BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13469
(74 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P91645|CAC1A_DROME Voltage-dependent calcium channel type A subunit alpha-1
OS=Drosophila melanogaster GN=cac PE=2 SV=3
Length = 1851
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 58/73 (79%)
Query: 1 MGPHSHHATASHRGPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEH 60
MG GP+SLF+L+E N +R+YTRFIIEWPPFEYAVLLTIIANCVVLALEEH
Sbjct: 1 MGGPKKEENPPGGGPTSLFILTEDNPIRKYTRFIIEWPPFEYAVLLTIIANCVVLALEEH 60
Query: 61 LPKGDKTALAKKL 73
LP GDKT LA+KL
Sbjct: 61 LPGGDKTVLAQKL 73
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 16 SSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEE 59
SS+F+LS TN +R+ +++ P F++ +++ I + + LA E+
Sbjct: 747 SSMFILSPTNPIRRGAHWVVNLPYFDFFIMVVISMSSIALAAED 790
>sp|C9D7C2|CAC1A_APIME Voltage-dependent calcium channel type A subunit alpha-1 OS=Apis
mellifera GN=CAC PE=2 SV=1
Length = 1904
Score = 105 bits (261), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/58 (82%), Positives = 54/58 (93%)
Query: 16 SSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTALAKKL 73
+SLF+LSE N +R++TRFIIEWPPFEYAVLLTIIANCVVLALEEHLPK DKT LA+KL
Sbjct: 146 TSLFILSEDNCIRKHTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKQDKTILAQKL 203
Score = 33.1 bits (74), Expect = 0.56, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 16 SSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEE 59
SS+F+LS TN VR+ +++ F++ +++ I + + LA E+
Sbjct: 875 SSMFILSPTNPVRRAAHWVVNLRYFDFFIMVVISLSSIALAAED 918
Score = 28.9 bits (63), Expect = 9.8, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 15 PSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEH 60
P ++ E N+V+ I+ PFEY ++ I+ N V+L ++ H
Sbjct: 1200 PLERYMPKERNSVKYKIWRIVVSTPFEYFIMGLIVLNTVLLMMKFH 1245
>sp|P56699|CAC1E_DIPOM Probable voltage-dependent R-type calcium channel subunit alpha-1E
OS=Diplobatis ommata PE=2 SV=1
Length = 2223
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 51/71 (71%), Gaps = 3/71 (4%)
Query: 3 PHSHHATASHRGPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLP 62
P H+ ++R SLFL E N VR+ R +IEWPPFEY +L TIIANCVVLALE+HLP
Sbjct: 70 PVRHNCLTANR---SLFLFGEDNIVRKSARRVIEWPPFEYMILATIIANCVVLALEQHLP 126
Query: 63 KGDKTALAKKL 73
GDKT +AK L
Sbjct: 127 NGDKTPMAKSL 137
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 16 SSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPK 63
+S+FL +TN +R+ FI+ FE +LL I A+ V LA E+ + K
Sbjct: 1083 TSMFLFRKTNPIRRVCHFIVNLRYFEMCILLVIAASSVALAAEDPIHK 1130
>sp|P56698|CAC1B_DIPOM Probable voltage-dependent N-type calcium channel subunit alpha-1B
OS=Diplobatis ommata PE=2 SV=1
Length = 2326
Score = 88.2 bits (217), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/57 (63%), Positives = 47/57 (82%)
Query: 17 SLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTALAKKL 73
SLF+ SE N +R+Y + I EWPPFEY +L TIIANC+VLALE+HLP GDKT ++++L
Sbjct: 67 SLFIFSEDNIIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSERL 123
Score = 36.2 bits (82), Expect = 0.065, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 16 SSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGD 65
+S+FL S TN VR+ +I+ FE +LL I + + LA E+ + +GD
Sbjct: 1125 NSMFLFSTTNPVRRACHYIVNLRYFEMCILLVITMSSIALAAEDPV-QGD 1173
