BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13475
(468 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7TQ48|SRCA_MOUSE Sarcalumenin OS=Mus musculus GN=Srl PE=1 SV=1
Length = 910
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/419 (47%), Positives = 277/419 (66%), Gaps = 8/419 (1%)
Query: 28 LRDKRHVHGILKLDEEFKEEEELLAKTIETTLKELKRLYDNAIKPLEITYKYRDLSNRHF 87
LRD+ H+ L L+E+ A L+ L+++Y +IKPLE +YKY +L
Sbjct: 469 LRDRSHIDKTLMLNEDKP------ADDYSAVLQRLRKIYHTSIKPLEQSYKYNELRQHEI 522
Query: 88 ADPEIFSKPLVLFMGPWSGGKSSIINYLLDNEYSQNSLRTGAEPSPAYFNILSWGESPTI 147
D EI SKP+VLF+GPWS GKS++INYLL E ++ L TGAEP+ + F +L G
Sbjct: 523 TDGEITSKPMVLFLGPWSVGKSTMINYLLGLEDTRYQLYTGAEPTTSEFTVLMHGPKLKT 582
Query: 148 LDGTQLAADW--TFSGLQKFGQGLLDRLRGLQLPHPLLEKINIVEIPGILEIRKQVERQF 205
++G +AAD +FS L+KFGQ L++L G+++PH LLE++ V+ PGI+E RKQ ER +
Sbjct: 583 IEGIVMAADSARSFSPLEKFGQNFLEKLIGIEVPHKLLERVTFVDTPGIIENRKQQERGY 642
Query: 206 PFNDACQWFIDRADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRIILNKADQVKPEEL 265
PFND CQWFIDRAD+IF+V+DP+KLDVG E E + QLKGRE Q RIILNKAD + + L
Sbjct: 643 PFNDVCQWFIDRADLIFVVFDPTKLDVGLELEMLFRQLKGRESQIRIILNKADNLATQML 702
Query: 266 MRVQGTLIWNISPLMSSSEPPVMYSTSLWSNPYEVGAPIRLLQAQEHAFLRDLRNAIDKR 325
MRV G L W+++PL++ +EPP +Y +S W Y+ L +E + L DL I+ R
Sbjct: 703 MRVYGALFWSLAPLINVTEPPRVYVSSFWPQDYKPDTHRELFLKEEISLLEDLNQVIENR 762
Query: 326 VENKIASARRFAVRVRNHAKMVDCYLTTYYNHKTFFGNRKKVADDIIEHPQDYHIYAGLS 385
+ENKIA R+ A+RVR HA +VD YL TY + TFF + + V DI+E P ++I+ +
Sbjct: 763 LENKIAFIRQHAIRVRIHALLVDRYLQTYKDKMTFFSDGELVFKDIVEDPDKFYIFKTIL 822
Query: 386 TLTNISRYDLPDPEVYRDFFRLNPVFEFKKLSDTCTYFRGCPINRLDVAIAYDLPELVG 444
TN+S++DLP+ E Y+DFF +NP+ FK LS C+Y GC + +++ AI +LP L+G
Sbjct: 823 AKTNVSKFDLPNREAYKDFFGINPISNFKLLSQQCSYMGGCFLEKIERAITQELPSLLG 881
>sp|Q90577|SRCA_CHICK Sarcalumenin OS=Gallus gallus GN=SRL PE=2 SV=1
Length = 471
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/418 (46%), Positives = 275/418 (65%), Gaps = 9/418 (2%)
Query: 29 RDKRHVHGILKLDEEFKEEEELLAKTIETTLKELKRLYDNAIKPLEITYKYRDLSNRHFA 88
RD+ H+ LKL+E+ A L+ L+++Y +IKPLE +Y+Y +L
Sbjct: 32 RDRSHLENTLKLNEDKP------ADDFSGVLQRLRKIYHASIKPLEQSYRYNELRQHEIT 85
Query: 89 DPEIFSKPLVLFMGPWSGGKSSIINYLLDNEYSQNSLRTGAEPSPAYFNILSWGESPTIL 148
D EI SKP+VLF+GPWS GKSS+INYLL + + L TGA P+ + F ++ G +
Sbjct: 86 DGEITSKPMVLFLGPWSVGKSSMINYLLGLDDTPYQLYTGAGPTTSEFTVIMHGPKLKTI 145
Query: 149 DGTQLAADW--TFSGLQKFGQGLLDRLRGLQLPHPLLEKINIVEIPGILEIRKQVERQFP 206
+G +AAD +FS L+KFGQ L++L G++LPH LLE++ V+ PGI+E RKQ ER +P
Sbjct: 146 EGIVMAADSARSFSPLKKFGQNFLEKLIGIELPHKLLERVTFVDTPGIIENRKQQERGYP 205
Query: 207 FNDACQWFIDRADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRIILNKADQVKPEELM 266
FND CQWFIDRAD+IF+V+DP+KLDVG E E + QLKGRE Q RIILNKAD + +ELM
Sbjct: 206 FNDVCQWFIDRADLIFVVFDPTKLDVGLELEMLFRQLKGRESQIRIILNKADSLATQELM 265
Query: 267 RVQGTLIWNISPLMSSSEPPVMYSTSLWSNPYEVGAPIRLLQAQEHAFLRDLRNAIDKRV 326
RV G L W+++PL++ +EPP +Y +S W + Y L +E + L DL I+ R+
Sbjct: 266 RVYG-LFWSLAPLINVTEPPRVYVSSFWPHEYHPDTHKDLFLKEEISLLEDLNQVIENRM 324
Query: 327 ENKIASARRFAVRVRNHAKMVDCYLTTYYNHKTFFGNRKKVADDIIEHPQDYHIYAGLST 386
ENKIA R+ A+RVR HA +VD YL TY + TFF + + V DI+E P + I+ +
Sbjct: 325 ENKIAFIRQHAIRVRIHALLVDRYLQTYKDKMTFFSDGELVFRDIVEDPDKFFIFKSILA 384
Query: 387 LTNISRYDLPDPEVYRDFFRLNPVFEFKKLSDTCTYFRGCPINRLDVAIAYDLPELVG 444
TN+S++DLP E Y+DFF +NP+ FK LS C+Y GC + +++ AI +LP+L+G
Sbjct: 385 KTNVSKFDLPQREAYKDFFGINPITSFKLLSQQCSYMGGCYLEKIEKAITRELPDLLG 442
>sp|P13666|SRCA_RABIT Sarcalumenin OS=Oryctolagus cuniculus GN=SRL PE=2 SV=1
Length = 908
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/426 (45%), Positives = 282/426 (66%), Gaps = 12/426 (2%)
Query: 17 QKQEDI--EIPDNLRDKRHVHGILKLDEEFKEEEELLAKTIETTLKELKRLYDNAIKPLE 74
++ ED+ E+P +RD+ H+ L L+E+ ++ L+ L+++Y ++IKPLE
Sbjct: 456 EETEDVSEEVP--MRDRSHIQKTLMLNEDKPTDD------FSAVLQRLRKIYHSSIKPLE 507
Query: 75 ITYKYRDLSNRHFADPEIFSKPLVLFMGPWSGGKSSIINYLLDNEYSQNSLRTGAEPSPA 134
+YKY +L D EI SKP+VLF+GPWS GKS++INYLL E ++ L TGAEP+ +
Sbjct: 508 QSYKYNELRQHEITDGEITSKPMVLFLGPWSVGKSTMINYLLGLENTRYQLYTGAEPTTS 567
Query: 135 YFNILSWGESPTILDGTQLAADW--TFSGLQKFGQGLLDRLRGLQLPHPLLEKINIVEIP 192
F +L G ++G +AAD +FS L+KFGQ L++L G+++PH LLE++ V+ P
Sbjct: 568 EFTVLMHGPKLKTIEGIVMAADSARSFSPLEKFGQNFLEKLIGIEVPHKLLERVTFVDTP 627
Query: 193 GILEIRKQVERQFPFNDACQWFIDRADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRI 252
GI+E RKQ ER +PFND CQWFIDRAD+IF+V+DP+KLDVG E E + QLKGRE Q RI
Sbjct: 628 GIIENRKQQERGYPFNDVCQWFIDRADLIFVVFDPTKLDVGLELETLFRQLKGRESQIRI 687
Query: 253 ILNKADQVKPEELMRVQGTLIWNISPLMSSSEPPVMYSTSLWSNPYEVGAPIRLLQAQEH 312
ILNKAD + + LMRV G L W+++PL++ +EPP +Y +S W Y+ L +E
Sbjct: 688 ILNKADNLATQMLMRVYGALFWSLAPLINVTEPPRVYVSSFWPQEYKPDTHRELFLREEI 747
Query: 313 AFLRDLRNAIDKRVENKIASARRFAVRVRNHAKMVDCYLTTYYNHKTFFGNRKKVADDII 372
+ L DL I+ R+ENKIA R+ A+RVR HA +VD YL TY + TFF + + V DI+
Sbjct: 748 SLLEDLNQVIENRLENKIAFIRQHAIRVRIHALLVDRYLQTYKDKMTFFSDGELVFKDIV 807
Query: 373 EHPQDYHIYAGLSTLTNISRYDLPDPEVYRDFFRLNPVFEFKKLSDTCTYFRGCPINRLD 432
E P ++I+ + TN+S++DLP+ E Y+DFF +NP+ FK LS C+Y GC + +++
Sbjct: 808 EDPDKFYIFKTILAKTNVSKFDLPNREAYKDFFGINPISSFKLLSQQCSYMGGCFLEKIE 867
Query: 433 VAIAYD 438
AI +
Sbjct: 868 RAITQE 873
>sp|Q86TD4|SRCA_HUMAN Sarcalumenin OS=Homo sapiens GN=SRL PE=2 SV=2
Length = 932
Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/413 (46%), Positives = 274/413 (66%), Gaps = 8/413 (1%)
Query: 28 LRDKRHVHGILKLDEEFKEEEELLAKTIETTLKELKRLYDNAIKPLEITYKYRDLSNRHF 87
LRD+ H+ L L+E+ ++ L+ L+++Y ++IKPLE +YKY +L
