRRILE 160
+D ++++++
Sbjct: 119 EIIDFVQKLID 129
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 15/96 (15%)
Query: 144 GHAVCNVKLDIIRRILE--HYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY--- 198
GHA V D+I+R L Y +H + ++TDIDDKIIN+A D++ + Y
Sbjct: 39 GHARTYVAFDVIKRYLRLRGYDVVH---VQNITDIDDKIINRARDEGRDWREIVDEYTKD 95
Query: 199 FLRLIFKI-----LHQKVVRKLA--IDLKKAKVDSG 227
+L + K+ +H +V ++ ID + +DSG
Sbjct: 96 YLEALQKLRVLVDVHPRVTEHISEIIDFVQKLIDSG 131
>gi|17509797|ref|NP_491014.1| Protein CARS-1, isoform b [Caenorhabditis elegans]
gi|351062878|emb|CCD70916.1| Protein CARS-1, isoform b [Caenorhabditis elegans]
Length = 908
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 184/371 (49%), Gaps = 47/371 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS-------LKEDYKTVAK 196
GHA + LDI+RR+ YF I ++TD+DDKII +A E
Sbjct: 220 GHARSYLSLDILRRVFRDYFGYDVEFIMNITDVDDKIIKRARQSHLLKSYFNESQAPPVM 279
Query: 197 RYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATW 256
+ ++ + H K + +D K K+ V+ K + + + AL +K Q AT
Sbjct: 280 KVCEDVVAALEHFKTKFETEMDPDKKKM--FEVMIK--KVQQQSSALEEAMKAQDSIATE 335
Query: 257 QFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVL 316
+ K + R +S L G VF+ L YE E+ M + VL
Sbjct: 336 EAKGRLLNESRDVLSEWL------DHNHGKDVRDHSVFDDLAK-TYEKEFLADMARLNVL 388
Query: 317 PPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF---PHYF------KLWG 367
P TRVSE++P + ++++ ++ AY D SVYFD +F P +F + +G
Sbjct: 389 PVDVLTRVSEYVPEVITYVKKIISNGYAYAAEDGSVYFDTKAFEQNPKHFYAKLVPEAYG 448
Query: 368 RN-----ENITQHA-----------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIE 411
+ +N+ + KRSP DFALWKS+K GEP++ S WG GRPGWHIE
Sbjct: 449 EDSEQLLKNMKESEGELSMSDDRLKSKRSPNDFALWKSSKDGEPFWPSEWGNGRPGWHIE 508
Query: 412 CSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR--GTDG 469
CS M+S G ++D+H GG DLKFPHH+NE AQ A ++ WVNY+LH G LR G
Sbjct: 509 CSVMSSAICGSKLDIHAGGFDLKFPHHDNEIAQVEAHYDDPHWVNYFLHCGTLRIQGMKM 568
Query: 470 TRRLRAARFIT 480
++ L+ FIT
Sbjct: 569 SKSLK--NFIT 577
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 18 ESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
+ PK + P + +YN +T+ K F+ ++WY CGPTVYDS H+GHA + L
Sbjct: 172 DQPKNATPP---PQLTVYNSLTRQKEVFVPNEGKRVRWYICGPTVYDSSHMGHARSYLSL 228
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
DI+RR+ YF I ++TD+DDKII +A
Sbjct: 229 DILRRVFRDYFGYDVEFIMNITDVDDKIIKRA 260
>gi|196006167|ref|XP_002112950.1| hypothetical protein TRIADDRAFT_25636 [Trichoplax adhaerens]
gi|190584991|gb|EDV25060.1| hypothetical protein TRIADDRAFT_25636 [Trichoplax adhaerens]
Length = 532
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF- 359
+YE E+ E ME VL TR TRV+E I HI FI+ + AY SD SVYF + +
Sbjct: 127 KYEKEFLEDMECLNVLRATRVTRVTEHIDHIIKFIEKIFQHGYAYKTSDGSVYFYTEKYG 186
Query: 360 PHYFKLWGRNENI------TQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL + I + K S DFALWK+AK EP ++S WG GRPGWHIECS
Sbjct: 187 DRYGKLAPSRQTIHKSIDKATDSEKISDRDFALWKAAKADEPCWQSPWGSGRPGWHIECS 246
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM+S FG Q+D+HTGGIDL FPHHENE AQ A+H +QW NY+LHTGHL
Sbjct: 247 AMSSAIFGNQLDIHTGGIDLLFPHHENEIAQCEAYHQINQWTNYFLHTGHL 297
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 70/103 (67%)
Query: 21 KWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDII 80
+W P+GYDTGIK+YN +T +KV I+ WY CGPTVYDSPH+GHA VK DII
Sbjct: 26 QWIQPTGYDTGIKVYNSLTNSKVSLILPQDKLATWYMCGPTVYDSPHLGHASSYVKFDII 85
Query: 81 RRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
RRI+ F I +++ +TDIDDKI+ +A K ++ +A++Y
Sbjct: 86 RRIMTDLFDIDIVMVMGITDIDDKIVQRAADTKTGFRDLARKY 128
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 141 PTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
P GHA VK DIIRRI+ F I +++ +TDIDDKI+ +A K ++ +A++Y
Sbjct: 71 PHLGHASSYVKFDIIRRIMTDLFDIDIVMVMGITDIDDKIVQRAADTKTGFRDLARKY 128
>gi|429852443|gb|ELA27579.1| cysteinyl-trna synthetase [Colletotrichum gloeosporioides Nara gc5]
Length = 800
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 139/392 (35%), Positives = 189/392 (48%), Gaps = 63/392 (16%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL------KEDYKTVAKR 197
GHA V DIIRRI+ HYF + ++TDI I KA K+ T +
Sbjct: 42 GHARNYVSTDIIRRIMMHYFGADVQFVMNITDI----IIKARRQRLLELEKQKKYTEEEL 97
Query: 198 YFLRLI-FKILHQKVVRKLAI---------------DLKKAKVDSGPVLTKCDEFRDELL 241
Y L L F+ +K + LA D +KV +G LT + D+
Sbjct: 98 YNLALTAFRAYAEKSLPLLATSDGQPLDENSYLERRDSAYSKVLAGGTLTGEGKPGDDEA 157
Query: 242 ALGVQIKDQKCEATWQFKDGKVFSDRVFISLP----LYLILIQVSLLGPLTLRTVVFEFL 297
+ I + A + KD K + I LP LY I S T T E L
Sbjct: 158 KTKMHISNMDA-AAFAIKDKKFYPGIDEILLPYLDSLYKETIDTSDQTIFTDLTQSMEKL 216
Query: 298 FNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVD 357
F F+ M+ L P TRV+E++P I +F++ + D AY SD SVYFD+
Sbjct: 217 F--------FDDMDALNCLRPDVITRVTEYVPQIAAFVERIADKGFAY-ESDGSVYFDIT 267
Query: 358 SFPH----YFKL--WGRNENITQH----------AVKRSPFDFALWKSAKPGEPWYESAW 401
+F Y +L RN+ Q KR+ DFALWK +K GEP++ S W
Sbjct: 268 AFEKAGNTYARLRPGNRNDKSLQEDGEGALSKNLGEKRNEGDFALWKKSKKGEPYWPSRW 327
Query: 402 GKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQ-----WVN 456
G+GRPGWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS AF+ + + WVN
Sbjct: 328 GQGRPGWHIECSVMASDILGAQMDIHSGGIDLAFPHHDNELAQSEAFYCEKEKGEHTWVN 387
Query: 457 YWLHTGHL--RGTDGTRRLRAARFITNLSGST 486
+LH GHL G+ ++ L+ + I + +T
Sbjct: 388 NFLHMGHLSISGSKMSKSLKNFQTIQDALATT 419
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 31 GIKIYNPITKTK-VPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
+K++N + + VPF+ + WYACGPTVYD H+GHA V DIIRRI+ HYF
Sbjct: 3 ALKLHNSLRPGQPVPFVPIKPGKVSWYACGPTVYDKSHLGHARNYVSTDIIRRIMMHYFG 62
Query: 90 IHSIVISSVTDI 101
+ ++TDI
Sbjct: 63 ADVQFVMNITDI 74
>gi|443690891|gb|ELT92901.1| hypothetical protein CAPTEDRAFT_218029 [Capitella teleta]
Length = 633
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 187/384 (48%), Gaps = 64/384 (16%)
Query: 159 LEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQKVVRKLAID 218
+ YF+ I ++TDIDDKII +A + K Y + + + L D
Sbjct: 1 MRDYFNYDVIYAMNITDIDDKIIKRARQ-----NHLMKEYLAKDL-------PIASLLND 48
Query: 219 LKKAKVDSGPVL-TKCDEFRDEL---LALGVQIKDQKCEATWQFKDGKVFSDRVFI--SL 272
K+A G L T+ DE + + L V+ ++ E + G+ + V + +
Sbjct: 49 AKEALKPLGDKLKTEEDEDKKTMYAKLEKNVKAAIEQAEKSLADNQGQDEAKTVLLEHAR 108
Query: 273 PLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQ 332
+Y+ + G +F L YE EY E M V PP TRVSE++P +
Sbjct: 109 DVYMEWLDRQF-GKSITDNAIFAALPK-HYEQEYLEDMAALNVEPPECLTRVSEYVPEVV 166
Query: 333 SFIQTLLDTKQAYIGSDHSVYFDVDSFP----HYF-----------KLWGRNE---NITQ 374
F+Q ++D AY + SVYFD F HY+ KL E +I+
Sbjct: 167 EFVQKIIDNGYAY-EAQSSVYFDTAKFSQADNHYYAKLVPEAFGDQKLLQDGEGDLSISD 225
Query: 375 HAV--KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGID 432
+ K+ DFALWK++KPGEP ++S WGKGRPGWHIECS MAS G D+HTGG+D
Sbjct: 226 ERLREKKGQSDFALWKASKPGEPSWDSPWGKGRPGWHIECSIMASTILGESFDIHTGGVD 285
Query: 433 LKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDG---------------------TR 471
LKFPHH+NE AQS A + S WV+Y+LH+GHL DG +R
Sbjct: 286 LKFPHHDNELAQSEAAYGHSHWVHYFLHSGHLH-IDGCKMSKSLKNFITIRQALQRNTSR 344
Query: 472 RLRAARFITNLSGSTIGYTRDTCA 495
+LR A F+ + T+ Y+ DT A
Sbjct: 345 QLRLA-FLLHSWKDTLDYSNDTMA 367
>gi|328849314|gb|EGF98497.1| hypothetical protein MELLADRAFT_46041 [Melampsora larici-populina
98AG31]
Length = 791
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 116/188 (61%), Gaps = 25/188 (13%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
++E +FE M+ V PPT TRVS++IP I+SFI +++ AY S+ S+YFDV +F
Sbjct: 240 KWEHSFFEDMKSLNVEPPTVLTRVSDYIPQIESFISQIMENGYAY-ESNGSIYFDVLAFD 298
Query: 361 H------------YFKL------------WGRNENITQHAVKRSPFDFALWKSAKPGEPW 396
H Y KL G + KRS DFALWK +K GEP
Sbjct: 299 HSTLRSDPSLHHTYAKLSPSSKTNLKLIKEGEGGLSSLMDSKRSTADFALWKRSKAGEPE 358
Query: 397 YESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVN 456
+ES WGKGRPGWHIECS MAS G +D+H+GG+DL FPHH+NE AQS A+H+ QWVN
Sbjct: 359 WESRWGKGRPGWHIECSVMASEVLGNGMDIHSGGVDLMFPHHDNELAQSEAYHDCHQWVN 418
Query: 457 YWLHTGHL 464
Y+LHTGHL
Sbjct: 419 YFLHTGHL 426
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
G+K+YN +TK+K FI + + WY CGPTVYD+ H+GHA V DI+RRI YF
Sbjct: 14 GLKLYNSLTKSKTDFIPRIPGKISWYNCGPTVYDASHMGHARNYVAQDILRRITRDYFKY 73
Query: 91 HSIVISSVTDIDDKIINKA 109
+ ++TDIDDKII +A
Sbjct: 74 EINFVMNITDIDDKIIKRA 92
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 184
GHA V DI+RRI YF + ++TDIDDKII +A
Sbjct: 52 GHARNYVAQDILRRITRDYFKYEINFVMNITDIDDKIIKRA 92
>gi|68072763|ref|XP_678295.1| cysteine--tRNA ligase [Plasmodium berghei strain ANKA]
gi|56498716|emb|CAH94957.1| cysteine--tRNA ligase, putative [Plasmodium berghei]
Length = 582
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 131/201 (65%), Gaps = 19/201 (9%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF- 359
++E E++E M+ VL P+ TRVSE++ I FI+ +++ K AY+ S+ SVYFD+D+F
Sbjct: 113 KWEYEFWEDMKSLNVLLPSSITRVSEYVNEIIKFIEKIIENKYAYVSSEGSVYFDIDAFK 172
Query: 360 --PHYFK--------------LWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGK 403
P++F L G + K++ +DFALWKS+KP EP ++S WGK
Sbjct: 173 KNPNHFYARMEPMSVKDETKILEGEGDLGVISKNKKNSYDFALWKSSKPNEPSWDSPWGK 232
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGH 463
GRPGWHIECS MAS+ G +D+H+GG+DL+FPHH+NE AQS AF + SQWVNY+LH+GH
Sbjct: 233 GRPGWHIECSTMASNILGKVLDIHSGGVDLRFPHHDNELAQSEAFFDHSQWVNYFLHSGH 292
Query: 464 L--RGTDGTRRLRAARFITNL 482
L G ++ L+ I N+
Sbjct: 293 LHIEGLKMSKSLKNFITIKNM 313
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 72/107 (67%), Gaps = 3/107 (2%)
Query: 20 PKWSLPSGYD---TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVK 76
PKW++PS + T + + N +T +KV F+ Q N +KWYACGPTVYD+ H+GHA V
Sbjct: 8 PKWTMPSKENKTITNLMVNNSLTHSKVEFVPQEGNTIKWYACGPTVYDAAHLGHARTYVS 67
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
DIIRRIL +YF ++ ++TDIDDKII ++ K ++ +A+++
Sbjct: 68 FDIIRRILTNYFKYDVFMVINITDIDDKIIKRSEEEKVNFTELARKW 114
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V DIIRRIL +YF ++ ++TDIDDKII ++ K ++ +A+++
Sbjct: 60 GHARTYVSFDIIRRILTNYFKYDVFMVINITDIDDKIIKRSEEEKVNFTELARKW 114
>gi|268565691|ref|XP_002639522.1| Hypothetical protein CBG04128 [Caenorhabditis briggsae]
Length = 584
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/373 (34%), Positives = 186/373 (49%), Gaps = 51/373 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRL- 202
GHA + LDI+RR+ YF I ++TD+DDKII +A + K YF
Sbjct: 66 GHARSYLSLDILRRVFRDYFGYDVEFIMNITDVDDKIIKRARQ-----SHLLKSYFNESQ 120
Query: 203 ---IFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEF-----RDELLALGVQIKDQKCEA 254
+ K+ + VV L KK + ++ P K E +++ AL ++ Q A
Sbjct: 121 APSVVKVC-EDVVAALEHFDKKFENETDPDKKKMLEVMIKKVKEQSDALEKAMEAQDPIA 179
Query: 255 TWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFG 314
T + K + R +S L G VF+ L YE E+ M +
Sbjct: 180 TEEAKGRLLNESRDVLSEWL------DHNHGKDVRDHSVFDDLAK-TYEKEFLADMARLN 232
Query: 315 VLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF---PHYF------KL 365
VLP TRVSE++P + ++++ +++ AY D SVYFD +F P +F +
Sbjct: 233 VLPVDVLTRVSEYVPEVITYVKKIINNGYAYAAEDGSVYFDTKAFEQNPKHFYAKLVPEA 292
Query: 366 WGRNENITQHAV----------------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWH 409
+G + + + KR+P DFALWKS+K GEP++ S WG GRPGWH
Sbjct: 293 YGDDSELLLKNMREGEGELSMSDERLKSKRNPTDFALWKSSKDGEPFWPSEWGNGRPGWH 352
Query: 410 IECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR--GT 467
IECS M+S G ++D+H GG DLKFPHH+NE AQ A ++ WVNY+LH G LR G
Sbjct: 353 IECSVMSSAICGSKLDIHAGGFDLKFPHHDNEIAQVEAHYDDPHWVNYFLHCGTLRIQGM 412
Query: 468 DGTRRLRAARFIT 480
++ L+ FIT
Sbjct: 413 KMSKSLK--NFIT 423
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ +YN +T+ K F+ ++WY CGPTVYDS H+GHA + LDI+RR+ YF
Sbjct: 29 LTVYNSLTRQKEVFVPNEGKRVRWYICGPTVYDSSHMGHARSYLSLDILRRVFRDYFGYD 88
Query: 92 SIVISSVTDIDDKIINKA 109
I ++TD+DDKII +A
Sbjct: 89 VEFIMNITDVDDKIIKRA 106
>gi|296418824|ref|XP_002839025.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635019|emb|CAZ83216.1| unnamed protein product [Tuber melanosporum]
Length = 718
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/344 (36%), Positives = 162/344 (47%), Gaps = 68/344 (19%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V D++RRIL YF + +VTD+DDKII +A
Sbjct: 64 GHARNYVTTDVLRRILRDYFGFDVQFVQNVTDVDDKIILRARQQH--------------- 108
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFK---- 259
+L + + R +I + A V T + + A G + + E TW
Sbjct: 109 --LLEEFISRNSSITPEVAST----VSTAWTAYLKKNTAAGDDVTPENFE-TWAVGAQKE 161
Query: 260 -----DGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFG 314
D K + I LP L Q P VF L ++ +E + E M
Sbjct: 162 IMMILDEKTTNATSSILLPYLDSLNQGREYPP-----EVFSKLTSY-WENHFNEDMATLN 215
Query: 315 VLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENITQ 374
VLPPT TRVSEFIP +F++ L+D AY +D S
Sbjct: 216 VLPPTTVTRVSEFIPENVAFVKKLVDRGFAYPTADGSSLI-----------------ADG 258
Query: 375 HAVKRSPFDFALWKS---AKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGI 431
A K++P DFALWK+ KPGEP ++S WGKGRPGWHIECS M S GGQVD+H+GGI
Sbjct: 259 EASKKTPQDFALWKAFKAEKPGEPSWDSPWGKGRPGWHIECSVMCSEVLGGQVDIHSGGI 318
Query: 432 DLKFPHHENEEAQSCAF-----------HNQSQWVNYWLHTGHL 464
DL FPHH+NE AQS A+ + QWVNY+LH GHL
Sbjct: 319 DLAFPHHDNEIAQSEAYWDGCCDTPKTADGKHQWVNYFLHMGHL 362
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 11 LSYATSCESPKWSLPSGYDTGIK---IYNPITKTKVPF--IIQNKNHLKWYACGPTVYDS 65
++ A+ E P W+ P + + IYN +T+ K F I + + WY CGPTVYD+
Sbjct: 1 MASASRREQPAWTPPPSHGAPLPPLHIYNSLTREKNVFVPIDPSGRRITWYCCGPTVYDA 60
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
H+GHA V D++RRIL YF + +VTD+DDKII +A
Sbjct: 61 GHLGHARNYVTTDVLRRILRDYFGFDVQFVQNVTDVDDKIILRA 104
>gi|195436238|ref|XP_002066076.1| GK22127 [Drosophila willistoni]
gi|194162161|gb|EDW77062.1| GK22127 [Drosophila willistoni]
Length = 491
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 108/170 (63%), Gaps = 7/170 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E+ E M V PP + VS I +IQ FI L+ +QAY+ D+SVYFDV H
Sbjct: 72 YEAEFREDMLSLNVQPPDIRSHVSANIDNIQRFINELISNEQAYVTKDYSVYFDVSKAVH 131
Query: 362 YFKLW-----GRNENITQHAVKRSPFDFALWKSAK-PGEPWYESAWG-KGRPGWHIECSA 414
Y KL E Q KR DFALWK+ K P EP + ++WG +GRPGWHIECSA
Sbjct: 132 YGKLQRADIDSSTEPGEQGTHKRHRSDFALWKAKKFPDEPSWPASWGGEGRPGWHIECSA 191
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
+A FFG ++D H GG+DL+FPHHENEEAQ CA + QWVNYW+HTG L
Sbjct: 192 IAGMFFGRRLDFHAGGLDLRFPHHENEEAQCCARYETDQWVNYWMHTGQL 241
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 53 LKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL 112
+ WY CGPTVYDS H+GHA VK+DII+RIL YF I+ + ++TD+DDKII +A
Sbjct: 2 VSWYTCGPTVYDSAHLGHASTYVKVDIIQRILRDYFRINLVTAMNITDVDDKIIRRARES 61
Query: 113 KEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRIL 159
++ +A+ Y +L V R H N+ D I+R +
Sbjct: 62 GCNWLDMARAYEAEFREDMLSLNVQPP-DIRSHVSANI--DNIQRFI 105
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA VK+DII+RIL YF I+ + ++TD+DDKII +A ++ +A+ Y
Sbjct: 18 GHASTYVKVDIIQRILRDYFRINLVTAMNITDVDDKIIRRARESGCNWLDMARAY 72
>gi|19922218|ref|NP_610930.1| CG8257 [Drosophila melanogaster]
gi|7303228|gb|AAF58291.1| CG8257 [Drosophila melanogaster]
gi|16183283|gb|AAL13681.1| GH24360p [Drosophila melanogaster]
gi|220945642|gb|ACL85364.1| CG8257-PA [synthetic construct]
gi|220955498|gb|ACL90292.1| CG8257-PA [synthetic construct]
Length = 558
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 114/168 (67%), Gaps = 7/168 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E+ + M + V P + V+ +P I FIQ L+D KQAY+ D+SVYFDV +
Sbjct: 139 YEAEFRQDMLRLNVQAPDVRSHVTTTMPVIIQFIQQLIDGKQAYVTPDNSVYFDVSKSKN 198
Query: 362 YFKLWGRNENITQHA---VKRSPFDFALWKSAKPG-EPWYESAWG-KGRPGWHIECSAMA 416
Y KL +N +++ +KR+ DFALWK+ K G EP + + WG +GRPGWHIECSA+A
Sbjct: 199 YGKL--QNLGLSEDKLDPIKRNTADFALWKARKSGSEPTWAAPWGGEGRPGWHIECSAIA 256
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FFG Q+D+H GG+DL+FPHHENEEAQ CA + QWVNYW+HTG L
Sbjct: 257 GLFFGRQLDIHAGGLDLRFPHHENEEAQCCARYKTDQWVNYWVHTGQL 304
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Query: 18 ESP-KWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVK 76
+SP KW P G TGI IYN + KVP I++N + WY CGPTVYDS H+GHA VK
Sbjct: 33 DSPFKWRKPIGQHTGINIYNHGLRQKVPLILRNPQMVTWYTCGPTVYDSAHLGHASTYVK 92
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+DI++RIL YF I+ + ++TD+DDKII +A D++ +A+ Y
Sbjct: 93 VDILQRILRDYFKINLVTAMNITDVDDKIIKRAQLAGLDWQKMARAY 139
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA VK+DI++RIL YF I+ + ++TD+DDKII +A D++ +A+ Y
Sbjct: 85 GHASTYVKVDILQRILRDYFKINLVTAMNITDVDDKIIKRAQLAGLDWQKMARAY 139
>gi|399216934|emb|CCF73621.1| unnamed protein product [Babesia microti strain RI]
Length = 665
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 136/208 (65%), Gaps = 20/208 (9%)
Query: 289 LRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGS 348
L +++F + F ++E++++ M+ GV P TRVSEFIP I FI+ +++ AY S
Sbjct: 145 LVSILF-YDFAKKWEMDFWNDMQILGVRQPNCITRVSEFIPDIIRFIEKIIERGYAY-QS 202
Query: 349 DHSVYFDVDSFP---HYFKLWGRNENITQHAV-----------KRSPFDFALWKSAKPGE 394
SVYFD+ SF +Y ++ + I + + K++P DFALWK AK GE
Sbjct: 203 KGSVYFDITSFSSKHNYARMEHSSVQIKEMTLEGEESFGEVFEKKNPIDFALWKQAKEGE 262
Query: 395 PWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQW 454
P+++S WGKGRPGWHIECS MASH G ++D+H+GGIDL+FPHH+NE AQS A+ ++ W
Sbjct: 263 PFWDSPWGKGRPGWHIECSVMASHLLGDKIDIHSGGIDLRFPHHDNEVAQSEAYFDKYPW 322
Query: 455 VNYWLHTGHL--RGTDGTRRLRAARFIT 480
+NY+LH GHL +G+ ++ L+ FIT
Sbjct: 323 INYFLHFGHLHIQGSKMSKSLK--NFIT 348
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 66/94 (70%), Gaps = 4/94 (4%)
Query: 22 WSLPS---GYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD 78
WS PS + TG+ I N TK+KVPF+ + N +KWY+CGPTVYD H+GHA V D
Sbjct: 53 WSQPSTDGKHLTGLVINNSFTKSKVPFVPEKGNLVKWYSCGPTVYDHAHLGHARTYVTGD 112
Query: 79 IIRRILEHYFHIHSIVISSVTDIDDKIINKANSL 112
IIRRILEH + + ++ ++TD+DDKII++++ L
Sbjct: 113 IIRRILEHLGYRVNFIM-NITDVDDKIISRSSEL 145
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL 187
GHA V DIIRRILEH + + ++ ++TD+DDKII++++ L
Sbjct: 103 GHARTYVTGDIIRRILEHLGYRVNFIM-NITDVDDKIISRSSEL 145
>gi|302698421|ref|XP_003038889.1| hypothetical protein SCHCODRAFT_80995 [Schizophyllum commune H4-8]
gi|300112586|gb|EFJ03987.1| hypothetical protein SCHCODRAFT_80995 [Schizophyllum commune H4-8]
Length = 768
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 117/174 (67%), Gaps = 12/174 (6%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF-- 359
+E +F+ M + V P TRV+E++P I +F+Q ++D AY S SVYFD +F
Sbjct: 241 WEGRFFDDMARLRVRRPDTVTRVTEYVPEIVAFVQKVIDNGYAY-ESAGSVYFDTQAFDA 299
Query: 360 -PHYF--------KLWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHI 410
P++F K ++ ++ A +RS DFALWK++KPGEP++ES WG GRPGWHI
Sbjct: 300 APNHFYAKLEPYSKGNREDDGGSRAAGQRSASDFALWKASKPGEPYWESPWGHGRPGWHI 359
Query: 411 ECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
ECS MAS G +D+H+GG+DL FPHH+NE AQS A+H+ S WVNY+LHTGHL
Sbjct: 360 ECSVMASAILGDNMDIHSGGVDLAFPHHDNEMAQSEAYHDCSAWVNYFLHTGHL 413
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +TK K FI N +KWY CGPTVYD+ H+GHA V DI+RRI+ YF
Sbjct: 19 LKVYNTLTKAKNEFIPSNGRLVKWYNCGPTVYDASHMGHARNYVSQDILRRIMSDYFGYD 78
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TDID+KII++A
Sbjct: 79 VHFVMNITDIDNKIIDRA 96
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 13/89 (14%)
Query: 102 DDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPT------RGHAVCNVKLDII 155
D+ ++ N+L T AK F+P +++ G PT GHA V DI+
Sbjct: 15 DEPVLKVYNTL-----TKAKNEFIPSNGRLVKWYNCG--PTVYDASHMGHARNYVSQDIL 67
Query: 156 RRILEHYFHIHSIVISSVTDIDDKIINKA 184
RRI+ YF + ++TDID+KII++A
Sbjct: 68 RRIMSDYFGYDVHFVMNITDIDNKIIDRA 96
>gi|315055169|ref|XP_003176959.1| cysteinyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
gi|311338805|gb|EFQ98007.1| cysteinyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
Length = 818
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 192/391 (49%), Gaps = 64/391 (16%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS--LKEDYKT-------- 193
GHA V DI+RRI+ YF I ++TD+D+KII +A L +YK
Sbjct: 63 GHARNYVTTDILRRIMRDYFKFDVNFIMNITDVDNKIIIRARQQHLFAEYKDKHPDIDAD 122
Query: 194 ------VAKRYFLRLIFKILH-QKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQ 246
+A F++ +L+ Q+ K + G DE + + + ++
Sbjct: 123 VLQTALLAFSTFVKKQLPLLNFQEQAEKTYAFIFNGGTLEGNKKPGSDEAK---IKMSIK 179
Query: 247 IKDQKCEATWQFKDGKVFS----DRVFISLPLY------------------LILIQVSLL 284
+ Q A + +G S + + ++ P Y + LI + +
Sbjct: 180 SESQAGAAIAKALEGHKKSIEPGNSLGMNAPSYSSVNTQRTNEAFYEACKDVFLIYLDCI 239
Query: 285 GPLTLRTV---VFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDT 341
G ++ + +FE L YE + E M VL P + T+V+ I I F++T++
Sbjct: 240 GCSSICSTDYSLFEALTK-NYESRFLEDMRCLNVLEPDKLTKVTTHISEIIQFVKTIIGN 298
Query: 342 KQAYIGSDHSVYFDVDSFP---HYF---KLWGRNENITQH----------AVKRSPFDFA 385
AY D SVYF+++ F HY+ + W R+ Q K S DF
Sbjct: 299 GFAYSTPDGSVYFNINKFEESGHYYAKLEPWNRHNKHLQRDGEGSLSKGATSKLSRNDFV 358
Query: 386 LWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQS 445
LWK+++PGEP + S WG GRPGWHIECSAMAS FG Q+D+H+GGIDL FPHH+NE AQS
Sbjct: 359 LWKASRPGEPSWPSPWGNGRPGWHIECSAMASANFGSQMDIHSGGIDLAFPHHDNELAQS 418
Query: 446 CAFHNQSQWVNYWLHTGHL--RGTDGTRRLR 474
AF +QWVNY+LH GHL +G+ ++ L+
Sbjct: 419 EAFWGGTQWVNYFLHMGHLSIQGSKMSKSLK 449
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 7/92 (7%)
Query: 20 PKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLK--WYACGPTVYDSPHIGHAVCNVKL 77
P SLP ++++N +T++K F+ + N K WYACGPTVYD H+GHA V
Sbjct: 17 PNRSLPP-----LRVWNSLTRSKTHFVPADPNGQKVTWYACGPTVYDDAHLGHARNYVTT 71
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
DI+RRI+ YF I ++TD+D+KII +A
Sbjct: 72 DILRRIMRDYFKFDVNFIMNITDVDNKIIIRA 103
>gi|312381823|gb|EFR27474.1| hypothetical protein AND_05800 [Anopheles darlingi]
Length = 1017
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/175 (49%), Positives = 109/175 (62%), Gaps = 10/175 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+YE E++ + V PP RV+E IP I F+QTL+D AY D SVYF+ +
Sbjct: 598 KYEAEFWNDLTNLNVQPPDVKLRVTEHIPAIVRFVQTLIDKGYAYRADDGSVYFETSKYE 657
Query: 361 HYFKLWGR-NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGK------GRPGWHIECS 413
Y KL E + KR P DFALWK++KPGEP + S G+ GRPGWHIECS
Sbjct: 658 RYGKLQKVILEPAQESRFKRHPSDFALWKASKPGEPAW-SGEGEAVSVTSGRPGWHIECS 716
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG--HLRG 466
MASH FG ++D H GG+DL+FPHHENEE QSC +H+ WV +W+HTG HL G
Sbjct: 717 TMASHVFGKRLDFHAGGLDLRFPHHENEETQSCCYHDVPDWVTHWIHTGQLHLEG 771
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 30 TGIKIYNPITKTKVPFIIQ-NKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
T +++Y+ TK KVP I K L +Y CGPTVYDS HIGHA C V+LDI++RIL+H+F
Sbjct: 505 TELRLYDGKTKEKVPLSINPQKPFLSFYTCGPTVYDSAHIGHASCYVRLDILQRILKHHF 564
Query: 89 HIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + ++TDIDDKII +AN D++ +A++Y
Sbjct: 565 QLPLVTAMNITDIDDKIIARANERGMDWQALARKY 599
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 41/55 (74%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA C V+LDI++RIL+H+F + + ++TDIDDKII +AN D++ +A++Y
Sbjct: 545 GHASCYVRLDILQRILKHHFQLPLVTAMNITDIDDKIIARANERGMDWQALARKY 599
>gi|292609692|ref|XP_682732.4| PREDICTED: cysteinyl-tRNA synthetase, mitochondrial [Danio rerio]
Length = 566
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 93/193 (48%), Positives = 122/193 (63%), Gaps = 15/193 (7%)
Query: 278 LIQVSL---LGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSF 334
+IQ SL + P+TL + +E E+ + M VLPP RV+E IP I +F
Sbjct: 127 IIQRSLEENISPITLARM---------HEEEFKKDMLALRVLPPVVYMRVTENIPQIIAF 177
Query: 335 IQTLLDTKQAYIGSDHSVYFDVDSFPH-YFKLWGRNENITQHAV--KRSPFDFALWKSAK 391
I+ ++ AY+ S +VYF+ S H Y KL N + V K + DFALWK++K
Sbjct: 178 IERIIGNGHAYVTSQGNVYFNTKSISHRYGKLVNLGGNAGEQGVQDKENSRDFALWKASK 237
Query: 392 PGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQ 451
P EP++ES WG+GRPGWHIECS +AS FG Q+D+H+GGIDL FPHHENE AQS A+H
Sbjct: 238 PFEPYWESPWGQGRPGWHIECSTIASSVFGHQLDIHSGGIDLAFPHHENEIAQSEAYHQC 297
Query: 452 SQWVNYWLHTGHL 464
QW NY+LH+GHL
Sbjct: 298 EQWGNYFLHSGHL 310
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 74/116 (63%), Gaps = 5/116 (4%)
Query: 2 SILSQSSLALSYATSCESPK--WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACG 59
S ++++SL L T+C + W P G+DTG+ YN +TK K P I+ + WY+CG
Sbjct: 23 SGVTKTSL-LCRRTACSRTERGWVKPVGFDTGVTAYNSLTKKKEPLILSQEKIATWYSCG 81
Query: 60 PTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKED 115
PTVYD H+GHA V+ DI++RIL F I+ I + +TDIDDKII + SL+E+
Sbjct: 82 PTVYDHAHLGHACSYVRFDILQRILSRLFGINVIHVMVITDIDDKIIQR--SLEEN 135
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKED 190
GHA V+ DI++RIL F I+ I + +TDIDDKII + SL+E+
Sbjct: 91 GHACSYVRFDILQRILSRLFGINVIHVMVITDIDDKIIQR--SLEEN 135
>gi|198426695|ref|XP_002130035.1| PREDICTED: similar to cysteinyl-tRNA synthetase 2
(mitochondrial)(putative) [Ciona intestinalis]
Length = 523
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 113/170 (66%), Gaps = 9/170 (5%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E+ + +LPP RVSE +P + SFI LL+ + AY+ +V+FDVD F
Sbjct: 124 YENEFKTDLLNLNILPPIAYVRVSEIVPELLSFIYRLLEQRHAYVSKQGNVWFDVDQFTK 183
Query: 362 YFKL------WGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAM 415
KL W +++ + KR DFALWK+AKPGEP++E+ WGKGRPGWH+ECS +
Sbjct: 184 VGKLVPIHQEWKESDSGGE---KRCARDFALWKAAKPGEPYWEAPWGKGRPGWHLECSTI 240
Query: 416 ASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
AS +FG Q+D+H+G DL+FPHHE+E QS AFH + QW NY+LH+G L+
Sbjct: 241 ASLYFGKQIDIHSGASDLEFPHHESEILQSEAFHCEEQWANYFLHSGLLK 290
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 84/147 (57%), Gaps = 6/147 (4%)
Query: 21 KWSLPSGYDTGIKIYNPI-----TKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNV 75
+W LP G+DTGIK+ N K P I+ + H+ WYACGPTVYD HIGHA +
Sbjct: 17 QWKLPKGHDTGIKVKNSYGCLRQQKALAPLIVADPKHVTWYACGPTVYDKTHIGHASSYI 76
Query: 76 KLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQK 135
+ D IRRIL +YF + ++ +T+IDDKII +AN L +++ ++A+ Y +L+
Sbjct: 77 RFDTIRRILTNYFGLTISMVMGITNIDDKIITRANLLNKEFLSMAEHYENEFKTDLLNLN 136
Query: 136 VVGSIP-TRGHAVCNVKLDIIRRILEH 161
++ I R + L I R+LE
Sbjct: 137 ILPPIAYVRVSEIVPELLSFIYRLLEQ 163
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 38/55 (69%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA ++ D IRRIL +YF + ++ +T+IDDKII +AN L +++ ++A+ Y
Sbjct: 70 GHASSYIRFDTIRRILTNYFGLTISMVMGITNIDDKIITRANLLNKEFLSMAEHY 124
>gi|291242855|ref|XP_002741321.1| PREDICTED: cysteinyl-tRNA synthetase 2, mitochondrial-like, partial
[Saccoglossus kowalevskii]
Length = 424
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 114/180 (63%), Gaps = 8/180 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF-- 359
YE E+ M+ VLP T TRV+++IP I F+Q ++DT AY SVYFDV++F
Sbjct: 166 YENEFASDMQALKVLPATVYTRVTDYIPQILVFVQNIIDTGCAYSTPSGSVYFDVEAFGI 225
Query: 360 PHYFKLWGR-NENITQHAV---KRSPFDFALWKSAKPGEPWYESAWG--KGRPGWHIECS 413
Y KL + +H V KR DFALWK+AKPGEPW+ S WG KGRPGWHIECS
Sbjct: 226 ERYAKLMPHVRHDHGRHIVEPEKRHLRDFALWKAAKPGEPWWSSPWGQGKGRPGWHIECS 285
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
M+S FG +D+HTGGIDL FPHH+NE AQ A H QW NY+LH+G L D ++
Sbjct: 286 TMSSAIFGNALDIHTGGIDLAFPHHDNEIAQCEACHQTHQWTNYFLHSGILHLKDDAEKM 345
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 76/106 (71%)
Query: 18 ESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
++ W+ P GY+TG+ +YN +T+TKVP I+Q N KWY CGPTVYDS HIGHA C V+
Sbjct: 61 DASPWAEPEGYNTGVDVYNSLTRTKVPLILQKDNIAKWYMCGPTVYDSAHIGHASCYVRF 120
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
D++RRIL +F I +++ VT+IDDKIIN+A D+K +A+ Y
Sbjct: 121 DVLRRILTEFFDIDVVMVMGVTNIDDKIINRAREKDVDFKQLARIY 166
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA C V+ D++RRIL +F I +++ VT+IDDKIIN+A D+K +A+ Y
Sbjct: 112 GHASCYVRFDVLRRILTEFFDIDVVMVMGVTNIDDKIINRAREKDVDFKQLARIY----- 166
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGKV 263
+ A D++ KV V T+ ++ ++L I D C + G V
Sbjct: 167 --------ENEFASDMQALKVLPATVYTRVTDYIPQILVFVQNIIDTGC--AYSTPSGSV 216
Query: 264 FSDRVFISLPLYLILI 279
+ D + Y L+
Sbjct: 217 YFDVEAFGIERYAKLM 232
>gi|302410221|ref|XP_003002944.1| cysteinyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
gi|261357968|gb|EEY20396.1| cysteinyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
Length = 792
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 133/365 (36%), Positives = 173/365 (47%), Gaps = 64/365 (17%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V DIIRRI+ HYF D K + + + A+R L +
Sbjct: 42 GHARNYVSTDIIRRIMMHYFKA-----------DLKFVMNITDIDDKIIIKARRQRLLEL 90
Query: 204 FK--ILHQKVVRKLAIDLKKAKVD-SGPVLTKCDEFRDEL-------LALGVQIKDQKCE 253
K + KLA+D +A S PVL + +E DE A G D+
Sbjct: 91 EKKKTYSDDELAKLALDAFRAYAQKSLPVLVQDNEALDEDNYLARRDAAYGKPGDDEAKA 150
Query: 254 ---------ATWQFKDGKVFSDRVFISLP----LYLILIQVSLLGPLTLRTVVFEFLFNF 300
A + KD KVF I LP LY + S T T E LF
Sbjct: 151 KMHINNMDAAAFAIKDKKVFPGADEILLPYLDSLYKETVDTSDQTMFTDLTQSMEQLF-- 208
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
F+ M+ VL P TRV+E++P I F+ ++D AY SD SVYFD+ +F
Sbjct: 209 ------FDDMDALNVLRPDVITRVTEYVPQIADFVARIVDKGFAY-ESDGSVYFDITAFE 261
Query: 361 H----YFKL--WGRNENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWGKG 404
Y +L RN+ Q KRS DFALWK +K GEP++ S WG G
Sbjct: 262 KAGNTYARLRPGNRNDKSLQEDGEGALSKNLGEKRSDGDFALWKKSKEGEPYWPSRWGNG 321
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQ-----WVNYWL 459
RPGWHIECS MAS G Q+D+H+GG+DL FPHH+NE AQS A++ + + WV ++L
Sbjct: 322 RPGWHIECSVMASDILGAQMDIHSGGVDLAFPHHDNELAQSEAYYCEQEKGEHTWVRHFL 381
Query: 460 HTGHL 464
H GHL
Sbjct: 382 HMGHL 386
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 32 IKIYNPITKTK-VPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
+K++N ++ + VPF K + WYACGPTVYD H+GHA V DIIRRI+ HYF
Sbjct: 4 LKVHNSLSPGQPVPFDPIEKGKVSWYACGPTVYDKSHLGHARNYVSTDIIRRIMMHYF 61
>gi|223994283|ref|XP_002286825.1| cysteinyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
gi|220978140|gb|EED96466.1| cysteinyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
Length = 807
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 127/364 (34%), Positives = 183/364 (50%), Gaps = 52/364 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVAKRYFLR 201
GHA + DI+RRI+ YFH + + + TDIDDKII +A N L + F +
Sbjct: 79 GHARTYLSFDIMRRIMTDYFHYNVLYQINTTDIDDKIILRARQNELMRLLEEDPSVDFDK 138
Query: 202 LIFKILHQKVVRKLAIDLKKAKVDS--GPVLTKCDEFRDELLALGVQIKDQKCEATWQFK 259
L+ V+ K A++ KAK D G ++ ++ +E + ++ E K
Sbjct: 139 LV-------VLAKEALEEAKAKSDEKKGVIVAAIEKAGEEKNSRARTEQEGLLEQHL-VK 190
Query: 260 DGKVFSDRVFI----------SLPLYLILIQVSLLGPLTLRT----VVFEFLFNF---RY 302
+ D V I L++ S+L R + +FN RY
Sbjct: 191 RKNLDKDEVNILEACGAESGKDARSDLLVAAKSVLAEKLDREKGHLITDHSVFNAHARRY 250
Query: 303 ELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-- 360
E E+ E M G+ P TRV+E++P I +F++T++ AY S+ SVY +D+F
Sbjct: 251 EREFMEDMAALGIREPDILTRVTEYVPKIVAFVETIISKGLAY-KSNGSVYLSLDAFQEA 309
Query: 361 --HYFKL------------------WGRNENITQHAVKRSPFDFALWKSAKPGEPWYESA 400
+Y KL G + + KR+P DFALWK++K GEP +ES
Sbjct: 310 GHNYRKLNPAGPGGAATTAAEMAEGEGALGGVGGDSEKRNPNDFALWKASKAGEPAWESP 369
Query: 401 WGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLH 460
+G GRPGWHIECS +A G ++D+H+GG DLKFPHH+NE AQS A +QWVNY+ H
Sbjct: 370 FGPGRPGWHIECSVVAGDILGERIDIHSGGEDLKFPHHDNELAQSEACFGCNQWVNYFTH 429
Query: 461 TGHL 464
TGHL
Sbjct: 430 TGHL 433
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 50/76 (65%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
+ N +T K PF+ H+KWY CGPTVYDS H+GHA + DI+RRI+ YFH + +
Sbjct: 44 LRNTLTGKKEPFVPMQSRHVKWYTCGPTVYDSSHVGHARTYLSFDIMRRIMTDYFHYNVL 103
Query: 94 VISSVTDIDDKIINKA 109
+ TDIDDKII +A
Sbjct: 104 YQINTTDIDDKIILRA 119
>gi|449483198|ref|XP_002190645.2| PREDICTED: probable cysteine--tRNA ligase, mitochondrial
[Taeniopygia guttata]
Length = 480
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 110/167 (65%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE ++ + M VLPPT RV++ IP I SFI+T++ + QAY S +VYFDV S+
Sbjct: 40 YEEDFKQDMAALKVLPPTVYMRVTDNIPQIISFIETIMSSGQAYATSQGNVYFDVKSWGR 99
Query: 362 -YFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y L N + AV KR DFALWK+AKP E + S WGKGRPGWHIECS ++S
Sbjct: 100 RYGVLTAINPDTQDEAVDSDKRHGKDFALWKAAKPQELSWNSPWGKGRPGWHIECSTISS 159
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+HTGGIDL FPHHENE AQ +H QW NY+LH+GHL
Sbjct: 160 AVFGKQLDIHTGGIDLAFPHHENEIAQCEVYHQCEQWGNYFLHSGHL 206
>gi|367039653|ref|XP_003650207.1| hypothetical protein THITE_2141877 [Thielavia terrestris NRRL 8126]
gi|346997468|gb|AEO63871.1| hypothetical protein THITE_2141877 [Thielavia terrestris NRRL 8126]
Length = 797
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 137/393 (34%), Positives = 179/393 (45%), Gaps = 70/393 (17%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRIL H+F + II KA + E K
Sbjct: 42 GHARNYVSTDIIRRILMHHFGFKVNFV---------IIIKARRKRLLELEKEKPYTAEQV 92
Query: 200 LRLIFKILHQKVVRKLAI----DLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKC--- 252
L+FK L + DL +D L + D +LA G + K
Sbjct: 93 RELVFKAFQAYAASNLPLLTGADL--PALDEHSYLQRRDAAYGSVLAGGTLSGEGKPGDA 150
Query: 253 ------------EATWQFKDGKVFSDRVFISLP----LYLILIQVSLLGPLTLRTVVFEF 296
A +DG F + LP LY I S T T E
Sbjct: 151 EAKVKMHLSNMDSAAKSLRDGSGFDGAEEVLLPYLDSLYKETIDTSDQTIFTDLTQAMEK 210
Query: 297 LFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV 356
FN + M VLPP TRV+E++P I +F+Q ++D AY ++ SVYFD+
Sbjct: 211 AFN--------DDMAALNVLPPDAVTRVTEYVPQIVAFVQKIIDKGFAY-EANGSVYFDI 261
Query: 357 DSFPH----YFKL--WGRNENITQHAV----------KRSPFDFALWKSAKPGEPWYESA 400
+F Y +L RN+ Q K+ P DFALWK +KPGEP++ S
Sbjct: 262 AAFEKAGNTYARLRPESRNDKALQEEGEGSLSKSLEGKKRPGDFALWKKSKPGEPYWPSP 321
Query: 401 WGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCA-FHN----QSQWV 455
WG GRPGWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A FH + WV
Sbjct: 322 WGAGRPGWHIECSVMASDKLGQQMDIHSGGIDLAFPHHDNELAQSEAYFHECGKGEHTWV 381
Query: 456 NYWLHTGHLR--GTDGTRRLRAARFITNLSGST 486
NY+LH GHL G+ ++ L+ + I + +T
Sbjct: 382 NYFLHMGHLSIAGSKMSKSLKNFQTIQDALATT 414
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 32/46 (69%)
Query: 43 VPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
VPF+ + + + WYACGPT YD H+GHA V DIIRRIL H+F
Sbjct: 16 VPFVPREEGKVSWYACGPTTYDLSHLGHARNYVSTDIIRRILMHHF 61
>gi|68063221|ref|XP_673620.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56491605|emb|CAI02493.1| hypothetical protein PB300790.00.0 [Plasmodium berghei]
Length = 386
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 134/212 (63%), Gaps = 21/212 (9%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF- 359
++E E++E M+ VL P+ TRVSE++ I FI+ +++ K AY+ S+ SVYFD+D+F
Sbjct: 113 KWEYEFWEDMKSLNVLLPSSITRVSEYVNEIIKFIEKIIENKYAYVSSEGSVYFDIDAFK 172
Query: 360 --PHYFK--------------LWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGK 403
P++F L G + K++ +DFALWKS+KP EP ++S WGK
Sbjct: 173 KNPNHFYARMEPMSVKDETKILEGEGDLGVISKNKKNSYDFALWKSSKPNEPSWDSPWGK 232
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGH 463
GRPGWHIECS MAS+ G +D+H+GG+DL+FPHH+NE AQS AF + SQWVNY+LH+GH
Sbjct: 233 GRPGWHIECSTMASNILGKVLDIHSGGVDLRFPHHDNELAQSEAFFDHSQWVNYFLHSGH 292
Query: 464 LRGTDGTRRLRAARFITNLSGSTIGYTRDTCA 495
L L+ ++ + N + + TCA
Sbjct: 293 LH----IEGLKMSKSLKNFITINDMFKQYTCA 320
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 72/107 (67%), Gaps = 3/107 (2%)
Query: 20 PKWSLPSGYD---TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVK 76
PKW++PS + T + + N +T +KV F+ Q N +KWYACGPTVYD+ H+GHA V
Sbjct: 8 PKWTMPSKENKTITNLMVNNSLTHSKVEFVPQEGNTIKWYACGPTVYDAAHLGHARTYVS 67
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
DIIRRIL +YF ++ ++TDIDDKII ++ K ++ +A+++
Sbjct: 68 FDIIRRILTNYFKYDVFMVINITDIDDKIIKRSEEEKVNFTELARKW 114
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V DIIRRIL +YF ++ ++TDIDDKII ++ K ++ +A+++
Sbjct: 60 GHARTYVSFDIIRRILTNYFKYDVFMVINITDIDDKIIKRSEEEKVNFTELARKW 114
>gi|194754415|ref|XP_001959490.1| GF12902 [Drosophila ananassae]
gi|190620788|gb|EDV36312.1| GF12902 [Drosophila ananassae]
Length = 559
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 109/175 (62%), Gaps = 3/175 (1%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E+ M + V PP + V+ +P I FIQ L+D AYI S +SVYFDV
Sbjct: 140 YEAEFRRDMLRLNVKPPDVRSHVTSSMPVIIQFIQELIDDNYAYITSSNSVYFDVSKSKE 199
Query: 362 YFKLWGRN-ENITQHAVKRSPFDFALWKSAKP-GEPWYESAWG-KGRPGWHIECSAMASH 418
Y KL E T KR+ DFALWK+ K EP +++ WG +GRPGWHIECSA+A
Sbjct: 200 YGKLAKVTIEEETSSNEKRNSADFALWKARKTQKEPSWQAPWGGEGRPGWHIECSAIAGL 259
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
FFG VD H GG+DL+FPHHENEEAQ CA + QWVNYWLHTG L T R++
Sbjct: 260 FFGRTVDFHAGGLDLRFPHHENEEAQCCARYKTDQWVNYWLHTGQLHLTGDQRKM 314
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 69/102 (67%)
Query: 22 WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
W P+G+ GI IYNP + KVP I+++ + WY CGPTVYD H+GHA VK+DI++
Sbjct: 39 WRKPAGHPVGINIYNPGMRRKVPLILRSPHMATWYTCGPTVYDETHLGHASTYVKVDILQ 98
Query: 82 RILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
RIL YF I+ + ++TD+DDKII +A+ +D+ +A+ Y
Sbjct: 99 RILRDYFKINLVTAMNITDVDDKIIMRASLDGQDWLQLARDY 140
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKAN-------SLKEDYKTVAK 196
GHA VK+DI++RIL YF I+ + ++TD+DDKII +A+ L DY+ +
Sbjct: 86 GHASTYVKVDILQRILRDYFKINLVTAMNITDVDDKIIMRASLDGQDWLQLARDYEAEFR 145
Query: 197 RYFLRLIFK 205
R LRL K
Sbjct: 146 RDMLRLNVK 154
>gi|391865656|gb|EIT74935.1| Cysteinyl-tRNA synthetase [Aspergillus oryzae 3.042]
Length = 531
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 110/168 (65%), Gaps = 4/168 (2%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+YE + M VL P TRV+E+ I F++ ++ Y+ D SVYFD+ SF
Sbjct: 128 KYEEHFMRDMRDLNVLDPDEITRVTEYGQEIADFVEKIVANDFGYVTLDGSVYFDIKSFE 187
Query: 361 HYFKLWGRN-ENITQHAV-KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
+ R+ E HAV KRSP DFALWK+++PGEP ++S WG+GRPGWHIECSAMAS
Sbjct: 188 KAGHPYARDGEGTLSHAVEKRSPDDFALWKASRPGEPSWKSQWGQGRPGWHIECSAMASS 247
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAF--HNQSQWVNYWLHTGHL 464
G Q D+H+GGIDL FPHH+NE AQS A+ + QWVNY+LH GHL
Sbjct: 248 RLGSQNDIHSGGIDLAFPHHDNELAQSEAYWSEKKQQWVNYFLHMGHL 295
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 43 VPFIIQNKNHLK--WYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTD 100
PFI + K WYACGPTVYD H+GHA DIIRRIL+ YF + ++TD
Sbjct: 45 TPFIALDPKGRKVTWYACGPTVYDDAHLGHARNYASTDIIRRILKDYFKFDVEFVMNITD 104
Query: 101 IDDKI 105
+DDK+
Sbjct: 105 VDDKL 109
>gi|297526293|ref|YP_003668317.1| cysteinyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
gi|297255209|gb|ADI31418.1| cysteinyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
Length = 480
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 109/170 (64%), Gaps = 13/170 (7%)
Query: 302 YELEYFESMEKFGV---LPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS 358
Y +Y ES+ K V L P RV+E I I FIQTL+D AYI SVYF+VD
Sbjct: 97 YTRDYLESLRKLNVKVDLHP----RVTEHIKEIIEFIQTLIDKGYAYIAPSGSVYFEVDK 152
Query: 359 FPHYFKLWGR-NENITQH-----AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
+P Y +L GR N+ + + K+ P+DFALWK+ KPGEP++E+ WG+GRPGWHIEC
Sbjct: 153 YPEYGELSGRTNKELWSQEKEFISEKKKPYDFALWKAWKPGEPYWEAPWGRGRPGWHIEC 212
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
S M+S + G Q D+H GG DL FPHHENE AQS A WV YW+HTG
Sbjct: 213 SVMSSRYLGKQFDIHGGGTDLIFPHHENERAQSEAAFGVKPWVKYWVHTG 262
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 72/136 (52%), Gaps = 27/136 (19%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI- 90
IK+YN +T+ F + +K Y CGPTVYD HIGH V D ++R YF +
Sbjct: 7 IKLYNTLTRKIEEFKPVSPGFVKMYVCGPTVYDYNHIGHGRVYVVYDALKR----YFALR 62
Query: 91 --HSIVISSVTDIDDKIINKANSLKEDYKTVAKRY---FLPLIFKILHQKVVGSIPTRGH 145
H I + ++TDIDDKIIN+AN K D++ VA+ Y +L + K+
Sbjct: 63 GYHVIHVMNITDIDDKIINRANREKRDWREVAETYTRDYLESLRKL-------------- 108
Query: 146 AVCNVKLDIIRRILEH 161
NVK+D+ R+ EH
Sbjct: 109 ---NVKVDLHPRVTEH 121
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 7/58 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHI---HSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GH V D ++R YF + H I + ++TDIDDKIIN+AN K D++ VA+ Y
Sbjct: 44 GHGRVYVVYDALKR----YFALRGYHVIHVMNITDIDDKIINRANREKRDWREVAETY 97
>gi|170049121|ref|XP_001870889.1| cysteinyl-tRNA synthetase [Culex quinquefasciatus]
gi|167871024|gb|EDS34407.1| cysteinyl-tRNA synthetase [Culex quinquefasciatus]
Length = 516
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 109/169 (64%), Gaps = 9/169 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RYE E++ +++ V P RV++ IP I F++ L+ AY SD SVYF+ +
Sbjct: 120 RYEQEFWGDLQRLNVRLPDIRLRVTDHIPAIVGFVEALIREGFAYKSSDDSVYFETSRYS 179
Query: 361 HYFKLWGRNENI-----TQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAM 415
Y KL +NI + K+S DFALWK+AKPGEP +ES +G GRPGWHIECS +
Sbjct: 180 QYGKL----QNIPAVEESTSEGKKSAADFALWKAAKPGEPAWESPFGPGRPGWHIECSTL 235
Query: 416 ASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
A+ FG ++D H GG+DL+FPHHENEEAQSC +H WV +W+HTG L
Sbjct: 236 ATQIFGKRLDFHAGGLDLRFPHHENEEAQSCCYHGVPDWVQHWIHTGQL 284
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 32 IKIYNPITKTKVPFIIQN--KNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
I+IY+ + KVP + + + +Y CGPTVYDS HIGHA C V+LDI++RIL +F
Sbjct: 28 IRIYSCKERAKVPLQLASDPSSFTSFYTCGPTVYDSAHIGHASCYVRLDIVQRILRDHFR 87
Query: 90 IHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + ++TDIDDKII +A ++ V++RY
Sbjct: 88 LRLVSAMNITDIDDKIIKRAGEDGRPWQDVSRRY 121
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA C V+LDI++RIL +F + + ++TDIDDKII +A ++ V++RY
Sbjct: 67 GHASCYVRLDIVQRILRDHFRLRLVSAMNITDIDDKIIKRAGEDGRPWQDVSRRY 121
>gi|189423475|ref|YP_001950652.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
gi|229558717|sp|B3E1P0.1|SYC_GEOLS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|189419734|gb|ACD94132.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
Length = 487
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 105/169 (62%), Gaps = 9/169 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY + E M++ G+L PT + ++ I I S IQ L+D AY D VYF V++FP
Sbjct: 92 RYIATFDEDMDRLGMLRPTIEPKATDHIEDIISIIQRLIDNGHAY-AVDGDVYFAVETFP 150
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GRN + KR+P DFALWK +KPGEPW+ES WGKGRPGWHIECS
Sbjct: 151 AYLKLSGRNLDDMLAGARVDVDERKRNPMDFALWKGSKPGEPWWESPWGKGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM+ F G D+H GG DL FPHHENE AQS N Q+V YWLH G
Sbjct: 211 AMSMRFLGPSFDIHGGGKDLVFPHHENEIAQSEG-ANGCQFVKYWLHNG 258
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+++YN ++ K PF+ + + Y CG TVYD HIGHA + D+I R L F
Sbjct: 2 ALRLYNTLSGEKEPFVPRVAGKVGMYVCGVTVYDFCHIGHARAGIVFDMIYRYLR--FSG 59
Query: 91 HSIV-ISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + I + TDIDDKIIN+AN DY+T+A RY
Sbjct: 60 YDVTYIRNYTDIDDKIINRANQEGTDYRTIADRY 93
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIV-ISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA + D+I R L F + + I + TDIDDKIIN+AN DY+T+A RY
Sbjct: 40 GHARAGIVFDMIYRYLR--FSGYDVTYIRNYTDIDDKIINRANQEGTDYRTIADRY 93
>gi|313228816|emb|CBY17967.1| unnamed protein product [Oikopleura dioica]
Length = 636
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 121/189 (64%), Gaps = 19/189 (10%)
Query: 293 VFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSV 352
+F+ L + +E +YFE M+ + P TRVSE++P I +F++ +++ AY S+ SV
Sbjct: 105 IFDALPRY-WEKKYFEDMQALNIEDPDCLTRVSEYVPEIVTFVEKIIEHGYAY-ESNGSV 162
Query: 353 YFDVDSFP----HYF-----KLWGRNENITQ--------HAVKRSPFDFALWKSAKPGEP 395
YF VD F HY+ + G E + + + KRS DFALWK++KPGEP
Sbjct: 163 YFKVDHFDSSSNHYYAKLVPEAVGNREALAEGEGSLAAAASEKRSESDFALWKNSKPGEP 222
Query: 396 WYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWV 455
++S WGKGRPGWHIECS MAS G +D+H+GG+DLKFPHH+NE AQS A+H WV
Sbjct: 223 SWDSPWGKGRPGWHIECSVMASDIMGKTMDIHSGGVDLKFPHHDNELAQSEAYHANDNWV 282
Query: 456 NYWLHTGHL 464
Y+LHTGHL
Sbjct: 283 QYFLHTGHL 291
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 56/92 (60%)
Query: 18 ESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
E +W+LP +K+ N +T++K F + +KWY+CGPTVYD H+GHA V
Sbjct: 7 ERWQWTLPEDKTPKLKVNNSLTRSKDEFRTADGKTVKWYSCGPTVYDHSHMGHARSYVSF 66
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
DIIRRIL YF ++TDIDDKII ++
Sbjct: 67 DIIRRILRDYFGYDVFYQINITDIDDKIIKRS 98
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 12/104 (11%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V DIIRRIL YF ++TDIDDKII ++ RY+ +
Sbjct: 58 GHARSYVSFDIIRRILRDYFGYDVFYQINITDIDDKIIKRSTVTDNSIFDALPRYWEKKY 117
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQI 247
F+ D++ ++ LT+ E+ E++ +I
Sbjct: 118 FE------------DMQALNIEDPDCLTRVSEYVPEIVTFVEKI 149
>gi|198456470|ref|XP_001360335.2| GA20936 [Drosophila pseudoobscura pseudoobscura]
gi|198135626|gb|EAL24910.2| GA20936 [Drosophila pseudoobscura pseudoobscura]
Length = 556
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 108/167 (64%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E+ + M + V PP T V+ +P I FI+ L++ AY+ D+SVYFDV +PH
Sbjct: 139 YEAEFKQDMLRLNVQPPDIRTHVTSNMPAIVQFIEELINDSHAYVTEDNSVYFDVSKYPH 198
Query: 362 YFKL--WGRNENITQHAVKRSPFDFALWKSAKPG-EPWYESAWG-KGRPGWHIECSAMAS 417
Y KL G + K++ DFALWK+ K EP + + WG +GRPGWHIECSA+A
Sbjct: 199 YGKLQRLGMSTEEKSDLFKQNSADFALWKAKKEADEPSWAAPWGGEGRPGWHIECSAIAG 258
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FFG ++D H GG+DL+FPHHENEEAQ C + QWVNYW+HTG L
Sbjct: 259 FFFGHKLDFHAGGLDLRFPHHENEEAQCCVRYQTDQWVNYWMHTGQL 305
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 70/102 (68%)
Query: 22 WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
W P G T I++YN + KVP I++N+N + WY CGPTVYDS H+GHA VK+DII+
Sbjct: 38 WHKPMGQHTDIRVYNNGMRRKVPLILRNQNMVTWYTCGPTVYDSAHLGHASTYVKVDIIQ 97
Query: 82 RILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
RIL +YF+I+ + ++TD+DDKII KA D+ +A+ Y
Sbjct: 98 RILRNYFNINLVTAMNITDVDDKIIRKARDSGCDWLGMARTY 139
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA VK+DII+RIL +YF+I+ + ++TD+DDKII KA D+ +A+ Y
Sbjct: 85 GHASTYVKVDIIQRILRNYFNINLVTAMNITDVDDKIIRKARDSGCDWLGMARTY 139
>gi|83768602|dbj|BAE58739.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 531
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 110/168 (65%), Gaps = 4/168 (2%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+YE + M VL P TRV+E+ I F++ ++ Y+ D SVYFD+ SF
Sbjct: 128 KYEEHFMRDMRDLNVLDPDEITRVTEYGQEIADFVEKIVTNDFGYVTLDGSVYFDIKSFE 187
Query: 361 HYFKLWGRN-ENITQHAV-KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
+ R+ E HAV KRSP DFA+WK+++PGEP ++S WG+GRPGWHIECSAMAS
Sbjct: 188 KAGHPYARDGEGTLSHAVEKRSPDDFAIWKASRPGEPSWKSQWGQGRPGWHIECSAMASS 247
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAF--HNQSQWVNYWLHTGHL 464
G Q D+H+GGIDL FPHH+NE AQS A+ + QWVNY+LH GHL
Sbjct: 248 RLGSQNDIHSGGIDLAFPHHDNELAQSEAYWSEKKQQWVNYFLHMGHL 295
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 43 VPFIIQNKNHLK--WYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTD 100
PFI + K WYACGPTVYD H+GHA DIIRRIL+ YF + ++TD
Sbjct: 45 TPFIALDPKGRKVTWYACGPTVYDDAHLGHARNYASTDIIRRILKDYFKFDVEFVMNITD 104
Query: 101 IDDKI 105
+DDK+
Sbjct: 105 VDDKL 109
>gi|195149692|ref|XP_002015790.1| GL10829 [Drosophila persimilis]
gi|194109637|gb|EDW31680.1| GL10829 [Drosophila persimilis]
Length = 556
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 108/167 (64%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E+ + M + V PP T V+ +P I FI+ L++ AY+ D+SVYFDV +PH
Sbjct: 139 YEAEFKQDMLRLNVQPPDIRTHVTSNMPAIVQFIEELINDSHAYVTEDNSVYFDVSKYPH 198
Query: 362 YFKL--WGRNENITQHAVKRSPFDFALWKSAKPG-EPWYESAWG-KGRPGWHIECSAMAS 417
Y KL G + K++ DFALWK+ K EP + + WG +GRPGWHIECSA+A
Sbjct: 199 YGKLQRLGMSTEEKSDLFKQNSADFALWKAKKEADEPSWAAPWGGEGRPGWHIECSAIAG 258
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FFG ++D H GG+DL+FPHHENEEAQ C + QWVNYW+HTG L
Sbjct: 259 FFFGHKLDFHAGGLDLRFPHHENEEAQCCVRYQTDQWVNYWMHTGQL 305
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 69/102 (67%)
Query: 22 WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
W P G T I+IYN + KVP I++N N + WY CGPTVYDS H+GHA VK+DII+
Sbjct: 38 WHKPMGQHTDIRIYNNGMRRKVPLILRNPNMVTWYTCGPTVYDSAHLGHASTYVKVDIIQ 97
Query: 82 RILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
RIL +YF+I+ + ++TD+DDKII KA D+ +A+ Y
Sbjct: 98 RILRNYFNINLVTAMNITDVDDKIIRKARDSGCDWLGMARTY 139
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA VK+DII+RIL +YF+I+ + ++TD+DDKII KA D+ +A+ Y
Sbjct: 85 GHASTYVKVDIIQRILRNYFNINLVTAMNITDVDDKIIRKARDSGCDWLGMARTY 139
>gi|363729057|ref|XP_416955.3| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial
[Gallus gallus]
Length = 572
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 110/167 (65%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF-P 360
YE ++ + M VLPPT RV+E IP I SFI+T++ QAY S +VYFDV+S+
Sbjct: 131 YEEDFKQDMASLKVLPPTVYMRVTENIPQIISFIKTIIANGQAYATSQGNVYFDVNSWGE 190
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y L + + AV KR DFALWK+AKP E + S WGKGRPGWHIECS ++S
Sbjct: 191 RYGVLTAVSPDTQGEAVDTDKRHGRDFALWKAAKPQELSWSSPWGKGRPGWHIECSTISS 250
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+HTGGIDL FPHHENE AQ +H QW NY+LH+GHL
Sbjct: 251 AVFGKQLDIHTGGIDLAFPHHENEIAQCEVYHQCEQWGNYFLHSGHL 297
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 74/133 (55%), Gaps = 15/133 (11%)
Query: 21 KWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDII 80
+W P+G G+ YN +++K P ++ WY+CGPTVYD H+GHA V+ DII
Sbjct: 29 EWVPPAGRACGVVAYNSRSRSKEPLVLAKDGVATWYSCGPTVYDHAHLGHACSYVRFDII 88
Query: 81 RRILEHYFHIHSIVISSVTDIDDKIINKANSL-----------KEDYKT-VAKRYFLPLI 128
RRIL +F I++ +TDIDDKII +AN + +ED+K +A LP
Sbjct: 89 RRILTRFFETEVIMVMGITDIDDKIIRRANEMNISPVALARIYEEDFKQDMASLKVLP-- 146
Query: 129 FKILHQKVVGSIP 141
++ +V +IP
Sbjct: 147 -PTVYMRVTENIP 158
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL +F I++ +TDIDDKII +AN + +A+ Y
Sbjct: 77 GHACSYVRFDIIRRILTRFFETEVIMVMGITDIDDKIIRRANEMNISPVALARIY 131
>gi|406866457|gb|EKD19497.1| cysteinyl-tRNA synthetase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 781
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/361 (33%), Positives = 180/361 (49%), Gaps = 47/361 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRI+ YF + ++TD+DDKII KA + E KT ++
Sbjct: 44 GHARNYVSTDIIRRIMRDYFGYELKFVMNITDVDDKIILKARRERLLALEKEKTYSEADL 103
Query: 200 LRLI---FKILHQKVVRKLAI------------DLKKAKVDSGPVLTKCDEFRDELLALG 244
+L F+ Q + +L D KV +G LT + D +
Sbjct: 104 SQLAATAFQSYAQGNLPELPKEGLSPSNYAQRRDAAYGKVLAGGTLTGEGKAGDAEAKMK 163
Query: 245 VQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPL-TLRTVVFEFLFNFRYE 303
+ + + A ++ ++F I LP L + S+ G ++ T V + +E
Sbjct: 164 MHLANLTT-AAQGIQENRIFGGADEILLPYLDSLYKESIDGSDHSIFTKVTK-----HWE 217
Query: 304 LEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYF 363
++ E M+ VL P TRV+ + HI ++ ++ AY ++ SVYFD+ +F
Sbjct: 218 DDFMEDMQSLNVLKPDIITRVTAYCEHIVRYVDKIVQKGFAY-ETEGSVYFDIAAFEKAG 276
Query: 364 KLWGR------NENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPG 407
+ R N+ Q KR DFALWK +KPGEP+++S WGKGRPG
Sbjct: 277 NPYARLRPDSKNDTALQEEGEGSLSKSVGGKRGAGDFALWKKSKPGEPFWDSPWGKGRPG 336
Query: 408 WHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFH----NQSQWVNYWLHTGH 463
WHIECS MAS G ++D+H+GGIDL FPHH+NE AQS A++ ++ WV Y++H GH
Sbjct: 337 WHIECSVMASDVLGSEMDIHSGGIDLAFPHHDNELAQSEAYYCEHGHEHNWVRYFMHMGH 396
Query: 464 L 464
L
Sbjct: 397 L 397
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Query: 32 IKIYNPIT-KTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+K++N + VPF+ + + + WY CGPTVYD H+GHA V DIIRRI+ YF
Sbjct: 6 LKVHNSLKPGAPVPFVPKEEGKVSWYVCGPTVYDHSHLGHARNYVSTDIIRRIMRDYFGY 65
Query: 91 HSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYFLPLIFKILHQKVVGSIP 141
+ ++TD+DDKII KA + E KT ++ L G++P
Sbjct: 66 ELKFVMNITDVDDKIILKARRERLLALEKEKTYSEADLSQLAATAFQSYAQGNLP 120
>gi|258570935|ref|XP_002544271.1| cysteinyl-tRNA synthetase [Uncinocarpus reesii 1704]
gi|237904541|gb|EEP78942.1| cysteinyl-tRNA synthetase [Uncinocarpus reesii 1704]
Length = 692
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 121/196 (61%), Gaps = 22/196 (11%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+E + ++ TRVSEFIP I SF++ ++ AY+ D SVYFD+ +F
Sbjct: 134 RFEDRFMADARALNIIDADEVTRVSEFIPEIVSFVEQIVQHNFAYVTGDGSVYFDIAAFE 193
Query: 361 ----HYFKL--WGRNEN----------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKG 404
HY +L W RN+ I + KRS DFALWK++KPGEP + S WG G
Sbjct: 194 TVGNHYARLEPWNRNDTALQADGEGALINKSIEKRSKADFALWKASKPGEPSWPSPWGPG 253
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS----QWVNYWLH 460
RPGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE AQS A+ ++ QWVNY+LH
Sbjct: 254 RPGWHIECSAMASARLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHKGCSHDQWVNYFLH 313
Query: 461 TGHL--RGTDGTRRLR 474
GHL +G+ ++ L+
Sbjct: 314 MGHLSIQGSKMSKSLK 329
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 60/107 (56%), Gaps = 8/107 (7%)
Query: 14 ATSCESPKWSLPSGYDT------GIKIYNPITKTKVPFIIQNKNHLK--WYACGPTVYDS 65
A E P W PS +KI+N +T++KVPF+ + K WYACGPTVYD
Sbjct: 2 AAPREQPPWKQPSATPELTSRLPPLKIWNSLTRSKVPFVPLDPEGRKVTWYACGPTVYDD 61
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL 112
H+GHA V DI+RR+L YF I ++TD+DDK KA+ +
Sbjct: 62 AHLGHARNYVSTDILRRLLRDYFKFDVRFIMNITDVDDKPDTKADVM 108
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 23/117 (19%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL-------------KED 190
GHA V DI+RR+L YF I ++TD+DDK KA+ + ED
Sbjct: 65 GHARNYVSTDILRRLLRDYFKFDVRFIMNITDVDDKPDTKADVMLAYLDKLHGSSICGED 124
Query: 191 YKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQI 247
Y IF L ++ + D + + +T+ EF E+++ QI
Sbjct: 125 YS----------IFTKLTKRFEDRFMADARALNIIDADEVTRVSEFIPEIVSFVEQI 171
>gi|358398304|gb|EHK47662.1| hypothetical protein TRIATDRAFT_193353 [Trichoderma atroviride IMI
206040]
Length = 770
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 174/360 (48%), Gaps = 42/360 (11%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V DIIRRI++ YF V + I SL + F
Sbjct: 64 GHAKNYVSTDIIRRIMKDYFGFR--VKFTKAAFSHYIEKNLPSLP---SHTSPENFPEAA 118
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGKV 263
+K K +L+ A +T D L LG I + A GK+
Sbjct: 119 YKAYEAK--SELSPLADAATTKQSQAVTVAD------LLLGAHIGTARSAAEALRAPGKL 170
Query: 264 FSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNF--RYELEYFESMEKFGVLPPTRA 321
F++ ++L + L + + E ++E + E M VLPP +
Sbjct: 171 PE---FLAKTDDILLPYLDALHGADIDSNNHEIYLELSQKFERRFLEDMNALNVLPPDQL 227
Query: 322 TRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH----YFKL--WGRNENITQ- 374
TRV+E++P I F++ ++ Y D SVYF++DSF Y +L W +N+ + Q
Sbjct: 228 TRVTEYVPQIVRFVEKIVANGFGYACPDGSVYFNIDSFEKAGHSYSRLEPWNKNDRVLQA 287
Query: 375 ---------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVD 425
++KRS DFALWK++KPGEP + S WG GRPGWHIECSAMAS G +D
Sbjct: 288 DGEGSLSKGKSMKRSENDFALWKASKPGEPAWPSPWGHGRPGWHIECSAMASDAIGKTID 347
Query: 426 LHTGGIDLKFPHHENEEAQSCAFHNQS----QWVNYWLHTGHLRGTDGTRRLRAARFITN 481
+H+GG+DL+FPHH+NE AQS A+ + QW NY++H G LR R L+ ++ + N
Sbjct: 348 IHSGGVDLRFPHHDNELAQSEAYWSTPDCHVQWTNYFIHIGQLR----IRGLKMSKSLKN 403
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 20 PKWSLPSGYDTGIKIYNPITKTKVPFIIQNKN--HLKWYACGPTVYDSPHIGHAVCNVKL 77
P + P +KIYN +T+T F+ + + WY CGPTVY+ H+GHA V
Sbjct: 13 PPKTQPDAQLPQLKIYNSLTRTNDEFVPVDPTGKMVTWYGCGPTVYEDAHLGHAKNYVST 72
Query: 78 DIIRRILEHYF 88
DIIRRI++ YF
Sbjct: 73 DIIRRIMKDYF 83
>gi|47226781|emb|CAG06623.1| unnamed protein product [Tetraodon nigroviridis]
Length = 499
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 107/165 (64%), Gaps = 2/165 (1%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF-P 360
YE E+ M V+PP RV+E +P I SFI+ +++ AY + VYFD+ S
Sbjct: 105 YEDEFKRDMLSLKVIPPAVYLRVTENVPQIVSFIERIIENGHAYAAREGDVYFDIKSIGE 164
Query: 361 HYFKLWGRNENITQHAV-KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHF 419
Y K G ++ + KR DFALWK +K GEP +ES WG+GRPGWHIECS +AS
Sbjct: 165 RYGKFGGAADSQPEPGSHKRDARDFALWKRSKAGEPSWESPWGRGRPGWHIECSTIASTV 224
Query: 420 FGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQS A+H QW NY+LH+GHL
Sbjct: 225 FGSQLDIHSGGIDLAFPHHENEIAQSEAYHQCGQWANYFLHSGHL 269
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 61/89 (68%)
Query: 21 KWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDII 80
KW+ PSG+DTG+K++N +TK K P I+ + WY+CGPTVYD H+GHA V+ DI+
Sbjct: 3 KWTKPSGFDTGLKVFNSLTKQKEPLILAREGVATWYSCGPTVYDHAHLGHACSYVRFDIV 62
Query: 81 RRILEHYFHIHSIVISSVTDIDDKIINKA 109
+RIL F I I VTDIDDKII ++
Sbjct: 63 QRILTRLFGITVIHAMVVTDIDDKIIKRS 91
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 184
GHA V+ DI++RIL F I I VTDIDDKII ++
Sbjct: 51 GHACSYVRFDIVQRILTRLFGITVIHAMVVTDIDDKIIKRS 91
>gi|149057584|gb|EDM08827.1| rCG43187, isoform CRA_a [Rattus norvegicus]
Length = 549
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/167 (54%), Positives = 107/167 (64%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
+E E+ + M VLPPT RV+E IP I SFIQ ++ AY + SVYFD+ +
Sbjct: 128 FEEEFKQDMAALKVLPPTVYLRVTENIPQIISFIQGIIAHGHAYATATGSVYFDLRARGD 187
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL + T V KR DFALWK AKP E ++ S WG GRPGWHIECSAMAS
Sbjct: 188 KYGKLVNTVPSATAEPVDSDKRHSSDFALWKGAKPQEVFWASPWGDGRPGWHIECSAMAS 247
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+HTGGIDL FPHHENE AQS FH QW NY+LH+GHL
Sbjct: 248 EVFGSQLDIHTGGIDLAFPHHENEIAQSEVFHQCQQWGNYFLHSGHL 294
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 65/102 (63%)
Query: 22 WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
W P G DTG++++N +T K P I+ + + WY+CGPTVYD H+GHA V+ DIIR
Sbjct: 27 WQRPQGQDTGVQVHNSLTGKKEPLIVGRSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIR 86
Query: 82 RILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
RIL F + ++ S+TD+DDKII +AN + ++A +
Sbjct: 87 RILTSVFGCNVVMAMSITDVDDKIIKRANEMNVSPASLASLF 128
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + ++ S+TD+DDKII +AN + ++A +
Sbjct: 74 GHACSYVRFDIIRRILTSVFGCNVVMAMSITDVDDKIIKRANEMNVSPASLASLF 128
>gi|392569603|gb|EIW62776.1| hypothetical protein TRAVEDRAFT_26341 [Trametes versicolor
FP-101664 SS1]
Length = 778
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 184/365 (50%), Gaps = 46/365 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA------NSLKEDYKTVAKR 197
GHA V D++RRI+ YF + ++TDIDDKII A ++L+ + +++
Sbjct: 57 GHARNYVTQDVLRRIMTDYFRYDVYFVMNITDIDDKIIIGARHKHLISTLRSETTALSQA 116
Query: 198 YFLRLI---FKILHQKVVRKL-AIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCE 253
++I + KV + L A DL A + + F+D+ L KD+K E
Sbjct: 117 LIDQVIDAWISYVQSKVGKGLPAADLPPAGSERAQWPKLVERFQDKEWRLQGLQKDEKFE 176
Query: 254 ---------------ATWQFKDGKVFSDRVFISLPLYLILIQVSL---LGPLTLRTVVFE 295
A K G+ ++ + ++ ++L G +F
Sbjct: 177 MHYKAANVTYNALLAAEEHLKSGQTHTEHAHALIEQAKDVLALTLDKQFGSTVSDHTIFR 236
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFD 355
L + +E E+F M + V P TRV+E++P I SF++ ++ Y D SVYFD
Sbjct: 237 SLAAY-WESEFFNDMRRLRVREPDTLTRVTEYVPEIVSFVEGIVKNGYGY-EVDGSVYFD 294
Query: 356 VDSFPH-----YFKL--WGRNEN---------ITQHAVKRSPFDFALWKSAKPGEPWYES 399
+F Y KL W + ++ +RS DFALWK++KPGEP + S
Sbjct: 295 TRAFDKADDHSYAKLEPWSKGNRELLEEGEGALSATTGRRSAADFALWKASKPGEPSWPS 354
Query: 400 AWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWL 459
WG GRPGWHIECS MAS FG +D+H+GGIDL FPHH+NE AQS A+HN WVNY++
Sbjct: 355 PWGPGRPGWHIECSVMASAIFGENMDIHSGGIDLAFPHHDNEMAQSEAYHNCPAWVNYFI 414
Query: 460 HTGHL 464
HTGHL
Sbjct: 415 HTGHL 419
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 16 SCESPKWSLPS--GYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
+ + P WSLP+ + +KIYN +T+TK F+ + H+KWY CGPTVYD+ H+GHA
Sbjct: 2 AVQQPPWSLPTQKAPEPTLKIYNSLTRTKTEFVPISGRHVKWYNCGPTVYDASHMGHARN 61
Query: 74 NVKLDIIRRILEHYF 88
V D++RRI+ YF
Sbjct: 62 YVTQDVLRRIMTDYF 76
>gi|410928500|ref|XP_003977638.1| PREDICTED: probable cysteine--tRNA ligase, mitochondrial-like
[Takifugu rubripes]
Length = 562
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 107/165 (64%), Gaps = 2/165 (1%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF-P 360
YE E+ M V+PP RV+E +P I +FI ++ AY + VYFD+ S
Sbjct: 140 YEEEFKRDMLSLKVIPPAVYLRVTENVPQIVAFIDRIIKNGHAYTTQEGDVYFDIKSIGE 199
Query: 361 HYFKLWGRNENITQHAV-KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHF 419
Y K G ++ + KR DFALWK +K GEP++ES WG+GRPGWHIECS +AS
Sbjct: 200 RYGKFGGAADSQPEPGSHKRDARDFALWKKSKAGEPYWESPWGRGRPGWHIECSTIASTV 259
Query: 420 FGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQS A+H +QW NY+LH+GHL
Sbjct: 260 FGSQLDIHSGGIDLAFPHHENEIAQSEAYHQCAQWANYFLHSGHL 304
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 95/185 (51%), Gaps = 26/185 (14%)
Query: 3 ILSQSSLALSYATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTV 62
I S S+ ++ +W+ PSG+DTG+K++N +TK K P I+ + WY+CGPTV
Sbjct: 20 ISSARSVHTGPCSNISGTEWTKPSGFDTGLKVFNSLTKQKEPLILAREGVATWYSCGPTV 79
Query: 63 YDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINK-----------ANS 111
YD H+GHA V+ DI++RIL F I I +TDIDDKII + A+
Sbjct: 80 YDHAHLGHACSYVRFDIVQRILSKLFGITVIHAMVITDIDDKIIKRSWEENICSTVIASM 139
Query: 112 LKEDYK--TVAKRYFLPLIFKILHQKV------VGSIPTRGHAVCNVKLDIIRRILEHYF 163
+E++K ++ + P ++ + + V + I GHA + D+ YF
Sbjct: 140 YEEEFKRDMLSLKVIPPAVYLRVTENVPQIVAFIDRIIKNGHAYTTQEGDV-------YF 192
Query: 164 HIHSI 168
I SI
Sbjct: 193 DIKSI 197
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 184
GHA V+ DI++RIL F I I +TDIDDKII ++
Sbjct: 86 GHACSYVRFDIVQRILSKLFGITVIHAMVITDIDDKIIKRS 126
>gi|301606905|ref|XP_002933053.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial-like
[Xenopus (Silurana) tropicalis]
Length = 572
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 110/169 (65%), Gaps = 8/169 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY S +VYFDV S
Sbjct: 146 YEQDFKQDMTALKVLPPTVYMRVTENIPQIISFIEHIIANGYAYATSQGNVYFDVQSIGE 205
Query: 362 YFKLWG------RNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAM 415
+ + +E+ +Q KR DFALWK++KP EP++ S WGKGRPGWHIECS +
Sbjct: 206 RYGKFNDSFSDTASESASQD--KRHIRDFALWKTSKPEEPYWASPWGKGRPGWHIECSTI 263
Query: 416 ASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AS FG +D+HTGGIDL FPHHENE AQ A+H +QW NY+LHTGHL
Sbjct: 264 ASSVFGKHLDIHTGGIDLAFPHHENEIAQCEAYHQSTQWGNYFLHTGHL 312
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Query: 11 LSYATSCESPK--WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHI 68
S C SP W+ PSG+DTGIK+YN +T+ K P I+ + WY+CGPTVYD H+
Sbjct: 32 FSCGNVCASPAGCWAPPSGHDTGIKVYNSLTRRKDPLILADPTVATWYSCGPTVYDHAHL 91
Query: 69 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
GHA V+ DIIRRIL F I ++V+ VTDIDDKII +A L +A+ Y
Sbjct: 92 GHACSYVRFDIIRRILLKVFGIDTVVVMVVTDIDDKIIKRAKELNISPVALARTY 146
>gi|346980154|gb|EGY23606.1| cysteinyl-tRNA synthetase [Verticillium dahliae VdLs.17]
Length = 804
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 133/367 (36%), Positives = 176/367 (47%), Gaps = 56/367 (15%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRI+ HYF + ++TDIDDKII KA + E KT +
Sbjct: 42 GHARNYVSTDIIRRIMMHYFKADLKFVMNITDIDDKIIIKARRQRLLELEKKKTYSDDEL 101
Query: 200 LRLIFKILHQKVVRKLAI-----------------DLKKAKVDSGPVLTKCDEFRDELLA 242
+L + L + D KV +G LT + D+
Sbjct: 102 AKLALDAFRAYAQKSLPVLVQDNEALDEDNYLARRDAAYGKVLAGGTLTGTGKPGDDEAK 161
Query: 243 LGVQIKDQKCEATWQFKDGKVFSDRVFISLP----LYLILIQVSLLGPLTLRTVVFEFLF 298
+ I + A + KD +F I LP LY + S T T E LF
Sbjct: 162 AKMHINNMDA-AAFAIKDKNIFPGADEILLPYLDSLYKETVDTSDQTMFTDLTQSMEQLF 220
Query: 299 NFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS 358
F+ M+ VL P TRV+E++P I F+ ++D AY SD SVYFD+ +
Sbjct: 221 --------FDDMDALNVLRPDVITRVTEYVPQIADFVARIVDKGFAY-ESDGSVYFDITA 271
Query: 359 FPH----YFKL--WGRNENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWG 402
F Y +L RN+ Q KRS DFALWK +K GEP++ S WG
Sbjct: 272 FEKAGNTYARLRPGNRNDKSLQEDGEGALSKNLGEKRSDGDFALWKKSKEGEPYWPSRWG 331
Query: 403 KGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQ-----WVNY 457
GRPGWHIECS MAS G Q+D+H+GG+DL FPHH+NE AQS A++ + + WV +
Sbjct: 332 DGRPGWHIECSVMASDILGAQMDIHSGGVDLAFPHHDNELAQSEAYYCEQEKGEHTWVRH 391
Query: 458 WLHTGHL 464
+LH GHL
Sbjct: 392 FLHMGHL 398
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 32 IKIYNPITKTK-VPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
+K++N ++ + VPF K + WYACGPTVYD H+GHA V DIIRRI+ HYF
Sbjct: 4 LKVHNSLSPGQPVPFDPIEKGKVSWYACGPTVYDKSHLGHARNYVSTDIIRRIMMHYF 61
>gi|429217462|ref|YP_007175452.1| cysteinyl-tRNA synthetase [Caldisphaera lagunensis DSM 15908]
gi|429133991|gb|AFZ71003.1| cysteinyl-tRNA synthetase [Caldisphaera lagunensis DSM 15908]
Length = 476
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 107/171 (62%), Gaps = 11/171 (6%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y ++Y ++ K + RV+ I I +FIQ L+D AY+ SVYF VD +P+
Sbjct: 92 YAIDYLNNLNKLNIKIDIHP-RVTNHINEIINFIQNLIDKGYAYVSQSGSVYFSVDKYPN 150
Query: 362 YFKL--------WGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L W + E I K++P+DFALWKS K GEP++ES WGKGRPGWHIECS
Sbjct: 151 YGRLSNNFNKAYWNQGEGIVSE--KKNPYDFALWKSYKEGEPYWESPWGKGRPGWHIECS 208
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
M+S + G ++D+H GG DL FPHHENE AQS A+ S WV YWLHT L
Sbjct: 209 VMSSRYLGNKIDIHGGGSDLIFPHHENEIAQSEAYFGSSPWVKYWLHTSML 259
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 27/139 (19%)
Query: 24 LPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRI 83
+ + Y ++I+NP ++ V Y CGPTVYD HIGHA V D I+R
Sbjct: 4 IQNTYGKKVEIFNPWNESIVNM----------YVCGPTVYDYTHIGHARTFVVFDAIKRY 53
Query: 84 LEHYFHIHSIV-ISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPT 142
L ++IV + ++TDIDDKIIN+A ++ +A Y + + +
Sbjct: 54 LS--LKGYNIVYVQNITDIDDKIINRAKEKNVPWQEIANTYAIDYLNNL----------- 100
Query: 143 RGHAVCNVKLDIIRRILEH 161
N+K+DI R+ H
Sbjct: 101 ---NKLNIKIDIHPRVTNH 116
>gi|407926032|gb|EKG19003.1| Aminoacyl-tRNA synthetase class 1a Anticodon-binding protein
[Macrophomina phaseolina MS6]
Length = 805
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 171/379 (45%), Gaps = 71/379 (18%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII-------------NKANSLKED 190
GHA V DIIRRI+ YF + ++TD+DDKII +K L ++
Sbjct: 58 GHARNYVSTDIIRRIMRDYFKFDVRFVMNITDVDDKIILRGRQQYLLAQFTSKHPHLDDE 117
Query: 191 YKTVAKRYFLRLIFKILHQKVVRKLAIDLK------------------KAKVDSGPVLTK 232
+ AK+ F + +K + L DLK KA GP K
Sbjct: 118 TLSTAKKAFEAYL-----KKNLSLLPADLKPDSYAEESKKAYGHVLAGKAVEGDGPPGDK 172
Query: 233 CDEFRDELLALGVQIKDQKCEATWQFKDGKVFSDRVFISLP----LYLILIQVSLLGPLT 288
+ + L + ++ + LP LY I + T
Sbjct: 173 EAKVKMHLKTASAAAEALILAEAKTISVTDFYTKTEDVLLPYLDALYGSTIDANDHSIFT 232
Query: 289 LRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGS 348
T FE F E + L P TRV+E+ I F+ ++ Y+ S
Sbjct: 233 RLTKKFEDRF--------MEDVRALNCLDPDVVTRVTEYSQQIVDFVDKVVKNGFGYVTS 284
Query: 349 DHSVYFDVDSFPH----YFKL--WGRNEN----------ITQHAVKRSPFDFALWKSAKP 392
D SVYFD+ +F Y +L W RN+ + KRS DFALWKS+KP
Sbjct: 285 DGSVYFDIQAFERDGNPYARLEPWNRNDKDLLADGEGALSKKSTEKRSDADFALWKSSKP 344
Query: 393 GEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS 452
GEP + S WG+GRPGWHIECSAMAS G ++D+H+GGIDL FPHH+NE AQS AF +
Sbjct: 345 GEPAWPSPWGQGRPGWHIECSAMASDVLGAKIDIHSGGIDLAFPHHDNELAQSEAFWAEC 404
Query: 453 -------QWVNYWLHTGHL 464
QW+NY+LH GHL
Sbjct: 405 KHDNLSHQWINYFLHMGHL 423
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 20 PKWSLPSGYDT--GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
P W P + +YN +T++KVPF+ + WYACGPTVYD H+GHA V
Sbjct: 7 PPWQPPQARPDLPPLHVYNSLTRSKVPFVPIEDKKVTWYACGPTVYDDAHLGHARNYVST 66
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKII 106
DIIRRI+ YF + ++TD+DDKII
Sbjct: 67 DIIRRIMRDYFKFDVRFVMNITDVDDKII 95
>gi|82236042|sp|Q6DJ95.1|SYCM_XENTR RecName: Full=Probable cysteine--tRNA ligase, mitochondrial;
AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS;
Flags: Precursor
gi|49522960|gb|AAH75287.1| albumin [Xenopus (Silurana) tropicalis]
Length = 572
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 110/169 (65%), Gaps = 8/169 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY S +VYFDV S
Sbjct: 146 YEQDFKQDMTALKVLPPTVYMRVTENIPQIISFIEHIIANGYAYATSQGNVYFDVQSIGE 205
Query: 362 YFKLWG------RNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAM 415
+ + +E+ +Q KR DFALWK++KP EP++ S WGKGRPGWHIECS +
Sbjct: 206 RYGKFNDSFSDTASESASQD--KRHIRDFALWKTSKPEEPYWASPWGKGRPGWHIECSTI 263
Query: 416 ASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AS FG +D+HTGGIDL FPHHENE AQ A+H +QW NY+LHTGHL
Sbjct: 264 ASSVFGKHLDIHTGGIDLAFPHHENEIAQCEAYHQSTQWGNYFLHTGHL 312
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Query: 11 LSYATSCESPK--WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHI 68
S C SP W+ PSG+DTGIK+YN +T+ K P I+ + WY+CGPTVYD H+
Sbjct: 32 FSCGNVCASPAGCWAPPSGHDTGIKVYNSLTRRKDPLILADPTVATWYSCGPTVYDHAHL 91
Query: 69 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
GHA V+ DIIRRIL F I ++V+ VTDIDDKII +A L +A+ Y
Sbjct: 92 GHACSYVRFDIIRRILLKVFGIDTVVVMVVTDIDDKIIKRAKELNISPVALARTY 146
>gi|218884115|ref|YP_002428497.1| cysteinyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
gi|218765731|gb|ACL11130.1| cysteinyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
Length = 481
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 107/167 (64%), Gaps = 7/167 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y +Y ++EK V RVSE I I FIQ L+D AYI S SVYF+VD +
Sbjct: 98 YTRDYLSALEKLNV-TIDHHPRVSEHINEIIGFIQGLIDKGYAYIASSGSVYFNVDKYDD 156
Query: 362 YFKLWGR--NENITQH----AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAM 415
Y L GR E Q + KR+P+DFALWK+AKPGEP++ES WG+GRPGWHIECS M
Sbjct: 157 YGHLSGRVSKETWGQEQEFLSEKRNPYDFALWKAAKPGEPYWESPWGRGRPGWHIECSVM 216
Query: 416 ASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
+S + G + D+H GG DL FPHHENE AQS AF WV+ W+H+G
Sbjct: 217 SSRYLGSRFDIHGGGTDLIFPHHENERAQSEAFFGSKPWVSIWMHSG 263
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 26 SGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILE 85
G IKIY+ +++ +K Y CGPTVYD HIGH V D +R L
Sbjct: 2 GGMLPAIKIYDTLSRDLKELQPIEPGIVKMYVCGPTVYDYTHIGHGKTYVIYDAFKRYLS 61
Query: 86 HYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ H + + ++TDIDDKII ++ D+ + Y
Sbjct: 62 LRGY-HVVHVMNITDIDDKIIKRSQDEGRDWSEIVDEY 98
>gi|195334248|ref|XP_002033796.1| GM20229 [Drosophila sechellia]
gi|194125766|gb|EDW47809.1| GM20229 [Drosophila sechellia]
Length = 558
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 112/168 (66%), Gaps = 7/168 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E+ + M + V + V+ +P I FIQ L+ KQAY+ D+SVYFDV +
Sbjct: 139 YEAEFRQDMLRLNVQAADVRSHVTTTMPVIIQFIQQLIAEKQAYVTPDNSVYFDVSKSKN 198
Query: 362 YFKLWGRNENITQHA---VKRSPFDFALWKSAKPG-EPWYESAWG-KGRPGWHIECSAMA 416
Y KL +N +++ +KR+ DFALWK+ K G EP + + WG +GRPGWHIECSA+A
Sbjct: 199 YGKL--QNLGLSEDKLDPIKRNTADFALWKARKSGSEPTWAAPWGGEGRPGWHIECSAIA 256
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FFG Q+D+H GG+DL+FPHHENEEAQ CA + QWVNYWLHTG L
Sbjct: 257 GLFFGRQLDIHAGGLDLRFPHHENEEAQCCARYKTDQWVNYWLHTGQL 304
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Query: 18 ESP-KWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVK 76
+SP KW P G TGI IYN + KVP I++N + WY CGPTVYDS H+GHA VK
Sbjct: 33 DSPFKWRKPIGQHTGINIYNHGLRQKVPLILRNPQMVTWYTCGPTVYDSAHLGHASTYVK 92
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+DI++RIL YF I+ + ++TD+DDKII +A D++ +A+ Y
Sbjct: 93 VDILQRILRDYFKINLVTAMNITDVDDKIIKRAQLAGLDWQKMARAY 139
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA VK+DI++RIL YF I+ + ++TD+DDKII +A D++ +A+ Y
Sbjct: 85 GHASTYVKVDILQRILRDYFKINLVTAMNITDVDDKIIKRAQLAGLDWQKMARAYEAEFR 144
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLA 242
+L V A D++ + PV+ +F +L+A
Sbjct: 145 QDMLRLNVQ---AADVRSHVTTTMPVII---QFIQQLIA 177
>gi|124028047|ref|YP_001013367.1| cysteinyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
gi|123978741|gb|ABM81022.1| Cysteinyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
Length = 490
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 114/182 (62%), Gaps = 13/182 (7%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y +YFE + + RV+ I I FI+ L+D AY+ SVYF+VD +P
Sbjct: 105 YAKDYFEGLRALRIKIDMHP-RVTSHIREIIEFIEGLIDKGYAYVAPSGSVYFEVDKYPD 163
Query: 362 YFKL--------WGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L W + E++ + K++P+DFALWK+ KPGEP++E+ WG+GRPGWHIECS
Sbjct: 164 YGRLSGRFHPEEWRQEEDVLKE--KKNPYDFALWKAWKPGEPYWEAPWGRGRPGWHIECS 221
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTR 471
MAS + G Q D+H GG DL FPHHENE AQS A+ + WV YWLHTG+L RG ++
Sbjct: 222 VMASRYLGDQFDIHGGGQDLIFPHHENERAQSEAYFGKKPWVRYWLHTGYLTIRGEKMSK 281
Query: 472 RL 473
L
Sbjct: 282 SL 283
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 13/80 (16%)
Query: 53 LKWYACGPTVYDSPHIGHAVCNVKLDIIRRILE----HYFHIHSIVISSVTDIDDKIINK 108
++ Y CGPTVYD H+GHA V D I+R L + +H+ +I TDIDDKIIN+
Sbjct: 36 VRMYVCGPTVYDYTHLGHARTYVAFDAIKRYLRLRGYNVYHVQNI-----TDIDDKIINR 90
Query: 109 ANSLKEDYK----TVAKRYF 124
A +D++ T AK YF
Sbjct: 91 AREEGKDWREIVETYAKDYF 110
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 13/64 (20%)
Query: 144 GHAVCNVKLDIIRRILE----HYFHIHSIVISSVTDIDDKIINKANSLKEDYK----TVA 195
GHA V D I+R L + +H+ +I TDIDDKIIN+A +D++ T A
Sbjct: 52 GHARTYVAFDAIKRYLRLRGYNVYHVQNI-----TDIDDKIINRAREEGKDWREIVETYA 106
Query: 196 KRYF 199
K YF
Sbjct: 107 KDYF 110
>gi|429962006|gb|ELA41550.1| cysteine-tRNA ligase [Vittaforma corneae ATCC 50505]
Length = 481
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 116/185 (62%), Gaps = 9/185 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E+ + ME VL P TRV+E++P I FI+ L D AY S+ SVYF++ +
Sbjct: 100 YEKEFLDEMENLNVLRPDFITRVTEYVPEIVKFIEKLEDKGMAY-ESNGSVYFNLTKYKE 158
Query: 362 YFKL-----WGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
FK NE ++ K+S DF LWK++KPGEP YES WGKGRPGWHIECS MA
Sbjct: 159 TFKYNLLRPETTNEEEEDNSEKKSREDFVLWKASKPGEPIYESKWGKGRPGWHIECSVMA 218
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAA 476
S G ++D+H GGIDL FPHHENE AQ + S WV Y+LHTGHL DG + ++
Sbjct: 219 SEILGKKLDIHAGGIDLAFPHHENEVAQCQGYFGDS-WVKYFLHTGHL-NIDGLKMSKSL 276
Query: 477 R-FIT 480
+ F+T
Sbjct: 277 KNFLT 281
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
+YN +TK F +K Y CGPTVYDSPHIGHA + DIIRR+L YF +
Sbjct: 11 LYNTLTKKCEKFTPNEGTTVKIYICGPTVYDSPHIGHARTYISFDIIRRVLRDYFKYDVM 70
Query: 94 VISSVTDIDDKIINKA 109
+ ++T+IDDKII +A
Sbjct: 71 FVMNITNIDDKIIKRA 86
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 141 PTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 184
P GHA + DIIRR+L YF + + ++T+IDDKII +A
Sbjct: 43 PHIGHARTYISFDIIRRVLRDYFKYDVMFVMNITNIDDKIIKRA 86
>gi|302348041|ref|YP_003815679.1| Cysteinyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
gi|302328453|gb|ADL18648.1| Cysteinyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
Length = 476
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 113/185 (61%), Gaps = 20/185 (10%)
Query: 302 YELEYFESMEKFGV---LPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS 358
Y +Y ES+ + + L P RV+ I I FI L++ AY+ SVYFDVD+
Sbjct: 93 YAQDYLESLSRLNIRVDLHP----RVTSHINEIIDFIGKLIEKGYAYVAPSGSVYFDVDA 148
Query: 359 FPHYFKL--------WGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHI 410
+P Y +L W + E + KR P+DFALWK+AKPGEPW+ES WG+GRPGWHI
Sbjct: 149 YPDYGRLSGNFNKALWDQGEGVVSE--KRHPYDFALWKAAKPGEPWWESPWGRGRPGWHI 206
Query: 411 ECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTD 468
ECS M+S + G ++D+H GG DL FPHHENE AQS + WV YWLHTG L RG
Sbjct: 207 ECSVMSSRYLGSRIDIHGGGSDLIFPHHENERAQSESLFG-GPWVKYWLHTGMLTIRGEK 265
Query: 469 GTRRL 473
++ L
Sbjct: 266 MSKSL 270
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILE----HYFHIHSIVISSVTDIDDKIINKANS 111
Y CGPTVYD HIGHA V D I+R L +H+ +I TDIDDKII +A+
Sbjct: 27 YVCGPTVYDYVHIGHAKTFVAFDGIKRYLSLIGYSVYHVQNI-----TDIDDKIIKRASD 81
Query: 112 LKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRILE 160
+K VA Y + + + + R + N +D I +++E
Sbjct: 82 RGVSWKEVADSYAQDYLESLSRLNIRVDLHPRVTSHINEIIDFIGKLIE 130
>gi|389861640|ref|YP_006363880.1| cysteinyl-tRNA synthetase [Thermogladius cellulolyticus 1633]
gi|388526544|gb|AFK51742.1| cysteinyl-tRNA synthetase [Thermogladius cellulolyticus 1633]
Length = 472
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 107/167 (64%), Gaps = 8/167 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y +Y E + K V RV++ I I FIQ L+D AY+ SVYF+VD +P
Sbjct: 93 YTKDYLEGLSKLKV-TIDHHPRVTDHIKEIIEFIQVLIDKGYAYVAQSGSVYFEVDKYPD 151
Query: 362 YFKLWGR------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAM 415
Y +L GR N+ K+ P+DFALWK++KPGEP++ES WGKGRPGWHIECS M
Sbjct: 152 YGRLSGRASKELWNQEPEFLGEKKKPYDFALWKASKPGEPYWESPWGKGRPGWHIECSVM 211
Query: 416 ASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
+S + GG+ D+H GG DL FPHHENE AQS A++ +WV W+HTG
Sbjct: 212 SSRYLGGRFDIHGGGTDLIFPHHENERAQSEAYYG-GRWVGIWMHTG 257
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRIL--EHYFH 89
+K+YN ++K ++ +K Y CGPTVYD HIGH V D +++ L Y
Sbjct: 3 VKLYNTLSKEVEVLRPVEESTVKMYVCGPTVYDYTHIGHGRTYVVYDALKKYLSIRGYNV 62
Query: 90 IHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
IH + ++TDIDDKII +A S D++ VA Y
Sbjct: 63 IH---VMNITDIDDKIIRRAQSEGRDWREVADEY 93
>gi|320101049|ref|YP_004176641.1| cysteinyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
gi|319753401|gb|ADV65159.1| cysteinyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
Length = 484
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 106/167 (63%), Gaps = 7/167 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y +Y ++EK V RVSE I I FIQ L+D AY+ SVYFDVD +
Sbjct: 98 YTRDYISALEKLNV-KVDHHPRVSEHIDEIIRFIQGLIDKGYAYVAPSGSVYFDVDKYED 156
Query: 362 YFKLWGRNENITQH------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAM 415
Y +L GR T + K++P+DFALWK+AKPGEP++ES WGKGRPGWHIECS M
Sbjct: 157 YGRLSGRESRDTWGQEQEFLSEKKNPYDFALWKAAKPGEPYWESPWGKGRPGWHIECSVM 216
Query: 416 ASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
+S + G + D+H GG DL FPHHENE AQS A+ WV+ W+H+G
Sbjct: 217 SSRYLGSRFDIHGGGTDLIFPHHENERAQSEAYFGSKPWVSIWMHSG 263
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+Y+ +++ +K Y CGPTVYD HIGH V D +R L + H
Sbjct: 8 VKVYDTLSRGLKELRPVEPGIVKMYVCGPTVYDYTHIGHGKTYVIYDAFKRYLSLRGY-H 66
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + ++TDIDDKII +++ D+ + + Y
Sbjct: 67 VVHVMNITDIDDKIIRRSHEEGRDWNEIVEEY 98
>gi|158300888|ref|XP_001238361.2| AGAP011821-PA [Anopheles gambiae str. PEST]
gi|157013377|gb|EAU75859.2| AGAP011821-PA [Anopheles gambiae str. PEST]
Length = 525
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 116/197 (58%), Gaps = 5/197 (2%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RYE E++ +++ V P RV++ IP I F+QTL++ AY +D SVYF+ +
Sbjct: 111 RYEDEFWSDLQRLNVCAPDVKLRVTDHIPAIIRFVQTLVEKGFAYSTADGSVYFETAKYE 170
Query: 361 HYFKLWG---RNENITQHAVKRSPFDFALWKSAKPGEP-WYESAWGKGRPGWHIECSAMA 416
Y KL E+ KR DFALWK++KPGEP W + GRPGWHIECS +A
Sbjct: 171 RYGKLQKVIIEPESNASKGQKRHQSDFALWKASKPGEPFWTAPGFSHGRPGWHIECSTLA 230
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAA 476
SH FG +D H GG+DL+FPHHENEE QSC +H+ WV +WLHTG L T ++ +
Sbjct: 231 SHLFGRTIDFHAGGLDLRFPHHENEETQSCCYHDVPDWVTHWLHTGQLHLEGQTHKMSKS 290
Query: 477 RFITNLSGSTIG-YTRD 492
T G +G Y+ D
Sbjct: 291 LKNTVSIGELLGAYSAD 307
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
Query: 32 IKIYNPITKTKVPFIIQ-NKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+++Y+ K KV I +K++L +Y CGPTVYDS HIGHA C V+LDI++RIL H+FH+
Sbjct: 20 LRLYDGRLKEKVALQIHPSKSYLSFYTCGPTVYDSAHIGHASCYVRLDILQRILRHHFHL 79
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ ++TDIDDKII +A + D++ +A+RY
Sbjct: 80 PLVTAMNITDIDDKIIARALEQQVDWQQLARRY 112
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA C V+LDI++RIL H+FH+ + ++TDIDDKII +A + D++ +A+RY
Sbjct: 58 GHASCYVRLDILQRILRHHFHLPLVTAMNITDIDDKIIARALEQQVDWQQLARRY 112
>gi|402218769|gb|EJT98845.1| cysteinyl-tRNA synthetase [Dacryopinax sp. DJM-731 SS1]
Length = 782
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 116/186 (62%), Gaps = 24/186 (12%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E ++ + M++ V+PP TRV++++ I F+Q ++ AY SV+FD +F H
Sbjct: 238 WEDQFLKDMDRLRVMPPDALTRVTDYVQEIAIFVQRVVKRGWAYEAGS-SVWFDTAAFDH 296
Query: 362 ------------YFKL--WGRNE---------NITQHAVKRSPFDFALWKSAKPGEPWYE 398
Y KL W +N ++T + KRS DFALWK++KPGEP +
Sbjct: 297 AKTQRPDDWEHVYAKLEPWSKNNKKLLEEGEGSLTSTSGKRSASDFALWKASKPGEPSWP 356
Query: 399 SAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYW 458
S WG GRPGWHIECS MAS G Q+DLH+GGIDL FPHH+NE AQS A+H+ QWVNY+
Sbjct: 357 SPWGPGRPGWHIECSVMASEVLGEQMDLHSGGIDLAFPHHDNEMAQSEAYHDCRQWVNYF 416
Query: 459 LHTGHL 464
LHTGHL
Sbjct: 417 LHTGHL 422
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 38/57 (66%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
+KIYN +T+ K FI +KWY CGPTVY++ H+GHA V DI+RRIL YF
Sbjct: 23 LKIYNSLTREKTEFIPIRGRQVKWYNCGPTVYEASHMGHARNYVTQDILRRILSDYF 79
>gi|440898339|gb|ELR49859.1| Cysteinyl-tRNA synthetase, mitochondrial, partial [Bos grunniens
mutus]
Length = 504
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 110/176 (62%), Gaps = 4/176 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E +P I +FI+ L+ AY + +VYFD+ S
Sbjct: 87 YEEDFKQDMAALKVLPPTAYLRVTEHVPQIVAFIERLIANGHAYCTAKGNVYFDLQSRGD 146
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G V KR DFALWK+AKP EP++ S WG GRPGWHIECS +AS
Sbjct: 147 RYGKLVGVAPGPVGEPVDSDKRHTSDFALWKAAKPQEPFWGSPWGDGRPGWHIECSTIAS 206
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
FG Q+D+H+GG+DL FPHHENE AQ AFH QW NY+LH+GHL G ++
Sbjct: 207 LVFGSQLDIHSGGVDLAFPHHENEIAQCEAFHQCPQWGNYFLHSGHLHVKGGGEKM 262
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 38 ITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISS 97
+ + + P I+ + WY+CGPTVYD H+GHA V+ DIIRRIL F +++
Sbjct: 2 LARRRDPLIVSRADAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILSRVFGCTVVMVMG 61
Query: 98 VTDIDDKIINKANSLKEDYKTVAKRY---------FLPLIFKILHQKVVGSIP------- 141
+TD+DDKII +AN + ++A+ Y L ++ + +V +P
Sbjct: 62 ITDVDDKIIRRANEMSVSPASLARLYEEDFKQDMAALKVLPPTAYLRVTEHVPQIVAFIE 121
Query: 142 ---TRGHAVCNVKLDIIRRILEHYFHIHS 167
GHA C K ++ YF + S
Sbjct: 122 RLIANGHAYCTAKGNV-------YFDLQS 143
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F +++ +TD+DDKII +AN + ++A+ Y
Sbjct: 33 GHACSYVRFDIIRRILSRVFGCTVVMVMGITDVDDKIIRRANEMSVSPASLARLY 87
>gi|115401840|ref|XP_001216508.1| hypothetical protein ATEG_07887 [Aspergillus terreus NIH2624]
gi|114190449|gb|EAU32149.1| hypothetical protein ATEG_07887 [Aspergillus terreus NIH2624]
Length = 777
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 123/201 (61%), Gaps = 24/201 (11%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
++E +FE M VL P + TRV+E++P I F++ ++ Y D SVYFD+DSF
Sbjct: 212 KFERRFFEDMNALNVLAPDQLTRVTEYVPQIVRFVEKIVANGFGYATPDGSVYFDIDSFE 271
Query: 361 ----HYFKL--WGRNENITQ----------HAVKRSPFDFALWKSAKPGEPWYESAWGKG 404
+Y +L W +N+ Q ++KR+ FALWK++KPGEP + S WG G
Sbjct: 272 KAGHNYSRLEPWNKNDRALQADGEGSLSKGRSMKRNENHFALWKASKPGEPAWPSPWGYG 331
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHN----QSQWVNYWLH 460
RPGWHIECSAMAS G +D+H+GG+DL+FPHH+NE AQS A+ + Q QW NY++H
Sbjct: 332 RPGWHIECSAMASEVIGKTIDIHSGGVDLRFPHHDNELAQSEAYWSTPGCQVQWTNYFIH 391
Query: 461 TGHLRGTDGTRRLRAARFITN 481
G LR R L+ ++ + N
Sbjct: 392 MGQLR----IRGLKMSKSLKN 408
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 20 PKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNH--LKWYACGPTVYDSPHIGHAVCNVKL 77
P + P +KIYN +T+TK FI + + WY CGPTVY+ H+GHA V
Sbjct: 13 PPKARPDAQLPRLKIYNSLTRTKNDFIPLDPTGKVVTWYGCGPTVYEDAHLGHAKNYVST 72
Query: 78 DIIRRILEHYF 88
DIIRRI++ YF
Sbjct: 73 DIIRRIMQDYF 83
>gi|342320203|gb|EGU12145.1| Hypothetical Protein RTG_01759 [Rhodotorula glutinis ATCC 204091]
Length = 779
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 120/206 (58%), Gaps = 27/206 (13%)
Query: 284 LGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQ 343
LG VF L F +E YF+SM V PT TRVSE+IP I +F++ ++
Sbjct: 218 LGASVTDPAVFRDLAAF-WEDSYFKSMAALHVERPTTLTRVSEYIPEIVTFVEGIVKRGF 276
Query: 344 AYIGSDHSVYFDV-------------DSFPH-YFKL--WGRNE---------NITQHAVK 378
AY G SV+FD D + H Y KL W + ++T K
Sbjct: 277 AYEGGG-SVWFDTVKFEGAKGEGEGDDEWRHTYAKLQPWSKGNRELLEDGEGSLTSTTGK 335
Query: 379 RSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHH 438
RS DFALWKS+KPGEP + S WG GRPGWHIECS MAS G +D+H+GG+DL FPHH
Sbjct: 336 RSAADFALWKSSKPGEPAWPSPWGPGRPGWHIECSVMASAVLGEGMDVHSGGVDLAFPHH 395
Query: 439 ENEEAQSCAFHNQSQWVNYWLHTGHL 464
+NE AQS AFHN QWVNY+LHTGHL
Sbjct: 396 DNEIAQSEAFHNCRQWVNYFLHTGHL 421
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 37 PITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVIS 96
P K KV F+ + + WY CGPTVYD+ H+GHA + DI+RRIL YF +
Sbjct: 13 PEPKLKVDFVTKKPGIVTWYNCGPTVYDASHMGHARNYMAQDIMRRILRDYFGYEVNFVM 72
Query: 97 SVTDIDDKIINKANS--LKEDYKTVAKRYFLPLIFKILHQ 134
++TD+DDKII +A L + Y PL ++L +
Sbjct: 73 NITDVDDKIIVRARQSHLLKKYLAELATSSTPLSSRVLQE 112
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 184
GHA + DI+RRIL YF + ++TD+DDKII +A
Sbjct: 45 GHARNYMAQDIMRRILRDYFGYEVNFVMNITDVDDKIIVRA 85
>gi|432950863|ref|XP_004084647.1| PREDICTED: cysteine--tRNA ligase, mitochondrial-like [Oryzias
latipes]
Length = 561
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 107/166 (64%), Gaps = 3/166 (1%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF-P 360
YE E+ + M V+PP RV+E + I +FI+ ++ AY + VYFDV S
Sbjct: 138 YEEEFKKDMLSLKVIPPVVYLRVTENVHRIVAFIEGIIRNGNAYATKEGDVYFDVQSIGD 197
Query: 361 HYFKLWGRNENITQH--AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
Y + G + + + KR P DFALWK +KP EP++ES WG GRPGWHIECS +ASH
Sbjct: 198 RYGRFTGATGSHGEQGSSSKRDPRDFALWKKSKPREPYWESPWGPGRPGWHIECSTIASH 257
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GG DL FPHHENE AQS A+H QW NY+LH+GHL
Sbjct: 258 IFGNQLDIHSGGADLAFPHHENEMAQSEAYHQCRQWANYFLHSGHL 303
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 2/128 (1%)
Query: 12 SYATSCESPK--WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIG 69
S T C + W PSG+DTG+ +N ++K K P I+ WY+CGPTVYD H+G
Sbjct: 25 SKGTGCGGSERAWVRPSGFDTGVVTFNSLSKKKEPLILARDRVATWYSCGPTVYDQAHLG 84
Query: 70 HAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIF 129
HA V+ DI++R+L F + + +TDIDDKII ++ +++ Y
Sbjct: 85 HACSYVRFDILQRVLSRCFGVVVVHAMVITDIDDKIIQRSWQENVSPAVISRMYEEEFKK 144
Query: 130 KILHQKVV 137
+L KV+
Sbjct: 145 DMLSLKVI 152
>gi|295148062|ref|NP_001171155.1| cysteinyl-tRNA synthetase 2, mitochondrial [Rattus norvegicus]
gi|183986065|gb|AAI66536.1| RGD1311612 protein [Rattus norvegicus]
Length = 550
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/168 (53%), Positives = 106/168 (63%), Gaps = 5/168 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
+E E+ + M VLPPT RV+E IP I SFIQ ++ AY + SVYFD+ +
Sbjct: 128 FEEEFKQDMAALKVLPPTVYLRVTENIPQIISFIQGIIAHGHAYATATGSVYFDLRARGD 187
Query: 361 HYFKLWGRNENITQHAV----KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
Y KL + T KR DFALWK AKP E ++ S WG GRPGWHIECSAMA
Sbjct: 188 KYGKLVNTVPSATAEPAVDSDKRHSSDFALWKGAKPQEVFWASPWGDGRPGWHIECSAMA 247
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
S FG Q+D+HTGGIDL FPHHENE AQS FH QW NY+LH+GHL
Sbjct: 248 SEVFGSQLDIHTGGIDLAFPHHENEIAQSEVFHQCQQWGNYFLHSGHL 295
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 65/102 (63%)
Query: 22 WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
W P G DTG++++N +T K P I+ + + WY+CGPTVYD H+GHA V+ DIIR
Sbjct: 27 WQRPQGQDTGVQVHNSLTGKKEPLIVGRSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIR 86
Query: 82 RILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
RIL F + ++ S+TD+DDKII +AN + ++A +
Sbjct: 87 RILTSVFGCNVVMAMSITDVDDKIIKRANEMNVSPASLASLF 128
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + ++ S+TD+DDKII +AN + ++A +
Sbjct: 74 GHACSYVRFDIIRRILTSVFGCNVVMAMSITDVDDKIIKRANEMNVSPASLASLF 128
>gi|30248074|ref|NP_840144.1| cysteinyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
gi|61216300|sp|Q82Y45.1|SYC_NITEU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|30179959|emb|CAD83954.1| Cysteinyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
Length = 465
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 111/171 (64%), Gaps = 12/171 (7%)
Query: 306 YFESMEK----FGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y ++ME+ GV+ P+ R +E++ + + I++LL+ + AY+ S+ V++DV FP
Sbjct: 92 YIQAMEEDAMALGVISPSFEPRATEYVDSMIAMIESLLNRELAYVASNGDVFYDVRRFPG 151
Query: 362 YFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
Y KL G++ E + KR P DF LWK+AKP EP ++S WGKGRPGWHIECSA
Sbjct: 152 YGKLSGKSLDDLRAGERVEIDTNKRDPLDFVLWKAAKPDEPSWDSPWGKGRPGWHIECSA 211
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
M+ H+ G Q D+H GG DL+FPHHENE AQS H S VNYW+H G +R
Sbjct: 212 MSEHYLGDQFDIHGGGQDLQFPHHENEIAQSEGVHGHSH-VNYWMHNGFVR 261
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIY+ +T+++ FI ++ Y CG TVYD H+GHA V D + R L+
Sbjct: 2 LKIYDTLTRSRREFIPLTPGEVRMYVCGMTVYDYCHLGHARVLVVFDSVVRWLQ-TLGYK 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
I + ++TD+DDKII +A E + + RY +
Sbjct: 61 VIYVRNITDVDDKIIRRALENHEPFSALTARYIQAM 96
>gi|53805250|ref|YP_113028.1| cysteinyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
gi|61216155|sp|Q60BG8.1|SYC_METCA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|53759011|gb|AAU93302.1| cysteinyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
Length = 465
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 104/165 (63%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E GVLPP R +E I I + I TL++ AY+GS+ V++ V SFP+Y +L G
Sbjct: 98 EDERALGVLPPDHEPRATESIDDILAMIGTLIERGHAYVGSNGDVFYAVASFPNYGRLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+N E I KR P DF LWKSAKPGEP++ S WG GRPGWHIECSAM++
Sbjct: 158 KNLDELRAGERIEVDEAKRDPLDFVLWKSAKPGEPFWASPWGPGRPGWHIECSAMSTRCL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG+DL+FPHHENE AQS + +VNYW+H G +R
Sbjct: 218 GAHFDIHGGGMDLQFPHHENEIAQSEGATGE-HFVNYWMHNGFVR 261
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 8/112 (7%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F ++ Y CG TVYD H+GHA V D++ R L H +
Sbjct: 2 LKIYNSLTRQKEEFRPLEPRRVRMYVCGMTVYDYCHLGHARVMVVFDMVARYLRH-LGLK 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILH--QKVVGSIP 141
+ +VTDIDDKII +A E + R+ + +H ++ +G +P
Sbjct: 61 VTYVRNVTDIDDKIIRRAVENGETIGALTARF-----IEAMHEDERALGVLP 107
>gi|296481581|tpg|DAA23696.1| TPA: probable cysteinyl-tRNA synthetase, mitochondrial precursor
[Bos taurus]
Length = 555
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 110/176 (62%), Gaps = 4/176 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E +P I +FI+ L+ AY + +VYFD+ S
Sbjct: 135 YEEDFKQDMAALKVLPPTAYLRVTEHVPQIVAFIERLIANGHAYCTAKGNVYFDLQSRGD 194
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G V KR DFALWK+AKP EP++ S WG GRPGWHIECS +AS
Sbjct: 195 RYGKLVGVAPGPVGEPVDSDKRHTSDFALWKAAKPQEPFWGSPWGDGRPGWHIECSTIAS 254
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
FG Q+D+H+GG+DL FPHHENE AQ AFH QW NY+LH+GHL G ++
Sbjct: 255 LVFGSQLDIHSGGVDLAFPHHENEIAQCEAFHQCPQWGNYFLHSGHLHVKGGGEKM 310
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 88/173 (50%), Gaps = 26/173 (15%)
Query: 14 ATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
A+ W P+GYDTG+K+YN +T+ K P I+ + WY+CGPTVYD H+GHA
Sbjct: 26 ASGARGQGWLQPTGYDTGVKVYNSLTRRKDPLIVSRADAASWYSCGPTVYDHAHLGHACS 85
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY---------F 124
V+ DIIRRIL F +++ +TD+DDKII +AN + ++A+ Y
Sbjct: 86 YVRFDIIRRILSRVFGCTVVMVMGITDVDDKIIRRANEMSVSPASLARLYEEDFKQDMAA 145
Query: 125 LPLIFKILHQKVVGSIP----------TRGHAVCNVKLDIIRRILEHYFHIHS 167
L ++ + +V +P GHA C K ++ YF + S
Sbjct: 146 LKVLPPTAYLRVTEHVPQIVAFIERLIANGHAYCTAKGNV-------YFDLQS 191
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F +++ +TD+DDKII +AN + ++A+ Y
Sbjct: 81 GHACSYVRFDIIRRILSRVFGCTVVMVMGITDVDDKIIRRANEMSVSPASLARLY 135
>gi|302911731|ref|XP_003050554.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731491|gb|EEU44841.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 800
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/367 (36%), Positives = 178/367 (48%), Gaps = 56/367 (15%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRIL+HYF + ++TDIDDKII KA + E KT +K
Sbjct: 42 GHARNYVSTDIIRRILQHYFGFEVNFVMNITDIDDKIIIKARRQRLLELEKNKTYSKDEL 101
Query: 200 LRLIFKILHQKVVRKLAIDLKKAK-----------------VDSGPVLTKCDEFRDELLA 242
L L + L + V +G ++ + D+
Sbjct: 102 RELALAAFRAYAKSSLPLLLNDGEDLDATNYAQRREAGYGGVLAGGTISGEGKPGDDEAK 161
Query: 243 LGVQIKDQKCEATWQFKDGKVFSDRVFISLP----LYLILIQVSLLGPLTLRTVVFEFLF 298
+ + + + A G++F I LP LY I S T T E LF
Sbjct: 162 VKMHLSNMTAAAD-AINGGEIFPGADEILLPYLDSLYKETIDTSDQTMFTDLTQSMEDLF 220
Query: 299 NFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS 358
E M+ VL P TRV+E++P I F++ ++D AY ++ SVYFD+ +
Sbjct: 221 --------MEDMDALNVLRPDVITRVTEYVPQIAKFVERIVDKGFAY-EAEGSVYFDISA 271
Query: 359 FPH----YFKLW--GRNENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWG 402
F Y +L RN+ Q K+SP DFALWK +K GEP++ S WG
Sbjct: 272 FEKAGNTYARLRPDNRNDKSLQEEGEGSLSKNLGGKKSPGDFALWKKSKAGEPYWPSPWG 331
Query: 403 KGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF---HNQSQ--WVNY 457
GRPGWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A+ H + + WVNY
Sbjct: 332 NGRPGWHIECSVMASDVLGAQMDIHSGGIDLAFPHHDNELAQSEAYFCEHGKGEHTWVNY 391
Query: 458 WLHTGHL 464
+LH GHL
Sbjct: 392 FLHMGHL 398
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 32 IKIYNPIT-KTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
+K+YN + VPF+ K + WYACGPTVYD H+GHA V DIIRRIL+HYF
Sbjct: 4 LKLYNSLNPGAPVPFVPIEKGKVAWYACGPTVYDKSHLGHARNYVSTDIIRRILQHYF 61
>gi|114052012|ref|NP_001039409.1| cysteine--tRNA ligase, mitochondrial [Bos taurus]
gi|115502846|sp|Q2KIF8.1|SYCM_BOVIN RecName: Full=Cysteine--tRNA ligase, mitochondrial; AltName:
Full=Cysteinyl-tRNA synthetase; Short=CysRS; Flags:
Precursor
gi|86826764|gb|AAI12655.1| Cysteinyl-tRNA synthetase 2, mitochondrial (putative) [Bos taurus]
Length = 555
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 110/176 (62%), Gaps = 4/176 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E +P I +FI+ L+ AY + +VYFD+ S
Sbjct: 135 YEEDFKQDMAALKVLPPTAYLRVTEHVPQIVAFIERLIANGHAYCTAKGNVYFDLQSRGD 194
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G V KR DFALWK+AKP EP++ S WG GRPGWHIECS +AS
Sbjct: 195 RYGKLVGVAPGPVGEPVDSDKRHTSDFALWKAAKPQEPFWGSPWGDGRPGWHIECSTIAS 254
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
FG Q+D+H+GG+DL FPHHENE AQ AFH QW NY+LH+GHL G ++
Sbjct: 255 LVFGSQLDIHSGGVDLAFPHHENEIAQCEAFHQCPQWGNYFLHSGHLHVKGGGEKM 310
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 88/173 (50%), Gaps = 26/173 (15%)
Query: 14 ATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
A+ W P+GYDTG+K+YN +T+ K P I+ + WY+CGPTVYD H+GHA
Sbjct: 26 ASGARGQGWLQPTGYDTGVKVYNSLTRRKDPLIVSRADAASWYSCGPTVYDHAHLGHACS 85
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY---------F 124
V+ DIIRRIL F +++ +TD+DDKII +AN + ++A+ Y
Sbjct: 86 YVRFDIIRRILSRVFGCTVVMVMGITDVDDKIIRRANEMSVSPASLARLYEEDFKQDMAA 145
Query: 125 LPLIFKILHQKVVGSIP----------TRGHAVCNVKLDIIRRILEHYFHIHS 167
L ++ + +V +P GHA C K ++ YF + S
Sbjct: 146 LKVLPPTAYLRVTEHVPQIVAFIERLIANGHAYCTAKGNV-------YFDLQS 191
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F +++ +TD+DDKII +AN + ++A+ Y
Sbjct: 81 GHACSYVRFDIIRRILSRVFGCTVVMVMGITDVDDKIIRRANEMSVSPASLARLY 135
>gi|260787696|ref|XP_002588888.1| hypothetical protein BRAFLDRAFT_268799 [Branchiostoma floridae]
gi|229274059|gb|EEN44899.1| hypothetical protein BRAFLDRAFT_268799 [Branchiostoma floridae]
Length = 512
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 109/175 (62%), Gaps = 6/175 (3%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF-PHYF 363
E+ M + V PPT TRV+ ++P I +F+Q ++D AY + SVYFDV + Y
Sbjct: 94 EFKRDMVRLRVQPPTVYTRVTNYMPQIITFVQKIIDRGYAYPTDNGSVYFDVRKYGDRYG 153
Query: 364 KLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKG--RPGWHIECSAMASH 418
KL + AV KR DFALWK+ KPGEPW+ S WGKG RPGWHIECS MAS
Sbjct: 154 KLSVPSCFFLSPAVDKEKRGFRDFALWKAGKPGEPWWTSPWGKGKGRPGWHIECSTMASA 213
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
FG Q+D+HTGGIDL FPHHENE AQ A H QW NY+LH GHL T ++
Sbjct: 214 IFGDQLDIHTGGIDLMFPHHENEIAQCEAHHCVPQWANYFLHAGHLHKTSDKDKM 268
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 64/90 (71%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
+YN + + KVP I+ NK+ WY CGPTVYD H+GHA C VK DIIRRI+E +F+I +
Sbjct: 2 VYNSLCRRKVPLILPNKSFASWYQCGPTVYDHAHLGHACCYVKFDIIRRIMEDFFNIDLV 61
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRY 123
++ +TDIDDKII+KA L ++ VA+ +
Sbjct: 62 MVMGITDIDDKIISKARELNMEFTHVAQTF 91
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA C VK DIIRRI+E +F+I +++ +TDIDDKII+KA L ++ VA+ +
Sbjct: 37 GHACCYVKFDIIRRIMEDFFNIDLVMVMGITDIDDKIISKARELNMEFTHVAQTF 91
>gi|400601329|gb|EJP68972.1| tRNA synthetase class I catalytic domain-containing protein
[Beauveria bassiana ARSEF 2860]
Length = 798
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 141/396 (35%), Positives = 188/396 (47%), Gaps = 58/396 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKAN-------SLKEDYKTVAK 196
GHA V D+IRRIL HYF + ++TDIDDKII KA K+ Y T
Sbjct: 42 GHARNYVTSDVIRRILMHYFKFDVKYVMNITDIDDKIIIKARRQRLLDVEKKKQYSTEEV 101
Query: 197 RYFLRLIFKILHQKVVRKL-------------AI-DLKKAKVDSGPVLTKCDEFRDELLA 242
+ F QK + L AI D A V +G LT + D
Sbjct: 102 KQLGLNAFVAYAQKSLPLLIETEPNLNESNYPAIRDKAYATVLAGGTLTGEGKPSDAEAK 161
Query: 243 LGVQIKDQKCEATWQFKDGKVFSDRVFISLP----LYLILIQVSLLGPLTLRTVVFEFLF 298
+ + I + A K G++ I LP LY + S T T E LF
Sbjct: 162 VKMHIANMNV-AAQAIKSGQIHPGCDEILLPYLDSLYKETVDTSDQTMFTDLTKAMEELF 220
Query: 299 NFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS 358
+ ++ VLPP TRV+E++P I F+Q +++ AY +D SVYFD+ +
Sbjct: 221 --------MQDLDSLNVLPPDVITRVTEYVPQIADFVQRIVEKGFAY-EADGSVYFDITA 271
Query: 359 FPHYFKLWGR------NENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWG 402
F + R N+ Q KRSP DFALWK +KPGEP++ S WG
Sbjct: 272 FERAGNTYARLRPDSKNDKALQEEGEGALSTNLGGKRSPGDFALWKKSKPGEPFWPSPWG 331
Query: 403 KGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF-----HNQSQWVNY 457
GRPGWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A+ + WV
Sbjct: 332 DGRPGWHIECSVMASDVLGSQMDIHSGGIDLAFPHHDNELAQSEAYFYEPGKGEHTWVRN 391
Query: 458 WLHTGHLR--GTDGTRRLRAARFITNLSGSTIGYTR 491
+LHTGHL G+ ++ L+ + I + +T R
Sbjct: 392 FLHTGHLHIAGSKMSKSLKNFQTIQDALTTTFNARR 427
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 32 IKIYNPI-TKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
+K++N + VPF+ + + WY CGPTVYD H+GHA V D+IRRIL HYF
Sbjct: 4 LKLHNSLHPGAPVPFVPRQDGKVSWYVCGPTVYDKSHLGHARNYVTSDVIRRILMHYF 61
>gi|156937781|ref|YP_001435577.1| cysteinyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
gi|187629828|sp|A8AB68.1|SYC_IGNH4 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|156566765|gb|ABU82170.1| cysteinyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
Length = 464
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 109/171 (63%), Gaps = 13/171 (7%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y EYFE M+K V P T RV++ I I F+Q L+D AY+ + VYFDVD +P+
Sbjct: 92 YTNEYFELMKKLKVFP-TVHPRVTDHIDDIIEFVQDLVDKGYAYV-TQSGVYFDVDKYPY 149
Query: 362 YF--------KLWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y K+W + E + K++P+DFALWK AKPGEPW++S W KGRPGWHIECS
Sbjct: 150 YGQLSGIKDKKMWSQEEFVKD---KKNPYDFALWKCAKPGEPWWDSPWCKGRPGWHIECS 206
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
M+S + G Q D+H G DL FPHHENE AQS A WV YWLH+G+L
Sbjct: 207 TMSSKYLGKQFDVHGGARDLIFPHHENEIAQSEARFGVRPWVKYWLHSGYL 257
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRI--LEHYFH 89
+K++N +T+ F ++ Y CGPTVYD HIGHA V DII++ L+ Y
Sbjct: 2 LKVFNTLTRRLEDFKPLEPPLVRMYVCGPTVYDHSHIGHARTWVAFDIIKKYLRLKGYNV 61
Query: 90 IHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
IH + ++TDIDDKIIN+A L +K VA Y
Sbjct: 62 IH---VQNITDIDDKIINRARELGVSWKEVADTY 92
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 104 KIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRIL--EH 161
K+ N ED+K + PL+ + V GHA V DII++ L +
Sbjct: 3 KVFNTLTRRLEDFKPLEP----PLVRMYVCGPTVYDHSHIGHARTWVAFDIIKKYLRLKG 58
Query: 162 YFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
Y IH + ++TDIDDKIIN+A L +K VA Y
Sbjct: 59 YNVIH---VQNITDIDDKIINRARELGVSWKEVADTY 92
>gi|114320961|ref|YP_742644.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
gi|114227355|gb|ABI57154.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
Length = 485
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 106/169 (62%), Gaps = 10/169 (5%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E E GVLPP R + I I + I+ L++ AY+ D VYF V S+P Y KL G
Sbjct: 121 EDAEALGVLPPDHEPRATGHIDDIIAMIERLVERGHAYVADDGDVYFAVSSYPEYGKLSG 180
Query: 368 -RNENITQHAV------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
R E++ A KR P DFALWK+A+PGEP + S WG+GRPGWHIECSAM++
Sbjct: 181 ERQEDLRAGARVEVDEGKRDPVDFALWKAARPGEPAWPSPWGEGRPGWHIECSAMSTQVL 240
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-CAFHNQSQWVNYWLHTGHLRGTD 468
G D+H GG+DLKFPHHENE AQS CA +VNYW+H GH+R D
Sbjct: 241 GDHFDIHGGGLDLKFPHHENEIAQSECA--TGHPFVNYWMHNGHVRIND 287
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 29 DTG-IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHY 87
D G + I+N +T+ K F H++ Y CG TVYD H+GHA V D++ R L H
Sbjct: 21 DAGMLHIHNSLTQRKERFEPIQPGHVRMYVCGMTVYDYCHLGHARALVVFDMVARYLRHL 80
Query: 88 FHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQ--KVVGSIPTRGH 145
+ + ++TDIDDKII +A L E V +R+ + +H+ + +G +P
Sbjct: 81 GY-RVTFVRNITDIDDKIIRRAAELGEPMGAVTERF-----IRAMHEDAEALGVLPPDHE 134
Query: 146 AVCNVKLDIIRRILEHYFHIHSIVISSVTDI 176
+D I ++E ++ D+
Sbjct: 135 PRATGHIDDIIAMIERLVERGHAYVADDGDV 165
>gi|348534583|ref|XP_003454781.1| PREDICTED: cysteinyl-tRNA synthetase, mitochondrial-like
[Oreochromis niloticus]
Length = 569
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 108/166 (65%), Gaps = 3/166 (1%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP- 360
YE E+ M V+PP RV+E + HI +FI+ ++ AY + VYFD+ S
Sbjct: 140 YEDEFKRDMLSLKVVPPAVYLRVTENVHHIVAFIEKIIKNGHAYATKEGDVYFDIQSIGG 199
Query: 361 HYFKLWGRNENITQ--HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
Y + G + + + KR P DFALWK +KP EP++ES WG+GRPGWHIECS +AS
Sbjct: 200 RYGRFVGAVDPQGEPGSSNKRDPRDFALWKPSKPQEPYWESPWGRGRPGWHIECSTIASS 259
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQS A+H QW NY+LH+GHL
Sbjct: 260 MFGRQLDIHSGGIDLAFPHHENEIAQSEAYHQCGQWANYFLHSGHL 305
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 89/178 (50%), Gaps = 28/178 (15%)
Query: 12 SYATSCE--SPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIG 69
S+ SC +W PSG+DTG+K +N ++K K P I+ + WY+CGPTVYD H+G
Sbjct: 27 SHGPSCSVSGREWVRPSGFDTGLKTFNSLSKQKEPLILTREGVATWYSCGPTVYDHAHLG 86
Query: 70 HAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA-------NSLKEDYKTVAKR 122
HA V+ DI++RIL F I I +TDIDDKII ++ ++ Y+ KR
Sbjct: 87 HASSYVRFDILQRILSRLFGITVIHAVVITDIDDKIIRRSWEENVSPAAISAVYEDEFKR 146
Query: 123 YFL------PLIFKILHQKV------VGSIPTRGHAVCNVKLDIIRRILEHYFHIHSI 168
L P ++ + + V + I GHA + D+ YF I SI
Sbjct: 147 DMLSLKVVPPAVYLRVTENVHHIVAFIEKIIKNGHAYATKEGDV-------YFDIQSI 197
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 184
GHA V+ DI++RIL F I I +TDIDDKII ++
Sbjct: 86 GHASSYVRFDILQRILSRLFGITVIHAVVITDIDDKIIRRS 126
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 225 DSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFK 259
D P+L CD RD+L LGV IKD+ +TW+ K
Sbjct: 518 DRIPLLKACDALRDDLAPLGVLIKDRGATSTWEIK 552
>gi|401882124|gb|EJT46397.1| cysteine-tRNA ligase [Trichosporon asahii var. asahii CBS 2479]
Length = 795
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 143/273 (52%), Gaps = 37/273 (13%)
Query: 223 KVDSGPVLTKCDEFRDELLALGV----QIKDQKCEATWQFKDGKVFSDRVFISL------ 272
K S P + + ++E L + Q +D A Q + G S +
Sbjct: 170 KAASDPAFVEAGKEKEEKFGLYITSLTQARDAILTAEKQLESGAAGSVDALVDGTASVLG 229
Query: 273 PLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQ 332
P Y ++ P+ + + ++ +E YFE M++ +L P TRVSE++P I
Sbjct: 230 PYYGETKGNTIADPVGVSRDLAQY-----WEQRYFEDMDRLHILRPDVITRVSEYVPEIV 284
Query: 333 SFIQTLLDTKQAYIGSDHSVYFDV--------DSFPHYF-----------KLWGRNEN-I 372
+F+ ++ AY ++ SV+FDV D F H + KL E +
Sbjct: 285 AFVDQIIKNGFAY-EAEGSVWFDVNKFEGSDGDGFRHQYAKLQPSSKGNWKLLDEGEGAL 343
Query: 373 TQHAVKRSPFDFALWKS-AKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGI 431
T KR P DFALWK+ +KPGEP + S WG+GRPGWHIECS MAS G +D+H+GGI
Sbjct: 344 TGTKGKRQPQDFALWKAKSKPGEPAWPSPWGEGRPGWHIECSVMASEILGKNIDIHSGGI 403
Query: 432 DLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
DL FPHH+NE AQS A+H QW+NY+LHTGHL
Sbjct: 404 DLMFPHHDNELAQSEAYHGNKQWINYFLHTGHL 436
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 4 LSQSSLALSYATSCESPKWSLPSGY--DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPT 61
LS S + + A+S W P + +K+YN ITK K F+ N + WY CGPT
Sbjct: 30 LSASPVMSAPASSSTPTVWYPPQKQTDEPVLKVYNSITKNKDTFVATNGRQVDWYNCGPT 89
Query: 62 VYDSPHIGHAVCNVKLDIIRRILEHYF 88
VYD+ H+GHA II R E Y
Sbjct: 90 VYDASHMGHA--RTLSAIIMRAREGYL 114
>gi|345568652|gb|EGX51545.1| hypothetical protein AOL_s00054g244 [Arthrobotrys oligospora ATCC
24927]
Length = 868
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/218 (44%), Positives = 123/218 (56%), Gaps = 29/218 (13%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP- 360
+E + E M + VLPPT TRVSEF+P F+ L+ AY +D SVYFDV ++
Sbjct: 315 WERHFNEDMARLNVLPPTVTTRVSEFVPENVDFVDKLVKKGFAYPTTDGSVYFDVQAYRA 374
Query: 361 ---HYFKL--WGRNEN---------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRP 406
HY KL W + +T K++ DFALWKS+KPGEP ++S WGKGRP
Sbjct: 375 SGHHYAKLKPWDASSTSLLEDGEGALTSQTGKKNSGDFALWKSSKPGEPGWDSPWGKGRP 434
Query: 407 GWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHN------------QSQW 454
GWHIECS M S G VD+H+GGIDL FPHH+NE AQS A+ + + QW
Sbjct: 435 GWHIECSVMCSEVLGPNVDIHSGGIDLAFPHHDNEIAQSEAYWDPCTAADGLQGAEKHQW 494
Query: 455 VNYWLHTGHLR--GTDGTRRLRAARFITNLSGSTIGYT 490
VNY+LH GHL G ++ L+ I G G+T
Sbjct: 495 VNYFLHMGHLSIAGAKMSKSLKNFVSIREALGRGGGWT 532
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 58/102 (56%), Gaps = 9/102 (8%)
Query: 17 CESPKWSLPSGYDTGI-------KIYNPITKTKVPF--IIQNKNHLKWYACGPTVYDSPH 67
E P W P+ + I KIYN +T++K F I + WY CGPTVYD+ H
Sbjct: 73 VEQPPWRSPAANNMRIAAPEAELKIYNSLTRSKTTFYPIDVVGKKVTWYCCGPTVYDAGH 132
Query: 68 IGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
+GHA V D++RR+LE YF + +VTDIDDKII +A
Sbjct: 133 LGHARNYVTTDVLRRVLEGYFGYDVQFVQNVTDIDDKIILRA 174
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 184
GHA V D++RR+LE YF + +VTDIDDKII +A
Sbjct: 134 GHARNYVTTDVLRRVLEGYFGYDVQFVQNVTDIDDKIILRA 174
>gi|187631658|sp|Q0A7N3.2|SYC_ALHEH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 462
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 106/169 (62%), Gaps = 10/169 (5%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E E GVLPP R + I I + I+ L++ AY+ D VYF V S+P Y KL G
Sbjct: 98 EDAEALGVLPPDHEPRATGHIDDIIAMIERLVERGHAYVADDGDVYFAVSSYPEYGKLSG 157
Query: 368 -RNENITQHAV------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
R E++ A KR P DFALWK+A+PGEP + S WG+GRPGWHIECSAM++
Sbjct: 158 ERQEDLRAGARVEVDEGKRDPVDFALWKAARPGEPAWPSPWGEGRPGWHIECSAMSTQVL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-CAFHNQSQWVNYWLHTGHLRGTD 468
G D+H GG+DLKFPHHENE AQS CA +VNYW+H GH+R D
Sbjct: 218 GDHFDIHGGGLDLKFPHHENEIAQSECA--TGHPFVNYWMHNGHVRIND 264
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ I+N +T+ K F H++ Y CG TVYD H+GHA V D++ R L H +
Sbjct: 2 LHIHNSLTQRKERFEPIQPGHVRMYVCGMTVYDYCHLGHARALVVFDMVARYLRHLGY-R 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQ--KVVGSIPTRGHAVCN 149
+ ++TDIDDKII +A L E V +R+ + +H+ + +G +P
Sbjct: 61 VTFVRNITDIDDKIIRRAAELGEPMGAVTERF-----IRAMHEDAEALGVLPPDHEPRAT 115
Query: 150 VKLDIIRRILEHYFHIHSIVISSVTDI 176
+D I ++E ++ D+
Sbjct: 116 GHIDDIIAMIERLVERGHAYVADDGDV 142
>gi|390938721|ref|YP_006402459.1| cysteinyl-tRNA synthetase [Desulfurococcus fermentans DSM 16532]
gi|390191828|gb|AFL66884.1| cysteinyl-tRNA synthetase [Desulfurococcus fermentans DSM 16532]
Length = 478
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 107/167 (64%), Gaps = 7/167 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y +Y ++EK V RVSE I I FIQ L+D AYI SVYF+VD +
Sbjct: 95 YTRDYLSALEKLNV-TIDHHPRVSEHINEIIGFIQGLIDKGYAYIAPSGSVYFNVDKYDD 153
Query: 362 YFKLWGR--NENITQH----AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAM 415
Y +L GR E Q + K++P+DFALWK+AKPGEP++ES WG+GRPGWHIECS M
Sbjct: 154 YGRLSGRVSKETWGQEQEFLSEKQNPYDFALWKAAKPGEPYWESPWGRGRPGWHIECSVM 213
Query: 416 ASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
+S + G + D+H GG DL FPHHENE AQS AF WV+ W+H+G
Sbjct: 214 SSRYLGSRFDIHGGGTDLIFPHHENERAQSEAFFGSRPWVSIWMHSG 260
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
IKIY+ +++ +K Y CGPTVYD HIGH V D +R L +
Sbjct: 4 AIKIYDTLSRDLKELQPIEPGIVKMYVCGPTVYDYTHIGHGKTYVVYDAFKRYLSLRGY- 62
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
H + + ++TDIDDKII ++ D+ + Y
Sbjct: 63 HVVHVMNITDIDDKIIKRSQDEGRDWSEIVDEY 95
>gi|119183429|ref|XP_001242754.1| hypothetical protein CIMG_06650 [Coccidioides immitis RS]
Length = 809
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/361 (33%), Positives = 175/361 (48%), Gaps = 44/361 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA + I R +H F + ++S IDD ++ S E Y +R
