BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13471
(249 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3S4E|A Chain A, Crystal Structrue Of A Novel Mitogen-Activated Protein
Kinase Phosphatase, Skrp1
Length = 144
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Query: 9 LYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDLLSHFDSA 68
L LG + A L + + + + ++ +S TY+ I + DLP ++LS+F
Sbjct: 11 LLLGSQDAAHDLDTLKKNKVTHILNVAYGVENAFLSDFTYKSISILDLPETNILSYFPEC 70
Query: 69 YEFIRESQ-SEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARDVISPNEG 127
+EFI E++ +G +LVH GVSR+A IVI +LM + +AF VK+AR I PN G
Sbjct: 71 FEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPSICPNSG 130
Query: 128 FMHQLALYQRMR 139
FM QL YQ +
Sbjct: 131 FMEQLRTYQEGK 142
>pdb|3LJ8|A Chain A, Crystal Structure Of Mkp-4
Length = 146
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 7/142 (4%)
Query: 1 MPNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTL----GKISSLTYRHIEVADL 56
P + NLYLG D+ L+S + I+++ ++ P L K Y+ I ++D
Sbjct: 2 FPVQILPNLYLGSARDSANLESLAKLGIRYILNVT--PNLPNFFEKNGDFHYKQIPISDH 59
Query: 57 PSEDLLSHFDSAYEFIRESQSEG-AILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRV 115
S++L F A EFI E+ S+ +LVHC GVSRS T+ +AYLM++ L + A+D V
Sbjct: 60 WSQNLSRFFPEAIEFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLMQKLHLSLNDAYDLV 119
Query: 116 KSARDVISPNEGFMHQLALYQR 137
K + ISPN FM QL ++R
Sbjct: 120 KRKKSNISPNFNFMGQLLDFER 141
>pdb|2HXP|A Chain A, Crystal Structure Of The Human Phosphatase (Dusp9)
Length = 155
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 78/142 (54%), Gaps = 7/142 (4%)
Query: 1 MPNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTL----GKISSLTYRHIEVADL 56
P + NLYLG D+ L+S + I+++ ++ P L K Y+ I ++D
Sbjct: 5 FPVQILPNLYLGSARDSANLESLAKLGIRYILNVT--PNLPNFFEKNGDFHYKQIPISDH 62
Query: 57 PSEDLLSHFDSAYEFIRESQSEG-AILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRV 115
S++L F A EFI E+ S+ +LVH GVSRS T+ +AYLM++ L + A+D V
Sbjct: 63 WSQNLSRFFPEAIEFIDEALSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSLNDAYDLV 122
Query: 116 KSARDVISPNEGFMHQLALYQR 137
K + ISPN FM QL ++R
Sbjct: 123 KRKKSNISPNFNFMGQLLDFER 144
>pdb|1WRM|A Chain A, Crystal Structure Of Jsp-1
Length = 165
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Query: 3 NLVEENLYLGDLNDAMGLKSSNEANIKFVFSI--GIFPTLGKISSLTYRHIEVADLPSED 60
N + LY+G+ DA + ++ + + S+ P L + Y I AD PS++
Sbjct: 8 NKILPGLYIGNFKDARDAEQLSKNKVTHILSVHDSARPML---EGVKYLCIPAADSPSQN 64
Query: 61 LLSHFDSAYEFIRESQSEG-AILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSAR 119
L HF + +FI E + G + LVHC GVSRS T+VIAY+M D G + A V++ R
Sbjct: 65 LTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGR 124
Query: 120 DVISPNEGFMHQLALYQR 137
+PN GF QL +++
Sbjct: 125 SCANPNVGFQRQLQEFEK 142
>pdb|2NT2|A Chain A, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|B Chain B, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|C Chain C, Crystal Structure Of Slingshot Phosphatase 2
Length = 145
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSI-----GIFPTLGKISSLTYRHIEVADL 56
P + E+++LG +A L+ ++++ ++ FP + Y +I V D
Sbjct: 4 PTQIFEHVFLGSEWNASNLEDLQNRGVRYILNVTREIDNFFPGV-----FEYHNIRVYDE 58
Query: 57 PSEDLLSHFDSAYEFIRESQSEGA-ILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRV 115
+ DLL++++ Y+FI +++ G+ LVH GVSRSA+ VIAY MK + A+D V
Sbjct: 59 EATDLLAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKEYGWNLDRAYDYV 118
Query: 116 KSARDVISPNEGFMHQLALYQ 136
K R V PN FM QL YQ
Sbjct: 119 KERRTVTKPNPSFMRQLEEYQ 139
>pdb|1MKP|A Chain A, Crystal Structure Of Pyst1 (Mkp3)
Length = 144
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 74/135 (54%), Gaps = 9/135 (6%)
Query: 9 LYLGDLNDAMGLKSSNEANIKFVFSI-----GIFPTLGKISSLTYRHIEVADLPSEDLLS 63
LYLG D+ L E IK++ ++ +F G+ Y+ I ++D S++L
Sbjct: 11 LYLGCAKDSTNLDVLEEFGIKYILNVTPNLPNLFENAGE---FKYKQIPISDHWSQNLSQ 67
Query: 64 HFDSAYEFIRESQSEG-AILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARDVI 122
F A FI E++ + +LVH G+SRS T+ +AYLM++ +L + A+D VK + I
Sbjct: 68 FFPEAISFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNI 127
Query: 123 SPNEGFMHQLALYQR 137
SPN FM QL ++R
Sbjct: 128 SPNFNFMGQLLDFER 142
>pdb|2WGP|A Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14
pdb|2WGP|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14
Length = 190
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
Query: 48 YRHIEVADLPSEDLLSHFDSAYEFIRE-SQSEGAILVHCYHGVSRSATIVIAYLMKRDDL 106
Y + +AD+P + +FD+ + I S+ GA LVHC GVSRSAT+ IAYLMK ++
Sbjct: 72 YVKVPLADMPHAPIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMKFHNV 131
Query: 107 GVQTAFDRVKSARDVISPNEGFMHQLALYQRM---RMTLDLNFTPYKL 151
+ A++ VK+ R VI PN GF QL Y+R + T+ + TPY +
Sbjct: 132 CLLEAYNWVKARRPVIRPNVGFWRQLIDYERQLFGKSTVKMVQTPYGI 179
>pdb|2G6Z|A Chain A, Crystal Structure Of Human Dusp5
pdb|2G6Z|B Chain B, Crystal Structure Of Human Dusp5
pdb|2G6Z|C Chain C, Crystal Structure Of Human Dusp5
Length = 211
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Query: 9 LYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDLLSHFDSA 68