>sp|Q02294|CAC1B_RAT Voltage-dependent N-type calcium channel subunit alpha-1B OS=Rattus
norvegicus GN=Cacna1b PE=1 SV=1
Length = 2336
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 47/57 (82%)
Query: 17 SLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTALAKKL 73
SLF+ SE N VR+Y + I EWPPFEY +L TIIANC+VLALE+HLP GDKT ++++L
Sbjct: 74 SLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSERL 130
>sp|Q05152|CAC1B_RABIT Voltage-dependent N-type calcium channel subunit alpha-1B
OS=Oryctolagus cuniculus GN=CACNA1B PE=1 SV=1
Length = 2339
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 47/57 (82%)
Query: 17 SLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTALAKKL 73
SLF+ SE N VR+Y + I EWPPFEY +L TIIANC+VLALE+HLP GDKT ++++L
Sbjct: 74 SLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSERL 130
>sp|Q00975|CAC1B_HUMAN Voltage-dependent N-type calcium channel subunit alpha-1B OS=Homo
sapiens GN=CACNA1B PE=1 SV=1
Length = 2339
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 47/57 (82%)
Query: 17 SLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTALAKKL 73
SLF+ SE N VR+Y + I EWPPFEY +L TIIANC+VLALE+HLP GDKT ++++L
Sbjct: 74 SLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSERL 130
>sp|O55017|CAC1B_MOUSE Voltage-dependent N-type calcium channel subunit alpha-1B OS=Mus
musculus GN=Cacna1b PE=1 SV=1
Length = 2327
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 47/57 (82%)
Query: 17 SLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTALAKKL 73
SLF+ SE N VR+Y + I EWPPFEY +L TIIANC+VLALE+HLP GDKT ++++L
Sbjct: 74 SLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSERL 130
>sp|P54282|CAC1A_RAT Voltage-dependent P/Q-type calcium channel subunit alpha-1A
OS=Rattus norvegicus GN=Cacna1a PE=1 SV=1
Length = 2212
Score = 86.3 bits (212), Expect = 6e-17, Method: Composition-based stats.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 17 SLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTALAKKL 73
SLFL SE N VR+Y + I EWPPFEY +L TIIANC+VLALE+HLP DKT ++++L
Sbjct: 79 SLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDDDKTPMSERL 135
>sp|P27884|CAC1A_RABIT Voltage-dependent P/Q-type calcium channel subunit alpha-1A
OS=Oryctolagus cuniculus GN=CACNA1A PE=1 SV=1
Length = 2424
Score = 85.9 bits (211), Expect = 6e-17, Method: Composition-based stats.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 17 SLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTALAKKL 73
SLFL SE N VR+Y + I EWPPFEY +L TIIANC+VLALE+HLP DKT ++++L
Sbjct: 77 SLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDDDKTPMSERL 133
>sp|O00555|CAC1A_HUMAN Voltage-dependent P/Q-type calcium channel subunit alpha-1A OS=Homo
sapiens GN=CACNA1A PE=1 SV=2
Length = 2505
Score = 85.9 bits (211), Expect = 6e-17, Method: Composition-based stats.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 17 SLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTALAKKL 73
SLFL SE N VR+Y + I EWPPFEY +L TIIANC+VLALE+HLP DKT ++++L
Sbjct: 77 SLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDDDKTPMSERL 133
>sp|P97445|CAC1A_MOUSE Voltage-dependent P/Q-type calcium channel subunit alpha-1A OS=Mus
musculus GN=Cacna1a PE=1 SV=2
Length = 2368
Score = 85.9 bits (211), Expect = 7e-17, Method: Composition-based stats.