Sbjct: 491 LRDRSHIEKTLMLNEDKPSDD------YSAVLQRLRKIYHSSIKPLEQSYKYNELRQHEI 544
Query: 88 ADPEIFSKPLVLFMGPWSGGKSSIINYLLDNEYSQNSLRTGAEPSPAYFNILSWGESPTI 147
D EI SKP+VLF+GPWS GKS++INYLL E ++ L TGAEP+ + F +L G
Sbjct: 545 TDGEITSKPMVLFLGPWSVGKSTMINYLLGLENTRYQLYTGAEPTTSEFTVLMHGPKLKT 604
Query: 148 LDGTQLAADW--TFSGLQKFGQGLLDRLRGLQLPHPLLEKINIVEIPGILEIRKQVERQF 205
++G +AAD +FS L+KFGQ L++L G+++PH LLE++ V+ PGI+E RKQ ER +
Sbjct: 605 IEGIVMAADSARSFSPLEKFGQNFLEKLIGIEVPHKLLERVTFVDTPGIIENRKQQERGY 664
Query: 206 PFNDACQWFIDRADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRIILNKADQVKPEEL 265
PFND CQWFIDRAD+IF+V+DP+KLDVG E E + QLKGRE Q RIILNKAD + + L
Sbjct: 665 PFNDVCQWFIDRADLIFVVFDPTKLDVGLELEMLFRQLKGRESQIRIILNKADNLATQML 724
Query: 266 MRVQGTLIWNISPLMSSSEPPVMYSTSLWSNPYEVGAPIRLLQAQEHAFLRDLRNAIDKR 325
MRV G L W+++PL++ +EPP +Y +S W Y+ L +E + L DL I+ R
Sbjct: 725 MRVYGALFWSLAPLINVTEPPRVYVSSFWPQEYKPDTHQELFLQEEISLLEDLNQVIENR 784
Query: 326 VENKIASARRFAVRVRNHAKMVDCYLTTYYNHKTFFGNRKKVADDIIEHPQDYHIYAGLS 385
+ENKIA R+ A+RVR HA +VD YL TY + TFF + + V DI+E P ++I+ +
Sbjct: 785 LENKIAFIRQHAIRVRIHALLVDRYLQTYKDKMTFFSDGELVFKDIVEDPDKFYIFKTIL 844
Query: 386 TLTNISRYDLPDPEVYRDFFRLNPVFEFKKLSDTCTYFRGCPINRLDVAIAYD 438
TN+S++DLP+ E Y+DFF +NP+ FK LS C+Y GC + +++ AI +
Sbjct: 845 AKTNVSKFDLPNREAYKDFFGINPISSFKLLSQQCSYMGGCFLEKIERAITQE 897
>sp|Q8BH64|EHD2_MOUSE EH domain-containing protein 2 OS=Mus musculus GN=Ehd2 PE=1 SV=1
Length = 543
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 196/400 (49%), Gaps = 30/400 (7%)
Query: 53 KTIETTLKELKRLYDNAIKPLEITYKYRDLSNRHFADPEIFSKPLVLFMGPWSGGKSSII 112
+ I T LK LY + PLE Y++ + D + KP+VL G +S GK+S I
Sbjct: 16 EAIRTVTSSLKELYRTKLLPLEEHYRFGSFHSPALEDADFDGKPMVLVAGQYSTGKTSFI 75
Query: 113 NYLLDNEYSQNSLRTGAEPSPAYFNILSWGESPTILDGTQLAAD--WTFSGLQKFGQGLL 170
YLL+ E + R G EP+ F + GE+ + G L D F L FG L
Sbjct: 76 QYLLEQEVPGS--RVGPEPTTDCFVAVMHGETEGTVPGNALVVDPEKPFRKLNPFGNTFL 133
Query: 171 DRLRGLQLPHPLLEKINIVEIPGILEIRKQ-VERQFPFNDACQWFIDRADIIFLVYDPSK 229
+R QLP+ +LE I+I++ PGIL KQ V R + F +WF +R D+I L++D K
Sbjct: 134 NRFMCAQLPNQVLESISIIDTPGILSGAKQRVSRGYDFPAVLRWFAERVDLIILLFDAHK 193
Query: 230 LDVGPETEAILDQLKGREYQTRIILNKADQVKPEELMRVQGTLIWNISPLMSSSEPPVMY 289
L++ E + L+G E + R++LNKAD V+ ++LMRV G L+W + ++ + E +Y
Sbjct: 194 LEISDEFSEAIGALRGHEDKIRVVLNKADMVETQQLMRVYGALMWALGKVVGTPEVLRVY 253
Query: 290 STSLWSNPYEVGAPIRLLQAQEHAFLRDL----RNAIDKRVENKIASARRFAVRVRNHAK 345
S WS P V RL + +E RD+ R+A +++ + + AR VR HA
Sbjct: 254 IGSFWSQPLLVPDNRRLFELEEQDLFRDIQGLPRHAALRKLNDLVKRAR----LVRVHA- 308
Query: 346 MVDCYLTTYYNHK--TFFGNRKKVADDIIEHPQDYHIYAGLSTLTNISRYDLPDPEVYRD 403
Y+ +Y + T FG K I++ P I+A + +IS D PD + ++
Sbjct: 309 ----YIISYLKKEMPTVFGKENKKKQLILKLPV---IFAKIQLEHHISPGDFPDCQKMQE 361
Query: 404 FFRLNPVFEFKKLSDTCTYFRGCPINRLDVAIAYDLPELV 443
+ +F L + LD +A D+ +L+
Sbjct: 362 LLMAHDFTKFHSLKPKL-------LEALDDMLAQDIAKLM 394
>sp|Q4V8H8|EHD2_RAT EH domain-containing protein 2 OS=Rattus norvegicus GN=Ehd2 PE=1
SV=1
Length = 543
Score = 179 bits (454), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 196/401 (48%), Gaps = 30/401 (7%)
Query: 52 AKTIETTLKELKRLYDNAIKPLEITYKYRDLSNRHFADPEIFSKPLVLFMGPWSGGKSSI 111
++ I T LK LY + PLE Y++ + D + KP+VL G +S GK+S
Sbjct: 15 SEAIRTVTSSLKELYRTKLLPLEEHYRFGSFHSPALEDADFDGKPMVLVAGQYSTGKTSF 74
Query: 112 INYLLDNEYSQNSLRTGAEPSPAYFNILSWGESPTILDGTQLAAD--WTFSGLQKFGQGL 169
I YLL+ E + R G EP+ F + GE+ + G L D F L FG
Sbjct: 75 IQYLLEQEVPGS--RVGPEPTTDCFVAVMHGETEGTVPGNALVVDPEKPFRKLNPFGNTF 132
Query: 170 LDRLRGLQLPHPLLEKINIVEIPGILEIRKQ-VERQFPFNDACQWFIDRADIIFLVYDPS 228
L+R QLP+ +LE I+I++ PGIL KQ V R + F +WF +R D+I L++D
Sbjct: 133 LNRFMCAQLPNQVLESISIIDTPGILSGAKQRVSRGYDFPAVLRWFAERVDLIILLFDAH 192
Query: 229 KLDVGPETEAILDQLKGREYQTRIILNKADQVKPEELMRVQGTLIWNISPLMSSSEPPVM 288
KL++ E + L+G E + R++LNKAD V+ ++LMRV G L+W + ++ + E +
Sbjct: 193 KLEISDEFSEAIGALRGHEDKIRVVLNKADMVETQQLMRVYGALMWALGKVVGTPEVLRV 252
Query: 289 YSTSLWSNPYEVGAPIRLLQAQEHAFLRDL----RNAIDKRVENKIASARRFAVRVRNHA 344
Y S WS P V RL + +E RD+ R+A +++ + + AR VR HA
Sbjct: 253 YIGSFWSQPLLVPDNRRLFELEEQDLFRDIQGLPRHAALRKLNDLVKRAR----LVRVHA 308
Query: 345 KMVDCYLTTYYNHK--TFFGNRKKVADDIIEHPQDYHIYAGLSTLTNISRYDLPDPEVYR 402
Y+ +Y + + FG K I + P I+A + +IS D PD + +
Sbjct: 309 -----YIISYLKKEMPSVFGKENKKKQLIFKLPV---IFAKIQLEHHISPGDFPDCQKMQ 360
Query: 403 DFFRLNPVFEFKKLSDTCTYFRGCPINRLDVAIAYDLPELV 443
+ + +F L + LD + +D+ +L+
Sbjct: 361 ELLMAHDFTKFHSLKPKL-------LEALDEMLTHDIAKLM 394
>sp|Q641Z6|EHD1_RAT EH domain-containing protein 1 OS=Rattus norvegicus GN=Ehd1 PE=1
SV=1
Length = 534
Score = 178 bits (452), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 204/406 (50%), Gaps = 27/406 (6%)
Query: 41 DEEFKEEEELLAKTIETTLKELKRLYDNAIKPLEITYKYRDLSNRHFADPEIFSKPLVLF 100
D K+E EL +T + L++LY + PLE Y++ + + D + +KP+VL
Sbjct: 8 DARRKKEPELF----QTVAEGLRQLYAQKLLPLEEHYRFHEFHSPALEDADFDNKPMVLL 63
Query: 101 MGPWSGGKSSIINYLLDNEYSQNSLRTGAEPSPAYFNILSWGESPTILDGTQLAAD--WT 158
+G +S GK++ I +L++ ++ +R G EP+ F + G + ++ G L D
Sbjct: 64 VGQYSTGKTTFIRHLIEQDFP--GMRIGPEPTTDSFIAVMHGPTEGVVPGNALVVDPRRP 121
Query: 159 FSGLQKFGQGLLDRLRGLQLPHPLLEKINIVEIPGILEIRKQ-VERQFPFNDACQWFIDR 217
F L FG L+R QLP+P+L+ I+I++ PGIL KQ + R + F +WF +R
Sbjct: 122 FRKLNAFGNAFLNRFMCAQLPNPVLDSISIIDTPGILSGEKQRISRGYDFAAVLEWFAER 181
Query: 218 ADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRIILNKADQVKPEELMRVQGTLIWNIS 277
D I L++D KLD+ E ++ LK E + R++LNKADQ++ ++LMRV G L+W++
Sbjct: 182 VDRIILLFDAHKLDISDEFSEVIKALKNHEDKIRVVLNKADQIETQQLMRVYGALMWSLG 241
Query: 278 PLMSSSEPPVMYSTSLWSNPYEVGAPIRLLQAQEHAFLRDL----RNAIDKRVENKIASA 333