LYLG A + +I + ++ + ++ L Y+ I V D + D+ SHF A
Sbjct: 13 LYLGSAYHASKCEFLANLHITALLNVSRRTSEACMTHLHYKWIPVEDSHTADISSHFQEA 72
Query: 69 YEFIRESQSEGA-ILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARDVISPNEG 127
+FI + +G +LVH G+SRS TI +AYLMK ++ AFD +K R ++SPN G
Sbjct: 73 IDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRSMVSPNFG 132
Query: 128 FMHQLALYQ 136
FM QL Y+
Sbjct: 133 FMGQLLQYE 141
>pdb|1YZ4|A Chain A, Crystal Structure Of Dusp15
pdb|1YZ4|B Chain B, Crystal Structure Of Dusp15
Length = 160
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Query: 8 NLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDLLSHFDS 67
LYLG+ DA L I + SI P + +TY I VAD P + HF
Sbjct: 14 GLYLGNFIDAKDLDQLGRNKITHIISIHESPQ-PLLQDITYLRIPVADTPEVPIKKHFKE 72
Query: 68 AYEFIRESQSEGA-ILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARDVISPNE 126
FI + G LVH + G+SRS TIV AY+M LG + + +K+ R + +PN
Sbjct: 73 CINFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKATRPIANPNP 132
Query: 127 GFMHQL-----ALYQRMRMTLDLNF 146
GF QL A Q++R L+ F
Sbjct: 133 GFRQQLEEFGWASSQKLRRQLEERF 157
>pdb|2E0T|A Chain A, Crystal Structure Of Catalytic Domain Of Dual Specificity
Phosphatase 26, Ms0830 From Homo Sapiens
Length = 151
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 76/147 (51%), Gaps = 9/147 (6%)
Query: 5 VEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISS-----LTYRHIEVADLPSE 59
V LYLGD + A + I V + G + + Y +E D P+
Sbjct: 5 VWPGLYLGDQDMANNRRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPAF 64
Query: 60 DLLSHFDSAYEFIRE--SQSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKS 117
D+ HF +A +FI SQ G ILVHC GVSRSAT+V+AYLM L + A +VK
Sbjct: 65 DMSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKD 124
Query: 118 ARDVISPNEGFMHQ-LALYQRMRMTLD 143
R +I PN GF+ Q LAL +R+R L+
Sbjct: 125 HRGII-PNRGFLRQLLALDRRLRQGLE 150
>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
Length = 183
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 42 KISSLTYRHIEVADLPSEDLLSHFDSAYEFIRES--QSEGAILVHCYHGVSRSATIVIAY 99
K S +TY I+ D +L ++F+ A +FI ++ Q G +LVHC G SRS T+VIAY
Sbjct: 77 KDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAY 136
Query: 100 LMKRDDLGVQTAFDRVKSARDVISPNEGFMHQL 132
LM R + V++A V+ R+ I PN+GF+ QL
Sbjct: 137 LMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQL 168
>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
Length = 184
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 42 KISSLTYRHIEVADLPSEDLLSHFDSAYEFIRES--QSEGAILVHCYHGVSRSATIVIAY 99
K S +TY I+ D +L ++F+ A +FI ++ Q G +LVHC G SRS T+VIAY
Sbjct: 78 KDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAY 137
Query: 100 LMKRDDLGVQTAFDRVKSARDVISPNEGFMHQL 132
LM R + V++A V+ R+ I PN+GF+ QL
Sbjct: 138 LMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQL 169
>pdb|4HRF|A Chain A, Atomic Structure Of Dusp26
pdb|4HRF|B Chain B, Atomic Structure Of Dusp26
pdb|4HRF|C Chain C, Atomic Structure Of Dusp26
pdb|4HRF|D Chain D, Atomic Structure Of Dusp26
Length = 160
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Query: 5 VEENLYLGDLNDAMGLKSSNEANIKFVFSIGI-----FPTLGKISSLTYRHIEVADLPSE 59
V LYLGD + A + I V + P + + Y +E D P+
Sbjct: 6 VWPGLYLGDQDMANNRRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPAF 65
Query: 60 DLLSHFDSAYEFIRE--SQSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKS 117
D+ HF +A +FI SQ G ILVH GVSRSAT+V+AYLM L + A +VK
Sbjct: 66 DMSIHFQTAADFIHRALSQPGGKILVHSAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKD 125
Query: 118 ARDVISPNEGFMHQ-LALYQRMRMTLD 143
R +I PN GF+ Q LAL +R+R L+
Sbjct: 126 HRGII-PNRGFLRQLLALDRRLRQGLE 151
>pdb|2ESB|A Chain A, Crystal Structure Of Human Dusp18
Length = 188
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 19/176 (10%)
Query: 5 VEENLYLGD---LNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDL 61
+ ++LY+ + N+ + L SSN+ + S+ + TL + + Y + VAD P+ L
Sbjct: 23 ITKSLYISNGVAANNKLML-SSNQITMVINVSVEVVNTLYE--DIQYMQVPVADSPNSRL 79
Query: 62 LSHFDSAYEFIRESQ-SEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARD 120
FD + I + +G L+HC GVSRSA + +AYLMK + + A KS R
Sbjct: 80 CDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMSLLDAHTWTKSCRP 139
Query: 121 VISPNEGFMHQLALYQRMRMTLDLNFTPYKLYKLKRLSQIVKDVRLVPSSYGELIK 176
+I PN GF QL Y+ ++L+ + + V ++P Y + ++
Sbjct: 140 IIRPNSGFWEQLIHYE------------FQLFGKNTVHMVSSPVGMIPDIYEKEVR 183
>pdb|2OUD|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mkp5
Length = 177
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 85/162 (52%), Gaps = 11/162 (6%)
Query: 9 LYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISS--LTYRHIEVADLPSEDLLSHFD 66
L+LG+ DA L + NI +V ++ L Y+ + D ++L +F+
Sbjct: 15 LFLGNEQDAQDLDTMQRLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNKQNLRQYFE 74
Query: 67 SAYEFIRESQSEG-AILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARDVISPN 125
A+EFI E+ G +L+HC GVSRSATIVIAYLMK + + A+ VK R +ISPN
Sbjct: 75 EAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPN 134