Identities = 37/57 (64%), Positives = 46/57 (80%)
Query: 17 SLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTALAKKL 73
SLFL SE N VR+Y + I EWPPFEY +L TIIANC+VLALE+HLP DKT ++++L
Sbjct: 79 SLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDDDKTPMSERL 135
>sp|Q15878|CAC1E_HUMAN Voltage-dependent R-type calcium channel subunit alpha-1E OS=Homo
sapiens GN=CACNA1E PE=1 SV=3
Length = 2313
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 47/57 (82%)
Query: 17 SLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTALAKKL 73
SLF+ E N VR+Y + +I+WPPFEY +L TIIANC+VLALE+HLP+ DKT ++++L
Sbjct: 68 SLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSRRL 124
>sp|Q02343|CAC1E_RABIT Voltage-dependent R-type calcium channel subunit alpha-1E
OS=Oryctolagus cuniculus GN=CACNA1E PE=2 SV=1
Length = 2259
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 47/57 (82%)
Query: 17 SLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTALAKKL 73
SLF+ E N VR+Y + +I+WPPFEY +L TIIANC+VLALE+HLP+ DKT ++++L
Sbjct: 68 SLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSRRL 124
>sp|Q07652|CAC1E_RAT Voltage-dependent R-type calcium channel subunit alpha-1E
OS=Rattus norvegicus GN=Cacna1e PE=1 SV=1
Length = 2222
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 47/57 (82%)
Query: 17 SLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTALAKKL 73
SLF+ E N VR+Y + +I+WPPFEY +L TIIANC+VLALE+HLP+ DKT ++++L
Sbjct: 19 SLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSRRL 75
>sp|Q61290|CAC1E_MOUSE Voltage-dependent R-type calcium channel subunit alpha-1E OS=Mus
musculus GN=Cacna1e PE=1 SV=1
Length = 2272
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/57 (59%), Positives = 47/57 (82%)
Query: 17 SLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTALAKKL 73
SLF+ E N VR+Y + +I+WPPFEY +L TIIANC+VLALE+HLP+ DKT ++++L
Sbjct: 69 SLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSRRL 125
>sp|Q13936|CAC1C_HUMAN Voltage-dependent L-type calcium channel subunit alpha-1C OS=Homo
sapiens GN=CACNA1C PE=1 SV=4
Length = 2221
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%)
Query: 3 PHSHHATASHRGPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLP 62
P +T + R P +L L+ N +R+ I+EW PFE +LLTI ANCV LA+ P
Sbjct: 89 PKKQGSTTATRPPRALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFP 148
Query: 63 KGDKTALAKKL 73
+ D A L
Sbjct: 149 EDDSNATNSNL 159
>sp|P15381|CAC1C_RABIT Voltage-dependent L-type calcium channel subunit alpha-1C
OS=Oryctolagus cuniculus GN=CACNA1C PE=1 SV=1
Length = 2171
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%)
Query: 3 PHSHHATASHRGPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLP 62
P +T + R P +L L+ N +R+ I+EW PFE +LLTI ANCV LA+ P
Sbjct: 119 PKKQGSTTATRPPRALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFP 178
Query: 63 KGDKTALAKKL 73
+ D A L
Sbjct: 179 EDDSNATNSNL 189
>sp|Q01815|CAC1C_MOUSE Voltage-dependent L-type calcium channel subunit alpha-1C OS=Mus
musculus GN=Cacna1c PE=1 SV=1
Length = 2139
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 37/71 (52%)
Query: 3 PHSHHATASHRGPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLP 62
