RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy13471
(249 letters)
>gnl|CDD|238073 cd00127, DSPc, Dual specificity phosphatases (DSP); Ser/Thr and Tyr
protein phosphatases. Structurally similar to
tyrosine-specific phosphatases but with a shallower
active site cleft and a distinctive active site
signature motif, HCxxGxxR. Characterized as VHR- or
Cdc25-like.
Length = 139
Score = 142 bits (361), Expect = 3e-43
Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 1 MPNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGIF--PTLGKISSLTYRHIEVADLPS 58
+ + LYLG A + + I V ++ +S Y ++ + DLPS
Sbjct: 1 PLSEITPGLYLGSYPAASDKELLKKLGITHVLNVAKEVPNENLFLSDFNYLYVPILDLPS 60
Query: 59 EDLLSHFDSAYEFIRESQSE-GAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKS 117
+D+ +FD A +FI +++ + G +LVHC GVSRSAT+VIAYLMK L ++ A++ VKS
Sbjct: 61 QDISKYFDEAVDFIDDAREKGGKVLVHCLAGVSRSATLVIAYLMKTLGLSLREAYEFVKS 120
Query: 118 ARDVISPNEGFMHQLALYQ 136
R +ISPN GFM QL Y+
Sbjct: 121 RRPIISPNAGFMRQLKEYE 139
>gnl|CDD|214551 smart00195, DSPc, Dual specificity phosphatase, catalytic domain.
Length = 138
Score = 130 bits (329), Expect = 2e-38
Identities = 53/138 (38%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDL 61
P+ + +LYLG +DA+ L + I V ++ S TY + + D +
Sbjct: 1 PSEILPHLYLGSYSDALNLALLKKLGITHVINVTNEVPNYNGSDFTYLGVPIDDNTETKI 60
Query: 62 LSHFDSAYEFIRESQSEGA-ILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARD 120
+F A EFI +++S+G +LVHC GVSRSAT++IAYLMK ++ + A+D VK R
Sbjct: 61 SPYFPEAVEFIEDAESKGGKVLVHCQAGVSRSATLIIAYLMKTRNMSLNDAYDFVKDRRP 120
Query: 121 VISPNEGFMHQLALYQRM 138
+ISPN GF+ QL Y+R
Sbjct: 121 IISPNFGFLRQLIEYERK 138
>gnl|CDD|216117 pfam00782, DSPc, Dual specificity phosphatase, catalytic domain.
Ser/Thr and Tyr protein phosphatases. The enzyme's
tertiary fold is highly similar to that of
tyrosine-specific phosphatases, except for a
"recognition" region.
Length = 131
Score = 118 bits (297), Expect = 9e-34
Identities = 49/132 (37%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 9 LYLGDLNDAMGLKSSNEANIKFVFSIG-IFPTLGKISSLTYRHIEVADLPSEDLLSHFDS 67
LYLG A I V ++ P S + Y I V D ++ +
Sbjct: 1 LYLGSYPTASKAFLEKL-GITHVINVTREVPNSNLNSGILYLGIPVEDNHETNISKYLPE 59
Query: 68 AYEFIRESQSEGA-ILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARDVISPNE 126
A EFI ++ +G +LVHC G+SRSAT++IAYLMK +L + A+ VK R +ISPN
Sbjct: 60 AVEFIDDAIQKGGKVLVHCQAGISRSATLIIAYLMKTRNLSLNEAYSFVKERRPIISPNF 119
Query: 127 GFMHQLALYQRM 138
GF QL Y+R
Sbjct: 120 GFKRQLLEYERK 131
>gnl|CDD|225297 COG2453, CDC14, Predicted protein-tyrosine phosphatase [Signal
transduction mechanisms].
Length = 180
Score = 59.0 bits (143), Expect = 8e-11
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 50 HIEVADLPSEDLLSHFDSAYEFIRESQSEG-AILVHCYHGVSRSATIVIAYLMKRDDLGV 108
H+ + D DL D +FI E+ S+G ++VHC G+ RS T++ AYLM L +
Sbjct: 77 HLPILDGTVPDL-EDLDKIVDFIEEALSKGKKVVVHCQGGIGRSGTVIAAYLMLYGGLSL 135
Query: 109 QTAFDRVKSARDVISPNEGFMHQLALYQRMRM 140
VK R + L ++
Sbjct: 136 ADEAIAVKRRRRPG-AVVTEIQHLFELEQELF 166
>gnl|CDD|227653 COG5350, COG5350, Predicted protein tyrosine phosphatase [General
function prediction only].