Sbjct: 99 GHARNYI---ITRARQQHLFMEY---VTSHPTIDDSVVETITSAYESY--------VRKN 144
Query: 204 FKILHQKVVRKL---AIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQ--- 257
+L + K A+++K V +G L + D + + I+ A
Sbjct: 145 LPLLEHVPIPKAFPEAVEIKYGFVLNGGALGGTGKPGDAEAKIKMHIRTATSAAKALSDI 204
Query: 258 FKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNF--RYELEYFESMEKFGV 315
D F L ++L + L ++R + R+E + E +
Sbjct: 205 ISDPNAMLSETFYDLAQDVVLPYLDNLKGPSIRGEDYSIFTKLSQRFEDRFMEDARALNI 264
Query: 316 LPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP----HYFKL--WGRN 369
L TRV+EFIP I SF++ ++ AY +D SVYFD+ +F Y +L W RN
Sbjct: 265 LDADEVTRVTEFIPEIVSFVEQIVQHGFAYATADGSVYFDIAAFEAAGNQYARLEPWNRN 324
Query: 370 EN----------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHF 419
+ I + KRS DFALWK++K GEP + S WG GRPGWHIECSAMAS
Sbjct: 325 DTALQADGEGALINKAVEKRSKADFALWKASKAGEPSWPSPWGPGRPGWHIECSAMASAR 384
Query: 420 FGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS----QWVNYWLHTGHL--RGTDGTRRL 473
G Q+D+H+GGIDL FPHH+NE AQS A+ ++ QWVNY+LH GHL +G+ ++ L
Sbjct: 385 LGKQMDIHSGGIDLAFPHHDNELAQSEAYWHKGCSHDQWVNYFLHMGHLSIQGSKMSKSL 444
Query: 474 R 474
+
Sbjct: 445 K 445
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 120/305 (39%), Gaps = 64/305 (20%)
Query: 2 SILSQSSLALSYATSCESPKWSLPSGYDTG------IKIYNPITKTKVPFIIQNK--NHL 53
++L S+ + A + E P W PS +K++N +T++KVPF+ + N +
Sbjct: 24 ALLRSFSIFPAMAAAREQPPWKQPSPSPESASKLPPLKLWNSLTRSKVPFVPLDPTGNKV 83
Query: 54 KWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK 113
WYACGPTVYD H+GHA + I R +H F + ++S IDD ++ S
Sbjct: 84 TWYACGPTVYDDAHLGHARNYI---ITRARQQHLFMEY---VTSHPTIDDSVVETITSAY 137
Query: 114 EDYKTVAKRYFLPLIFK-----------------ILHQKVVGSIPTRGHAVCNVKLDIIR 156
E Y R LPL+ +L+ +G G A +K+
Sbjct: 138 ESY----VRKNLPLLEHVPIPKAFPEAVEIKYGFVLNGGALGGTGKPGDAEAKIKM---- 189
Query: 157 RILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRL-------------- 202
HI + S+ + D I + L E + +A+ L
Sbjct: 190 -------HIRT-ATSAAKALSDIISDPNAMLSETFYDLAQDVVLPYLDNLKGPSIRGEDY 241
Query: 203 -IFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDG 261
IF L Q+ + D + + +T+ EF E+++ QI + DG
Sbjct: 242 SIFTKLSQRFEDRFMEDARALNILDADEVTRVTEFIPEIVSFVEQIVQHGF--AYATADG 299
Query: 262 KVFSD 266
V+ D
Sbjct: 300 SVYFD 304
>gi|70605996|ref|YP_254866.1| cysteinyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
gi|449066192|ref|YP_007433274.1| cysteinyl-tRNA synthetase [Sulfolobus acidocaldarius N8]
gi|449068468|ref|YP_007435549.1| cysteinyl-tRNA synthetase [Sulfolobus acidocaldarius Ron12/I]
gi|76363434|sp|Q4JCA6.1|SYC_SULAC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|68566644|gb|AAY79573.1| cysteinyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
gi|449034700|gb|AGE70126.1| cysteinyl-tRNA synthetase [Sulfolobus acidocaldarius N8]
gi|449036976|gb|AGE72401.1| cysteinyl-tRNA synthetase [Sulfolobus acidocaldarius Ron12/I]
Length = 469
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 109/170 (64%), Gaps = 11/170 (6%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y +Y ES++ V + RV+ I I F+Q L+D AYI S SVYFDVDSFP
Sbjct: 94 YTKDYMESLKALKV-EIDQHPRVTSHIQEIIDFVQKLVDKGHAYITSSGSVYFDVDSFPS 152
Query: 362 YFKL-------WGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
Y L W + E I + K++P+DFALWK+ KPGEP++ES WGKGRPGWHIECS
Sbjct: 153 YGLLSGSKKEEWNQGEEIVKE--KKNPYDFALWKAWKPGEPYWESPWGKGRPGWHIECST 210
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
M++ + G Q D+H GG+DL FPHHENE AQS + + WV YW+H +L
Sbjct: 211 MSTRYLGEQFDIHGGGVDLVFPHHENERAQSESLLGKI-WVKYWVHVAYL 259
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILE-HYFHI 90
+++YN + + F + +K Y CGPTVYD HIGH V D I R L+ F++
Sbjct: 4 LRLYNTLGRRIETFESFDPLTVKMYVCGPTVYDYVHIGHGRAFVGFDGIVRYLKLRGFNV 63
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I + ++TDIDDKII +AN +D++ + Y
Sbjct: 64 --IRVQNITDIDDKIIKRANETGKDWREIVDYY 94
>gi|389629400|ref|XP_003712353.1| cysteinyl-tRNA synthetase [Magnaporthe oryzae 70-15]
gi|351644685|gb|EHA52546.1| cysteinyl-tRNA synthetase [Magnaporthe oryzae 70-15]
Length = 841
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 130/365 (35%), Positives = 170/365 (46%), Gaps = 53/365 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRI HYF + ++TDIDDKII +A + E K
Sbjct: 82 GHARNYVSTDIIRRIFLHYFDYKVKFVMNITDIDDKIIIRARRQRLLDLEKKKAYTPEEL 141
Query: 200 LRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKC------- 252
L K L + ++ +D + D+ +LA G D K
Sbjct: 142 HALGAKAFLAYAQSNLPLLVEAEALDEKNYEQRRDKAYGGVLAGGALTADGKPGDGEAKI 201
Query: 253 --------EATWQFKDGKVFSDRVFISLP----LYLILIQVSLLGPLTLRTVVFEFLFNF 300
A ++GKVF + LP LY I S T T
Sbjct: 202 KMHLSNMDAAAKGLRNGKVFGSADEVLLPYLDSLYKETIDTSDQSMFTDLTR-------- 253
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R E ++F+ M+ L P TRV+E++P I F+ ++ AY S+ SVYFD+ +F
Sbjct: 254 RMEADFFDDMDNLNNLRPDEITRVTEYVPQIADFVDRIVKKGFAY-ESEGSVYFDIAAFE 312
Query: 361 H------YFKLWGRNENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWGKG 404
K R + Q KRSP DFALWK +KPGEP++ S WG G
Sbjct: 313 KGGNTYARLKPESRGDKALQEEGEGSLSKGAGGKRSPGDFALWKQSKPGEPYWPSPWGNG 372
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFH-----NQSQWVNYWL 459
RPGWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A++ + WV Y+L
Sbjct: 373 RPGWHIECSVMASDRLGAQMDVHSGGIDLAFPHHDNELAQSEAYYCEHGKGEHTWVKYFL 432
Query: 460 HTGHL 464
H GHL
Sbjct: 433 HMGHL 437
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Query: 5 SQSSLALSYATSCESPKWSLPSGYDTGIKIYNPITKTK-VPFIIQNKNHLKWYACGPTVY 63
S+SSLA YA P +LP+ IK++N + VPF + K ++ WYACGPTVY
Sbjct: 23 SRSSLA--YAV----PAAALPTMASPTIKVHNSLQPGGPVPFEPKEKGNVSWYACGPTVY 76
Query: 64 DSPHIGHAVCNVKLDIIRRILEHYF 88
D H+GHA V DIIRRI HYF
Sbjct: 77 DQSHLGHARNYVSTDIIRRIFLHYF 101
>gi|359475690|ref|XP_003631732.1| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
gi|296087508|emb|CBI34097.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 117/203 (57%), Gaps = 18/203 (8%)
Query: 285 GPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQA 344
PLTL + R+ EY + M L PT+ RVS+ + I+ I +++ A
Sbjct: 89 NPLTLSS---------RFCQEYLDDMTDLQCLTPTQQPRVSDHMDQIKDMITQIINNDCA 139
Query: 345 YIGSDHSVYFDVDSFPHYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWY 397
YI D VYF VD P+Y +L GR E + + KR+P DFALWK+AKP EP +
Sbjct: 140 YI-IDGDVYFAVDKSPNYGRLSGRKLEDNRAGERVAVDSRKRNPADFALWKAAKPDEPSW 198
Query: 398 ESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNY 457
+S WG GRPGWHIECSAM++H+ + D+H GGIDL FPHHENE AQSCA +S V+Y
Sbjct: 199 DSPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIFPHHENEIAQSCAACQESN-VSY 257
Query: 458 WLHTGHLRGTDGTRRLRAARFIT 480
W+H GH+ + F T
Sbjct: 258 WMHNGHVTNNNEKMSKSLGNFFT 280
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 30 TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
T +++YN +T+ K F + Y CG T YD H+GHA V D++ R L+H +
Sbjct: 5 TELRVYNTMTQQKEIFKPVVDGKVSMYVCGVTAYDLSHLGHARAAVCFDVLYRYLQHLGY 64
Query: 90 IHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKII +AN L E+ T++ R+
Sbjct: 65 -EVTYVRNFTDVDDKIIRRANELGENPLTLSSRF 97
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 118 TVAKRYFLPLIFKILHQKVVG----SIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSV 173
T K F P++ + V G + GHA V D++ R L+H + + +
Sbjct: 14 TQQKEIFKPVVDGKVSMYVCGVTAYDLSHLGHARAAVCFDVLYRYLQHLGY-EVTYVRNF 72
Query: 174 TDIDDKIINKANSLKEDYKTVAKRY 198
TD+DDKII +AN L E+ T++ R+
Sbjct: 73 TDVDDKIIRRANELGENPLTLSSRF 97
>gi|393905407|gb|EJD73962.1| cysteinyl tRNA synthetase 1, variant [Loa loa]
Length = 651
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 122/204 (59%), Gaps = 26/204 (12%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+YE E+ M VLPPT TRVSE++P I ++++ ++D Y D SVYFD F
Sbjct: 115 KYENEFLYDMACLNVLPPTVLTRVSEYVPEIIAYVEKIIDNGYGYATKDGSVYFDTVKFD 174
Query: 361 H-----YFKL----WGRNENITQHA-------------VKRSPFDFALWKSAKPGEPWYE 398
+ Y KL + NE++ ++ KR+ DFALWK++K GEP++
Sbjct: 175 NTEKHCYCKLVPEAFSDNEHLMKNMRESEGDLSMGNLQSKRNVTDFALWKASKDGEPYWN 234
Query: 399 SAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYW 458
S WGKGRPGWHIECSAM+S G +D+H GG DLKFPHH+NE AQ A+++ WVNY+
Sbjct: 235 SPWGKGRPGWHIECSAMSSKICGSSLDIHAGGFDLKFPHHDNEIAQVEAYYDIENWVNYF 294
Query: 459 LHTGHLR--GTDGTRRLRAARFIT 480
LH G LR G ++ L+ FIT
Sbjct: 295 LHCGSLRIAGLKMSKSLK--NFIT 316
>gi|440465442|gb|ELQ34762.1| cysteinyl-tRNA synthetase [Magnaporthe oryzae Y34]
gi|440487661|gb|ELQ67436.1| cysteinyl-tRNA synthetase [Magnaporthe oryzae P131]
Length = 803
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 130/365 (35%), Positives = 170/365 (46%), Gaps = 53/365 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRI HYF + ++TDIDDKII +A + E K
Sbjct: 44 GHARNYVSTDIIRRIFLHYFDYKVKFVMNITDIDDKIIIRARRQRLLDLEKKKAYTPEEL 103
Query: 200 LRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKC------- 252
L K L + ++ +D + D+ +LA G D K
Sbjct: 104 HALGAKAFLAYAQSNLPLLVEAEALDEKNYEQRRDKAYGGVLAGGALTADGKPGDGEAKI 163
Query: 253 --------EATWQFKDGKVFSDRVFISLP----LYLILIQVSLLGPLTLRTVVFEFLFNF 300
A ++GKVF + LP LY I S T T
Sbjct: 164 KMHLSNMDAAAKGLRNGKVFGSADEVLLPYLDSLYKETIDTSDQSMFTDLTR-------- 215
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R E ++F+ M+ L P TRV+E++P I F+ ++ AY S+ SVYFD+ +F
Sbjct: 216 RMEADFFDDMDNLNNLRPDEITRVTEYVPQIADFVDRIVKKGFAY-ESEGSVYFDIAAFE 274
Query: 361 H------YFKLWGRNENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWGKG 404
K R + Q KRSP DFALWK +KPGEP++ S WG G
Sbjct: 275 KGGNTYARLKPESRGDKALQEEGEGSLSKGAGGKRSPGDFALWKQSKPGEPYWPSPWGNG 334
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFH-----NQSQWVNYWL 459
RPGWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A++ + WV Y+L
Sbjct: 335 RPGWHIECSVMASDRLGAQMDVHSGGIDLAFPHHDNELAQSEAYYCEHGKGEHTWVKYFL 394
Query: 460 HTGHL 464
H GHL
Sbjct: 395 HMGHL 399
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 32 IKIYNPITKTK-VPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
IK++N + VPF + K ++ WYACGPTVYD H+GHA V DIIRRI HYF
Sbjct: 6 IKVHNSLQPGGPVPFEPKEKGNVSWYACGPTVYDQSHLGHARNYVSTDIIRRIFLHYF 63
>gi|337286143|ref|YP_004625616.1| cysteinyl-tRNA synthetase [Thermodesulfatator indicus DSM 15286]
gi|335358971|gb|AEH44652.1| cysteinyl-tRNA synthetase [Thermodesulfatator indicus DSM 15286]
Length = 498
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 106/169 (62%), Gaps = 9/169 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY Y E M+ VL PT + +E IP I + I+TL+ AY+ +D VYF V+ FP
Sbjct: 95 RYIKSYDEDMKALKVLRPTYEPKATEHIPQIIALIETLIKKGFAYV-ADGDVYFSVEKFP 153
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GRN I KR P DFALWK+ KPGEP ++S WG+GRPGWHIECS
Sbjct: 154 EYGKLSGRNLEELKAGARIAVSEKKRHPLDFALWKAEKPGEPSWDSPWGRGRPGWHIECS 213
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AMA ++ G +D+H GG+DL FPHHENE AQS A + +V YWLH G
Sbjct: 214 AMAMYYLGETIDIHGGGLDLIFPHHENEIAQSEAATGKP-FVRYWLHNG 261
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 29 DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
D IK N +T+ K F + + YACG T YD H+GHA V D++ R L+ +
Sbjct: 3 DIEIKFQNTLTRKKEVFEPLSPPRVTMYACGVTAYDESHLGHARAAVVFDVLFRFLK-FL 61
Query: 89 HIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
I + + TDIDDKII +A + K +A+RY
Sbjct: 62 GFEVIYVRNYTDIDDKIIKRAYEVGVSPKELAERYI 97
>gi|343429413|emb|CBQ72986.1| probable cysteinyl-tRNA synthetase [Sporisorium reilianum SRZ2]
Length = 820
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 93/193 (48%), Positives = 115/193 (59%), Gaps = 30/193 (15%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI-GSD---HSVYFDV- 356
+E EYF M++ V PPT TRVSE++P I +F+Q ++D AY G D +V+FD
Sbjct: 269 WEAEYFNDMKRLHVEPPTTLTRVSEYVPEIVTFVQQIIDRGYAYAEGVDADKKNVWFDTR 328
Query: 357 ---------DSFPH-YFKL--WGRNE-------------NITQHAVKRSPFDFALWKSAK 391
SF H Y KL W + + T A KR+ DFALWKS+K
Sbjct: 329 AFDGAKSQDGSFEHSYAKLQPWSKGNRELLEEGEGSLSTSTTATAGKRAASDFALWKSSK 388
Query: 392 PGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQ 451
PGEP + S WG GRPGWHIECS M S G +D+H+GG+DL FPHH+NE AQS A H
Sbjct: 389 PGEPAWPSPWGPGRPGWHIECSVMGSAVLGETMDIHSGGVDLMFPHHDNEIAQSEAHHGC 448
Query: 452 SQWVNYWLHTGHL 464
QWVNY+LHTGHL
Sbjct: 449 RQWVNYFLHTGHL 461
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Query: 20 PKWSLPSGY--DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
P+W LP + +K+YN +T++KVPF+ + + WY CGPTVYD+ H+GHA V
Sbjct: 22 PEWQLPQKQLAEPELKMYNSLTRSKVPFVPKKGRTVTWYNCGPTVYDASHMGHARNYVTQ 81
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
D+IRRIL Y + ++TD+DDKII KA
Sbjct: 82 DVIRRILRDYLGYDVHFVMNITDVDDKIIIKA 113
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 184
GHA V D+IRRIL Y + ++TD+DDKII KA
Sbjct: 73 GHARNYVTQDVIRRILRDYLGYDVHFVMNITDVDDKIIIKA 113
>gi|391342663|ref|XP_003745635.1| PREDICTED: cysteine--tRNA ligase, mitochondrial-like [Metaseiulus
occidentalis]
Length = 527
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 108/166 (65%), Gaps = 3/166 (1%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E +FE ++ V PP+ RV+E +P I FIQ LL++ AY SD +YFD +
Sbjct: 145 FEKSFFEDLKSLQVKPPSIVLRVTENVPLIVDFIQKLLESGCAYQISD-GIYFDTEKDSD 203
Query: 362 YFKLWGRNENITQ--HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHF 419
Y + G + T KR DF LWK AKP EP + + +G GRPGWH+ECSAMAS
Sbjct: 204 YPRFRGGGDAFTSRLQDEKRHFADFVLWKFAKPQEPSWNAPFGAGRPGWHVECSAMASKI 263
Query: 420 FGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
FG VD+H+GG DL+FPHHENEEAQSCA+H+ S W ++LH+GH++
Sbjct: 264 FGSSVDIHSGGKDLEFPHHENEEAQSCAYHSCSNWAKFYLHSGHVQ 309
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 94/164 (57%), Gaps = 6/164 (3%)
Query: 1 CSILSQSSLALSYATSCESPK--WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYAC 58
C I + + +++ A+S SPK W P G+ T +YN I K K P +++ +N +KWYAC
Sbjct: 22 CRIDNLRNCSITGASSAGSPKYLWKAPQGHRTDFSVYNAIAKRKTPLVLERQNVVKWYAC 81
Query: 59 GPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKT 118
GPTVYD HIGHA C V+ D+IRR+LE+ + I ++TDIDDKII ++ +
Sbjct: 82 GPTVYDHSHIGHAFCYVRFDMIRRLLENANN-SVIFAMNITDIDDKIIRRSKETQRSSVD 140
Query: 119 VAKRYFLPLIFKILHQKVVG--SIPTRGHAVCNVKLDIIRRILE 160
+A R F F+ L V SI R + +D I+++LE
Sbjct: 141 IA-REFEKSFFEDLKSLQVKPPSIVLRVTENVPLIVDFIQKLLE 183
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 14/114 (12%)
Query: 116 YKTVAKRYFLPLIFKILHQKVV---GSIPTR------GHAVCNVKLDIIRRILEHYFHIH 166
Y +AKR PL+ + Q VV PT GHA C V+ D+IRR+LE+ +
Sbjct: 58 YNAIAKRK-TPLVLE--RQNVVKWYACGPTVYDHSHIGHAFCYVRFDMIRRLLENANN-S 113
Query: 167 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQKVVRKLAIDLK 220
I ++TDIDDKII ++ + +A R F + F+ L V+ +I L+
Sbjct: 114 VIFAMNITDIDDKIIRRSKETQRSSVDIA-REFEKSFFEDLKSLQVKPPSIVLR 166
>gi|374633905|ref|ZP_09706270.1| cysteinyl-tRNA synthetase [Metallosphaera yellowstonensis MK1]
gi|373523693|gb|EHP68613.1| cysteinyl-tRNA synthetase [Metallosphaera yellowstonensis MK1]
Length = 466
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 111/174 (63%), Gaps = 18/174 (10%)
Query: 301 RYELEYFESMEKFGV---LPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVD 357
+Y Y E ME+ V L P +V+ I HI FIQ L+D AY+ S+ SVYFDVD
Sbjct: 91 KYAKSYLEMMERLKVKIDLHP----KVTTHISHIIDFIQKLIDKGHAYV-SNGSVYFDVD 145
Query: 358 SFPHYFKL-------WGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHI 410
+FP Y +L W + E + KR P+DFALWK+ KPGEP++ES WGKGRPGWHI
Sbjct: 146 TFPQYGELSNIKREEWNQGEEFLKE--KRHPYDFALWKAYKPGEPFWESPWGKGRPGWHI 203
Query: 411 ECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
ECS M++ + G +D+H GG+DL FPHHENE AQ+ A ++WV YW+H L
Sbjct: 204 ECSTMSTRYLGLNIDIHGGGMDLVFPHHENERAQTEALTG-NRWVKYWMHVAFL 256
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I +YN + F + N +K Y CGPTV D HIGH V D I R L +
Sbjct: 2 ITVYNTFGRRVEEFSPYDPNLVKMYVCGPTVQDEVHIGHGRTFVAFDAISRYL-RLSGFN 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY---FLPLIFKI-----LHQKVVGSI 140
I + ++TDIDDKII KA ++ VA +Y +L ++ ++ LH KV I
Sbjct: 61 VIRVQNITDIDDKIIKKAQETGTSWEEVADKYAKSYLEMMERLKVKIDLHPKVTTHI 117
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 47/110 (42%), Gaps = 18/110 (16%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY----- 198
GH V D I R L + I + ++TDIDDKII KA ++ VA +Y
Sbjct: 39 GHGRTFVAFDAISRYL-RLSGFNVIRVQNITDIDDKIIKKAQETGTSWEEVADKYAKSYL 97
Query: 199 --FLRLIFKI-LHQKVVRKLA---------IDLKKAKVDSGPVLTKCDEF 236
RL KI LH KV ++ ID A V +G V D F
Sbjct: 98 EMMERLKVKIDLHPKVTTHISHIIDFIQKLIDKGHAYVSNGSVYFDVDTF 147
>gi|426236909|ref|XP_004012407.1| PREDICTED: cysteine--tRNA ligase, mitochondrial-like [Ovis aries]
Length = 509
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 110/176 (62%), Gaps = 4/176 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E +P I +FI+ L+ AY + +VYFD+ S
Sbjct: 77 YEEDFKQDMAALKVLPPTAYLRVTEHVPQIVTFIERLIANGHAYCTAKGNVYFDLQSRGD 136
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G V KR DFALWK+AKP EP++ S WG GRPGWHIECS +AS
Sbjct: 137 RYGKLVGVAPVPAGEPVDSDKRHASDFALWKAAKPQEPFWGSPWGNGRPGWHIECSTIAS 196
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
FG ++D+H+GG+DL FPHHENE AQ AFH QW NY+LH+GHL G ++
Sbjct: 197 LVFGSRLDIHSGGVDLAFPHHENEIAQCEAFHQCPQWGNYFLHSGHLHVKGGGEKM 252
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 26/131 (19%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKED 115
Y+CGPTVYD H+GHA V+ DIIRRIL F +++ +TD+DDKII +AN +
Sbjct: 10 YSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFGCGVVMVMGITDVDDKIIRRANEMSVS 69
Query: 116 YKTVAKRY---------FLPLIFKILHQKVVGSIP----------TRGHAVCNVKLDIIR 156
++A+ Y L ++ + +V +P GHA C K ++
Sbjct: 70 PASLARLYEEDFKQDMAALKVLPPTAYLRVTEHVPQIVTFIERLIANGHAYCTAKGNV-- 127
Query: 157 RILEHYFHIHS 167
YF + S
Sbjct: 128 -----YFDLQS 133
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F +++ +TD+DDKII +AN + ++A+ Y
Sbjct: 23 GHACSYVRFDIIRRILTRVFGCGVVMVMGITDVDDKIIRRANEMSVSPASLARLY 77
>gi|392576389|gb|EIW69520.1| hypothetical protein TREMEDRAFT_44048 [Tremella mesenterica DSM
1558]
Length = 793
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/184 (48%), Positives = 113/184 (61%), Gaps = 22/184 (11%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV----- 356
+E ++F M + VLPP TRVSE++P I F+Q ++D AY G SV+FDV
Sbjct: 254 WEDKFFSDMSRLHVLPPDTITRVSEYMPEIVDFVQGIVDNGFAYEGG-GSVWFDVTKFEG 312
Query: 357 ---DSFPHYF-----------KLWGRNEN-ITQHAVKRSPFDFALWKS-AKPGEPWYESA 400
D F H + KL E +T KR DFALWK+ +KPGEP + S
Sbjct: 313 ADGDGFRHEYAKLQPGSKGNRKLLDEGEGALTGVQGKRQAADFALWKAKSKPGEPAWPSP 372
Query: 401 WGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLH 460
WG+GRPGWHIECS MAS G +D+H+GG+DL FPHH+NE AQS A+H QWVNY+LH
Sbjct: 373 WGEGRPGWHIECSVMASAILGEGMDIHSGGVDLMFPHHDNEMAQSEAYHGCRQWVNYFLH 432
Query: 461 TGHL 464
TGHL
Sbjct: 433 TGHL 436
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 7 SSLALSYATSCESPKWSLP--SGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYD 64
+++ + ATS P+W P + + +++YN +T+TK F + WY CGPTVYD
Sbjct: 2 TTIDVPKATSFPQPEWKPPQVTIQEPVLRVYNSLTRTKDIFTPTKGRRVDWYNCGPTVYD 61
Query: 65 SPHIGHAVCNVKLDIIRRILEHYF 88
S H+GHA + DIIRRIL YF
Sbjct: 62 SSHMGHARNYLTQDIIRRILRDYF 85
>gi|354494317|ref|XP_003509284.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial
[Cricetulus griseus]
gi|344247739|gb|EGW03843.1| putative cysteinyl-tRNA synthetase, mitochondrial [Cricetulus
griseus]
Length = 549
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 108/170 (63%), Gaps = 10/170 (5%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E E+ + M VLPPT RV+E IP I +FI+ ++ AY + SVYFD+ +
Sbjct: 128 FEEEFKQDMAALKVLPPTVYLRVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLQARGD 187
Query: 362 YFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
+ G+ N+ A KR DFALWK+AKP E ++ S WG GRPGWHIECSA
Sbjct: 188 KY---GKLINVVPSAPVEPADSGKRHASDFALWKAAKPQEVFWTSPWGDGRPGWHIECSA 244
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
MAS FG Q+D+HTGGIDL FPHHENE AQS FH QW NY+LH+GHL
Sbjct: 245 MASEVFGSQLDIHTGGIDLAFPHHENEIAQSEVFHQCQQWGNYFLHSGHL 294
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 65/102 (63%)
Query: 22 WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
W P G DTG++++N +T K P I+ + + WY+CGPTVYD H+GHA V+ DIIR
Sbjct: 27 WQRPQGQDTGVQVHNSLTGRKEPLIVARTDAVSWYSCGPTVYDHAHLGHACSYVRFDIIR 86
Query: 82 RILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
RIL F + ++ S+TD+DDKII +AN + ++A +
Sbjct: 87 RILTKVFGCNVVMAMSITDVDDKIIRRANEMNVSPASLASLF 128
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + ++ S+TD+DDKII +AN + ++A +
Sbjct: 74 GHACSYVRFDIIRRILTKVFGCNVVMAMSITDVDDKIIRRANEMNVSPASLASLF 128
>gi|73989537|ref|XP_534184.2| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial [Canis
lupus familiaris]
Length = 628
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 107/167 (64%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE E+ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 208 YEEEFKQDMAALKVLPPTVYVRVTETIPQIISFIEGIIANGHAYSTAQGNVYFDLQSRGD 267
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G V KR DFALWK+AKP E ++ S WGKGRPGWHIECS ++S
Sbjct: 268 KYGKLVGVVPGPLGEPVDSDKRHASDFALWKAAKPQEVFWASPWGKGRPGWHIECSTISS 327
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GG+DL FPHHENE AQ AFH QW NY+LH+GHL
Sbjct: 328 LVFGSQLDIHSGGVDLAFPHHENEIAQCEAFHQCKQWGNYFLHSGHL 374
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%)
Query: 53 LKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL 112
L Y+CGPTVYD H+GHA V+ DIIRRIL F + I++ +TD+DDKII++A+ +
Sbjct: 138 LLLYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFGYNVIMVMGITDVDDKIIHRASEM 197
Query: 113 KEDYKTVAKRY 123
++A Y
Sbjct: 198 NVSPASLANLY 208
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + I++ +TD+DDKII++A+ + ++A Y
Sbjct: 154 GHACSYVRFDIIRRILTRVFGYNVIMVMGITDVDDKIIHRASEMNVSPASLANLY 208
>gi|169615663|ref|XP_001801247.1| hypothetical protein SNOG_10992 [Phaeosphaeria nodorum SN15]
gi|160703013|gb|EAT81491.2| hypothetical protein SNOG_10992 [Phaeosphaeria nodorum SN15]
Length = 837
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 113/186 (60%), Gaps = 22/186 (11%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+YE + E M VL P TRV+E+ I +F++ ++ AY SD SVYFD+++F
Sbjct: 278 KYEARFNEDMRSLNVLDPNVVTRVTEYGDQIVTFVEKIVANGFAYSTSDGSVYFDIEAFE 337
Query: 361 -----HYFKL--WGRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWG 402
HY +L W R + Q + KRS DFALWKS+KPGEP ++S WG
Sbjct: 338 KVPGNHYARLEPWNRGDKSLQADGEGALSQQKTSEKRSESDFALWKSSKPGEPAWKSPWG 397
Query: 403 KGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS----QWVNYW 458
GRPGWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A + QWVNY+
Sbjct: 398 PGRPGWHIECSVMASDVLGEQMDIHSGGIDLCFPHHDNELAQSEAHWSSKEGGHQWVNYF 457
Query: 459 LHTGHL 464
LH GHL
Sbjct: 458 LHMGHL 463
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 6/124 (4%)
Query: 1 CSILSQSSLALSYATSCES-PKWSLP-SGYDTGIKIYNPITKTKVPFIIQNKNH--LKWY 56
C+ + ++ + ATS + P W P S ++ +K++N +T++K F+ + +KWY
Sbjct: 26 CTNPLRLTIVATMATSTRTQPPWKEPKSSHEAKLKVWNSLTRSKNEFVPVDPEGKVVKWY 85
Query: 57 ACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII--NKANSLKE 114
+CGPTVYD H+GHA V +DI+RR+L YF + + ++TD+DDKII + L
Sbjct: 86 SCGPTVYDDAHLGHARNYVTIDILRRVLAGYFGYNLRFVQNITDVDDKIILRGRQQYLLA 145
Query: 115 DYKT 118
D+K+
Sbjct: 146 DFKS 149
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII--NKANSLKEDYKT 193
GHA V +DI+RR+L YF + + ++TD+DDKII + L D+K+
Sbjct: 98 GHARNYVTIDILRRVLAGYFGYNLRFVQNITDVDDKIILRGRQQYLLADFKS 149
>gi|336466038|gb|EGO54203.1| hypothetical protein NEUTE1DRAFT_87363 [Neurospora tetrasperma FGSC
2508]
gi|350287118|gb|EGZ68365.1| hypothetical protein NEUTE2DRAFT_118160 [Neurospora tetrasperma
FGSC 2509]
Length = 797
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/394 (34%), Positives = 179/394 (45%), Gaps = 73/394 (18%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRIL HYF + II KA + E K
Sbjct: 42 GHARNYVSTDIIRRILMHYFDYKVNFV---------IIIKARRKRLLELEKEKPYTPEQI 92
Query: 200 LRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDE-----LLALGVQIKDQKC-- 252
LIFK Q + L + A D+ P+ K E R + +LA G + + K
Sbjct: 93 HDLIFKAF-QAYTKSLPL---LAPEDAAPLDEKNYEERKQAAYGVVLAGGPLVPETKPGD 148
Query: 253 -------------EATWQFKDGKVFSDRVFISLP----LYLILIQVSLLGPLTLRTVVFE 295
A K+G + LP LY I S T T E
Sbjct: 149 AEAKVKMHLNNMDAAAEALKNGSGLDAAEDVLLPYLDSLYKETIDTSDQTIFTDLTKTME 208
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFD 355
F + ME VLPP TRV+E++P I +F++ ++ AY +D SVYFD
Sbjct: 209 KAFA--------DDMEALNVLPPDVITRVTEYVPQIVAFVEQIIQKGFAY-EADGSVYFD 259
Query: 356 VDSFPHYFKLWGR------NENITQH----------AVKRSPFDFALWKSAKPGEPWYES 399
+ +F + R N+ Q K+ DFALWK +KPGEP++ S
Sbjct: 260 IGAFEKAGNTYARLRPESKNDTALQEEGEGSLSTALGGKKRSGDFALWKKSKPGEPYWPS 319
Query: 400 AWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCA-FHN----QSQW 454
WG GRPGWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A FH+ + W
Sbjct: 320 PWGAGRPGWHIECSVMASDKLGEQMDIHSGGIDLAFPHHDNELAQSEAYFHDCCKGEHTW 379
Query: 455 VNYWLHTGHLR--GTDGTRRLRAARFITNLSGST 486
V Y+LH GHL G+ ++ L+ + I + ST
Sbjct: 380 VKYFLHMGHLSIAGSKMSKSLKNFQTIQDALAST 413
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 33/46 (71%)
Query: 43 VPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
VPF+ + + + WYACGPTVYD H+GHA V DIIRRIL HYF
Sbjct: 16 VPFVPKEEGAISWYACGPTVYDLSHLGHARNYVSTDIIRRILMHYF 61
>gi|168027561|ref|XP_001766298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682512|gb|EDQ68930.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 736
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 172/353 (48%), Gaps = 60/353 (16%)
Query: 160 EHYFHIHSIVISSVTDIDDKIINKA--NSLKEDYKTVA----KRYFLRLIFKILHQKVVR 213
+ YFH + ++TD+DDKIIN+A N L + Y++ A K + + L + V
Sbjct: 77 QDYFHYDVKYVMNITDVDDKIINRARRNHLMDQYRSAATDLNKGLMGTQVIEDLERAVEE 136
Query: 214 KLAIDLKKAKVDSGPVLTKCDEFR--DELLALGVQIKDQKCEATWQFKDGKVFSDRVFIS 271
+L KK ++G K R DEL G + C F S
Sbjct: 137 ELGKQQKKIS-ETGEEFAKATLSRQKDELADRG-EPSRSVCH---------------FGS 179
Query: 272 LPLYLILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHI 331
LP I + V YE E+++ M G P RV+E++ I
Sbjct: 180 LPSRCISVLVM-------------------YENEFWDDMSALGCGYPDVLVRVTEYMDKI 220
Query: 332 QSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGR--------------NENITQHAV 377
+++ ++ K AY+ ++ SVYFD +F +G+ +E+ +
Sbjct: 221 VEYVEVIVANKFAYV-ANESVYFDTRAFREAGHRYGKLNPAAVGSSMLASESESNFDTSE 279
Query: 378 KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPH 437
KR+ DFALWK +KPGEP ++S WG GRPGWHIECSAMAS G +D+HTGG DL+FPH
Sbjct: 280 KRTSCDFALWKKSKPGEPSWDSPWGPGRPGWHIECSAMASDILGDSIDIHTGGHDLQFPH 339
Query: 438 HENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAARFITNLSGSTIGYT 490
H+NE AQS A+ + +WV Y+ H+GHL DG + ++ + + + YT
Sbjct: 340 HDNELAQSEAYFHCHEWVRYFFHSGHL-SIDGLKMSKSLKNFITIKTALTMYT 391
>gi|167519473|ref|XP_001744076.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777162|gb|EDQ90779.1| predicted protein [Monosiga brevicollis MX1]
Length = 667
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 112/180 (62%), Gaps = 18/180 (10%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF-- 359
+E E+F+ M V P TRV+ ++P I ++IQ ++D AY S+ SVYFDV F
Sbjct: 168 WEAEFFQDMSALNVEPADVITRVTGYVPQIVAYIQRIIDNGFAY-ESNGSVYFDVTKFRT 226
Query: 360 --PHYF-----------KLWGRNENITQHA--VKRSPFDFALWKSAKPGEPWYESAWGKG 404
H + KL E A KR+ DFALWK++KPGEP + S WG+G
Sbjct: 227 DKDHTYAKLKPEAVGNDKLLSDGEGALSGAGSEKRNQSDFALWKASKPGEPSWTSPWGQG 286
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
RPGWHIECSAMAS G +D+H+GG+DL+FPHH+NE AQS A+ QWVNY+LH+GHL
Sbjct: 287 RPGWHIECSAMASDILGDNMDIHSGGVDLQFPHHDNELAQSEAYFQNDQWVNYFLHSGHL 346
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 30/44 (68%)
Query: 45 FIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
F+ Q + WYACGPTVYD+ H+GHA V DI+RRIL YF
Sbjct: 1 FVPQQGPRVTWYACGPTVYDAAHLGHARSYVSFDILRRILREYF 44
>gi|302508593|ref|XP_003016257.1| hypothetical protein ARB_05655 [Arthroderma benhamiae CBS 112371]
gi|291179826|gb|EFE35612.1| hypothetical protein ARB_05655 [Arthroderma benhamiae CBS 112371]
Length = 1165
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 116/200 (58%), Gaps = 17/200 (8%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP- 360
+E + E M VL P TR + +IP I FI+ ++D AY SD S+YF++D F
Sbjct: 67 FETRFLEDMRFLNVLDPDELTRATSYIPEIIQFIEKIIDNGFAYSTSDGSIYFNIDKFAN 126
Query: 361 ---HYFKL--WGRNENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWGKGR 405
HY KL W R+ Q K S DFALW +++ GEP + WG GR
Sbjct: 127 AGNHYAKLEPWNRHNKHLQRDGEGSLSKNTTAKASKNDFALWNASRAGEPSWPGPWGNGR 186
Query: 406 PGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
PGWHIECSAMAS G Q+D+H+GGIDL FPHH+NE Q A+ ++QWVNY+LH GHL
Sbjct: 187 PGWHIECSAMASATLGSQIDIHSGGIDLAFPHHDNELPQGEAYWGETQWVNYFLHMGHL- 245
Query: 466 GTDGTRRLRAARFITNLSGS 485
G++ ++ + T + G+
Sbjct: 246 SIHGSKMSKSLKNFTAIGGA 265
>gi|395855194|ref|XP_003800055.1| PREDICTED: probable cysteine--tRNA ligase, mitochondrial [Otolemur
garnettii]
Length = 654
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 109/170 (64%), Gaps = 10/170 (5%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E+ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 138 YEEEFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIARGHAYSTAKGNVYFDLKSRGD 197
Query: 362 YFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
+ G+ ++ V KR DFALWK+AKP E ++ S WG GRPGWHIECSA
Sbjct: 198 KY---GKLVSVAPGPVGEPGDSDKRHASDFALWKAAKPEEIFWASPWGHGRPGWHIECSA 254
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
MAS FGGQ+D+H+GGIDL FPHHENE AQ AFH QW NY+LH+GHL
Sbjct: 255 MASMVFGGQLDIHSGGIDLAFPHHENEIAQCEAFHQCRQWGNYFLHSGHL 304
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 19/160 (11%)
Query: 14 ATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
A+ W P+G DTG+++YN +T K P +++ WY+CGPTVYD H+GHA
Sbjct: 29 ASGGRGHAWLRPAGQDTGVQVYNSLTGRKEPLVVERAGTASWYSCGPTVYDHAHLGHACS 88
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY---------F 124
V+ DIIRRIL F + +++ +TD+DDKII +A + ++A+ Y
Sbjct: 89 YVRFDIIRRILTRVFGCNIVMVMGITDVDDKIIQRAREMDLPPVSLARHYEEEFKQDMAA 148
Query: 125 LPLIFKILHQKVVGSIP----------TRGHAVCNVKLDI 154
L ++ ++ +V +IP RGHA K ++
Sbjct: 149 LKVLPPTVYLRVTENIPQIISFIEGIIARGHAYSTAKGNV 188
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + +++ +TD+DDKII +A + ++A+ Y
Sbjct: 84 GHACSYVRFDIIRRILTRVFGCNIVMVMGITDVDDKIIQRAREMDLPPVSLARHY 138
>gi|327268009|ref|XP_003218791.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial-like
[Anolis carolinensis]
Length = 686
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 107/167 (64%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF-P 360
YE ++ + M VLPPT RV+E IP I SFIQ ++ ++ Y S +VYFDV S
Sbjct: 250 YEEDFKQDMAALKVLPPTVYMRVTENIPQIISFIQKIIASRHGYATSKGNVYFDVRSRGE 309
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL + + V K DFALWK+AKP E ++S WGKGRPGWHIECS ++S
Sbjct: 310 RYGKLANIYPDAQEEPVDSDKSHVKDFALWKAAKPQEMCWDSPWGKGRPGWHIECSTISS 369
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FGG +D+HTGGIDL FPHHENE AQ +H QW NY+LH+GHL
Sbjct: 370 LVFGGHLDIHTGGIDLAFPHHENEIAQCEVYHQCDQWANYFLHSGHL 416
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 69/103 (66%)
Query: 21 KWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDII 80
KW P G ++GI+ YN ++K+K P +++N + + WY+CGPTVYD H+GHA V+ DII
Sbjct: 148 KWLQPRGPESGIQTYNSLSKSKEPLVLRNPDVVTWYSCGPTVYDHAHLGHACSYVRFDII 207
Query: 81 RRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
RRI+ F +++ +TDIDDKII +AN + T+A+ Y
Sbjct: 208 RRIMTRLFGKEVVMVMGITDIDDKIIKRANEMGISPLTLARFY 250
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRI+ F +++ +TDIDDKII +AN + T+A+ Y
Sbjct: 196 GHACSYVRFDIIRRIMTRLFGKEVVMVMGITDIDDKIIKRANEMGISPLTLARFY 250
>gi|388853428|emb|CCF52827.1| probable cysteinyl-tRNA synthetase [Ustilago hordei]
Length = 825
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/193 (47%), Positives = 116/193 (60%), Gaps = 30/193 (15%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY---IGSDH-SVYFDV- 356
+E EYF M++ V PPT TRVSE++P I +F+Q ++D AY + +D +V+FD
Sbjct: 273 WEAEYFNDMKRLHVEPPTTLTRVSEYVPEIVAFVQQIVDRGYAYSEGVDADKKNVWFDTR 332
Query: 357 ---------DSFPH-YFKL--WGRNE-------------NITQHAVKRSPFDFALWKSAK 391
SF H Y KL W + + T A KR+ DFALWKS+K
Sbjct: 333 AFDGARSQDGSFEHSYAKLQPWSKGNRELLEEGEGSLSTSTTATAGKRAASDFALWKSSK 392
Query: 392 PGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQ 451
PGEP + S WG GRPGWHIECS M S G +D+H+GG+DL FPHH+NE AQS A H
Sbjct: 393 PGEPAWPSPWGPGRPGWHIECSVMGSAVLGETMDIHSGGVDLMFPHHDNEIAQSEAHHGC 452
Query: 452 SQWVNYWLHTGHL 464
QWVNY+LHTGHL
Sbjct: 453 RQWVNYFLHTGHL 465
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 20 PKWSLPSGY--DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
P+W +P + +K+YN +T+TK PF+ + + WY CGPTVYD+ H+GHA V
Sbjct: 26 PEWHIPQKQVPEPELKVYNSLTRTKTPFVPRKGRTVTWYNCGPTVYDASHMGHARNYVTQ 85
Query: 78 DIIRRILEHY--FHIHSIV 94
DIIRRIL Y + +H ++
Sbjct: 86 DIIRRILRDYLGYDVHFVM 104
>gi|126465424|ref|YP_001040533.1| cysteinyl-tRNA synthetase [Staphylothermus marinus F1]
gi|166225308|sp|A3DLW5.1|SYC_STAMF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|126014247|gb|ABN69625.1| cysteinyl-tRNA synthetase [Staphylothermus marinus F1]
Length = 477
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 107/170 (62%), Gaps = 13/170 (7%)
Query: 302 YELEYFESMEKFGV---LPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS 358
Y +Y ES+ K V L P RV+E I I FIQ L+D AY+ SVYF+VD
Sbjct: 94 YTRDYLESLGKLNVKVDLHP----RVTEHIKEIIEFIQILIDKGYAYVAPSGSVYFEVDK 149
Query: 359 FPHYFKLWGR-NENITQH-----AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
+P Y +L GR N+ + + K+ P+DFALWK+ KPGEP +++ WGKGRPGWHIEC
Sbjct: 150 YPEYGELSGRTNKELWSQEKEFISEKKKPYDFALWKAWKPGEPHWDAPWGKGRPGWHIEC 209
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
S M+S + G Q D+H GG DL FPHHENE AQS A WV YW+HTG
Sbjct: 210 SVMSSRYLGRQFDIHGGGTDLIFPHHENERAQSEAAFGVKPWVKYWVHTG 259
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 15/131 (11%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
GIKIYN +T+ F + +K Y CGPTVYD HIGH V D ++R L +
Sbjct: 3 GIKIYNTLTRKIEEFKPVSPGFVKMYVCGPTVYDYNHIGHGRVYVVYDALKRYLALRGY- 61
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNV 150
H + + ++TDIDDKIIN+A+ K D++ +A+ Y + + +G + NV
Sbjct: 62 HVLHVMNITDIDDKIINRAHQEKRDWREIAETYTRDYL------ESLGKL--------NV 107
Query: 151 KLDIIRRILEH 161
K+D+ R+ EH
Sbjct: 108 KVDLHPRVTEH 118
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GH V D ++R L + H + + ++TDIDDKIIN+A+ K D++ +A+ Y
Sbjct: 41 GHGRVYVVYDALKRYLALRGY-HVLHVMNITDIDDKIINRAHQEKRDWREIAETY 94
>gi|392409460|ref|YP_006446067.1| cysteinyl-tRNA synthetase [Desulfomonile tiedjei DSM 6799]
gi|390622596|gb|AFM23803.1| cysteinyl-tRNA synthetase [Desulfomonile tiedjei DSM 6799]
Length = 480
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 105/165 (63%), Gaps = 9/165 (5%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E++ M+ GVL PTR + +EFI IQ+ I L++ K AY D V F V SFP Y K
Sbjct: 96 EFYVDMDALGVLRPTREPKATEFIAQIQALIAKLVEGKYAYT-VDGDVMFSVASFPEYGK 154
Query: 365 LWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L G+ + + K++P DFALWK+AKPGEP +ES WG GRPGWHIECSAM+
Sbjct: 155 LSGKKVDELMSGARVDVNEKKKNPLDFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSM 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
+ G D+H GG DL FPHHENE AQS A ++ +VNYW+H G
Sbjct: 215 FYLGQHFDIHGGGADLTFPHHENEIAQSEAATGET-FVNYWVHNG 258
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
G+KI+N +T+ K F +N N Y CG TVYD HIGHA V DII R L F
Sbjct: 2 GLKIFNTMTRKKEDFKPRNPNRTGMYVCGVTVYDYCHIGHARSQVLFDIIFRYL--MFKG 59
Query: 91 HSIV-ISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + + + TDIDDKIIN+AN LK D+K +A+++
Sbjct: 60 YEVTYVRNFTDIDDKIINRANELKIDWKELAEKF 93
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 16/109 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIV-ISSVTDIDDKIINKANSLKEDYKTVAKRYFLRL 202
GHA V DII R L F + + + + TDIDDKIIN+AN LK D+K +A
Sbjct: 40 GHARSQVLFDIIFRYL--MFKGYEVTYVRNFTDIDDKIINRANELKIDWKELA------- 90
Query: 203 IFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQK 251
+K VR+ +D+ V K EF ++ AL ++ + K
Sbjct: 91 ------EKFVREFYVDMDALGVLRPTREPKATEFIAQIQALIAKLVEGK 133
>gi|402074654|gb|EJT70163.1| cysteinyl-tRNA synthetase [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 806
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 172/362 (47%), Gaps = 47/362 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYF--HIHSIVISSVTDIDDKIINKANSL-----KEDYKTVAK 196
GHA V D+IRRI HYF ++ ++ + D I + N L K+ Y
Sbjct: 45 GHARNYVSTDVIRRIFMHYFGYKVNFVMNITDIDDKIIIRARRNRLLELEKKKKYDAAGL 104
Query: 197 RYFLRLIFKILHQK----VVRKLAIDLKK---------AKVDSGPVLTKCDEFRDELLAL 243
+ F+ Q +V ++ +D V +G L + D +
Sbjct: 105 KSLGSSAFQAYAQGNLPLLVAEVGLDETNYEKRRDASYGGVLAGRALLGDGKPGDAEAKI 164
Query: 244 GVQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRYE 303
+ + + A +D VF I LP L + ++ T +F L E
Sbjct: 165 KMHLSNMDAAAR-GLRDDAVFGPADEILLPYLDSLYKETID---TSDQSMFTDLTK-HME 219
Query: 304 LEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYF 363
E+F+ M+ L P + TRV+E++P I F+ ++ AY ++ SVYFD+D+F
Sbjct: 220 GEFFDDMDALNNLRPDQITRVTEYVPQIVDFVNQIVKKGFAYE-AEGSVYFDIDAFEKAE 278
Query: 364 KLWGR------NENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPG 407
+ R + Q KRSP DFALWK +KPGEP+++S WG GRPG
Sbjct: 279 NKYARLRPDCRGDKALQEEGEGSLSKGSGGKRSPGDFALWKKSKPGEPYWDSPWGAGRPG 338
Query: 408 WHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF-----HNQSQWVNYWLHTG 462
WHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A+ H Q WV Y+LH G
Sbjct: 339 WHIECSVMASDRLGAQMDIHSGGIDLAFPHHDNELAQSEAYFCEKGHGQHTWVRYFLHMG 398
Query: 463 HL 464
HL
Sbjct: 399 HL 400
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 30 TGIKIYNPIT-KTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
T I+++N + F K ++ WYACGPTVYD H+GHA V D+IRRI HYF
Sbjct: 5 TTIRVHNSLEPGATAAFEPIAKGNVSWYACGPTVYDQSHLGHARNYVSTDVIRRIFMHYF 64
>gi|332796177|ref|YP_004457677.1| cysteinyl-tRNA synthetase [Acidianus hospitalis W1]
gi|332693912|gb|AEE93379.1| cysteinyl-tRNA synthetase [Acidianus hospitalis W1]
Length = 467
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 114/184 (61%), Gaps = 19/184 (10%)
Query: 302 YELEYFESMEKFGV---LPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS 358
Y +Y E++ V L P RV++ I I +F+Q L+D AY+ SVYFDVD+
Sbjct: 92 YSKDYLENLSLLKVKIDLHP----RVTQHIKEIINFVQGLIDKGHAYVAPSGSVYFDVDT 147
Query: 359 FPHYFKL-------WGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIE 411
+PHY +L W + E + KR P+DFALWK+ KPGEP++ES WGKGRPGWHIE
Sbjct: 148 YPHYGELSNTKKDQWNQGEEFVKE--KRHPYDFALWKAWKPGEPYWESPWGKGRPGWHIE 205
Query: 412 CSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDG 469
CS M++ + G Q D+H GG+DL FPHHENE AQ+ + + WV YW+H L RG
Sbjct: 206 CSTMSTRYLGEQFDIHGGGMDLIFPHHENERAQTESLTGKP-WVRYWMHVAFLNIRGEKM 264
Query: 470 TRRL 473
++ L
Sbjct: 265 SKSL 268
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I+++N + + F +K Y CGPTVYD HIGH V D I R L + +
Sbjct: 2 IRVFNTLGRKFEDFSTVENGIVKMYVCGPTVYDYVHIGHGRTFVAYDAIVRYLRLKGY-N 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I I ++TDIDDKIIN+A + ++ + Y
Sbjct: 61 VIRIQNITDIDDKIINRAKETGKSWEEIVDYY 92
>gi|359496172|ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
gi|297735988|emb|CBI23962.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 109/183 (59%), Gaps = 9/183 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
EY + M L PT RVS+ + I+ I +++ AY D VYF VD P+Y +
Sbjct: 100 EYLDDMTDLHCLSPTHQPRVSDHMDQIKDMITQIINNDCAYT-IDGDVYFAVDKSPNYGR 158
Query: 365 LWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L GR E + + KR+P DFALWK+AKPGEP ++S WG GRPGWHIECSAM++
Sbjct: 159 LSGRKLENNRAGERVAVDSRKRNPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSA 218
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAAR 477
H+ + D+H GGIDL FPHHENE AQSCA +S V+YW+H GH+ +
Sbjct: 219 HYLTFKFDIHGGGIDLIFPHHENEIAQSCAACQESN-VSYWMHNGHVTNNNEKMSKSLGN 277
Query: 478 FIT 480
F T
Sbjct: 278 FFT 280
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 30 TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
T +++YN +T+ K + Y CG T YD H+GH V D++ R L+H +
Sbjct: 5 TELRVYNTMTQQKEILKPVVDGKVSMYVCGVTAYDLSHLGHGRAAVSFDVLYRYLQHLGY 64
Query: 90 IHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKII +AN L E+ T++ +
Sbjct: 65 -EVTYVRNFTDVDDKIIRRANELGENPLTLSSHF 97
>gi|408418553|ref|YP_006759967.1| cysteinyl-tRNA synthetase CysS [Desulfobacula toluolica Tol2]
gi|405105766|emb|CCK79263.1| CysS: cysteinyl-tRNA synthetase [Desulfobacula toluolica Tol2]
Length = 487
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 104/169 (61%), Gaps = 8/169 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y E+ M+ VL PT + +E I HI FIQ L+D +AY VYF +DSF
Sbjct: 92 KYIDEFHNEMDALNVLRPTVEPKATEHIRHIIDFIQMLIDKGKAYPVEGGDVYFSIDSFK 151
Query: 361 HYFKLWGRNEN-------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GRN + I K+SP DF+LWK AKPGEP +ES WGKGRPGWHIECS
Sbjct: 152 EYGKLSGRNPDDMRAGARIAVDDKKKSPLDFSLWKPAKPGEPCWESPWGKGRPGWHIECS 211
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM+ + G D+H GG DL FPHHENE AQS A + Q+V YW+H G
Sbjct: 212 AMSYEYLGEGFDIHGGGKDLIFPHHENELAQSEAVFGR-QFVKYWIHNG 259
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN + K F+ N+ +K Y CGPTVYD+ HIGHA V D I R L+
Sbjct: 3 LKVYNTLHGRKEEFVPLNEGKVKMYVCGPTVYDTSHIGHARSVVVFDTILRWLQE-LEYE 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKII K+N E + ++Y
Sbjct: 62 VTYVRNFTDVDDKIIKKSNETGEACSAITEKY 93
>gi|345325150|ref|XP_001514971.2| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial-like
[Ornithorhynchus anatinus]
Length = 604
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 107/167 (64%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ E M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ +
Sbjct: 156 YEEDFKEDMAALKVLPPTVYMRVTENIPQIISFIERIIANGHAYSTNQGNVYFDLKARGD 215
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y L G + + KR P DFALWK+AKP E ++ S WG GRPGWHIECS ++S
Sbjct: 216 KYGTLVGMTSDPREEPADSDKRHPSDFALWKAAKPQEIFWTSPWGNGRPGWHIECSTISS 275
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ +H SQW NY+LH+GHL
Sbjct: 276 LIFGSQLDIHSGGIDLAFPHHENEIAQCEVYHQCSQWGNYFLHSGHL 322
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%)
Query: 55 WYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKE 114
WY+CGPTVYD H+GHA V+ DIIRRIL F I+ + + +TDIDDKII +AN L
Sbjct: 88 WYSCGPTVYDHAHLGHACSYVRFDIIRRILTKIFGINLVTVMGITDIDDKIIKRANELNI 147
Query: 115 DYKTVAKRY 123
+A+ Y
Sbjct: 148 SPIALARLY 156
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F I+ + + +TDIDDKII +AN L +A+ Y
Sbjct: 102 GHACSYVRFDIIRRILTKIFGINLVTVMGITDIDDKIIKRANELNISPIALARLY 156
>gi|15922576|ref|NP_378245.1| cysteinyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
Length = 471
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/149 (53%), Positives = 99/149 (66%), Gaps = 10/149 (6%)
Query: 323 RVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL-------WGRNENITQH 375
RV+ I I +FIQ L+D AY+ SVYFDVDSFP Y L W + E +
Sbjct: 116 RVTYHIKEIINFIQKLIDKGHAYVAKSGSVYFDVDSFPSYGLLSGTKKEEWNQGEEFVKE 175
Query: 376 AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKF 435
K++P+DFALWK+ KPGEP++ES WGKGRPGWHIECS M+ + G + D+H GGIDL F
Sbjct: 176 --KKNPYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSMRYLGEEFDIHGGGIDLIF 233
Query: 436 PHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
PHHENE AQS A + QWV YW+H +L
Sbjct: 234 PHHENERAQSEALLGK-QWVKYWVHVSYL 261
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I+IYN + + P +K Y CGPTVYD HIGH V D + R L + +
Sbjct: 6 IRIYNTLGRKIQPLETVEPQTVKMYVCGPTVYDYLHIGHGRTFVSFDAMVRYLRLRGY-N 64
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I + ++TDIDDKII KA +D+ + Y
Sbjct: 65 VIRVQNITDIDDKIIKKAQETGKDWTEIVDFY 96
>gi|347524097|ref|YP_004781667.1| cysteinyl-tRNA synthetase [Pyrolobus fumarii 1A]
gi|343460979|gb|AEM39415.1| cysteinyl-tRNA synthetase [Pyrolobus fumarii 1A]
Length = 481
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 113/186 (60%), Gaps = 19/186 (10%)
Query: 301 RYELEYFESMEKFGV---LPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVD 357
RY +Y E +EK + L P RV+ I I FIQ L++ AY+ SVYFDV
Sbjct: 97 RYTRDYMEMLEKLKINVDLHP----RVTHHIKEIIEFIQVLIEKGHAYVSPSGSVYFDVT 152
Query: 358 SFPHYFKL--------WGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWH 409
++P Y +L W + E + K+ PFDFALWK+ KPGEP ++S WGKGRPGWH
Sbjct: 153 TYPEYGELSGHKSPEAWRQEEEHLRE--KKHPFDFALWKACKPGEPCWDSPWGKGRPGWH 210
Query: 410 IECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGT 467
IECS M+S + G Q ++H GG DL FPHHENE AQS A + WV YWLHTG+L RG
Sbjct: 211 IECSVMSSKYLGDQFEIHGGGQDLIFPHHENERAQSEARFGKRPWVKYWLHTGYLTVRGE 270
Query: 468 DGTRRL 473
++ L
Sbjct: 271 KMSKSL 276
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRI--LEHYFH 89
IK+ N + + F ++ Y CGPTVYD H+GHA V D I+R L Y
Sbjct: 8 IKVLNTLGRRLEDFEPFKPGLVRMYVCGPTVYDYTHLGHARTYVAFDAIKRYLRLRGYNV 67
Query: 90 IHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
IH + ++TDIDDKIIN+A D++ + +RY
Sbjct: 68 IH---VQNITDIDDKIINRAREEGVDWREIVERY 98
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 144 GHAVCNVKLDIIRRILE--HYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V D I+R L Y IH + ++TDIDDKIIN+A D++ + +RY
Sbjct: 45 GHARTYVAFDAIKRYLRLRGYNVIH---VQNITDIDDKIINRAREEGVDWREIVERY 98
>gi|363548476|sp|Q96YC3.2|SYC_SULTO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|342306679|dbj|BAK54768.1| cysteinyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
Length = 468
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/149 (53%), Positives = 99/149 (66%), Gaps = 10/149 (6%)
Query: 323 RVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL-------WGRNENITQH 375
RV+ I I +FIQ L+D AY+ SVYFDVDSFP Y L W + E +
Sbjct: 113 RVTYHIKEIINFIQKLIDKGHAYVAKSGSVYFDVDSFPSYGLLSGTKKEEWNQGEEFVKE 172
Query: 376 AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKF 435
K++P+DFALWK+ KPGEP++ES WGKGRPGWHIECS M+ + G + D+H GGIDL F
Sbjct: 173 --KKNPYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSMRYLGEEFDIHGGGIDLIF 230
Query: 436 PHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
PHHENE AQS A + QWV YW+H +L
Sbjct: 231 PHHENERAQSEALLGK-QWVKYWVHVSYL 258
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I+IYN + + P +K Y CGPTVYD HIGH V D + R L + +
Sbjct: 3 IRIYNTLGRKIQPLETVEPQTVKMYVCGPTVYDYLHIGHGRTFVSFDAMVRYLRLRGY-N 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I + ++TDIDDKII KA +D+ + Y
Sbjct: 62 VIRVQNITDIDDKIIKKAQETGKDWTEIVDFY 93
>gi|168067577|ref|XP_001785689.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662678|gb|EDQ49502.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 491
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 103/169 (60%), Gaps = 8/169 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E+ ME LPP RVS+ IP I I +++ K Y+ VYF+VD+ P
Sbjct: 84 RFCDEFQVDMELLRCLPPNVEPRVSDHIPQIIKMISQIIENKNGYVMEGGDVYFEVDTLP 143
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L GR E + KR+P DFALWKSAKPGEP ++S WG GRPGWHIECS
Sbjct: 144 TYGCLSGRKQEENRAGERVLVDNRKRNPADFALWKSAKPGEPAWDSPWGPGRPGWHIECS 203
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM++ G + D+H GG+DL FPHHENE AQSCA S+ V YWLH G
Sbjct: 204 AMSAEHLGHKFDIHGGGMDLIFPHHENEIAQSCAACADSR-VGYWLHNG 251
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 33 KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHS 92
+++ PI KV Y CG T YD HIGHA V D++ R L+ +
Sbjct: 6 EVFQPIVPGKVSM----------YVCGVTTYDYSHIGHARVYVAFDVLFRYLKSVGY-DV 54
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TDIDDKII +AN + ED +++R+
Sbjct: 55 TYVRNFTDIDDKIIKRANEVGEDPLNLSRRF 85
>gi|335297132|ref|XP_003131142.2| PREDICTED: cysteinyl-tRNA synthetase, mitochondrial-like [Sus
scrofa]
Length = 598
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 124/205 (60%), Gaps = 12/205 (5%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E IP I +FI ++ + AY + +VYFD+ S
Sbjct: 137 YEEDFKQDMAALKVLPPTVYMRVTENIPQIVAFIAGIIASGHAYSTARGNVYFDLQSRGA 196
Query: 361 HYFKLWGRNENITQH---AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G + + KR DFALWK+AKP EP++ S WG GRPGWHIECS ++S
Sbjct: 197 KYGKLVGVVPDPMGEPGDSDKRHAGDFALWKAAKPQEPFWASPWGNGRPGWHIECSTLSS 256
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAAR 477
FG ++D+H+GGIDL FPHHENE AQ AFH QW NY+LH+GHL G ++ ++
Sbjct: 257 LVFGSRLDIHSGGIDLAFPHHENEIAQCEAFHRCPQWGNYFLHSGHLHVEGGEEKM--SK 314
Query: 478 FITNLSGSTIGYTRDTCAGRTGPRC 502
+ N TI TR + A PRC
Sbjct: 315 SLRNY--VTIKVTRSSRA----PRC 333
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 70/110 (63%)
Query: 14 ATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
A+ +W P+GYDTG+K+YN +T+ K P I+ + + WY+CGPTVYD H+GHA
Sbjct: 28 ASGARGQEWLQPAGYDTGVKVYNSLTRRKDPLIVSSADAASWYSCGPTVYDHAHLGHACS 87
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
V+ DIIRRIL F +++ VTD+DDKII +AN L ++A Y
Sbjct: 88 YVRFDIIRRILTRVFGCSVVMVMGVTDVDDKIIKRANELNVSPASLANLY 137
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F +++ VTD+DDKII +AN L ++A Y
Sbjct: 83 GHACSYVRFDIIRRILTRVFGCSVVMVMGVTDVDDKIIKRANELNVSPASLANLY 137
>gi|149057587|gb|EDM08830.1| rCG43187, isoform CRA_d [Rattus norvegicus]
Length = 241
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 108/172 (62%), Gaps = 6/172 (3%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
+E E+ + M VLPPT RV+E IP I SFIQ ++ AY + SVYFD+ +
Sbjct: 30 FEEEFKQDMAALKVLPPTVYLRVTENIPQIISFIQGIIAHGHAYATATGSVYFDLRARGD 89
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL + T V KR DFALWK AKP E ++ S WG GRPGWHIECSAMAS
Sbjct: 90 KYGKLVNTVPSATAEPVDSDKRHSSDFALWKGAKPQEVFWASPWGDGRPGWHIECSAMAS 149
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGH--LRGT 467
FG Q+D+HTGGIDL FPHHENE AQS FH QW NY+LH+G LR T
Sbjct: 150 EVFGSQLDIHTGGIDLAFPHHENEIAQSEVFHQCQQWGNYFLHSGEPDLRQT 201
>gi|414873768|tpg|DAA52325.1| TPA: chloroplast protein synthesis1 [Zea mays]
Length = 564
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 109/175 (62%), Gaps = 11/175 (6%)
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI-GSDHSVYF 354
F + R+ ++ M LPP+ RVS+ + I + I+ +LD + AY+ G D VYF
Sbjct: 151 FSLSKRFSDDFLSDMANLQCLPPSVEPRVSDHVDEIINMIKQILDNRCAYVVGGD--VYF 208
Query: 355 DVDSFPHYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPG 407
VD+FP Y +L GR E + KR+P DFALWK+AK GEPW++S WG GRPG
Sbjct: 209 SVDNFPEYGELSGRKLDDNRAGERVAVDERKRNPADFALWKAAKDGEPWWDSPWGPGRPG 268
Query: 408 WHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
WHIECSAM++H+ G D+H GG DL FPHHENE AQS A S +NYW+H G
Sbjct: 269 WHIECSAMSAHYLGHSFDIHGGGEDLIFPHHENEIAQSRAACCDST-INYWIHNG 322
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 8/163 (4%)
Query: 1 CSILSQSSLALSYATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQ-NKNHLKWYACG 59
C +LSQ + S + S + + +++YN ++ K F + + Y CG
Sbjct: 40 CRLLSQQTKPFSASASNGAA-----TDRTRELRLYNTKSRKKEQFRPRIPGREVGMYVCG 94
Query: 60 PTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTV 119
T YD HIGHA V D++ R L Y + + TDIDDKII +AN L ED ++
Sbjct: 95 VTPYDDSHIGHARAYVAFDVLYRYL-RYLDYEVRYVRNFTDIDDKIIARANQLGEDPFSL 153
Query: 120 AKRYFLPLIFKILH-QKVVGSIPTRGHAVCNVKLDIIRRILEH 161
+KR+ + + + Q + S+ R + +++I++IL++
Sbjct: 154 SKRFSDDFLSDMANLQCLPPSVEPRVSDHVDEIINMIKQILDN 196
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 14/109 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V D++ R L Y + + TDIDDKII +AN L ED +++KR+ +
Sbjct: 104 GHARAYVAFDVLYRYL-RYLDYEVRYVRNFTDIDDKIIARANQLGEDPFSLSKRFSDDFL 162
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKC 252
D+ + V + + DE++ + QI D +C
Sbjct: 163 S-------------DMANLQCLPPSVEPRVSDHVDEIINMIKQILDNRC 198
>gi|13877761|gb|AAK43958.1|AF370143_1 putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|15293251|gb|AAK93736.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|20197327|gb|AAM15026.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|20197896|gb|AAD20662.2| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 493
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 106/169 (62%), Gaps = 9/169 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E+ ME+ L P+ RVS+ IP I I+ +LD AY D +YF VD FP
Sbjct: 84 RFCEEFNRDMEQLQCLDPSVQPRVSDHIPQIIDLIKQILDNGYAY-KVDGDIYFSVDKFP 142
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR E + K+ P DFALWK+AK GEP++ES WG+GRPGWHIECS
Sbjct: 143 TYGKLSGRKLEDNRAGERVAVDTRKKHPADFALWKAAKEGEPFWESPWGRGRPGWHIECS 202
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM++ + G D+H GG+DL FPHHENE AQSCA + S ++YW+H G
Sbjct: 203 AMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACDSSN-ISYWIHNG 250
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 38 ITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISS 97
+++ K F + + + Y CG T YD HIGHA V D++ R L+H + S V +
Sbjct: 1 MSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGYEVSYV-RN 59
Query: 98 VTDIDDKIINKANSLKEDYKTVAKRY 123
TD+DDKII +A L+ED ++++R+
Sbjct: 60 FTDVDDKIIARAKELEEDPISLSRRF 85
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V D++ R L+H + S V + TD+DDKII +A L+ED ++++R+
Sbjct: 32 GHARVYVTFDVLLRYLKHLGYEVSYV-RNFTDVDDKIIARAKELEEDPISLSRRF 85
>gi|348583591|ref|XP_003477556.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial-like
[Cavia porcellus]
Length = 554
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 107/167 (64%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT A RV+E IP I +FIQ ++ AY ++ +VYFD+ S
Sbjct: 134 YEEDFRQDMAALKVLPPTVALRVTETIPQILAFIQGIVARGHAYATAEGNVYFDLRSRGD 193
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL AV KR DFALWK+AKPGE + S WG GRPGWHIECS +AS
Sbjct: 194 KYGKLVDVTPCPAAEAVDSDKRYSGDFALWKAAKPGEVSWASPWGLGRPGWHIECSTIAS 253
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG +D+H+GG+DL FPHHENE AQ FH +QW NY+LH+GHL
Sbjct: 254 TVFGSHLDVHSGGMDLAFPHHENEIAQCEVFHQCAQWGNYFLHSGHL 300
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 69/114 (60%)
Query: 10 ALSYATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIG 69
L A+S W P+G DTG++++N +T K P ++ + + WY+CGPTVYD H+G
Sbjct: 21 GLRAASSGRGLGWRRPAGCDTGVRVHNSLTGRKDPLVVARADAVSWYSCGPTVYDHAHLG 80
Query: 70 HAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
HA V+ DIIRR+L F +++ +TD+DDKII +A+ + +A+ Y
Sbjct: 81 HACSYVRFDIIRRLLTRVFGCSVVMVMGITDVDDKIIRRASEMDMSPAALARLY 134
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRR+L F +++ +TD+DDKII +A+ + +A+ Y
Sbjct: 80 GHACSYVRFDIIRRLLTRVFGCSVVMVMGITDVDDKIIRRASEMDMSPAALARLY 134
>gi|253995884|ref|YP_003047948.1| cysteinyl-tRNA synthetase [Methylotenera mobilis JLW8]
gi|253982563|gb|ACT47421.1| cysteinyl-tRNA synthetase [Methylotenera mobilis JLW8]
Length = 466
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 107/184 (58%), Gaps = 11/184 (5%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E K GVL P + +EF+ + S I L+D AY ++ V++ V SF Y KL G
Sbjct: 98 EDSAKLGVLRPDLEPKATEFVDGMLSMIAALIDKGFAYPAANGDVFYSVSSFQGYGKLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + + K+ P DF LWK+AKPGEP +ES WGKGRPGWHIECSAM+SH
Sbjct: 158 KSLEDLRAGERVEVDSFKKDPMDFVLWKAAKPGEPSWESPWGKGRPGWHIECSAMSSHHL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS----QWVNYWLHTGHLRGTDGTRRLRAA 476
G D+H GG DL+FPHHENE AQS A H+ Q VNYW+H G +R D
Sbjct: 218 GQHFDIHGGGQDLQFPHHENEIAQSEAAHSHDGKPCQMVNYWMHNGFVRVDDEKMSKSLG 277
Query: 477 RFIT 480
F T
Sbjct: 278 NFFT 281
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN + + K F + Y CG TVYD H+GHA V D++ R L + +
Sbjct: 2 LKIYNTLAREKQTFTPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVSRWLRASGY-N 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ +VTDIDDKII +AN E + +R+
Sbjct: 61 VTYVRNVTDIDDKIIKRANENNETIAQLTQRF 92
>gi|449464950|ref|XP_004150192.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
gi|449508099|ref|XP_004163218.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 562
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 111/192 (57%), Gaps = 9/192 (4%)
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFD 355
F + R+ EY M L PT RVS+ + I+ I ++ Y D V+F
Sbjct: 90 FALSDRFCQEYLSDMADLQCLSPTHQPRVSDHLEQIKDMITQIIKNGYGY-AVDGDVFFS 148
Query: 356 VDSFPHYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGW 408
VD FP+Y +L G+ E + + K +P DFALWK+AKPGEP +ES WG GRPGW
Sbjct: 149 VDKFPNYGQLSGQKLENHRAGERVAVDSRKNNPADFALWKAAKPGEPSWESPWGPGRPGW 208
Query: 409 HIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTD 468
HIECSAM++H+ + D+H GGIDL FPHHENE AQSCA +S+ ++YW+H GH+ +
Sbjct: 209 HIECSAMSAHYLTFKFDIHGGGIDLIFPHHENEVAQSCAACQESK-ISYWMHNGHVTNNN 267
Query: 469 GTRRLRAARFIT 480
F T
Sbjct: 268 EKMSKSLGNFFT 279
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 33 KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHS 92
++YN +T+ K F + + Y CG T YD HIGHA V D++ R L+H +
Sbjct: 7 RVYNSMTQQKEVFTTKEPGKVGMYVCGITAYDFSHIGHARAAVNFDVLYRYLKHLGY-EV 65
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKII +AN E+ ++ R+
Sbjct: 66 TYVRNFTDVDDKIIRRANESGENPFALSDRF 96
>gi|212723404|ref|NP_001131561.1| uncharacterized protein LOC100192902 [Zea mays]
gi|194691858|gb|ACF80013.1| unknown [Zea mays]
gi|414590163|tpg|DAA40734.1| TPA: hypothetical protein ZEAMMB73_139992 [Zea mays]
Length = 573
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 109/175 (62%), Gaps = 11/175 (6%)
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI-GSDHSVYF 354
F + R+ ++ M LPP+ RVS+ I I + I+ +LD AY+ G D VYF
Sbjct: 161 FNLSKRFSDDFLLDMANLQCLPPSVEPRVSDHIDEIINMIKQILDNSCAYVVGGD--VYF 218
Query: 355 DVDSFPHYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPG 407
VDSFP Y +L GR E ++ KR+P DFALWK+AK GEPW++S WG GRPG
Sbjct: 219 SVDSFPDYGELSGRKLDDNRAGERVSVDERKRNPADFALWKAAKDGEPWWDSPWGPGRPG 278
Query: 408 WHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
WHIECSAM++H+ G D+H GG DL FPHHENE AQS A S +NYW+H G
Sbjct: 279 WHIECSAMSAHYLGHSFDIHGGGEDLIFPHHENEIAQSRAACCDST-INYWIHNG 332
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKN-HLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+ +YN ++ K F ++ + Y CG T YD HIGHA V D++ R L Y
Sbjct: 76 LHLYNTKSRKKEQFRPRDPGGEVGMYVCGITPYDDSHIGHARAYVAFDVVYRYL-RYLDY 134
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILH-QKVVGSIPTRGHAVCN 149
+ + TDIDDKII +AN L ED ++KR+ + + + Q + S+ R +
Sbjct: 135 EVRYVRNFTDIDDKIIARANQLGEDPFNLSKRFSDDFLLDMANLQCLPPSVEPRVSDHID 194
Query: 150 VKLDIIRRILEH 161
+++I++IL++
Sbjct: 195 EIINMIKQILDN 206
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V D++ R L Y + + TDIDDKII +AN L ED ++KR+ +
Sbjct: 114 GHARAYVAFDVVYRYL-RYLDYEVRYVRNFTDIDDKIIARANQLGEDPFNLSKRFSDDFL 172
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKC 252
+D+ + V + + DE++ + QI D C
Sbjct: 173 -------------LDMANLQCLPPSVEPRVSDHIDEIINMIKQILDNSC 208
>gi|42569504|ref|NP_565717.2| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|330253408|gb|AEC08502.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 563
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 106/169 (62%), Gaps = 9/169 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E+ ME+ L P+ RVS+ IP I I+ +LD AY D +YF VD FP
Sbjct: 154 RFCEEFNRDMEQLQCLDPSVQPRVSDHIPQIIDLIKQILDNGYAY-KVDGDIYFSVDKFP 212
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR E + K+ P DFALWK+AK GEP++ES WG+GRPGWHIECS
Sbjct: 213 TYGKLSGRKLEDNRAGERVAVDTRKKHPADFALWKAAKEGEPFWESPWGRGRPGWHIECS 272
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM++ + G D+H GG+DL FPHHENE AQSCA + S ++YW+H G
Sbjct: 273 AMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACDSSN-ISYWIHNG 320
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
++N +++ K F + + + Y CG T YD HIGHA V D++ R L+H + S
Sbjct: 67 LHNTMSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGYEVSY 126
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRY 123
V + TD+DDKII +A L+ED ++++R+
Sbjct: 127 V-RNFTDVDDKIIARAKELEEDPISLSRRF 155
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V D++ R L+H + S V + TD+DDKII +A L+ED ++++R+
Sbjct: 102 GHARVYVTFDVLLRYLKHLGYEVSYV-RNFTDVDDKIIARAKELEEDPISLSRRF 155
>gi|443894503|dbj|GAC71851.1| cysteinyl-trna synthetase [Pseudozyma antarctica T-34]
Length = 871
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 113/193 (58%), Gaps = 30/193 (15%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI----GSDHSVYFDV- 356
+E ++F M++ V PPT TRVSE++P I +F+Q ++D AY +V+FD
Sbjct: 320 WETQFFNDMKRLHVEPPTTLTRVSEYVPEIVTFVQQIIDRGYAYAEGLDADKKNVWFDTR 379
Query: 357 ---------DSFPH-YFKL--WGRNE-------------NITQHAVKRSPFDFALWKSAK 391
SF H Y KL W + + T A KR+ DFALWKS+K
Sbjct: 380 AFDGAKSSDGSFDHSYAKLQPWSKGNRELLEEGEGSLSTSTTATAGKRAASDFALWKSSK 439
Query: 392 PGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQ 451
PGEP + S WG GRPGWHIECS M S G +D+H+GG+DL FPHH+NE AQS A H
Sbjct: 440 PGEPAWPSPWGPGRPGWHIECSVMGSAVLGETMDIHSGGVDLMFPHHDNEIAQSEAHHGC 499
Query: 452 SQWVNYWLHTGHL 464
QWVNY+LHTGHL
Sbjct: 500 RQWVNYFLHTGHL 512
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 5 SQSSLALSYATSCESPKWSLPSGY--DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTV 62
+Q + S P+W +P + +K+YN +T++KVPF+ + + WY CGPTV
Sbjct: 58 AQPESSSSAGAKISQPEWQIPQKQVPEPELKMYNSLTRSKVPFVPKKGRTVTWYNCGPTV 117
Query: 63 YDSPHIGHAVCNVKLDIIRRILEHY--FHIHSIV 94
YD+ H+GHA V DIIRRIL Y + +H ++
Sbjct: 118 YDASHMGHARNYVTQDIIRRILRDYLGYDVHFVM 151
>gi|340519082|gb|EGR49321.1| hypothetical protein TRIREDRAFT_60250 [Trichoderma reesei QM6a]
Length = 799
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 130/367 (35%), Positives = 173/367 (47%), Gaps = 56/367 (15%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRIL YF + ++TDIDDKII KA + E K+ K
Sbjct: 42 GHARNYVSTDIIRRILRDYFGFKLNFVMNITDIDDKIIIKARRQRLLEIEKSKSYTKEEL 101
Query: 200 LRLIFKILHQKVVRKLAI-----------------DLKKAKVDSGPVLTKCDEFRDELLA 242
++L L + D KV +G LT + D
Sbjct: 102 VKLTRTAFQAYAASSLPLLVEDGNDLDETTYIARRDASYGKVLAGGTLTGEGKPGDAEAK 161
Query: 243 LGVQIKDQKCEATWQFKDGKVF--SDRVFISL--PLYLILIQVSLLGPLTLRTVVFEFLF 298
+ + I + A KDG +F +D +F+ LY I T T E LF
Sbjct: 162 IKMHISNMDAAAE-ALKDGSIFPGADEIFLPYLDSLYKETIDTRDQTMFTDLTKSMEALF 220
Query: 299 NFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS 358
M+ VL P TRV+E++P I F++ +++ AY S+ SVYFD+ +
Sbjct: 221 --------MADMDALNVLRPDHITRVTEYVPQIAKFVERIVEKGFAY-ESEGSVYFDIAA 271
Query: 359 FPHYFKLWGR------NENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWG 402
F + R N+ Q K+ DFALWK +K GEP++ S WG
Sbjct: 272 FEKAGNSYARLRPESKNDKALQEEGEGSLSKNLGGKKGAGDFALWKKSKAGEPFWPSPWG 331
Query: 403 KGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF---HNQSQ--WVNY 457
GRPGWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A+ H + + WVNY
Sbjct: 332 DGRPGWHIECSVMASDILGSQMDIHSGGIDLAFPHHDNELAQSEAYFCEHGKGEHTWVNY 391
Query: 458 WLHTGHL 464
+LH GHL
Sbjct: 392 FLHMGHL 398
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 32 IKIYNPITK-TKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
+K++N + VPF+ + WYACGPTVYD H+GHA V DIIRRIL YF
Sbjct: 4 LKLHNSLKPGAPVPFVPIRPGEVSWYACGPTVYDKSHLGHARNYVSTDIIRRILRDYF 61
>gi|449437168|ref|XP_004136364.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 576
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 107/169 (63%), Gaps = 9/169 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY E+ M LPP+ +VS+ +P I I+ +LD AY D VYF+VD FP
Sbjct: 167 RYCEEFRRDMMYLHCLPPSVEPQVSDHMPQIIDMIKQILDNGYAY-SVDGDVYFNVDKFP 225
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L GR E ++ + K++P DFALWKSAK GEP++ES WG GRPGWHIECS
Sbjct: 226 EYGQLSGRKLEDNRAGERVSVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECS 285
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM++ + G D+H GG+DL FPHHENE AQSCA S V+YW+H G
Sbjct: 286 AMSASYLGYSFDIHGGGMDLVFPHHENEIAQSCAACRTSN-VSYWVHNG 333
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
++N +++ K F + + + Y CG T YD HIGHA V D++ R L H + +
Sbjct: 80 LHNTMSRKKEVFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYRYLRHLGY-EVL 138
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKII +AN L ED +++RY
Sbjct: 139 YVRNFTDVDDKIIARANELGEDPLNLSRRY 168
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V D++ R L H + + + + TD+DDKII +AN L ED +++RY
Sbjct: 115 GHARVYVTFDVLYRYLRHLGY-EVLYVRNFTDVDDKIIARANELGEDPLNLSRRY 168
>gi|406940759|gb|EKD73431.1| hypothetical protein ACD_45C00321G0014 [uncultured bacterium]
Length = 460
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 109/174 (62%), Gaps = 13/174 (7%)
Query: 304 LEYF-----ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS 358
+EYF E M+K +L P + +EF+PHI + ++ L+ AY+ ++ VYFDV
Sbjct: 89 VEYFTQAFCEDMQKLNLLKPDDEPKATEFVPHIIALVEKLIANHYAYVAANGDVYFDVRQ 148
Query: 359 FPHYFKLWGRN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIE 411
F Y L RN +++ A VKR P DF LWK AKPGEP ++S WG GRPGWHIE
Sbjct: 149 FKQYGSLSHRNIDDLESGARVEISDVKRDPLDFVLWKMAKPGEPSWQSPWGHGRPGWHIE 208
Query: 412 CSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
CSAM+ G D+H GG DL FPHHENE AQS + N+ ++VNYWLH G+L+
Sbjct: 209 CSAMSMQLLGESFDMHGGGKDLIFPHHENEIAQSESATNK-KFVNYWLHAGYLQ 261
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++IYN +++ K F K +K Y CGPTVYD HIG+A D I R L + ++
Sbjct: 2 LQIYNSLSRKKETFQPIEKGKVKIYVCGPTVYDYCHIGNARSFTAFDAIVRYLRYRGYVV 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
+ V ++TDIDDKII +AN K+++ +V + YF
Sbjct: 62 TYV-RNITDIDDKIIKRANESKQEFISVVE-YF 92
>gi|356509902|ref|XP_003523681.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 557
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 110/172 (63%), Gaps = 9/172 (5%)
Query: 298 FNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVD 357
++RY E+ + M L P+ +VSE +P I I+ +L+ AYI D VYF+V+
Sbjct: 151 LSWRYCEEFCQDMVTLNCLSPSVEPKVSEHMPQIIDMIEKILNNGYAYI-VDGDVYFNVE 209
Query: 358 SFPHYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHI 410
FP Y KL R+ E + + K++P DFALWKSAKPGEP++ES WG GRPGWHI
Sbjct: 210 KFPEYGKLSSRDLEDNRAGERVAVDSRKKNPADFALWKSAKPGEPFWESPWGPGRPGWHI 269
Query: 411 ECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
ECSAM++ + G D+H GGIDL FPHHENE AQSCA +S ++ W+H G
Sbjct: 270 ECSAMSAAYLGYSFDIHGGGIDLVFPHHENEIAQSCAACKKSD-ISIWMHNG 320
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Query: 2 SILSQSSLALSYATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPT 61
S + SS L+ C P+ + + ++N +++TK F + ++ + Y CG T
Sbjct: 37 SFCATSSPPLTAEKGCGKSDAECPTLPE--VWLHNTMSRTKELFKPKVESKVGMYVCGVT 94
Query: 62 VYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAK 121
YD HIGHA V D++ R +H + + TD+DDKII +A L ED +++
Sbjct: 95 AYDLSHIGHARVYVNFDLLYRYFKH-LGFEVCYVRNFTDVDDKIIARAKELGEDPISLSW 153
Query: 122 RY 123
RY
Sbjct: 154 RY 155
>gi|403338267|gb|EJY68365.1| Cysteinyl-tRNA synthetase [Oxytricha trifallax]
Length = 670
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 125/208 (60%), Gaps = 22/208 (10%)
Query: 298 FNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVD 357
F+ R+E ++F M+ V P TRVSEF+P I FI+ +++ AY S+ SVYFDV
Sbjct: 139 FSRRFETDFFNDMKALNVELPDVITRVSEFVPEIVKFIEKIIENGFAY-ESNGSVYFDVK 197
Query: 358 SFPH-----YFKLWGR---NEN--------ITQHAV--KRSPFDFALWKSAKPGEPWYES 399
F Y KL NE+ +T H K+ DFALWK +KP EP + S
Sbjct: 198 KFNDHENHTYAKLEPTSVGNEDSMKESEGVLTNHETVDKKGKQDFALWKKSKPDEPVWNS 257
Query: 400 AWGKGRPGWHIECSAMASHFFGG-QVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYW 458
WG+GRPGWHIECSAMAS FF +D+H+GGIDL+FPHH+NE AQS A++N W+NY+
Sbjct: 258 PWGEGRPGWHIECSAMASEFFKEFPIDIHSGGIDLRFPHHDNEIAQSEAYYNCDNWINYF 317
Query: 459 LHTGHL--RGTDGTRRLRAARFITNLSG 484
+HTGHL G R L+ I ++ G
Sbjct: 318 IHTGHLHIEGRKMARSLKNFTTIKDVLG 345
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 24 LPSGYDTGIKIYNPITKTKVPFIIQ--NKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
L +G + I N T+ K F+ + +KN + WY CGPTVY H+GHA + DII+
Sbjct: 42 LVAGGMPKLHILNSFTREKELFVPRHADKNVVTWYMCGPTVYVDSHMGHARTYLSSDIIK 101
Query: 82 RILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
RI+ +F + ++TD+DDKII ++ E + ++R+
Sbjct: 102 RIMRDFFGYDVKMCMNITDVDDKIIKRSFEQGEPFGEFSRRF 143
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 13/100 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA + DII+RI+ +F + ++TD+DDKII ++ E + ++R+
Sbjct: 89 GHARTYLSSDIIKRIMRDFFGYDVKMCMNITDVDDKIIKRSFEQGEPFGEFSRRFETDFF 148
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLAL 243
D+K V+ V+T+ EF E++
Sbjct: 149 -------------NDMKALNVELPDVITRVSEFVPEIVKF 175
>gi|449517190|ref|XP_004165629.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
Length = 576
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 107/169 (63%), Gaps = 9/169 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY E+ M LPP+ +VS+ +P I I+ +LD AY D VYF+VD FP
Sbjct: 167 RYCEEFRRDMMYLHCLPPSVEPQVSDHMPQIIDMIKQILDNGYAYC-VDGDVYFNVDKFP 225
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L GR E ++ + K++P DFALWKSAK GEP++ES WG GRPGWHIECS
Sbjct: 226 EYGQLSGRKLEDNRAGERVSVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECS 285
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM++ + G D+H GG+DL FPHHENE AQSCA S V+YW+H G
Sbjct: 286 AMSASYLGYSFDIHGGGMDLVFPHHENEIAQSCATCRTSN-VSYWVHNG 333
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
++N +++ K F + + + Y CG T YD HIGHA V D++ R L H + +
Sbjct: 80 LHNTMSRKKEVFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYRYLRHLGY-EVL 138
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKII +AN L ED +++RY
Sbjct: 139 YVRNFTDVDDKIIARANELGEDPLNLSRRY 168
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V D++ R L H + + + + TD+DDKII +AN L ED +++RY
Sbjct: 115 GHARVYVTFDVLYRYLRHLGY-EVLYVRNFTDVDDKIIARANELGEDPLNLSRRY 168
>gi|358392462|gb|EHK41866.1| hypothetical protein TRIATDRAFT_134650 [Trichoderma atroviride IMI
206040]
Length = 799
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 128/363 (35%), Positives = 174/363 (47%), Gaps = 48/363 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRIL HYF + ++TDIDDKII KA + E K+ ++
Sbjct: 42 GHARNYVSTDIIRRILTHYFGFKLNFVMNITDIDDKIIIKARRQRLLEIEKNKSYSQEEL 101
Query: 200 LRLIFKILHQKVVRKLAI-----------------DLKKAKVDSGPVLTKCDEFRDELLA 242
+L L + D KV +G LT + D
Sbjct: 102 AKLTRTAFKAYAASSLPLLVENGNDLDETTYTAQRDAAYGKVLAGGTLTGEGKASDAEAK 161
Query: 243 LGVQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRY 302
+ + I + A K G +F I LP L + ++ T +F L
Sbjct: 162 IKMHISNMDAAAN-ALKTGSIFPGADEIFLPYLDSLYKETVD---TRDQTMFTDLTKSME 217
Query: 303 ELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHY 362
+L + M+ VL P TRV+E++P I F++T++D AY S+ SVYFD+ +F
Sbjct: 218 DL-FMADMDALNVLRPDHITRVTEYVPQIAKFVETIVDKGFAY-ESEGSVYFDIGAFEKA 275
Query: 363 FKLWGR------NENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRP 406
+ R N+ Q K+ DFALWK +K GEP++ S WG GRP
Sbjct: 276 GNSYARLRPESKNDKALQEEGEGSLSKNLGGKKGAGDFALWKKSKAGEPFWPSKWGDGRP 335
Query: 407 GWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF---HNQSQ--WVNYWLHT 461
GWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A+ H + + WV Y+LH
Sbjct: 336 GWHIECSVMASDILGSQMDIHSGGIDLAFPHHDNELAQSEAYFCEHGKGEHTWVRYFLHM 395
Query: 462 GHL 464
GHL
Sbjct: 396 GHL 398
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 32 IKIYNPIT-KTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
+K++N + VPF+ + WYACGPTVYD H+GHA V DIIRRIL HYF
Sbjct: 4 LKLHNSLKPGVPVPFVPIRSGEVSWYACGPTVYDKSHLGHARNYVSTDIIRRILTHYF 61
>gi|301778487|ref|XP_002924663.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 611
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 107/167 (64%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF-P 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 191 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIANGHAYSTAQGNVYFDLRSIGD 250
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G + V KR DFALWK+AKP E ++ S WGKGRPGWHIECS ++S
Sbjct: 251 KYGKLVGAVPSPVGEPVDSDKRHASDFALWKAAKPQEVFWASPWGKGRPGWHIECSTISS 310
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GG DL FPHHENE AQ AFH QW NY+LH+GHL
Sbjct: 311 LVFGRQLDIHSGGADLAFPHHENEIAQCEAFHQCRQWGNYFLHSGHL 357
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 22/147 (14%)
Query: 54 KWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINK----- 108
+ Y+CGPTVYD H+GHA V+ DIIRRIL F + I++ +TD+DDKII +
Sbjct: 122 RGYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFGCNIIMVMGITDVDDKIIRRAAEMN 181
Query: 109 ------ANSLKEDYK--TVAKRYFLPLIFKILHQKV------VGSIPTRGHAVCNVKLDI 154
AN +ED+K A + P ++ + + + + I GHA + ++
Sbjct: 182 VSPASLANLYEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIANGHAYSTAQGNV 241
Query: 155 ---IRRILEHYFHIHSIVISSVTDIDD 178
+R I + Y + V S V + D
Sbjct: 242 YFDLRSIGDKYGKLVGAVPSPVGEPVD 268
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + I++ +TD+DDKII +A + ++A Y
Sbjct: 137 GHACSYVRFDIIRRILTRVFGCNIIMVMGITDVDDKIIRRAAEMNVSPASLANLY 191
>gi|281346768|gb|EFB22352.1| hypothetical protein PANDA_014037 [Ailuropoda melanoleuca]
Length = 468
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 107/167 (64%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF-P 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 51 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIANGHAYSTAQGNVYFDLRSIGD 110
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G + V KR DFALWK+AKP E ++ S WGKGRPGWHIECS ++S
Sbjct: 111 KYGKLVGAVPSPVGEPVDSDKRHASDFALWKAAKPQEVFWASPWGKGRPGWHIECSTISS 170
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GG DL FPHHENE AQ AFH QW NY+LH+GHL
Sbjct: 171 LVFGRQLDIHSGGADLAFPHHENEIAQCEAFHQCRQWGNYFLHSGHL 217
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 26/113 (23%)
Query: 75 VKLDIIRRILEHYFHIHSIVISSVTDIDDKIINK-----------ANSLKEDYK--TVAK 121
V+ DIIRRIL F + I++ +TD+DDKII + AN +ED+K A
Sbjct: 3 VRFDIIRRILTRVFGCNIIMVMGITDVDDKIIRRAAEMNVSPASLANLYEEDFKQDMAAL 62
Query: 122 RYFLPLIFKILHQKV------VGSIPTRGHAVCNVKLDIIRRILEHYFHIHSI 168
+ P ++ + + + + I GHA + ++ YF + SI
Sbjct: 63 KVLPPTVYLRVTENIPQIISFIEGIIANGHAYSTAQGNV-------YFDLRSI 108
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 150 VKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
V+ DIIRRIL F + I++ +TD+DDKII +A + ++A Y
Sbjct: 3 VRFDIIRRILTRVFGCNIIMVMGITDVDDKIIRRAAEMNVSPASLANLY 51
>gi|343959638|dbj|BAK63676.1| probable cysteinyl-tRNA synthetase, mitochondrial precursor [Pan
troglodytes]
Length = 451
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 106/167 (63%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 30 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIARGNAYSTAKGNVYFDLKSRGD 89
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G V KR DFALWK+AKP E ++ S WG GRPGWHIECSA+AS
Sbjct: 90 KYGKLVGVVPGPVGEPVDSDKRHANDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIAS 149
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL
Sbjct: 150 MVFGNQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGHL 196
>gi|409045247|gb|EKM54728.1| hypothetical protein PHACADRAFT_258757 [Phanerochaete carnosa
HHB-10118-sp]
Length = 707
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/179 (46%), Positives = 111/179 (62%), Gaps = 17/179 (9%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP- 360
+E ++F+ M + V P TRV+E++P I SF++ ++ Y+ D SVYFD +F
Sbjct: 173 WEDQFFKDMRRLRVRDPDMLTRVTEYVPEIVSFVEGIIKNGYGYV-VDGSVYFDTWAFDS 231
Query: 361 ----HYFKL--WGRNEN---------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGR 405
Y KL W + ++ +RS DFALWK++KPGEP + S WG GR
Sbjct: 232 AENHDYAKLEPWSKGNRELLEEGEGALSAATGRRSAADFALWKASKPGEPSWPSPWGPGR 291
Query: 406 PGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
PGWHIECS MAS G +D+H+GG DL FPHH+NE AQS A+HN S WVNY+LHTGHL
Sbjct: 292 PGWHIECSVMASAILGDNMDIHSGGSDLAFPHHDNEMAQSEAYHNCSSWVNYFLHTGHL 350
>gi|335043568|ref|ZP_08536595.1| cysteinyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
gi|333790182|gb|EGL56064.1| cysteinyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
Length = 463
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 106/187 (56%), Gaps = 8/187 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY E + + GVL P + +E + I + I+TL+ AY + VY+DV F
Sbjct: 91 RYIDEMHKDADALGVLRPDIEPKATESMTEILAMIETLISKGLAYKADNGDVYYDVSQFN 150
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GRN E I + K P DF LWK+AK GEP +ES WG+GRPGWHIECS
Sbjct: 151 GYGKLSGRNIEDLRAGERIAVNEAKTDPLDFVLWKAAKAGEPAWESPWGEGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
AM++H G Q D+H GG DL+FPHHENE AQS H Q VNYW+H G +R D
Sbjct: 211 AMSAHCLGEQFDIHGGGQDLQFPHHENEIAQSEGAHG-CQSVNYWMHNGFVRIDDEKMSK 269
Query: 474 RAARFIT 480
F T
Sbjct: 270 SLGNFFT 276
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + + Y CG TVYD H+GHA V D++ R L
Sbjct: 2 LKIYNSLTRQKEVFKPLQEGKVNMYVCGMTVYDLCHVGHARVMVVFDVVTRYL-RALGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
+ ++TDIDDKII +A E + + +RY
Sbjct: 61 VTYVRNITDIDDKIIKRAAENGESIQALTERYI 93
>gi|356515262|ref|XP_003526320.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 561
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 108/169 (63%), Gaps = 9/169 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY E+ + M L P+ +VSE +P I I+ +L+ AYI D VYF+V+ FP
Sbjct: 156 RYCEEFCQDMVTLNCLSPSVEPKVSEHMPQIIDMIEKILNNGYAYI-VDGDVYFNVEKFP 214
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL R+ E + + K++P DFALWKSAKPGEP++ES WG GRPGWHIECS
Sbjct: 215 EYGKLSSRDLEDNRAGERVAVDSRKKNPADFALWKSAKPGEPFWESRWGPGRPGWHIECS 274
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM++ + G D+H GGIDL FPHHENE AQSCA +S ++ W+H G
Sbjct: 275 AMSAAYLGYSFDIHGGGIDLVFPHHENEIAQSCAACKKSD-ISVWMHNG 322
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
++N ++KTK F + + + Y CG T YD HIGHA V D++ R +H
Sbjct: 69 LHNTMSKTKELFKPKVDSKVGMYVCGVTAYDLSHIGHARVYVNFDLLYRYFKH-LGFQVC 127
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKII +A L ED ++++RY
Sbjct: 128 YVRNFTDVDDKIIARAKELGEDPISLSRRY 157
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V D++ R +H + + TD+DDKII +A L ED ++++RY
Sbjct: 104 GHARVYVNFDLLYRYFKH-LGFQVCYVRNFTDVDDKIIARAKELGEDPISLSRRY 157
>gi|351699386|gb|EHB02305.1| Putative cysteinyl-tRNA synthetase, mitochondrial [Heterocephalus
glaber]
Length = 503
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 105/167 (62%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT + RV+E +P I SFI+ ++ AY + +VYFDV +
Sbjct: 83 YEEDFKQDMVALKVLPPTVSLRVTEMVPQIISFIEGIIARGHAYATAKGNVYFDVRARGD 142
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL AV KR DFALWK+AKPGE + S WG GRPGWHIECS +AS
Sbjct: 143 KYGKLVSVVPAPAAEAVDSDKRHAGDFALWKAAKPGEVSWASPWGPGRPGWHIECSTIAS 202
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG +D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL
Sbjct: 203 AVFGSHLDVHSGGIDLAFPHHENEIAQCEVFHQCGQWGNYFLHSGHL 249
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 22/145 (15%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL--- 112
Y+CGPTVYD H+GHA V+ DIIRR+L F +++ +TD+DDKI+ +A +
Sbjct: 16 YSCGPTVYDHAHLGHACSYVRFDIIRRVLTQVFGCGIVMVMGITDVDDKILRRAREMDMS 75
Query: 113 --------KEDYK--TVAKRYFLPLIFKILHQKV------VGSIPTRGHAVCNVKLDI-- 154
+ED+K VA + P + + + V + I RGHA K ++
Sbjct: 76 PAALARLYEEDFKQDMVALKVLPPTVSLRVTEMVPQIISFIEGIIARGHAYATAKGNVYF 135
Query: 155 -IRRILEHYFHIHSIVISSVTDIDD 178
+R + Y + S+V + + D
Sbjct: 136 DVRARGDKYGKLVSVVPAPAAEAVD 160
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRR+L F +++ +TD+DDKI+ +A + +A+ Y
Sbjct: 29 GHACSYVRFDIIRRVLTQVFGCGIVMVMGITDVDDKILRRAREMDMSPAALARLY 83
>gi|116203083|ref|XP_001227353.1| hypothetical protein CHGG_09426 [Chaetomium globosum CBS 148.51]
gi|88177944|gb|EAQ85412.1| hypothetical protein CHGG_09426 [Chaetomium globosum CBS 148.51]
Length = 794
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 131/392 (33%), Positives = 182/392 (46%), Gaps = 68/392 (17%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRIL H+F ++ + II KA + E K + +
Sbjct: 42 GHARNYVSTDIIRRILIHHFGLNVNFV---------IIIKARRKRLLELEKEKPYSPSHI 92
Query: 200 LRLIFKILHQKVVRKL---------AID------LKKAK---VDSGPVLTKCDEFRDELL 241
L FK L A+D K+A V +G L+ + D
Sbjct: 93 RELAFKAFQAYAESNLPLLAGAGQSAVDEHNYPERKEAAYGHVLAGGSLSGEGKPGDAEA 152
Query: 242 ALGVQIKDQKCEATWQFKDGKVFSDRVFISLP----LYLILIQVSLLGPLTLRTVVFEFL 297
+ + + + A KD F + LP LY I S T T E
Sbjct: 153 KVKMHLGNMDAAAK-SLKDSSGFDGAEEVLLPYLDSLYKETIDTSDQTMFTDLTQAMEKA 211
Query: 298 FNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVD 357
F+ + ME VLPP TRV+E++P I SF++ ++ AY ++ SVYFD+
Sbjct: 212 FS--------DDMEALNVLPPDAVTRVTEYVPQIVSFVEQIIAKGFAY-EANGSVYFDIA 262
Query: 358 SFPHYFKLWGR------NENITQHAV----------KRSPFDFALWKSAKPGEPWYESAW 401
+F + R N+ Q K+ DFALWK +KPGEP++ S W
Sbjct: 263 AFEQAGNTYARLRPESKNDKALQEEGEGSLSKSLEGKKRSGDFALWKKSKPGEPFWPSPW 322
Query: 402 GKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQ-----WVN 456
G GRPGWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A+ +Q + WVN
Sbjct: 323 GAGRPGWHIECSVMASDKLGEQMDIHSGGIDLAFPHHDNELAQSEAYFHQYERGEHSWVN 382
Query: 457 YWLHTGHLR--GTDGTRRLRAARFITNLSGST 486
Y+LH GHL G+ ++ L+ + I + +T
Sbjct: 383 YFLHMGHLSIAGSKMSKSLKNFQTIQDALATT 414
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 30 TGIKIYNPIT-KTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
I ++N + + VPF+ + + + WYACGPT YD H+GHA V DIIRRIL H+F
Sbjct: 2 AAITVHNSLKPGSPVPFVPREEGKVSWYACGPTTYDLSHLGHARNYVSTDIIRRILIHHF 61
Query: 89 HIH 91
++
Sbjct: 62 GLN 64
>gi|145547719|ref|XP_001459541.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427366|emb|CAK92144.1| unnamed protein product [Paramecium tetraurelia]
Length = 668
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 118/194 (60%), Gaps = 16/194 (8%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E ++F++ME + P TRVS+++P I +FIQ ++ AY S+ SVYF+V +
Sbjct: 129 WEKDFFDAMEALNIELPDVITRVSDYVPEIVTFIQKIISNGYAY-ESNGSVYFEVQKYIA 187
Query: 362 ----YFKL----------WGRNEN-ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRP 406
Y K+ G E+ + + + K+SP+DFALWK++KP EP ++S WG+GRP
Sbjct: 188 DGHTYPKMRPEVNAELLQEGEGESQVNKQSEKKSPYDFALWKASKPEEPKWQSPWGEGRP 247
Query: 407 GWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRG 466
GWHIECS MAS G +DLH GGIDL FPHH+N AQ+ A N QW+NY++H GHL
Sbjct: 248 GWHIECSVMASAILGNPIDLHAGGIDLLFPHHDNSLAQAEACFNCEQWINYFIHLGHLNI 307
Query: 467 TDGTRRLRAARFIT 480
D F+T
Sbjct: 308 ADRKMSKSLKNFMT 321
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 27 GYDTGIKIYNPITKTK-VPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILE 85
Y TG+K+ N + ++ VPFI N + +Y CGPTVY + H+GHA + +D+IRR L
Sbjct: 32 SYVTGLKLANSLKGSELVPFIPINGRQVNFYYCGPTVYSNSHLGHARTYLGIDVIRRTLR 91
Query: 86 HYFHIHSIVISSVTDIDDKIINKANSLKEDY 116
YFH + + ++TDIDDKII AN+ K+D+
Sbjct: 92 DYFHYDLLSVMNITDIDDKIITGANAAKQDF 122
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDY 191
GHA + +D+IRR L YFH + + ++TDIDDKII AN+ K+D+
Sbjct: 75 GHARTYLGIDVIRRTLRDYFHYDLLSVMNITDIDDKIITGANAAKQDF 122
>gi|219115755|ref|XP_002178673.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410408|gb|EEC50338.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 647
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 127/216 (58%), Gaps = 28/216 (12%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RYE E+ + M GV PPT TRV+E++ + ++I ++ AY S+ SVYFDV +F
Sbjct: 125 RYEAEFHQDMADLGVAPPTTLTRVTEYMDEVTAYIANIIQRGFAY-ESNGSVYFDVQTFS 183
Query: 361 -----HYFKLW----GRNE-------NITQHAV--KRSPFDFALWKSAKPGEPWYESAWG 402
HY KL G E +TQ V K+SP DFALWK KPGEP ++S WG
Sbjct: 184 DTPHMHYCKLAPEQVGNAELLAEGEGKLTQDFVTDKQSPRDFALWKKTKPGEPSWDSPWG 243
Query: 403 KGRPGWHIECSAMASHFFG-----GQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNY 457
GRPGWHIECS MAS ++DLH+GG+DLKFPHH+NE AQ+ A ++QWVNY
Sbjct: 244 PGRPGWHIECSVMASDVLDRLLQHRRMDLHSGGVDLKFPHHDNEMAQAEAECGETQWVNY 303
Query: 458 WLHTGHL--RGTDGTRRLRAARFITNLSGSTIGYTR 491
++H GHL +G ++ L+ FIT I R
Sbjct: 304 FVHAGHLHIKGLKMSKSLK--NFITIQQALEINSAR 337
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 5/124 (4%)
Query: 5 SQSSLALSYATSCESPKWSLPS----GYDTGIKIYNPITKTKVPFI-IQNKNHLKWYACG 59
+ SL + + C P W P+ +D + I N +T+ K F+ + + + WY CG
Sbjct: 3 ADESLPATGTSGCPQPPWEKPTPAEVTHDPRLWITNSLTRQKEHFLTMDGSSRMVWYMCG 62
Query: 60 PTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTV 119
PTVY H+GHA + DIIRRILE +F H ++ +VTDIDDKII +A + +
Sbjct: 63 PTVYAPSHMGHARTYLGFDIIRRILERHFGYHVTLVMNVTDIDDKIIERAAEQHVGHLQL 122
Query: 120 AKRY 123
A+RY
Sbjct: 123 ARRY 126
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA + DIIRRILE +F H ++ +VTDIDDKII +A + +A+RY
Sbjct: 72 GHARTYLGFDIIRRILERHFGYHVTLVMNVTDIDDKIIERAAEQHVGHLQLARRYEAE-- 129
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLA 242
HQ D+ V LT+ E+ DE+ A
Sbjct: 130 ---FHQ--------DMADLGVAPPTTLTRVTEYMDEVTA 157
>gi|189409152|ref|NP_077210.1| probable cysteine--tRNA ligase, mitochondrial precursor [Mus
musculus]
gi|148690118|gb|EDL22065.1| mCG11180, isoform CRA_a [Mus musculus]
Length = 552
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 109/174 (62%), Gaps = 7/174 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
+E E+ + M VLPPT RV+E IP I +FI+ ++ AY + SVYFD+ +
Sbjct: 128 FEEEFKQDMAALKVLPPTVYLRVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGD 187
Query: 361 HYFKLWGRNENITQHAV----KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
Y KL + T KR DFALWK+AKP E ++ S WG GRPGWHIECS MA
Sbjct: 188 KYGKLVNTVPSATAEPAGDSDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMA 247
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTD 468
S FG +D+HTGGIDL FPHHENE AQS FH QW NY+LH+GHL +GT+
Sbjct: 248 SEVFGSHLDIHTGGIDLAFPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTE 301
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 61/91 (67%)
Query: 22 WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
W P G DTG++++N +T K P I+ + + WY+CGPTVYD H+GHA V+ DIIR
Sbjct: 27 WQRPQGQDTGVQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIR 86
Query: 82 RILEHYFHIHSIVISSVTDIDDKIINKANSL 112
RIL F + ++ S+TD+DDKII +AN +
Sbjct: 87 RILTRVFGCNVVMAMSITDVDDKIIKRANEM 117
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL 187
GHA V+ DIIRRIL F + ++ S+TD+DDKII +AN +
Sbjct: 74 GHACSYVRFDIIRRILTRVFGCNVVMAMSITDVDDKIIKRANEM 117
>gi|12845041|dbj|BAB26596.1| unnamed protein product [Mus musculus]
Length = 552
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 109/174 (62%), Gaps = 7/174 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
+E E+ + M VLPPT RV+E IP I +FI+ ++ AY + SVYFD+ +
Sbjct: 128 FEEEFKQDMAALKVLPPTVYLRVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGD 187
Query: 361 HYFKLWGRNENITQHAV----KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
Y KL + T KR DFALWK+AKP E ++ S WG GRPGWHIECS MA
Sbjct: 188 KYGKLVNTVPSATAEPAGDSDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMA 247
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTD 468
S FG +D+HTGGIDL FPHHENE AQS FH QW NY+LH+GHL +GT+
Sbjct: 248 SEVFGSHLDIHTGGIDLAFPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTE 301
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 61/91 (67%)
Query: 22 WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
W P G DTG++++N +T K P I+ + + WY+CGPTVYD H+GHA V+ DIIR
Sbjct: 27 WQRPQGQDTGVQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIR 86
Query: 82 RILEHYFHIHSIVISSVTDIDDKIINKANSL 112
RIL F + ++ S+TD+DDKII +AN +
Sbjct: 87 RILTRVFGCNVVMAMSITDVDDKIIKRANEM 117
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL 187
GHA V+ DIIRRIL F + ++ S+TD+DDKII +AN +
Sbjct: 74 GHACSYVRFDIIRRILTRVFGCNVVMAMSITDVDDKIIKRANEM 117
>gi|115502847|sp|Q8BYM8.2|SYCM_MOUSE RecName: Full=Probable cysteine--tRNA ligase, mitochondrial;
AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS;
Flags: Precursor
gi|148690122|gb|EDL22069.1| mCG11180, isoform CRA_e [Mus musculus]
Length = 551
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 110/173 (63%), Gaps = 6/173 (3%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
+E E+ + M VLPPT RV+E IP I +FI+ ++ AY + SVYFD+ +
Sbjct: 128 FEEEFKQDMAALKVLPPTVYLRVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGD 187
Query: 361 HYFKLWGRNENITQH---AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL + T + KR DFALWK+AKP E ++ S WG GRPGWHIECS MAS
Sbjct: 188 KYGKLVNTVPSATAEPGDSDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMAS 247
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTD 468
FG +D+HTGGIDL FPHHENE AQS FH QW NY+LH+GHL +GT+
Sbjct: 248 EVFGSHLDIHTGGIDLAFPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTE 300
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 61/91 (67%)
Query: 22 WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
W P G DTG++++N +T K P I+ + + WY+CGPTVYD H+GHA V+ DIIR
Sbjct: 27 WQRPQGQDTGVQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIR 86
Query: 82 RILEHYFHIHSIVISSVTDIDDKIINKANSL 112
RIL F + ++ S+TD+DDKII +AN +
Sbjct: 87 RILTRVFGCNVVMAMSITDVDDKIIKRANEM 117
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL 187
GHA V+ DIIRRIL F + ++ S+TD+DDKII +AN +
Sbjct: 74 GHACSYVRFDIIRRILTRVFGCNVVMAMSITDVDDKIIKRANEM 117
>gi|296188978|ref|XP_002742588.1| PREDICTED: probable cysteine--tRNA ligase, mitochondrial
[Callithrix jacchus]
Length = 565
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 105/167 (62%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV----D 357
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ D
Sbjct: 142 YEEDFKQDMAALKVLPPTVYLRVTENIPQIVSFIEGIIARGHAYSTAKGNVYFDLKSRGD 201
Query: 358 SFPHYFKLWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
+ + + KR P DFALWK+AKP E ++ S WG GRPGWHIECSA+AS
Sbjct: 202 KYGKLVSVAPGPAGEPADSDKRHPSDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIAS 261
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL
Sbjct: 262 MVFGSQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGHL 308
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 85/160 (53%), Gaps = 19/160 (11%)
Query: 14 ATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
A+ W P+G DTG+++YN +T K P I+ + WY+CGPTVYD H+GHA
Sbjct: 33 ASGGRGKAWLQPTGRDTGVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACS 92
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL-----------KEDYK--TVA 120
V+ DIIRRIL F + +++ +TD+DDKII +AN + +ED+K A
Sbjct: 93 YVRFDIIRRILTKVFGCNIVMVMGITDVDDKIIKRANEMNISPASLASLYEEDFKQDMAA 152
Query: 121 KRYFLPLIFKILHQKV------VGSIPTRGHAVCNVKLDI 154
+ P ++ + + + + I RGHA K ++
Sbjct: 153 LKVLPPTVYLRVTENIPQIVSFIEGIIARGHAYSTAKGNV 192
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + +++ +TD+DDKII +AN + ++A Y
Sbjct: 88 GHACSYVRFDIIRRILTKVFGCNIVMVMGITDVDDKIIKRANEMNISPASLASLY 142
>gi|301117980|ref|XP_002906718.1| cysteinyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
gi|262108067|gb|EEY66119.1| cysteinyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
Length = 688
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 117/184 (63%), Gaps = 22/184 (11%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E + E M + PT TRVSE++P + F++ ++ AY S+ SVYFD +F
Sbjct: 160 WEKSFLEDMAALNIKTPTVITRVSEYVPEVVEFVEGIIKNGFAY-ESNGSVYFDTAAFGQ 218
Query: 362 Y-FKLWGR--NENITQHAV--------------KRSPFDFALWKSAKPGEPWYESAWGKG 404
K +G+ EN+ Q + KR+ DFALWK +K GEP++ S WG+G
Sbjct: 219 SKGKAYGKLLPENVGQSELLAEGEGALSAGQSDKRNASDFALWKKSKSGEPFWPSPWGEG 278
Query: 405 RPGWHIECSAMAS----HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLH 460
RPGWHIECSAMAS H GG++D+H+GGIDL+FPHH+NE AQS A+ + SQWVNY++H
Sbjct: 279 RPGWHIECSAMASDALKHLAGGKIDVHSGGIDLRFPHHDNEIAQSEAYFDFSQWVNYFVH 338
Query: 461 TGHL 464
TGHL
Sbjct: 339 TGHL 342
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 14 ATSCESPKWSLPSGYDT---------GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYD 64
A + + P W P D +++YN +T++K F+ + WY CGPTVYD
Sbjct: 8 APAVKQPTWYPPRPIDGLTEYWNTHYPLRLYNSMTRSKTAFVPMQGKRVLWYMCGPTVYD 67
Query: 65 SPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS 111
H+GH D +RRILE YF + ++ ++TDIDDKII +A+
Sbjct: 68 QTHLGHGRTYTCFDYVRRILEDYFGLEVELVMNITDIDDKIILRASE 114
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS 186
GH D +RRILE YF + ++ ++TDIDDKII +A+
Sbjct: 72 GHGRTYTCFDYVRRILEDYFGLEVELVMNITDIDDKIILRASE 114
>gi|410227826|gb|JAA11132.1| cysteinyl-tRNA synthetase 2, mitochondrial (putative) [Pan
troglodytes]
gi|410248272|gb|JAA12103.1| cysteinyl-tRNA synthetase 2, mitochondrial (putative) [Pan
troglodytes]
gi|410290326|gb|JAA23763.1| cysteinyl-tRNA synthetase 2, mitochondrial (putative) [Pan
troglodytes]
Length = 564
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 106/167 (63%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 143 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIARGNAYSTAKGNVYFDLKSRGD 202
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G V KR DFALWK+AKP E ++ S WG GRPGWHIECSA+AS
Sbjct: 203 KYGKLVGVVPGPVGEPVDSDKRHANDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIAS 262
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL
Sbjct: 263 MLFGNQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGHL 309
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 67/110 (60%)
Query: 14 ATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
A+ W P+G +TG+++YN +T K P I+ + WY+CGPTVYD H+GHA
Sbjct: 34 ASGGRGRAWLQPTGRETGVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACS 93
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
V+ DIIRRIL F + +++ +TD+DDKII +AN + ++A Y
Sbjct: 94 YVRFDIIRRILTKVFGCNIVMVMGITDVDDKIIKRANEMNISPASLASLY 143
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + +++ +TD+DDKII +AN + ++A Y
Sbjct: 89 GHACSYVRFDIIRRILTKVFGCNIVMVMGITDVDDKIIKRANEMNISPASLASLY 143
>gi|26332939|dbj|BAC30187.1| unnamed protein product [Mus musculus]
Length = 581
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 110/173 (63%), Gaps = 6/173 (3%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
+E E+ + M VLPPT RV+E IP I +FI+ ++ AY + SVYFD+ +
Sbjct: 158 FEEEFKQDMAALKVLPPTVYLRVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGD 217
Query: 361 HYFKLWGRNENITQH---AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL + T + KR DFALWK+AKP E ++ S WG GRPGWHIECS MAS
Sbjct: 218 KYGKLVNTVPSATAEPGDSDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMAS 277
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTD 468
FG +D+HTGGIDL FPHHENE AQS FH QW NY+LH+GHL +GT+
Sbjct: 278 EVFGSHLDIHTGGIDLAFPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTE 330
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 61/92 (66%)
Query: 22 WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
W P G DTG++++N +T K P I+ + + WY+CGPTVYD H+GHA V+ DIIR
Sbjct: 57 WQRPQGQDTGVQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIR 116
Query: 82 RILEHYFHIHSIVISSVTDIDDKIINKANSLK 113
RIL F + ++ S+TD+DDKII +AN +
Sbjct: 117 RILTRVFGCNVVMAMSITDVDDKIIKRANEMN 148
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK 188
GHA V+ DIIRRIL F + ++ S+TD+DDKII +AN +
Sbjct: 104 GHACSYVRFDIIRRILTRVFGCNVVMAMSITDVDDKIIKRANEMN 148
>gi|261599941|dbj|BAI45221.1| cysteinyl tRNA synthetase [Beta vulgaris]
Length = 582
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 106/169 (62%), Gaps = 9/169 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E+ + M LPP+ RVS+ +P I I+ ++D AY G D VYF V+ FP
Sbjct: 173 RFCDEFHQDMSYLHCLPPSVEPRVSDHMPQIIDMIKQIVDNGFAY-GVDGDVYFSVEKFP 231
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L GR E + + KR+P DFALWKSAK GEP++ES WG GRPGWHIECS
Sbjct: 232 DYGRLSGRKLEDNRAGERVAIDSRKRNPADFALWKSAKEGEPFWESPWGPGRPGWHIECS 291
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM+S + G D+H GG+DL FPHHENE QSCA +S + YW+H G
Sbjct: 292 AMSSVYLGYSFDIHGGGMDLMFPHHENEIVQSCAACCESN-IRYWVHNG 339
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
+YN +++ K F + + Y CG T YD HIGHA V DI+ R L+ Y
Sbjct: 86 VYNTMSRKKEIFKPKVDGKVGMYVCGVTAYDFSHIGHARAYVTFDILYRYLK-YLGYDVC 144
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKII +AN + E+ ++++R+
Sbjct: 145 YVRNFTDVDDKIIARANEVGENPISLSRRF 174
>gi|261599939|dbj|BAI45220.1| cysteinyl tRNA synthetase [Beta vulgaris]
Length = 582
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 106/169 (62%), Gaps = 9/169 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E+ + M LPP+ RVS+ +P I I+ ++D AY G D VYF V+ FP
Sbjct: 173 RFCDEFHQDMSYLHCLPPSVEPRVSDHMPQIIDMIKQIVDNGFAY-GVDGDVYFSVEKFP 231
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L GR E + + KR+P DFALWKSAK GEP++ES WG GRPGWHIECS
Sbjct: 232 DYGRLSGRKLEDNRAGERVAIDSRKRNPADFALWKSAKEGEPFWESPWGPGRPGWHIECS 291
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM+S + G D+H GG+DL FPHHENE QSCA +S + YW+H G
Sbjct: 292 AMSSVYLGYSFDIHGGGMDLMFPHHENEIVQSCAACCESN-IRYWVHNG 339
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
+YN +++ K F + + Y CG T YD HIGHA V DI+ R L+ Y
Sbjct: 86 VYNTMSRKKEIFKPKVDGKVGMYVCGVTAYDFSHIGHARAYVTFDILYRYLK-YLGYDVC 144
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKII +AN + E+ ++++R+
Sbjct: 145 YVRNFTDVDDKIIARANEVGENPISLSRRF 174
>gi|303232418|ref|ZP_07319110.1| cysteine--tRNA ligase [Atopobium vaginae PB189-T1-4]
gi|302481502|gb|EFL44570.1| cysteine--tRNA ligase [Atopobium vaginae PB189-T1-4]
Length = 508
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 106/178 (59%), Gaps = 11/178 (6%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y + E M +F +L P R ++ I +Q+ IQTL+ K AY+ + VYF V S
Sbjct: 92 YSRAFIEQMHRFNILDPDIRPRATQEIHAMQTMIQTLIANKCAYVADNGDVYFSVRSDAS 151
Query: 362 YFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
Y + GRN E + + KR PFDFALWK+AKPGEP ++S WG GRPGWH EC A
Sbjct: 152 YGTVSGRNLDDLRAGERVEVNDAKRDPFDFALWKAAKPGEPAWDSPWGAGRPGWHTECCA 211
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQS-CAFHNQSQWVNYWLHTGHLRGTDGTR 471
M H+ +D+H GG DL FPHHENE AQS CA+ +YW+HTG LR DG +
Sbjct: 212 MIHHYLDAPIDIHGGGQDLMFPHHENENAQSVCAW--SQPLAHYWMHTGMLR-VDGEK 266
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN T K FI K ++ Y CGPTVYD HIG+A + D IRR L+ Y +
Sbjct: 4 IYNSQTHKKEEFIPAEKGRVRMYVCGPTVYDQIHIGNARTFLSFDTIRRYLQ-YKGFEVV 62
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKI 131
++TD+DDKIIN+AN + +A+ Y I ++
Sbjct: 63 FAQNLTDVDDKIINRANENGVEASEIARTYSRAFIEQM 100
>gi|387129742|ref|YP_006292632.1| cysteinyl-tRNA synthetase [Methylophaga sp. JAM7]
gi|386271031|gb|AFJ01945.1| Cysteinyl-tRNA synthetase [Methylophaga sp. JAM7]
Length = 464
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/187 (44%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY E + GVL P + +E + I +QTL+D AY + VY+DV FP
Sbjct: 91 RYIAEMHRDADALGVLKPDYEPKATESMGEILEMVQTLIDKGLAYTADNGDVYYDVSEFP 150
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR+ E + + K P DF LWK+AK GEP +ES WG GRPGWHIECS
Sbjct: 151 SYGKLSGRDVNELRAGERVAVNEAKTDPLDFVLWKAAKAGEPAWESPWGLGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
AM+++ G D+H GG DL+FPHHENE AQS H Q VNYW+H G +R D
Sbjct: 211 AMSANCLGEHFDIHGGGQDLQFPHHENEIAQSEGAHG-CQSVNYWMHNGFVRIDDEKMSK 269
Query: 474 RAARFIT 480
F T
Sbjct: 270 SLGNFFT 276
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KI+N ++K K F + + Y CG TVYD H+GHA V D++ R L +
Sbjct: 2 LKIHNTLSKEKEVFKPLQEGKVNMYVCGMTVYDLCHVGHARVMVVFDVVTRYLRASGY-D 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TDIDDKII +A E + + +RY +
Sbjct: 61 VTYVRNITDIDDKIIKRATENGETIEALTERYIAEM 96
>gi|326523811|dbj|BAJ93076.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 573
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 106/174 (60%), Gaps = 9/174 (5%)
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFD 355
F + RY ++ M LPP+ RVS+ I I + I+ ++D AY+ S VYF
Sbjct: 159 FSLSKRYSDDFLSDMAHLQCLPPSVEPRVSDHIDQIVTMIKQIIDNGCAYVVSG-DVYFS 217
Query: 356 VDSFPHYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGW 408
VD+FP Y KL GR E + K++P DFALWK+AK GEPW++S WG GRPGW
Sbjct: 218 VDNFPEYRKLSGRKLDDNRAGERVAVDERKKNPADFALWKAAKDGEPWWDSPWGPGRPGW 277
Query: 409 HIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
HIECSAM++ + G D+H GG DL FPHHENE AQS A S +NYW+H G
Sbjct: 278 HIECSAMSAQYLGNSFDIHGGGEDLIFPHHENEIAQSRAACCDSS-INYWVHNG 330
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKN-HLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+ +YN ++ + PF + + Y CG T YD HIGHA V D++ R L Y
Sbjct: 74 MHLYNTRSRRREPFRPRAPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLFRYL-RYLDY 132
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILH-QKVVGSIPTRGHAVCN 149
+ + TDIDDKII +AN L ED +++KRY + + H Q + S+ R +
Sbjct: 133 EVRYVRNFTDIDDKIIARANQLGEDPFSLSKRYSDDFLSDMAHLQCLPPSVEPRVSDHID 192
Query: 150 VKLDIIRRILEH 161
+ +I++I+++
Sbjct: 193 QIVTMIKQIIDN 204
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V D++ R L Y + + TDIDDKII +AN L ED +++KRY +
Sbjct: 112 GHARAYVAFDVLFRYL-RYLDYEVRYVRNFTDIDDKIIARANQLGEDPFSLSKRYSDDFL 170
Query: 204 FKILH 208
+ H
Sbjct: 171 SDMAH 175
>gi|220934112|ref|YP_002513011.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|254781696|sp|B8GNT5.1|SYC_THISH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|219995422|gb|ACL72024.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 460
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 102/165 (61%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E E GVLPP+ R +E I + + I TL++ AY G + VY+ V F Y +L G
Sbjct: 98 EDAEALGVLPPSAEPRATEHIDGMLAMIGTLVERGYAYAGDNGDVYYAVAKFEPYGRLSG 157
Query: 368 R-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+ E + KR P DF LWK+AKPGEP ++S WG GRPGWHIECSAM++H+
Sbjct: 158 KRLEDLRAGERVAPDEAKRDPLDFVLWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTHYL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS A + +VNYW+H G +R
Sbjct: 218 GNHFDIHGGGQDLQFPHHENEIAQSEAATCE-HFVNYWMHNGFVR 261
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++I+N +T+ K F ++ Y CG TVYD H+GHA V D++ R L+
Sbjct: 2 LQIHNSLTRRKETFTPMEPGRVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLKA-LGFD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
I ++TDIDDKII +A ED + + R+ +
Sbjct: 61 VTYIRNITDIDDKIIRRAAENGEDIRALTDRFIAAM 96
>gi|410335611|gb|JAA36752.1| cysteinyl-tRNA synthetase 2, mitochondrial (putative) [Pan
troglodytes]
Length = 564
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 106/167 (63%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 143 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIARGNAYSTAKGNVYFDLKSRGD 202
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G V KR DFALWK+AKP E ++ S WG GRPGWHIECSA+AS
Sbjct: 203 KYGKLVGVVPGPVGEPVDSDKRHANDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIAS 262
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL
Sbjct: 263 MVFGNQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGHL 309
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 67/110 (60%)
Query: 14 ATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
A+ W P+G +TG+++YN +T K P I+ + WY+CGPTVYD H+GHA
Sbjct: 34 ASGGRGRAWLQPTGRETGVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACS 93
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
V+ DIIRRIL F + +++ +TD+DDKII +AN + ++A Y
Sbjct: 94 YVRFDIIRRILTKVFGCNIVMVMGITDVDDKIIKRANEMNISPASLASLY 143
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + +++ +TD+DDKII +AN + ++A Y
Sbjct: 89 GHACSYVRFDIIRRILTKVFGCNIVMVMGITDVDDKIIKRANEMNISPASLASLY 143
>gi|338730397|ref|YP_004659789.1| cysteinyl-tRNA synthetase [Thermotoga thermarum DSM 5069]
gi|335364748|gb|AEH50693.1| cysteinyl-tRNA synthetase [Thermotoga thermarum DSM 5069]
Length = 464
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 107/170 (62%), Gaps = 9/170 (5%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
EY+ + GV P A + S+FIP + I+ L++ AY+ SD VYFDV FP Y +
Sbjct: 94 EYWRDITALGVRAPNFAPKTSDFIPDMIEAIKKLIEKGYAYV-SDGDVYFDVQKFPRYGE 152
Query: 365 LWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L R+ + KR+P DFALWK+AKPGEP ++S WGKGRPGWHIECS M++
Sbjct: 153 LSHRSIEEMLVGARVDPSEKKRNPVDFALWKAAKPGEPSWDSPWGKGRPGWHIECSVMST 212
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGT 467
G +D+H GG DL FPHHENE+AQS A + ++V YW+H G +R T
Sbjct: 213 KLLGSTLDIHAGGEDLIFPHHENEKAQSEALTGE-RFVKYWMHNGMIRMT 261
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 53 LKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL 112
+K Y CGPTVY H+G+A V D RR LE Y I++ + TDIDDKIIN+A
Sbjct: 22 VKMYVCGPTVYGLIHVGNARPVVVFDAFRRFLE-YRGYRVILVQNFTDIDDKIINRAKEW 80
Query: 113 KEDYKTVAKRY 123
D+ VA +
Sbjct: 81 GVDFSDVANTF 91
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
G+A V D RR LE Y I++ + TDIDDKIIN+A D+ VA +
Sbjct: 38 GNARPVVVFDAFRRFLE-YRGYRVILVQNFTDIDDKIINRAKEWGVDFSDVANTF 91
>gi|397524294|ref|XP_003832135.1| PREDICTED: probable cysteine--tRNA ligase, mitochondrial isoform 1
[Pan paniscus]
Length = 566
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 105/167 (62%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 145 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIARGNAYSTAKGNVYFDLKSRGD 204
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G KR DFALWK+AKP E ++ S WG GRPGWHIECSA+AS
Sbjct: 205 KYGKLVGVVPGPVGEPADSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIAS 264
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL
Sbjct: 265 MVFGNQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGHL 311
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 46/70 (65%)
Query: 54 KWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK 113
K Y+CGPTVYD H+GHA V+ DIIRRIL F + +++ +TD+DDKII +AN +
Sbjct: 76 KRYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVFGCNIVMVMGITDVDDKIIKRANEMN 135
Query: 114 EDYKTVAKRY 123
++A Y
Sbjct: 136 ISPASLASLY 145
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + +++ +TD+DDKII +AN + ++A Y
Sbjct: 91 GHACSYVRFDIIRRILTKVFGCNIVMVMGITDVDDKIIKRANEMNISPASLASLY 145
>gi|26344287|dbj|BAC35800.1| unnamed protein product [Mus musculus]
gi|148690123|gb|EDL22070.1| mCG11180, isoform CRA_f [Mus musculus]
Length = 392
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 121/203 (59%), Gaps = 13/203 (6%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
+E E+ + M VLPPT RV+E IP I +FI+ ++ AY + SVYFD+ +
Sbjct: 128 FEEEFKQDMAALKVLPPTVYLRVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGD 187
Query: 361 HYFKLWGRNENITQH---AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL + T + KR DFALWK+AKP E ++ S WG GRPGWHIECS MAS
Sbjct: 188 KYGKLVNTVPSATAEPGDSDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMAS 247
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRRLRA 475
FG +D+HTGGIDL FPHHENE AQS FH QW NY+LH+GHL +GT+
Sbjct: 248 EVFGSHLDIHTGGIDLAFPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTEEKMSKSL 307
Query: 476 ARFIT----NLSGSTIGYTRDTC 494
+IT LSG ++ D+C
Sbjct: 308 KNYITIKDCRLSGRSL---LDSC 327
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 65/102 (63%)
Query: 22 WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
W P G DTG++++N +T K P I+ + + WY+CGPTVYD H+GHA V+ DIIR
Sbjct: 27 WQRPQGQDTGVQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIR 86
Query: 82 RILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
RIL F + ++ S+TD+DDKII +AN + ++A +
Sbjct: 87 RILTRVFGCNVVMAMSITDVDDKIIKRANEMNVTPASLASLF 128
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + ++ S+TD+DDKII +AN + ++A +
Sbjct: 74 GHACSYVRFDIIRRILTRVFGCNVVMAMSITDVDDKIIKRANEMNVTPASLASLF 128
>gi|90077312|dbj|BAE88336.1| unnamed protein product [Macaca fascicularis]
Length = 451
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 105/167 (62%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 30 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIARGHAYSTAKGNVYFDLKSRGD 89
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G KR DFALWK+AKP E ++ S WG GRPGWHIECSA+AS
Sbjct: 90 KYGKLVGVVPGPVGEPADSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIAS 149
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL
Sbjct: 150 MVFGSQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGHL 196
>gi|452841755|gb|EME43692.1| hypothetical protein DOTSEDRAFT_45533 [Dothistroma septosporum
NZE10]
Length = 796
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 114/186 (61%), Gaps = 23/186 (12%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RYE +F+ M+ V P + TRV+E+ P I F++ + D AY ++ SVY+D +++
Sbjct: 241 RYEKRFFDDMDALNVRRPNKLTRVTEYGPQIVDFVKQIQDNGFAY-DNEGSVYYDTNAWQ 299
Query: 361 H----YFKLWGRNEN-------------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGK 403
Y KL N+N + K+S DFALWK+++PGEP +ES WG+
Sbjct: 300 KSGGFYAKLKPENKNDEELQAEGEGSLSTRKTGFKKSGADFALWKASRPGEPSWESPWGE 359
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF-----HNQSQWVNYW 458
GRPGWHIECSAMAS G Q D+H+GGIDL FPHH+NE AQS A+ + QWVNY+
Sbjct: 360 GRPGWHIECSAMASDILGKQFDIHSGGIDLAFPHHDNEIAQSEAYWASCGKDSVQWVNYF 419
Query: 459 LHTGHL 464
LH GHL
Sbjct: 420 LHMGHL 425
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLK--WYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
+ +YN +T++K PF+ + K WYACGPTVYD H+GHA V DIIRRI+ YF
Sbjct: 25 LSVYNSLTRSKTPFVPIDPEGKKVGWYACGPTVYDDAHLGHARNYVSQDIIRRIMTDYFK 84
Query: 90 IHSIVISSVTDIDDKIINKA 109
+ ++TD+DDKII A
Sbjct: 85 FKVDFVMNITDVDDKIIKAA 104
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 184
GHA V DIIRRI+ YF + ++TD+DDKII A
Sbjct: 64 GHARNYVSQDIIRRIMTDYFKFKVDFVMNITDVDDKIIKAA 104
>gi|355754809|gb|EHH58710.1| Putative cysteinyl-tRNA synthetase, mitochondrial, partial [Macaca
fascicularis]
Length = 517
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 105/167 (62%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 96 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIARGHAYSTAKGNVYFDLKSRGD 155
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G KR DFALWK+AKP E ++ S WG GRPGWHIECSA+AS