P T + R P +L L+ N +R+ I+EW PFE +LLTI ANCV LA+ P
Sbjct: 89 PKKQGGTTATRPPRALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFP 148
Query: 63 KGDKTALAKKL 73
+ D A L
Sbjct: 149 EDDSNATNSNL 159
>sp|P22002|CAC1C_RAT Voltage-dependent L-type calcium channel subunit alpha-1C OS=Rattus
norvegicus GN=Cacna1c PE=1 SV=1
Length = 2169
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 37/71 (52%)
Query: 3 PHSHHATASHRGPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLP 62
P T + R P +L L+ N +R+ I+EW PFE +LLTI ANCV LA+ P
Sbjct: 119 PKKQGGTTATRPPRALLCLTLKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFP 178
Query: 63 KGDKTALAKKL 73
+ D A L
Sbjct: 179 EDDSNATNSNL 189
>sp|Q9JIS7|CAC1F_MOUSE Voltage-dependent L-type calcium channel subunit alpha-1F OS=Mus
musculus GN=Cacna1f PE=1 SV=1
Length = 1985
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 4 HSHHAT----ASHRGPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEE 59
H+ H T ++ R P +LF L+ TN +R+ I+EW PF+ +LLTI ANCV L +
Sbjct: 54 HNKHKTVAVASAQRSPRALFCLTLTNPIRRSCISIVEWKPFDILILLTIFANCVALGVYI 113
Query: 60 HLPKGDKT 67
P+ D
Sbjct: 114 PFPEDDSN 121
>sp|P07293|CAC1S_RABIT Voltage-dependent L-type calcium channel subunit alpha-1S
OS=Oryctolagus cuniculus GN=CACNA1S PE=1 SV=1
Length = 1873
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 13 RGPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTAL 69
R P +LF L+ N +R+ I+EW PFE +LLTI ANCV LA+ +P+ D +L
Sbjct: 26 RPPRALFCLTLQNPLRKACISIVEWKPFETIILLTIFANCVALAVYLPMPEDDNNSL 82
>sp|O60840|CAC1F_HUMAN Voltage-dependent L-type calcium channel subunit alpha-1F OS=Homo
sapiens GN=CACNA1F PE=1 SV=2
Length = 1977
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 4 HSHHAT----ASHRGPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEE 59
HS H T ++ R P +LF L+ N +R+ I+EW PF+ +LLTI ANCV L +
Sbjct: 54 HSKHKTVAVASAQRSPRALFCLTLANPLRRSCISIVEWKPFDILILLTIFANCVALGVYI 113
Query: 60 HLPKGD 65
P+ D
Sbjct: 114 PFPEDD 119
>sp|Q13698|CAC1S_HUMAN Voltage-dependent L-type calcium channel subunit alpha-1S OS=Homo
sapiens GN=CACNA1S PE=1 SV=4
Length = 1873
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 13 RGPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTAL 69
R P +LF L+ N +R+ I+EW PFE +LLTI ANCV LA+ +P+ D +L
Sbjct: 26 RPPRALFCLTLENPLRKACISIVEWKPFETIILLTIFANCVALAVYLPMPEDDNNSL 82
>sp|O73700|CAC1D_CHICK Voltage-dependent L-type calcium channel subunit alpha-1D OS=Gallus
gallus GN=CACNA1D PE=2 SV=1
Length = 2190
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 9 TASHRGPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTA 68
T++ R P +LF LS N +R+ ++EW PF+ +LL+I ANCV LA+ P+ D +
Sbjct: 92 TSNSRPPRALFCLSLNNPIRRACISLVEWKPFDIFILLSIFANCVALAVYIPFPEDDSNS 151
Query: 69 LAKKL 73
L
Sbjct: 152 TNHNL 156
>sp|Q02789|CAC1S_MOUSE Voltage-dependent L-type calcium channel subunit alpha-1S OS=Mus
musculus GN=Cacna1s PE=1 SV=2
Length = 1880
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 13 RGPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTAL 69
R P +LF L+ N +R+ I+EW PFE +LLTI ANCV LA+ +P+ D L
Sbjct: 26 RPPRALFCLTLQNPLRKACISIVEWKPFETIILLTIFANCVALAVYLPMPEDDNNTL 82
