Diaphorina citri psyllid: psy13475

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------47

MKIREERKKIAQRLQTQKQEDIEIPDNLRDKRHVHGILKLDEEFKEEEELLAKTIETTLKELKRLYDNAIKPLEITYKYRDLSNRHFADPEIFSKPLVLFMGPWSGGKSSIINYLLDNEYSQNSLRTGAEPSPAYFNILSWGESPTILDGTQLAADWTFSGLQKFGQGLLDRLRGLQLPHPLLEKINIVEIPGILEIRKQVERQFPFNDACQWFIDRADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRIILNKADQVKPEELMRVQGTLIWNISPLMSSSEPPVMYSTSLWSNPYEVGAPIRLLQAQEHAFLRDLRNAIDKRVENKIASARRFAVRVRNHAKMVDCYLTTYYNHKTFFGNRKKVADDIIEHPQDYHIYAGLSTLTNISRYDLPDPEVYRDFFRLNPVFEFKKLSDTCTYFRGCPINRLDVAIAYDLPELVGKYKKSAETLLKAHKEAKEKAVPAS

ccHHHHHHHHHHHHHHccccccccccccccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccccccccccccccccEEEEEccccccHHHHHHHHHccccccccccccccccccEEEEEEccccccccccccccccccccHHHHHcccccccccCECcccccccccEEEcccccHHHHHHHcccccHHHHHHHHHHcccEEEEEEccccccccHHHHHHHHHHHcccccEEEEECccccccHHHHHHHHHHHHHHHccccccccccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHcccHHHHHHHHHccccHHHHHHHHHHHccccccccccHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc

******************************************E*KEEEELLAKTIETTLKELKRLYDNAIKPLEITYKYRDLSNRHFADPEIFSKPLVLFMGPWSGGKSSIINYLLDNEYSQNSLRTGAEPSPAYFNILSWGESPTILDGTQLAADWTFSGLQKFGQGLLDRLRGLQLPHPLLEKINIVEIPGILEIRKQVERQFPFNDACQWFIDRADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRIILNKADQVKPEELMRVQGTLIWNISPLMSSSEPPVMYSTSLWSNPYEVGAPIRLLQAQEHAFLRDLRNAIDKRVENKIASARRFAVRVRNHAKMVDCYLTTYYNHKTFFGNRKKVADDIIEHPQDYHIYAGLSTLTNISRYDLPDPEVYRDFFRLNPVFEFKKLSDTCTYFRGCPINRLDVAIAYDLPELVGKYK*********************

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MKIREERKKIAQRLQTQKQEDIEIPDNLRDKRHVHGILKLDEEFxxxxxxxxxxxxxxxxxxxxxYDNAIKPLEITYKYRDLSNRHFADPEIFSKPLVLFMGPWSGGKSSIINYLLDNEYSQNSLRTGAEPSPAYFNILSWGESPTILDGTQLAADWTFSGLQKFGQGLLDRLRGLQLPHPLLEKINIVEIPGILEIRKQVERQFPFNDACQWFIDRADIIFLVYDPSKLDVGPETEAILDQLKGREYQTRIILNKADQVKPEELMRVQGTLIWNISPLMSSSEPPVMYSTSLWSNPYEVGAPIRLLQAQEHAFLRDLRNAIDKRVENKIASARRFAVRVRNHAKMVDCYLTTYYNHKTFFGNRKKVADDIIEHPQDYHIYAGLSTLTNISRYDLPDPEVYRDFFRLNPVFEFKKLSDTCTYFRGCPINRLDVAIAYDLPELVGKYKKSAETLLKAHKEAKEKAVPAS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Sarcalumenin	May be involved in the regulation of calcium transport.	confident	Q90577

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0003924 [MF]	GTPase activity	probable	GO:0016787, GO:0016818, GO:0003824, GO:0017111, GO:0016817, GO:0016462, GO:0003674
GO:0019904 [MF]	protein domain specific binding	probable	GO:0003674, GO:0005488, GO:0005515
GO:0006897 [BP]	endocytosis	probable	GO:0006810, GO:0008150, GO:0016192, GO:0051234, GO:0051179
GO:0016197 [BP]	endosomal transport	probable	GO:0009987, GO:0046907, GO:0006810, GO:0044765, GO:0008150, GO:0051649, GO:0044763, GO:0051234, GO:0051179, GO:0044699, GO:0051641
GO:0005525 [MF]	GTP binding	probable	GO:0043168, GO:0003674, GO:0005488, GO:0019001, GO:0035639, GO:0097159, GO:1901363, GO:0043167, GO:0036094, GO:0032561, GO:0032553, GO:0001883, GO:0032549, GO:0032555, GO:0017076, GO:0000166, GO:0032550, GO:1901265, GO:0001882
GO:0048471 [CC]	perinuclear region of cytoplasm	probable	GO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0030866 [BP]	cortical actin cytoskeleton organization	probable	GO:0006996, GO:0007010, GO:0030029, GO:0071840, GO:0009987, GO:0030865, GO:0044763, GO:0030036, GO:0008150, GO:0044699, GO:0016043
GO:0055038 [CC]	recycling endosome membrane	probable	GO:0005737, GO:0005575, GO:0031090, GO:0043227, GO:0055037, GO:0016020, GO:0044464, GO:0043229, GO:0005623, GO:0043231, GO:0044446, GO:0044444, GO:0044440, GO:0044424, GO:0005622, GO:0005768, GO:0043226, GO:0044422, GO:0010008
GO:0005886 [CC]	plasma membrane	probable	GO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2QPT, chain A
Confidence level:very confident
Coverage over the Query: 56-151,168-450
View the alignment between query and template
View the model in PyMOL

Template: 3GEH, chain A
Confidence level:confident
Coverage over the Query: 26-75,90-126,166-190,213-264
View the alignment between query and template
View the model in PyMOL