RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy13471
(249 letters)
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES;
1.50A {Homo sapiens}
Length = 165
Score = 164 bits (418), Expect = 1e-51
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDL 61
N + LY+G+ DA + ++ + + S+ + + Y I AD PS++L
Sbjct: 7 MNKILPGLYIGNFKDARDAEQLSKNKVTHILSVHDSARP-MLEGVKYLCIPAADSPSQNL 65
Query: 62 LSHFDSAYEFIRES-QSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARD 120
HF + +FI E + LVHC GVSRS T+VIAY+M D G + A V++ R
Sbjct: 66 TRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRS 125
Query: 121 VISPNEGFMHQLALYQRMRM 140
+PN GF QL +++ +
Sbjct: 126 CANPNVGFQRQLQEFEKHEV 145
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI,
protein structure INI NEW YORK SGX research center for
structural genomics; 2.00A {Mus musculus}
Length = 164
Score = 164 bits (418), Expect = 1e-51
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDL 61
V L++G+ A + A I ++ + + + V D P+EDL
Sbjct: 12 FARVAPALFIGNARAAGATELLVRAGITLCVNVSRQQPGPRAPGVAELRVPVFDDPAEDL 71
Query: 62 LSHFDSAYEFIRES-QSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARD 120
L+H + + + + G+ LV+C +G SRSA + AYLM+ + AF VKSAR
Sbjct: 72 LTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRHRGHSLDRAFQMVKSARP 131
Query: 121 VISPNEGFMHQLALYQRM 138
V PN GF QL Y++
Sbjct: 132 VAEPNLGFWAQLQKYEQT 149
>3emu_A Leucine rich repeat and phosphatase domain containing protein;
structural genomics, hydrolase, PSI-2, protein structure
initiative; 2.30A {Entamoeba histolytica}
Length = 161
Score = 163 bits (414), Expect = 5e-51
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 1/152 (0%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDL 61
P + + ++LG +A + + NI + +GI +++ L
Sbjct: 10 PTQIIQYIHLGSFLNAHNVDYIHNNNISSILLVGIEVPSLFKDQCDILRLDIVSEEGHQL 69
Query: 62 LSHFDSAYEFIRES-QSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARD 120
+A +FI S Q + +L+ GV+++ IVIA+LM L AF++V+
Sbjct: 70 YDSIPNAIKFIIRSIQRKEGVLIISGTGVNKAPAIVIAFLMYYQRLSFINAFNKVQGLYP 129
Query: 121 VISPNEGFMHQLALYQRMRMTLDLNFTPYKLY 152
+I GF+ QL L+++ ++ + +
Sbjct: 130 LIDIESGFILQLKLFEKKLEKMNSEGHHHHHH 161
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase;
2.70A {Homo sapiens}
Length = 211
Score = 164 bits (417), Expect = 5e-51
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 13/207 (6%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDL 61
P + LYLG A + +I + ++ + ++ L Y+ I V D + D+
Sbjct: 6 PVEILPFLYLGSAYHASKCEFLANLHITALLNVSRRTSEACMTHLHYKWIPVEDSHTADI 65
Query: 62 LSHFDSAYEFIRES-QSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARD 120
SHF A +FI + G +LVH G+SRS TI +AYLMK ++ AFD +K R
Sbjct: 66 SSHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRS 125
Query: 121 VISPNEGFMHQLALYQRM-----------RMTLDLNFTPYKLYKLKRLSQIVKDVRLVPS 169
++SPN GFM QL Y+ + + + + P+
Sbjct: 126 MVSPNFGFMGQLLQYESEILPSTPNPQPPSCQGEAAGSSLIGHLQTLSPDMQGAYCTFPA 185
Query: 170 SYGELIKADPGLTSNRPNPNVYKCKKC 196
S + ++ +P V C
Sbjct: 186 SVLAPVPTHSTVSELSRSP-VATATSC 211
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine
phosphatase, hydrolase; 1.26A {Homo sapiens}
Length = 144
Score = 161 bits (411), Expect = 7e-51
Identities = 49/138 (35%), Positives = 76/138 (55%), Gaps = 1/138 (0%)
Query: 3 NLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDLL 62
+++ L LG + A L + + + + ++ +S TY+ I + DLP ++L
Sbjct: 5 GVIKPWLLLGSQDAAHDLDTLKKNKVTHILNVAYGVENAFLSDFTYKSISILDLPETNIL 64
Query: 63 SHFDSAYEFIRES-QSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARDV 121
S+F +EFI E+ + +G +LVH GVSR+A IVI +LM + +AF VK+AR
Sbjct: 65 SYFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPS 124
Query: 122 ISPNEGFMHQLALYQRMR 139
I PN GFM QL YQ +
Sbjct: 125 ICPNSGFMEQLRTYQEGK 142
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase;
HET: BOG; 2.40A {Homo sapiens}
Length = 160
Score = 162 bits (412), Expect = 9e-51
Identities = 47/138 (34%), Positives = 63/138 (45%), Gaps = 2/138 (1%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDL 61
V LYLG+ DA L I + SI P + +TY I VAD P +
Sbjct: 8 MTKVLPGLYLGNFIDAKDLDQLGRNKITHIISIHESPQP-LLQDITYLRIPVADTPEVPI 66
Query: 62 LSHFDSAYEFIRES-QSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARD 120
HF FI + G LVH + G+SRS TIV AY+M LG + + +K+ R
Sbjct: 67 KKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKATRP 126
Query: 121 VISPNEGFMHQLALYQRM 138
+ +PN GF QL +
Sbjct: 127 IANPNPGFRQQLEEFGWA 144
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure,
hydrolase; HET: EPE; 2.00A {Homo sapiens}
Length = 188
Score = 163 bits (414), Expect = 1e-50
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDL 61
+ + ++LY+ + A + I V ++ + + Y + VAD P+ L
Sbjct: 20 LSQITKSLYISNGVAANNKLMLSSNQITMVINVSVEVVNTLYEDIQYMQVPVADSPNSRL 79
Query: 62 LSHFDSAYEFIRES-QSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARD 120
FD + I +G L+HC GVSRSA + +AYLMK + + A KS R
Sbjct: 80 CDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMSLLDAHTWTKSCRP 139
Query: 121 VISPNEGFMHQLALYQRM 138
+I PN GF QL Y+
Sbjct: 140 IIRPNSGFWEQLIHYEFQ 157
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase;
2.10A {Homo sapiens}
Length = 145
Score = 160 bits (408), Expect = 2e-50
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDL 61
P + E+++LG +A L+ ++++ ++ Y +I V D + DL
Sbjct: 4 PTQIFEHVFLGSEWNASNLEDLQNRGVRYILNVTREIDNFFPGVFEYHNIRVYDEEATDL 63
Query: 62 LSHFDSAYEFIRES-QSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARD 120
L++++ Y+FI ++ + LVH GVSRSA+ VIAY MK + A+D VK R
Sbjct: 64 LAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKEYGWNLDRAYDYVKERRT 123
Query: 121 VISPNEGFMHQLALYQRM 138
V PN FM QL YQ +
Sbjct: 124 VTKPNPSFMRQLEEYQGI 141
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase,
structural genomics, PSI-2, protein structure
initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Length = 155
Score = 159 bits (405), Expect = 7e-50
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 9/142 (6%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGI-----FPTLGKISSLTYRHIEVADL 56
P + NLYLG D+ L+S + I+++ ++ F G Y+ I ++D
Sbjct: 6 PVQILPNLYLGSARDSANLESLAKLGIRYILNVTPNLPNFFEKNGDF---HYKQIPISDH 62
Query: 57 PSEDLLSHFDSAYEFIRES-QSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRV 115
S++L F A EFI E+ +LVH GVSRS T+ +AYLM++ L + A+D V
Sbjct: 63 WSQNLSRFFPEAIEFIDEALSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSLNDAYDLV 122