>sp|P22316|CAC1S_CYPCA Dihydropyridine-sensitive L-type skeletal muscle calcium channel
subunit alpha-1 OS=Cyprinus carpio PE=2 SV=1
Length = 1852
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 13 RGPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGD 65
R P SLF + N R+ I+EW PFE +LLTI ANCV LA+ +P+ D
Sbjct: 45 RPPRSLFFFTLKNPFRKTCINIVEWKPFEIIILLTIFANCVALAVFLPMPEED 97
>sp|Q24270|CAC1D_DROME Voltage-dependent calcium channel type D subunit alpha-1
OS=Drosophila melanogaster GN=Ca-alpha1D PE=1 SV=2
Length = 2516
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 33/61 (54%)
Query: 13 RGPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTALAKK 72
R +LF LS N +R I+EW PFE+ +LLTI ANC+ LA+ P D +
Sbjct: 590 RPQRALFCLSVKNPLRALCIRIVEWKPFEFLILLTIFANCIALAVYTPYPGSDSNVTNQT 649
Query: 73 L 73
L
Sbjct: 650 L 650
>sp|O57483|CAC1S_LITCT Voltage-dependent L-type calcium channel subunit alpha-1S
OS=Lithobates catesbeiana PE=2 SV=1
Length = 1688
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 17 SLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTA 68
+LF L N R++ I+EW PFE +LLTI ANCV LA+ +P+ D +
Sbjct: 30 ALFCLGLQNPFRKFCINIVEWKPFEMIILLTIFANCVALAIFLPMPEDDTNS 81
>sp|Q99244|CAC1D_MESAU Voltage-dependent L-type calcium channel subunit alpha-1D
OS=Mesocricetus auratus GN=CACNA1D PE=2 SV=2
Length = 1610
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 9 TASHRGPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTA 68
+++ R +LF LS N +R+ I+EW PF+ +LL I ANCV LA+ P+ D +
Sbjct: 96 SSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNS 155
Query: 69 LAKKL 73
L
Sbjct: 156 TNHNL 160
>sp|Q99246|CAC1D_MOUSE Voltage-dependent L-type calcium channel subunit alpha-1D OS=Mus
musculus GN=Cacna1d PE=1 SV=3
Length = 2179
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 9 TASHRGPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTA 68
+++ R +LF LS N +R+ I+EW PF+ +LL I ANCV LA+ P+ D +
Sbjct: 97 SSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNS 156
Query: 69 LAKKL 73
L
Sbjct: 157 TNHNL 161
>sp|Q01668|CAC1D_HUMAN Voltage-dependent L-type calcium channel subunit alpha-1D OS=Homo
sapiens GN=CACNA1D PE=1 SV=2
Length = 2161
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 9 TASHRGPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTA 68
+++ R +LF LS N +R+ I+EW PF+ +LL I ANCV LA+ P+ D +
Sbjct: 97 SSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNS 156
Query: 69 LAKKL 73
L
Sbjct: 157 TNHNL 161
>sp|P27732|CAC1D_RAT Voltage-dependent L-type calcium channel subunit alpha-1D OS=Rattus
norvegicus GN=Cacna1d PE=1 SV=2
Length = 2203
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 9 TASHRGPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTA 68
+++ R +LF LS N +R+ I++W PF+ +LL I ANCV LA+ P+ D +
Sbjct: 97 SSNSRPARALFCLSLNNPIRRACISIVDWKPFDIFILLAIFANCVALAIYIPFPEDDSNS 156
Query: 69 LAKKL 73
L
Sbjct: 157 TNHNL 161
>sp|Q25452|CAC1M_MUSDO Muscle calcium channel subunit alpha-1 OS=Musca domestica PE=2
SV=1
Length = 1687
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 13 RGPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGD 65
R +LF L+ N +R + I++ FEY +LLTI ANCV LA+ P GD