Sbjct: 156 KYGKLVGVVPGPVGEPADSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIAS 215
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL
Sbjct: 216 MVFGSQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGHL 262
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 79/145 (54%), Gaps = 19/145 (13%)
Query: 29 DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
+TG+++YN +T K P I+ + WY+CGPTVYD H+GHA V+ DIIRRIL F
Sbjct: 2 ETGVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVF 61
Query: 89 HIHSIVISSVTDIDDKIINKANSL-----------KEDYK--TVAKRYFLPLIFKILHQK 135
+ +++ +TD+DDKII +AN + +ED+K A + P ++ + +
Sbjct: 62 GCNIVMVMGITDVDDKIIKRANEMNISPASLASLYEEDFKQDMAALKVLPPTVYLRVTEN 121
Query: 136 V------VGSIPTRGHAVCNVKLDI 154
+ + I RGHA K ++
Sbjct: 122 IPQIISFIEGIIARGHAYSTAKGNV 146
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + +++ +TD+DDKII +AN + ++A Y
Sbjct: 42 GHACSYVRFDIIRRILTKVFGCNIVMVMGITDVDDKIIKRANEMNISPASLASLY 96
>gi|355701102|gb|EHH29123.1| Putative cysteinyl-tRNA synthetase, mitochondrial, partial [Macaca
mulatta]
Length = 510
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 105/167 (62%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 89 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIARGHAYSTAKGNVYFDLKSRGD 148
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G KR DFALWK+AKP E ++ S WG GRPGWHIECSA+AS
Sbjct: 149 KYGKLVGVVPGPVGEPADSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIAS 208
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL
Sbjct: 209 MVFGSQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGHL 255
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 19/139 (13%)
Query: 35 YNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIV 94
YN +T K P I+ + WY+CGPTVYD H+GHA V+ DIIRRIL F + ++
Sbjct: 1 YNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVFGCNIVM 60
Query: 95 ISSVTDIDDKIINKANSL-----------KEDYK--TVAKRYFLPLIFKILHQKV----- 136
+ +TD+DDKII +AN + +ED+K A + P ++ + + +
Sbjct: 61 VMGITDVDDKIIKRANEMNISPASLASLYEEDFKQDMAALKVLPPTVYLRVTENIPQIIS 120
Query: 137 -VGSIPTRGHAVCNVKLDI 154
+ I RGHA K ++
Sbjct: 121 FIEGIIARGHAYSTAKGNV 139
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + +++ +TD+DDKII +AN + ++A Y
Sbjct: 35 GHACSYVRFDIIRRILTKVFGCNIVMVMGITDVDDKIIKRANEMNISPASLASLY 89
>gi|333980492|ref|YP_004518437.1| cysteinyl-tRNA synthetase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823973|gb|AEG16636.1| cysteinyl-tRNA synthetase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 483
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 103/171 (60%), Gaps = 9/171 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y EY+ E V P RVSE +P I I TL++ K AY+ D VYFD+ +FP
Sbjct: 90 KYIDEYYRDAEALNVRPADVHPRVSEHLPEIIDLISTLIEKKAAYV-VDGDVYFDISAFP 148
Query: 361 HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR Q K+ P DFALWK+AKPGEP ++S WGKGRPGWHIECS
Sbjct: 149 EYGKLSGRTLEEMQAGARVEVDPRKKHPMDFALWKAAKPGEPAWDSPWGKGRPGWHIECS 208
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AMA + G D+H GG DL FPHHENE AQ+ A + +V YW+H G +
Sbjct: 209 AMALKYLGNNFDIHGGGFDLVFPHHENEIAQAEAATGRP-FVRYWMHNGFI 258
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++IYN +T+ K FI ++ + Y CGPT Y+ H+G+A V D +RR + Y
Sbjct: 1 MEIYNTLTRRKEKFIPRHPGRVDMYVCGPTTYNFIHLGNARPLVFFDTVRRYFQ-YRGYR 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TDIDDKIIN+A D +A++Y
Sbjct: 60 VKYVQNFTDIDDKIINRAREEGVDALALARKY 91
>gi|298711628|emb|CBJ32684.1| Cysteinyl-tRNA Synthetase [Ectocarpus siliculosus]
Length = 663
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/184 (48%), Positives = 113/184 (61%), Gaps = 22/184 (11%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E +Y + M GV PT TRVSEFIP + +IQ ++D AY S+ SVYF+V SF
Sbjct: 131 FEEDYMQDMALLGVRAPTVVTRVSEFIPEVVEYIQGIIDNGYAYE-SNGSVYFNVQSFEG 189
Query: 362 -----YFKLW----GRNENITQH--------AVKRSPFDFALWKSAKPGEPWYESAWGKG 404
Y KL G E + + KRS DFALWK ++ GEP + S WG G
Sbjct: 190 KKGHAYAKLLPEGVGNGELMAEGEGALSLGAGDKRSSGDFALWKRSREGEPSWPSPWGDG 249
Query: 405 RPGWHIECSAMASHFF----GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLH 460
RPGWHIECS MAS F G +D+H+GG+DLKFPHH+NE AQ+ A ++ QWVNY+LH
Sbjct: 250 RPGWHIECSVMASATFEGMGDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLH 309
Query: 461 TGHL 464
TGHL
Sbjct: 310 TGHL 313
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 60/92 (65%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K++N +T+TK F+ ++ N + WY CGPTVY H+GHA + DI+RR++ +F
Sbjct: 40 LKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYD 99
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ ++TDIDDKII +AN ++Y+ +A +
Sbjct: 100 VSLCMNITDIDDKIITRANEGGQNYRELAAHF 131
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA + DI+RR++ +F + ++TDIDDKII +AN ++Y+ +A +
Sbjct: 77 GHARTYLHFDILRRVMTDFFGYDVSLCMNITDIDDKIITRANEGGQNYRELAAHF 131
>gi|380794365|gb|AFE69058.1| putative cysteinyl-tRNA synthetase, mitochondrial, partial [Macaca
mulatta]
Length = 526
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 105/167 (62%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 105 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIARGHAYSTAKGNVYFDLKSRGD 164
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G KR DFALWK+AKP E ++ S WG GRPGWHIECSA+AS
Sbjct: 165 KYGKLVGVVPGPVGEPADSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIAS 224
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL
Sbjct: 225 MVFGSQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGHL 271
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 19/152 (12%)
Query: 22 WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
W P+G +TG+++YN +T K P I+ + WY+CGPTVYD H+GHA V+ DIIR
Sbjct: 4 WLQPTGRETGVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIR 63
Query: 82 RILEHYFHIHSIVISSVTDIDDKIINKANSL-----------KEDYK--TVAKRYFLPLI 128
RIL F + +++ +TD+DDKII +AN + +ED+K A + P +
Sbjct: 64 RILTKVFGCNIVMVMGITDVDDKIIKRANEMNISPASLASLYEEDFKQDMAALKVLPPTV 123
Query: 129 FKILHQKV------VGSIPTRGHAVCNVKLDI 154
+ + + + + I RGHA K ++
Sbjct: 124 YLRVTENIPQIISFIEGIIARGHAYSTAKGNV 155
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + +++ +TD+DDKII +AN + ++A Y
Sbjct: 51 GHACSYVRFDIIRRILTKVFGCNIVMVMGITDVDDKIIKRANEMNISPASLASLY 105
>gi|282857764|ref|ZP_06266973.1| cysteine--tRNA ligase [Pyramidobacter piscolens W5455]
gi|282584434|gb|EFB89793.1| cysteine--tRNA ligase [Pyramidobacter piscolens W5455]
Length = 474
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 107/167 (64%), Gaps = 9/167 (5%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
+Y+E + G+ + R +E+IP I + IQ ++D AY+ +D +V+FDV SFP Y K
Sbjct: 96 DYYEDADALGIKRASFYPRATEYIPKIIAMIQRIIDNGHAYV-ADGTVFFDVKSFPAYGK 154
Query: 365 LWGRNENITQHA-------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N + Q VKRSP DF LWK KPGEP +ES WG GRPGWHIECSAM++
Sbjct: 155 LSHQNLDDLQSGARIEVDDVKRSPLDFVLWKPQKPGEPAWESPWGLGRPGWHIECSAMST 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G VD+HTGGIDL FPHHENE AQ+ A + +V YWLH ++
Sbjct: 215 DLLGDTVDIHTGGIDLVFPHHENEIAQTEAATGKP-FVKYWLHNEYI 260
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+ +YN +T+ K PF+ ++ + +Y+CGPTVYD HIG+A + D++RR LE F
Sbjct: 2 ALALYNDLTRKKEPFVPLHEGKVAFYSCGPTVYDYFHIGNARPFIVFDVLRRYLE--FRG 59
Query: 91 HSIV-ISSVTDIDDKIINKAN 110
+ + + + TDIDDK+I +AN
Sbjct: 60 YEVTFVQNFTDIDDKMIARAN 80
>gi|242050146|ref|XP_002462817.1| hypothetical protein SORBIDRAFT_02g032450 [Sorghum bicolor]
gi|241926194|gb|EER99338.1| hypothetical protein SORBIDRAFT_02g032450 [Sorghum bicolor]
Length = 571
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 108/175 (61%), Gaps = 11/175 (6%)
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI-GSDHSVYF 354
F + R+ ++ M LPP+ RVS+ I I + I+ +LD AY+ G D VYF
Sbjct: 159 FSLSKRFSDDFLSDMANLQCLPPSVEPRVSDHIHEIINMIKQILDNSCAYVVGGD--VYF 216
Query: 355 DVDSFPHYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPG 407
V++FP Y +L GR E + KR+P DFALWK+AK GEPW++S WG GRPG
Sbjct: 217 SVENFPEYGELSGRKLDDNRAGERVAVDERKRNPADFALWKAAKDGEPWWDSPWGPGRPG 276
Query: 408 WHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
WHIECSAM++H+ G D+H GG DL FPHHENE AQS A S +NYW+H G
Sbjct: 277 WHIECSAMSAHYLGHSFDIHGGGEDLIFPHHENEIAQSRAACCDST-INYWIHNG 330
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKN-HLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+ +YN ++ K F ++ + Y CG T YD HIGHA V D++ R L Y
Sbjct: 74 LHLYNTKSRKKEQFRPRDPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLYRYL-RYLDY 132
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TDIDDKII +AN L ED +++KR+
Sbjct: 133 EVRYVRNFTDIDDKIIARANQLGEDPFSLSKRF 165
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V D++ R L Y + + TDIDDKII +AN L ED +++KR+
Sbjct: 112 GHARAYVAFDVLYRYL-RYLDYEVRYVRNFTDIDDKIIARANQLGEDPFSLSKRF 165
>gi|281202238|gb|EFA76443.1| cysteinyl-tRNA synthetase [Polysphondylium pallidum PN500]
Length = 633
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 122/195 (62%), Gaps = 17/195 (8%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
++E +F+ ++ VLPP TRV+E++P I +F++ ++ AY S+ SVYFD +++
Sbjct: 121 KWENSFFDDLKALNVLPPDALTRVTEYVPEIVTFVEKIIANGFAY-ESNGSVYFDTEAYM 179
Query: 361 ---HYFKLWGR---NENITQHAV--------KRSPFDFALWKSAKPGEPWYESAWGKGRP 406
Y KL NE + KR+ DFALWK +K GEP + S WG+GRP
Sbjct: 180 KVHEYGKLEPSSVGNEKLNSEGEGALSAGSDKRNNNDFALWKKSKEGEPKWNSPWGEGRP 239
Query: 407 GWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRG 466
GWHIECSAMAS G +D+H+GG DLKFPHH+NE AQS A + QW+NY++H+GHL
Sbjct: 240 GWHIECSAMASDILGANIDIHSGGEDLKFPHHDNEIAQSEAHYGCKQWINYFIHSGHLL- 298
Query: 467 TDGTRRLRAAR-FIT 480
DG + ++ + FIT
Sbjct: 299 IDGLKMSKSLKNFIT 313
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 18 ESPKWSLPSGYDTGIKIYNPITKTKVPFI-IQNKNHLKWYACGPTVYDSPHIGHAVCNVK 76
E P+W P+G + ++IYN +T +KVPF I + WY CGPTVYD+ H+GHA +
Sbjct: 16 EQPEWFKPAGQPSELQIYNSLTSSKVPFTPISGGKSVSWYICGPTVYDASHMGHARSYIS 75
Query: 77 LDIIRRILEHYF 88
DIIRRI++ Y
Sbjct: 76 FDIIRRIMKDYL 87
>gi|145330001|ref|NP_001077986.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|330253409|gb|AEC08503.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 401
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 102/160 (63%), Gaps = 9/160 (5%)
Query: 310 MEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGR- 368
ME+ L P+ RVS+ IP I I+ +LD AY D +YF VD FP Y KL GR
Sbjct: 1 MEQLQCLDPSVQPRVSDHIPQIIDLIKQILDNGYAY-KVDGDIYFSVDKFPTYGKLSGRK 59
Query: 369 ------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGG 422
E + K+ P DFALWK+AK GEP++ES WG+GRPGWHIECSAM++ + G
Sbjct: 60 LEDNRAGERVAVDTRKKHPADFALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGY 119
Query: 423 QVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
D+H GG+DL FPHHENE AQSCA + S ++YW+H G
Sbjct: 120 SFDIHGGGMDLVFPHHENEIAQSCAACDSSN-ISYWIHNG 158
>gi|46123171|ref|XP_386139.1| hypothetical protein FG05963.1 [Gibberella zeae PH-1]
Length = 800
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 132/366 (36%), Positives = 175/366 (47%), Gaps = 54/366 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRIL HYF + ++TDIDDKII KA + E K +K
Sbjct: 42 GHARNYVSTDIIRRILMHYFGFEVKFVMNITDIDDKIIIKARRQRLLELEKNKNYSKDEL 101
Query: 200 LRLIFKILHQKVVRKLAIDLKKAK-VDSGPVLTKCDEFRDELLALGVQIKDQK------- 251
L L + LK + +D+ + + +LA G + K
Sbjct: 102 RDLALAAFQAYAKSSLPLLLKDGEDIDATNYPQRREAGYGHVLAGGTISGEGKPGDDEAK 161
Query: 252 --------CEATWQFKDGKVFSDRVFISLP----LYLILIQVSLLGPLTLRTVVFEFLFN 299
A G++F I LP LY I T T E LF
Sbjct: 162 VKMHLSNMTSAAEAIASGEIFPGTDEILLPYLDSLYKETIDTRDQTMFTDLTQSMEKLFT 221
Query: 300 FRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF 359
+ M+ VL P TRV+E++P I F++T++D AY +D SVYFD+ +F
Sbjct: 222 --------DDMDALNVLRPDVITRVTEYVPQIADFVKTIVDKGFAY-EADGSVYFDITAF 272
Query: 360 PH----YFKLW--GRNENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWGK 403
Y +L RN+ Q + K++P DFALWK +K GEP++ S WG
Sbjct: 273 EKAGNTYARLRPDNRNDKSLQEEGEGSLSKGLSGKKNPGDFALWKKSKAGEPFWSSPWGD 332
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF---HNQSQ--WVNYW 458
GRPGWHIECS MA G +D+H+GGIDL FPHH+NE AQS A+ H + + WVNY+
Sbjct: 333 GRPGWHIECSVMAGAVLGSNMDIHSGGIDLAFPHHDNELAQSEAYFCEHGKGEHTWVNYF 392
Query: 459 LHTGHL 464
LH GHL
Sbjct: 393 LHMGHL 398
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 32 IKIYNPIT-KTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
+K+YN + VPF+ K + WYACGPTVYD H+GHA V DIIRRIL HYF
Sbjct: 4 LKLYNSLKPGAPVPFVPIEKGKVSWYACGPTVYDKSHLGHARNYVSTDIIRRILMHYF 61
>gi|164658560|ref|XP_001730405.1| hypothetical protein MGL_2200 [Malassezia globosa CBS 7966]
gi|159104301|gb|EDP43191.1| hypothetical protein MGL_2200 [Malassezia globosa CBS 7966]
Length = 823
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 112/207 (54%), Gaps = 35/207 (16%)
Query: 292 VVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI----G 347
VF L + +E +F M++ V PPT TRVSE++P I FI+ +L AY+
Sbjct: 247 AVFRKLAAY-WEAAFFHDMKRLHVEPPTILTRVSEYVPEIVQFIERILQNGFAYVDDASA 305
Query: 348 SDHSVYFDVDSF------------------PHYF------------KLWGRNENITQHAV 377
+V+F F H+F +L E
Sbjct: 306 ESKNVWFATSQFDGSACVAGALAENQPEAREHHFYAKLAPWSKGNRELLEEGEGALAAKG 365
Query: 378 KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPH 437
KR+ DFALWK AKPGEP + S WG GRPGWHIECS MAS G Q+D+H+GGIDL FPH
Sbjct: 366 KRNAADFALWKRAKPGEPAWPSPWGPGRPGWHIECSVMASKVLGSQIDIHSGGIDLMFPH 425
Query: 438 HENEEAQSCAFHNQSQWVNYWLHTGHL 464
H+NE AQS AFH QW+NY+LHTGHL
Sbjct: 426 HDNELAQSEAFHGCPQWINYFLHTGHL 452
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 71/144 (49%), Gaps = 24/144 (16%)
Query: 22 WSLPSGYDTG--IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDI 79
W P + + +YN +T++K F+ + + WY CGPTVYD+ H+GHA V D+
Sbjct: 12 WKAPEAEEKAPELHVYNSLTRSKERFVPKRGRLVTWYNCGPTVYDASHMGHARNYVTQDV 71
Query: 80 IRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGS 139
IRRI+ Y + +VTDIDDKII + A++ FL F+ H
Sbjct: 72 IRRIMRDYLGYDVNFVMNVTDIDDKIIMR-----------ARQEFLLQQFRSQH------ 114
Query: 140 IPTRGHAVCNVKLDIIRRILEHYF 163
P HA+ LD ++ HYF
Sbjct: 115 -PHLTHAL----LDAVQAAWNHYF 133
>gi|308234253|ref|ZP_07664990.1| cysteinyl-tRNA synthetase [Atopobium vaginae DSM 15829]
gi|328943535|ref|ZP_08241000.1| cysteine--tRNA ligase [Atopobium vaginae DSM 15829]
gi|327491504|gb|EGF23278.1| cysteine--tRNA ligase [Atopobium vaginae DSM 15829]
Length = 490
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 103/178 (57%), Gaps = 11/178 (6%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y + E M +FG+L P R + I H+Q IQ L+D AY+ + VYF V S +
Sbjct: 91 YSCAFIEQMHRFGILDPDIRPRATAEIEHMQVMIQILIDKGHAYVADNGDVYFSVRSDHN 150
Query: 362 YFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
Y + GR E I + KR PFDF LWK+AKP EP ++S WGKGRPGWH EC A
Sbjct: 151 YGVVSGRQLDDMRAGERIEVNDAKRDPFDFVLWKAAKPSEPSWDSPWGKGRPGWHTECCA 210
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQ-SCAFHNQSQWVNYWLHTGHLRGTDGTR 471
M + G +D+H GG DL FPHHENE AQ SCA+ NYW+H G LR DG +
Sbjct: 211 MIHRYLGTPIDIHGGGQDLMFPHHENENAQASCAW--DKPLANYWMHAGMLR-VDGEK 265
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN T K FI N ++ Y CGPTVYD HIG+A + DIIRR L+ Y +
Sbjct: 3 IYNSKTHKKEEFIPLEPNRVRMYVCGPTVYDQIHIGNARTFLSFDIIRRYLQ-YKGFAVV 61
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKI 131
++TD+DDKIIN+AN +AK Y I ++
Sbjct: 62 FAQNLTDVDDKIINRANEQGISADELAKTYSCAFIEQM 99
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 71/171 (41%), Gaps = 28/171 (16%)
Query: 117 KTVAKRYFLPLIFKILHQKVVGSIPTR------GHAVCNVKLDIIRRILEHYFHIHSIVI 170
KT K F+PL + V G PT G+A + DIIRR L+ Y +
Sbjct: 7 KTHKKEEFIPLEPNRVRMYVCG--PTVYDQIHIGNARTFLSFDIIRRYLQ-YKGFAVVFA 63
Query: 171 SSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI-----FKIL-------------HQKVV 212
++TD+DDKIIN+AN +AK Y I F IL H +V+
Sbjct: 64 QNLTDVDDKIINRANEQGISADELAKTYSCAFIEQMHRFGILDPDIRPRATAEIEHMQVM 123
Query: 213 RKLAIDLKKAKV-DSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGK 262
++ ID A V D+G V + + G Q+ D + + D K
Sbjct: 124 IQILIDKGHAYVADNGDVYFSVRSDHNYGVVSGRQLDDMRAGERIEVNDAK 174
>gi|303286934|ref|XP_003062756.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455392|gb|EEH52695.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 724
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 118/200 (59%), Gaps = 22/200 (11%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+E E+ M V+ P TRVSE++ I S+IQ ++D AY S+ SVYFDV +F
Sbjct: 173 RFEDEFMGDMASLNVMRPDALTRVSEYVDKIVSYIQRIVDRGFAY-ESNGSVYFDVPTFE 231
Query: 361 H-----YFKLW--------------GRNENITQHAVKRSPFDFALWKSAKPGEPWYESAW 401
Y KL G + K+ DF LWK++KPGEP + S W
Sbjct: 232 KDANHKYAKLNKAALAEDEVEAAMDGEGALAADASEKKDAHDFVLWKASKPGEPSWASPW 291
Query: 402 GKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHT 461
G+GRPGWHIECSAM S G VD++ GGIDL FPHHEN+ AQS AF++ QWVNY++H+
Sbjct: 292 GEGRPGWHIECSAMCSDVLGEAVDINGGGIDLNFPHHENQLAQSEAFYDVKQWVNYFVHS 351
Query: 462 GHLRGTDGTRRLRAAR-FIT 480
GHL DG + ++ + FIT
Sbjct: 352 GHLH-IDGLKMSKSLKNFIT 370
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%)
Query: 33 KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHS 92
++ N TKTK PF+ + N + WY CGPTVYDS H+GHA V D++RR++ YF
Sbjct: 11 RLMNTFTKTKTPFVPLDGNRVGWYICGPTVYDSAHMGHARNYVNFDVLRRVVTEYFRYDV 70
Query: 93 IVISSVTDIDDKIINKANSLKED 115
+ +VTDIDDKI+ +A+ + +
Sbjct: 71 RFVMNVTDIDDKIVMRAHQRRSE 93
>gi|383421579|gb|AFH34003.1| putative cysteinyl-tRNA synthetase, mitochondrial precursor [Macaca
mulatta]
Length = 563
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 105/167 (62%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 142 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIARGHAYSTAKGNVYFDLKSRGD 201
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G KR DFALWK+AKP E ++ S WG GRPGWHIECSA+AS
Sbjct: 202 KYGKLVGVVPGPVGEPADSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIAS 261
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL
Sbjct: 262 MVFGSQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGHL 308
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 19/160 (11%)
Query: 14 ATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
A+ W P+G +TG+++YN +T K P I+ + WY+CGPTVYD H+GHA
Sbjct: 33 ASGGRGRAWLQPTGRETGVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACS 92
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL-----------KEDYK--TVA 120
V+ DIIRRIL F + +++ +TD+DDKII +AN + +ED+K A
Sbjct: 93 YVRFDIIRRILTKVFGCNIVMVMGITDVDDKIIKRANEMNISPASLASLYEEDFKQDMAA 152
Query: 121 KRYFLPLIFKILHQKV------VGSIPTRGHAVCNVKLDI 154
+ P ++ + + + + I RGHA K ++
Sbjct: 153 LKVLPPTVYLRVTENIPQIISFIEGIIARGHAYSTAKGNV 192
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + +++ +TD+DDKII +AN + ++A Y
Sbjct: 88 GHACSYVRFDIIRRILTKVFGCNIVMVMGITDVDDKIIKRANEMNISPASLASLY 142
>gi|358388430|gb|EHK26023.1| hypothetical protein TRIVIDRAFT_86126 [Trichoderma virens Gv29-8]
Length = 799
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 173/363 (47%), Gaps = 48/363 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRIL+H+F + ++TDIDDKII KA + E K K
Sbjct: 42 GHARNYVSTDIIRRILQHFFGFKLNFVMNITDIDDKIIIKARRQRLLDIEKGKNYTKEEL 101
Query: 200 LRLIFKILHQKVVRKLAI-----------------DLKKAKVDSGPVLTKCDEFRDELLA 242
+L L + D KV +G LT + D
Sbjct: 102 AKLTRAAFKAYAASSLPLLVENGGDLDETTYTAQRDASYGKVLTGGTLTGEGKPGDAEAK 161
Query: 243 LGVQIKDQKCEATWQFKDGKVFSDRVFISLPLYLILIQVSLLGPLTLRTVVFEFLFNFRY 302
+ + I + A K+G +F I LP L + ++ T +F L
Sbjct: 162 IKMHISNMDAAAE-ALKNGSIFPGADEIFLPYLDTLYKETVD---TRDQTMFTDLTKSME 217
Query: 303 ELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHY 362
+L + M+ VL P TRV+E++P I F++ ++D AY S+ SVYFD+ +F
Sbjct: 218 DL-FMADMDALNVLRPDHITRVTEYVPQIAKFVEKIVDKGFAY-ESEGSVYFDIAAFEKA 275
Query: 363 FKLWGR------NENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWGKGRP 406
+ R N+ Q K+ DFALWK +K GEP++ S WG GRP
Sbjct: 276 GNSYARLRPESKNDKALQEEGEGSLSKNLGGKKGAGDFALWKKSKAGEPFWPSPWGDGRP 335
Query: 407 GWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF---HNQSQ--WVNYWLHT 461
GWHIECS MAS G Q+D+H+GGIDL FPHH+NE AQS A+ H + + WV Y+LH
Sbjct: 336 GWHIECSVMASDILGSQMDIHSGGIDLAFPHHDNELAQSEAYFCEHGKGEHTWVRYFLHM 395
Query: 462 GHL 464
GHL
Sbjct: 396 GHL 398
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 32 IKIYNPIT-KTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
+K++N + VPF+ + WYACGPTVYD H+GHA V DIIRRIL+H+F
Sbjct: 4 LKLHNSLKPGAPVPFVPIRSGEVSWYACGPTVYDKSHLGHARNYVSTDIIRRILQHFF 61
>gi|26334827|dbj|BAC31114.1| unnamed protein product [Mus musculus]
gi|148690121|gb|EDL22068.1| mCG11180, isoform CRA_d [Mus musculus]
Length = 335
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 113/185 (61%), Gaps = 6/185 (3%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
+E E+ + M VLPPT RV+E IP I +FI+ ++ AY + SVYFD+ +
Sbjct: 128 FEEEFKQDMAALKVLPPTVYLRVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGD 187
Query: 361 HYFKLWGRNENITQH---AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL + T + KR DFALWK+AKP E ++ S WG GRPGWHIECS MAS
Sbjct: 188 KYGKLVNTVPSATAEPGDSDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMAS 247
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRRLRA 475
FG +D+HTGGIDL FPHHENE AQS FH QW NY+LH+GHL +GT+
Sbjct: 248 EVFGSHLDIHTGGIDLAFPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTEEKMSKSL 307
Query: 476 ARFIT 480
+IT
Sbjct: 308 KNYIT 312
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 65/102 (63%)
Query: 22 WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
W P G DTG++++N +T K P I+ + + WY+CGPTVYD H+GHA V+ DIIR
Sbjct: 27 WQRPQGQDTGVQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIR 86
Query: 82 RILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
RIL F + ++ S+TD+DDKII +AN + ++A +
Sbjct: 87 RILTRVFGCNVVMAMSITDVDDKIIKRANEMNVTPASLASLF 128
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + ++ S+TD+DDKII +AN + ++A +
Sbjct: 74 GHACSYVRFDIIRRILTRVFGCNVVMAMSITDVDDKIIKRANEMNVTPASLASLF 128
>gi|297826557|ref|XP_002881161.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327000|gb|EFH57420.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 562
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 105/169 (62%), Gaps = 9/169 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E+ ME+ L P+ VS+ IP I I+ +LD AY D +YF VD FP
Sbjct: 154 RFCEEFKRDMEQLQCLDPSVQPLVSDHIPQIVDLIKQILDNGYAY-KVDGDIYFSVDKFP 212
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR E + K+ P DFALWK+AK GEP++ES WG+GRPGWHIECS
Sbjct: 213 TYGKLSGRKLEDNRAGERVAVDTRKKHPADFALWKTAKEGEPFWESPWGRGRPGWHIECS 272
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM++ + G D+H GG+DL FPHHENE AQSCA + S ++YW+H G
Sbjct: 273 AMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACDSSN-ISYWIHNG 320
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
++N +++ K F + + + Y CG T YD HIGHA V D++ R L+H + S
Sbjct: 67 LHNTMSRKKELFKPKIEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGYEVSY 126
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRY 123
V + TD+DDKII +AN L ED ++++R+
Sbjct: 127 V-RNFTDVDDKIIARANELGEDPISLSRRF 155
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V D++ R L+H + S V + TD+DDKII +AN L ED ++++R+
Sbjct: 102 GHARVYVTFDVLLRYLKHLGYEVSYV-RNFTDVDDKIIARANELGEDPISLSRRF 155
>gi|109121280|ref|XP_001083935.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial
isoform 3 [Macaca mulatta]
Length = 563
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 105/167 (62%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 142 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIARGHAYSTAKGNVYFDLKSRGD 201
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G KR DFALWK+AKP E ++ S WG GRPGWHIECSA+AS
Sbjct: 202 KYGKLVGVVPGPVGEPADSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIAS 261
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL
Sbjct: 262 MVFGSQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGHL 308
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 19/160 (11%)
Query: 14 ATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
A+ W P+G +TG+++YN +T K P I+ + WY+CGPTVYD H+GHA
Sbjct: 33 ASGGRGRAWLQPTGRETGVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACS 92
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL-----------KEDYK--TVA 120
V+ DIIRRIL F + +++ +TD+DDKII +AN + +ED+K A
Sbjct: 93 YVRFDIIRRILTKVFGCNIVMVMGITDVDDKIIKRANEMNISPASLASLYEEDFKQDMAA 152
Query: 121 KRYFLPLIFKILHQKV------VGSIPTRGHAVCNVKLDI 154
+ P ++ + + + + I RGHA K ++
Sbjct: 153 LKVLPPTVYLRVTENIPQIISFIEGIIARGHAYSTAKGNV 192
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + +++ +TD+DDKII +AN + ++A Y
Sbjct: 88 GHACSYVRFDIIRRILTKVFGCNIVMVMGITDVDDKIIKRANEMNISPASLASLY 142
>gi|13938199|gb|AAH07220.1| Cysteinyl-tRNA synthetase 2, mitochondrial (putative) [Homo
sapiens]
Length = 564
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 105/167 (62%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 143 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIARGNAYSTAKGNVYFDLKSRGD 202
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G KR DFALWK+AKP E ++ S WG GRPGWHIECSA+AS
Sbjct: 203 KYGKLVGVVPGPVGEPADSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIAS 262
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL
Sbjct: 263 MVFGSQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGHL 309
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 66/110 (60%)
Query: 14 ATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
A+ W P+G +TG+++YN +T K P I+ + WY+CGPTVYD H+GHA
Sbjct: 34 ASGGRGRAWLQPTGRETGVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACS 93
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
V+ DIIRRIL F +++ +TD+DDKII +AN + ++A Y
Sbjct: 94 YVRFDIIRRILTKVFGCSIVMVMGITDVDDKIIKRANEMNISPASLASLY 143
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F +++ +TD+DDKII +AN + ++A Y
Sbjct: 89 GHACSYVRFDIIRRILTKVFGCSIVMVMGITDVDDKIIKRANEMNISPASLASLY 143
>gi|13375695|ref|NP_078813.1| probable cysteine--tRNA ligase, mitochondrial [Homo sapiens]
gi|74761587|sp|Q9HA77.1|SYCM_HUMAN RecName: Full=Probable cysteine--tRNA ligase, mitochondrial;
AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS;
Flags: Precursor
gi|10433519|dbj|BAB13978.1| unnamed protein product [Homo sapiens]
gi|119629531|gb|EAX09126.1| hypothetical protein FLJ12118 [Homo sapiens]
Length = 564
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 105/167 (62%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 143 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIARGNAYSTAKGNVYFDLKSRGD 202
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G KR DFALWK+AKP E ++ S WG GRPGWHIECSA+AS
Sbjct: 203 KYGKLVGVVPGPVGEPADSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIAS 262
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL
Sbjct: 263 MVFGSQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGHL 309
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 66/110 (60%)
Query: 14 ATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
A+ W P+G +TG+++YN +T K P I+ + WY+CGPTVYD H+GHA
Sbjct: 34 ASGGRGRAWLQPTGRETGVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACS 93
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
V+ DIIRRIL F +++ +TD+DDKII +AN + ++A Y
Sbjct: 94 YVRFDIIRRILTKVFGCSIVMVMGITDVDDKIIKRANEMNISPASLASLY 143
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F +++ +TD+DDKII +AN + ++A Y
Sbjct: 89 GHACSYVRFDIIRRILTKVFGCSIVMVMGITDVDDKIIKRANEMNISPASLASLY 143
>gi|348026620|ref|YP_004766425.1| cysteinyl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
gi|341822674|emb|CCC73598.1| cysteinyl-tRNA synthetase [Megasphaera elsdenii DSM 20460]
Length = 481
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 102/169 (60%), Gaps = 8/169 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY YFE M+K + + RVSE + I +QTL+D AY+ DH VY+ V+ F
Sbjct: 93 RYIASYFEVMDKLHIRRADKYPRVSEHMDEIIHMVQTLIDKGYAYV-IDHDVYYSVEKFN 151
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L GR+ I K +P DFALWK AKPGEP ++S WGKGRPGWHIECS
Sbjct: 152 DYGELSGRSLDDMMAGARIEVDDRKHNPMDFALWKGAKPGEPSWDSPWGKGRPGWHIECS 211
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM++ + G D H GG DL FPHHENE AQS AF + V YWLH G
Sbjct: 212 AMSNKYLGDTFDFHGGGSDLIFPHHENEIAQSEAFTGKKPMVKYWLHNG 260
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEH--YFH 89
+K+YN +T+ K F+ +K Y CG T Y+ H+G+A V D+I+R LEH Y
Sbjct: 4 LKVYNTLTRKKETFVPVTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLEHLGYEV 63
Query: 90 IHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
H I + TD+DDKIIN AN + T++ RY
Sbjct: 64 TH---IQNFTDVDDKIINAANGEGVTWDTISNRY 94
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPTR----GHAVCNVKLDIIRRILEH--YFHIHSIVIS 171
T K F+P+ + V G P G+A V D+I+R LEH Y H I
Sbjct: 11 TRKKETFVPVTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLEHLGYEVTH---IQ 67
Query: 172 SVTDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQKVVRK 214
+ TD+DDKIIN AN + T++ RY F+++ + +R+
Sbjct: 68 NFTDVDDKIINAANGEGVTWDTISNRYIASY-FEVMDKLHIRR 109
>gi|74317920|ref|YP_315660.1| cysteinyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
gi|109894959|sp|Q3SHN1.1|SYC_THIDA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|74057415|gb|AAZ97855.1| Cysteinyl-tRNA synthetase, class Ia [Thiobacillus denitrificans
ATCC 25259]
Length = 454
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 102/172 (59%), Gaps = 8/172 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E E GVLPP R + ++ + + I L+D AY + VY+ V FP
Sbjct: 91 RFIAEMHEDERALGVLPPDHEPRATAYVAQMLALIAQLVDRGLAYAAPNADVYYSVRGFP 150
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L G++ E + KR P DF LWK+AKPGEP +ES WG+GRPGWHIECS
Sbjct: 151 AYGRLSGKSLDELRAGERVEVDPNKRDPMDFVLWKAAKPGEPAWESPWGQGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
AM++ G D+H GG DL+FPHHENE AQS H + +VNYWLH G +R
Sbjct: 211 AMSAELLGQHFDIHGGGQDLQFPHHENEIAQSEGAHGCT-FVNYWLHNGFVR 261
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ I N +T+TK F+ + ++ Y CG TVYD H+GHA V D++ R L +
Sbjct: 2 LHITNSLTRTKEEFVPLSPGRVRMYVCGMTVYDLCHLGHARVFVVFDMVTRWLRASGYAV 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A+ KE + +R+ +
Sbjct: 62 EYV-RNITDIDDKIIKRAHENKETPAALTERFIAEM 96
>gi|348688693|gb|EGZ28507.1| hypothetical protein PHYSODRAFT_552257 [Phytophthora sojae]
Length = 690
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 117/184 (63%), Gaps = 22/184 (11%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E + + M + PT TRVSE++P + F++ ++ AY S+ SVYFD +F
Sbjct: 162 WEKSFLDDMAALNIKTPTVITRVSEYVPEVVEFVEGIIKNGFAY-ESNGSVYFDTAAFGR 220
Query: 362 Y-FKLWGR--NENITQHAV--------------KRSPFDFALWKSAKPGEPWYESAWGKG 404
K +G+ EN+ Q + KR+ DFALWK +K GEP++ S WG+G
Sbjct: 221 SKGKAYGKLLPENVGQSELLAEGEGALSAGQSDKRNASDFALWKKSKSGEPFWPSPWGEG 280
Query: 405 RPGWHIECSAMAS----HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLH 460
RPGWHIECSAMAS H GG++D+H+GGIDL+FPHH+NE AQS A+ + SQWVNY++H
Sbjct: 281 RPGWHIECSAMASDALKHLAGGKIDVHSGGIDLRFPHHDNEIAQSEAYFDFSQWVNYFVH 340
Query: 461 TGHL 464
TGHL
Sbjct: 341 TGHL 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+++YN +T+TK F+ + WY CGPTVYD H+GH D +RRILE YF +
Sbjct: 37 LRLYNSMTRTKNAFVPMQGKRVLWYMCGPTVYDQTHLGHGRTYTCFDYVRRILEDYFGLE 96
Query: 92 SIVISSVTDIDDKIINKA 109
++ ++TDIDDKII +A
Sbjct: 97 VELVMNITDIDDKIILRA 114
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 184
GH D +RRILE YF + ++ ++TDIDDKII +A
Sbjct: 74 GHGRTYTCFDYVRRILEDYFGLEVELVMNITDIDDKIILRA 114
>gi|254492695|ref|ZP_05105866.1| cysteinyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
gi|224462216|gb|EEF78494.1| cysteinyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
Length = 463
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 105/187 (56%), Gaps = 8/187 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E + + GVL P + +E +P I + ++TL+ AY + VY+DV F
Sbjct: 91 RFIAEMHQDADALGVLRPDLEPKATESMPEILAMVETLIGKGLAYKADNGDVYYDVSKFE 150
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR E I + K P DF LWK+AK GEP +ES WG GRPGWHIECS
Sbjct: 151 AYGKLSGRQVDDLRAGERIAVNEAKTDPLDFVLWKAAKEGEPAWESPWGMGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
AM++H G D+H GG DL+FPHHENE AQS H+ Q VNYW+H G +R D
Sbjct: 211 AMSAHCLGEHFDIHGGGQDLQFPHHENEIAQSEGAHD-CQSVNYWMHNGFVRIDDEKMSK 269
Query: 474 RAARFIT 480
F T
Sbjct: 270 SLGNFFT 276
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KI+N +++ K F + Y CG TVYD H+GHA V D++ R L +
Sbjct: 2 LKIHNSLSRQKETFKPITAGKVNMYVCGMTVYDLCHVGHARVMVVFDVVTRYL-RALGYN 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TDIDDKII +A E + + +R+ +
Sbjct: 61 VTYVRNITDIDDKIIKRAAENGETIQALTERFIAEM 96
>gi|237844837|ref|XP_002371716.1| cysteinyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
gi|211969380|gb|EEB04576.1| cysteinyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
Length = 766
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 112/180 (62%), Gaps = 18/180 (10%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E E+F M V PT TRVSE+IP + + I+ ++ Y S SVYFD +F
Sbjct: 200 WEKEFFNDMTALNVRLPTVVTRVSEYIPEVVALIERIVKNGYGY-ESQGSVYFDTQTFRK 258
Query: 362 YFK-LWGRNE--NITQHA--------------VKRSPFDFALWKSAKPGEPWYESAWGKG 404
K ++GR E +++ A KR P DFALWK AK GEP ++S WGKG
Sbjct: 259 NEKHVYGRMEPTSVSDEARVLEGEGELGLTSSEKRHPCDFALWKKAKEGEPSWDSPWGKG 318
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
RPGWHIECSAMA +D+H+GGIDL+FPHH+NE AQS A +++ QWVNY+LH+GHL
Sbjct: 319 RPGWHIECSAMADSILPFPLDIHSGGIDLRFPHHDNELAQSEAANDRPQWVNYFLHSGHL 378
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 7/117 (5%)
Query: 14 ATSCESPK----WSLPSGYD---TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSP 66
T+C P W +P+ TG+ + N + KV F+ Q N + WY CGPTVYD+
Sbjct: 84 GTACCGPAVGEHWEMPTKEGKLLTGLMVNNSMAGGKVEFVPQKGNRVCWYGCGPTVYDAS 143
Query: 67 HIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
H+GHA V D+IRRI+ Y + + ++TDIDDKII ++ D+ T+A+ +
Sbjct: 144 HMGHARTYVTFDVIRRIMSDYLNYDVTMCMNITDIDDKIIKRSTEQGVDFLTLARHW 200
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V D+IRRI+ Y + + ++TDIDDKII ++ D+ T+A R++ +
Sbjct: 146 GHARTYVTFDVIRRIMSDYLNYDVTMCMNITDIDDKIIKRSTEQGVDFLTLA-RHWEKEF 204
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLAL 243
F D+ V V+T+ E+ E++AL
Sbjct: 205 FN------------DMTALNVRLPTVVTRVSEYIPEVVAL 232
>gi|347540729|ref|YP_004848154.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
gi|345643907|dbj|BAK77740.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania sp. NH8B]
Length = 457
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 101/165 (61%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GV+ P R +E +P + + I+TL+ +AY + VY+ V FP Y KL G
Sbjct: 98 EDFDALGVIHPDFEPRATEHVPGMIALIETLIANGRAYPAPNGDVYYAVREFPGYGKLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR PFDF LWK+AKPGEP + S WG+GRPGWHIECS M+ H
Sbjct: 158 KSLEDLRAGERVEVDVNKRDPFDFVLWKAAKPGEPSWPSPWGEGRPGWHIECSVMSEHHL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS HN +VNYWLH G +R
Sbjct: 218 GEHFDIHGGGADLQFPHHENEIAQSEGAHNHD-FVNYWLHNGFIR 261
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ +YN +T+ K F Y CG TVYD H+GHA V D++ R L +
Sbjct: 2 LNLYNTLTRQKEVFKPITPGKASMYVCGMTVYDYCHLGHARMVVVFDMVARWLRATGYDL 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ V ++TDIDDKII +A E + + R+
Sbjct: 62 TYV-RNITDIDDKIIKRAAENGEPIQALTARF 92
>gi|224825711|ref|ZP_03698815.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
gi|224601935|gb|EEG08114.1| cysteinyl-tRNA synthetase [Pseudogulbenkiania ferrooxidans 2002]
Length = 457
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 101/165 (61%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GV+ P R +E +P + + I+TL+ +AY + VY+ V FP Y KL G
Sbjct: 98 EDFDALGVIHPDFEPRATEHVPGMIALIETLIANGRAYPAPNGDVYYAVREFPGYGKLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR PFDF LWK+AKPGEP + S WG+GRPGWHIECS M+ H
Sbjct: 158 KSLEDLRAGERVEVDVNKRDPFDFVLWKAAKPGEPSWPSPWGEGRPGWHIECSVMSEHHL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS HN +VNYWLH G +R
Sbjct: 218 GEHFDIHGGGADLQFPHHENEIAQSEGAHNHD-FVNYWLHNGFIR 261
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ +YN +T+ K F Y CG TVYD H+GHA V D++ R L +
Sbjct: 2 LNLYNTLTRQKEVFKPITPGKASMYVCGMTVYDYCHLGHARMVVVFDMVARWLRATGYDL 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ V ++TDIDDKII +A E + + R+
Sbjct: 62 TYV-RNITDIDDKIIKRAAENGEPIQALTARF 92
>gi|357159997|ref|XP_003578624.1| PREDICTED: cysteinyl-tRNA synthetase-like [Brachypodium distachyon]
Length = 567
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 104/174 (59%), Gaps = 9/174 (5%)
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFD 355
F + RY + M LPP+ RVS+ I I + I+ +LD AY+ S VYF
Sbjct: 154 FSLSKRYSDAFLSDMAHLQCLPPSVEPRVSDHIDQIVNMIKQILDNGCAYVVSG-DVYFS 212
Query: 356 VDSFPHYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGW 408
VD+FP Y L GR E I K++P DFALWK+AK GEPW++S WG GRPGW
Sbjct: 213 VDNFPEYGMLSGRKLDDNRAGERIAVDERKKNPADFALWKAAKDGEPWWDSPWGPGRPGW 272
Query: 409 HIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
HIECSAM++ + G D+H GG DL FPHHENE AQS A S +NYW+H G
Sbjct: 273 HIECSAMSAQYLGNSFDIHGGGEDLIFPHHENEIAQSRAACCDSS-INYWIHNG 325
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKED 115
Y CG T YD HIGHA V D++ R L Y + + TDIDDKII +AN L ED
Sbjct: 94 YVCGVTPYDDSHIGHARAYVAFDVLFRYL-RYLDYEVRYVRNFTDIDDKIIARANQLGED 152
Query: 116 YKTVAKRYFLPLIFKILH-QKVVGSIPTRGHAVCNVKLDIIRRILEH 161
+++KRY + + H Q + S+ R + +++I++IL++
Sbjct: 153 PFSLSKRYSDAFLSDMAHLQCLPPSVEPRVSDHIDQIVNMIKQILDN 199
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V D++ R L Y + + TDIDDKII +AN L ED +++KRY +
Sbjct: 107 GHARAYVAFDVLFRYL-RYLDYEVRYVRNFTDIDDKIIARANQLGEDPFSLSKRYSDAFL 165
Query: 204 FKILH 208
+ H
Sbjct: 166 SDMAH 170
>gi|426375959|ref|XP_004054781.1| PREDICTED: probable cysteine--tRNA ligase, mitochondrial [Gorilla
gorilla gorilla]
Length = 564
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 105/167 (62%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 143 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIARGHAYSTAKGNVYFDLKSRGD 202
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G KR DFALWK+AKP E ++ S WG GRPGWHIECSA+AS
Sbjct: 203 KYGKLVGVVPGPVGEPADSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIAS 262
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL
Sbjct: 263 MVFGSQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGHL 309
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 19/160 (11%)
Query: 14 ATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
A+ W P+G +TG+++YN +T K P I+ + WY+CGPTVYD H+GHA
Sbjct: 34 ASGGRGRAWLQPTGRETGVQVYNSLTGKKEPLIVAHAEAASWYSCGPTVYDHAHLGHACS 93
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL-----------KEDYK--TVA 120
V+ DIIRRIL F +++ +TD+DDKII +AN + +ED+K A
Sbjct: 94 YVRFDIIRRILTKVFGCSIVMVMGITDVDDKIIKRANEMNISPASLASLYEEDFKQDMAA 153
Query: 121 KRYFLPLIFKILHQKV------VGSIPTRGHAVCNVKLDI 154
+ P ++ + + + + I RGHA K ++
Sbjct: 154 LKVLPPTVYLRVTENIPQIISFIEGIIARGHAYSTAKGNV 193
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F +++ +TD+DDKII +AN + ++A Y
Sbjct: 89 GHACSYVRFDIIRRILTKVFGCSIVMVMGITDVDDKIIKRANEMNISPASLASLY 143
>gi|337288279|ref|YP_004627751.1| cysteinyl-tRNA synthetase [Thermodesulfobacterium sp. OPB45]
gi|334902017|gb|AEH22823.1| cysteinyl-tRNA synthetase [Thermodesulfobacterium geofontis OPF15]
Length = 490
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 106/169 (62%), Gaps = 9/169 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y EY + + G+L PT R SE IP I S I+ L++ AY S+ VYF+V FP
Sbjct: 96 KYIEEYEKVTQALGLLKPTYEPRASEHIPEIISLIEKLIEKGLAY-QSNGDVYFEVTKFP 154
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR I K++P DFALWKSAKPGEP++ES WGKGRPGWHIECS
Sbjct: 155 SYGKLSGRKIEELIAGVRIEVSEKKKNPLDFALWKSAKPGEPFWESPWGKGRPGWHIECS 214
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AMA + G +D+H GG+DL FPHHENE AQS + Q+ Y++H G
Sbjct: 215 AMALKYLGETIDIHGGGLDLIFPHHENEIAQSEG-ATEKQFARYFIHHG 262
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++IYN +TK FI N + Y CG T YDS H+GHA V D+ R+L+ Y
Sbjct: 7 LRIYNSLTKKIEDFIPLNPPKVTMYVCGITAYDSSHLGHARSAVIFDVFYRLLK-YLGYE 65
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I + ++TDIDDKIIN++N +K + ++Y
Sbjct: 66 VIYVRNITDIDDKIINRSNKEGIPWKELTQKY 97
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V D+ R+L+ Y I + ++TDIDDKIIN++N +K + ++Y
Sbjct: 44 GHARSAVIFDVFYRLLK-YLGYEVIYVRNITDIDDKIINRSNKEGIPWKELTQKY 97
>gi|387126947|ref|YP_006295552.1| cysteinyl-tRNA synthetase [Methylophaga sp. JAM1]
gi|386274009|gb|AFI83907.1| Cysteinyl-tRNA synthetase [Methylophaga sp. JAM1]
Length = 436
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 101/175 (57%), Gaps = 8/175 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY E + GVL P R R +E + + IQTL+D AY+ + VY+DV F
Sbjct: 67 RYIKEMHADADALGVLRPDREPRATEAMQPMLDMIQTLIDKGLAYVAENGDVYYDVSEFS 126
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR E I + K P DF LWK+AKP EP ++S WG GRPGWHIECS
Sbjct: 127 GYGKLSGRQVDDLRAGERIAVNEAKTDPLDFVLWKAAKPEEPAWDSPWGPGRPGWHIECS 186
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTD 468
AM++ G D+H GG DL+FPHHENE AQS H Q VNYW+H G +R D
Sbjct: 187 AMSAECLGHHFDIHGGGQDLQFPHHENEIAQSEGAHG-CQSVNYWMHNGFVRIDD 240
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKED 115
Y CG TVYD H+GHA V D++ R L + I ++TDIDDKII +A E
Sbjct: 2 YVCGMTVYDLCHVGHARVMVVFDVVTRYLRASGY-DVTYIRNITDIDDKIIKRAAENGET 60
Query: 116 YKTVAKRYF 124
+T+ RY
Sbjct: 61 IQTLTDRYI 69
>gi|402902476|ref|XP_003914128.1| PREDICTED: probable cysteine--tRNA ligase, mitochondrial [Papio
anubis]
Length = 563
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 105/167 (62%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 142 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIAHGHAYSTAKGNVYFDLKSRGD 201
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G KR DFALWK+AKP E ++ S WG GRPGWHIECSA+AS
Sbjct: 202 KYGKLVGVVPGPVGEPADSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIAS 261
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL
Sbjct: 262 MVFGSQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGHL 308
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 68/110 (61%)
Query: 14 ATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
A+ W P+G +TG+++YN +T+ K P I+ + WY+CGPTVYD H+GHA
Sbjct: 33 ASGGRGRAWLQPTGRETGVQVYNSLTRRKEPLIVAHAEATSWYSCGPTVYDHAHLGHACS 92
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
V+ DIIRRIL F + +++ +TD+DDKII +AN + ++A Y
Sbjct: 93 YVRFDIIRRILTKVFGCNIVMVMGITDVDDKIIKRANEMNISPASLASLY 142
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + +++ +TD+DDKII +AN + ++A Y
Sbjct: 88 GHACSYVRFDIIRRILTKVFGCNIVMVMGITDVDDKIIKRANEMNISPASLASLY 142
>gi|355675174|gb|AER95464.1| cysteinyl-tRNA synthetase 2, mitochondrial [Mustela putorius furo]
Length = 488
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 106/167 (63%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 69 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIANGHAYPTAQGNVYFDLQSRGD 128
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G + KR DFALWK+A+P E ++ S WG GRPGWHIECS ++S
Sbjct: 129 RYGKLVGVVPSPVGEPAATDKRHAGDFALWKAARPQEVFWASPWGNGRPGWHIECSTLSS 188
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GG+DL FPHHENE AQ AFH QW NY+LH+GHL
Sbjct: 189 LLFGSQLDIHSGGVDLAFPHHENEIAQCEAFHRCRQWGNYFLHSGHL 235
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 55 WYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKE 114
WY+CGPTVYD H+GHA V+ DIIRRIL F + +++ +TD+DDKII +A +
Sbjct: 1 WYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFGCNIVMVMGITDVDDKIIRRAAEMNV 60
Query: 115 DYKTVAKRY 123
++A Y
Sbjct: 61 SPASLASLY 69
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + +++ +TD+DDKII +A + ++A Y
Sbjct: 15 GHACSYVRFDIIRRILTRVFGCNIVMVMGITDVDDKIIRRAAEMNVSPASLASLY 69
>gi|289064335|gb|ADC80543.1| cysteine aminoacyl-tRNA synthetase [Toxoplasma gondii]
Length = 904
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 112/180 (62%), Gaps = 18/180 (10%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E E+F M V PT TRVSE+IP + + I+ ++ Y S SVYFD +F
Sbjct: 338 WEKEFFNDMTALNVRLPTVVTRVSEYIPEVVALIERIVKNGYGY-ESQGSVYFDTQTFRK 396
Query: 362 YFK-LWGRNE--NITQHA--------------VKRSPFDFALWKSAKPGEPWYESAWGKG 404
K ++GR E +++ A KR P DFALWK AK GEP ++S WGKG
Sbjct: 397 NEKHVYGRMEPTSVSDEARVLEGEGELGLTSSEKRHPCDFALWKKAKEGEPSWDSPWGKG 456
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
RPGWHIECSAMA +D+H+GGIDL+FPHH+NE AQS A +++ QWVNY+LH+GHL
Sbjct: 457 RPGWHIECSAMADSILPFPLDIHSGGIDLRFPHHDNELAQSEAANDRPQWVNYFLHSGHL 516
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 7/117 (5%)
Query: 14 ATSCESPK----WSLPSGYD---TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSP 66
T+C P W +P+ TG+ + N + KV F+ Q N + WY CGPTVYD+
Sbjct: 222 GTACCGPAVGEHWEMPTKEGKLLTGLMVNNSMAGGKVEFVPQKGNRVCWYGCGPTVYDAS 281
Query: 67 HIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
H+GHA V D+IRRI+ Y + + ++TDIDDKII ++ D+ T+A+ +
Sbjct: 282 HMGHARTYVTFDVIRRIMSDYLNYDVTMCMNITDIDDKIIKRSTEQGVDFLTLARHW 338
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V D+IRRI+ Y + + ++TDIDDKII ++ D+ T+A R++ +
Sbjct: 284 GHARTYVTFDVIRRIMSDYLNYDVTMCMNITDIDDKIIKRSTEQGVDFLTLA-RHWEKEF 342
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLAL 243
F D+ V V+T+ E+ E++AL
Sbjct: 343 FN------------DMTALNVRLPTVVTRVSEYIPEVVAL 370
>gi|221481003|gb|EEE19417.1| cysteinyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
Length = 684
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 112/180 (62%), Gaps = 18/180 (10%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E E+F M V PT TRVSE+IP + + I+ ++ Y S SVYFD +F
Sbjct: 124 WEKEFFNDMTALNVRLPTVVTRVSEYIPEVVALIERIVKNGYGY-ESQGSVYFDTQTFRK 182
Query: 362 YFK-LWGRNE--NITQHA--------------VKRSPFDFALWKSAKPGEPWYESAWGKG 404
K ++GR E +++ A KR P DFALWK AK GEP ++S WGKG
Sbjct: 183 NEKHVYGRMEPTSVSDEARVLEGEGELGLTSSEKRHPCDFALWKKAKEGEPSWDSPWGKG 242
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
RPGWHIECSAMA +D+H+GGIDL+FPHH+NE AQS A +++ QWVNY+LH+GHL
Sbjct: 243 RPGWHIECSAMADSILPFPLDIHSGGIDLRFPHHDNELAQSEAANDRPQWVNYFLHSGHL 302
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 7/117 (5%)
Query: 14 ATSCESPK----WSLPSGYD---TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSP 66
T+C P W +P+ TG+ + N + KV F+ Q N + WY CGPTVYD+
Sbjct: 8 GTACCGPAVGEHWEMPTKEGKLLTGLMVNNSMAGGKVEFVPQKGNRVCWYGCGPTVYDAS 67
Query: 67 HIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
H+GHA V D+IRRI+ Y + + ++TDIDDKII ++ D+ T+A+ +
Sbjct: 68 HMGHARTYVTFDVIRRIMSDYLNYDVTMCMNITDIDDKIIKRSTEQGVDFLTLARHW 124
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V D+IRRI+ Y + + ++TDIDDKII ++ D+ T+A R++ +
Sbjct: 70 GHARTYVTFDVIRRIMSDYLNYDVTMCMNITDIDDKIIKRSTEQGVDFLTLA-RHWEKEF 128
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLAL 243
F D+ V V+T+ E+ E++AL
Sbjct: 129 FN------------DMTALNVRLPTVVTRVSEYIPEVVAL 156
>gi|118431525|ref|NP_148045.2| cysteinyl-tRNA synthetase [Aeropyrum pernix K1]
gi|150421675|sp|Q9YBK6.2|SYC_AERPE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|116062850|dbj|BAA80592.2| cysteinyl-tRNA synthetase [Aeropyrum pernix K1]
Length = 472
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/171 (46%), Positives = 108/171 (63%), Gaps = 12/171 (7%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y +Y E + G+ RV++ I I FI+ L++ AY+ SVYF+VD +P
Sbjct: 92 YSRDYLEGLGSLGI-QIDHHPRVTDHISDIIRFIEGLIEKGYAYVAESGSVYFEVDKYPG 150
Query: 362 YFKL--------WGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L W + E++ K+SP+DFALWK+AKPGEP +ES WG+GRPGWHIECS
Sbjct: 151 YGMLSGHLSKEAWRQEEDVLHE--KKSPYDFALWKAAKPGEPSWESPWGRGRPGWHIECS 208
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
M+S + G ++D+H GG+DL FPHHENE AQS ++ +WV YWLH +L
Sbjct: 209 VMSSRYLGSRIDIHGGGVDLVFPHHENERAQSESYFGH-RWVRYWLHASYL 258
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILE----HY 87
I+++N + + K F + + Y CGPTVYD HIGHA D I+R L
Sbjct: 2 IRVFNTLGRRKEVFNPYSPPLVGMYVCGPTVYDYTHIGHARTFTVFDAIKRYLRLRGYDV 61
Query: 88 FHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
FH+ +I TDIDDKIIN+A D++ + + Y
Sbjct: 62 FHVQNI-----TDIDDKIINRAREEGRDWREIVREY 92
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 117 KTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRILE----HYFHIHSIVISS 172
K V Y PL+ + V GHA D I+R L FH+ +I
Sbjct: 12 KEVFNPYSPPLVGMYVCGPTVYDYTHIGHARTFTVFDAIKRYLRLRGYDVFHVQNI---- 67
Query: 173 VTDIDDKIINKANSLKEDYKTVAKRY 198
TDIDDKIIN+A D++ + + Y
Sbjct: 68 -TDIDDKIINRAREEGRDWREIVREY 92
>gi|149730502|ref|XP_001496717.1| PREDICTED: cysteinyl-tRNA synthetase, mitochondrial-like [Equus
caballus]
Length = 559
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 105/167 (62%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M +LPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 139 YEEDFKQDMAALKILPPTVYLRVTENIPQIISFIEGIIAKGHAYSTAKGNVYFDLQSRGD 198
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G V KR DFALWK+AKP E ++ S WG GRPGWHIECS ++S
Sbjct: 199 KYGKLVGVAPGPVGEPVESDKRHASDFALWKAAKPQEMFWASPWGNGRPGWHIECSTISS 258
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL
Sbjct: 259 LVFGSQLDIHSGGIDLAFPHHENEIAQCEVFHQCKQWGNYFLHSGHL 305
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 26/173 (15%)
Query: 14 ATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
A+ W P+GYDTG+K+YN T+ K P I+ + + WY+CGPTVYD H+GHA
Sbjct: 30 ASEAHGQGWLQPAGYDTGVKVYNSRTRRKDPLIVGSADATSWYSCGPTVYDHAHLGHACS 89
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL-----------KEDYK--TVA 120
V+ DIIRRIL F + I++ +TD+DDKII +A + +ED+K A
Sbjct: 90 YVRFDIIRRILTRVFGCNIIMVMGITDVDDKIIRRAREMNVSPTSLANLYEEDFKQDMAA 149
Query: 121 KRYFLPLIFKILHQKV------VGSIPTRGHAVCNVKLDIIRRILEHYFHIHS 167
+ P ++ + + + + I +GHA K ++ YF + S
Sbjct: 150 LKILPPTVYLRVTENIPQIISFIEGIIAKGHAYSTAKGNV-------YFDLQS 195
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + I++ +TD+DDKII +A + ++A Y
Sbjct: 85 GHACSYVRFDIIRRILTRVFGCNIIMVMGITDVDDKIIRRAREMNVSPTSLANLY 139
>gi|397524296|ref|XP_003832136.1| PREDICTED: probable cysteine--tRNA ligase, mitochondrial isoform 2
[Pan paniscus]
Length = 341
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 107/176 (60%), Gaps = 4/176 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 30 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIARGNAYSTAKGNVYFDLKSRGD 89
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G KR DFALWK+AKP E ++ S WG GRPGWHIECSA+AS
Sbjct: 90 KYGKLVGVVPGPVGEPADSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIAS 149
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL ++
Sbjct: 150 MVFGNQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGHLHAKGKEEKM 205
>gi|332242120|ref|XP_003270234.1| PREDICTED: probable cysteine--tRNA ligase, mitochondrial isoform 2
[Nomascus leucogenys]
Length = 572
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 105/167 (62%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ +
Sbjct: 143 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIARGHAYSTAKGNVYFDLKARGD 202
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G KR DFALWK+AKP E ++ S WG GRPGWHIECSA+AS
Sbjct: 203 KYGKLVGVVPGPVGEPADSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIAS 262
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL
Sbjct: 263 MVFGSQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGHL 309
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 19/160 (11%)
Query: 14 ATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
A+ W P+G +TG+++YN +T K P I+ + WY+CGPTVYD H+GHA
Sbjct: 34 ASGGRGRAWLQPTGRETGVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACS 93
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL-----------KEDYK--TVA 120
V+ DIIRRIL F + +++ +TD+DDKII +AN + +ED+K A
Sbjct: 94 YVRFDIIRRILTKVFGCNIVMVMGITDVDDKIIKRANEMNISPASLASLYEEDFKQDMAA 153
Query: 121 KRYFLPLIFKILHQKV------VGSIPTRGHAVCNVKLDI 154
+ P ++ + + + + I RGHA K ++
Sbjct: 154 LKVLPPTVYLRVTENIPQIISFIEGIIARGHAYSTAKGNV 193
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + +++ +TD+DDKII +AN + ++A Y
Sbjct: 89 GHACSYVRFDIIRRILTKVFGCNIVMVMGITDVDDKIIKRANEMNISPASLASLY 143
>gi|413945619|gb|AFW78268.1| hypothetical protein ZEAMMB73_967684 [Zea mays]
Length = 568
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 108/175 (61%), Gaps = 9/175 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E+ M + LPPT RV+E I HI I +++ +AY + VYF V+SFP
Sbjct: 122 RFINEFLLDMTELQCLPPTCEPRVTEHIEHIIELITKIMENDKAY-AMEGDVYFSVESFP 180
Query: 361 HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L GR + Q KR+P DFALWK+AK GEP+++S WG+GRPGWHIECS
Sbjct: 181 EYLSLSGRKFDQNQAGARVAFDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECS 240
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTD 468
AM++H+ G D+H GG DL FPHHENE AQS A + +S+ V W+H G + D
Sbjct: 241 AMSAHYLGHLFDIHGGGKDLIFPHHENELAQSRAAYPESE-VKCWMHNGFVNKDD 294
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 5 SQSSLALSYATSCES-PKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTV 62
+QS L+ + A +S P ++ + ++N +TK + PF + + + Y CG T
Sbjct: 4 AQSPLSATMAKEAQSSPSATVAQATALPQLVLFNSLTKREEPFQPRVEGKVGMYVCGVTP 63
Query: 63 YDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
YD HIGHA V D++ R L+ + + + TDIDDKII +AN E +++ R
Sbjct: 64 YDFSHIGHARAYVAFDVLYRYLK-FLGYEVEYVRNFTDIDDKIIKRANERGETVTSLSSR 122
Query: 123 Y 123
+
Sbjct: 123 F 123
>gi|224031007|gb|ACN34579.1| unknown [Zea mays]
Length = 400
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 103/161 (63%), Gaps = 11/161 (6%)
Query: 310 MEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI-GSDHSVYFDVDSFPHYFKLWGR 368
M LPP+ RVS+ + I + I+ +LD + AY+ G D VYF VD+FP Y +L GR
Sbjct: 1 MANLQCLPPSVEPRVSDHVDEIINMIKQILDNRCAYVVGGD--VYFSVDNFPEYGELSGR 58
Query: 369 -------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFG 421
E + KR+P DFALWK+AK GEPW++S WG GRPGWHIECSAM++H+ G
Sbjct: 59 KLDDNRAGERVAVDERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLG 118
Query: 422 GQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
D+H GG DL FPHHENE AQS A S +NYW+H G
Sbjct: 119 HSFDIHGGGEDLIFPHHENEIAQSRAACCDST-INYWIHNG 158
>gi|357466121|ref|XP_003603345.1| Cysteinyl tRNA synthetase [Medicago truncatula]
gi|355492393|gb|AES73596.1| Cysteinyl tRNA synthetase [Medicago truncatula]
Length = 608
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 81/169 (47%), Positives = 106/169 (62%), Gaps = 9/169 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY E+ + M LP T +VSE +P I I+ +L+ AY D +YF+V+ FP
Sbjct: 165 RYCEEFCQDMVTLNCLPATVEPKVSEHMPQIIEMIEKILNNGYAY-DVDGDIYFNVEKFP 223
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL R E + + K++P DFALWKS KPGEP++ES WG GRPGWHIECS
Sbjct: 224 EYGKLSSRGLEDNRAGERVAVDSRKKNPADFALWKSTKPGEPFWESPWGPGRPGWHIECS 283
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM++ + G D+H GGIDL FPHHENE AQSCA ++S ++ W+H G
Sbjct: 284 AMSAAYLGYSFDIHGGGIDLVFPHHENEIAQSCAACSKSD-ISVWMHNG 331
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
++N ++K K F + + + Y CG T YD HIGHA V D++ R +H
Sbjct: 78 LHNTMSKKKELFKPKVEKKVGMYVCGVTAYDLSHIGHARVYVNFDLLYRYFKH-LGFQVC 136
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKII ++ L ED ++++RY
Sbjct: 137 YVRNFTDVDDKIIARSKELGEDPISLSRRY 166
>gi|145499052|ref|XP_001435512.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402645|emb|CAK68115.1| unnamed protein product [Paramecium tetraurelia]
Length = 679
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 88/202 (43%), Positives = 118/202 (58%), Gaps = 17/202 (8%)
Query: 295 EFL-FNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVY 353
+FL F +E ++F +ME + P TRVS+++P I +FI+ ++ AY S+ SVY
Sbjct: 121 DFLEFTRVWEKDFFSAMEALNIELPDVITRVSDYVPEIVTFIEKIIANGYAY-DSNGSVY 179
Query: 354 FDVDSFPH----YFKL----------WGRNEN-ITQHAVKRSPFDFALWKSAKPGEPWYE 398
FDV + Y K+ G E+ + + KRSP DFALWK++KP EP +
Sbjct: 180 FDVQKYLADGHTYPKMRPEMNVDLLQEGEGESQVNKQQEKRSPNDFALWKASKPEEPKWP 239
Query: 399 SAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYW 458
S WG+GRPGWHIECS MAS G +DLH GGIDL FPHH+N AQ+ A N QW+NY+
Sbjct: 240 SPWGEGRPGWHIECSVMASAILGNPIDLHAGGIDLIFPHHDNSLAQAEACFNCDQWINYF 299
Query: 459 LHTGHLRGTDGTRRLRAARFIT 480
+H GHL D F+T
Sbjct: 300 IHLGHLNIADRKMSKSLKNFLT 321
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 27 GYDTGIKIYNPITKTK-VPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILE 85
Y TG+K+ N + ++ VPFI N + +Y CGPTVY + H+GHA + +D+IRR L
Sbjct: 32 SYVTGLKLANSLKGSELVPFIPINGRQVNFYYCGPTVYSNSHLGHARTYLGIDVIRRTLR 91
Query: 86 HYFHIHSIVISSVTDIDDKIINKANSLKEDY 116
YF+ + + ++TDIDDKIIN A K+D+
Sbjct: 92 DYFNYDLLSVMNITDIDDKIINGAKLAKQDF 122
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDY 191
GHA + +D+IRR L YF+ + + ++TDIDDKIIN A K+D+
Sbjct: 75 GHARTYLGIDVIRRTLRDYFNYDLLSVMNITDIDDKIINGAKLAKQDF 122
>gi|330834076|ref|YP_004408804.1| cysteinyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
gi|329566215|gb|AEB94320.1| cysteinyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
Length = 466
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 103/149 (69%), Gaps = 11/149 (7%)
Query: 323 RVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL-------WGRNENITQH 375
+VS I I F+Q L+D AY+ ++ SVYFDVD++P Y +L W + E I +
Sbjct: 112 KVSSHIKEIIDFVQGLIDRGHAYV-ANGSVYFDVDTYPKYGELSNIRKEEWDQGEEIVKE 170
Query: 376 AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKF 435
K++P+DFALWK+ KPGEP+++S WGKGRPGWHIECS M++ + G ++D+H GGIDL F
Sbjct: 171 --KKNPYDFALWKAYKPGEPFWDSPWGKGRPGWHIECSTMSTRYLGTKIDIHGGGIDLVF 228
Query: 436 PHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
PHHENE AQ+ + N + WV YW+H L
Sbjct: 229 PHHENERAQTESITNDT-WVKYWMHVAFL 256
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 71/134 (52%), Gaps = 21/134 (15%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILE-HYFHI 90
++++N + + FI + ++ Y CGPTVYD HIGH V D I R L F++
Sbjct: 2 LRVFNTLGRRIDSFIPNEPHSVRMYVCGPTVYDEVHIGHGRTFVSFDAISRYLRLKGFNV 61
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRY---FLPLI----FKI-LHQKV------ 136
I + ++TDIDDKIINKA S+ + + V++ Y +L +I KI +H KV
Sbjct: 62 --IRVQNITDIDDKIINKAKSVGKSWNEVSEYYTKSYLEMINLLKVKIDIHPKVSSHIKE 119
Query: 137 ----VGSIPTRGHA 146
V + RGHA
Sbjct: 120 IIDFVQGLIDRGHA 133
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 13/95 (13%)
Query: 144 GHAVCNVKLDIIRRILE-HYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY---F 199
GH V D I R L F++ I + ++TDIDDKIINKA S+ + + V++ Y +
Sbjct: 39 GHGRTFVSFDAISRYLRLKGFNV--IRVQNITDIDDKIINKAKSVGKSWNEVSEYYTKSY 96
Query: 200 LRLI----FKI-LHQKVVR--KLAIDLKKAKVDSG 227
L +I KI +H KV K ID + +D G
Sbjct: 97 LEMINLLKVKIDIHPKVSSHIKEIIDFVQGLIDRG 131
>gi|288940189|ref|YP_003442429.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
gi|288895561|gb|ADC61397.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
Length = 461
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 100/165 (60%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E E GVLPPT R + I I + +QTL+D AY+ + VY+ V FP Y KL G
Sbjct: 98 EDSEALGVLPPTDEPRATAHIGEILAMVQTLIDKGLAYVADNGDVYYAVSRFPDYGKLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ + KR P DFALWK+AKPGEP ++S WG GRPGWHIECSAM++
Sbjct: 158 KDPADLRAGSRVEIGESKRDPLDFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTCCL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS + +VN W+H G +R
Sbjct: 218 GNHFDIHGGGADLQFPHHENEIAQSEGATGEP-FVNVWMHNGFVR 261
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++I+N +T+ K PF ++ Y CG TVYD H+GHA V D++ R L
Sbjct: 2 LQIHNSLTRQKAPFQPIEPGKVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYL-RALGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
I ++TDIDDKII +AN E ++ + +R+
Sbjct: 61 VTYIRNITDIDDKIIRRANENGEPFQALTERFI 93
>gi|167624689|ref|YP_001674983.1| cysteinyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
gi|189082075|sp|B0TLV2.1|SYC_SHEHH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|167354711|gb|ABZ77324.1| cysteinyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
Length = 459
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R ++ IP I ++ L++ AY+ S V F V SFP Y +
Sbjct: 95 EMHKDFDSLNMARPDNEPRATQHIPEIIDMVERLIERDHAYVASSGDVLFSVSSFPEYGR 154
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L G+N Q KR P DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSGQNLEQLQAGARVEVEDTKRDPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ + +VNYW+HTG
Sbjct: 215 KHLGNHFDIHGGGSDLQFPHHENEIAQSCCAHD-TPYVNYWMHTG 258
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T+ K F+ + Y CG T+YD HIGH V D+I R L Y
Sbjct: 2 LKLYNSLTRQKEQFVPLQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYL-RYSGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL--IFKILHQKVVGSIPTRGHAVCN 149
++TD+DDKII +AN E ++ +R + F L+ + P +
Sbjct: 61 VNFQRNITDVDDKIIKRANENNESCDSLTERLIAEMHKDFDSLNMARPDNEPRATQHIPE 120
Query: 150 VKLDIIRRILEHYFHIHSIVISS 172
+ +D++ R++E H+ V SS
Sbjct: 121 I-IDMVERLIE---RDHAYVASS 139
>gi|417402749|gb|JAA48210.1| Putative cysteinyl-trna synthetase [Desmodus rotundus]
Length = 559
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 105/167 (62%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 139 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIANGHAYSTAKGNVYFDLQSRGD 198
Query: 361 HYFKLWGRNENITQH---AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G + KR DFALWK+AKP E ++ S WG GRPGWHIECS ++S
Sbjct: 199 KYGKLVGVAPGPVAEPGDSDKRHARDFALWKAAKPQEMFWASPWGNGRPGWHIECSTISS 258
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL
Sbjct: 259 LVFGSQLDIHSGGIDLAFPHHENEIAQCEVFHQCQQWGNYFLHSGHL 305
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 69/109 (63%)
Query: 15 TSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCN 74
+ W P+G+DTG+K+YN +T+ K I+ + + WY+CGPTVYD H+GHA
Sbjct: 31 SGARGKDWLQPAGHDTGVKVYNSLTQRKDSLIVGSADAASWYSCGPTVYDHAHLGHACSY 90
Query: 75 VKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
V+ DIIRRIL F + I++ +TDIDDKII +A+ +K ++A Y
Sbjct: 91 VRFDIIRRILTRVFGCNIIMVMGITDIDDKIIKRAHEMKISPASLANLY 139
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + I++ +TDIDDKII +A+ +K ++A Y
Sbjct: 85 GHACSYVRFDIIRRILTRVFGCNIIMVMGITDIDDKIIKRAHEMKISPASLANLY 139
>gi|224141927|ref|XP_002324312.1| predicted protein [Populus trichocarpa]
gi|222865746|gb|EEF02877.1| predicted protein [Populus trichocarpa]
Length = 493
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/169 (47%), Positives = 104/169 (61%), Gaps = 9/169 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY E+ M LPP+ RVS+ +P I I+ +L+ AY D VYF VD P
Sbjct: 84 RYCEEFLHDMVYLHCLPPSVEPRVSDHMPQIIDMIERILENGYAY-RIDGDVYFSVDKLP 142
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L GR E + + K++P DFALWKSAK GEP+++S WG GRPGWHIECS
Sbjct: 143 EYGRLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWDSPWGPGRPGWHIECS 202
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM++ + G D+H GG+DL FPHHENE AQSCA S ++YW+H G
Sbjct: 203 AMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACRDSN-ISYWVHNG 250
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 4/128 (3%)
Query: 38 ITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHY-FHIHSIVIS 96
+++ K F + + + Y CG T YD HIGHA V D++ R L+H F +H +
Sbjct: 1 MSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGFDVH--YVR 58
Query: 97 SVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVV-GSIPTRGHAVCNVKLDII 155
+ TD+DDKII +AN L ED +++KRY + +++ + S+ R +D+I
Sbjct: 59 NFTDVDDKIIARANELGEDPISLSKRYCEEFLHDMVYLHCLPPSVEPRVSDHMPQIIDMI 118
Query: 156 RRILEHYF 163
RILE+ +
Sbjct: 119 ERILENGY 126
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 144 GHAVCNVKLDIIRRILEHY-FHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V D++ R L+H F +H + + TD+DDKII +AN L ED +++KRY
Sbjct: 32 GHARVYVTFDVLLRYLKHLGFDVH--YVRNFTDVDDKIIARANELGEDPISLSKRY 85
>gi|401412406|ref|XP_003885650.1| hypothetical protein NCLIV_060470 [Neospora caninum Liverpool]
gi|325120070|emb|CBZ55622.1| hypothetical protein NCLIV_060470 [Neospora caninum Liverpool]
Length = 671
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 115/198 (58%), Gaps = 22/198 (11%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E E+F M V P+ TRVSE+IP + S I+ ++ Y S SVYFD +F
Sbjct: 103 WEKEFFNDMAALNVRLPSVVTRVSEYIPEVLSLIERIVKNGYGY-ESQGSVYFDTQTFRK 161
Query: 362 YFK-----------------LWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKG 404
K L G E + KR P DFALWK AK GEP ++S WGKG
Sbjct: 162 TDKHIYGRMEPSSVSDESRVLEGEGELGLTSSEKRHPCDFALWKKAKEGEPSWDSPWGKG 221
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
RPGWHIECSAMA +D+H+GGIDL+FPHH+NE AQS A +++ QWVNY+LH+GHL
Sbjct: 222 RPGWHIECSAMADSILPFPLDIHSGGIDLRFPHHDNELAQSEAANDRPQWVNYFLHSGHL 281
Query: 465 --RGTDGTRRLRAARFIT 480
G ++ L+ FIT
Sbjct: 282 HIHGAKMSKSLK--NFIT 297
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Query: 30 TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
TG+ + N + KV F+ Q N + WY CGPTVYD+ H+GHA V D+IRRI+ Y +
Sbjct: 10 TGLMVNNSMAGGKVEFVPQKGNRVCWYGCGPTVYDASHMGHARTYVTFDVIRRIMSDYLN 69
Query: 90 IHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKV-VGSIPTRGHAVC 148
+ ++TDIDDKII ++ D+ T+A+ + + V + S+ TR
Sbjct: 70 YDVTMCMNITDIDDKIIKRSIEQGVDFLTLARHWEKEFFNDMAALNVRLPSVVTRVSEYI 129
Query: 149 NVKLDIIRRILEHYFHIHS 167
L +I RI+++ + S
Sbjct: 130 PEVLSLIERIVKNGYGYES 148
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V D+IRRI+ Y + + ++TDIDDKII ++ D+ T+A R++ +
Sbjct: 49 GHARTYVTFDVIRRIMSDYLNYDVTMCMNITDIDDKIIKRSIEQGVDFLTLA-RHWEKEF 107
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLAL 243
F D+ V V+T+ E+ E+L+L
Sbjct: 108 FN------------DMAALNVRLPSVVTRVSEYIPEVLSL 135
>gi|408397690|gb|EKJ76830.1| hypothetical protein FPSE_03016 [Fusarium pseudograminearum CS3096]
Length = 800
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 175/366 (47%), Gaps = 54/366 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLK----EDYKTVAKRYF 199
GHA V DIIRRIL HYF + ++TDIDDKII KA + E K ++
Sbjct: 42 GHARNYVSTDIIRRILMHYFGFEVKFVMNITDIDDKIIIKARRQRLLELEKNKNYSEDEL 101
Query: 200 LRLIFKILHQKVVRKLAIDLKKAK-VDSGPVLTKCDEFRDELLALGVQIKDQK------- 251
L L + LK + +D+ + + +LA G + K
Sbjct: 102 RDLALAAFQAYAKSSLPLLLKDGEDIDATNYAQRRETGYGHVLAGGTISGEGKPGDDEAK 161
Query: 252 --------CEATWQFKDGKVFSDRVFISLP----LYLILIQVSLLGPLTLRTVVFEFLFN 299
A G++F I LP LY I T T E LF
Sbjct: 162 VKMHLSNMTSAAEAIASGEIFPGTDEILLPYLDSLYKETIDTGDQTMFTDLTQSMEKLF- 220
Query: 300 FRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF 359
+ M+ VL P TRV+E++ I F++ ++D AY +D SVYFD+ +F
Sbjct: 221 -------MDDMDALNVLRPNVITRVTEYVDQIADFVKAIVDKGFAY-EADGSVYFDITAF 272
Query: 360 PH----YFKLW--GRNENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWGK 403
Y +L RN+ Q + K++P DFALWK +K GEP+++S WGK
Sbjct: 273 EKAGNTYARLRPDNRNDKSLQEEGEGSLSKGLSGKKNPGDFALWKKSKAGEPFWDSPWGK 332
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF---HNQSQ--WVNYW 458
GRPGWHIECS MA G +D+H+GGIDL FPHH+NE AQS A+ H + + WVNY+
Sbjct: 333 GRPGWHIECSVMAGAVLGSNMDIHSGGIDLAFPHHDNELAQSEAYFCEHGKGEHTWVNYF 392
Query: 459 LHTGHL 464
LH GHL
Sbjct: 393 LHMGHL 398
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 32 IKIYNPIT-KTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
+K+YN + VPF+ K + WYACGPTVYD H+GHA V DIIRRIL HYF
Sbjct: 4 LKLYNSLKPGAPVPFVPIEKGKVSWYACGPTVYDKSHLGHARNYVSTDIIRRILMHYF 61
>gi|226531133|ref|NP_001146887.1| LOC100280495 [Zea mays]
gi|195604736|gb|ACG24198.1| cysteinyl-tRNA synthetase [Zea mays]
gi|413945620|gb|AFW78269.1| cysteinyl-tRNA synthetase [Zea mays]
Length = 556
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 108/175 (61%), Gaps = 9/175 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E+ M + LPPT RV+E I HI I +++ +AY + VYF V+SFP
Sbjct: 122 RFINEFLLDMTELQCLPPTCEPRVTEHIEHIIELITKIMENDKAY-AMEGDVYFSVESFP 180
Query: 361 HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L GR + Q KR+P DFALWK+AK GEP+++S WG+GRPGWHIECS
Sbjct: 181 EYLSLSGRKFDQNQAGARVAFDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECS 240
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTD 468
AM++H+ G D+H GG DL FPHHENE AQS A + +S+ V W+H G + D
Sbjct: 241 AMSAHYLGHLFDIHGGGKDLIFPHHENELAQSRAAYPESE-VKCWMHNGFVNKDD 294
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 5 SQSSLALSYATSCES-PKWSLPSGYDT-GIKIYNPITKTKVPFIIQNKNHLKWYACGPTV 62
+QS L+ + A +S P ++ + ++N +TK + PF + + + Y CG T
Sbjct: 4 AQSPLSATMAKEAQSSPSATVAQATALPQLVLFNSLTKREEPFQPRVEGKVGMYVCGVTP 63
Query: 63 YDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
YD HIGHA V D++ R L+ + + + TDIDDKII +AN E +++ R
Sbjct: 64 YDFSHIGHARAYVAFDVLYRYLK-FLGYEVEYVRNFTDIDDKIIKRANERGETVTSLSSR 122
Query: 123 Y 123
+
Sbjct: 123 F 123
>gi|387771057|ref|ZP_10127229.1| cysteine--tRNA ligase [Pasteurella bettyae CCUG 2042]
gi|386902976|gb|EIJ67797.1| cysteine--tRNA ligase [Pasteurella bettyae CCUG 2042]
Length = 459
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 103/167 (61%), Gaps = 8/167 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R ++ +P I + ++ L+ AY+ +D V FDV+S+ +Y +
Sbjct: 95 EMHKDFDALNILRPDVEPRATKHMPEIIAMVEALIKRGHAYVAADGDVMFDVESYQNYGR 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q +VK++P DF LWK +KP EP +ES WGKGRPGWHIECSAM S
Sbjct: 155 LSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKPNEPSWESPWGKGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG DL FPHHENE AQSC H+ ++VNYWLHTG L
Sbjct: 215 KELGNHFDIHGGGSDLMFPHHENEIAQSCCAHD-GEYVNYWLHTGML 260
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KI+N +T+ K F N N + Y CG TVYD H GH V D+I R L + +
Sbjct: 2 LKIFNTLTREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYL-RFLGYN 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
I ++TD+DDKII +A E + +R +
Sbjct: 61 LRFIRNITDVDDKIIKRALENNETCDQLVERMIAEM 96
>gi|323144957|ref|ZP_08079517.1| cysteine--tRNA ligase [Succinatimonas hippei YIT 12066]
gi|322415236|gb|EFY06010.1| cysteine--tRNA ligase [Succinatimonas hippei YIT 12066]
Length = 470
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 101/167 (60%), Gaps = 10/167 (5%)
Query: 304 LEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYF 363
+E + + ++ P R +E IP I + +Q L+D AY+ + V F +D+F Y
Sbjct: 107 VEMHKDFDALNIMRPDEEPRATETIPEIIALVQRLIDNGNAYVADNGDVMFAIDTFKQYG 166
Query: 364 KLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
+L G+N I KR+PFDF LWK +KPGEP + S WG GRPGWHIECSAM
Sbjct: 167 RLSGQNLEELEAGARIEIEKTKRNPFDFVLWKMSKPGEPSWSSPWGDGRPGWHIECSAMN 226
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQS-CAFHNQSQWVNYWLHTG 462
+ G D+H GG DL FPHHENE AQS CA H S++VNYW+H+G
Sbjct: 227 LKYLGENFDIHGGGSDLIFPHHENEIAQSCCACH--SKYVNYWMHSG 271
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++I+N I++ K F N+ + Y CG TVYD HIGHA V D++ R L Y
Sbjct: 15 LQIHNTISRKKEEFKPINEGQIGMYVCGVTVYDLCHIGHARTFVNFDMVVRYL-RYRGYK 73
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
I ++TDIDDKII +A+ K K +A+ + + +
Sbjct: 74 VRYIRNITDIDDKIIKRAHERKVSAKELAENFIVEM 109
>gi|429759537|ref|ZP_19292035.1| cysteine--tRNA ligase [Veillonella atypica KON]
gi|429179498|gb|EKY20745.1| cysteine--tRNA ligase [Veillonella atypica KON]
Length = 488
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 104/173 (60%), Gaps = 12/173 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY YFE M+ GV RVS IP I I+TL+D AY D VYF V+ F
Sbjct: 99 RYIDSYFEVMDALGVERADVYPRVSTHIPDILKMIETLIDKGYAY-ELDGDVYFSVEKFD 157
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
HY +L GR I K++P DFALWK+AKPGEP++ES WG GRPGWHIECS
Sbjct: 158 HYGELSGRTLDDMEAGARIEVDGRKKNPMDFALWKAAKPGEPFWESPWGNGRPGWHIECS 217
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQS--CAFHNQSQWVNYWLHTGHL 464
AM+ + G + D H GG DL FPHHENE AQS C+ H+ S V YWLH G +
Sbjct: 218 AMSQKYLGEEFDFHGGGSDLIFPHHENEIAQSEGCSGHHPS--VKYWLHNGFI 268
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I +YN +T+ K F K Y CG T Y+ PHIG+A V D+IRR ++H +
Sbjct: 10 ITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGY-K 68
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKIIN +N + +A RY
Sbjct: 69 VTYVQNFTDVDDKIINTSNGEGVAWDVIANRY 100
>gi|431913207|gb|ELK14889.1| Putative cysteinyl-tRNA synthetase, mitochondrial [Pteropus alecto]
Length = 557
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 105/167 (62%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVD-SFP 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+
Sbjct: 137 YEEDFKQDMAALKVLPPTVYMRVTENIPQIISFIEGIIANGHAYSTAKGNVYFDLQLRGD 196
Query: 361 HYFKLWGRNENITQH---AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G + + KR DFALWK+AKP E ++ S WG GRPGWHIECS ++S
Sbjct: 197 KYGKLVGAAPSPLAEPGDSDKRHASDFALWKAAKPQEMFWASPWGNGRPGWHIECSTISS 256
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL
Sbjct: 257 LVFGSQLDIHSGGIDLAFPHHENEIAQCEVFHQCKQWGNYFLHSGHL 303
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 85/152 (55%), Gaps = 19/152 (12%)
Query: 22 WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
W P+G+DTG+K+YN +T+ K P I+ + + WY+CGPTVYD H+GHA V+ DIIR
Sbjct: 36 WLQPAGHDTGVKVYNSLTRRKDPLIVGSADAASWYSCGPTVYDHAHLGHACSYVRFDIIR 95
Query: 82 RILEHYFHIHSIVISSVTDIDDKIINKANSL-----------KEDYK--TVAKRYFLPLI 128
RIL F + I++ +TD+DDKII KAN + +ED+K A + P +
Sbjct: 96 RILTRVFGCNIIMVMGITDVDDKIIKKANEMNISPTSLASLYEEDFKQDMAALKVLPPTV 155
Query: 129 FKILHQKV------VGSIPTRGHAVCNVKLDI 154
+ + + + + I GHA K ++
Sbjct: 156 YMRVTENIPQIISFIEGIIANGHAYSTAKGNV 187
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + I++ +TD+DDKII KAN + ++A Y
Sbjct: 83 GHACSYVRFDIIRRILTRVFGCNIIMVMGITDVDDKIIKKANEMNISPTSLASLY 137
>gi|432092315|gb|ELK24935.1| Putative cysteinyl-tRNA synthetase, mitochondrial [Myotis davidii]
Length = 450
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 105/167 (62%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY + +VYFD+ S
Sbjct: 30 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIANGHAYSTARGNVYFDLQSRGD 89
Query: 361 HYFKLWGRNENITQH---AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G + KR DFALWK+AKP E ++ S WG GRPGWHIECS ++S
Sbjct: 90 KYGKLVGVAPGPVAEPGDSDKRHASDFALWKAAKPQEVFWPSPWGNGRPGWHIECSTISS 149
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL
Sbjct: 150 LVFGSQLDIHSGGIDLAFPHHENEIAQCEVFHQCQQWGNYFLHSGHL 196
>gi|52424677|ref|YP_087814.1| cysteinyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
gi|52306729|gb|AAU37229.1| CysS protein [Mannheimia succiniciproducens MBEL55E]
Length = 476
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 100/167 (59%), Gaps = 8/167 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R ++ IP I + ++TL+ AY+ D V FDV+SF Y
Sbjct: 113 EMHKDFDALNILRPDVEPRATKHIPEIIAMVETLIRRGHAYVAEDGDVMFDVESFQKYGA 172
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q +VK++P DF LWK +KP EP ++S WGKGRPGWHIECSAM
Sbjct: 173 LSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMND 232
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG DL FPHHENE AQSC H+ ++VNYWLHTG L
Sbjct: 233 KELGNHFDIHGGGSDLMFPHHENEIAQSCCAHD-GEYVNYWLHTGML 278
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KI+N +T+ K F N N + Y CG TVYD H GH V D+I R L Y
Sbjct: 20 LKIFNTLTREKEEFKPINPNKVGMYVCGVTVYDLCHFGHGRTFVSFDVITRYL-RYLGYD 78
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TD+DDKII +A E + +R +
Sbjct: 79 LRYVRNITDVDDKIIKRALENNETCDQLVERMIAEM 114
>gi|95929121|ref|ZP_01311866.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
gi|95135022|gb|EAT16676.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
Length = 481
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 100/162 (61%), Gaps = 9/162 (5%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E M + G+ PT + +E I HI + ++ L+ +AY SD VYF V+SF Y KL
Sbjct: 99 EDMARLGLDLPTVQPKATEHIDHIIALVERLIANGKAY-ASDGDVYFAVESFDSYLKLSK 157
Query: 368 RNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
RN + Q KR+P DFALWK+AKPGEP +ES WGKGRPGWHIECSAM +
Sbjct: 158 RNLDEMQAGARIAPGEKKRNPMDFALWKAAKPGEPSWESPWGKGRPGWHIECSAMGMEYL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL FPHHENE AQS A Q +V YWLH G
Sbjct: 218 GESFDIHGGGKDLVFPHHENEIAQSEAATGQP-FVKYWLHNG 258
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+++YN ++ K F + + Y CG TVYD HIGHA N+ DI+ R L+ Y
Sbjct: 3 LRVYNTLSGNKELFEPRVPGKVGMYVCGVTVYDYCHIGHARANIVFDIVYRYLK-YSDYD 61
Query: 92 SIVISSVTDIDDKIINKANS 111
+ + TD+DDKIIN+AN
Sbjct: 62 VTYVRNYTDVDDKIINRANE 81
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 14/100 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA N+ DI+ R L+ Y + + TD+DDKIIN+AN +
Sbjct: 40 GHARANIVFDIVYRYLK-YSDYDVTYVRNYTDVDDKIINRANERG-------------IT 85
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLAL 243
+ L ++ ++ D+ + +D V K E D ++AL
Sbjct: 86 SQQLSEEFIQAFDEDMARLGLDLPTVQPKATEHIDHIIAL 125
>gi|389580502|ref|ZP_10170529.1| cysteinyl-tRNA synthetase [Desulfobacter postgatei 2ac9]
gi|389402137|gb|EIM64359.1| cysteinyl-tRNA synthetase [Desulfobacter postgatei 2ac9]
Length = 480
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 101/169 (59%), Gaps = 8/169 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y E+ M+ VL PT A + +E I HI F+Q L+D +AY VYF + SF
Sbjct: 92 KYIDEFHNEMDALNVLRPTIAPKATEHIDHIIRFVQRLIDLGKAYHVEGGDVYFSISSFS 151
Query: 361 HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL RN + Q KRSP DF LWK AKPGEP+++S WGKGRPGWHIECS
Sbjct: 152 EYGKLSHRNPDDMQAGARIAVDEKKRSPLDFTLWKPAKPGEPYWDSPWGKGRPGWHIECS 211
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM+ + G D+H GG DL FPHHENE AQS A +V YW+H G
Sbjct: 212 AMSYEYLGESFDIHGGGKDLIFPHHENEIAQSEASFG-VPFVKYWIHNG 259
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++IYN ++ K F+ N + Y CGPTVYD+ HIGHA V D++ R L +
Sbjct: 3 LRIYNTLSGKKEEFVPIRANKVGMYVCGPTVYDTSHIGHARSVVVFDMVYRWLMQLGY-E 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKII K+N + + +Y
Sbjct: 62 VTYVRNFTDVDDKIIKKSNETGDSCTAITTKY 93
>gi|303228928|ref|ZP_07315738.1| cysteine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
gi|302516342|gb|EFL58274.1| cysteine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
Length = 482
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 104/173 (60%), Gaps = 12/173 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY YFE M+ GV RVS IP I I+TL+D AY D VYF V+ F
Sbjct: 93 RYIDSYFEVMDALGVERADVYPRVSTHIPDILKMIETLIDKGYAY-ELDGDVYFSVEKFD 151
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
HY +L GR I K++P DFALWK+AKPGEP++ES WG GRPGWHIECS
Sbjct: 152 HYGELSGRTLDDMEAGARIEVDGRKKNPMDFALWKAAKPGEPFWESPWGNGRPGWHIECS 211
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQS--CAFHNQSQWVNYWLHTGHL 464
AM+ + G + D H GG DL FPHHENE AQS C+ H+ S V YWLH G +
Sbjct: 212 AMSQKYLGEEFDFHGGGSDLIFPHHENEIAQSEGCSGHHPS--VKYWLHNGFI 262
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I +YN +T+ K F K Y CG T Y+ PHIG+A V D+IRR ++H +
Sbjct: 4 ITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGY-K 62
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKIIN +N + +A RY
Sbjct: 63 VTYVQNFTDVDDKIINTSNGEGVAWDVIANRY 94
>gi|303231487|ref|ZP_07318217.1| cysteine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
gi|302513830|gb|EFL55842.1| cysteine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
Length = 482
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 104/173 (60%), Gaps = 12/173 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY YFE M+ GV RVS IP I I+TL+D AY D VYF V+ F
Sbjct: 93 RYIDSYFEVMDALGVERADVYPRVSTHIPDILKMIETLIDKGYAY-ELDGDVYFSVEKFD 151
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
HY +L GR I K++P DFALWK+AKPGEP++ES WG GRPGWHIECS
Sbjct: 152 HYGELSGRTLDDMEAGARIEVDGRKKNPMDFALWKAAKPGEPFWESPWGNGRPGWHIECS 211
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQS--CAFHNQSQWVNYWLHTGHL 464
AM+ + G + D H GG DL FPHHENE AQS C+ H+ S V YWLH G +
Sbjct: 212 AMSQKYLGEEFDFHGGGSDLIFPHHENEIAQSEGCSGHHPS--VKYWLHNGFI 262
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I +YN +T+ K F K Y CG T Y+ PHIG+A V D+IRR ++H +
Sbjct: 4 ITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGY-K 62
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKIIN +N + +A RY
Sbjct: 63 VTYVQNFTDVDDKIINTSNGEGVAWDVIANRY 94
>gi|146304825|ref|YP_001192141.1| cysteinyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
gi|187631639|sp|A4YIG5.1|SYC_METS5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145703075|gb|ABP96217.1| cysteinyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
Length = 465
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 102/149 (68%), Gaps = 11/149 (7%)
Query: 323 RVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL-------WGRNENITQH 375
+V+ I I F+Q L+D+ AY+ ++ SVYFDVD++P Y +L W + E I +
Sbjct: 111 KVTTHIKEIIDFVQRLIDSGHAYV-ANGSVYFDVDTYPGYGELSNVKKEEWDQGEEIVKE 169
Query: 376 AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKF 435
KR P+DFALWK+ KPGEP++ES WGKGRPGWHIECS M++ + G ++D+H GG+DL F
Sbjct: 170 --KRHPYDFALWKAYKPGEPYWESPWGKGRPGWHIECSTMSTRYLGTKIDIHGGGMDLVF 227
Query: 436 PHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
PHHENE AQ+ + S WV YW+H L
Sbjct: 228 PHHENERAQTESL-TGSTWVKYWMHVAFL 255
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++++N + K F N +K Y CGPTVYD HIGH V D + R L + +
Sbjct: 1 MQVFNTLGKRLQSFEPHEPNTVKMYVCGPTVYDEVHIGHGRTFVAFDAMSRYLRVKGY-N 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + ++TDIDDKIINKA L + + V++ Y
Sbjct: 60 VVRVQNITDIDDKIINKARELGKSWNEVSEYY 91
>gi|357114089|ref|XP_003558833.1| PREDICTED: cysteinyl-tRNA synthetase-like isoform 1 [Brachypodium
distachyon]
Length = 562
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 106/175 (60%), Gaps = 10/175 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E+ M K LPPT RV+E I HI I ++ +AY+ D V+F +DSFP
Sbjct: 138 RFINEFLIDMAKLQCLPPTCEPRVTEHIEHIIDLIAEIIKNDKAYVDGD--VFFSIDSFP 195
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L GRN + KR+ DFALWK+AK GEP++ES WG+GRPGWHIECS
Sbjct: 196 EYNSLSGRNLDDNRPGSRVAVDPRKRNRNDFALWKAAKEGEPFWESPWGRGRPGWHIECS 255
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTD 468
AM++H+ G D+H GG DL FPHHENE AQS A + S+ V W+H G + D
Sbjct: 256 AMSAHYLGHVFDIHGGGKDLIFPHHENELAQSRAAYPDSE-VKCWMHNGFVNKDD 309
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 15 TSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCN 74
T + PK S P + ++N +TK K PF+ + + + Y CG T YD HIGHA
Sbjct: 37 TGEDKPKPSPPQ-----LHLFNSMTKKKEPFVPRVEGKVGMYVCGVTPYDFSHIGHARAY 91
Query: 75 VKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
V D++ R L+ + + + TDIDDKII++AN E +++ R+
Sbjct: 92 VAFDVLYRYLK-FLGYEVEYVRNFTDIDDKIIDRANKAGETVTSLSTRFI 140
>gi|255548846|ref|XP_002515479.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
gi|223545423|gb|EEF46928.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
Length = 563
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 105/169 (62%), Gaps = 9/169 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY E+ M LPP+ VS+ +P I + I+ +LD AY D VYF +D +P
Sbjct: 160 RYCEEFHNDMVYLHCLPPSIEPCVSDHMPQIINMIKQILDNGCAY-RIDGDVYFSIDGYP 218
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR E + + K++P DFALWKSAK GEP++ES WG GRPGWHIECS
Sbjct: 219 EYGKLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECS 278
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM++ + G D+H GG+DL FPHHENE AQSCA S ++YW+H G
Sbjct: 279 AMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACRGSN-ISYWVHNG 326
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 30 TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
T + +YN +++ K F + + + Y CG T YD HIGHA V D++ R L+H +
Sbjct: 69 TELYLYNTMSRNKDLFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYRYLKHLGY 128
Query: 90 IHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKII +AN L ED ++++RY
Sbjct: 129 -DVCYVRNFTDVDDKIIARANELGEDPISLSRRY 161
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 53 LKWYACGPTVYDSPHIGHAVCNVKL-DIIRRILEHYFHIHSIVISSVTDIDDKIINKANS 111
+KWY +V SP + + ++ + R +F + + + SS IDDK+ +
Sbjct: 5 VKWYKPLTSVRLSPPLHSLLRSIPTHRVPTRKRATFFRLFNSLSSSRPLIDDKLNGVDGT 64
Query: 112 LKED-----YKTVA--KRYFLPLIFKILHQKVVG----SIPTRGHAVCNVKLDIIRRILE 160
L Y T++ K F P + + V G + GHA V D++ R L+
Sbjct: 65 LTPSTELYLYNTMSRNKDLFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYRYLK 124
Query: 161 HYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
H + + + TD+DDKII +AN L ED ++++RY
Sbjct: 125 HLGY-DVCYVRNFTDVDDKIIARANELGEDPISLSRRY 161
>gi|357406814|ref|YP_004918738.1| cysteinyl-tRNA synthetase [Methylomicrobium alcaliphilum 20Z]
gi|351719479|emb|CCE25155.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Methylomicrobium
alcaliphilum 20Z]
Length = 462
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 103/165 (62%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E VLPP + ++ IP I + I+ L+ AY+GS+ V++ V F +Y +L G
Sbjct: 98 EDERALSVLPPDIEPKATQSIPEILAMIEKLIANGIAYVGSNGDVFYSVSKFSNYGRLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+N E + K+ P DF LWK+AKPGEP +ES WG+GRPGWHIECSAM++
Sbjct: 158 KNLAELQAGERVEIEQAKQDPLDFVLWKAAKPGEPAWESPWGQGRPGWHIECSAMSTGCL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG+DL+FPHHENE AQS + ++VNYW+H G +R
Sbjct: 218 GNHFDIHGGGMDLQFPHHENEIAQSEGATGE-KFVNYWMHNGFVR 261
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + + Y CG TVYD H+GHA V D++ R L Y
Sbjct: 2 LKIYNTLTRQKELFKPRLEGKAGLYVCGMTVYDYCHVGHARVMVVFDVVARYL-RYLGYS 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ +VTDIDDKII +A ED++++ +R+ +
Sbjct: 61 LTYVRNVTDIDDKIIQRARDNGEDFQSLTERFIEAM 96
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V D++ R L Y + +VTDIDDKII +A ED++++ +R+
Sbjct: 39 GHARVMVVFDVVARYL-RYLGYSLTYVRNVTDIDDKIIQRARDNGEDFQSLTERF 92
>gi|157363627|ref|YP_001470394.1| cysteinyl-tRNA synthetase [Thermotoga lettingae TMO]
gi|229558795|sp|A8F596.1|SYC_THELT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|157314231|gb|ABV33330.1| cysteinyl-tRNA synthetase [Thermotoga lettingae TMO]
Length = 463
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 105/170 (61%), Gaps = 9/170 (5%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
EY+ GV P + + S+F+P I + IQ L+ AY+ D VYF V SFP Y +
Sbjct: 94 EYWRDSMALGVRAPNFSPKTSDFVPEIINAIQNLIAKNHAYV-VDGDVYFSVRSFPRYGE 152
Query: 365 LWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L R+ I + KR P DFALWKSAKPGEP+++S WG GRPGWHIECS M++
Sbjct: 153 LSHRSIDELKAGARIDLNEKKRDPLDFALWKSAKPGEPYWKSPWGNGRPGWHIECSVMST 212
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGT 467
G +D+H GG DL FPHHENE+AQS A ++ +V YWLH G ++ T
Sbjct: 213 KLLGTTLDIHAGGEDLIFPHHENEKAQSEALTGKT-FVKYWLHNGMIKYT 261
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++ YN ++K F ++ Y CGPTVY HIG+A V D +RR LE Y
Sbjct: 1 MRFYNTLSKHIEEFKENEPGIVRMYVCGPTVYGLIHIGNARPMVVFDALRRYLE-YRGYR 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I++ + TDIDDKIINK+ D+K +++ +
Sbjct: 60 VIMVQNFTDIDDKIINKSIEFSVDFKDISETF 91
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 111 SLKEDYKTVAKRYFL-PLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIV 169
KE+ + + Y P ++ ++H G+A V D +RR LE Y I+
Sbjct: 13 EFKENEPGIVRMYVCGPTVYGLIHI---------GNARPMVVFDALRRYLE-YRGYRVIM 62
Query: 170 ISSVTDIDDKIINKANSLKEDYKTVAKRY 198
+ + TDIDDKIINK+ D+K +++ +
Sbjct: 63 VQNFTDIDDKIINKSIEFSVDFKDISETF 91
>gi|114330220|ref|YP_746442.1| cysteinyl-tRNA synthetase [Nitrosomonas eutropha C91]
gi|122314719|sp|Q0AJJ4.1|SYC_NITEC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|114307234|gb|ABI58477.1| cysteinyl-tRNA synthetase [Nitrosomonas eutropha C91]
Length = 467
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 107/171 (62%), Gaps = 12/171 (7%)
Query: 306 YFESMEK----FGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y ++ME+ G++ P+ R +E I + + I++LL AY+ ++ V++DV FP
Sbjct: 92 YIQAMEEDAAALGIISPSFEPRATECIESMVTMIESLLSKGLAYVANNGDVFYDVRRFPG 151
Query: 362 YFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
Y KL G++ E + KR P DF LWK+AKP EP ++S WGKGRPGWHIECSA
Sbjct: 152 YGKLSGKSLDDLRAGERVEIDTNKRDPLDFVLWKAAKPDEPSWDSPWGKGRPGWHIECSA 211
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
M+ H+ G + D+H GG DL+FPHHENE AQS H VNYW+H G +R
Sbjct: 212 MSGHYLGERFDIHGGGQDLQFPHHENEIAQSEGVHGHPH-VNYWMHNGFVR 261
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIY+ +T+++ FI +K Y CG TVYD H+GHA V D + R L+
Sbjct: 2 LKIYDTLTRSRREFIPLTPGKVKMYVCGMTVYDHCHLGHARVLVVFDSVVRWLQ-TLDYE 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TDIDDKII +A E + + RY +
Sbjct: 61 VTYVRNITDIDDKIIRRALENHEPFGALTARYIQAM 96
>gi|88941991|sp|Q65UY1.2|SYC_MANSM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 458
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 100/167 (59%), Gaps = 8/167 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R ++ IP I + ++TL+ AY+ D V FDV+SF Y
Sbjct: 95 EMHKDFDALNILRPDVEPRATKHIPEIIAMVETLIRRGHAYVAEDGDVMFDVESFQKYGA 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q +VK++P DF LWK +KP EP ++S WGKGRPGWHIECSAM
Sbjct: 155 LSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMND 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG DL FPHHENE AQSC H+ ++VNYWLHTG L
Sbjct: 215 KELGNHFDIHGGGSDLMFPHHENEIAQSCCAHD-GEYVNYWLHTGML 260
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KI+N +T+ K F N N + Y CG TVYD H GH V D+I R L Y
Sbjct: 2 LKIFNTLTREKEEFKPINPNKVGMYVCGVTVYDLCHFGHGRTFVSFDVITRYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TD+DDKII +A E + +R +
Sbjct: 61 LRYVRNITDVDDKIIKRALENNETCDQLVERMIAEM 96
>gi|269861043|ref|XP_002650237.1| cysteinyl-tRNA synthetase [Enterocytozoon bieneusi H348]
gi|220066327|gb|EED43813.1| cysteinyl-tRNA synthetase [Enterocytozoon bieneusi H348]
Length = 500
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 118/206 (57%), Gaps = 23/206 (11%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E+F+ M+K V P TRV+E IP I +FIQ L + Y+ S+ SVYFD+ +
Sbjct: 97 YEKEFFDDMDKLKVKRPDFITRVTEHIPQIINFIQKLENNGLTYV-SNGSVYFDLKKYKK 155
Query: 362 YFKL-WGRNENITQHAV-----------KRSPFDFALWKSA-KPGEPWYESAWGKGRPGW 408
FK R I QH + K+S DFALWK+ E + S WG+GRPGW
Sbjct: 156 IFKYNVLRLSGIEQHLIDTTVKSIISTEKKSLDDFALWKNVVNKDELKFHSPWGEGRPGW 215
Query: 409 HIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTD 468
HIECS M++H FG ++D+H GGIDL FPHHENE AQ + N + WV Y+LHTGHL D
Sbjct: 216 HIECSVMSTHIFGSKLDIHGGGIDLMFPHHENEIAQCQGYFNDT-WVKYFLHTGHL-NID 273
Query: 469 GTRR-------LRAARFITNLSGSTI 487
G + L + I N SG TI
Sbjct: 274 GRKMSKSLKNFLTISEIINNYSGITI 299
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 43/60 (71%)
Query: 29 DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
+ I +Y+ I+K K+ FI + ++K Y CGPTVYDSPHIGHA + DIIR+ILE+YF
Sbjct: 3 NKSILLYDSISKKKIEFIPDDPTNVKMYVCGPTVYDSPHIGHARTYISFDIIRKILENYF 62
>gi|386818264|ref|ZP_10105482.1| cysteinyl-tRNA synthetase [Thiothrix nivea DSM 5205]
gi|386422840|gb|EIJ36675.1| cysteinyl-tRNA synthetase [Thiothrix nivea DSM 5205]
Length = 461
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 100/182 (54%), Gaps = 12/182 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E VL P R + IP + + IQTLLD AY GS+ VY+DV F Y KL G
Sbjct: 98 EDEAALNVLRPDDEPRATSNIPEMLAMIQTLLDKGLAYQGSNGDVYYDVSKFDGYGKLSG 157
Query: 368 R-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
R E + +K P DF LWK++KPGEP +++ WG GRPGWHIECSAM+
Sbjct: 158 RKLEDMRAGERVAVDEIKDDPMDFVLWKASKPGEPAWDAPWGAGRPGWHIECSAMSQKLL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS--CAFHNQSQWVNYWLHTGHLRGTDGTRRLRAARF 478
G D+H GG DL+FPHHENE AQS C H VNYW+H G +R D F
Sbjct: 218 GDHFDIHGGGSDLQFPHHENEIAQSEGCTGHKH---VNYWMHNGFIRVNDEKMSKSLGNF 274
Query: 479 IT 480
T
Sbjct: 275 FT 276
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ IYN +T+ K F + + Y CG TVYD H+GHA V D + R L+ ++
Sbjct: 2 LHIYNSLTRQKETFHPIHPRQVFMYVCGMTVYDYCHLGHARVMVVFDTVYRYLKASGYLV 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
V ++TDIDDKII +A E + + R+
Sbjct: 62 QYV-RNITDIDDKIIKRAAENGEPIEALTARFI 93
>gi|222612964|gb|EEE51096.1| hypothetical protein OsJ_31805 [Oryza sativa Japonica Group]
Length = 561
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 114/184 (61%), Gaps = 10/184 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E+ M + LPPT RV++ I I I ++D +AY + VYF VD+FP
Sbjct: 152 RFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDLITKIMDNGKAYT-IEGDVYFSVDNFP 210
Query: 361 HYFKLWGR--NEN-----ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L GR ++N + A KR+P DFALWKSAK GEP +ES WG+GRPGWHIECS
Sbjct: 211 DYLSLSGRKVDQNRPGTRVAVDARKRNPADFALWKSAKEGEPSWESPWGRGRPGWHIECS 270
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
AM++H+ G D+H GG DL FPHHENE AQS A + +S+ V W+H G + DG +
Sbjct: 271 AMSAHYLGNIFDIHGGGKDLIFPHHENELAQSQAAYPESE-VKCWMHNGFV-NKDGQKMA 328
Query: 474 RAAR 477
+A +
Sbjct: 329 KADK 332
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 106/252 (42%), Gaps = 56/252 (22%)
Query: 18 ESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
E P+ P+ +++++ TK VPF + + + Y CG T YD H+GHA V
Sbjct: 11 EEPRGKRPAAE---LRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAF 67
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVV 137
D++ R L++ + +II +AN ED +++ R F+ + +++ +
Sbjct: 68 DVLFRYLKY--------------LGFEIIKRANEAGEDALSLSSR-FIDEFHRDMYE--L 110
Query: 138 GSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKR 197
+P R+ +H I + D+ KII +AN ED +++ R
Sbjct: 111 QCLPPTHEP----------RVTKH--------IEQIIDLITKIIKRANEAGEDALSLSSR 152
Query: 198 Y---FLRLIFKI-----LHQKVVRK---LAIDLKKAKVDSGPVLT-------KCDEFRDE 239
+ F R ++++ H+ V K IDL +D+G T D F D
Sbjct: 153 FIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDLITKIMDNGKAYTIEGDVYFSVDNFPDY 212
Query: 240 LLALGVQIKDQK 251
L G ++ +
Sbjct: 213 LSLSGRKVDQNR 224
>gi|218184692|gb|EEC67119.1| hypothetical protein OsI_33924 [Oryza sativa Indica Group]
Length = 523
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 114/184 (61%), Gaps = 10/184 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E+ M + LPPT RV++ I I I ++D +AY + VYF VD+FP
Sbjct: 111 RFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDLITKIMDNGKAYT-IEGDVYFSVDNFP 169
Query: 361 HYFKLWGR--NEN-----ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L GR ++N + A KR+P DFALWKSAK GEP +ES WG+GRPGWHIECS
Sbjct: 170 DYLSLSGRKVDQNRPGTRVAVDARKRNPADFALWKSAKEGEPSWESPWGRGRPGWHIECS 229
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
AM++H+ G D+H GG DL FPHHENE AQS A + +S+ V W+H G + DG +
Sbjct: 230 AMSAHYLGNIFDIHGGGKDLIFPHHENELAQSQAAYPESE-VKCWMHNGFV-NKDGQKMA 287
Query: 474 RAAR 477
+A +
Sbjct: 288 KADK 291
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 18 ESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
E P+ P+ +++++ TK VPF + + + Y CG T YD H+GHA V
Sbjct: 11 EEPRGKRPAAE---LRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAF 67
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
D++ R L+ Y + + TDIDDKII +AN ED +++ R+
Sbjct: 68 DVLFRYLK-YLGYEVNYVRNFTDIDDKIIKRANEAGEDALSLSSRFI 113
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 23/159 (14%)
Query: 115 DYKTVAKRYFLPLIFKILHQKVVGSIPTR----GHAVCNVKLDIIRRILEHYFHIHSIVI 170
D +T A F P + + V G P GHA V D++ R L+ Y +
Sbjct: 26 DTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLK-YLGYEVNYV 84
Query: 171 SSVTDIDDKIINKANSLKEDYKTVAKRY---FLRLIFKI-----LHQKVVRK---LAIDL 219
+ TDIDDKII +AN ED +++ R+ F R ++++ H+ V K IDL
Sbjct: 85 RNFTDIDDKIIKRANEAGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDL 144
Query: 220 KKAKVDSGPVLT-------KCDEFRDELLALGVQIKDQK 251
+D+G T D F D L G ++ +
Sbjct: 145 ITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNR 183
>gi|345862869|ref|ZP_08815083.1| cysteine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345126211|gb|EGW56077.1| cysteine--tRNA ligase [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 461
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 99/168 (58%), Gaps = 8/168 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E GVLPP R + + I IQ L+D AY + VY+DV SFP Y KL G
Sbjct: 98 EDATALGVLPPDDEPRATGHMKEILVMIQRLIDNGHAYAVENGDVYYDVRSFPDYGKLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ + +KR P DFALWKSAKPGEP ++S WG+GRPGWHIECSAM++
Sbjct: 158 KSIDDLESGARVEVDEIKRDPLDFALWKSAKPGEPAWDSPWGQGRPGWHIECSAMSTCAL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTD 468
G D+H GG DL FPHHENE AQS S +V YW+H G +R D
Sbjct: 218 GDSFDIHGGGADLTFPHHENEIAQSEGATGHS-FVKYWMHNGFVRIND 264
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN + K F + ++ Y CG TVYD H+GHA V D++ R L+ +
Sbjct: 2 LKIYNDLNNRKEEFKPLEEGRVRMYVCGMTVYDLCHLGHARVMVVFDVVYRYLKAMGY-E 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
I ++TDIDDKIIN+AN E + + +R+ +
Sbjct: 61 VTYIRNITDIDDKIINRANENGEPFMALTERFIQAM 96
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 104 KIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRILEHYF 163
KI N N+ KE++K + + + + V + GHA V D++ R L+
Sbjct: 3 KIYNDLNNRKEEFKPLEEGRVRMYVCGM----TVYDLCHLGHARVMVVFDVVYRYLKAMG 58
Query: 164 HIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 199
+ I ++TDIDDKIIN+AN E + + +R+
Sbjct: 59 Y-EVTYIRNITDIDDKIINRANENGEPFMALTERFI 93
>gi|297610616|ref|NP_001064785.2| Os10g0463100 [Oryza sativa Japonica Group]
gi|22758318|gb|AAN05522.1| putative cysteinyl-tRNA synthetase [Oryza sativa Japonica Group]
gi|255679472|dbj|BAF26699.2| Os10g0463100 [Oryza sativa Japonica Group]
Length = 520
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 114/184 (61%), Gaps = 10/184 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E+ M + LPPT RV++ I I I ++D +AY + VYF VD+FP
Sbjct: 111 RFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDLITKIMDNGKAYT-IEGDVYFSVDNFP 169
Query: 361 HYFKLWGR--NEN-----ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L GR ++N + A KR+P DFALWKSAK GEP +ES WG+GRPGWHIECS
Sbjct: 170 DYLSLSGRKVDQNRPGTRVAVDARKRNPADFALWKSAKEGEPSWESPWGRGRPGWHIECS 229
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
AM++H+ G D+H GG DL FPHHENE AQS A + +S+ V W+H G + DG +
Sbjct: 230 AMSAHYLGNIFDIHGGGKDLIFPHHENELAQSQAAYPESE-VKCWMHNGFV-NKDGQKMA 287
Query: 474 RAAR 477
+A +
Sbjct: 288 KADK 291
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 18 ESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
E P+ P+ +++++ TK VPF + + + Y CG T YD H+GHA V
Sbjct: 11 EEPRGKRPAAE---LRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAF 67
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
D++ R L+ Y + + TDIDDKII +AN ED +++ R+
Sbjct: 68 DVLFRYLK-YLGYEVNYVRNFTDIDDKIIKRANEAGEDALSLSSRFI 113
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 23/159 (14%)
Query: 115 DYKTVAKRYFLPLIFKILHQKVVGSIPTR----GHAVCNVKLDIIRRILEHYFHIHSIVI 170
D +T A F P + + V G P GHA V D++ R L+ Y +
Sbjct: 26 DTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLK-YLGYEVNYV 84
Query: 171 SSVTDIDDKIINKANSLKEDYKTVAKRY---FLRLIFKI-----LHQKVVRK---LAIDL 219
+ TDIDDKII +AN ED +++ R+ F R ++++ H+ V K IDL
Sbjct: 85 RNFTDIDDKIIKRANEAGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDL 144
Query: 220 KKAKVDSGPVLT-------KCDEFRDELLALGVQIKDQK 251
+D+G T D F D L G ++ +
Sbjct: 145 ITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNR 183
>gi|344284675|ref|XP_003414090.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial-like
[Loxodonta africana]
Length = 664
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 104/165 (63%), Gaps = 2/165 (1%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE ++ + M VLPPT RV+E IP I SFI+ ++ AY S VY D +
Sbjct: 253 YEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIANGHAYSTSKGRVYIKTDDCKY 312
Query: 362 YFKLWGRNENITQH--AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHF 419
L ++ I Q + KR DFALWK++KP E ++ S WG GRPGWHIECS M+S
Sbjct: 313 DKMLTVVDDPIGQSIDSDKRHSSDFALWKASKPQEIFWTSPWGLGRPGWHIECSTMSSLI 372
Query: 420 FGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG Q+D+H+GGIDL FPHHENE AQ AFH QW NY+LH+GHL
Sbjct: 373 FGSQLDIHSGGIDLAFPHHENEIAQCEAFHQCKQWGNYFLHSGHL 417
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 68/102 (66%)
Query: 22 WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
W P+G+DTG+++YN +T+ K PFI+ N WY+CGPTVYD H+GHA V+ DIIR
Sbjct: 152 WLPPTGHDTGVQVYNSLTRRKDPFIVANAEAASWYSCGPTVYDHAHLGHACSYVRFDIIR 211
Query: 82 RILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
R+L F + I++ VTDIDDKII +A+ + ++A Y
Sbjct: 212 RLLTRVFGCNIIMVMGVTDIDDKIIRRASEMNISPTSLASFY 253
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRR+L F + I++ VTDIDDKII +A+ + ++A Y
Sbjct: 199 GHACSYVRFDIIRRLLTRVFGCNIIMVMGVTDIDDKIIRRASEMNISPTSLASFY 253
>gi|357114091|ref|XP_003558834.1| PREDICTED: cysteinyl-tRNA synthetase-like isoform 2 [Brachypodium
distachyon]
Length = 548
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 106/175 (60%), Gaps = 10/175 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E+ M K LPPT RV+E I HI I ++ +AY+ D V+F +DSFP
Sbjct: 138 RFINEFLIDMAKLQCLPPTCEPRVTEHIEHIIDLIAEIIKNDKAYVDGD--VFFSIDSFP 195
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L GRN + KR+ DFALWK+AK GEP++ES WG+GRPGWHIECS
Sbjct: 196 EYNSLSGRNLDDNRPGSRVAVDPRKRNRNDFALWKAAKEGEPFWESPWGRGRPGWHIECS 255
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTD 468
AM++H+ G D+H GG DL FPHHENE AQS A + S+ V W+H G + D
Sbjct: 256 AMSAHYLGHVFDIHGGGKDLIFPHHENELAQSRAAYPDSE-VKCWMHNGFVNKDD 309
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 15 TSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCN 74
T + PK S P + ++N +TK K PF+ + + + Y CG T YD HIGHA
Sbjct: 37 TGEDKPKPSPPQ-----LHLFNSMTKKKEPFVPRVEGKVGMYVCGVTPYDFSHIGHARAY 91
Query: 75 VKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
V D++ R L+ + + + TDIDDKII++AN E +++ R+
Sbjct: 92 VAFDVLYRYLK-FLGYEVEYVRNFTDIDDKIIDRANKAGETVTSLSTRFI 140
>gi|108706130|gb|ABF93925.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|108706131|gb|ABF93926.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|218192068|gb|EEC74495.1| hypothetical protein OsI_09969 [Oryza sativa Indica Group]
gi|222624173|gb|EEE58305.1| hypothetical protein OsJ_09367 [Oryza sativa Japonica Group]
Length = 528
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/187 (44%), Positives = 112/187 (59%), Gaps = 9/187 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E+ M + LPPT RV++ I HI I +++ +AY + VYF VD+FP
Sbjct: 100 RFINEFLLDMAQLQCLPPTCEPRVTDHIEHIIELITKIMENGKAY-AMEGDVYFSVDTFP 158
Query: 361 HYFKLWGR--NENITQHAV-----KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L GR + N+ V KR+P DFALWK+AK GEP+++S WG+GRPGWHIECS
Sbjct: 159 EYLSLSGRKLDHNLAGSRVAVDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECS 218
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
AM++H+ G D+H GG DL FPHHENE AQS A + +S+ V W+H G + D
Sbjct: 219 AMSAHYLGHVFDIHGGGKDLIFPHHENELAQSRAAYPESE-VKCWMHNGFVNKDDQKMSK 277
Query: 474 RAARFIT 480
F T
Sbjct: 278 SDKNFFT 284
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++++N +TK K F + ++ Y CG T YD HIGHA V D++ R L+ +
Sbjct: 11 LELFNSMTKKKELFEPLVEGKVRMYVCGVTPYDFSHIGHARAYVAFDVLYRYLK-FLGYE 69
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TDIDDKII +AN E +++ R+
Sbjct: 70 VEYVRNFTDIDDKIIKRANEAGETVTSLSSRF 101
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPTR----GHAVCNVKLDIIRRILEHYFHIHSIVISSV 173
T K F PL+ + V G P GHA V D++ R L+ + + +
Sbjct: 18 TKKKELFEPLVEGKVRMYVCGVTPYDFSHIGHARAYVAFDVLYRYLK-FLGYEVEYVRNF 76
Query: 174 TDIDDKIINKANSLKEDYKTVAKRYFLRLIFKI 206
TDIDDKII +AN E +++ R+ + +
Sbjct: 77 TDIDDKIIKRANEAGETVTSLSSRFINEFLLDM 109
>gi|345876724|ref|ZP_08828488.1| cobyrinic acid a,c-diamide synthase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344226223|gb|EGV52562.1| cobyrinic acid a,c-diamide synthase [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 482
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 101/180 (56%), Gaps = 8/180 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E GVLPP R + + I IQ L+D AY + VY+DV SFP Y KL G
Sbjct: 119 EDATALGVLPPDDEPRATGHMKEILVMIQRLIDNGHAYAVENGDVYYDVRSFPDYGKLSG 178
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ + +KR P DFALWKSAKPGEP ++S WG+GRPGWHIECSAM++
Sbjct: 179 KSIDDLESGARVEVDEIKRDPLDFALWKSAKPGEPAWDSPWGQGRPGWHIECSAMSTCAL 238
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAARFIT 480
G D+H GG DL FPHHENE AQS S +V YW+H G +R D F T
Sbjct: 239 GDSFDIHGGGADLTFPHHENEIAQSEGATGHS-FVKYWMHNGFVRINDEKMSKSLGNFFT 297
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 30 TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
T +KIYN + K F + ++ Y CG TVYD H+GHA V D++ R L+ +
Sbjct: 21 TMLKIYNDLNNRKEEFKPLEEGRVRMYVCGMTVYDLCHLGHARVMVVFDVVYRYLKAMGY 80
Query: 90 IHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
I ++TDIDDKIIN+AN E + + +R+ +
Sbjct: 81 -EVTYIRNITDIDDKIINRANENGEPFMALTERFIQAM 117
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 104 KIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRILEHYF 163
KI N N+ KE++K + + + + V + GHA V D++ R L+
Sbjct: 24 KIYNDLNNRKEEFKPLEEGRVRMYVCGM----TVYDLCHLGHARVMVVFDVVYRYLKAMG 79
Query: 164 HIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 199
+ I ++TDIDDKIIN+AN E + + +R+
Sbjct: 80 Y-EVTYIRNITDIDDKIINRANENGEPFMALTERFI 114
>gi|152979432|ref|YP_001345061.1| cysteinyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
gi|187629819|sp|A6VQ79.1|SYC_ACTSZ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|150841155|gb|ABR75126.1| cysteinyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
Length = 459
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/167 (47%), Positives = 100/167 (59%), Gaps = 8/167 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R ++ IP I + + LL AY+ +D V FDV+SF Y
Sbjct: 95 EMHKDFDALNILRPDAEPRATKHIPEIIAMVDALLQRGHAYLAADGDVMFDVESFQKYGA 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q +VK++P DF LWK +KP EP ++S WGKGRPGWHIECSAM S
Sbjct: 155 LSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG DL FPHHENE AQSC H+ ++VNYWLHTG L
Sbjct: 215 KELGNHFDIHGGGSDLMFPHHENEIAQSCCAHD-GEYVNYWLHTGML 260
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KI+N +T+ K F N+N + Y CG TVYD H GH V D+I R L + +
Sbjct: 2 LKIFNTLTREKEEFKPINQNQVGMYVCGVTVYDLCHFGHGRTFVSFDVITRYL-RFLGYN 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TD+DDKII +A E + +R +
Sbjct: 61 LRYVRNITDVDDKIIKRALENNETCDQLVERMIAEM 96
>gi|343506381|ref|ZP_08743870.1| cysteinyl-tRNA synthetase [Vibrio ichthyoenteri ATCC 700023]
gi|342802714|gb|EGU38117.1| cysteinyl-tRNA synthetase [Vibrio ichthyoenteri ATCC 700023]
Length = 460
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 97/152 (63%), Gaps = 8/152 (5%)
Query: 318 PTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENITQ--- 374
P R +EFIP I + ++ L++ AY+ S+ V F+V F Y KL ++ + Q
Sbjct: 108 PDIEPRATEFIPEIIALVEKLIERGFAYVASNGDVMFEVSKFDEYGKLSKQDLDQLQAGA 167
Query: 375 ----HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGG 430
+ KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S G D+H GG
Sbjct: 168 RVDVESAKRSPLDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSAILGNHFDIHGGG 227
Query: 431 IDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
DL+FPHHENE AQSC HN +Q+VN W+H+G
Sbjct: 228 SDLQFPHHENEIAQSCCAHN-TQYVNTWMHSG 258
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F N + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +AN E +++ +R
Sbjct: 61 LTFVRNITDIDDKIIKRANENGESCESLTER 91
>gi|282850303|ref|ZP_06259682.1| cysteine--tRNA ligase [Veillonella parvula ATCC 17745]
gi|294793811|ref|ZP_06758948.1| cysteine--tRNA ligase [Veillonella sp. 3_1_44]
gi|282579796|gb|EFB85200.1| cysteine--tRNA ligase [Veillonella parvula ATCC 17745]
gi|294455381|gb|EFG23753.1| cysteine--tRNA ligase [Veillonella sp. 3_1_44]
Length = 482
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 100/171 (58%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY YFE M+ GV RVS I I + IQTL+D AY D VY+ V+ F
Sbjct: 93 RYIDSYFEVMDALGVQRADIYPRVSTHIDDIIAMIQTLIDKGYAY-ELDGDVYYSVEKFE 151
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
HY +L GR I K++P DFALWK+AKPGEP++ES WG GRPGWHIECS
Sbjct: 152 HYGELSGRTLDDMEAGARIEVDGRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECS 211
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM+ + G + D H GG DL FPHHENE AQS Q V YWLH G +
Sbjct: 212 AMSQKYLGTEFDFHGGGSDLIFPHHENEIAQSEGCSGQHPAVRYWLHNGFI 262
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I +YN +T+ K F K Y CG T Y+ PHIG+A V D+IRR ++H +
Sbjct: 4 ITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGY-K 62
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKIIN +N + T+A RY
Sbjct: 63 VTYVQNFTDVDDKIINTSNGEGVSWDTIANRY 94
>gi|325829816|ref|ZP_08163274.1| cysteine--tRNA ligase [Eggerthella sp. HGA1]
gi|325487983|gb|EGC90420.1| cysteine--tRNA ligase [Eggerthella sp. HGA1]
Length = 501
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 102/177 (57%), Gaps = 15/177 (8%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y + E M GVL P + +E IP + IQ L+D AY +D VYF+V SFP
Sbjct: 92 YTEAFIEDMRAAGVLDPDIRPKATEEIPAMIELIQELIDGGHAY-DADGDVYFNVRSFPA 150
Query: 362 YFKLWGRNENITQHA-------------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGW 408
Y +L GRN + + KR P DFALWK+AKPGEP +ES WG GRPGW
Sbjct: 151 YGELSGRNVDEMESGHRELRADGKGVEDRKRDPLDFALWKAAKPGEPAWESPWGMGRPGW 210
Query: 409 HIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
HIECSAM+ + G D+H GG DL FPHHENE AQS A + NYW+H G L+
Sbjct: 211 HIECSAMSRKYLGLPFDIHGGGADLVFPHHENERAQSEAACG-CTFANYWMHGGMLQ 266
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I++YN T+TKV F + + Y CGPTVY+ HIG+A + D+IRR L +