Length = 172
Score = 46.0 bits (109), Expect = 3e-06
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 55 DLPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRS-ATIVIAYLMKRDDLGVQTAFD 113
P E +H + +F E +L+HCY G+SRS A +IA L D+ +
Sbjct: 73 IAPGE---AHVRAIIDFADEWPRFAPLLIHCYAGISRSTAAALIAALALAPDMDETELAE 129
Query: 114 RVKSARDVISPNEGFMHQLALYQRM 138
R+++ +PN +A+
Sbjct: 130 RLRALSPYATPNP---RLIAIADAA 151
>gnl|CDD|214649 smart00404, PTPc_motif, Protein tyrosine phosphatase, catalytic
domain motif.
Length = 105
Score = 42.3 bits (100), Expect = 1e-05
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 57 PSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRD 104
+ +L + + + +S+S G ++VHC GV R+ T V ++ +
Sbjct: 18 SPDSILELLRAVKKNLNQSESSGPVVVHCSAGVGRTGTFVAIDILLQQ 65
>gnl|CDD|214469 smart00012, PTPc_DSPc, Protein tyrosine phosphatase, catalytic
domain, undefined specificity. Protein tyrosine
phosphatases. Homologues detected by this profile and
not by those of "PTPc" or "DSPc" are predicted to be
protein phosphatases with a similar fold to DSPs and
PTPs, yet with unpredicted specificities.
Length = 105
Score = 42.3 bits (100), Expect = 1e-05
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 57 PSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRD 104
+ +L + + + +S+S G ++VHC GV R+ T V ++ +
Sbjct: 18 SPDSILELLRAVKKNLNQSESSGPVVVHCSAGVGRTGTFVAIDILLQQ 65
>gnl|CDD|183473 PRK12361, PRK12361, hypothetical protein; Provisional.
Length = 547
Score = 43.1 bits (102), Expect = 7e-05
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 24/148 (16%)
Query: 5 VEENLYLG------DLNDAMGLKSSNEANIKFVFSIGI-FPTLGKISSLTYRHIEVADLP 57
++ENLYLG DL LKS+ I + + F L SLT I+ ++P
Sbjct: 98 IDENLYLGCRLFPADLEK---LKSNK---ITAILDVTAEFDGLD--WSLTEEDIDYLNIP 149
Query: 58 SED----LLSHFDSAYEFIRESQSEG-AILVHCYHGVSRSATIVIAYLMKRD-DLGVQTA 111
D L+ + A +I +++VHC G RS ++ AYL+ +D DL V+
Sbjct: 150 ILDHSVPTLAQLNQAINWIHRQVRANKSVVVHCALGRGRSVLVLAAYLLCKDPDLTVEEV 209
Query: 112 FDRVKSARDVISPNEGFMHQLALYQRMR 139
++K R N+ QL ++M
Sbjct: 210 LQQIKQIRKTARLNK---RQLRALEKML 234
>gnl|CDD|215717 pfam00102, Y_phosphatase, Protein-tyrosine phosphatase.
Length = 233
Score = 40.0 bits (94), Expect = 5e-04
Identities = 21/91 (23%), Positives = 31/91 (34%), Gaps = 7/91 (7%)
Query: 20 LKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDLLSHFDSAYEFIRE----- 74
L E + G + T H P + S + IR+
Sbjct: 104 LVKEEEEEDDYTVRTFELKNGGSEETRTVTHFHYTGWPDHGVPESPKSLLDLIRKVRKSQ 163
Query: 75 -SQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
G I+VHC GV R+ T I I L+++
Sbjct: 164 ADPRSGPIVVHCSAGVGRTGTFIAIDILLQQ 194
>gnl|CDD|238006 cd00047, PTPc, Protein tyrosine phosphatases (PTP) catalyze the
dephosphorylation of phosphotyrosine peptides; they
regulate phosphotyrosine levels in signal transduction
pathways. The depth of the active site cleft renders the
enzyme specific for phosphorylated Tyr (pTyr) residues,
instead of pSer or pThr. This family has a distinctive
active site signature motif, HCSAGxGRxG. Characterized
as either transmembrane, receptor-like or
non-transmembrane (soluble) PTPs. Receptor-like PTP
domains tend to occur in two copies in the cytoplasmic
region of the transmembrane proteins, only one copy may
be active.