Query: 116 KSARDVISPNEGFMHQLALYQR 137
K + ISPN FM QL ++R
Sbjct: 123 KRKKSNISPNFNFMGQLLDFER 144
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A
{Homo sapiens}
Length = 149
Score = 158 bits (402), Expect = 2e-49
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 3/139 (2%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSI--GIFPTLGKISSLTYRHIEVADLPSE 59
+ L+LG+ DA L + NI +V ++ + + Y+ + D +
Sbjct: 4 LTPILPFLFLGNEQDAQDLDTMQRLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNKQ 63
Query: 60 DLLSHFDSAYEFIRES-QSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSA 118
+L +F+ A+EFI E+ Q +L+HC GVSRSATIVIAYLMK + + A+ VK
Sbjct: 64 NLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGK 123
Query: 119 RDVISPNEGFMHQLALYQR 137
R +ISPN FM QL ++
Sbjct: 124 RPIISPNLNFMGQLLEFEE 142
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded
B-sheet, hydrolase; 2.80A {Homo sapiens}
Length = 177
Score = 158 bits (402), Expect = 4e-49
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSI--GIFPTLGKISSLTYRHIEVADLPSE 59
+ L+LG+ DA L + NI +V ++ + + Y+ + D +
Sbjct: 8 LTPILPFLFLGNEQDAQDLDTMQRLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNKQ 67
Query: 60 DLLSHFDSAYEFIRES-QSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSA 118
+L +F+ A+EFI E+ Q +L+HC GVSRSATIVIAYLMK + + A+ VK
Sbjct: 68 NLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGK 127
Query: 119 RDVISPNEGFMHQLALYQRM 138
R +ISPN FM QL ++
Sbjct: 128 RPIISPNLNFMGQLLEFEED 147
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase,
nucleus; 2.90A {Homo sapiens} PDB: 1m3g_A
Length = 144
Score = 157 bits (399), Expect = 4e-49
Identities = 45/138 (32%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDL 61
P + LYLG A + I + ++ Y+ I V D D+
Sbjct: 4 PVEILPFLYLGSAYHAARRDMLDALGITALLNVSSDCPNHFEGHYQYKCIPVEDNHKADI 63
Query: 62 LSHFDSAYEFIRES-QSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARD 120
S F A E+I G +LVH G+SRSATI +AYLM + + ++ AF+ VK R
Sbjct: 64 SSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRS 123
Query: 121 VISPNEGFMHQLALYQRM 138
+ISPN FM QL ++
Sbjct: 124 IISPNFSFMGQLLQFESQ 141
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase,
dual specifici phosphatase; 1.88A {Homo sapiens}
Length = 190
Score = 159 bits (403), Expect = 5e-49
Identities = 46/138 (33%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDL 61
+ +L+LG + A I + + I Y + +AD+P +
Sbjct: 26 IAQITSSLFLGRGSVASNRHLLQARGITCIVNATIEIPNFNWPQFEYVKVPLADMPHAPI 85
Query: 62 LSHFDSAYEFIRES-QSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARD 120
+FD+ + I + GA LVHC GVSRSAT+ IAYLMK ++ + A++ VK+ R
Sbjct: 86 GLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMKFHNVCLLEAYNWVKARRP 145
Query: 121 VISPNEGFMHQLALYQRM 138
VI PN GF QL Y+R
Sbjct: 146 VIRPNVGFWRQLIDYERQ 163
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein,
structural genomics, NPPSFA, project on protein
structural and functional analyses; 1.67A {Homo sapiens}
Length = 151
Score = 156 bits (396), Expect = 2e-48
Identities = 53/143 (37%), Positives = 69/143 (48%), Gaps = 8/143 (5%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIG-----IFPTLGKISSLTYRHIEVADL 56
+ V LYLGD + A + I V + P + + Y +E D
Sbjct: 2 ADEVWPGLYLGDQDMANNRRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDS 61
Query: 57 PSEDLLSHFDSAYEFIRE--SQSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDR 114
P+ D+ HF +A +FI SQ G ILVHC GVSRSAT+V+AYLM L + A +
Sbjct: 62 PAFDMSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHLTLVEAIKK 121
Query: 115 VKSARDVISPNEGFMHQLALYQR 137
VK R I PN GF+ QL R
Sbjct: 122 VKDHRG-IIPNRGFLRQLLALDR 143
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics,
phosphatase, PSI-2, protein structure initiative; 1.60A
{Homo sapiens}
Length = 154
Score = 155 bits (395), Expect = 2e-48
Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 3 NLVEENLYLGDLNDAMG--LKSSNEANIKFVFSIG-----IFPTLGKISSLTYRHIEVAD 55
+ L+LG + AM L + I + I F Y +++AD
Sbjct: 7 QEILPGLFLGPYSSAMKSKLPVLQKHGITHIICIRQNIEANFIKPNFQQLFRYLVLDIAD 66
Query: 56 LPSEDLLSHFDSAYEFIRES-QSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDR 114
P E+++ F EFI S Q G +LVH G+SRSA VIAY+M+ + + AF
Sbjct: 67 NPVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRSAAFVIAYIMETFGMKYRDAFAY 126
Query: 115 VKSARDVISPNEGFMHQLALYQRM 138
V+ R I+PN GF+HQL Y+ +
Sbjct: 127 VQERRFCINPNAGFVHQLQEYEAI 150
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Length = 219
Score = 157 bits (400), Expect = 2e-48
Identities = 48/146 (32%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFV-------FSIGIFPTLGKISSLTYRHIEVA 54
N V LY+GD A+ +A V +++ P + + Y +E
Sbjct: 54 VNEVWPKLYIGDEATALDRYRLQKAGFTHVLNAAHGRWNVDTGPDYYRDMDIQYHGVEAD 113
Query: 55 DLPSEDLLSHFDSAYEFIRE--SQSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAF 112
DLP+ DL F A FI S ILVHC G SRSAT+V+AYLM D+ + A
Sbjct: 114 DLPTFDLSVFFYPAAAFIDRALSDDHSKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAI 173
Query: 113 DRVKSARDVISPNEGFMHQLALYQRM 138
+V R + PN GF+ QL +
Sbjct: 174 QQVAKNRC-VLPNRGFLKQLRELDKQ 198
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein
dual-specificity phosphatase, inhibitor; HET: STT; 1.90A
{Homo sapiens} PDB: 1vhr_A* 1j4x_A*
Length = 183
Score = 153 bits (389), Expect = 5e-47
Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFV---------FSIGIFPTLGKISSLTYRHIE 52
N V +Y+G+ + A + + I V + K S +TY I+
Sbjct: 28 CNEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIK 87
Query: 53 VADLPSEDLLSHFDSAYEFIRES--QSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQT 110
D +L ++F+ A +FI ++ Q G +LVHC G SRS T+VIAYLM R + V++
Sbjct: 88 ANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKS 147
Query: 111 AFDRVKSARDVISPNEGFMHQLALYQRM 138
A V+ R+ I PN+GF+ QL
Sbjct: 148 ALSIVRQNRE-IGPNDGFLAQLCQLNDR 174
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual
specificity phosphatase, DUSP13, testis and skeletal
muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Length = 205
Score = 152 bits (387), Expect = 2e-46
Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIG-------IFPTLGKISSLTYRHIEVA 54
+ V +L+LGD A + I V + + SL Y IE
Sbjct: 46 IDEVWPSLFLGDAYAARDKSKLIQLGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEAD 105
Query: 55 DLPSEDLLSHFDSAYEFIRE--SQSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAF 112