Query: 126 EGFMHQLALYQRMRMTLDLN--FTPYKLY-KLKRLSQIVKDV 164
FM QL ++ DLN TP L KL + +VK+
Sbjct: 135 LNFMGQLLEFEE-----DLNNGVTPRILTPKLMGVETVVKEA 171
>pdb|1J4X|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase C124s
Mutant- Peptide Complex
Length = 184
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 42 KISSLTYRHIEVADLPSEDLLSHFDSAYEFIRES--QSEGAILVHCYHGVSRSATIVIAY 99
K S +TY I+ D +L ++F+ A +FI ++ Q G +LVH G SRS T+VIAY
Sbjct: 78 KDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHSREGYSRSPTLVIAY 137
Query: 100 LMKRDDLGVQTAFDRVKSARDVISPNEGFMHQL 132
LM R + V++A V+ R+ I PN+GF+ QL
Sbjct: 138 LMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQL 169
>pdb|1ZZW|A Chain A, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
pdb|1ZZW|B Chain B, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
Length = 149
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 70/127 (55%), Gaps = 3/127 (2%)
Query: 9 LYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISS--LTYRHIEVADLPSEDLLSHFD 66
L+LG+ DA L + NI +V ++ L Y+ + D ++L +F+
Sbjct: 11 LFLGNEQDAQDLDTMQRLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNKQNLRQYFE 70
Query: 67 SAYEFIRESQSEG-AILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARDVISPN 125
A+EFI E+ G +L+HC GVSRSATIVIAYLMK + + A+ VK R +ISPN
Sbjct: 71 EAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPN 130
Query: 126 EGFMHQL 132
FM QL
Sbjct: 131 LNFMGQL 137
>pdb|2R0B|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase-like
Serine/threonine/tyrosine-interacting Protein
Length = 154
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 48 YRHIEVADLPSEDLLSHFDSAYEFIRES-QSEGAILVHCYHGVSRSATIVIAYLMKRDDL 106
Y +++AD P E+++ F EFI S Q G +LVH G+SRSA VIAY+M+ +
Sbjct: 59 YLVLDIADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRSAAFVIAYIMETFGM 118
Query: 107 GVQTAFDRVKSARDVISPNEGFMHQLALYQRMRMT 141
+ AF V+ R I+PN GF+HQL Y+ + +
Sbjct: 119 KYRDAFAYVQERRFCINPNAGFVHQLQEYEAIYLA 153
>pdb|2HCM|A Chain A, Crystal Structure Of Mouse Putative Dual Specificity
Phosphatase Complexed With Zinc Tungstate, New York
Structural Genomics Consortium
Length = 164
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
Query: 5 VEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDLLSH 64
V L++G+ A + A I ++ + + + V D P+EDLL+H
Sbjct: 15 VAPALFIGNARAAGATELLVRAGITLCVNVSRQQPGPRAPGVAELRVPVFDDPAEDLLTH 74
Query: 65 FDSAYEFIRES-QSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARDVIS 123
+ + + + G+ LV+C +G SRSA + AYLM+ + AF VKSAR V
Sbjct: 75 LEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRHRGHSLDRAFQMVKSARPVAE 134
Query: 124 PNEGFMHQLALYQR 137
PN GF QL Y++
Sbjct: 135 PNLGFWAQLQKYEQ 148
>pdb|2Y96|A Chain A, Structure Of Human Dual-Specificity Phosphatase 27
pdb|2Y96|B Chain B, Structure Of Human Dual-Specificity Phosphatase 27
Length = 219
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 3 NLVEENLYLGDLNDAMGLKSSNEANIKFV-------FSIGIFPTLGKISSLTYRHIEVAD 55
N V LY+GD A+ +A V +++ P + + Y +E D
Sbjct: 55 NEVWPKLYIGDEATALDRYRLQKAGFTHVLNAAHGRWNVDTGPDYYRDMDIQYHGVEADD 114
Query: 56 LPSEDLLSHFDSAYEFIRESQSE--GAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFD 113
LP+ DL F A FI + S+ ILVHC G SRSAT+V+AYLM D+ + A
Sbjct: 115 LPTFDLSVFFYPAAAFIDRALSDDHSKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAIQ 174
Query: 114 RVKSARDVISPNEGFMHQL 132
+V R V+ PN GF+ QL
Sbjct: 175 QVAKNRCVL-PNRGFLKQL 192
>pdb|2PQ5|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|B Chain B, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|C Chain C, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|D Chain D, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
Length = 205
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 45 SLTYRHIEVADLPSEDLLSHFDSAYEFIRESQS--EGAILVHCYHGVSRSATIVIAYLMK 102
SL Y IE D P DL +F +IR + S +G +LVHC GVSRSAT+V+A+LM
Sbjct: 96 SLEYYGIEADDNPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMI 155
Query: 103 RDDLGVQTAFDRVKSARDVISPNEGFMHQL 132
+++ + A V++ R+ I PN GF+ QL
Sbjct: 156 YENMTLVEAIQTVQAHRN-ICPNSGFLRQL 184
>pdb|2GWO|A Chain A, Crystal Structure Of Tmdp
pdb|2GWO|B Chain B, Crystal Structure Of Tmdp
pdb|2GWO|C Chain C, Crystal Structure Of Tmdp
pdb|2GWO|D Chain D, Crystal Structure Of Tmdp
Length = 198
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 45 SLTYRHIEVADLPSEDLLSHFDSAYEFIRESQS--EGAILVHCYHGVSRSATIVIAYLMK 102
SL Y IE D P DL +F +IR + S +G +LVHC GVSRSAT+V+A+LM
Sbjct: 96 SLEYYGIEADDNPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMI 155
Query: 103 RDDLGVQTAFDRVKSARDVISPNEGFMHQL 132
+++ + A V++ R+ I PN GF+ QL
Sbjct: 156 CENMTLVEAIQTVQAHRN-ICPNSGFLRQL 184
>pdb|3EZZ|A Chain A, Crystal Structure Of Human Mkp-2
pdb|3EZZ|B Chain B, Crystal Structure Of Human Mkp-2
pdb|3EZZ|C Chain C, Crystal Structure Of Human Mkp-2
pdb|3EZZ|D Chain D, Crystal Structure Of Human Mkp-2
pdb|3EZZ|E Chain E, Crystal Structure Of Human Mkp-2
pdb|3EZZ|F Chain F, Crystal Structure Of Human Mkp-2
Length = 144