Length = 231
Score = 38.3 bits (90), Expect = 0.002
Identities = 28/104 (26%), Positives = 39/104 (37%), Gaps = 23/104 (22%)
Query: 45 SLTYRHIEVADLPSEDLLSHFDSAYEFIRE------SQSEGAILVHCYHGVSRSAT-IVI 97
+ T H + P + DS + +R+ G I+VHC GV R+ T I I
Sbjct: 127 TRTVTHFQYTGWPDHGVPESPDSLLDLLRKVRKSQQQPGSGPIVVHCSAGVGRTGTFIAI 186
Query: 98 AYLMKR-DDLGVQTAFDRVKSARDVISPNEGFMHQLALYQRMRM 140
L++R + GV F VK R QR M
Sbjct: 187 DILLQRLEAEGVVDIFQTVKELRS---------------QRPGM 215
>gnl|CDD|214550 smart00194, PTPc, Protein tyrosine phosphatase, catalytic domain.
Length = 259
Score = 37.6 bits (88), Expect = 0.003
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 63 SHFDSAYEFIRE-----SQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
+S + IR S S G I+VHC GV R+ T I I L+++
Sbjct: 174 ESPESILDLIRAVRKSQSTSTGPIVVHCSAGVGRTGTFIAIDILLQQ 220
>gnl|CDD|178908 PRK00162, glpE, thiosulfate sulfurtransferase; Validated.
Length = 108
Score = 35.4 bits (82), Expect = 0.005
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 11/53 (20%)
Query: 66 DSAYEFIRESQSEGAILVHCYHGV-SRSATIVIAYLMKRDDLGVQTAFDRVKS 117
DS F+R++ + ++V CYHG S+ A YL +Q FD V S
Sbjct: 46 DSLGAFMRQADFDTPVMVMCYHGNSSQGAA---QYL-------LQQGFDVVYS 88
>gnl|CDD|165774 PLN00209, PLN00209, ribosomal protein S27; Provisional.
Length = 86
Score = 29.4 bits (66), Expect = 0.41
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 8/39 (20%)
Query: 186 PNPNVY----KCKKCRRVLFTLNNIFAHNRGVKFTWKCQ 220
+PN + KC+ C F + +F+H++ V CQ
Sbjct: 28 QSPNSFFMDVKCQGC----FNITTVFSHSQTVVVCGSCQ 62
>gnl|CDD|227886 COG5599, PTP2, Protein tyrosine phosphatase [Signal transduction
mechanisms].
Length = 302
Score = 31.0 bits (70), Expect = 0.54
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Query: 79 GAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARDVISPNEGFMHQLALY-QR 137
G I+VHC GV R+ T + ++ R D + +D+I F L+L QR
Sbjct: 219 GPIIVHCSAGVGRTGTFIALDILLRMPNDTLNHTDTWEDTQDLI-----FQIVLSLRSQR 273
Query: 138 MRMTLDLNFTPYK 150
M+M N T +K
Sbjct: 274 MKMV--QNKTQFK 284
>gnl|CDD|234262 TIGR03567, FMN_reduc_SsuE, FMN reductase, SsuE family. Members
of this protein family use NAD(P)H to reduce FMN and
regenerate FMNH2. Members include the homodimeric,
NAD(P)H-dependent enzyme SsuE from Escherichia coli,
which serves as a partner to an FMNH2-dependent
alkanesulfonate monooxygenase. It is induced by sulfate
starvation. The NADH-dependent enzyme MsuE from
Pseudomonas aeruginosa is outside the scope of this
model (see model TIGR03566) [Central intermediary
metabolism, Sulfur metabolism].
Length = 171
Score = 28.4 bits (64), Expect = 2.3
Identities = 12/20 (60%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Query: 49 RHIEVADLPSEDLL-SHFDS 67
H+ V DLP+EDLL + FDS
Sbjct: 34 DHLSVRDLPAEDLLFARFDS 53
>gnl|CDD|238721 cd01444, GlpE_ST, GlpE sulfurtransferase (ST) and homologs are
members of the Rhodanese Homology Domain superfamily.
Unlike other rhodanese sulfurtransferases, GlpE is a
single domain protein but indications are that it
functions as a dimer. The active site contains a
catalytically active cysteine.
Length = 96
Score = 27.6 bits (62), Expect = 2.5
Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 8/55 (14%)
Query: 49 RHIEVADLPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKR 103
HI A ED L + + R ++V+CYHG S+ + L +
Sbjct: 33 DHIPGAIHLDEDSLDDWLGDLDRDRP------VVVYCYHGN--SSAQLAQALREA 79
>gnl|CDD|221160 pfam11658, DUF3260, Protein of unknown function (DUF3260). Some
members in this family of proteins are annotated as YhjU
however this cannot be confirmed. Currently this family
has no known function.