D P DL +F +IR S +G +LVHC GVSRSAT+V+A+LM +++ + A
Sbjct: 106 DNPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMIYENMTLVEAI 165
Query: 113 DRVKSARDVISPNEGFMHQLALYQRM 138
V++ R+ I PN GF+ QL +
Sbjct: 166 QTVQAHRN-ICPNSGFLRQLQVLDNR 190
>3cm3_A Late protein H1, dual specificity protein phosphatase;
dual-specificity phosphatase, VH1, hydrolase; 1.32A
{Vaccinia virus} PDB: 2rf6_A 2p4d_A
Length = 176
Score = 148 bits (376), Expect = 3e-45
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 7/143 (4%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDL 61
V N+YLG+ +AM SS E K+V ++ + S++ HI + D + D+
Sbjct: 32 MTRVTNNVYLGNYKNAMDAPSS-EVKFKYVLNLTMDKYTLPNSNINIIHIPLVDDTTTDI 90
Query: 62 LSHFDSAYEFIRES-QSEGAILVHCYHGVSRSATIVIAYLMKR-----DDLGVQTAFDRV 115
+FD F+ + Q +LVH GV+RS +++AYLM + L + +
Sbjct: 91 SKYFDDVTAFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSKNKESLPMLYFLYVYHSM 150
Query: 116 KSARDVISPNEGFMHQLALYQRM 138
+ R N F Q+ +
Sbjct: 151 RDLRGAFVENPSFKRQIIEKYVI 173
>2q05_A Late protein H1, dual specificity protein phosphatase; structural
genomics, APC7320, P protein structure initiative; HET:
MSE; 2.57A {Vaccinia virus WR}
Length = 195
Score = 148 bits (375), Expect = 8e-45
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 7/137 (5%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDL 61
V N+YLG+ +AM SS E K+V ++ + S++ HI + D + D+
Sbjct: 49 MTRVTNNVYLGNYKNAMDAPSS-EVKFKYVLNLTMDKYTLPNSNINIIHIPLVDDTTTDI 107
Query: 62 LSHFDSAYEFIRES-QSEGAILVHCYHGVSRSATIVIAYLMKR-----DDLGVQTAFDRV 115
+FD F+ + Q +LVHC GV+RS +++AYLM + L + +
Sbjct: 108 SKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAMILAYLMSKNKESLPMLYFLYVYHSM 167
Query: 116 KSARDVISPNEGFMHQL 132
+ R N F Q+
Sbjct: 168 RDLRGAFVENPSFKRQI 184
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol
phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus
musculus} PDB: 3rgq_A*
Length = 157
Score = 140 bits (354), Expect = 3e-42
Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 11/147 (7%)
Query: 3 NLVEENLYLGDL-NDAMGLKSSNEANIKFV---------FSIGIFPTLGKISSLTYRHIE 52
+ ++ + LG L M + + N++ V + K + + +
Sbjct: 3 HRIDHTVLLGALPLKNMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLRLS 62
Query: 53 VADLPSEDLLSHFDSAYEFIRESQSEG-AILVHCYHGVSRSATIVIAYLMKRDDLGVQTA 111
D+ L++ +F + Q+ G + VHC G SRSAT+V AYL++ + + A
Sbjct: 63 TVDMTGVPTLANLHKGVQFALKYQALGQCVYVHCKAGRSRSATMVAAYLIQVHNWSPEEA 122
Query: 112 FDRVKSARDVISPNEGFMHQLALYQRM 138
+ + R IS + L + +
Sbjct: 123 IEAIAKIRSHISIRPSQLEVLKEFHKE 149
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase,
hypothetical protein; 2.7A {Saccharomyces cerevisiae}
PDB: 2j17_A* 2j16_B
Length = 182
Score = 136 bits (343), Expect = 3e-40
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 7/139 (5%)
Query: 2 PNLV-EENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSED 60
P LV E +YL V ++ ++ +
Sbjct: 44 PLLVLPEKIYLYSEPTVK-----ELLPFDVVINVAEEANDLRMQVPAVEYHHYRWEHDSQ 98
Query: 61 LLSHFDSAYEFIRES-QSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSAR 119
+ S I + IL+H G+SRSAT++IAY+MK +L ++ ++D +KS
Sbjct: 99 IALDLPSLTSIIHAATTKREKILIHAQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRA 158
Query: 120 DVISPNEGFMHQLALYQRM 138
D I+P+ G + QL ++
Sbjct: 159 DKINPSIGLIFQLMEWEVA 177
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity
phosphatase, carbohydrate BIND hydrolase; 2.40A
{Arabidopsis thaliana}
Length = 294
Score = 95.2 bits (236), Expect = 2e-23
Identities = 23/164 (14%), Positives = 50/164 (30%), Gaps = 17/164 (10%)
Query: 3 NLVEENLYLGD-LNDAMGLKSSNEANIKFVFSI--------------GIFPTLGKISSLT 47
N + +L +G L + + +K +F + I K S +
Sbjct: 14 NFIRPDLIVGSCLQTPEDVDKLRKIGVKTIFCLQQDPDLEYFGVDISSIQAYAKKYSDIQ 73
Query: 48 YRHIEVADLPSEDLLSHFDSAYEFIRE--SQSEGAILVHCYHGVSRSATIVIAYLMKRDD 105
+ E+ D + DL + + + ++ G VH G+ R+ + + Y+
Sbjct: 74 HIRCEIRDFDAFDLRMRLPAVVGTLYKAVKRNGGVTYVHSTAGMGRAPAVALTYMFWVQG 133
Query: 106 LGVQTAFDRVKSARDVISPNEGFMHQLALYQRMRMTLDLNFTPY 149
+ A + S R + + + T
Sbjct: 134 YKLMEAHKLLMSKRSCFPKLDAIRNATIDILTGLKRKTVTLTLK 177
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual
specicity protein phosphatase 23, DUS23_human, malate,
structural genomics, PSI; 1.93A {Homo sapiens}
Length = 151
Score = 72.4 bits (178), Expect = 3e-16
Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 9/121 (7%)
Query: 25 EANIKFVFSI--GIFPTLGKISSLTYRHIEVADL--PSEDLLSHFDSAYEFIRESQSEG- 79
+ ++ + S+ P LT + + D P+ D + F + + E+ + G
Sbjct: 34 DLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFCPPAPDQIDRF---VQIVDEANARGE 90
Query: 80 AILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARDVISPNEGFMHQLA-LYQRM 138
A+ VHC G R+ T++ YL+K L A ++ R + YQR
Sbjct: 91 AVGVHCALGFGRTGTMLACYLVKERGLAAGDAIAEIRRLRPGSIETYEQEKAVFQFYQRT 150
Query: 139 R 139
+
Sbjct: 151 K 151
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle,
hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1
c.45.1.1 PDB: 1ohc_A 1ohd_A
Length = 348
Score = 68.1 bits (166), Expect = 1e-13
Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 6/101 (5%)
Query: 44 SSLTYRHIEVADLPSEDLLS-HFDSAYEFIRES-QSEGAILVHCYHGVSRSATIVIAYLM 101
T + DL D + EF+ +EGAI VH G+ R+ T++ Y+M
Sbjct: 233 KRFTDAGFDHHDLFFADGSTPTDAIVKEFLDICENAEGAIAVHSKAGLGRTGTLIACYIM 292
Query: 102 KRDDLGVQTAFDRVKSAR--DVISPNEGFMHQLALYQRMRM 140
K + V+ R VI P + F+ + +
Sbjct: 293 KHYRMTAAETIAWVRICRPGSVIGPQQQFLVM--KQTNLWL 331
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA
processing, multifunctional enzyme,
nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A
1i9t_A
Length = 241
Score = 58.6 bits (141), Expect = 2e-10
Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 10/113 (8%)
Query: 44 SSLTYRHIEVADL--------PSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATI 95
+ + I+ L P+ + F E E I VHC HG +R+ +
Sbjct: 99 NDIEKEGIKYIKLQCKGHGECPTTENTETFIRLCERFNERNPPELIGVHCTHGFNRTGFL 158
Query: 96 VIAYLMKRDDLGVQTAFDRVKSARDVISPNEGFMHQLALYQRMRMTLDLNFTP 148
+ A+L+++ D ++ A AR ++ L++R + P
Sbjct: 159 ICAFLVEKMDWSIEAAVATFAQARPPGIYKGDYLK--ELFRRYGDIEEAPPPP 209
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine
phosphatase, P-loop, hydrolase; HET: PO4; 1.50A
{Autographa californicanucleopolyhedrovirus}
Length = 169
Score = 56.1 bits (135), Expect = 4e-10
Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 7/96 (7%)
Query: 44 SSLTYRHIEVADL-------PSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIV 96