Sbjct: 36 RPERALFCLTLKNPLRIFCIKIVDSKLFEYFILLTIFANCVALAVYTPYPSGD 88
>sp|Q9W0Y8|SCN60_DROME Sodium channel protein 60E OS=Drosophila melanogaster GN=NaCP60E
PE=2 SV=5
Length = 2821
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 12 HR--GPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEEHLPKGDKTAL 69
HR G SLFL + R+ +I F+Y V+ TI+ NC+ LA+ E + + + L
Sbjct: 98 HRFTGTKSLFLFYPWSPARRVCVYIATNQFFDYCVMATILFNCIFLAMTETVEEAEYIFL 157
Query: 70 A 70
A
Sbjct: 158 A 158
>sp|Q9P0X4|CAC1I_HUMAN Voltage-dependent T-type calcium channel subunit alpha-1I OS=Homo
sapiens GN=CACNA1I PE=1 SV=1
Length = 2223
Score = 33.5 bits (75), Expect = 0.41, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 17 SLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALE 58
S++L S N R + II F+Y VL I NC+ +ALE
Sbjct: 1149 SVYLFSPENRFRVLCQTIIAHKLFDYVVLAFIFLNCITIALE 1190
>sp|Q9Z0Y8|CAC1I_RAT Voltage-dependent T-type calcium channel subunit alpha-1I OS=Rattus
norvegicus GN=Cacna1i PE=2 SV=3
Length = 2201
Score = 33.5 bits (75), Expect = 0.42, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 17 SLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALE 58
S++L S N R + II F+Y VL I NC+ +ALE
Sbjct: 1108 SVYLFSPENKFRILCQTIIAHKLFDYVVLAFIFLNCITIALE 1149
>sp|Q05973|SCN1_LOLBL Sodium channel protein 1 brain OS=Loligo bleekeri PE=2 SV=1
Length = 1522
Score = 33.5 bits (75), Expect = 0.42, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 17 SLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEE 59
SLFL + N +R+ I F+Y ++ TI+ NCV LA+ +
Sbjct: 34 SLFLFTPRNPIRRLAVCIATNVCFDYFLMFTIMINCVFLAMPD 76
>sp|Q2XVR4|SC4AB_TETNG Sodium channel protein type 4 subunit alpha B OS=Tetraodon
nigroviridis GN=scn4ab PE=3 SV=1
Length = 1715
Score = 33.1 bits (74), Expect = 0.59, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 12 HR--GPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALEE 59
HR SSL+LLS N++R + I+ F ++ TI+ NCV + L +
Sbjct: 98 HRFNAESSLYLLSPFNSMRIFAIKILVHSLFSLFIMATILTNCVFMTLSD 147
>sp|O95180|CAC1H_HUMAN Voltage-dependent T-type calcium channel subunit alpha-1H OS=Homo
sapiens GN=CACNA1H PE=1 SV=4
Length = 2353
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 17 SLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALE 58
+L+L S N R + +I F++ VL+ I NCV +ALE
Sbjct: 1273 ALYLFSPQNRFRVSCQKVITHKMFDHVVLVFIFLNCVTIALE 1314
>sp|Q08D11|PTSS2_XENTR Phosphatidylserine synthase 2 OS=Xenopus tropicalis GN=ptdss2 PE=2
SV=2
Length = 474
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 18 LFLLSETNTVRQYTRFIIEWPPFEYAVLLTII--ANCVVLALEEHLPKGDKTALAKKL 73
+FLL+E NT Y +F++ PP Y VLL ++ N +A+ E D KKL
Sbjct: 323 VFLLAELNTF--YLKFVLWMPPEHYLVLLRLVFFVNVGGVAMREIYDFMDDLKFHKKL 378
>sp|E1BYA3|PTSS2_CHICK Phosphatidylserine synthase 2 OS=Gallus gallus GN=PTDSS1 PE=3 SV=1
Length = 442
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 18 LFLLSETNTVRQYTRFIIEWPPFEYAVLLTII--ANCVVLALEEHLPKGDKTALAKKL 73
+FLL+E NT Y +F++ PP Y VLL ++ N +A+ E D KKL
Sbjct: 301 VFLLAELNTF--YLKFVLWMPPEHYLVLLRLVFFVNVGGVAMREIYDFMDDPKFHKKL 356
>sp|O88427|CAC1H_MOUSE Voltage-dependent T-type calcium channel subunit alpha-1H OS=Mus
musculus GN=Cacna1h PE=2 SV=3