Length = 516
Score = 28.8 bits (65), Expect = 3.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 43 ISSLTYRHIEVADLPSEDLLSHFD 66
I SL++ +E A L + LLS FD
Sbjct: 201 ICSLSWDDLEAAGLRNHPLLSRFD 224
>gnl|CDD|238538 cd01118, ArsB_permease, Anion permease ArsB. These permeases have
been shown to export arsenate and antimonite in
eubacteria and archaea. A typical ArsB permease
contains 8-13 transmembrane helices and can function
either independently as a chemiosmotic transporter or as
a channel-forming subunit of an ATP-driven anion pump
(ArsAB). The ArsAB complex is similar in many ways to
ATP-binding cassette transporters, which have two groups
of six transmembrane-spanning helical segments and two
nucleotide-binding domains. The ArsB proteins belong to
the ArsB/NhaD superfamily of permeases that translocate
sodium, arsenate, sulfate, and organic anions across
biological membranes in all three kingdoms of life.
Length = 416
Score = 28.4 bits (64), Expect = 3.9
Identities = 13/41 (31%), Positives = 15/41 (36%)
Query: 89 VSRSATIVIAYLMKRDDLGVQTAFDRVKSARDVISPNEGFM 129
VS AT V+ YL R L + VK I F
Sbjct: 183 VSILATYVVLYLFFRRALPKRLETASVKKPSLAIKDPLLFG 223
>gnl|CDD|224165 COG1244, COG1244, Predicted Fe-S oxidoreductase [General function
prediction only].
Length = 358
Score = 28.1 bits (63), Expect = 4.1
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 55 DLPSEDLLSHFDSAYEFIRESQSEGAI 81
+ E+L++ FD AY E +
Sbjct: 78 PVSEENLINQFDEAYSKYEGKFDEFVV 104
>gnl|CDD|218186 pfam04636, PA26, PA26 p53-induced protein (sestrin). PA26 is a
p53-inducible protein. Its function is unknown. It has
similarity to pfam04636 in its N-terminus.
Length = 450
Score = 28.1 bits (63), Expect = 4.2
Identities = 19/70 (27%), Positives = 26/70 (37%)
Query: 6 EENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDLLSHF 65
E + L +L A+ L + A FVF GI P + S T V + D L+
Sbjct: 147 EASWSLAELVHAVVLLAHFHALSSFVFGCGIEPEVDLEESHTLSPPSVLTQCTCDFLNGN 206
Query: 66 DSAYEFIRES 75
D S
Sbjct: 207 DIDNSEAVMS 216
>gnl|CDD|217192 pfam02703, Adeno_E1A, Early E1A protein. This is a family of
adenovirus early E1A proteins. The E1A protein is 32 kDa
it can however be cleaved to yield the 28 kDa protein.
The E1A protein is responsible for the transcriptional
activation of the early genes with in the viral genome
at the start of the infection process as well as some
cellular genes.
Length = 264
Score = 27.8 bits (62), Expect = 4.8
Identities = 9/13 (69%), Positives = 10/13 (76%)
Query: 218 KCQEDGVPPSDSE 230
C E+G PPSDSE
Sbjct: 111 LCYEEGFPPSDSE 123
>gnl|CDD|216030 pfam00623, RNA_pol_Rpb1_2, RNA polymerase Rpb1, domain 2. RNA
polymerases catalyze the DNA dependent polymerisation of
RNA. Prokaryotes contain a single RNA polymerase
compared to three in eukaryotes (not including
mitochondrial. and chloroplast polymerases). This
domain, domain 2, contains the active site. The
invariant motif -NADFDGD- binds the active site
magnesium ion.
Length = 165
Score = 27.2 bits (61), Expect = 5.5
Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 117 SARDVISPN-EGFMHQLALYQRMRMTLDLNFTPYKLYKLKRLSQIVKDVRLVPSSYG 172
S R VI+P+ + ++ + M + L P + KL ++ K V P+
Sbjct: 7 SGRSVITPDPNLKLDEVGVPIEMALEL---TKPEIVTKLNIK-KLRKLVSNGPNVPP 59
>gnl|CDD|132411 TIGR03368, cellulose_yhjU, cellulose synthase operon protein YhjU.