+ + P E ++ F + E + VHC HG++R+ +V
Sbjct: 72 VHFLRAGLLYKKIQVPGQTLPPESIVQEFIDTVKEFTEKCPGMLVGVHCTHGINRTGYMV 131
Query: 97 IAYLMKRDDLGVQTAFDRVKSARDVISPNEGFMHQL 132
YLM + Q A DR + AR + ++ L
Sbjct: 132 CRYLMHTLGIAPQEAIDRFEKARGHKIERQNYVQDL 167
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP
domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB:
2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Length = 161
Score = 54.1 bits (130), Expect = 2e-09
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 43 ISSLTYRHIEVADLPSEDLLS-HFDSAYEFIRESQSEG-AILVHCYHGVSRSATIVIAYL 100
+S L ++ +P D ++ SE LVHC G+ R+ TI+ +YL
Sbjct: 52 LSILKKNGLQPLHIPIPDGGVPSDSQFLTIMKWLLSEKEGNLVHCVGGIGRTGTILASYL 111
Query: 101 MKRDDLGVQTAFDRVKSARD--VISPN-EGFMHQLALYQRMRM 140
+ + L V++A D V+ R V + E F+ ++ ++ +
Sbjct: 112 ILTEGLEVESAIDEVRLVRPGAVQTYEQEMFLLRVEGMRKSWL 154
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics,
medical structural genomics of pathogen protozoa, MSGPP,
unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Length = 167
Score = 51.9 bits (124), Expect = 1e-08
Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 13/102 (12%)
Query: 46 LTYRHIEVAD--LPSEDLLSHFDSAYEFIRESQSE------GAILVHCYHGVSRSATIVI 97
+ D P+ +L + + Q E I VHC G+ R+ +V
Sbjct: 69 IDVHSWPFDDGAPPTRAVLDSWLKLLDTELARQQEDPSVPPPTIGVHCVAGLGRAPILVA 128
Query: 98 AYLMKRDDLGVQTAFDRVKSAR--DVISPNEGFMHQLALYQR 137
L++ ++ A ++ R + ++ + Y+R
Sbjct: 129 LALVEYGNVSALDAIALIREKRKGAINQTQMHWITK---YKR 167
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine
phosphatase IVA1...; structural genomics, NYSGXRC,
unknown function, PSI; 1.90A {Homo sapiens} SCOP:
c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Length = 159
Score = 46.2 bits (109), Expect = 1e-06
Identities = 19/105 (18%), Positives = 39/105 (37%), Gaps = 10/105 (9%)
Query: 44 SSLTYRHIEVADL-------PSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIV 96
+ + I V D PS ++ + S + + I VHC G+ R+ +V
Sbjct: 55 TLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLV 114
Query: 97 IAYLMKRDDLGVQTAFDRVKSARD--VISPNEGFMHQLALYQRMR 139
L++ + + A ++ R S ++ + R+R
Sbjct: 115 ALALIEG-GMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLR 158
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual
specific phosphatase, COMP with peptide, hydrolase;
2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Length = 189
Score = 45.9 bits (108), Expect = 2e-06
Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 5/107 (4%)
Query: 37 FPTLGKISSLTYRHIEVAD--LPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSAT 94
TL + + D PS ++ + S + + I VHC G+ R+
Sbjct: 74 DTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPV 133
Query: 95 IVIAYLMKRDDLGVQTAFDRVKSARD--VISPNEGFMHQLALYQRMR 139
+V L++ + + A ++ R S ++ + R+R
Sbjct: 134 LVALALIEG-GMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLR 179
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein
tyrosine phosphatase, inositol phosphate, I phosphatase;
HET: IHP; 1.60A {Selenomonas ruminantium} PDB: 1u24_A
1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A
3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Length = 314
Score = 46.3 bits (109), Expect = 3e-06
Identities = 19/139 (13%), Positives = 49/139 (35%), Gaps = 14/139 (10%)
Query: 46 LTYRHIEVAD--LPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLM-K 102
+ Y I D P+ + + D F R + + H GV R+ ++ M K
Sbjct: 182 MRYFRIAATDHVWPTPE---NIDRFLAFYRTLPQDAWLHFHSEAGVGRTTAFMVMTDMLK 238
Query: 103 RDDLGVQTAFDRVKSARDVISPNEGFMHQLALYQRMRMTLDLNFTPYKLYKLKRLSQIVK 162
+ ++ R + + + + + + + K+ +++ + V+
Sbjct: 239 NPSVSLKDILYRQHEIGGF------YYGEFPIKTKDKDSWKTKYYREKIVMIEQFYRYVQ 292
Query: 163 DVRL--VPSSYGELIKADP 179
+ R + + +K+ P
Sbjct: 293 ENRADGYQTPWSVWLKSHP 311
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol
phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Length = 629
Score = 46.7 bits (110), Expect = 3e-06
Identities = 18/95 (18%), Positives = 29/95 (30%), Gaps = 6/95 (6%)
Query: 46 LTYRHIEVAD--LPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSAT-IVIAYLMK 102
L Y I D PS D F R + + HC G R+ + + +MK
Sbjct: 499 LHYYRIAATDHIWPSAAN---IDEFINFTRTMPANAWLHFHCQAGAGRTTAYMAMYDMMK 555
Query: 103 RDDLGVQTAFDRVKSARDVISPNEGFMHQLALYQR 137
D+ + R E + ++
Sbjct: 556 NPDVSLGDILSRQYLLGGNYVAYEIAKPKPDQWKA 590
Score = 45.2 bits (106), Expect = 1e-05
Identities = 16/112 (14%), Positives = 38/112 (33%), Gaps = 11/112 (9%)
Query: 45 SLTYRHIEVAD--LPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMK 102
Y + + D P + D EF + + + HCY G+ R+ ++ + +
Sbjct: 200 GANYFRLTLQDHFRPDDP---DVDKFLEFYKSLPKDAWLHYHCYAGMGRTTIFMVMHDIL 256
Query: 103 RDDLGVQTAFDRVKSARDVISPNEGFMHQ-----LALYQRMRMTLDLNFTPY 149
++ V + D ++ + + + + R +F Y
Sbjct: 257 KNAKDV-SFDDIIQRQKLIGIVDLSEIPDKKKNYGRKAYIERYQFVQHFYDY 307
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich,
hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB:
1fq1_A*
Length = 212
Score = 44.7 bits (105), Expect = 6e-06
Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 6/78 (7%)
Query: 49 RHIEVADLPSEDL----LSHFDSAYEFIRESQSEG-AILVHCYHGVSRSATIVIAYLMK- 102
I P D ++ E + L+H Y G+ RS + L+
Sbjct: 99 CGIITHHHPIADGGTPDIASCCEIMEELTTCLKNYRKTLIHSYGGLGRSCLVAACLLLYL 158
Query: 103 RDDLGVQTAFDRVKSARD 120
D + + A D ++ R
Sbjct: 159 SDTISPEQAIDSLRDLRG 176
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol,
hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1
c.45.1.1
Length = 324
Score = 39.1 bits (90), Expect = 8e-04
Identities = 15/69 (21%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Query: 57 PSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRDDL-GVQTAFDRV 115
P +L+ F + +HC G R+ ++ AYL+ R Q A D
Sbjct: 90 PQLELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEALDFY 149
Query: 116 KSARDVISP 124
R
Sbjct: 150 GEVRTRDKK 158
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint
center for structural genomics, JCSG; HET: MSE; 1.40A
{Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Length = 157
Score = 36.1 bits (83), Expect = 0.003
Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 6/59 (10%)
Query: 46 LTYRHIEV-ADLPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKR 103
+ Y +I V P + + F +A + +LVHC R++ Y +K+
Sbjct: 68 MDYVYIPVDWQNPKVEDVEAFFAAMD----QHKGKDVLVHCLAN-YRASAFAYLYQLKQ 121
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 37.1 bits (85), Expect = 0.004