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 48 YRHIEVADLPSEDLLSHFDSAYEFIRESQ-SEGAILVHCYHGVSRSATIVIAYLMKRDDL 106
Y+ I V D D+ S F A E+I + G +LVH G+SRSATI +AYLM + +
Sbjct: 50 YKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLMMKKRV 109
Query: 107 GVQTAFDRVKSARDVISPNEGFMHQLALYQ 136
++ AF+ VK R +ISPN FM QL ++
Sbjct: 110 RLEEAFEFVKQRRSIISPNFSFMGQLLQFE 139
>pdb|1M3G|A Chain A, Solution Structure Of The Catalytic Domain Of Mapk
Phosphatase Pac-1: Insights Into Substrate-Induced
Enzymatic Activation
Length = 145
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Query: 9 LYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDLLSHFDSA 68
L+LG + + L+ I V ++ Y+ I V D ++ + F A
Sbjct: 11 LFLGSCSHSSDLQGLQACGITAVLNVSASCPNHFEGLFRYKSIPVEDNQMVEISAWFQEA 70
Query: 69 YEFIRESQSEGA-ILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARDVISPNEG 127
FI ++ G +LVH G+SRSATI +AYLM+ + + AFD VK R VISPN
Sbjct: 71 IGFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQSRRVRLDEAFDFVKQRRGVISPNFS 130
Query: 128 FMHQLALYQ 136
FM QL ++
Sbjct: 131 FMGQLLQFE 139
>pdb|2J16|B Chain B, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 41/56 (73%)
Query: 81 ILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARDVISPNEGFMHQLALYQ 136
IL+HC G+SRSAT++IAY+MK +L ++ ++D +KS D I+P+ G + QL ++
Sbjct: 120 ILIHCQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWE 175
>pdb|2RF6|A Chain A, Crystal Structure Of The Vaccinia Virus Dual-Specificity
Phosphatase Vh1
pdb|3CM3|A Chain A, High Resolution Crystal Structure Of The Vaccinia Virus
Dual-Specificity Phosphatase Vh1
Length = 176
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 5 VEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDLLSH 64
V N+YLG+ +AM SS E K+V ++ + S++ HI + D + D+ +
Sbjct: 35 VTNNVYLGNYKNAMDAPSS-EVKFKYVLNLTMDKYTLPNSNINIIHIPLVDDTTTDISKY 93
Query: 65 FDSAYEFIRE-SQSEGAILVHCYHGVSRSATIVIAYLMKRD 104
FD F+ + Q +LVH GV+RS +++AYLM ++
Sbjct: 94 FDDVTAFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSKN 134
>pdb|2J17|A Chain A, Ptyr Bound Form Of Sdp-1
pdb|2J17|B Chain B, Ptyr Bound Form Of Sdp-1
Length = 182
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 40/56 (71%)
Query: 81 ILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARDVISPNEGFMHQLALYQ 136
IL+H G+SRSAT++IAY+MK +L ++ ++D +KS D I+P+ G + QL ++
Sbjct: 120 ILIHSQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWE 175
>pdb|2J16|A Chain A, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 40/56 (71%)
Query: 81 ILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARDVISPNEGFMHQLALYQ 136
IL+H G+SRSAT++IAY+MK +L ++ ++D +KS D I+P+ G + QL ++
Sbjct: 120 ILIHXQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWE 175
>pdb|2P4D|A Chain A, Structure-Assisted Discovery Of Variola Major H1
Phosphatase Inhibitors
Length = 172
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 5 VEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDLLSH 64
V N+YLG+ +A SS E K+V ++ S++ HI + D + D+ +
Sbjct: 31 VTNNVYLGNYKNAXNAPSS-EVKFKYVLNLTXDKYTLPNSNINIIHIPLVDDTTTDISKY 89
Query: 65 FDSAYEFIRE-SQSEGAILVHCYHGVSRSATIVIAYLMKRD 104
FD F+ + Q +LVHC GV+RS ++AYL ++
Sbjct: 90 FDDVTAFLSKCDQRNEPVLVHCVAGVNRSGAXILAYLXSKN 130
>pdb|2Q05|A Chain A, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|B Chain B, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|C Chain C, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|D Chain D, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
Length = 195
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 5 VEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDLLSH 64
V N+YLG+ +A SS E K+V ++ S++ HI + D + D+ +
Sbjct: 52 VTNNVYLGNYKNAXDAPSS-EVKFKYVLNLTXDKYTLPNSNINIIHIPLVDDTTTDISKY 110
Query: 65 FDSAYEFIRE-SQSEGAILVHCYHGVSRSATIVIAYLMKRD 104
FD F+ + Q +LVHC GV+RS ++AYL ++
Sbjct: 111 FDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAXILAYLXSKN 151
>pdb|3EMU|A Chain A, Crystal Structure Of A Leucine Rich Repeat And Phosphatase
Domain Containing Protein From Entamoeba Histolytica
Length = 161
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGI-FPTLGKISSLTYRHIEVADLPSED 60
P + + ++LG +A + + NI + +GI P+L K R D+ SE+
Sbjct: 10 PTQIIQYIHLGSFLNAHNVDYIHNNNISSILLVGIEVPSLFKDQCDILR----LDIVSEE 65
Query: 61 LLSHFDS---AYEFI-RESQSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVK 116
+DS A +FI R Q + +L+ GV+++ IVIA+LM L AF++V+
Sbjct: 66 GHQLYDSIPNAIKFIIRSIQRKEGVLIISGTGVNKAPAIVIAFLMYYQRLSFINAFNKVQ 125
Query: 117 SARDVISPNEGFMHQLALYQR 137
+I GF+ QL L+++
Sbjct: 126 GLYPLIDIESGFILQLKLFEK 146
>pdb|1YN9|A Chain A, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|B Chain B, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|C Chain C, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
Length = 169
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 44 SSLTYRHIEV--ADLPSEDLLSHF-DSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYL 100
+ L Y+ I+V LP E ++ F D+ EF + + VHC HG++R+ +V YL
Sbjct: 77 AGLLYKKIQVPGQTLPPESIVQEFIDTVKEFTEKCPGM-LVGVHCTHGINRTGYMVCRYL 135