Sbjct: 2 IRLYNTKTRTKVDFETLERGKVGMYVCGPTVYNYIHIGNARTFISFDVIRRYL-MWRGFD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ +VTD+DDKII K+ VA Y
Sbjct: 61 VTFVQNVTDVDDKIIGKSLEEGRSAAEVAAEY 92
>gi|257791977|ref|YP_003182583.1| cysteinyl-tRNA synthetase [Eggerthella lenta DSM 2243]
gi|317489986|ref|ZP_07948478.1| cysteinyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
gi|257475874|gb|ACV56194.1| cysteinyl-tRNA synthetase [Eggerthella lenta DSM 2243]
gi|316910984|gb|EFV32601.1| cysteinyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
Length = 501
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 102/177 (57%), Gaps = 15/177 (8%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y + E M GVL P + +E IP + IQ L+D AY +D VYF+V SFP
Sbjct: 92 YTEAFIEDMRAAGVLDPDIRPKATEEIPAMIELIQELIDGGHAY-DADGDVYFNVRSFPA 150
Query: 362 YFKLWGRNENITQHA-------------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGW 408
Y +L GRN + + KR P DFALWK+AKPGEP +ES WG GRPGW
Sbjct: 151 YGELSGRNVDEMESGHRELRADGKGVEDRKRDPLDFALWKAAKPGEPAWESPWGMGRPGW 210
Query: 409 HIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
HIECSAM+ + G D+H GG DL FPHHENE AQS A + NYW+H G L+
Sbjct: 211 HIECSAMSRKYLGLPFDIHGGGADLVFPHHENERAQSEAACG-CTFANYWMHGGMLQ 266
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I++YN T+TKV F + + Y CGPTVY+ HIG+A + D+IRR L +
Sbjct: 2 IRLYNTKTRTKVDFETLERGKVGMYVCGPTVYNYIHIGNARTFISFDVIRRYL-MWRGFD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ +VTD+DDKII K+ VA Y
Sbjct: 61 VTFVQNVTDVDDKIIGKSLEEGRSAAEVAAEY 92
>gi|296082122|emb|CBI21127.3| unnamed protein product [Vitis vinifera]
Length = 474
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 105/169 (62%), Gaps = 9/169 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY E+ M LPP+ VS+ +P I I+ ++D AY + VYF VD FP
Sbjct: 67 RYCQEFHVDMTYLHCLPPSVEPCVSDHMPQIIDMIKQIIDNDCAY-RVEGDVYFSVDKFP 125
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L GR E + + K++P DFALWK+AK GEP+++S WG GRPGWHIECS
Sbjct: 126 EYGRLSGRKVEDNRAGERVAVDSRKKNPADFALWKAAKKGEPFWDSPWGPGRPGWHIECS 185
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM++ + G D+H GG+DL FPHHENE AQSCA QS ++YW+H G
Sbjct: 186 AMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACKQSN-ISYWIHNG 233
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKED 115
Y CG T YD HIGHA V D++ R L H + + TD+DDKII +AN + ED
Sbjct: 2 YVCGVTAYDLSHIGHARVYVSFDVLYRYLRH-LEYEVNYVRNFTDVDDKIIARANEMGED 60
Query: 116 YKTVAKRY 123
+++RY
Sbjct: 61 PINLSRRY 68
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V D++ R L H + + TD+DDKII +AN + ED +++RY
Sbjct: 15 GHARVYVSFDVLYRYLRH-LEYEVNYVRNFTDVDDKIIARANEMGEDPINLSRRY 68
>gi|343513226|ref|ZP_08750335.1| cysteinyl-tRNA synthetase [Vibrio scophthalmi LMG 19158]
gi|342793531|gb|EGU29323.1| cysteinyl-tRNA synthetase [Vibrio scophthalmi LMG 19158]
Length = 460
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 97/152 (63%), Gaps = 8/152 (5%)
Query: 318 PTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENITQ--- 374
P R +EFIP I + ++ L++ AY+ S+ V F+V F Y KL ++ + Q
Sbjct: 108 PDIEPRATEFIPEIIALVEKLIERGFAYVASNGDVMFEVSKFDEYGKLSKQDLDQLQAGA 167
Query: 375 ----HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGG 430
+ KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S G D+H GG
Sbjct: 168 RVDIESAKRSPLDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSAILGNHFDIHGGG 227
Query: 431 IDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
DL+FPHHENE AQSC HN +Q+VN W+H+G
Sbjct: 228 SDLQFPHHENEIAQSCCAHN-TQYVNTWMHSG 258
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F N + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +AN E +++ +R
Sbjct: 61 LTFVRNITDIDDKIIKRANENGESCESLTER 91
>gi|221043810|dbj|BAH13582.1| unnamed protein product [Homo sapiens]
Length = 341
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 106/176 (60%), Gaps = 4/176 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ + M VLPPT RV+E IP SFI+ ++ AY + +VYFD+ S
Sbjct: 30 YEEDFKQDMAALKVLPPTVYLRVTENIPQTISFIEGIIARGNAYSTAKGNVYFDLKSRGD 89
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G KR DFALWK+AKP E ++ S WG GRPGWHIECSA+AS
Sbjct: 90 KYGKLVGVVPGPVGEPADSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIAS 149
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
FG Q+D+H+GGIDL FPHHENE AQ FH QW NY+LH+GHL ++
Sbjct: 150 MVFGSQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGHLHAKGKEEKM 205
>gi|343514072|ref|ZP_08751154.1| cysteinyl-tRNA synthetase [Vibrio sp. N418]
gi|342800738|gb|EGU36249.1| cysteinyl-tRNA synthetase [Vibrio sp. N418]
Length = 460
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 97/152 (63%), Gaps = 8/152 (5%)
Query: 318 PTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENITQ--- 374
P R +EFIP I + ++ L++ AY+ S+ V F+V F Y KL ++ + Q
Sbjct: 108 PDIEPRATEFIPEIIALVEKLIERGFAYVASNGDVMFEVSKFDEYGKLSKQDLDQLQAGA 167
Query: 375 ----HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGG 430
+ KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S G D+H GG
Sbjct: 168 RVDIESAKRSPLDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSAILGNHFDIHGGG 227
Query: 431 IDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
DL+FPHHENE AQSC HN +Q+VN W+H+G
Sbjct: 228 SDLQFPHHENEIAQSCCAHN-TQYVNTWMHSG 258
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F N + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +AN E +++ +R
Sbjct: 61 LTFVRNITDIDDKIIKRANENGESCESLTER 91
>gi|406914965|gb|EKD54097.1| hypothetical protein ACD_60C00124G0002 [uncultured bacterium]
Length = 458
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 105/172 (61%), Gaps = 8/172 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ + E MEK +L P + + +EFI I S I+ L+ + AYI S+ VY+DV F
Sbjct: 91 RFTKAFHEDMEKLNLLSPDQEPKATEFIQPIISMIEKLISNQLAYIASNGDVYYDVRKFS 150
Query: 361 HYFKLWGRNENITQHA-------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L RN + + VKR P DF LWK AKP EP +ES +G GRPGWHIECS
Sbjct: 151 GYGSLSHRNVDDLESGARVEISDVKRDPLDFVLWKMAKPNEPAWESPFGLGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
AM+++ G D H GG DL FPHHENE AQS ++ ++VNYWLH G+L+
Sbjct: 211 AMSTNLLGAHFDFHGGGKDLIFPHHENEIAQSEGATDK-KFVNYWLHAGYLQ 261
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++IYN +T K F K Y CGPTVYD H+G+A D++ R L Y
Sbjct: 2 LQIYNSLTHKKEIFEPLQKGKAAIYVCGPTVYDYCHLGNARSFAAFDVVVRYL-RYSGYT 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ ++TDIDDKII +A E + V R+
Sbjct: 61 VTYVRNITDIDDKIIKRAAEKNESFSEVVTRF 92
>gi|157962505|ref|YP_001502539.1| cysteinyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
gi|187631637|sp|A8H617.1|SYC_SHEPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|157847505|gb|ABV88004.1| cysteinyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
Length = 459
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + P R + +P I ++ L++ + AY+ S+ V F V SFP Y +
Sbjct: 95 EMHRDFDALNMARPDNEPRATLHMPEIIEMVEKLIEREHAYVASNGDVLFSVSSFPEYGR 154
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L G+N Q KR P DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSGQNLEQLQAGARVEVEDAKRDPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ + +VNYW+HTG
Sbjct: 215 KHLGNHFDIHGGGSDLQFPHHENEIAQSCCAHD-TPYVNYWMHTG 258
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T+ K F+ + Y CG T+YD HIGH V D+I R L Y
Sbjct: 2 LKLYNSLTRQKEQFVPLQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYL-RYSGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
++TD+DDKII +AN KE ++ +R
Sbjct: 61 VNFQRNITDVDDKIIKRANENKESCDSLTER 91
>gi|82703002|ref|YP_412568.1| cysteinyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
gi|109894912|sp|Q2Y7U5.1|SYC_NITMU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|82411067|gb|ABB75176.1| cysteinyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
Length = 464
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 106/186 (56%), Gaps = 12/186 (6%)
Query: 306 YFESMEK----FGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+ ++ME+ GV PP+ R + + + + IQ L+D K AY S+ VY+ V FP
Sbjct: 92 FIQAMEEDAAALGVEPPSWEPRATRHVEDMIAMIQVLVDKKLAYPASNGDVYYAVHRFPG 151
Query: 362 YFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
Y KL G++ E + K P DF LWK+AKPGEP ++S WG GRPGWHIECSA
Sbjct: 152 YGKLSGKSLDELRAGERVIVDPHKNDPLDFVLWKAAKPGEPQWDSPWGPGRPGWHIECSA 211
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLR 474
M H+ G D+H GG DL+FPHHENE AQS H +VNYW+H G +R D
Sbjct: 212 MGEHYLGEHFDIHGGGQDLQFPHHENEIAQSEGAHGHP-FVNYWMHNGFVRVNDEKMSKS 270
Query: 475 AARFIT 480
F T
Sbjct: 271 LGNFFT 276
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILE-HYFHI 90
+KI+N + + K FI +K Y CG TVYD H+GHA V D+++R + F +
Sbjct: 2 LKIHNSLAREKQEFIPLTPGKVKVYVCGMTVYDYCHLGHARVMVVFDMVQRWFRANRFDV 61
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ ++TDIDDKII +A KE + + R+
Sbjct: 62 --TYVRNITDIDDKIIRRAQENKESIEALTARF 92
>gi|269798076|ref|YP_003311976.1| cysteinyl-tRNA synthetase [Veillonella parvula DSM 2008]
gi|269094705|gb|ACZ24696.1| cysteinyl-tRNA synthetase [Veillonella parvula DSM 2008]
Length = 482
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 100/171 (58%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY YFE M+ GV RVS I I + IQTL+D AY D VY+ V+ F
Sbjct: 93 RYIDSYFEVMDALGVQRADIYPRVSTHIEDIITMIQTLIDKGYAY-ELDGDVYYSVEKFE 151
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
HY +L GR I K++P DFALWK+AKPGEP++ES WG GRPGWHIECS
Sbjct: 152 HYGELSGRTLDDMEAGARIEVDGRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECS 211
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM+ + G + D H GG DL FPHHENE AQS Q V YWLH G +
Sbjct: 212 AMSQKYLGTEFDFHGGGSDLIFPHHENEIAQSEGCSGQHPSVRYWLHNGFI 262
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I +YN +T+ K F K Y CG T Y+ PHIG+A V D+IRR ++H +
Sbjct: 4 ITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGY-K 62
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKIIN +N + T+A RY
Sbjct: 63 VTYVQNFTDVDDKIINTSNGEGVSWDTIANRY 94
>gi|328876354|gb|EGG24717.1| cysteinyl-tRNA synthetase [Dictyostelium fasciculatum]
Length = 628
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 120/194 (61%), Gaps = 18/194 (9%)
Query: 303 ELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-- 360
E +FE M+ VLPP TRV+E+I I +F++ +++ AY S+ SVYFD ++
Sbjct: 123 EASFFEDMKALNVLPPDALTRVTEYITEIVTFVEKIIENGFAY-ESNGSVYFDTVAYSKQ 181
Query: 361 HYF-----------KLWGRNENITQHAV--KRSPFDFALWKSAKPGEPWYESAWGKGRPG 407
H + KL E AV KR+ DFALWK +K EP + S WG+GRPG
Sbjct: 182 HDYGKLDPNAVGNEKLNSEGEGALSAAVSEKRNNNDFALWKKSKELEPKWNSPWGEGRPG 241
Query: 408 WHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGT 467
WHIECSAMAS G +D+H+GG DLKFPHH+NE AQS A + QW+NY++H+GHL
Sbjct: 242 WHIECSAMASDILGPNIDIHSGGEDLKFPHHDNEIAQSEAHYKCKQWINYFIHSGHLL-I 300
Query: 468 DGTRRLRAAR-FIT 480
DG++ ++ + FIT
Sbjct: 301 DGSKMSKSLKNFIT 314
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 6 QSSLALSYATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQN-KNHLKWYACGPTVYD 64
Q+S L A E P+W P G +G+ I N +T +K F+ + + WY CGPTVYD
Sbjct: 4 QTSPTLKSANKREQPQWHQPQGKPSGLFINNSLTMSKNEFVPSSGTKDVSWYICGPTVYD 63
Query: 65 SPHIGHAVCNVKLDIIRRILEHYF 88
+ H+GHA + D+IRRI+ Y
Sbjct: 64 ASHMGHARSYISFDVIRRIMRDYM 87
>gi|148909295|gb|ABR17747.1| unknown [Picea sitchensis]
Length = 602
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 103/169 (60%), Gaps = 8/169 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E+ M + LPP+ RV++ I I IQ +L AY+ + VYF VD +P
Sbjct: 194 RFCKEFQVDMAELNCLPPSVEPRVTDHINQIIEMIQQILRNGYAYVVENGDVYFSVDKYP 253
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L GR E I + K++P DFALWKSAKP EP+++S WG GRPGWHIECS
Sbjct: 254 KYGCLSGRKLDDNRAGERIAVDSRKQNPADFALWKSAKPSEPFWDSPWGPGRPGWHIECS 313
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM++ G D+H GG+DL FPHHENE AQSCA N S V YW+H G
Sbjct: 314 AMSAAHLGYCFDIHGGGVDLIFPHHENEIAQSCASCNDSN-VPYWIHNG 361
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 29 DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
+T + I+N ++K K F + + Y CG T YD HIGHA V DI+ R L+
Sbjct: 102 ETDLYIFNTMSKKKELFKAREPGKVGMYVCGVTAYDYSHIGHARVYVTFDILYRYLQRLG 161
Query: 89 HIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + + TDIDDKII++AN L E+ +++ R+
Sbjct: 162 Y-EVKYVRNFTDIDDKIISRANDLGENPLSLSNRF 195
>gi|359476173|ref|XP_002285478.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
Length = 571
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 105/169 (62%), Gaps = 9/169 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY E+ M LPP+ VS+ +P I I+ ++D AY + VYF VD FP
Sbjct: 164 RYCQEFHVDMTYLHCLPPSVEPCVSDHMPQIIDMIKQIIDNDCAY-RVEGDVYFSVDKFP 222
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L GR E + + K++P DFALWK+AK GEP+++S WG GRPGWHIECS
Sbjct: 223 EYGRLSGRKVEDNRAGERVAVDSRKKNPADFALWKAAKKGEPFWDSPWGPGRPGWHIECS 282
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM++ + G D+H GG+DL FPHHENE AQSCA QS ++YW+H G
Sbjct: 283 AMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACKQSN-ISYWIHNG 330
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
+YN +++ K F + + Y CG T YD HIGHA V D++ R L H
Sbjct: 77 LYNTMSRQKEVFKPKVDGRVGMYVCGVTAYDLSHIGHARVYVSFDVLYRYLRH-LEYEVN 135
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKII +AN + ED +++RY
Sbjct: 136 YVRNFTDVDDKIIARANEMGEDPINLSRRY 165
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V D++ R L H + + TD+DDKII +AN + ED +++RY
Sbjct: 112 GHARVYVSFDVLYRYLRH-LEYEVNYVRNFTDVDDKIIARANEMGEDPINLSRRY 165
>gi|452982358|gb|EME82117.1| hypothetical protein MYCFIDRAFT_203918 [Pseudocercospora fijiensis
CIRAD86]
Length = 808
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 114/186 (61%), Gaps = 23/186 (12%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+YE +F+ M+ V P + TRV+E+ P I F++ + AY ++ SVY+D ++
Sbjct: 249 KYEQRFFDDMKALNVRYPDKLTRVTEYGPQIVDFVKQIQGNGYAY-ENEGSVYYDTTAWE 307
Query: 361 ----HYFKL--WGRNENITQH-----------AVKRSPFDFALWKSAKPGEPWYESAWGK 403
HY +L W RN++ Q + K+S DFALWK++K GEP ++S WG+
Sbjct: 308 SSGGHYARLEPWNRNDSELQADGEGSLAAKKTSFKKSGADFALWKASKAGEPSWDSPWGE 367
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF-----HNQSQWVNYW 458
GRPGWHIECSAMAS G Q D+H+GGIDL FPHH+NE AQS A+ QWVNY+
Sbjct: 368 GRPGWHIECSAMASDVLGKQFDIHSGGIDLAFPHHDNELAQSEAYWHKCGAESEQWVNYF 427
Query: 459 LHTGHL 464
LH GHL
Sbjct: 428 LHMGHL 433
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 58/100 (58%), Gaps = 9/100 (9%)
Query: 16 SCESPKWSLPSGYDTGIK-------IYNPITKTKVPFIIQNKNHLK--WYACGPTVYDSP 66
+ P+W P ++ +YN +T+TK PFI +K+ K WYACGPTVYD
Sbjct: 2 AAAQPEWRAPPAPSAEVQARLPKLSVYNSLTRTKTPFIPLDKSGKKVGWYACGPTVYDDS 61
Query: 67 HIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII 106
H+GHA V DIIRRI+ Y H + ++TD+DDKII
Sbjct: 62 HLGHARNYVSQDIIRRIMSDYLGFHINFVMNITDVDDKII 101
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKII 181
GHA V DIIRRI+ Y H + ++TD+DDKII
Sbjct: 64 GHARNYVSQDIIRRIMSDYLGFHINFVMNITDVDDKII 101
>gi|387772152|ref|ZP_10128111.1| cysteine--tRNA ligase [Haemophilus parahaemolyticus HK385]
gi|386907797|gb|EIJ72499.1| cysteine--tRNA ligase [Haemophilus parahaemolyticus HK385]
Length = 459
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/167 (47%), Positives = 99/167 (59%), Gaps = 8/167 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R + IP I + ++ L+ AY+ +D V FDV+SFP Y
Sbjct: 95 EMHKDFDALNILRPDVEPRATHHIPEIIAMVEKLIANGHAYVAADGDVMFDVESFPKYGA 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N + Q +VK++P DF LWK +K EP +ES WGKGRPGWHIECSAM S
Sbjct: 155 LSRQNLDQLQAGARVEIKSVKKNPMDFVLWKMSKENEPSWESPWGKGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG DL FPHHENE AQSC H +VNYWLHTG L
Sbjct: 215 KELGEHFDIHGGGSDLMFPHHENEIAQSCCAH-HGDYVNYWLHTGML 260
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHY-FHI 90
+KIYN + + K F N N + Y CG TVYD H GH V D+I R L + +++
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYNL 61
Query: 91 HSIVISSVTDIDDKIINKA 109
H + ++TD+DDKII +A
Sbjct: 62 H--YVRNITDVDDKIIKRA 78
>gi|296242820|ref|YP_003650307.1| cysteinyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
gi|296095404|gb|ADG91355.1| cysteinyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
Length = 481
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 7/167 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y EY E++ V RV++ I I FIQ L++ AY+ SVYFDV+++
Sbjct: 95 YTKEYLEALNSLNV-QIDHHPRVTQHISEIIEFIQRLIEKGHAYVTPSGSVYFDVNTYED 153
Query: 362 YFKLWGR--NENITQH----AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAM 415
Y +L GR E +Q + K++P+DFALWK+AKPGEP++ES WG+GRPGWHIECS M
Sbjct: 154 YGRLSGRLVKEAWSQEPDFLSEKKNPYDFALWKAAKPGEPFWESPWGRGRPGWHIECSVM 213
Query: 416 ASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
++ + G + D+H GG DL FPHHENE AQS + WV+ W+H G
Sbjct: 214 STRYLGERFDIHGGGTDLIFPHHENERAQSESALGSRPWVSIWMHVG 260
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +TKT LK Y CGPTVYDS H+GH V D+ +R L + H
Sbjct: 5 LKIYNTLTKTVEKIQPVEPGLLKMYVCGPTVYDSTHVGHGRAYVMYDVFKRYLNSRGY-H 63
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I + ++TDIDDKIIN+A D+ + + Y
Sbjct: 64 VIHVMNITDIDDKIINRARDENRDWMEIVETY 95
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GH V D+ +R L + H I + ++TDIDDKIIN+A D+ + + Y
Sbjct: 42 GHGRAYVMYDVFKRYLNSRGY-HVIHVMNITDIDDKIINRARDENRDWMEIVETY 95
>gi|326503818|dbj|BAK02695.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 563
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 111/187 (59%), Gaps = 9/187 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E+ + + LPPT RV+E I +I I ++ +AY+ D VYF VD+FP
Sbjct: 137 RFITEFLADVAELQCLPPTHEPRVTEHIENIIKLITEIIKNGKAYV-VDGDVYFSVDNFP 195
Query: 361 HYFKLWGR----NENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L GR N ++ AV KR+P DFALWK+AK GEP +ES WG GRPGWHIECS
Sbjct: 196 EYLSLSGRILDHNRAGSRVAVDTRKRNPADFALWKAAKEGEPSWESPWGNGRPGWHIECS 255
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
AM++H+ G D+H GG DL FPHHENE AQS A + +S+ V W+H G + D
Sbjct: 256 AMSAHYLGHVFDIHGGGKDLIFPHHENELAQSRAAYPESE-VKCWMHNGFINIDDQKMSK 314
Query: 474 RAARFIT 480
F T
Sbjct: 315 SVNNFFT 321
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++++N +TK K F+ + + + Y CG T YD H+GHA V D++ R L+ +
Sbjct: 48 LQLFNSMTKKKELFVPRVEGKVGMYVCGVTPYDFSHVGHARAYVAFDVLYRYLK-FLGYE 106
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVK 151
+ + TDIDDKII +AN E +++ R+ + + + + PT V
Sbjct: 107 VDYVRNFTDIDDKIIKRANQNGETVTSLSSRFITEFLADVAELQCLP--PTHEPRVTEHI 164
Query: 152 LDIIRRILE 160
+II+ I E
Sbjct: 165 ENIIKLITE 173
>gi|121996916|ref|YP_001001703.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
gi|187629827|sp|A1WT89.1|SYC_HALHL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|121588321|gb|ABM60901.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
Length = 459
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 99/169 (58%), Gaps = 10/169 (5%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E GV PP R +E + + + I+ L+ AY+G + VYF V SFP Y KL G
Sbjct: 98 EDCSALGVEPPDHEPRATERLESMIALIEELIAGGHAYVGDNGDVYFSVASFPEYGKLSG 157
Query: 368 R-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
R I K P DF LWK+AK GEP + S WG GRPGWHIECSAM+
Sbjct: 158 RRVEELRSGSRIEPDEAKHDPVDFVLWKAAKSGEPAWPSPWGDGRPGWHIECSAMSRDLL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-CAFHNQSQWVNYWLHTGHLRGTD 468
G D+H GG+DL+FPHHENE AQS CA + ++VNYW+H GH+R D
Sbjct: 218 GSHFDIHGGGVDLQFPHHENEIAQSECA--SGHRFVNYWMHNGHVRIDD 264
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KI+N +T K PF ++ Y CG TVYD H+GHA V D + R L +
Sbjct: 2 LKIHNSLTGAKEPFQPIEPGQVRIYVCGMTVYDFCHLGHARALVVFDAVVRYL-RWLGYE 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TDIDDKII +A E + R+ +
Sbjct: 61 VTYVRNITDIDDKIIRRAAENGEPMTALTDRFIRAM 96
>gi|411117203|ref|ZP_11389690.1| cysteinyl-tRNA synthetase [Oscillatoriales cyanobacterium JSC-12]
gi|410713306|gb|EKQ70807.1| cysteinyl-tRNA synthetase [Oscillatoriales cyanobacterium JSC-12]
Length = 495
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 111/194 (57%), Gaps = 15/194 (7%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
Y E M++ +LP + +E IP I FI+ L+D AY +D VY+ V+ FP Y KL
Sbjct: 97 YLEDMKRLNILPAVAYPKATEVIPQIIDFIKRLIDQGYAY-AADGDVYYAVEKFPPYGKL 155
Query: 366 WGRNENITQHAV-----------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
GR + + KR P DFALWK+AKPGEP +ES WG GRPGWHIECSA
Sbjct: 156 SGRKLDQMEAGASGRVDEEAETKKRHPLDFALWKAAKPGEPEWESPWGMGRPGWHIECSA 215
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG--HLRGTDGTRR 472
M G ++D+HTGG DL FPHHENE AQS A + +WLH G +RG ++
Sbjct: 216 MVKELLGDRIDIHTGGEDLVFPHHENEIAQSEAALAKP-LSTFWLHNGFVKIRGDKMSKS 274
Query: 473 LRAARFITNLSGST 486
L+ I +L +T
Sbjct: 275 LKNFTTIRSLLETT 288
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ IYN +T+ K PF ++ Y CG TVYD H+GHA + D++RR L+ +
Sbjct: 3 LMIYNTLTRKKEPFTTIEPGKVRMYVCGVTVYDYCHLGHARSYIVWDMVRRYLQ-WRGYD 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIP-TRGHAVCNV 150
+ + TDIDDKII ++ ++ + +Y + + ++ ++ + V
Sbjct: 62 VCYVQNFTDIDDKIIRRSQEENLPWQDITHKYIDAYLEDMKRLNILPAVAYPKATEVIPQ 121
Query: 151 KLDIIRRILEHYF 163
+D I+R+++ +
Sbjct: 122 IIDFIKRLIDQGY 134
>gi|410947744|ref|XP_003980602.1| PREDICTED: probable cysteine--tRNA ligase, mitochondrial [Felis
catus]
Length = 697
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 105/164 (64%), Gaps = 4/164 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE + + M VLPPT RV+E IPHI SFI+ ++ AY + +VYFD+ S
Sbjct: 139 YEENFKQDMAALKVLPPTVYLRVTENIPHIISFIEGIIANGHAYSTAQGNVYFDLRSRGD 198
Query: 361 HYFKLWGRNENITQHAV---KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
Y KL G + V KR P DFALWK+AKP E ++ S WG GRPGWHIECS ++S
Sbjct: 199 RYGKLVGAVPSPATEPVDSDKRHPSDFALWKAAKPREVFWASPWGNGRPGWHIECSTISS 258
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHT 461
FG ++D+H+GG+DL FPHHENE AQ AFH QW NY+LH+
Sbjct: 259 LVFGSRLDIHSGGMDLAFPHHENEIAQCEAFHQCRQWGNYFLHS 302
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 70/110 (63%)
Query: 14 ATSCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVC 73
A+ W P+G+DTG+K+YN +T+ K P I+ + + WY+CGPTVYD H+GHA
Sbjct: 30 ASGTRGQGWLQPAGHDTGVKVYNSLTRRKDPLIVGSADAASWYSCGPTVYDHAHLGHACS 89
Query: 74 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
V+ DIIRRIL F + I++ +TD+DDKII +A+ + ++A Y
Sbjct: 90 YVRFDIIRRILTRVFGCNIIMVMGITDVDDKIIKRASEMNVSPASLANLY 139
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + I++ +TD+DDKII +A+ + ++A Y
Sbjct: 85 GHACSYVRFDIIRRILTRVFGCNIIMVMGITDVDDKIIKRASEMNVSPASLANLY 139
>gi|401679837|ref|ZP_10811761.1| cysteine--tRNA ligase [Veillonella sp. ACP1]
gi|400218964|gb|EJO49835.1| cysteine--tRNA ligase [Veillonella sp. ACP1]
Length = 482
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 103/173 (59%), Gaps = 12/173 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY YFE M+ GV RVS IP I I TL+D AY D VYF V+ F
Sbjct: 93 RYIDSYFEVMDALGVERADVYPRVSTHIPDILKMISTLIDKGFAY-ELDGDVYFSVEKFD 151
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
HY +L GR I K++P DFALWK+AKPGEP++ES WG GRPGWHIECS
Sbjct: 152 HYGELSGRTLDDMEAGARIEVDGRKKNPMDFALWKAAKPGEPFWESPWGNGRPGWHIECS 211
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQS--CAFHNQSQWVNYWLHTGHL 464
AM+ + G + D H GG DL FPHHENE AQS C+ H+ S V YWLH G +
Sbjct: 212 AMSQKYLGEEFDFHGGGSDLIFPHHENEIAQSEGCSGHHPS--VKYWLHNGFI 262
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I +YN +T+ K F K Y CG T Y+ PHIG+A V D+IRR ++H +
Sbjct: 4 ITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGY-K 62
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKIIN +N + +A RY
Sbjct: 63 VTYVQNFTDVDDKIINTSNGEGVAWDVIANRY 94
>gi|336121638|ref|YP_004576413.1| cysteinyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
gi|334856159|gb|AEH06635.1| cysteinyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
Length = 476
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 98/164 (59%), Gaps = 8/164 (4%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ E MEK + P RVSE I I FI+ L+ AY+ D +YFDV F Y KL
Sbjct: 95 FLEDMEKLNIKPAYVYPRVSEHIKDIIRFIEVLIKKGYAYVADD-GIYFDVRKFKDYGKL 153
Query: 366 WGRNEN-------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
N + I + KR+P DFALWK AKP EP ++S WG+GRP WHIECSAM
Sbjct: 154 SNINLDEIRTGYRIETNLTKRNPEDFALWKFAKPNEPKWDSPWGEGRPAWHIECSAMGIK 213
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
+ G Q D+H GG DL FPHHENE AQS + ++ WV YW+HTG
Sbjct: 214 YLGEQFDIHGGGNDLIFPHHENEIAQSEVYTDKKPWVKYWIHTG 257
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +TK K F +++ +K Y CGPTVYD H+GH V D IRR LEH +I
Sbjct: 1 MKIYNTLTKKKEEFNSIDEHEVKMYVCGPTVYDYAHLGHGRTYVVFDTIRRYLEHKNYIV 60
Query: 92 SIVISSVTDIDDKIINKANS 111
+VI + TDIDDKII +AN
Sbjct: 61 KLVI-NFTDIDDKIIKRANE 79
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS 186
GH V D IRR LEH +I +VI + TDIDDKII +AN
Sbjct: 38 GHGRTYVVFDTIRRYLEHKNYIVKLVI-NFTDIDDKIIKRANE 79
>gi|118595239|ref|ZP_01552586.1| cysteinyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
gi|118441017|gb|EAV47644.1| cysteinyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
Length = 456
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 101/162 (62%), Gaps = 8/162 (4%)
Query: 311 EKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRN- 369
E GV+ P + +E I + IQ L++ AY+GS++ V++ V F Y KL G++
Sbjct: 101 EALGVISPDAEPKATESIDAMIIMIQGLIEKGYAYVGSNNDVFYAVSKFNGYGKLSGKSL 160
Query: 370 ------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQ 423
+ K++ FDF LWKSAKPGEP + S WGKGRPGWHIECSAM++ F G
Sbjct: 161 EDLRAGNRVEVDKFKKNSFDFVLWKSAKPGEPCWNSPWGKGRPGWHIECSAMSNKFLGKN 220
Query: 424 VDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
D+H GG DL+FPHHENE AQS AF N Q NYWLH G ++
Sbjct: 221 FDIHGGGQDLQFPHHENEIAQSEAF-NGCQMANYWLHNGFVK 261
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
IK++N ++K K F +K Y CG TVYD H+GHA + D+I R + +
Sbjct: 2 IKLFNSLSKKKEIFKSIVPGQVKMYVCGMTVYDFCHLGHARVLIVFDLIYRWFKASGY-E 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ ++TDIDDKII +A Y + K++
Sbjct: 61 VTYVRNITDIDDKIITRAAEQGVTYGVLTKQF 92
>gi|428672663|gb|EKX73576.1| cysteinyl-tRNA synthetase, putative [Babesia equi]
Length = 677
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 115/181 (63%), Gaps = 19/181 (10%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E E++E M V P TRVS+++ I FI+ ++ AY SD SVYFD+++F +
Sbjct: 160 WEKEFWEDMIALDVRLPDCITRVSDYMEDIVKFIEKIIANGYAY-ESDGSVYFDIEAFRN 218
Query: 362 -----YFKLWGRNENITQH------------AVKRSPFDFALWKSAKPGEPWYESAWGKG 404
Y KL + N A K+S DFALWK +KPGEP++ES WG G
Sbjct: 219 SGKHVYAKLEPTSFNDLNRLLDGEGTLGEVSANKKSKSDFALWKKSKPGEPYWESPWGLG 278
Query: 405 RPGWHIECSAMASHFFGGQV-DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGH 463
RPGWHIECSAM+S FG V DLH+GGIDL+FPHH+NE AQS A+ + ++WVNY++H GH
Sbjct: 279 RPGWHIECSAMSSSIFGDSVFDLHSGGIDLRFPHHDNEIAQSEAYLDTNKWVNYFIHFGH 338
Query: 464 L 464
L
Sbjct: 339 L 339
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 22 WSLPSGYD---TGIKIYNPIT-KTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
W PS + TG+++ N + + KV F+ + +KWY+CGPTVYD H+GHA +
Sbjct: 55 WQAPSKENKQITGLRVRNSLCPQEKVEFVPEEGRQIKWYSCGPTVYDVAHLGHARTYIAC 114
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVA 120
DIIR ILE+Y + + ++TD+DDKII +A + + VA
Sbjct: 115 DIIRSILENYLNYDVFFVVNITDVDDKIIQRAANEGKSVSEVA 157
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVA 195
GHA + DIIR ILE+Y + + ++TD+DDKII +A + + VA
Sbjct: 106 GHARTYIACDIIRSILENYLNYDVFFVVNITDVDDKIIQRAANEGKSVSEVA 157
>gi|375335611|ref|ZP_09776955.1| cysteinyl-tRNA synthetase [Succinivibrionaceae bacterium WG-1]
Length = 366
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 102/164 (62%), Gaps = 10/164 (6%)
Query: 307 FESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLW 366
++ + G+ P + + I I + +QTL+D AY+ S+ V F +DSF Y +L
Sbjct: 2 YKDFDALGIARPDIEPKATAHIDDIINLVQTLIDNGNAYVASNGDVMFSIDSFKDYGRLS 61
Query: 367 GRNEN-------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHF 419
G+ + KR+P+DF LWK +KPGEP +ES WG+GRPGWHIECSAM SH+
Sbjct: 62 GQKLEDLKAGIRVNVEEAKRNPYDFVLWKMSKPGEPMWESPWGQGRPGWHIECSAMNSHY 121
Query: 420 FGGQVDLHTGGIDLKFPHHENEEAQS-CAFHNQSQWVNYWLHTG 462
G D+H GG DL FPHHENE AQS CA+H + +V YW+H+G
Sbjct: 122 LGKVFDIHGGGSDLMFPHHENEIAQSCCAWH--TDYVKYWMHSG 163
>gi|390950398|ref|YP_006414157.1| cysteinyl-tRNA synthetase [Thiocystis violascens DSM 198]
gi|390426967|gb|AFL74032.1| cysteinyl-tRNA synthetase [Thiocystis violascens DSM 198]
Length = 462
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 101/165 (61%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E E G+LPPT R + + I IQTL+D AY+ + VY+ V FP Y KL G
Sbjct: 98 EDSETLGILPPTDEPRATAHMDDILDMIQTLIDKGFAYVADNGDVYYAVSRFPDYGKLSG 157
Query: 368 RN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+N +++ A KR P DFALWK+AKP EP ++S WG GRPGWHIECSAM++
Sbjct: 158 KNPQDLRSGARVEIGEAKRDPLDFALWKAAKPDEPAWDSPWGAGRPGWHIECSAMSTCAL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS + +VN W+H G +R
Sbjct: 218 GNHFDIHGGGADLQFPHHENEIAQSEGATGEP-FVNVWMHNGFVR 261
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++I+N +T+ K F ++ Y CG TVYD H+GHA V D++ R L+ +
Sbjct: 2 LQIHNTLTRQKETFQPIEPGKVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLKALGY-D 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQ--KVVGSIP----TRGH 145
I ++TDIDDKII +A E + + +R+ + +H+ + +G +P R
Sbjct: 61 VTYIRNITDIDDKIIRRAAENGEPFPALTERF-----IQAMHEDSETLGILPPTDEPRAT 115
Query: 146 AVCNVKLDIIRRILEHYF 163
A + LD+I+ +++ F
Sbjct: 116 AHMDDILDMIQTLIDKGF 133
>gi|224031283|gb|ACN34717.1| unknown [Zea mays]
gi|413949577|gb|AFW82226.1| hypothetical protein ZEAMMB73_235131 [Zea mays]
gi|413949578|gb|AFW82227.1| hypothetical protein ZEAMMB73_235131 [Zea mays]
Length = 561
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 105/171 (61%), Gaps = 9/171 (5%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E+ M + LPPT RV+E I HI I +++ +AY + VYF V+SFP Y
Sbjct: 127 EFLLDMTELQCLPPTCEPRVTEHIEHIIKLITQIMENGKAY-AIEGDVYFSVESFPEYLS 185
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L GR + Q KR+P DFALWK+AK GEP+++S WG+GRPGWHIECSAM++
Sbjct: 186 LSGRKFDQNQAGARVAFDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSA 245
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTD 468
H+ G D+H GG DL FPHHENE AQS A + S+ V W+H G + D
Sbjct: 246 HYLGHVFDIHGGGKDLIFPHHENELAQSRAAYPDSE-VKCWMHNGFVNKDD 295
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Query: 6 QSSLALSYATSCESPKWSL--PSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVY 63
Q+ L+ + A +SP + + + ++N TK + PF + + + Y CG T Y
Sbjct: 6 QAPLSATMAKEAQSPPSATIAEATAPPQLLLFNSFTKREEPFQPRVEGKVGMYVCGVTPY 65
Query: 64 DSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
D HIGHA V D++ R L+ + + + TDIDDKII +AN E +++ ++
Sbjct: 66 DFSHIGHARAYVAFDVLYRYLK-FLGYEVEYVRNFTDIDDKIIKRANERGETVTSLSSQF 124
>gi|350552639|ref|ZP_08921836.1| cysteinyl-tRNA synthetase [Thiorhodospira sibirica ATCC 700588]
gi|349793570|gb|EGZ47402.1| cysteinyl-tRNA synthetase [Thiorhodospira sibirica ATCC 700588]
Length = 466
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 102/165 (61%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + +LPPT R ++ I I I+ LL AY S+ +Y+ V+SF Y KL G
Sbjct: 98 EDAQALNILPPTHEPRATQHIQPILHMIEQLLAKGHAYQASNQDIYYAVNSFKDYGKLSG 157
Query: 368 RN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
R E++ A KR P DF LWK AKPGEP ++S WG GRPGWHIECSAM+ +
Sbjct: 158 RQLEDLRAGARVEPDEAKRDPLDFVLWKRAKPGEPSWDSPWGLGRPGWHIECSAMSGSYL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS A H+ + +VNYW+H G +R
Sbjct: 218 GQHFDIHGGGQDLQFPHHENEIAQSEASHDCT-YVNYWMHNGFVR 261
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILE-HYFHI 90
+ IYN +T+ K PFI H++ Y CG TVYD H+GHA V D++ R L+ F++
Sbjct: 2 LHIYNSLTRKKDPFIPLTPGHVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLQAQGFNV 61
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TDIDDKII +A E + + +R+ +
Sbjct: 62 --TYVRNITDIDDKIIQRAAQNHEPIEQLTERFIAAM 96
>gi|339483845|ref|YP_004695631.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. Is79A3]
gi|338805990|gb|AEJ02232.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. Is79A3]
Length = 460
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 103/165 (62%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E GV PT R ++++ ++ I TL++ AY S+ VY+ V +FP Y +L G
Sbjct: 98 EDSSALGVSSPTYEPRATDYVENMIGMIGTLIEKDLAYRASNGDVYYAVHNFPSYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + + K+ P DF LWKSAKPGEP++ES WG+GRPGWHIECSAM+
Sbjct: 158 KSLNDLRAGERVEIDSNKKDPLDFVLWKSAKPGEPFWESPWGRGRPGWHIECSAMSEQLL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS H+ +VNYW+H G +R
Sbjct: 218 GVHFDIHGGGQDLQFPHHENEIAQSEGAHDHP-FVNYWMHNGFVR 261
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHI 90
+KIYN I + K F+ +K Y CG TVYD H+GHA V D +IR + F +
Sbjct: 2 LKIYNSIAREKQDFVPIIPGKVKIYVCGMTVYDYCHLGHARVLVVFDTVIRWFKANDFDV 61
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TDIDDKII +A E T+ +R+ +
Sbjct: 62 S--YVRNITDIDDKIIKRAQENNESIGTLTQRFIQAM 96
>gi|157374677|ref|YP_001473277.1| cysteinyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
gi|187631638|sp|A8FTH6.1|SYC_SHESH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|157317051|gb|ABV36149.1| Cysteine--tRNA ligase [Shewanella sediminis HAW-EB3]
Length = 459
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 94/152 (61%), Gaps = 8/152 (5%)
Query: 318 PTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENITQHAV 377
P R + IP I ++ L++ + AY+ + V F V SFP Y +L G+N + Q
Sbjct: 108 PDFEPRATLHIPEIIDMVEKLIEKEHAYVSGNGDVLFSVSSFPEYGRLSGQNLDQLQAGA 167
Query: 378 -------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGG 430
KR P DF LWK +KPGEP +ES WG GRPGWHIECSAM S G D+H GG
Sbjct: 168 RVEVEDTKRDPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGG 227
Query: 431 IDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
DL+FPHHENE AQSC HN + +VNYW+HTG
Sbjct: 228 SDLQFPHHENEIAQSCCAHN-TPYVNYWMHTG 258
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T+ K F + Y CG T+YD HIGH V D+I R L Y
Sbjct: 2 LKLYNSLTRQKEEFKPLQPGKVGMYVCGITIYDLCHIGHGRTFVSFDMIVRYL-RYSGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TD+DDKII +AN KE +++ +R
Sbjct: 61 VNFLRNITDVDDKIIKRANENKESCESLTER 91
>gi|255659332|ref|ZP_05404741.1| cysteine--tRNA ligase [Mitsuokella multacida DSM 20544]
gi|260848414|gb|EEX68421.1| cysteine--tRNA ligase [Mitsuokella multacida DSM 20544]
Length = 477
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 103/172 (59%), Gaps = 8/172 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY YFE+M+ V RVSE +P I + +Q L+D AY+ + VY+ V+ F
Sbjct: 91 RYIKAYFEAMDALNVRHADVYPRVSETMPEIIAMVQKLIDKGYAYVIDNGDVYYSVEKFS 150
Query: 361 HYFKLWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
HY KL GR+ + Q + K P DFALWK+AKPGEP ++S WGKGRPGWHIECS
Sbjct: 151 HYGKLSGRSLDDMQAGARIEVNTAKHHPMDFALWKAAKPGEPSWDSPWGKGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCA-FHNQSQWVNYWLHTGHL 464
M+ + G + D H GG DL FPHHENE AQS A + + YWLH G +
Sbjct: 211 TMSLKYLGKKFDFHGGGSDLIFPHHENEIAQSQACIGDDHSFAQYWLHNGFI 262
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRIL-EHYFHI 90
+K+YN +T+ K F + Y CG T Y+ PHIG+A V D+IRR + + +
Sbjct: 2 LKVYNTMTRRKEEFKPLKPGEVSIYCCGVTPYNHPHIGNARPFVTWDVIRRYFAKKGYKV 61
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
H I + TD+DDKIIN AN +K ++ RY
Sbjct: 62 H--YIQNFTDVDDKIINAANKEGVTWKDISDRY 92
>gi|127513439|ref|YP_001094636.1| cysteinyl-tRNA synthetase [Shewanella loihica PV-4]
gi|187631636|sp|A3QFX9.1|SYC_SHELP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|126638734|gb|ABO24377.1| cysteinyl-tRNA synthetase [Shewanella loihica PV-4]
Length = 459
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 99/169 (58%), Gaps = 8/169 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R E + + + P R ++ +P I ++ LL+ AYI + V F V SFP
Sbjct: 91 RLTQEMYHDFDALNMKRPDFEPRATQHMPEIIEMVERLLERDHAYIADNGDVLFSVASFP 150
Query: 361 HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L G+N + Q KR P DF LWK +KPGEP ++S WG GRPGWHIECS
Sbjct: 151 EYGRLSGQNLDQLQAGARVEVDENKRDPMDFVLWKMSKPGEPTWDSPWGPGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM S G D+H GG DL+FPHHENE AQSC H+ + +VNYW+HTG
Sbjct: 211 AMNSKHLGEHFDIHGGGSDLQFPHHENEIAQSCCAHD-TPYVNYWMHTG 258
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T+ K F + Y CG T+YD HIGH V D+I R L Y
Sbjct: 2 LKLYNSLTRQKEEFKPIQPGKVGMYVCGVTIYDLCHIGHGRTFVAFDMIVRYL-RYIGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLI--FKILHQKVVGSIPTRGHAVCN 149
++TD+DDKII +A E + +R + F L+ K P +
Sbjct: 61 VNFHRNITDVDDKIIKRATENGESCDALTERLTQEMYHDFDALNMKRPDFEPRATQHMPE 120
Query: 150 VKLDIIRRILE 160
+ ++++ R+LE
Sbjct: 121 I-IEMVERLLE 130
>gi|251793189|ref|YP_003007917.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
gi|247534584|gb|ACS97830.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
Length = 459
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 103/171 (60%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R +E ++ + +L P R + IP I + ++ L+ AY+ + V FDV+SF
Sbjct: 91 RMVVEMYKDFDALNILRPDFEPRATHHIPEITAIVEKLIQRGHAYVADNGDVMFDVESFK 150
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ I + +K++P DF LWK +KP EP ++S WGKGRPGWHIECS
Sbjct: 151 EYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM S G D+H GG DL FPHHENE AQSC H +Q+VNYWLH+G +
Sbjct: 211 AMNSKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-NQYVNYWLHSGMI 260
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K++N +T+ K F + + Y CG TVYD HIGH V D+I R L Y
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TD+DDKII +A KE + R + +
Sbjct: 61 LTYVRNITDVDDKIIKRALENKETCDQLVDRMVVEM 96
>gi|114563765|ref|YP_751278.1| cysteinyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
gi|122299286|sp|Q07ZX5.1|SYC_SHEFN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|114335058|gb|ABI72440.1| cysteinyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
Length = 460
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R + I I +Q LLD AY+ S+ V F V SFP Y +
Sbjct: 95 EMHQDFDALNMKRPDFEPRATLHIEEIIDMVQRLLDRDHAYVASNGDVLFSVASFPEYGQ 154
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L G+N + Q KR+P DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSGQNLDQLQAGARVEIDNAKRNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ + +VNYW+HTG
Sbjct: 215 KHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHD-TPYVNYWMHTG 258
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN I++ K F N + Y CG T+YD HIGH V D+I R L Y
Sbjct: 2 LKIYNSISRDKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYL-RYIGYE 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL--IFKILHQKVVGSIPTRGHAVCN 149
++TD+DDKII +A E +++ +R + F L+ K P +
Sbjct: 61 VNFQRNITDVDDKIIKRAAENNESCESLTERLIAEMHQDFDALNMKRPDFEPRATLHIEE 120
Query: 150 VKLDIIRRILE 160
+ +D+++R+L+
Sbjct: 121 I-IDMVQRLLD 130
>gi|206890680|ref|YP_002249765.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
11347]
gi|226735066|sp|B5YID4.1|SYC_THEYD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|206742618|gb|ACI21675.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 487
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 107/172 (62%), Gaps = 11/172 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI---GSDHSVYFDVD 357
+Y EY++ M++ G+ + +E I + IQTL++ AY G SVYF V+
Sbjct: 90 KYTGEYYKDMDRLGITRADIEPKATEHINEMIEIIQTLINKGYAYEIEEGQAKSVYFSVE 149
Query: 358 SFPHYFKLWGR--NENITQHAV-----KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHI 410
FP Y KL + +E I+ V K+SP DFALWK++KPGEPW++S WGKGRPGWHI
Sbjct: 150 KFPQYGKLSKKKIDELISGARVEVDERKKSPLDFALWKASKPGEPWWDSPWGKGRPGWHI 209
Query: 411 ECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
ECSAM+ + G D+H GG DL FPHHENE AQS AF + + YW+H G
Sbjct: 210 ECSAMSIKYLGETFDIHGGGADLIFPHHENEIAQSEAFTGKP-FAKYWIHNG 260
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++++N +T F N + YACG TVYD HIGHA V D+I + L Y
Sbjct: 1 MRVFNTLTDKLEEFKPINDKKVGIYACGVTVYDLCHIGHARSAVVFDVIVKYL-RYKGYE 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TDIDDKIIN+AN +K +A++Y
Sbjct: 60 VKFVKNFTDIDDKIINRANKEGVSWKEIAEKY 91
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V D+I + L Y + + TDIDDKIIN+AN +K +A++Y
Sbjct: 38 GHARSAVVFDVIVKYL-RYKGYEVKFVKNFTDIDDKIINRANKEGVSWKEIAEKY 91
>gi|222053657|ref|YP_002536019.1| cysteinyl-tRNA synthetase [Geobacter daltonii FRC-32]
gi|254781681|sp|B9LZV4.1|SYC_GEOSF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|221562946|gb|ACM18918.1| cysteinyl-tRNA synthetase [Geobacter daltonii FRC-32]
Length = 494
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 104/174 (59%), Gaps = 11/174 (6%)
Query: 297 LFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY-IGSDHSVYFD 355
L + R+ E+ ME+ G+ PT + +E I I S +QTL+D AY G D V F
Sbjct: 88 LISERFIKEFDRDMERLGLKLPTCQPKATEHIDEIISLVQTLIDKDFAYQAGGD--VNFC 145
Query: 356 VDSFPHYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGW 408
V+ F Y KL GR Q KR P DFALWK AKPGEP++ES WGKGRPGW
Sbjct: 146 VEKFDSYLKLSGRTLEDMQAGARIEVDERKRHPMDFALWKEAKPGEPFWESPWGKGRPGW 205
Query: 409 HIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
HIECSAM+ + G D+H GG DL FPHHENE AQS A + +VNYWLH G
Sbjct: 206 HIECSAMSMKYLGTTFDIHGGGKDLIFPHHENEIAQSEAATGKP-FVNYWLHNG 258
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
G+++YN ++ K F+ +K Y CG TVYD HIGHA NV D+I R H +
Sbjct: 2 GLRVYNTLSGNKEEFVPVEPGKVKMYVCGVTVYDHCHIGHARANVVFDVIYRYFCH-LGL 60
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TDIDDKIIN+AN Y +++R+
Sbjct: 61 DVTYVRNYTDIDDKIINRANREGVTYDLISERF 93
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA NV D+I R H + + + TDIDDKIIN+AN Y +++R+
Sbjct: 40 GHARANVVFDVIYRYFCH-LGLDVTYVRNYTDIDDKIINRANREGVTYDLISERF 93
>gi|150402240|ref|YP_001329534.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C7]
gi|166200151|sp|A6VG07.1|SYC_METM7 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|150033270|gb|ABR65383.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C7]
Length = 476
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 111/182 (60%), Gaps = 9/182 (4%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ M V P +V+E IP I +FI+ L++ AY +++ VYF+V F +Y KL
Sbjct: 96 FLNDMATLKVKPADIYPKVTEHIPEIIAFIEKLIEKGFAY-KTENGVYFEVKKFENYGKL 154
Query: 366 WGRN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
N E++ A K++P DFALWK+AKPGEP +ES +G+GRPGWHIECSAM+S
Sbjct: 155 SNINLEDLISGARIEPSDEKKNPEDFALWKTAKPGEPKWESPFGEGRPGWHIECSAMSSK 214
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAARF 478
+ G Q D+H GG DL FPHHENE AQS A+ + WVNYWLHTG + F
Sbjct: 215 YLGEQFDIHGGGRDLSFPHHENEIAQSVAYSGK-DWVNYWLHTGFVMVNGEKMSKSLGNF 273
Query: 479 IT 480
IT
Sbjct: 274 IT 275
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T+ + F N+N +K Y CGPTVYD H+GH V DIIRR LEH +
Sbjct: 2 LKVYNTLTRKEEEFKPLNENEVKMYVCGPTVYDHTHLGHGRTYVSFDIIRRYLEHIGYTV 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
++VI + TDIDDKII ++ ++ K +++ +
Sbjct: 62 NLVI-NFTDIDDKIIKRSQEKGKNPKELSETF 92
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GH V DIIRR LEH + ++VI + TDIDDKII ++ ++ K +++ +
Sbjct: 39 GHGRTYVSFDIIRRYLEHIGYTVNLVI-NFTDIDDKIIKRSQEKGKNPKELSETF 92
>gi|357140592|ref|XP_003571849.1| PREDICTED: LOW QUALITY PROTEIN: cysteinyl-tRNA synthetase-like
[Brachypodium distachyon]
Length = 532
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 102/170 (60%), Gaps = 8/170 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E+ M + LPPT RV++ I I I + +AY+ VYF VD+FP
Sbjct: 95 RFIDEFLHDMVQLQCLPPTHEPRVTDHIKQIIDLITKIKGKDKAYVIEGEGVYFSVDNFP 154
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L GR + KR+P DFALWKSAK GEP++ES WG+GRPGWHIECS
Sbjct: 155 EYLSLSGRKLEHNLPGSRVAIDTRKRNPADFALWKSAKDGEPFWESPWGRGRPGWHIECS 214
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQW-VNYWLHTG 462
AM+ H+ G D+H GG DL FPHHENE AQS A +++S+ + W+H G
Sbjct: 215 AMSEHYLGQLFDIHGGGKDLIFPHHENELAQSRAANSKSEVKLECWMHNG 264
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 30/121 (24%)
Query: 25 PSGYDTGI---KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
PS D + +++ P+ + KV Y CG T YD H+GHA V D++
Sbjct: 6 PSTPDAAVPETEVFRPVVEGKVSM----------YVCGVTTYDFSHVGHARAYVAFDVLY 55
Query: 82 RILE------HYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQK 135
R L+ Y H + TDIDDKII +AN E ++ R+ I + LH
Sbjct: 56 RYLKCLGYEVQYVH-------NFTDIDDKIIRRANEAGETATNLSSRF----IDEFLHDM 104
Query: 136 V 136
V
Sbjct: 105 V 105
>gi|261868784|ref|YP_003256706.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|415770039|ref|ZP_11484654.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|416108703|ref|ZP_11591198.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|444346355|ref|ZP_21154322.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
gi|261414116|gb|ACX83487.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|348004228|gb|EGY44753.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|348657072|gb|EGY74669.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|443541696|gb|ELT52102.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
Length = 469
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 102/171 (59%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R +E ++ + +L P R + IP I +Q L+ AY+ + V FDV+SF
Sbjct: 101 RMVVEMYKDFDALNILRPDFEPRATHHIPEIIDIVQKLIQRGHAYVADNGDVMFDVESFK 160
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ I + +K++P DF LWK +KP EP ++S WGKGRPGWHIECS
Sbjct: 161 DYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECS 220
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM S G D+H GG DL FPHHENE AQSC H +Q+VNYWLH+G +
Sbjct: 221 AMNSKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-NQYVNYWLHSGMI 270
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K++N +T+ K F + + Y CG TVYD HIGH V D+I R L Y
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYL-RYLGYD 70
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TD+DDKII +A KE + R + +
Sbjct: 71 LTYVRNITDVDDKIIKRALENKETCDQLVDRMVVEM 106
>gi|422336724|ref|ZP_16417697.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus F0387]
gi|353346036|gb|EHB90323.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus F0387]
Length = 459
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 103/171 (60%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R +E ++ + +L P R + IP I + ++ L+ AY+ + V FDV+SF
Sbjct: 91 RMVVEMYKDFDALNILRPDFEPRATHHIPEITAIVEKLIQRGHAYVADNGDVMFDVESFK 150
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ I + +K++P DF LWK +KP EP ++S WGKGRPGWHIECS
Sbjct: 151 EYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM S G D+H GG DL FPHHENE AQSC H +Q+VNYWLH+G +
Sbjct: 211 AMNSKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-NQYVNYWLHSGMI 260
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K++N +T+ K F + + Y CG TVYD HIGH V D+I R L Y
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TD+DDKII +A KE + R + +
Sbjct: 61 LTYVRNITDVDDKIIKRALENKETCDQLVDRMVVEM 96
>gi|305663603|ref|YP_003859891.1| cysteinyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
gi|304378172|gb|ADM28011.1| cysteinyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
Length = 476
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 101/159 (63%), Gaps = 8/159 (5%)
Query: 323 RVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRN--ENITQH----A 376
RV+E I I FI+ L+D AY+ SVYFD+ Y KL GR E Q +
Sbjct: 113 RVTEHINEIIEFIKGLIDKGYAYVAPSGSVYFDISLVNDYGKLSGRKKAEEWRQEEEFLS 172
Query: 377 VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFP 436
KR+P+DFALWK++KPGEP++ES WG+GRPGWH EC+ M+S + G Q D+H GG DL FP
Sbjct: 173 EKRNPYDFALWKASKPGEPFWESPWGRGRPGWHTECAVMSSKYLGTQFDVHGGGQDLIFP 232
Query: 437 HHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTRRL 473
HHENE A + A + WV YW+H G+L RG ++ L
Sbjct: 233 HHENEIAMAEALYGVKPWVKYWIHVGYLTIRGEKMSKSL 271
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILE--HYFH 89
I IYN +++ PF N +K Y CGPTVYD H+GH + D I+R L+ Y
Sbjct: 3 ITIYNTLSRRIEPFEPINPPLVKAYFCGPTVYDYTHLGHIRAYLAFDFIKRYLKLRGYDI 62
Query: 90 IHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
IH I ++TDIDDKII +AN +K + +Y
Sbjct: 63 IH---IQNITDIDDKIIKRANEEGVSWKELTDKY 93
>gi|365966530|ref|YP_004948092.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|365745443|gb|AEW76348.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
ANH9381]
Length = 469
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 101/169 (59%), Gaps = 8/169 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R +E ++ + +L P R + IP I +Q L+ AY+ + V FDV+SF
Sbjct: 101 RMVVEMYKDFDALNILRPDFEPRATHHIPEIIDIVQKLIQRGHAYVADNGDVMFDVESFK 160
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ I + +K++P DF LWK +KP EP ++S WGKGRPGWHIECS
Sbjct: 161 DYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECS 220
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM S G D+H GG DL FPHHENE AQSC H +Q+VNYWLH+G
Sbjct: 221 AMNSKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-NQYVNYWLHSG 268
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K++N +T+ K F + + Y CG TVYD HIGH V D+I R L Y
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYL-RYLGYD 70
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TD+DDKII A KE + R + +
Sbjct: 71 LTYVRNITDVDDKIIKHALENKETCDQLVDRMVVEM 106
>gi|78044929|ref|YP_361143.1| cysteinyl-tRNA synthetase [Carboxydothermus hydrogenoformans
Z-2901]
gi|109894889|sp|Q3A9P1.1|SYC_CARHZ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|77997044|gb|ABB15943.1| cysteinyl-tRNA synthetase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 465
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/171 (47%), Positives = 108/171 (63%), Gaps = 9/171 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y +EYF+ ++ GV T +V+E IP I ++ L++ AY + +VYF VDSF
Sbjct: 90 KYIIEYFKDADRLGVKRATVHPKVTEHIPEIIEMVKGLIEKGYAY-EVEGNVYFAVDSFS 148
Query: 361 HYFKLWGRN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR+ E + A K++P DFALWK AKPGEP++ES WG GRPGWHIECS
Sbjct: 149 DYGKLSGRDLEELKAGARVEVDEKKKNPLDFALWKKAKPGEPYWESPWGPGRPGWHIECS 208
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM+ + G D+H GG DL FPHHENE AQS AF + + YW+H G +
Sbjct: 209 AMSLKYLGENFDIHGGGADLVFPHHENEVAQSEAFTGKP-FARYWMHNGFI 258
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +TKTK FI + + Y CGPT Y+ HIG+A V D +RR E Y
Sbjct: 1 MKIYNTLTKTKEEFIPREPGKVYMYVCGPTTYNYIHIGNARPIVFFDTVRRYFE-YKGFE 59
Query: 92 SIVISSVTDIDDKIINKA 109
I + + TDIDDKIIN+A
Sbjct: 60 VIYVQNFTDIDDKIINRA 77
>gi|108706133|gb|ABF93928.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
Length = 338
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/187 (44%), Positives = 112/187 (59%), Gaps = 9/187 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E+ M + LPPT RV++ I HI I +++ +AY + VYF VD+FP
Sbjct: 100 RFINEFLLDMAQLQCLPPTCEPRVTDHIEHIIELITKIMENGKAY-AMEGDVYFSVDTFP 158
Query: 361 HYFKLWGR--NENITQHAV-----KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L GR + N+ V KR+P DFALWK+AK GEP+++S WG+GRPGWHIECS
Sbjct: 159 EYLSLSGRKLDHNLAGSRVAVDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECS 218
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
AM++H+ G D+H GG DL FPHHENE AQS A + +S+ V W+H G + D
Sbjct: 219 AMSAHYLGHVFDIHGGGKDLIFPHHENELAQSRAAYPESE-VKCWMHNGFVNKDDQKMSK 277
Query: 474 RAARFIT 480
F T
Sbjct: 278 SDKNFFT 284
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++++N +TK K F + ++ Y CG T YD HIGHA V D++ R L+ +
Sbjct: 11 LELFNSMTKKKELFEPLVEGKVRMYVCGVTPYDFSHIGHARAYVAFDVLYRYLK-FLGYE 69
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TDIDDKII +AN E +++ R+
Sbjct: 70 VEYVRNFTDIDDKIIKRANEAGETVTSLSSRF 101
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPTR----GHAVCNVKLDIIRRILEHYFHIHSIVISSV 173
T K F PL+ + V G P GHA V D++ R L+ + + +
Sbjct: 18 TKKKELFEPLVEGKVRMYVCGVTPYDFSHIGHARAYVAFDVLYRYLK-FLGYEVEYVRNF 76
Query: 174 TDIDDKIINKANSLKEDYKTVAKRYFLRLIFKI 206
TDIDDKII +AN E +++ R+ + +
Sbjct: 77 TDIDDKIIKRANEAGETVTSLSSRFINEFLLDM 109
>gi|444349739|ref|ZP_21157091.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
gi|443543976|gb|ELT54067.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
Length = 435
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 101/169 (59%), Gaps = 8/169 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R +E ++ + +L P R + IP I +Q L+ AY+ + V FDV+SF
Sbjct: 67 RMVVEMYKDFDALNILRPDFEPRATHHIPEIIDIVQKLIQRGHAYVADNGDVMFDVESFK 126
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ I + +K++P DF LWK +KP EP ++S WGKGRPGWHIECS
Sbjct: 127 DYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECS 186
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM S G D+H GG DL FPHHENE AQSC H +Q+VNYWLH+G
Sbjct: 187 AMNSKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-NQYVNYWLHSG 234
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKED 115
Y CG TVYD HIGH V D+I R L Y + ++TD+DDKII A KE
Sbjct: 2 YVCGVTVYDLCHIGHGRTFVCFDVIARYL-RYLGYDLTYVRNITDVDDKIIKHALENKET 60
Query: 116 YKTVAKRYFLPL 127
+ R + +
Sbjct: 61 CDQLVDRMVVEM 72
>gi|115480611|ref|NP_001063899.1| Os09g0556500 [Oryza sativa Japonica Group]
gi|113632132|dbj|BAF25813.1| Os09g0556500 [Oryza sativa Japonica Group]
gi|125606594|gb|EAZ45630.1| hypothetical protein OsJ_30298 [Oryza sativa Japonica Group]
Length = 569
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 106/175 (60%), Gaps = 11/175 (6%)
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY-IGSDHSVYF 354
F + RY ++ M LPP+ RVS+ I I + I+ ++D AY IG D VYF
Sbjct: 157 FSLSKRYSDDFLSDMANLHCLPPSVEPRVSDHIDQIINMIKQIIDNDCAYAIGGD--VYF 214
Query: 355 DVDSFPHYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPG 407
V++FP Y L GR E + K++P DFALWK+AK GEP ++S WG GRPG
Sbjct: 215 SVENFPEYGDLSGRKLDDNRAGERVAVDERKKNPADFALWKAAKDGEPSWDSPWGPGRPG 274
Query: 408 WHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
WHIECSAM++H+ G D+H GG DL FPHHENE AQS A S +NYW+H G
Sbjct: 275 WHIECSAMSAHYLGHSFDIHGGGEDLIFPHHENEIAQSRAACCDSS-INYWIHNG 328
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 25 PSGYDTGIKIYNPITKTKVPFIIQNK---NHLKWYACGPTVYDSPHIGHAVCNVKLDIIR 81
P+G + +YN TK++ + Q + + Y CG T YD HIGHA V D++
Sbjct: 65 PAGRARELHLYN--TKSRRKELFQPRVPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLY 122
Query: 82 RILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
R L + H + + TDIDDKII +AN L ED +++KRY
Sbjct: 123 RYLRYLDH-KVRYVRNFTDIDDKIIARANQLGEDPFSLSKRY 163
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V D++ R L + H + + TDIDDKII +AN L ED +++KRY
Sbjct: 110 GHARAYVAFDVLYRYLRYLDH-KVRYVRNFTDIDDKIIARANQLGEDPFSLSKRY 163
>gi|209363819|ref|YP_001423944.2| cysteinyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
gi|212212147|ref|YP_002303083.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
gi|212219210|ref|YP_002305997.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
gi|215919193|ref|NP_820470.2| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 493]
gi|218511865|sp|Q83BL7.2|SYC_COXBU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|206584077|gb|AAO90984.2| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 493]
gi|207081752|gb|ABS78112.2| cysteinyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
gi|212010557|gb|ACJ17938.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
gi|212013472|gb|ACJ20852.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
Length = 460
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 99/164 (60%), Gaps = 8/164 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + VL P + R ++++P I IQ LLD + AY G + V+FDV F Y KL
Sbjct: 99 EDEKALRVLSPDQEPRATQYVPEIIKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSH 158
Query: 368 RNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
R+ + Q KR P DF LWK AKPGEP ++S WG+GRPGWHIECSAM+S
Sbjct: 159 RHLDELQAGARVEVSDSKRDPLDFVLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSIL 218
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG+DLKFPHHENE AQS A + +V W+H G L
Sbjct: 219 GQPFDIHGGGLDLKFPHHENEIAQSEA-GEEKPFVKLWMHAGLL 261
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KI+N +TK K F +K Y CG TVYD HIGH + D++ R L +
Sbjct: 3 VKIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGY-E 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQ 134
+ ++TDIDDKII +A KE +A+R+ +ILH+
Sbjct: 62 VTFVRNITDIDDKIIKRAGENKESPAALAERF-----IQILHE 99
>gi|226940330|ref|YP_002795404.1| Syc [Laribacter hongkongensis HLHK9]
gi|254781683|sp|C1D7F5.1|SYC_LARHH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226715257|gb|ACO74395.1| Syc [Laribacter hongkongensis HLHK9]
Length = 457
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 100/165 (60%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E GV P R ++F+P + S I+ L+ +AY + VY+ V F Y +L G
Sbjct: 98 EDAAALGVQKPNFEPRATQFVPDMISMIEELIGKGRAYAAPNGDVYYAVREFAGYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AKPGEP + S WG+GRPGWHIECSAM H+F
Sbjct: 158 KSLDDLRAGERVDVDPNKRDPMDFVLWKAAKPGEPAWPSPWGQGRPGWHIECSAMNEHYF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS H+ ++VNYW+H G +R
Sbjct: 218 GPHFDIHGGGADLQFPHHENEIAQSEGAHD-CKFVNYWMHNGFIR 261
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ +YN +++ K F + Y CG TVYD H+GHA V D++ R L +
Sbjct: 2 LHLYNTLSRQKERFQPIQPGKVNMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGYDL 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ V ++TDIDDKII +A E + +R+
Sbjct: 62 TYV-RNITDIDDKIIRRAAENGEPINVLTQRF 92
>gi|242036957|ref|XP_002465873.1| hypothetical protein SORBIDRAFT_01g047380 [Sorghum bicolor]
gi|241919727|gb|EER92871.1| hypothetical protein SORBIDRAFT_01g047380 [Sorghum bicolor]
Length = 466
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 101/178 (56%), Gaps = 9/178 (5%)
Query: 310 MEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGR- 368
M LPPTR RV+E I HI I ++ Y + VYF VDSFP Y L GR
Sbjct: 1 MAALQCLPPTREPRVTEHIEHIIELITKIIQNGHGY-AIEGDVYFSVDSFPEYLLLSGRK 59
Query: 369 ------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGG 422
E + KR+P DFALWKSAK GEP +ES WG GRPGWHIECSAM++H+ G
Sbjct: 60 LDQNRAGERVAVDTRKRNPADFALWKSAKEGEPSWESPWGHGRPGWHIECSAMSAHYLGH 119
Query: 423 QVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAARFIT 480
D+H GG DL FPHHENE AQS A + +S+ + W+H G + D F T
Sbjct: 120 VFDIHGGGRDLIFPHHENELAQSRAAYPESEVI-CWMHNGFVNKDDQKMSKSENNFFT 176
>gi|161830739|ref|YP_001597327.1| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 331]
gi|187629808|sp|A9N924.1|SYC_COXBR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|161762606|gb|ABX78248.1| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 331]
Length = 458
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 99/164 (60%), Gaps = 8/164 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + VL P + R ++++P I IQ LLD + AY G + V+FDV F Y KL
Sbjct: 97 EDEKALRVLSPDQEPRATQYVPEIIKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSH 156
Query: 368 RNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
R+ + Q KR P DF LWK AKPGEP ++S WG+GRPGWHIECSAM+S
Sbjct: 157 RHLDKLQAGARVEVSDSKRDPLDFVLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSIL 216
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG+DLKFPHHENE AQS A + +V W+H G L
Sbjct: 217 GQPFDIHGGGLDLKFPHHENEIAQSEA-GEEKPFVKLWMHAGLL 259
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KI+N +TK K F +K Y CG TVYD HIGH + D++ R L +
Sbjct: 1 MKIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGY-E 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQ 134
+ ++TDIDDKII +A KE +A+R+ +ILH+
Sbjct: 60 VTFVRNITDIDDKIIKRAGENKESPAALAERF-----IQILHE 97
>gi|85000123|ref|XP_954780.1| cysteinyl-tRNA synthetase [Theileria annulata strain Ankara]
gi|65302926|emb|CAI75304.1| cysteinyl-tRNA synthetase, putative [Theileria annulata]
Length = 694
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 115/181 (63%), Gaps = 19/181 (10%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E E++ M GV P TRVS+++ I FI+ +LD AY+ SD SVYFD++SF +
Sbjct: 160 WEKEFWNDMLSLGVSLPDCITRVSDYMTEIVDFIKKILDNGYAYV-SDGSVYFDIESFRN 218
Query: 362 -----YFKLWGRNENITQHAV------------KRSPFDFALWKSAKPGEPWYESAWGKG 404
Y KL + N + K+S DFALWK +K EP +ES WG+G
Sbjct: 219 SGKHVYAKLEPTSFNDLNRILDAEGTLGEVSLNKKSKSDFALWKKSKVNEPSWESPWGRG 278
Query: 405 RPGWHIECSAMASHFFGGQV-DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGH 463
RPGWHIECSAM++ FG +V D+H+GGIDL+FPHH+NE AQS A+ + ++W NY+LH GH
Sbjct: 279 RPGWHIECSAMSTCIFGKEVFDIHSGGIDLRFPHHDNEIAQSEAYFDTNRWANYFLHFGH 338
Query: 464 L 464
L
Sbjct: 339 L 339
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 4/100 (4%)
Query: 14 ATSCESPKWSLPSGYD---TGIKIYNPIT-KTKVPFIIQNKNHLKWYACGPTVYDSPHIG 69
A+ + KW +PS D TG+ + N + +KV F+ + ++WY CGPTVYD+ H+G
Sbjct: 47 ASESDLRKWEIPSKKDKFLTGLYVKNSLNPSSKVEFVPEEGRKVRWYTCGPTVYDAAHMG 106
Query: 70 HAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
HA + D IR ILE+Y + + ++TD++DKII +A
Sbjct: 107 HARTYIACDTIRSILENYLNYDLFFVENITDVEDKIIQRA 146
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 184
GHA + D IR ILE+Y + + ++TD++DKII +A
Sbjct: 106 GHARTYIACDTIRSILENYLNYDLFFVENITDVEDKIIQRA 146
>gi|125564667|gb|EAZ10047.1| hypothetical protein OsI_32351 [Oryza sativa Indica Group]
Length = 569
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 106/175 (60%), Gaps = 11/175 (6%)
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY-IGSDHSVYF 354
F + RY ++ M LPP+ RVS+ I I + I+ ++D AY IG D VYF
Sbjct: 157 FSLSKRYSDDFLSDMANLHCLPPSVEPRVSDHIDQIINMIKQIIDNDCAYAIGGD--VYF 214
Query: 355 DVDSFPHYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPG 407
V++FP Y L GR E + K++P DFALWK+AK GEP ++S WG GRPG
Sbjct: 215 SVENFPEYGDLSGRKLDDNRAGERVAVDERKKNPADFALWKAAKDGEPSWDSPWGPGRPG 274
Query: 408 WHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
WHIECSAM++H+ G D+H GG DL FPHHENE AQS A S +NYW+H G
Sbjct: 275 WHIECSAMSAHYLGHSFDIHGGGEDLIFPHHENEIAQSRAACCDSS-INYWIHNG 328
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 27 GYDTGIKIYNPITKTKVPFIIQNK---NHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRI 83
G + +YN TK++ + Q + + Y CG T YD HIGHA V D++ R
Sbjct: 67 GRARELHLYN--TKSRRKELFQPRVPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLYRY 124
Query: 84 LEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
L + H + + TDIDDKII +AN L ED +++KRY
Sbjct: 125 LRYLDH-KVRYVRNFTDIDDKIIARANQLGEDPFSLSKRY 163
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V D++ R L + H + + TDIDDKII +AN L ED +++KRY
Sbjct: 110 GHARAYVAFDVLYRYLRYLDH-KVRYVRNFTDIDDKIIARANQLGEDPFSLSKRY 163
>gi|452824775|gb|EME31776.1| cysteinyl-tRNA synthetase [Galdieria sulphuraria]
Length = 809
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 114/182 (62%), Gaps = 19/182 (10%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RYE E++E ++K + PT +RV+++IP I +FI+ L++ AY ++ SVYFDV +F
Sbjct: 96 RYEQEFWEDLDKLNCIFPTYVSRVTDYIPEIITFIERLVERGYAY-EAEGSVYFDVQTFT 154
Query: 361 HY-FK---------------LWGRNENITQHA--VKRSPFDFALWKSAKPGEPWYESAWG 402
FK + G +Q A K+S DFALWK ++ EP ++S WG
Sbjct: 155 QAGFKYGQLEPTSVGDTERLMEGEGSWASQQARLEKKSAGDFALWKKSQVDEPGWQSPWG 214
Query: 403 KGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
GRPGWH+ECSAMAS FG +D+H GG DL+FPHHENE AQS A+ + WV ++LH+G
Sbjct: 215 YGRPGWHVECSAMASCIFGSHLDMHCGGEDLRFPHHENEIAQSEAYFEKDGWVKFFLHSG 274
Query: 463 HL 464
HL
Sbjct: 275 HL 276
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Query: 30 TGIKIYNPITKTKVPFI--IQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHY 87
+ + I N +TK K PF ++ + Y CGPTVYDS H+GHA + D IRRILE Y
Sbjct: 2 SSLVIRNSLTKNKEPFRPWKEDSKLVTCYICGPTVYDSAHVGHARNYLSFDTIRRILEGY 61
Query: 88 FHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
F + +VTD+DDKII K+ LKED++ ++ RY
Sbjct: 62 FGYEVELQMNVTDVDDKIIKKSKELKEDFRVISGRY 97
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA + D IRRILE YF + +VTD+DDKII K+ LKED++ ++ RY
Sbjct: 43 GHARNYLSFDTIRRILEGYFGYEVELQMNVTDVDDKIIKKSKELKEDFRVISGRY 97
>gi|153209422|ref|ZP_01947398.1| cysteinyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
gi|165919402|ref|ZP_02219468.1| cysteinyl-tRNA synthetase [Coxiella burnetii Q321]
gi|187629807|sp|A9KBJ2.1|SYC_COXBN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120575359|gb|EAX31983.1| cysteinyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
gi|165916918|gb|EDR35522.1| cysteinyl-tRNA synthetase [Coxiella burnetii Q321]
Length = 458
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 99/164 (60%), Gaps = 8/164 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + VL P + R ++++P I IQ LLD + AY G + V+FDV F Y KL
Sbjct: 97 EDEKALRVLSPDQEPRATQYVPEIIKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSH 156
Query: 368 RNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
R+ + Q KR P DF LWK AKPGEP ++S WG+GRPGWHIECSAM+S
Sbjct: 157 RHLDELQAGARVEVSDSKRDPLDFVLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSIL 216
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG+DLKFPHHENE AQS A + +V W+H G L
Sbjct: 217 GQPFDIHGGGLDLKFPHHENEIAQSEA-GEEKPFVKLWMHAGLL 259
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KI+N +TK K F +K Y CG TVYD HIGH + D++ R L +
Sbjct: 1 MKIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGY-E 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQ 134
+ ++TDIDDKII +A KE +A+R+ +ILH+
Sbjct: 60 VTFVRNITDIDDKIIKRAGENKESPAALAERF-----IQILHE 97
>gi|418464825|ref|ZP_13035764.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|359756780|gb|EHK90937.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
RhAA1]
Length = 459
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 102/171 (59%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R +E ++ + +L P R + IP I +Q L+ AY+ + V FDV+SF
Sbjct: 91 RMVVEMYKDFDALNILRPDFEPRATHHIPEIIDIVQKLIQRGHAYVADNGDVMFDVESFK 150
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ I + +K++P DF LWK +KP EP ++S WGKGRPGWHIECS
Sbjct: 151 GYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM S G D+H GG DL FPHHENE AQSC H +Q+VNYWLH+G +
Sbjct: 211 AMNSKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-NQYVNYWLHSGMI 260
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K++N +T+ K F + + Y CG TVYD HIGH V D+I R L Y
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TD+DDKII +A KE + R + +
Sbjct: 61 LTYVRNITDVDDKIIKRALENKETCDQLVDRMVVEM 96
>gi|416893541|ref|ZP_11924691.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus ATCC 33389]
gi|347813831|gb|EGY30484.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus ATCC 33389]
Length = 469
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 103/171 (60%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R +E ++ + +L P R + IP I + ++ L+ AY+ + V FDV+SF
Sbjct: 101 RMVVEMYKDFDSLNILRPDFEPRATHHIPEIIAIVEKLIQRGHAYVADNGDVMFDVESFK 160
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ I + +K++P DF LWK +KP EP ++S WGKGRPGWHIECS
Sbjct: 161 EYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECS 220
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM S G D+H GG DL FPHHENE AQSC H +Q+VNYWLH+G +
Sbjct: 221 AMNSKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-NQYVNYWLHSGMI 270
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K++N +T+ K F + + Y CG TVYD HIGH V D+I R L Y
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYL-RYLGYD 70
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TD+DDKII +A KE + R + +
Sbjct: 71 LTYVRNITDVDDKIIKRALENKETCDQLVDRMVVEM 106
>gi|262199957|ref|YP_003271166.1| cysteinyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
gi|262083304|gb|ACY19273.1| cysteinyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
Length = 495
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 102/171 (59%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ EY M +FGVL P RVS I I IQ ++D AY D VYF V++F
Sbjct: 93 RFAAEYNADMARFGVLAPDIEPRVSTHIEDIVGLIQGIIDNGAAYP-VDGDVYFSVEAFK 151
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L G++ + A K++P DFALWKSAKPGE +++ WG+GRPGWHIECS
Sbjct: 152 PYGQLSGQSLDDLRAGARVEVDARKKAPADFALWKSAKPGELAWDAPWGRGRPGWHIECS 211
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM+ G D+H GG DL FPHHENE AQS A H + + YW+H G L
Sbjct: 212 AMSLRHLGQTFDIHGGGKDLVFPHHENEIAQSQAAHGEDTFARYWMHNGFL 262
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 30 TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
T I++Y+ I + KV F Y CGPT Y H+GHA + D+IRR L +
Sbjct: 2 TQIRLYDSIRREKVDFEPLQPGKASIYLCGPTPYAPAHLGHAYSAICFDVIRRALS-WLG 60
Query: 90 IHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ ++TD++DKI +A E+ +A+R+
Sbjct: 61 FEVTFVRNITDVEDKIFARAAENGEEPLALAERF 94
>gi|156063134|ref|XP_001597489.1| hypothetical protein SS1G_01683 [Sclerotinia sclerotiorum 1980]
gi|154697019|gb|EDN96757.1| hypothetical protein SS1G_01683 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 753
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 110/184 (59%), Gaps = 22/184 (11%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E ++ E M+ VL P TRV+ ++P I +F++ ++ AY SD SVYFD+ +F
Sbjct: 173 WEEQFMEDMDALNVLRPDVITRVTTYVPKIATFVEKIIQKGFAY-ESDGSVYFDIAAFEK 231
Query: 362 ----YFKL--WGRNENITQH----------AVKRSPFDFALWKSAKPGEPWYESAWGKGR 405
Y +L RN+ Q KR DFALWK +K GEP + S WG+GR
Sbjct: 232 AGNPYARLRPESRNDKALQEEGEGSLSKNLGGKRGAGDFALWKKSKAGEPSWPSPWGEGR 291
Query: 406 PGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF-----HNQSQWVNYWLH 460
PGWHIECS MAS G ++D+H+GGIDL FPHH+NE AQS A+ H +WVNY+LH
Sbjct: 292 PGWHIECSVMASDVLGSKMDIHSGGIDLAFPHHDNELAQSEAYFCEHEHGPHEWVNYFLH 351
Query: 461 TGHL 464
GHL
Sbjct: 352 MGHL 355
>gi|284919700|emb|CAX65477.1| hypothetical protein [Enterobacter hormaechei]
Length = 480
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 95/158 (60%), Gaps = 8/158 (5%)
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRN-- 369
K G+LPP R +E IP I S I+ LL + AYI + V F S Y KL G++
Sbjct: 122 KLGILPPNIEPRPTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDIT 181
Query: 370 -----ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQV 424
I + KR P DF LWK AKPGEP + S WG+GRPGWHIECSAM H+ G
Sbjct: 182 MLRAGTRIEVNEYKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHF 241
Query: 425 DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
D+H GG DL FPHHENE AQS + N +VNYWLHTG
Sbjct: 242 DIHGGGSDLIFPHHENEIAQSTS-ANDGPYVNYWLHTG 278
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
IK+ N + K + ++ + Y CG TVYD H+GHA V D+I R L F +
Sbjct: 22 IKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLR--FRGY 79
Query: 92 SIV-ISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ + ++TDIDDKII +A ED++++ +R
Sbjct: 80 DVTFVRNITDIDDKIIQRARDTGEDWRSLTER 111
>gi|61216275|sp|Q7NX82.2|SYC_CHRVO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 457
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 113/201 (56%), Gaps = 15/201 (7%)
Query: 278 LIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQT 337
+I+ +L +T +V E + + R + G+LPPT R + + + + I+
Sbjct: 74 IIKRALERGITPEQLVEETIADMR------QDAAALGLLPPTHEPRATHHVGGMVAMIEQ 127
Query: 338 LLDTKQAYIGSDHSVYFDVDSFPHYFKLWGR-------NENITQHAVKRSPFDFALWKSA 390
L+ +AY ++ VY+ V F Y KL GR E + KR P DF LWK+A
Sbjct: 128 LIANGKAYPAANGDVYYAVREFEGYGKLSGRTLDKLRAGERVEVDPNKRDPLDFVLWKAA 187
Query: 391 KPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHN 450
KPGEP ++S WGKGRPGWHIECS M+ H G D+H GG DL+FPHHENE AQS H
Sbjct: 188 KPGEPSWDSPWGKGRPGWHIECSVMSCHHLGEHFDIHGGGEDLQFPHHENEIAQSEGAHG 247
Query: 451 QSQWVNYWLHTGHLRGTDGTR 471
Q+VNYWLH G + DG +
Sbjct: 248 H-QYVNYWLHNGFIN-VDGEK 266
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ +YN +T+ K F + Y CG TVYD HIGHA D+I R L+ +
Sbjct: 2 LSLYNTLTRQKEAFKPIEPGKVSMYVCGMTVYDLCHIGHARMLAAFDVIYRWLKASGYDV 61
Query: 92 SIVISSVTDIDDKIINKA 109
+ V ++TDI+DKII +A
Sbjct: 62 NYV-RNITDIEDKIIKRA 78
>gi|345872177|ref|ZP_08824115.1| cysteinyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
gi|343919258|gb|EGV30008.1| cysteinyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
Length = 463
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 100/165 (60%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVLPP++ R + + I + ++TL+D AY+ + VY+ V F Y KL G
Sbjct: 98 EDGDALGVLPPSQEPRATGHMSEILAMVETLVDKGMAYVADNGDVYYAVGQFTGYGKLSG 157
Query: 368 RNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ + KR P DFALWKSAKPGEP +ES WG GRPGWHIECSAM++
Sbjct: 158 KDPQDLRAGARVEIGESKRDPLDFALWKSAKPGEPAWESPWGMGRPGWHIECSAMSTCCL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS + +VN W+H G +R
Sbjct: 218 GNHFDIHGGGADLQFPHHENEIAQSEGATGEP-FVNVWMHNGFVR 261
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++I+N +T+ K F ++ Y CG TVYD H+GHA V D++ R L +
Sbjct: 2 LQIHNSLTRQKDVFTPIEPGKVRMYVCGMTVYDYCHLGHARVMVVFDVVYRYLRALGYAV 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
+ V ++TDIDDKII +A E ++ + +R+
Sbjct: 62 TYV-RNITDIDDKIIRRAAENGETFQELTERFI 93
>gi|34497201|ref|NP_901416.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
gi|34103057|gb|AAQ59420.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
Length = 459
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 113/201 (56%), Gaps = 15/201 (7%)
Query: 278 LIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQT 337
+I+ +L +T +V E + + R + G+LPPT R + + + + I+
Sbjct: 76 IIKRALERGITPEQLVEETIADMR------QDAAALGLLPPTHEPRATHHVGGMVAMIEQ 129
Query: 338 LLDTKQAYIGSDHSVYFDVDSFPHYFKLWGR-------NENITQHAVKRSPFDFALWKSA 390
L+ +AY ++ VY+ V F Y KL GR E + KR P DF LWK+A
Sbjct: 130 LIANGKAYPAANGDVYYAVREFEGYGKLSGRTLDKLRAGERVEVDPNKRDPLDFVLWKAA 189
Query: 391 KPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHN 450
KPGEP ++S WGKGRPGWHIECS M+ H G D+H GG DL+FPHHENE AQS H
Sbjct: 190 KPGEPSWDSPWGKGRPGWHIECSVMSCHHLGEHFDIHGGGEDLQFPHHENEIAQSEGAHG 249
Query: 451 QSQWVNYWLHTGHLRGTDGTR 471
Q+VNYWLH G + DG +
Sbjct: 250 H-QYVNYWLHNGFIN-VDGEK 268
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ +YN +T+ K F + Y CG TVYD HIGHA D+I R L+ +
Sbjct: 4 LSLYNTLTRQKEAFKPIEPGKVSMYVCGMTVYDLCHIGHARMLAAFDVIYRWLKASGYDV 63
Query: 92 SIVISSVTDIDDKIINKA 109
+ V ++TDI+DKII +A
Sbjct: 64 NYV-RNITDIEDKIIKRA 80
>gi|416052811|ref|ZP_11578446.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|347991603|gb|EGY33066.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
Length = 469
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 102/171 (59%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R +E ++ + +L P R + IP I +Q L+ + AY+ + V FDV+SF
Sbjct: 101 RIVVEMYKDFDALNILRPDFEPRATHHIPEIIDIVQKLIQRRHAYVADNGDVMFDVESFK 160
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ I + +K++P DF LWK +KP EP ++S WGKGRPGWHIECS
Sbjct: 161 GYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECS 220
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM G D+H GG DL FPHHENE AQSC H +Q+VNYWLH+G +
Sbjct: 221 AMNGKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-NQYVNYWLHSGMI 270
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++++N +T+ K F + + Y CG TVYD HIGH V D+I R L Y
Sbjct: 12 LQLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYL-RYLGYD 70
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TD+DDKII +A KE + R + +
Sbjct: 71 LTYVRNITDVDDKIIKRALENKETCDQLVDRIVVEM 106
>gi|315633667|ref|ZP_07888957.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
gi|315477709|gb|EFU68451.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
Length = 459
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 103/171 (60%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R +E ++ + +L P R + IP I + ++ L+ AY+ + V FDV+SF
Sbjct: 91 RMVVEMYKDFDALNILRPDFEPRATHHIPEIIAIVEKLIQRGHAYVADNGDVMFDVESFK 150
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ I + +K++P DF LWK +KP EP ++S WGKGRPGWHIECS
Sbjct: 151 EYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM S G D+H GG DL FPHHENE AQSC H +Q+VNYWLH+G +
Sbjct: 211 AMNSKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-NQYVNYWLHSGMI 260
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K++N +T+ K F + + Y CG TVYD HIGH V D++ R L Y
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVVARYL-RYLGYE 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TD+DDKII +A KE + + R + +
Sbjct: 61 LTYVRNITDVDDKIIKRALENKETCEQLVDRMVVEM 96
>gi|322514668|ref|ZP_08067696.1| cysteine--tRNA ligase [Actinobacillus ureae ATCC 25976]
gi|322119366|gb|EFX91475.1| cysteine--tRNA ligase [Actinobacillus ureae ATCC 25976]
Length = 459
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 102/183 (55%), Gaps = 8/183 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R ++ IP I + ++ L+ AY+ +D V FDV+SF Y
Sbjct: 95 EMHKDFDDLNILRPDVEPRATKHIPEIVAMVEKLIANGHAYVAADDDVMFDVESFKKYGA 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q +VK++P DF LWK +K GEP ++S WG GRPGWHIECSAM S
Sbjct: 155 LSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAAR 477
G D+H GG DL FPHHENE AQSC H+ +VNYWLHTG L D
Sbjct: 215 KELGEHFDIHGGGSDLMFPHHENEIAQSCCAHS-GDYVNYWLHTGMLTIDDEKMSKSLGN 273
Query: 478 FIT 480
F T
Sbjct: 274 FFT 276
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN + + K F N N + Y CG TVYD H GH V D+I R L Y +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYL-RYLGYN 60
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 61 LRYVRNITDVDDKIIKRA 78
>gi|238019166|ref|ZP_04599592.1| hypothetical protein VEIDISOL_01029 [Veillonella dispar ATCC 17748]
gi|237863865|gb|EEP65155.1| hypothetical protein VEIDISOL_01029 [Veillonella dispar ATCC 17748]
Length = 497
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 99/171 (57%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY YFE M+ GV RVS I I + I TL++ AY D VY+ VD F
Sbjct: 108 RYIDSYFEVMDALGVQRADIYPRVSTHIEDIIAMISTLIEKGYAY-ELDGDVYYSVDKFE 166
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
HY +L GR I K++P DFALWK+AKPGEP++ES WG GRPGWHIECS
Sbjct: 167 HYGELSGRTLDDMEAGARIEVDGRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECS 226
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM+ + G + D H GG DL FPHHENE AQS Q V YWLH G +
Sbjct: 227 AMSQKYLGTEFDFHGGGSDLIFPHHENEIAQSEGCSGQHPSVRYWLHNGFI 277
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I +YN +T+ K F K Y CG T Y+ PHIG+A V D+IRR ++H +
Sbjct: 19 ITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGY-K 77
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKIIN +N + T+A RY
Sbjct: 78 VTYVQNFTDVDDKIINTSNGEGVSWDTIANRY 109
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPTR----GHAVCNVKLDIIRRILEHYFHIHSIVISSV 173
T K F P+ V G P G+A V D+IRR ++H + + +
Sbjct: 26 TRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGY-KVTYVQNF 84
Query: 174 TDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQKVVRKLAI 217
TD+DDKIIN +N + T+A RY + F+++ V++ I
Sbjct: 85 TDVDDKIINTSNGEGVSWDTIANRY-IDSYFEVMDALGVQRADI 127
>gi|402779984|ref|YP_006635530.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|402540896|gb|AFQ65045.1| Cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
Length = 471
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 95/158 (60%), Gaps = 8/158 (5%)
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRN-- 369
K G+LPP R +E IP I S I+ LL + AYI + V F S Y KL G++
Sbjct: 113 KLGILPPNIEPRPTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDIT 172
Query: 370 -----ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQV 424
I + KR P DF LWK AKPGEP + S WG+GRPGWHIECSAM H+ G
Sbjct: 173 MLRAGTRIEVNEYKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHF 232
Query: 425 DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
D+H GG DL FPHHENE AQS + N +VNYWLHTG
Sbjct: 233 DIHGGGSDLIFPHHENEIAQSTS-ANDGPYVNYWLHTG 269
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
IK+ N + K + ++ + Y CG TVYD H+GHA V D+I R L F +
Sbjct: 13 IKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLR--FRGY 70
Query: 92 SIV-ISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ + ++TDIDDKII +A ED++++ +R
Sbjct: 71 DVTFVRNITDIDDKIIQRARDTGEDWRSLTER 102
>gi|145492154|ref|XP_001432075.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399184|emb|CAK64678.1| unnamed protein product [Paramecium tetraurelia]
Length = 672
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 112/195 (57%), Gaps = 17/195 (8%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP- 360
+E ++F +ME + P TRVS+++P I +FI+ ++ AY S+ SVYFD F
Sbjct: 126 WEKDFFSAMEALNIELPDVITRVSDYVPEIVTFIEKIIANGYAY-DSNGSVYFDYFQFQI 184
Query: 361 ---HYF---------KLWGRNENITQ---HAVKRSPFDFALWKSAKPGEPWYESAWGKGR 405
H + L E +Q + K+SP DFALWK++KP EP + S WG+GR
Sbjct: 185 KLQHTYPKMRPETNADLLQEGEGESQANKQSEKKSPNDFALWKASKPEEPKWPSPWGEGR 244
Query: 406 PGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
PGWHIECS MAS G +DLH GGIDL FPHH+N AQ+ A N QW+NY++H GHL
Sbjct: 245 PGWHIECSVMASAILGNPIDLHAGGIDLIFPHHDNSLAQAEACFNCDQWINYFIHLGHLN 304
Query: 466 GTDGTRRLRAARFIT 480
D F+T
Sbjct: 305 IADRKMSKSLKNFLT 319
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 10/100 (10%)
Query: 27 GYDTGIKIYNPITKTK-VPFIIQNKNHLKWYACGPTVYDSPHIGHA---VCN------VK 76
Y TG+K+ N + ++ VPFI N + +Y CGPTVY + H+GHA CN +
Sbjct: 20 SYVTGLKLANSLKGSELVPFIPINGRQVNFYYCGPTVYSNSHLGHARQCYCNYVFRTYLG 79
Query: 77 LDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDY 116
+D+IRR L YF+ + + ++TDIDDKIIN A S +D+
Sbjct: 80 IDVIRRTLRDYFNYDLLSVMNITDIDDKIINGAKSANQDF 119
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 9/57 (15%)
Query: 144 GHA---VCN------VKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDY 191
GHA CN + +D+IRR L YF+ + + ++TDIDDKIIN A S +D+
Sbjct: 63 GHARQCYCNYVFRTYLGIDVIRRTLRDYFNYDLLSVMNITDIDDKIINGAKSANQDF 119
>gi|313893308|ref|ZP_07826883.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
gi|313442204|gb|EFR60621.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
Length = 482
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 99/171 (57%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY YFE M+ GV RVS I I + I TL++ AY D VY+ VD F
Sbjct: 93 RYIDSYFEVMDALGVQRADIYPRVSTHIEDIIAMISTLIEKGYAY-ELDGDVYYSVDKFE 151
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
HY +L GR I K++P DFALWK+AKPGEP++ES WG GRPGWHIECS
Sbjct: 152 HYGELSGRTLDDMEAGARIEVDGRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECS 211
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM+ + G + D H GG DL FPHHENE AQS Q V YWLH G +
Sbjct: 212 AMSQKYLGTEFDFHGGGSDLIFPHHENEIAQSEGCSGQHPAVRYWLHNGFI 262
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I +YN +T+ K F K Y CG T Y+ PHIG+A V D+IRR ++H +
Sbjct: 4 ITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGY-K 62
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKIIN +N + T+A RY
Sbjct: 63 VTYVQNFTDVDDKIINTSNGEGVSWDTIANRY 94
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPTR----GHAVCNVKLDIIRRILEHYFHIHSIVISSV 173
T K F P+ V G P G+A V D+IRR ++H + + +
Sbjct: 11 TRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGY-KVTYVQNF 69
Query: 174 TDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQKVVRKLAI 217
TD+DDKIIN +N + T+A RY + F+++ V++ I
Sbjct: 70 TDVDDKIINTSNGEGVSWDTIANRY-IDSYFEVMDALGVQRADI 112
>gi|148266184|ref|YP_001232890.1| cysteinyl-tRNA synthetase [Geobacter uraniireducens Rf4]
gi|189082065|sp|A5G949.1|SYC_GEOUR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146399684|gb|ABQ28317.1| cysteinyl-tRNA synthetase [Geobacter uraniireducens Rf4]
Length = 494
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 102/170 (60%), Gaps = 11/170 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY-IGSDHSVYFDVDSF 359
R+ E+ M + G+L PT + +E IP I + +QTL+D AY +G D V F V+ F
Sbjct: 92 RFIKEFDRDMAQLGLLLPTSQPKATEHIPEIITLVQTLIDKGFAYQMGGD--VNFCVEKF 149
Query: 360 PHYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
Y KL RN Q KR P DF LWK AKPGEP++ES WGKGRPGWHIEC
Sbjct: 150 DPYLKLSKRNLEDMQAGARIEVDERKRHPMDFVLWKEAKPGEPFWESPWGKGRPGWHIEC 209
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
SAM+ + G D+H GG DL FPHHENE AQS A + +V YWLH G
Sbjct: 210 SAMSMKYLGETFDIHGGGKDLVFPHHENEIAQSEAASGKP-FVKYWLHNG 258
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+++YN +T TK F+ +K Y CG TVYD HIGHA NV D+I R L +
Sbjct: 2 ALRVYNTLTGTKEDFVPIEPGKVKMYVCGVTVYDHCHIGHARANVVFDVIYRYLRS-LGL 60
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TDIDDKIIN+AN Y +++R+
Sbjct: 61 EVNYVRNYTDIDDKIINRANREGVAYDAISERF 93
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA NV D+I R L + + + TDIDDKIIN+AN Y +++R+
Sbjct: 40 GHARANVVFDVIYRYLRS-LGLEVNYVRNYTDIDDKIINRANREGVAYDAISERF 93
>gi|108706129|gb|ABF93924.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|108706132|gb|ABF93927.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
Length = 420
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 108/178 (60%), Gaps = 9/178 (5%)
Query: 310 MEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGR- 368
M + LPPT RV++ I HI I +++ +AY + VYF VD+FP Y L GR
Sbjct: 1 MAQLQCLPPTCEPRVTDHIEHIIELITKIMENGKAY-AMEGDVYFSVDTFPEYLSLSGRK 59
Query: 369 -NENITQHAV-----KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGG 422
+ N+ V KR+P DFALWK+AK GEP+++S WG+GRPGWHIECSAM++H+ G
Sbjct: 60 LDHNLAGSRVAVDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGH 119
Query: 423 QVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAARFIT 480
D+H GG DL FPHHENE AQS A + +S+ V W+H G + D F T
Sbjct: 120 VFDIHGGGKDLIFPHHENELAQSRAAYPESE-VKCWMHNGFVNKDDQKMSKSDKNFFT 176
>gi|444335137|ref|ZP_21150465.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
gi|443549406|gb|ELT58237.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
Length = 435
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 102/171 (59%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R +E ++ + +L P R + IP I ++ L+ AY+ + V FDV+SF
Sbjct: 67 RMVVEMYKDFDALNILRPDFEPRATHHIPEIIDIVEKLIQRGHAYVADNGDVMFDVESFK 126
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ I + +K++P DF LWK +KP EP ++S WGKGRPGWHIECS
Sbjct: 127 DYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECS 186
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM S G D+H GG DL FPHHENE AQSC H +Q+VNYWLH+G +
Sbjct: 187 AMNSKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-NQYVNYWLHSGMI 236
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKED 115
Y CG TVYD HIGH V D+I R L Y + ++TD+DDKII +A KE
Sbjct: 2 YVCGVTVYDLCHIGHGRTFVCFDVIARYL-RYLGYDLTYVRNITDVDDKIIKRALENKET 60
Query: 116 YKTVAKRYFLPL 127
+ R + +
Sbjct: 61 CDQLVDRMVVEM 72
>gi|416044172|ref|ZP_11574948.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|416058943|ref|ZP_11580697.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
gi|347996476|gb|EGY37551.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|347999327|gb|EGY40169.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
Length = 469
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 102/171 (59%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R +E ++ + +L P R + IP I ++ L+ AY+ + V FDV+SF
Sbjct: 101 RMVVEMYKDFDALNILRPDFEPRATHHIPEIIDIVEKLIQRGHAYVADNGDVMFDVESFK 160
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ I + +K++P DF LWK +KP EP ++S WGKGRPGWHIECS
Sbjct: 161 DYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECS 220
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM S G D+H GG DL FPHHENE AQSC H +Q+VNYWLH+G +
Sbjct: 221 AMNSKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-NQYVNYWLHSGMI 270
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K++N +T+ K F + + Y CG TVYD HIGH V D+I R L Y
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYL-RYLGYD 70
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TD+DDKII +A KE + R + +
Sbjct: 71 LTYVRNITDVDDKIIKRALENKETCDQLVDRMVVEM 106
>gi|50084652|ref|YP_046162.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ADP1]
gi|61216194|sp|Q6FC71.1|SYC_ACIAD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|49530628|emb|CAG68340.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ADP1]
Length = 473
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 101/173 (58%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E K G P A + +E+I +Q+ I TL+D AY S+ VYF+V F Y +L G
Sbjct: 100 EDAAKLGCAEPDEAPKATEYIGEMQNMISTLVDKGSAYPASNGDVYFEVSKFEKYGRLSG 159
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R +E + K+ PFDF LWK AKP EP + S WG GRPGWHIECSAM++
Sbjct: 160 RKLEDMQAGASERVDIEVEKKHPFDFVLWKGAKPNEPSWVSPWGNGRPGWHIECSAMSTC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A + Q+VNYW+H G + DG +
Sbjct: 220 CLGNHFDIHGGGSDLTFPHHENEIAQSEASTGE-QYVNYWMHVGFI-NVDGEK 270
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ + H+ Y CG TVYD HIGHA V D IIR + + +
Sbjct: 6 LYNSEQRKKVEFVPRKPGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWDVR- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I ++TDIDDKII +AN E + + R+
Sbjct: 65 -YIRNITDIDDKIIKRANENNETIQQLTSRF 94
>gi|118578479|ref|YP_899729.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
gi|171704442|sp|A1AK01.1|SYC_PELPD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|118501189|gb|ABK97671.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
Length = 493
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 106/169 (62%), Gaps = 9/169 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY + + M + G+ PT + ++ + I S I+TL+ AY SD VY+ V+SFP
Sbjct: 92 RYIEAFNQDMARLGLAKPTVEPKATDHMGGIISVIETLIAKGHAY-ESDGDVYYAVESFP 150
Query: 361 HYFKLWGRN-ENITQHAV------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L GRN E++ A KR+P DFALWK +KPGEP ++S WG GRPGWHIECS
Sbjct: 151 SYLRLSGRNLEDMLAGARVEVDDRKRNPMDFALWKGSKPGEPSWDSPWGAGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM+ + G D+H GG DL FPHHENE AQS A N Q+V YW+H G
Sbjct: 211 AMSMEYLGKTFDIHGGGKDLVFPHHENEIAQSEA-ANGCQFVRYWMHNG 258
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++IYN +T K F+ + Y CG TVYD HIGHA NV D+I R L Y
Sbjct: 3 LRIYNTLTGEKDTFVPLHPGKAGMYVCGVTVYDYCHIGHARANVVFDVIYRYL-GYSGYA 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TDIDDKIIN+AN DY T+++RY
Sbjct: 62 VTYVRNFTDIDDKIINRANQEGVDYTTISERY 93
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA NV D+I R L Y + + TDIDDKIIN+AN DY T+++RY
Sbjct: 40 GHARANVVFDVIYRYL-GYSGYAVTYVRNFTDIDDKIINRANQEGVDYTTISERY 93
>gi|429732608|ref|ZP_19267211.1| cysteine--tRNA ligase [Aggregatibacter actinomycetemcomitans Y4]
gi|429155731|gb|EKX98388.1| cysteine--tRNA ligase [Aggregatibacter actinomycetemcomitans Y4]
Length = 459
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 102/171 (59%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R +E ++ + +L P R + IP I ++ L+ AY+ + V FDV+SF
Sbjct: 91 RMVVEMYKDFDALNILRPDFEPRATHHIPEIIDIVEKLIQRGHAYVADNGDVMFDVESFK 150
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ I + +K++P DF LWK +KP EP ++S WGKGRPGWHIECS
Sbjct: 151 DYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM S G D+H GG DL FPHHENE AQSC H +Q+VNYWLH+G +
Sbjct: 211 AMNSKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-NQYVNYWLHSGMI 260
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K++N +T+ K F + + Y CG TVYD HIGH V D+I R L Y
Sbjct: 2 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TD+DDKII +A KE + R + +
Sbjct: 61 LTYVRNITDVDDKIIKRALENKETCDQLVDRMVVEM 96
>gi|417957999|ref|ZP_12600916.1| cysteine--tRNA ligase [Neisseria weaveri ATCC 51223]
gi|343967391|gb|EGV35636.1| cysteine--tRNA ligase [Neisseria weaveri ATCC 51223]
Length = 470
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 98/177 (55%), Gaps = 19/177 (10%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E GV+ P + +E + + IQ L+D +AY + VY+ V F Y +L G
Sbjct: 98 EDAAALGVIRPDVEPKATEHVQQMLGMIQRLIDNGKAYAADNGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + + KR P DF LWK+AKPGEP +ES WG+GRPGWHIECSAM+ F
Sbjct: 158 KSLDDLRAGERVEVDSFKRDPLDFVLWKAAKPGEPAWESPWGQGRPGWHIECSAMSEELF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS------------QWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQSC H S V YWLH G +R
Sbjct: 218 GDTFDIHGGGADLQFPHHENEIAQSCGAHGGSCGHNRSGGKAIESHVKYWLHNGFIR 274
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ IYN +T+ K FI + +++ Y CG TVYD H+GHA V D+I R L +
Sbjct: 2 LNIYNTLTRQKEEFIPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRAQGYPL 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ V ++TDIDDKII +A E + +R+ +
Sbjct: 62 TYV-RNITDIDDKIIARAAENGETIGELTERFIRAM 96
>gi|416069686|ref|ZP_11583362.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|347999795|gb|EGY40610.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
Length = 469
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 102/171 (59%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R +E ++ + +L P R + IP I ++ L+ AY+ + V FDV+SF
Sbjct: 101 RMVVEMYKDFDALNILRPDFEPRATHHIPEIIDIVEKLIQRGHAYVADNGDVMFDVESFK 160
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ I + +K++P DF LWK +KP EP ++S WGKGRPGWHIECS
Sbjct: 161 DYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECS 220
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM S G D+H GG DL FPHHENE AQSC H +Q+VNYWLH+G +
Sbjct: 221 AMNSKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-NQYVNYWLHSGMI 270
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K++N +T+ K F + + Y CG TVYD HIGH V D+I R L Y
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYL-RYLGYD 70
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TD+DDKII +A KE + R + +
Sbjct: 71 LTYVRNITDVDDKIIKRALENKETCDQLVDRMVVEM 106
>gi|387120512|ref|YP_006286395.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|415765542|ref|ZP_11482787.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|416040248|ref|ZP_11574423.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|347993896|gb|EGY35223.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|348653831|gb|EGY69504.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|385875004|gb|AFI86563.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 469
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 102/171 (59%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R +E ++ + +L P R + IP I ++ L+ AY+ + V FDV+SF
Sbjct: 101 RMVVEMYKDFDALNILRPDFEPRATHHIPEIIDIVEKLIQRGHAYVADNGDVMFDVESFK 160
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ I + +K++P DF LWK +KP EP ++S WGKGRPGWHIECS
Sbjct: 161 DYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECS 220
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM S G D+H GG DL FPHHENE AQSC H +Q+VNYWLH+G +
Sbjct: 221 AMNSKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-NQYVNYWLHSGMI 270
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K++N +T+ K F + + Y CG TVYD HIGH V D+I R L Y
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYL-RYLGYD 70
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TD+DDKII +A KE + R + +
Sbjct: 71 LTYVRNITDVDDKIIKRALENKETCDQLVDRMVVEM 106
>gi|157145196|ref|YP_001452515.1| hypothetical protein CKO_00929 [Citrobacter koseri ATCC BAA-895]
gi|425075962|ref|ZP_18479065.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425086595|ref|ZP_18489688.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|444350682|ref|YP_007386826.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Enterobacter aerogenes
EA1509E]
gi|157082401|gb|ABV12079.1| hypothetical protein CKO_00929 [Citrobacter koseri ATCC BAA-895]
gi|204636645|gb|ACI01739.1| putative cysteinyl-tRNA synthetase class Ia [Escherichia coli]
gi|405593466|gb|EKB66907.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405603319|gb|EKB76440.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|443901512|emb|CCG29286.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Enterobacter aerogenes
EA1509E]
Length = 460
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 95/158 (60%), Gaps = 8/158 (5%)
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRN-- 369
K G+LPP R +E IP I S I+ LL + AYI + V F S Y KL G++
Sbjct: 102 KLGILPPNIEPRPTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDIT 161
Query: 370 -----ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQV 424
I + KR P DF LWK AKPGEP + S WG+GRPGWHIECSAM H+ G
Sbjct: 162 MLRAGTRIEVNEYKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHF 221
Query: 425 DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
D+H GG DL FPHHENE AQS + N +VNYWLHTG
Sbjct: 222 DIHGGGSDLIFPHHENEIAQSTS-ANDGPYVNYWLHTG 258
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
IK+ N + K + ++ + Y CG TVYD H+GHA V D+I R L F +
Sbjct: 2 IKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLR--FRGY 59
Query: 92 SIV-ISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ + ++TDIDDKII +A ED++++ +R
Sbjct: 60 DVTFVRNITDIDDKIIQRARDTGEDWRSLTER 91
>gi|416999202|ref|ZP_11939871.1| cysteine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
gi|333977355|gb|EGL78214.1| cysteine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
Length = 482
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 99/171 (57%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY YFE M+ GV RVS I I + I TL++ AY D VY+ VD F
Sbjct: 93 RYIDSYFEVMDALGVQRADIYPRVSTHIEDIIAMISTLIEKGYAY-ELDGDVYYSVDKFE 151
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
HY +L GR I K++P DFALWK+AKPGEP++ES WG GRPGWHIECS
Sbjct: 152 HYGELSGRTLDDMEAGARIEVDGRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECS 211
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM+ + G + D H GG DL FPHHENE AQS Q V YWLH G +
Sbjct: 212 AMSQKYLGTEFDFHGGGSDLIFPHHENEIAQSEGCSGQHPSVRYWLHNGFI 262
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I +YN +T+ K F K Y CG T Y+ PHIG+A V D+IRR ++H +
Sbjct: 4 ITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGY-K 62
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKIIN +N + T+A RY
Sbjct: 63 VTYVQNFTDVDDKIINTSNGEGVSWDTIANRY 94
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPTR----GHAVCNVKLDIIRRILEHYFHIHSIVISSV 173
T K F P+ V G P G+A V D+IRR ++H + + +
Sbjct: 11 TRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGY-KVTYVQNF 69
Query: 174 TDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQKVVRKLAI 217
TD+DDKIIN +N + T+A RY + F+++ V++ I
Sbjct: 70 TDVDDKIINTSNGEGVSWDTIANRY-IDSYFEVMDALGVQRADI 112
>gi|307256969|ref|ZP_07538746.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306864544|gb|EFM96450.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
Length = 459
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 101/183 (55%), Gaps = 8/183 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R ++ IP I + ++ L+ AY+ +D V FDV+SF Y
Sbjct: 95 EMHKDFDDLNILRPDVEPRATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGA 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q +VK++P DF LWK +K GEP ++S WG GRPGWHIECSAM S
Sbjct: 155 LSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAAR 477
G D+H GG DL FPHHENE AQSC H +VNYWLHTG L D
Sbjct: 215 KELGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-GDYVNYWLHTGMLTIDDEKMSKSLGN 273
Query: 478 FIT 480
F T
Sbjct: 274 FFT 276
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN + + K F N N + Y CG TVYD H GH V D+I R L Y +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYL-RYLGYN 60
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 61 LRYVRNITDVDDKIIKRA 78
>gi|345874764|ref|ZP_08826564.1| cysteine--tRNA ligase [Neisseria weaveri LMG 5135]
gi|343970123|gb|EGV38321.1| cysteine--tRNA ligase [Neisseria weaveri LMG 5135]
Length = 470
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 97/177 (54%), Gaps = 19/177 (10%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E GV+ P + +E + + IQ L+D +AY + VY+ V F Y +L G
Sbjct: 98 EDAAALGVIRPDVEPKATEHVQQMLGMIQRLIDNGKAYAADNGDVYYAVREFATYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AKPGEP +ES WG+GRPGWHIECSAM+ F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKPGEPAWESPWGQGRPGWHIECSAMSEELF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS------------QWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQSC H S V YWLH G +R
Sbjct: 218 GDTFDIHGGGADLQFPHHENEIAQSCGAHGGSCGHNRSGGKAIESHVKYWLHNGFIR 274
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ IYN +T+ K FI + +++ Y CG TVYD H+GHA V D+I R L +
Sbjct: 2 LNIYNTLTRQKEEFIPIDSKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRAQGYPL 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ V ++TDIDDKII +A E + +R+ +
Sbjct: 62 TYV-RNITDIDDKIIARAAENGETIGELTERFIRAM 96
>gi|260424802|ref|ZP_05733345.2| cysteine--tRNA ligase [Dialister invisus DSM 15470]
gi|260403249|gb|EEW96796.1| cysteine--tRNA ligase [Dialister invisus DSM 15470]
Length = 488
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 104/172 (60%), Gaps = 11/172 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI-GSDHSVYFDVDSF 359
RY YF+ M+ V RVS+ + I +Q L+D AY+ G+D VY+D+ +F
Sbjct: 100 RYIDAYFQVMDAMHVRRADVYPRVSDHMQDIIDMVQGLIDKGHAYVLGND--VYYDISTF 157
Query: 360 PHYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
HY L GR I + KR+P DFALWK AKPGEP++ES WGKGRPGWHIEC
Sbjct: 158 EHYGALSGRKIDDMLAGARIEVNEGKRNPGDFALWKGAKPGEPFWESPWGKGRPGWHIEC 217
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
SAM+ H+ G D H GG DL FPHHENE AQS ++VNYWLH G +
Sbjct: 218 SAMSVHYLGKTFDFHGGGSDLIFPHHENEIAQSEGC-TGCKFVNYWLHNGFI 268
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
IK+YN +T K F +K Y CG T Y+ PHIG+A V D+I R L+H +
Sbjct: 11 IKVYNTLTGEKTVFRPLVPGEVKIYVCGVTPYNHPHIGNARPAVTWDVICRYLKHIGYKV 70
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
V + TD+DDKIINKAN+ D+KT++ RY
Sbjct: 71 EFV-QNFTDVDDKIINKANAEGSDWKTISDRYI 102
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPTR----GHAVCNVKLDIIRRILEHYFHIHSIVISSV 173
T K F PL+ + V G P G+A V D+I R L+H + V +
Sbjct: 18 TGEKTVFRPLVPGEVKIYVCGVTPYNHPHIGNARPAVTWDVICRYLKHIGYKVEFV-QNF 76
Query: 174 TDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQKVVRKLAI 217
TD+DDKIINKAN+ D+KT++ RY + F+++ VR+ +
Sbjct: 77 TDVDDKIINKANAEGSDWKTISDRY-IDAYFQVMDAMHVRRADV 119
>gi|419136924|ref|ZP_13681722.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5E]
gi|377984810|gb|EHV48038.1| cysteinyl-tRNA synthetase [Escherichia coli DEC5E]
Length = 460
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 95/158 (60%), Gaps = 8/158 (5%)
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRN-- 369
K G+LPP R +E IP I S I+ LL + AYI + V F S Y KL G++
Sbjct: 102 KLGILPPNIEPRPTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDIT 161
Query: 370 -----ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQV 424
I + KR P DF LWK AKPGEP + S WG+GRPGWHIECSAM H+ G
Sbjct: 162 MLRAGTRIEVNEYKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHF 221
Query: 425 DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
D+H GG DL FPHHENE AQS + N +VNYWLHTG
Sbjct: 222 DIHGGGSDLIFPHHENEIAQSTS-ANDGPYVNYWLHTG 258
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
IK+ N + K + ++ + Y CG TVYD H+GHA V D+I R L F +
Sbjct: 2 IKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLR--FRGY 59
Query: 92 SIV-ISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ + ++TDIDDKII +A ED++++ +R
Sbjct: 60 DVTFVRNITDIDDKIIQRARDTGEDWRSLTER 91
>gi|340507698|gb|EGR33621.1| hypothetical protein IMG5_047670 [Ichthyophthirius multifiliis]
Length = 885
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 115/190 (60%), Gaps = 24/190 (12%)
Query: 316 LPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF-----PHYFKLWGRNE 370
+ P RVSE+IP I ++I+ +++ AY S+ SVYF+V+ F Y KL ++
Sbjct: 68 IQPDAIVRVSEYIPEIINYIKKIIENGFAY-ESNQSVYFNVEKFHCTQNQCYAKLEPQSV 126
Query: 371 N-------------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
N + + KRS DFALWK++KP EP ++S WGKGRPGWHIECS MAS
Sbjct: 127 NNKQKLDDGEGKLGVKNDSEKRSQKDFALWKASKPNEPEWDSPWGKGRPGWHIECSTMAS 186
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQ---SQWVNYWLHTGHL--RGTDGTRR 472
G +D+H GG DLKFPHH+NE AQS A+ N+ +QWVNY++HTGHL G +
Sbjct: 187 EILGYPLDIHMGGEDLKFPHHDNEIAQSEAYFNKEENNQWVNYFMHTGHLHIEGLKMAKS 246
Query: 473 LRAARFITNL 482
L+ I NL
Sbjct: 247 LKNFISIKNL 256
>gi|224111652|ref|XP_002315932.1| predicted protein [Populus trichocarpa]
gi|222864972|gb|EEF02103.1| predicted protein [Populus trichocarpa]
Length = 532
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 109/187 (58%), Gaps = 9/187 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ EY M L PT RV++ + I+ I +++ AY + V+F V+ P
Sbjct: 96 RFCEEYLVDMTDLQCLIPTHQPRVTDHVEQIKDMITQIIEKDCAY-AVEGDVFFAVNKSP 154
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
+Y +L G+ E + + KR+P DFALWK+AKPGEP +ES WG GRPGWHIECS
Sbjct: 155 NYGQLSGQRLENNRAGERVAVDSRKRNPADFALWKAAKPGEPSWESPWGPGRPGWHIECS 214
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
AM++ + + D+H GGIDL FPHHENE AQSCA +S V+YW+H GH+ +
Sbjct: 215 AMSAQYLTFKFDIHGGGIDLIFPHHENEIAQSCAACEESS-VSYWMHNGHVTNNNEKMSK 273
Query: 474 RAARFIT 480
F T
Sbjct: 274 SLGNFFT 280
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T+ K F + + Y CG T YD H+GHA V DI+ R L+H +
Sbjct: 7 LKLYNSMTQQKEVFKSRIPGKVSMYVCGVTSYDFSHLGHARAAVAFDILFRYLQHLGY-E 65
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TDIDDKII +AN + ED +++ R+
Sbjct: 66 VTYVRNFTDIDDKIIRRANEIGEDPLSLSSRF 97
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V DI+ R L+H + + + TDIDDKII +AN + ED +++ R+
Sbjct: 44 GHARAAVAFDILFRYLQHLGY-EVTYVRNFTDIDDKIIRRANEIGEDPLSLSSRF 97
>gi|303253060|ref|ZP_07339211.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|307247903|ref|ZP_07529938.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|302648092|gb|EFL78297.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|306855594|gb|EFM87762.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
Length = 459
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 101/183 (55%), Gaps = 8/183 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R ++ IP I + ++ L+ AY+ +D V FDV+SF Y
Sbjct: 95 EMHKDFDDLNILRPDVEPRATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGA 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q +VK++P DF LWK +K GEP ++S WG GRPGWHIECSAM S
Sbjct: 155 LSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAAR 477
G D+H GG DL FPHHENE AQSC H +VNYWLHTG L D
Sbjct: 215 KELGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-GDYVNYWLHTGMLTIDDEKMSKSLGN 273
Query: 478 FIT 480
F T
Sbjct: 274 FFT 276
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN + + K F N N + Y CG TVYD H GH V D+I R L Y +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYL-RYLGYN 60
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 61 LRYVRNITDVDDKIIKRA 78
>gi|9758060|dbj|BAB08639.1| cysteine-tRNA ligase [Arabidopsis thaliana]
Length = 500
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 106/171 (61%), Gaps = 9/171 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ EY M LPPT RVSE + +I I+ +++ Y+ + V+F VD P
Sbjct: 97 RFCDEYLVDMGALQCLPPTHQPRVSEHMDNIIKMIEKIIEKDCGYV-VEGDVFFSVDKSP 155
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
+Y KL G+ E + + KR+P DFALWK+AKP EP +ES WG GRPGWHIECS
Sbjct: 156 NYGKLSGQLLEHTRAGERVAVDSRKRNPADFALWKAAKPDEPSWESPWGPGRPGWHIECS 215
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM+ H+ + D+H GG DLKFPHHENE AQ+CA S VNYWLH GH+
Sbjct: 216 AMSVHYLSPKFDIHGGGADLKFPHHENEIAQTCAACEDS-GVNYWLHNGHV 265
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T+ K I + Y CG T YD HIGHA V D++ R L+H
Sbjct: 8 LKLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYLKH-LDYD 66
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKII++AN ED ++ R+
Sbjct: 67 VTFVRNFTDVDDKIIDRANKNGEDPLDLSNRF 98
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V D++ R L+H + + TD+DDKII++AN ED ++ R+
Sbjct: 45 GHARAAVSFDVLYRYLKH-LDYDVTFVRNFTDVDDKIIDRANKNGEDPLDLSNRF 98
>gi|190150242|ref|YP_001968767.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|307263581|ref|ZP_07545196.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|229558612|sp|B3GXR0.1|SYC_ACTP7 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|189915373|gb|ACE61625.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|306871224|gb|EFN02953.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 459
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 101/183 (55%), Gaps = 8/183 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R ++ IP I + ++ L+ AY+ +D V FDV+SF Y
Sbjct: 95 EMHKDFDDLNILRPDVEPRATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGA 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q +VK++P DF LWK +K GEP ++S WG GRPGWHIECSAM S
Sbjct: 155 LSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAAR 477
G D+H GG DL FPHHENE AQSC H +VNYWLHTG L D
Sbjct: 215 KELGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-GDYVNYWLHTGMLTIDDEKMSKSLGN 273
Query: 478 FIT 480
F T
Sbjct: 274 FFT 276
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN + + K F N N + Y CG TVYD H GH V D+I R L Y +
Sbjct: 2 LKIYNTLKREKEEFKPINSNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYL-RYLGYN 60
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 61 LRYVRNITDVDDKIIKRA 78
>gi|261493400|ref|ZP_05989926.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261496665|ref|ZP_05993045.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261307868|gb|EEY09191.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261311044|gb|EEY12221.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 469
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 98/167 (58%), Gaps = 8/167 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R ++ IP I + ++ L+ AY+ +D V FDV+SF Y