++++ E +Y S WS+P + +L +A+E +D+ RNA +++ + I A
Sbjct: 242 KIINTPEVVRVYIGSFWSHPLLIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRA 301
Query: 334 RRFAVRVRNHAKMVDCYLTTYYNHKTFFGNRKKVADDIIEHPQDYHIYAGLSTLTNISRY 393
R V HA ++ N +K++ +++ E IY + IS
Sbjct: 302 RLAKV----HAYIISSLKKEMPNVFGKESKKKELVNNLGE------IYQKIEREHQISSG 351
Query: 394 DLPDPEVYRDFFRLNPVFEFK----KLSDTCTYFRGCPINRLDVAI 435
D P ++ + +F+ KL DT I RL V +
Sbjct: 352 DFPSLRKMQELLQTQDFSKFQALKPKLLDTVDDMLANDIARLMVMV 397
>sp|Q9WVK4|EHD1_MOUSE EH domain-containing protein 1 OS=Mus musculus GN=Ehd1 PE=1 SV=1
Length = 534
Score = 178 bits (452), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 204/406 (50%), Gaps = 27/406 (6%)
Query: 41 DEEFKEEEELLAKTIETTLKELKRLYDNAIKPLEITYKYRDLSNRHFADPEIFSKPLVLF 100
D K+E EL +T + L++LY + PLE Y++ + + D + +KP+VL
Sbjct: 8 DARRKKEPELF----QTVAEGLRQLYAQKLLPLEEHYRFHEFHSPALEDADFDNKPMVLL 63
Query: 101 MGPWSGGKSSIINYLLDNEYSQNSLRTGAEPSPAYFNILSWGESPTILDGTQLAAD--WT 158
+G +S GK++ I +L++ ++ +R G EP+ F + G + ++ G L D
Sbjct: 64 VGQYSTGKTTFIRHLIEQDFP--GMRIGPEPTTDSFIAVMHGPTEGVVPGNALVVDPRRP 121
Query: 159 FSGLQKFGQGLLDRLRGLQLPHPLLEKINIVEIPGILEIRKQ-VERQFPFNDACQWFIDR 217
F L FG L+R QLP+P+L+ I+I++ PGIL KQ + R + F +WF +R
Sbjct: 122 FRKLNAFGNAFLNRFMCAQLPNPVLDSISIIDTPGILSGEKQRISRGYDFAAVLEWFAER 181
Query: 218 ADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRIILNKADQVKPEELMRVQGTLIWNIS 277
D I L++D KLD+ E ++ LK E + R++LNKADQ++ ++LMRV G L+W++
Sbjct: 182 VDRIILLFDAHKLDISDEFSEVIKALKNHEDKIRVVLNKADQIETQQLMRVYGALMWSLG 241
Query: 278 PLMSSSEPPVMYSTSLWSNPYEVGAPIRLLQAQEHAFLRDL----RNAIDKRVENKIASA 333
++++ E +Y S WS+P + +L +A+E +D+ RNA +++ + I A
Sbjct: 242 KIINTPEVVRVYIGSFWSHPLLIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRA 301
Query: 334 RRFAVRVRNHAKMVDCYLTTYYNHKTFFGNRKKVADDIIEHPQDYHIYAGLSTLTNISRY 393
R V HA ++ N +K++ +++ E IY + IS
Sbjct: 302 RLAKV----HAYIISSLKKEMPNVFGKESKKKELVNNLGE------IYQKIEREHQISSG 351
Query: 394 DLPDPEVYRDFFRLNPVFEFK----KLSDTCTYFRGCPINRLDVAI 435
D P ++ + +F+ KL DT I RL V +
Sbjct: 352 DFPSLRKMQELLQTQDFSKFQALKPKLLDTVDDMLANDIARLMVMV 397
>sp|Q9EQP2|EHD4_MOUSE EH domain-containing protein 4 OS=Mus musculus GN=Ehd4 PE=1 SV=1
Length = 541
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 178/349 (51%), Gaps = 15/349 (4%)
Query: 54 TIETTLKELKRLYDNAIKPLEITYKYRDLSNRHFADPEIFSKPLVLFMGPWSGGKSSIIN 113
++T L+ LY + PLE Y++ + + D + +KP++L +G +S GK++ I
Sbjct: 20 AVQTVTGGLRSLYQRKVLPLEEAYRFHEFHSPALEDADFENKPMILLVGQYSTGKTTFIR 79
Query: 114 YLLDNEYSQNSLRTGAEPSPAYFNILSWGESPTILDGTQLAAD--WTFSGLQKFGQGLLD 171
YLL+ ++ +R G EP+ F + +GE+ G L D F L +FG L+
Sbjct: 80 YLLEQDFP--GMRIGPEPTTDSFIAVMYGETEGSTPGNALVVDPKKPFRKLSRFGNAFLN 137
Query: 172 RLRGLQLPHPLLEKINIVEIPGILEIRKQ-VERQFPFNDACQWFIDRADIIFLVYDPSKL 230
R QLP+ +L+ I+I++ PGIL KQ + R + F QWF +R D I L++D KL
Sbjct: 138 RFMCSQLPNQVLKSISIIDSPGILSGEKQRISRGYDFCQVLQWFAERVDRIILLFDAHKL 197
Query: 231 DVGPETEAILDQLKGREYQTRIILNKADQVKPEELMRVQGTLIWNISPLMSSSEPPVMYS 290
D+ E + +G++ + R++LNKADQV ++LMRV G L+W++ ++++ E +Y
Sbjct: 198 DISDEFSEAIKAFRGQDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVINTPEVLRVYI 257
Query: 291 TSLWSNPYEVGAPIRLLQAQEHAFLRDLRNAIDKRVENKIASARRFAVRVRNHAKMVDCY 350
S W+ P + RL +A+ RD+++ K K+ + A + HA Y
Sbjct: 258 GSFWAQPLQNTDNRRLFEAEAQDLFRDIQSLPQKAAVRKLNDLIKRARLAKVHA-----Y 312
Query: 351 LTTYYNHK--TFFGNRKKVADDIIEHPQDYHIYAGLSTLTNISRYDLPD 397
+ +Y + FG K + I P+ IY L IS D P+
Sbjct: 313 IISYLKKEMPNMFGKENKKRELIYRLPE---IYVQLQREYQISAGDFPE 358
>sp|Q5RBP4|EHD1_PONAB EH domain-containing protein 1 OS=Pongo abelii GN=EHD1 PE=2 SV=1
Length = 534
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 204/406 (50%), Gaps = 27/406 (6%)
Query: 41 DEEFKEEEELLAKTIETTLKELKRLYDNAIKPLEITYKYRDLSNRHFADPEIFSKPLVLF 100
D K+E EL +T + L++LY + PLE Y++ + + D + +KP+VL
Sbjct: 8 DARRKKEPELF----QTVAEGLRQLYAQKLLPLEEHYRFHEFHSPALEDADFDNKPMVLL 63
Query: 101 MGPWSGGKSSIINYLLDNEYSQNSLRTGAEPSPAYFNILSWGESPTILDGTQLAAD--WT 158
+G +S GK++ I +L++ ++ +R G EP+ F + G + ++ G L D
Sbjct: 64 VGQYSTGKTTFIRHLIEQDFP--GMRIGPEPTTDSFIAVMHGPTEGVVPGNALVVDPRRP 121
Query: 159 FSGLQKFGQGLLDRLRGLQLPHPLLEKINIVEIPGILEIRKQ-VERQFPFNDACQWFIDR 217
F L FG L+R QLP+P+L+ I+I++ PGIL KQ + R + F +WF +R
Sbjct: 122 FRKLNAFGNAFLNRFMCAQLPNPVLDSISIIDTPGILSGEKQRISRGYDFAAVLEWFAER 181
Query: 218 ADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRIILNKADQVKPEELMRVQGTLIWNIS 277
D I L++D KLD+ E ++ LK E + R++LNKADQ++ ++LMRV G L+W++
Sbjct: 182 VDRIILLFDAHKLDISDEFSEVIKALKNHEDKIRVVLNKADQIETQQLMRVYGALMWSLG 241
Query: 278 PLMSSSEPPVMYSTSLWSNPYEVGAPIRLLQAQEHAFLRDL----RNAIDKRVENKIASA 333
++++ E +Y S WS+P + +L +A+E +D+ RNA +++ + I A
Sbjct: 242 KIINTPEVVRVYIGSFWSHPLLIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRA 301
Query: 334 RRFAVRVRNHAKMVDCYLTTYYNHKTFFGNRKKVADDIIEHPQDYHIYAGLSTLTNISRY 393
R V HA ++ N +K++ +++ E IY + IS
Sbjct: 302 RLAKV----HAYIISSLKKEMPNVFGKESKKKELVNNLGE------IYQKIEREHQISPG 351
Query: 394 DLPDPEVYRDFFRLNPVFEFK----KLSDTCTYFRGCPINRLDVAI 435
D P ++ + +F+ KL DT I RL V +
Sbjct: 352 DFPSLRKMQELLQTQDFSKFQALKPKLLDTVDDMLANDIARLMVMV 397
>sp|Q9H4M9|EHD1_HUMAN EH domain-containing protein 1 OS=Homo sapiens GN=EHD1 PE=1 SV=2
Length = 534
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 204/406 (50%), Gaps = 27/406 (6%)
Query: 41 DEEFKEEEELLAKTIETTLKELKRLYDNAIKPLEITYKYRDLSNRHFADPEIFSKPLVLF 100
D K+E EL +T + L++LY + PLE Y++ + + D + +KP+VL
Sbjct: 8 DARRKKEPELF----QTVAEGLRQLYAQKLLPLEEHYRFHEFHSPALEDADFDNKPMVLL 63
Query: 101 MGPWSGGKSSIINYLLDNEYSQNSLRTGAEPSPAYFNILSWGESPTILDGTQLAAD--WT 158