This protein was identified by the partial phylogenetic
profiling algorithm (PMID:16930487) as part of the
system for cellulose biosynthesis in bacteria, and in
fact is found in cellulose biosynthesis gene regions.
The protein was designated YhjU in Salmonella
enteritidis, where disruption of its gene disrupts
cellulose biosynthesis and biofilm formation
(PMID:11929533) [Cell envelope, Biosynthesis and
degradation of surface polysaccharides and
lipopolysaccharides].
Length = 518
Score = 28.1 bits (63), Expect = 5.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 43 ISSLTYRHIEVADLPSEDLLSHFD 66
I SL++ +E A L + LLS FD
Sbjct: 201 ICSLSWDDLEAAGLRNHPLLSRFD 224
>gnl|CDD|225222 COG2345, COG2345, Predicted transcriptional regulator
[Transcription].
Length = 218
Score = 27.7 bits (62), Expect = 5.8
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 148 PYKLYKLKRLSQIVKDVRLVPSSYGELIKA 177
P KLY+L K P YGEL A
Sbjct: 67 PAKLYRLTE-----KGREQFPKRYGELALA 91
>gnl|CDD|163652 cd07409, MPP_CD73_N, CD73 ecto-5'-nucleotidase and related
proteins, N-terminal metallophosphatase domain. CD73
is a mammalian ecto-5'-nucleotidase expressed in
endothelial cells and lymphocytes that catalyzes the
conversion of 5'-AMP to adenosine in the final step of
a pathway that generates adenosine from ATP. This
pathway also includes a CD39 nucleoside triphosphate
dephosphorylase that mediates the dephosphorylation of
ATP to ADP and then to 5'-AMP. These enzymes all have
an N-terminal metallophosphatase domain and a
C-terminal 5'nucleotidase domain. The N-terminal
metallophosphatase domain belongs to a large
superfamily of distantly related metallophosphatases
(MPPs) that includes: Mre11/SbcD-like exonucleases,
Dbr1-like RNA lariat debranching enzymes, YfcE-like
phosphodiesterases, purple acid phosphatases (PAPs),
YbbF-like UDP-2,3-diacylglucosamine hydrolases, and
acid sphingomyelinases (ASMases). MPPs are
functionally diverse, but all share a conserved domain
with an active site consisting of two metal ions
(usually manganese, iron, or zinc) coordinated with
octahedral geometry by a cage of histidine, aspartate,
and asparagine residues. The conserved domain is a
double beta-sheet sandwich with a di-metal active site
made up of residues located at the C-terminal side of
the sheets. This domain is thought to allow for
productive metal coordination.
Length = 281
Score = 27.5 bits (62), Expect = 7.3
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 60 DLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIV 96
D S F+ E + A CY G +R AT+V
Sbjct: 8 DHHSRFE---ETNPSGGVKDAATEKCYGGFARVATLV 41
>gnl|CDD|224473 COG1556, COG1556, Uncharacterized conserved protein [Function
unknown].
Length = 218
Score = 27.0 bits (60), Expect = 7.9
Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Query: 43 ISSLTYRHIEVA--DLPSEDLLSHFDSAYEFIRESQSEGA--ILVHCYHGVSRSATIVI 97
+ L R E+ L +++ E Q+E A + +G++ + TIV+
Sbjct: 78 LIPLDLRLEELGITALLDQNVEVVVWDEIEDENIEQAEQADVGITGAEYGIAETGTIVL 136
>gnl|CDD|225240 COG2365, COG2365, Protein tyrosine/serine phosphatase [Signal
transduction mechanisms].
Length = 249
Score = 27.0 bits (60), Expect = 9.9
Identities = 10/61 (16%), Positives = 17/61 (27%), Gaps = 2/61 (3%)
Query: 76 QSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKS--ARDVISPNEGFMHQLA 133
G +L+HC G R+ + Y A D + + +
Sbjct: 134 AENGPVLIHCTAGKDRTGLVAALYRKLVGGSDETVAADYLLTNRYGEPERRGILEYVSEK 193
Query: 134 L 134
L
Sbjct: 194 L 194
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.322 0.138 0.410
Gapped
Lambda K H
0.267 0.0824 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 12,677,948
Number of extensions: 1181839
Number of successful extensions: 939
Number of sequences better than 10.0: 1
Number of HSP's gapped: 935
Number of HSP's successfully gapped: 34
Length of query: 249
Length of database: 10,937,602
Length adjustment: 94
Effective length of query: 155
Effective length of database: 6,768,326
Effective search space: 1049090530
Effective search space used: 1049090530
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (25.9 bits)