Identities = 31/231 (13%), Positives = 68/231 (29%), Gaps = 60/231 (25%)
Query: 18 MGLKSSNEANIKFVF-SIGIFPTLGKISSLTYRHIEV--ADLPSED---LLSHFDSAYEF 71
L A + +F + +FP I ++ + + D+ D +++ Y
Sbjct: 361 SSLNVLEPAEYRKMFDRLSVFPPSAHIPTIL---LSLIWFDVIKSDVMVVVNKLHK-YSL 416
Query: 72 IRESQSEGAILVHCYHGVSRSATIVIAYLMKRDDLGV--QTAFDRVKSAR-----DVISP 124
+ + E I + +I + +K ++ ++ D + D+I P
Sbjct: 417 VEKQPKESTISIP---------SIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPP 467
Query: 125 NE--------GF-MHQLALYQRM----RMTLDLNFTPYKL-------YKLKRLSQIVKDV 164
G + + +RM + LD F K+ + ++ +
Sbjct: 468 YLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQL 527
Query: 165 RLVPSSYGELI-KADPGLT---------SNRPNPNVYKCKKCRRVLFTLNN 205
+ Y I DP + N+ K + L
Sbjct: 528 KF----YKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMA 574
Score = 34.8 bits (79), Expect = 0.026
Identities = 34/243 (13%), Positives = 62/243 (25%), Gaps = 84/243 (34%)
Query: 9 LYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDLLSHFDSA 68
L L ++ +A + F++ L LT R +V D S +H
Sbjct: 248 LVLLNVQNAKAWNA---------FNLSC-KIL-----LTTRFKQVTDFLSAATTTHI--- 289
Query: 69 YEFIRESQSEGAILVHCYHGVSR--SATIVIAYL-MKRDDLGVQTAFDRVKSARDVISPN 125
L H ++ ++++ YL + DL + +P
Sbjct: 290 ------------SLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE--------VLT-TNP- 327
Query: 126 EGFMHQL--ALYQRMRMTLDLNFTPYKLYKLKRLSQIVKDVRLVPSSYGELIKADPGLTS 183
+ + T D +K +L+ I++ SS L
Sbjct: 328 --RRLSIIAESIRDGLATWD----NWKHVNCDKLTTIIE------SSLNVL--------- 366
Query: 184 NRPNPNVYKCKKCRRVLFTLNNIFAHNRGVKFT-------WKCQEDGVPPSDSELCKEKI 236
P Y +K L +F W +
Sbjct: 367 ---EPAEY--RKMFDRLS----VF--PPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS 415
Query: 237 FIE 239
+E
Sbjct: 416 LVE 418
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2
domain, hydrolase; 2.20A {Bos taurus}
Length = 361
Score = 36.5 bits (83), Expect = 0.006
Identities = 14/83 (16%), Positives = 25/83 (30%), Gaps = 1/83 (1%)
Query: 57 PSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRDDL-GVQTAFDRV 115
PS L + +VHC G + S+ +V A + + A +
Sbjct: 94 PSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFCNLYSTPGPAVRLL 153
Query: 116 KSARDVISPNEGFMHQLALYQRM 138
+ R I + L +
Sbjct: 154 YAKRPGIGLSPSHRRYLGYMCDL 176
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG
for eukaryotic structural genomics, phosphoprote
phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1
PDB: 2q47_A
Length = 151
Score = 35.5 bits (81), Expect = 0.006
Identities = 13/118 (11%), Positives = 36/118 (30%), Gaps = 9/118 (7%)
Query: 4 LVEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLG------KISSLTYRHIEVADLP 57
+V+ ++ D+ ++ + + P K + + +
Sbjct: 10 MVDNGIFRSGFPDSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRLFQFGIEGNK 69
Query: 58 SEDLLSHFDSAYEFIRE--SQSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFD 113
+ ++ + +L+HC G R+ ++ L K + + FD
Sbjct: 70 EPFVNIPDHKIRMALKVLLDEKNHPVLIHCKRGKHRTGC-LVGCLRKLQKWCLTSIFD 126
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4;
1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A*
3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Length = 339
Score = 36.2 bits (82), Expect = 0.007
Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Query: 50 HIEVADLPSEDLLSHF-DSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRDDL-G 107
I+ ++P+ L F D A ++ + I +H G R+ T+V ++L++
Sbjct: 91 MIDDHNVPTLVDLLKFIDDAKVWMTSDP-DHVIAIHSKGGKGRTGTLVSSWLLEDGKFDT 149
Query: 108 VQTAFDRVKSARDVISPNEGFMHQLALYQRM 138
+ A + S R + F Q
Sbjct: 150 AKEALEYFGSRRTDFEVGDVFQGVETASQIR 180
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 36.6 bits (84), Expect = 0.008
Identities = 41/260 (15%), Positives = 76/260 (29%), Gaps = 94/260 (36%)
Query: 20 LKSSNEANIKFVFSIGI-----FPTLG---KISSLTYRHIE--------VADLPSEDLLS 63
S +A I +F IG+ +P I + + E +++L E +
Sbjct: 293 FVSVRKA-ITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQD 351
Query: 64 HFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARD-VI 122
+ + ++ S + + I+ L V A++ V+
Sbjct: 352 Y-------VNKTNSH----------LPAGKQVEIS-------L--------VNGAKNLVV 379
Query: 123 SPNEGFMHQL-ALYQRMR-----MTLDLNFTPYKLYKLKRLSQIVKDVRLVP------SS 170
S G L L +R LD + P+ +R ++ R +P S
Sbjct: 380 S---GPPQSLYGLNLTLRKAKAPSGLDQSRIPFS----ER--KLKFSNRFLPVASPFHSH 430
Query: 171 YGELIKADPGLTSNRPNPNV-YKCKKCRR-VLFTLNNIFAHNRGVKFTWK--CQEDG-VP 225
L+ A + + NV + K + V T F G +
Sbjct: 431 L--LVPASDLINKDLVKNNVSFNAKDIQIPVYDT------------FDGSDLRVLSGSIS 476
Query: 226 PSDSELCKEKIFIEPLVWMK 245
+ I P+ W
Sbjct: 477 ER---IVDC-IIRLPVKWET 492
Score = 35.0 bits (80), Expect = 0.021
Identities = 34/236 (14%), Positives = 78/236 (33%), Gaps = 85/236 (36%)
Query: 40 LGKISSLTYRHIEVADLPSED-----LLSHFDSAYEFIRESQSEGAILVHCYHGVSRSAT 94
LG +SSL +E + + D L+ F++ ++ + +H
Sbjct: 65 LGYVSSL----VEPSKVGQFDQVLNLCLTEFENC--YLEGND------IHA--------- 103
Query: 95 IVIAYLMKRDDLGVQTAFDRVKS---ARDVISPNEGFMHQLALYQRMR------MTLDLN 145
+ A L++ +D + + +K+ AR + AL++ + + +
Sbjct: 104 -LAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAI--- 159
Query: 146 F------TPY-----KLYKL-------------KRLSQIVKDVRLVPSSYGE---LIK-- 176
F Y LY+ + LS++++ + + +++
Sbjct: 160 FGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWL 219
Query: 177 ADPGLTSNRPNPNVYKCKKCRRVLFTLNNI----FAHNRGVKFTWKCQEDGVPPSD 228
+P SN P+ + Y + + I AH + + G P +
Sbjct: 220 ENP---SNTPDKD-YLL----SIPISCPLIGVIQLAH-----YVVTAKLLGFTPGE 262
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment);
PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma,
D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Length = 627
Score = 35.9 bits (83), Expect = 0.012
Identities = 9/52 (17%), Positives = 17/52 (32%), Gaps = 7/52 (13%)
Query: 55 DLPSEDLLSHFDSAYEFIRESQS--EGAILVHCYHGVSRSAT-IVIAYLMKR 103
D P I+E +G +VH +G + + L ++
Sbjct: 498 DAPISSTF-EL---INVIKEEALTRDGPTIVHDEYGAVSAGMLCALTTLSQQ 545
Score = 32.4 bits (74), Expect = 0.15
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 70 EFIRE-----SQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
F+R G +LVHC GV R+ T IVI ++++
Sbjct: 215 TFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQ 254
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane,
phosphoprotein, consorti structural, glycoprotein, SGC,
PTPRE, membrane genomics; 3.20A {Homo sapiens}
Length = 599
Score = 34.3 bits (79), Expect = 0.035
