RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13471
(249 letters)
>d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1
[TaxId: 9606]}
Length = 145
Score = 102 bits (254), Expect = 6e-28
Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDL 61
P + L+LG + + L+ I V ++ Y+ I V D ++
Sbjct: 4 PVEILPYLFLGSCSHSSDLQGLQACGITAVLNVSASCPNHFEGLFRYKSIPVEDNQMVEI 63
Query: 62 LSHFDSAYEFIRES-QSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARD 120
+ F A FI S G +LVH G+SRSATI +AYLM+ + + AFD VK R
Sbjct: 64 SAWFQEAIGFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQSRRVRLDEAFDFVKQRRG 123
Query: 121 VISPNEGFMHQLALYQR 137
VISPN FM QL ++
Sbjct: 124 VISPNFSFMGQLLQFET 140
>d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR
{Human (Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 100 bits (251), Expect = 3e-27
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 12/144 (8%)
Query: 5 VEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISS---------LTYRHIEVAD 55
V +Y+G+ + A + + I V + + +++ +TY I+ D
Sbjct: 26 VTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIKAND 85
Query: 56 LPSEDLLSHFDSAYEFIRES--QSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFD 113
+L ++F+ A +FI ++ Q G +LVHC G SRS T+VIAYLM R + V++A
Sbjct: 86 TQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALS 145
Query: 114 RVKSARDVISPNEGFMHQLALYQR 137
V+ R+ I PN+GF+ QL
Sbjct: 146 IVRQNRE-IGPNDGFLAQLCQLND 168
>d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1
(mkp3) [TaxId: 9606]}
Length = 144
Score = 99.1 bits (246), Expect = 7e-27
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 3/139 (2%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGIF--PTLGKISSLTYRHIEVADLPSE 59
P + LYLG D+ L E IK++ ++ Y+ I ++D S+
Sbjct: 4 PVEILPFLYLGCAKDSTNLDVLEEFGIKYILNVTPNLPNLFENAGEFKYKQIPISDHWSQ 63
Query: 60 DLLSHFDSAYEFIRESQSE-GAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSA 118
+L F A FI E++ + +LVH G+SRS T+ +AYLM++ +L + A+D VK
Sbjct: 64 NLSQFFPEAISFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMK 123
Query: 119 RDVISPNEGFMHQLALYQR 137
+ ISPN FM QL ++R
Sbjct: 124 KSNISPNFNFMGQLLDFER 142
>d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 194
Score = 77.8 bits (191), Expect = 3e-18
Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 8/102 (7%)
Query: 44 SSLTYRHIEVADL--------PSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATI 95
+ + I+ L P+ + F E E I VHC HG +R+ +
Sbjct: 73 NDIEKEGIKYIKLQCKGHGECPTTENTETFIRLCERFNERSPPELIGVHCTHGFNRTGFL 132
Query: 96 VIAYLMKRDDLGVQTAFDRVKSARDVISPNEGFMHQLALYQR 137
+ A+L+++ D ++ A AR ++ +L
Sbjct: 133 ICAFLVEKMDWSIEAAVATFAQARPPGIYKGDYLKELFRRYG 174
>d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 182
Score = 60.1 bits (145), Expect = 8e-12
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
Query: 47 TYRHIEVADLPSEDLLS-HFDSAYEFIRESQS-EGAILVHCYHGVSRSATIVIAYLMKRD 104
T + DL D + EF+ ++ EGAI VH G+ R+ T++ Y+MK
Sbjct: 76 TDAGFDHHDLFFADGSTPTDAIVKEFLDICENAEGAIAVHSKAGLGRTGTLIACYIMKHY 135
Query: 105 DLGVQTAFDRVKSARD--VISPNEGFMHQL 132
+ V+ R VI P + F+
Sbjct: 136 RMTAAETIAWVRICRPGSVIGPQQQFLVMK 165
>d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten
(Pten tumor suppressor), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 174
Score = 55.0 bits (132), Expect = 4e-10
Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 6/136 (4%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVA----DLP 57
P E +Y +++D + S N ++++ + R + + P
Sbjct: 25 PAERLEGVYRNNIDDVVRFLDSKHKNHYKIYNLCAERHY-DTAKFNCRVAQYPFEDHNPP 83
Query: 58 SEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIVIAYLMKR-DDLGVQTAFDRVK 116
+L+ F + +HC G R+ ++ AYL+ R L Q A D
Sbjct: 84 QLELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEALDFYG 143
Query: 117 SARDVISPNEGFMHQL 132
R Q
Sbjct: 144 EVRTRDKKGVTIPSQR 159
>d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human
(Homo sapiens), pr-1 [TaxId: 9606]}
Length = 152
Score = 54.3 bits (130), Expect = 5e-10
Identities = 19/105 (18%), Positives = 39/105 (37%), Gaps = 10/105 (9%)
Query: 44 SSLTYRHIEVADL-------PSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIV 96
+ + I V D PS ++ + S + + I VHC G+ R+ +V
Sbjct: 48 TLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLV 107
Query: 97 IAYLMKRDDLGVQTAFDRVKSARD--VISPNEGFMHQLALYQRMR 139
L++ + + A ++ R S ++ + R+R
Sbjct: 108 ALALIEG-GMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLR 151
>d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate
phosphohydrolase (phytase) PhyA {Selenomonas ruminantium
[TaxId: 971]}
Length = 313
Score = 52.7 bits (126), Expect = 9e-09
Identities = 15/108 (13%), Positives = 33/108 (30%), Gaps = 6/108 (5%)
Query: 39 TLGKISSLTYRHIEVAD--LPSEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSATIV 96
+ + + + Y I D P+ + D F R + + HC GV R+ +
Sbjct: 174 EVAEAAGMRYFRIAATDHVWPTPEN---IDRFLAFYRTLPQDAWLHFHCEAGVGRTTAFM 230
Query: 97 IAYLM-KRDDLGVQTAFDRVKSARDVISPNEGFMHQLALYQRMRMTLD 143
+ M K + ++ R + + + +
Sbjct: 231 VMTDMLKNPSVSLKDILYRQHEIGGFYYGEFPIKTKDKDSWKTKYYRE 278
>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 176
Score = 46.2 bits (109), Expect = 6e-07
Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 6/81 (7%)
Query: 46 LTYRHIEVADLPSED----LLSHFDSAYEFIRESQSEG-AILVHCYHGVSRSATIVIAYL 100
I P D ++ E + L+H Y G+ RS + L
Sbjct: 72 YQQCGIITHHHPIADGGTPDIASCCEIMEELTTCLKNYRKTLIHSYGGLGRSCLVAACLL 131
Query: 101 MKR-DDLGVQTAFDRVKSARD 120
+ D + + A D ++ R
Sbjct: 132 LYLSDTISPEQAIDSLRDLRG 152
>d1g4us2 c.45.1.2 (S:297-539) SptP tyrosine phosphatase, catalytic
domain {Salmonella typhimurium [TaxId: 90371]}
Length = 243
Score = 31.6 bits (71), Expect = 0.066
Identities = 15/89 (16%), Positives = 25/89 (28%), Gaps = 14/89 (15%)
Query: 45 SLTYRHIEVADLPSEDLLSHFDSAYEFI-------------RESQSEGAILVHCYHGVSR 91
T + V + P L D R S + ++HC GV R
Sbjct: 132 RYTIPVLHVKNWPDHQPLPSTDQLEYLADRVKNSNQNGAPGRSSSDKHLPMIHCLGGVGR 191
Query: 92 SAT-IVIAYLMKRDDLGVQTAFDRVKSAR 119
+ T L ++ + +R
Sbjct: 192 TGTMAAALVLKDNPHSNLEQVRADFRDSR 220
>d1lyva_ c.45.1.2 (A:) Protein-tyrosine phosphatase YopH, catalytic
domain {Yersinia enterocolitica [TaxId: 630]}
Length = 283
Score = 31.3 bits (70), Expect = 0.096
Identities = 11/46 (23%), Positives = 18/46 (39%)
Query: 75 SQSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSARD 120
S+ ++H GV R+A ++ A M + D V R
Sbjct: 208 DDSKLRPVIHSRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMRV 253
>d2shpa1 c.45.1.2 (A:219-525) Tyrosine phosphatase {Human (Homo
sapiens), shp-2 [TaxId: 9606]}
Length = 307
Score = 28.7 bits (63), Expect = 0.73
Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 58 SEDLLSHFDSAYEFIRESQSEGAILVHCYHGVSRSAT-IVIAYLMKR 103