+G +S GK++ I +L++ ++ +R G EP+ F + G + ++ G L D
Sbjct: 64 VGQYSTGKTTFIRHLIEQDFP--GMRIGPEPTTDSFIAVMHGPTEGVVPGNALVVDPRRP 121
Query: 159 FSGLQKFGQGLLDRLRGLQLPHPLLEKINIVEIPGILEIRKQ-VERQFPFNDACQWFIDR 217
F L FG L+R QLP+P+L+ I+I++ PGIL KQ + R + F +WF +R
Sbjct: 122 FRKLNAFGNAFLNRFMCAQLPNPVLDSISIIDTPGILSGEKQRISRGYDFAAVLEWFAER 181
Query: 218 ADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRIILNKADQVKPEELMRVQGTLIWNIS 277
D I L++D KLD+ E ++ LK E + R++LNKADQ++ ++LMRV G L+W++
Sbjct: 182 VDRIILLFDAHKLDISDEFSEVIKALKNHEDKIRVVLNKADQIETQQLMRVYGALMWSLG 241
Query: 278 PLMSSSEPPVMYSTSLWSNPYEVGAPIRLLQAQEHAFLRDL----RNAIDKRVENKIASA 333
++++ E +Y S WS+P + +L +A+E +D+ RNA +++ + I A
Sbjct: 242 KIINTPEVVRVYIGSFWSHPLLIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRA 301
Query: 334 RRFAVRVRNHAKMVDCYLTTYYNHKTFFGNRKKVADDIIEHPQDYHIYAGLSTLTNISRY 393
R V HA ++ N +K++ +++ E IY + IS
Sbjct: 302 RLAKV----HAYIISSLKKEMPNVFGKESKKKELVNNLGE------IYQKIEREHQISPG 351
Query: 394 DLPDPEVYRDFFRLNPVFEFK----KLSDTCTYFRGCPINRLDVAI 435
D P ++ + +F+ KL DT I RL V +
Sbjct: 352 DFPSLRKMQELLQTQDFSKFQALKPKLLDTVDDMLANDIARLMVMV 397
>sp|Q5E9R3|EHD1_BOVIN EH domain-containing protein 1 OS=Bos taurus GN=EHD1 PE=2 SV=1
Length = 534
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 205/406 (50%), Gaps = 27/406 (6%)
Query: 41 DEEFKEEEELLAKTIETTLKELKRLYDNAIKPLEITYKYRDLSNRHFADPEIFSKPLVLF 100
D K+E EL +T + L++LY + PLE Y++ + + D + +KP+VL
Sbjct: 8 DARRKKEPELF----QTVSEGLRQLYAQKLLPLEEHYRFHEFHSPALEDADFDNKPMVLL 63
Query: 101 MGPWSGGKSSIINYLLDNEYSQNSLRTGAEPSPAYFNILSWGESPTILDGTQLAAD--WT 158
+G +S GK++ I +L++ ++ +R G EP+ F + G + ++ G L D
Sbjct: 64 VGQYSTGKTTFIRHLIEQDFP--GMRIGPEPTTDSFIAVMHGPTEGVVPGNALVVDPRRP 121
Query: 159 FSGLQKFGQGLLDRLRGLQLPHPLLEKINIVEIPGILEIRKQ-VERQFPFNDACQWFIDR 217
F L FG L+R QLP+P+L+ I+I++ PGIL KQ + R + F +WF +R
Sbjct: 122 FRKLNAFGNAFLNRFMCAQLPNPVLDSISIIDTPGILSGEKQRISRGYDFAAVLEWFAER 181
Query: 218 ADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRIILNKADQVKPEELMRVQGTLIWNIS 277
D I L++D KLD+ E ++ LK E + R++LNKADQ++ ++LMRV G L+W++
Sbjct: 182 VDRIILLFDAHKLDISDEFSEVIKALKNHEDKIRVVLNKADQIETQQLMRVYGALMWSLG 241
Query: 278 PLMSSSEPPVMYSTSLWSNPYEVGAPIRLLQAQEHAFLRDL----RNAIDKRVENKIASA 333
++++ E +Y S WS+P + +L +A+E +D+ RNA +++ + I A
Sbjct: 242 KIINTPEVVRVYIGSFWSHPLLIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRA 301
Query: 334 RRFAVRVRNHAKMVDCYLTTYYNHKTFFGNRKKVADDIIEHPQDYHIYAGLSTLTNISRY 393
R V HA ++ N +K++ +++ E IY + IS
Sbjct: 302 RLAKV----HAYIISSLKKEMPNVFGKESKKKELVNNLGE------IYQKIEREHQISPG 351
Query: 394 DLPDPEVYRDFFRLNPVFEFK----KLSDTCTYFRGCPINRLDVAI 435
D P+ ++ + +F+ KL DT I RL V +
Sbjct: 352 DFPNLRKMQELLQTQDFSKFQALKPKLLDTVDDMLANDIARLMVMV 397
>sp|Q9NZN4|EHD2_HUMAN EH domain-containing protein 2 OS=Homo sapiens GN=EHD2 PE=1 SV=2
Length = 543
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/396 (30%), Positives = 191/396 (48%), Gaps = 22/396 (5%)
Query: 53 KTIETTLKELKRLYDNAIKPLEITYKYRDLSNRHFADPEIFSKPLVLFMGPWSGGKSSII 112
+ I T LK LY + PLE Y++ + D + KP+VL G +S GK+S I
Sbjct: 16 EAIRTVTSALKELYRTKLLPLEEHYRFGAFHSPALEDADFDGKPMVLVAGQYSTGKTSFI 75
Query: 113 NYLLDNEYSQNSLRTGAEPSPAYFNILSWGESPTILDGTQLAAD--WTFSGLQKFGQGLL 170
YLL+ E + R G EP+ F + G++ + G L D F L FG L
Sbjct: 76 QYLLEQEVPGS--RVGPEPTTDCFVAVMHGDTEGTVPGNALVVDPDKPFRKLNPFGNTFL 133
Query: 171 DRLRGLQLPHPLLEKINIVEIPGILEIRKQ-VERQFPFNDACQWFIDRADIIFLVYDPSK 229
+R QLP+ +LE I+I++ PGIL KQ V R + F +WF +R D+I L++D K
Sbjct: 134 NRFMCAQLPNQVLESISIIDTPGILSGAKQRVSRGYDFPAVLRWFAERVDLIILLFDAHK 193
Query: 230 LDVGPETEAILDQLKGREYQTRIILNKADQVKPEELMRVQGTLIWNISPLMSSSEPPVMY 289
L++ E + L+G E + R++LNKAD V+ ++LMRV G L+W + ++ + E +Y
Sbjct: 194 LEISDEFSEAIGALRGHEDKIRVVLNKADMVETQQLMRVYGALMWALGKVVGTPEVLRVY 253
Query: 290 STSLWSNPYEVGAPIRLLQAQEHAFLRDLRNAIDKRVENKIASARRFAVRVRNHAKMVDC 349
S WS P V RL + +E RD++ K+ + A VR HA
Sbjct: 254 IGSFWSQPLLVPDNRRLFELEEQDLFRDIQGLPRHAALRKLNDLVKRARLVRVHA----- 308
Query: 350 YLTTYYNHK--TFFGNRKKVADDIIEHPQDYHIYAGLSTLTNISRYDLPDPEVYRDFFRL 407
Y+ +Y + + FG K I++ P I+A + +IS D PD + ++
Sbjct: 309 YIISYLKKEMPSVFGKENKKKQLILKLPV---IFAKIQLEHHISPGDFPDCQKMQELLMA 365
Query: 408 NPVFEFKKLSDTCTYFRGCPINRLDVAIAYDLPELV 443
+ +F L + LD + +D+ +L+
Sbjct: 366 HDFTKFHSLKPKL-------LEALDEMLTHDIAKLM 394
>sp|Q9H223|EHD4_HUMAN EH domain-containing protein 4 OS=Homo sapiens GN=EHD4 PE=1 SV=1
Length = 541
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 180/351 (51%), Gaps = 15/351 (4%)
Query: 52 AKTIETTLKELKRLYDNAIKPLEITYKYRDLSNRHFADPEIFSKPLVLFMGPWSGGKSSI 111
A ++T L+ LY + PLE Y++ + + D + +KP++L +G +S GK++
Sbjct: 18 ADAVQTVTGGLRSLYLRKVLPLEEAYRFHEFHSPALEDADFENKPMILLVGQYSTGKTTF 77
Query: 112 INYLLDNEYSQNSLRTGAEPSPAYFNILSWGESPTILDGTQLAAD--WTFSGLQKFGQGL 169
I YLL+ ++ +R G EP+ F + +GE+ G L D F L +FG
Sbjct: 78 IRYLLEQDFP--GMRIGPEPTTDSFIAVMYGETEGSTPGNALVVDPKKPFRKLSRFGNAF 135
Query: 170 LDRLRGLQLPHPLLEKINIVEIPGILEIRKQ-VERQFPFNDACQWFIDRADIIFLVYDPS 228
L+R QLP+ +L+ I++++ PGIL KQ + R + F QWF +R D I L++D
Sbjct: 136 LNRFMCSQLPNQVLKSISVIDSPGILSGEKQRISRGYDFCQVLQWFAERVDRIILLFDAH 195
Query: 229 KLDVGPETEAILDQLKGREYQTRIILNKADQVKPEELMRVQGTLIWNISPLMSSSEPPVM 288
KLD+ E + +G++ + R++LNKADQV ++LMRV G L+W++ ++++ E +
Sbjct: 196 KLDISDEFSEAIKAFRGQDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVINTPEVLRV 255
Query: 289 YSTSLWSNPYEVGAPIRLLQAQEHAFLRDLRNAIDKRVENKIASARRFAVRVRNHAKMVD 348
Y S W+ P + RL +A+ RD+++ K K+ + A + HA
Sbjct: 256 YIGSFWAQPLQNTDNRRLFEAEAQDLFRDIQSLPQKAAVRKLNDLIKRARLAKVHA---- 311