Query: 101 MKRDDLGVQTAFDRVKSAR 119
M + Q A DR + AR
Sbjct: 136 MHTLGIAPQEAIDRFEKAR 154
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 7/72 (9%)
Query: 50 HIEVAD--LPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRDDLG 107
HI + D +PS+ S F + +++ S+ EG LVHC G+ R+ TI+ +YL+ + L
Sbjct: 64 HIPIPDGGVPSD---SQFLTIMKWLL-SEKEGN-LVHCVGGIGRTGTILASYLILTEGLE 118
Query: 108 VQTAFDRVKSAR 119
V++A D V+ R
Sbjct: 119 VESAIDEVRLVR 130
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 77 SEGAILVHCYHGVSRSATIVIAYLMK--RDDLGVQTAFDRVKSARDVISPNEGFM 129
+EGAI VHC G+ R+ T++ Y+MK R A+ R+ VI P + F+
Sbjct: 268 AEGAIAVHCKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQQFL 322
>pdb|2DXP|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphopeptides
A-(P)y-R
pdb|2I6O|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Phosphopeptides
N-g-(p)y-k-n
pdb|2I6P|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Pnpp
Length = 161
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Query: 50 HIEVAD--LPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRDDLG 107
HI + D +PS+ S F + +++ S+ EG LVH G+ R+ TI+ +YL+ + L
Sbjct: 64 HIPIPDGGVPSD---SQFLTIMKWLL-SEKEGN-LVHSVGGIGRTGTILASYLILTEGLE 118
Query: 108 VQTAFDRVKSAR 119
V++A D V+ R
Sbjct: 119 VESAIDEVRLVR 130
>pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1
Length = 157
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 51 IEVADLPSEDLLSHFDSAYEFIRESQSEG-AILVHCYHGVSRSATIVIAYLMKRDDLGVQ 109
+ D+ L++ +F + Q+ G + VHC G SRSAT+V AYL++ + +
Sbjct: 61 LSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHCKAGRSRSATMVAAYLIQVHNWSPE 120
Query: 110 TAFDRVKSARDVIS 123
A + + R IS
Sbjct: 121 EAIEAIAKIRSHIS 134
>pdb|1I9S|A Chain A, Crystal Structure Of The Rna Triphosphatase Domain Of
Mouse Mrna Capping Enzyme
Length = 210
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 30/66 (45%)
Query: 54 ADLPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFD 113
+ P+ + F E E I VHC HG +R+ ++ A+L+++ D ++ A
Sbjct: 95 GECPTTENTETFIRLCERFNERSPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVA 154
Query: 114 RVKSAR 119
AR
Sbjct: 155 TFAQAR 160
>pdb|1OHE|A Chain A, Structure Of Cdc14b Phosphatase With A Peptide Ligand
Length = 348
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 77 SEGAILVHCYHGVSRSATIVIAYLMK--RDDLGVQTAFDRVKSARDVISPNEGFM 129
+EGAI VH G+ R+ T++ Y+MK R A+ R+ VI P + F+
Sbjct: 268 AEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQQFL 322
>pdb|2C46|A Chain A, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|B Chain B, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|C Chain C, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|D Chain D, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
Length = 241
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 30/66 (45%)
Query: 54 ADLPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFD 113
+ P+ + F E E I VHC HG +R+ ++ A+L+++ D ++ A
Sbjct: 117 GECPTTENTETFIRLCERFNERNPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVA 176
Query: 114 RVKSAR 119
AR
Sbjct: 177 TFAQAR 182
>pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate
pdb|4ERC|B Chain B, Structure Of Vhz Bound To Metavanadate
Length = 150
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 45 SLTYRHIEVADL--PSEDLLSHFDSAYEFIRESQSEG-AILVHCYHGVSRSATIVIAYLM 101
LT + + D P+ D + F + + E+ + G A+ VHC G R+ T++ YL+
Sbjct: 55 GLTLHRLRIPDFCPPAPDQIDRF---VQIVDEANARGEAVGVHCALGFGRTGTMLACYLV 111
Query: 102 KRDDLGVQTAFDRVKSAR 119
K L A ++ R
Sbjct: 112 KERGLAAGDAIAEIRRLR 129
>pdb|2IMG|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
23 From Homo Sapiens In Complex With Ligand Malate Ion
Length = 151
Score = 34.3 bits (77), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 45 SLTYRHIEVADL--PSEDLLSHFDSAYEFIRESQSEG-AILVHCYHGVSRSATIVIAYLM 101
LT + + D P+ D + F + + E+ + G A+ VHC G R+ T + YL+
Sbjct: 56 GLTLHRLRIPDFCPPAPDQIDRF---VQIVDEANARGEAVGVHCALGFGRTGTXLACYLV 112
Query: 102 KRDDLGVQTAFDRVKSAR 119
K L A ++ R
Sbjct: 113 KERGLAAGDAIAEIRRLR 130
>pdb|3RGQ|A Chain A, Crystal Structure Of Ptpmt1 In Complex With Pi(5)p
Length = 156
Score = 33.9 bits (76), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 51 IEVADLPSEDLLSHFDSAYEFIRESQSEG-AILVHCYHGVSRSATIVIAYLMKRDDLGVQ 109
+ D+ L++ +F + Q+ G + VH G SRSAT+V AYL++ + +
Sbjct: 62 LSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHSKAGRSRSATMVAAYLIQVHNWSPE 121
Query: 110 TAFDRVKSARDVIS 123
A + + R IS
Sbjct: 122 EAIEAIAKIRSHIS 135
>pdb|3M4U|A Chain A, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
pdb|3M4U|B Chain B, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
Length = 306
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 63 SHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYL----MKRDDLGVQTAFDRVKSA 118
+ FD I+ + ILVHC G+ R+ T++ AY ++R L T + V +
Sbjct: 207 ASFDELLSVIKNCVTTSPILVHCSAGIGRTGTLIGAYAALLHIERGILTDSTVYSIVAAM 266
Query: 119 RDVISPNEGFMHQLALYQRMRMTL 142
+ G + +L Y + MT+
Sbjct: 267 KQ---KRFGMVQRLEQYAVIYMTV 287