Sbjct: 105 EMHKDFDALNILRPDVEPRATKHIPEIIAMVEKLIHNGHAYVAADGDVMFDVESFQKYGA 164
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q ++K++P DF LWK +K GEP +ES WG GRPGWHIECSAM S
Sbjct: 165 LSRQNLEQLQAGARVEIKSIKKNPMDFVLWKMSKAGEPSWESPWGNGRPGWHIECSAMNS 224
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG DL FPHHENE AQSC H +VNYWLHTG L
Sbjct: 225 KELGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-GDYVNYWLHTGML 270
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 29 DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
D +KIYN + + K F N N + Y CG TVYD H GH V D+I R L Y
Sbjct: 9 DFMLKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYL-RYS 67
Query: 89 HIHSIVISSVTDIDDKIINKA 109
+ + ++TD+DDKII +A
Sbjct: 68 GYNLRYVRNITDVDDKIIKRA 88
>gi|46143889|ref|ZP_00133878.2| COG0215: Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208389|ref|YP_001053614.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|187629818|sp|A3N0S3.1|SYC_ACTP2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|126097181|gb|ABN74009.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
5b str. L20]
Length = 459
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 101/183 (55%), Gaps = 8/183 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R ++ IP I + ++ L+ AY+ +D V FDV+SF Y
Sbjct: 95 EMHKDFDDLNILRPDVEPRATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGA 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q +VK++P DF LWK +K GEP ++S WG GRPGWHIECSAM S
Sbjct: 155 LSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAAR 477
G D+H GG DL FPHHENE AQSC H +VNYWLHTG L D
Sbjct: 215 KELGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-GDYVNYWLHTGMLTIDDEKMSKSLGN 273
Query: 478 FIT 480
F T
Sbjct: 274 FFT 276
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN + + K F N N + Y CG TVYD H GH V D+I R L Y +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYL-RYLGYN 60
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 61 LRYVRNITDVDDKIIKRA 78
>gi|416083517|ref|ZP_11586841.1| LOW QUALITY PROTEIN: cysteinyl-tRNA synthetase [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|348010590|gb|EGY50624.1| LOW QUALITY PROTEIN: cysteinyl-tRNA synthetase [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
Length = 290
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 101/169 (59%), Gaps = 8/169 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R +E ++ + +L P R + IP I +Q L+ AY+ + V FDV+SF
Sbjct: 101 RMVVEMYKDFDALNILRPDFEPRATHHIPEIIDIVQKLIQRGHAYVADNGDVMFDVESFK 160
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ I + +K++P DF LWK +KP EP ++S WGKGRPGWHIECS
Sbjct: 161 DYGKLSRQDLEQLQAGARIEINEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECS 220
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM S G D+H GG DL FPHHENE AQSC H +Q+VNYWLH+G
Sbjct: 221 AMNSKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-NQYVNYWLHSG 268
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K++N +T+ K F + + Y CG TVYD HIGH V D+I R L Y
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLR-YLGYD 70
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLI--FKILHQKVVGSIPTRGHAVCN 149
+ ++TD+DDKII A KE + R + + F L+ P H +
Sbjct: 71 LTYVRNITDVDDKIIKHALENKETCDQLVDRMVVEMYKDFDALNILRPDFEPRATHHIPE 130
Query: 150 VKLDIIRRILE 160
+ +DI++++++
Sbjct: 131 I-IDIVQKLIQ 140
>gi|307104948|gb|EFN53199.1| hypothetical protein CHLNCDRAFT_137034 [Chlorella variabilis]
Length = 606
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 105/195 (53%), Gaps = 35/195 (17%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY-IGSDHSVYFDVDSF 359
R+ E+ ME G LPP R +E+IPH+ + IQ ++D AY +G D V+FDV S
Sbjct: 165 RFIAEFHADMELLGCLPPDLEPRATEYIPHMVAMIQRIIDHGHAYAVGGD--VFFDVASL 222
Query: 360 PHYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
P Y +L GR+ E + KR DFALWK+AKPGEP +ES WG GRPGWHIEC
Sbjct: 223 PGYGRLSGRSQEDNRAGERVAVDERKRGAADFALWKAAKPGEPTWESPWGPGRPGWHIEC 282
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHN---------------------- 450
SAM G +D+H GG DL FPHHENE AQS A
Sbjct: 283 SAMIREVLGEVIDIHGGGRDLVFPHHENELAQSRAASGACSCGHDHGAATASASASNGSG 342
Query: 451 ---QSQWVNYWLHTG 462
Q ++V YWLH G
Sbjct: 343 GGGQDEFVRYWLHNG 357
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 34 IYNPITKTKVPFI--IQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++N +T+ K F N + Y CG TVYD HIGHA V D+I R+L H +
Sbjct: 76 LHNTLTRQKEVFRPRADQGNRVSMYVCGVTVYDYSHIGHARAYVAFDVIYRLLRHLGYAV 135
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIP----TRGHAV 147
+ V + TD+DDKII +A + E+ +A+R+ + +++G +P R
Sbjct: 136 TYV-RNFTDVDDKIIARAAAAGEEPLALARRFIAEFHADM---ELLGCLPPDLEPRATEY 191
Query: 148 CNVKLDIIRRILEH 161
+ +I+RI++H
Sbjct: 192 IPHMVAMIQRIIDH 205
>gi|165976334|ref|YP_001651927.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|307261399|ref|ZP_07543074.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|229558613|sp|B0BPJ8.1|SYC_ACTPJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|165876435|gb|ABY69483.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|306869130|gb|EFN00932.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
Length = 459
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 101/183 (55%), Gaps = 8/183 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R ++ IP I + ++ L+ AY+ +D V FDV+SF Y
Sbjct: 95 EMHKDFDDLNILRPDVEPRATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGA 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q +VK++P DF LWK +K GEP ++S WG GRPGWHIECSAM S
Sbjct: 155 LSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAAR 477
G D+H GG DL FPHHENE AQSC H +VNYWLHTG L D
Sbjct: 215 KELGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-GDYVNYWLHTGMLTIDDEKMSKSLGN 273
Query: 478 FIT 480
F T
Sbjct: 274 FFT 276
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN + + K F N N + Y CG TVYD H GH V D+I R L Y +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYL-RYLGYN 60
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 61 LRYVRNITDVDDKIIKRA 78
>gi|407692004|ref|YP_006816793.1| cysteinyl-tRNA ligase [Actinobacillus suis H91-0380]
gi|407388061|gb|AFU18554.1| cysteinyl-tRNA ligase [Actinobacillus suis H91-0380]
Length = 459
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 101/183 (55%), Gaps = 8/183 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R ++ IP I + ++ L+ AY+ +D V FDV+SF Y
Sbjct: 95 EMHKDFDDLNILRPDVEPRATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGA 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q +VK++P DF LWK +K GEP ++S WG GRPGWHIECSAM S
Sbjct: 155 LSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAAR 477
G D+H GG DL FPHHENE AQSC H +VNYWLHTG L D
Sbjct: 215 KELGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-GDYVNYWLHTGMLTIDDEKMSKSLGN 273
Query: 478 FIT 480
F T
Sbjct: 274 FFT 276
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN + + K F N N + Y CG TVYD H GH V D+I R L Y +
Sbjct: 2 LKIYNTLKREKEEFKPINSNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYL-RYLGYN 60
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 61 LRYVRNITDVDDKIIKRA 78
>gi|381401996|ref|ZP_09926885.1| cysteinyl-tRNA synthetase [Kingella kingae PYKK081]
gi|380833122|gb|EIC13001.1| cysteinyl-tRNA synthetase [Kingella kingae PYKK081]
Length = 469
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 106/197 (53%), Gaps = 24/197 (12%)
Query: 287 LTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI 346
+T++ + EF+ E +K GVL P + +E IP + I+ L+ +AY
Sbjct: 83 ITIQELTEEFITAMN------EDSDKLGVLRPDVEPKATEHIPQMIQMIEDLIANGKAYP 136
Query: 347 GSDHSVYFDVDSFPHYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYES 399
++ VY+ V F Y +L G++ E + KR P DF LWK+AKP EP + S
Sbjct: 137 AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVDVDTNKRDPLDFVLWKAAKPEEPHWNS 196
Query: 400 AWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS------- 452
WGKGRPGWHIECSAM FG D+H GG DL+FPHHENE AQSC HN S
Sbjct: 197 PWGKGRPGWHIECSAMGGELFGQTFDIHGGGADLQFPHHENEIAQSCGAHNSSCNHNHGD 256
Query: 453 ----QWVNYWLHTGHLR 465
V YWLH G +R
Sbjct: 257 KIIQSHVKYWLHNGFIR 273
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++IYN +T+ K F + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 2 LQIYNTLTRQKEKFEPLDPKNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGYPL 61
Query: 92 SIVISSVTDIDDKIINKANS 111
+ V ++TDIDDKII +AN
Sbjct: 62 TYV-RNITDIDDKIIKRANE 80
>gi|338813808|ref|ZP_08625892.1| cysteinyl-tRNA synthetase [Acetonema longum DSM 6540]
gi|337274202|gb|EGO62755.1| cysteinyl-tRNA synthetase [Acetonema longum DSM 6540]
Length = 480
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 103/170 (60%), Gaps = 9/170 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY YFE M+ + T RVSE +P I +QTL++ AY+ +D VY+ V+ F
Sbjct: 92 RYIASYFEVMDPLRIRRATVYPRVSEHMPQIIDMVQTLINKGYAYL-ADGDVYYSVEKFH 150
Query: 361 HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR+ + + KR P DFALWKS KPGEP ++S WG GRPGWHIECS
Sbjct: 151 DYGKLSGRSLDDMKAGARVEVDERKRHPMDFALWKSVKPGEPSWDSPWGPGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHN-QSQWVNYWLHTG 462
AM+ H+ G D H GG DL FPHHENE AQS AF + V+YWLH G
Sbjct: 211 AMSFHYLGKSFDFHGGGSDLIFPHHENEIAQSEAFCGCEEPCVHYWLHNG 260
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHY-FHI 90
+K+YN +TK K F+ +K Y CG T Y+ PHIG+A V D+IRR EH + +
Sbjct: 3 LKVYNTLTKKKGKFVPSEPGKVKMYVCGVTPYNHPHIGNARPFVTWDVIRRYFEHLGYQV 62
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + + TD+DDKIIN AN+ + + +A RY
Sbjct: 63 YH--VQNFTDVDDKIINAANAEQVSWDVIANRY 93
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 141 PTRGHAVCNVKLDIIRRILEHY-FHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 199
P G+A V D+IRR EH + ++ + + TD+DDKIIN AN+ + + +A RY
Sbjct: 37 PHIGNARPFVTWDVIRRYFEHLGYQVYHV--QNFTDVDDKIINAANAEQVSWDVIANRYI 94
Query: 200 LRLIFKILHQKVVRKLAI 217
F+++ +R+ +
Sbjct: 95 ASY-FEVMDPLRIRRATV 111
>gi|333376196|ref|ZP_08467988.1| cysteine--tRNA ligase [Kingella kingae ATCC 23330]
gi|332968931|gb|EGK07978.1| cysteine--tRNA ligase [Kingella kingae ATCC 23330]
Length = 469
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 106/197 (53%), Gaps = 24/197 (12%)
Query: 287 LTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI 346
+T++ + EF+ E +K GVL P + +E IP + I+ L+ +AY
Sbjct: 83 ITIQELTEEFITAMN------EDSDKLGVLRPDVEPKATEHIPQMIQMIEDLIANGKAYP 136
Query: 347 GSDHSVYFDVDSFPHYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYES 399
++ VY+ V F Y +L G++ E + KR P DF LWK+AKP EP + S
Sbjct: 137 AANGDVYYAVREFAAYGQLSGKSLDDLRAGERVDVDTNKRDPLDFVLWKAAKPEEPHWNS 196
Query: 400 AWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS------- 452
WGKGRPGWHIECSAM FG D+H GG DL+FPHHENE AQSC HN S
Sbjct: 197 PWGKGRPGWHIECSAMGGELFGQTFDIHGGGADLQFPHHENEIAQSCGAHNSSCNHNHGD 256
Query: 453 ----QWVNYWLHTGHLR 465
V YWLH G +R
Sbjct: 257 KIIQSHVKYWLHNGFIR 273
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++IYN +T+ K F + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 2 LQIYNTLTRQKEKFEPLDPKNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGYPL 61
Query: 92 SIVISSVTDIDDKIINKANS 111
+ V ++TDIDDKII +AN
Sbjct: 62 TYV-RNITDIDDKIIKRANE 80
>gi|167855009|ref|ZP_02477783.1| cysteinyl-tRNA synthetase [Haemophilus parasuis 29755]
gi|167853857|gb|EDS25097.1| cysteinyl-tRNA synthetase [Haemophilus parasuis 29755]
Length = 459
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/171 (46%), Positives = 99/171 (57%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R +E + + +L P R ++ IP I + ++ LL AY+ D V F+V+SF
Sbjct: 91 RMIIEMHKDFDALNILRPDVEPRATQHIPEIIAIVEKLLAKGHAYVAEDGDVMFNVESFQ 150
Query: 361 HYFKLWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L +N Q +VKR+P DF LWK +K EP ++S WGKGRPGWHIECS
Sbjct: 151 KYGALSRQNLEQLQAGARVEIKSVKRNPMDFVLWKMSKENEPSWDSPWGKGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM S G D+H GG DL FPHHENE AQSC H +VNYWLHTG L
Sbjct: 211 AMNSKELGNHFDIHGGGSDLMFPHHENEIAQSCCAHG-DDYVNYWLHTGML 260
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN + + K F +H+ Y CG TVYD H GH V D+I R L Y +
Sbjct: 2 LKIYNTLKREKEEFKPIYPDHVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYL-RYLGYN 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TD+DDKII ++ E + R + +
Sbjct: 61 LRYVRNITDVDDKIIKRSLENNETCDQLVDRMIIEM 96
>gi|254360582|ref|ZP_04976731.1| cysteine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|452745743|ref|ZP_21945575.1| cysteinyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
gi|153091122|gb|EDN73127.1| cysteine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|452085882|gb|EME02273.1| cysteinyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
Length = 458
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 98/167 (58%), Gaps = 8/167 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R ++ IP I + ++ L+ AY+ +D V FDV+SF Y
Sbjct: 95 EMHKDFDALNILRPDVEPRATKHIPEIIAMVEKLIHNGHAYVAADGDVMFDVESFQKYGA 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q ++K++P DF LWK +K GEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSRQNLEQLQAGARVEIKSIKKNPMDFVLWKMSKAGEPSWESPWGNGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG DL FPHHENE AQSC H +VNYWLHTG L
Sbjct: 215 KELGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-GDYVNYWLHTGML 260
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN + + K F N N + Y CG TVYD H GH V D+I R L Y +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYL-RYSGYN 60
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 61 LRYVRNITDVDDKIIKRA 78
>gi|213513600|ref|NP_001133392.1| Cysteinyl-tRNA synthetase, cytoplasmic [Salmo salar]
gi|209153132|gb|ACI33145.1| Cysteinyl-tRNA synthetase, cytoplasmic [Salmo salar]
Length = 541
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 102/170 (60%), Gaps = 21/170 (12%)
Query: 315 VLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFKL---- 365
VLPP TRVSE+ P I F++ +LD Y S+ SVYFD F Y KL
Sbjct: 27 VLPPDVLTRVSEYCPEIVDFVKKILDNGFGY-ESNGSVYFDTAKFDTSQKHAYGKLVPEA 85
Query: 366 --------WGRNE---NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
G + + Q + KRS DFALWK++KPGEP ++S WGKGRPGWHIECSA
Sbjct: 86 VGDMKALQEGEGDLSVSADQLSEKRSQNDFALWKASKPGEPSWDSPWGKGRPGWHIECSA 145
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
MA G +D+H GG DL+FPHH+NE AQS A+ WV Y+LHTGHL
Sbjct: 146 MAGSILGESMDIHGGGFDLRFPHHDNELAQSEAYFENDHWVRYFLHTGHL 195
>gi|219848629|ref|YP_002463062.1| cysteinyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
gi|219542888|gb|ACL24626.1| cysteinyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
Length = 472
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 103/172 (59%), Gaps = 9/172 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y E+ ++ VLP T RVS +P I +F+Q L++ AY+ D VYF V
Sbjct: 92 QYAAEFLTQLQAMNVLPATAYPRVSTTMPGIIAFVQGLIERGYAYV-VDGDVYFRVKRDE 150
Query: 361 HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR+ + K SP DFALWK+A+PGEP ++S WG GRPGWHIECS
Sbjct: 151 DYGKLSGRSLDEMLSGTRFEVDPRKESPADFALWKAARPGEPAWDSPWGPGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
AMA + G Q+D+H GG DL FPHHENE AQS + Q + YW+H G L+
Sbjct: 211 AMAMEYLGPQIDIHGGGTDLIFPHHENEIAQSESLTGQP-FARYWVHNGMLQ 261
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILE-HYFHI 90
I +YN +T+ P ++ Y CG T YD HIGHA+ + D+IRR LE + +
Sbjct: 3 IHLYNTLTRRLEPLETIEPGVVRMYVCGVTPYDEAHIGHAMSAIVFDMIRRYLEFRGYQV 62
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVV 137
IV + TDIDDK+I +A ++ +D ++ +Y + ++ V+
Sbjct: 63 RHIV--NFTDIDDKVIARAQAMGQDPLALSGQYAAEFLTQLQAMNVL 107
>gi|159044247|ref|YP_001533041.1| cysteinyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
gi|187629812|sp|A8LLR2.1|SYC_DINSH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|157912007|gb|ABV93440.1| cysteinyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
Length = 458
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 97/167 (58%), Gaps = 8/167 (4%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
Y E M G LPPT R +E+IP + + I+TL+ AY+ H V FDV S+ Y L
Sbjct: 102 YLEDMAALGTLPPTHVPRATEYIPQMVAMIETLIARGHAYVAEGH-VLFDVRSYGAYGAL 160
Query: 366 WGRNEN-------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
GR+ + + KR P DF LWK ++ G P ++S WG+GRPGWHIECSAM+
Sbjct: 161 SGRSVDDMIAGARVEVAPYKRDPMDFVLWKPSEAGLPGWDSPWGRGRPGWHIECSAMSHE 220
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQSC H + + W+H L+
Sbjct: 221 LLGESFDIHGGGNDLQFPHHENEIAQSCCAHPEGGFAKVWMHNEMLQ 267
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 30 TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRIL-EHYF 88
T +K+ N T+ K F + ++++ Y CGPTVYD H+G+A V D++ R+L E Y
Sbjct: 4 TELKLTNTKTRRKEVFTPIDPDNVRMYVCGPTVYDRAHLGNARPAVVFDMLFRVLREVYG 63
Query: 89 HIHSIVISSVTDIDDKIINKA 109
H + ++TD+DDKI +A
Sbjct: 64 PEHVTYVRNITDVDDKINARA 84
>gi|408790757|ref|ZP_11202370.1| Cysteinyl-tRNA synthetase [Lactobacillus florum 2F]
gi|408519946|gb|EKK20059.1| Cysteinyl-tRNA synthetase [Lactobacillus florum 2F]
Length = 472
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 112/193 (58%), Gaps = 15/193 (7%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y ++ + V P T R +E IP I +FIQ+LLD AY+ D +VY+ FP
Sbjct: 92 KYIEAFYADTKALNVKPATNNPRATENIPEIITFIQSLLDKGYAYV-VDQNVYYRARRFP 150
Query: 361 HYFKL---------WGRNENITQHAV--KRSPFDFALWKSAKPGEPWYESAWGKGRPGWH 409
Y +L G ++++++ + K P DF LWK+AKPGE +E+ WG GRPGWH
Sbjct: 151 SYGQLSHQALADLETGASQHVSKTELNQKEDPIDFTLWKAAKPGEISWETPWGTGRPGWH 210
Query: 410 IECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR--GT 467
IECS MA+ + G +D+H GGIDL+FPHHENE AQS A Q Q+V YWLH G + T
Sbjct: 211 IECSVMATKYLGSTIDIHGGGIDLEFPHHENERAQSEAKTGQ-QFVKYWLHNGFVTVGAT 269
Query: 468 DGTRRLRAARFIT 480
D F+T
Sbjct: 270 DEKMSKSLGNFVT 282
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K++N + F +K Y CGPTVY+ HIG+A V D IRR LE Y
Sbjct: 3 LKVFNSLNNQLEVFEPLEAGKIKMYVCGPTVYNYIHIGNARSVVAFDTIRRYLE-YLGYQ 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+S+ TD+DDK+I A + + K +AK+Y
Sbjct: 62 VDFVSNFTDVDDKMIQAATADQTSVKQIAKKY 93
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
G+A V D IRR LE Y +S+ TD+DDK+I A + + K +AK+Y
Sbjct: 40 GNARSVVAFDTIRRYLE-YLGYQVDFVSNFTDVDDKMIQAATADQTSVKQIAKKY 93
>gi|229580812|ref|YP_002839211.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
gi|228011528|gb|ACP47289.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
Length = 470
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 98/147 (66%), Gaps = 10/147 (6%)
Query: 323 RVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL-------WGRNENITQH 375
RV+ I I +F+Q L+D AY+ SVYFDVD++P Y +L W + E +
Sbjct: 115 RVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEFVKE 174
Query: 376 AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKF 435
K+ +DFALWK+ KPGEP++ES WGKGRPGWHIECS M++ + G + D+H GG DL F
Sbjct: 175 --KKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGADLVF 232
Query: 436 PHHENEEAQSCAFHNQSQWVNYWLHTG 462
PHHENE AQ+ A + +WV+YW+H+
Sbjct: 233 PHHENERAQTEALTGE-KWVSYWVHSA 258
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 29 DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
D I++YN + + F N N +K Y CGPTVYD HIGH V D I R L
Sbjct: 2 DFRIRVYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRLKG 61
Query: 89 HIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVC 148
+ I + ++TDIDDKII K+ +D+ + Y+ +L Q
Sbjct: 62 YT-VIRVQNITDIDDKIIKKSQDTGKDWNEIVN-YYTKDYLDMLSQ-------------L 106
Query: 149 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS 186
VK+DI R+ H I + + K+I+K ++
Sbjct: 107 KVKIDIHPRVTHH--------IKEIINFVQKLIDKGHA 136
>gi|359298707|ref|ZP_09184546.1| cysteinyl-tRNA synthetase [Haemophilus [parainfluenzae] CCUG 13788]
gi|402304648|ref|ZP_10823714.1| cysteine--tRNA ligase [Haemophilus sputorum HK 2154]
gi|400377443|gb|EJP30320.1| cysteine--tRNA ligase [Haemophilus sputorum HK 2154]
Length = 459
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 98/167 (58%), Gaps = 8/167 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R ++ IP I + ++ L+ AY+ +D V FDV+SF Y
Sbjct: 95 EMHKDFDDLNILRPDVEPRATQHIPEIIAMVEKLIAKGHAYVAADGDVMFDVESFSQYGA 154
Query: 365 LWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N + +VK++P DF LWK +K EP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSRQNLAQLQAGARVEIKSVKKNPMDFVLWKMSKENEPSWESPWGNGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG DL FPHHENE AQSC H ++VNYWLHTG L
Sbjct: 215 QELGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-GEYVNYWLHTGML 260
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN + + K F N N + Y CG TVYD H GH V D+I R L Y +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIVRYL-RYLGYN 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TD+DDKII +A E + +R +
Sbjct: 61 LRYVRNITDVDDKIIKRALENNETCDALVERMIAEM 96
>gi|238618570|ref|YP_002913395.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
gi|238379639|gb|ACR40727.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
Length = 470
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 98/147 (66%), Gaps = 10/147 (6%)
Query: 323 RVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL-------WGRNENITQH 375
RV+ I I +F+Q L+D AY+ SVYFDVD++P Y +L W + E +
Sbjct: 115 RVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEFVKE 174
Query: 376 AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKF 435
K+ +DFALWK+ KPGEP++ES WGKGRPGWHIECS M++ + G + D+H GG DL F
Sbjct: 175 --KKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGADLVF 232
Query: 436 PHHENEEAQSCAFHNQSQWVNYWLHTG 462
PHHENE AQ+ A + +WV+YW+H+
Sbjct: 233 PHHENERAQTEALTGE-KWVSYWVHSA 258
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 29 DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
D I+IYN + + F N N +K Y CGPTVYD HIGH V D I R L
Sbjct: 2 DFRIRIYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRLKG 61
Query: 89 HIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVC 148
+ I + ++TDIDDKII K+ +D+ + Y+ +L Q
Sbjct: 62 YT-VIRVQNITDIDDKIIKKSRDTGKDWNEIVN-YYTKDYLDMLSQ-------------L 106
Query: 149 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS 186
VK+DI R+ H I + + K+I+K ++
Sbjct: 107 KVKIDIHPRVTHH--------IKEIINFVQKLIDKGHA 136
>gi|227826502|ref|YP_002828281.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
gi|229583664|ref|YP_002842165.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
gi|227458297|gb|ACP36983.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
gi|228018713|gb|ACP54120.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
Length = 470
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 98/147 (66%), Gaps = 10/147 (6%)
Query: 323 RVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL-------WGRNENITQH 375
RV+ I I +F+Q L+D AY+ SVYFDVD++P Y +L W + E +
Sbjct: 115 RVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEFVKE 174
Query: 376 AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKF 435
K+ +DFALWK+ KPGEP++ES WGKGRPGWHIECS M++ + G + D+H GG DL F
Sbjct: 175 --KKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGADLVF 232
Query: 436 PHHENEEAQSCAFHNQSQWVNYWLHTG 462
PHHENE AQ+ A + +WV+YW+H+
Sbjct: 233 PHHENERAQTEALTGE-KWVSYWVHSA 258
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 29 DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
D I+IYN + + F N N +K Y CGPTVYD HIGH V D I R L
Sbjct: 2 DFRIRIYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRLKG 61
Query: 89 HIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVC 148
+ I + ++TDIDDKII K+ +D+ + Y+ +L Q
Sbjct: 62 YT-VIRVQNITDIDDKIIKKSQDTGKDWNEIVN-YYTKDYLDMLSQ-------------L 106
Query: 149 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS 186
VK+DI R+ H I + + K+I+K ++
Sbjct: 107 KVKIDIHPRVTHH--------IKEIINFVQKLIDKGHA 136
>gi|385772112|ref|YP_005644678.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
gi|385774831|ref|YP_005647399.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus REY15A]
gi|323473579|gb|ADX84185.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus REY15A]
gi|323476226|gb|ADX81464.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
Length = 470
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 98/147 (66%), Gaps = 10/147 (6%)
Query: 323 RVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL-------WGRNENITQH 375
RV+ I I +F+Q L+D AY+ SVYFDVD++P Y +L W + E +
Sbjct: 115 RVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEFVKE 174
Query: 376 AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKF 435
K+ +DFALWK+ KPGEP++ES WGKGRPGWHIECS M++ + G + D+H GG DL F
Sbjct: 175 --KKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGADLVF 232
Query: 436 PHHENEEAQSCAFHNQSQWVNYWLHTG 462
PHHENE AQ+ A + +WV+YW+H+
Sbjct: 233 PHHENERAQTEALTGE-KWVSYWVHSA 258
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 29 DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
D I+IYN + + F N N +K Y CGPTVYD HIGH V D I R L
Sbjct: 2 DFRIRIYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRLKG 61
Query: 89 HIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVC 148
+ I + ++TDIDDKII K+ +D+ + Y+ +L Q
Sbjct: 62 YT-VIRVQNITDIDDKIIKKSQDTGKDWNEIVN-YYTKDYLDMLSQ-------------L 106
Query: 149 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS 186
VK+DI R+ H I + + K+I+K ++
Sbjct: 107 KVKIDIHPRVTHH--------IKEIINFVQKLIDKGHA 136
>gi|229577911|ref|YP_002836309.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
gi|284996496|ref|YP_003418263.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
gi|228008625|gb|ACP44387.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
gi|284444391|gb|ADB85893.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
Length = 470
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 98/147 (66%), Gaps = 10/147 (6%)
Query: 323 RVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL-------WGRNENITQH 375
RV+ I I +F+Q L+D AY+ SVYFDVD++P Y +L W + E +
Sbjct: 115 RVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEFVKE 174
Query: 376 AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKF 435
K+ +DFALWK+ KPGEP++ES WGKGRPGWHIECS M++ + G + D+H GG DL F
Sbjct: 175 --KKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGADLVF 232
Query: 436 PHHENEEAQSCAFHNQSQWVNYWLHTG 462
PHHENE AQ+ A + +WV+YW+H+
Sbjct: 233 PHHENERAQTEALTGE-KWVSYWVHSA 258
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 29 DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
D I+IYN + + F N N +K Y CGPTVYD HIGH V D I R L
Sbjct: 2 DFRIRIYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRLKG 61
Query: 89 HIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVC 148
+ I + ++TDIDDKII K+ +D+ + Y+ +L Q
Sbjct: 62 YT-VIRVQNITDIDDKIIKKSQDTGKDWNEIVN-YYTKDYLDMLSQ-------------L 106
Query: 149 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS 186
VK+DI R+ H I + + K+I+K ++
Sbjct: 107 KVKIDIHPRVTHH--------IKEIINFVQKLIDKGHA 136
>gi|325179782|emb|CCA14185.1| cysteinyltRNA synthetase putative [Albugo laibachii Nc14]
Length = 703
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 114/189 (60%), Gaps = 27/189 (14%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E + M G+ PT TRVSE++ I +Q +++ AY S+ SVYFD ++F
Sbjct: 160 WEASFLHDMASLGIKIPTVITRVSEYVDDIILLVQGIINNGFAY-ESNGSVYFDTNTFSQ 218
Query: 362 YF-KLWGR--NENITQ-------------------HAVKRSPFDFALWKSAKPGEPWYES 399
K +G+ ENI Q ++ KR DF LWK +K GEP++ S
Sbjct: 219 SSGKAYGKLLPENIGQSDLLAEGEGSLAANPTLLGNSDKRGASDFVLWKKSKNGEPFWVS 278
Query: 400 AWGKGRPGWHIECSAMAS----HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWV 455
WG GRPGWHIECSAMAS F GQ+D+H+GGIDL+FPHH+NE AQS A+ N SQW+
Sbjct: 279 PWGPGRPGWHIECSAMASSTLQRFADGQIDIHSGGIDLRFPHHDNEIAQSEAYFNFSQWI 338
Query: 456 NYWLHTGHL 464
NY+LHTGHL
Sbjct: 339 NYFLHTGHL 347
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 35/57 (61%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
+K+YN +T+TK FI + + WY CGPTVYD H+GH D RRILE YF
Sbjct: 35 LKLYNSLTRTKNHFIPIHGKRVLWYMCGPTVYDQTHLGHGRTYTCFDYARRILEDYF 91
>gi|374992959|ref|YP_004968458.1| cysteinyl-tRNA synthetase [Desulfosporosinus orientis DSM 765]
gi|357211325|gb|AET65943.1| cysteinyl-tRNA synthetase [Desulfosporosinus orientis DSM 765]
Length = 452
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/171 (46%), Positives = 103/171 (60%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y EYF+ + ++P T + +E IP + IQ L+DT AY D VYF V+ FP
Sbjct: 67 KYIEEYFKDAKALNLMPATVHPKATEHIPEMIEIIQGLIDTGLAY-EVDGDVYFAVERFP 125
Query: 361 HYFKLWGRN-ENITQHAV------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR E++ A K+ P DFALWK AKPGEP+++S WG+GRPGWHIECS
Sbjct: 126 DYGKLSGRTIEDMKAGARVEVDERKKHPMDFALWKKAKPGEPFWQSPWGEGRPGWHIECS 185
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM+ + G D+H GG DL FPHHENE AQ+ + + YW+H L
Sbjct: 186 AMSLKYLGAGFDIHGGGEDLSFPHHENEIAQTEGYLKGETFARYWMHNAFL 236
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKED 115
Y CGPT Y+ H G+A V D+IRR Y + + TD+DDKII + N D
Sbjct: 2 YVCGPTTYNYFHAGNARMFVVFDMIRRYF-IYKGYDVRYVQNFTDVDDKIIQRGNVEGMD 60
Query: 116 YKTVAKRYF---------LPLIFKILHQKVVGSIP 141
+ ++Y L L+ +H K IP
Sbjct: 61 PLALGQKYIEEYFKDAKALNLMPATVHPKATEHIP 95
>gi|219870367|ref|YP_002474742.1| cysteinyl-tRNA synthetase [Haemophilus parasuis SH0165]
gi|254781682|sp|B8F392.1|SYC_HAEPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|219690571|gb|ACL31794.1| cysteinyl-tRNA synthetase [Haemophilus parasuis SH0165]
Length = 459
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/171 (46%), Positives = 99/171 (57%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R +E + + +L P R ++ IP I + ++ LL AY+ D V F+V+SF
Sbjct: 91 RMIIEMHKDFDALNILRPDVEPRATQHIPEIIAIVEKLLAKGHAYVAEDGDVMFNVESFQ 150
Query: 361 HYFKLWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L +N Q +VKR+P DF LWK +K EP ++S WGKGRPGWHIECS
Sbjct: 151 KYGALSRQNLEQLQAGARVEIKSVKRNPMDFVLWKMSKENEPSWDSPWGKGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM S G D+H GG DL FPHHENE AQSC H +VNYWLHTG L
Sbjct: 211 AMNSKELGNHFDIHGGGSDLMFPHHENEIAQSCCAHG-DDYVNYWLHTGML 260
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN + + K F + +H+ Y CG TVYD H GH V D+I R L Y +
Sbjct: 2 LKIYNTLKREKEEFKPIHPDHVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYL-RYLGYN 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TD+DDKII ++ E + R + +
Sbjct: 61 LRYVRNITDVDDKIIKRSLENNETCDQLVDRMIIEM 96
>gi|145351377|ref|XP_001420057.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580290|gb|ABO98350.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 497
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 103/173 (59%), Gaps = 14/173 (8%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ E M G L PT R +E + I +FI+ L+ AY ++ VYF VD+ P Y L
Sbjct: 91 FHEDMAALGCLRPTLEPRATECVDDIIAFIERLIAKGNAY-ETEGDVYFSVDTLPAYGAL 149
Query: 366 WGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
GRN E + K++P DFALWK+AKPGEP + S WG+GRPGWHIECSAM
Sbjct: 150 SGRNQEDNRAGERVAVDGRKKNPADFALWKTAKPGEPTWTSPWGEGRPGWHIECSAMIEK 209
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQS-----CAFH-NQSQWVNYWLHTGHLR 465
G +D+H GG DL FPHHENE AQS C H +++ +V YW+H G ++
Sbjct: 210 MLGPTIDIHGGGQDLVFPHHENELAQSSAACGCGAHADENPFVRYWVHNGFVK 262
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 53 LKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSL 112
++ Y CG TVYD HIGHA V D++ R L + + TDIDDKII ++N
Sbjct: 18 VQMYVCGVTVYDYSHIGHARVYVAFDVLYRQLMRLGY-DVTYCRNFTDIDDKIIKRSNES 76
Query: 113 KEDYKTVAKRYF 124
E + + ++
Sbjct: 77 GETCEALTDKFI 88
>gi|15899047|ref|NP_343652.1| cysteinyl-tRNA synthetase [Sulfolobus solfataricus P2]
gi|284175285|ref|ZP_06389254.1| cysteinyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
gi|384432641|ref|YP_005641999.1| cysteinyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
gi|21264020|sp|Q97WE6.1|SYC_SULSO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|13815580|gb|AAK42442.1| Cysteinyl-tRNA synthetase (cysS) [Sulfolobus solfataricus P2]
gi|261600795|gb|ACX90398.1| cysteinyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
Length = 470
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 98/147 (66%), Gaps = 10/147 (6%)
Query: 323 RVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL-------WGRNENITQH 375
RV++ I I F+Q L+D AY+ SVYFDVD++P+Y +L W + E +
Sbjct: 115 RVTQHIREIIDFVQRLIDKGHAYVAPSGSVYFDVDTYPNYGELSNTKKEEWNQGEEFVKE 174
Query: 376 AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKF 435
K+ +DFALWK+ KPGEP++ES WGKGRPGWHIECS M++ + G + D+H GG DL F
Sbjct: 175 --KKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGADLIF 232
Query: 436 PHHENEEAQSCAFHNQSQWVNYWLHTG 462
PHHENE AQ+ A + +WV YW+H+
Sbjct: 233 PHHENERAQTEALIGE-KWVTYWVHSA 258
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 23/158 (14%)
Query: 29 DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
D I++YN + + F N +K Y CGPTVYD HIGH V D I R L
Sbjct: 2 DFRIRVYNSLGRKLEEFGTVEPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRLRG 61
Query: 89 HIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVC 148
+ I + ++TDIDDKII K+ + +D+ + YF +L Q
Sbjct: 62 YT-VIRVQNITDIDDKIIKKSQEIGKDWNEIVD-YFTKDYLDMLSQ-------------L 106
Query: 149 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS 186
VK+DI R+ +H I + D ++I+K ++
Sbjct: 107 KVKIDIHPRVTQH--------IREIIDFVQRLIDKGHA 136
>gi|315923786|ref|ZP_07920016.1| cysteine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
gi|315622906|gb|EFV02857.1| cysteine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
Length = 465
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 110/191 (57%), Gaps = 17/191 (8%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY-IGSDHSVYFDVDSF 359
+Y EYF+ + G+ T RVS+ +P I + ++ L D AY +G + VY+ VD F
Sbjct: 90 KYIAEYFKDADALGIRRATVHPRVSDTMPEIIAMVKALEDRGLAYNVGGN--VYYAVDRF 147
Query: 360 PHYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
P Y KL G+N I + K SP DFALWK AKPGEP+++S WG+GRPGWHIEC
Sbjct: 148 PDYGKLSGQNVADLEAGARIDVNDEKHSPLDFALWKKAKPGEPYWDSPWGRGRPGWHIEC 207
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQ---SCAFHNQSQWVNYWLHTGHLRGTDG 469
SAM+ F G +D+H GG DL FPHHENE AQ SC ++ YW+H G++ D
Sbjct: 208 SAMSRKFLGETIDIHGGGQDLIFPHHENEIAQSEGSCG----CEFARYWVHNGYININDE 263
Query: 470 TRRLRAARFIT 480
F T
Sbjct: 264 KMSKSKGNFFT 274
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T+ K F+ ++ Y+CGPTVY+ HIG+A + D++RR LE Y
Sbjct: 1 MKLYNTMTQRKEEFVPIEPGKVRMYSCGPTVYNYFHIGNARPFIVFDVLRRFLE-YIGYD 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKIIN+++ K +A +Y
Sbjct: 60 VTFVQNFTDVDDKIINRSHEEGCTAKEIADKY 91
>gi|15241557|ref|NP_198699.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|192807340|gb|ACF06122.1| At5g38830 [Arabidopsis thaliana]
gi|332006981|gb|AED94364.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 511
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 106/171 (61%), Gaps = 9/171 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ EY M LPPT RVSE + +I I+ +++ Y+ + V+F VD P
Sbjct: 97 RFCDEYLVDMGALQCLPPTHQPRVSEHMDNIIKMIEKIIEKDCGYV-VEGDVFFSVDKSP 155
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
+Y KL G+ E + + KR+P DFALWK+AKP EP +ES WG GRPGWHIECS
Sbjct: 156 NYGKLSGQLLEHTRAGERVAVDSRKRNPADFALWKAAKPDEPSWESPWGPGRPGWHIECS 215
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM+ H+ + D+H GG DLKFPHHENE AQ+CA S VNYWLH GH+
Sbjct: 216 AMSVHYLSPKFDIHGGGADLKFPHHENEIAQTCAACEDS-GVNYWLHNGHV 265
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T+ K I + Y CG T YD HIGHA V D++ R L+H
Sbjct: 8 LKLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYLKH-LDYD 66
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKII++AN ED ++ R+
Sbjct: 67 VTFVRNFTDVDDKIIDRANKNGEDPLDLSNRF 98
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V D++ R L+H + + TD+DDKII++AN ED ++ R+
Sbjct: 45 GHARAAVSFDVLYRYLKH-LDYDVTFVRNFTDVDDKIIDRANKNGEDPLDLSNRF 98
>gi|227829111|ref|YP_002830890.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
gi|227455558|gb|ACP34245.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
Length = 470
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 98/147 (66%), Gaps = 10/147 (6%)
Query: 323 RVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL-------WGRNENITQH 375
RV+ I I +F+Q L+D AY+ SVYFDVD++P Y +L W + E +
Sbjct: 115 RVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEFVKE 174
Query: 376 AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKF 435
K+ +DFALWK+ KPGEP++ES WGKGRPGWHIECS M++ + G + D+H GG DL F
Sbjct: 175 --KKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGADLVF 232
Query: 436 PHHENEEAQSCAFHNQSQWVNYWLHTG 462
PHHENE AQ+ A + +WV+YW+H+
Sbjct: 233 PHHENERAQTEALTGE-KWVSYWVHSA 258
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 29 DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
D I+IYN + + F N N +K Y CGPTVYD HIGH V D I R L
Sbjct: 2 DFRIRIYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRLKG 61
Query: 89 HIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVC 148
+ I + ++TDIDDKII K+ +D+ + Y+ +L Q
Sbjct: 62 YT-VIRVQNITDIDDKIIKKSQDTGKDWNEIVN-YYTKDYLDMLSQ-------------L 106
Query: 149 NVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANS 186
VK+DI R+ H I + + K+I+K ++
Sbjct: 107 KVKIDIHPRVTHH--------IKEIINFVQKLIDKGHA 136
>gi|170727456|ref|YP_001761482.1| cysteinyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
gi|229558789|sp|B1KLU0.1|SYC_SHEWM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169812803|gb|ACA87387.1| cysteinyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
Length = 459
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R + + I ++ L++ + AY+ S+ V F V SFP Y +
Sbjct: 95 EMHKDFDSLNMKRPDFEPRATLHMAEIIEMVEKLIEKEHAYVSSNGDVLFSVSSFPEYGR 154
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L G+N Q KR P DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSGQNLEQLQAGARVEVEDSKRDPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC HN + +VNYW+HTG
Sbjct: 215 KHLGQHFDIHGGGSDLQFPHHENEIAQSCCAHN-TPYVNYWMHTG 258
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T+ K F + Y CG T+YD HIGH V D+I R L Y
Sbjct: 2 LKLYNSLTRQKEEFKPLQPGKVGMYVCGITIYDLCHIGHGRTFVAFDMIVRYL-RYSGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TD+DDKII +A KE ++ +R
Sbjct: 61 VNFLRNITDVDDKIIKRAAENKESCDSLTER 91
>gi|397666931|ref|YP_006508468.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
gi|395130342|emb|CCD08580.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
Length = 456
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 104/172 (60%), Gaps = 12/172 (6%)
Query: 305 EYFESMEK----FGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y ++M +LPP R + I I IQ LL+ AY+ + V ++VD+FP
Sbjct: 91 QYIDAMNNDTHALNILPPDHEPRATGHIETIIRLIQRLLEKGNAYVSENGDVCYEVDTFP 150
Query: 361 HYFKLWGRN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ E + + KRSP DF LWK AKPGEP + S WG+GRPGWHIECS
Sbjct: 151 EYGKLSHKDIEGLVSGSRVEIVKEKRSPLDFVLWKKAKPGEPSWHSPWGEGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
AMA H G Q D+H GG+DL+FPHHENE AQS A + + NYWLH G L+
Sbjct: 211 AMAMHELGEQFDIHGGGLDLQFPHHENEIAQSEAATGKP-FANYWLHVGMLQ 261
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILE-HYFHI 90
+ +YN +T+ K PFI + Y CG TVYD H+GHA V D++ R L F +
Sbjct: 2 LHLYNSLTRKKEPFISLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 91 HSIVISSVTDIDDKIINKANS 111
+ ++TDIDDKII +A+
Sbjct: 62 --TYVRNITDIDDKIIARASE 80
>gi|334346836|ref|XP_003341857.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial-like
[Monodelphis domestica]
Length = 787
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 104/168 (61%), Gaps = 5/168 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS-FP 360
YE ++ M +LPPT RV++ IPHI SFI+ ++ AY +VYFD+ S
Sbjct: 352 YEEDFKLDMAALKILPPTVYMRVTDNIPHIISFIEGIIAKGHAYSTMKGNVYFDLKSRGG 411
Query: 361 HYFKLWG----RNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
Y KL G + KR DFALWK+AKP E ++ S WG GRPGWHIECS ++
Sbjct: 412 KYGKLIGIVPEPGVEPANDSDKRHASDFALWKAAKPQEIFWASPWGNGRPGWHIECSTIS 471
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
S FG Q+D+HTGGIDL FPHHENE AQ +H QW NY+LH+GHL
Sbjct: 472 SLVFGSQLDIHTGGIDLAFPHHENEIAQCEVYHQCKQWGNYFLHSGHL 519
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 85/153 (55%), Gaps = 19/153 (12%)
Query: 21 KWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDII 80
+W LP G+DTGIKIYN +T+ K P I+ WY+CGPTVYD H+GHA V+ DII
Sbjct: 250 EWCLPPGHDTGIKIYNSLTQRKDPLILPRPEATSWYSCGPTVYDHAHLGHACSYVRFDII 309
Query: 81 RRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY---------FLPLIFKI 131
RRIL F + +++ +TD+DDKII +AN + +A+ Y L ++
Sbjct: 310 RRILTKVFGYNIVMVMGITDVDDKIIKRANEMDVAPSALARLYEEDFKLDMAALKILPPT 369
Query: 132 LHQKVVGSIP----------TRGHAVCNVKLDI 154
++ +V +IP +GHA +K ++
Sbjct: 370 VYMRVTDNIPHIISFIEGIIAKGHAYSTMKGNV 402
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ DIIRRIL F + +++ +TD+DDKII +AN + +A+ Y
Sbjct: 298 GHACSYVRFDIIRRILTKVFGYNIVMVMGITDVDDKIIKRANEMDVAPSALARLY 352
>gi|365921978|ref|ZP_09446221.1| cysteine--tRNA ligase [Cardiobacterium valvarum F0432]
gi|364575078|gb|EHM52496.1| cysteine--tRNA ligase [Cardiobacterium valvarum F0432]
Length = 451
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 100/175 (57%), Gaps = 8/175 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E G LPP R ++ +P + + I+TL+ AY + VY+ V SFP
Sbjct: 93 RFTAAMHEDEAALGCLPPDEEPRATDAVPGMIALIETLIKKGHAYAADNGDVYYAVRSFP 152
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL R+ E I + K P DF LWK+AKPGEP ++S WG+GRPGWHIECS
Sbjct: 153 GYGKLANRSLDDLRAGERIAVNEAKNDPLDFVLWKAAKPGEPSWDSPWGQGRPGWHIECS 212
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTD 468
M++ G D+H GG+DLKFPHHE E AQS Q VNYWLH G ++ D
Sbjct: 213 VMSAAALGEHFDIHGGGMDLKFPHHECEIAQSEGACGH-QHVNYWLHNGFVQIND 266
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 30 TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHY-F 88
+ ++ YN +++ K PF + Y CG TVYD HIGHA V D I R L +
Sbjct: 2 SALQFYNSLSRQKEPFHPLHAGRTGMYVCGMTVYDYCHIGHARVMVVFDTIARHLRALGY 61
Query: 89 HIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+H + ++TDIDDKII +A E + +R+
Sbjct: 62 ELH--YVRNITDIDDKIIVRAAENGEPIAALTERF 94
>gi|303290903|ref|XP_003064738.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453764|gb|EEH51072.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 479
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 102/183 (55%), Gaps = 18/183 (9%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ + E M G LPPT R + + I + L++ AY VYF VDS P
Sbjct: 86 RFIAAFHEDMSSLGCLPPTMEPRATRHVDDILRVTEALVEKGHAYPAEGGDVYFSVDSLP 145
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR E + K++P DFALWK++KPGEP + S WG+GRPGWHIECS
Sbjct: 146 TYGKLSGRKLEDNRAGERVAIDERKKNPADFALWKASKPGEPSWASPWGEGRPGWHIECS 205
Query: 414 AMASHFFGGQ-VDLHTGGIDLKFPHHENEEAQSCAF----------HNQSQWVNYWLHTG 462
AM FGG+ +D+H GG DL FPHHENE AQS AF + +V YW+H G
Sbjct: 206 AMIDATFGGKSIDIHGGGQDLVFPHHENELAQSTAFCGCCDDAKDAKDAPPFVKYWVHNG 265
Query: 463 HLR 465
++
Sbjct: 266 FVK 268
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Query: 38 ITKTKVPFIIQNKNHLK--WYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVI 95
+T+ K PF + + K Y CG TVYD HIGHA V D++ R L + +
Sbjct: 1 MTRKKEPFAPNDPDDKKVSMYVCGVTVYDYSHIGHARVYVAFDVLYRTLTRLGY-DVTYV 59
Query: 96 SSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKV--VGSIPTRGHAVCNVKLD 153
+ TD+DDKII +AN E+ + +R+ H+ + +G +P +D
Sbjct: 60 RNFTDVDDKIIKRANENGEECDALVERF-----IAAFHEDMSSLGCLPPTMEPRATRHVD 114
Query: 154 IIRRILE 160
I R+ E
Sbjct: 115 DILRVTE 121
>gi|153871051|ref|ZP_02000318.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
gi|152072482|gb|EDN69681.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
Length = 463
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 106/175 (60%), Gaps = 8/175 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ +E + V+ P R ++ IP I + IQ+LLD AY+ + V + + F
Sbjct: 91 RFIQAMYEDTDALNVIRPDIEPRATQSIPEIVAMIQSLLDKNYAYLTDNGDVCYAIQRFE 150
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
+Y +L G++ E + + K+ P DF LWK+AKPGEP +ES WG GRPGWHIECS
Sbjct: 151 NYGQLSGKHLDDLRAGERVEVNESKQHPLDFVLWKTAKPGEPSWESPWGAGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTD 468
AM++H G D+H GG+DL+FPHHENE AQS ++ +VN W+H G +R D
Sbjct: 211 AMSTHCLGNHFDIHGGGMDLQFPHHENEIAQSEGATGET-FVNVWMHNGFVRIND 264
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ I+N +TK K PF ++ Y CG TVYD H+GHA + D++ R L +
Sbjct: 2 LTIHNSLTKQKDPFTPIEPGKVRLYVCGMTVYDYCHVGHARVMIVFDVVVRYLRSLGY-E 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TDIDDKII +AN ED + R+ +
Sbjct: 61 VTYVRNITDIDDKIIQRANENGEDINQLTDRFIQAM 96
>gi|253681484|ref|ZP_04862281.1| cysteine--tRNA ligase [Clostridium botulinum D str. 1873]
gi|253561196|gb|EES90648.1| cysteine--tRNA ligase [Clostridium botulinum D str. 1873]
Length = 466
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/171 (46%), Positives = 100/171 (58%), Gaps = 9/171 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ EY++ + + T R +EF+ I SF++ L+D AY D VYF F
Sbjct: 90 RFINEYYKDADGLNIKRATVNPRATEFMDEIISFVKDLIDKGYAY-EVDGDVYFSTKKFA 148
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL G+N IT K+ P DFA+WK+ KPGEP +ES WGKGRPGWHIECS
Sbjct: 149 EYGKLSGQNLDDLQAGARITVDERKQDPMDFAIWKNEKPGEPSWESPWGKGRPGWHIECS 208
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
MA G +D+H GG DL FPHHENE AQS A N + NYW+H+ +L
Sbjct: 209 CMAHKLLGDTIDIHAGGADLVFPHHENEIAQSEA-RNGKDFANYWMHSAYL 258
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K++N +T+ K F + Y CGPTVY+ HIG+ + D IRR E Y
Sbjct: 1 MKLFNTMTRQKEEFKPIKDGEVSMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFE-YKGYK 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I + TDIDDK+I KAN K + R+
Sbjct: 60 VNFIQNFTDIDDKMIKKANEENVTVKELGDRF 91
>gi|397663742|ref|YP_006505280.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
gi|395127153|emb|CCD05341.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila]
Length = 456
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 104/172 (60%), Gaps = 12/172 (6%)
Query: 305 EYFESMEK----FGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y ++M +LPP R + I I IQ LL+ AY+ + V ++VD+FP
Sbjct: 91 QYIDAMNNDTHALNILPPDHEPRATGHIETIIRLIQRLLEKDSAYVSENGDVCYEVDTFP 150
Query: 361 HYFKLWGRN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ E + + KRSP DF LWK AKPGEP + S WG+GRPGWHIECS
Sbjct: 151 EYGKLSHKDIEGLVSGSRVEIVKEKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
AMA H G Q D+H GG+DL+FPHHENE AQS A + + NYWLH G L+
Sbjct: 211 AMAMHELGEQFDIHGGGLDLQFPHHENEIAQSEAATGKP-FANYWLHVGMLQ 261
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILE-HYFHI 90
+ +YN +T+ K PF+ + Y CG TVYD H+GHA V D++ R L F +
Sbjct: 2 LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 91 HSIVISSVTDIDDKIINKANS 111
+ ++TDIDDKII +A+
Sbjct: 62 --TYVRNITDIDDKIIARASE 80
>gi|54294205|ref|YP_126620.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Lens]
gi|61216142|sp|Q5WX29.1|SYC_LEGPL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|53754037|emb|CAH15510.1| cysteine tRNA synthetase [Legionella pneumophila str. Lens]
gi|307610020|emb|CBW99553.1| cysteine tRNA synthetase [Legionella pneumophila 130b]
Length = 456
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 104/172 (60%), Gaps = 12/172 (6%)
Query: 305 EYFESMEK----FGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y ++M +LPP R + I I IQ LL+ AY+ + V ++VD+FP
Sbjct: 91 QYIDAMNNDTHALNILPPDHEPRATGHIETIIRLIQRLLEKGNAYVSENGDVCYEVDTFP 150
Query: 361 HYFKLWGRN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ E + + KRSP DF LWK AKPGEP + S WG+GRPGWHIECS
Sbjct: 151 EYGKLSHKDIEGLVSGSRVEIVKEKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
AMA H G Q D+H GG+DL+FPHHENE AQS A + + NYWLH G L+
Sbjct: 211 AMAMHELGEQFDIHGGGLDLQFPHHENEIAQSEAATGKP-FANYWLHVGMLQ 261
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILE-HYFHI 90
+ +YN +T+ K PF+ + Y CG TVYD H+GHA V D++ R L F +
Sbjct: 2 LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 91 HSIVISSVTDIDDKIINKANS 111
+ ++TDIDDKII +A+
Sbjct: 62 --TYVRNITDIDDKIIARASE 80
>gi|392423874|ref|YP_006464868.1| cysteinyl-tRNA synthetase [Desulfosporosinus acidiphilus SJ4]
gi|391353837|gb|AFM39536.1| cysteinyl-tRNA synthetase [Desulfosporosinus acidiphilus SJ4]
Length = 477
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 103/171 (60%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y EYF+ + +LP T + +E IP + IQ L++T AY D VYF VD FP
Sbjct: 92 KYIDEYFKDAKALNILPATVHPKATEHIPEMIEIIQGLIETGLAY-DVDGDVYFAVDHFP 150
Query: 361 HYFKLWGRN-ENITQHAV------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
+Y KL GR E++ A K P DFALWK AKPGEP +ES WG GRPGWHIEC+
Sbjct: 151 NYGKLSGRTLEDMKAGARIEVDERKHHPMDFALWKKAKPGEPSWESPWGLGRPGWHIECT 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM+ + G D+H GG DL FPHHENE AQ+ + N + +YW+H L
Sbjct: 211 AMSLKYLGAGFDIHGGGGDLVFPHHENEIAQTEGYLNGQTFAHYWMHNAFL 261
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++++N +T+ K F + + Y CGPT Y+ H G+A V D+IRR Y
Sbjct: 3 LRLFNTMTRQKEEFKSRESGKVAMYVCGPTTYNFFHAGNARMFVVFDMIRRYF-MYKGYD 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYF---------LPLIFKILHQKVVGSIP 141
+ + TD+DDKII + + D +A++Y L ++ +H K IP
Sbjct: 62 VRYVQNFTDVDDKIIQRGHVEGMDPLALAQKYIDEYFKDAKALNILPATVHPKATEHIP 120
>gi|52841538|ref|YP_095337.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378777173|ref|YP_005185610.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|61216153|sp|Q5ZVY1.1|SYC_LEGPH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|52628649|gb|AAU27390.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364507987|gb|AEW51511.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 456
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 104/172 (60%), Gaps = 12/172 (6%)
Query: 305 EYFESMEK----FGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y ++M +LPP R + I I IQ LL+ AY+ + V ++VD+FP
Sbjct: 91 QYIDAMNNDTHALNILPPDHEPRATGHIETIIRLIQRLLEKGNAYVSENGDVCYEVDTFP 150
Query: 361 HYFKLWGRN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ E + + KRSP DF LWK AKPGEP + S WG+GRPGWHIECS
Sbjct: 151 EYGKLSHKDIEGLVSGSRVEIVKEKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
AMA H G Q D+H GG+DL+FPHHENE AQS A + + NYWLH G L+
Sbjct: 211 AMAMHELGEQFDIHGGGLDLQFPHHENEIAQSEAATGKP-FANYWLHVGMLQ 261
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILE-HYFHI 90
+ +YN +T+ K PF+ + Y CG TVYD H+GHA V D++ R L F +
Sbjct: 2 LHLYNSLTRKKEPFVSLKPGTIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 91 HSIVISSVTDIDDKIINKANS 111
+ ++TDIDDKII +A+
Sbjct: 62 --TYVRNITDIDDKIIARASE 80
>gi|147901608|ref|NP_001083370.1| probable cysteine--tRNA ligase, mitochondrial [Xenopus laevis]
gi|82237606|sp|Q6PA41.1|SYCM_XENLA RecName: Full=Probable cysteine--tRNA ligase, mitochondrial;
AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS;
Flags: Precursor
gi|38014676|gb|AAH60463.1| MGC68641 protein [Xenopus laevis]
Length = 572
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 111/167 (66%), Gaps = 4/167 (2%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE ++ + M VLPPT RV+E IP I SFIQ ++ AY S +VYFDV S
Sbjct: 146 YEQDFKQDMTALRVLPPTVYMRVTESIPQIISFIQQIIANGHAYSTSQGNVYFDVQSIGD 205
Query: 362 YFKLWGRN--ENITQHAV--KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
+ + + + ++ A+ KR DFALWK++KP EP++ S WGKGRPGWHIECS +AS
Sbjct: 206 QYGKFNDSFCDAASESALQDKRHIRDFALWKTSKPEEPYWASPWGKGRPGWHIECSTIAS 265
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
FG +D+HTGGIDL FPHHENE AQ A+H +QW NY+LHTGHL
Sbjct: 266 SVFGKHLDIHTGGIDLAFPHHENEIAQCEAYHQSTQWGNYFLHTGHL 312
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 8 SLALSYATSCESPK--WSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDS 65
+L S +C +P W+ PSG DTGIK+YN +T+ K P I+ + WY+CGPTVYD
Sbjct: 29 TLMFSSGNACAAPVGCWAPPSGQDTGIKVYNSLTRKKEPLILADPTVATWYSCGPTVYDH 88
Query: 66 PHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
H+GHA V+ D IRRIL F I ++ VTDIDDKII +A L +A+ Y
Sbjct: 89 AHLGHACSYVRFDTIRRILLKVFGIDIVMAMVVTDIDDKIIKRAKELNISPVALARTY 146
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 31/55 (56%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V+ D IRRIL F I ++ VTDIDDKII +A L +A+ Y
Sbjct: 92 GHACSYVRFDTIRRILLKVFGIDIVMAMVVTDIDDKIIKRAKELNISPVALARTY 146
>gi|54297226|ref|YP_123595.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Paris]
gi|61216143|sp|Q5X5P9.1|SYC_LEGPA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|53751011|emb|CAH12422.1| cysteine tRNA synthetase [Legionella pneumophila str. Paris]
Length = 456
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 104/172 (60%), Gaps = 12/172 (6%)
Query: 305 EYFESMEK----FGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y ++M +LPP R + I I IQ LL+ AY+ + V ++VD+FP
Sbjct: 91 QYIDAMNNDTHALNILPPDHEPRATGHIETIIRLIQRLLEKGNAYVSDNGDVCYEVDTFP 150
Query: 361 HYFKLWGRN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ E + + KRSP DF LWK AKPGEP + S WG+GRPGWHIECS
Sbjct: 151 EYGKLSHKDIEGLVSGSRVEIVKEKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
AMA H G Q D+H GG+DL+FPHHENE AQS A + + NYWLH G L+
Sbjct: 211 AMAMHELGEQFDIHGGGLDLQFPHHENEIAQSEAATGKP-FANYWLHVGMLQ 261
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILE-HYFHI 90
+ +YN +T+ K PF+ + Y CG TVYD H+GHA V D++ R L F +
Sbjct: 2 LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 91 HSIVISSVTDIDDKIINKANS 111
+ ++TDIDDKII +A+
Sbjct: 62 --TYVRNITDIDDKIIARASE 80
>gi|350561458|ref|ZP_08930296.1| cysteinyl-tRNA synthetase [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349780490|gb|EGZ34808.1| cysteinyl-tRNA synthetase [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 469
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 101/171 (59%), Gaps = 9/171 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY + E + + G LPP+ R +E IP + S I+ L+ AY+ +DH + V S+P
Sbjct: 96 RYTQAFHEDVARLGALPPSLEPRATEHIPQMISLIERLIARGHAYL-ADHHALYAVHSYP 154
Query: 361 HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L GR+ + + KR P DF LWK +KPGEP +ES WG GRPGWH+ECS
Sbjct: 155 EYGRLSGRSLDDMRAGARVEVAEYKRDPADFVLWKPSKPGEPAWESPWGPGRPGWHLECS 214
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM G +D+H GG DL FPHHENE AQ C H ++ +W+H GH+
Sbjct: 215 AMIETHLGETIDIHGGGHDLVFPHHENEIAQGCGAHG-VEYARFWVHNGHV 264
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEH-YFHI 90
++++N + PF+ + + Y CGPTVY+ HIG+ V D++ R+L Y
Sbjct: 5 LRLHNTLGGKLEPFVPDDPERVTMYVCGPTVYNFVHIGNGRPVVVFDVLFRVLRALYGAD 64
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKV--VGSIP 141
H ++TD+DDKI A ED +A RY + H+ V +G++P
Sbjct: 65 HVFYARNITDVDDKINQAAAENHEDIGVLAARY-----TQAFHEDVARLGALP 112
>gi|386826602|ref|ZP_10113709.1| cysteinyl-tRNA synthetase [Beggiatoa alba B18LD]
gi|386427486|gb|EIJ41314.1| cysteinyl-tRNA synthetase [Beggiatoa alba B18LD]
Length = 464
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 100/172 (58%), Gaps = 8/172 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ +E + GVL P + R +++I HI I L+ AY ++ VY+ V F
Sbjct: 91 RFIQAMYEDADALGVLRPDQEPRATQYIDHIIDLITRLMKRGYAYTANNGDVYYAVGKFA 150
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL G+ E + K+ P DF LWK+AKP EP + S WG GRPGWHIECS
Sbjct: 151 EYGKLSGKRIEDLRAGERVDIEEAKQDPLDFVLWKAAKPNEPSWASPWGNGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
AM++H G D+H GG+DL+FPHHENE AQS + Q+VN W+H G +R
Sbjct: 211 AMSTHCLGNHFDIHGGGMDLQFPHHENEIAQSEGATGE-QFVNVWMHNGFVR 261
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ IYN +TK K PF N ++ Y CG TVYD H+GHA V D++ R L +
Sbjct: 2 LTIYNTLTKDKAPFKPIEANKVRMYVCGMTVYDYCHVGHARVMVVFDMVARWLRASGY-D 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
I ++TDIDDKIIN+AN ED ++ +R+ +
Sbjct: 61 VTYIRNITDIDDKIINRANENGEDIYSLTERFIQAM 96
>gi|19173375|ref|NP_597178.1| CYSTEINYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
gi|74697526|sp|Q8SRE0.1|SYC_ENCCU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|19170964|emb|CAD26354.1| CYSTEINYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
Length = 480
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 101/170 (59%), Gaps = 7/170 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF- 359
+Y E+FE M+ V P+ T V+ ++ I FI+ L AY S SVYFD++S+
Sbjct: 95 KYTEEFFEDMKTLNVRSPSFVTFVTSYVDKIVKFIEKLEANGLAY-ESRGSVYFDLNSYQ 153
Query: 360 -----PHYFKLWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
P + G N ++ KRSP DF LWK +K EP YES WG GRPGWHIECS
Sbjct: 154 QRYSYPLFKSKDGINSEGDENKDKRSPCDFVLWKRSKENEPRYESKWGHGRPGWHIECSV 213
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
M+S G +D+H GG+DL FPHHENE AQ A+ Q WV +LHTGHL
Sbjct: 214 MSSDILGEDLDIHAGGVDLAFPHHENEIAQCQAYFMQEPWVKCFLHTGHL 263
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%)
Query: 29 DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
D +K+YN IT+T F + N +K Y CGPTVYDS HIGHA V D+IRR+L Y
Sbjct: 2 DKTLKLYNSITRTIDIFTPRKGNEVKMYICGPTVYDSSHIGHARTYVMFDVIRRVLSDYL 61
Query: 89 HIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + ++TDIDDKII +AN + V ++Y
Sbjct: 62 KYNVRFVMNITDIDDKIIARANETGASMEEVTRKY 96
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V D+IRR+L Y + + ++TDIDDKII +AN + V ++Y
Sbjct: 42 GHARTYVMFDVIRRVLSDYLKYNVRFVMNITDIDDKIIARANETGASMEEVTRKY 96
>gi|425063642|ref|ZP_18466767.1| Cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
X73]
gi|404382196|gb|EJZ78657.1| Cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
X73]
Length = 459
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 100/167 (59%), Gaps = 8/167 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + VL P R + IP I + I+ L+ + AY+ ++ V FDV+SF Y K
Sbjct: 95 EMHKDFDALNVLRPDVEPRATHHIPEIIAMIEKLIARQHAYVSANGDVMFDVESFKEYGK 154
Query: 365 LWGRNENITQHA-------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q VK++P DF LWK +KPGEP + S WGKGRPGWHIECSAM
Sbjct: 155 LSRQNLEQLQAGARVEIVNVKKNPMDFVLWKMSKPGEPSWPSPWGKGRPGWHIECSAMNH 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG DL FPHHENE AQSC H+ ++VNYW+H+G +
Sbjct: 215 KELGEHFDIHGGGSDLTFPHHENEIAQSCCAHS-GRYVNYWIHSGMI 260
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KI+N +T+ K F + N + Y CG TVYD H+GH V D+I R L Y
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 61 LTYVRNITDVDDKIIKRA 78
>gi|163847402|ref|YP_001635446.1| cysteinyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
gi|222525251|ref|YP_002569722.1| cysteinyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
gi|163668691|gb|ABY35057.1| cysteinyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
gi|222449130|gb|ACM53396.1| cysteinyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
Length = 472
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 113/198 (57%), Gaps = 20/198 (10%)
Query: 277 ILIQVSLLG--PLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSF 334
++ + + LG PLTL + +Y E+ ++ VLP T RVS +P I +F
Sbjct: 75 VIARANALGQDPLTL---------SGQYAAEFLAQLQAMNVLPATAYPRVSTTMPAIIAF 125
Query: 335 IQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENITQHAV-------KRSPFDFALW 387
+Q L++ AY+ D VYF V Y KL GR+ + K SP DFALW
Sbjct: 126 VQGLIERGYAYV-VDGDVYFRVRRDEDYGKLSGRSLDEMLSGTRFEVDPRKESPADFALW 184
Query: 388 KSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCA 447
K+A+PGEP +ES WG GRPGWHIECSAMA G Q+D+H GG DL FPHHENE AQS +
Sbjct: 185 KAARPGEPSWESPWGPGRPGWHIECSAMAMEHLGPQIDIHGGGTDLIFPHHENEIAQSES 244
Query: 448 FHNQSQWVNYWLHTGHLR 465
Q + YW+H G L+
Sbjct: 245 LTGQC-FARYWVHNGMLQ 261
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILE-HYFHI 90
I++YN +++ P ++ Y CG T YD HIGHA+ + D+IRR LE + +
Sbjct: 3 IQLYNTLSRRLEPLETIEPGVVRMYVCGVTPYDEAHIGHAMSAIVFDVIRRYLEFRGYEV 62
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVV 137
IV + TDIDDK+I +AN+L +D T++ +Y + ++ V+
Sbjct: 63 RHIV--NFTDIDDKVIARANALGQDPLTLSGQYAAEFLAQLQAMNVL 107
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 144 GHAVCNVKLDIIRRILE-HYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRL 202
GHA+ + D+IRR LE + + IV + TDIDDK+I +AN+L +D T++ +Y
Sbjct: 40 GHAMSAIVFDVIRRYLEFRGYEVRHIV--NFTDIDDKVIARANALGQDPLTLSGQYAAEF 97
Query: 203 IFKILHQKVV 212
+ ++ V+
Sbjct: 98 LAQLQAMNVL 107
>gi|396081849|gb|AFN83463.1| cysteinyl-tRNA synthetase [Encephalitozoon romaleae SJ-2008]
Length = 482
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 111/188 (59%), Gaps = 8/188 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF- 359
+Y E+FE ME V P+ T V+ ++ I FI+ L AY S SVYFD++ +
Sbjct: 97 KYTEEFFEDMEALNVRQPSFVTFVTSYVDKIVKFIEKLETNGFAY-ESGGSVYFDLEKYQ 155
Query: 360 -PHYFKLW----GRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
H + L+ G N ++ KR +DF LWK +K EP Y+S WG GRPGWHIECS
Sbjct: 156 EKHNYPLFKSKDGINSEGAENKDKRGSWDFVLWKKSKENEPRYKSKWGYGRPGWHIECSV 215
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLR 474
M+S GG +D+H GGIDL FPHHENE AQ A+ + WV ++LHTGHL DG + +
Sbjct: 216 MSSDILGGDLDIHAGGIDLAFPHHENEIAQCQAYFMKEPWVRWFLHTGHL-NIDGLKMSK 274
Query: 475 AARFITNL 482
+ + T +
Sbjct: 275 SLKNFTTI 282
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 60/95 (63%)
Query: 29 DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
D +K+YN ITKTK F+ N +K Y CGPTVYDSPHIGHA V D++RR+L Y
Sbjct: 4 DRSLKLYNSITKTKETFVPSRGNEVKMYICGPTVYDSPHIGHARTYVMFDVMRRVLSDYL 63
Query: 89 HIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ ++TDIDDKII++AN + + ++Y
Sbjct: 64 KYDVRFVMNITDIDDKIISRANVSGASTEEITRKY 98
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 141 PTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
P GHA V D++RR+L Y + ++TDIDDKII++AN + + ++Y
Sbjct: 41 PHIGHARTYVMFDVMRRVLSDYLKYDVRFVMNITDIDDKIISRANVSGASTEEITRKY 98
>gi|297801734|ref|XP_002868751.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314587|gb|EFH45010.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 106/171 (61%), Gaps = 9/171 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ EY M L PT RVSE + HI I+ +++ Y+ + V+F VD P
Sbjct: 97 RFCEEYLVDMGALQCLLPTHQPRVSEHMDHIIKMIEKIIEKDCGYV-VEGDVFFSVDKSP 155
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
+Y KL G+ E + + KR+P DFALWK+AKP EP +ES WG GRPGWHIECS
Sbjct: 156 NYGKLSGQLLEHTRAGERVAVDSRKRNPADFALWKAAKPEEPSWESPWGPGRPGWHIECS 215
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM++H+ + D+H GG DLKFPHHENE AQ+CA S VNYWLH GH+
Sbjct: 216 AMSAHYLSPKFDIHGGGADLKFPHHENEIAQTCAACEDS-GVNYWLHNGHV 265
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T+ K I + Y CG T YD HIGHA V D++ R L+H +
Sbjct: 8 LKLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYLKHLGYEV 67
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ V + TD+DDKII +AN ED ++ R+
Sbjct: 68 NFV-RNFTDVDDKIIIRANENGEDPLDLSNRF 98
>gi|383788765|ref|YP_005473334.1| cysteinyl-tRNA synthetase [Caldisericum exile AZM16c01]
gi|381364402|dbj|BAL81231.1| cysteinyl-tRNA synthetase [Caldisericum exile AZM16c01]
Length = 498
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 97/166 (58%), Gaps = 8/166 (4%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
Y E +++ VLP R +EFIP I ++ L + AY SD VYFDV F Y KL
Sbjct: 96 YLEDLKRLNVLPLYAYPRATEFIPEIIEMVKVLENKGYAYEISD-GVYFDVSKFSDYGKL 154
Query: 366 WGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
RN I + KR+P DFALWK AK GEP ++S WGKGRPGWHIECSAM
Sbjct: 155 SHRNIEELQAGARIEVNPEKRNPLDFALWKKAKEGEPSWDSPWGKGRPGWHIECSAMTLK 214
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG DL FPHHENE AQS A+ +V +W+H G L
Sbjct: 215 ILGNSFDIHGGGDDLIFPHHENEIAQSEAYTGVEPFVRFWVHNGML 260
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++IYN +++ F + N + Y CG T YD H GH V D+I R L Y
Sbjct: 2 LRIYNDLSRRLEEFTTREPNKVYMYVCGLTPYDYAHAGHGRSAVVYDVIHRYLT-YLGYE 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I IS+ TDIDDKII ++N LK ++K +A+++
Sbjct: 61 VIHISNFTDIDDKIIERSNELKVNFKELAEKF 92
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GH V D+I R L Y I IS+ TDIDDKII ++N LK ++K +A+++
Sbjct: 39 GHGRSAVVYDVIHRYLT-YLGYEVIHISNFTDIDDKIIERSNELKVNFKELAEKF 92
>gi|296106895|ref|YP_003618595.1| cysteinyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
gi|295648796|gb|ADG24643.1| cysteinyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
Length = 413
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 104/172 (60%), Gaps = 12/172 (6%)
Query: 305 EYFESMEK----FGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y ++M +LPP R + I I IQ LL+ AY+ + V ++VD+FP
Sbjct: 48 QYIDAMNNDTHALNILPPDHEPRATGHIETIIRLIQRLLEKGSAYVSENGDVCYEVDTFP 107
Query: 361 HYFKLWGRN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ E + + KRSP DF LWK AKPGEP + S WG+GRPGWHIECS
Sbjct: 108 EYGKLSHKDIEGLVSGSRVEIVKEKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECS 167
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
AMA H G Q D+H GG+DL+FPHHENE AQS A + + NYWLH G L+
Sbjct: 168 AMAMHELGEQFDIHGGGLDLQFPHHENEIAQSEAATGKP-FANYWLHVGMLQ 218
>gi|226735064|sp|B8CRG0.1|SYC_SHEPW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|212557514|gb|ACJ29968.1| Cysteinyl-tRNA synthetase [Shewanella piezotolerans WP3]
Length = 459
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + P R + +P I ++ L+ + AY+ ++ V F V SFP Y +
Sbjct: 95 EMHRDFDSLNMARPDFEPRATLHMPEIIEMVEKLIAREHAYVAANGDVLFSVSSFPEYGR 154
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L G+N Q KR P DF LWK +KPGEP ++S WG GRPGWHIECSAM S
Sbjct: 155 LSGQNLEQLQAGARVEVEDAKRDPMDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ +++VNYW+HTG
Sbjct: 215 KHLGNHFDIHGGGSDLQFPHHENEIAQSCCAHD-TKYVNYWMHTG 258
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T+ K F+ + Y CG T+YD HIGH V D+I R L Y
Sbjct: 2 LKLYNTLTRQKEQFVPIQPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYL-RYSGYE 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
++TD+DDKII +AN E ++ +R
Sbjct: 61 VNFQRNITDVDDKIIKRANENNESCDSLTER 91
>gi|152964879|ref|YP_001360663.1| cysteinyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
gi|189082067|sp|A6W6G0.1|SYC_KINRD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|151359396|gb|ABS02399.1| cysteinyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
Length = 471
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 107/173 (61%), Gaps = 13/173 (7%)
Query: 300 FRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHS--VYFDVD 357
+R+E E+ + GVLPPT R + +P + IQ L++ AY +D S VYFDV
Sbjct: 91 YRFEREFSAAYAALGVLPPTVEPRATGHVPEMVELIQRLVERGHAYAAADGSGDVYFDVR 150
Query: 358 SFPHYFKLWGRNENITQHAV------KRSPFDFALWKSAKPGEPW---YESAWGKGRPGW 408
S+P Y +L + + + A KR P DFALWK AKPGEP + + WG+GRPGW
Sbjct: 151 SWPAYGELTHQRLDDMEPAADADPRGKRDPRDFALWKGAKPGEPATASWATPWGRGRPGW 210
Query: 409 HIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHT 461
H+ECSAMA + G + D+H GG+DL+FPHHENE+AQS A + + N+WLH
Sbjct: 211 HLECSAMAGRYLGPRFDVHGGGLDLRFPHHENEQAQSRAAGD--GFANFWLHN 261
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 18/114 (15%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKED 115
Y CG T SPH+GH V D++RR L + ++ +VTDIDDKI+ KA +
Sbjct: 27 YVCGATPQGSPHLGHVRAQVVFDVLRRWLVRSGY-EVTLVRNVTDIDDKILAKAAEAGTE 85
Query: 116 YKTVAKRY---------FLPLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRILE 160
+ A R+ L ++ + + G +P +++I+R++E
Sbjct: 86 WWAHAYRFEREFSAAYAALGVLPPTVEPRATGHVPE--------MVELIQRLVE 131
>gi|307245827|ref|ZP_07527913.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307254800|ref|ZP_07536627.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307259241|ref|ZP_07540971.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306853529|gb|EFM85748.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306862326|gb|EFM94293.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306866908|gb|EFM98766.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
Length = 459
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 101/183 (55%), Gaps = 8/183 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + ++ P R ++ IP I + ++ L+ AY+ +D V FDV+SF Y
Sbjct: 95 EMHKDFDDLNIIRPDVEPRATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGA 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q +VK++P DF LWK +K GEP ++S WG GRPGWHIECSAM S
Sbjct: 155 LSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAAR 477
G D+H GG DL FPHHENE AQSC H +VNYWLHTG L D
Sbjct: 215 KELGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-GDYVNYWLHTGMLTIDDEKMSKSLGN 273
Query: 478 FIT 480
F T
Sbjct: 274 FFT 276
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN + + K F N N + Y CG TVYD H GH V D+I R L Y +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYL-RYLGYN 60
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 61 LRYVRNITDVDDKIIKRA 78
>gi|296131811|ref|YP_003639058.1| cysteinyl-tRNA synthetase [Thermincola potens JR]
gi|296030389|gb|ADG81157.1| cysteinyl-tRNA synthetase [Thermincola potens JR]
Length = 487
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 100/171 (58%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y EYF+ GV T RVSE + I I+ ++ AY D VYF V+SF
Sbjct: 92 KYIREYFKDAAALGVREATVHPRVSEHLDEIIEMIRGIMKNGYAY-QLDGDVYFSVESFK 150
Query: 361 HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR+ Q KR P DFALWK+AKPGEP ++S WGKGRPGWHIECS
Sbjct: 151 GYGKLSGRSLEDMQAGARVDVDTRKRHPMDFALWKAAKPGEPAWDSPWGKGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AMA+ + G D+H GG DL FPHHENE AQ+ A+ + YW+H G +
Sbjct: 211 AMANKYLGMGFDIHGGGFDLIFPHHENEIAQAEAYAGCGPFARYWMHNGFI 261
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
IK+YN T+ K FI + + Y CGPT Y+ H+G+A + D +RR E Y
Sbjct: 3 IKLYNTCTRKKEEFIPRQPGKVDMYVCGPTTYNLIHLGNARPLIVFDTVRRYFE-YKGYQ 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TDIDDKIIN+A D T+A +Y
Sbjct: 62 VTYVQNFTDIDDKIINRAREENTDPITLAAKY 93
>gi|303251228|ref|ZP_07337406.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|307252540|ref|ZP_07534436.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|302649770|gb|EFL79948.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306860132|gb|EFM92149.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
Length = 459
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 101/183 (55%), Gaps = 8/183 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + ++ P R ++ IP I + ++ L+ AY+ +D V FDV+SF Y
Sbjct: 95 EMHKDFDDLNIIRPDVEPRATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGA 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q +VK++P DF LWK +K GEP ++S WG GRPGWHIECSAM S
Sbjct: 155 LSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAAR 477
G D+H GG DL FPHHENE AQSC H +VNYWLHTG L D
Sbjct: 215 KELGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-GDYVNYWLHTGMLTIDDEKMSKSLGN 273
Query: 478 FIT 480
F T
Sbjct: 274 FFT 276
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN + + K F N N + Y CG TVYD H GH V D+I R L Y +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYL-RYLGYN 60
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 61 LRYVRNITDVDDKIIKRA 78
>gi|148358849|ref|YP_001250056.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Corby]
gi|187629845|sp|A5IBG0.1|SYC_LEGPC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|148280622|gb|ABQ54710.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Corby]
Length = 456
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 104/172 (60%), Gaps = 12/172 (6%)
Query: 305 EYFESMEK----FGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y ++M +LPP R + I I IQ LL+ AY+ + V ++VD+FP
Sbjct: 91 QYIDAMNNDTHALNILPPDHEPRATGHIETIIRLIQRLLEKGSAYVSENGDVCYEVDTFP 150
Query: 361 HYFKLWGRN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ E + + KRSP DF LWK AKPGEP + S WG+GRPGWHIECS
Sbjct: 151 EYGKLSHKDIEGLVSGSRVEIVKEKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
AMA H G Q D+H GG+DL+FPHHENE AQS A + + NYWLH G L+
Sbjct: 211 AMAMHELGEQFDIHGGGLDLQFPHHENEIAQSEAATGKP-FANYWLHVGMLQ 261
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILE-HYFHI 90
+ +YN +T+ K PF+ + Y CG TVYD H+GHA V D++ R L F +
Sbjct: 2 LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFDV 61
Query: 91 HSIVISSVTDIDDKIINKANS 111
+ ++TDIDDKII +A+
Sbjct: 62 --TYVRNITDIDDKIIARASE 80
>gi|307250157|ref|ZP_07532117.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306857822|gb|EFM89918.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
Length = 459
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 101/183 (55%), Gaps = 8/183 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + ++ P R ++ IP I + ++ L+ AY+ +D V FDV+SF Y
Sbjct: 95 EMHKDFDDLNIIRPDVEPRATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGA 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q +VK++P DF LWK +K GEP ++S WG GRPGWHIECSAM S
Sbjct: 155 LSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAAR 477
G D+H GG DL FPHHENE AQSC H +VNYWLHTG L D
Sbjct: 215 KELGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-GDYVNYWLHTGMLTIDDEKMSKSLGN 273
Query: 478 FIT 480
F T
Sbjct: 274 FFT 276
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN + + K F N N + Y CG TVYD H GH V D+I R L Y +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYL-RYLGYN 60
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 61 LRYVRNITDVDDKIIKRA 78
>gi|303390212|ref|XP_003073337.1| cysteinyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
gi|303302483|gb|ADM11977.1| cysteinyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
Length = 482
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 112/188 (59%), Gaps = 8/188 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF- 359
+Y E+FE M+ V PP+ T V+ ++ I FI+ L AY S+ SVYF+++ +
Sbjct: 97 KYTEEFFEDMKALNVRPPSFVTFVTSYVDKIIKFIEKLEVNGFAY-ESEGSVYFNLNKYQ 155
Query: 360 -PHYFKLWGRNENIT----QHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
H + L+ + I ++ KR+P DF LWK +K EP YES WG GRPGWHIECS
Sbjct: 156 DKHGYPLFKNKDGINTEGDENKDKRNPCDFVLWKKSKENEPRYESKWGYGRPGWHIECSV 215
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLR 474
M+S G +D+H GGIDL FPHHENE AQ A+ + WV +LHTGHL DG + +
Sbjct: 216 MSSDILGEDLDIHAGGIDLAFPHHENEIAQCQAYFMKEPWVKCFLHTGHL-NIDGLKMSK 274
Query: 475 AARFITNL 482
+ + T +
Sbjct: 275 SLKNFTTI 282
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%)
Query: 29 DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
D +K+YN I+KT FI + N +K Y CGPTVYDSPHIGHA V D+IRR+L Y
Sbjct: 4 DRTLKLYNSISKTSEVFIPRRDNEVKMYICGPTVYDSPHIGHARTYVMFDVIRRVLSDYL 63
Query: 89 HIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + ++TDIDDKII +AN V ++Y
Sbjct: 64 RYNVNFVMNITDIDDKIIVRANETGVSMDEVTRKY 98
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 141 PTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
P GHA V D+IRR+L Y + + ++TDIDDKII +AN V ++Y
Sbjct: 41 PHIGHARTYVMFDVIRRVLSDYLRYNVNFVMNITDIDDKIIVRANETGVSMDEVTRKY 98
>gi|394989192|ref|ZP_10382026.1| hypothetical protein SCD_01611 [Sulfuricella denitrificans skB26]
gi|393791611|dbj|GAB71665.1| hypothetical protein SCD_01611 [Sulfuricella denitrificans skB26]
Length = 463
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 96/165 (58%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E K GV P R ++++P + + IQ L+D AY+ V + V FP Y KL G
Sbjct: 98 EDATKLGVEKPEHEPRATQYVPGMIAMIQALMDNGLAYVARSGDVCYSVHKFPGYGKLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + K P DF LWKSAKPGEP ++S WG+GRPGWHIECS M+
Sbjct: 158 KSLDDLRAGERVDVAVGKDDPLDFVLWKSAKPGEPQWDSPWGQGRPGWHIECSVMSDALL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS H Q VNYW+H G +R
Sbjct: 218 GEHFDIHGGGADLQFPHHENEIAQSEGTHGH-QHVNYWIHNGFVR 261
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILE-HYFHI 90
+KIYN ++++K FI ++ Y CG TVYD H+GHA V D+I R L F +
Sbjct: 2 LKIYNTLSRSKQDFIPIESGKVRMYVCGMTVYDYCHLGHARVMVVFDMINRWLRADGFDV 61
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TDIDDKII +A E + R+ +
Sbjct: 62 --TYVRNITDIDDKIIKRAAENHEPIDALTGRFIAAM 96
>gi|256374515|ref|YP_003098175.1| cysteinyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
gi|255918818|gb|ACU34329.1| cysteinyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
Length = 464
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 102/168 (60%), Gaps = 8/168 (4%)
Query: 298 FNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVD 357
+ F +E + ++ E G LPPT A R + + + ++ L+D AY ++ VYF V
Sbjct: 89 WAFEHERAFDDAYEALGCLPPTYAPRATGHVTQMVELMRRLIDAGHAY-AANGDVYFSVS 147
Query: 358 SFPHYFKLWGRNENITQHAV-----KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
SFP Y KL G+ + Q KR P DF LWK+AKPGEP + + WG GRPGWH+EC
Sbjct: 148 SFPEYGKLSGQRVDEVQQGESELTGKRDPRDFTLWKAAKPGEPSWPTPWGDGRPGWHLEC 207
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLH 460
SAMA+ + G D+H GGIDL FPHHENE+AQS A + + YW+H
Sbjct: 208 SAMATEYLGSTFDVHGGGIDLIFPHHENEQAQSRAVGD--GFARYWMH 253
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ IY+ ++ F Q Y CG TV PHIGH + D++RR L H
Sbjct: 3 LHIYDTASRELREFRPQISGTASIYVCGATVQGVPHIGHVRSGLNFDVLRRWLART-HER 61
Query: 92 SIVISSVTDIDDKIINKA 109
+++ +VTDIDDKI+ K+
Sbjct: 62 VVLVRNVTDIDDKILVKS 79
>gi|403508980|ref|YP_006640618.1| cysteine--tRNA ligase [Nocardiopsis alba ATCC BAA-2165]
gi|402799111|gb|AFR06521.1| cysteine--tRNA ligase [Nocardiopsis alba ATCC BAA-2165]
Length = 466
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 103/173 (59%), Gaps = 11/173 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHS--VYFDVDS 358
R + + + + G LPPT R + +P + ++ L+D AY D S VYFDV S
Sbjct: 92 RNQRAFTHAYDALGCLPPTVEPRATGHVPEMIELMRRLIDAGHAYPADDGSGDVYFDVGS 151
Query: 359 FPHYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIE 411
+P Y +L + + A KR P DFALWK AKPGEP +E+ WG+GRPGWH+E
Sbjct: 152 YPAYGELSNQRPDQVVEAADTDRERDKRDPRDFALWKGAKPGEPSWETPWGRGRPGWHLE 211
Query: 412 CSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
CSAMA+ + G D+H GG+DL FPHHENE+AQS A + + YWLH G L
Sbjct: 212 CSAMATKYLGPSFDIHGGGLDLVFPHHENEQAQSRAAGD--GFARYWLHNGLL 262
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++ Y+ + F + Y CG TV PHIGH V DI+RR L H +
Sbjct: 3 LRFYDTSARQVREFSPLREGCASLYLCGATVQAPPHIGHIRSGVNFDILRRWLTHLGY-E 61
Query: 92 SIVISSVTDIDDKIINKA 109
+VTDIDDKII A
Sbjct: 62 VTFCRNVTDIDDKIIATA 79
>gi|329906071|ref|ZP_08274354.1| Cysteinyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
gi|327547346|gb|EGF32177.1| Cysteinyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
Length = 464
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 96/163 (58%), Gaps = 11/163 (6%)
Query: 313 FGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRN--- 369
G+LPPT A R + ++P + + I L + AY G D V + V FP Y KL G++
Sbjct: 105 LGILPPTHAPRATRYVPQMLNMITRLQEKGLAYQGDDGDVNYSVRDFPGYGKLSGKSLDD 164
Query: 370 ----ENITQHAVKRSPFDFALWKSAKPGEPW---YESAWGKGRPGWHIECSAMASHFFGG 422
E + + KR P DF LWK+AK EP + S WG GRPGWHIECSAMA G
Sbjct: 165 LRAGERVDVNTGKRDPLDFVLWKAAKDSEPEDAKWASPWGHGRPGWHIECSAMACALLGE 224
Query: 423 QVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
Q D+H GG DL+FPHHENE AQS N + NYWLH GH+R
Sbjct: 225 QFDIHGGGTDLQFPHHENEIAQSEG-ANDKPFANYWLHNGHVR 266
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Query: 30 TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
T +KIYN + + K F + Y CG T+YD HIGH + D++ R L+
Sbjct: 2 TSLKIYNTLAREKQLFTPMVAGEARMYVCGMTIYDYCHIGHGRMMMAFDVVYRWLQ--VS 59
Query: 90 IHSIV-ISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIP----TRG 144
+S+ + ++TDIDDKII +A KE ++ +R+ + + +G +P R
Sbjct: 60 GYSVTYVRNITDIDDKIIRRAVENKESISSLTERFIDAMAYDT---AALGILPPTHAPRA 116
Query: 145 HAVCNVKLDIIRRILE 160
L++I R+ E
Sbjct: 117 TRYVPQMLNMITRLQE 132
>gi|410464212|ref|ZP_11317669.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus str. Maddingley
MBC34]
gi|409982672|gb|EKO39104.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus str. Maddingley
MBC34]
Length = 485
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 104/172 (60%), Gaps = 8/172 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY ++E M+K G+L P + +E+I + S Q L+D+ AY VYF V SF
Sbjct: 90 RYIATFYEDMDKLGILRPNAEPKATEYIGEMASLAQRLIDSGHAYRTPSGDVYFRVRSFA 149
Query: 361 HYFKLWGRN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR+ E++ A K P DFALWK++KPGEP +ES +G GRPGWH+ECS
Sbjct: 150 GYGKLSGRDVEDMRSGARVAPGEEKEDPLDFALWKASKPGEPVWESPFGPGRPGWHLECS 209
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
AM+ G +D+H GG DL FPHHENE AQS A ++ YW+H G +R
Sbjct: 210 AMSEKLLGMPIDIHGGGQDLIFPHHENEIAQSEAAIG-GEFCRYWVHNGFVR 260
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+++YN +T+TK PF+ + + Y CG T YD HIGHA +V D++ R L H
Sbjct: 1 MQLYNTMTRTKEPFVSRVPGKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRH-IGFD 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKII KAN+ + +A+RY
Sbjct: 60 VTFVRNFTDVDDKIIKKANAEGTTSQEIAERY 91
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA +V D++ R L H + + TD+DDKII KAN+ + +A+RY
Sbjct: 38 GHARSSVVFDVLVRYLRH-IGFDVTFVRNFTDVDDKIIKKANAEGTTSQEIAERY 91
>gi|256827720|ref|YP_003151679.1| cysteinyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
gi|256583863|gb|ACU94997.1| cysteinyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
Length = 499
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 105/181 (58%), Gaps = 20/181 (11%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y + E M GVL P + R +E IP + +Q L+DT AY + VYF V SFP
Sbjct: 91 KYTDAFIEDMHAMGVLDPDKRPRATEEIPEMIELVQRLIDTGHAYEAA-GDVYFSVRSFP 149
Query: 361 HYFKLWGRN----------------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKG 404
Y L R+ E I KR P DFA+WK+AKPGEP ++S WG+G
Sbjct: 150 AYGHLSHRDIDELESGHRDLRASHVEGIGDR--KRDPLDFAIWKAAKPGEPSWKSPWGQG 207
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
RPGWHIECSAM+ + G D+H GG DL FPHHENE AQS A ++ + NYW+H+G L
Sbjct: 208 RPGWHIECSAMSRKYLGLPFDVHGGGADLIFPHHENETAQSEAAWGET-FTNYWMHSGML 266
Query: 465 R 465
+
Sbjct: 267 Q 267
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I+IYN T+ K F ++ Y CGPTVY+ HIG+A V DI+RR L +
Sbjct: 2 IRIYNTQTRKKEDFKTIEVGRVRMYVCGPTVYNYIHIGNARTFVSFDIVRRYL-MWRGFD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ +VTD+DDKII +A + D +A++Y
Sbjct: 61 VTFVQNVTDVDDKIIKRAGEEECDAAEIARKY 92
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 104 KIINKANSLKEDYKTVAK---RYFL--PLIFKILHQKVVGSIPTRGHAVCNVKLDIIRRI 158
+I N KED+KT+ R ++ P ++ +H G+A V DI+RR
Sbjct: 3 RIYNTQTRKKEDFKTIEVGRVRMYVCGPTVYNYIHI---------GNARTFVSFDIVRRY 53
Query: 159 LEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
L + + +VTD+DDKII +A + D +A++Y
Sbjct: 54 L-MWRGFDVTFVQNVTDVDDKIIKRAGEEECDAAEIARKY 92
>gi|153005356|ref|YP_001379681.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
gi|171769386|sp|A7HDA1.1|SYC_ANADF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|152028929|gb|ABS26697.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
Length = 482
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 99/173 (57%), Gaps = 11/173 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY E+ E M+ G L P A +VSE +P I + I +L++ AY ++ VYF V +FP
Sbjct: 92 RYAREFDEDMDALGNLRPDVAPKVSEHVPQIVAMISSLVEKGFAYAAANGDVYFSVRAFP 151
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L RN + KR P DFALWK+AKPGEP ++S WG GRPGWHIECS
Sbjct: 152 DYGRLSKRNLDDLLSGARVEPGEAKRDPLDFALWKAAKPGEPTWDSPWGGGRPGWHIECS 211
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF----HNQSQWVNYWLHTG 462
AM G +DLH GG DL FPHH NE AQS A + +W+H G
Sbjct: 212 AMTLAHLGVPIDLHGGGKDLVFPHHTNEIAQSAAAVGDGRTAESFCRHWMHHG 264
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 16/143 (11%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHI 90
I I + +T TK +++YACGPTVYDS H+GH V D ++R + + +
Sbjct: 3 IVISDTLTGTKRELQPIEPGKIRFYACGPTVYDSAHVGHGRSYVVWDLVVRHLRARGYEV 62
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNV 150
+ + TD+DDKII +A +ED +A RY + A+ N+
Sbjct: 63 R--YVRNFTDVDDKIIRRATERREDPVALAARYAREFDEDM-------------DALGNL 107
Query: 151 KLDIIRRILEHYFHIHSIVISSV 173
+ D+ ++ EH I +++ S V
Sbjct: 108 RPDVAPKVSEHVPQIVAMISSLV 130
>gi|255318181|ref|ZP_05359420.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262379610|ref|ZP_06072766.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
gi|255304727|gb|EET83905.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262299067|gb|EEY86980.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
Length = 473
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 101/173 (58%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + G L P A R +E+I +Q+ I L+D AY ++ VYF V+ F Y +L G
Sbjct: 100 EDAHRLGCLAPDEAPRATEYIDQMQNMIGKLVDNGSAYPATNGDVYFQVEQFNKYGRLSG 159
Query: 368 RNENITQHAV---------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R + Q K+ PFDF LWK AK EP++ S WGKGRPGWHIECSAM++
Sbjct: 160 RKLDDMQAGASDRVDVEVDKKHPFDFVLWKHAKENEPFWNSPWGKGRPGWHIECSAMSTC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A + Q+VNYW+H G + DG +
Sbjct: 220 CLGNHFDIHGGGSDLLFPHHENEIAQSEAATGE-QYVNYWMHVGFI-NVDGEK 270
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ + H+ Y CG TVYD HIGHA V D IIR + + +
Sbjct: 6 LYNSEQRKKVEFVPRKAGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWEVK- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TDIDDKII +AN E + + R+ +
Sbjct: 65 -YVRNITDIDDKIIKRANENGETIQALTDRFIQAM 98
>gi|449328764|gb|AGE95040.1| cysteinyl tRNA synthetase [Encephalitozoon cuniculi]
Length = 480
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 101/170 (59%), Gaps = 7/170 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSF- 359
+Y E+FE M+ V P+ T V+ ++ I F++ L AY S SVYFD++S+
Sbjct: 95 KYTEEFFEDMKTLNVRSPSFVTFVTSYVDKIVKFVEKLEANGLAY-ESRGSVYFDLNSYQ 153
Query: 360 -----PHYFKLWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
P + G N ++ KRSP DF LWK +K EP YES WG GRPGWHIECS
Sbjct: 154 QRYSYPLFKSKDGINSEGDENKDKRSPCDFVLWKRSKENEPRYESKWGHGRPGWHIECSV 213
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
M+S G +D+H GG+DL FPHHENE AQ A+ Q WV +LHTGHL
Sbjct: 214 MSSDILGEDLDIHAGGVDLAFPHHENEIAQCQAYFMQEPWVKCFLHTGHL 263
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%)
Query: 29 DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
D +K+YN IT+T F + N +K Y CGPTVYDS HIGHA V D+IRR+L Y
Sbjct: 2 DKTLKLYNSITRTIDIFTPRKGNEVKMYICGPTVYDSSHIGHARTYVMFDVIRRVLSDYL 61
Query: 89 HIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + ++TDIDDKII +AN + V ++Y
Sbjct: 62 KYNVRFVMNITDIDDKIIARANETGASMEEVTRKY 96
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V D+IRR+L Y + + ++TDIDDKII +AN + V ++Y
Sbjct: 42 GHARTYVMFDVIRRVLSDYLKYNVRFVMNITDIDDKIIARANETGASMEEVTRKY 96
>gi|116749069|ref|YP_845756.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
gi|171460796|sp|A0LIR9.1|SYC_SYNFM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|116698133|gb|ABK17321.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
Length = 493
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 101/170 (59%), Gaps = 11/170 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY-IGSDHSVYFDVDSF 359
RY ++E M+ GVL P +E +P + I+ L+D AY G+D V+F+++ F
Sbjct: 92 RYIAAFYEDMDALGVLRPDLEPLATENVPGMIEIIRVLMDKGIAYQAGAD--VFFEIEKF 149
Query: 360 PHYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
P Y KL GR + A KR+P DF LWK +KPGEP ++S WG GRPGWHIEC
Sbjct: 150 PGYGKLSGRQIEDMLAGARVEVDARKRNPLDFVLWKGSKPGEPSWDSPWGPGRPGWHIEC 209
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
SAM S F G D+H GG DL FPHHENE AQS A +V YWLH G
Sbjct: 210 SAMGSRFLGKTFDIHGGGKDLIFPHHENEIAQSEAAFGMP-FVRYWLHNG 258
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ +YN +TK+K FI +K+Y CG TVYD HIGHA + D+I R L +
Sbjct: 3 LHVYNTLTKSKEEFIPLEPGKVKFYVCGVTVYDLSHIGHARSAIVFDVIYRYL-RFLGFE 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKII +AN D +++A+RY
Sbjct: 62 VTYVRNFTDVDDKIIRRANDAGTDCRSIAQRY 93
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA + D+I R L + + + TD+DDKII +AN D +++A+RY
Sbjct: 40 GHARSAIVFDVIYRYL-RFLGFEVTYVRNFTDVDDKIIRRANDAGTDCRSIAQRY 93
>gi|218778624|ref|YP_002429942.1| cysteinyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
gi|218760008|gb|ACL02474.1| Cysteinyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
Length = 474
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 100/165 (60%), Gaps = 9/165 (5%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E+ M+ VL PT R +EFI I L++ AY+ D VYFDV SF Y K
Sbjct: 96 EFHRDMDALAVLRPTLEPRATEFIKEIIEVTSKLVEKGHAYV-VDGDVYFDVRSFESYGK 154
Query: 365 LWGRN-ENITQHAV------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L GR E++ A K+ PFDFALWK+ KPGEP +ES WG+GRPGWHIECSAM+
Sbjct: 155 LSGRKLEDMEAGARVKVDSRKKDPFDFALWKAKKPGEPAWESPWGEGRPGWHIECSAMSW 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL FPHHENE AQS A Q Q+V YW+H G
Sbjct: 215 SRLGETFDIHGGGQDLIFPHHENEVAQSEAAFGQ-QFVRYWMHNG 258
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+ +YN +T+ K F H+ Y CGPTVYDS HIGHA V DI+ R L+ +
Sbjct: 2 ALTLYNTLTRQKETFKPLKPGHVSMYVCGPTVYDSSHIGHARSAVVFDIVFRYLQESGY- 60
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKIIN+AN D + +++ Y
Sbjct: 61 EVTYVRNFTDVDDKIINRANERDMDCQALSEIY 93
>gi|217973913|ref|YP_002358664.1| cysteinyl-tRNA synthetase [Shewanella baltica OS223]
gi|254781693|sp|B8E5F2.1|SYC_SHEB2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|217499048|gb|ACK47241.1| cysteinyl-tRNA synthetase [Shewanella baltica OS223]
Length = 459
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R + I I ++ LL AY+ SD V F V S+P Y +
Sbjct: 95 EMHQDFDALNMLRPDFEPRATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGR 154
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L G+N + Q K++P DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSGQNLDQLQAGARVEVDETKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ + +VNYW+HTG
Sbjct: 215 KHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHD-TPYVNYWMHTG 258
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN IT+ K F + Y CG T+YD HIGH V D+I R L Y
Sbjct: 2 LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYL-RYAGYE 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
++TD+DDKII +AN E + + +R
Sbjct: 61 VNFQRNITDVDDKIIKRANENNESCEALTER 91
>gi|160874741|ref|YP_001554057.1| cysteinyl-tRNA synthetase [Shewanella baltica OS195]
gi|378707994|ref|YP_005272888.1| cysteinyl-tRNA synthetase [Shewanella baltica OS678]
gi|418023622|ref|ZP_12662607.1| cysteinyl-tRNA synthetase [Shewanella baltica OS625]
gi|187631635|sp|A9KWH4.1|SYC_SHEB9 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|160860263|gb|ABX48797.1| cysteinyl-tRNA synthetase [Shewanella baltica OS195]
gi|315266983|gb|ADT93836.1| cysteinyl-tRNA synthetase [Shewanella baltica OS678]
gi|353537505|gb|EHC07062.1| cysteinyl-tRNA synthetase [Shewanella baltica OS625]
Length = 459
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R + I I ++ LL AY+ SD V F V S+P Y +
Sbjct: 95 EMHQDFDALNMLRPDFEPRATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGR 154
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L G+N + Q K++P DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSGQNLDQLQAGARVEVDETKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ + +VNYW+HTG
Sbjct: 215 KHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHD-TPYVNYWMHTG 258
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN IT+ K F + Y CG T+YD HIGH V D+I R L Y
Sbjct: 2 LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYL-RYAGYE 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
++TD+DDKII +AN E + + +R
Sbjct: 61 VNFQRNITDVDDKIIKRANENNESCEALTER 91
>gi|421465010|ref|ZP_15913698.1| cysteine--tRNA ligase [Acinetobacter radioresistens WC-A-157]
gi|400204272|gb|EJO35256.1| cysteine--tRNA ligase [Acinetobacter radioresistens WC-A-157]
Length = 473
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 101/173 (58%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + G L P A R +E+I +Q+ I L+D AY ++ VYF V+ F Y +L G
Sbjct: 100 EDAHRLGCLEPDEAPRATEYIDQMQNMIGKLVDNGSAYPATNGDVYFQVEQFNKYGRLSG 159
Query: 368 RNENITQHAV---------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R + Q K+ PFDF LWK AK EP++ S WGKGRPGWHIECSAM++
Sbjct: 160 RKLDDMQAGASDRVDVEVDKKHPFDFVLWKHAKENEPFWNSPWGKGRPGWHIECSAMSTC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A + Q+VNYW+H G + DG +
Sbjct: 220 CLGNHFDIHGGGSDLLFPHHENEIAQSEAATGE-QYVNYWMHVGFI-NVDGEK 270
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ + H+ Y CG TVYD HIGHA V D IIR + + +
Sbjct: 6 LYNSEQRKKVEFVPRKAGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWEVK- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TDIDDKII +AN E + + R+ +
Sbjct: 65 -YVRNITDIDDKIIKRANENGETIQALTDRFIQAM 98
>gi|421857183|ref|ZP_16289537.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|403187405|dbj|GAB75738.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 473
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 101/173 (58%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + G L P A R +E+I +Q+ I L+D AY ++ VYF V+ F Y +L G
Sbjct: 100 EDAHRLGCLEPDEAPRATEYIDQMQNMIGKLVDNGSAYPATNGDVYFQVEQFNKYGRLSG 159
Query: 368 RNENITQHAV---------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R + Q K+ PFDF LWK AK EP++ S WGKGRPGWHIECSAM++
Sbjct: 160 RKLDDMQAGASDRVDVEVDKKHPFDFVLWKHAKENEPFWNSPWGKGRPGWHIECSAMSTC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A + Q+VNYW+H G + DG +
Sbjct: 220 CLGNHFDIHGGGSDLLFPHHENEIAQSEAATGE-QYVNYWMHVGFI-NVDGEK 270
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ + H+ Y CG TVYD HIGHA V D IIR + + +
Sbjct: 6 LYNSEQRKKVEFVPRKAGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWEVK- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TDIDDKII +AN E + + R+ +
Sbjct: 65 -YVRNITDIDDKIIKRANENGETIQALTDRFIQAM 98
>gi|239906952|ref|YP_002953693.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
gi|259511829|sp|C4XSW5.1|SYC_DESMR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|239796818|dbj|BAH75807.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
Length = 485
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 104/172 (60%), Gaps = 8/172 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY ++E M+K G+L P + +E+I + S Q L+D+ AY VYF V SF
Sbjct: 90 RYIATFYEDMDKLGILRPNAEPKATEYIGEMASLAQRLIDSGHAYRTPSGDVYFRVRSFA 149
Query: 361 HYFKLWGRN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR+ E++ A K P DFALWK++KPGEP +ES +G GRPGWH+ECS
Sbjct: 150 GYGKLSGRDVEDMRSGARVAPGEEKEDPLDFALWKASKPGEPVWESPFGPGRPGWHLECS 209
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
AM+ G +D+H GG DL FPHHENE AQS A ++ YW+H G +R
Sbjct: 210 AMSEKLLGMPIDIHGGGQDLIFPHHENEIAQSEAAIG-GEFCRYWVHNGFVR 260
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+++YN +T+TK PF+ + + Y CG T YD HIGHA +V D++ R L H
Sbjct: 1 MQLYNTMTRTKEPFVSRVPGKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRH-IGFD 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKII KAN+ + +A+RY
Sbjct: 60 VTFVRNFTDVDDKIIKKANAEGTTSQEIAERY 91
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA +V D++ R L H + + TD+DDKII KAN+ + +A+RY
Sbjct: 38 GHARSSVVFDVLVRYLRH-IGFDVTFVRNFTDVDDKIIKKANAEGTTSQEIAERY 91
>gi|333985593|ref|YP_004514803.1| cysteinyl-tRNA synthetase [Methylomonas methanica MC09]
gi|333809634|gb|AEG02304.1| cysteinyl-tRNA synthetase [Methylomonas methanica MC09]
Length = 471
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 100/165 (60%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E VLPP + ++ I I + I L+ + AY+G++ V++ V+ F Y KL G
Sbjct: 112 EDERALAVLPPDIEPKATQSIADIINMIAALIGREYAYVGANGDVFYAVNRFQGYGKLSG 171
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+N E + KR P DF LWK AKPGEP++ES WG GRPGWHIECSAM++
Sbjct: 172 KNIEDLNAGERVDVDNAKRDPLDFVLWKMAKPGEPYWESPWGHGRPGWHIECSAMSTCCL 231
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG+DL+FPHHENE AQS + +VNYW+H G +R
Sbjct: 232 GNHFDIHGGGMDLQFPHHENEIAQSEGATGEP-FVNYWMHNGFVR 275
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T++K FI + + Y CG TVYD HIGHA V D + R L H +
Sbjct: 16 LKIYNTLTRSKQEFIPRQPGKVGMYVCGMTVYDYCHIGHARVMVVFDTVARYLRHAGY-Q 74
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ +VTDIDDKII +AN ED+ + +R+
Sbjct: 75 LTYVRNVTDIDDKIIQRANENGEDFAALTERF 106
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA V D + R L H + + +VTDIDDKII +AN ED+ + +R+
Sbjct: 53 GHARVMVVFDTVARYLRHAGY-QLTYVRNVTDIDDKIIQRANENGEDFAALTERF 106
>gi|153000119|ref|YP_001365800.1| cysteinyl-tRNA synthetase [Shewanella baltica OS185]
gi|373948991|ref|ZP_09608952.1| cysteinyl-tRNA synthetase [Shewanella baltica OS183]
gi|386325170|ref|YP_006021287.1| cysteinyl-tRNA synthetase [Shewanella baltica BA175]
gi|187631634|sp|A6WLP8.1|SYC_SHEB8 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|151364737|gb|ABS07737.1| cysteinyl-tRNA synthetase [Shewanella baltica OS185]
gi|333819315|gb|AEG11981.1| cysteinyl-tRNA synthetase [Shewanella baltica BA175]
gi|373885591|gb|EHQ14483.1| cysteinyl-tRNA synthetase [Shewanella baltica OS183]
Length = 459
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R + I I ++ LL AY+ SD V F V S+P Y +
Sbjct: 95 EMHQDFDALNMLRPDFEPRATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGR 154
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L G+N + Q K++P DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSGQNLDQLQAGARVEVDETKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ + +VNYW+HTG
Sbjct: 215 KHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHD-TPYVNYWMHTG 258
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN IT+ K F + Y CG T+YD HIGH V D+I R L Y
Sbjct: 2 LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYL-RYAGYE 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
++TD+DDKII +AN E + + +R
Sbjct: 61 VNFQRNITDVDDKIIKRANENNESCEALTER 91
>gi|121535688|ref|ZP_01667492.1| cysteinyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
gi|121305719|gb|EAX46657.1| cysteinyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
Length = 370
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 106/172 (61%), Gaps = 10/172 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY-IGSDHSVYFDVDSF 359
RY YFE M+K V RVS+ I I + +Q L+D AY +G D VY+ V+ F
Sbjct: 92 RYIAAYFEVMDKLNVRRAHVYPRVSDHIGDIIAIVQRLIDKGYAYTVGGD--VYYSVEKF 149
Query: 360 PHYFKLWGRN-ENITQHAV------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
Y +L GR+ E++ A KR P DFALWKSAKPGEP ++S WG GRPGWHIEC
Sbjct: 150 APYGQLSGRSLEDMKAGARIDVDERKRHPMDFALWKSAKPGEPAWDSPWGPGRPGWHIEC 209
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
SAMA + G D H GG DL FPHHENE AQS A+ ++ +V YWLH G +
Sbjct: 210 SAMALKYLGNGFDFHGGGSDLIFPHHENEIAQSEAYTGEAPFVRYWLHNGFI 261
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 9/96 (9%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEH----Y 87
+++YN +TK K F+ + +K Y CG T Y+ PHIG+A + D+IRR LEH
Sbjct: 3 LRVYNTLTKQKEEFVPREPGKVKMYVCGVTPYNHPHIGNARPFITWDVIRRYLEHRGFAV 62
Query: 88 FHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
FH+ + TDIDDKIIN AN + T+A RY
Sbjct: 63 FHVQNF-----TDIDDKIINTANQEGVTWDTIANRY 93
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 14/105 (13%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPTR----GHAVCNVKLDIIRRILEH----YFHIHSIV 169
T K F+P + V G P G+A + D+IRR LEH FH+ +
Sbjct: 10 TKQKEEFVPREPGKVKMYVCGVTPYNHPHIGNARPFITWDVIRRYLEHRGFAVFHVQNF- 68
Query: 170 ISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQKVVRK 214
TDIDDKIIN AN + T+A RY + F+++ + VR+
Sbjct: 69 ----TDIDDKIINTANQEGVTWDTIANRY-IAAYFEVMDKLNVRR 108
>gi|417853615|ref|ZP_12498974.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. Anand1_goat]
gi|338219221|gb|EGP04909.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. Anand1_goat]
Length = 459
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 100/167 (59%), Gaps = 8/167 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + VL P R + IP I + I+ L+ + AY+ ++ V FDV+SF Y K
Sbjct: 95 EMHKDFDALNVLRPDVEPRATHHIPEIIAMIEKLIARQHAYVSANGDVMFDVESFKEYGK 154
Query: 365 LWGRNENITQHA-------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q VK++P DF LWK +KPGEP + S WG+GRPGWHIECSAM
Sbjct: 155 LSRQNLEQLQAGARVEIVNVKKNPMDFVLWKMSKPGEPSWSSPWGEGRPGWHIECSAMNH 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG DL FPHHENE AQSC H+ ++VNYW+H+G +
Sbjct: 215 KELGEHFDIHGGGSDLTFPHHENEIAQSCCAHS-GRYVNYWIHSGMI 260
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KI+N +T+ K F + N + Y CG TVYD H+GH V D+I R L Y
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 61 LTYVRNITDVDDKIIKRA 78
>gi|71026881|ref|XP_763084.1| cysteinyl-tRNA synthetase [Theileria parva strain Muguga]
gi|68350037|gb|EAN30801.1| cysteinyl-tRNA synthetase, putative [Theileria parva]
Length = 659
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 114/181 (62%), Gaps = 19/181 (10%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E E++ M GV P TRVS+++ I FI+ +LD AY+ SD SVYFD+++F
Sbjct: 160 WEREFWNDMLSLGVSLPDCITRVSDYMVEIVDFIKKILDNGYAYV-SDGSVYFDIEAFRS 218
Query: 362 -----YFKLWGRNENITQHAV------------KRSPFDFALWKSAKPGEPWYESAWGKG 404
Y KL + N + K+S DFALWK +K EP ++S WGKG
Sbjct: 219 SGKHVYAKLEPTSFNDLNRILDAEGTLGEVSVNKKSKSDFALWKKSKVNEPSWDSPWGKG 278
Query: 405 RPGWHIECSAMASHFFGGQV-DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGH 463
RPGWHIECSAM++ FG +V D+H+GG+DL+FPHH+NE AQS A+ + ++W NY+LH GH
Sbjct: 279 RPGWHIECSAMSTCIFGKEVFDIHSGGVDLRFPHHDNEIAQSEAYFDSNKWANYFLHFGH 338
Query: 464 L 464
L
Sbjct: 339 L 339
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 9/155 (5%)
Query: 14 ATSCESPKWSLPSGYD---TGIKIYNPIT-KTKVPFIIQNKNHLKWYACGPTVYDSPHIG 69
A E KW +PS D TG+ + N ++ +KV F+ + +KWY CGPTVYD H+G
Sbjct: 47 ANESELRKWEIPSKKDKFLTGLYVKNSLSPSSKVEFVPEEGRKVKWYTCGPTVYDVAHMG 106
Query: 70 HAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIF 129
HA + D IR ILE+Y + + ++TD+DDKII +A + + Y V+ +
Sbjct: 107 HARTYIACDTIRSILENYLNYDLFFVENITDVDDKIIQRALNEGKSYSEVSSHWEREFWN 166
Query: 130 KILHQKVVGSIP---TRGHAVCNVKLDIIRRILEH 161
+L V S+P TR +D I++IL++
Sbjct: 167 DMLSLGV--SLPDCITRVSDYMVEIVDFIKKILDN 199
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 136 VVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVA 195
V + GHA + D IR ILE+Y + + ++TD+DDKII +A + + Y V+
Sbjct: 98 TVYDVAHMGHARTYIACDTIRSILENYLNYDLFFVENITDVDDKIIQRALNEGKSYSEVS 157
Query: 196 KRY 198
+
Sbjct: 158 SHW 160
>gi|126173835|ref|YP_001049984.1| cysteinyl-tRNA synthetase [Shewanella baltica OS155]
gi|386340595|ref|YP_006036961.1| cysteinyl-tRNA synthetase [Shewanella baltica OS117]
gi|187631633|sp|A3D302.1|SYC_SHEB5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|125997040|gb|ABN61115.1| cysteinyl-tRNA synthetase [Shewanella baltica OS155]
gi|334862996|gb|AEH13467.1| cysteinyl-tRNA synthetase [Shewanella baltica OS117]
Length = 459
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R + I I ++ LL AY+ SD V F V S+P Y +
Sbjct: 95 EMHQDFDALNMLRPDFEPRATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGR 154
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L G+N + Q K++P DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSGQNLDQLQAGARVEVDETKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ + +VNYW+HTG
Sbjct: 215 KHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHD-TPYVNYWMHTG 258
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN IT+ K F + Y CG T+YD HIGH V D+I R L Y
Sbjct: 2 LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYL-RYAGYE 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
++TD+DDKII +AN E + + +R
Sbjct: 61 VNFQRNITDVDDKIIKRANENNESCEALTER 91
>gi|416074249|ref|ZP_11584479.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|444337722|ref|ZP_21151657.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|348006937|gb|EGY47302.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|443546405|gb|ELT56069.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
Length = 469
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 101/171 (59%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R +E ++ + +L P R + IP I +Q L+ AY+ + V FDV+SF
Sbjct: 101 RMVVEMYKDFDALNILRPDFEPRATHHIPEIIDIVQKLIQRGHAYVADNGDVMFDVESFK 160
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ I + +K++ DF LWK +KP EP ++S WGKGRPGWHIECS
Sbjct: 161 DYGKLSRQDLEQLQAGARIEINEIKKNTMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECS 220
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM S G D+H GG DL FPHHENE AQSC H +Q+VNYWLH+G +
Sbjct: 221 AMNSKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-NQYVNYWLHSGMI 270
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K++N +T+ K F + + Y CG TVYD HIGH V D+I R L Y
Sbjct: 12 LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYL-RYLGYD 70
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TD+DDKII +A KE + R + +
Sbjct: 71 LTYVRNITDVDDKIIKRALENKETCDQLVDRMVVEM 106
>gi|381160970|ref|ZP_09870202.1| cysteinyl-tRNA synthetase [Thiorhodovibrio sp. 970]
gi|380879034|gb|EIC21126.1| cysteinyl-tRNA synthetase [Thiorhodovibrio sp. 970]
Length = 466
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 103/177 (58%), Gaps = 12/177 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E + GV PPT R + I I + +Q L++ + AY+ VY+ V SF
Sbjct: 91 RFIAAMHEDAARLGVRPPTLEPRATAHIDEILAMVQRLIEREHAYVADKGDVYYQVSSFS 150
Query: 361 HYFKLWGRNE---------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIE 411
Y +L G++ ++ QH KR P DF LWK+AKPGEP +ES WG GRPGWHIE
Sbjct: 151 GYGRLSGKDPGDLRAGARVDVDQH--KRDPLDFVLWKAAKPGEPAWESPWGPGRPGWHIE 208
Query: 412 CSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTD 468
CSAM++ G D+H GG DL+FPHH+NE AQS + +VN W+H G +R D
Sbjct: 209 CSAMSTQCLGNHFDIHGGGADLQFPHHDNEIAQSEGATGEP-FVNIWMHNGFVRIND 264
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ IYN +T+ K PF+ + Y CG TVYD H+GHA V D++ R L+ +
Sbjct: 2 LHIYNSLTRHKEPFVPIEPGRARMYVCGMTVYDLCHLGHARVLVVFDMVYRYLQQAGYAV 61
Query: 92 SIVISSVTDIDDKIINKA 109
+ V ++TDIDDKII +A
Sbjct: 62 TYV-RNITDIDDKIIARA 78
>gi|294141771|ref|YP_003557749.1| cysteinyl-tRNA synthetase [Shewanella violacea DSS12]
gi|293328240|dbj|BAJ02971.1| cysteinyl-tRNA synthetase [Shewanella violacea DSS12]
Length = 459
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 94/152 (61%), Gaps = 8/152 (5%)
Query: 318 PTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRN-ENITQHA 376
P R + +P I ++ L++ AY+ + V F V SFP Y +L G+N E + A
Sbjct: 108 PDFEPRATLHMPEIIDMVEKLIEKDHAYVSGNGDVLFSVSSFPEYGRLSGQNIEQLQAGA 167
Query: 377 ------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGG 430
KR P DF LWK +KPGEP ++S WG GRPGWHIECSAM S G D+H GG
Sbjct: 168 RVEVEDTKRDPMDFVLWKMSKPGEPTWDSPWGAGRPGWHIECSAMNSKHLGQHFDIHGGG 227
Query: 431 IDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
DL+FPHHENE AQSC H+ S +VNYW+HTG
Sbjct: 228 SDLQFPHHENEIAQSCCAHDTS-YVNYWMHTG 258
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T+ K F + Y CG T+YD HIGH V D+I R L Y
Sbjct: 2 LKLYNSLTRQKEEFKPIQPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYL-RYSGYE 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
++TD+DDKII +A KE +++ +R
Sbjct: 61 VNFQRNITDVDDKIIKRAAENKESCESLTER 91
>gi|378773899|ref|YP_005176142.1| cysteinyl-tRNA synthetase [Pasteurella multocida 36950]
gi|356596447|gb|AET15173.1| cysteinyl-tRNA synthase [Pasteurella multocida 36950]
Length = 459
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 100/167 (59%), Gaps = 8/167 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + VL P R + IP I + I+ L+ + AY+ ++ V FDV+SF Y K
Sbjct: 95 EMHKDFDALNVLRPDVEPRATHHIPEIIAMIEKLIARQHAYVSANGDVMFDVESFKEYGK 154
Query: 365 LWGRNENITQHA-------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q VK++P DF LWK +KPGEP + S WG+GRPGWHIECSAM
Sbjct: 155 LSRQNLEQLQAGARVEIVNVKKNPMDFVLWKMSKPGEPSWSSPWGEGRPGWHIECSAMNH 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG DL FPHHENE AQSC H+ ++VNYW+H+G +
Sbjct: 215 KELGEHFDIHGGGSDLTFPHHENEIAQSCCAHS-GRYVNYWIHSGMI 260
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KI+N +T+ K F + N + Y CG TVYD H+GH V D+I R L Y +
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYL-RYLGYN 60
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 61 LTYVRNITDVDDKIIKRA 78
>gi|357419735|ref|YP_004932727.1| cysteinyl-tRNA synthetase [Thermovirga lienii DSM 17291]
gi|355397201|gb|AER66630.1| cysteinyl-tRNA synthetase [Thermovirga lienii DSM 17291]
Length = 476
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 101/166 (60%), Gaps = 9/166 (5%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
Y+E + G+ PT A R +E I I S I+ ++ AY+ + VYFDV S+P Y KL
Sbjct: 98 YYEDADALGIKRPTVAPRATEHIDEIISLIEKIMKNGHAYV-VNGDVYFDVQSYPEYGKL 156
Query: 366 WGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
+ Q K+ P DFALWK+ KPGEP + S WG+GRPGWHIECSAMA
Sbjct: 157 SKQTLEELQSGARVEINPNKKHPLDFALWKAKKPGEPSWPSPWGEGRPGWHIECSAMAIK 216
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
+ G +D+HTGG DL FPHHENE AQ+ A + +V YW+H G+L
Sbjct: 217 YLGETIDIHTGGSDLVFPHHENEIAQAEAATGKP-FVKYWMHNGYL 261
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I IYN +T+TK P + Q K + Y CGPTVYD HIG+A + D RR LE +
Sbjct: 4 ITIYNDLTRTKEPLVTQKKGKVGIYTCGPTVYDYFHIGNARPFIVFDAFRRFLEAQGY-E 62
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TDIDDK+IN+A L +A+++
Sbjct: 63 VTFVQNFTDIDDKMINRAKELGITVPQLAEKF 94
>gi|294791947|ref|ZP_06757095.1| cysteine--tRNA ligase [Veillonella sp. 6_1_27]
gi|294457177|gb|EFG25539.1| cysteine--tRNA ligase [Veillonella sp. 6_1_27]
Length = 482
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 99/171 (57%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY YFE M+ GV RVS I I + IQTL+D AY D VY+ V+ F
Sbjct: 93 RYIDSYFEVMDVLGVQRADIYPRVSTHIDDIIAMIQTLIDKGYAY-ELDGDVYYSVEKFE 151