Identities = 10/36 (27%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 72 IRESQSE---GAILVHCYHGVSRSAT-IVIAYLMKR 103
+++ Q + I VHC G R+ T I ++ +++R
Sbjct: 509 VQKQQQQTGNHPITVHCSAGAGRTGTFIALSNILER 544
Score = 31.2 bits (71), Expect = 0.36
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 70 EFIRE-----SQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
+F+++ G I+VHC GV R+ T IVI +M
Sbjct: 210 KFLKKVKTLNPVHAGPIVVHCSAGVGRTGTFIVIDAMMAM 249
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A
{Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A
2nv5_A
Length = 575
Score = 34.2 bits (79), Expect = 0.036
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 73 RESQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
+ +G I VHC GV R+ I ++ +++R
Sbjct: 495 EQFGQDGPITVHCSAGVGRTGVFITLSIVLER 526
Score = 30.4 bits (69), Expect = 0.53
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
Query: 70 EFIRE-----SQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
F+R G ++VHC GV R+ IVI +++R
Sbjct: 196 AFLRRVKACNPLDAGPMVVHCSAGVGRTGCFIVIDAMLER 235
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase,
phosphate ION, colorectal cancer alternative splicing,
coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP:
c.45.1.2
Length = 315
Score = 33.4 bits (77), Expect = 0.056
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 72 IRESQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
+R G I+ HC G+ RS T I I ++
Sbjct: 233 MRHIHRSGPIITHCSAGIGRSGTLICIDVVLGL 265
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine
phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Length = 306
Score = 32.7 bits (75), Expect = 0.099
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 72 IRESQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
I+ + ILVHC G+ R+ T I +
Sbjct: 216 IKNCVTTSPILVHCSAGIGRTGTLIGAYAALLH 248
>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine
methyltransferase; structural genomics, target 6426D,
PSI; 1.90A {Streptococcus mutans} PDB: 3l7s_A 3l7r_A
3t0c_A
Length = 755
Score = 32.1 bits (73), Expect = 0.15
Identities = 5/36 (13%), Positives = 11/36 (30%), Gaps = 1/36 (2%)
Query: 53 VADLPSEDLLSHFDSAYEFIRESQSEGAILVHCYHG 88
V D + L + Y + + + + Y
Sbjct: 206 VTDEGKDYL-QAAKAVYAYFAKEVPDAKFIFQTYFE 240
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase,
RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR;
2.90A {Homo sapiens} PDB: 1ygu_A*
Length = 610
Score = 32.0 bits (73), Expect = 0.17
Identities = 5/32 (15%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 73 RESQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
+ +L+HC G ++ + L++
Sbjct: 534 NKHHKSTPLLIHCRDGSQQTGIFCALLNLLES 565
Score = 30.9 bits (70), Expect = 0.43
Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 6/47 (12%)
Query: 63 SHFDSAYEFIRE-----SQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
+ R + G I+VH GV R+ T I I +++
Sbjct: 203 EDPHLLLKLRRRVNAFSNFFSGPIVVHSSAGVGRTGTYIGIDAMLEG 249
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine
methyltransferase; methionine, synthase,
methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis
thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A
1u22_A*
Length = 765
Score = 31.3 bits (71), Expect = 0.31
Identities = 14/57 (24%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Query: 53 VADLPSEDLLSHFDSAYEFIRESQSEGAILVHCYHG-VSRSATIVIAYLMKRDDLGV 108
V DL + L F AY + + S +LV Y + A + L G
Sbjct: 211 VMDLEGQKL-QAFTGAYAELESTLSGLNVLVETYFADIPAEAYKTLTSLKGVTAFGF 266
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal
transduction, glycoprotein, phosphorylation, signal;
2.25A {Mus musculus} SCOP: c.45.1.2
Length = 302
Score = 30.7 bits (70), Expect = 0.36
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Query: 63 SHFDSAYEFIRE-----SQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
+F+++ Q GAI+VHC GV R+ T +VI ++
Sbjct: 205 FTPIGMLKFLKKVKACNPQYAGAIVVHCSAGVGRTGTFVVIDAMLDM 251
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11,
tyrosine phosphatase, structural genomics, STR genomics
consortium, SGC, deafness; 1.60A {Homo sapiens} PDB:
3jrl_A* 3mow_A* 3o5x_A*
Length = 316
Score = 30.8 bits (70), Expect = 0.40
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 9/60 (15%)
Query: 63 SHFDSAYEFIRE-------SQSEGAILVHCYHGVSRSAT-IVIAYLMKR-DDLGVQTAFD 113
S +F+ E G ++VHC G+ R+ T IVI L+ + GV D
Sbjct: 217 SDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDID 276
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2
protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2
d.93.1.1 d.93.1.1
Length = 525
Score = 31.0 bits (70), Expect = 0.40
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 9/60 (15%)
Query: 63 SHFDSAYEFIRE-------SQSEGAILVHCYHGVSRSAT-IVIAYLMKR-DDLGVQTAFD 113
S +F+ E G ++VHC G+ R+ T IVI L+ + GV D
Sbjct: 430 SDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDID 489
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase,
substrate specificity, residue shift, signaling protein;
HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB:
1gwz_A
Length = 284
Score = 30.7 bits (70), Expect = 0.41
Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 9/60 (15%)
Query: 63 SHFDSAYEFIRE-------SQSEGAILVHCYHGVSRSAT-IVIAYLMKR-DDLGVQTAFD 113
S F+ + G I+VH G+ R+ T IVI LM+ G+ D
Sbjct: 182 SEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDID 241
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol
metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB:
1gn0_A
Length = 108
Score = 29.1 bits (66), Expect = 0.45
Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 14/55 (25%)
Query: 49 RHIEVADLPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKR 103
H+ L F+R++ + ++V CYHG S YL+++
Sbjct: 41 FHLTNDTLG------------AFMRDNDFDTPVMVMCYHGN-SSK-GAAQYLLQQ 81
>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine
phosphatase, glepp1, PTPU2, structural genom structural
genomics consortium, SGC; 2.15A {Homo sapiens} PDB:
2g59_A 2pi7_A
Length = 295
Score = 30.3 bits (69), Expect = 0.46
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 6/40 (15%)
Query: 70 EFIRE-----SQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
+F+ ++S+G +++HC GV R+ T I + L++
Sbjct: 203 QFVHMVRQQATKSKGPMIIHCSAGVGRTGTFIALDRLLQH 242
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU
genomics, structural genomics consortium, SGC,
hydrolase; 1.54A {Homo sapiens}