>pdb|4GS0|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GS0|B Chain B, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
Length = 308
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Query: 48 YRHIEVAD--LPSE--DLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKR 103
Y+++ D +PSE +LS D + G I+VHC G+ R+ TI++ ++
Sbjct: 192 YQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDMLME 251
Query: 104 D--------DLGVQTAFDRVKSAR 119
+ D+ +Q V++ R
Sbjct: 252 NISTKGLDCDIDIQKTIQMVRAQR 275
>pdb|1GWZ|A Chain A, Crystal Structure Of The Catalytic Domain Of The Protein
Tyrosine Phosphatase Shp-1
Length = 299
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Query: 48 YRHIEVAD--LPSE--DLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKR 103
Y+++ D +PSE +LS D + G I+VHC G+ R+ TI++ ++
Sbjct: 170 YQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDMLME 229
Query: 104 D--------DLGVQTAFDRVKSAR 119
+ D+ +Q V++ R
Sbjct: 230 NISTKGLDCDIDIQKTIQMVRAQR 253
>pdb|1I9T|A Chain A, Crystal Structure Of The Oxidized Rna Triphosphatase
Domain Of Mouse Mrna Capping Enzyme
Length = 210
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 29/66 (43%)
Query: 54 ADLPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFD 113
+ P+ + F E E I VH HG +R+ ++ A+L+++ D ++ A
Sbjct: 95 GECPTTENTETFIRLCERFNERSPPELIGVHXTHGFNRTGFLICAFLVEKMDWSIEAAVA 154
Query: 114 RVKSAR 119
AR
Sbjct: 155 TFAQAR 160
>pdb|2B3O|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Shp-1
Length = 532
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
Query: 48 YRHIEVAD--LPSE--DLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKR 103
Y+++ D +PSE +LS D + G I+VHC G+ R+ TI++ ++
Sbjct: 412 YQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDMLME 471
Query: 104 D--------DLGVQTAFDRVKSARDVISPNE 126
+ D+ +Q V++ R + E
Sbjct: 472 NISTKGLDCDIDIQKTIQMVRAQRSGMVQTE 502
>pdb|2CFV|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Receptor Type J
Length = 316
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 58 SEDLLSHFDS-AYEFIRESQSEGAILVHCYHGVSRSATIV 96
+ DLL +F +++++S E ILVHC GV R+ T +
Sbjct: 216 TTDLLINFRYLVRDYMKQSPPESPILVHCSAGVGRTGTFI 255
>pdb|1YFO|A Chain A, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
pdb|1YFO|B Chain B, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
Length = 302
Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 76 QSEGAILVHCYHGVSRSATIVI 97
Q GAI+VHC GV R+ T V+
Sbjct: 223 QYAGAIVVHCSAGVGRTGTFVV 244
>pdb|1OPO|A Chain A, The Structure Of Carnation Mottle Virus
pdb|1OPO|B Chain B, The Structure Of Carnation Mottle Virus
pdb|1OPO|C Chain C, The Structure Of Carnation Mottle Virus
Length = 348
Score = 30.4 bits (67), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 49 RHIEVADLPSEDLLSHFDSAYEFIRESQSEGAILVH------CYHGVSRSATIV 96
+H+E A ++DL+ D FIR+S S+ A LV +G ++ T+V
Sbjct: 175 KHVETAAQTAKDLVIPVDGKTRFIRDSASDDAKLVDFGRIVLSTYGFDKADTVV 228
>pdb|3I36|A Chain A, Crystal Structure Of Rat Protein Tyrosine Phosphatase Eta
Catalytic Domain
Length = 342
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 58 SEDLLSHFDS-AYEFIRESQSEGAILVHCYHGVSRSATIV 96
+ DLL +F +++++ E ILVHC GV R+ T +
Sbjct: 216 TTDLLINFRYLVRDYMKQIPPESPILVHCSAGVGRTGTFI 255
>pdb|1FPR|A Chain A, Crystal Structure Of The Complex Formed Between The
Catalytic Domain Of Shp-1 And An In Vitro Peptide
Substrate Py469 Derived From Shps-1
Length = 284
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 12/84 (14%)
Query: 48 YRHIEVAD--LPSE--DLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKR 103
Y+++ D +PSE +LS D + G I+VH G+ R+ TI++ ++
Sbjct: 170 YQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDMLME 229
Query: 104 D--------DLGVQTAFDRVKSAR 119
+ D+ +Q V++ R
Sbjct: 230 NISTKGLDCDIDIQKTIQMVRAQR 253
>pdb|3AWE|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
pdb|3AWE|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
pdb|3AWE|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
Length = 334
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Query: 60 DLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSA 118
DLL D A ++ S + I +HC G R+ T+V ++L++ FD K A
Sbjct: 97 DLLKFIDDAKVWM-TSDPDHVIAIHCKGGKGRTGTLVSSWLLE------DGKFDTAKEA 148
>pdb|2KV1|A Chain A, Insights Into Function, Catalytic Mechanism And Fold
Evolution Of Mouse Selenoprotein Methionine Sulfoxide
Reductase B1 Through Structural Analysis
Length = 124
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 184 NRPNPNVYKCKKCRRVLFTLNNIFAHNRGVKFTWKCQEDGVPPSDSELCKEK 235
N P VY C KC LF+ ++ +AH+ W + + P C EK
Sbjct: 14 NHFEPGVYVCAKCSYELFSSHSKYAHSS----PWPAFTETIHPDSVTKCPEK 61
>pdb|4GRY|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GRZ|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Po4
Length = 288
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 12/84 (14%)
Query: 48 YRHIEVAD--LPSE--DLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKR 103
Y+++ D +PSE +LS D + G I+VH G+ R+ TI++ ++
Sbjct: 172 YQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDMLME 231
Query: 104 D--------DLGVQTAFDRVKSAR 119