Query: 349 CYLTTYYNHK--TFFGNRKKVADDIIEHPQDYHIYAGLSTLTNISRYDLPD 397
Y+ +Y + + FG K + I P+ IY L IS D P+
Sbjct: 312 -YIISYLKKEMPSVFGKENKKRELISRLPE---IYIQLQREYQISAGDFPE 358
>sp|Q9NZN3|EHD3_HUMAN EH domain-containing protein 3 OS=Homo sapiens GN=EHD3 PE=1 SV=2
Length = 535
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 194/377 (51%), Gaps = 32/377 (8%)
Query: 77 YKYRDLSNRHFADPEIFSKPLVLFMGPWSGGKSSIINYLLDNEYSQNSLRTGAEPSPAYF 136
Y++ + + D + +KP+VL +G +S GK++ I YLL+ ++ +R G EP+ F
Sbjct: 40 YRFHEFHSPALEDADFDNKPMVLLVGQYSTGKTTFIRYLLEQDFP--GMRIGPEPTTDSF 97
Query: 137 NILSWGESPTILDGTQLAAD--WTFSGLQKFGQGLLDRLRGLQLPHPLLEKINIVEIPGI 194
+ G+ I+ G L D F L FG L+R QLP+P+LE I++++ PGI
Sbjct: 98 IAVMQGDMEGIIPGNALVVDPKKPFRKLNAFGNAFLNRFVCAQLPNPVLESISVIDTPGI 157
Query: 195 LEIRKQ-VERQFPFNDACQWFIDRADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRII 253
L KQ + R + F +WF +R D I L++D KLD+ E ++ LK E + R++
Sbjct: 158 LSGEKQRISRGYDFAAVLEWFAERVDRIILLFDAHKLDISDEFSEVIKALKNHEDKMRVV 217
Query: 254 LNKADQVKPEELMRVQGTLIWNISPLMSSSEPPVMYSTSLWSNPYEVGAPIRLLQAQEHA 313
LNKADQ++ ++LMRV G L+W++ ++++ E +Y S WS+P + +L +A+E
Sbjct: 218 LNKADQIETQQLMRVYGALMWSLGKIVNTPEVIRVYIGSFWSHPLLIPDNRKLFEAEEQD 277
Query: 314 FLRDL----RNAIDKRVENKIASARRFAVRVRNHAKMVDCYLTTYYNHKTFFG---NRKK 366
RD+ RNA +++ + I AR V HA ++ + + FG +K+
Sbjct: 278 LFRDIQSLPRNAALRKLNDLIKRARLAKV----HAYIIS---SLKKEMPSVFGKDNKKKE 330
Query: 367 VADDIIEHPQDYHIYAGLSTLTNISRYDLPDPEVYRDFFRLNPVFEFKKLSDTCTYFRGC 426
+ +++ E IY + IS D P+ + +D + +F+ L
Sbjct: 331 LVNNLAE------IYGRIEREHQISPGDFPNLKRMQDQLQAQDFSKFQPLKSKL------ 378
Query: 427 PINRLDVAIAYDLPELV 443
+ +D +A+D+ +L+
Sbjct: 379 -LEVVDDMLAHDIAQLM 394
>sp|Q9QXY6|EHD3_MOUSE EH domain-containing protein 3 OS=Mus musculus GN=Ehd3 PE=1 SV=2
Length = 535
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 193/377 (51%), Gaps = 32/377 (8%)
Query: 77 YKYRDLSNRHFADPEIFSKPLVLFMGPWSGGKSSIINYLLDNEYSQNSLRTGAEPSPAYF 136
Y++ + + D + +KP+VL +G +S GK++ I YLL+ ++ +R G EP+ F
Sbjct: 40 YRFHEFHSPALEDADFDNKPMVLLVGQYSTGKTTFIRYLLEQDFP--GMRIGPEPTTDSF 97
Query: 137 NILSWGESPTILDGTQLAAD--WTFSGLQKFGQGLLDRLRGLQLPHPLLEKINIVEIPGI 194
+ G+ I+ G L D F L FG L+R QLP+ +LE I++++ PGI
Sbjct: 98 IAVMQGDVEGIIPGNALVVDPKKPFRKLNAFGNAFLNRFVCAQLPNAVLESISVIDTPGI 157
Query: 195 LEIRKQ-VERQFPFNDACQWFIDRADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRII 253
L KQ + R + F +WF +R D I L++D KLD+ E ++ LK E + R++
Sbjct: 158 LSGEKQRISRGYDFAAVLEWFAERVDRIILLFDAHKLDISDEFSEVIKALKNHEDKMRVV 217
Query: 254 LNKADQVKPEELMRVQGTLIWNISPLMSSSEPPVMYSTSLWSNPYEVGAPIRLLQAQEHA 313
LNKADQ++ ++LMRV G L+W++ ++++ E +Y S WS+P + +L +A+E
Sbjct: 218 LNKADQIETQQLMRVYGALMWSLGKIVNTPEVIRVYIGSFWSHPLLIPDNRKLFEAEEQD 277
Query: 314 FLRDL----RNAIDKRVENKIASARRFAVRVRNHAKMVDCY---LTTYYNHKTFFGNRKK 366
RD+ RNA +++ + I AR V HA ++ + + + T +K+
Sbjct: 278 LFRDIQSLPRNAALRKLNDLIKRARLAKV----HAYIISSLKKEMPSVFGKDT---KKKE 330
Query: 367 VADDIIEHPQDYHIYAGLSTLTNISRYDLPDPEVYRDFFRLNPVFEFKKLSDTCTYFRGC 426
+ +++ E IY + IS D P+ + +D + +F+ L
Sbjct: 331 LVNNLAE------IYGRIEREHQISPGDFPNLKRMQDQLQAQDFSKFQPLKSKL------ 378
Query: 427 PINRLDVAIAYDLPELV 443
+ +D +A+D+ +L+
Sbjct: 379 -LEVVDDMLAHDIAQLM 394
>sp|Q8R491|EHD3_RAT EH domain-containing protein 3 OS=Rattus norvegicus GN=Ehd3 PE=1
SV=2
Length = 535
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 193/377 (51%), Gaps = 32/377 (8%)
Query: 77 YKYRDLSNRHFADPEIFSKPLVLFMGPWSGGKSSIINYLLDNEYSQNSLRTGAEPSPAYF 136
Y++ + + D + +KP+VL +G +S GK++ I YLL+ ++ +R G EP+ F
Sbjct: 40 YRFHEFHSPALEDADFDNKPMVLLVGQYSTGKTTFIRYLLEQDFP--GMRIGPEPTTDSF 97
Query: 137 NILSWGESPTILDGTQLAAD--WTFSGLQKFGQGLLDRLRGLQLPHPLLEKINIVEIPGI 194
+ G+ I+ G L D F L FG L+R QLP+ +LE I++++ PGI
Sbjct: 98 IAVMQGDVEGIIPGNALVVDPKKPFRKLNAFGNAFLNRFVCAQLPNAVLESISVIDTPGI 157
Query: 195 LEIRKQ-VERQFPFNDACQWFIDRADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRII 253
L KQ + R + F +WF +R D I L++D KLD+ E ++ LK E + R++
Sbjct: 158 LSGEKQRISRGYDFAAVLEWFAERVDRIILLFDAHKLDISDEFSEVIKALKNHEDKMRVV 217
Query: 254 LNKADQVKPEELMRVQGTLIWNISPLMSSSEPPVMYSTSLWSNPYEVGAPIRLLQAQEHA 313
LNKADQ++ ++LMRV G L+W++ ++++ E +Y S WS+P + +L +A+E
Sbjct: 218 LNKADQIETQQLMRVYGALMWSLGKIVNTPEVIRVYIGSFWSHPLLIPDNRKLFEAEEQD 277
Query: 314 FLRDL----RNAIDKRVENKIASARRFAVRVRNHAKMVDCY---LTTYYNHKTFFGNRKK 366
+D+ RNA +++ + I AR V HA ++ + + + T +K+
Sbjct: 278 LFKDIQSLPRNAALRKLNDLIKRARLAKV----HAYIISSLKKEMPSVFGKDT---KKKE 330
Query: 367 VADDIIEHPQDYHIYAGLSTLTNISRYDLPDPEVYRDFFRLNPVFEFKKLSDTCTYFRGC 426
+ +++ E IY + IS D P+ + +D + +F+ L
Sbjct: 331 LVNNLAE------IYGRIEREHQISPGDFPNLKRMQDQLQAQDFSKFQPLKSKL------ 378
Query: 427 PINRLDVAIAYDLPELV 443
+ +D +A+D+ +L+
Sbjct: 379 -LEVVDDMLAHDIAQLM 394
>sp|Q92R46|ERA_RHIME GTPase Era OS=Rhizobium meliloti (strain 1021) GN=era PE=3 SV=1
Length = 313
Score = 39.7 bits (91), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 185 KINIVEIPGILEIRKQVERQFPFNDACQWFIDR-ADIIFLVYDPSKLDVGPETEAILDQL 243
+I ++ PGI + R++++R W + AD+I L+ D S+ + + EAIL+ L
Sbjct: 70 QIVFMDTPGIFKPRRRLDRAMV---TTAWGGAKDADLIMLLID-SERGIKGDAEAILEGL 125
Query: 244 KGREYQTRIILNKADQVKPEELMRV 268
K ++LNK DQV+ E+L+++
Sbjct: 126 KEVHQPKVLVLNKVDQVRREDLLKL 150
>sp|Q8UGK1|ERA_AGRT5 GTPase Era OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
GN=era PE=3 SV=1
Length = 317
Score = 38.9 bits (89), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 185 KINIVEIPGILEIRKQVERQFPFNDACQWFIDR-ADIIFLVYDPSKLDVGPETEAILDQL 243
+I ++ PGI + R++++R W + AD+I L+ D S+ + + EAIL+ L
Sbjct: 73 QIVFMDTPGIFKPRRRLDRAMV---TSAWGGAKDADLILLLID-SERGLKGDAEAILEGL 128