Length = 287
Score = 30.3 bits (69), Expect = 0.51
Identities = 10/46 (21%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Query: 63 SHFDSAYEFIRESQS----EGAILVHCYHGVSRSAT-IVIAYLMKR 103
EF+ +S +LVHC G+ R+ + + M
Sbjct: 190 DDSSDFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETAMCL 235
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein
tyrosine phosphatase precursor, phosph structural
genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Length = 301
Score = 30.3 bits (69), Expect = 0.52
Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 6/47 (12%)
Query: 63 SHFDSAYEFIRE-----SQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
+ +F R+ I+VHC G R+ T I+I ++ R
Sbjct: 204 ASTRPLLDFRRKVNKCYRGRSCPIIVHCSDGAGRTGTYILIDMVLNR 250
>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine
phosphatase, lymphoid phosphatase, PEP, LYP, struct
genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A
2qct_A* 2qcj_A* 3olr_A* 3omh_A*
Length = 309
Score = 30.3 bits (69), Expect = 0.53
Identities = 11/47 (23%), Positives = 14/47 (29%), Gaps = 6/47 (12%)
Query: 63 SHFDSAYEFIRE-----SQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
S D E I + I +HC G R+ I Y
Sbjct: 200 SSIDPILELIWDVRCYQEDDSVPICIHCSAGCGRTGVICAIDYTWML 246
>2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine
phosphatase, human, structural genomics, structural
genomics consortium, SGC; 1.50A {Homo sapiens}
Length = 303
Score = 29.9 bits (68), Expect = 0.61
Identities = 10/58 (17%), Positives = 17/58 (29%), Gaps = 7/58 (12%)
Query: 63 SHFDSAYEFIRE-----SQSEGAILVHCYHGVSRSAT-IVIAYLMKR-DDLGVQTAFD 113
S D + E + VHC G R+ + Y+ + + F
Sbjct: 206 SSPDHMLAMVEEARRLQGSGPEPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDFS 263
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP,
tyrosine phosphatase, MEG-1, structural genomics
structural genomics consortium, SGC; 2.45A {Homo
sapiens}
Length = 320
Score = 30.0 bits (68), Expect = 0.61
Identities = 9/47 (19%), Positives = 17/47 (36%), Gaps = 6/47 (12%)
Query: 63 SHFDSAYEFIRE-----SQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
+F+ + E ++VHC G+ R+ I + M
Sbjct: 217 DDSSDFLDFVCHVRNKRAGKEEPVVVHCSAGIGRTGVLITMETAMCL 263
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP,
hydrolase, signaling protein; 3.10A {Homo sapiens}
Length = 595
Score = 30.3 bits (68), Expect = 0.64
Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 9/60 (15%)
Query: 63 SHFDSAYEFIRE-------SQSEGAILVHCYHGVSRSAT-IVIAYLMKR-DDLGVQTAFD 113
S F+ + G I+VH G+ R+ T IVI LM+ G+ D
Sbjct: 424 SEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDID 483
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine
phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo
sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Length = 532
Score = 30.2 bits (68), Expect = 0.64
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 9/60 (15%)
Query: 63 SHFDSAYEFIRE-------SQSEGAILVHCYHGVSRSAT-IVIAYLMKR-DDLGVQTAFD 113
S F+ + G I+VHC G+ R+ T IVI LM+ G+ D
Sbjct: 424 SEPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDID 483
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis,
signal transduction, developm protein, hydrolase; 2.40A
{Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Length = 307
Score = 29.9 bits (68), Expect = 0.68
Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 63 SHFDSAYEFIRE-----SQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
+ + F+R + I+VHC GV RS T I + ++++
Sbjct: 215 NPPQTLVRFVRAFRDRIGAEQRPIVVHCSAGVGRSGTFITLDRILQQ 261
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine
phosphatase, human, structural GE structural genomics
consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo
sapiens} PDB: 1rpm_A 2c7s_A
Length = 286
Score = 29.9 bits (68), Expect = 0.69
Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 6/47 (12%)
Query: 63 SHFDSAYEFIRE-----SQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
+ F+R+ G I+VHC G R+ I I ++
Sbjct: 192 CYATGLLGFVRQVKFLNPPEAGPIVVHCSAGAGRTGCFIAIDTMLDM 238
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R;
PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase;
1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Length = 297
Score = 29.9 bits (68), Expect = 0.74
Identities = 8/49 (16%), Positives = 19/49 (38%), Gaps = 8/49 (16%)
Query: 63 SHFDSAYEFIRE-------SQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
+ + + S+ G ++VHC G+ R+ I + ++
Sbjct: 200 DSAQPLLQLMLDVEEDRLASEGRGPVVVHCSAGIGRTGCFIATSIGCQQ 248
>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human
tyrosine phosphatase catalytic domain, LC-PTP,
hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A
2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A*
3d42_A* 2a3k_A
Length = 309
Score = 29.6 bits (67), Expect = 0.77
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 70 EFIRESQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
E + G I+VHC G+ R+ I ++
Sbjct: 225 ESPETAAHPGPIVVHCSAGIGRTGCFIATRIGCQQ 259
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase,
phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Length = 253
Score = 29.5 bits (67), Expect = 0.77
Identities = 11/48 (22%), Positives = 17/48 (35%), Gaps = 7/48 (14%)
Query: 63 SHFDSAYEFIRESQS------EGAILVHCYHGVSRSAT-IVIAYLMKR 103
S I Q I VHC G R+ T ++ +++R
Sbjct: 155 SDGKGMINIIAAVQKQQQQSGNHPITVHCSAGAGRTGTFCALSTVLER 202
>2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor
phosphatase, human, structural GENO structural genomics
consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB:
3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A*
3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A*
3qcn_A
Length = 320
Score = 29.6 bits (67), Expect = 0.83
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 63 SHFDSAYEFIRE-----SQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
+ F+R G +LVHC GV R+ T IVI ++++
Sbjct: 226 EYALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQ 272
>4ei0_A Uncharacterized hypothetical protein; PF14725 family protein,
DUF4466, structural genomics, joint for structural
genomics, JCSG; 2.00A {Parabacteroides merdae}
Length = 312
Score = 29.8 bits (66), Expect = 0.84
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 17/137 (12%)
Query: 27 NIKFVFSIGIFPTLGKISSLTYR-HIEVADLPSEDLLSHF------DSAYEFIRESQSEG 79