+ D+ +Q V++ R
Sbjct: 232 NISTKGLDCDIDIQKTIQMVRAQR 255
>pdb|3AWG|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
Length = 334
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Query: 60 DLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSA 118
DLL D A ++ S + I +HC G R+ T+V ++L++ FD K A
Sbjct: 97 DLLKFIDDAKVWM-TSDPDHVIAIHCKAGKGRTGTLVSSWLLE------DGKFDTAKEA 148
>pdb|3AWF|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
pdb|3AWF|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
pdb|3AWF|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
Length = 346
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Query: 60 DLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSA 118
DLL D A ++ S + I +HC G R+ T+V ++L++ FD K A
Sbjct: 109 DLLKFIDDAKVWM-TSDPDHVIAIHCKGGKGRTGTLVSSWLLE------DGKFDTAKEA 160
>pdb|3V0I|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
256-576, E411f
Length = 324
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Query: 60 DLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSA 118
DLL D A ++ S + I +HC G R+ T+V ++L++ FD K A
Sbjct: 87 DLLKFIDDAKVWM-TSDPDHVIAIHCKGGKGRTGTLVSSWLLE------DGKFDTAKEA 138
>pdb|2V9M|A Chain A, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant A87m-T109f-E192a)
pdb|2V9M|B Chain B, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant A87m-T109f-E192a)
pdb|2V9O|A Chain A, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant A87m-T109f-E192a)
pdb|2V9O|E Chain E, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant A87m-T109f-E192a)
Length = 274
Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 56 LPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRD 104
+P+ +L +HF S E I+ + + +++HC+ + I + Y+++ D
Sbjct: 113 VPTSELPAHFLSHCERIKATNGKDRVIMHCH----ATNLIALTYVLEND 157
>pdb|1GT7|A Chain A, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
pdb|1GT7|B Chain B, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
pdb|1GT7|C Chain C, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
pdb|1GT7|D Chain D, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
pdb|1GT7|E Chain E, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
pdb|1GT7|F Chain F, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
pdb|1GT7|G Chain G, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
pdb|1GT7|H Chain H, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
pdb|1GT7|I Chain I, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
pdb|1GT7|J Chain J, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
pdb|1GT7|K Chain K, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
pdb|1GT7|L Chain L, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
pdb|1GT7|M Chain M, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
pdb|1GT7|N Chain N, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
pdb|1GT7|O Chain O, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
pdb|1GT7|P Chain P, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
pdb|1GT7|Q Chain Q, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
pdb|1GT7|R Chain R, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
pdb|1GT7|S Chain S, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
pdb|1GT7|T Chain T, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
Length = 274
Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 56 LPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRD 104
+P+ +L +HF S E I+ + + +++HC+ + I + Y+++ D
Sbjct: 113 VPTSELPAHFLSHCERIKATNGKDRVIMHCH----ATNLIALTYVLEND 157
>pdb|2UYU|A Chain A, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant A88f-E192a)
pdb|2UYU|E Chain E, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant A88f-E192a)
pdb|2V9N|A Chain A, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant A88f-E192a)
pdb|2V9N|B Chain B, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant A88f-E192a)
pdb|2V9N|C Chain C, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant A88f-E192a)
pdb|2V9N|D Chain D, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant A88f-E192a)
Length = 274
Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 56 LPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRD 104
+P+ +L +HF S E I+ + + +++HC+ + I + Y+++ D
Sbjct: 113 VPTSELPAHFLSHCERIKATNGKDRVIMHCH----ATNLIALTYVLEND 157
>pdb|2V9I|A Chain A, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant E192a-K248w-L274stop)
pdb|2V9I|B Chain B, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant E192a-K248w-L274stop)
Length = 273
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 56 LPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRD 104
+P+ +L +HF S E I+ + + +++HC+ + I + Y+++ D
Sbjct: 113 VPTSELPAHFLSHCERIKATNGKDRVIMHCH----ATNLIALTYVLEND 157
>pdb|1OJR|A Chain A, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
(Mutant E192a)
Length = 274
Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 56 LPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRD 104
+P+ +L +HF S E I+ + + +++HC+ + I + Y+++ D