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
HY +L GR I K++P DFALWK+AK GEP++ES WG GRPGWHIECS
Sbjct: 152 HYGELSGRTLDDMEAGARIEVDGRKKNPMDFALWKAAKHGEPYWESPWGNGRPGWHIECS 211
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM+ + G + D H GG DL FPHHENE AQS Q V YWLH G +
Sbjct: 212 AMSQKYLGTEFDFHGGGSDLIFPHHENEIAQSEGCSGQHPAVRYWLHNGFI 262
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I +YN +T+ K F K Y CG T Y+ PHIG+A V D+IRR ++H +
Sbjct: 4 ITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGY-K 62
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKIIN +N + T+A RY
Sbjct: 63 VTYVQNFTDVDDKIINTSNGEGVSWDTIANRY 94
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPTR----GHAVCNVKLDIIRRILEHYFHIHSIVISSV 173
T K F P+ V G P G+A V D+IRR ++H + + +
Sbjct: 11 TRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGY-KVTYVQNF 69
Query: 174 TDIDDKIINKANSLKEDYKTVAKRY 198
TD+DDKIIN +N + T+A RY
Sbjct: 70 TDVDDKIINTSNGEGVSWDTIANRY 94
>gi|425065810|ref|ZP_18468930.1| Cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
P1059]
gi|404383305|gb|EJZ79759.1| Cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
P1059]
Length = 459
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 100/167 (59%), Gaps = 8/167 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + VL P R + IP I + I+ L+ + AY+ ++ V FDV+SF Y K
Sbjct: 95 EMHKDFDALNVLRPDVEPRATHHIPEIIAMIEKLIARQHAYVSANGDVMFDVESFKEYGK 154
Query: 365 LWGRNENITQHA-------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q VK++P DF LWK +KPGEP + S WG+GRPGWHIECSAM
Sbjct: 155 LSRQNLEQLQAGARVEIVNVKKNPMDFVLWKMSKPGEPSWSSPWGEGRPGWHIECSAMNH 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG DL FPHHENE AQSC H+ ++VNYW+H+G +
Sbjct: 215 KELGEHFDIHGGGSDLTFPHHENEIAQSCCAHS-GRYVNYWIHSGMI 260
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KI+N +T+ K F + N + Y CG TVYD H+GH V D+I R L Y
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 61 LTYVRNITDVDDKIIKRA 78
>gi|254420661|ref|ZP_05034385.1| cysteinyl-tRNA synthetase [Brevundimonas sp. BAL3]
gi|196186838|gb|EDX81814.1| cysteinyl-tRNA synthetase [Brevundimonas sp. BAL3]
Length = 469
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 98/178 (55%), Gaps = 15/178 (8%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RYE Y M V PP A V+++IP I + IQ ++D AY H V FDV S+P
Sbjct: 94 RYEAAYLADMGLLNVSPPDLAPHVTDYIPAIVAQIQAIVDAGCAYAAEGH-VLFDVSSYP 152
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L GRN + K++P DF LWK +KP EP + S WG+GRPGWHIECS
Sbjct: 153 SYGALSGRNLDDMIAGARVEVAPYKKNPHDFVLWKPSKPDEPSWPSPWGEGRPGWHIECS 212
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQ-------WVNYWLHTGHL 464
AM G +D+H GGIDL FPHHENE AQ H +Q + YW+H G L
Sbjct: 213 AMIEQALGLPIDIHGGGIDLVFPHHENEIAQGVCAHGHAQGDKAHDEYARYWMHNGFL 270
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEH-YFHI 90
+ I++ + + K F ++ N + Y CGPTVYD HIG+A V D++ R+L Y
Sbjct: 3 LHIHDTLHREKRLFEPRDPNRVTLYVCGPTVYDYAHIGNARPPVVFDVLVRLLRRTYGAD 62
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
H I +VTD+DDKI KA V RY
Sbjct: 63 HVIYARNVTDVDDKINQKAAREGVPIGEVTARY 95
>gi|197120161|ref|YP_002140588.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
gi|226710842|sp|B5EEK6.1|SYC_GEOBB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|197089521|gb|ACH40792.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
Length = 480
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 103/170 (60%), Gaps = 11/170 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY-IGSDHSVYFDVDSF 359
R+ E+ M + + PT + +E IP I + +QTL+D AY GSD V++ VD F
Sbjct: 92 RFIKEFDNDMARLMLQLPTFQPKATEHIPEIIALVQTLIDKGFAYQSGSD--VFYRVDRF 149
Query: 360 PHYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
Y KL RN Q K P DFALWK AKPGEP++ES WG+GRPGWHIEC
Sbjct: 150 EGYLKLSKRNLEDMQAGARIDVDERKEHPMDFALWKGAKPGEPYWESPWGQGRPGWHIEC 209
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
SAM++ F G +D+H GG DL FPHHENE AQS A + +V YWLH G
Sbjct: 210 SAMSTKFLGETLDIHGGGKDLIFPHHENEIAQSEAASGKP-FVKYWLHNG 258
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+++YN +T +K F+ N + Y CG TVYD HIGHA NV D+I R L +
Sbjct: 3 LRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRHLRSK-GLE 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TDIDDKIIN+AN Y +++R+
Sbjct: 62 VTYVRNYTDIDDKIINRANRDGVPYNEISERF 93
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GHA NV D+I R L + + + TDIDDKIIN+AN Y +++R+
Sbjct: 40 GHARANVVFDMIYRHLRSK-GLEVTYVRNYTDIDDKIINRANRDGVPYNEISERF 93
>gi|335049775|ref|ZP_08542761.1| cysteine--tRNA ligase [Megasphaera sp. UPII 199-6]
gi|333762270|gb|EGL39774.1| cysteine--tRNA ligase [Megasphaera sp. UPII 199-6]
Length = 481
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 96/169 (56%), Gaps = 8/169 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY YF+ M+ V RVSE +P I IQTLLD AY+ + VY+ V+ F
Sbjct: 93 RYIASYFDVMDALHVRHADIYPRVSEHMPEIIQMIQTLLDKGMAYV-VEQDVYYSVEKFV 151
Query: 361 HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR + Q K P DFALWK AK GEP +ES WG+GRPGWHIECS
Sbjct: 152 DYGKLSGRTLDDMQAGARIEVDTRKHHPMDFALWKGAKEGEPSWESPWGQGRPGWHIECS 211
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM+ + G D H GG DL FPHHENE AQS A S V YWLH G
Sbjct: 212 AMSCKYLGKTFDFHGGGSDLIFPHHENEIAQSEACTGVSPMVRYWLHNG 260
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEH--YFHIH 91
+YN +T+ K F+ +K Y CG T Y+ H+G+A V D+I+R LEH Y H
Sbjct: 6 VYNTLTRKKEKFVPLTTGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLEHLGYAVTH 65
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
I + TD+DDKII+ AN + + T+A RY
Sbjct: 66 ---IQNFTDVDDKIIHAANGEQVRWDTIANRYI 95
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPTR----GHAVCNVKLDIIRRILEH--YFHIHSIVIS 171
T K F+PL + V G P G+A V D+I+R LEH Y H I
Sbjct: 11 TRKKEKFVPLTTGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLEHLGYAVTH---IQ 67
Query: 172 SVTDIDDKIINKANSLKEDYKTVAKRYF 199
+ TD+DDKII+ AN + + T+A RY
Sbjct: 68 NFTDVDDKIIHAANGEQVRWDTIANRYI 95
>gi|417850906|ref|ZP_12496721.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
str. Anand1_poultry]
gi|338220217|gb|EGP05763.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. gallicida
str. Anand1_poultry]
Length = 459
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 100/167 (59%), Gaps = 8/167 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + VL P R + IP I + I+ L+ + AY+ ++ V FDV+SF Y K
Sbjct: 95 EMHKDFDALNVLRPDVEPRATHHIPEIIAMIEKLIARQHAYVSANGDVMFDVESFKEYGK 154
Query: 365 LWGRNENITQHA-------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q VK++P DF LWK +KPGEP + S WG+GRPGWHIECSAM
Sbjct: 155 LSRQNLEQLQAGARVEIVNVKKNPMDFVLWKMSKPGEPSWSSPWGEGRPGWHIECSAMNH 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG DL FPHHENE AQSC H+ ++VNYW+H+G +
Sbjct: 215 KELGEHFDIHGGGSDLTFPHHENEIAQSCCAHS-GRYVNYWIHSGMI 260
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KI+N +T+ K F + N + Y CG TVYD H+GH V D+I R L Y
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 61 LTYVRNITDVDDKIIKRA 78
>gi|400288066|ref|ZP_10790098.1| cysteinyl-tRNA ligase [Psychrobacter sp. PAMC 21119]
Length = 486
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 101/166 (60%), Gaps = 9/166 (5%)
Query: 313 FGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENI 372
G +PP + R +++I +Q I+TL+ AY G+ VY+ VDSF Y KL RN +
Sbjct: 113 LGCIPPNQEPRATDYIDEMQDIIETLVAGSYAYAGNKGDVYYAVDSFAGYGKLSKRNLDE 172
Query: 373 TQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVD 425
Q KR+PFDF LWK+AKPGEP + S WG+GRPGWHIECSAM++ G D
Sbjct: 173 MQAGSRVEVENDKRNPFDFVLWKAAKPGEPQWASPWGQGRPGWHIECSAMSTKCLGNTFD 232
Query: 426 LHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
+H GG DL+FPHHENE AQS A ++ W+H G + DG +
Sbjct: 233 IHGGGHDLQFPHHENEIAQSEA-STGCKYARNWMHVGFIN-VDGEK 276
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
G+ Y+ +T +K F + + Y CG T+YD HIGHA V D+I R L +
Sbjct: 11 GLTNYDSLTASKQYFEPLDAGKVGMYVCGMTIYDYCHIGHARIMVAYDVISRWLRQLGYE 70
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNV 150
+ V ++TDIDDKIIN+A E + +R+ + L +G IP
Sbjct: 71 VNYV-RNITDIDDKIINRAAENNEPINELTERFITAMHDDEL---ALGCIPPNQEPRATD 126
Query: 151 KLDIIRRILE 160
+D ++ I+E
Sbjct: 127 YIDEMQDIIE 136
>gi|372489694|ref|YP_005029259.1| cysteinyl-tRNA synthetase [Dechlorosoma suillum PS]
gi|359356247|gb|AEV27418.1| cysteinyl-tRNA synthetase [Dechlorosoma suillum PS]
Length = 476
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 96/168 (57%), Gaps = 8/168 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E GV PT R +E++P + I L AY +D V F V FP Y +L G
Sbjct: 98 EDAAALGVQKPTHEPRATEYVPQMLGLIGQLEANGLAYKAADGDVNFSVRKFPGYGRLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + + K+ P DF LWK AK GEP +ES WG GRPGWHIECSAM+S
Sbjct: 158 KSLDDLRAGERVEVDSAKQDPLDFVLWKHAKAGEPAWESPWGAGRPGWHIECSAMSSDLL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTD 468
G D+H GG DL+FPHHENE AQS H + +VNYW+H G +R D
Sbjct: 218 GKHFDIHGGGQDLQFPHHENEIAQSEGAHGCT-FVNYWMHNGFVRVDD 264
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN I + K F+ +K Y CG TVYD H+GHA V D + R L +
Sbjct: 2 LKIYNTIAREKQEFVPIEAGKVKMYVCGMTVYDFCHLGHARVLVVFDAVYRWLRAS-GLD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TDIDDKII +A E + R+ +
Sbjct: 61 VTYVRNITDIDDKIIRRAVENGETIGQLTDRFIAAM 96
>gi|146292587|ref|YP_001183011.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens CN-32]
gi|166225305|sp|A4Y5H9.1|SYC_SHEPC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|145564277|gb|ABP75212.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens CN-32]
Length = 461
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + +L P R + I I ++ LL AY+ SD V F V S+P Y +
Sbjct: 97 EMHRDFDALNMLRPDFEPRATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGR 156
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L G+N + Q K++P DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 157 LSGQNLDQLQAGARVEVDENKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 216
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ + +VNYW+HTG
Sbjct: 217 KHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHD-TPYVNYWMHTG 260
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN IT+ K F N + Y CG T+YD HIGH V D+I R L Y
Sbjct: 4 LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYL-RYVGYE 62
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
++TD+DDKII +AN E + + +R
Sbjct: 63 VNFQRNITDVDDKIIKRANENNESCEALTER 93
>gi|237808667|ref|YP_002893107.1| cysteinyl-tRNA synthetase [Tolumonas auensis DSM 9187]
gi|259511845|sp|C4LG04.1|SYC_TOLAT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|237500928|gb|ACQ93521.1| cysteinyl-tRNA synthetase [Tolumonas auensis DSM 9187]
Length = 463
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 94/152 (61%), Gaps = 8/152 (5%)
Query: 318 PTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENITQHAV 377
P R ++ I I + +Q+LLD AY+ V F +DSFP Y +L G+N Q
Sbjct: 108 PDIEPRATQHIGEIITLVQSLLDQNYAYVADSGDVLFSIDSFPEYGRLSGQNIEQLQAGA 167
Query: 378 -------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGG 430
KR+P DF LWK +KPGEP ++S WG GRPGWHIECSAM S G D+H GG
Sbjct: 168 RVDVEESKRNPMDFVLWKMSKPGEPMWDSPWGAGRPGWHIECSAMNSKHLGHHFDIHGGG 227
Query: 431 IDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
DL+FPHHENE AQSC H+ + +VN W+H+G
Sbjct: 228 SDLQFPHHENEIAQSCCAHH-TPYVNTWMHSG 258
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVVRYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TD+DDKII +A E + +R
Sbjct: 61 VTFVRNITDVDDKIIKRAAENAESCDALTER 91
>gi|392407156|ref|YP_006443764.1| cysteinyl-tRNA synthetase [Anaerobaculum mobile DSM 13181]
gi|390620292|gb|AFM21439.1| cysteinyl-tRNA synthetase [Anaerobaculum mobile DSM 13181]
Length = 474
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 103/171 (60%), Gaps = 9/171 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ YFE + GV T +E I I + I +++ AY+ + +VYFDV SFP
Sbjct: 92 RFIKAYFEDVTPLGVRHATVHPLATEHIDEIIALISRIMERGHAYV-VEGNVYFDVKSFP 150
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL G+ I A K+ P DF LWK+ KPGEPW++S WG GRPGWHIECS
Sbjct: 151 GYGKLSGQGLEELQAGARIEVDARKKHPLDFVLWKARKPGEPWWDSPWGPGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AMA + G +D+H GG DL FPHHENE AQS A + Q+V YW+H G+L
Sbjct: 211 AMAMKYLGETIDIHGGGSDLIFPHHENEIAQSEAATGK-QFVRYWIHNGYL 260
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
G+ +YN +T+ K FI ++ + +Y CGPTVYD HIG+A V D +RR +EH
Sbjct: 2 GLMLYNDLTRRKDEFIPLHQGKVGFYVCGPTVYDYIHIGNARPFVVFDTLRRYMEHK-GF 60
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + + TDIDDK+INKAN L K +A+R+
Sbjct: 61 EVVYVQNFTDIDDKMINKANELGITVKELAERF 93
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 15/90 (16%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSI---PTR------GHAVCNVKLDIIRRILEHYFHIHSI 168
T K F+PL HQ VG PT G+A V D +RR +EH +
Sbjct: 10 TRRKDEFIPL-----HQGKVGFYVCGPTVYDYIHIGNARPFVVFDTLRRYMEHK-GFEVV 63
Query: 169 VISSVTDIDDKIINKANSLKEDYKTVAKRY 198
+ + TDIDDK+INKAN L K +A+R+
Sbjct: 64 YVQNFTDIDDKMINKANELGITVKELAERF 93
>gi|326383076|ref|ZP_08204765.1| cysteinyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
gi|326198212|gb|EGD55397.1| cysteinyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
Length = 464
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 103/166 (62%), Gaps = 8/166 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E E+ + + GVLPP+ R + FI + ++Q L++ AY SD +VYFDV S P
Sbjct: 93 HEREFTRAYDALGVLPPSAEPRATGFITQMVEYMQRLIERGHAY-SSDGNVYFDVRSLPE 151
Query: 362 YFKLWG-RNENITQHAV----KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
Y L G R E++ Q KR P DF LWK+AKPGEP + + WG GRPGWH+ECSAMA
Sbjct: 152 YGSLSGHRLEDVHQGESAGTGKRDPRDFTLWKAAKPGEPAWPTPWGDGRPGWHLECSAMA 211
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
+ G + D+H GG+DL FPHHENE AQS + + YWLH G
Sbjct: 212 TSLLGAEFDIHCGGMDLIFPHHENEIAQSHGAGD--GFAQYWLHNG 255
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+++Y+ T+ F+ Y CG TV PHIGH + D++RR L+ Y +
Sbjct: 3 LRLYDSATREVRDFVPLRPGTASVYLCGATVQGVPHIGHVRSGIAFDVLRRWLD-YRGLD 61
Query: 92 SIVISSVTDIDDKIINKA 109
+ + +VTDIDDKI+ KA
Sbjct: 62 VLFVRNVTDIDDKILTKA 79
>gi|386313262|ref|YP_006009427.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens 200]
gi|319425887|gb|ADV53961.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens 200]
Length = 459
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + +L P R + I I ++ LL AY+ SD V F V S+P Y +
Sbjct: 95 EMHRDFDALNMLRPDFEPRATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGR 154
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L G+N + Q K++P DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSGQNLDQLQAGARVEVDENKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ + +VNYW+HTG
Sbjct: 215 KHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHD-TPYVNYWMHTG 258
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN IT+ K F N + Y CG T+YD HIGH V D+I R L Y
Sbjct: 2 LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYL-RYVGYE 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
++TD+DDKII +AN E + + +R
Sbjct: 61 VNFQRNITDVDDKIIKRANENNESCEALTER 91
>gi|282601150|ref|ZP_05980914.2| cysteine--tRNA ligase [Subdoligranulum variabile DSM 15176]
gi|282570019|gb|EFB75554.1| cysteine--tRNA ligase [Subdoligranulum variabile DSM 15176]
Length = 464
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 105/192 (54%), Gaps = 14/192 (7%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
++E EY + E V PT R +E I I ++ L+D+ AY+ + VYF V S P
Sbjct: 90 KFEAEYIKDSEGLNVEEPTVRPRATEHIGEIIKIVKDLVDSGHAYVARNGDVYFRVKSDP 149
Query: 361 HYFKLWGRNENITQHA-----------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWH 409
Y KL N + + +K P DFA+WK+AKPGEP++ES WG GRPGWH
Sbjct: 150 GYGKLSHLNLDDLESGNRTLRSQMDDDLKEDPADFAVWKAAKPGEPYWESPWGHGRPGWH 209
Query: 410 IECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQS-CAFHNQSQWVNYWLHTGHLRGTD 468
IECSAMA G +DLH GG DL FPHHENE AQS CA N + YW+H G L +
Sbjct: 210 IECSAMARKHLGNTIDLHAGGQDLIFPHHENEIAQSECA--NGCTFSRYWMHNGFLNINN 267
Query: 469 GTRRLRAARFIT 480
A F T
Sbjct: 268 EKMSKSAGNFFT 279
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++I+N +T+ K F+ Q + + Y CGPTVY+ HIG+A + D +RR LE Y
Sbjct: 1 MQIFNTMTRQKEEFVPQKEGEYRIYVCGPTVYNYIHIGNARPMIVFDTLRRYLE-YCGNK 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+S++TDIDDK+I K + VA+++
Sbjct: 60 VYYVSNITDIDDKLIQKGQQEGISMQEVARKF 91
>gi|336311084|ref|ZP_08566052.1| cysteinyl-tRNA synthetase [Shewanella sp. HN-41]
gi|335865499|gb|EGM70522.1| cysteinyl-tRNA synthetase [Shewanella sp. HN-41]
Length = 459
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + +L P R + I I ++ LL+ AY+ +D V F V S+P Y +
Sbjct: 95 EMHRDFDALNMLRPDFEPRATLHIEEIIDMVERLLERGHAYVAADGDVLFSVASYPDYGR 154
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L G+N + Q K++P DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSGQNLDQLQAGARVEVDENKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ + +VNYW+HTG
Sbjct: 215 KHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHD-TPYVNYWMHTG 258
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN IT+ K F N + Y CG T+YD HIGH V D+I R L Y
Sbjct: 2 LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYL-RYVGYE 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
++TD+DDKII +AN E + + +R
Sbjct: 61 VNFQRNITDVDDKIIKRANENNESCEALTER 91
>gi|386388850|ref|ZP_10073696.1| cysteine--tRNA ligase [Haemophilus paraphrohaemolyticus HK411]
gi|385696993|gb|EIG27453.1| cysteine--tRNA ligase [Haemophilus paraphrohaemolyticus HK411]
Length = 459
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 97/167 (58%), Gaps = 8/167 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R + I I + ++ L+ AY+ +D V FDV+SFP Y
Sbjct: 95 EMHKDFDALNILRPDVEPRATHHISEIIAMVEKLIANGHAYVAADGDVMFDVESFPKYGA 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N + Q +VK++P DF LWK +K EP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSRQNLDQLQAGARVEIKSVKKNPMDFVLWKMSKENEPSWESPWGNGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG DL FPHHENE AQSC N +VNYWLHTG L
Sbjct: 215 KELGEHFDIHGGGSDLMFPHHENEIAQSCC-ANHGNYVNYWLHTGML 260
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN + + K F N N + Y CG TVYD H GH V D+I R L Y +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYL-RYSGYN 60
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 61 LCYVRNITDVDDKIIKRA 78
>gi|296392881|ref|YP_003657765.1| cysteinyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
gi|296180028|gb|ADG96934.1| cysteinyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
Length = 467
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 102/168 (60%), Gaps = 8/168 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E E+ + + GVLPP+ R + I + + I+ L++ AY G+ VYFDV S P
Sbjct: 93 HEREFSNAYNRLGVLPPSAEPRATGHITQMTTCIERLIERGHAYTGAG-DVYFDVRSLPE 151
Query: 362 YFKLWGRN-----ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
Y KL G + + A KR P DF LWK +KPGEPW+ + WG GRPGWH+EC+AMA
Sbjct: 152 YGKLSGHQPDDVHQGESAGAGKRDPRDFTLWKGSKPGEPWWPTPWGPGRPGWHLECTAMA 211
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
+ + G + D+H GG+DL FPHHENE AQ A Q+ +WLH G L
Sbjct: 212 TAYLGSEFDIHCGGMDLVFPHHENELAQ--AHGAGDQFARFWLHNGWL 257
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRR-ILEHYFHI 90
+++Y+ T+ F + Y CG TV PH+GH V D++RR +L F +
Sbjct: 3 LRLYDTRTRVVREFAPLRPGQVSVYLCGATVQGKPHVGHLRSAVVFDVLRRWLLAKGFDV 62
Query: 91 HSIVISSVTDIDDKIINKA 109
+ I +VTDIDDKI+ KA
Sbjct: 63 --LFIRNVTDIDDKILAKA 79
>gi|337284525|ref|YP_004623999.1| cysteinyl-tRNA synthetase [Pyrococcus yayanosii CH1]
gi|334900459|gb|AEH24727.1| cysteinyl-tRNA synthetase [Pyrococcus yayanosii CH1]
Length = 476
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 99/164 (60%), Gaps = 9/164 (5%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ E M V P RV+E + I +FI+ L + AY GSD VYF+V F Y KL
Sbjct: 97 FLEDMAALKVKPADVYPRVTEHVNDIIAFIERLEEKGYAYEGSD-GVYFEVSKFKEYGKL 155
Query: 366 WG-------RNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
G + + K++P DFALWK AKPGEP +ES WG+GRPGWHIECSAM+S
Sbjct: 156 SGIKVEELKKGARVEPGEGKKNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSAMSSK 215
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
+ G D+H GG DL FPHHENE AQS A +WV YWLHTG
Sbjct: 216 YLGESFDIHGGGNDLIFPHHENEIAQSEACFGH-EWVRYWLHTG 258
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I +YN +TK K F K ++ Y CGPTVYD PH+GHA + D+IRR LEH +
Sbjct: 3 IMVYNTLTKRKEEFKPLRKGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHRGYT- 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+++ + TDIDDKII +A ED K +A+++
Sbjct: 62 VLMVMNFTDIDDKIIKRAQETGEDPKELAEKF 93
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 20/141 (14%)
Query: 116 YKTVAKR--YFLPLIFKILHQKVVG----SIPTRGHAVCNVKLDIIRRILEHYFHIHSIV 169
Y T+ KR F PL + V G P GHA + D+IRR LEH + ++
Sbjct: 6 YNTLTKRKEEFKPLRKGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHRGYT-VLM 64
Query: 170 ISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPV 229
+ + TDIDDKII +A ED K +A +K +R D+ KV V
Sbjct: 65 VMNFTDIDDKIIKRAQETGEDPKELA-------------EKFIRVFLEDMAALKVKPADV 111
Query: 230 LTKCDEFRDELLALGVQIKDQ 250
+ E ++++A +++++
Sbjct: 112 YPRVTEHVNDIIAFIERLEEK 132
>gi|120599417|ref|YP_963991.1| cysteinyl-tRNA synthetase [Shewanella sp. W3-18-1]
gi|166225307|sp|A1RL92.1|SYC_SHESW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120559510|gb|ABM25437.1| cysteinyl-tRNA synthetase [Shewanella sp. W3-18-1]
Length = 461
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + +L P R + I I ++ LL AY+ SD V F V S+P Y +
Sbjct: 97 EMHRDFDALNMLRPDFEPRATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGR 156
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L G+N + Q K++P DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 157 LSGQNLDQLQAGARVEVDENKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 216
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ + +VNYW+HTG
Sbjct: 217 KHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHD-TPYVNYWMHTG 260
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN IT+ K F N + Y CG T+YD HIGH V D+I R L Y
Sbjct: 4 LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYL-RYVGYE 62
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
++TD+DDKII +AN E + + +R
Sbjct: 63 VNFQRNITDVDDKIIKRANENNESCEALTER 93
>gi|302039377|ref|YP_003799699.1| cysteinyl-tRNA synthetase [Candidatus Nitrospira defluvii]
gi|300607441|emb|CBK43774.1| Cysteinyl-tRNA synthetase [Candidatus Nitrospira defluvii]
Length = 486
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 98/167 (58%), Gaps = 9/167 (5%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
Y+E MEK GV T R +E I I + TLL AY D VYF VD + Y +L
Sbjct: 96 YYEDMEKLGVRRATLEPRATEHIAEIVRLVDTLLAKGMAYR-VDGDVYFQVDRYAVYGRL 154
Query: 366 WGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
RN + Q KR P DFALWK +KPGEP ++S WG+GRPGWHIECSAMA
Sbjct: 155 SKRNVDDLQAGARVDVDERKRHPMDFALWKGSKPGEPSWDSPWGQGRPGWHIECSAMAMR 214
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG+DL FPHHENE AQSC + ++ YW+H G ++
Sbjct: 215 HLGETFDIHGGGMDLIFPHHENEIAQSCGATGK-EFARYWVHNGFVQ 260
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+++YN ++ +K PF ++ Y CG TVYD HIGHA + D++RR LE+ +
Sbjct: 2 LRLYNTLSGSKEPFEPLVPGKVRMYVCGVTVYDYCHIGHARSALVFDVLRRYLEYSGFVV 61
Query: 92 SIVISSVTDIDDKIINKA 109
+ TD+DDKII +A
Sbjct: 62 EFA-KNFTDVDDKIIKRA 78
>gi|292491058|ref|YP_003526497.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
gi|291579653|gb|ADE14110.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
Length = 484
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 100/175 (57%), Gaps = 8/175 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY E E +LPP R R +E + I + +Q LL+ AY G + +Y+DV F
Sbjct: 91 RYIEALHEDAEGLQILPPDREPRATESMEAIIAMVQRLLEQGYAYQGENGDIYYDVSHFE 150
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L G+ E + K P DF LWK+AKP EP ++S WG GRPGWHIECS
Sbjct: 151 GYGALSGKQLDELRAGERVQVSEAKTDPLDFVLWKAAKPNEPAWDSPWGPGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTD 468
AM++ G D+H GG DL+FPHHENE AQS A ++VNYW+H G +R D
Sbjct: 211 AMSTQALGPHFDIHGGGQDLQFPHHENEIAQSEAATG-CKFVNYWMHNGFVRVDD 264
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHY-FHI 90
++IYN +T+ K F+ ++ Y CG TVYD H+GHA V D++ R L F +
Sbjct: 2 LRIYNSLTRRKEEFVPIEPGKVRMYVCGMTVYDLCHVGHARVMVVFDVVARYLRASGFEV 61
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVG------SIPTRG 144
+ ++TDIDDKII +A+ E+ + + RY + LH+ G R
Sbjct: 62 --TYVRNITDIDDKIIRRAHERGENIQELTARY-----IEALHEDAEGLQILPPDREPRA 114
Query: 145 HAVCNVKLDIIRRILEHYF 163
+ +++R+LE +
Sbjct: 115 TESMEAIIAMVQRLLEQGY 133
>gi|150392183|ref|YP_001322232.1| cysteinyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
gi|187629786|sp|A6TWK5.1|SYC_ALKMQ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|149952045|gb|ABR50573.1| cysteinyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
Length = 464
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 105/172 (61%), Gaps = 11/172 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY-IGSDHSVYFDVDSF 359
R+ +EYF+ GV +V+E +P I +FIQ LL+ AY + D VY+DV F
Sbjct: 90 RFIVEYFKDAATLGVDQADIHPKVTENVPEIIAFIQELLEKNVAYEVNGD--VYYDVSRF 147
Query: 360 PHYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
Y KL +N I + KR+ DF LWK+AKPGEP +ES WG GRPGWHIEC
Sbjct: 148 EDYGKLSKQNLEELQSGARIEVNEAKRNSLDFVLWKTAKPGEPSWESPWGSGRPGWHIEC 207
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
SAMA + G +D+H GG DL FPHHENE AQS A ++ + NYW+H G+L
Sbjct: 208 SAMAKKYLGETIDIHGGGGDLVFPHHENEIAQSEACTGKT-FANYWIHVGYL 258
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+++YN +T+ K F+ + ++ YACGPTVY+ HIG+ + D +R+ L Y
Sbjct: 1 MRLYNTLTRKKEVFVPIEQGKVRMYACGPTVYNYFHIGNGRTFIVFDALRKYL-VYRGYD 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFL 125
+ + TDIDDKII KA K +++R+ +
Sbjct: 60 VTFVQNFTDIDDKIIKKAQEEAVSAKEISERFIV 93
>gi|168998632|ref|YP_001687900.1| hypothetical protein pK2044_00350 [Klebsiella pneumoniae
NTUH-K2044]
gi|386037807|ref|YP_005957513.1| hypothetical protein KPN2242_25621 [Klebsiella pneumoniae KCTC
2242]
gi|424833549|ref|ZP_18258272.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|339764729|gb|AEK00949.1| hypothetical protein KPN2242_25621 [Klebsiella pneumoniae KCTC
2242]
gi|414710937|emb|CCN32585.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
Length = 328
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 95/158 (60%), Gaps = 8/158 (5%)
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRN-- 369
K G+LPP R +E IP I S I+ LL + AYI + V F S Y KL G++
Sbjct: 78 KLGILPPDIEPRPTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKDYGKLSGQDIT 137
Query: 370 -----ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQV 424
I + KR P DF LWK AKPGEP + S WG+GRPGWHIECSAM H+ G
Sbjct: 138 MLRAGTRIEVNEYKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHF 197
Query: 425 DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
D+H GG DL FPHHENE AQS + N +VNYWLHTG
Sbjct: 198 DIHGGGSDLIFPHHENEIAQSTSA-NDGPYVNYWLHTG 234
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIV-ISSVTDIDDKIINKANSLKE 114
Y CG TVYD H+GHA V D+I R L F + + + ++TDIDDKII +A E
Sbjct: 2 YVCGVTVYDLCHLGHARTFVAFDMIVRYLR--FRGYDVTFVRNITDIDDKIIQRARDTGE 59
Query: 115 DYKTVAKR 122
D++++ +R
Sbjct: 60 DWRSLTER 67
>gi|350570254|ref|ZP_08938622.1| cysteine--tRNA ligase [Neisseria wadsworthii 9715]
gi|349797303|gb|EGZ51070.1| cysteine--tRNA ligase [Neisseria wadsworthii 9715]
Length = 469
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 100/182 (54%), Gaps = 19/182 (10%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E GV+ P + +E + + + IQ L+D +AY + VY+ V F Y +L G
Sbjct: 98 EDAAALGVIRPDVEPKATEHVRQMLAMIQRLIDNGKAYPAENGDVYYAVREFSAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AKP EP +ES WG+GRPGWHIECSAM+ F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKPSEPAWESPWGQGRPGWHIECSAMSEELF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS-----------QWVNYWLHTGHLRGTDG 469
G D+H GG DL+FPHHENE AQSC H S V YWLH G +R DG
Sbjct: 218 GDTFDIHGGGADLQFPHHENEIAQSCGAHGGSCGHNHGGKTIESHVKYWLHNGFIR-VDG 276
Query: 470 TR 471
+
Sbjct: 277 EK 278
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ +YN +T+ K F+ N +++ Y CG TVYD H+GHA V DII R L +
Sbjct: 2 LTVYNTLTRQKEQFVPLNPQNVRMYVCGMTVYDYCHLGHARVMVVFDIIARWLRQCGYPL 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ V ++TDIDDKII +A E + R+ +
Sbjct: 62 TYV-RNITDIDDKIIARAAENGETIGELTARFIQAM 96
>gi|290968519|ref|ZP_06560058.1| cysteine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
gi|290781515|gb|EFD94104.1| cysteine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
Length = 481
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 96/169 (56%), Gaps = 8/169 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY YF+ M+ V RVSE +P I IQTLLD AY+ + VY+ V+ F
Sbjct: 93 RYIASYFDVMDALHVRHADIYPRVSEHMPEIIQMIQTLLDKGMAYV-VEQDVYYSVEKFV 151
Query: 361 HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR + Q K P DFALWK AK GEP +ES WG+GRPGWHIECS
Sbjct: 152 DYGKLSGRTLDDMQAGARIEVDTRKHHPMDFALWKGAKEGEPSWESPWGQGRPGWHIECS 211
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM+ + G D H GG DL FPHHENE AQS A S V YWLH G
Sbjct: 212 AMSCKYLGKTFDFHGGGSDLIFPHHENEIAQSEACTGVSPMVRYWLHNG 260
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEH--YFHIH 91
+YN +T+ K F+ +K Y CG T Y+ H+G+A V D+I+R LEH Y H
Sbjct: 6 VYNTLTRKKEKFVPLTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLEHLGYAVTH 65
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
I + TD+DDKII+ AN + + T+A RY
Sbjct: 66 ---IQNFTDVDDKIIHAANGEQVRWDTIANRYI 95
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPTR----GHAVCNVKLDIIRRILEH--YFHIHSIVIS 171
T K F+PL + V G P G+A V D+I+R LEH Y H I
Sbjct: 11 TRKKEKFVPLTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLEHLGYAVTH---IQ 67
Query: 172 SVTDIDDKIINKANSLKEDYKTVAKRYF 199
+ TD+DDKII+ AN + + T+A RY
Sbjct: 68 NFTDVDDKIIHAANGEQVRWDTIANRYI 95
>gi|18977396|ref|NP_578753.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
gi|18893083|gb|AAL81148.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
Length = 483
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 102/164 (62%), Gaps = 9/164 (5%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ E ME V P RV++ I I FI L + AY GSD +YF+V FP Y KL
Sbjct: 102 FLEDMEALKVKPADIYPRVTDHIDDIIEFIGKLKEKGYAYEGSD-GIYFEVKKFPEYGKL 160
Query: 366 WG-RNENITQHAV------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
G + E++ + A K++P DFALWK AKPGEP ++S WG+GRPGWHIECS M+S
Sbjct: 161 SGVKIEDLQKGARVEPGEGKKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSK 220
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
+ G D+H GG DL FPHHENE AQS A +WV YWLHTG
Sbjct: 221 YLGESFDIHGGGNDLIFPHHENEIAQSEACFGH-EWVKYWLHTG 263
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
Query: 24 LPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRI 83
+P G + +K+YN +TK K F + +K Y CGPTVYD PH+GHA + D+IRR
Sbjct: 1 MPRGKNM-LKVYNTLTKQKEEFKPLREGEVKMYVCGPTVYDYPHLGHARTYIAFDVIRRY 59
Query: 84 LEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
LEH + +++ + TDIDDKII +A ED K +A+R+
Sbjct: 60 LEHKGYT-VLMVMNFTDIDDKIIKRARETGEDPKELAERF 98
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 118 TVAKRYFLPLIFKILHQKVVG----SIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSV 173
T K F PL + V G P GHA + D+IRR LEH + +++ +
Sbjct: 15 TKQKEEFKPLREGEVKMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGYT-VLMVMNF 73
Query: 174 TDIDDKIINKANSLKEDYKTVAKRY 198
TDIDDKII +A ED K +A+R+
Sbjct: 74 TDIDDKIIKRARETGEDPKELAERF 98
>gi|77165712|ref|YP_344237.1| cysteine--tRNA ligase [Nitrosococcus oceani ATCC 19707]
gi|254433143|ref|ZP_05046651.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
gi|109894913|sp|Q3J8Y9.1|SYC_NITOC RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|76884026|gb|ABA58707.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
gi|207089476|gb|EDZ66747.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
Length = 485
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 99/175 (56%), Gaps = 8/175 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY E +LPP R R +E + I + ++ LLD AY G + +Y+DV F
Sbjct: 91 RYIQALHEDEASLQILPPDREPRATESMEAILAMVRQLLDQGYAYQGENGDIYYDVSHFE 150
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L GR E + + K P DF LWK+AK GEP +ES WG GRPGWHIECS
Sbjct: 151 GYGALSGRHLEDLRAGERVQVNEAKTDPLDFVLWKAAKSGEPAWESPWGPGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTD 468
AM+ G D+H GG DL+FPHHENE AQS A ++VNYW+H G +R D
Sbjct: 211 AMSIQELGTHFDIHGGGQDLQFPHHENEIAQSEAA-TGGKFVNYWMHNGFVRLND 264
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHY-FHI 90
++IYN +T+ K FI ++ Y CG TVYD H+GHA V D++ R L F +
Sbjct: 2 LRIYNSLTRRKEEFIPIESGKVRMYVCGMTVYDLCHVGHARVMVVFDMVVRYLRASGFEV 61
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
I + ++TDIDDKII++AN E T+ RY L
Sbjct: 62 --IYVRNITDIDDKIIHRANERGESIHTLTARYIQAL 96
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 144 GHAVCNVKLDIIRRILEHY-FHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRL 202
GHA V D++ R L F + I + ++TDIDDKII++AN E T+ RY
Sbjct: 39 GHARVMVVFDMVVRYLRASGFEV--IYVRNITDIDDKIIHRANERGESIHTLTARY---- 92
Query: 203 IFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGK 262
+ LH+ L+ D P + E + +LA+ Q+ DQ +Q ++G
Sbjct: 93 -IQALHED-----EASLQILPPDREP---RATESMEAILAMVRQLLDQGY--AYQGENGD 141
Query: 263 VFSD 266
++ D
Sbjct: 142 IYYD 145
>gi|397651531|ref|YP_006492112.1| cysteinyl-tRNA ligase [Pyrococcus furiosus COM1]
gi|30316338|sp|Q8U227.2|SYC_PYRFU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|393189122|gb|AFN03820.1| cysteinyl-tRNA ligase [Pyrococcus furiosus COM1]
Length = 477
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 102/164 (62%), Gaps = 9/164 (5%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ E ME V P RV++ I I FI L + AY GSD +YF+V FP Y KL
Sbjct: 96 FLEDMEALKVKPADIYPRVTDHIDDIIEFIGKLKEKGYAYEGSD-GIYFEVKKFPEYGKL 154
Query: 366 WG-RNENITQHAV------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
G + E++ + A K++P DFALWK AKPGEP ++S WG+GRPGWHIECS M+S
Sbjct: 155 SGVKIEDLQKGARVEPGEGKKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSK 214
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
+ G D+H GG DL FPHHENE AQS A +WV YWLHTG
Sbjct: 215 YLGESFDIHGGGNDLIFPHHENEIAQSEACFGH-EWVKYWLHTG 257
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +TK K F + +K Y CGPTVYD PH+GHA + D+IRR LEH +
Sbjct: 2 LKVYNTLTKQKEEFKPLREGEVKMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGYT- 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+++ + TDIDDKII +A ED K +A+R+
Sbjct: 61 VLMVMNFTDIDDKIIKRARETGEDPKELAERF 92
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 118 TVAKRYFLPLIFKILHQKVVG----SIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSV 173
T K F PL + V G P GHA + D+IRR LEH + +++ +
Sbjct: 9 TKQKEEFKPLREGEVKMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGYT-VLMVMNF 67
Query: 174 TDIDDKIINKANSLKEDYKTVAKRY 198
TDIDDKII +A ED K +A+R+
Sbjct: 68 TDIDDKIIKRARETGEDPKELAERF 92
>gi|15602810|ref|NP_245882.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. Pm70]
gi|13431884|sp|P57890.1|SYC_PASMU RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|12721267|gb|AAK03029.1| CysS [Pasteurella multocida subsp. multocida str. Pm70]
Length = 459
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 100/167 (59%), Gaps = 8/167 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + VL P R + IP I + I+ L+ + AY+ ++ V FDV+SF Y K
Sbjct: 95 EMHKDFDALNVLRPDVEPRATHHIPEIIAMIEKLIARQHAYVSANGDVMFDVESFKEYGK 154
Query: 365 LWGRNENITQHA-------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q VK++P DF LWK +KPGEP + S WG+GRPGWHIECSAM
Sbjct: 155 LSRQNLEQLQAGARVEIVNVKKNPMDFVLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNH 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG DL FPHHENE AQSC H+ ++VNYW+H+G +
Sbjct: 215 KELGEHFDIHGGGSDLTFPHHENEIAQSCCAHS-GRYVNYWIHSGMI 260
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KI+N +T+ K F + N + Y CG TVYD H+GH V D+I R L Y
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 61 LTYVRNITDVDDKIIKRA 78
>gi|331268391|ref|YP_004394883.1| cysteinyl-tRNA synthetase [Clostridium botulinum BKT015925]
gi|329124941|gb|AEB74886.1| cysteinyl-tRNA synthetase [Clostridium botulinum BKT015925]
Length = 472
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 100/171 (58%), Gaps = 9/171 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ EY++ + + T R +EF+ I +F++ L+D AY D VYF F
Sbjct: 96 RFIEEYYKDSDGLNIKRATVNPRATEFMDEIVAFVKDLIDKGYAY-KVDGDVYFSTKKFT 154
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL G+N IT K+ P DFA+WK+ KPGEP +ES WGKGRPGWHIECS
Sbjct: 155 EYGKLSGQNLEDLQAGARITVDERKQDPMDFAIWKNEKPGEPSWESPWGKGRPGWHIECS 214
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
MA G +D+H GG DL FPHHENE AQS A N + NYW+H+ +L
Sbjct: 215 CMAHKLLGDTIDIHAGGADLVFPHHENEIAQSEA-RNGKAFANYWMHSAYL 264
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K++N +T+ K F + Y CGPTVY+ HIG+ + D IRR E Y
Sbjct: 7 MKLFNTMTRQKEEFKPIKDGEVNMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFE-YKGYK 65
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I + TDIDDK+I KAN K + R+
Sbjct: 66 VNFIQNFTDIDDKMIKKANEENITVKELGDRF 97
>gi|411008777|ref|ZP_11385106.1| cysteinyl-tRNA ligase [Aeromonas aquariorum AAK1]
Length = 458
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 98/159 (61%), Gaps = 8/159 (5%)
Query: 311 EKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRN- 369
+ G++ P R ++ I I +Q+LLD + AY+ + V F VDS+ Y KL G++
Sbjct: 101 DALGMVRPDVEPRATQHIGEIIELVQSLLDKEHAYVADNGDVMFIVDSYADYGKLSGQDL 160
Query: 370 ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQ 423
E + A KR+P DF LWK +KPGEP ++S WG GRPGWHIECSAM S G
Sbjct: 161 EQLQAGARVDVVDAKRNPLDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNH 220
Query: 424 VDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
D+H GG DL+FPHHENE AQSC H +VN W+H+G
Sbjct: 221 FDIHGGGSDLQFPHHENEIAQSCCAHG-GDYVNTWMHSG 258
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 14/140 (10%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYL-RYSGYQ 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVK 151
+ +VTD+DDKII +A + L ++++G + A+ V+
Sbjct: 61 LNYVRNVTDVDDKIIKRAAETG-------------VTCDDLTERLIGDMHADFDALGMVR 107
Query: 152 LDIIRRILEHYFHIHSIVIS 171
D+ R +H I +V S
Sbjct: 108 PDVEPRATQHIGEIIELVQS 127
>gi|117617683|ref|YP_857264.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117559090|gb|ABK36038.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 458
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 98/159 (61%), Gaps = 8/159 (5%)
Query: 311 EKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRN- 369
+ G++ P R ++ I I +Q+LLD + AY+ + V F VDS+ Y KL G++
Sbjct: 101 DALGMVRPDVEPRATQHIGEIIELVQSLLDKEHAYVADNGDVMFIVDSYADYGKLSGQDL 160
Query: 370 ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQ 423
E + A KR+P DF LWK +KPGEP ++S WG GRPGWHIECSAM S G
Sbjct: 161 EQLQAGARVDVVDAKRNPLDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNH 220
Query: 424 VDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
D+H GG DL+FPHHENE AQSC H +VN W+H+G
Sbjct: 221 FDIHGGGSDLQFPHHENEIAQSCCAHG-GDYVNTWMHSG 258
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYL-RYSGYQ 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVK 151
+ +VTD+DDKII +A + L +++G + A+ V+
Sbjct: 61 LNYVRNVTDVDDKIIKRAAETG-------------VTCDDLTARLIGDMHADFDALGMVR 107
Query: 152 LDIIRRILEHYFHIHSIVIS 171
D+ R +H I +V S
Sbjct: 108 PDVEPRATQHIGEIIELVQS 127
>gi|389720629|ref|ZP_10187458.1| cysteinyl-tRNA ligase [Acinetobacter sp. HA]
gi|388609525|gb|EIM38688.1| cysteinyl-tRNA ligase [Acinetobacter sp. HA]
Length = 473
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 102/173 (58%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E K G L P A + +++I +Q+ I TL++ AY ++ VYF+V+ F Y +L G
Sbjct: 100 EDFAKLGCLAPDAAPKATDYIDQMQNMIDTLVNNGTAYPANNGDVYFEVEKFAKYGRLSG 159
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R +E + K+ PFDF LWK AK EP + S WG GRPGWHIECSAM++
Sbjct: 160 RKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A + Q+VNYW+H G + DG +
Sbjct: 220 CLGNHFDIHGGGADLSFPHHENEIAQSEAATGE-QYVNYWMHAGFI-NVDGEK 270
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ + + + Y CG TVYD HIGHA V D IIR + + +
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDLYVCGMTVYDYCHIGHARTVVAFDYIIRFLRSQGWQVK- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ ++TDIDDKII +AN E ++ R+
Sbjct: 65 -YVRNITDIDDKIIKRANENGESISSLTSRF 94
>gi|431929783|ref|YP_007242829.1| cysteinyl-tRNA synthetase [Thioflavicoccus mobilis 8321]
gi|431828086|gb|AGA89199.1| cysteinyl-tRNA synthetase [Thioflavicoccus mobilis 8321]
Length = 465
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 97/168 (57%), Gaps = 8/168 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E GVLPP+ R + I IQ+ + TLL+ AY + VY+ V FP Y KL G
Sbjct: 98 EDAAALGVLPPSDEPRATAHIDEIQAMVATLLERGLAYRADNGDVYYAVGRFPGYGKLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ + KR P DF LWK+AKPGEP +ES WG GRPGWHIECSAM++
Sbjct: 158 KDPQELRAGSRVEIGEAKRDPLDFVLWKAAKPGEPAWESPWGPGRPGWHIECSAMSTCAL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTD 468
G D+H GG DL+FPHHENE AQS + +V W+H G +R D
Sbjct: 218 GAHFDIHGGGADLQFPHHENEIAQSEGATGEP-FVEVWMHNGFVRVND 264
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++IYN +T+ K F ++ Y CG TVYD H+GHA V D++ R L H +
Sbjct: 2 LQIYNSLTRQKAVFTPLVPGQVRMYVCGMTVYDYCHLGHARVMVVFDVVYRYLRHLGY-E 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQ--KVVGSIPTRGHAVCN 149
I ++TDIDDKII +A E + +R+ +H+ +G +P
Sbjct: 61 VTYIRNITDIDDKIIRRAGENDEPIAALTERF-----IAAMHEDAAALGVLPPSDEPRAT 115
Query: 150 VKLDIIRRIL 159
+D I+ ++
Sbjct: 116 AHIDEIQAMV 125
>gi|342218372|ref|ZP_08710986.1| cysteine--tRNA ligase [Megasphaera sp. UPII 135-E]
gi|341589784|gb|EGS33046.1| cysteine--tRNA ligase [Megasphaera sp. UPII 135-E]
Length = 481
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 98/169 (57%), Gaps = 8/169 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY YFE M+ V RVSE + I + IQTL++ AY+ D+ VY+ V+ F
Sbjct: 93 RYIASYFEVMDALHVHRADIYPRVSEHMDAIFTMIQTLINKNIAYV-LDNDVYYSVEKFD 151
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR I + K+ P DFALWK AKPGEP ++S WGKGRPGWHIECS
Sbjct: 152 GYGKLSGRCLDDMMAGARIEVNDKKKHPMDFALWKGAKPGEPAWDSPWGKGRPGWHIECS 211
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM+ + G D H GG DL FPHHENE AQS A V YWLH G
Sbjct: 212 AMSHQYLGNSFDFHGGGSDLIFPHHENEIAQSEACFGHEPMVRYWLHNG 260
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEH--YFHIH 91
+YN +T+ K F Q H+ Y CG T Y+ H+G+A V D+I+R L+H Y H
Sbjct: 6 VYNTLTRKKELFKPQTPGHVNIYVCGITPYNHSHMGNARPFVTWDVIKRYLKHLGYEVTH 65
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKIIN AN + T+A RY
Sbjct: 66 ---VQNFTDVDDKIINAANGEGVSWDTIANRY 94
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 144 GHAVCNVKLDIIRRILEH--YFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
G+A V D+I+R L+H Y H + + TD+DDKIIN AN + T+A RY
Sbjct: 41 GNARPFVTWDVIKRYLKHLGYEVTH---VQNFTDVDDKIINAANGEGVSWDTIANRY 94
>gi|404491639|ref|YP_006715745.1| cysteinyl-tRNA ligase [Pelobacter carbinolicus DSM 2380]
gi|109894916|sp|Q3A8C9.1|SYC_PELCD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|77543801|gb|ABA87363.1| cysteinyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
Length = 481
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 98/162 (60%), Gaps = 9/162 (5%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E M + G+ PT + + I HI + +Q L+D AY S VYF V+ FP Y KL
Sbjct: 99 EDMNRLGLAEPTIQPKATCHIDHIVNLVQRLIDRGIAY-ESQGDVYFSVEDFPSYLKLSK 157
Query: 368 RNEN-------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
RN + IT KR+P DFALWK+AKPGEP +ES WG GRPGWHIECSAM+ +
Sbjct: 158 RNMDEMRSGARITPGEQKRNPMDFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSMEYL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL FPHHENE AQS + +V YWLH G
Sbjct: 218 GESFDIHGGGKDLVFPHHENEIAQSEGATGKP-FVKYWLHNG 258
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+++YN +T K F + Y CG TVYD HIGHA NV DII R L+ +
Sbjct: 3 LRVYNTMTGRKEEFEPLQPGKVGMYVCGVTVYDYCHIGHARANVVFDIIYRYLQ-FIGFD 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVK 151
+ + TD+DDKII +AN T+A F+ + +++ + + A C++
Sbjct: 62 VTYVRNYTDVDDKIIKRANERGISSDTLAGE-FIQAFDEDMNRLGLAEPTIQPKATCHID 120
Query: 152 --LDIIRRILE 160
+++++R+++
Sbjct: 121 HIVNLVQRLID 131
>gi|134045577|ref|YP_001097063.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C5]
gi|132663202|gb|ABO34848.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C5]
Length = 476
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ M V P +V+E IP I +FI+ L++ AY +++ VYF+V F +Y KL
Sbjct: 96 FLNDMATLKVKPADIYPKVTEHIPEIIAFIEKLIEKGFAY-KTENGVYFEVKKFENYGKL 154
Query: 366 WGRNEN-------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
N I K++P DFALWK+AKP EP +ES +G+GRPGWHIECSAM+S
Sbjct: 155 SNINLEDLYSGVRIETSEKKKNPEDFALWKTAKPREPKWESPFGEGRPGWHIECSAMSSK 214
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAARF 478
+ G Q D+H GG DL FPHHENE AQS A+ + WVNYWLHTG + F
Sbjct: 215 YLGKQFDIHGGGRDLSFPHHENEIAQSVAYSGKD-WVNYWLHTGFVMVNGEKMSKSLGNF 273
Query: 479 IT 480
+T
Sbjct: 274 VT 275
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T+ + F + +K Y CGPTVYD H GH V DIIRR LEH +
Sbjct: 2 LKVYNTLTRKEEEFKPLTEKEVKMYVCGPTVYDHTHFGHGRTYVSFDIIRRYLEHIGYTV 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
++VI + TDIDDKII +AN ++ + +++++
Sbjct: 62 NLVI-NFTDIDDKIIKRANEKGKNPQELSEQF 92
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 116 YKTVAKRY--FLPLIFKILHQKVVGSIPTR------GHAVCNVKLDIIRRILEHYFHIHS 167
Y T+ ++ F PL K + V G PT GH V DIIRR LEH + +
Sbjct: 5 YNTLTRKEEEFKPLTEKEVKMYVCG--PTVYDHTHFGHGRTYVSFDIIRRYLEHIGYTVN 62
Query: 168 IVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
+VI + TDIDDKII +AN ++ + +++++
Sbjct: 63 LVI-NFTDIDDKIIKRANEKGKNPQELSEQF 92
>gi|381196562|ref|ZP_09903904.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii WJ10621]
Length = 473
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 101/173 (58%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E E G L P A R +++I +QS I L++ AY ++ VYF V+ F Y +L G
Sbjct: 100 EDAENLGCLHPDEAPRATDYIDQMQSMIGNLVEKGTAYPSANGDVYFQVEKFAKYGRLSG 159
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R +E + K+ PFDF LWK AK EP + S WGKGRPGWHIECSAM++
Sbjct: 160 RKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPAWASPWGKGRPGWHIECSAMSTC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A + Q+VNYW+H G + DG +
Sbjct: 220 CLGNHFDIHGGGSDLMFPHHENEIAQSEASTGE-QYVNYWMHVGFI-NVDGEK 270
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ + + H+ Y CG TVYD HIGHA V D IIR + + +
Sbjct: 6 LYNSEQRKKVEFVPRVEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWSVK- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TDIDDKII +AN E + R+ +
Sbjct: 65 -YVRNITDIDDKIIKRANENGESITQLTDRFIQAM 98
>gi|294650979|ref|ZP_06728319.1| cysteine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
gi|292823080|gb|EFF81943.1| cysteine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
Length = 473
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 101/173 (58%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E G + P A + +E+I +Q+ I TL++ AY S+ VYF+V F Y +L G
Sbjct: 100 EDAANLGCVAPDEAPKATEYIDQMQNMISTLVNKGAAYPASNGDVYFEVSKFEKYGRLSG 159
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R +E + K+ PFDF LWK AK EP + S WGKGRPGWHIECSAM++
Sbjct: 160 RKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPAWASPWGKGRPGWHIECSAMSTC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A + Q+VNYW+H G + DG +
Sbjct: 220 CLGNHFDIHGGGSDLMFPHHENEIAQSEATTGE-QYVNYWMHVGFI-NVDGEK 270
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ +N+ + Y CG TVYD HIGHA V D IIR + + +
Sbjct: 6 LYNSEQRKKVEFVPRNEGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVR- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I ++TDIDDKII +AN E + + R+
Sbjct: 65 -YIRNITDIDDKIIARANENGESIQQLTARF 94
>gi|258512691|ref|YP_003186125.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479417|gb|ACV59736.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 474
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/173 (49%), Positives = 100/173 (57%), Gaps = 12/173 (6%)
Query: 299 NFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS 358
N RY YFE K + P T RV+E + I FIQ L+D AY + SVYFD S
Sbjct: 93 NIRY---YFEDAGKLFIRPATVHPRVTECVDEIIRFIQDLIDRGHAY-ERNGSVYFDTSS 148
Query: 359 FPHYFKLWGRNEN-------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIE 411
FP Y KL ++ I K P DFALWK+AKPGE W+ S WG GRPGWHIE
Sbjct: 149 FPEYGKLSHQSPEDMRAGYRIEVQDEKDDPTDFALWKAAKPGEEWWPSPWGPGRPGWHIE 208
Query: 412 CSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
CS M + G Q+D+H GG DL FPHHENE AQS A H+ + YWLH G L
Sbjct: 209 CSVMNYLYLGEQIDIHAGGRDLIFPHHENEIAQSEA-HSGKTFARYWLHNGTL 260
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
GI +YN +T K P +++YACGPTVY H+G+A V D IRR LE Y
Sbjct: 2 GILLYNSLTGKKEPLQTLEPGKVRFYACGPTVYHFFHLGNARMFVVFDTIRRYLE-YRGY 60
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAK---RYFL 125
+ + TDIDD+II +A L + +A+ RY+
Sbjct: 61 EVRFVQNFTDIDDRIIQRAQELGISPRELAEENIRYYF 98
>gi|260768877|ref|ZP_05877811.1| cysteinyl-tRNA synthetase [Vibrio furnissii CIP 102972]
gi|375131397|ref|YP_004993497.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS) [Vibrio
furnissii NCTC 11218]
gi|260616907|gb|EEX42092.1| cysteinyl-tRNA synthetase [Vibrio furnissii CIP 102972]
gi|315180571|gb|ADT87485.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS) [Vibrio
furnissii NCTC 11218]
Length = 460
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R + +I I +Q L+D AY+ + V F+V+ F Y K
Sbjct: 95 EMYADFDALNIKRPDVEPRATAYIQEIIELVQRLIDRGFAYVADNGDVMFEVNKFDDYGK 154
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ + Q KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSKQDLDQLQAGARVDIDMAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 215 SILGNHFDIHGGGSDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNSLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLI--FKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +A +E +++ +R + F L+ K P R A
Sbjct: 61 LTFVRNITDIDDKIIKRAAENQESCESLTERLIQEMYADFDALNIKRPDVEP-RATAYIQ 119
Query: 150 VKLDIIRRILEH---YFHIHSIVISSVTDIDD 178
+++++R+++ Y + V+ V DD
Sbjct: 120 EIIELVQRLIDRGFAYVADNGDVMFEVNKFDD 151
>gi|383309904|ref|YP_005362714.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. HN06]
gi|380871176|gb|AFF23543.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. HN06]
Length = 459
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 99/167 (59%), Gaps = 8/167 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + VL P R + IP I + I+ L+ + AY+ ++ V FDV+SF Y K
Sbjct: 95 EMHRDFDALNVLRPDVEPRATHHIPEIIAMIEKLIARQHAYVSANGDVMFDVESFKEYGK 154
Query: 365 LWGRNENITQHA-------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q VK++P DF LWK +KPGEP + S WG+GRPGWHIECSAM
Sbjct: 155 LSRQNLEQLQAGARVEIVNVKKNPMDFVLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNH 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG DL FPHHENE AQSC H+ ++VNYW+H+G +
Sbjct: 215 KELGEHFDIHGGGSDLTFPHHENEIAQSCCAHS-GRYVNYWIHSGMI 260
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KI+N +T+ K F + N + Y CG TVYD H+GH V D+I R L Y
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 61 LTYVRNITDVDDKIIKRA 78
>gi|296138339|ref|YP_003645582.1| cysteinyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
gi|296026473|gb|ADG77243.1| cysteinyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
Length = 465
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 101/166 (60%), Gaps = 8/166 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E E+ + + GVLPP+ R + FI + ++++ +++ AY S VYF V S P
Sbjct: 93 HEREFTRAYDALGVLPPSAEPRATGFITQMVTYMERMIERGHAY-ASAGDVYFSVRSLPD 151
Query: 362 YFKLWGRNENITQH-----AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
Y L + + Q A KR P DF LWK+AKPGEP + S WG GRPGWH+ECSAMA
Sbjct: 152 YGALSRQKVDDVQQGETLAAGKRDPLDFTLWKAAKPGEPSWPSPWGDGRPGWHLECSAMA 211
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
+ + GGQ D+H GG+DL FPHHENE AQ A + NYWLH G
Sbjct: 212 TSYLGGQFDIHCGGMDLVFPHHENEIAQ--AHGAGDPFANYWLHNG 255
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+++Y+ +T+ F+ + Y CG TV PHIGH V D++RR L +
Sbjct: 3 LRLYDSLTREVRDFVPLVEGKAGIYLCGATVQGVPHIGHIRSGVAFDVLRRWL-LATGLD 61
Query: 92 SIVISSVTDIDDKIINKA 109
+ +VTDIDDKI+ KA
Sbjct: 62 VAFVRNVTDIDDKILRKA 79
>gi|406676594|ref|ZP_11083780.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC35]
gi|404626817|gb|EKB23627.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC35]
Length = 458
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 96/159 (60%), Gaps = 8/159 (5%)
Query: 311 EKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNE 370
+ G++ P R ++ I I +Q+LLD + AY+ + V F V+S+ Y KL G++
Sbjct: 101 DALGMVRPDIEPRATQHIEEIIELVQSLLDKEHAYVADNGDVMFIVESYADYGKLSGQDL 160
Query: 371 NITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQ 423
Q KR+P DF LWK +KPGEP +ES WG GRPGWHIECSAM S G
Sbjct: 161 EQLQAGARVDVVDAKRNPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNH 220
Query: 424 VDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
D+H GG DL+FPHHENE AQSC H +VN W+H+G
Sbjct: 221 FDIHGGGSDLQFPHHENEIAQSCCAHG-GDYVNTWMHSG 258
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 14/140 (10%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYL-RYAGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVK 151
+ ++TD+DDKII +A + + L ++++G + A+ V+
Sbjct: 61 LTYVRNITDVDDKIIKRAAETR-------------VTCDELTERLIGDMHADFDALGMVR 107
Query: 152 LDIIRRILEHYFHIHSIVIS 171
DI R +H I +V S
Sbjct: 108 PDIEPRATQHIEEIIELVQS 127
>gi|262369707|ref|ZP_06063035.1| cysteinyl-tRNA synthetase [Acinetobacter johnsonii SH046]
gi|262315775|gb|EEY96814.1| cysteinyl-tRNA synthetase [Acinetobacter johnsonii SH046]
Length = 473
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 101/173 (58%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E E G L P A R +++I +QS I L++ AY ++ VYF V+ F Y +L G
Sbjct: 100 EDAENLGCLHPDEAPRATDYIDQMQSMIGNLVEKGTAYPSANGDVYFQVEKFAKYGRLSG 159
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R +E + K+ PFDF LWK AK EP + S WGKGRPGWHIECSAM++
Sbjct: 160 RKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKDNEPAWASPWGKGRPGWHIECSAMSTC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A + Q+VNYW+H G + DG +
Sbjct: 220 CLGNHFDIHGGGSDLMFPHHENEIAQSEASTGE-QYVNYWMHVGFI-NVDGEK 270
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ + + H+ Y CG TVYD HIGHA V D IIR + + +
Sbjct: 6 LYNSEQRKKVEFVPRVEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWSVK- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TDIDDKII +AN E + R+ +
Sbjct: 65 -YVRNITDIDDKIIKRANENGESITQLTDRFIQAM 98
>gi|363419540|ref|ZP_09307640.1| cysteinyl-tRNA synthetase [Rhodococcus pyridinivorans AK37]
gi|359737015|gb|EHK85950.1| cysteinyl-tRNA synthetase [Rhodococcus pyridinivorans AK37]
Length = 464
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 101/166 (60%), Gaps = 8/166 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE + + + GVLPP+ R + I + IQ L+D AY +D VYFDV S+P
Sbjct: 93 YERAFNRAYDALGVLPPSVEPRATGHITQMVELIQRLIDAGHAY-AADGDVYFDVLSYPE 151
Query: 362 YFKLWG-RNENITQHAV----KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
Y L G R E++ Q KR P DF LWK+ KPGEP + + WG+GRPGWH+ECSAMA
Sbjct: 152 YGALSGHRIEDVHQGESAGLGKRDPRDFTLWKAEKPGEPSWPTPWGRGRPGWHLECSAMA 211
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
+ GG D+H GG+DL FPHHENE AQS A + + YWLH G
Sbjct: 212 GFYLGGTFDIHCGGMDLVFPHHENEMAQSRAAGD--GFARYWLHNG 255
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+++Y+ ++ F Y CG TV PHIGH V D++RR L +
Sbjct: 3 LRLYDTESRAVRDFEPLVPGQASVYLCGATVQGEPHIGHVRSGVAFDVLRRWLATK-SLD 61
Query: 92 SIVISSVTDIDDKIINKA 109
+ + +VTDI+DKI+ KA
Sbjct: 62 VLFVRNVTDIEDKILRKA 79
>gi|386833900|ref|YP_006239214.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. 3480]
gi|385200600|gb|AFI45455.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. 3480]
Length = 435
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 99/165 (60%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + VL P R + IP I + I+ L+ + AY+ ++ V FDV+SF Y K
Sbjct: 71 EMHKDFDALNVLRPDVEPRATHHIPEIIAMIEKLIARQHAYVSANGDVMFDVESFKEYGK 130
Query: 365 LWGRNENITQHA-------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q VK++P DF LWK +KPGEP + S WG+GRPGWHIECSAM
Sbjct: 131 LSRQNLEQLQAGARVEIVNVKKNPMDFVLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNH 190
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL FPHHENE AQSC H+ ++VNYW+H+G
Sbjct: 191 KELGEHFDIHGGGSDLTFPHHENEIAQSCCAHS-GRYVNYWIHSG 234
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
Y TVYD H+GH V D+I R L Y + ++TD+DDKII +A
Sbjct: 2 YVLRITVYDLCHVGHGRTFVCFDVIARYL-RYLGYDLTYVRNITDVDDKIIKRA 54
>gi|423197293|ref|ZP_17183876.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila SSU]
gi|404630981|gb|EKB27617.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila SSU]
Length = 458
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 96/159 (60%), Gaps = 8/159 (5%)
Query: 311 EKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNE 370
+ G++ P R ++ I I +Q+LLD + AY+ + V F VDS+ Y KL G++
Sbjct: 101 DALGMVRPDVEPRATQHIGEIIELVQSLLDKEHAYVADNGDVMFIVDSYADYGKLSGQDL 160
Query: 371 NITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQ 423
Q KR+P DF LWK +KPGEP ++S WG GRPGWHIECSAM S G
Sbjct: 161 EQLQAGARVDVVDAKRNPLDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNH 220
Query: 424 VDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
D+H GG DL+FPHHENE AQSC H +VN W+H+G
Sbjct: 221 FDIHGGGSDLQFPHHENEIAQSCCAHG-GDYVNTWMHSG 258
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 14/140 (10%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYL-RYSGYQ 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVK 151
+ +VTD+DDKII +A + L ++++G + A+ V+
Sbjct: 61 LNYVRNVTDVDDKIIKRAAETG-------------VTCDDLTERLIGDMHADFDALGMVR 107
Query: 152 LDIIRRILEHYFHIHSIVIS 171
D+ R +H I +V S
Sbjct: 108 PDVEPRATQHIGEIIELVQS 127
>gi|423202014|ref|ZP_17188593.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER39]
gi|404615625|gb|EKB12587.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER39]
Length = 458
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 96/159 (60%), Gaps = 8/159 (5%)
Query: 311 EKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNE 370
+ G++ P R ++ I I +Q+LLD + AY+ + V F V+S+ Y KL G++
Sbjct: 101 DALGMVRPDIEPRATQHIEEIIELVQSLLDKEHAYVADNGDVMFIVESYADYGKLSGQDL 160
Query: 371 NITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQ 423
Q KR+P DF LWK +KPGEP +ES WG GRPGWHIECSAM S G
Sbjct: 161 EQLQAGARVDVVDAKRNPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNH 220
Query: 424 VDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
D+H GG DL+FPHHENE AQSC H +VN W+H+G
Sbjct: 221 FDIHGGGSDLQFPHHENEIAQSCCAHG-GDYVNTWMHSG 258
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 14/140 (10%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYL-RYAGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVK 151
+ ++TD+DDKII +A + + L ++++G + A+ V+
Sbjct: 61 LTYVRNITDVDDKIIKRAAETR-------------VTCDELTERLIGDMHADFDALGMVR 107
Query: 152 LDIIRRILEHYFHIHSIVIS 171
DI R +H I +V S
Sbjct: 108 PDIEPRATQHIEEIIELVQS 127
>gi|91793850|ref|YP_563501.1| cysteinyl-tRNA synthetase [Shewanella denitrificans OS217]
gi|123356646|sp|Q12L98.1|SYC_SHEDO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91715852|gb|ABE55778.1| cysteinyl-tRNA synthetase [Shewanella denitrificans OS217]
Length = 459
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 98/169 (57%), Gaps = 8/169 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R E + + ++ P + + +P I +Q LLD AY+ D V F V S+
Sbjct: 91 RLTAEMHKDFDALNMVRPDFEPKATLHMPEIIEMVQRLLDRGHAYVAPDGDVLFSVASYK 150
Query: 361 HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L G+N + Q K++P DF LWK +KPGEP +ES WG GRPGWHIECS
Sbjct: 151 EYGRLSGQNIDQLQAGARVEIDHNKQNPMDFVLWKMSKPGEPTWESPWGAGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM G D+H GG DL+FPHHENE AQSC H+ + +VNYW+HTG
Sbjct: 211 AMNGKHLGTHFDIHGGGSDLQFPHHENEIAQSCCAHD-TPYVNYWMHTG 258
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +++ K F + Y CG T+YD HIGH V D+I R L Y
Sbjct: 2 LKIYNSMSREKQEFKPITPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYL-RYLGYE 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
++TD+DDKII +A E + +R
Sbjct: 61 VNFQRNITDVDDKIIKRAAENNESCDALTER 91
>gi|6318288|gb|AAF06821.1|AF065890_2 cysteinyl-tRNA synthetase [Thermoproteus tenax Kra 1]
Length = 484
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 99/171 (57%), Gaps = 7/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY EYF+ ME+ V P RV+E++ + +I+ L+D AY+ D SVYF+V P
Sbjct: 100 RYIREYFDVMERLYVKPAYAYPRVTEYVGDMLEWIRALVDRGYAYVAPDGSVYFEVGKVP 159
Query: 361 HYFKLWG-RNENITQHAV------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y + G R E + A KR+P DFALWKS PGEPW+ S W GRPGWH+EC
Sbjct: 160 RYGEFSGQRIEELVAGARVEPEPGKRNPLDFALWKSWSPGEPWWNSPWCPGRPGWHLECV 219
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
M++ G D H GG DL FPHHENE A + A H + YW+H G+L
Sbjct: 220 VMSTKHLGVPFDFHGGGADLIFPHHENEIAIARAMHGVDYFARYWIHVGYL 270
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++IYN +K PF + + Y CG T YDS H+GH V DI+RR LEH +
Sbjct: 6 LRIYNTASKRVEPFSVLTPGVARGYVCGITPYDSVHVGHGRVYVFFDILRRYLEH-LGLE 64
Query: 92 SIVISSVTDIDDKIINKANS 111
++ + TD+DDKIIN+A
Sbjct: 65 VKLVINFTDVDDKIINRARE 84
>gi|352683061|ref|YP_004893585.1| Cysteinyl-tRNA synthetase [Thermoproteus tenax Kra 1]
gi|350275860|emb|CCC82507.1| Cysteinyl-tRNA synthetase [Thermoproteus tenax Kra 1]
Length = 484
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 99/171 (57%), Gaps = 7/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY EYF+ ME+ V P RV+E++ + +I+ L+D AY+ D SVYF+V P
Sbjct: 100 RYIREYFDVMERLYVKPAYAYPRVTEYVGDMLEWIRALVDRGYAYVAPDGSVYFEVGKVP 159
Query: 361 HYFKLWG-RNENITQHAV------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y + G R E + A KR+P DFALWKS PGEPW+ S W GRPGWH+EC
Sbjct: 160 RYGEFSGQRIEELVAGARVEPEPGKRNPLDFALWKSWSPGEPWWNSPWCPGRPGWHLECV 219
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
M++ G D H GG DL FPHHENE A + A H + YW+H G+L
Sbjct: 220 VMSTKHLGVPFDFHGGGADLIFPHHENEIAIARAMHGVDYFARYWIHVGYL 270
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++IYN +K PF + + Y CG T YDS H+GH V DI+RR LEH +
Sbjct: 6 LRIYNTASKRVEPFSVLTPGVARGYVCGITPYDSVHVGHGRVYVFFDILRRYLEH-LGLE 64
Query: 92 SIVISSVTDIDDKIINKANS 111
++ + TD+DDKIIN+A
Sbjct: 65 VKLVINFTDVDDKIINRARE 84
>gi|226951456|ref|ZP_03821920.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
gi|226837804|gb|EEH70187.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
Length = 473
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 101/173 (58%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E G + P A + +E+I +Q+ I TL++ AY S+ VYF+V F Y +L G
Sbjct: 100 EDAADLGCVAPDEAPKATEYIDQMQNMISTLVNKGAAYPASNGDVYFEVSKFEKYGRLSG 159
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R +E + K+ PFDF LWK AK EP + S WGKGRPGWHIECSAM++
Sbjct: 160 RKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPAWASPWGKGRPGWHIECSAMSTC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A + Q+VNYW+H G + DG +
Sbjct: 220 CLGNHFDIHGGGSDLMFPHHENEIAQSEATTGE-QYVNYWMHVGFI-NVDGEK 270
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ +N+ + Y CG TVYD HIGHA V D IIR + + +
Sbjct: 6 LYNSEQRKKVEFVPRNEGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVR- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I ++TDIDDKII +AN E + + R+
Sbjct: 65 -YIRNITDIDDKIIARANENGESIQQLTARF 94
>gi|417548036|ref|ZP_12199117.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
gi|417566287|ref|ZP_12217161.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|395558043|gb|EJG24044.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC143]
gi|400388335|gb|EJP51407.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-18]
Length = 477
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 106/182 (58%), Gaps = 10/182 (5%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + G L P + ++ I IQ IQTL++ K AY ++ +YF ++S+P Y +L G
Sbjct: 100 EDFQTLGCLSPDAEPKATDSIQDIQRIIQTLIEKKYAYQIANGDIYFSIESYPDYGRLSG 159
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R ++ ++ K PFDF LWK++KP EP+++S WG GRPGWHIECSAM+
Sbjct: 160 RKLADMQAGASQRVSLETEKHHPFDFVLWKASKPNEPFWQSPWGNGRPGWHIECSAMSMC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAARF 478
G D+H GG DL FPHHENE AQS A + ++VNYWLHTG + F
Sbjct: 220 HLGNHFDIHGGGGDLIFPHHENEIAQSEAATGE-KYVNYWLHTGFINVNGEKMSKSLGNF 278
Query: 479 IT 480
+T
Sbjct: 279 LT 280
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 30 TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
+ + +YN T++K F N +K Y CG TVYD HIGHA + D+I R L
Sbjct: 2 SDLYVYNAETRSKEHFEPIVANEIKLYVCGITVYDYCHIGHARTMIAFDLIVRFLRSQ-G 60
Query: 90 IHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQ--KVVGSIPTRGHAV 147
I ++TDIDDKII+KA E + R+ + +H+ + +G +
Sbjct: 61 WKVKYIRNITDIDDKIIHKAQDNHESIGELTDRF-----IQAMHEDFQTLGCLSPDAEPK 115
Query: 148 CNVKLDIIRRILE 160
+ I+RI++
Sbjct: 116 ATDSIQDIQRIIQ 128
>gi|227496370|ref|ZP_03926660.1| cysteine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
gi|226834097|gb|EEH66480.1| cysteine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
Length = 496
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 104/177 (58%), Gaps = 18/177 (10%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+E E+ + GV PPT R + +P + IQ LLD AY+G +VYFDV S P
Sbjct: 101 RFEREFDAAYRALGVTPPTYEPRATGHVPQMIDLIQRLLDAGHAYVGEAGNVYFDVRSLP 160
Query: 361 HYFKLWGR-------NENITQ-----HAVKRSPFDFALWKSAKPGEPW---YESAWGKGR 405
Y L + E+ +Q A KR P DFALWK AKPGEP +++ WG+GR
Sbjct: 161 DYGSLTNQRVDDLATTEDESQLDEDVEADKRDPRDFALWKKAKPGEPADAAWDTPWGRGR 220
Query: 406 PGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQS--CAFHNQSQWV-NYWL 459
PGWH+ECSAM+ + G D+H GGIDL+FPHHENE+AQS + +WV N W+
Sbjct: 221 PGWHLECSAMSRRYLGESFDIHGGGIDLRFPHHENEQAQSHGAGWGFARRWVHNAWV 277
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 28 YDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHY 87
YD+ + P+ T P + Y CG TV SPHIGH + D++RR LE
Sbjct: 12 YDSAARAVVPLAPTVTPGTVAI------YLCGATVQGSPHIGHMRSGIAFDVLRRWLERC 65
Query: 88 FHIHSIVISSVTDIDDKIINKANS 111
H +++ +VTDIDDKI+ K+ +
Sbjct: 66 GQ-HVLLVRNVTDIDDKILAKSAA 88
>gi|149191898|ref|ZP_01870131.1| cysteinyl-tRNA synthetase [Vibrio shilonii AK1]
gi|148834246|gb|EDL51250.1| cysteinyl-tRNA synthetase [Vibrio shilonii AK1]
Length = 460
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 94/152 (61%), Gaps = 8/152 (5%)
Query: 318 PTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENITQ--- 374
P R +EFI I ++ L+D AY+ + V F+V F Y KL ++ + Q
Sbjct: 108 PDVEPRATEFIAEIIELVEKLIDRGFAYVADNGDVMFEVSKFDKYGKLSKQDLDQLQAGA 167
Query: 375 ----HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGG 430
+ KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S G D+H GG
Sbjct: 168 RVDVESAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGG 227
Query: 431 IDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 228 SDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYL-RYVGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL--IFKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +AN E +++ +R + F L+ K P +
Sbjct: 61 LKFVRNITDIDDKIIKRANENGESCESLTERLIGEMHADFDALNMKRPDVEPRATEFIAE 120
Query: 150 VKLDIIRRILEHYF 163
+ ++++ ++++ F
Sbjct: 121 I-IELVEKLIDRGF 133
>gi|418006034|ref|ZP_12646003.1| cysteinyl-tRNA synthetase [Lactobacillus casei UW1]
gi|410545054|gb|EKQ19362.1| cysteinyl-tRNA synthetase [Lactobacillus casei UW1]
Length = 444
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 107/188 (56%), Gaps = 15/188 (7%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ E G+ P T R S+ IP I F+Q L+D + AY D VY+ F HY +L
Sbjct: 72 FMEDTTALGIEPATAHPRASQMIPDIIEFVQDLIDKEYAY-AVDGDVYYRARKFKHYGEL 130
Query: 366 WGRN-----ENITQH------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
+N E +QH A K P DFALWK+AKPGE +ES WGKGRPGWHIECS
Sbjct: 131 SHQNVDELEEGASQHITQDELAKKEDPIDFALWKAAKPGEISWESPWGKGRPGWHIECSV 190
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR-GTDGTRRL 473
M++ G D+H GG DL+FPHHENE AQS A Q+V YW+H G + G D +
Sbjct: 191 MSTKLLGDTFDIHGGGQDLEFPHHENEIAQSEA-KTDKQFVRYWMHNGFVTIGEDDEKMS 249
Query: 474 RA-ARFIT 480
++ FIT
Sbjct: 250 KSLGNFIT 257
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKED 115
Y CGPTVY+ HIG+A + D IRR E Y +S+ TD+DDKIIN A+ E
Sbjct: 2 YVCGPTVYNYIHIGNARSAIAFDTIRRYFE-YRGYKVTYVSNFTDVDDKIINAAHKTGEA 60
Query: 116 YKTVAKRY 123
+A+R+
Sbjct: 61 PLDLAQRF 68
>gi|336316096|ref|ZP_08570998.1| cysteinyl-tRNA synthetase [Rheinheimera sp. A13L]
gi|335879586|gb|EGM77483.1| cysteinyl-tRNA synthetase [Rheinheimera sp. A13L]
Length = 459
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 101/172 (58%), Gaps = 8/172 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY + + + G++P RV+ + I I+TL+ AYI SD V FDV +
Sbjct: 91 RYTVAMHDDFKALGLMPADIEPRVTTHMAEIIELIETLVAKGYAYIASDGDVLFDVSKYE 150
Query: 361 HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L +N ++ Q K P DF LWK AKP EP + S WG+GRPGWHIECS
Sbjct: 151 AYGQLSQQNLDMLQSGARVEIDQAKDDPLDFVLWKMAKPNEPSWSSPWGEGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
AM++ G D+H GG DL+FPHHENE AQSC H+ + +VN W+HTG ++
Sbjct: 211 AMSAKHLGKHFDIHGGGSDLQFPHHENEIAQSCCAHD-TPYVNTWIHTGMVQ 261
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++I+N +T+ K F+ + Y CG T+YD H+GHA V D++ R L F +
Sbjct: 2 LQIFNTLTRKKESFVPLVPGKVSMYVCGITIYDFCHVGHARTYVAFDVMNRYLR--FSGY 59
Query: 92 SIV-ISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ + ++TD+DDKII +AN E + RY + +
Sbjct: 60 DVTYVRNITDVDDKIIKRANENGESCDALTARYTVAM 96
>gi|410615541|ref|ZP_11326560.1| cysteinyl-tRNA synthetase [Glaciecola psychrophila 170]
gi|410164954|dbj|GAC40449.1| cysteinyl-tRNA synthetase [Glaciecola psychrophila 170]
Length = 459
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 97/166 (58%), Gaps = 10/166 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E G+L P RV+ IP I + IQ L+D AY V F+V ++ Y +L G
Sbjct: 98 EDFAAIGLLEPDVEPRVTTHIPEIINVIQRLIDKGYAYQADSGDVLFEVSTYADYGRL-G 156
Query: 368 RNE--------NITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHF 419
R + + A KR P DF LWKS KPGEP++ES WG GRPGWHIECSAM
Sbjct: 157 RQDLDQLNSGSRVAVAAEKRDPLDFVLWKSVKPGEPFWESPWGNGRPGWHIECSAMNHKH 216
Query: 420 FGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL FPHHENE AQSC + + +VNYW+HTG ++
Sbjct: 217 LGEHFDIHGGGSDLTFPHHENEVAQSCCAFD-TPYVNYWMHTGMVQ 261
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ IYN +T+ K F + Y CG TVYD H+GHA + D++ R + +
Sbjct: 2 LHIYNTLTRQKEQFKPLQAGKVGLYVCGITVYDVCHVGHARTYLSFDLMVRYMRSR-GLE 60
Query: 92 SIVISSVTDIDDKIINKANS 111
+ ++TD+DDKII++AN
Sbjct: 61 VKYVRNITDVDDKIISRANE 80
>gi|425744739|ref|ZP_18862794.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-323]
gi|425490335|gb|EKU56635.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-323]
Length = 473
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 99/173 (57%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E G P A + +E+I +QS I TL+D AY S+ VYF+V F Y +L G
Sbjct: 100 EDAANLGCAAPDEAPKATEYIDQMQSMINTLVDKGAAYPSSNGDVYFEVSKFDKYGRLSG 159
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R +E + K+ PFDF LWK AK EP + S WG GRPGWHIECSAM++
Sbjct: 160 RKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPAWASPWGNGRPGWHIECSAMSTC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A + Q+VNYW+H G + DG +
Sbjct: 220 CLGNHFDIHGGGSDLMFPHHENEIAQSEASTGE-QYVNYWMHVGFI-NVDGEK 270
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ + + + Y CG TVYD HIGHA V D IIR + + +
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVR- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I ++TDIDDKII +AN E + + R+
Sbjct: 65 -YIRNITDIDDKIIARANENGESIQQLTARF 94
>gi|260772517|ref|ZP_05881433.1| cysteinyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
gi|260611656|gb|EEX36859.1| cysteinyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
Length = 397
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 99/167 (59%), Gaps = 12/167 (7%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R + +I I + ++ L+D AY+ + V F+V F Y +
Sbjct: 32 EMYTDFDALNILRPDVEPRATAYIEEIIALVERLIDRGFAYVADNGDVMFEVSKFKEYGR 91
Query: 365 LWGRNENITQ---------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAM 415
L +++TQ KRSP DF LWK +KPGEP ++S WG GRPGWHIECSAM
Sbjct: 92 L--SKQDLTQLQAGARVDIETAKRSPLDFVLWKMSKPGEPTWQSPWGPGRPGWHIECSAM 149
Query: 416 ASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
S G D+H GG DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 150 NSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 195
>gi|110289208|gb|AAP54161.2| tRNA synthetase class I family protein, putative, expressed [Oryza
sativa Japonica Group]
Length = 491
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 105/165 (63%), Gaps = 8/165 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E+ M + LPPT RV++ I I I ++D +AY + VYF VD+FP
Sbjct: 111 RFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDLITKIMDNGKAYT-IEGDVYFSVDNFP 169
Query: 361 HYFKLWGR--NEN-----ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L GR ++N + A KR+P DFALWKSAK GEP +ES WG+GRPGWHIECS
Sbjct: 170 DYLSLSGRKVDQNRPGTRVAVDARKRNPADFALWKSAKEGEPSWESPWGRGRPGWHIECS 229
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYW 458
AM++H+ G D+H GG DL FPHHENE AQS A + +S+ ++ +
Sbjct: 230 AMSAHYLGNIFDIHGGGKDLIFPHHENELAQSQAAYPESEIISLY 274
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 18 ESPKWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKL 77
E P+ P+ +++++ TK VPF + + + Y CG T YD H+GHA V
Sbjct: 11 EEPRGKRPAAE---LRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAF 67
Query: 78 DIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
D++ R L+ Y + + TDIDDKII +AN ED +++ R+
Sbjct: 68 DVLFRYLK-YLGYEVNYVRNFTDIDDKIIKRANEAGEDALSLSSRFI 113
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 23/159 (14%)
Query: 115 DYKTVAKRYFLPLIFKILHQKVVGSIPTR----GHAVCNVKLDIIRRILEHYFHIHSIVI 170
D +T A F P + + V G P GHA V D++ R L+ Y +
Sbjct: 26 DTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLK-YLGYEVNYV 84
Query: 171 SSVTDIDDKIINKANSLKEDYKTVAKRY---FLRLIFKI-----LHQKVVRK---LAIDL 219
+ TDIDDKII +AN ED +++ R+ F R ++++ H+ V K IDL
Sbjct: 85 RNFTDIDDKIIKRANEAGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDL 144
Query: 220 KKAKVDSGPVLT-------KCDEFRDELLALGVQIKDQK 251
+D+G T D F D L G ++ +
Sbjct: 145 ITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNR 183
>gi|418010688|ref|ZP_12650459.1| cysteinyl-tRNA synthetase [Lactobacillus casei Lc-10]
gi|410553267|gb|EKQ27270.1| cysteinyl-tRNA synthetase [Lactobacillus casei Lc-10]
Length = 444
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 107/188 (56%), Gaps = 15/188 (7%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ E G+ P T R S+ IP I F+Q L+D + AY D VY+ F HY +L
Sbjct: 72 FMEDTTALGIEPATAHPRASQMIPDIIEFVQDLIDKEYAY-AVDGDVYYRARKFKHYGEL 130
Query: 366 WGRN-----ENITQH------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
+N E +QH A K P DFALWK+AKPGE +ES WGKGRPGWHIECS
Sbjct: 131 SHQNVDELEEGASQHITQDELAKKEDPIDFALWKAAKPGEISWESPWGKGRPGWHIECSV 190
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR-GTDGTRRL 473
M++ G D+H GG DL+FPHHENE AQS A Q+V YW+H G + G D +
Sbjct: 191 MSTKLLGDTFDIHGGGQDLEFPHHENEIAQSEA-KTDKQFVRYWMHNGFVTIGEDDEKMS 249
Query: 474 RA-ARFIT 480
++ FIT
Sbjct: 250 KSLGNFIT 257
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKED 115
Y CGPTVY+ HIG+A + D IRR E Y +S+ TD+DDKIIN A+ E
Sbjct: 2 YVCGPTVYNYIHIGNARSAIAFDTIRRYFE-YRGYKVTYVSNFTDVDDKIINAAHKTGEA 60
Query: 116 YKTVAKRY 123
+A+R+
Sbjct: 61 PLDLAQRF 68
>gi|384136752|ref|YP_005519466.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339290837|gb|AEJ44947.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 487
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/173 (49%), Positives = 100/173 (57%), Gaps = 12/173 (6%)
Query: 299 NFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS 358
N RY YFE K + P T RV+E + I FIQ L+D AY + SVYFD S
Sbjct: 106 NIRY---YFEDAGKLFIRPATVHPRVTECVDEIIRFIQDLIDRGHAY-ERNGSVYFDTSS 161
Query: 359 FPHYFKLWGRNEN-------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIE 411
FP Y KL ++ I K P DFALWK+AKPGE W+ S WG GRPGWHIE
Sbjct: 162 FPEYGKLSHQSPEDMRAGYRIEVQDEKDDPTDFALWKAAKPGEEWWPSPWGPGRPGWHIE 221
Query: 412 CSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
CS M + G Q+D+H GG DL FPHHENE AQS A H+ + YWLH G L
Sbjct: 222 CSVMNYLYLGEQIDIHAGGRDLIFPHHENEIAQSEA-HSGKTFARYWLHNGTL 273
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 21 KWSLPSGYD-TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDI 79
+ S+ G D I +YN +T K P +++YACGPTVY H+G+A V D
Sbjct: 4 RQSIRGGEDRVAIVLYNSLTGKKEPLQTLEPGKVRFYACGPTVYHFFHLGNARMFVVFDT 63
Query: 80 IRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAK---RYFL 125
IRR LE Y + + TDIDD+II +A L + +A+ RY+
Sbjct: 64 IRRYLE-YRGYEVRFVQNFTDIDDRIIQRAQELGVSPRELAEENIRYYF 111
>gi|116495760|ref|YP_807494.1| cysteinyl-tRNA synthetase [Lactobacillus casei ATCC 334]
gi|301067316|ref|YP_003789339.1| cysteinyl-tRNA synthetase [Lactobacillus casei str. Zhang]
gi|417981527|ref|ZP_12622192.1| cysteinyl-tRNA synthetase [Lactobacillus casei 12A]
gi|417984346|ref|ZP_12624969.1| cysteinyl-tRNA synthetase [Lactobacillus casei 21/1]
gi|417987611|ref|ZP_12628166.1| cysteinyl-tRNA synthetase [Lactobacillus casei 32G]
gi|417997102|ref|ZP_12637369.1| cysteinyl-tRNA synthetase [Lactobacillus casei M36]
gi|417999942|ref|ZP_12640146.1| cysteinyl-tRNA synthetase [Lactobacillus casei T71499]
gi|418013998|ref|ZP_12653617.1| cysteinyl-tRNA synthetase [Lactobacillus casei Lpc-37]
gi|116105910|gb|ABJ71052.1| cysteinyl-tRNA synthetase [Lactobacillus casei ATCC 334]
gi|300439723|gb|ADK19489.1| Cysteinyl-tRNA synthetase [Lactobacillus casei str. Zhang]
gi|410521666|gb|EKP96624.1| cysteinyl-tRNA synthetase [Lactobacillus casei 12A]
gi|410522931|gb|EKP97869.1| cysteinyl-tRNA synthetase [Lactobacillus casei 32G]
gi|410525712|gb|EKQ00610.1| cysteinyl-tRNA synthetase [Lactobacillus casei 21/1]
gi|410533808|gb|EKQ08474.1| cysteinyl-tRNA synthetase [Lactobacillus casei M36]
gi|410538177|gb|EKQ12734.1| cysteinyl-tRNA synthetase [Lactobacillus casei T71499]
gi|410555089|gb|EKQ29052.1| cysteinyl-tRNA synthetase [Lactobacillus casei Lpc-37]
Length = 444
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 107/188 (56%), Gaps = 15/188 (7%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ E G+ P T R S+ IP I F+Q L+D + AY D VY+ F HY +L
Sbjct: 72 FMEDTTALGIEPATAHPRASQMIPDIIEFVQDLIDKEYAY-AVDGDVYYRARKFKHYGEL 130
Query: 366 WGRN-----ENITQH------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
+N E +QH A K P DFALWK+AKPGE +ES WGKGRPGWHIECS
Sbjct: 131 SHQNVDELEEGASQHITQDELAKKEDPIDFALWKAAKPGEISWESPWGKGRPGWHIECSV 190
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR-GTDGTRRL 473
M++ G D+H GG DL+FPHHENE AQS A Q+V YW+H G + G D +
Sbjct: 191 MSTKLLGDTFDIHGGGQDLEFPHHENEIAQSEA-KTDKQFVRYWMHNGFVTIGEDDEKMS 249
Query: 474 RA-ARFIT 480
++ FIT
Sbjct: 250 KSLGNFIT 257
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKED 115
Y CGPTVY+ HIG+A + D IRR E Y +S+ TD+DDKIIN A+ E
Sbjct: 2 YVCGPTVYNYIHIGNARSAIAFDTIRRYFE-YRGYKVTYVSNFTDVDDKIINAAHKTGEA 60
Query: 116 YKTVAKRY 123
+A+R+
Sbjct: 61 PLDLAQRF 68
>gi|449685295|ref|XP_002168960.2| PREDICTED: cysteine--tRNA ligase, cytoplasmic-like [Hydra
magnipapillata]
Length = 514
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 116/191 (60%), Gaps = 23/191 (12%)
Query: 310 MEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP-----HYFK 364
M+ + P TRVS++IP I ++I+ +++ Y+ + SVYFD F Y K
Sbjct: 1 MKSLNIRPADIITRVSQYIPEIVAYIERIIENGFGYV-CNGSVYFDTIKFGSSENHKYAK 59
Query: 365 L----------WGRNE-NITQ--HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIE 411
L E +++Q K+S DFALWK++K GEP++ S WG GRPGWHIE
Sbjct: 60 LVPEAVGDLAALAEGEGDLSQLNPGAKKSDRDFALWKASKVGEPYWPSPWGNGRPGWHIE 119
Query: 412 CSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDG 469
CSAMAS G +D+HTGG+DLKFPHH+NE AQ+ A +N +QW+NY+LH GHL G
Sbjct: 120 CSAMASDILGNSIDIHTGGVDLKFPHHDNEIAQAEAHYNCTQWINYFLHAGHLTIEGCKM 179
Query: 470 TRRLRAARFIT 480
++ L+ F+T
Sbjct: 180 SKSLK--NFVT 188
>gi|297816954|ref|XP_002876360.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322198|gb|EFH52619.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 107/172 (62%), Gaps = 11/172 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY-IGSDHSVYFDVDSF 359
R+ EY M L PTR RVS+ + HI I+ +++ Y +G D V+F VD
Sbjct: 93 RFCEEYLLDMTALQCLIPTRQPRVSDHMEHIIKMIEKIIENGCGYAVGGD--VFFSVDKS 150
Query: 360 PHYFKLWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
P Y +L G+ + TQ + KR+P DFALW +AK GEP +ES WG GRPGWHIEC
Sbjct: 151 PSYGQLSGQRLDHTQAGKRVAVDSRKRNPADFALWNAAKSGEPSWESPWGPGRPGWHIEC 210
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
SAM++H+ + D+H GG DLKFPHHENE AQ+CA S VNYWLH GH+
Sbjct: 211 SAMSAHYLSPRFDIHGGGADLKFPHHENEIAQTCAACEDS-GVNYWLHNGHV 261
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHY-FHI 90
+ +YN +T+ K F N + Y CG T YD HIGHA V D++ R L H + +
Sbjct: 8 LTLYNTMTQLKEVFKPINPGKIGMYVCGITAYDYSHIGHARAAVSFDLLYRYLRHLGYEV 67
Query: 91 HSIVISSVTDIDDK 104
H + + TD+DDK
Sbjct: 68 H--YVRNFTDVDDK 79
>gi|191639246|ref|YP_001988412.1| cysteinyl-tRNA synthetase [Lactobacillus casei BL23]
gi|239630171|ref|ZP_04673202.1| cysteinyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|385820999|ref|YP_005857386.1| cysteinyl-tRNA synthetase [Lactobacillus casei LC2W]
gi|385824182|ref|YP_005860524.1| cysteinyl-tRNA synthetase [Lactobacillus casei BD-II]
gi|409998108|ref|YP_006752509.1| cysteinyl-tRNA synthetase [Lactobacillus casei W56]
gi|187631657|sp|Q035S0.2|SYC_LACC3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558712|sp|B3WA35.1|SYC_LACCB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|190713548|emb|CAQ67554.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Lactobacillus casei BL23]
gi|239527783|gb|EEQ66784.1| cysteinyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|327383326|gb|AEA54802.1| Cysteinyl-tRNA synthetase [Lactobacillus casei LC2W]
gi|327386509|gb|AEA57983.1| Cysteinyl-tRNA synthetase [Lactobacillus casei BD-II]
gi|406359120|emb|CCK23390.1| Cysteine--tRNA ligase [Lactobacillus casei W56]
Length = 468
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 107/188 (56%), Gaps = 15/188 (7%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ E G+ P T R S+ IP I F+Q L+D + AY D VY+ F HY +L
Sbjct: 96 FMEDTTALGIEPATAHPRASQMIPDIIEFVQDLIDKEYAY-AVDGDVYYRARKFKHYGEL 154
Query: 366 WGRN-----ENITQH------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
+N E +QH A K P DFALWK+AKPGE +ES WGKGRPGWHIECS
Sbjct: 155 SHQNVDELEEGASQHITQDELAKKEDPIDFALWKAAKPGEISWESPWGKGRPGWHIECSV 214
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR-GTDGTRRL 473
M++ G D+H GG DL+FPHHENE AQS A Q+V YW+H G + G D +
Sbjct: 215 MSTKLLGDTFDIHGGGQDLEFPHHENEIAQSEA-KTDKQFVRYWMHNGFVTIGEDDEKMS 273
Query: 474 RA-ARFIT 480
++ FIT
Sbjct: 274 KSLGNFIT 281
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ +YN +++ K F + ++ Y CGPTVY+ HIG+A + D IRR E Y
Sbjct: 2 LTLYNTMSRKKETFTPLHPGEIRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFE-YRGYK 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+S+ TD+DDKIIN A+ E +A+R+
Sbjct: 61 VTYVSNFTDVDDKIINAAHKTGEAPLDLAQRF 92
>gi|344940190|ref|ZP_08779478.1| cysteinyl-tRNA synthetase [Methylobacter tundripaludum SV96]
gi|344261382|gb|EGW21653.1| cysteinyl-tRNA synthetase [Methylobacter tundripaludum SV96]
Length = 492
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 102/180 (56%), Gaps = 8/180 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E VLPP R ++ I I S I+TL+D AY+GS+ V++ V F Y +L G
Sbjct: 128 EDERALAVLPPDLEPRATQSIADIISMIKTLVDKDLAYVGSNGDVFYAVTKFKDYGRLSG 187
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+N E + KR+P DF LWK AK EP ++S WG GRPGWHIECSAM++
Sbjct: 188 KNLDDLQAGERVDVDLAKRNPMDFVLWKMAKANEPAWDSPWGLGRPGWHIECSAMSTCCL 247
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAARFIT 480
G D+H GG+DL+FPHHENE AQS + ++VN W+H G +R D F T
Sbjct: 248 GNHFDIHGGGMDLQFPHHENEIAQSEGATGE-KFVNVWMHNGFVRVDDEKMSKSLGNFFT 306
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 21 KWSLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDII 80
K L ++ +KIYN +T+ K PF + + Y CG TVYD HIGHA V D +
Sbjct: 21 KRCLTELFNDMLKIYNTLTRKKEPFQPRVAGKVGMYVCGMTVYDYCHIGHARVMVVFDTV 80
Query: 81 RRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
R H + + ++TDIDDKII +A EDY + +R+
Sbjct: 81 ARYFRHQGY-ELTYVRNITDIDDKIIQRAIENGEDYGKLTERFI 123
>gi|83644974|ref|YP_433409.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
gi|109894904|sp|Q2SK40.1|SYC_HAHCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|83633017|gb|ABC28984.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
Length = 467
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E GVL PT R + I I + IQ L+D AY S+ VY+ V+ F Y KL
Sbjct: 98 EDERALGVLSPTSEPRATGHIDEIIAMIQRLMDKGYAYHASNGDVYYSVEQFADYGKLSK 157
Query: 368 R-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+ I A KRSP DF LWK+AKPGE ++S WG+GRPGWHIECSAM++
Sbjct: 158 QKLDEIRAGARIEVDAEKRSPADFVLWKAAKPGELSWDSPWGEGRPGWHIECSAMSTRCL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DLKFPHHENE AQS A ++VNYW+H G +R
Sbjct: 218 GDTFDIHGGGPDLKFPHHENEIAQSEA-ATGCKYVNYWMHAGAVR 261
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIY+ +++ K F + Y CG TVYD H+GHA V DII R L +
Sbjct: 2 LKIYSSLSQQKEEFKPIQAGKVGIYVCGMTVYDYCHLGHARVLVCFDIITRYLRAKGYDV 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
+ V ++TD+DDKI+N+A E + R+
Sbjct: 62 NYV-RNITDVDDKILNRARDNGESVDALTARFI 93
>gi|417990633|ref|ZP_12631103.1| cysteinyl-tRNA synthetase [Lactobacillus casei A2-362]
gi|417993946|ref|ZP_12634282.1| cysteinyl-tRNA synthetase [Lactobacillus casei CRF28]
gi|410530855|gb|EKQ05618.1| cysteinyl-tRNA synthetase [Lactobacillus casei CRF28]
gi|410534337|gb|EKQ08991.1| cysteinyl-tRNA synthetase [Lactobacillus casei A2-362]
Length = 444
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 109/193 (56%), Gaps = 15/193 (7%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ + E G+ P T R S+ IP I F+Q L+D + AY D VY+ F
Sbjct: 67 RFIDAFMEDTTALGIEPATAHPRASQMIPDIIDFVQDLIDKEYAY-AVDGDVYYRARKFK 125
Query: 361 HYFKLWGRN-----ENITQH------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWH 409
HY +L +N E +QH A K P DFALWK+AKPGE +ES WGKGRPGWH
Sbjct: 126 HYGELSHQNVDELEEGASQHITQDELAKKEDPIDFALWKAAKPGEISWESPWGKGRPGWH 185
Query: 410 IECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR-GTD 468
IECS M++ G D+H GG DL+FPHHENE AQS A Q+V YW+H G + G D
Sbjct: 186 IECSVMSTKLLGDTFDIHGGGQDLEFPHHENEIAQSEA-KTDKQFVRYWMHNGFVTIGED 244
Query: 469 GTRRLRA-ARFIT 480
+ ++ FIT
Sbjct: 245 DEKMSKSLGNFIT 257
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKED 115
Y CGPTVY+ HIG+A + D IRR E Y +S+ TD+DDKIIN A+ E
Sbjct: 2 YVCGPTVYNYIHIGNARSAIAFDTIRRYFE-YRGYKVTYVSNFTDVDDKIINAAHKTGEA 60
Query: 116 YKTVAKRY 123
+A+R+
Sbjct: 61 PLDLAQRF 68
>gi|257126844|ref|YP_003164958.1| cysteinyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
gi|257050783|gb|ACV39967.1| cysteinyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
Length = 483
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 102/170 (60%), Gaps = 15/170 (8%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+FE + K +L + +V+E + + IQ L+D AY D VYF+V + Y KL
Sbjct: 95 FFEDISKLNILESVKRPKVTENMSEVIEIIQKLIDNGFAY-EKDGDVYFEVKKYKDYGKL 153
Query: 366 WGRNENITQ---------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
N+ I + +K++P DFALWK K GEP++ES WG+GRPGWHIECSAMA
Sbjct: 154 --SNQKIEELELGARIDVSEIKKNPVDFALWKKKKDGEPFWESPWGQGRPGWHIECSAMA 211
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQS-CAFHNQSQWVNYWLHTGHLR 465
+ G D+H GG DL FPHHENE AQS CA+H + NYWLH G ++
Sbjct: 212 KKYLGDTFDIHGGGQDLVFPHHENEIAQSKCAYH--GNFANYWLHNGFIQ 259
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T F +N +K Y CGPTVY+ H+G+A V D + R EH +
Sbjct: 1 MKLYNTMTNKIEEFKTIEENKVKMYVCGPTVYNYIHLGNARPIVVFDTLARYFEHK-GME 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSI--PTRGHAVCN 149
+ + TD+DDKIINK+ V+++Y I ++ S+ P +
Sbjct: 60 VEFVQNFTDVDDKIINKSMEEGTSASEVSEKYIKYFFEDISKLNILESVKRPKVTENMSE 119
Query: 150 VKLDIIRRILEHYF 163
V ++II++++++ F
Sbjct: 120 V-IEIIQKLIDNGF 132
>gi|419765672|ref|ZP_14291901.1| hypothetical protein UUU_25010 [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397741410|gb|EJK88639.1| hypothetical protein UUU_25010 [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 471
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 94/158 (59%), Gaps = 8/158 (5%)
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRN-- 369
K G+LPP R +E IP I S I+ LL + AYI + V F S Y KL G++
Sbjct: 113 KLGILPPNIEPRPTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDIT 172
Query: 370 -----ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQV 424
I + KR P DF LWK AKPGEP + S WG+GRPGWHIECSAM + G
Sbjct: 173 MLRAGTRIEVNEYKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCRYLGTHF 232
Query: 425 DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
D+H GG DL FPHHENE AQS + N +VNYWLHTG
Sbjct: 233 DIHGGGSDLIFPHHENEIAQSTS-ANVGPYVNYWLHTG 269
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
IK+ N + K + ++ + Y CG TVYD H+GHA V D+I R L F +
Sbjct: 13 IKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLR--FRGY 70
Query: 92 SIV-ISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ + ++TDIDDKII +A ED++++ +R
Sbjct: 71 DVTFVRNITDIDDKIIQRARDTGEDWRSLTER 102
>gi|117921105|ref|YP_870297.1| cysteinyl-tRNA synthetase [Shewanella sp. ANA-3]
gi|166225306|sp|A0KYM2.1|SYC_SHESA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|117613437|gb|ABK48891.1| cysteinyl-tRNA synthetase [Shewanella sp. ANA-3]
Length = 461
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + ++ P R + I I ++ LL AY+ +D V F V SFP Y +
Sbjct: 97 EMHKDFDALNMIRPDFEPRATLHIAEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGR 156
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L G+N Q K++P DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 157 LSGQNLEQLQAGARVEVDDNKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 216
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ + +VNYW+HTG
Sbjct: 217 KHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHD-TPYVNYWMHTG 260
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN IT+ K F + Y CG TVYD HIGH V D+I R L Y
Sbjct: 4 LKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYL-RYAGYE 62
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
++TDIDDKII +AN +ED T+ R
Sbjct: 63 VNFQRNITDIDDKIIKRANENQEDCNTLTDR 93
>gi|227533678|ref|ZP_03963727.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase) [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|227188662|gb|EEI68729.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase) [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
Length = 461
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 107/188 (56%), Gaps = 15/188 (7%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ E G+ P T R S+ IP I F+Q L+D + AY D VY+ F HY +L
Sbjct: 89 FMEDTTALGIEPATAHPRASQMIPDIIDFVQDLIDKEYAY-AVDGDVYYRARKFKHYGEL 147
Query: 366 WGRN-----ENITQH------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
+N E +QH A K P DFALWK+AKPGE +ES WGKGRPGWHIECS
Sbjct: 148 SHQNVDELEEGASQHITQDELAKKEDPIDFALWKAAKPGEISWESPWGKGRPGWHIECSV 207
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR-GTDGTRRL 473
M++ G D+H GG DL+FPHHENE AQS A Q+V YW+H G + G D +
Sbjct: 208 MSTKLLGDTFDIHGGGQDLEFPHHENEIAQSEA-KTDKQFVRYWMHNGFVTIGEDDEKMS 266
Query: 474 RA-ARFIT 480
++ FIT
Sbjct: 267 KSLGNFIT 274
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 38 ITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISS 97
+++ K F + ++ Y CGPTVY+ HIG+A + D IRR E Y +S+
Sbjct: 1 MSRKKETFTPLHPGEIRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFE-YRGYKVTYVSN 59
Query: 98 VTDIDDKIINKANSLKEDYKTVAKRY 123
TD+DDKIIN A+ E +A+R+
Sbjct: 60 FTDVDDKIINAAHKTGEAPLDLAQRF 85
>gi|323494384|ref|ZP_08099494.1| cysteinyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
gi|323311367|gb|EGA64521.1| cysteinyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
Length = 460
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 95/152 (62%), Gaps = 8/152 (5%)
Query: 318 PTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENITQ--- 374
P R +EFI I ++ L++ AY+ S+ V F+V F Y KL ++ + Q
Sbjct: 108 PDVEPRATEFITEIIELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGA 167
Query: 375 ----HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGG 430
+ KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S G D+H GG
Sbjct: 168 RVDVDSAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGG 227
Query: 431 IDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 228 SDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F N + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL--IFKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +AN E ++ +R + F L+ K P +
Sbjct: 61 LTFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITE 120
Query: 150 VKLDIIRRILEHYF 163
+ ++++ +++E F
Sbjct: 121 I-IELVEKLIERGF 133
>gi|93005831|ref|YP_580268.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
gi|109894926|sp|Q1QC19.1|SYC_PSYCK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|92393509|gb|ABE74784.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
Length = 488
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 101/178 (56%), Gaps = 9/178 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E G L P R ++ I +Q I+TL+ AY G + VY+ VDSF
Sbjct: 103 RFITAMHEDATALGCLSPDAEPRATDHIDEMQQMIETLVSNDYAYAGDNGDVYYAVDSFA 162
Query: 361 HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL RN + Q KR+PFDF LWK+AKP EP + SAWG+GRPGWHIECS
Sbjct: 163 DYGKLSKRNLDDMQAGSRVEVENDKRNPFDFVLWKAAKPDEPQWASAWGQGRPGWHIECS 222
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
AM++ G D+H GG DL+FPHHENE AQS A ++ W+H G + DG +
Sbjct: 223 AMSTKCLGNTFDIHGGGHDLQFPHHENEIAQSEA-ATGCEYARNWMHVGFIN-VDGEK 278
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IY+ +T K F + Y CG TVYD HIGHA V D+ R L + +
Sbjct: 16 IYDSLTGRKQAFKPLATGKVGMYVCGMTVYDYCHIGHARVMVGFDMAVRWLAQLGYDVNY 75
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E+ T+ +R+ +
Sbjct: 76 V-RNITDIDDKIITRAAENGEEIGTLTQRFITAM 108
>gi|218290036|ref|ZP_03494203.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
gi|218239870|gb|EED07058.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
Length = 474
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/173 (49%), Positives = 100/173 (57%), Gaps = 12/173 (6%)
Query: 299 NFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDS 358
N RY YFE K + P T RV+E + I FIQ L+D AY + SVYFD S
Sbjct: 93 NIRY---YFEDAGKLFIRPATVHPRVTECVDDIIRFIQDLIDRGHAY-ERNGSVYFDTSS 148
Query: 359 FPHYFKLWGRNEN-------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIE 411
FP Y KL ++ I K P DFALWK+AKPGE W+ S WG GRPGWHIE
Sbjct: 149 FPEYGKLSHQSPEDMRAGYRIEVQDEKDDPTDFALWKAAKPGEEWWPSPWGPGRPGWHIE 208
Query: 412 CSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
CS M + G Q+D+H GG DL FPHHENE AQS A H+ + YWLH G L
Sbjct: 209 CSVMNYLYLGEQIDIHAGGRDLIFPHHENEIAQSEA-HSGKTFARYWLHNGTL 260
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
GI +YN +T K P +++YACGPTVY H+G+A V D IRR LE Y
Sbjct: 2 GIVLYNSLTGKKEPLQTLEPGKVRFYACGPTVYHFFHLGNARMFVVFDTIRRYLE-YRGY 60
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAK---RYFL 125
+ + + TDIDD+II +A L + +A+ RY+
Sbjct: 61 EVLFVQNFTDIDDRIIQRAQELGISPRELAEENIRYYF 98
>gi|389852533|ref|YP_006354767.1| cysteinyl-tRNA synthetase [Pyrococcus sp. ST04]
gi|388249839|gb|AFK22692.1| cysteinyl-tRNA synthetase [Pyrococcus sp. ST04]
Length = 451
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ E M V P RV+E I I FI+ L++ AY GSD VYF+V F Y KL
Sbjct: 72 FLEDMRALKVKPADIYPRVTEHIEDIIRFIEKLIEKGYAYEGSD-GVYFEVQKFSEYGKL 130
Query: 366 WG-------RNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
G + + K++P DFALWK AKPGEP +ES WG GRPGWHIECS M+S
Sbjct: 131 SGIKIEELRKGARVEPGEGKKNPEDFALWKKAKPGEPKWESPWGDGRPGWHIECSVMSSK 190
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
+ G D+H GG DL FPHHENE AQS A +WV YWLHTG
Sbjct: 191 YLGESFDIHGGGNDLIFPHHENEIAQSEACFGH-EWVRYWLHTG 233
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKED 115
Y CGPTVYD PH+GHA + D+IRR LEH + +++ + TDIDDKII +AN ED
Sbjct: 2 YVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGYT-VLMVMNFTDIDDKIIRRANETGED 60
Query: 116 YKTVAKRY 123
K +A+++
Sbjct: 61 PKELAEKF 68
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 141 PTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
P GHA + D+IRR LEH + +++ + TDIDDKII +AN ED K +A+++
Sbjct: 12 PHLGHARTYIAFDVIRRYLEHKGYT-VLMVMNFTDIDDKIIRRANETGEDPKELAEKF 68
>gi|163751990|ref|ZP_02159201.1| cysteinyl-tRNA synthetase [Shewanella benthica KT99]
gi|161328148|gb|EDP99315.1| cysteinyl-tRNA synthetase [Shewanella benthica KT99]
Length = 459
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + P R ++ +P I ++ L++ + AY+ + V F V SF Y +
Sbjct: 95 EMHRDFDALNMKRPDFEPRATQHMPEIIDMVEKLIEKEYAYVSDNGDVLFSVSSFAEYGR 154
Query: 365 LWGRN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L G+N E + A KR P DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSGQNIEQLQAGARVEVEDTKRDPMDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ + +VNYW+HTG
Sbjct: 215 KHLGQHFDIHGGGSDLQFPHHENEIAQSCCAHD-TPYVNYWMHTG 258
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T+ K F + Y CG T+YD HIGH V D+I R L Y
Sbjct: 2 LKLYNSLTRQKEEFKPLQPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYL-RYSGYE 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL--IFKILHQKVVGSIPTRGHAVCN 149
++TD+DDKII +A E K++ +R + F L+ K P +
Sbjct: 61 VNFQRNITDVDDKIIKRAAENNESCKSLTERLIGEMHRDFDALNMKRPDFEPRATQHMPE 120
Query: 150 VKLDIIRRILEHYF 163
+ +D++ +++E +
Sbjct: 121 I-IDMVEKLIEKEY 133
>gi|344340320|ref|ZP_08771246.1| cysteinyl-tRNA synthetase [Thiocapsa marina 5811]
gi|343799978|gb|EGV17926.1| cysteinyl-tRNA synthetase [Thiocapsa marina 5811]
Length = 466
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 99/165 (60%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + G+LPPT R + + I + I TL++ AY+ + VY+ V F Y KL G
Sbjct: 98 EDSDALGILPPTDEPRATAHMDEILAMIGTLIEKGLAYVAENGDVYYAVARFAGYGKLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ + KR P DFALWKSAKPGEP ++S WG GRPGWHIECSAM++
Sbjct: 158 KDPQDLRAGARVEVDEAKRDPLDFALWKSAKPGEPAWDSPWGPGRPGWHIECSAMSTCAL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS ++ +VN W+H G +R
Sbjct: 218 GHHFDIHGGGADLQFPHHENEIAQSEGATGET-FVNVWMHNGFVR 261
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++I+N +T+ K PF ++ Y CG TVYD H+GHA V D++ R L
Sbjct: 2 LQIHNSLTRRKEPFEPIEPRKVRMYVCGMTVYDYCHLGHARVMVVFDVVYRYL-RALGYE 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQ--KVVGSIPTRGHAVCN 149
I ++TDIDDKII +A E + + R+ + +H+ +G +P
Sbjct: 61 VTYIRNITDIDDKIIRRAAEAGESMQALTDRF-----IQAMHEDSDALGILPPTDEPRAT 115
Query: 150 VKLDII 155
+D I
Sbjct: 116 AHMDEI 121
>gi|334143779|ref|YP_004536935.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium cyclicum ALM1]
gi|333964690|gb|AEG31456.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium cyclicum ALM1]
Length = 458
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 103/172 (59%), Gaps = 8/172 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E +L P + ++FIP IQ + TL++ AY ++ VYF V SF
Sbjct: 92 RFITAMHEDETALNILRPDIEPKATDFIPEIQQLVNTLIEKGHAYAATNGDVYFKVKSFE 151
Query: 361 HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L G+ ++ + K+ P DF LWK++K EP ++SAWG+GRPGWHIECS
Sbjct: 152 SYGRLSGKKQDELEAGARVEVNPNKQDPMDFVLWKASKANEPAWDSAWGQGRPGWHIECS 211
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
AM+ G ++D+H GG+DL+FPHHENE AQS H + +VN W+H G +R
Sbjct: 212 AMSGSCIGERLDIHGGGMDLQFPHHENEIAQSECAHGE-HYVNTWMHVGFVR 262
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 29/157 (18%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFH 89
+ IYN T+ K F + Y CG TVYD HIGHA V D ++R +
Sbjct: 2 ALHIYNTETRQKEVFKPIVPGKVGMYVCGVTVYDYCHIGHARVMVVFDTVVRHMRARGLE 61
Query: 90 IHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL-----IFKILH----------- 133
+ + ++TDIDDKII +A +E +++ +R+ + IL
Sbjct: 62 VK--YVRNITDIDDKIIKRALENQESVQSLTERFITAMHEDETALNILRPDIEPKATDFI 119
Query: 134 ---QKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHS 167
Q++V ++ +GHA D+ YF + S
Sbjct: 120 PEIQQLVNTLIEKGHAYAATNGDV-------YFKVKS 149
>gi|220917782|ref|YP_002493086.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
gi|254765172|sp|B8JDH1.1|SYC_ANAD2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|219955636|gb|ACL66020.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 481
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 98/179 (54%), Gaps = 11/179 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ + E M+ G L P RVS IP I + I L++ AY + VY+ V FP
Sbjct: 92 RFADAFHEDMDALGNLRPDVEPRVSGHIPEIVALIARLVERGFAYAPGNGDVYYAVRKFP 151
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L RN + KR P DFALWK+AKPGEP +ES WGKGRPGWHIECS
Sbjct: 152 EYGRLSKRNLDDLIAGARVEPGEAKRDPLDFALWKAAKPGEPAWESPWGKGRPGWHIECS 211
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS----QWVNYWLHTGHLRGTD 468
AM G +DLH GG DL FPHH NE AQS A + + YW+H G ++ D
Sbjct: 212 AMTQKHLGAPIDLHAGGKDLVFPHHTNEIAQSVAATSDGLHAEDFARYWMHNGFVQIDD 270
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I++++ +T K + L+ Y CGPTVYD H+GHA C V D++ R L +
Sbjct: 3 IQVHDTLTAQKRELVPLEPGKLRLYVCGPTVYDYSHLGHARCYVVWDVVVRHLRAR-GLE 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVK 151
+ + TD+DDKII +AN ED +A R+ H+ + A+ N++
Sbjct: 62 VRFVRNFTDVDDKIIQRANERGEDPIALASRF-----ADAFHEDM--------DALGNLR 108
Query: 152 LDIIRRILEHYFHIHSIVISSV 173
D+ R+ H I +++ V
Sbjct: 109 PDVEPRVSGHIPEIVALIARLV 130
>gi|418003101|ref|ZP_12643202.1| cysteinyl-tRNA synthetase [Lactobacillus casei UCD174]
gi|410542931|gb|EKQ17332.1| cysteinyl-tRNA synthetase [Lactobacillus casei UCD174]
Length = 444
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 109/193 (56%), Gaps = 15/193 (7%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ + E G+ P T R S+ IP I F+Q L+D + AY D VY+ F
Sbjct: 67 RFIDAFMEDTTALGIEPATAHPRASQMIPDIIDFVQDLIDKEYAY-AVDGDVYYRARKFK 125
Query: 361 HYFKLWGRN-----ENITQH------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWH 409
HY +L +N E +QH A K P DFALWK+AKPGE +ES WGKGRPGWH
Sbjct: 126 HYGELSHQNVDELEEGASQHITQDELAKKEDPIDFALWKAAKPGEISWESPWGKGRPGWH 185
Query: 410 IECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR-GTD 468
IECS M++ G D+H GG DL+FPHHENE AQS A Q+V YW+H G + G D
Sbjct: 186 IECSVMSTKLLGDTFDIHGGGQDLEFPHHENEIAQSEA-KTDKQFVRYWMHNGFVTIGED 244
Query: 469 GTRRLRA-ARFIT 480
+ ++ FIT
Sbjct: 245 DEKMSKSLGNFIT 257
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKED 115
Y CGPTVY+ HIG+A + D IRR E Y +S+ TD+DDKIIN A+ E
Sbjct: 2 YVCGPTVYNYIHIGNARSAIAFDTIRRYFE-YRGYKVTYVSNFTDVDDKIINAAHKTGEA 60
Query: 116 YKTVAKRY 123
+A+R+
Sbjct: 61 PLDLAQRF 68
>gi|197122993|ref|YP_002134944.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. K]
gi|229558614|sp|B4UGC3.1|SYC_ANASK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|196172842|gb|ACG73815.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. K]
Length = 481
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 98/179 (54%), Gaps = 11/179 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ + E M+ G L P RVS IP I + I L++ AY + VY+ V FP
Sbjct: 92 RFADAFHEDMDALGNLRPDVEPRVSGHIPEIVALIARLVERGFAYAPGNGDVYYAVRKFP 151
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L RN + KR P DFALWK+AKPGEP +ES WGKGRPGWHIECS
Sbjct: 152 EYGRLSKRNLDDLIAGARVEPGEAKRDPLDFALWKAAKPGEPAWESPWGKGRPGWHIECS 211
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS----QWVNYWLHTGHLRGTD 468
AM G +DLH GG DL FPHH NE AQS A + + YW+H G ++ D
Sbjct: 212 AMTQKHLGAPIDLHAGGKDLVFPHHTNEIAQSVAATSDGLHAEDFARYWMHNGFVQIDD 270
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I++++ +T K + L+ Y CGPTVYD H+GHA C V D++ R L +
Sbjct: 3 IQVHDTLTAQKRELVPLEPGKLRLYVCGPTVYDYSHLGHARCYVVWDVVVRHLRAR-GLE 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVK 151
+ + TD+DDKII +AN ED +A R+ H+ + A+ N++
Sbjct: 62 VRFVRNFTDVDDKIIQRANERGEDPIALASRF-----ADAFHEDM--------DALGNLR 108
Query: 152 LDIIRRILEHYFHIHSIVISSV 173
D+ R+ H I +++ V
Sbjct: 109 PDVEPRVSGHIPEIVALIARLV 130
>gi|14590527|ref|NP_142595.1| cysteinyl-tRNA synthetase [Pyrococcus horikoshii OT3]
gi|6831682|sp|O58370.1|SYC_PYRHO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|3257043|dbj|BAA29726.1| 476aa long hypothetical cysteinyl-tRNA synthetase [Pyrococcus
horikoshii OT3]
Length = 476
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 99/164 (60%), Gaps = 9/164 (5%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ E M+ V P RV+E I I FI+ L + AY GSD VYF+V F Y KL
Sbjct: 97 FLEDMKALKVKPADIYPRVTEHIEDIIQFIERLKEKGYAYEGSD-GVYFEVQKFKEYGKL 155
Query: 366 WG-------RNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
G + + K++P DFALWK AKPGEP +ES WG+GRPGWHIECS M+S
Sbjct: 156 SGVKLEELRKGARVEPGEGKKNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSVMSSK 215
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
+ G D+H GG DL FPHHENE AQS A +WV+YWLHTG
Sbjct: 216 YLGESFDIHGGGNDLIFPHHENEIAQSEACFGH-EWVHYWLHTG 258
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++IYN +TK K F N+ ++ Y CGPTVYD PH+GHA + D+IRR LEH +
Sbjct: 3 LRIYNTLTKQKEEFKPINEGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGY-S 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+++ + TDIDDKII +A ED +A+++
Sbjct: 62 VLMVMNFTDIDDKIIRRAKETGEDPAKLAEKF 93
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 141 PTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFL 200
P GHA + D+IRR LEH + +++ + TDIDDKII +A ED +A
Sbjct: 37 PHLGHARTYIAFDVIRRYLEHKGY-SVLMVMNFTDIDDKIIRRAKETGEDPAKLA----- 90
Query: 201 RLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKD 260
+K ++ D+K KV + + E ++++ ++K++ ++ D
Sbjct: 91 --------EKFIKVFLEDMKALKVKPADIYPRVTEHIEDIIQFIERLKEKGY--AYEGSD 140
Query: 261 GKVFSDRVF 269
G F + F
Sbjct: 141 GVYFEVQKF 149
>gi|114048058|ref|YP_738608.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-7]
gi|123030490|sp|Q0HTK4.1|SYC_SHESR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|113889500|gb|ABI43551.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-7]
Length = 461
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + ++ P R + I I ++ LL AY+ +D V F V SFP Y +
Sbjct: 97 EMHKDFDALNMIRPDFEPRATLHIAEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGR 156
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L G+N Q K++P DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 157 LSGQNLEQLQAGARVEVDDNKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 216
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ + +VNYW+HTG
Sbjct: 217 KHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHD-TPYVNYWMHTG 260
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN IT+ K F + Y CG TVYD HIGH V D+I R L Y
Sbjct: 4 LKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYL-RYAGYE 62
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
++TDIDDKII +AN +ED T+ R
Sbjct: 63 VNFQRNITDIDDKIIKRANENQEDCNTLTDR 93
>gi|260655864|ref|ZP_05861333.1| cysteine--tRNA ligase [Jonquetella anthropi E3_33 E1]
gi|424844377|ref|ZP_18268988.1| cysteinyl-tRNA synthetase [Jonquetella anthropi DSM 22815]
gi|260629480|gb|EEX47674.1| cysteine--tRNA ligase [Jonquetella anthropi E3_33 E1]
gi|363985815|gb|EHM12645.1| cysteinyl-tRNA synthetase [Jonquetella anthropi DSM 22815]
Length = 467
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 104/168 (61%), Gaps = 11/168 (6%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY-IGSDHSVYFDVDSFPHYF 363
+Y+E + G+ + R +E++P I +Q L+D AY +G +VYFDV SFP Y
Sbjct: 96 DYYEDADALGIKRASYNPRATEYMPQIIQLVQKLIDRGHAYAVGG--TVYFDVKSFPQYG 153
Query: 364 KLWGRNEN-------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
+L +N + I K+ P DF LWK KPGEP ++S WGKGRPGWHIECS M+
Sbjct: 154 RLSKQNMDELLAGARIEVDDAKKCPLDFVLWKPQKPGEPAWDSPWGKGRPGWHIECSVMS 213
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
+ G +D+H+GG+DL FPHHENE AQ+ A + +VN+WLH ++
Sbjct: 214 TALLGDTIDIHSGGVDLTFPHHENEIAQAEAATGKP-FVNFWLHNEYI 260
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+ +YN +T+ K F+ + +Y+CGPTVYD HIG+A + D++RR LE Y
Sbjct: 2 ALSLYNDLTRNKELFVPLADGKVSFYSCGPTVYDYFHIGNARPFIVFDVLRRYLE-YKGY 60
Query: 91 HSIVISSVTDIDDKIINKAN 110
+ + TDIDDK+I++AN
Sbjct: 61 QVTFVQNFTDIDDKMIDRAN 80
>gi|387886020|ref|YP_006316319.1| cysteinyl-tRNA synthetase [Francisella noatunensis subsp.