I+F +++ I LGK+SS I A D S++ D + +SQ+ G
Sbjct: 35 EIEFAYAMAIPNELGKLSSAQVVSSIAGATGTYFDPNSYYTNSSGQDIPVKVCSDSQTNG 94
Query: 80 AILVHCYHGVSRSATIVIAYLMKRDDLG--VQTAFDRVKSARDVISPNEGFMHQLALYQ- 136
V + + +AT+ Y++ + G VQ +F S V ++L Y+
Sbjct: 95 TTTVIDFTVDTCAATLRYYYIIPEEARGKDVQFSFSVKASNGQVAE------YKLGPYKI 148
Query: 137 -RMRMTLDLNFTPYKLY 152
+M M +L+ T K Y
Sbjct: 149 SKMDMAKNLSVTNDKCY 165
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase,
STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB:
2bij_A 2bv5_A*
Length = 305
Score = 29.6 bits (67), Expect = 0.97
Identities = 7/32 (21%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 73 RESQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
+E I+VH G+ R+ I + ++
Sbjct: 226 QEGPHCAPIIVHSSAGIGRTGCFIATSICCQQ 257
>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo
sapiens} SCOP: c.45.1.2
Length = 314
Score = 29.2 bits (66), Expect = 1.3
Identities = 9/49 (18%), Positives = 18/49 (36%), Gaps = 8/49 (16%)
Query: 63 SHFDSAYEFIRE-------SQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
S F+ + + G ++HC G+ RS T ++ +
Sbjct: 187 ESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVL 235
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A
{Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Length = 342
Score = 28.5 bits (64), Expect = 2.0
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 70 EFIRESQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
+++++ E ILVHC GV R+ T I I L+ +
Sbjct: 229 DYMKQIPPESPILVHCSAGVGRTGTFIAIDRLIYQ 263
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine
phosphatase, WPD-loop, sulfamic acid, inhibitor, drug
design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A
2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A*
2i4h_A* 2i5x_A* 2ahs_A
Length = 291
Score = 28.0 bits (63), Expect = 2.9
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 70 EFIRESQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
++I S G +VHC GV R+ T I + ++++
Sbjct: 210 DYINRSPGAGPTVVHCSAGVGRTGTFIALDRILQQ 244
>1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase
activating protein, 4-helix bundle, disorder, signaling
protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1
c.45.1.2 PDB: 1g4u_S
Length = 383
Score = 27.9 bits (62), Expect = 3.1
Identities = 11/49 (22%), Positives = 16/49 (32%), Gaps = 4/49 (8%)
Query: 73 RESQSEGAILVHCYHGVSRSAT-IVIAYLMKRDDLGVQTAFDRVKSARD 120
R S + ++HC GV R+ T L + RD
Sbjct: 309 RSSSDKHLPMIHCLGGVGRTGTMAAALVLKDNPHSNL---EQVRADFRD 354
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source,
amidohydrolase, sargasso SEA, structural GEN protein
structure initiative, PSI; HET: ARG; 2.30A
{Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Length = 408
Score = 27.7 bits (62), Expect = 4.1
Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 15/50 (30%)
Query: 64 HFDSAYEFIRESQSEGAILVHCYHGVS-----RSATIVIAYLMKRDDLGV 108
H D+A +F A +V G++ +++TI A L +++G
Sbjct: 323 HGDNAKQF--------AYMVEW--GMTPLEAIQASTIKTATLFGIENIGQ 362
>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase,
methyltransferase, guanylyltransferase, zinc finger,
icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1
PDB: 2cse_V
Length = 1275
Score = 27.9 bits (61), Expect = 4.4
Identities = 12/45 (26%), Positives = 19/45 (42%)
Query: 167 VPSSYGELIKADPGLTSNRPNPNVYKCKKCRRVLFTLNNIFAHNR 211
S+ A GL + + Y+C C VLF+ ++ AH
Sbjct: 157 ATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVA 201
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural
genomics, protein structure initiative; NMR
{Arabidopsis thaliana} SCOP: c.46.1.3
Length = 129
Score = 26.2 bits (58), Expect = 5.6
Identities = 7/45 (15%), Positives = 15/45 (33%), Gaps = 1/45 (2%)
Query: 49 RHIEVADLPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSA 93
++ + + + + D + I+V C G RS
Sbjct: 53 INVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIVGCQSGG-RSI 96
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism,
phosphorylation, endoplasmic reticulum, oxidation,
hydrolase, acetylation; 1.5A {Homo sapiens} SCOP:
c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A
2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A*
2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A*
2zn7_A* ...
Length = 304
Score = 26.8 bits (60), Expect = 6.2
Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 8/49 (16%)
Query: 63 SHFDSAYEFIRE-------SQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
S F+ + S G ++VHC G+ RS T + +
Sbjct: 192 ESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLL 240
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein;
NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Length = 77
Score = 25.3 bits (55), Expect = 7.0
Identities = 13/59 (22%), Positives = 20/59 (33%), Gaps = 14/59 (23%)
Query: 183 SNRPNPNVYKCKKCRRVLFTLNNI--------FAHNRGVKFTWKCQEDGVPPSDSELCK 233
S+ + YK + CR ++ + FAH G P +ELC
Sbjct: 2 SHMTTSSRYKTELCRT--YSESGRCRYGAKCQFAHGLGELRQANRH----PKYKTELCH 54
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle,
phosphorylation, plant, hydrolase; NMR {Arabidopsis
thaliana} SCOP: c.46.1.1
Length = 152
Score = 26.1 bits (57), Expect = 7.9
Identities = 6/60 (10%), Positives = 15/60 (25%), Gaps = 3/60 (5%)
Query: 56 LPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRV 115
S + +++ ++ H R T + D+ T +
Sbjct: 66 YASGSFDDKISHLVQNVKDKD---TLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNI 122
>2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14,
hydrolase; 1.65A {Homo sapiens}
Length = 325
Score = 26.5 bits (59), Expect = 8.6
Identities = 8/26 (30%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 79 GAILVHCYHGVSRSAT-IVIAYLMKR 103
I+VHC GV R+ I+ ++
Sbjct: 253 PPIVVHCSAGVGRTGVLILSELMIYC 278
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.322 0.138 0.410
Gapped
Lambda K H
0.267 0.0483 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,816,970
Number of extensions: 222657
Number of successful extensions: 569
Number of sequences better than 10.0: 1
Number of HSP's gapped: 519
Number of HSP's successfully gapped: 95
Length of query: 249
Length of database: 6,701,793
Length adjustment: 91
Effective length of query: 158
Effective length of database: 4,160,982
Effective search space: 657435156
Effective search space used: 657435156
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (25.9 bits)