Sbjct: 113 VPTSELPAHFLSHCERIKATNGKDRVIMHCH----ATNLIALTYVLEND 157
>pdb|2UYV|A Chain A, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant Q6y-E192a)
pdb|2UYV|B Chain B, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant Q6y-E192a)
pdb|2UYV|C Chain C, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant Q6y-E192a)
pdb|2UYV|D Chain D, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant Q6y-E192a)
pdb|2V9L|A Chain A, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant Q6y-E192a)
Length = 274
Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 56 LPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRD 104
+P+ +L +HF S E I+ + + +++HC+ + I + Y+++ D
Sbjct: 113 VPTSELPAHFLSHCERIKATNGKDRVIMHCH----ATNLIALTYVLEND 157
>pdb|2V9G|A Chain A, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant Q6y-L84w-E192a)
pdb|2V9G|B Chain B, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant Q6y-L84w-E192a)
pdb|2V9G|C Chain C, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant Q6y-L84w-E192a)
pdb|2V9G|D Chain D, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant Q6y-L84w-E192a)
Length = 274
Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 56 LPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRD 104
+P+ +L +HF S E I+ + + +++HC+ + I + Y+++ D
Sbjct: 113 VPTSELPAHFLSHCERIKATNGKDRVIMHCH----ATNLIALTYVLEND 157
>pdb|2V2A|A Chain A, L-rhamnulose-1-phosphate Aldolase From Escherichia Coli (
Mutant E192a-k248g-r253a-e254a)
Length = 274
Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 56 LPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRD 104
+P+ +L +HF S E I+ + + +++HC+ + I + Y+++ D
Sbjct: 113 VPTSELPAHFLSHCERIKATNGKDRVIMHCH----ATNLIALTYVLEND 157
>pdb|2V29|A Chain A, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
(Mutant K15w)
pdb|2V29|B Chain B, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli
(Mutant K15w)
Length = 274
Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 56 LPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRD 104
+P+ +L +HF S E I+ + + +++HC+ + I + Y+++ D
Sbjct: 113 VPTSELPAHFLSHCERIKATNGKDRVIMHCH----ATNLIALTYVLEND 157
>pdb|2V9E|A Chain A, L-rhamnulose-1-phosphate Aldolase From Escherichia Coli (
Mutant E192a-k248w-a273s)
pdb|2V9E|B Chain B, L-rhamnulose-1-phosphate Aldolase From Escherichia Coli (
Mutant E192a-k248w-a273s)
pdb|2V9F|A Chain A, L-Rhamnulose-1-Phosphate Aldolase From Escherichia Coli (
Mutant E192a-K248w-A273s)
Length = 274
Score = 28.1 bits (61), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 56 LPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRD 104
+P+ +L +HF S E I+ + + +++HC+ + I + Y+++ D
Sbjct: 113 VPTSELPAHFLSHCERIKATNGKDRVIMHCH----ATNLIALTYVLEND 157
>pdb|3QLI|A Chain A, Crystal Structure Of Ripa From Yersinia Pestis
pdb|3QLI|B Chain B, Crystal Structure Of Ripa From Yersinia Pestis
pdb|3QLK|A Chain A, Crystal Structure Of Ripa From Yersinia Pestis
pdb|3QLK|B Chain B, Crystal Structure Of Ripa From Yersinia Pestis
Length = 455
Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 40 LGKISSLTYRHIEVADLPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAY 99
+ ++ ++ H+ + ++P + + S I + +GA L GV +V
Sbjct: 196 ISEVDAIVENHVPLIEMPVRSAIPEYTSISHIIADLVPDGACL---QMGVGALPNLVCGV 252
Query: 100 LMKRDDLGVQT 110
L R+DLG+ T
Sbjct: 253 LKDRNDLGIHT 263
>pdb|4FMW|A Chain A, Crystal Structure Of Methyltransferase Domain Of Human Rna
(Guanine-9- ) Methyltransferase Domain Containing
Protein 2
pdb|4FMW|B Chain B, Crystal Structure Of Methyltransferase Domain Of Human Rna
(Guanine-9- ) Methyltransferase Domain Containing
Protein 2
Length = 197
Score = 27.3 bits (59), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 162 KDVRLVPSSYGELIKADPGLTSNRPNPNVYKCKKCRRVLFTLNNIFAHNRGVKFTWKCQE 221
KD+ + P Y ELIK + + +PN+ K + + + + HN T+K
Sbjct: 85 KDIHIKPEHYSELIKKEDLIYLTSDSPNILKELDESKA-YVIGGLVDHNHHKGLTYKQAS 143
Query: 222 D 222
D
Sbjct: 144 D 144
>pdb|3PS5|A Chain A, Crystal Structure Of The Full-Length Human Protein
Tyrosine Phosphatase Shp-1
Length = 595
Score = 27.3 bits (59), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 12/91 (13%)
Query: 48 YRHIEVAD--LPSE--DLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKR 103
Y+++ D +PSE +LS D + G I+VH G+ R+ TI++ ++
Sbjct: 412 YQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDMLME 471
Query: 104 D--------DLGVQTAFDRVKSARDVISPNE 126
+ D+ +Q V++ R + E
Sbjct: 472 NISTKGLDCDIDIQKTIQMVRAQRSGMVQTE 502
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,249,987
Number of Sequences: 62578
Number of extensions: 281667
Number of successful extensions: 697
Number of sequences better than 100.0: 74
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 625
Number of HSP's gapped (non-prelim): 75
length of query: 249
length of database: 14,973,337
effective HSP length: 96
effective length of query: 153
effective length of database: 8,965,849
effective search space: 1371774897
effective search space used: 1371774897
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)