orientalis str. Toba 04]
gi|386870836|gb|AFJ42843.1| cysteinyl-tRNA synthetase [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 459
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 104/165 (63%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
++ +K +L PT+ R ++ IP + + IQTL++ AY G++ V++ V F Y KL
Sbjct: 97 DAFDKLNILRPTKEPRATQTIPEMIAMIQTLVEKGFAYQGTNGDVFYRVAKFADYGKLSK 156
Query: 368 RN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+N E + Q + K +P DF LWK AK GEP ++S WG GRPGWHIECSAM+
Sbjct: 157 QNLEALEQGSRVDVVEEKENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLL 216
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS A N+ + NYWLH+G ++
Sbjct: 217 GDTFDIHAGGSDLRFPHHENEIAQSEAC-NECTFANYWLHSGMVK 260
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 35 YNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIV 94
YN ++ K F N +K Y CG TVYD HIGHA N+ D+I R + Y
Sbjct: 4 YNSLSSKKEEFKPIEPNKIKMYVCGITVYDDCHIGHARTNIAFDVINRYFK-YRGFDVTF 62
Query: 95 ISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII ++N E + +R
Sbjct: 63 VRNITDIDDKIIKRSNENGETIDQLVER 90
>gi|332289654|ref|YP_004420506.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
gi|330432550|gb|AEC17609.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
Length = 459
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 99/169 (58%), Gaps = 8/169 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R E ++ + + P R + IP I + +Q L+D AY+ + V FDVDSFP
Sbjct: 91 RMVAEMYKDFDALNIQRPDFEPRATHHIPEIIALVQRLIDNGHAYVAQNGDVMFDVDSFP 150
Query: 361 HYFKLWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL ++ + Q + +K++P DF LWK +K EP ++S WG GRPGWHIECS
Sbjct: 151 EYGKLSRQDLSQLQAGARVEINDIKKNPMDFVLWKMSKENEPSWQSPWGAGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM G D+H GG DL FPHHENE AQSC H + +VNYWLH+G
Sbjct: 211 AMNCKQLGEHFDIHGGGSDLMFPHHENEIAQSCCAHGGA-YVNYWLHSG 258
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KI+N + + K F + N + Y CG TVYD HIGH V D+I R L Y H
Sbjct: 2 LKIFNTLKREKEIFTPIHPNQVGMYVCGVTVYDLCHIGHGRTFVSFDVIARYLR-YLGYH 60
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 61 LTYVRNITDVDDKIIKRA 78
>gi|315230286|ref|YP_004070722.1| cysteinyl-tRNA synthetase [Thermococcus barophilus MP]
gi|315183314|gb|ADT83499.1| cysteinyl-tRNA synthetase [Thermococcus barophilus MP]
Length = 474
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 103/167 (61%), Gaps = 10/167 (5%)
Query: 304 LEYF-ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHY 362
L+YF E M+ V P RV+E I I F++ L + AY GSD VYF+V F Y
Sbjct: 92 LKYFLEDMKALKVKPADIYPRVTEHIEDIIDFVKKLEEKGYAYEGSD-GVYFEVQRFRDY 150
Query: 363 FKLWG-------RNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAM 415
KL G + + KR+P DFALWK AKPGEP ++S WG+GRPGWHIECS M
Sbjct: 151 GKLSGIKLEELRKGARVEPGEGKRNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSTM 210
Query: 416 ASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
++ + G Q D+H GG DL FPHHENE AQ+ A + +WV YWLHTG
Sbjct: 211 STKYLGEQFDIHGGGNDLIFPHHENEIAQTEACTGK-EWVRYWLHTG 256
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +TK K F + ++ Y CGPTVYD H+GHA + D+IRR LEH +
Sbjct: 1 MKVYNTLTKQKEEFKPLREGEVRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHKGYT- 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAK---RYFL 125
+++ + TDIDDKII +A ED K +A+ +YFL
Sbjct: 60 VLMVMNFTDIDDKIIRRAQETGEDPKELAEKFLKYFL 96
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAK---RYFL 200
GHA + D+IRR LEH + +++ + TDIDDKII +A ED K +A+ +YFL
Sbjct: 38 GHARTYIAFDVIRRYLEHKGYT-VLMVMNFTDIDDKIIRRAQETGEDPKELAEKFLKYFL 96
>gi|308808270|ref|XP_003081445.1| D84717 probable cysteinyl-tRNA synthetase (ISS) [Ostreococcus
tauri]
gi|116059908|emb|CAL55967.1| D84717 probable cysteinyl-tRNA synthetase (ISS) [Ostreococcus
tauri]
Length = 661
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 100/173 (57%), Gaps = 14/173 (8%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ E M G L PT R +E + I +FI+ L+ AY S VYF VD+ P Y L
Sbjct: 256 FHEDMTALGCLRPTLEPRATECVDDIIAFIERLIAKGNAYEAS-GDVYFSVDTLPAYGAL 314
Query: 366 WGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
GR E + K++P DFALWK+AKPGEP + S WG GRPGWHIECSAM
Sbjct: 315 SGRKQDDNRAGERVAVDERKKNPADFALWKTAKPGEPTWTSPWGDGRPGWHIECSAMIEK 374
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQS-----CAFH-NQSQWVNYWLHTGHLR 465
G +D+H GG DL FPHHENE AQS C H +++ +V YW+H G ++
Sbjct: 375 MLGPTIDIHGGGQDLVFPHHENELAQSSAACGCGAHADENPFVRYWVHNGFVK 427
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 34 IYNPITKTKVPFIIQN--KNHLKWYACGPTVYDSPHIGHAVCNVKLDII-RRILEHYFHI 90
+ N +T+ K FI ++ ++ Y CG TVYD HIGHA V D++ RR++ + +
Sbjct: 162 LTNTMTRKKELFIPRDPAGKKVQMYVCGVTVYDYSHIGHARVYVAFDVLYRRLMGLGYDV 221
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
+ TDIDDKII ++N E + + ++
Sbjct: 222 --TYCRNFTDIDDKIIKRSNESGETCEALTNKFI 253
>gi|407716366|ref|YP_006837646.1| cysteinyl-tRNA synthetase [Cycloclasticus sp. P1]
gi|407256702|gb|AFT67143.1| Cysteinyl-tRNA synthetase, class Ia [Cycloclasticus sp. P1]
Length = 463
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 107/187 (57%), Gaps = 8/187 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E + VL P ++ + I + I+ L+ AY+G ++ VY+ V+SF
Sbjct: 93 RFIDEMHQDEASLNVLSPDIEPLATDSMEAIITMIEQLIANDNAYVGPNNDVYYCVESFE 152
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
+Y +L GR E + + KR+PFDF LWKSAKP EP + S WG GRPGWHIECS
Sbjct: 153 NYGQLSGRKLDDMNAGERVDVDSSKRNPFDFVLWKSAKPDEPSWSSPWGNGRPGWHIECS 212
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
AMA+ G D+H GG+DL+FPHHENE AQS A + ++VN W+H G +R D
Sbjct: 213 AMATCCLGNHFDIHGGGMDLQFPHHENEIAQSEAATGE-KYVNTWMHNGFVRIDDEKMSK 271
Query: 474 RAARFIT 480
F T
Sbjct: 272 SLGNFFT 278
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 30 TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
+ +KI+N +TK K F+ NK + Y CG TVYD HIGHA V D++ R L+ Y
Sbjct: 2 SALKIHNTLTKQKETFVPINKGEVNLYVCGMTVYDFCHIGHARVMVVFDVVSRYLK-YLG 60
Query: 90 IHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
+ + ++TDIDDKII ++ ED+K + KR+
Sbjct: 61 YNVKYVRNITDIDDKIITRSIESGEDFKQLTKRFI 95
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 199
GHA V D++ R L+ Y + + ++TDIDDKII ++ ED+K + KR+
Sbjct: 41 GHARVMVVFDVVSRYLK-YLGYNVKYVRNITDIDDKIITRSIESGEDFKQLTKRFI 95
>gi|113970833|ref|YP_734626.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-4]
gi|123029526|sp|Q0HH98.1|SYC_SHESM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|113885517|gb|ABI39569.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-4]
Length = 461
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + ++ P R + I I ++ LL AY+ +D V F V SFP Y +
Sbjct: 97 EMHKDFDALNMIRPDFEPRATLHITEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGR 156
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L G+N Q K++P DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 157 LSGQNLEQLQAGARVEVDDNKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 216
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ + +VNYW+HTG
Sbjct: 217 KHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHD-TPYVNYWMHTG 260
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN IT+ K F + Y CG TVYD HIGH V D+I R L Y
Sbjct: 4 LKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYL-RYAGYE 62
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
++TDIDDKII +AN +ED T+ R
Sbjct: 63 VNFQRNITDIDDKIIKRANENQEDCNTLTDR 93
>gi|227502088|ref|ZP_03932137.1| cysteinyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
gi|227077147|gb|EEI15110.1| cysteinyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
Length = 468
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 112/175 (64%), Gaps = 17/175 (9%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI-----GSDHSVYFDV 356
YE E+ ++ GVLPP+ R + F+ + ++Q L+D AY G+ SVYFDV
Sbjct: 94 YEREFTKAYNLLGVLPPSVEPRATGFVTQMVEYMQRLIDAGFAYPVPAPDGAAGSVYFDV 153
Query: 357 DSF-----PHYFKLWG-RNENITQ----HAVKRSPFDFALWKSAKPGEPWYESAWGKGRP 406
+++ Y L G R E + Q +A KRSP DFALWK+AKPGEP + + WG+GRP
Sbjct: 154 EAWTKAEGSDYGALSGNRVEEMEQGESDNAGKRSPLDFALWKAAKPGEPSWPTPWGRGRP 213
Query: 407 GWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHT 461
GWH+ECSAM++++ G D+H GG+DL+FPHHENE AQS A + ++ NYW+H
Sbjct: 214 GWHLECSAMSTYYLGSNFDIHCGGLDLQFPHHENEIAQSHAAGD--KFANYWMHN 266
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRR-ILEHYFHI 90
++I++ T+++ F H Y CG T PHIGH V DI+RR +L + +
Sbjct: 4 LRIFDTATRSQRDFEPIRPGHASIYLCGATPQAQPHIGHLRSGVAFDILRRWLLAQGYDV 63
Query: 91 HSIVISSVTDIDDKIINKA 109
++ +VTDIDDKI+ KA
Sbjct: 64 --ALVRNVTDIDDKILTKA 80
>gi|6599476|gb|AAF18750.1|AF163997_1 cysteinyl-tRNA synthetase [Methanococcus maripaludis]
Length = 476
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 108/182 (59%), Gaps = 9/182 (4%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ + M V P +V+E I I +FI+ L++ AY D VYF+V F +Y KL
Sbjct: 96 FLDDMATLKVKPADIYPKVTEHISEIIAFIERLIEKGFAYKTED-GVYFEVKKFKNYGKL 154
Query: 366 WGRN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
N E++ A K++ DFALWK+AKPGEP +ES +GKGRPGWHIECSAM+S
Sbjct: 155 SNINLEDLVSGARVETSEKKKNQKDFALWKTAKPGEPKWESPFGKGRPGWHIECSAMSSK 214
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAARF 478
+ G Q D+H GG DL FPHHENE AQS A+ + WVNYW+HTG + F
Sbjct: 215 YLGEQFDIHGGGRDLSFPHHENEIAQSSAYSGK-DWVNYWIHTGFVMVNGEKMSKSLGNF 273
Query: 479 IT 480
IT
Sbjct: 274 IT 275
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T+ + F NKN +K Y CGP VYD+ H+GH V LDIIRR LEH +
Sbjct: 2 LKVYNTLTRKEEEFKTLNKNEVKMYVCGPPVYDTTHLGHGRTYVSLDIIRRYLEHIGYTV 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
++VI + TDIDDKII +A +D K +++++
Sbjct: 62 NLVI-NFTDIDDKIIKRAYEKGKDPKEISEQF 92
>gi|337754352|ref|YP_004646863.1| cysteinyl-tRNA synthetase [Francisella sp. TX077308]
gi|336445957|gb|AEI35263.1| Cysteinyl-tRNA synthetase [Francisella sp. TX077308]
Length = 459
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 103/165 (62%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E +K +L P+ + +E IP + + I+TL++ AY G++ V++ V F Y KL
Sbjct: 97 EVFDKLNILKPSFEPKATETIPEMIAMIETLVEKGFAYQGANGDVFYRVAEFADYGKLSK 156
Query: 368 RN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+N E + Q + K +P DF LWK AK GEP +ES WG GRPGWHIECSAM+
Sbjct: 157 QNLEALEQGSRVDVVEEKENPMDFVLWKKAKEGEPAWESPWGAGRPGWHIECSAMSKKIL 216
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS A N ++VNYWLH+G ++
Sbjct: 217 GNTFDIHAGGSDLRFPHHENEVAQSEAC-NDCKYVNYWLHSGMVK 260
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 35 YNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIV 94
YN ++ K F N +K YACG TVYD HIGHA + D+I R + Y
Sbjct: 4 YNSLSGKKEEFKPIEPNKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFK-YRGFDVTF 62
Query: 95 ISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +A E + R
Sbjct: 63 VRNITDIDDKIIKRAKENSESTTELVDR 90
>gi|240949657|ref|ZP_04753992.1| cysteinyl-tRNA synthetase [Actinobacillus minor NM305]
gi|240295915|gb|EER46591.1| cysteinyl-tRNA synthetase [Actinobacillus minor NM305]
Length = 459
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 96/167 (57%), Gaps = 8/167 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R ++ IP I + ++ L+ AY+ D V FDV+SF Y
Sbjct: 95 EMHKDFDALNILRPDVEPRATKHIPEIVAMVEKLIANGHAYVAEDGDVMFDVESFKQYGA 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q +VK++P DF LWK +K EP ++S WG GRPGWHIECSAM S
Sbjct: 155 LSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKENEPSWQSPWGNGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG DL FPHHENE AQSC H +VNYWLHTG L
Sbjct: 215 KELGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-GDYVNYWLHTGML 260
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN + + K F N N + Y CG TVYD H GH V D+I R L Y +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQIGMYVCGVTVYDLCHFGHGRTFVSFDVIVRYL-RYSGYN 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TD+DDKII +A KE + R +
Sbjct: 61 VRYVRNITDVDDKIIKRALENKETCDQLVDRMIAEM 96
>gi|421498398|ref|ZP_15945512.1| cysteinyl-tRNA synthetase [Aeromonas media WS]
gi|407182600|gb|EKE56543.1| cysteinyl-tRNA synthetase [Aeromonas media WS]
Length = 458
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 98/162 (60%), Gaps = 8/162 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
+ + G+L P R ++ I I + ++TLL+ + AY+ + V F V+SF Y KL G
Sbjct: 98 QDFDALGMLRPDIEPRATQHIHEIIALVETLLEKEHAYVADNGDVMFIVESFADYGKLSG 157
Query: 368 RNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ Q KR+P DF LWK +KPGEP ++S WG GRPGWHIECSAM S
Sbjct: 158 QDLEQLQAGARVDVVEAKRNPLDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H +VN W+H+G
Sbjct: 218 GNHFDIHGGGSDLQFPHHENEIAQSCCAHG-GDYVNTWMHSG 258
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVSFDVVARYL-RYAGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVK 151
+ ++TD+DDKII +A + + L ++++G + A+ ++
Sbjct: 61 LTYVRNITDVDDKIIKRAAETR-------------VTCDDLTERLIGDMHQDFDALGMLR 107
Query: 152 LDIIRRILEHYFHIHSIV 169
DI R +H I ++V
Sbjct: 108 PDIEPRATQHIHEIIALV 125
>gi|347948730|pdb|3TQO|A Chain A, Structure Of The Cysteinyl-Trna Synthetase (Cyss) From
Coxiella Burnetii
Length = 462
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 97/164 (59%), Gaps = 8/164 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + VL P + R ++++P I IQ LLD + AY G + V+FDV F Y KL
Sbjct: 101 EDEKALRVLSPDQEPRATQYVPEIIKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSH 160
Query: 368 RNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
R+ + Q KR P DF LWK AKPGEP ++S WG+GRPGWHIECSA +S
Sbjct: 161 RHLDELQAGARVEVSDSKRDPLDFVLWKKAKPGEPKWDSPWGEGRPGWHIECSAXSSSIL 220
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG+DLKFPHHENE AQS A + +V W H G L
Sbjct: 221 GQPFDIHGGGLDLKFPHHENEIAQSEA-GEEKPFVKLWXHAGLL 263
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KI+N +TK K F +K Y CG TVYD HIGH + D + R L +
Sbjct: 5 VKIFNSLTKQKEIFKPIESGKVKLYVCGXTVYDYXHIGHGRSWIIFDXVVRYLRXRGY-E 63
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQ 134
+ ++TDIDDKII +A KE +A+R+ +ILH+
Sbjct: 64 VTFVRNITDIDDKIIKRAGENKESPAALAERF-----IQILHE 101
>gi|377832153|ref|ZP_09815117.1| cysteinyl-tRNA synthetase [Lactobacillus mucosae LM1]
gi|377554160|gb|EHT15875.1| cysteinyl-tRNA synthetase [Lactobacillus mucosae LM1]
Length = 470
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 103/168 (61%), Gaps = 13/168 (7%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ E + P T+ R +E IP I FI+ L++ AY+ D +VY+ F HY +L
Sbjct: 96 FMEDTAALNIEPATKRPRATESIPEIIDFIKVLIEKDYAYV-KDGNVYYRTRKFKHYGEL 154
Query: 366 WGRN---------ENITQHAV--KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
G++ E+IT + K P DFALWK+AKPGE ++S WG+GRPGWHIECS
Sbjct: 155 SGQSIDDLETGASEHITAEEIQQKEDPLDFALWKAAKPGEINWDSPWGQGRPGWHIECSV 214
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
M++ + G +D+H GG DL+FPHHENE AQS A Q Q+V YW+H G
Sbjct: 215 MSTRYLGKTIDIHAGGQDLQFPHHENEIAQSEAETGQ-QFVRYWMHNG 261
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ IYN +T+ K F + + Y CGPTVY+ HIG+A + D +RR LE F +
Sbjct: 2 LTIYNTLTRKKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLE--FKGY 59
Query: 92 SI-VISSVTDIDDKIINKA 109
+ +S+ TD+DDK+I A
Sbjct: 60 QVNYVSNFTDVDDKMIKAA 78
>gi|341581496|ref|YP_004761988.1| cysteinyl-tRNA synthetase [Thermococcus sp. 4557]
gi|340809154|gb|AEK72311.1| cysteinyl-tRNA synthetase [Thermococcus sp. 4557]
Length = 476
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 101/168 (60%), Gaps = 13/168 (7%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ E ME V P RV+E + I F++ L + AY GSD VYF+V F Y KL
Sbjct: 97 FLEDMEALKVKPADVYPRVTEHMDDIIEFVRKLQEKGYAYEGSD-GVYFEVQRFKDYGKL 155
Query: 366 WG-------RNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
G + + K++P DFALWK AKPGEP +ES WG+GRPGWHIECS M++
Sbjct: 156 SGIKLEELRKGARVEPGEGKKNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTMSTK 215
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQ--SCAFHNQSQWVNYWLHTGHL 464
+ G D+H GG DL FPHHENE AQ +C H +WV+YWLHTG L
Sbjct: 216 YLGESFDIHGGGNDLIFPHHENEIAQTEACTGH---EWVHYWLHTGFL 260
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
I++YN +TK K F ++ Y CGPTVYD H+GHA V D+IRR LEH +
Sbjct: 2 AIRVYNTLTKQKEEFRPLRDGEVRMYVCGPTVYDYTHLGHARTYVAFDVIRRYLEHRGY- 60
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
+++ + TDIDDKII +AN ED K +A+R+
Sbjct: 61 SVLMVMNFTDIDDKIIRRANETGEDPKELAERFL 94
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V D+IRR LEH + +++ + TDIDDKII +AN ED K +A+R FLRL
Sbjct: 40 GHARTYVAFDVIRRYLEHRGY-SVLMVMNFTDIDDKIIRRANETGEDPKELAER-FLRLF 97
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGKV 263
+ D++ KV V + E D+++ +++++ ++ DG
Sbjct: 98 LE------------DMEALKVKPADVYPRVTEHMDDIIEFVRKLQEKGY--AYEGSDGVY 143
Query: 264 FSDRVF 269
F + F
Sbjct: 144 FEVQRF 149
>gi|257464496|ref|ZP_05628867.1| cysteinyl-tRNA synthetase [Actinobacillus minor 202]
gi|257450156|gb|EEV24199.1| cysteinyl-tRNA synthetase [Actinobacillus minor 202]
Length = 459
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 96/167 (57%), Gaps = 8/167 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + +L P R ++ IP I + ++ L+ AY+ D V FDV+SF Y
Sbjct: 95 EMHKDFDALNILRPDVEPRATKHIPEIIAMVEKLIANGHAYVAEDGDVMFDVESFKQYGA 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q +VK++P DF LWK +K EP ++S WG GRPGWHIECSAM S
Sbjct: 155 LSRQNLEQLQAGARVEIKSVKKNPMDFVLWKMSKENEPSWQSPWGNGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG DL FPHHENE AQSC H +VNYWLHTG L
Sbjct: 215 KELGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-GDYVNYWLHTGML 260
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN + + K F N N + Y CG TVYD H GH V D+I R L Y +
Sbjct: 2 LKIYNTLKREKEEFKPINPNQIGMYVCGVTVYDLCHFGHGRTFVSFDVIVRYL-RYSGYN 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TD+DDKII +A KE + R +
Sbjct: 61 VRYVRNITDVDDKIIKRALENKETCDQLVDRMIAEM 96
>gi|385805765|ref|YP_005842163.1| cysteinyl-tRNA synthetase [Fervidicoccus fontis Kam940]
gi|383795628|gb|AFH42711.1| cysteinyl-tRNA synthetase [Fervidicoccus fontis Kam940]
Length = 475
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 111/191 (58%), Gaps = 14/191 (7%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y +Y ++EK + P RV+ I I ++ L++ AY S+ SVYFDV +
Sbjct: 94 YTEDYINAIEKLRIEPDI-LPRVTHHIEDIIDAVKRLIEKGYAY-ESNGSVYFDVSKYDA 151
Query: 362 YFKL--------WGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L W + E + + K++PFDFALWK K GEP++ES WG GRPGWHIECS
Sbjct: 152 YGELSKKTGGENWRQEEEVIKE--KKNPFDFALWKKMKEGEPYWESPWGYGRPGWHIECS 209
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL--RGTDGTR 471
M+S + G +D+H GG DL FPHHENE AQS A WV YWLHTG L RG ++
Sbjct: 210 VMSSKYLGVPIDIHGGGGDLIFPHHENERAQSEALFGIKPWVRYWLHTGMLTIRGEKMSK 269
Query: 472 RLRAARFITNL 482
L F+ +L
Sbjct: 270 SLGNIVFLKDL 280
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 75/140 (53%), Gaps = 9/140 (6%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
IKIYN +T+ F+ + +K Y CGPTVYD HIGHA + D I++ YF +
Sbjct: 4 IKIYNTLTRQIEEFVSSEEGIVKMYVCGPTVYDYSHIGHARTYISFDAIKK----YFQLR 59
Query: 92 S---IVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSI-PTRGHAV 147
I + +VTDIDDKII +AN + +K +A Y I I ++ I P H +
Sbjct: 60 GYKVIHVQNVTDIDDKIIKRANQEGKSWKEIADFYTEDYINAIEKLRIEPDILPRVTHHI 119
Query: 148 CNVKLDIIRRILEHYFHIHS 167
++ +D ++R++E + S
Sbjct: 120 EDI-IDAVKRLIEKGYAYES 138
>gi|374621461|ref|ZP_09693993.1| cysteinyl-tRNA synthetase [Ectothiorhodospira sp. PHS-1]
gi|373940594|gb|EHQ51139.1| cysteinyl-tRNA synthetase [Ectothiorhodospira sp. PHS-1]
Length = 460
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GV P+ R + I I I TLL AY+G + VY+ V F Y KL G
Sbjct: 98 EDADALGVARPSFEPRATAHIHDILHMIGTLLRRGFAYVGDNGDVYYSVSLFDGYGKLSG 157
Query: 368 R-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+ E + KR P DF LWK+AKPGEP ++S WG GRPGWHIECSAM++H+
Sbjct: 158 KRIEDLRAGERVAPDESKRDPLDFVLWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTHYL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS A + +VNYW+H G +R
Sbjct: 218 GHHFDIHGGGQDLQFPHHENEIAQSEAASCE-HYVNYWMHNGFVR 261
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ IYN +T+ K PF ++ Y CG TVYD H+GHA V D++ R L+
Sbjct: 2 LHIYNTLTRRKDPFQSMEPGKVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLK-ALGYE 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ ++TDIDDKII +A E + + R+
Sbjct: 61 VTYVRNITDIDDKIIRRAAENGESIEALTDRF 92
>gi|430760198|ref|YP_007216055.1| Cysteinyl-tRNA synthetase [Thioalkalivibrio nitratireducens DSM
14787]
gi|430009822|gb|AGA32574.1| Cysteinyl-tRNA synthetase [Thioalkalivibrio nitratireducens DSM
14787]
Length = 469
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 101/175 (57%), Gaps = 9/175 (5%)
Query: 297 LFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDV 356
+ RY + E + G LPPT R ++ IP + S I+ L+ AY+ +DH + V
Sbjct: 92 VLTARYAHAFHEDVAGLGALPPTLEPRATKHIPQMISLIERLIARGHAYL-ADHHALYAV 150
Query: 357 DSFPHYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWH 409
S+P Y +L GR+ + + K+ P DF LWK +KPGEP +ES WG GRPGWH
Sbjct: 151 HSYPGYGRLSGRSLDDMRAGARVEVAEYKKDPADFVLWKPSKPGEPAWESPWGPGRPGWH 210
Query: 410 IECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
+ECSAM G +D+H GG DL FPHHENE AQ C H ++ +W+H GH+
Sbjct: 211 LECSAMIETHLGDTIDIHGGGHDLVFPHHENEIAQGCGAHG-VEYARFWVHNGHV 264
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEH-YFHIHS 92
++N + PF+ + + Y CGPTVY+ HIG+ V D++ R+L Y H
Sbjct: 7 LHNTLGGALEPFVPGDPERVTMYVCGPTVYNFVHIGNGRPIVVFDVLFRVLRALYGADHV 66
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVG 138
+ ++TD+DDKI A ED + RY H+ V G
Sbjct: 67 LYARNITDVDDKINQAAAENHEDIGVLTARY-----AHAFHEDVAG 107
>gi|374263848|ref|ZP_09622394.1| cysteine tRNA synthetase [Legionella drancourtii LLAP12]
gi|363535691|gb|EHL29139.1| cysteine tRNA synthetase [Legionella drancourtii LLAP12]
Length = 412
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E M +LPP R +E I I I+ LL AY+ + V + VDSF Y KL
Sbjct: 55 EDMRALNILPPNYEPRATEHIATIIRLIERLLARGNAYVSDNGDVCYQVDSFAEYGKLSH 114
Query: 368 RN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + A KRSP DF LWK AKPGEP++ S WG GRPGWHIECSAMA
Sbjct: 115 KDLEGLMSGARVEVVKEKRSPLDFVLWKKAKPGEPYWASPWGNGRPGWHIECSAMAIEEL 174
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG+DL+FPHHENE AQS A ++ + NYWLH G L+
Sbjct: 175 GEHFDIHGGGLDLQFPHHENEIAQSEAATHKP-FANYWLHVGMLQ 218
>gi|291000007|ref|XP_002682571.1| cysteinyl-tRNA synthetase [Naegleria gruberi]
gi|284096198|gb|EFC49827.1| cysteinyl-tRNA synthetase [Naegleria gruberi]
Length = 668
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 121/211 (57%), Gaps = 34/211 (16%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE ++E M++ V PT RV+E I + SFIQ ++D AY +VYFDV++F
Sbjct: 115 YEHLFWEDMKQLQVKTPTVLVRVTEHIDEVVSFIQQIIDNGFAY-EEGGNVYFDVEAFQQ 173
Query: 362 -----YFKL--W------------GRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWG 402
Y KL W G +E + K+S DFALWK++KPGEP ++S WG
Sbjct: 174 NQKHVYGKLEPWNVNCEERLMDGEGESETEKKVFKKKSKKDFALWKTSKPGEPEWDSKWG 233
Query: 403 KGRPGWHIECSAMASHFF------------GGQVDLHTGGIDLKFPHHENEEAQSCAFHN 450
KGRPGWHIECSAMA + +D+H GGIDLKFPHH+NE AQS A+
Sbjct: 234 KGRPGWHIECSAMACYALQQAAKLAGRSANDATLDVHCGGIDLKFPHHDNELAQSEAYLG 293
Query: 451 QSQWVNYWLHTGHLRGTDGTRRLRAAR-FIT 480
QWVNY+LHTGHL DG ++ + FIT
Sbjct: 294 SRQWVNYFLHTGHL-SIDGMSMSKSKKNFIT 323
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 91/155 (58%), Gaps = 20/155 (12%)
Query: 16 SCESPKWSLPSGYDTGIKIYNPITKTKVPFIIQ-NKNHLKWYACGPTVYDSPHIGHAVCN 74
S + P+W P G DTGI++YN +T K FI+Q N N + WY CGPTVYD H+GHA
Sbjct: 13 SVQQPEWFKPQGRDTGIEVYNSLTCQKEKFILQDNSNTITWYTCGPTVYDWSHMGHARTY 72
Query: 75 VKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQ 134
V DI+RRILE YF+ + I I ++TDIDDKII K+++ +V RY+ L ++ + Q
Sbjct: 73 VGFDIVRRILEDYFNFNVIYIENITDIDDKII------KKNFLSVP-RYYEHLFWEDMKQ 125
Query: 135 KVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIV 169
V + PT ++ R+ EH + S +
Sbjct: 126 LQVKT-PT-----------VLVRVTEHIDEVVSFI 148
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 19/106 (17%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA V DI+RRILE YF+ + I I ++TDIDDKII K+++ +V RY+ L
Sbjct: 67 GHARTYVGFDIVRRILEDYFNFNVIYIENITDIDDKII------KKNFLSVP-RYYEHLF 119
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKD 249
++ D+K+ +V + VL + E DE+++ QI D
Sbjct: 120 WE------------DMKQLQVKTPTVLVRVTEHIDEVVSFIQQIID 153
>gi|84391753|ref|ZP_00991655.1| cysteinyl-tRNA synthetase [Vibrio splendidus 12B01]
gi|84376466|gb|EAP93345.1| cysteinyl-tRNA synthetase [Vibrio splendidus 12B01]
Length = 461
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 94/152 (61%), Gaps = 8/152 (5%)
Query: 318 PTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENITQ--- 374
P R +EFI I ++ L++ AY+ S+ V F+V F Y KL ++ + Q
Sbjct: 108 PDVEPRATEFITEIVELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGA 167
Query: 375 ----HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGG 430
+ KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S G D+H GG
Sbjct: 168 RVDVDSAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGG 227
Query: 431 IDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
DL+FPHHENE AQSC H +Q+VN W+H+G
Sbjct: 228 SDLQFPHHENEIAQSCCAHG-TQYVNTWMHSG 258
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL--IFKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +AN E ++ +R + F L+ K P +
Sbjct: 61 LNFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITE 120
Query: 150 VKLDIIRRILEHYF 163
+ ++++ +++E F
Sbjct: 121 I-VELVEKLIERGF 133
>gi|51246780|ref|YP_066664.1| cysteinyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
gi|61216190|sp|Q6AJ23.1|SYC_DESPS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|50877817|emb|CAG37657.1| probable cysteinyl-tRNA synthetase [Desulfotalea psychrophila
LSv54]
Length = 489
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 105/187 (56%), Gaps = 9/187 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E+ M+ G L P + +E I + IQ L+D AY S VY+ V+SFP
Sbjct: 92 RFIDEFHTDMDNLGTLRPDIEPKATEHIQEMIDIIQELVDKDMAY-PSAGDVYYVVNSFP 150
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GRN I+ + KR+P DFALWK++KPGEP +ES WG GRPGWHIECS
Sbjct: 151 EYGKLSGRNIEDMQAGARISINEQKRNPMDFALWKASKPGEPSWESPWGPGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
AM+ + G D+H GG DL FPHHENE AQS N + N W+H G + D
Sbjct: 211 AMSRKYLGENFDIHGGGKDLIFPHHENEIAQSEG-ANGKPFANTWIHHGFVTIKDEKMSK 269
Query: 474 RAARFIT 480
F+T
Sbjct: 270 SLGNFLT 276
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I++YN ++ K P NH+K Y CG T YD HIGHA + D+I R L Y
Sbjct: 3 IRVYNTLSGKKEPLQPIEPNHVKLYVCGITSYDYCHIGHARSALAFDMIVRYL-RYLDYK 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
+ + TDIDDKII +AN + +A+R+
Sbjct: 62 VTFVRNFTDIDDKIIARANETGVTAQALAERFI 94
>gi|399018068|ref|ZP_10720254.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. CF444]
gi|398102033|gb|EJL92225.1| cysteinyl-tRNA synthetase [Herbaspirillum sp. CF444]
Length = 465
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 98/168 (58%), Gaps = 11/168 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E GV P R + ++P + I+TL + AY GSD V + V FP Y KL G
Sbjct: 100 EDSAALGVQKPDHEPRATAYVPQMLDLIRTLQNNGLAYQGSDGDVNYSVRDFPGYGKLSG 159
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPW---YESAWGKGRPGWHIECSAMAS 417
++ E + + KR P DF LWK+AK EP ++S WGKGRPGWHIECSAMA+
Sbjct: 160 KSLDDLRAGERVDVNTGKRDPLDFVLWKAAKESEPAEVKWDSPWGKGRPGWHIECSAMAN 219
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS H Q +VNYW+H G +R
Sbjct: 220 DLLGDHFDIHGGGQDLQFPHHENEIAQSEGAH-QHGFVNYWMHNGFVR 266
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 30 TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
+ +KIYN + + K F ++ Y CG TVYD H+GHA V D+++R L
Sbjct: 2 SNLKIYNTLARDKQVFSPIEPGKVRLYVCGMTVYDYCHLGHARVMVVFDMVQRWLRAS-G 60
Query: 90 IHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ ++TDIDDKII++A +E + +R+
Sbjct: 61 FDVTYVRNITDIDDKIIHRAIENRETIGQLTQRF 94
>gi|333992511|ref|YP_004525125.1| cysteinyl-tRNA synthetase 1 CysS1 [Mycobacterium sp. JDM601]
gi|333488479|gb|AEF37871.1| cysteinyl-tRNA synthetase 1 CysS1 [Mycobacterium sp. JDM601]
Length = 469
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 103/166 (62%), Gaps = 8/166 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E+ + + GVLPP+ R + I + I+ L+D+ AY G VYFDV S+P
Sbjct: 97 YEREFTAAYDALGVLPPSVEPRATGHITQMIELIERLIDSGHAYPGGG-DVYFDVLSYPE 155
Query: 362 YFKLWGRN-ENITQH----AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
Y +L G +++ Q KR P DF LWK AKPGEP + + WG+GRPGWH+ECSAMA
Sbjct: 156 YGQLSGHKIDDVHQGEGAATGKRDPRDFTLWKGAKPGEPSWPTPWGRGRPGWHLECSAMA 215
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
+ G + D+H GG+DL FPHHENE AQS A + + NYWLH G
Sbjct: 216 RTYLGPEFDIHCGGMDLVFPHHENEIAQSRAAGD--GFANYWLHNG 259
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+++++ T F+ + Y CG TV PHIGH V D++RR L +
Sbjct: 7 LRLHDTATGAVRDFVPLRPGQVSIYLCGATVQAPPHIGHVRSGVAFDVLRRWLTARGYDV 66
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ V +VTDIDDKI+ KA + + A Y
Sbjct: 67 AFV-RNVTDIDDKILTKAAAAGRPWWEWAATY 97
>gi|255585350|ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
gi|223526794|gb|EEF29017.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
Length = 530
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 106/179 (59%), Gaps = 8/179 (4%)
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFD 355
F + R+ EY M+ L PT RV++ I I+ I +++ AY S+ V+F
Sbjct: 91 FSLSSRFCEEYLVDMDSLQCLRPTHQPRVTDHIEQIKDMITQIINNGFAY-PSEGDVFFA 149
Query: 356 VDSFPHYFKLWG------RNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWH 409
VD FP+Y +L G R KR+P DFALWK+AKPGEP +ES WG GRPGWH
Sbjct: 150 VDKFPNYGQLSGQKLENHRAGERNPDTRKRNPADFALWKAAKPGEPSWESPWGPGRPGWH 209
Query: 410 IECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTD 468
IECSAM++ + + D+H GG DL FPHHENE QS A +S V+YW+H GH+ +
Sbjct: 210 IECSAMSAQYLTFKFDIHGGGSDLIFPHHENEITQSAAACQESN-VSYWIHNGHVTNNN 267
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 33 KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHS 92
K+YN + + F + Y CG T Y HIGHA V D++ R L+H +
Sbjct: 8 KLYNTMNRQLEAFKPHVPGKVGMYVCGVTAYAFSHIGHARAAVIFDVLFRYLQHLGY-EV 66
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ TDIDDKII +AN ED +++ R+
Sbjct: 67 TYARNFTDIDDKIIKRANESGEDPFSLSSRF 97
>gi|414153547|ref|ZP_11409870.1| Cysteine--tRNA ligase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454945|emb|CCO07774.1| Cysteine--tRNA ligase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 486
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 100/171 (58%), Gaps = 9/171 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY E+F+ + V+ + +VSE I I I+ L AY+ +D VYF V SFP
Sbjct: 90 RYIREFFKDADALNVMRADKHPKVSEHIAEIIDLIKQLEQQGHAYV-ADGDVYFAVRSFP 148
Query: 361 HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR+ Q K+ P DFALWK+AKPGEP + S WG GRPGWHIECS
Sbjct: 149 GYGKLSGRSLEDMQAGARVEIDPRKKDPMDFALWKAAKPGEPSWPSPWGAGRPGWHIECS 208
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AMA+ + G D+H GG DL FPHHENE AQS A Q + YW+H G +
Sbjct: 209 AMAAKYLGNGFDIHGGGFDLIFPHHENEIAQSEAACGQP-FARYWMHNGFI 258
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++IYN +TKTK FI + K + Y CGPT Y+ H+G+A V D +RR Y
Sbjct: 1 MQIYNTLTKTKQEFIPREKGKVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYF-IYKGYQ 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKII +A + D +A+RY
Sbjct: 60 VNYVQNFTDVDDKIIKRAWEEQTDPLELAQRY 91
>gi|300123539|emb|CBK24811.2| unnamed protein product [Blastocystis hominis]
Length = 595
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 118/212 (55%), Gaps = 40/212 (18%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+YE E+ E M+ G TRVSE++ I IQ +++ AY ++ SVYFD SF
Sbjct: 75 KYENEFMEDMKTLGCRTANVITRVSEYVDEIIEMIQGIINNGYAY-EANGSVYFDTTSFQ 133
Query: 361 H---YFKLWGRNENITQHAV------------------------KRSPFDFALWKSAKPG 393
Y KL T HAV KR P DFALWK++KPG
Sbjct: 134 KNHVYGKL------STAHAVLSLSLVPEMVGNVNTEEEQDFASEKRHPNDFALWKASKPG 187
Query: 394 EPWYESAWGKGRPGWHIECSAMASHFF----GGQVDLHTGGIDLKFPHHENEEAQSCAFH 449
EP + S WG GRPGWHIECSAM+ F G++D+H+GG+DL+ PHH NE AQS A+
Sbjct: 188 EPMWNSPWGAGRPGWHIECSAMSFSIFKTISDGRIDVHSGGVDLRLPHHTNEMAQSEAYM 247
Query: 450 NQSQWVNYWLHTGHLRGTDGTRRLRAAR-FIT 480
SQ VNY+LHTGHL DG + ++ + FIT
Sbjct: 248 ECSQSVNYFLHTGHL-NIDGLKMSKSLKNFIT 278
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%)
Query: 55 WYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKE 114
WY+CGPTVYD H+GHA + DII RIL YF+ + ++TDIDDKII ++
Sbjct: 8 WYSCGPTVYDVAHMGHARTYLSQDIIMRILRDYFNYDVQFVMNITDIDDKIIKRSTEAGI 67
Query: 115 DYKTVAKRY 123
+ +A++Y
Sbjct: 68 PFTELARKY 76
>gi|260779213|ref|ZP_05888105.1| cysteinyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
gi|260605377|gb|EEX31672.1| cysteinyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
Length = 460
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 94/152 (61%), Gaps = 8/152 (5%)
Query: 318 PTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENITQ--- 374
P R +EFI I ++ L++ AY+ + V F+V F Y KL ++ + Q
Sbjct: 108 PDVEPRATEFIAEIIELVEKLIERGFAYVADNGDVMFEVGQFDEYGKLSKQDLDQLQAGA 167
Query: 375 ----HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGG 430
+ KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S G D+H GG
Sbjct: 168 RVDVESAKRSPLDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSSILGNHFDIHGGG 227
Query: 431 IDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 228 SDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F N + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPINAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL--IFKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +AN E ++ +R + F L+ K P +
Sbjct: 61 LTFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFIAE 120
Query: 150 VKLDIIRRILEHYF 163
+ ++++ +++E F
Sbjct: 121 I-IELVEKLIERGF 133
>gi|288574958|ref|ZP_06393315.1| cysteinyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570699|gb|EFC92256.1| cysteinyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 469
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 102/167 (61%), Gaps = 9/167 (5%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
+YFE + G+ T R +E I I ++ L ++ AY D VYFDV SFP Y K
Sbjct: 96 DYFEDADALGIKRATHYPRATEHIEEIIDLVKRLEESGHAY-EVDGVVYFDVSSFPEYGK 154
Query: 365 LWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N I ++ KR+P DF LWK+ KPGEP ++S WGKGRPGWHIECSAMA
Sbjct: 155 LSRQNIEELQSGSRIEVNSSKRNPLDFVLWKAQKPGEPAWDSPWGKGRPGWHIECSAMAM 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
+ G +D+H+GG DL FPHHENE AQ+ A + +V YWLH ++
Sbjct: 215 KYLGNTLDIHSGGTDLTFPHHENEIAQAEA-ATEEVFVRYWLHNEYI 260
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 77/147 (52%), Gaps = 10/147 (6%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
+YN +T+ K PF+ + +Y+CGPTVYD HIG+A + D++RR +E +
Sbjct: 5 LYNDLTRKKEPFVPLKDGEVGFYSCGPTVYDYFHIGNARPFIVFDVLRRYME-FSGYRVT 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKR----YFLPLIFKILHQKVVGSIPTRGHAVCN 149
+ + TD+DDK+IN+AN + + +A++ YF L K P +
Sbjct: 64 FVQNFTDVDDKMINRANEMGITVQELAEKTIADYFEDA--DALGIKRATHYPRATEHIEE 121
Query: 150 VKLDIIRRILE--HYFHIHSIVISSVT 174
+ +D+++R+ E H + + +V V+
Sbjct: 122 I-IDLVKRLEESGHAYEVDGVVYFDVS 147
>gi|159899627|ref|YP_001545874.1| cysteinyl-tRNA synthetase [Herpetosiphon aurantiacus DSM 785]
gi|159892666|gb|ABX05746.1| cysteinyl-tRNA synthetase [Herpetosiphon aurantiacus DSM 785]
Length = 466
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/171 (46%), Positives = 99/171 (57%), Gaps = 8/171 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y L + + + + VLP T RVS IP I FI+ L+ AY S+ VYF V +
Sbjct: 93 YTLAFLDQLGQLNVLPATAYPRVSTTIPQIIQFIEGLIAKDAAYHASNGDVYFRVRADED 152
Query: 362 YFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
Y KL R I K P DFALWKSAKPGEP +ES WG+GRPGWHIECSA
Sbjct: 153 YGKLSRRAVDDMRSGARIAPDEAKDDPLDFALWKSAKPGEPAWESPWGQGRPGWHIECSA 212
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
M+ H Q+D+H GG DL FPHHENE AQ+ + ++ + W+H G L+
Sbjct: 213 MSLHELAEQIDIHGGGNDLIFPHHENEIAQTESLTGKN-FAQVWMHNGMLQ 262
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+ IYN +T+ PF +H+ Y CGPTVY HIGHA+ V D++RR LE +
Sbjct: 2 ALAIYNTLTRQTEPFTPLVADHVSMYVCGPTVYSDAHIGHAMSAVVFDVVRRYLEWSGYT 61
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVV 137
V+ + TD+DDKII +AN D +A+ Y L + ++ V+
Sbjct: 62 VRHVM-NFTDVDDKIIRRANEQGRDPMELAESYTLAFLDQLGQLNVL 107
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 11/105 (10%)
Query: 116 YKTVAKRY--FLPLIFKILHQKVVGSIPTR------GHAVCNVKLDIIRRILEHYFHIHS 167
Y T+ ++ F PL+ + V G PT GHA+ V D++RR LE +
Sbjct: 6 YNTLTRQTEPFTPLVADHVSMYVCG--PTVYSDAHIGHAMSAVVFDVVRRYLEWSGYTVR 63
Query: 168 IVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQKVV 212
V++ TD+DDKII +AN D +A+ Y L + ++ V+
Sbjct: 64 HVMN-FTDVDDKIIRRANEQGRDPMELAESYTLAFLDQLGQLNVL 107
>gi|445496217|ref|ZP_21463261.1| cysteine-tRNA ligase CysS [Janthinobacterium sp. HH01]
gi|444792378|gb|ELX13925.1| cysteine-tRNA ligase CysS [Janthinobacterium sp. HH01]
Length = 463
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 101/168 (60%), Gaps = 11/168 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E G+LP T R +E++P + + I+TL AY GSD V + V +FP+Y +L G
Sbjct: 100 EDTGALGILPATLVPRATEYVPQMLALIETLESKDLAYQGSDGDVNYAVRNFPNYGRLSG 159
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEP---WYESAWGKGRPGWHIECSAMAS 417
++ E + + KR P DF LWK++K EP ++S WGKGRPGWHIECSAM S
Sbjct: 160 KSLDDLRAGERVDVNTGKRDPLDFVLWKASKESEPDEVKWDSKWGKGRPGWHIECSAMCS 219
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS ++ VNYW+H G +R
Sbjct: 220 ALLGEHFDIHGGGADLQFPHHENEIAQSEGAFGRTM-VNYWVHNGFVR 266
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 30 TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRR-ILEHYF 88
+ +KIYN + + K F+ ++ Y CG T+YD HIGHA + D++ R +L +
Sbjct: 2 SNLKIYNTLARDKQTFVPIEAGKVRMYVCGMTIYDYCHIGHARMMMAFDVMYRWLLASGY 61
Query: 89 HIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ ++TDIDDKII +A E + R+
Sbjct: 62 EV--TYARNITDIDDKIIKRAVENGETISQLTTRF 94
>gi|358066738|ref|ZP_09153228.1| cysteinyl-tRNA synthetase [Johnsonella ignava ATCC 51276]
gi|356695009|gb|EHI56660.1| cysteinyl-tRNA synthetase [Johnsonella ignava ATCC 51276]
Length = 469
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 105/174 (60%), Gaps = 11/174 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY E + M ++P T+ ++ I ++ I+TL++ K AY+ D +VYFDV+SF
Sbjct: 90 RYIAECKKDMADMNIMPATKHPLATQEIDGMEDMIKTLIEKKHAYVAKDGTVYFDVESFK 149
Query: 361 HYFKLWGRNEN----------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHI 410
Y +L +N + +T K+SP DF LWK K GEP+++S W KGRPGWHI
Sbjct: 150 DYGRLSNKNIDELQSGFRELQVTGEESKKSPADFVLWKPKKEGEPYWDSPWSKGRPGWHI 209
Query: 411 ECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
ECS M+ + G Q+D+H GG DL FPHHENE AQS + + ++ N+W+H L
Sbjct: 210 ECSVMSRKYLGVQIDIHGGGEDLIFPHHENEIAQSES-SSGMKFANFWMHNAFL 262
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++I+N T+ K F+ + +K Y CGPTVY+ HIG+A + D +RR Y
Sbjct: 1 MRIFNTFTRKKEEFVPLEEGKVKMYVCGPTVYNLIHIGNARPMIFFDTVRRYF-IYKGYD 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+S+ TD+DDKIIN+A + ++ RY
Sbjct: 60 VNYVSNFTDVDDKIINRAKEEGVESIVISTRY 91
>gi|156742112|ref|YP_001432241.1| cysteinyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
gi|156233440|gb|ABU58223.1| cysteinyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
Length = 478
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 106/183 (57%), Gaps = 13/183 (7%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y E+ E +E V R +E +P IQ FI L++T AY+ D VYF V + P
Sbjct: 93 YIAEFLEDLEALNVKRAHIYPRATETMPEIQRFISRLIETGHAYV-VDGDVYFRVSTAPD 151
Query: 362 YFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
Y KL R+ I K +P DFALWK+AKPGEP+++S WG GRPGWHIECSA
Sbjct: 152 YGKLSRRSLDDMIAGNRIGIDERKENPADFALWKAAKPGEPFWDSPWGPGRPGWHIECSA 211
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL----RGTDGT 470
M G Q+D+H GG DL FPHHENE AQ+ + ++ + YW+H G L R DGT
Sbjct: 212 MNLAHLGEQIDIHGGGTDLIFPHHENEIAQTESLTGKT-FARYWMHNGMLQIQTRLADGT 270
Query: 471 RRL 473
+L
Sbjct: 271 YKL 273
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I+IYN +T+T PF +K Y CG TVYD HIGHA+ + D++RR LE+ +
Sbjct: 3 IRIYNTLTRTLEPFETLEPGVVKMYVCGVTVYDRAHIGHAMSAIVFDVVRRYLEYRGYAV 62
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
V+ + TD+DDKIIN+A++L D K +A+ Y
Sbjct: 63 QHVV-NFTDVDDKIINRAHALGRDPKELAESYI 94
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA+ + D++RR LE+ + V++ TD+DDKIIN+A++L D K +A+ Y +
Sbjct: 40 GHAMSAIVFDVVRRYLEYRGYAVQHVVN-FTDVDDKIINRAHALGRDPKELAESYIAEFL 98
>gi|385856089|ref|YP_005902602.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240355]
gi|325205030|gb|ADZ00484.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240355]
Length = 473
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 105/186 (56%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG+GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAF------HNQSQW---------VNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS HN +Q V YWLH G +R
Sbjct: 218 GDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGHNHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 96
>gi|148657145|ref|YP_001277350.1| cysteinyl-tRNA synthetase [Roseiflexus sp. RS-1]
gi|148569255|gb|ABQ91400.1| cysteinyl-tRNA synthetase [Roseiflexus sp. RS-1]
Length = 478
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 106/183 (57%), Gaps = 13/183 (7%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y E+ E +E V R +E +P IQ FI L++T AY+ D VYF + + P
Sbjct: 93 YIAEFLEDLEALNVKRAHIYPRATETMPEIQQFITRLIETGHAYV-VDGDVYFRIATVPD 151
Query: 362 YFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
Y KL R+ I+ K +P DFALWK+AKPGEP+++S WG GRPGWHIECSA
Sbjct: 152 YGKLSRRSLDDMIAGNRISVDERKENPADFALWKAAKPGEPFWDSPWGPGRPGWHIECSA 211
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL----RGTDGT 470
M G Q+D+H GG DL FPHHENE AQ+ + + + YW+H G L R DGT
Sbjct: 212 MNLAHLGEQIDIHGGGADLIFPHHENEIAQTESLTGKP-FARYWMHNGMLQIQTRLADGT 270
Query: 471 RRL 473
+L
Sbjct: 271 YKL 273
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I+IYN +T+T PF +K Y CG TVYD HIGHA+ + D++RR LE+ +
Sbjct: 3 IRIYNTLTRTLEPFETLEPGVVKMYVCGVTVYDRAHIGHAMSAIVFDVVRRYLEYRGYAV 62
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
V+ + TD+DDKIIN+A + D K +A+ Y
Sbjct: 63 QHVV-NFTDVDDKIINRAREIGRDPKELAESYI 94
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA+ + D++RR LE+ + V++ TD+DDKIIN+A + D K +A+ Y +
Sbjct: 40 GHAMSAIVFDVVRRYLEYRGYAVQHVVN-FTDVDDKIINRAREIGRDPKELAESYIAEFL 98
>gi|406037361|ref|ZP_11044725.1| cysteinyl-tRNA ligase [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 473
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 100/173 (57%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E G + P A + +E+I +QS I TL+D AY ++ VYF+V F Y +L G
Sbjct: 100 EDAANLGCVLPDEAPKATEYIDQMQSMIATLVDNGTAYPAANGDVYFEVTKFDKYGRLSG 159
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R +E + K+ PFDF LWK AK EP + S WG GRPGWHIECSAM++
Sbjct: 160 RKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPAWASPWGNGRPGWHIECSAMSTC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A + Q+VNYW+H G + DG +
Sbjct: 220 CLGNHFDIHGGGSDLMFPHHENEIAQSEASTGE-QYVNYWMHVGFI-NVDGEK 270
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ + + + Y CG TVYD HIGHA V D IIR + + +
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVR- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I ++TDIDDKII +AN E + + R+
Sbjct: 65 -YIRNITDIDDKIIARANENGETIQQLTARF 94
>gi|340507692|gb|EGR33616.1| hypothetical protein IMG5_047960 [Ichthyophthirius multifiliis]
Length = 365
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 119/188 (63%), Gaps = 16/188 (8%)
Query: 310 MEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH-----YFK 364
M+ + P RVSE++P I FIQ ++ AY S++SVYF+V+ F + Y K
Sbjct: 1 MKGLNIQKPDIIARVSEYVPEIIQFIQKIIQNGYAY-SSNNSVYFNVEKFHNSPNHIYAK 59
Query: 365 LWGRNENITQ-----HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHF 419
L ++N Q + K+S DF LWK +K EP ++S WG+GRPGWHIECS+MAS+F
Sbjct: 60 LNSNSQNQEQIDDDNNQDKKSSKDFVLWKKSKENEPKWDSPWGQGRPGWHIECSSMASNF 119
Query: 420 FGGQVDLHTGGIDLKFPHHENEEAQSCAFHN---QSQWVNYWLHTGHL--RGTDGTRRLR 474
FG ++D+H GG DLKFPHH+NE AQS AF N +QWVNY+LHTGHL G ++ L+
Sbjct: 120 FGDKIDIHMGGQDLKFPHHDNEIAQSEAFFNCQVCNQWVNYFLHTGHLNIEGLKMSKSLK 179
Query: 475 AARFITNL 482
I NL
Sbjct: 180 NFISIQNL 187
>gi|301059000|ref|ZP_07199966.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
gi|300446881|gb|EFK10680.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
Length = 484
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 97/166 (58%), Gaps = 13/166 (7%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI-GSDHSVYFDVDSFPHYFK 364
++E M K GVL R ++++ + QTL+D AY G D VYF VDS+P Y
Sbjct: 97 FYEDMGKLGVLKADVEPRATDYVEDMIEMTQTLMDRGYAYTEGGD--VYFSVDSYPGYGS 154
Query: 365 LWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L GRN + KR P DF LWKSAKPGEP + S WG GRPGWH+ECS M++
Sbjct: 155 LSGRNLEDMRAGSRVAVDDRKRHPMDFVLWKSAKPGEPQWPSPWGPGRPGWHLECSVMSN 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQS-CAFHNQSQWVNYWLHTG 462
G D+H GG DL FPHHENE AQS CA N ++ YW+H G
Sbjct: 215 RHLGPTFDIHGGGRDLLFPHHENERAQSMCA--NDGEFARYWVHNG 258
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN + K F N + Y CG TVYD HIGHA + D++ R YF
Sbjct: 3 LKLYNSSIRKKEVFKPLNDGKVGLYVCGVTVYDLCHIGHARSTIVFDVLAR----YFRAR 58
Query: 92 SIVISSV---TDIDDKIINKANSLKEDYKTVAKRY 123
++ V TDIDDKII +A LK+ K +A+ +
Sbjct: 59 GYDVTYVRNFTDIDDKIIERAKLLKKAPKELAREF 93
>gi|237756267|ref|ZP_04584825.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691568|gb|EEP60618.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 487
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 97/165 (58%), Gaps = 9/165 (5%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
EYF+ EKF + P RV+ IP I +FIQ L+D AY +D VYF V F Y K
Sbjct: 96 EYFDDAEKFRIEPADVEPRVTTHIPDIINFIQKLVDAGYAY-EADGDVYFSVRKFKEYGK 154
Query: 365 LWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L R+ I K+ P DFALWKSAK GEP++ES WGKGRPGWH EC AM
Sbjct: 155 LSKRSIDELLAGARIEPGEKKKDPLDFALWKSAKAGEPYWESPWGKGRPGWHTECCAMIF 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G +D+H GG+DL FPHHENE AQ+ A + + YW+H G
Sbjct: 215 KHLGETIDIHGGGLDLTFPHHENEIAQAEALTGKP-FARYWIHNG 258
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T K F +K Y CG TVYD H+GH + D+IRR L Y +
Sbjct: 3 LKIYNTLTGKKEDFAPIKPGEVKIYTCGVTVYDYNHVGHGRSLIVFDMIRRYL-RYLGYN 61
Query: 92 SIVISSVTDIDDKIINKANS 111
I + + TD+DDKIIN+A +
Sbjct: 62 VIFVRNFTDVDDKIINRAKN 81
>gi|253702469|ref|YP_003023658.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
gi|259511834|sp|C6E7P0.1|SYC_GEOSM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|251777319|gb|ACT19900.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
Length = 480
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 102/170 (60%), Gaps = 11/170 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY-IGSDHSVYFDVDSF 359
R+ E+ M + + PT + +E IP I + +Q L+D AY GSD V++ VD F
Sbjct: 92 RFIKEFDNDMARLMLQLPTFQPKATEHIPEIINLVQKLIDKGFAYQSGSD--VFYRVDRF 149
Query: 360 PHYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
Y KL RN Q K P DFALWK AKPGEP++ES WG+GRPGWHIEC
Sbjct: 150 EGYLKLSKRNLEDMQAGARIDVDERKEHPMDFALWKGAKPGEPYWESPWGQGRPGWHIEC 209
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
SAM++ F G +D+H GG DL FPHHENE AQS A + +V YWLH G
Sbjct: 210 SAMSTKFLGETLDIHGGGKDLIFPHHENEIAQSEAASGKP-FVKYWLHNG 258
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDII-RRILEHYFHI 90
+++YN +T +K F+ N + Y CG TVYD HIGHA NV D+I R +L +
Sbjct: 3 LRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRHLLSKGLEV 62
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TDIDDKIIN+AN Y +++R+
Sbjct: 63 --TYVRNYTDIDDKIINRANRDGVAYNEISERF 93
>gi|227834035|ref|YP_002835742.1| cysteinyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
gi|227455051|gb|ACP33804.1| Cysteinyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
Length = 473
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 111/179 (62%), Gaps = 21/179 (11%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI-------GSDHS--V 352
YE E+ ++ GVLPP+ R + F+ + ++Q L+D AY G D S V
Sbjct: 94 YEREFTKAYNTLGVLPPSVEPRATGFVTQMVEYMQRLIDAGFAYAVPNGTAGGEDDSGSV 153
Query: 353 YFDVDSF-----PHYFKLWGR-----NENITQHAVKRSPFDFALWKSAKPGEPWYESAWG 402
YFDV ++ Y L G + T +A KRSP DFALWK+AKPGEP + + WG
Sbjct: 154 YFDVAAWNATEGSDYGSLSGNRVEEMEQGETDNAGKRSPQDFALWKAAKPGEPSWPTPWG 213
Query: 403 KGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHT 461
+GRPGWH+ECSAM++++ GG+ D+H GG+DL+FPHHENE AQS A + ++ NYW+H
Sbjct: 214 RGRPGWHLECSAMSTYYLGGEFDIHCGGLDLQFPHHENEIAQSHAAGD--KFANYWMHN 270
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++I++ T+++ F H Y CG T PHIGH V DI+RR L +
Sbjct: 4 LRIFDTATRSQREFEPVRPGHASIYLCGATPQSQPHIGHLRSGVAFDILRRWLSAQGYDV 63
Query: 92 SIVISSVTDIDDKIINKA 109
++V +VTDIDDKI+ KA
Sbjct: 64 ALV-RNVTDIDDKILTKA 80
>gi|262183479|ref|ZP_06042900.1| cysteinyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
Length = 470
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 111/179 (62%), Gaps = 21/179 (11%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI-------GSDHS--V 352
YE E+ ++ GVLPP+ R + F+ + ++Q L+D AY G D S V
Sbjct: 91 YEREFTKAYNTLGVLPPSVEPRATGFVTQMVEYMQRLIDAGFAYAVPNGTAGGEDDSGSV 150
Query: 353 YFDVDSF-----PHYFKLWGR-----NENITQHAVKRSPFDFALWKSAKPGEPWYESAWG 402
YFDV ++ Y L G + T +A KRSP DFALWK+AKPGEP + + WG
Sbjct: 151 YFDVAAWNATEGSDYGSLSGNRVEEMEQGETDNAGKRSPQDFALWKAAKPGEPSWPTPWG 210
Query: 403 KGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHT 461
+GRPGWH+ECSAM++++ GG+ D+H GG+DL+FPHHENE AQS A + ++ NYW+H
Sbjct: 211 RGRPGWHLECSAMSTYYLGGEFDIHCGGLDLQFPHHENEIAQSHAAGD--KFANYWMHN 267
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++I++ T+++ F H Y CG T PHIGH V DI+RR L +
Sbjct: 1 MRIFDTATRSQREFEPVRPGHASIYLCGATPQSQPHIGHLRSGVAFDILRRWLSAQGYDV 60
Query: 92 SIVISSVTDIDDKIINKA 109
++V +VTDIDDKI+ KA
Sbjct: 61 ALV-RNVTDIDDKILTKA 77
>gi|417951842|ref|ZP_12594927.1| cysteinyl-tRNA synthetase [Vibrio splendidus ATCC 33789]
gi|342803794|gb|EGU39143.1| cysteinyl-tRNA synthetase [Vibrio splendidus ATCC 33789]
Length = 461
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 93/152 (61%), Gaps = 8/152 (5%)
Query: 318 PTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENITQ--- 374
P R +EFI I ++ L++ AY+ S+ V F+V F Y KL ++ Q
Sbjct: 108 PDVEPRATEFITEIIELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLEQLQAGA 167
Query: 375 ----HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGG 430
+ KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S G D+H GG
Sbjct: 168 RVDVESAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGG 227
Query: 431 IDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
DL+FPHHENE AQSC H +Q+VN W+H+G
Sbjct: 228 SDLQFPHHENEIAQSCCAHG-TQYVNTWMHSG 258
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL--IFKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +AN E ++ +R + F L+ K P +
Sbjct: 61 LTFVRNITDIDDKIIKRANENGESCDSLTERLIGEMHADFDALNMKRPDVEPRATEFITE 120
Query: 150 VKLDIIRRILEHYF 163
+ ++++ +++E F
Sbjct: 121 I-IELVEKLIERGF 133
>gi|313667586|ref|YP_004047870.1| cysteinyl-trna synthetase [Neisseria lactamica 020-06]
gi|313005048|emb|CBN86480.1| cysteinyl-trna synthetase (ec 6.1.1.16) (cysteine--trna ligase)
(cysrs) [Neisseria lactamica 020-06]
Length = 473
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WGKGRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGKGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCA-------------FHNQS--QWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS H QS V YWLH G +R
Sbjct: 218 GNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
+YN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 LYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 96
>gi|300114660|ref|YP_003761235.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
gi|299540597|gb|ADJ28914.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
Length = 495
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 101/175 (57%), Gaps = 8/175 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY E +LPP R R +E + I + ++ LL+ AY G + +Y+DV F
Sbjct: 91 RYIQALHEDEASLQILPPDREPRATESMEAILAMVRQLLEQGYAYQGENGDIYYDVSHFE 150
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y L G++ E + + K P DF LWK+AKP EP +ES WG GRPGWHIECS
Sbjct: 151 GYGALSGKHLEDLRAGERVQVNEAKTDPLDFVLWKAAKPDEPAWESPWGPGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTD 468
AM+ G D+H GG DL+FPHHENE AQS A S++VNYW+H G +R D
Sbjct: 211 AMSIQELGVHFDIHGGGQDLQFPHHENEIAQSEAA-TGSKFVNYWMHNGFVRLDD 264
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHY-FHI 90
++IYN +T+ K FI ++ Y CG TVYD H+GHA V D++ R L F +
Sbjct: 2 LRIYNSLTRKKEEFIPIESGKVRMYVCGMTVYDLCHVGHARVMVVFDVVARYLRASGFEV 61
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ + ++TDIDDKII++AN E + RY L
Sbjct: 62 --MYVRNITDIDDKIIHRANEKGESIHALTARYIQAL 96
>gi|333896167|ref|YP_004470041.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333111432|gb|AEF16369.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 464
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 104/171 (60%), Gaps = 9/171 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY EYF+ + G+ T R +E I I F++ L+D AY D +VY+D F
Sbjct: 90 RYIEEYFKDADSLGIKRATFHPRATENIKEIIEFVKKLIDKGFAY-EKDGNVYYDTTKFK 148
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL +N I + K++P DF LWK+AK GEP+++S WGKGRPGWHIECS
Sbjct: 149 DYGKLSHKNIDELKAGARIEVNEDKKNPTDFVLWKAAKEGEPYWDSPWGKGRPGWHIECS 208
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
M++ F G +D+H GG DL FPHHENE AQS A N +++ YW+H G+L
Sbjct: 209 TMSTKFLGKTLDIHAGGPDLIFPHHENEIAQSEA-ANDAEFAKYWMHIGYL 258
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F+ N N + Y CGPTVY+ HIG+A + D +RR LE Y
Sbjct: 1 MKIYNTLTRKKEEFVPLNDNVVNMYVCGPTVYNFIHIGNARAFIVFDTVRRYLE-YKGYK 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TDIDDK+I +++ K +A RY
Sbjct: 60 VNYVQNFTDIDDKLIKRSHEENTTVKELADRY 91
>gi|418008850|ref|ZP_12648700.1| cysteinyl-tRNA synthetase [Lactobacillus casei UW4]
gi|410545575|gb|EKQ19866.1| cysteinyl-tRNA synthetase [Lactobacillus casei UW4]
Length = 444
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 108/193 (55%), Gaps = 15/193 (7%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ + E G+ P T R S+ IP I F+Q L+D + AY D VY+ F
Sbjct: 67 RFIDAFMEDTTALGIEPATAHPRASQMIPDIIDFVQDLIDKEYAY-AVDGDVYYRARKFK 125
Query: 361 HYFKLWGRN-----ENITQH------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWH 409
HY +L +N E +QH A K P DFALWK AKPGE +ES WGKGRPGWH
Sbjct: 126 HYGELSHQNVDELEEGASQHITQDELAKKEDPIDFALWKVAKPGEISWESPWGKGRPGWH 185
Query: 410 IECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR-GTD 468
IECS M++ G D+H GG DL+FPHHENE AQS A Q+V YW+H G + G D
Sbjct: 186 IECSVMSTKLLGDTFDIHGGGQDLEFPHHENEIAQSEA-KTDKQFVRYWMHNGFVTIGED 244
Query: 469 GTRRLRA-ARFIT 480
+ ++ FIT
Sbjct: 245 DEKMSKSLGNFIT 257
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKED 115
Y CGPTVY+ HIG+A + D IRR E Y +S+ TD+DDKIIN A+ E
Sbjct: 2 YVCGPTVYNYIHIGNARSAIAFDTIRRYFE-YRGYKVTYVSNFTDVDDKIINAAHKTGEA 60
Query: 116 YKTVAKRY 123
+A+R+
Sbjct: 61 PLDLAQRF 68
>gi|402570816|ref|YP_006620159.1| cysteinyl-tRNA synthetase [Desulfosporosinus meridiei DSM 13257]
gi|402252013|gb|AFQ42288.1| cysteinyl-tRNA synthetase [Desulfosporosinus meridiei DSM 13257]
Length = 452
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 100/171 (58%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y EYF+ ++ +LP T + +E IP + IQ L+D+ Y + VYF VD FP
Sbjct: 67 KYIDEYFKDAKELNLLPATVHPKATEHIPEMIEIIQGLIDSGLGY-EVEGDVYFAVDHFP 125
Query: 361 HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR + + KR P DFALWK AKPGEP +ES WG+GRPGWHIEC+
Sbjct: 126 DYGKLSGRTLDDMKAGARVEVDERKRHPMDFALWKKAKPGEPAWESPWGEGRPGWHIECT 185
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM+ + G D+H GG DL FPHHENE AQ+ + + +W+H L
Sbjct: 186 AMSLKYLGAGFDIHGGGEDLSFPHHENEIAQTEGYLKGKTFARHWMHNAFL 236
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKED 115
Y CGPT Y+ H G+A V D+IRR Y + + TDIDDKII + N D
Sbjct: 2 YVCGPTTYNYFHAGNARMFVVFDMIRRYF-IYKGFDVRYVQNFTDIDDKIIQRGNVEGMD 60
Query: 116 YKTVAKRYF---------LPLIFKILHQKVVGSIP 141
+ ++Y L L+ +H K IP
Sbjct: 61 PLALGQKYIDEYFKDAKELNLLPATVHPKATEHIP 95
>gi|188997490|ref|YP_001931741.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
gi|229558793|sp|B2V6B4.1|SYC_SULSY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|188932557|gb|ACD67187.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 487
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 97/165 (58%), Gaps = 9/165 (5%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
EYF+ EKF + P RV+ IP I +FIQ L+D AY +D VYF V F Y K
Sbjct: 96 EYFDDAEKFRIEPADIEPRVTTHIPDIINFIQKLVDAGYAY-EADGDVYFSVRKFKEYGK 154
Query: 365 LWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L R+ I K+ P DFALWKSAK GEP++ES WGKGRPGWH EC AM
Sbjct: 155 LSKRSIDELLAGARIEPGEKKKDPLDFALWKSAKAGEPYWESPWGKGRPGWHTECCAMIF 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G +D+H GG+DL FPHHENE AQ+ A + + YW+H G
Sbjct: 215 KHLGETIDIHGGGLDLTFPHHENEIAQAEALTGKP-FARYWIHNG 258
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T K F +K Y CG TVYD H+GH + D+IRR L Y +
Sbjct: 3 LKIYNTLTGKKEDFAPIKPGEVKIYTCGVTVYDYNHVGHGRSLIVFDMIRRYL-RYLGYN 61
Query: 92 SIVISSVTDIDDKIINKANS 111
I + + TD+DDKIIN+A +
Sbjct: 62 VIFVRNFTDVDDKIINRAKN 81
>gi|150399135|ref|YP_001322902.1| cysteinyl-tRNA synthetase [Methanococcus vannielii SB]
gi|166200152|sp|A6UP68.1|SYC_METVS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|150011838|gb|ABR54290.1| cysteinyl-tRNA synthetase [Methanococcus vannielii SB]
Length = 475
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ M+ V P +V+E IP I SFI L++ AY +D VYF+++ F Y KL
Sbjct: 96 FLNDMKTLNVKPADIYPKVTENIPEIISFIDKLIEKGFAY-KTDSGVYFEIEKFKDYGKL 154
Query: 366 WGRN-ENITQH------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
N EN+ + K++ FDFALWK+ K GEP+++S +G GRPGWHIECS M+
Sbjct: 155 SNINLENLISEDKLESKSEKKNRFDFALWKNKKSGEPYWKSPFGDGRPGWHIECSVMSMK 214
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAARF 478
+ G Q D+H GG DL FPHHENE AQS A+ ++ WVNYW+HTG + F
Sbjct: 215 YLGEQFDIHGGGRDLSFPHHENEIAQSSAYSGKN-WVNYWVHTGFVMVNGEKMSKSLGNF 273
Query: 479 IT 480
+T
Sbjct: 274 VT 275
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++IYN ITK++ F N +K Y CGPTVYD HIGH V DIIRR LEH +
Sbjct: 2 LRIYNTITKSEEVFKTLNNEEVKIYVCGPTVYDETHIGHGRTYVSFDIIRRYLEHIGYSV 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+VI + TDIDDKIIN+A +L K ++++Y
Sbjct: 62 KLVI-NFTDIDDKIINRALNLNVTPKKISEKY 92
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GH V DIIRR LEH + +VI+ TDIDDKIIN+A +L K ++++Y
Sbjct: 39 GHGRTYVSFDIIRRYLEHIGYSVKLVIN-FTDIDDKIINRALNLNVTPKKISEKY 92
>gi|374578926|ref|ZP_09652020.1| cysteinyl-tRNA synthetase [Desulfosporosinus youngiae DSM 17734]
gi|374415008|gb|EHQ87443.1| cysteinyl-tRNA synthetase [Desulfosporosinus youngiae DSM 17734]
Length = 452
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 102/171 (59%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y EYF+ + +LP T + +E IP + IQ L+D+ Y + VYF VD FP
Sbjct: 67 KYIEEYFKDAKALNLLPATIHPKATEHIPEMIEIIQGLIDSGLGY-EVEGDVYFAVDRFP 125
Query: 361 HYFKLWGRN-ENITQHAV------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR E++ A KR P DFALWK AKPGEP ++S WG+GRPGWHIEC+
Sbjct: 126 DYGKLSGRTLEDMKAGARVEVDERKRHPMDFALWKKAKPGEPAWQSPWGEGRPGWHIECT 185
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM+ + G D+H GG DL FPHHENE AQ+ + + +YW+H L
Sbjct: 186 AMSLKYLGAGFDIHGGGEDLAFPHHENEIAQTEGYLKGRTFAHYWMHNAFL 236
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKED 115
Y CGPT Y+ H G+A V D+IRR Y + + + TD+DDKII + + D
Sbjct: 2 YVCGPTTYNYFHAGNARMFVVFDMIRRYF-IYKGLDVRYVQNFTDVDDKIIQRGHVEGMD 60
Query: 116 YKTVAKRYF---------LPLIFKILHQKVVGSIP 141
+ ++Y L L+ +H K IP
Sbjct: 61 PLALGQKYIEEYFKDAKALNLLPATIHPKATEHIP 95
>gi|427420999|ref|ZP_18911182.1| cysteinyl-tRNA synthetase [Leptolyngbya sp. PCC 7375]
gi|425756876|gb|EKU97730.1| cysteinyl-tRNA synthetase [Leptolyngbya sp. PCC 7375]
Length = 496
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 95/174 (54%), Gaps = 14/174 (8%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY YF + + +L RV+E IP I IQ L AY D VY++V F
Sbjct: 92 RYIAAYFRDIRRLNILDADDYPRVTEHIPTIHQLIQALEQQGYAY-AIDGDVYYNVRQFA 150
Query: 361 HYFKLWGRNENITQHAV------------KRSPFDFALWKSAKPGEPWYESAWGKGRPGW 408
Y KL GRN + Q KR PFDFALWKSAKPGEP +ES WG GRPGW
Sbjct: 151 EYGKLSGRNLDQLQAGAGGRVGPDAPGQKKRDPFDFALWKSAKPGEPAWESPWGMGRPGW 210
Query: 409 HIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
HIECSAM G +D+H GG DL FPHHENE AQS A Q YWLH G
Sbjct: 211 HIECSAMIRARLGETIDIHGGGGDLVFPHHENEIAQSEALTGQPL-ARYWLHNG 263
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ ++N +T K PFI + + Y CG TVYD H+GHA + D++RR L+ +
Sbjct: 3 LTLHNTLTDRKEPFISIHPGRVVMYCCGVTVYDHCHLGHARSYMVWDVLRRYLQ-WCGYT 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVK 151
+ + TDIDDKI+++A + V+ RY I ++ +
Sbjct: 62 VRYVQNFTDIDDKILHRARVEGVTMQAVSDRYIAAYFRDIRRLNILDA------------ 109
Query: 152 LDIIRRILEHYFHIHSIV 169
D R+ EH IH ++
Sbjct: 110 -DDYPRVTEHIPTIHQLI 126
>gi|378756888|gb|EHY66912.1| cysteinyl-tRNA synthetase [Nematocida sp. 1 ERTm2]
Length = 528
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 105/179 (58%), Gaps = 17/179 (9%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+YE E+F+ M GV P TRVS+++ I +FI + + AY S+ SVYF+V+ +
Sbjct: 134 KYEQEFFDDMAALGVDLPNYTTRVSDYVDEIINFIVGIEEKGYAY-ESEGSVYFNVEKYK 192
Query: 361 HYFK---------------LWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGR 405
K L E K DF LWK++K GEP + S WG GR
Sbjct: 193 ETHKYPLMCNATTQEDQQSLLEEGEGKLTAGQKNRKEDFVLWKASKEGEPAWTSKWGPGR 252
Query: 406 PGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
PGWHIECSAMAS+ GG++D+H+GGIDL FPHH+NE AQS H + WV ++LHTGHL
Sbjct: 253 PGWHIECSAMASNIAGGRIDMHSGGIDLMFPHHDNEIAQSEG-HGLNNWVGHFLHTGHL 310
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 29 DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
++ +KIYN ITK K ++ KWY CGPTVYDS HIGHA + LDIIR+ LE YF
Sbjct: 12 ESKLKIYNTITKKKDELKMEG-YFFKWYTCGPTVYDSAHIGHARSYITLDIIRKTLERYF 70
Query: 89 HIHSIVISSVTDIDDKIINKANSLKE 114
I ++TDIDDKII KA E
Sbjct: 71 GYTITYIMNITDIDDKIILKAKETME 96
>gi|254229902|ref|ZP_04923306.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262394608|ref|YP_003286462.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|451970383|ref|ZP_21923610.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus E0666]
gi|151937606|gb|EDN56460.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262338202|gb|ACY51997.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|451933897|gb|EMD81564.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus E0666]
Length = 460
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 94/152 (61%), Gaps = 8/152 (5%)
Query: 318 PTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENITQ--- 374
P R ++FIP I +Q L++ AY+ + V F+V F Y KL ++ + Q
Sbjct: 108 PDIEPRATQFIPEIIELVQKLIERGFAYVADNGDVMFEVRKFDEYGKLSKQDLDQLQAGA 167
Query: 375 ----HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGG 430
KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S G D+H GG
Sbjct: 168 RVDVETAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGG 227
Query: 431 IDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
DL+FPHHENE AQSC H+ +++VN W+H+G
Sbjct: 228 SDLQFPHHENEIAQSCCAHD-TKYVNTWMHSG 258
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL--IFKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +A E ++ +R + F L+ K P +
Sbjct: 61 LTFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMHADFDALNMKRPDIEPRATQFIPE 120
Query: 150 VKLDIIRRILEHYF 163
+ ++++++++E F
Sbjct: 121 I-IELVQKLIERGF 133
>gi|424807047|ref|ZP_18232455.1| cysteinyl-tRNA synthetase [Vibrio mimicus SX-4]
gi|342324989|gb|EGU20769.1| cysteinyl-tRNA synthetase [Vibrio mimicus SX-4]
Length = 459
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R + +I I + +Q L++ AY+ + V F+V + Y K
Sbjct: 95 EMYADFDALNIKRPDVGPRATAYIEEIIALVQRLIERGFAYVADNGDVMFEVGKYDEYGK 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ Q A KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSKQDLEQLQAGARVDVEAAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 215 SILGNHFDIHGGGSDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLI--FKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +A E +++ +R + F L+ K P R A
Sbjct: 61 LTFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVGP-RATAYIE 119
Query: 150 VKLDIIRRILEHYF 163
+ +++R++E F
Sbjct: 120 EIIALVQRLIERGF 133
>gi|359428272|ref|ZP_09219308.1| cysteinyl-tRNA synthetase [Acinetobacter sp. NBRC 100985]
gi|358236288|dbj|GAB00847.1| cysteinyl-tRNA synthetase [Acinetobacter sp. NBRC 100985]
Length = 473
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 100/173 (57%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E G + P A + +E+I +Q+ I TL+D AY ++ VYF+V F Y +L G
Sbjct: 100 EDAANLGCVAPDEAPKATEYIDQMQNMISTLVDKGAAYPATNGDVYFEVTKFDKYGRLSG 159
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R +E + K+ PFDF LWK AK EP + S WG GRPGWHIECSAM++
Sbjct: 160 RKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPAWASPWGNGRPGWHIECSAMSTC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A + Q+VNYW+H G + DG +
Sbjct: 220 CLGNHFDIHGGGSDLMFPHHENEIAQSEASTGE-QYVNYWMHVGFI-NVDGEK 270
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ + + + Y CG TVYD HIGHA V D IIR + + +
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVR- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I ++TDIDDKII +AN E + + R+
Sbjct: 65 -YIRNITDIDDKIIARANENGETIQQLTARF 94
>gi|262376233|ref|ZP_06069463.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
gi|262308834|gb|EEY89967.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
Length = 473
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 101/173 (58%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E K G L P A + +++I +Q+ I L+D AY ++ VYF+V+ F Y +L G
Sbjct: 100 EDFAKLGCLAPDVAPKATDYIDQMQAMIGNLVDKGTAYPSNNGDVYFEVEKFAKYGRLSG 159
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R +E + K+ PFDF LWK AK EP + S WG GRPGWHIECSAM++
Sbjct: 160 RKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A + Q+VNYW+H G + DG +
Sbjct: 220 CLGNHFDIHGGGADLTFPHHENEIAQSEASTGE-QYVNYWMHAGFI-NVDGEK 270
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ + + + Y CG TVYD HIGHA V D IIR + + +
Sbjct: 6 LYNSEQRKKVEFVPRVEGQIDLYVCGMTVYDYCHIGHARTVVAFDYIIRFLRSQGWKVK- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ ++TDIDDKII +AN E + R+
Sbjct: 65 -YVRNITDIDDKIIKRANENGESISELTSRF 94
>gi|159905981|ref|YP_001549643.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C6]
gi|229558715|sp|A9AAN8.1|SYC_METM6 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|159887474|gb|ABX02411.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C6]
Length = 476
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ M V P +V+E IP I +FI+ L++ AY +++ VYF+V F +Y KL
Sbjct: 96 FLNDMTTLKVKPADIYPKVTEHIPEIIAFIEKLIEKGFAY-ETENGVYFEVKKFENYGKL 154
Query: 366 WGRNEN-------ITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
N I K++P DFALWK+AKPGEP ++S + +GRPGWHIECSAM+S
Sbjct: 155 SNINLEDLFSGVRIETSEEKKNPEDFALWKTAKPGEPKWKSPFVEGRPGWHIECSAMSSK 214
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAARF 478
+ G Q D+H GG DL FPHHENE AQS A+ + WVNYWLHTG + F
Sbjct: 215 YLGEQFDIHGGGRDLSFPHHENEIAQSVAYSGKD-WVNYWLHTGFVMVNGEKMSKSLGNF 273
Query: 479 IT 480
+T
Sbjct: 274 VT 275
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T+ + F N+ +K Y CGPTVYD H+GH V DIIRR LEH +
Sbjct: 2 LKVYNTLTRKEEEFKPLNEKEVKMYVCGPTVYDHTHLGHGRTYVSFDIIRRYLEHIGYTV 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
++VI + TDIDDKII +AN ++ K +++++
Sbjct: 62 NLVI-NFTDIDDKIIKRANENGKNPKELSEQF 92
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
GH V DIIRR LEH + ++VI+ TDIDDKII +AN ++ K +++++
Sbjct: 39 GHGRTYVSFDIIRRYLEHIGYTVNLVIN-FTDIDDKIIKRANENGKNPKELSEQF 92
>gi|359419681|ref|ZP_09211630.1| cysteinyl-tRNA synthetase [Gordonia araii NBRC 100433]
gi|358244411|dbj|GAB09699.1| cysteinyl-tRNA synthetase [Gordonia araii NBRC 100433]
Length = 446
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 102/166 (61%), Gaps = 8/166 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+E + ++ GVLPP+ R + FIP + ++Q L+D AY+ +D +VYFDV S P
Sbjct: 75 HERAFDDAYRALGVLPPSAEPRATGFIPQMIGYMQRLIDRGHAYV-ADGNVYFDVQSLPT 133
Query: 362 YFKLWGR-----NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
Y L G ++ + KR P DF LWK+AK GEP +++ WG GRPGWH+ECSAMA
Sbjct: 134 YGALSGHKLDDVHQGESAGTGKRDPRDFTLWKAAKEGEPSWDTPWGPGRPGWHLECSAMA 193
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
+ G + D+H GG+DL FPHHENE AQS + + YWLH G
Sbjct: 194 TSLLGPEFDIHCGGMDLVFPHHENEIAQSHGAGD--GFAQYWLHNG 237
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKAN 110
Y CG TV PHIGH + D++RR L H + + + +VTDIDDKI+ KA+
Sbjct: 9 YLCGATVQGVPHIGHVRSGIAFDVLRRWLAHEGN-DVLFVRNVTDIDDKILRKAD 62
>gi|357057467|ref|ZP_09118327.1| cysteinyl-tRNA synthetase [Selenomonas infelix ATCC 43532]
gi|355375371|gb|EHG22658.1| cysteinyl-tRNA synthetase [Selenomonas infelix ATCC 43532]
Length = 475
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 101/173 (58%), Gaps = 10/173 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY YF++M+ V RVSE + IQ I+TL+ AY+ VY+ V++F
Sbjct: 91 RYIAAYFKAMDALNVRRADVFPRVSETMADIQRMIETLIARGYAYVTEAGDVYYRVEAFD 150
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
HY L GR+ + +A K P DFALWK+AKPGEP +ES WGKGRPGWHIECS
Sbjct: 151 HYGCLSGRSLDDMEAGARVEVNAAKEHPMDFALWKAAKPGEPSWESPWGKGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQS--CAFHNQSQWVNYWLHTGHL 464
AM+ + G D H GG DL FPHHENE AQ+ C ++ YWLH G +
Sbjct: 211 AMSVKYLGDVFDFHGGGNDLIFPHHENEIAQAEPC-IDGDEKFARYWLHNGFI 262
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 23/178 (12%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ +YN +T+ K F + + Y CG T Y+ PHIG+A V D+IRR L +
Sbjct: 2 LTVYNTMTRKKEEFHPLREGEVSIYCCGVTPYNDPHIGNARPFVTWDVIRRYLARKGY-K 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILH------------------ 133
I + TD+DDKIIN AN +K ++ RY + FK +
Sbjct: 61 VRYIQNFTDVDDKIINAANREGVTWKEISDRY-IAAYFKAMDALNVRRADVFPRVSETMA 119
Query: 134 --QKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKE 189
Q+++ ++ RG+A D+ R+ E + H + S+ D++ + N+ KE
Sbjct: 120 DIQRMIETLIARGYAYVTEAGDVYYRV-EAFDHYGCLSGRSLDDMEAGARVEVNAAKE 176
>gi|254492720|ref|ZP_05105891.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
gi|268595732|ref|ZP_06129899.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
gi|268597919|ref|ZP_06132086.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
gi|268600306|ref|ZP_06134473.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
gi|268602538|ref|ZP_06136705.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
gi|268681087|ref|ZP_06147949.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
gi|268685567|ref|ZP_06152429.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
gi|291044895|ref|ZP_06570604.1| cysteinyl-tRNA synthetase CysS [Neisseria gonorrhoeae DGI2]
gi|293397970|ref|ZP_06642176.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae F62]
gi|226511760|gb|EEH61105.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
gi|268549121|gb|EEZ44539.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
gi|268551707|gb|EEZ46726.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
gi|268584437|gb|EEZ49113.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
gi|268586669|gb|EEZ51345.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
gi|268621371|gb|EEZ53771.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
gi|268625851|gb|EEZ58251.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
gi|291011789|gb|EFE03785.1| cysteinyl-tRNA synthetase CysS [Neisseria gonorrhoeae DGI2]
gi|291611916|gb|EFF40985.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae F62]
Length = 476
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 106/196 (54%), Gaps = 23/196 (11%)
Query: 298 FNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVD 357
N R+ E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V
Sbjct: 91 LNARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVR 150
Query: 358 SFPHYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHI 410
F Y +L G++ E + KR P DF LWK+AK GEP +ES WG GRPGWHI
Sbjct: 151 EFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHI 210
Query: 411 ECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCA-------------FHNQS--QWV 455
ECSAM+ + FG D+H GG DL+FPHHENE AQS H QS V
Sbjct: 211 ECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHV 270
Query: 456 NYWLHTGHLRGTDGTR 471
YWLH G +R DG +
Sbjct: 271 KYWLHNGFIR-VDGEK 285
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 7 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 66
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 67 V-RNITDIDDKIIARAAENGETIGELNARFIQAM 99
>gi|330830124|ref|YP_004393076.1| Cysteinyl-tRNA synthetase [Aeromonas veronii B565]
gi|423209170|ref|ZP_17195724.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER397]
gi|328805260|gb|AEB50459.1| Cysteinyl-tRNA synthetase [Aeromonas veronii B565]
gi|404619015|gb|EKB15935.1| cysteinyl-tRNA synthetase [Aeromonas veronii AER397]
Length = 458
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 96/159 (60%), Gaps = 8/159 (5%)
Query: 311 EKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNE 370
+ G++ P R ++ I I +Q+LL+ + AY+ + V F V+S+ Y KL G++
Sbjct: 101 DALGMVRPDIEPRATQHIEEIIELVQSLLEKEHAYVADNGDVMFIVESYADYGKLSGQDL 160
Query: 371 NITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQ 423
Q KR+P DF LWK +KPGEP +ES WG GRPGWHIECSAM S G
Sbjct: 161 EQLQAGARVDVVDAKRNPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNH 220
Query: 424 VDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
D+H GG DL+FPHHENE AQSC H +VN W+H+G
Sbjct: 221 FDIHGGGSDLQFPHHENEIAQSCCAHG-GDYVNTWMHSG 258
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 14/140 (10%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYL-RYAGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVK 151
+ ++TD+DDKII +A + + L ++++G + A+ V+
Sbjct: 61 LTYVRNITDVDDKIIKRAAETR-------------VTCDELTERLIGDMHADFDALGMVR 107
Query: 152 LDIIRRILEHYFHIHSIVIS 171
DI R +H I +V S
Sbjct: 108 PDIEPRATQHIEEIIELVQS 127
>gi|194099737|ref|YP_002002872.1| protein CysS [Neisseria gonorrhoeae NCCP11945]
gi|385336681|ref|YP_005890628.1| hypothetical protein NGTW08_1810 [Neisseria gonorrhoeae
TCDC-NG08107]
gi|193935027|gb|ACF30851.1| CysS [Neisseria gonorrhoeae NCCP11945]
gi|317165224|gb|ADV08765.1| hypothetical protein NGTW08_1810 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 475
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 106/196 (54%), Gaps = 23/196 (11%)
Query: 298 FNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVD 357
N R+ E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V
Sbjct: 90 LNARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVR 149
Query: 358 SFPHYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHI 410
F Y +L G++ E + KR P DF LWK+AK GEP +ES WG GRPGWHI
Sbjct: 150 EFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHI 209
Query: 411 ECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCA-------------FHNQS--QWV 455
ECSAM+ + FG D+H GG DL+FPHHENE AQS H QS V
Sbjct: 210 ECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHV 269
Query: 456 NYWLHTGHLRGTDGTR 471
YWLH G +R DG +
Sbjct: 270 KYWLHNGFIR-VDGEK 284
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 6 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 65
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 66 V-RNITDIDDKIIARAAENGETIGELNARFIQAM 98
>gi|344344279|ref|ZP_08775143.1| cysteinyl-tRNA synthetase [Marichromatium purpuratum 984]
gi|343804236|gb|EGV22138.1| cysteinyl-tRNA synthetase [Marichromatium purpuratum 984]
Length = 462
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 94/165 (56%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E GVL PT R + I IQ+ + TL+D AY + VY+ V FP Y KL G
Sbjct: 98 EDAAALGVLAPTSEPRATAHIDEIQTMVATLIDKGLAYAADNGDVYYAVSRFPGYGKLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ + KR P DFALWK AKPGEP + S WG+GRPGWHIECSAM++
Sbjct: 158 KDPQDLRAGARVEVDEAKRDPLDFALWKGAKPGEPSWSSPWGEGRPGWHIECSAMSTCCL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS + + W+H G +R
Sbjct: 218 GNHFDIHGGGADLQFPHHENEIAQSEGATGEP-FAEVWMHNGFVR 261
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++I+N +T+ K PF ++ Y CG TVYD H+GHA V D++ R L
Sbjct: 2 LQIHNSLTRQKTPFQPLEPGKVRMYVCGMTVYDYCHLGHARVMVVFDVVYRYL-RALGYE 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TDIDDKII +A E + +R+ +
Sbjct: 61 VTYVRNITDIDDKIIRRAAENGESCAALTERFIAAM 96
>gi|215697564|dbj|BAG91558.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 100/161 (62%), Gaps = 11/161 (6%)
Query: 310 MEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY-IGSDHSVYFDVDSFPHYFKLWGR 368
M LPP+ RVS+ I I + I+ ++D AY IG D VYF V++FP Y L GR
Sbjct: 1 MANLHCLPPSVEPRVSDHIDQIINMIKQIIDNDCAYAIGGD--VYFSVENFPEYGDLSGR 58
Query: 369 -------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFG 421
E + K++P DFALWK+AK GEP ++S WG GRPGWHIECSAM++H+ G
Sbjct: 59 KLDDNRAGERVAVDERKKNPADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLG 118
Query: 422 GQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
D+H GG DL FPHHENE AQS A S +NYW+H G
Sbjct: 119 HSFDIHGGGEDLIFPHHENEIAQSRAACCDSS-INYWIHNG 158
>gi|383457378|ref|YP_005371367.1| cysteinyl-tRNA synthetase [Corallococcus coralloides DSM 2259]
gi|380732503|gb|AFE08505.1| cysteinyl-tRNA synthetase [Corallococcus coralloides DSM 2259]
Length = 489
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/171 (47%), Positives = 100/171 (58%), Gaps = 9/171 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ + E + P + RVSE IP I + IQTL+D AY + VYF VD
Sbjct: 95 RFVEAFREDARALHLREPDVSPRVSETIPEIVAIIQTLVDKGYAY-EAKGDVYFAVDKDE 153
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL RN E + +KR P DFALWK+AKPGEP ++S WGKGRPGWHIECS
Sbjct: 154 DYAKLSKRNLDDLCQGERVQPGDLKRQPLDFALWKAAKPGEPSWDSPWGKGRPGWHIECS 213
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM+ F G D+H G +DL FPHHENE AQS + Q+ YW+H G L
Sbjct: 214 AMSEKFLGRTFDIHGGALDLIFPHHENEIAQSESATGQTM-AKYWMHCGFL 263
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I+++N ++ K P +K Y CGPTVY HIG+A D++ R L Y
Sbjct: 6 IRLFNTMSMQKEPLEPLVPGEVKVYVCGPTVYSYIHIGNARTFTSFDVVVRYL-RYRGFK 64
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKII A+ E +A R+
Sbjct: 65 VTYVRNYTDVDDKIIKAAHETGEAPVDLASRF 96
>gi|379717862|ref|YP_005306198.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
TIGB03]
gi|379726465|ref|YP_005318651.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
TI0902]
gi|377827914|gb|AFB81162.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
TI0902]
gi|377829539|gb|AFB79618.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
TIGB03]
Length = 459
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 97/161 (60%), Gaps = 8/161 (4%)
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNEN 371
+ +L P++ R +E IP + + I+TL+ AY G++ V++ V F Y KL +N
Sbjct: 101 RLNILKPSKEPRATETIPEMVAMIETLIKKGYAYQGANSDVFYRVTKFADYGKLSKQNLE 160
Query: 372 ITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQV 424
Q K +P DF LWK AK GEP ++S WG GRPGWHIECSAM+ G
Sbjct: 161 ALQQGSRVDVVEEKENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTF 220
Query: 425 DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
D+H GG DL+FPHHENE AQS A N+ + NYWLH+G ++
Sbjct: 221 DIHAGGSDLRFPHHENEIAQSEAC-NECTFANYWLHSGMVK 260
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 35 YNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIV 94
YN ++ K F N +K YACG TVYD HIGHA + D+I R + Y +
Sbjct: 4 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFK-YRGYDVTL 62
Query: 95 ISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +AN E + +R
Sbjct: 63 VRNITDIDDKIIKRANENGESTTELVER 90
>gi|187931126|ref|YP_001891110.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|229558635|sp|B2SFH9.1|SYC_FRATM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187712035|gb|ACD30332.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 459
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 97/161 (60%), Gaps = 8/161 (4%)
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNEN 371
+ +L P++ R +E IP + + I+TL+ AY G++ V++ V F Y KL +N
Sbjct: 101 RLNILKPSKEPRATETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLE 160
Query: 372 ITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQV 424
Q K +P DF LWK AK GEP ++S WG GRPGWHIECSAM+ G
Sbjct: 161 ALQQGSRVDVVEEKENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGNTF 220
Query: 425 DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
D+H GG DL+FPHHENE AQS A N+ + NYWLH+G ++
Sbjct: 221 DIHAGGSDLRFPHHENEIAQSEAC-NECTFANYWLHSGMVK 260
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 35 YNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIV 94
YN ++ K F N +K YACG TVYD HIGHA + D+I R + Y +
Sbjct: 4 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFK-YRGYDVTL 62
Query: 95 ISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++T+IDDKII +AN E + +R
Sbjct: 63 VRNITNIDDKIIKRANENGESTTELVER 90
>gi|423207191|ref|ZP_17193747.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC34]
gi|404620258|gb|EKB17155.1| cysteinyl-tRNA synthetase [Aeromonas veronii AMC34]
Length = 458
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 98/159 (61%), Gaps = 8/159 (5%)
Query: 311 EKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRN- 369
+ G++ P R ++ I I +Q+LL+ + AY+ + V F V+S+ Y KL G++
Sbjct: 101 DALGMVRPDIEPRATQHIEEIIELVQSLLEKEHAYVADNGDVMFIVESYADYGKLSGQDL 160
Query: 370 ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQ 423
E + A KR+P DF LWK +KPGEP +ES WG GRPGWHIECSAM S G
Sbjct: 161 EQLQAGARVDVVDAKRNPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNH 220
Query: 424 VDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
D+H GG DL+FPHHENE AQSC H +VN W+H+G
Sbjct: 221 FDIHGGGSDLQFPHHENEIAQSCCAHG-GDYVNTWMHSG 258
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 14/140 (10%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYL-RYAGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVK 151
+ ++TD+DDKII +A + + L ++++G + A+ V+
Sbjct: 61 LTYVRNITDVDDKIIKRAAETR-------------VTCDELTERLIGDMHADFDALGMVR 107
Query: 152 LDIIRRILEHYFHIHSIVIS 171
DI R +H I +V S
Sbjct: 108 PDIEPRATQHIEEIIELVQS 127
>gi|330998823|ref|ZP_08322550.1| cysteine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
gi|329576037|gb|EGG57556.1| cysteine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
Length = 464
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + + G LPP+ R +++IP + + I+ L + AY + V F V F Y L G
Sbjct: 99 EDLGELGCLPPSVEPRATQYIPKMLALIEKLEEKGYAYQDKNGDVDFSVRKFKPYGALSG 158
Query: 368 R-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+ E + K+ P DFALWK AKPGEP ++S WGKGRPGWHIECSAM+
Sbjct: 159 KKVDELQPGERVRVEEAKQDPLDFALWKRAKPGEPEWDSKWGKGRPGWHIECSAMSCDLL 218
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL FPHHENE AQS A N ++VN W+H+G LR
Sbjct: 219 GETFDIHGGGPDLMFPHHENEIAQSEA-ANGKKFVNTWMHSGPLR 262
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+KIYN ++++ PF + Y CG TVYD HIGH + D+ RR L+ +
Sbjct: 2 ALKIYNTLSRSVEPFKSITPEKVGMYVCGVTVYDDCHIGHGRTFIAFDVARRWLQESGYD 61
Query: 91 HSIVISSVTDIDDKIINKANSLK 113
V +VTD+DDKII +A K
Sbjct: 62 VKFV-RNVTDVDDKIIKRAAERK 83
>gi|59802301|ref|YP_209013.1| hypothetical protein NGO1993 [Neisseria gonorrhoeae FA 1090]
gi|240013127|ref|ZP_04720040.1| CysS [Neisseria gonorrhoeae DGI18]
gi|240015570|ref|ZP_04722110.1| CysS [Neisseria gonorrhoeae FA6140]
gi|240120198|ref|ZP_04733160.1| CysS [Neisseria gonorrhoeae PID24-1]
gi|81311142|sp|Q5F5D6.1|SYC_NEIG1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|59719196|gb|AAW90601.1| putative cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
Length = 473
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 106/196 (54%), Gaps = 23/196 (11%)
Query: 298 FNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVD 357
N R+ E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V
Sbjct: 88 LNARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVR 147
Query: 358 SFPHYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHI 410
F Y +L G++ E + KR P DF LWK+AK GEP +ES WG GRPGWHI
Sbjct: 148 EFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHI 207
Query: 411 ECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCA-------------FHNQS--QWV 455
ECSAM+ + FG D+H GG DL+FPHHENE AQS H QS V
Sbjct: 208 ECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHV 267
Query: 456 NYWLHTGHLRGTDGTR 471
YWLH G +R DG +
Sbjct: 268 KYWLHNGFIR-VDGEK 282
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGELNARFIQAM 96
>gi|260891413|ref|ZP_05902676.1| cysteine--tRNA ligase [Leptotrichia hofstadii F0254]
gi|260858796|gb|EEX73296.1| cysteine--tRNA ligase [Leptotrichia hofstadii F0254]
Length = 355
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 102/170 (60%), Gaps = 15/170 (8%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+FE + K +L + +V+E + I IQ L+D AY D VYF+V + Y KL
Sbjct: 95 FFEDISKLNILESVKRPKVTENMAEIIEIIQKLIDNGFAY-EKDGDVYFEVKKYKDYGKL 153
Query: 366 WGRNENITQ---------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
N+ I + +K++P DFALWK K GEP++ES WG+GRPGWHIECSAMA
Sbjct: 154 --SNQKIEELELGARIDVSEIKKNPVDFALWKKKKDGEPFWESPWGQGRPGWHIECSAMA 211
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQS-CAFHNQSQWVNYWLHTGHLR 465
+ G D+H GG DL FPHHENE AQS CA+H + NYWLH G ++
Sbjct: 212 KKYLGDTFDIHGGGQDLVFPHHENEIAQSKCAYH--GNFANYWLHNGFIQ 259
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T F +N +K Y CGPTVY+ H+G+A V D + R EH +
Sbjct: 1 MKLYNTMTNKIEEFKTIEENKVKMYVCGPTVYNYIHLGNARPIVVFDTLARYFEHK-GMK 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSI--PTRGHAVCN 149
+ + TD+DDKIINK+ V+++Y I ++ S+ P +
Sbjct: 60 VEFVQNFTDVDDKIINKSMEEGTSASEVSEKYIKYFFEDISKLNILESVKRPKVTENMAE 119
Query: 150 VKLDIIRRILEHYF 163
+ ++II++++++ F
Sbjct: 120 I-IEIIQKLIDNGF 132
>gi|322421697|ref|YP_004200920.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
gi|320128084|gb|ADW15644.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
Length = 480
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 102/170 (60%), Gaps = 11/170 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY-IGSDHSVYFDVDSF 359
R+ E+ M + + PT + +E +P I + +Q L+D AY GSD V++ VD F
Sbjct: 92 RFIKEFDSDMARLMLRIPTFQPKATEHVPEIIALVQKLIDKGFAYQSGSD--VFYRVDRF 149
Query: 360 PHYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
Y KL RN Q K P DFALWK AKPGEP++ES WG+GRPGWHIEC
Sbjct: 150 EGYLKLSKRNLEDMQAGARIEVDDKKEHPMDFALWKGAKPGEPYWESPWGQGRPGWHIEC 209
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
SAM++ F G +D+H GG DL FPHHENE AQS A + +V YWLH G
Sbjct: 210 SAMSTKFLGETLDIHGGGKDLIFPHHENEIAQSEAASGKP-FVKYWLHNG 258
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+++YN +T +K F+ N + Y CG TVYD HIGHA NV D+I R L+ +
Sbjct: 3 LRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRYLQAK-GLE 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TDIDDKIIN+AN Y +++R+
Sbjct: 62 VTYVRNYTDIDDKIINRANRDGVPYNEISERF 93
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY----- 198
GHA NV D+I R L+ + + + TDIDDKIIN+AN Y +++R+
Sbjct: 40 GHARANVVFDMIYRYLQAK-GLEVTYVRNYTDIDDKIINRANRDGVPYNEISERFIKEFD 98
Query: 199 --FLRLIFKI 206
RL+ +I
Sbjct: 99 SDMARLMLRI 108
>gi|303256926|ref|ZP_07342940.1| cysteine--tRNA ligase [Burkholderiales bacterium 1_1_47]
gi|302860417|gb|EFL83494.1| cysteine--tRNA ligase [Burkholderiales bacterium 1_1_47]
Length = 464
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + + G LPP+ R +++IP + + I+ L + AY + V F V F Y L G
Sbjct: 99 EDLGELGCLPPSVEPRATQYIPKMLALIEKLEEKGYAYQDKNGDVDFSVRKFKPYGALSG 158
Query: 368 R-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+ E + K+ P DFALWK AKPGEP ++S WGKGRPGWHIECSAM+
Sbjct: 159 KKVDELQPGERVRVEEAKQDPLDFALWKRAKPGEPEWDSKWGKGRPGWHIECSAMSCDLL 218
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL FPHHENE AQS A N ++VN W+H+G LR
Sbjct: 219 GETFDIHGGGPDLMFPHHENEIAQSEA-ANGKKFVNTWMHSGPLR 262
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+KIYN ++++ PF + Y CG TVYD HIGH + D+ RR L+ +
Sbjct: 2 ALKIYNTLSRSVEPFKSITPEKVGMYVCGVTVYDDCHIGHGRTFIAFDVARRWLQESGYD 61
Query: 91 HSIVISSVTDIDDKIINKANSLK 113
V +VTD+DDKII +A K
Sbjct: 62 VKFV-RNVTDVDDKIIKRAAERK 83
>gi|240103606|ref|YP_002959915.1| cysteinyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
gi|259511844|sp|C5A739.1|SYC_THEGJ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|239911160|gb|ACS34051.1| Cysteinyl-tRNA synthetase (cysS) [Thermococcus gammatolerans EJ3]
Length = 476
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 104/166 (62%), Gaps = 9/166 (5%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ E M+ V P RV+E + I SFI+ L + AY GSD VYF+V F Y KL
Sbjct: 97 FLEDMKALKVKPADIYPRVTEHMQDIISFIKKLQEKGYAYEGSD-GVYFEVRKFKDYGKL 155
Query: 366 WG-RNENITQHAV------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
+ E++ + A KR+P DFALWK AKPGEP +ES WG+GRPGWHIECS M+S
Sbjct: 156 SKIKLEDLVKGARVEPGEGKRNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTMSSK 215
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
+ G D+H GG DL FPHHENE AQS A +WV+YW+HTG L
Sbjct: 216 YLGESFDIHGGGNDLIFPHHENEIAQSEACFGH-EWVHYWMHTGFL 260
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
I+IYN +T+ K F ++ ++ Y CGPTVYD PH+GHA + D+IRR LEH +
Sbjct: 2 AIRIYNTLTRQKEEFKPLHEGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGYT 61
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
+++ + TDIDDKII +AN ED K +A+++
Sbjct: 62 -VLMVMNFTDIDDKIIKRANETGEDPKELAEKFL 94
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 20/156 (12%)
Query: 118 TVAKRYFLPLIFKILHQKVVG----SIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSV 173
T K F PL + V G P GHA + D+IRR LEH + +++ +
Sbjct: 10 TRQKEEFKPLHEGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGYT-VLMVMNF 68
Query: 174 TDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKC 233
TDIDDKII +AN ED K +A++ FLR+ + D+K KV + +
Sbjct: 69 TDIDDKIIKRANETGEDPKELAEK-FLRIFLE------------DMKALKVKPADIYPRV 115
Query: 234 DEFRDELLALGVQIKDQKCEATWQFKDGKVFSDRVF 269
E ++++ +++++ ++ DG F R F
Sbjct: 116 TEHMQDIISFIKKLQEKGY--AYEGSDGVYFEVRKF 149
>gi|229515228|ref|ZP_04404688.1| cysteinyl-tRNA synthetase [Vibrio cholerae TMA 21]
gi|229347933|gb|EEO12892.1| cysteinyl-tRNA synthetase [Vibrio cholerae TMA 21]
Length = 459
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R + +I I + ++ L++ AYI + V F+V + Y K
Sbjct: 95 EMYADFDALNIKRPDVEPRATAYIEEIIALVERLIERGFAYIADNGDVMFEVSRYSEYGK 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ + Q A KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSKQDLDQLQAGARVDIEAAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 215 SILGNHFDIHGGGSDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLI--FKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +A E +++ +R + F L+ K P R A
Sbjct: 61 LTFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEP-RATAYIE 119
Query: 150 VKLDIIRRILEHYF 163
+ ++ R++E F
Sbjct: 120 EIIALVERLIERGF 133
>gi|440804138|gb|ELR25016.1| cysteine-tRNA ligase, partial [Acanthamoeba castellanii str. Neff]
Length = 450
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 103/173 (59%), Gaps = 12/173 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
++E E+F + GV PP+ RVSE I + FI+ L AY + VYFD F
Sbjct: 48 KFEREFFRDLTALGVEPPSTVLRVSEHIDEVVQFIRKLESDGVAY-ATPSGVYFDTLRFS 106
Query: 361 --HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIE 411
H FK+ E+ + + KR+ DFALWK+AK GEP + S WG GRPGWHIE
Sbjct: 107 GSHSFKMAPAFEDGLEESGDEVGSRDKRNVRDFALWKAAKEGEPSWASPWGAGRPGWHIE 166
Query: 412 CSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
CSA++ FG +D+H GGIDLKFPHH NE AQ AFH QW NY++H GHL
Sbjct: 167 CSAIS--LFGSHLDVHAGGIDLKFPHHCNEVAQCEAFHGSQQWGNYFIHVGHL 217
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 75 VKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKAN 110
V +DII R L YF +H+ + ++TD+DDKII ++N
Sbjct: 1 VTVDIILRALREYFGVHAWHVLNITDVDDKIIKRSN 36
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 150 VKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKAN 185
V +DII R L YF +H+ + ++TD+DDKII ++N
Sbjct: 1 VTVDIILRALREYFGVHAWHVLNITDVDDKIIKRSN 36
>gi|86157699|ref|YP_464484.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
gi|109894880|sp|Q2IQG7.1|SYC_ANADE RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|85774210|gb|ABC81047.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 481
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 98/179 (54%), Gaps = 11/179 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ + E M+ G L P RVS IP I + I L++ AY + VY+ V FP
Sbjct: 92 RFADAFHEDMDALGNLRPDVEPRVSGHIPEIVALIARLVERGFAYAPGNGDVYYAVRKFP 151
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L RN + KR P DFALWK+AKPGEP ++S WGKGRPGWHIECS
Sbjct: 152 EYGRLSKRNLDDLIAGARVEPGEAKRDPLDFALWKAAKPGEPAWDSPWGKGRPGWHIECS 211
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS----QWVNYWLHTGHLRGTD 468
AM G +DLH GG DL FPHH NE AQS A + + YW+H G ++ D
Sbjct: 212 AMTQKHLGAPIDLHAGGKDLVFPHHTNEIAQSVAATSDGLHAEDFARYWMHNGFVQIDD 270
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I++++ +T K + L+ Y CGPTVYD H+GHA C V D++ R L +
Sbjct: 3 IQVHDTLTAQKRELVPLEPGKLRLYVCGPTVYDYSHLGHARCYVVWDVVVRHLRAR-GLE 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVK 151
+ + TD+DDKII +AN ED +A R+ H+ + A+ N++
Sbjct: 62 VRFVRNFTDVDDKIIQRANERGEDPIALASRF-----ADAFHEDM--------DALGNLR 108
Query: 152 LDIIRRILEHYFHIHSIVISSV 173
D+ R+ H I +++ V
Sbjct: 109 PDVEPRVSGHIPEIVALIARLV 130
>gi|218767348|ref|YP_002341860.1| cysteinyl-tRNA synthetase [Neisseria meningitidis Z2491]
gi|34222758|sp|Q9JWJ3.1|SYC_NEIMA RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|121051356|emb|CAM07647.1| cysteinyl-tRNA synthetase [Neisseria meningitidis Z2491]
Length = 699
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 324 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSG 383
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 384 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 443
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 444 GNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 503
Query: 466 GTDGTR 471
DG +
Sbjct: 504 -VDGEK 508
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 230 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 290 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 322
>gi|167626735|ref|YP_001677235.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189082064|sp|B0U0I3.1|SYC_FRAP2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|167596736|gb|ABZ86734.1| Cysteine--tRNA ligase [Francisella philomiragia subsp. philomiragia
ATCC 25017]
Length = 459
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 104/165 (63%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
++ +K +L PT+ R ++ IP + + I+TL++ AY G++ V++ V F Y KL
Sbjct: 97 DAFDKLNILRPTKEPRATQTIPEMIAMIETLVEKGFAYQGTNGDVFYRVAKFADYGKLSK 156
Query: 368 RN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+N E + Q + K +P DF LWK AK GEP ++S WG GRPGWHIECSAM+
Sbjct: 157 QNLEALEQGSRVDVVEEKENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLL 216
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS A N+ + NYWLH+G ++
Sbjct: 217 GDTFDIHAGGSDLRFPHHENEIAQSEAC-NECTFANYWLHSGMVK 260
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 35 YNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIV 94
YN ++ K F N +K Y CG TVYD HIGHA N+ D+I R + Y
Sbjct: 4 YNSLSGKKEEFKPIEPNKIKMYVCGITVYDDCHIGHARTNIAFDVINRYFK-YRGFDVTF 62
Query: 95 ISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +AN E + +R
Sbjct: 63 VRNITDIDDKIIKRANENGETTDKLVER 90
>gi|56708635|ref|YP_170531.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110671107|ref|YP_667664.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
FSC198]
gi|254371268|ref|ZP_04987270.1| hypothetical protein FTBG_01042 [Francisella tularensis subsp.
tularensis FSC033]
gi|254875501|ref|ZP_05248211.1| cysS, cysteinyl-tRNA synthetase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|385795338|ref|YP_005831744.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
NE061598]
gi|421756284|ref|ZP_16193204.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
80700075]
gi|61216126|sp|Q5NEL1.1|SYC_FRATT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|123063359|sp|Q14G14.1|SYC_FRAT1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|56605127|emb|CAG46249.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110321440|emb|CAL09632.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
FSC198]
gi|151569508|gb|EDN35162.1| hypothetical protein FTBG_01042 [Francisella tularensis subsp.
tularensis FSC033]
gi|254841500|gb|EET19936.1| cysS, cysteinyl-tRNA synthetase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159873|gb|ADA79264.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
NE061598]
gi|409085022|gb|EKM85176.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
80700075]
Length = 464
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 97/161 (60%), Gaps = 8/161 (4%)
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNEN 371
+ +L P++ R +E IP + + I+TL+ AY G++ V++ V F Y KL +N
Sbjct: 106 RLNILKPSKEPRATETIPEMVAMIETLIKKGYAYQGANSDVFYRVTKFADYGKLSKQNLE 165
Query: 372 ITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQV 424
Q K +P DF LWK AK GEP ++S WG GRPGWHIECSAM+ G
Sbjct: 166 ALQQGSRVDVVEEKENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTF 225
Query: 425 DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
D+H GG DL+FPHHENE AQS A N+ + NYWLH+G ++
Sbjct: 226 DIHAGGSDLRFPHHENEIAQSEAC-NECTFANYWLHSGMVK 265
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 35 YNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIV 94
YN ++ K F N +K YACG TVYD HIGHA + D+I R + Y +
Sbjct: 9 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFK-YRGYDVTL 67
Query: 95 ISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +AN E + +R
Sbjct: 68 VRNITDIDDKIIKRANENGESTTELVER 95
>gi|320162457|ref|YP_004175682.1| cysteinyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
gi|319996311|dbj|BAJ65082.1| cysteinyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
Length = 468
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 110/196 (56%), Gaps = 15/196 (7%)
Query: 277 ILIQVSLLGPLTLRTVVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQ 336
I+++ S LG + F Y EY +++E VLP T R ++ I I + IQ
Sbjct: 75 IILRASQLG-------MDPFALAETYIQEYRKNLEDLNVLPATINPRATQEIDQIIAIIQ 127
Query: 337 TLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENITQHAV-------KRSPFDFALWKS 389
L++ AY + VYF V Y +L GR + Q K P DFALWK+
Sbjct: 128 GLIEKGYAYPAPNGDVYFRVTRDEDYGRLSGRKLDEMQAGARIEVGEQKEHPMDFALWKA 187
Query: 390 AKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFH 449
AKPGEP ++S WGKGRPGWHIECSAM H G Q+D+H GG DL FPHHENE AQS ++
Sbjct: 188 AKPGEPAWDSPWGKGRPGWHIECSAMNLHHLGEQIDIHGGGNDLIFPHHENEIAQSESYT 247
Query: 450 NQSQWVNYWLHTGHLR 465
+ + YW+H G L+
Sbjct: 248 GKP-FARYWVHNGMLQ 262
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEH--YF 88
+KIYN +T+ K PF ++ Y CGPTVY+ H+GHA+ + DIIRR LE+ Y
Sbjct: 2 ALKIYNTLTRKKEPFETLEPGKVRMYVCGPTVYNKAHVGHAMSALVFDIIRRYLEYRGYQ 61
Query: 89 HIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
H++ + TD+DDKII +A+ L D +A+ Y
Sbjct: 62 VKHAM---NYTDVDDKIILRASQLGMDPFALAETYI 94
>gi|30316152|sp|Q8DHW6.2|SYC_THEEB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
Length = 486
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 101/179 (56%), Gaps = 21/179 (11%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI-GSDHSVYFDVDSF 359
RY Y + M +LP + R +E IP I + IQ LLD AY+ G D VY+ V F
Sbjct: 92 RYIAAYHQDMAALNILPASAYPRATEVIPEIINLIQGLLDRGYAYVAGGD--VYYAVAQF 149
Query: 360 PHYFKLWGRN-ENITQHAV----------KRSPFDFALWKSAKPGE-----PWYESAWGK 403
P Y KL GR E + A KR P DFALWK+AKP E PW E+ WGK
Sbjct: 150 PSYGKLSGRQLEQLMAGASGRIEEEEEQRKRHPLDFALWKAAKPEEMSVYHPW-EAPWGK 208
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
GRPGWHIECSAM FG VD+H GG+DL FPHHENE AQS A Q +WLH G
Sbjct: 209 GRPGWHIECSAMVRQAFGATVDIHCGGMDLIFPHHENEIAQSEAV-TQQPLARFWLHNG 266
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHY-FHI 90
+ +YN +++ PF + + YACG TVYD H+GHA V D++RR L + +
Sbjct: 3 LHLYNTLSRRLEPFSPLHPERVTIYACGVTVYDYCHLGHARSYVAWDVLRRYLTFLGYTV 62
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
H + + TDIDDKI+ +A E TV+ RY
Sbjct: 63 H--YVQNFTDIDDKILRRAYENGETMATVSDRYI 94
>gi|254875866|ref|ZP_05248576.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254841887|gb|EET20301.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 459
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 104/165 (63%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
++ +K +L PT+ R ++ IP + + I+TL++ AY G++ V++ V F Y KL
Sbjct: 97 DAFDKLNILRPTKEPRATQTIPEMIAMIETLVEKGFAYQGTNGDVFYRVAKFADYGKLSK 156
Query: 368 RN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+N E + Q + K +P DF LWK AK GEP ++S WG GRPGWHIECSAM+
Sbjct: 157 QNLEALEQGSRVDVVEEKENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLL 216
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS A N+ + NYWLH+G ++
Sbjct: 217 GDTFDIHAGGSDLRFPHHENEIAQSEAC-NECTFANYWLHSGMVK 260
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 35 YNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIV 94
YN ++ K F N +K Y CG TVYD HIGHA N+ D+I R + Y
Sbjct: 4 YNSLSGKKEEFKPIEPNKIKMYVCGITVYDDCHIGHARTNIAFDVINRYFK-YRGFDVTF 62
Query: 95 ISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +AN E + +R
Sbjct: 63 VRNITDIDDKIIKRANENGETTDQLVER 90
>gi|428203186|ref|YP_007081775.1| cysteinyl-tRNA synthetase [Pleurocapsa sp. PCC 7327]
gi|427980618|gb|AFY78218.1| cysteinyl-tRNA synthetase [Pleurocapsa sp. PCC 7327]
Length = 480
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 100/175 (57%), Gaps = 15/175 (8%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ YFE + V+ RV++ I IQ IQ LLD AY+ D YF+V +F
Sbjct: 92 RFIKAYFEDIRPLNVMDADEYPRVTDNISGIQQLIQILLDKNYAYV-VDGDAYFNVQAFT 150
Query: 361 HYFKLWGRNENITQ-------------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPG 407
Y KL GR +++ Q ++ K+ P DFALWKSAK GEP ++S WGKGRPG
Sbjct: 151 EYGKLSGRTQSMMQAGASGRVAVSDSANSSKKHPSDFALWKSAKLGEPAWDSPWGKGRPG 210
Query: 408 WHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
WHIECSAM G +D+H GG DL FPHHENE AQS A N YWLH G
Sbjct: 211 WHIECSAMVRALLGETIDIHGGGSDLVFPHHENEIAQSEA-ANGKPLAKYWLHNG 264
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+KIYN T+ PFI + Y CG TVYD H+GHA + D++RR L+ +
Sbjct: 2 ALKIYNTQTRRLEPFIPLEPGKVTMYCCGVTVYDYCHLGHARSYIVWDMVRRYLQ-WRGY 60
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
+ + TDIDDKI+ +A +++R+
Sbjct: 61 EVTYVQNFTDIDDKILKRAQQEGVSMADISERFI 94
>gi|401827270|ref|XP_003887727.1| cysteinyl-tRNA-synthetase [Encephalitozoon hellem ATCC 50504]
gi|392998734|gb|AFM98746.1| cysteinyl-tRNA-synthetase [Encephalitozoon hellem ATCC 50504]
Length = 480
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 109/188 (57%), Gaps = 8/188 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVD--- 357
+Y E+FE M V P+ T V+ ++ I FI+ L AY S SVYFD++
Sbjct: 95 KYTEEFFEDMRALNVKQPSFVTFVTSYVDKIVRFIEKLEANGFAY-ESGGSVYFDLEKYQ 153
Query: 358 ---SFPHYFKLWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
++P + G N ++ KR+P DF LWK +K EP YES WG GRPGWHIECS
Sbjct: 154 EKYNYPLFKSKDGINSEGAENRDKRNPCDFVLWKKSKENEPRYESRWGYGRPGWHIECSV 213
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLR 474
M+S G +D+H GGIDL FPHHENE AQ A+ + WV ++LHTGHL DG + +
Sbjct: 214 MSSDVLGEGLDIHAGGIDLAFPHHENEIAQCQAYFMREPWVRWFLHTGHL-NIDGLKMSK 272
Query: 475 AARFITNL 482
+ + T +
Sbjct: 273 SLKNFTTI 280
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 60/95 (63%)
Query: 29 DTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYF 88
D +K+YN ITKT F N +K Y CGPTVYDSPHIGHA V D+IRR+L Y
Sbjct: 2 DRSLKLYNSITKTSEAFTPSEGNEVKMYICGPTVYDSPHIGHARTYVMFDVIRRVLNDYL 61
Query: 89 HIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + ++TDIDDKIIN+AN + + + ++Y
Sbjct: 62 KYNVKFVMNITDIDDKIINRANEIGVSTEEITRKY 96
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 141 PTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
P GHA V D+IRR+L Y + + ++TDIDDKIIN+AN + + + ++Y
Sbjct: 39 PHIGHARTYVMFDVIRRVLNDYLKYNVKFVMNITDIDDKIINRANEIGVSTEEITRKY 96
>gi|387594974|gb|EIJ92601.1| cysteinyl-tRNA synthetase [Nematocida parisii ERTm1]
Length = 528
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
++E E+FE M GV P TRVS+++ I FI + + AY S+ SVYFDV +
Sbjct: 133 KFEKEFFEDMAALGVDLPNYTTRVSDYVDEIIKFIIGIEERGYAY-ESEGSVYFDVQKYR 191
Query: 361 HYFK---------------LWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGR 405
+K L E K DF LWK++K GEP + S WG GR
Sbjct: 192 EAYKYPLMCSASTQEDQQSLLEEGEGKLTLGQKNRKEDFVLWKASKKGEPAWASKWGAGR 251
Query: 406 PGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
PGWHIECSAMAS+ GG++D+H+GGIDL FPHH+NE AQS + + WV ++LHTGHL
Sbjct: 252 PGWHIECSAMASNIAGGRIDMHSGGIDLMFPHHDNEIAQSEGY-GLNNWVGHFLHTGHL 309
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN ITK K I+ KWY CGPTVYDS HIGHA + LDIIR+ LE YF +
Sbjct: 15 LKIYNTITKHKEELKIEG-FFFKWYTCGPTVYDSAHIGHARSYITLDIIRKTLERYFGYN 73
Query: 92 SIVISSVTDIDDKIINKANSL 112
I ++TDIDDKII KAN
Sbjct: 74 ITYIMNITDIDDKIIVKANEF 94
>gi|376297517|ref|YP_005168747.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
gi|323460079|gb|EGB15944.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
Length = 485
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 100/168 (59%), Gaps = 8/168 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E++ M++ + P+ + +E IP + + Q L+D AY VYF V SF Y K
Sbjct: 94 EFYVDMDRLNIERPSVEPKCTEHIPEMIALTQRLIDKGHAYATPSGDVYFKVRSFEGYGK 153
Query: 365 LWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L GRN I K P DFALWK+AKPGEP++ES WGKGRPGWH+ECSAM+
Sbjct: 154 LSGRNIDELESGARIAPGEEKEDPLDFALWKAAKPGEPFWESPWGKGRPGWHLECSAMSE 213
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
+ +D+H GG DL FPHHENE AQS A + + NYW+H G ++
Sbjct: 214 KYADLPLDIHGGGQDLAFPHHENEVAQSEAATGKP-FANYWVHNGFVQ 260
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+++YN + + K F + N + Y CG T YD HIGHA +V D++ R L+H +
Sbjct: 1 MRLYNTLKRRKEEFTPAHNNDVNMYVCGITAYDLCHIGHARSSVVFDVLYRYLKHEGYDV 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ I + TDIDDKII +AN + ++ +A+++
Sbjct: 61 NF-IRNFTDIDDKIIKRANEVGKEASEIAEKF 91
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA +V D++ R L+H + + I + TDIDDKII +AN + ++ +A
Sbjct: 38 GHARSSVVFDVLYRYLKHEGYDVNF-IRNFTDIDDKIIKRANEVGKEASEIA-------- 88
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQ 250
+K + + +D+ + ++ V KC E E++AL ++ D+
Sbjct: 89 -----EKFIGEFYVDMDRLNIERPSVEPKCTEHIPEMIALTQRLIDK 130
>gi|306836885|ref|ZP_07469840.1| cysteine--tRNA ligase, partial [Corynebacterium accolens ATCC
49726]
gi|304567226|gb|EFM42836.1| cysteine--tRNA ligase [Corynebacterium accolens ATCC 49726]
Length = 374
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 112/175 (64%), Gaps = 17/175 (9%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI-----GSDHSVYFDV 356
YE E+ ++ GVLPP+ R + F+ + ++Q L+D AY G+ SVYFDV
Sbjct: 94 YEREFTKAYNLLGVLPPSVEPRATGFVTQMVEYMQRLIDAGFAYPVPAPDGAAGSVYFDV 153
Query: 357 DSF-----PHYFKLWG-RNENITQ----HAVKRSPFDFALWKSAKPGEPWYESAWGKGRP 406
+++ Y L G R E + Q +A KRSP DFALWK+AKPGEP + + WG+GRP
Sbjct: 154 EAWTKAEGSDYGALSGNRVEEMEQGESDNAGKRSPLDFALWKAAKPGEPSWPTPWGRGRP 213
Query: 407 GWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHT 461
GWH+ECSAM++++ G D+H GG+DL+FPHHENE AQS A + ++ NYW+H
Sbjct: 214 GWHLECSAMSTYYLGSNFDIHCGGLDLQFPHHENEIAQSHAAGD--KFANYWMHN 266
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRR-ILEHYFHI 90
++I++ T+++ F H Y CG T PHIGH V DI+RR +L + +
Sbjct: 4 LRIFDTATRSQRDFEPIRPGHASIYLCGATPQAQPHIGHLRSGVAFDILRRWLLAQGYDV 63
Query: 91 HSIVISSVTDIDDKIINKA 109
++ +VTDIDDKI+ KA
Sbjct: 64 --ALVRNVTDIDDKILTKA 80
>gi|258626834|ref|ZP_05721641.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM603]
gi|258580881|gb|EEW05823.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM603]
Length = 459
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R + +I I + +Q L++ AY+ + V F+V + Y K
Sbjct: 95 EMYADFDALNIKRPDVEPRATAYIEEIIALVQRLIERGFAYVADNGDVMFEVGKYDEYGK 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ Q A KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSKQDLEQLQAGARVDVEAAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 215 SILGNHFDIHGGGSDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLI--FKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +A E +++ +R + F L+ K P R A
Sbjct: 61 LTFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEP-RATAYIE 119
Query: 150 VKLDIIRRILEHYF 163
+ +++R++E F
Sbjct: 120 EIIALVQRLIERGF 133
>gi|206896033|ref|YP_002247201.1| cysteinyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
5265]
gi|206738650|gb|ACI17728.1| cysteinyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
5265]
Length = 460
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 106/173 (61%), Gaps = 10/173 (5%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE Y++ M+ V P RVS+ IP I I+ L+D K AY+ D VYF V SFP+
Sbjct: 91 YERLYYKLMDFLNVEPLYAYIRVSQVIPDIIEAIKQLIDKKHAYVTPD-GVYFSVPSFPN 149
Query: 362 YFKLWGRN-ENIT--QHAVKRSPF-----DFALWKSAKPGEP-WYESAWGKGRPGWHIEC 412
Y +L GR E+I+ + V+ SPF DFALWKS KP E W+ S WG GRPGWHIEC
Sbjct: 150 YGELSGRKVEDISLLESRVEPSPFKKDPRDFALWKSRKPNETVWWHSPWGDGRPGWHIEC 209
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
+ ++ F G +D H GG DL FPHHENE+AQS A Q + W+HTG LR
Sbjct: 210 TVISVKFAGFPLDFHGGGSDLIFPHHENEKAQSEALMGQEPFARAWMHTGMLR 262
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+Y+ +++ V + + Y CG T YD PH+GH + D+ R ++ +
Sbjct: 1 MKLYDTLSRKFVDLEKKPGEKIAGYVCGITPYDEPHLGHVRTALVFDLFHRYVKAQGY-K 59
Query: 92 SIVISSVTDIDDKIINKANSL 112
+ +S+ TD+DDKII ++ L
Sbjct: 60 PVFVSNFTDVDDKIIERSVQL 80
>gi|147676630|ref|YP_001210845.1| cysteinyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
gi|187629838|sp|A5D5M0.1|SYC_PELTS RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|146272727|dbj|BAF58476.1| cysteinyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
Length = 484
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/171 (47%), Positives = 98/171 (57%), Gaps = 9/171 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY EYF+ + V R VSE IP I + L+ AY+ D +VYF+V F
Sbjct: 90 RYIGEYFKDADALNVRRADRHPLVSEHIPDIIKMVDELVKKGAAYV-VDGNVYFEVRKFA 148
Query: 361 HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR Q KR P DFALWK+AKPGEP ++S WG GRPGWHIECS
Sbjct: 149 GYGKLSGRTLEDMQAGARVEVDPRKRDPLDFALWKAAKPGEPCWDSPWGPGRPGWHIECS 208
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM+ + G D+H GG DL FPHHENE AQS A Q +V YW+H G +
Sbjct: 209 AMSLKYLGTNFDIHGGGYDLIFPHHENEIAQSEAATGQP-FVRYWMHNGFI 258
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++IYN +T+ K F + + Y CGPT Y+ H+G+A V D +RR L H +
Sbjct: 1 MEIYNTLTRRKENFQPREPGRVCMYVCGPTTYNYIHLGNARPLVFFDTVRRYLIHKGY-E 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + + TD+DDKIIN+A +D +A+RY
Sbjct: 60 VLFVQNFTDVDDKIINRAQEEGDDPLALARRY 91
>gi|22299370|ref|NP_682617.1| cysteinyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
gi|22295553|dbj|BAC09379.1| cysteinyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
Length = 463
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 101/179 (56%), Gaps = 21/179 (11%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI-GSDHSVYFDVDSF 359
RY Y + M +LP + R +E IP I + IQ LLD AY+ G D VY+ V F
Sbjct: 69 RYIAAYHQDMAALNILPASAYPRATEVIPEIINLIQGLLDRGYAYVAGGD--VYYAVAQF 126
Query: 360 PHYFKLWGRN-ENITQHAV----------KRSPFDFALWKSAKPGE-----PWYESAWGK 403
P Y KL GR E + A KR P DFALWK+AKP E PW E+ WGK
Sbjct: 127 PSYGKLSGRQLEQLMAGASGRIEEEEEQRKRHPLDFALWKAAKPEEMSVYHPW-EAPWGK 185
Query: 404 GRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
GRPGWHIECSAM FG VD+H GG+DL FPHHENE AQS A Q +WLH G
Sbjct: 186 GRPGWHIECSAMVRQAFGATVDIHCGGMDLIFPHHENEIAQSEAV-TQQPLARFWLHNG 243
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHY-FHIHSIVISSVTDIDDKIINKANSLKE 114
YACG TVYD H+GHA V D++RR L + +H + + TDIDDKI+ +A E
Sbjct: 4 YACGVTVYDYCHLGHARSYVAWDVLRRYLTFLGYTVH--YVQNFTDIDDKILRRAYENGE 61
Query: 115 DYKTVAKRYF 124
TV+ RY
Sbjct: 62 TMATVSDRYI 71
>gi|258621406|ref|ZP_05716440.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM573]
gi|262171188|ref|ZP_06038866.1| cysteinyl-tRNA synthetase [Vibrio mimicus MB-451]
gi|258586794|gb|EEW11509.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM573]
gi|261892264|gb|EEY38250.1| cysteinyl-tRNA synthetase [Vibrio mimicus MB-451]
Length = 459
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R + +I I + +Q L++ AY+ + V F+V + Y K
Sbjct: 95 EMYADFDALNIKRPDVEPRATAYIEEIIALVQRLIERGFAYVADNGDVMFEVGKYDEYGK 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ Q A KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSKQDLEQLQAGARVDVEAAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 215 SILGNHFDIHGGGSDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLI--FKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +A E +++ +R + F L+ K P R A
Sbjct: 61 LTFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEP-RATAYIE 119
Query: 150 VKLDIIRRILEHYF 163
+ +++R++E F
Sbjct: 120 EIIALVQRLIERGF 133
>gi|330445515|ref|ZP_08309167.1| cysteinyl-tRNA synthetase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489706|dbj|GAA03664.1| cysteinyl-tRNA synthetase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 460
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + G+ P R ++FI I + + L++ AY+ S+ V F+V F Y +
Sbjct: 95 EMHADFDALGMKRPDVEPRATQFIAEIIALCERLIERGFAYVASNGDVMFEVSKFEDYGR 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ + Q KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSKQDLDQLQAGARVDIETAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 215 AILGDHFDIHGGGSDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNSLTRQKEAFTPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYL-RYSGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +A E +++ +R
Sbjct: 61 LTFVRNITDIDDKIIKRAAENGESCESLTER 91
>gi|268600169|ref|ZP_06134336.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
gi|268685235|ref|ZP_06152097.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
gi|268584300|gb|EEZ48976.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
gi|268625519|gb|EEZ57919.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
Length = 476
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 107/196 (54%), Gaps = 23/196 (11%)
Query: 298 FNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVD 357
N R+ E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V
Sbjct: 91 LNARFIQAMHEDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVR 150
Query: 358 SFPHYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHI 410
F Y +L G++ E + KR P DF LWK+AK GEP +ES WG GRPGWHI
Sbjct: 151 EFAAYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHI 210
Query: 411 ECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAF------HNQSQW---------V 455
ECSAM+ + FG D+H GG DL+FPHHENE AQS H+ +Q V
Sbjct: 211 ECSAMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGRSIASHV 270
Query: 456 NYWLHTGHLRGTDGTR 471
YWLH G +R DG +
Sbjct: 271 KYWLHNGFIR-VDGEK 285
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 7 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 66
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 67 V-RNITDIDDKIIARAAENGETIGELNARFIQAM 99
>gi|407071860|ref|ZP_11102698.1| cysteinyl-tRNA ligase [Vibrio cyclitrophicus ZF14]
Length = 461
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 93/152 (61%), Gaps = 8/152 (5%)
Query: 318 PTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENITQ--- 374
P R +EFI I ++ L+ AY+ S+ V F+V F Y KL ++ + Q
Sbjct: 108 PDVEPRATEFITEIIELVEKLIQRGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGA 167
Query: 375 ----HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGG 430
+ KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S G D+H GG
Sbjct: 168 RVDVDSAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGG 227
Query: 431 IDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
DL+FPHHENE AQSC H +Q+VN W+H+G
Sbjct: 228 SDLQFPHHENEIAQSCCAHG-TQYVNTWMHSG 258
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +AN E ++ +R
Sbjct: 61 LNFVRNITDIDDKIIKRANENGESCDSLTER 91
>gi|449144349|ref|ZP_21775164.1| cysteinyl-tRNA synthetase [Vibrio mimicus CAIM 602]
gi|449079850|gb|EMB50769.1| cysteinyl-tRNA synthetase [Vibrio mimicus CAIM 602]
Length = 459
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R + +I I + +Q L++ AY+ + V F+V + Y K
Sbjct: 95 EMYADFDALNIKRPDVEPRATAYIEEIIALVQRLIERGFAYVADNGDVMFEVGKYDEYGK 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ Q A KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSKQDLEQLQAGARVDVEAAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 215 SILGNHFDIHGGGSDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLI--FKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +A E +++ +R + F L+ K P R A
Sbjct: 61 LTFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEP-RATAYIE 119
Query: 150 VKLDIIRRILEHYF 163
+ +++R++E F
Sbjct: 120 EIIALVQRLIERGF 133
>gi|45358623|ref|NP_988180.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis S2]
gi|61216204|sp|Q6LYD1.1|SYC_METMP RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|45047489|emb|CAF30616.1| Cysteinyl-tRNA synthetase [Methanococcus maripaludis S2]
Length = 476
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ + M V P +V+E I I +FI+ L++ AY D VYF+V F +Y KL
Sbjct: 96 FLDDMATLKVKPADIYPKVTEHISEIIAFIEKLIEKGFAYKTED-GVYFEVKKFKNYGKL 154
Query: 366 WGRN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
N E++ A K++ DFALWK+AKPGEP +ES +G GRPGWHIECSAM+S
Sbjct: 155 SNINLEDLVSGARIETSEKKKNQKDFALWKTAKPGEPKWESPFGSGRPGWHIECSAMSSK 214
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAARF 478
+ G Q D+H GG DL FPHHENE AQS A+ + WVNYWLHTG + F
Sbjct: 215 YLGEQFDIHGGGRDLSFPHHENEIAQSSAYSGK-DWVNYWLHTGFVMVNGEKMSKSLGNF 273
Query: 479 IT 480
+T
Sbjct: 274 VT 275
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T+ + F N+ +K Y CGPTVYD+ H+GH V DIIRR LEH +
Sbjct: 2 LKVYNTLTRCEEEFKTLNEKEVKMYVCGPTVYDNTHLGHGRTYVSFDIIRRYLEHMGYTV 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
++VI + TDIDDKII +A ++D K +++++
Sbjct: 62 NLVI-NFTDIDDKIIKRAYEKEKDPKEISEQF 92
>gi|117927293|ref|YP_871844.1| cysteinyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
gi|166200127|sp|A0LQZ8.1|SYC_ACIC1 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|117647756|gb|ABK51858.1| cysteinyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
Length = 469
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 106/185 (57%), Gaps = 20/185 (10%)
Query: 297 LFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY-IGSDHSVYFD 355
LF+ Y L G +PPT + IP I + I+ L+D AY G D VYF
Sbjct: 96 LFDSAYRL--------LGCVPPTVEPWATGHIPQIIALIRRLIDAGHAYPAGGD--VYFA 145
Query: 356 VDSFPHYFKLWGRNENITQHAV-----KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHI 410
V SFP Y L GR+ + Q KR P DFALWK AKPGEP +ES WG GRPGWHI
Sbjct: 146 VRSFPAYGGLSGRDPDALQAGESDGVHKRDPLDFALWKGAKPGEPSWESPWGPGRPGWHI 205
Query: 411 ECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG--HLRGTD 468
ECSAM++ + G D+H GG+DL FPHHENE AQS A + + YWLH G LRG
Sbjct: 206 ECSAMSTTYLGSTFDIHGGGLDLLFPHHENECAQSQAAGD--GFARYWLHNGLVTLRGEK 263
Query: 469 GTRRL 473
++ L
Sbjct: 264 MSKSL 268
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+++++ ++ F + + Y CG TV PHIGH + D++ R L H +
Sbjct: 3 LRLHDTRSRGLREFQPADPPRVTMYVCGATVQAPPHIGHLRSGLVFDVLVRWLA--VHGY 60
Query: 92 SIVI-SSVTDIDDKIINKANSLKEDYKTVAKRYF 124
+V +VTDIDDKI+ A + + VA R +
Sbjct: 61 DVVFCRNVTDIDDKILRVAAAEGIPWWQVAYRNY 94
>gi|159484322|ref|XP_001700207.1| cysteinyl-tRNA synthetase [Chlamydomonas reinhardtii]
gi|158272523|gb|EDO98322.1| cysteinyl-tRNA synthetase [Chlamydomonas reinhardtii]
Length = 637
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 100/202 (49%), Gaps = 40/202 (19%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E+ + M VLPP R + F+P + S I ++ AY V+FDV S P
Sbjct: 129 RFIDEFNKDMAALNVLPPALEPRATAFVPQMISTITDIIANGHAYAVDGGDVFFDVASLP 188
Query: 361 HYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L GR E + + KRSP DFALWK+AKPGEP + S WG GRPGWHIECS
Sbjct: 189 GYGRLSGRQQEDNRAGERVAVDSRKRSPADFALWKAAKPGEPAWPSPWGPGRPGWHIECS 248
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCA-------------------------- 447
+M G +D+H GG DL FPHHENE AQS A
Sbjct: 249 SMIRELMGPVIDIHGGGRDLVFPHHENELAQSQAACGCGQHGHEHGHEHGGQQGGASTSG 308
Query: 448 -------FHNQSQWVNYWLHTG 462
HN + +V YWLH G
Sbjct: 309 GDGSQSQLHNGTDFVRYWLHNG 330
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 32 IKIYNPITKTKVPFIIQ-NKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+ +N ++K+K F + + + Y CG TVYD HIGHA V D++ R L
Sbjct: 36 VTFFNTMSKSKELFRPRLSDGSVSMYVCGVTVYDYSHIGHARVYVAFDVLYRFLSAACGY 95
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKT 118
+ + TDIDDKII +A + +T
Sbjct: 96 KVTYVRNFTDIDDKIIARAQQARSGVET 123
>gi|15641850|ref|NP_231482.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121591342|ref|ZP_01678630.1| cysteinyl-tRNA synthetase [Vibrio cholerae 2740-80]
gi|121730275|ref|ZP_01682651.1| cysteinyl-tRNA synthetase [Vibrio cholerae V52]
gi|147673703|ref|YP_001217382.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|227081977|ref|YP_002810528.1| cysteinyl-tRNA synthetase [Vibrio cholerae M66-2]
gi|227118296|ref|YP_002820192.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|229508055|ref|ZP_04397560.1| cysteinyl-tRNA synthetase [Vibrio cholerae BX 330286]
gi|229511706|ref|ZP_04401185.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
gi|229518845|ref|ZP_04408288.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC9]
gi|229607616|ref|YP_002878264.1| cysteinyl-tRNA synthetase [Vibrio cholerae MJ-1236]
gi|254848934|ref|ZP_05238284.1| cysteinyl-tRNA synthetase [Vibrio cholerae MO10]
gi|255745392|ref|ZP_05419341.1| cysteinyl-tRNA synthetase [Vibrio cholera CIRS 101]
gi|298498113|ref|ZP_07007920.1| cysteinyl-tRNA synthetase [Vibrio cholerae MAK 757]
gi|360035732|ref|YP_004937495.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 str. 2010EL-1786]
gi|379741684|ref|YP_005333653.1| cysteinyl-tRNA synthetase [Vibrio cholerae IEC224]
gi|417813891|ref|ZP_12460544.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-49A2]
gi|417817628|ref|ZP_12464257.1| cysteinyl-tRNA synthetase [Vibrio cholerae HCUF01]
gi|418334866|ref|ZP_12943780.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-06A1]
gi|418338484|ref|ZP_12947378.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-23A1]
gi|418346401|ref|ZP_12951163.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-28A1]
gi|418350163|ref|ZP_12954894.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-43A1]
gi|418355542|ref|ZP_12958261.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-61A1]
gi|419826827|ref|ZP_14350326.1| cysteine--tRNA ligase [Vibrio cholerae CP1033(6)]
gi|421318339|ref|ZP_15768907.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1032(5)]
gi|421321620|ref|ZP_15772173.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1038(11)]
gi|421325417|ref|ZP_15775941.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1041(14)]
gi|421329079|ref|ZP_15779589.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1042(15)]
gi|421332987|ref|ZP_15783464.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1046(19)]
gi|421336576|ref|ZP_15787037.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1048(21)]
gi|421340007|ref|ZP_15790439.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-20A2]
gi|421348335|ref|ZP_15798712.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-46A1]
gi|422896952|ref|ZP_16934405.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-40A1]
gi|422903151|ref|ZP_16938131.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-48A1]
gi|422907036|ref|ZP_16941843.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-70A1]
gi|422913886|ref|ZP_16948392.1| cysteinyl-tRNA synthetase [Vibrio cholerae HFU-02]
gi|422926092|ref|ZP_16959106.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-38A1]
gi|423145411|ref|ZP_17133005.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-19A1]
gi|423150087|ref|ZP_17137401.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-21A1]
gi|423153907|ref|ZP_17141088.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-22A1]
gi|423156990|ref|ZP_17144083.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-32A1]
gi|423160561|ref|ZP_17147501.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-33A2]
gi|423165379|ref|ZP_17152110.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-48B2]
gi|423731398|ref|ZP_17704701.1| cysteine--tRNA ligase [Vibrio cholerae HC-17A1]
gi|423767016|ref|ZP_17712820.1| cysteine--tRNA ligase [Vibrio cholerae HC-50A2]
gi|423895289|ref|ZP_17727036.1| cysteine--tRNA ligase [Vibrio cholerae HC-62A1]
gi|423930727|ref|ZP_17731430.1| cysteine--tRNA ligase [Vibrio cholerae HC-77A1]
gi|424002842|ref|ZP_17745917.1| cysteine--tRNA ligase [Vibrio cholerae HC-17A2]
gi|424006631|ref|ZP_17749601.1| cysteine--tRNA ligase [Vibrio cholerae HC-37A1]
gi|424024612|ref|ZP_17764263.1| cysteine--tRNA ligase [Vibrio cholerae HC-62B1]
gi|424027497|ref|ZP_17767100.1| cysteine--tRNA ligase [Vibrio cholerae HC-69A1]
gi|424586768|ref|ZP_18026347.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1030(3)]
gi|424591511|ref|ZP_18030938.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1037(10)]
gi|424595416|ref|ZP_18034737.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1040(13)]
gi|424599332|ref|ZP_18038513.1| cysteinyl-tRNA synthetase [Vibrio Cholerae CP1044(17)]
gi|424602052|ref|ZP_18041194.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1047(20)]
gi|424607022|ref|ZP_18045966.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1050(23)]
gi|424610847|ref|ZP_18049686.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-39A1]
gi|424613658|ref|ZP_18052446.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-41A1]
gi|424617639|ref|ZP_18056311.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-42A1]
gi|424622418|ref|ZP_18060926.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-47A1]
gi|424645383|ref|ZP_18083119.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-56A2]
gi|424653150|ref|ZP_18090530.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-57A2]
gi|424656971|ref|ZP_18094256.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-81A2]
gi|440710051|ref|ZP_20890702.1| cysteinyl-tRNA synthetase [Vibrio cholerae 4260B]
gi|443504209|ref|ZP_21071167.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-64A1]
gi|443508106|ref|ZP_21074870.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-65A1]
gi|443511949|ref|ZP_21078587.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-67A1]
gi|443515507|ref|ZP_21082018.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-68A1]
gi|443519298|ref|ZP_21085695.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-71A1]
gi|443524191|ref|ZP_21090404.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-72A2]
gi|443531789|ref|ZP_21097803.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-7A1]
gi|443535585|ref|ZP_21101463.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-80A1]
gi|443539133|ref|ZP_21104987.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-81A1]
gi|449055723|ref|ZP_21734391.1| Cysteinyl-tRNA synthetase [Vibrio cholerae O1 str. Inaba G4222]
gi|11387140|sp|Q9KQZ9.1|SYC_VIBCH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187631647|sp|A5F763.1|SYC_VIBC3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|254781697|sp|C3LNF1.1|SYC_VIBCM RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|9656376|gb|AAF94996.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121546806|gb|EAX56972.1| cysteinyl-tRNA synthetase [Vibrio cholerae 2740-80]
gi|121627977|gb|EAX60538.1| cysteinyl-tRNA synthetase [Vibrio cholerae V52]
gi|146315586|gb|ABQ20125.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|227009865|gb|ACP06077.1| cysteinyl-tRNA synthetase [Vibrio cholerae M66-2]
gi|227013746|gb|ACP09956.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|229343534|gb|EEO08509.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC9]
gi|229351671|gb|EEO16612.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
gi|229355560|gb|EEO20481.1| cysteinyl-tRNA synthetase [Vibrio cholerae BX 330286]
gi|229370271|gb|ACQ60694.1| cysteinyl-tRNA synthetase [Vibrio cholerae MJ-1236]
gi|254844639|gb|EET23053.1| cysteinyl-tRNA synthetase [Vibrio cholerae MO10]
gi|255737222|gb|EET92618.1| cysteinyl-tRNA synthetase [Vibrio cholera CIRS 101]
gi|297542446|gb|EFH78496.1| cysteinyl-tRNA synthetase [Vibrio cholerae MAK 757]
gi|340036377|gb|EGQ97353.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-49A2]
gi|340037351|gb|EGQ98326.1| cysteinyl-tRNA synthetase [Vibrio cholerae HCUF01]
gi|341621711|gb|EGS47448.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-70A1]
gi|341621796|gb|EGS47529.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-48A1]
gi|341622546|gb|EGS48200.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-40A1]
gi|341637547|gb|EGS62225.1| cysteinyl-tRNA synthetase [Vibrio cholerae HFU-02]
gi|341646298|gb|EGS70412.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-38A1]
gi|356417575|gb|EHH71190.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-06A1]
gi|356418447|gb|EHH72044.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-21A1]
gi|356423021|gb|EHH76482.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-19A1]
gi|356428467|gb|EHH81693.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-22A1]
gi|356430126|gb|EHH83335.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-23A1]
gi|356433480|gb|EHH86669.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-28A1]
gi|356440077|gb|EHH93038.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-32A1]
gi|356444659|gb|EHH97468.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-43A1]
gi|356445658|gb|EHH98460.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-33A2]
gi|356451191|gb|EHI03892.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-48B2]
gi|356452040|gb|EHI04719.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-61A1]
gi|356646886|gb|AET26941.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 str. 2010EL-1786]
gi|378795194|gb|AFC58665.1| cysteinyl-tRNA synthetase [Vibrio cholerae IEC224]
gi|395916597|gb|EJH27427.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1032(5)]
gi|395917255|gb|EJH28083.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1041(14)]
gi|395918614|gb|EJH29438.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1038(11)]
gi|395927613|gb|EJH38376.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1042(15)]
gi|395928389|gb|EJH39142.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1046(19)]
gi|395931675|gb|EJH42419.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1048(21)]
gi|395939290|gb|EJH49972.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-20A2]
gi|395942914|gb|EJH53590.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-46A1]
gi|395958976|gb|EJH69427.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-56A2]
gi|395959689|gb|EJH70106.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-57A2]
gi|395962555|gb|EJH72851.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-42A1]
gi|395970947|gb|EJH80652.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-47A1]
gi|395973689|gb|EJH83243.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1030(3)]
gi|395976039|gb|EJH85503.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1047(20)]
gi|408007296|gb|EKG45379.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-39A1]
gi|408013276|gb|EKG51005.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-41A1]
gi|408031528|gb|EKG68144.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1037(10)]
gi|408032309|gb|EKG68895.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1040(13)]
gi|408041832|gb|EKG77920.1| cysteinyl-tRNA synthetase [Vibrio Cholerae CP1044(17)]
gi|408043299|gb|EKG79300.1| cysteinyl-tRNA synthetase [Vibrio cholerae CP1050(23)]
gi|408053849|gb|EKG88848.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-81A2]
gi|408607617|gb|EKK81020.1| cysteine--tRNA ligase [Vibrio cholerae CP1033(6)]
gi|408624020|gb|EKK96972.1| cysteine--tRNA ligase [Vibrio cholerae HC-17A1]
gi|408633949|gb|EKL06229.1| cysteine--tRNA ligase [Vibrio cholerae HC-50A2]
gi|408654159|gb|EKL25301.1| cysteine--tRNA ligase [Vibrio cholerae HC-77A1]
gi|408655089|gb|EKL26214.1| cysteine--tRNA ligase [Vibrio cholerae HC-62A1]
gi|408845239|gb|EKL85355.1| cysteine--tRNA ligase [Vibrio cholerae HC-37A1]
gi|408846012|gb|EKL86124.1| cysteine--tRNA ligase [Vibrio cholerae HC-17A2]
gi|408870174|gb|EKM09454.1| cysteine--tRNA ligase [Vibrio cholerae HC-62B1]
gi|408878800|gb|EKM17793.1| cysteine--tRNA ligase [Vibrio cholerae HC-69A1]
gi|439974274|gb|ELP50451.1| cysteinyl-tRNA synthetase [Vibrio cholerae 4260B]
gi|443431154|gb|ELS73706.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-64A1]
gi|443435312|gb|ELS81455.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-65A1]
gi|443438932|gb|ELS88647.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-67A1]
gi|443442917|gb|ELS96219.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-68A1]
gi|443447094|gb|ELT03749.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-71A1]
gi|443449525|gb|ELT09816.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-72A2]
gi|443457179|gb|ELT24576.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-7A1]
gi|443461125|gb|ELT32198.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-80A1]
gi|443465233|gb|ELT39893.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-81A1]
gi|448264762|gb|EMB01999.1| Cysteinyl-tRNA synthetase [Vibrio cholerae O1 str. Inaba G4222]
Length = 459
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R + +I I + ++ L++ AY+ + V F+V + Y K
Sbjct: 95 EMYADFDALNIKRPDVEPRATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGK 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ + Q A KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSKQDLDQLQAGARVDIEAAKRSPLDFVLWKMSKPGEPTWESPWGSGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 215 SILGTHFDIHGGGSDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLI--FKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +A E +++ +R + F L+ K P R A
Sbjct: 61 LTFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEP-RATAYIE 119
Query: 150 VKLDIIRRILEHYF 163
+ ++ R++E F
Sbjct: 120 EIIALVERLIERGF 133
>gi|24373357|ref|NP_717400.1| cysteinyl-tRNA synthetase CysS [Shewanella oneidensis MR-1]
gi|30316159|sp|Q8EG22.1|SYC_SHEON RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|24347617|gb|AAN54844.1| cysteinyl-tRNA synthetase CysS [Shewanella oneidensis MR-1]
Length = 459
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 96/165 (58%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R + I I ++ LL AY+ +D V F V SFP Y +
Sbjct: 95 EMHKDFDALNMKRPDFEPRATLHIAEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGR 154
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L G+N Q K++P DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSGQNLEQLQAGARVEVDDNKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ + +VNYW+HTG
Sbjct: 215 KHLGLHFDIHGGGSDLQFPHHENEIAQSCCAHD-TPYVNYWMHTG 258
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN IT+ K F N + Y CG TVYD HIGH V D+I R L Y
Sbjct: 2 LKIYNSITRQKQEFKPINPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYL-RYAGYE 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL--IFKILHQKVVGSIPTRGHAVCN 149
++TDIDDKII +AN +ED T+ R + F L+ K P +
Sbjct: 61 VNFQRNITDIDDKIIKRANENQEDCNTLTDRLIGEMHKDFDALNMKRPDFEPRATLHIAE 120
Query: 150 VKLDIIRRIL 159
+ +D++ R+L
Sbjct: 121 I-IDMVERLL 129
>gi|261378624|ref|ZP_05983197.1| cysteine--tRNA ligase [Neisseria cinerea ATCC 14685]
gi|269144957|gb|EEZ71375.1| cysteine--tRNA ligase [Neisseria cinerea ATCC 14685]
Length = 473
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAF------HNQSQW---------VNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS HN +Q V YWLH G +R
Sbjct: 218 GDTFDIHGGGADLQFPHHENEIAQSVGASGHSCGHNHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L +
Sbjct: 2 LNIYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPL 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ V ++TDIDDKII +A E + R+ +
Sbjct: 62 TYV-RNITDIDDKIIARAAENGETIGELTARFIQAM 96
>gi|218709995|ref|YP_002417616.1| cysteinyl-tRNA synthetase [Vibrio splendidus LGP32]
gi|254781698|sp|B7VGZ1.1|SYC_VIBSL RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|218323014|emb|CAV19191.1| Cysteinyl-tRNA synthetase [Vibrio splendidus LGP32]
Length = 461
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 93/152 (61%), Gaps = 8/152 (5%)
Query: 318 PTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENITQ--- 374
P R +EFI I ++ L+ AY+ S+ V F+V F Y KL ++ + Q
Sbjct: 108 PDVEPRATEFITEIIELVEKLIQRGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGA 167
Query: 375 ----HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGG 430
+ KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S G D+H GG
Sbjct: 168 RVDIDSAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGG 227
Query: 431 IDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
DL+FPHHENE AQSC H +Q+VN W+H+G
Sbjct: 228 SDLQFPHHENEIAQSCCAHG-TQYVNTWMHSG 258
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +AN E ++ +R
Sbjct: 61 LNFVRNITDIDDKIIKRANENGESCDSLTER 91
>gi|153830573|ref|ZP_01983240.1| cysteinyl-tRNA synthetase [Vibrio cholerae 623-39]
gi|229520308|ref|ZP_04409734.1| cysteinyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
gi|229529129|ref|ZP_04418519.1| cysteinyl-tRNA synthetase [Vibrio cholerae 12129(1)]
gi|254292163|ref|ZP_04962934.1| cysteinyl-tRNA synthetase [Vibrio cholerae AM-19226]
gi|417821192|ref|ZP_12467806.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE39]
gi|419830317|ref|ZP_14353802.1| cysteine--tRNA ligase [Vibrio cholerae HC-1A2]
gi|419837569|ref|ZP_14361007.1| cysteine--tRNA ligase [Vibrio cholerae HC-46B1]
gi|421343906|ref|ZP_15794309.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-43B1]
gi|421354512|ref|ZP_15804844.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-45]
gi|422307789|ref|ZP_16394944.1| cysteine--tRNA ligase [Vibrio cholerae CP1035(8)]
gi|422917697|ref|ZP_16952015.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-02A1]
gi|423735520|ref|ZP_17708717.1| cysteine--tRNA ligase [Vibrio cholerae HC-41B1]
gi|423822603|ref|ZP_17716613.1| cysteine--tRNA ligase [Vibrio cholerae HC-55C2]
gi|423855994|ref|ZP_17720418.1| cysteine--tRNA ligase [Vibrio cholerae HC-59A1]
gi|423882868|ref|ZP_17724005.1| cysteine--tRNA ligase [Vibrio cholerae HC-60A1]
gi|423956069|ref|ZP_17734908.1| cysteine--tRNA ligase [Vibrio cholerae HE-40]
gi|423985139|ref|ZP_17738457.1| cysteine--tRNA ligase [Vibrio cholerae HE-46]
gi|423998127|ref|ZP_17741379.1| cysteine--tRNA ligase [Vibrio cholerae HC-02C1]
gi|424009862|ref|ZP_17752799.1| cysteine--tRNA ligase [Vibrio cholerae HC-44C1]
gi|424017020|ref|ZP_17756850.1| cysteine--tRNA ligase [Vibrio cholerae HC-55B2]
gi|424019945|ref|ZP_17759731.1| cysteine--tRNA ligase [Vibrio cholerae HC-59B1]
gi|424625311|ref|ZP_18063772.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-50A1]
gi|424629797|ref|ZP_18068084.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-51A1]
gi|424633841|ref|ZP_18071941.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-52A1]
gi|424636921|ref|ZP_18074929.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-55A1]
gi|424640833|ref|ZP_18078716.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-56A1]
gi|424648900|ref|ZP_18086563.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-57A1]
gi|443527820|ref|ZP_21093869.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-78A1]
gi|148873935|gb|EDL72070.1| cysteinyl-tRNA synthetase [Vibrio cholerae 623-39]
gi|150421926|gb|EDN13902.1| cysteinyl-tRNA synthetase [Vibrio cholerae AM-19226]
gi|229332903|gb|EEN98389.1| cysteinyl-tRNA synthetase [Vibrio cholerae 12129(1)]
gi|229342674|gb|EEO07666.1| cysteinyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
gi|340038823|gb|EGQ99797.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE39]
gi|341636579|gb|EGS61273.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-02A1]
gi|395939986|gb|EJH50667.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-43B1]
gi|395953637|gb|EJH64250.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-45]
gi|408012740|gb|EKG50509.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-50A1]
gi|408018373|gb|EKG55826.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-52A1]
gi|408023551|gb|EKG60712.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-56A1]
gi|408024210|gb|EKG61335.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-55A1]
gi|408033180|gb|EKG69738.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-57A1]
gi|408055353|gb|EKG90286.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-51A1]
gi|408618993|gb|EKK92040.1| cysteine--tRNA ligase [Vibrio cholerae CP1035(8)]
gi|408620090|gb|EKK93102.1| cysteine--tRNA ligase [Vibrio cholerae HC-1A2]
gi|408629831|gb|EKL02495.1| cysteine--tRNA ligase [Vibrio cholerae HC-41B1]
gi|408634579|gb|EKL06814.1| cysteine--tRNA ligase [Vibrio cholerae HC-55C2]
gi|408640897|gb|EKL12679.1| cysteine--tRNA ligase [Vibrio cholerae HC-59A1]
gi|408640992|gb|EKL12773.1| cysteine--tRNA ligase [Vibrio cholerae HC-60A1]
gi|408657928|gb|EKL29003.1| cysteine--tRNA ligase [Vibrio cholerae HE-40]
gi|408664537|gb|EKL35371.1| cysteine--tRNA ligase [Vibrio cholerae HE-46]
gi|408852482|gb|EKL92304.1| cysteine--tRNA ligase [Vibrio cholerae HC-02C1]
gi|408856117|gb|EKL95812.1| cysteine--tRNA ligase [Vibrio cholerae HC-46B1]