Query: 244 KGREYQTRIILNKADQVKPEELMRV 268
K + + LNK DQVK E+L+++
Sbjct: 129 KDVPQKKILCLNKIDQVKREDLLKL 153
>sp|A6U7A9|ERA_SINMW GTPase Era OS=Sinorhizobium medicae (strain WSM419) GN=era PE=3
SV=1
Length = 310
Score = 37.0 bits (84), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 185 KINIVEIPGILEIRKQVERQFPFNDACQWFIDR-ADIIFLVYDPSKLDVGPETEAILDQL 243
+I ++ PGI + R++++R W + AD+I L+ D S+ + + + IL+ L
Sbjct: 67 QIVFMDTPGIFKPRRRLDRAMV---TTAWGGAKDADLIMLLID-SERGIKGDADTILEGL 122
Query: 244 KGREYQTRIILNKADQVKPEELMRV 268
K ++LNK DQV+ E+L+++
Sbjct: 123 KDVHQPKVLVLNKVDQVRREDLLKL 147
>sp|Q2NB82|ERA_ERYLH GTPase Era OS=Erythrobacter litoralis (strain HTCC2594) GN=era PE=3
SV=1
Length = 304
Score = 36.2 bits (82), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 188 IVEIPGILEIRKQVERQFPFNDACQWFIDRADIIFLVYDPSKLDVGPETEAILDQLKGRE 247
+V+ PGI R++++R A + AD + L+ DP K E E +L+ LK R
Sbjct: 64 LVDTPGIFAPRRRLDR--AMVSAAWEGAESADAVLLLVDPVK-QRRHELEPLLESLKDRP 120
Query: 248 YQTRIILNKADQVKPEELM 266
+ ++LNK D K E L+
Sbjct: 121 ERKILVLNKVDVAKKEPLL 139
>sp|Q8YG75|ERA_BRUME GTPase Era OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=era PE=3 SV=1
Length = 311
Score = 35.8 bits (81), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 173 LRGLQLPHPLLEKINIVEIPGILEIRKQVERQFPFNDACQWFIDR-ADIIFLVYDPSKLD 231
+RG+ + P +I +V+ PGI +++++R W + ADII ++ D ++
Sbjct: 58 VRGIFIEGP--AQIVLVDTPGIFRPKRRLDRAMV---TTAWGGAKDADIILVIID-AQGG 111
Query: 232 VGPETEAILDQLKGREYQTRIILNKADQVKPEELM 266
EA+L+ +K + ++LNK D+V P L+
Sbjct: 112 FNENAEALLESMKDVRQKKVLVLNKVDRVDPPVLL 146
>sp|Q8G1P9|ERA_BRUSU GTPase Era OS=Brucella suis biovar 1 (strain 1330) GN=era PE=3 SV=1
Length = 311
Score = 35.8 bits (81), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 173 LRGLQLPHPLLEKINIVEIPGILEIRKQVERQFPFNDACQWFIDR-ADIIFLVYDPSKLD 231
+RG+ + P +I +V+ PGI +++++R W + ADII ++ D ++
Sbjct: 58 VRGIFIEGP--AQIVLVDTPGIFRPKRRLDRAMV---TTAWGGAKDADIILVIID-AQGG 111
Query: 232 VGPETEAILDQLKGREYQTRIILNKADQVKPEELM 266
EA+L+ +K + ++LNK D+V P L+
Sbjct: 112 FNENAEALLESMKDVRQKKVLVLNKVDRVDPPVLL 146
>sp|Q6PW23|MX_EPICO Interferon-induced GTP-binding protein Mx OS=Epinephelus coioides
GN=mx PE=2 SV=1
Length = 626
Score = 35.4 bits (80), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 27/165 (16%)
Query: 96 PLVLFMGPWSGGKSSIINYLLDNEYSQNS-----------LRTGAEPSPAYFNILSWG-- 142
P + +G S GKSS++ L + S ++ E Y I G
Sbjct: 34 PAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLELKMKRKKEGEEWYGKISYRGCE 93
Query: 143 ---ESPTILDGTQLAADWTFSGLQKFGQGLLDRLRGLQLPHPLLEKINIVEIPGILEIR- 198
E P+ ++ A +G+ G G+ D L L++ P + + ++++PGI +
Sbjct: 94 KELEDPSDVENKIREAQDEMAGV---GVGISDDLISLEIASPDVPDLTLIDLPGIARVAV 150
Query: 199 ----KQVERQFPFNDACQWFIDRADIIFLVYDPSKLDVGPETEAI 239
+ + +Q Q FI R + I LV P +D+ TEA+
Sbjct: 151 KGQPEDIGKQ--IKGLIQRFITRQETISLVVVPCNVDIAT-TEAL 192
>sp|Q985A5|ERA_RHILO GTPase Era OS=Rhizobium loti (strain MAFF303099) GN=era PE=3 SV=1
Length = 310
Score = 35.4 bits (80), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 185 KINIVEIPGILEIRKQVERQFPFNDACQWFIDR-ADIIFLVYDPSKLDVGPETEAILDQL 243
+I V+ PGI + +++++ W + ADI+ L+ D + + + +AIL++L
Sbjct: 67 QIVFVDTPGIFKPKRRLDTAMV---TTAWGGAKDADIVLLLIDAER-GIRGDADAILERL 122
Query: 244 KGREYQTRIILNKADQVKPEELM 266
K +ILNK D+VK E L+
Sbjct: 123 KDVRQPMALILNKVDRVKHETLL 145
>sp|Q7VN98|TIG_HAEDU Trigger factor OS=Haemophilus ducreyi (strain 35000HP / ATCC
700724) GN=tig PE=3 SV=1
Length = 433
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 90/196 (45%), Gaps = 21/196 (10%)
Query: 152 QLAADWTFSG-LQKFGQGLLDRLRGLQLPHPLLEKINIVEIPGILEIRKQVERQFPFNDA 210
QL D++F+ + F + L L +++ P++E I +I ++E+ ++ + + +DA
Sbjct: 98 QLGQDFSFTATFEVFPEVELKGLENIEVEKPVVE-ITTADIDKMIEVLRKQQATWAESDA 156
Query: 211 CQWFIDRADIIFLVY-DPSKLDVGPETEAILDQLKGR---EYQTRIILNKA------DQV 260
DR I F+ Y D ++ + G TE L+ +G ++ I+ +KA D
Sbjct: 157 AATANDRVIIDFVGYIDGAEFEGGKATEFTLNMGQGSMIPGFEEGIVGHKAGEQFDIDVT 216
Query: 261 KPEE-----LMRVQGTLIWNISPLMSSSEPPVMYSTSLWSNPYEVGAPIRLLQAQ-EHAF 314
PEE L ++ + + P + T + + + L+A+ E
Sbjct: 217 FPEEYHAENLKGKAAKFAITLNKVENMILPEL---TEEFVKKFGTAKTVEELRAEIEKNM 273
Query: 315 LRDLRNAIDKRVENKI 330
R+L+NA+ R++N++
Sbjct: 274 QRELKNAVTARIKNQV 289
>sp|B1KSM8|EFG_CLOBM Elongation factor G OS=Clostridium botulinum (strain Loch Maree /
Type A3) GN=fusA PE=3 SV=1
Length = 689
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 185 KINIVEIPGILEIRKQVERQFPFNDACQWFIDRADIIFLVYDPSKLDVGPETEAILDQLK 244
++NI++ PG ++ +VER D +D +K V P+TE + Q
Sbjct: 77 QVNIIDTPGHVDFTVEVERSLRVLDGAVTILD-----------AKSGVEPQTETVWRQAD 125
Query: 245 GREYQTRIILNKADQVKPEELMRVQGTL 272
+ + +NK D++ + LM V GTL
Sbjct: 126 NYKVPRMVFINKMDKLGADFLMSV-GTL 152
>sp|C1FMV4|EFG_CLOBJ Elongation factor G OS=Clostridium botulinum (strain Kyoto / Type
A2) GN=fusA PE=3 SV=1
Length = 689
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 185 KINIVEIPGILEIRKQVERQFPFNDACQWFIDRADIIFLVYDPSKLDVGPETEAILDQLK 244
++NI++ PG ++ +VER D +D +K V P+TE + Q
Sbjct: 77 QVNIIDTPGHVDFTVEVERSLRVLDGAVTILD-----------AKSGVEPQTETVWRQAD 125
Query: 245 GREYQTRIILNKADQVKPEELMRVQGTL 272
+ + +NK D++ + LM V GTL
Sbjct: 126 NYKVPRMVFINKMDKLGADFLMSV-GTL 152
>sp|A5I7K9|EFG_CLOBH Elongation factor G OS=Clostridium botulinum (strain Hall / ATCC
3502 / NCTC 13319 / Type A) GN=fusA PE=3 SV=1
Length = 689
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 185 KINIVEIPGILEIRKQVERQFPFNDACQWFIDRADIIFLVYDPSKLDVGPETEAILDQLK 244
++NI++ PG ++ +VER D +D +K V P+TE + Q
Sbjct: 77 QVNIIDTPGHVDFTVEVERSLRVLDGAVTILD-----------AKSGVEPQTETVWRQAD 125