Length = 2365
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 10 ASHRGPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALE 58
S R +L+L N +R + +I F++ VL+ I NC+ +ALE
Sbjct: 1277 CSSRESWALYLFPPQNRLRVSCQKVIAHKMFDHVVLVFIFLNCITIALE 1325
>sp|P08104|SCN3A_RAT Sodium channel protein type 3 subunit alpha OS=Rattus norvegicus
GN=Scn3a PE=1 SV=1
Length = 1951
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 16 SSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLAL 57
S+L++L+ N VR+ I+ F ++ TI+ NCV + L
Sbjct: 106 SALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTL 147
>sp|Q9NY46|SCN3A_HUMAN Sodium channel protein type 3 subunit alpha OS=Homo sapiens
GN=SCN3A PE=1 SV=2
Length = 2000
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 16 SSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLAL 57
S+L++L+ N VR+ I+ F ++ TI+ NCV + L
Sbjct: 106 SALYILTPLNPVRKIAIKILVHSLFSMLIMCTILTNCVFMTL 147
>sp|Q9EQ60|CAC1H_RAT Voltage-dependent T-type calcium channel subunit alpha-1H OS=Rattus
norvegicus GN=Cacna1h PE=2 SV=2
Length = 2359
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 17 SLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLALE 58
+L+L N +R + +I F++ VL+ I NC+ +ALE
Sbjct: 1284 ALYLFPPQNRLRVSCQKVIAHKMFDHVVLVFIFLNCITIALE 1325
>sp|Q9Z1X2|PTSS2_MOUSE Phosphatidylserine synthase 2 OS=Mus musculus GN=Ptdss2 PE=2 SV=2
Length = 473
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 7/47 (14%)
Query: 8 ATASHR-----GPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTII 49
A++ HR G +FLL+E NT Y +F++ PP Y VLL ++
Sbjct: 286 ASSLHRWLAVCGIILVFLLAELNTF--YLKFVLWMPPEHYLVLLRLV 330
>sp|O08888|PTSS2_CRIGR Phosphatidylserine synthase 2 OS=Cricetulus griseus GN=PTDSS2 PE=2
SV=1
Length = 474
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 7/47 (14%)
Query: 8 ATASHR-----GPSSLFLLSETNTVRQYTRFIIEWPPFEYAVLLTII 49
A++ HR G +FLL+E NT Y +F++ PP Y VLL ++
Sbjct: 286 ASSLHRWLAVCGIILVFLLAELNTF--YLKFVLWMPPEHYLVLLRLV 330
>sp|Q9BVG9|PTSS2_HUMAN Phosphatidylserine synthase 2 OS=Homo sapiens GN=PTDSS2 PE=1 SV=1
Length = 487
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 18 LFLLSETNTVRQYTRFIIEWPPFEYAVLLTII 49
+FLL+E NT Y +F++ PP Y VLL ++
Sbjct: 323 VFLLAELNTF--YLKFVLWMPPEHYLVLLRLV 352
>sp|P35500|SCNA_DROME Sodium channel protein para OS=Drosophila melanogaster GN=para PE=2
SV=3
Length = 2131
Score = 29.6 bits (65), Expect = 5.8, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 25/41 (60%)
Query: 17 SLFLLSETNTVRQYTRFIIEWPPFEYAVLLTIIANCVVLAL 57
++++L N +R+ +I+ P F ++ TI+ NC+++ +
Sbjct: 132 AMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIM 172
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,289,842
Number of Sequences: 539616
Number of extensions: 780276
Number of successful extensions: 1490
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1403
Number of HSP's gapped (non-prelim): 94
length of query: 74
length of database: 191,569,459
effective HSP length: 45
effective length of query: 29
effective length of database: 167,286,739
effective search space: 4851315431
effective search space used: 4851315431
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)