gi|408860082|gb|EKL99733.1| cysteine--tRNA ligase [Vibrio cholerae HC-55B2]
gi|408863657|gb|EKM03131.1| cysteine--tRNA ligase [Vibrio cholerae HC-44C1]
gi|408867039|gb|EKM06401.1| cysteine--tRNA ligase [Vibrio cholerae HC-59B1]
gi|443453692|gb|ELT17510.1| cysteinyl-tRNA synthetase [Vibrio cholerae HC-78A1]
Length = 459
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R + +I I + ++ L++ AY+ + V F+V + Y K
Sbjct: 95 EMYADFDALNIKRPDVEPRATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGK 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ + Q A KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSKQDLDQLQAGARVDIEAAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 215 SILGNHFDIHGGGSDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLI--FKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +A E +++ +R + F L+ K P R A
Sbjct: 61 LTFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEP-RATAYIE 119
Query: 150 VKLDIIRRILEHYF 163
+ ++ R++E F
Sbjct: 120 EIIALVERLIERGF 133
>gi|424659553|ref|ZP_18096802.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-16]
gi|408052108|gb|EKG87167.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-16]
Length = 459
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R + +I I + ++ L++ AY+ + V F+V + Y K
Sbjct: 95 EMYADFDALNIKRPDVEPRATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGK 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ + Q A KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSKQDLDQLQAGARVDIEAAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 215 SILGNHFDIHGGGSDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLI--FKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +A +E +++ +R + F L+ K P R A
Sbjct: 61 LTFVRNITDIDDKIIKRAAENEETCESLTERLIQEMYADFDALNIKRPDVEP-RATAYIE 119
Query: 150 VKLDIIRRILEHYF 163
+ ++ R++E F
Sbjct: 120 EIIALVERLIERGF 133
>gi|118496920|ref|YP_897970.1| cysteinyl-tRNA synthetase [Francisella novicida U112]
gi|187629823|sp|A0Q4Q1.1|SYC_FRATN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|118422826|gb|ABK89216.1| cysteinyl-tRNA synthetase [Francisella novicida U112]
Length = 459
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 97/161 (60%), Gaps = 8/161 (4%)
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNEN 371
+ +L P++ R +E IP + + I+TL+ AY G++ V++ V F Y KL +N
Sbjct: 101 RLNILKPSKEPRATETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLE 160
Query: 372 ITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQV 424
Q K +P DF LWK AK GEP ++S WG GRPGWHIECSAM+ G
Sbjct: 161 ALQQGSRVDVVEEKENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTF 220
Query: 425 DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
D+H GG DL+FPHHENE AQS A N+ + NYWLH+G ++
Sbjct: 221 DIHAGGSDLRFPHHENEIAQSEAC-NECTFANYWLHSGMVK 260
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 35 YNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIV 94
YN ++ K F N +K YACG TVYD HIGHA + D+I R + Y +
Sbjct: 4 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFK-YRGYDVTL 62
Query: 95 ISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +AN E + +R
Sbjct: 63 VRNITDIDDKIIKRANENGESTTELVER 90
>gi|294101993|ref|YP_003553851.1| cysteinyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
gi|293616973|gb|ADE57127.1| cysteinyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
Length = 472
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 101/167 (60%), Gaps = 9/167 (5%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
EYFE + GV R ++ + I +QTL+D AY+ D V+F V+SFP Y K
Sbjct: 96 EYFEDADALGVRRADIYPRATDHMKEIVEVVQTLIDKGHAYV-VDGDVFFSVESFPGYGK 154
Query: 365 LWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ I + KR P DFALWK+ KPGEP +ES WG GRPGWHIECS M++
Sbjct: 155 LSKQSIEDLQSGSRIDVNEQKRHPLDFALWKAQKPGEPAWESPWGLGRPGWHIECSVMST 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
+ G D+H+GG DL FPHHENE AQ+ A Q+V +WLH G+L
Sbjct: 215 KYLGNTFDIHSGGSDLIFPHHENEVAQAEAATGM-QFVRFWLHNGYL 260
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ +YN +T+ K PFI + + +Y+CGPTVYD HIG+A + D+ RR LE +
Sbjct: 3 LMLYNDLTRKKEPFIPLKEGEVGFYSCGPTVYDFFHIGNARPFIVFDVFRRYLEDIGY-K 61
Query: 92 SIVISSVTDIDDKIINKAN----SLKEDYKTVAKRYF 124
+ + + TDIDDK+IN+AN ++KE K YF
Sbjct: 62 VVFVQNFTDIDDKMINRANEEGITVKELADAFIKEYF 98
>gi|421351582|ref|ZP_15801947.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-25]
gi|395952027|gb|EJH62641.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-25]
Length = 459
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R + +I I + ++ L++ AY+ + V F+V + Y K
Sbjct: 95 EMYADFDALNIKRPDVEPRATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGK 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ + Q A KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSKQDLDQLQAGARVDIEAAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 215 SILGNHFDIHGGGSDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLI--FKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +A E +++ +R + F L+ K P R A
Sbjct: 61 LTFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEP-RATAYIE 119
Query: 150 VKLDIIRRILEHYF 163
+ ++ R++E F
Sbjct: 120 EIIALVERLIERGF 133
>gi|406912438|gb|EKD52050.1| hypothetical protein ACD_62C00126G0006 [uncultured bacterium]
Length = 530
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 105/172 (61%), Gaps = 11/172 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAY-IGSDHSVYFDVDSF 359
+Y ++E G++ PT R ++ IP I + I L+D AY IG D V++ V SF
Sbjct: 138 KYIAAFYEDTNALGLVNPTIEPRATDHIPDIIAIINKLVDKGLAYQIGGD--VFYAVRSF 195
Query: 360 PHYFKLWGRN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
P Y KL G+N E++ A VK+ P DFALWKSAKP EP + S WG+GRPGWHIEC
Sbjct: 196 PQYGKLSGKNIEDLESGARVDVSDVKKDPLDFALWKSAKPNEPKWPSPWGEGRPGWHIEC 255
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
SAM++ + G D+H GG DL FPHHENE AQS + + +W+H G L
Sbjct: 256 SAMSTKYLGDTFDIHCGGCDLIFPHHENEIAQSEGATGKP-FARFWVHNGFL 306
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ +YN +T+ K F + YACG TVYD H+G+A V D++ R L+ Y
Sbjct: 49 LTLYNTLTRKKEEFKPLTDGKVGMYACGVTVYDYCHLGNARAMVNFDVLHRYLK-YVGYD 107
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TD+DDKII KAN+ V +Y
Sbjct: 108 VTFVRNFTDVDDKIIRKANAENISCSEVTSKY 139
>gi|428222839|ref|YP_007107009.1| cysteinyl-tRNA synthetase [Synechococcus sp. PCC 7502]
gi|427996179|gb|AFY74874.1| cysteinyl-tRNA synthetase [Synechococcus sp. PCC 7502]
Length = 508
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 107/185 (57%), Gaps = 17/185 (9%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ Y E M + +LP + R + IP I + IQ L+D AY + VY+ V FP
Sbjct: 91 RFIKAYQEDMARLNILPADKYPRATTSIPVIINLIQALIDQGYAY-AAGGDVYYAVQKFP 149
Query: 361 HYFKLWGRN-ENITQHA-------------VKRSPFDFALWKSAKPGEPWYESAWGKGRP 406
Y KL GR E++ A +K PFDFALWKSAKP E ++ES WG GRP
Sbjct: 150 SYGKLSGRKFEDMQAGASGRVDPKIDQTEPLKHYPFDFALWKSAKPNETFWESPWGHGRP 209
Query: 407 GWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRG 466
GWHIECSAM FG ++D+H GG DL+FPHHENE AQS A ++ NYW+H G +
Sbjct: 210 GWHIECSAMVKSEFGDRLDIHAGGADLQFPHHENEIAQSEAV-TKTPLANYWMHNGFV-N 267
Query: 467 TDGTR 471
DG +
Sbjct: 268 IDGEK 272
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++IYN +T++K F + +K Y CG TVYD H+GHA V D++RR L+ Y +
Sbjct: 2 LRIYNSLTRSKQEFTPLEPDAVKMYVCGVTVYDYCHLGHARAYVVWDMVRRYLQ-YAGYN 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ ++TDIDDKI+N+A + ++ R+
Sbjct: 61 VRYVQNITDIDDKILNRAKTEGVTMAEISDRF 92
>gi|418291506|ref|ZP_12903501.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM220]
gi|372199758|gb|EHP13951.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM220]
Length = 473
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 105/186 (56%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG+GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 218 GNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 96
>gi|421562116|ref|ZP_16007952.1| cysteine--tRNA ligase [Neisseria meningitidis NM2657]
gi|254671629|emb|CBA09335.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha153]
gi|402335505|gb|EJU70770.1| cysteine--tRNA ligase [Neisseria meningitidis NM2657]
Length = 473
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 105/186 (56%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG+GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 218 GNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFTPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 96
>gi|254373761|ref|ZP_04989244.1| cysteinyl-tRNA synthetase [Francisella novicida GA99-3548]
gi|290954116|ref|ZP_06558737.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
URFT1]
gi|422939228|ref|YP_007012375.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FSC200]
gi|151571482|gb|EDN37136.1| cysteinyl-tRNA synthetase [Francisella novicida GA99-3548]
gi|407294379|gb|AFT93285.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FSC200]
Length = 459
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 97/161 (60%), Gaps = 8/161 (4%)
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNEN 371
+ +L P++ R +E IP + + I+TL+ AY G++ V++ V F Y KL +N
Sbjct: 101 RLNILKPSKEPRATETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLE 160
Query: 372 ITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQV 424
Q K +P DF LWK AK GEP ++S WG GRPGWHIECSAM+ G
Sbjct: 161 ALQQGSRVDVVEEKENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTF 220
Query: 425 DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
D+H GG DL+FPHHENE AQS A N+ + NYWLH+G ++
Sbjct: 221 DIHAGGSDLRFPHHENEIAQSEAC-NECTFANYWLHSGMVK 260
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 35 YNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIV 94
YN ++ K F N +K YACG TVYD HIGHA + D+I R + Y +
Sbjct: 4 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFK-YRGYDVTL 62
Query: 95 ISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +AN E + +R
Sbjct: 63 VRNITDIDDKIIKRANENGESTTELVER 90
>gi|387594227|gb|EIJ89251.1| cysteinyl-tRNA synthetase [Nematocida parisii ERTm3]
Length = 535
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 104/179 (58%), Gaps = 17/179 (9%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
++E E+FE M GV P TRVS+++ I FI + + AY S+ SVYFDV +
Sbjct: 133 KFEKEFFEDMAALGVDLPNYTTRVSDYVDEIIKFIIGIEERGYAY-ESEGSVYFDVQKYR 191
Query: 361 HYFK---------------LWGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGR 405
+K L E K DF LWK++K GEP + S WG GR
Sbjct: 192 EAYKYPLMCSASTQEDQQSLLEEGEGKLTLGQKNRKEDFVLWKASKKGEPAWASKWGAGR 251
Query: 406 PGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
PGWHIECSAMAS+ GG++D+H+GGIDL FPHH+NE AQS + + WV ++LHTGHL
Sbjct: 252 PGWHIECSAMASNIAGGRIDMHSGGIDLMFPHHDNEIAQSEGY-GLNNWVGHFLHTGHL 309
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN ITK K I+ KWY CGPTVYDS HIGHA + LDIIR+ LE YF +
Sbjct: 15 LKIYNTITKHKEELKIEG-FFFKWYTCGPTVYDSAHIGHARSYITLDIIRKTLERYFGYN 73
Query: 92 SIVISSVTDIDDKIINKANSL 112
I ++TDIDDKII KAN
Sbjct: 74 ITYIMNITDIDDKIIVKANEF 94
>gi|385325019|ref|YP_005879458.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase; CysRS) [Neisseria
meningitidis 8013]
gi|261393406|emb|CAX51042.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase; CysRS) [Neisseria
meningitidis 8013]
Length = 473
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 105/186 (56%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG+GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 218 GNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 96
>gi|443476781|ref|ZP_21066669.1| cysteinyl-tRNA synthetase [Pseudanabaena biceps PCC 7429]
gi|443018198|gb|ELS32490.1| cysteinyl-tRNA synthetase [Pseudanabaena biceps PCC 7429]
Length = 478
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 100/181 (55%), Gaps = 13/181 (7%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y Y E M + + R + IP I IQ L+D AY+ S+ VY+ V FP
Sbjct: 91 QYIAAYDEDMARLNIAKANSYPRATATIPEIIELIQQLIDRNYAYV-SNGDVYYAVQKFP 149
Query: 361 HYFKLWGRNENITQHAV----------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHI 410
Y KL GR Q KR PFDFALWKSAKP EP++ S WG GRPGWHI
Sbjct: 150 TYGKLSGRKLEDMQAGASGRVDDREEQKRYPFDFALWKSAKPNEPFWVSPWGDGRPGWHI 209
Query: 411 ECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGT 470
ECSAM G +D+H GG DL+FPHHENE AQS A + + NYW+H G + DG
Sbjct: 210 ECSAMVRSHLGETIDIHAGGTDLQFPHHENEIAQSEAAYKKP-LANYWMHNGFV-NIDGE 267
Query: 471 R 471
+
Sbjct: 268 K 268
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++IYN IT+ K FI ++ Y CG TVYD H+GHA V D++RR LE + +
Sbjct: 3 LRIYNTITRRKEDFIPLTSGIVRMYVCGVTVYDYCHLGHARAYVVWDMVRRYLETKYQVQ 62
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ ++TDIDDKI+ +A + +A++Y
Sbjct: 63 --FVQNITDIDDKILKRAQEQNTTMQAIAEQY 92
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 116 YKTVAKRY--FLPLIFKILHQKVVGSIPTR----GHAVCNVKLDIIRRILEHYFHIHSIV 169
Y T+ +R F+PL I+ V G GHA V D++RR LE + +
Sbjct: 6 YNTITRRKEDFIPLTSGIVRMYVCGVTVYDYCHLGHARAYVVWDMVRRYLETKYQVQ--F 63
Query: 170 ISSVTDIDDKIINKANSLKEDYKTVAKRY 198
+ ++TDIDDKI+ +A + +A++Y
Sbjct: 64 VQNITDIDDKILKRAQEQNTTMQAIAEQY 92
>gi|289523037|ref|ZP_06439891.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503580|gb|EFD24744.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 475
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 101/166 (60%), Gaps = 9/166 (5%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
YFE + GV T + +E I I I +++ AYI D +VYFDV S+P+Y KL
Sbjct: 97 YFEDIIPLGVRQATVHPKATEHIDDIIRLISRIIENGHAYI-IDGNVYFDVKSYPNYGKL 155
Query: 366 WGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
G++ Q KR P DF LWK+ K GEPW++S WG GRPGWHIECSAMA
Sbjct: 156 SGQSLEELQAGARIEVDERKRHPLDFVLWKAKKEGEPWWDSPWGHGRPGWHIECSAMAMK 215
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
+ G +D+H GG DL FPHHENE AQ+ A + Q+V +W+H G+L
Sbjct: 216 YLGDTIDIHGGGSDLIFPHHENEIAQAEAATGK-QFVRFWIHNGYL 260
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
G+ +YN +T+ K F + + +Y CGPTVYD HIG+A V D +RR +E Y
Sbjct: 2 GLVLYNDLTRRKEEFAPVSPGRIGFYVCGPTVYDYIHIGNARPFVVFDALRRYME-YKGF 60
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I + + TDIDDK+INKAN L K +A+++
Sbjct: 61 EVIYVQNFTDIDDKMINKANQLGITVKELAEQF 93
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
G+A V D +RR +E Y I + + TDIDDK+INKAN L K +A+++
Sbjct: 40 GNARPFVVFDALRRYME-YKGFEVIYVQNFTDIDDKMINKANQLGITVKELAEQF 93
>gi|194324147|ref|ZP_03057921.1| cysteinyl-tRNA synthetase [Francisella novicida FTE]
gi|194321594|gb|EDX19078.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. novicida
FTE]
Length = 464
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 97/161 (60%), Gaps = 8/161 (4%)
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNEN 371
+ +L P++ R +E IP + + I+TL+ AY G++ V++ V F Y KL +N
Sbjct: 106 RLNILKPSKEPRATETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLE 165
Query: 372 ITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQV 424
Q K +P DF LWK AK GEP ++S WG GRPGWHIECSAM+ G
Sbjct: 166 ALQQGSRVDVVEEKENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTF 225
Query: 425 DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
D+H GG DL+FPHHENE AQS A N+ + NYWLH+G ++
Sbjct: 226 DIHAGGSDLRFPHHENEIAQSEAC-NECTFANYWLHSGMVK 265
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 35 YNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIV 94
YN ++ K F N +K YACG TVYD HIGHA + D+I R + Y +
Sbjct: 9 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFK-YRGYDVTL 67
Query: 95 ISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +AN E + +R
Sbjct: 68 VRNITDIDDKIIKRANENGESTTELVER 95
>gi|433497645|ref|ZP_20454670.1| cysteine--tRNA ligase [Neisseria meningitidis M7089]
gi|433499690|ref|ZP_20456691.1| cysteine--tRNA ligase [Neisseria meningitidis M7124]
gi|433501759|ref|ZP_20458738.1| cysteine--tRNA ligase [Neisseria meningitidis NM174]
gi|432231584|gb|ELK87243.1| cysteine--tRNA ligase [Neisseria meningitidis M7089]
gi|432232373|gb|ELK88018.1| cysteine--tRNA ligase [Neisseria meningitidis M7124]
gi|432232760|gb|ELK88396.1| cysteine--tRNA ligase [Neisseria meningitidis NM174]
Length = 473
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 105/186 (56%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG+GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 218 GNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 96
>gi|350564143|ref|ZP_08932962.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium aerophilum AL3]
gi|349778143|gb|EGZ32502.1| cysteinyl-tRNA synthetase [Thioalkalimicrobium aerophilum AL3]
Length = 456
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 99/165 (60%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E +L P + ++FIP IQ + TL++ AY + VYF V SF Y +L G
Sbjct: 99 EDETALNILRPDIEPKATDFIPEIQQLVNTLIEKGHAYAAPNGDVYFKVKSFESYGRLSG 158
Query: 368 RNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+ + + K+ P DF LWK++K EP ++SAWG+GRPGWHIECSAM+
Sbjct: 159 KKQEDLEAGARVEINPNKQDPMDFVLWKASKENEPAWDSAWGQGRPGWHIECSAMSGSCI 218
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G ++D+H GG+DL+FPHHENE AQS H + +VN W+H G +R
Sbjct: 219 GERLDIHGGGMDLQFPHHENEIAQSECAHGE-HYVNTWMHVGFVR 262
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 29/156 (18%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHI 90
++IYN T+ K F + Y CG TVYD HIGHA V D ++R + +
Sbjct: 3 LQIYNTETRQKETFKPIVPGKVGIYVCGVTVYDYCHIGHARVMVVFDTVVRHMRARGLEV 62
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL-----IFKILH------------ 133
+ ++TDIDDKIIN+A +E +++ +R+ + IL
Sbjct: 63 K--YVRNITDIDDKIINRAFENQESVQSLTERFIKAMHEDETALNILRPDIEPKATDFIP 120
Query: 134 --QKVVGSIPTRGHAVCNVKLDIIRRILEHYFHIHS 167
Q++V ++ +GHA D+ YF + S
Sbjct: 121 EIQQLVNTLIEKGHAYAAPNGDV-------YFKVKS 149
>gi|261400776|ref|ZP_05986901.1| cysteine--tRNA ligase [Neisseria lactamica ATCC 23970]
gi|269209376|gb|EEZ75831.1| cysteine--tRNA ligase [Neisseria lactamica ATCC 23970]
Length = 473
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 105/186 (56%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG+GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 218 GNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 35 YNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIV 94
YN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + + V
Sbjct: 5 YNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTYV 64
Query: 95 ISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
++TDIDDKII +A E + R+ +
Sbjct: 65 -RNITDIDDKIIARAAENGETIGELTARFIQAM 96
>gi|89256953|ref|YP_514315.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
LVS]
gi|115315315|ref|YP_764038.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
OSU18]
gi|134301406|ref|YP_001121374.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|156503147|ref|YP_001429212.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|254368215|ref|ZP_04984235.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
257]
gi|254372282|ref|ZP_04987773.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. novicida
GA99-3549]
gi|421751146|ref|ZP_16188203.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
AS_713]
gi|421753001|ref|ZP_16190009.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
831]
gi|421756735|ref|ZP_16193634.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
80700103]
gi|421758602|ref|ZP_16195446.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
70102010]
gi|423051325|ref|YP_007009759.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. holarctica
F92]
gi|424673870|ref|ZP_18110799.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
70001275]
gi|109894902|sp|Q2A1T7.1|SYC_FRATH RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|122324692|sp|Q0BKI3.1|SYC_FRATO RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187629822|sp|A7NE53.1|SYC_FRATF RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|187629824|sp|A4IWF2.1|SYC_FRATW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|89144784|emb|CAJ80122.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
LVS]
gi|115130214|gb|ABI83401.1| cysteine--tRNA ligase [Francisella tularensis subsp. holarctica
OSU18]
gi|134049183|gb|ABO46254.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|134254025|gb|EBA53119.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
257]
gi|151570011|gb|EDN35665.1| cysteinyl-tRNA synthetase [Francisella novicida GA99-3549]
gi|156253750|gb|ABU62256.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|409088688|gb|EKM88750.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
831]
gi|409088845|gb|EKM88903.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
AS_713]
gi|409092065|gb|EKM92047.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
70102010]
gi|409093282|gb|EKM93232.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
80700103]
gi|417435524|gb|EKT90418.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. tularensis
70001275]
gi|421952047|gb|AFX71296.1| cysteinyl-tRNA ligase [Francisella tularensis subsp. holarctica
F92]
Length = 464
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 97/161 (60%), Gaps = 8/161 (4%)
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNEN 371
+ +L P++ R +E IP + + I+TL+ AY G++ V++ V F Y KL +N
Sbjct: 106 RLNILKPSKEPRATETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLE 165
Query: 372 ITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQV 424
Q K +P DF LWK AK GEP ++S WG GRPGWHIECSAM+ G
Sbjct: 166 ALQQGSRVDVVEEKENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTF 225
Query: 425 DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
D+H GG DL+FPHHENE AQS A N+ + NYWLH+G ++
Sbjct: 226 DIHAGGSDLRFPHHENEIAQSEAC-NECTFANYWLHSGMVK 265
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 35 YNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIV 94
YN ++ K F N +K YACG TVYD HIGHA + D+I R + Y +
Sbjct: 9 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFK-YRGYDVTL 67
Query: 95 ISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +AN E + +R
Sbjct: 68 VRNITDIDDKIIKRANENGESTTELVER 95
>gi|421560018|ref|ZP_16005883.1| cysteine--tRNA ligase [Neisseria meningitidis 92045]
gi|402334103|gb|EJU69397.1| cysteine--tRNA ligase [Neisseria meningitidis 92045]
Length = 473
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 105/186 (56%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG+GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 218 GDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFTPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 96
>gi|406980236|gb|EKE01868.1| hypothetical protein ACD_21C00032G0011 [uncultured bacterium]
Length = 459
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 98/158 (62%), Gaps = 8/158 (5%)
Query: 315 VLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENITQ 374
V+PP RV+E IP I IQTL++ AY+ VY++V F Y KL ++ N +
Sbjct: 105 VIPPDFEPRVTEHIPQIVDLIQTLINKDFAYVTKTGDVYYEVAKFKAYGKLAHQDLNSLR 164
Query: 375 HAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLH 427
+ KR P DF LWK+AKP EP++ S WG GRPGWHIECSAMA + G D+H
Sbjct: 165 TGIRVETSEDKRDPLDFVLWKAAKPNEPFWPSPWGNGRPGWHIECSAMAKKYLGENFDIH 224
Query: 428 TGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
GG DL+FPHH+NE AQS A N +VNYW+H G ++
Sbjct: 225 GGGNDLQFPHHQNELAQSEA-ANGCCFVNYWMHMGFVQ 261
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ IYN ++ K F + + Y CG TVYD+ HIGH + D++ R L +
Sbjct: 2 LHIYNTFSRQKELFKPISTPKVGLYVCGLTVYDNCHIGHGRLFIWFDVVVRYLRSVGY-Q 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVK 151
+ ++TDIDDKII +A L DY+T L Q+++ S+ T ++ +
Sbjct: 61 VTYVRNITDIDDKIIKRAQELNIDYQT-------------LTQRMIDSMHTDEKSLDVIP 107
Query: 152 LDIIRRILEHYFHIHSIVISSVTDIDDKIINK 183
D R+ EH I + D+ +INK
Sbjct: 108 PDFEPRVTEH--------IPQIVDLIQTLINK 131
>gi|336319525|ref|YP_004599493.1| cysteinyl-tRNA synthetase [[Cellvibrio] gilvus ATCC 13127]
gi|336103106|gb|AEI10925.1| cysteinyl-tRNA synthetase [[Cellvibrio] gilvus ATCC 13127]
Length = 477
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 104/172 (60%), Gaps = 15/172 (8%)
Query: 303 ELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHY 362
E + + + GVLPPT R + +P + + TL++ AY+ D VYFDV SFP Y
Sbjct: 94 ERAFTRAYDALGVLPPTYEPRATGHVPAMVELMSTLVERGHAYVAGDGDVYFDVRSFPEY 153
Query: 363 FKLWGRN--------ENITQHAVKRSPFDFALWKSAKPGEP---WYESAWGKGRPGWHIE 411
L + ++ + KR P DFALWK+AKPGEP +++ +G+GRPGWH+E
Sbjct: 154 GALTNQRLEDMAPAPDDAPEAGDKRDPHDFALWKAAKPGEPETAAWDTPFGRGRPGWHLE 213
Query: 412 CSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQ-WVNYWLHTG 462
CSAMA+ + G + D+H GG+DL+FPHHENE AQS H Q + +WLH G
Sbjct: 214 CSAMAARYLGPEFDIHGGGLDLRFPHHENELAQS---HAAGQPFARFWLHNG 262
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 27/155 (17%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+++++ T+T F+ + + Y CG TV PH+GH V D++ R L
Sbjct: 3 LRLFDSATRTVRDFVPRVAGEVGIYLCGATVQAPPHVGHVRSGVAFDVLVRWLRRQ-GTR 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVA---KRYF------LPLIFKILHQKVVGSIPT 142
++ +VTD+DDKI+ K+ + E + A +R F L ++ + G +P
Sbjct: 62 VTLVRNVTDVDDKILAKSAAAGEPWWAWAMDNERAFTRAYDALGVLPPTYEPRATGHVPA 121
Query: 143 ----------RGHAVCNVKLDIIRRILEHYFHIHS 167
RGHA D+ YF + S
Sbjct: 122 MVELMSTLVERGHAYVAGDGDV-------YFDVRS 149
>gi|419833996|ref|ZP_14357451.1| cysteine--tRNA ligase [Vibrio cholerae HC-61A2]
gi|408648818|gb|EKL20135.1| cysteine--tRNA ligase [Vibrio cholerae HC-61A2]
Length = 411
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R + +I I + ++ L++ AY+ + V F+V + Y K
Sbjct: 47 EMYADFDALNIKRPDVEPRATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGK 106
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ + Q A KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 107 LSKQDLDQLQAGARVDIEAAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 166
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 167 SILGNHFDIHGGGSDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 210
>gi|161869111|ref|YP_001598277.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 053442]
gi|161594664|gb|ABX72324.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 053442]
Length = 699
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 324 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 383
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 384 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 443
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 444 GDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 503
Query: 466 GTDGTR 471
DG +
Sbjct: 504 -VDGEK 508
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 290 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 322
>gi|254369813|ref|ZP_04985823.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FSC022]
gi|157122772|gb|EDO66901.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FSC022]
Length = 464
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 97/161 (60%), Gaps = 8/161 (4%)
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNEN 371
+ +L P++ R +E IP + + I+TL+ AY G++ V++ V F Y KL +N
Sbjct: 106 RLNILKPSKEPRATETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLE 165
Query: 372 ITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQV 424
Q K +P DF LWK AK GEP ++S WG GRPGWHIECSAM+ G
Sbjct: 166 ALQQGSRVDVVEEKENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTF 225
Query: 425 DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
D+H GG DL+FPHHENE AQS A N+ + NYWLH+G ++
Sbjct: 226 DIHAGGSDLRFPHHENEIAQSEAC-NECTFANYWLHSGMVK 265
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 35 YNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIV 94
YN ++ K F N +K YACG TVYD HIGHA + D+I R + Y +
Sbjct: 9 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFK-YRGYDVTL 67
Query: 95 ISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +AN E + +R
Sbjct: 68 VRNITDIDDKIIKRANENGESTTELVER 95
>gi|421863184|ref|ZP_16294884.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379306|emb|CBX22079.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 483
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 105/186 (56%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 108 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 167
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG+GRPGWHIECSAM+ + F
Sbjct: 168 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLF 227
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 228 GNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 287
Query: 466 GTDGTR 471
DG +
Sbjct: 288 -VDGEK 292
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 35 YNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIV 94
YN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + + V
Sbjct: 15 YNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTYV 74
Query: 95 ISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
++TDIDDKII +A E + R+ +
Sbjct: 75 -RNITDIDDKIIARAAENGETIGELTARFIQAM 106
>gi|297579367|ref|ZP_06941295.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC385]
gi|417825068|ref|ZP_12471656.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE48]
gi|422909615|ref|ZP_16944258.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-09]
gi|422923151|ref|ZP_16956313.1| cysteinyl-tRNA synthetase [Vibrio cholerae BJG-01]
gi|429886116|ref|ZP_19367682.1| Cysteinyl-tRNA synthetase [Vibrio cholerae PS15]
gi|297536961|gb|EFH75794.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC385]
gi|340046553|gb|EGR07483.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE48]
gi|341634699|gb|EGS59448.1| cysteinyl-tRNA synthetase [Vibrio cholerae HE-09]
gi|341644386|gb|EGS68602.1| cysteinyl-tRNA synthetase [Vibrio cholerae BJG-01]
gi|429227010|gb|EKY33067.1| Cysteinyl-tRNA synthetase [Vibrio cholerae PS15]
Length = 459
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R + +I I + ++ L++ AY+ + V F+V + Y K
Sbjct: 95 EMYADFDALNIKRPDVEPRATAYIEEIIALVERLIERGFAYVADNGDVMFEVSRYSEYGK 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ + Q A KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSKQDLDQLQAGARVDIEAAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 215 SILGNHFDIHGGGSDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLI--FKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +A E +++ +R + F L+ K P R A
Sbjct: 61 LTFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEP-RATAYIE 119
Query: 150 VKLDIIRRILEHYF 163
+ ++ R++E F
Sbjct: 120 EIIALVERLIERGF 133
>gi|421555761|ref|ZP_16001686.1| cysteine--tRNA ligase [Neisseria meningitidis 98008]
gi|402328737|gb|EJU64103.1| cysteine--tRNA ligase [Neisseria meningitidis 98008]
Length = 473
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 105/186 (56%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG+GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 218 GDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 96
>gi|14521604|ref|NP_127080.1| cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|13878786|sp|Q9UYV2.1|SYC_PYRAB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|5458823|emb|CAB50310.1| cysS cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|380742214|tpe|CCE70848.1| TPA: cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
Length = 477
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 97/164 (59%), Gaps = 9/164 (5%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ E M V P RV+E I I FI+ L + AY GSD VYF+V F Y KL
Sbjct: 97 FLEDMNALKVKPADIYPRVTEHIDDIIEFIKKLKEKGYAYEGSD-GVYFEVQKFKDYGKL 155
Query: 366 WG-------RNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
G + + K++P DFALWK AKPGEP ++S WG+GRPGWHIECS M+S
Sbjct: 156 SGVKIEELRKGARVEPGEGKKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSK 215
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
+ G D+H GG DL FPHHENE AQS A +WV YWLHTG
Sbjct: 216 YLGESFDIHGGGNDLIFPHHENEIAQSEACFGH-EWVRYWLHTG 258
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
GIK+YN +T+ K ++ Y CGPTVYD PH+GHA + D+IRR LEH
Sbjct: 2 GIKVYNTLTRKKEELKPLRDGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHR-GF 60
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+++ + TDIDDKII +A ED +A+R+
Sbjct: 61 TVLMVMNFTDIDDKIIKRAQETGEDPGKLAERF 93
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 141 PTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 198
P GHA + D+IRR LEH +++ + TDIDDKII +A ED +A+R+
Sbjct: 37 PHLGHARTYIAFDVIRRYLEHR-GFTVLMVMNFTDIDDKIIKRAQETGEDPGKLAERF 93
>gi|421907821|ref|ZP_16337690.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha704]
gi|393291136|emb|CCI73697.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha704]
Length = 699
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 324 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSG 383
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 384 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 443
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 444 GDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 503
Query: 466 GTDGTR 471
DG +
Sbjct: 504 -VDGEK 508
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 230 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 290 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 322
>gi|308450233|ref|XP_003088225.1| hypothetical protein CRE_17704 [Caenorhabditis remanei]
gi|308248740|gb|EFO92692.1| hypothetical protein CRE_17704 [Caenorhabditis remanei]
Length = 364
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 102/173 (58%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
+ E G L P A R + +I +Q+ I L++ AY ++ VYF+V+ F +Y +L G
Sbjct: 3 DDAENLGCLAPDEAPRATNYIDQMQNMIGNLVNKGTAYPSANGDVYFEVEKFENYGRLSG 62
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R +E + K+ PFDF LWK AK EP + S WG GRPGWHIECSAM++
Sbjct: 63 RKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTC 122
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A ++ Q+VNYW+H G + DG +
Sbjct: 123 CLGNHFDIHGGGSDLLFPHHENEIAQSEAATDE-QYVNYWMHVGFI-NVDGEK 173
>gi|229523866|ref|ZP_04413271.1| cysteinyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
gi|229337447|gb|EEO02464.1| cysteinyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
Length = 459
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R + +I I + ++ L++ AY+ + V F+V + Y K
Sbjct: 95 EMYADFDALNIKRPDVEPRATAYIEEIIALVERLIERGFAYVADNGDVMFEVSRYSEYGK 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ + Q A KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSKQDLDQLQAGARVDIEAAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 215 SILGNHFDIHGGGSDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLI--FKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +A E +++ +R + F L+ K P R A
Sbjct: 61 LTFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEP-RATAYIE 119
Query: 150 VKLDIIRRILEHYF 163
+ ++ R++E F
Sbjct: 120 EIIALVERLIERGF 133
>gi|182420105|ref|ZP_02951339.1| cysteinyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237666779|ref|ZP_04526764.1| cysteine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182376142|gb|EDT73729.1| cysteinyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237657978|gb|EEP55533.1| cysteine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 466
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 100/183 (54%), Gaps = 9/183 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
EY++ + V T R +E+I + F++ L+D AY D VYF F Y K
Sbjct: 94 EYYQDADGLQVKRATINPRATEYIDEVVEFVKDLIDRGFAY-EIDGDVYFSTKKFEEYGK 152
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L G+N Q K+ P DFA+WKS KPGEP +ES WG GRPGWHIECS MA
Sbjct: 153 LCGQNLEDLQSGARISVDERKKDPMDFAVWKSQKPGEPAWESPWGLGRPGWHIECSCMAK 212
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLRAAR 477
G +D+H GG+DLKFPHHENE AQS A Q ++ NYW+H + +
Sbjct: 213 KLLGDTIDIHGGGMDLKFPHHENEIAQSEAVTGQ-KFANYWMHAAFVNVDNKKMSKSENN 271
Query: 478 FIT 480
F+T
Sbjct: 272 FVT 274
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+++YN +T+ K F+ +K Y CGPTVY+ HIG+ + D IRR LE Y
Sbjct: 1 MRLYNSLTRQKEEFVPIVPGEVKMYVCGPTVYNYFHIGNGRTFIIFDTIRRYLE-YRGYK 59
Query: 92 SIVISSVTDIDDKIINKANS 111
I + TDIDDK+INKAN+
Sbjct: 60 VTFIQNFTDIDDKMINKANA 79
>gi|385329332|ref|YP_005883635.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha710]
gi|308390183|gb|ADO32503.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha710]
Length = 699
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 324 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSG 383
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 384 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 443
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 444 GDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 503
Query: 466 GTDGTR 471
DG +
Sbjct: 504 -VDGEK 508
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 290 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 322
>gi|403054114|ref|ZP_10908598.1| cysteinyl-tRNA ligase [Acinetobacter bereziniae LMG 1003]
Length = 457
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 102/173 (58%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E E G L P A R +++I +Q+ I L++ AY ++ VYF+V+ F Y +L G
Sbjct: 100 EDAENLGCLHPDEAPRATDYIDQMQNMIGHLVNKGAAYPSANGDVYFEVEKFARYGRLSG 159
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R +E + K+ PFDF LWK AK EP + S WG GRPGWHIECSAM++
Sbjct: 160 RKLDDMQAGASERVDVDVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A ++ Q+VNYW+H G + DG +
Sbjct: 220 CLGNHFDIHGGGSDLLFPHHENEIAQSEASTDE-QYVNYWMHVGFI-NVDGEK 270
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ + + H+ Y CG TVYD HIGHA V D IIR + +++
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVK- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TDIDDKII +AN E + R+ +
Sbjct: 65 -YVRNITDIDDKIIARANENGESITALTDRFIQAM 98
>gi|390566443|ref|ZP_10246825.1| cysteinyl-tRNA synthetase [Nitrolancetus hollandicus Lb]
gi|390170307|emb|CCF86174.1| cysteinyl-tRNA synthetase [Nitrolancetus hollandicus Lb]
Length = 466
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 99/168 (58%), Gaps = 8/168 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
++ + P T R ++ I IQ IQ L+++ AY +D V++ V SFP Y K
Sbjct: 96 DWLTETAALNIKPATIYPRATQEIDVIQEIIQGLINSGHAY-AADGDVFYRVLSFPGYGK 154
Query: 365 LWGRN-ENITQHAV------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L R E + A K P DF LWK+AKPGEP +ES WG GRPGWHIECSAM
Sbjct: 155 LSKRQIEEMLAGARVEVDPRKEHPMDFVLWKAAKPGEPAWESPWGPGRPGWHIECSAMII 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
H G +D+H GG DL FPHHENE AQS AF Q+ WV YW+H G L+
Sbjct: 215 HHLGNAIDIHGGGSDLIFPHHENEIAQSEAFLAQAPWVRYWIHNGLLQ 262
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
+KI N +T K F ++ Y CGPTVY HIGHA+ + D+IRR LE+ H
Sbjct: 2 ALKITNTLTGRKEVFEPLEPGRVRMYVCGPTVYSEAHIGHAMSAIIFDVIRRYLEYAGH- 60
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSI-PTRGHAVCN 149
+ + TDIDDKII +A +L + +A+R LI L + +I P +
Sbjct: 61 EVTFVQNFTDIDDKIIQRAATLGIPPEELAER----LIRDWLTETAALNIKPATIYPRAT 116
Query: 150 VKLDIIRRILE 160
++D+I+ I++
Sbjct: 117 QEIDVIQEIIQ 127
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKR 197
GHA+ + D+IRR LE+ H + + TDIDDKII +A +L + +A+R
Sbjct: 40 GHAMSAIIFDVIRRYLEYAGH-EVTFVQNFTDIDDKIIQRAATLGIPPEELAER 92
>gi|392959715|ref|ZP_10325196.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
gi|421056356|ref|ZP_15519274.1| cysteinyl-tRNA synthetase [Pelosinus fermentans B4]
gi|421070069|ref|ZP_15531206.1| cysteinyl-tRNA synthetase [Pelosinus fermentans A11]
gi|392438194|gb|EIW16052.1| cysteinyl-tRNA synthetase [Pelosinus fermentans B4]
gi|392448807|gb|EIW25984.1| cysteinyl-tRNA synthetase [Pelosinus fermentans A11]
gi|392456099|gb|EIW32858.1| Cysteinyl-tRNA synthetase [Pelosinus fermentans DSM 17108]
Length = 481
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 104/172 (60%), Gaps = 9/172 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY YFE M+K + VS+ + I + ++ L+ AYI D VY+ V+ F
Sbjct: 92 RYIASYFEVMDKLNIRRADIYPTVSDHMTEIINIVEGLVAKGYAYI-VDGDVYYSVEKFN 150
Query: 361 HYFKLWGRN-ENITQHAV------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL GR+ E++ A K P DFALWKSAKPGEP +ES WGKGRPGWHIEC+
Sbjct: 151 DYGKLSGRDIEDMKAGARVDVDERKHHPMDFALWKSAKPGEPAWESPWGKGRPGWHIECT 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQ-WVNYWLHTGHL 464
AM+ + G D H GG DL FPHHENE AQS AF +SQ +V YWLH G +
Sbjct: 211 AMSLKYLGNSFDFHGGGSDLIFPHHENEIAQSEAFVEESQPFVRYWLHNGFI 262
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEH---- 86
+K+YN +T+ K FI +K Y CG T Y+ PHIG+A + D+I+R LEH
Sbjct: 2 ALKVYNTMTRQKEEFIPHEAGKVKMYVCGVTPYNHPHIGNARPFITWDVIKRYLEHCRYE 61
Query: 87 YFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
FH+ + TD+DDKII AN+ + +A RY
Sbjct: 62 VFHVQNF-----TDVDDKIIKAANTEGVTWDVIANRY 93
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 14/108 (12%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPTR----GHAVCNVKLDIIRRILEH----YFHIHSIV 169
T K F+P + V G P G+A + D+I+R LEH FH+ +
Sbjct: 10 TRQKEEFIPHEAGKVKMYVCGVTPYNHPHIGNARPFITWDVIKRYLEHCRYEVFHVQNF- 68
Query: 170 ISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQKVVRKLAI 217
TD+DDKII AN+ + +A RY F+++ + +R+ I
Sbjct: 69 ----TDVDDKIIKAANTEGVTWDVIANRYIASY-FEVMDKLNIRRADI 111
>gi|389606841|emb|CCA45752.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha522]
Length = 699
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 324 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 383
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 384 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 443
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 444 GDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 503
Query: 466 GTDGTR 471
DG +
Sbjct: 504 -VDGEK 508
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 290 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 322
>gi|329936176|ref|ZP_08285969.1| cysteinel-tRNA ligase [Streptomyces griseoaurantiacus M045]
gi|329304286|gb|EGG48166.1| cysteinel-tRNA ligase [Streptomyces griseoaurantiacus M045]
Length = 466
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 104/172 (60%), Gaps = 9/172 (5%)
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFD 355
+ + E + E G LPPT R + I + ++TL++ AY +D +VYFD
Sbjct: 87 WAIGYENERAFNEGYTALGCLPPTYEPRATGHITEMVEMMRTLIERGHAY-EADGNVYFD 145
Query: 356 VDSFPHYFKLWGRN-ENITQ-----HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWH 409
V SFP Y +L + +N+ Q KR P DFALWK+AKPGEP +E+ WG GRPGWH
Sbjct: 146 VRSFPGYLELSNQELDNLQQPSSGGETGKRDPRDFALWKAAKPGEPTWETPWGPGRPGWH 205
Query: 410 IECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHT 461
+ECSAMA + G D+H GG+DL FPHHENE AQ+ A+ + ++ YWLH
Sbjct: 206 LECSAMAHKYLGSAFDIHGGGLDLIFPHHENEIAQAKAYGD--EFARYWLHN 255
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I++Y+ + F+ + Y CG TV +PHIGH + DI+RR Y
Sbjct: 3 IRLYDTSARQIRDFVPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDILRRWFA-YRGYD 61
Query: 92 SIVISSVTDIDDKIINKA 109
+ +VTDIDDKII K+
Sbjct: 62 VTFVRNVTDIDDKIITKS 79
>gi|385337194|ref|YP_005891067.1| cysteinyl-tRNA synthetase [Neisseria meningitidis WUE 2594]
gi|319409608|emb|CBY89907.1| cysteinyl-tRNA synthetase (cysteine-tRNA ligase; CysRS) [Neisseria
meningitidis WUE 2594]
Length = 699
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 324 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 383
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 384 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 443
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 444 GDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 503
Query: 466 GTDGTR 471
DG +
Sbjct: 504 -VDGEK 508
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 290 V-RNITDIDDKIIARAAENGETIGKLTARFIQAM 322
>gi|304388715|ref|ZP_07370773.1| cysteine--tRNA ligase [Neisseria meningitidis ATCC 13091]
gi|304337279|gb|EFM03455.1| cysteine--tRNA ligase [Neisseria meningitidis ATCC 13091]
Length = 699
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 103/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 324 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 383
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 384 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 443
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCA-------------FHNQS--QWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS H QS V YWLH G +R
Sbjct: 444 GDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIR 503
Query: 466 GTDGTR 471
DG +
Sbjct: 504 -VDGEK 508
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L ++ +
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYLLTY 289
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 290 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 322
>gi|41614851|ref|NP_963349.1| hypothetical protein NEQ055 [Nanoarchaeum equitans Kin4-M]
gi|61216257|sp|Q74MI1.1|SYC_NANEQ RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|40068575|gb|AAR38910.1| NEQ055 [Nanoarchaeum equitans Kin4-M]
Length = 457
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 108/167 (64%), Gaps = 11/167 (6%)
Query: 307 FESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL- 365
F+ +++ VLP RV+ I I + +++LLD AY G +S+YFDVD +P+Y +L
Sbjct: 97 FDVLKELKVLPFYVYPRVTYHIDDIANAVKSLLDRGYAYKGK-YSIYFDVDKYPYYGQLS 155
Query: 366 -------WGRNENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
W + +++ + K++P+DFALWK +PGEP++ + G+GRPGWHIECS M+S
Sbjct: 156 GIKSKKEWEQEKHLLED--KKNPYDFALWKFKQPGEPYWNTIVGEGRPGWHIECSVMSSK 213
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
+ G + D+H GG DL FPHHENE AQS +N WV YW+H G ++
Sbjct: 214 YLGERFDIHLGGSDLIFPHHENEIAQSETLYNVHPWVRYWVHIGMVQ 260
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
+YN +T K FI + +K Y CG T YD H+GH + D++RRIL + + I
Sbjct: 4 LYNTLTSRKEAFIPLEEPFVKMYTCGVTPYDKAHVGHLRTYLVTDLLRRIL-RFLGYYDI 62
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQ 134
+++ TDIDDKII K+ L +D+K + + + +F +L +
Sbjct: 63 AVTNFTDIDDKIIKKSQELNKDWKEIVEEN-IKYVFDVLKE 102
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPTR----GHAVCNVKLDIIRRILEHYFHIHSIVISSV 173
T K F+PL + G P GH + D++RRIL + + I +++
Sbjct: 9 TSRKEAFIPLEEPFVKMYTCGVTPYDKAHVGHLRTYLVTDLLRRIL-RFLGYYDIAVTNF 67
Query: 174 TDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQ 209
TDIDDKII K+ L +D+K + + ++ +F +L +
Sbjct: 68 TDIDDKIIKKSQELNKDWKEIVEEN-IKYVFDVLKE 102
>gi|402758353|ref|ZP_10860609.1| cysteinyl-tRNA ligase [Acinetobacter sp. NCTC 7422]
Length = 473
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 100/173 (57%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E G P A + +E+I +Q+ I TL+D AY ++ VYF+V F +Y +L G
Sbjct: 100 EDAANLGCAEPDEAPKATEYIDQMQNMIGTLVDKGAAYPAANGDVYFEVSKFNNYGRLSG 159
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R +E + K+ PFDF LWK AK EP + S WG GRPGWHIECSAM++
Sbjct: 160 RKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPAWASPWGNGRPGWHIECSAMSTC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A + Q+VNYW+H G + DG +
Sbjct: 220 CLGNHFDIHGGGSDLMFPHHENEIAQSEASTGE-QYVNYWMHVGFI-NVDGEK 270
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ + + + Y CG TVYD HIGHA V D IIR + + +
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVR- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
I ++TDIDDKII +AN E + + R+ +
Sbjct: 65 -YIRNITDIDDKIIARANENGESIQQLTARFIQAM 98
>gi|406892373|gb|EKD37740.1| hypothetical protein ACD_75C01015G0004 [uncultured bacterium]
Length = 490
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 108/187 (57%), Gaps = 9/187 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E++ M+K G+ P + +E I + + I+ L+ +AY S + VY+ VDSFP
Sbjct: 92 RFIREFYVDMDKLGINRPDIEPKATEHISEMIALIEELISKGKAY-PSGNDVYYIVDSFP 150
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL RN I+ + KR+P DF LWK +KPGEP +ES WG GRPGWHIECS
Sbjct: 151 DYGKLSKRNVEDMQAGARISINEQKRNPLDFVLWKGSKPGEPTWESPWGPGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRL 473
AM+ + G D+H GG DL FPHHENE AQS H ++ + N W+H G + D
Sbjct: 211 AMSRKYLGETFDIHGGGQDLIFPHHENEIAQSEGVHGKA-FANLWIHHGFVTIRDEKMSK 269
Query: 474 RAARFIT 480
F+T
Sbjct: 270 SLGNFLT 276
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++I+N ++ K H+K Y CG T YD HIGHA + D+I L+ F H
Sbjct: 3 MRIHNTLSGKKETLQTLEPGHVKLYVCGITSYDYCHIGHARSALAFDMIVNYLK--FRGH 60
Query: 92 SIV-ISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + + TDIDDKII +A + + +A R+
Sbjct: 61 KVTYVRNFTDIDDKIIARAAEQQTSAEELAARF 93
>gi|71065916|ref|YP_264643.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
gi|109894925|sp|Q4FRZ9.1|SYC_PSYA2 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71038901|gb|AAZ19209.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
Length = 488
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 101/178 (56%), Gaps = 9/178 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E G P R +++I +Q I+TL+ AY G + VY+ VDSF
Sbjct: 103 RFITAMHEDATALGCQSPNAEPRATDYIDEMQQMIETLVSNDYAYAGDNGDVYYAVDSFA 162
Query: 361 HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL RN + Q KR+PFDF LWK+AKP EP + S+WG+GRPGWHIECS
Sbjct: 163 DYGKLSKRNLDDMQAGSRVEVENDKRNPFDFVLWKAAKPDEPQWVSSWGQGRPGWHIECS 222
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
AM++ G D+H GG DL+FPHHENE AQS A ++ W+H G + DG +
Sbjct: 223 AMSTKCLGNTFDIHGGGHDLQFPHHENEIAQSEAATG-CEYARNWMHVGFIN-VDGEK 278
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IY+ +T K F + + Y CG TVYD HIGHA V D+ R L + +
Sbjct: 16 IYDSLTGRKQSFKPLVEGKVGMYVCGMTVYDYCHIGHARVMVGFDMAVRWLAQLGYDVNY 75
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E+ + +R+ +
Sbjct: 76 V-RNITDIDDKIIARAAENGEEIGALTQRFITAM 108
>gi|383826111|ref|ZP_09981253.1| cysteinyl-tRNA synthetase [Mycobacterium xenopi RIVM700367]
gi|383333873|gb|EID12321.1| cysteinyl-tRNA synthetase [Mycobacterium xenopi RIVM700367]
Length = 469
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 104/166 (62%), Gaps = 8/166 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E+ + + GVLPP+ R + I + I+ L+D+ AY G+ VYFDV S+P
Sbjct: 97 YEREFTAAYDALGVLPPSAEPRATGHITQMVELIERLIDSGHAYPGNG-DVYFDVLSYPE 155
Query: 362 YFKLWG-RNENITQHAV----KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
Y +L G R E++ Q KR DF LWK+AKPGEP + + WG+GRPGWH+ECSAMA
Sbjct: 156 YGRLSGHRIEDVHQGEGAAPGKRDQRDFTLWKAAKPGEPSWPTPWGRGRPGWHLECSAMA 215
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
+ G + D+H GG+DL FPHHENE AQS A + + YWLH G
Sbjct: 216 RTYLGSEFDIHCGGMDLVFPHHENEIAQSRAAGD--GFARYWLHNG 259
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRR-ILEHYFHI 90
+++++ + FI H+ Y CG TV PHIGH V DI+RR ++ + +
Sbjct: 7 LRLHDTASGAVRDFIPLRPGHVSIYLCGATVQGLPHIGHVRSAVAFDILRRWLIARGYDV 66
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I +VTDIDDKI+NKA + + A Y
Sbjct: 67 --AFIRNVTDIDDKILNKAAAAGRPWWEWAATY 97
>gi|387823873|ref|YP_005823344.1| cysteinyl-tRNA synthetase [Francisella cf. novicida 3523]
gi|328675472|gb|AEB28147.1| Cysteinyl-tRNA synthetase [Francisella cf. novicida 3523]
Length = 459
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 98/161 (60%), Gaps = 8/161 (4%)
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNEN 371
+ +L P++ + +E IP + + I+TL++ AY G++ V++ V F Y KL +N
Sbjct: 101 RLNILKPSKEPKATETIPEMIAMIETLIEKGYAYQGANGDVFYRVSKFADYGKLSKQNLE 160
Query: 372 ITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQV 424
Q K +P DF LWK AK GEP ++S WG GRPGWHIECSAM+ G
Sbjct: 161 ALQQGSRVDVVEEKENPIDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTF 220
Query: 425 DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
D+H GG DL+FPHHENE AQS A N+ + NYWLH+G ++
Sbjct: 221 DIHAGGSDLRFPHHENEIAQSEAC-NECTFANYWLHSGMVK 260
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 35 YNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIV 94
YN ++ K F N +K YACG TVYD HIGHA + D+I R + Y +
Sbjct: 4 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFK-YRGYDVTL 62
Query: 95 ISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +AN E + +R
Sbjct: 63 VRNITDIDDKIIKRANENGESTTELVER 90
>gi|123477243|ref|XP_001321790.1| cysteinyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
gi|121904623|gb|EAY09567.1| cysteinyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
Length = 660
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 106/186 (56%), Gaps = 18/186 (9%)
Query: 303 ELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH- 361
E +F ++ + P RVSE IP I FI L + AY S+ SVYFDV+ F H
Sbjct: 110 EKAFFAELDTLNIRRPDALLRVSEVIPEIIEFISNLEEKSFAY-ESEGSVYFDVEKFEHD 168
Query: 362 ----YFKLW-------GRNENITQ-HAVKRSPFDFALWKSAKPGEP----WYESAWGKGR 405
Y +L ++EN KR+ DFALWK AKP E ++E+ WG+GR
Sbjct: 169 GRFVYAELERQSYLGTAKSENPEDMQEKKRNRNDFALWKKAKPEEEAAGQYWETKWGRGR 228
Query: 406 PGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
PGWHIECS M+ F+G Q DLH GGIDL+FPHH NE AQS A + WV W+HTG LR
Sbjct: 229 PGWHIECSTMSGLFYGPQFDLHAGGIDLRFPHHSNEIAQSQARWEKVPWVRNWMHTGTLR 288
Query: 466 GTDGTR 471
+G +
Sbjct: 289 AANGEK 294
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 57/96 (59%)
Query: 23 SLPSGYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRR 82
S P DTGIKIYN + VP + L+ Y CGPTVY + H+GHA + D+IRR
Sbjct: 2 STPEFVDTGIKIYNSLGANIVPLKREKGLPLRCYTCGPTVYSTSHLGHARTYLSFDMIRR 61
Query: 83 ILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKT 118
IL YF+I +VTDIDDKIIN N + +D K
Sbjct: 62 ILTDYFNIPVQWSMNVTDIDDKIINTFNGMSDDKKA 97
>gi|428218169|ref|YP_007102634.1| cysteinyl-tRNA synthetase [Pseudanabaena sp. PCC 7367]
gi|427989951|gb|AFY70206.1| cysteinyl-tRNA synthetase [Pseudanabaena sp. PCC 7367]
Length = 485
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 98/173 (56%), Gaps = 14/173 (8%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI-GSDHSVYFDVDSF 359
RY Y E M + ++P R +E I I I+ L AY G D VY+ V F
Sbjct: 92 RYIATYNEDMARLNIMPADEYPRATESIEAIIDLIKALEAQDYAYAAGGD--VYYAVQKF 149
Query: 360 PHYFKLWGRNENITQ----------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWH 409
P Y KL GR Q +KR PFDFALWK+AKPGEP+++S WG+GRPGWH
Sbjct: 150 PTYGKLSGRKLADMQAGASGRVAVGEELKRYPFDFALWKAAKPGEPFWQSPWGEGRPGWH 209
Query: 410 IECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
IECSAM G Q+D+H GG DL+FPHHENE AQS +Q YWLH G
Sbjct: 210 IECSAMVRSRLGDQIDIHAGGADLQFPHHENEIAQSEGATHQP-LARYWLHNG 261
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 33 KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHS 92
++YN +T+ K +K Y CG TVYD H+GHA V D++RR L+ +
Sbjct: 4 QVYNSLTRQKEELQTLEPGQIKMYVCGVTVYDFCHLGHARAYVVWDMVRRYLQSR-NYQV 62
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
+ ++TDIDDKI+ +A + ++ RY
Sbjct: 63 RYVQNITDIDDKILKRAQQEGVTMQEISDRYI 94
>gi|377557025|ref|ZP_09786691.1| Cysteinyl-tRNA synthetase [Lactobacillus gastricus PS3]
gi|376166671|gb|EHS85560.1| Cysteinyl-tRNA synthetase [Lactobacillus gastricus PS3]
Length = 469
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 112/193 (58%), Gaps = 15/193 (7%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY + E V P T R +E+IP I +F+Q L+D AY+ D VY+ F
Sbjct: 91 RYIQAFNEDTTALNVEPATDHPRATEYIPQIITFVQKLIDNGYAYV-VDGDVYYRARHFK 149
Query: 361 HYFKLWGRN-----ENITQH------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWH 409
+Y L G++ ++H A K P DFALWK+AKPGE +ES WGKGRPGWH
Sbjct: 150 NYGALSGQSIDDLETGASEHVDPEEVAKKEDPLDFALWKAAKPGEINWESPWGKGRPGWH 209
Query: 410 IECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR-GTD 468
IECS M++ FG D+H GG DL+FPHHENE AQS A + ++VNYW+H G + G D
Sbjct: 210 IECSVMSTDHFGPTFDIHAGGQDLQFPHHENEIAQSEAATGE-KFVNYWMHNGFVTIGQD 268
Query: 469 GTRRLRA-ARFIT 480
+ ++ F+T
Sbjct: 269 NEKMSKSLGNFVT 281
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +++ K F +K Y CGPTVY+ HIG+A V D +RR E F +
Sbjct: 2 LKIYNTLSRQKEVFQPMTPGVIKMYVCGPTVYNYIHIGNARSIVAFDTVRRYFE--FRGY 59
Query: 92 SI-VISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ +S+ TD+DDK+I A +A RY
Sbjct: 60 EVQYVSNFTDVDDKMIKAAKEEGITVPQLADRY 92
>gi|427828191|ref|ZP_18995209.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|316983974|gb|EFV62953.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
Length = 587
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 212 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 271
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 272 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 331
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 332 GDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 391
Query: 466 GTDGTR 471
DG +
Sbjct: 392 -VDGEK 396
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 118 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 177
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 178 V-RNITDIDDKIIARAAENGETIGKLTARFIQAM 210
>gi|121635739|ref|YP_975984.1| cysteinyl-tRNA synthetase [Neisseria meningitidis FAM18]
gi|120867445|emb|CAM11217.1| cysteinyl-tRNA synthetase [Neisseria meningitidis FAM18]
Length = 699
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 103/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 324 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 383
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 384 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 443
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCA-------------FHNQS--QWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS H QS V YWLH G +R
Sbjct: 444 GDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIR 503
Query: 466 GTDGTR 471
DG +
Sbjct: 504 -VDGEK 508
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 289
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 290 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 322
>gi|339444386|ref|YP_004710390.1| hypothetical protein EGYY_07930 [Eggerthella sp. YY7918]
gi|338904138|dbj|BAK43989.1| hypothetical protein EGYY_07930 [Eggerthella sp. YY7918]
Length = 529
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 101/180 (56%), Gaps = 18/180 (10%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
Y + E M K VL PT + +E IP + I L+++ AY D VYF V S+P
Sbjct: 116 YTQAFIEDMHKVNVLDPTVRPKATEEIPSMLELIAELIESGHAY-EVDGDVYFSVRSYPA 174
Query: 362 YFKLWGRNENITQHA----------------VKRSPFDFALWKSAKPGEPWYESAWGKGR 405
Y +L GRN + + KR P DFALWK+AKPGEP +ES WG GR
Sbjct: 175 YGELSGRNVDEMESGHRELRAESTGAANVADRKRDPLDFALWKAAKPGEPAWESPWGMGR 234
Query: 406 PGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
PGWHIECSAM+ + G D+H GG DL FPHHENE AQS A + N+W+H G L+
Sbjct: 235 PGWHIECSAMSRKYLGLPFDIHGGGGDLVFPHHENERAQSEAACG-CTFANHWMHGGMLQ 293
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Query: 30 TGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
T I++Y+ +TKV F + + + Y CGPTVY+ H+G+A + D+IRR YF
Sbjct: 24 TMIRLYDTKRRTKVDFESRERGKVGMYVCGPTVYNYIHVGNARTFISFDVIRR----YFM 79
Query: 90 IHSIVIS---SVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHA 146
++ ++TD+DDKII KAN VA Y I + +H+ V R A
Sbjct: 80 WRGFDVTYVWNITDVDDKIIAKANEEGRSAADVAAEYTQAFI-EDMHKVNVLDPTVRPKA 138
Query: 147 VCNV--KLDIIRRILE--HYFHIHSIVISSV 173
+ L++I ++E H + + V SV
Sbjct: 139 TEEIPSMLELIAELIESGHAYEVDGDVYFSV 169
>gi|91774855|ref|YP_544611.1| cysteinyl-tRNA synthetase [Methylobacillus flagellatus KT]
gi|122985612|sp|Q1H417.1|SYC_METFK RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|91708842|gb|ABE48770.1| cysteinyl-tRNA synthetase [Methylobacillus flagellatus KT]
Length = 455
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 99/168 (58%), Gaps = 8/168 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GV P R +++I + + I L++ AY + VY+ V SF Y KL G
Sbjct: 98 EDAARLGVWRPDLEPRATDYIHEMIAMIVALIEKHHAYAADNGDVYYAVSSFASYGKLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + A KR P DF LWK+AKPGEP ++S WG GRPGWHIECSAM +
Sbjct: 158 KSLEDLRAGERVEVDAHKRDPMDFVLWKAAKPGEPSWDSPWGPGRPGWHIECSAMGARHL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTD 468
G D+H GG DL+FPHHENE AQS H + +VNYW+H G +R D
Sbjct: 218 GPHFDIHGGGQDLQFPHHENEIAQSEGAHGCT-FVNYWMHNGFIRVDD 264
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN + + K F + Y CG TVYD H+GHA V D++ R L +
Sbjct: 2 LKIYNTLARAKQTFSPIIPGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRSSGY-E 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TDIDDKII +AN E + R+ +
Sbjct: 61 VTYVRNITDIDDKIIARANENGETINALTDRFIAAM 96
>gi|86147083|ref|ZP_01065400.1| cysteinyl-tRNA synthetase [Vibrio sp. MED222]
gi|85835148|gb|EAQ53289.1| cysteinyl-tRNA synthetase [Vibrio sp. MED222]
Length = 461
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 92/152 (60%), Gaps = 8/152 (5%)
Query: 318 PTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENITQ--- 374
P R +EFI I ++ L+ AY+ S+ V F+V F Y KL ++ Q
Sbjct: 108 PDVEPRATEFITEIIELVEKLIQRGFAYVASNGDVMFEVKKFDEYGKLSKQDLEQLQAGA 167
Query: 375 ----HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGG 430
+ KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S G D+H GG
Sbjct: 168 RVDIDSAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGG 227
Query: 431 IDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
DL+FPHHENE AQSC H +Q+VN W+H+G
Sbjct: 228 SDLQFPHHENEIAQSCCAHG-TQYVNTWMHSG 258
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +AN E ++ +R
Sbjct: 61 LNFVRNITDIDDKIIKRANENGESCDSLTER 91
>gi|384424847|ref|YP_005634205.1| cysteinyl-tRNA synthetase [Vibrio cholerae LMA3984-4]
gi|327484400|gb|AEA78807.1| Cysteinyl-tRNA synthetase [Vibrio cholerae LMA3984-4]
Length = 459
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R + +I I + ++ L++ AY+ + V F+V + Y K
Sbjct: 95 EMYADFDALNIKRPDVEPRATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGK 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ + Q A KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSKQDLDQLQAGARVDIEAAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 215 SILGTHFDIHGGGSDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y +
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYL-RYLGYN 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLI--FKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +A E +++ +R + F L+ K P R A
Sbjct: 61 LTFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEP-RATAYIE 119
Query: 150 VKLDIIRRILEHYF 163
+ ++ R++E F
Sbjct: 120 EIIALVERLIERGF 133
>gi|212223750|ref|YP_002306986.1| cysteinyl-tRNA synthetase [Thermococcus onnurineus NA1]
gi|229558797|sp|B6YUQ3.1|SYC_THEON RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|212008707|gb|ACJ16089.1| cysteinyl-tRNA synthetase [Thermococcus onnurineus NA1]
Length = 476
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 104/169 (61%), Gaps = 14/169 (8%)
Query: 304 LEYF-ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHY 362
L YF E M+ V P RV+E I I F++ L + AY G+D VYF+V F Y
Sbjct: 94 LRYFLEDMKALKVKPADIYPRVTEHIQDIIDFVRKLQEKGYAYEGND-GVYFEVRKFKDY 152
Query: 363 FKLWG-RNENITQHAV------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAM 415
KL G + E + + A K++P DFALWK AKPGEP +ES WG+GRPGWHIECS M
Sbjct: 153 GKLSGIKLEELVKGARVEPGEGKKNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTM 212
Query: 416 ASHFFGGQVDLHTGGIDLKFPHHENEEAQS--CAFHNQSQWVNYWLHTG 462
++ + G D+H GG DL FPHHENE AQS C H +WV YWLHTG
Sbjct: 213 STKYLGESFDIHGGGNDLIFPHHENEIAQSEACTGH---EWVRYWLHTG 258
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 76/133 (57%), Gaps = 6/133 (4%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
I++YN +TK K F + ++ Y CGPTVYD H+GHA + D+IRR LEH +
Sbjct: 2 AIRVYNTLTKQKEEFRPLREGEVRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHRGYT 61
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAK---RYFLPLIFKILHQKVVGSIPTRGHAV 147
+++ + TDIDDKII +AN ED K +A+ RYFL + K L K P +
Sbjct: 62 -VLMVMNFTDIDDKIIRRANETGEDPKELAEKFLRYFLEDM-KALKVKPADIYPRVTEHI 119
Query: 148 CNVKLDIIRRILE 160
++ +D +R++ E
Sbjct: 120 QDI-IDFVRKLQE 131
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA + D+IRR LEH + +++ + TDIDDKII +AN ED K +A++ FLR
Sbjct: 40 GHARTYIAFDVIRRYLEHRGYT-VLMVMNFTDIDDKIIRRANETGEDPKELAEK-FLRYF 97
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGKV 263
+ D+K KV + + E +++ +++++ ++ DG
Sbjct: 98 LE------------DMKALKVKPADIYPRVTEHIQDIIDFVRKLQEKGY--AYEGNDGVY 143
Query: 264 FSDRVF 269
F R F
Sbjct: 144 FEVRKF 149
>gi|284048089|ref|YP_003398428.1| cysteinyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
gi|283952310|gb|ADB47113.1| cysteinyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
Length = 481
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 103/178 (57%), Gaps = 9/178 (5%)
Query: 292 VVFEFLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHS 351
V ++ + N RY YFE M+K V RVSE IP I +Q L++ Y+ D
Sbjct: 84 VTWDVIAN-RYIKAYFEVMDKLHVKRAHIYPRVSEHIPDIIHTVQELINNGYGYV-VDGD 141
Query: 352 VYFDVDSFPHYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKG 404
VY+ V+ F HY +L GR + K +P DFALWKSAKPGEP ++S WGKG
Sbjct: 142 VYYRVERFSHYGELSGRKLDDMMAGARVDVDERKENPMDFALWKSAKPGEPSWDSPWGKG 201
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
RPGWHIECS M++ + G +D H GG DL FPHHENE AQS +V YW+H G
Sbjct: 202 RPGWHIECSTMSTKYLGNTLDFHGGGSDLIFPHHENEIAQSEGATGVHPFVRYWVHNG 259
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
I++YN +T+ K F+ + + Y CG T Y+ PHIG+A V D IRR L+H +
Sbjct: 3 IRVYNDMTRQKEEFVPLHPGKVGIYVCGVTPYNHPHIGNARPFVVWDTIRRFLDHEGY-D 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
+ + TD+DDKII AN + +A RY
Sbjct: 62 VTYVQNFTDVDDKIIRAANEEGVTWDVIANRYI 94
>gi|442803750|ref|YP_007371899.1| cysteine--tRNA ligase CysS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442739600|gb|AGC67289.1| cysteine--tRNA ligase CysS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 462
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/171 (47%), Positives = 102/171 (59%), Gaps = 9/171 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y EY+ G+ PT A R +E I I I+TL+D AY+ D VYF F
Sbjct: 90 KYIREYYVDAHGLGIKDPTYAPRATENIDAIIDMIKTLVDKGYAYV-VDGDVYFKTSKFE 148
Query: 361 HYFKLWG-RNENITQHAV------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL G R E++ A K + DFALWK+ KPGEP ++S WGKGRPGWHIECS
Sbjct: 149 EYGKLSGHRLEDLELGARIEVDERKENAMDFALWKAQKPGEPAWDSPWGKGRPGWHIECS 208
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AMA+ + G +D+H+GG DL FPHHENE AQS A N + YWLH G +
Sbjct: 209 AMANRYLGETIDIHSGGQDLIFPHHENEIAQSEAC-NGKPFARYWLHNGFI 258
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 57/90 (63%), Gaps = 4/90 (4%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +TK K FI +K Y+CGPTVYD HIG+A + D++RR LE Y
Sbjct: 1 MKLYNTLTKRKEEFIPLKPGEVKMYSCGPTVYDYFHIGNARPFIIFDVLRRFLE-YRGYK 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAK 121
I + + TDIDDK+I +AN E+ KTVA+
Sbjct: 60 VIFVQNFTDIDDKMIRRAN---EEGKTVAE 86
>gi|71906558|ref|YP_284145.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
gi|109894895|sp|Q47HK6.1|SYC_DECAR RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|71846179|gb|AAZ45675.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
Length = 456
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 95/165 (57%), Gaps = 8/165 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GV P R +E++P + I L AY SD V + V FP Y KL G
Sbjct: 98 EDADALGVQRPDYEPRATEYVPEMLDLIGKLEANGLAYQASDGDVNYAVRKFPGYGKLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + + K+ P DF LWK AKPGEP ++S WG GRPGWHIECSAM+S
Sbjct: 158 KSLDDLRAGERVEVDSAKQDPLDFVLWKHAKPGEPAWQSPWGDGRPGWHIECSAMSSKLL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS N +VNYW+H G +R
Sbjct: 218 GQHFDIHGGGQDLQFPHHENEIAQSEG-ANCCNFVNYWMHNGFVR 261
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN + + K F N ++ Y CG TVYD H+GHA V D++ R L+ +
Sbjct: 2 LKIYNSLKREKQVFTPIEPNKVRMYVCGMTVYDYCHLGHARVMVVFDMVYRWLKASGY-D 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ ++TDIDDKII +A E + + R+
Sbjct: 61 VTYVRNITDIDDKIIKRAIENGETIQQLTNRF 92
>gi|422350108|ref|ZP_16430995.1| cysteine-tRNA ligase [Sutterella wadsworthensis 2_1_59BFAA]
gi|404657585|gb|EKB30471.1| cysteine-tRNA ligase [Sutterella wadsworthensis 2_1_59BFAA]
Length = 468
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 99/170 (58%), Gaps = 8/170 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E M G L PT R +++IP + I+ L AY GSD V F V F +Y +L G
Sbjct: 99 EDMLALGCLAPTHEPRATDYIPEMLGLIEKLEQKGYAYQGSDGDVDFAVRKFENYGRLSG 158
Query: 368 RNENITQH-------AVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ + Q A KR P DF LWKSAKPGEP +ES WG GRPGWHIECSAM++
Sbjct: 159 KSIDDLQSGARVDVAAGKRDPLDFVLWKSAKPGEPQWESKWGCGRPGWHIECSAMSAKIL 218
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGT 470
G D+H GG DL FPHHENE AQS A + + W+H+G LR D +
Sbjct: 219 GDTFDIHGGGPDLIFPHHENEIAQSEA-ASGVPFAKVWMHSGPLRVRDAS 267
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ IY+ +++T+ PF NH++ Y CG TVYD HIGH V D++RR LE +
Sbjct: 3 LSIYSTLSRTQAPFAPIEPNHVRMYVCGVTVYDYCHIGHGRTFVAFDVVRRWLEAS-GMK 61
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 62 VTFVRNITDVDDKIIRRA 79
>gi|421263687|ref|ZP_15714715.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. P52VAC]
gi|401689234|gb|EJS84709.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. P52VAC]
Length = 459
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 99/167 (59%), Gaps = 8/167 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + VL P R + IP I + I+ L+ + AY+ ++ V FDV+SF Y K
Sbjct: 95 EMHKDFDALNVLRPDVEPRATHHIPEIIAMIEKLIARQHAYVSANGDVMFDVESFKEYGK 154
Query: 365 LWGRNENITQHA-------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L +N Q VK++P DF LWK +KPGE + S WG+GRPGWHIECSAM
Sbjct: 155 LSRQNLEQLQAGARVEIVNVKKNPMDFVLWKMSKPGETSWPSPWGEGRPGWHIECSAMNH 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
G D+H GG DL FPHHENE AQSC H+ ++VNYW+H+G +
Sbjct: 215 KELGEHFDIHGGGSDLTFPHHENEIAQSCCAHS-GRYVNYWIHSGMI 260
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KI+N +T+ K F + N + Y CG TVYD H+GH V D+I R L Y
Sbjct: 2 LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKA 109
+ ++TD+DDKII +A
Sbjct: 61 LTYVRNITDVDDKIIKRA 78
>gi|407641672|ref|YP_006805431.1| cysteinyl-tRNA ligase [Nocardia brasiliensis ATCC 700358]
gi|407304556|gb|AFT98456.1| cysteinyl-tRNA ligase [Nocardia brasiliensis ATCC 700358]
Length = 476
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 102/166 (61%), Gaps = 8/166 (4%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE + + E GVLPP+ R + I + +Q L++ AY S +VYFDV S+P
Sbjct: 93 YERAFDNAYETLGVLPPSVEPRATGHITQMVDMMQRLIERGHAY-ASAGNVYFDVQSYPE 151
Query: 362 YFKLWG-RNENITQHAV----KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMA 416
Y L G R +++ Q KR P DF LWK+AKPGEP + S WG GRPGWH+ECSAMA
Sbjct: 152 YGSLSGHRLDDVHQGESAGEGKRDPRDFTLWKAAKPGEPTWPSPWGPGRPGWHLECSAMA 211
Query: 417 SHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
+ G + D+H GG+DL FPHHENE AQS A + + NYWLH G
Sbjct: 212 EFYLGSEFDIHCGGMDLVFPHHENEIAQSKAAGD--GFANYWLHNG 255
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRR-ILEHYFHI 90
+++++ T+T F Y CG TV PHIGH V D++RR +L H + +
Sbjct: 3 LRLFDTDTRTTREFAPLVPGRASVYLCGATVQGEPHIGHVRSGVAFDVLRRWLLAHDYDV 62
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I +VTDI+DKI+NKA + A Y
Sbjct: 63 --WFIRNVTDIEDKILNKAAEAGRPWWEWAATY 93
>gi|385792247|ref|YP_005825223.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|328676393|gb|AEB27263.1| Cysteinyl-tRNA synthetase [Francisella cf. novicida Fx1]
Length = 459
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 96/161 (59%), Gaps = 8/161 (4%)
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNEN 371
+ +L P++ R +E IP + + I+TL+ AY G++ V++ V F Y KL +N
Sbjct: 101 RLNILKPSKEPRATETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLE 160
Query: 372 ITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQV 424
Q K +P DF LWK AK GEP + S WG GRPGWHIECSAM+ G
Sbjct: 161 ALQQGSRVDVVEEKENPMDFVLWKMAKKGEPAWNSPWGAGRPGWHIECSAMSKKLLGDTF 220
Query: 425 DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
D+H GG DL+FPHHENE AQS A N+ + NYWLH+G ++
Sbjct: 221 DIHAGGSDLRFPHHENEIAQSEAC-NECTFANYWLHSGMVK 260
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 35 YNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIV 94
YN ++ K F N +K YACG TVYD HIGHA + D+I R + Y +
Sbjct: 4 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFK-YRGYDVTL 62
Query: 95 ISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +AN E + +R
Sbjct: 63 VRNITDIDDKIIKRANENGESTTELVER 90
>gi|302336403|ref|YP_003801610.1| cysteinyl-tRNA synthetase [Olsenella uli DSM 7084]
gi|301320243|gb|ADK68730.1| cysteinyl-tRNA synthetase [Olsenella uli DSM 7084]
Length = 493
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 101/172 (58%), Gaps = 10/172 (5%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
+ + + M +F +L P R + + ++ I+TL++ AY+ + VYF V S
Sbjct: 91 FSCAFIDQMRRFNILDPDIRPRATREVEAMRQMIETLIEKGHAYVAGNGDVYFSVRSDHD 150
Query: 362 YFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
Y L GR+ E + + KR PFDFALWK+AKPGEP + S WG+GRPGWH EC A
Sbjct: 151 YGSLSGRDLDQLRAGERVEVNEDKRDPFDFALWKAAKPGEPSWPSPWGEGRPGWHTECCA 210
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQS-CAFHNQSQWVNYWLHTGHLR 465
M H+ G +D+H GG DL FPHHENE AQ+ CA+ + N W+H G LR
Sbjct: 211 MIHHYLGTPIDIHGGGQDLVFPHHENECAQALCAW--GAPLANIWMHAGMLR 260
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
+YN T K + H++ Y CGPTVYD HIG+A + D+IRR L Y
Sbjct: 3 VYNSQTHRKEELRPLEEGHIRMYVCGPTVYDQIHIGNARTFLSFDVIRRYLT-YKGYQVT 61
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKI 131
++TD+DDKIIN+AN VA+ + I ++
Sbjct: 62 FAQNLTDVDDKIINRANDEGRSATEVAEEFSCAFIDQM 99
>gi|90411646|ref|ZP_01219656.1| cysteinyl-tRNA synthetase [Photobacterium profundum 3TCK]
gi|90327536|gb|EAS43889.1| cysteinyl-tRNA synthetase [Photobacterium profundum 3TCK]
Length = 464
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + G+ P R +EFI I + + L++ AY+ S+ V F+V F Y +
Sbjct: 95 EMHKDFDALGMKRPDIEPRATEFIAEIITMCERLIERGFAYVASNGDVMFEVSKFEEYGR 154
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ + Q KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSRQDLDQLQAGARVDIDMAKRSPLDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC SQ+VN W+H+G
Sbjct: 215 AILGDHFDIHGGGSDLQFPHHENEIAQSCC-ATGSQYVNTWMHSG 258
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +TK K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNSLTKQKEEFKPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYL-RYSGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +A E ++ +R
Sbjct: 61 LTFVRNITDIDDKIIKRAAENGESCDSLTER 91
>gi|390934101|ref|YP_006391606.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569602|gb|AFK86007.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 464
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 104/171 (60%), Gaps = 9/171 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY EYF+ + G+ T R +E I I F++ L+D AY D +VY+D F
Sbjct: 90 RYIDEYFKDADSLGIKRATFHPRATENIEEIIEFVKKLIDKGFAY-EKDGNVYYDTTKFK 148
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL +N I + K++P DF LWK+AK GEP+++S WGKGRPGWHIECS
Sbjct: 149 DYGKLSHKNIDELKAGARIEVNEDKKNPTDFVLWKAAKEGEPYWDSPWGKGRPGWHIECS 208
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
M++ + G +D+H GG DL FPHHENE AQS A N +++ YW+H G+L
Sbjct: 209 TMSTKYLGKTLDIHAGGPDLIFPHHENEIAQSEA-ANDAEFAKYWMHIGYL 258
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F N N + Y CGPTVY+ HIG+A + D +RR LE Y
Sbjct: 1 MKIYNTLTRRKEEFKPLNDNVVNMYVCGPTVYNFIHIGNARAFIVFDTVRRYLE-YKGYK 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ + TDIDDK+I +++ K +A RY
Sbjct: 60 VNYVQNFTDIDDKLIKRSHEENTTVKELADRY 91
>gi|223478067|ref|YP_002582621.1| cysteinyl-tRNA synthetase [Thermococcus sp. AM4]
gi|214033293|gb|EEB74120.1| Cysteinyl-tRNA synthetase [Thermococcus sp. AM4]
Length = 476
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 104/166 (62%), Gaps = 9/166 (5%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ E M+ V P RV+E + I +F++ L + AY GSD VYF+V F Y KL
Sbjct: 97 FLEDMKALKVKPADVYPRVTEHMDEIINFVKKLEEKGYAYEGSD-GVYFEVRKFKDYGKL 155
Query: 366 WG-RNENITQHAV------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
+ E++ + A KR+P DFALWK AKPGEP +ES WG+GRPGWHIECS M+S
Sbjct: 156 SKIKLEDLVKGARVEPGEGKRNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTMSSK 215
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
+ G D+H GG DL FPHHENE AQS A +WV+YW+HTG L
Sbjct: 216 YLGESFDIHGGGNDLIFPHHENEIAQSEACFGH-EWVHYWMHTGFL 260
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 31 GIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHI 90
I+IYN +T+ K F + ++ Y CGPTVYD PH+GHA + D+IRR LEH +
Sbjct: 2 AIRIYNTLTRQKEEFKPLREGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHRGYT 61
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
+++ + TDIDDKII +AN ED K +A+R+
Sbjct: 62 -VLMVMNFTDIDDKIIKRANETGEDPKELAERFL 94
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 20/156 (12%)
Query: 118 TVAKRYFLPLIFKILHQKVVG----SIPTRGHAVCNVKLDIIRRILEHYFHIHSIVISSV 173
T K F PL + V G P GHA + D+IRR LEH + +++ +
Sbjct: 10 TRQKEEFKPLREGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHRGYT-VLMVMNF 68
Query: 174 TDIDDKIINKANSLKEDYKTVAKRYFLRLIFKILHQKVVRKLAIDLKKAKVDSGPVLTKC 233
TDIDDKII +AN ED K +A+R FLR+ + D+K KV V +
Sbjct: 69 TDIDDKIIKRANETGEDPKELAER-FLRIFLE------------DMKALKVKPADVYPRV 115
Query: 234 DEFRDELLALGVQIKDQKCEATWQFKDGKVFSDRVF 269
E DE++ +++++ ++ DG F R F
Sbjct: 116 TEHMDEIINFVKKLEEKGY--AYEGSDGVYFEVRKF 149
>gi|412992649|emb|CCO18629.1| cysteinyl-tRNA synthetase [Bathycoccus prasinos]
Length = 657
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 96/174 (55%), Gaps = 15/174 (8%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ E ME G L P R ++ + I I L++ AY D VYF VDS Y L
Sbjct: 241 FHEDMEALGCLRPDLEPRATQHVGDIIDLITRLIEKNHAY-AVDGDVYFSVDSLSKYGSL 299
Query: 366 WGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
GRN E + K++P DFALWK+AKP EP +ES WG GRPGWHIECSAM
Sbjct: 300 SGRNQEDNRAGERVVVDGRKKNPADFALWKTAKPNEPVWESPWGNGRPGWHIECSAMIEK 359
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQS-----CAFHNQS--QWVNYWLHTGHLR 465
G +D+H GG DL FPHHENE AQS C H ++V YW+H G ++
Sbjct: 360 LLGPVIDIHGGGQDLVFPHHENELAQSSAACDCEIHKSEDKKFVRYWVHNGFVK 413
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 32 IKIYNPITKTKVPFI--IQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFH 89
+ ++N +++ K F +N N ++ Y CG TVYD HIGHA V D++ R L +
Sbjct: 145 LMLHNTMSRKKEIFKPRAENGNKVQMYVCGVTVYDYSHIGHARVYVAFDVLYRTLRQLGY 204
Query: 90 IHSIVISSVTDIDDKIINKAN 110
+ TDIDDKIIN+AN
Sbjct: 205 -DVTYCRNFTDIDDKIINRAN 224
>gi|208780370|ref|ZP_03247711.1| cysteinyl-tRNA synthetase [Francisella novicida FTG]
gi|208743738|gb|EDZ90041.1| cysteinyl-tRNA synthetase [Francisella novicida FTG]
Length = 464
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 96/161 (59%), Gaps = 8/161 (4%)
Query: 312 KFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNEN 371
+ +L P++ R +E IP + + I+TL+ AY G++ V++ V F Y KL +N
Sbjct: 106 RLNILKPSKEPRATETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLE 165
Query: 372 ITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQV 424
Q K +P DF LWK AK GEP + S WG GRPGWHIECSAM+ G
Sbjct: 166 ALQQGSRVDVVEEKENPMDFVLWKMAKEGEPAWNSPWGAGRPGWHIECSAMSKKLLGDTF 225
Query: 425 DLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
D+H GG DL+FPHHENE AQS A N+ + NYWLH+G ++
Sbjct: 226 DIHAGGSDLRFPHHENEIAQSEAC-NECTFANYWLHSGMVK 265
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 35 YNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIV 94
YN ++ K F N +K YACG TVYD HIGHA + D+I R +Y +
Sbjct: 9 YNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYF-NYRGYDVTL 67
Query: 95 ISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +AN E + +R
Sbjct: 68 VRNITDIDDKIIKRANENGESTTELVER 95
>gi|29830510|ref|NP_825144.1| cysteinyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
gi|61216621|sp|Q82GD0.1|SYC_STRAW RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|29607622|dbj|BAC71679.1| putative cysteinyl-tRNA synthetase [Streptomyces avermitilis
MA-4680]
Length = 466
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 106/172 (61%), Gaps = 9/172 (5%)
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFD 355
+ + E + + + G LPPT R + I + ++TL++ AY +D +VYFD
Sbjct: 87 WAIGYENERAFNDGYDVLGCLPPTYEPRATGHITEMVEMMRTLIERGHAY-EADGNVYFD 145
Query: 356 VDSFPHYFKLWGRN-ENITQ-----HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWH 409
V SFP Y +L + +N+ Q KR P DFA+WK+AKPGEP +E+ WG+GRPGWH
Sbjct: 146 VRSFPEYLQLSNQELDNLLQPSGEGETGKRDPRDFAMWKAAKPGEPTWETPWGRGRPGWH 205
Query: 410 IECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHT 461
+ECSAMA + G D+H GG+DL FPHHENE AQ+ AF + ++ YW+H
Sbjct: 206 LECSAMAHKYLGSAFDIHGGGLDLIFPHHENEIAQAKAFGD--EFARYWVHN 255
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKA 109
Y CG TV +PHIGH + DI+RR E Y I +VTDIDDKII K+
Sbjct: 27 YLCGATVQAAPHIGHIRSGLNFDIMRRWFE-YRGYDVTFIRNVTDIDDKIIAKS 79
>gi|297563235|ref|YP_003682209.1| cysteinyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847683|gb|ADH69703.1| cysteinyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 467
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 102/173 (58%), Gaps = 11/173 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHS--VYFDVDS 358
R + + + E G LPPT R + +P + + L+D AY SD S VYFDV S
Sbjct: 92 RNQRAFTHAYEILGCLPPTVEPRATGHVPEMIDLMHRLIDAGHAYAASDGSGDVYFDVRS 151
Query: 359 FPHYFKLWG-RNENITQHAV------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIE 411
+P Y L R + + + A KR P DFALWK AKPGEP + + WG+GRPGWH+E
Sbjct: 152 YPPYGGLSNQRLDQVVESADCDADRDKRDPRDFALWKGAKPGEPSWHTPWGRGRPGWHLE 211
Query: 412 CSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
CSAMA+ + G D+H GG+DL FPHHENE AQS A + + YWLH G L
Sbjct: 212 CSAMATKYLGPSFDIHGGGLDLVFPHHENELAQSRAAGD--GFAQYWLHNGLL 262
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++ Y+ + F+ + Y CG TV PHIGH V DI+RR L H +
Sbjct: 3 LRFYDTSARQVREFVPLREGAASLYLCGATVQAPPHIGHIRSGVNFDILRRWLTHLGY-D 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
+VTDIDDKII A+ + V++R
Sbjct: 62 VTFCRNVTDIDDKIIRVASDEGVPWWQVSER 92
>gi|433480605|ref|ZP_20437886.1| cysteine--tRNA ligase [Neisseria meningitidis 63041]
gi|433514404|ref|ZP_20471186.1| cysteine--tRNA ligase [Neisseria meningitidis 63049]
gi|433520767|ref|ZP_20477475.1| cysteine--tRNA ligase [Neisseria meningitidis 65014]
gi|433541958|ref|ZP_20498396.1| cysteine--tRNA ligase [Neisseria meningitidis 63006]
gi|432213882|gb|ELK69792.1| cysteine--tRNA ligase [Neisseria meningitidis 63041]
gi|432245366|gb|ELL00836.1| cysteine--tRNA ligase [Neisseria meningitidis 63049]
gi|432251383|gb|ELL06752.1| cysteine--tRNA ligase [Neisseria meningitidis 65014]
gi|432275029|gb|ELL30107.1| cysteine--tRNA ligase [Neisseria meningitidis 63006]
Length = 473
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 218 GNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 96
>gi|421541345|ref|ZP_15987471.1| cysteine--tRNA ligase [Neisseria meningitidis 93004]
gi|402314868|gb|EJU50436.1| cysteine--tRNA ligase [Neisseria meningitidis 93004]
Length = 473
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 218 GNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 96
>gi|262373040|ref|ZP_06066319.1| cysteinyl-tRNA synthetase [Acinetobacter junii SH205]
gi|262313065|gb|EEY94150.1| cysteinyl-tRNA synthetase [Acinetobacter junii SH205]
Length = 473
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 98/173 (56%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E G P A + +E+I +Q+ I L+D AY S+ VYF+V F Y +L G
Sbjct: 100 EDAANLGCAAPDEAPKATEYIDQMQNMISNLVDKGAAYPASNGDVYFEVTKFDKYGRLSG 159
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R +E + K+ PFDF LWK AK EP + S WG GRPGWHIECSAM++
Sbjct: 160 RKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPAWASPWGNGRPGWHIECSAMSTC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A + Q+VNYW+H G + DG +
Sbjct: 220 CLGNHFDIHGGGSDLMFPHHENEIAQSEASTGE-QYVNYWMHVGFI-NVDGEK 270
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ + + + Y CG TVYD HIGHA V D IIR + + +
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVR- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
I ++TDIDDKII +AN E + + R+ +
Sbjct: 65 -YIRNITDIDDKIIARANENGESIQQLTARFIEAM 98
>gi|421648270|ref|ZP_16088677.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-251]
gi|408515631|gb|EKK17214.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-251]
Length = 428
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 99/173 (57%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E G L P A + +E+I +Q+ I L++ AY S+ VYF+V F Y +L G
Sbjct: 55 EDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSG 114
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R +E I K+ PFDF LWK AK EP + S WG GRPGWHIECSAM++
Sbjct: 115 RKLDDMQAGASERIDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTC 174
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A + Q+VNYW+H G + DG +
Sbjct: 175 CLGNHFDIHGGGSDLMFPHHENEIAQSEASTGE-QYVNYWMHVGFI-NVDGEK 225
>gi|385858044|ref|YP_005904556.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
gi|325208933|gb|ADZ04385.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
Length = 473
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 218 GNTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 96
>gi|416214986|ref|ZP_11623197.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240013]
gi|325143495|gb|EGC65816.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240013]
Length = 473
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 218 GDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 96
>gi|416165303|ref|ZP_11607427.1| cysteinyl-tRNA synthetase [Neisseria meningitidis N1568]
gi|433474412|ref|ZP_20431764.1| cysteine--tRNA ligase [Neisseria meningitidis 97021]
gi|433482842|ref|ZP_20440092.1| cysteine--tRNA ligase [Neisseria meningitidis 2006087]
gi|433484856|ref|ZP_20442070.1| cysteine--tRNA ligase [Neisseria meningitidis 2002038]
gi|433487087|ref|ZP_20444274.1| cysteine--tRNA ligase [Neisseria meningitidis 97014]
gi|433537689|ref|ZP_20494180.1| cysteine--tRNA ligase [Neisseria meningitidis 77221]
gi|325127358|gb|EGC50293.1| cysteinyl-tRNA synthetase [Neisseria meningitidis N1568]
gi|432207068|gb|ELK63063.1| cysteine--tRNA ligase [Neisseria meningitidis 97021]
gi|432213680|gb|ELK69591.1| cysteine--tRNA ligase [Neisseria meningitidis 2006087]
gi|432219093|gb|ELK74941.1| cysteine--tRNA ligase [Neisseria meningitidis 2002038]
gi|432220072|gb|ELK75899.1| cysteine--tRNA ligase [Neisseria meningitidis 97014]
gi|432270438|gb|ELL25576.1| cysteine--tRNA ligase [Neisseria meningitidis 77221]
Length = 473
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 218 GDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGKLTARFIQAM 96
>gi|20808681|ref|NP_623852.1| cysteinyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
gi|22257048|sp|Q8R7T3.1|SYC_THETN RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|20517317|gb|AAM25456.1| Cysteinyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
Length = 467
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 104/171 (60%), Gaps = 9/171 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ EYF+ + G+ T R +E I I FI+ L+D AY+ D +VYF+ F
Sbjct: 90 RFIEEYFKDADALGIKRATVHPRATEHIDDIIEFIKILIDKGYAYV-VDGNVYFETAKFK 148
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL +N + K++P DFALWK+ KPGEP ++S WGKGRPGWHIECS
Sbjct: 149 DYGKLSHKNIDELMAGARVEIDEKKKNPLDFALWKAQKPGEPAWDSPWGKGRPGWHIECS 208
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
M++ + G +D+H GG DL FPHHENE AQS A ++Q + YW+H G+L
Sbjct: 209 VMSTKYLGKTLDIHAGGPDLIFPHHENEIAQSEAAYDQP-FSKYWMHIGYL 258
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+++YN +T+TK F + Y CGPTVY+ HIG+A + D +RR LE+ +
Sbjct: 1 MRLYNTMTRTKEEFKPLKDKVVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGYTV 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
+ V + TDIDDKIIN+A K +A+R+
Sbjct: 61 NYV-QNFTDIDDKIINRAKEENTTEKEIAERF 91
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 118 TVAKRYFLPLIFKILHQKVVGSIPTR------GHAVCNVKLDIIRRILEHYFHIHSIVIS 171
T K F PL K+++ V G PT G+A + D +RR LE+ + + V
Sbjct: 8 TRTKEEFKPLKDKVVNMYVCG--PTVYNYIHIGNARAFIVFDTVRRYLEYKGYTVNYV-Q 64
Query: 172 SVTDIDDKIINKANSLKEDYKTVAKRYFLRLIFK 205
+ TDIDDKIIN+A K +A+R F+ FK
Sbjct: 65 NFTDIDDKIINRAKEENTTEKEIAER-FIEEYFK 97
>gi|374335348|ref|YP_005092035.1| cysteinyl-tRNA synthetase [Oceanimonas sp. GK1]
gi|372985035|gb|AEY01285.1| cysteinyl-tRNA synthetase [Oceanimonas sp. GK1]
Length = 459
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 96/169 (56%), Gaps = 8/169 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R E + + + P + + IP I + + TL+ AY+ + V F+V+SF
Sbjct: 91 RLTAEMYRDFDALNIARPDIEPKATGHIPEIIAMVDTLIKDGHAYVADNGDVLFEVNSFA 150
Query: 361 HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L G+N Q KR+P DF LWK +KPGEP ++S WG GRPGWHIECS
Sbjct: 151 DYGRLSGQNLEQLQAGARVEVEQSKRNPLDFVLWKQSKPGEPSWDSPWGPGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM G D+H GG DL+FPHHENE AQSC N S +VN W+H+G
Sbjct: 211 AMNGKHLGKHFDIHGGGSDLQFPHHENEIAQSCC-ANHSPYVNTWMHSG 258
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNSLTRQKEEFKPLVPGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVTRYL-RYAGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +A E + +R
Sbjct: 61 LTFVRNITDIDDKIIKRAAENGESCDALTER 91
>gi|260549524|ref|ZP_05823742.1| cysteinyl-tRNA synthetase [Acinetobacter sp. RUH2624]
gi|424056184|ref|ZP_17793705.1| cysteinyl-tRNA synthetase [Acinetobacter nosocomialis Ab22222]
gi|425739726|ref|ZP_18857922.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-487]
gi|260407317|gb|EEX00792.1| cysteinyl-tRNA synthetase [Acinetobacter sp. RUH2624]
gi|407441224|gb|EKF47730.1| cysteinyl-tRNA synthetase [Acinetobacter nosocomialis Ab22222]
gi|425496120|gb|EKU62262.1| cysteine--tRNA ligase [Acinetobacter baumannii WC-487]
Length = 473
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 99/173 (57%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E G L P A + +E+I +Q+ I L++ AY S+ VYF+V F Y +L G
Sbjct: 100 EDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSG 159
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R +E + K+ PFDF LWK AK EP + S WG GRPGWHIECSAM++
Sbjct: 160 RKLDDMQAGASERVDVEVEKKHPFDFVLWKRAKENEPSWASPWGNGRPGWHIECSAMSTC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A + Q+VNYW+H G + DG +
Sbjct: 220 CLGNHFDIHGGGSDLMFPHHENEIAQSEASTGE-QYVNYWMHVGFI-NVDGEK 270
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ + + H+ Y CG TVYD HIGHA V D IIR + + +
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVR- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I ++TDIDDKII +AN E + + R+
Sbjct: 65 -YIRNITDIDDKIIKRANENGETIQQLTTRF 94
>gi|169796523|ref|YP_001714316.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|213156364|ref|YP_002318784.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|215483986|ref|YP_002326211.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
gi|301346200|ref|ZP_07226941.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB056]
gi|301510179|ref|ZP_07235416.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB058]
gi|301594397|ref|ZP_07239405.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB059]
gi|332853945|ref|ZP_08435065.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332870201|ref|ZP_08439096.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013113]
gi|417572308|ref|ZP_12223162.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC-5]
gi|421644195|ref|ZP_16084680.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-235]
gi|421657702|ref|ZP_16097952.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-83]
gi|421700456|ref|ZP_16139970.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-58]
gi|421799698|ref|ZP_16235688.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC1]
gi|226735042|sp|B7GWA1.1|SYC_ACIB3 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|226735043|sp|B7IBU3.1|SYC_ACIB5 RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|229558611|sp|B0VAU1.1|SYC_ACIBY RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|169149450|emb|CAM87336.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|213055524|gb|ACJ40426.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|213985743|gb|ACJ56042.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
gi|332728301|gb|EGJ59682.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332732368|gb|EGJ63625.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013113]
gi|400207876|gb|EJO38846.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC-5]
gi|404569987|gb|EKA75070.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-58]
gi|408506006|gb|EKK07722.1| cysteine--tRNA ligase [Acinetobacter baumannii IS-235]
gi|408711688|gb|EKL56889.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-83]
gi|410409239|gb|EKP61172.1| cysteine--tRNA ligase [Acinetobacter baumannii Canada BC1]
Length = 473
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 99/173 (57%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E G L P A + +E+I +Q+ I L++ AY S+ VYF+V F Y +L G
Sbjct: 100 EDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSG 159
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R +E I K+ PFDF LWK AK EP + S WG GRPGWHIECSAM++
Sbjct: 160 RKLDDMQAGASERIDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A + Q+VNYW+H G + DG +
Sbjct: 220 CLGNHFDIHGGGSDLMFPHHENEIAQSEASTGE-QYVNYWMHVGFI-NVDGEK 270
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ + + H+ Y CG TVYD HIGHA V D IIR + + +
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVR- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I ++TDIDDKII +AN E + + R+
Sbjct: 65 -YIRNITDIDDKIIKRANENGETIQQLTTRF 94
>gi|159903756|ref|YP_001551100.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
gi|159888932|gb|ABX09146.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
Length = 516
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/169 (47%), Positives = 100/169 (59%), Gaps = 13/169 (7%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E+ + M+ G+L P R R ++ I I+S IQ L + K A ++ VYF V P+Y K
Sbjct: 113 EFHKDMDSLGILRPDRMPRATKCIDGIRSMIQDL-EAKGAAYSTEGDVYFAVMRHPNYGK 171
Query: 365 LWGRNENITQ-----------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
L GR+ + Q A K+ PFDFALWKSAK GEP + S WG GRPGWHIECS
Sbjct: 172 LSGRDLSAQQLNAEGRVTEKEKARKQHPFDFALWKSAKDGEPSFSSPWGSGRPGWHIECS 231
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM G +D+H GG DL FPHHENE AQS A + + NYWLH G
Sbjct: 232 AMVLQELGETIDIHLGGADLVFPHHENEIAQSEAATGK-KLANYWLHNG 279
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 33 KIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRR--ILEHYFHI 90
K+ N +T+ F NH+ Y CG TVYD H+GHA + D++RR I + Y
Sbjct: 21 KLTNTLTQQTEVFNPLKPNHVTIYCCGVTVYDLCHLGHARSYISWDVLRRYFIWQGY--- 77
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ + TDIDDKII++A V++R
Sbjct: 78 KVTFVQNFTDIDDKIISRAAKENSTMNEVSER 109
>gi|255067745|ref|ZP_05319600.1| cysteine--tRNA ligase [Neisseria sicca ATCC 29256]
gi|255047956|gb|EET43420.1| cysteine--tRNA ligase [Neisseria sicca ATCC 29256]
Length = 483
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 103/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 108 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 167
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 168 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 227
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCA-------------FHNQS--QWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS H QS V YWLH G +R
Sbjct: 228 GDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIR 287
Query: 466 GTDGTR 471
DG +
Sbjct: 288 -VDGEK 292
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ +YN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L +
Sbjct: 12 LNLYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLCECGYPL 71
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ V ++TDIDDKII +A E + R+ +
Sbjct: 72 TYV-RNITDIDDKIIARAAENGETIGELTARFIQAM 106
>gi|257784983|ref|YP_003180200.1| cysteinyl-tRNA synthetase [Atopobium parvulum DSM 20469]
gi|257473490|gb|ACV51609.1| cysteinyl-tRNA synthetase [Atopobium parvulum DSM 20469]
Length = 493
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 102/174 (58%), Gaps = 11/174 (6%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ + M +F +L P R + I + IQ+L++ AY VYF V S Y L
Sbjct: 95 FIKQMHRFNILDPDIRPRATHEIEAMLQMIQSLIEQGYAYAVPSGDVYFSVRSDHDYGVL 154
Query: 366 WGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
GR+ E + + KR PFDFALWK+AKPGEP + S WG+GRPGWH EC AM
Sbjct: 155 SGRDLDQLRAGERVEVNDEKRDPFDFALWKAAKPGEPSWSSPWGEGRPGWHSECCAMIHR 214
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQ-SCAFHNQSQWVNYWLHTGHLRGTDGTR 471
+ G +D+H GG DL FPHHENE AQ SCA+H + NYW+HTG LR DG +
Sbjct: 215 YLGTPIDIHGGGSDLVFPHHENETAQASCAWH--APLANYWMHTGMLR-VDGEK 265
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
+YN T K F ++ ++ Y CGPTVYD HIG+A + D+IRR L Y
Sbjct: 3 VYNTQTHKKEEFKPIDEGKIRMYVCGPTVYDQIHIGNARTFLSFDVIRRYL-MYKGFEVT 61
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVK-- 151
++TD+DDKII +AN + V++ + I K +H+ + R A ++
Sbjct: 62 FAQNLTDVDDKIIQRANEQGRTAQEVSEEFSQAFI-KQMHRFNILDPDIRPRATHEIEAM 120
Query: 152 LDIIRRILEHYF 163
L +I+ ++E +
Sbjct: 121 LQMIQSLIEQGY 132
>gi|340624382|ref|YP_004742835.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis X1]
gi|339904650|gb|AEK20092.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis X1]
Length = 476
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 103/164 (62%), Gaps = 9/164 (5%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
+ + M V P +V+E I I +FI+ L++ AY D VYF+V F Y KL
Sbjct: 96 FLDDMATLKVKPADIYPKVTEHISEIIAFIEKLIERGFAYKTED-GVYFEVKKFKEYGKL 154
Query: 366 WGRN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
N E++ A K++ DFALWK+AKPGEP +ES +G+GRPGWHIECSAM+S
Sbjct: 155 SNINLEDLVSGARVETSEKKKNQKDFALWKTAKPGEPKWESPFGEGRPGWHIECSAMSSK 214
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
+ G Q D+H GG DL FPHHENE AQS A+ + WVNYW+HTG
Sbjct: 215 YLGEQFDIHGGGRDLSFPHHENEIAQSSAYSGKD-WVNYWIHTG 257
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN +T+ + F N+ +K Y CGPTVYD+ H+GH V DIIRR LEH +
Sbjct: 2 LKVYNTLTRCEEEFKTLNEKEVKMYVCGPTVYDNTHLGHGRTYVSFDIIRRYLEHIGYTV 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
++VI + TDIDDKII +A ++D K +++++
Sbjct: 62 NLVI-NFTDIDDKIIKRAYEKEKDPKEISEQF 92
>gi|262165957|ref|ZP_06033694.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM223]
gi|262025673|gb|EEY44341.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM223]
Length = 372
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R + +I I + +Q L++ AY+ + V F+V + Y K
Sbjct: 8 EMYADFDALNIKRPDVEPRATAYIEEIIALVQRLIERGFAYVADNGDVMFEVGKYDEYGK 67
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ Q A KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 68 LSKQDLEQLQAGARVDVEAAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 127
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 128 SILGNHFDIHGGGSDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 171
>gi|325267558|ref|ZP_08134210.1| cysteine--tRNA ligase [Kingella denitrificans ATCC 33394]
gi|324980908|gb|EGC16568.1| cysteine--tRNA ligase [Kingella denitrificans ATCC 33394]
Length = 487
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 97/179 (54%), Gaps = 21/179 (11%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E I + + I+ L+ +AY + VY+ V F Y +L G
Sbjct: 113 EDSDALGVLRPDIEPKATEHIGQMIAMIEDLVANGKAYPAPNGDVYYAVREFAEYGQLSG 172
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + A KR P DF LWK+AKPGEP +ES WG GRPGWHIECSAM F
Sbjct: 173 KSLDDLRAGERVDVDANKRDPLDFVLWKAAKPGEPSWESPWGNGRPGWHIECSAMGGELF 232
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQ--------------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQSC H + V YWLH G +R
Sbjct: 233 GQTFDIHGGGADLQFPHHENEIAQSCGAHGGLCGHDAPHAAGKRINSHVKYWLHNGFIR 291
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 27 GYDTGIKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEH 86
G + I +YN +T+ K F+ N +++ Y CG TVYD H+GHA V D+I R L
Sbjct: 12 GRNMPITLYNTLTRQKEEFVPLNPENVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQ 71
Query: 87 YFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ + + V ++TDIDDKII +AN E + R+ +
Sbjct: 72 HGYPLTYV-RNITDIDDKIIARANENGETIGELTARFIAAM 111
>gi|444380435|ref|ZP_21179568.1| Cysteinyl-tRNA synthetase [Enterovibrio sp. AK16]
gi|443675462|gb|ELT82191.1| Cysteinyl-tRNA synthetase [Enterovibrio sp. AK16]
Length = 460
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R ++FI I + ++ L++ AY+ S+ V F+V F Y K
Sbjct: 95 EMYADFDALNMKRPDVEPRATQFIAEIIALVERLIERGFAYVASNGDVLFEVAKFDEYGK 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ + Q K+SP DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSRQDLDQLQAGARVDVEEAKKSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 215 AILGNHFDIHGGGSDLTFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +TK K F + + Y CG T+YD HIGH V D++ R L +
Sbjct: 2 LKIYNSLTKKKEEFKPIHPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYL-RFLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLI--FKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +A E ++ +R + F L+ K P +
Sbjct: 61 LKFVRNITDIDDKIIKRAAENGESCDSLTERLIGEMYADFDALNMKRPDVEPRATQFIAE 120
Query: 150 VKLDIIRRILEHYF 163
+ + ++ R++E F
Sbjct: 121 I-IALVERLIERGF 133
>gi|403525933|ref|YP_006660820.1| cysteinyl-tRNA synthetase [Arthrobacter sp. Rue61a]
gi|403228360|gb|AFR27782.1| cysteinyl-tRNA synthetase CysS [Arthrobacter sp. Rue61a]
Length = 484
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 105/178 (58%), Gaps = 13/178 (7%)
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHS--VY 353
+ +RYE E+ + E GV PT R + IP + + IQ L+D AY D S VY
Sbjct: 100 WALAYRYEQEFENAYESLGVQRPTYEPRATGHIPEMHTLIQRLIDRGHAYPALDDSGDVY 159
Query: 354 FDVDSFPHYFKLWGRNENITQHAV------KRSPFDFALWKSAKPGEPW---YESAWGKG 404
FDV S+ Y L +N + Q A KR P DFALWK K GEP +ES WG G
Sbjct: 160 FDVRSWSKYGSLTRQNIDDMQGAPDADPRGKRDPRDFALWKGFKDGEPVTAKWESPWGAG 219
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
RPGWH+ECSAM + + G + D+H GG+DL+FPHHENE AQS A + ++ N+W+H G
Sbjct: 220 RPGWHLECSAMVTKYLGPRFDIHGGGLDLRFPHHENEMAQSQAAGD--EFANFWMHNG 275
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++ Y+ + F+ Y CG TV PH+GH + D + R LE + +
Sbjct: 3 LRFYDTASAEVRDFVPLEDGKASVYYCGATVQGMPHVGHVRSAIAFDQLTRWLE-FRGLR 61
Query: 92 SIVISSVTDIDDKIINK-ANSLKEDY 116
V+ +VTDIDDKI+ K A S D+
Sbjct: 62 VTVVRNVTDIDDKILAKSAQSFGPDW 87
>gi|418289253|ref|ZP_12901614.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM233]
gi|372199990|gb|EHP14134.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NM233]
Length = 473
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 218 GDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K F + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKELFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 96
>gi|375083186|ref|ZP_09730216.1| cysteinyl-tRNA synthetase [Thermococcus litoralis DSM 5473]
gi|374742140|gb|EHR78548.1| cysteinyl-tRNA synthetase [Thermococcus litoralis DSM 5473]
Length = 474
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 102/167 (61%), Gaps = 10/167 (5%)
Query: 304 LEYF-ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHY 362
L+YF E M+ V P RV+E I I F++ L + AY GSD VYF+V + Y
Sbjct: 92 LKYFLEDMKALKVKPADIYPRVTEHIQDIIDFVKKLEEKGYAYEGSD-GVYFEVRKYQEY 150
Query: 363 FKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAM 415
KL N + V K++P DFALWK AKPGEP +ES WGKGRPGWHIECS M
Sbjct: 151 GKLSKINPEDLRKGVRVEPGEGKKNPEDFALWKKAKPGEPKWESPWGKGRPGWHIECSTM 210
Query: 416 ASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
++ + G D+H GG DL FPHHENE AQ+ A + +WV YWLHTG
Sbjct: 211 STKYLGESFDIHGGGNDLIFPHHENEIAQTEACTGK-EWVRYWLHTG 256
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 75/132 (56%), Gaps = 6/132 (4%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+K+YN ++K K F ++ Y CGPTVYD H+GHA + D+IRR LEH +
Sbjct: 1 MKVYNTMSKQKEEFKPLRDGEVRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHKGYT- 59
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAK---RYFLPLIFKILHQKVVGSIPTRGHAVC 148
+++ + TDIDDKII +AN ED K +A+ +YFL + K L K P +
Sbjct: 60 VLMVMNFTDIDDKIIRRANETGEDPKELAEKFLKYFLEDM-KALKVKPADIYPRVTEHIQ 118
Query: 149 NVKLDIIRRILE 160
++ +D ++++ E
Sbjct: 119 DI-IDFVKKLEE 129
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 22/150 (14%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLRLI 203
GHA + D+IRR LEH + +++ + TDIDDKII +AN ED K +A++ FL+
Sbjct: 38 GHARTYIAFDVIRRYLEHKGYT-VLMVMNFTDIDDKIIRRANETGEDPKELAEK-FLKYF 95
Query: 204 FKILHQKVVRKLAIDLKKAKVDSGPVLTKCDEFRDELLALGVQIKDQKCEATWQFKDGKV 263
+ D+K KV + + E +++ +K E +G
Sbjct: 96 LE------------DMKALKVKPADIYPRVTEHIQDIIDFV-----KKLEEKGYAYEG-- 136
Query: 264 FSDRVFISLPLYLILIQVSLLGPLTLRTVV 293
SD V+ + Y ++S + P LR V
Sbjct: 137 -SDGVYFEVRKYQEYGKLSKINPEDLRKGV 165
>gi|385852162|ref|YP_005898677.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M04-240196]
gi|325206985|gb|ADZ02438.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M04-240196]
Length = 473
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 218 GDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 96
>gi|433476514|ref|ZP_20433845.1| cysteine--tRNA ligase [Neisseria meningitidis 88050]
gi|433516605|ref|ZP_20473363.1| cysteine--tRNA ligase [Neisseria meningitidis 2004090]
gi|433518715|ref|ZP_20475449.1| cysteine--tRNA ligase [Neisseria meningitidis 96023]
gi|433524927|ref|ZP_20481579.1| cysteine--tRNA ligase [Neisseria meningitidis 97020]
gi|433529189|ref|ZP_20485794.1| cysteine--tRNA ligase [Neisseria meningitidis NM3652]
gi|433531364|ref|ZP_20487941.1| cysteine--tRNA ligase [Neisseria meningitidis NM3642]
gi|433533398|ref|ZP_20489954.1| cysteine--tRNA ligase [Neisseria meningitidis 2007056]
gi|433535558|ref|ZP_20492083.1| cysteine--tRNA ligase [Neisseria meningitidis 2001212]
gi|432207372|gb|ELK63362.1| cysteine--tRNA ligase [Neisseria meningitidis 88050]
gi|432250791|gb|ELL06171.1| cysteine--tRNA ligase [Neisseria meningitidis 2004090]
gi|432250876|gb|ELL06253.1| cysteine--tRNA ligase [Neisseria meningitidis 96023]
gi|432257429|gb|ELL12729.1| cysteine--tRNA ligase [Neisseria meningitidis 97020]
gi|432263543|gb|ELL18760.1| cysteine--tRNA ligase [Neisseria meningitidis NM3652]
gi|432263814|gb|ELL19025.1| cysteine--tRNA ligase [Neisseria meningitidis NM3642]
gi|432264712|gb|ELL19911.1| cysteine--tRNA ligase [Neisseria meningitidis 2007056]
gi|432269148|gb|ELL24311.1| cysteine--tRNA ligase [Neisseria meningitidis 2001212]
Length = 473
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 218 GDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGKLTARFIQAM 96
>gi|289548117|ref|YP_003473105.1| cysteinyl-tRNA synthetase [Thermocrinis albus DSM 14484]
gi|289181734|gb|ADC88978.1| cysteinyl-tRNA synthetase [Thermocrinis albus DSM 14484]
Length = 490
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 95/169 (56%), Gaps = 9/169 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY Y+ ME GV P RV+E I I IQ L+D AY+ S VYF V +FP
Sbjct: 92 RYIASYYRDMEAIGVRPADVEPRVTEHIQEIIQLIQGLIDKGYAYV-SGGDVYFSVKAFP 150
Query: 361 HYFKLWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL RN + KR P DFALWK+AK GEP ++S WG GRPGWH EC
Sbjct: 151 EYGKLSRRNPEELEAGARVEPSEKKRDPLDFALWKAAKAGEPAWDSPWGPGRPGWHTECV 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM G +D+H GG+DL FPHHENE AQ+ A + + YW+H G
Sbjct: 211 AMIFKHLGTTIDIHGGGLDLVFPHHENEIAQAEALTGRP-FARYWVHNG 258
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+++YN +T F+ N + Y CG TVYD H+GH + D++RR LE Y
Sbjct: 3 LRLYNTLTGRVEEFVPLNPPQVLIYTCGVTVYDDSHVGHGRSLIVFDVLRRYLE-YLGYR 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 124
+ + TD+DDKIINKA + TVA RY
Sbjct: 62 VKFVRNFTDVDDKIINKAREECTHFMTVANRYI 94
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 144 GHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYF 199
GH + D++RR LE Y + + TD+DDKIINKA + TVA RY
Sbjct: 40 GHGRSLIVFDVLRRYLE-YLGYRVKFVRNFTDVDDKIINKAREECTHFMTVANRYI 94
>gi|445414926|ref|ZP_21434004.1| cysteine--tRNA ligase [Acinetobacter sp. WC-743]
gi|444764053|gb|ELW88381.1| cysteine--tRNA ligase [Acinetobacter sp. WC-743]
Length = 473
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 102/173 (58%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E E G L P A R +++I +Q+ I L++ AY ++ VYF+V+ F Y +L G
Sbjct: 100 EDAENLGCLHPDEAPRATDYIDQMQNMIGHLVNKGAAYPSANGDVYFEVEKFAKYGRLSG 159
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R +E + K+ PFDF LWK AK EP + S WG GRPGWHIECSAM++
Sbjct: 160 RKLDDMQAGASERVDVDVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A ++ Q+VNYW+H G + DG +
Sbjct: 220 CLGNHFDIHGGGSDLLFPHHENEIAQSEASTDE-QYVNYWMHVGFI-NVDGEK 270
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ + + H+ Y CG TVYD HIGHA V D IIR + +++
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVK- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TDIDDKII +AN E + R+ +
Sbjct: 65 -YVRNITDIDDKIIARANENGESITALTDRFIQAM 98
>gi|421539054|ref|ZP_15985225.1| cysteine--tRNA ligase [Neisseria meningitidis 93003]
gi|402315166|gb|EJU50732.1| cysteine--tRNA ligase [Neisseria meningitidis 93003]
Length = 473
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 103/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCA-------------FHNQS--QWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS H QS V YWLH G +R
Sbjct: 218 GNTFDIHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGKLTARFIQAM 96
>gi|373454259|ref|ZP_09546131.1| cysteine-tRNA ligase [Dialister succinatiphilus YIT 11850]
gi|371935992|gb|EHO63729.1| cysteine-tRNA ligase [Dialister succinatiphilus YIT 11850]
Length = 481
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 103/172 (59%), Gaps = 11/172 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYI-GSDHSVYFDVDSF 359
RY YF+ M+ V RVSE + I ++TL+ AY+ G D VY+D+ +F
Sbjct: 93 RYIDAYFQVMDALHVRRADVYPRVSEHMDDIIHMVETLIQKGHAYVLGGD--VYYDISTF 150
Query: 360 PHYFKLWGR-------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIEC 412
Y +L GR I + KR+P DFALWK+AKPGEP++ES WGKGRPGWHIEC
Sbjct: 151 KDYGRLSGRKIEDMLAGARIEVNDEKRNPGDFALWKAAKPGEPFWESPWGKGRPGWHIEC 210
Query: 413 SAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
SAM+ H+ G D H GG DL FPHHENE AQS +V+YWLH G +
Sbjct: 211 SAMSIHYLGKTFDFHGGGSDLIFPHHENEIAQSEGC-TGCHFVDYWLHNGFI 261
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
IK+YN +TK K F K Y CG T Y+ PHIG+A V D+IRR LE Y
Sbjct: 4 IKVYNTLTKEKEVFKPITPGEAKIYVCGVTPYNHPHIGNARPAVTWDVIRRYLE-YVGYK 62
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKIL 132
+ + TD+DDKIINKAN+ D+KT++ RY + F+++
Sbjct: 63 VEFVQNFTDVDDKIINKANAEGTDWKTISDRY-IDAYFQVM 102
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 141 PTRGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFL 200
P G+A V D+IRR LE Y + + TD+DDKIINKAN+ D+KT++ RY +
Sbjct: 38 PHIGNARPAVTWDVIRRYLE-YVGYKVEFVQNFTDVDDKIINKANAEGTDWKTISDRY-I 95
Query: 201 RLIFKILHQKVVRKLAI 217
F+++ VR+ +
Sbjct: 96 DAYFQVMDALHVRRADV 112
>gi|445492789|ref|ZP_21460635.1| cysteine--tRNA ligase [Acinetobacter baumannii AA-014]
gi|444762993|gb|ELW87339.1| cysteine--tRNA ligase [Acinetobacter baumannii AA-014]
Length = 473
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 99/173 (57%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E G L P A + +E+I +Q+ I L++ AY S+ VYF+V F Y +L G
Sbjct: 100 EDAANLGCLAPDEAPKATEYIEQMQNMIGNLVNKGSAYPASNGDVYFEVTKFEKYGRLSG 159
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R +E + K+ PFDF LWK AK EP + S WG GRPGWHIECSAM++
Sbjct: 160 RKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A + Q+VNYW+H G + DG +
Sbjct: 220 CLGNHFDIHGGGSDLMFPHHENEIAQSEASTGE-QYVNYWMHVGFI-NVDGEK 270
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ + + H+ Y CG TVYD HIGHA V D IIR + + +
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVR- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I ++TDIDDKII +AN E + + R+
Sbjct: 65 -YIRNITDIDDKIIKRANENGETIQQLTTRF 94
>gi|421545409|ref|ZP_15991472.1| cysteine--tRNA ligase [Neisseria meningitidis NM140]
gi|421547458|ref|ZP_15993493.1| cysteine--tRNA ligase [Neisseria meningitidis NM183]
gi|421549491|ref|ZP_15995504.1| cysteine--tRNA ligase [Neisseria meningitidis NM2781]
gi|421551603|ref|ZP_15997590.1| cysteine--tRNA ligase [Neisseria meningitidis 69166]
gi|421553643|ref|ZP_15999602.1| cysteine--tRNA ligase [Neisseria meningitidis NM576]
gi|421567919|ref|ZP_16013650.1| cysteine--tRNA ligase [Neisseria meningitidis NM3001]
gi|433472311|ref|ZP_20429687.1| cysteine--tRNA ligase [Neisseria meningitidis 68094]
gi|433478638|ref|ZP_20435944.1| cysteine--tRNA ligase [Neisseria meningitidis 70012]
gi|433527099|ref|ZP_20483716.1| cysteine--tRNA ligase [Neisseria meningitidis 69096]
gi|433539845|ref|ZP_20496309.1| cysteine--tRNA ligase [Neisseria meningitidis 70030]
gi|402320768|gb|EJU56249.1| cysteine--tRNA ligase [Neisseria meningitidis NM183]
gi|402320956|gb|EJU56436.1| cysteine--tRNA ligase [Neisseria meningitidis NM140]
gi|402323198|gb|EJU58644.1| cysteine--tRNA ligase [Neisseria meningitidis NM2781]
gi|402326610|gb|EJU62009.1| cysteine--tRNA ligase [Neisseria meningitidis 69166]
gi|402327463|gb|EJU62851.1| cysteine--tRNA ligase [Neisseria meningitidis NM576]
gi|402342864|gb|EJU78020.1| cysteine--tRNA ligase [Neisseria meningitidis NM3001]
gi|432206264|gb|ELK62273.1| cysteine--tRNA ligase [Neisseria meningitidis 68094]
gi|432212918|gb|ELK68849.1| cysteine--tRNA ligase [Neisseria meningitidis 70012]
gi|432257916|gb|ELL13208.1| cysteine--tRNA ligase [Neisseria meningitidis 69096]
gi|432270890|gb|ELL26023.1| cysteine--tRNA ligase [Neisseria meningitidis 70030]
Length = 473
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 218 GDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGKLTARFIQAM 96
>gi|163801179|ref|ZP_02195079.1| cysteinyl-tRNA synthetase [Vibrio sp. AND4]
gi|159175528|gb|EDP60325.1| cysteinyl-tRNA synthetase [Vibrio sp. AND4]
Length = 460
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 93/152 (61%), Gaps = 8/152 (5%)
Query: 318 PTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWGRNENITQ--- 374
P R ++FI I ++ L++ AY+ + V F+V F Y KL ++ + Q
Sbjct: 108 PDVEPRATQFIAEIIELVEKLIERGFAYVADNGDVMFEVRQFKEYGKLSKQDLDQLQAGA 167
Query: 375 ----HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGG 430
KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S G D+H GG
Sbjct: 168 RVDIETAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGG 227
Query: 431 IDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 228 SDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYF--LPLIFKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +A E ++ R + + F L+ K P +
Sbjct: 61 LTFVRNITDIDDKIIKRAAENGESCDSLTDRLIGEMHVDFDSLNMKRPDVEPRATQFIAE 120
Query: 150 VKLDIIRRILEHYF 163
+ ++++ +++E F
Sbjct: 121 I-IELVEKLIERGF 133
>gi|421566414|ref|ZP_16012164.1| cysteine--tRNA ligase [Neisseria meningitidis NM3081]
gi|402340327|gb|EJU75529.1| cysteine--tRNA ligase [Neisseria meningitidis NM3081]
Length = 473
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 103/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCA-------------FHNQS--QWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS H QS V YWLH G +R
Sbjct: 218 GNTFDIHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGKLTARFIQAM 96
>gi|260913075|ref|ZP_05919557.1| cysteine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
gi|260632662|gb|EEX50831.1| cysteine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
Length = 467
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 99/171 (57%), Gaps = 8/171 (4%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R E ++ + VL P R + I I + ++ L+ AY+ S+ V F+V+SF
Sbjct: 91 RMVAEMYKDFDMLNVLRPDVEPRATHHIAEIITLVEKLIQRGHAYVSSNGDVMFNVESFK 150
Query: 361 HYFKLWGRNENITQHA-------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL +N Q +K++P DF LWK +KP EP ++S WG GRPGWHIECS
Sbjct: 151 EYGKLSRQNLEQLQAGARVEIVHIKKNPMDFVLWKMSKPEEPSWDSPWGPGRPGWHIECS 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHL 464
AM G D+H GG DL FPHHENE AQSC H +Q+VNYW+H+G +
Sbjct: 211 AMNYKVLGEHFDIHGGGSDLMFPHHENEIAQSCCAHG-NQYVNYWMHSGMI 260
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + N + Y CG TVYD H+GH V D+I R L Y
Sbjct: 2 LKIYNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TD+DDKII +A +E + R
Sbjct: 61 LTYVRNITDVDDKIIKRALKNRESCDQLVDR 91
>gi|358012794|ref|ZP_09144604.1| cysteinyl-tRNA synthetase [Acinetobacter sp. P8-3-8]
Length = 473
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 104/180 (57%), Gaps = 11/180 (6%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ + + + G L P A R +++I +Q+ I L++ AY + VYF+V+ F
Sbjct: 93 RFIIAMNDDAARLGCLEPDEAPRATDYIDQMQNMIGNLVNKGTAYPSENGDVYFEVEKFA 152
Query: 361 HYFKLWGR---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIE 411
Y +L GR +E + K+ PFDF LWK AK EP + S WG GRPGWHIE
Sbjct: 153 KYGRLSGRKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIE 212
Query: 412 CSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
CSAM++ G D+H GG DL FPHHENE AQS A ++ Q+VNYW+H G + DG +
Sbjct: 213 CSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTDE-QYVNYWMHVGFI-NVDGEK 270
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ + + H+ Y CG TVYD HIGHA V D IIR + +++
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWNVK- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ ++TDIDDKII +AN E + +R+ + +
Sbjct: 65 -YVRNITDIDDKIIARANENGESISALTERFIIAM 98
>gi|119960845|ref|YP_946695.1| cysteinyl-tRNA synthetase [Arthrobacter aurescens TC1]
gi|166200128|sp|A1R383.1|SYC_ARTAT RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|119947704|gb|ABM06615.1| cysteinyl-tRNA synthetase [Arthrobacter aurescens TC1]
Length = 484
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 105/178 (58%), Gaps = 13/178 (7%)
Query: 296 FLFNFRYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHS--VY 353
+ +RYE E+ + E GV PT R + IP + + IQ L+D AY D S VY
Sbjct: 100 WALAYRYEQEFENAYESLGVQRPTYEPRATGHIPEMHTLIQRLIDRGHAYPALDDSGDVY 159
Query: 354 FDVDSFPHYFKLWGRNENITQHAV------KRSPFDFALWKSAKPGEPW---YESAWGKG 404
FDV S+ Y L +N + Q A KR P DFALWK K GEP +ES WG G
Sbjct: 160 FDVRSWSKYGSLTRQNIDDMQGAPDADPRGKRDPRDFALWKGFKDGEPVTAKWESPWGAG 219
Query: 405 RPGWHIECSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
RPGWH+ECSAM + + G + D+H GG+DL+FPHHENE AQS A + ++ N+W+H G
Sbjct: 220 RPGWHLECSAMVTKYLGPRFDIHGGGLDLRFPHHENEMAQSQAAGD--EFANFWMHNG 275
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++ Y+ + F+ Y CG TV PH+GH + D + R LE + +
Sbjct: 3 LRFYDTASAEVRDFVPLEDGKASVYYCGATVQGMPHVGHVRSAIAFDQLTRWLE-FRGLR 61
Query: 92 SIVISSVTDIDDKIINK-ANSLKEDY 116
V+ +VTDIDDKI+ K A S D+
Sbjct: 62 VTVVRNVTDIDDKILAKSAQSFGPDW 87
>gi|334705447|ref|ZP_08521313.1| cysteinyl-tRNA synthetase [Aeromonas caviae Ae398]
Length = 458
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 99/162 (61%), Gaps = 8/162 (4%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
+ + G++ P R ++ I I + ++TLL+ AY+ + V F V+S+ Y KL G
Sbjct: 98 QDFDALGMVRPDIEPRATQHIGEIIALVETLLEKGHAYVADNGDVMFIVESYADYGKLSG 157
Query: 368 RN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + A KR+P DF LWK +KPGEP ++S WG GRPGWHIECSAM S
Sbjct: 158 QDLEQLQAGARVDVVDAKRNPLDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHL 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H +VN W+H+G
Sbjct: 218 GNHFDIHGGGSDLQFPHHENEIAQSCCAHG-GDYVNTWMHSG 258
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 14/138 (10%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYL-RYAGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLIFKILHQKVVGSIPTRGHAVCNVK 151
+ +VTD+DDKII +A E + T L ++++G + A+ V+
Sbjct: 61 LTYVRNVTDVDDKIIKRA---AETHVTCDD----------LTERLIGDMHQDFDALGMVR 107
Query: 152 LDIIRRILEHYFHIHSIV 169
DI R +H I ++V
Sbjct: 108 PDIEPRATQHIGEIIALV 125
>gi|319638892|ref|ZP_07993650.1| cysteinyl-tRNA synthetase [Neisseria mucosa C102]
gi|317399796|gb|EFV80459.1| cysteinyl-tRNA synthetase [Neisseria mucosa C102]
Length = 473
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 103/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCA-------------FHNQS--QWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS H QS V YWLH G +R
Sbjct: 218 GDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFSPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGDLTARFIQAM 96
>gi|108804992|ref|YP_644929.1| cysteinyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
gi|123068971|sp|Q1AU11.1|SYC_RUBXD RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|108766235|gb|ABG05117.1| cysteinyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
Length = 470
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 108/199 (54%), Gaps = 7/199 (3%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
RY + E + G+ P R +E IP + S I+ L+ AY + VY+ V++FP
Sbjct: 90 RYTDSFHERLRLLGIGMPDVEPRATEHIPEMISLIEELIRRGHAYPAPNGDVYYAVETFP 149
Query: 361 HYFKLWG-RNENIT-----QHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSA 414
Y L R E + Q KR+P DF LWK++KPGEP +ES WG GRPGWHIECSA
Sbjct: 150 RYGALSKQRPEEMKITEKGQTGHKRNPLDFTLWKASKPGEPSWESPWGPGRPGWHIECSA 209
Query: 415 MASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTRRLR 474
M G D+H GG D++FPHHENE AQSC H +V W H G +R + +
Sbjct: 210 MVEKHLPGGADIHGGGSDIRFPHHENELAQSCGAHPDRPFVRAWAHHGMVR-MAAQKMAK 268
Query: 475 AARFITNLSGSTIGYTRDT 493
+ + + +T+ + RD
Sbjct: 269 SVGNVVDAREATLKHGRDA 287
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 56 YACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSIVISSVTDIDDKIINKANSLKED 115
Y CGPTVY+ HIG+ ++ D+ R L + V + +TDIDDKIIN+AN
Sbjct: 25 YVCGPTVYNHIHIGNVRGHLFWDVAVRFLRSRGYRVKFVWN-ITDIDDKIINRANEEGVS 83
Query: 116 YKTVAKRY 123
+K + +RY
Sbjct: 84 WKEIVRRY 91
>gi|114768989|ref|ZP_01446615.1| cysteinyl-tRNA synthetase [Rhodobacterales bacterium HTCC2255]
gi|114549906|gb|EAU52787.1| cysteinyl-tRNA synthetase [Rhodobacterales bacterium HTCC2255]
Length = 455
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 94/167 (56%), Gaps = 8/167 (4%)
Query: 306 YFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKL 365
Y E M G L P A R +E+I + L+ AY+ H V FDV S+ Y +L
Sbjct: 99 YIEDMTALGALEPDYAPRATEYISEMIEMSSELIKKGHAYVAEGH-VLFDVSSYEAYGEL 157
Query: 366 WGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
GR+ + KR+P DF LWK + +P +ES WG GRPGWHIECSAMA
Sbjct: 158 SGRSIDDMIAGARVEVAPYKRNPMDFVLWKPSNNDQPGWESPWGFGRPGWHIECSAMARA 217
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLR 465
FG + D+H GG+DL+FPHHENE AQSCA Q + N WLH L+
Sbjct: 218 LFGEKFDIHGGGLDLQFPHHENEIAQSCACCGQDSFANVWLHNEMLQ 264
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
IK+YN +TK F ++ +++ Y CGPTVYD HIG+A V DI+ R+L H + I+
Sbjct: 3 IKLYNVKNRTKEAFKPIDERNVRMYVCGPTVYDRAHIGNARPVVVFDILYRLLRHTYGIN 62
Query: 92 SIVIS-SVTDIDDKIINKA 109
S+ + + TD+DDKI KA
Sbjct: 63 SVSYARNFTDVDDKINIKA 81
>gi|120554762|ref|YP_959113.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
gi|187629847|sp|A1U1Q7.1|SYC_MARAV RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|120324611|gb|ABM18926.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
Length = 463
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 100/166 (60%), Gaps = 10/166 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E K GVL P R + FI I + IQ L+ AY + VYF V+SFP Y KL
Sbjct: 97 EDEAKLGVLSPNEEPRATAFIDDIIAMIQKLIAGGHAYAADNGDVYFAVESFPDYGKLSK 156
Query: 368 RN-ENITQHA------VKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
+ E++ A KRSP DFALWK+AKPGE ++S WG+GRPGWHIECSAM++
Sbjct: 157 KKLEDLVAGARVDVQEAKRSPADFALWKAAKPGEVSWQSPWGEGRPGWHIECSAMSTKCL 216
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-CAFHNQSQWVNYWLHTGHLR 465
G D+H GG DL FPHHENE AQS CA +V+ W+H G +R
Sbjct: 217 GDTFDIHGGGPDLLFPHHENEIAQSECA--TGHTFVHTWMHAGAIR 260
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHY-FHI 90
++IYN +T+ K F ++ Y CG TVYD H+GHA V D++ R L H + +
Sbjct: 1 MRIYNTLTQQKEAFKTLEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVVTRYLRHRGYDV 60
Query: 91 HSIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
H + ++TDIDDKI+ +A+ E Y + R +
Sbjct: 61 H--YVRNITDIDDKILRRADENGEVYTDLTDRMIRAM 95
>gi|421564183|ref|ZP_16009991.1| cysteine--tRNA ligase [Neisseria meningitidis NM2795]
gi|402338983|gb|EJU74206.1| cysteine--tRNA ligase [Neisseria meningitidis NM2795]
Length = 473
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 218 GDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 96
>gi|225848506|ref|YP_002728669.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644318|gb|ACN99368.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 487
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 97/169 (57%), Gaps = 9/169 (5%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
+Y EYF+ EKF + P RV+ IP I FIQ L+D AY D VYF V F
Sbjct: 92 KYIKEYFDDAEKFRIEPADIEPRVTTHIPDIIKFIQELIDKGYAY-EVDGDVYFSVRKFK 150
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y KL R+ I K+ P DFALWKSAK GEP++ES WGKGRPGWH EC
Sbjct: 151 DYGKLSKRSIDELLAGARIEPGEKKKDPLDFALWKSAKAGEPYWESPWGKGRPGWHTECC 210
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
AM G +D+H GG+DL FPHHENE AQ+ + + + YW+H G
Sbjct: 211 AMIFKHLGETIDIHGGGLDLTFPHHENEIAQAESLTGKP-FARYWIHNG 258
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T K F +K Y CG TVYD H+GH + D+IRR L Y +
Sbjct: 3 LKIYNTLTGKKEDFAPIKPPQVKIYTCGVTVYDYNHVGHGRSLIVFDMIRRYL-RYLGYN 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I + + TD+DDKIIN+A + + ++ +Y
Sbjct: 62 VIFVRNFTDVDDKIINRAKNECVPFTVISDKY 93
>gi|15677904|ref|NP_275072.1| cysteinyl-tRNA synthetase [Neisseria meningitidis MC58]
gi|385854125|ref|YP_005900639.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|416198682|ref|ZP_11619049.1| cysteinyl-tRNA synthetase [Neisseria meningitidis CU385]
gi|433466065|ref|ZP_20423533.1| cysteine--tRNA ligase [Neisseria meningitidis NM422]
gi|433491440|ref|ZP_20448549.1| cysteine--tRNA ligase [Neisseria meningitidis NM418]
gi|433505933|ref|ZP_20462861.1| cysteine--tRNA ligase [Neisseria meningitidis 9506]
gi|433508075|ref|ZP_20464969.1| cysteine--tRNA ligase [Neisseria meningitidis 9757]
gi|433510233|ref|ZP_20467087.1| cysteine--tRNA ligase [Neisseria meningitidis 12888]
gi|433512288|ref|ZP_20469096.1| cysteine--tRNA ligase [Neisseria meningitidis 4119]
gi|30316184|sp|Q9JXE6.1|SYC_NEIMB RecName: Full=Cysteine--tRNA ligase; AltName: Full=Cysteinyl-tRNA
synthetase; Short=CysRS
gi|7227346|gb|AAF42401.1| cysteinyl-tRNA synthetase [Neisseria meningitidis MC58]
gi|325139404|gb|EGC61944.1| cysteinyl-tRNA synthetase [Neisseria meningitidis CU385]
gi|325201129|gb|ADY96584.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
gi|432200267|gb|ELK56364.1| cysteine--tRNA ligase [Neisseria meningitidis NM422]
gi|432225192|gb|ELK80945.1| cysteine--tRNA ligase [Neisseria meningitidis NM418]
gi|432238457|gb|ELK94023.1| cysteine--tRNA ligase [Neisseria meningitidis 9506]
gi|432238657|gb|ELK94222.1| cysteine--tRNA ligase [Neisseria meningitidis 9757]
gi|432244477|gb|ELK99965.1| cysteine--tRNA ligase [Neisseria meningitidis 12888]
gi|432244649|gb|ELL00134.1| cysteine--tRNA ligase [Neisseria meningitidis 4119]
Length = 473
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 218 GDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGKLTARFIQAM 96
>gi|358446343|ref|ZP_09156890.1| cysteine--tRNA ligase [Corynebacterium casei UCMA 3821]
gi|356607755|emb|CCE55214.1| cysteine--tRNA ligase [Corynebacterium casei UCMA 3821]
Length = 462
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 110/170 (64%), Gaps = 13/170 (7%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E+ ++ E GVLPP+ R + F+ + ++Q L+D AY S+ SVYFDV ++ +
Sbjct: 93 YEREFTKAYETLGVLPPSVEPRATGFVTQMVDYMQRLMDRGFAY-ASEGSVYFDVAAWVN 151
Query: 362 -----YFKLWG-RNENITQHAV----KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIE 411
Y L G R E++ Q KRSP DFALWK+AKPGEP + + WG GRPGWH+E
Sbjct: 152 SEGSDYGSLSGNRVEDMEQGETDVTGKRSPQDFALWKAAKPGEPSWPTPWGDGRPGWHLE 211
Query: 412 CSAMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHT 461
CSAM++++ G D+H GG+DL+FPHHENE AQS A + + N+W+H
Sbjct: 212 CSAMSTYYLGESFDIHGGGLDLQFPHHENEIAQSHAAGD--GFANFWMHN 259
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
++I++ T++ F + Y CG T PHIGH V DI+RR L +
Sbjct: 3 LRIFDTATRSLRDFEPIKPGYASIYLCGATPQAKPHIGHLRSGVAFDIVRRWLSE-LGLD 61
Query: 92 SIVISSVTDIDDKIINKA 109
+ +VTDIDDKI+ KA
Sbjct: 62 VAFVRNVTDIDDKILTKA 79
>gi|262276150|ref|ZP_06053959.1| cysteinyl-tRNA synthetase [Grimontia hollisae CIP 101886]
gi|262219958|gb|EEY71274.1| cysteinyl-tRNA synthetase [Grimontia hollisae CIP 101886]
Length = 461
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 97/165 (58%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R +++I I + ++ L+D AY+ S+ V F+V F Y K
Sbjct: 95 EMYADFDALNMKRPDIEPRATQYIAEIIALVERLIDRGFAYVASNGDVLFEVAKFDEYGK 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ Q K+SP DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSRQDLEQLQAGARVDVEEAKKSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 215 AILGNHFDIHGGGSDLTFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +TK K F + + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNSLTKQKEEFKPIHPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLI--FKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +A E + + +R + F L+ K P +
Sbjct: 61 LTFVRNITDIDDKIIKRAAENGESCEALTERLIGEMYADFDALNMKRPDIEPRATQYIAE 120
Query: 150 VKLDIIRRILEHYF 163
+ + ++ R+++ F
Sbjct: 121 I-IALVERLIDRGF 133
>gi|225077094|ref|ZP_03720293.1| hypothetical protein NEIFLAOT_02147 [Neisseria flavescens
NRL30031/H210]
gi|224951651|gb|EEG32860.1| hypothetical protein NEIFLAOT_02147 [Neisseria flavescens
NRL30031/H210]
Length = 473
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 103/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCA-------------FHNQS--QWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS H QS V YWLH G +R
Sbjct: 218 GDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K F + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKESFSPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 96
>gi|195374027|ref|XP_002046047.1| GM15123 [Drosophila sechellia]
gi|194123235|gb|EDW45278.1| GM15123 [Drosophila sechellia]
Length = 256
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/147 (53%), Positives = 100/147 (68%), Gaps = 21/147 (14%)
Query: 338 LLDTKQAYIGSDHSVYFDVDSFP-----HYFKL----WGRNENITQH-----------AV 377
++D AY +++SVYFDV+ F HY KL +G +++ + +
Sbjct: 1 IIDNGLAY-AANNSVYFDVNGFDKREKHHYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSE 59
Query: 378 KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFFGGQVDLHTGGIDLKFPH 437
KRS DFALWK++K GEPW++S WGKGRPGWHIECSAMAS FG D+HTGG+DLKFPH
Sbjct: 60 KRSANDFALWKASKAGEPWWDSPWGKGRPGWHIECSAMASDIFGSTFDIHTGGVDLKFPH 119
Query: 438 HENEEAQSCAFHNQSQWVNYWLHTGHL 464
H+NE AQS A N+S+WV Y+LHTGHL
Sbjct: 120 HDNELAQSEAAFNESEWVKYFLHTGHL 146
>gi|254804107|ref|YP_003082328.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha14]
gi|254667649|emb|CBA03462.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha14]
Length = 475
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 103/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 100 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 159
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 160 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 219
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCA-------------FHNQS--QWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS H QS V YWLH G +R
Sbjct: 220 GDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIR 279
Query: 466 GTDGTR 471
DG +
Sbjct: 280 -VDGEK 284
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 6 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 65
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 66 V-RNITDIDDKIIARAAENGETIGKLTARFIQAM 98
>gi|417568294|ref|ZP_12219157.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC189]
gi|417578880|ref|ZP_12229713.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-17]
gi|395554589|gb|EJG20591.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC189]
gi|395568018|gb|EJG28692.1| cysteine--tRNA ligase [Acinetobacter baumannii Naval-17]
Length = 477
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 99/173 (57%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E G L P A + +E+I +Q+ I L++ AY S+ VYF+V F Y +L G
Sbjct: 104 EDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSG 163
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R +E + K+ PFDF LWK AK EP + S WG GRPGWHIECSAM++
Sbjct: 164 RKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTC 223
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A + Q+VNYW+H G + DG +
Sbjct: 224 CLGNHFDIHGGGSDLMFPHHENEIAQSEASTGE-QYVNYWMHVGFI-NVDGEK 274
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ + + H+ Y CG TVYD HIGHA V D IIR + + +
Sbjct: 10 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVR- 68
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I ++TDIDDKII +AN E + + R+
Sbjct: 69 -YIRNITDIDDKIIKRANENGETIQQLTTRF 98
>gi|329117979|ref|ZP_08246692.1| cysteine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
gi|327465867|gb|EGF12139.1| cysteine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
Length = 494
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 105/193 (54%), Gaps = 23/193 (11%)
Query: 301 RYELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFP 360
R+ E + GVL P + +E IP + + I++L+ +AY ++ VY+ V FP
Sbjct: 112 RFIAAMHEDADALGVLRPDLEPKATENIPQMIAMIESLIQKGKAYPAANGDVYYAVREFP 171
Query: 361 HYFKLWGRN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECS 413
Y +L G++ E + KR P DF LWK+AK GEP +ES WG+GRPGWHIECS
Sbjct: 172 AYGQLSGKSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGQGRPGWHIECS 231
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQ---------------SQWVNYW 458
AM+ + FG D+H GG DL+FPHHENE AQS + V YW
Sbjct: 232 AMSENLFGDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGHDHTLTHHGKPVASHVKYW 291
Query: 459 LHTGHLRGTDGTR 471
LH G +R DG +
Sbjct: 292 LHNGFIR-VDGEK 303
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ +YN +T+ K F + +++ Y CG TVYD H+GHA V D+I R L +
Sbjct: 23 LNLYNTLTRQKEAFSPIDPANVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPL 82
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
+ V ++TDIDDKII +A E + R+ +
Sbjct: 83 TYV-RNITDIDDKIIARAAENGETIGELTARFIAAM 117
>gi|90580099|ref|ZP_01235907.1| cysteinyl-tRNA synthetase [Photobacterium angustum S14]
gi|90438984|gb|EAS64167.1| cysteinyl-tRNA synthetase [Photobacterium angustum S14]
Length = 460
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + G+ P R ++FI I + + L++ AY+ S+ V F+V + Y +
Sbjct: 95 EMHADFDALGMKRPDVEPRATQFIAEIIALCERLIERGFAYVASNGDVMFEVSKYEDYGR 154
Query: 365 LWGRNENITQHAV-------KRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ + Q KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSKQDLDQLQAGARVDIDMAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 215 AILGDHFDIHGGGSDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNSLTRQKEAFTPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYL-RYSGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKR 122
+ ++TDIDDKII +A E ++ +R
Sbjct: 61 LTFVRNITDIDDKIIKRAAENGESCDSLTER 91
>gi|421624016|ref|ZP_16064894.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC098]
gi|408702528|gb|EKL47938.1| cysteine--tRNA ligase [Acinetobacter baumannii OIFC098]
Length = 473
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 99/173 (57%), Gaps = 11/173 (6%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E G L P A + +E+I +Q+ I L++ AY S+ VYF+V F Y +L G
Sbjct: 100 EDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSG 159
Query: 368 R---------NENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASH 418
R +E + K+ PFDF LWK AK EP + S WG GRPGWHIECSAM++
Sbjct: 160 RKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTC 219
Query: 419 FFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTGHLRGTDGTR 471
G D+H GG DL FPHHENE AQS A + Q+VNYW+H G + DG +
Sbjct: 220 CLGNHFDIHGGGSDLMFPHHENEIAQSEASTGE-QYVNYWMHVGFI-NVDGEK 270
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLD-IIRRILEHYFHIHS 92
+YN + KV F+ + + H+ Y CG TVYD HIGHA V D IIR + + +
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVR- 64
Query: 93 IVISSVTDIDDKIINKANSLKEDYKTVAKRY 123
I ++TDIDDKII +AN E + + R+
Sbjct: 65 -YIRNITDIDDKIIKRANENDETIQQLTTRF 94
>gi|340363807|ref|ZP_08686122.1| cysteine--tRNA ligase [Neisseria macacae ATCC 33926]
gi|339884918|gb|EGQ74673.1| cysteine--tRNA ligase [Neisseria macacae ATCC 33926]
Length = 473
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 103/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCA-------------FHNQS--QWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS H QS V YWLH G +R
Sbjct: 218 GDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L Y + +
Sbjct: 4 IYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREYGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 96
>gi|297572189|ref|YP_003697963.1| cysteinyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
gi|296932536|gb|ADH93344.1| cysteinyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
Length = 475
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 103/169 (60%), Gaps = 12/169 (7%)
Query: 302 YELEYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPH 361
YE E+ ++ + GVL PT R + +P + +FI L++ AY G +VYFDV S
Sbjct: 93 YENEFTQAYDALGVLRPTYEPRATGHVPEMIAFIARLIERGHAYPGDSGNVYFDVASLAD 152
Query: 362 YFKLWGR-----NENITQHAVKRSPFDFALWKSAKPGEPW---YESAWGKGRPGWHIECS 413
Y L + N++ KR+P DFALWK+AKPGEP +++ WG+GRPGWH+ECS
Sbjct: 153 YGSLTRQTLDDFNDDAAVEPDKRNPRDFALWKAAKPGEPASASWDTPWGRGRPGWHLECS 212
Query: 414 AMASHFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQS-QWVNYWLHT 461
AMA + G D+H GGIDL+FPHHENE+AQS H + YW+H
Sbjct: 213 AMAGKYLGESFDIHGGGIDLRFPHHENEQAQS---HGAGYGFAQYWMHN 258
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+ IY+ T+ F + Y CG TV SPHIGH V D++ R L +
Sbjct: 3 LHIYDSATRAMREFTSLVPGKVGIYLCGATVQGSPHIGHMRSAVAFDVLVRWLRRSGY-E 61
Query: 92 SIVISSVTDIDDKIINKANSLKEDY 116
+ ++ +VTDIDDKI+ K+ ++
Sbjct: 62 TTMVRNVTDIDDKILAKSADAGREF 86
>gi|153824225|ref|ZP_01976892.1| cysteinyl-tRNA synthetase, partial [Vibrio cholerae B33]
gi|126518251|gb|EAZ75476.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
Length = 263
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 98/165 (59%), Gaps = 8/165 (4%)
Query: 305 EYFESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFK 364
E + + + P R + +I I + ++ L++ AY+ + V F+V + Y K
Sbjct: 95 EMYADFDALNIKRPDVEPRATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGK 154
Query: 365 LWGRNENITQ-------HAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMAS 417
L ++ + Q A KRSP DF LWK +KPGEP +ES WG GRPGWHIECSAM S
Sbjct: 155 LSKQDLDQLQAGARVDIEAAKRSPLDFVLWKMSKPGEPTWESPWGSGRPGWHIECSAMNS 214
Query: 418 HFFGGQVDLHTGGIDLKFPHHENEEAQSCAFHNQSQWVNYWLHTG 462
G D+H GG DL+FPHHENE AQSC H+ +Q+VN W+H+G
Sbjct: 215 SILGTHFDIHGGGSDLQFPHHENEIAQSCCAHD-TQYVNTWMHSG 258
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 32 IKIYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIH 91
+KIYN +T+ K F + Y CG T+YD HIGH V D++ R L Y
Sbjct: 2 LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYL-RYLGYD 60
Query: 92 SIVISSVTDIDDKIINKANSLKEDYKTVAKRYFLPLI--FKILHQKVVGSIPTRGHAVCN 149
+ ++TDIDDKII +A E +++ +R + F L+ K P R A
Sbjct: 61 LTFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEP-RATAYIE 119
Query: 150 VKLDIIRRILEHYF 163
+ ++ R++E F
Sbjct: 120 EIIALVERLIERGF 133
>gi|433522782|ref|ZP_20479461.1| cysteine--tRNA ligase [Neisseria meningitidis 61103]
gi|432257297|gb|ELL12600.1| cysteine--tRNA ligase [Neisseria meningitidis 61103]
Length = 473
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 103/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQSCA-------------FHNQS--QWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS H QS V YWLH G +R
Sbjct: 218 GDTFDIHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 96
>gi|385341075|ref|YP_005894946.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240149]
gi|416175060|ref|ZP_11609368.1| cysteinyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
gi|416189388|ref|ZP_11615301.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M0579]
gi|433489259|ref|ZP_20446405.1| cysteine--tRNA ligase [Neisseria meningitidis M13255]
gi|325129292|gb|EGC52130.1| cysteinyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
gi|325135312|gb|EGC57933.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M0579]
gi|325201281|gb|ADY96735.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240149]
gi|432220189|gb|ELK76014.1| cysteine--tRNA ligase [Neisseria meningitidis M13255]
Length = 473
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 308 ESMEKFGVLPPTRATRVSEFIPHIQSFIQTLLDTKQAYIGSDHSVYFDVDSFPHYFKLWG 367
E + GVL P + +E IP + + I+TL+ +AY ++ VY+ V F Y +L G
Sbjct: 98 EDADALGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSG 157
Query: 368 RN-------ENITQHAVKRSPFDFALWKSAKPGEPWYESAWGKGRPGWHIECSAMASHFF 420
++ E + KR P DF LWK+AK GEP +ES WG GRPGWHIECSAM+ + F
Sbjct: 158 KSLDDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLF 217
Query: 421 GGQVDLHTGGIDLKFPHHENEEAQS-------CAFHNQ--------SQWVNYWLHTGHLR 465
G D+H GG DL+FPHHENE AQS C H+ + V YWLH G +R
Sbjct: 218 GDTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIR 277
Query: 466 GTDGTR 471
DG +
Sbjct: 278 -VDGEK 282
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 34 IYNPITKTKVPFIIQNKNHLKWYACGPTVYDSPHIGHAVCNVKLDIIRRILEHYFHIHSI 93
IYN +T+ K PF + +++ Y CG TVYD H+GHA V D+I R L + +
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGYPLTY 63
Query: 94 VISSVTDIDDKIINKANSLKEDYKTVAKRYFLPL 127
V ++TDIDDKII +A E + R+ +
Sbjct: 64 V-RNITDIDDKIIARAAENGETIGELTARFIQAM 96
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,427,643,129
Number of Sequences: 23463169
Number of extensions: 361161821
Number of successful extensions: 802634
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5675
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 768387
Number of HSP's gapped (non-prelim): 19551
length of query: 515
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 368
effective length of database: 8,910,109,524
effective search space: 3278920304832
effective search space used: 3278920304832
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 79 (35.0 bits)