Query: 245 GREYQTRIILNKADQVKPEELMRVQGTL 272
+ + +NK D++ + LM V GTL
Sbjct: 126 NYKVPRMVFINKMDKLGADFLMSV-GTL 152
>sp|A7FZ72|EFG_CLOB1 Elongation factor G OS=Clostridium botulinum (strain ATCC 19397 /
Type A) GN=fusA PE=3 SV=1
Length = 689
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 185 KINIVEIPGILEIRKQVERQFPFNDACQWFIDRADIIFLVYDPSKLDVGPETEAILDQLK 244
++NI++ PG ++ +VER D +D +K V P+TE + Q
Sbjct: 77 QVNIIDTPGHVDFTVEVERSLRVLDGAVTILD-----------AKSGVEPQTETVWRQAD 125
Query: 245 GREYQTRIILNKADQVKPEELMRVQGTL 272
+ + +NK D++ + LM V GTL
Sbjct: 126 NYKVPRMVFINKMDKLGADFLMSV-GTL 152
>sp|A7GJ77|EFG_CLOBL Elongation factor G OS=Clostridium botulinum (strain Langeland /
NCTC 10281 / Type F) GN=fusA PE=3 SV=1
Length = 689
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 185 KINIVEIPGILEIRKQVERQFPFNDACQWFIDRADIIFLVYDPSKLDVGPETEAILDQLK 244
++NI++ PG ++ +VER D +D +K V P+TE + Q
Sbjct: 77 QVNIIDTPGHVDFTVEVERSLRVLDGAVTILD-----------AKSGVEPQTETVWRQAD 125
Query: 245 GREYQTRIILNKADQVKPEELMRVQGTL 272
+ + +NK D++ + LM V GTL
Sbjct: 126 NYKVPRMVFINKMDKLGADFLMSV-GTL 152
>sp|B1IGF7|EFG_CLOBK Elongation factor G OS=Clostridium botulinum (strain Okra / Type
B1) GN=fusA PE=3 SV=1
Length = 689
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 185 KINIVEIPGILEIRKQVERQFPFNDACQWFIDRADIIFLVYDPSKLDVGPETEAILDQLK 244
++NI++ PG ++ +VER D +D +K V P+TE + Q
Sbjct: 77 QVNIIDTPGHVDFTVEVERSLRVLDGAVTILD-----------AKSGVEPQTETVWRQAD 125
Query: 245 GREYQTRIILNKADQVKPEELMRVQGTL 272
+ + +NK D++ + LM V GTL
Sbjct: 126 NYKVPRMVFINKMDKLGADFLMSV-GTL 152
>sp|C3KVQ4|EFG_CLOB6 Elongation factor G OS=Clostridium botulinum (strain 657 / Type
Ba4) GN=fusA PE=3 SV=1
Length = 689
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 185 KINIVEIPGILEIRKQVERQFPFNDACQWFIDRADIIFLVYDPSKLDVGPETEAILDQLK 244
++NI++ PG ++ +VER D +D +K V P+TE + Q
Sbjct: 77 QVNIIDTPGHVDFTVEVERSLRVLDGAVTILD-----------AKSGVEPQTETVWRQAD 125
Query: 245 GREYQTRIILNKADQVKPEELMRVQGTL 272
+ + +NK D++ + LM V GTL
Sbjct: 126 NYKVPRMVFINKMDKLGADFLMSV-GTL 152
>sp|O94622|YBKD_SCHPO Uncharacterized alpha-1,2-galactosyltransferase C1289.13c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC1289.13c PE=3 SV=1
Length = 375
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 15/74 (20%)
Query: 354 YYNHKTFFGNRKKVADDIIEHPQDYHIYAGLSTLTNISRYDLPDPEV-YRDFFRLNPVFE 412
Y H F ++ ++ I HP H + GL TL +I+ YD DP Y D
Sbjct: 274 YKEHNGVFVEQQALSHMIYSHPI-VHKHVGLVTLRSINAYDSSDPAWGYED--------- 323
Query: 413 FKKLSDTCTYFRGC 426
D C +F GC
Sbjct: 324 ----GDLCVHFAGC 333
>sp|Q12099|FAL1_YEAST ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=FAL1 PE=1 SV=1
Length = 399
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 27/216 (12%)
Query: 239 ILDQLKGREYQTR----IILNKADQVKPEELMRVQGTLIWNISPLMSSSEPPVMYSTSLW 294
+LD +K + QTR ++L++AD++ E L Q I++I + + V+ S ++
Sbjct: 153 VLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQ--IYDIFAKLPKNCQVVVVSATMN 210
Query: 295 SNPYEVGAPIRLLQAQEHAFLRDLRNAIDKRVENKIASARRFAVRVRNHA----KMVDCY 350
+ EV F+ D + KR E + +++ V V + D Y
Sbjct: 211 KDILEV----------TRKFMNDPVKILVKRDEISLEGIKQYVVNVDKEEWKFDTLCDIY 260
Query: 351 LTTYYNHKTFFGNRKKVADDIIEHPQDYHIYAGLSTLTNISRYDLPDPEVYRDFFRLNPV 410
+ F N KK D + + + +A +S ++ + + +V DF
Sbjct: 261 DSLTITQCVIFCNTKKKVDWLSQRLIQSN-FAVVSMHGDMKQEE--RDKVMNDF----RT 313
Query: 411 FEFKKLSDTCTYFRGCPINRLDVAIAYDLPELVGKY 446
+ L T + RG + ++ + I YDLPE++ Y
Sbjct: 314 GHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENY 349
>sp|A6ZXY5|FAL1_YEAS7 ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=FAL1 PE=3 SV=1
Length = 399
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 27/216 (12%)
Query: 239 ILDQLKGREYQTR----IILNKADQVKPEELMRVQGTLIWNISPLMSSSEPPVMYSTSLW 294
+LD +K + QTR ++L++AD++ E L Q I++I + + V+ S ++
Sbjct: 153 VLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQ--IYDIFAKLPKNCQVVVVSATMN 210
Query: 295 SNPYEVGAPIRLLQAQEHAFLRDLRNAIDKRVENKIASARRFAVRVRNHA----KMVDCY 350
+ EV F+ D + KR E + +++ V V + D Y
Sbjct: 211 KDILEV----------TRKFMNDPVKILVKRDEISLEGIKQYVVNVDKEEWKFDTLCDIY 260
Query: 351 LTTYYNHKTFFGNRKKVADDIIEHPQDYHIYAGLSTLTNISRYDLPDPEVYRDFFRLNPV 410
+ F N KK D + + + +A +S ++ + + +V DF
Sbjct: 261 DSLTITQCVIFCNTKKKVDWLSQRLIQSN-FAVVSMHGDMKQEE--RDKVMNDF----RT 313
Query: 411 FEFKKLSDTCTYFRGCPINRLDVAIAYDLPELVGKY 446
+ L T + RG + ++ + I YDLPE++ Y
Sbjct: 314 GHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENY 349
>sp|Q0T208|DER_SHIF8 GTPase Der OS=Shigella flexneri serotype 5b (strain 8401) GN=der
PE=3 SV=1
Length = 490
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 215 IDRADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRIILNKADQVKPEE 264
I+ AD++ + D ++ + P EAI L+ RE T +++NK D + P++
Sbjct: 79 IEEADVVLFMVD-ARAGLMPADEAIAKHLRSREKPTFLVVNKTDGLDPDQ 127
>sp|Q5UQD2|PNKP_MIMIV Putative bifunctional polynucleotide phosphatase/kinase
OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L469 PE=3
SV=1
Length = 421
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
Query: 95 KPLVLFMGPWSGGKSSII-NYLLDNEY---SQNSLRTGAEPSPAYFNILSWGESPTILDG 150
K +++ +G GKS + NY+L N Y +Q+ +T A+ N LS G+S ++D
Sbjct: 258 KEMIVMIGQPGSGKSFFVKNYILPNGYVHINQDKCKTKAKCLSETENALSKGKS-VVIDN 316
Query: 151 TQ--LAADWTFSGLQKFGQGLLDRLRG--LQLPHPLLEKINIVE-------IPGILEIRK 199
T + + T++ L K + D +R ++ P L + +N V +P + +I
Sbjct: 317 TNPDVISRMTYTNLAK--ENNYDHVRAIIMETPDELAKHLNNVRHIYSSGTVPKVTDIAY 374
Query: 200 QVERQFPFNDACQWFIDRADIIFLVYDPSKLD 231
+ R+ + D+ + + +D S LD
Sbjct: 375 NIYRKNFVLPQYEENFDKIETVTFYFDKSMLD 406