+L + + G ++VHC G+ R+ T IVI L+
Sbjct: 214 PGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDI 260
>d1weqa_ g.50.1.2 (A:) PHD finger protein 7 (NYD-SP6) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 85
Score = 26.4 bits (58), Expect = 1.1
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 182 TSNRPNPNVYKCKKCRRVL 200
+S RPN ++C +C
Sbjct: 62 SSLRPNSKKWECNECLPAS 80
>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 37
Score = 25.0 bits (54), Expect = 1.3
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Query: 189 NVYKCKKCRRVLFTLNN-----IFAHNRGVK 214
+ Y+CK C RV ++N + +H R VK
Sbjct: 7 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVK 37
>d1u1ha1 c.1.22.2 (A:2-395)
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase MetE {Thale cress (Arabidopsis
thaliana) [TaxId: 3702]}
Length = 394
Score = 26.5 bits (58), Expect = 3.4
Identities = 10/62 (16%), Positives = 16/62 (25%), Gaps = 1/62 (1%)
Query: 54 ADLPSEDLLSHFDSAYEFIRESQSEGAILVH-CYHGVSRSATIVIAYLMKRDDLGVQTAF 112
L F AY + + S +LV + + A + L G
Sbjct: 210 VMDLEGQKLQAFTGAYAELESTLSGLNVLVETYFADIPAEAYKTLTSLKGVTAFGFDLVR 269
Query: 113 DR 114
Sbjct: 270 GT 271
>d3be7a2 c.1.9.18 (A:57-359) Zn-dependent arginine carboxypeptidase
{Unidentified organism [TaxId: 32644]}
Length = 303
Score = 26.5 bits (56), Expect = 3.4
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 91 RSATIVIAYLMKRDDLG 107
+++TI A L +++G
Sbjct: 287 QASTIKTATLFGIENIG 303
>d1z60a1 g.49.1.2 (A:328-386) TFIIH p44 subunit cysteine-rich domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 59
Score = 24.4 bits (53), Expect = 3.9
Identities = 8/25 (32%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 186 PNPNVYKCKKCRRVLFTLN-NIFAH 209
+ +VY C C+ V F ++ ++F H
Sbjct: 26 KDQHVYVCAVCQNV-FCVDCDVFVH 49
>d2pw9a1 c.97.1.5 (A:7-257) Uncharacterized protein DP1777
{Desulfotalea psychrophila [TaxId: 84980]}
Length = 251
Score = 25.4 bits (55), Expect = 6.5
Identities = 25/143 (17%), Positives = 41/143 (28%), Gaps = 10/143 (6%)
Query: 2 PNLVEENLYLGDLNDAMGLKSSNEANIKFVFSIGIFPTLGKISSLTYRHIEVADLPSEDL 61
+ E L ++ NE + + + G G + +E P D
Sbjct: 65 AEEIREILVCPQGRISVYADVENEEPREVIITSGC----GGTGKIPKEMLEGEFAPLADY 120
Query: 62 LSHFDSAYEFIRE--SQSEGAILVHCYHGVSRSATIVIAYLMKRDDLGVQTAFDRVKSAR 119
F FIRE S HC HG + +D+G A D K
Sbjct: 121 CLPFAEIKSFIREALHSSPLGPQTHCVHGCGLWNNGRLQVY--HEDVGRHNAVD--KVLG 176
Query: 120 DVISPNEGFMHQLALYQRMRMTL 142
++ + R+ +
Sbjct: 177 SILLGRASNNSAVYTTGRLTSDM 199
>d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 272
Score = 25.2 bits (54), Expect = 8.4
Identities = 7/33 (21%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 69 YEFIRESQSEGAILVHCYHGVSRSATIVIAYLM 101
+ + + +L HC+ G R+ V+A ++
Sbjct: 141 HRVVTLLAAGRPVLTHCFAGKDRTG-FVVALVL 172
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.138 0.410
Gapped
Lambda K H
0.267 0.0319 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 934,764
Number of extensions: 42284
Number of successful extensions: 139
Number of sequences better than 10.0: 1
Number of HSP's gapped: 134
Number of HSP's successfully gapped: 19
Length of query: 249
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 166
Effective length of database: 1,268,006
Effective search space: 210488996
Effective search space used: 210488996
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (25.0 bits)