>sp|A5EKL6|ERA_BRASB GTPase Era OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
GN=era PE=3 SV=1
Length = 308
Score = 33.5 bits (75), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 185 KINIVEIPGILEIRKQVERQFPFNDACQWFIDRADIIFLVYDPSKLDVGPETEAILDQLK 244
+I +V+ PGI +++++R A D AD++ ++ D K + E +AI+D+
Sbjct: 64 QIILVDTPGIFSPKRRLDRAM-VTTAWSGAHD-ADLVCVLLDAKK-GLDDEAQAIIDKAA 120
Query: 245 GREYQTRIILNKADQVKPEELM 266
+Q +++NK D V E+L+
Sbjct: 121 AVAHQKILVVNKVDLVPREKLL 142
>sp|Q8REN3|EX7L_FUSNN Exodeoxyribonuclease 7 large subunit OS=Fusobacterium nucleatum
subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM
8532 / LMG 13131) GN=xseA PE=3 SV=1
Length = 404
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 14/95 (14%)
Query: 234 PETEAILDQLKGRE-YQTRIILNKADQVKPEELMRVQGTLIWNISPLMSSSEPPVMYSTS 292
PE E++L+ LK RE Y T+++ + D +K E L+R++ + N ++S +
Sbjct: 263 PEKESLLEDLKAREIYITKLLKSYVDSMKRELLLRIENYYLKNFPNTVNSLRESI----- 317
Query: 293 LWSNPYEVGAPIRLLQAQEHAFLRDLRNAIDKRVE 327
V I+L +A E +F+ RN + +++
Sbjct: 318 -------VEKEIQLKEAME-SFIEQKRNIFENKID 344
>sp|B1HTJ0|ERA_LYSSC GTPase Era OS=Lysinibacillus sphaericus (strain C3-41) GN=era PE=3
SV=1
Length = 305
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 220 IIFLVYDPSKLDVGPETEAILDQLKGREYQTRIILNKADQVKPEELMRV 268
I+F+V KL G E IL+ L G +++NK DQ+ P+EL+ +
Sbjct: 93 IMFMVNAEQKL--GKGDEFILEMLAGNSTPVFLVINKIDQIHPDELLGI 139
>sp|P03311|POLG_FMDVS Genome polyprotein (Fragments) OS=Foot-and-mouth disease virus
(strain C1-Santa Pau) PE=1 SV=1
Length = 861
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 232 VGPETEAILDQLKGREYQTRIILNKADQVKPEELMRVQGTLIWNISPL 279
VGPE EA L ++ REY+ D+++P E +R T I ++ P+
Sbjct: 530 VGPEAEAALKLMEKREYKFACQTFLKDEIRPMEKVRAGKTRIVDVLPV 577
>sp|Q8FF59|DER_ECOL6 GTPase Der OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 /
UPEC) GN=der PE=3 SV=2
Length = 490
Score = 32.7 bits (73), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 215 IDRADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRIILNKADQVKPEE 264
I+ AD++ + D ++ + P EAI L+ RE T ++ NK D + P++
Sbjct: 79 IEEADVVLFMVD-ARAGLMPADEAIAKHLRSREKPTFLVANKTDGLDPDQ 127
>sp|Q0TEX4|DER_ECOL5 GTPase Der OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC)
GN=der PE=3 SV=1
Length = 490
Score = 32.7 bits (73), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 215 IDRADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRIILNKADQVKPEE 264
I+ AD++ + D ++ + P EAI L+ RE T ++ NK D + P++
Sbjct: 79 IEEADVVLFMVD-ARAGLMPADEAIAKHLRSREKPTFLVANKTDGLDPDQ 127
>sp|B7NQW0|DER_ECO7I GTPase Der OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=der
PE=3 SV=1
Length = 490
Score = 32.7 bits (73), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 215 IDRADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRIILNKADQVKPEE 264
I+ AD++ + D ++ + P EAI L+ RE T ++ NK D + P++
Sbjct: 79 IEEADVVLFMVD-ARAGLMPADEAIAKHLRSREKPTFLVANKTDGLDPDQ 127
>sp|B7LKC7|DER_ESCF3 GTPase Der OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698
/ CDC 0568-73) GN=der PE=3 SV=1
Length = 490
Score = 32.7 bits (73), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 215 IDRADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRIILNKADQVKPEE 264
I+ AD++ + D ++ + P EAI L+ RE T ++ NK D + P++
Sbjct: 79 IEEADVVLFMVD-ARAGLMPADEAIAKHLRSREKPTFLVANKTDGLDPDQ 127
>sp|B1LNG6|DER_ECOSM GTPase Der OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=der PE=3
SV=1
Length = 490
Score = 32.7 bits (73), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 215 IDRADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRIILNKADQVKPEE 264
I+ AD++ + D ++ + P EAI L+ RE T ++ NK D + P++
Sbjct: 79 IEEADVVLFMVD-ARAGLMPADEAIAKHLRSREKPTFLVANKTDGLDPDQ 127
>sp|B7N699|DER_ECOLU GTPase Der OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
GN=der PE=3 SV=1
Length = 490
Score = 32.7 bits (73), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 215 IDRADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRIILNKADQVKPEE 264
I+ AD++ + D ++ + P EAI L+ RE T ++ NK D + P++
Sbjct: 79 IEEADVVLFMVD-ARAGLMPADEAIAKHLRSREKPTFLVANKTDGLDPDQ 127
>sp|P03306|POLG_FMDV1 Genome polyprotein OS=Foot-and-mouth disease virus (strain A10-61)
PE=1 SV=2
Length = 2332
Score = 32.7 bits (73), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 232 VGPETEAILDQLKGREYQTRIILNKADQVKPEELMRVQGTLIWNISPL 279
VGPE EA L ++ REY+ D+++P E +R T I ++ P+
Sbjct: 2001 VGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRAGKTRIVDVLPV 2048
>sp|Q5HZI1|MTUS1_MOUSE Microtubule-associated tumor suppressor 1 homolog OS=Mus musculus
GN=Mtus1 PE=1 SV=2
Length = 1210
Score = 32.7 bits (73), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 11 AQRLQTQKQEDIEIPDNLRDKRHVHGILKLDEEFKEEEELLAKTIETTLKELKRLYDNAI 70
A++ +TQ QE DNL + H L+++ E+ ELL KT ET+L E+K+ ++
Sbjct: 966 AEKYKTQLQEQF---DNL-NAAHETTKLEIEASHSEKVELLKKTYETSLSEIKKSHEMEK 1021
Query: 71 KPLE 74
K LE
Sbjct: 1022 KSLE 1025
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 180,458,622
Number of Sequences: 539616
Number of extensions: 8026824
Number of successful extensions: 28163
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 28062
Number of HSP's gapped (non-prelim): 172
length of query: 468
length of database: 191,569,459
effective HSP length: 121
effective length of query: 347
effective length of database: 126,275,923
effective search space: 43817745281
effective search space used: 43817745281
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)