Query psy13477
Match_columns 295
No_of_seqs 164 out of 554
Neff 4.6
Searched_HMMs 29240
Date Fri Aug 16 20:23:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13477.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13477hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q6k_A 43.2 kDa salivary prote 100.0 3.7E-59 1.3E-63 450.6 19.1 196 52-294 2-211 (381)
2 2qe8_A Uncharacterized protein 99.9 5.7E-24 1.9E-28 193.7 17.0 149 85-287 17-171 (343)
3 2p9w_A MAL S 1 allergenic prot 98.3 3.9E-06 1.3E-10 80.0 12.4 150 82-273 10-169 (334)
4 3fvz_A Peptidyl-glycine alpha- 97.4 0.0053 1.8E-07 54.7 15.7 139 85-279 91-234 (329)
5 3dsm_A Uncharacterized protein 97.4 0.0085 2.9E-07 53.7 16.7 122 85-277 44-166 (328)
6 1q7f_A NHL, brain tumor CG1071 97.4 0.0053 1.8E-07 52.4 14.5 127 85-279 30-158 (286)
7 1rwi_B Serine/threonine-protei 97.2 0.0035 1.2E-07 52.7 11.6 119 85-278 67-186 (270)
8 2p4o_A Hypothetical protein; p 97.2 0.018 6.1E-07 50.9 16.4 117 85-274 32-149 (306)
9 1q7f_A NHL, brain tumor CG1071 97.1 0.015 5.2E-07 49.6 14.8 123 85-279 77-201 (286)
10 3dsm_A Uncharacterized protein 97.1 0.0025 8.6E-08 57.2 10.2 82 153-275 175-256 (328)
11 3fvz_A Peptidyl-glycine alpha- 97.1 0.0035 1.2E-07 55.8 10.8 89 148-273 22-122 (329)
12 2qc5_A Streptogramin B lactona 97.1 0.017 5.7E-07 48.6 14.1 119 85-278 20-139 (300)
13 2z2n_A Virginiamycin B lyase; 97.0 0.018 6.1E-07 48.5 14.1 120 84-278 98-218 (299)
14 2z2n_A Virginiamycin B lyase; 97.0 0.026 9E-07 47.4 15.1 119 85-278 141-260 (299)
15 1npe_A Nidogen, entactin; glyc 96.8 0.064 2.2E-06 45.9 16.3 122 85-280 122-246 (267)
16 1pjx_A Dfpase, DIISOPROPYLFLUO 96.7 0.008 2.7E-07 51.5 9.7 74 151-273 227-300 (314)
17 3v64_C Agrin; beta propeller, 96.6 0.077 2.6E-06 48.7 16.2 121 85-279 159-282 (349)
18 2fp8_A Strictosidine synthase; 96.6 0.0068 2.3E-07 53.7 8.7 85 149-279 79-181 (322)
19 3dr2_A Exported gluconolactona 96.6 0.024 8.3E-07 49.7 12.0 131 84-274 85-226 (305)
20 2iwa_A Glutamine cyclotransfer 96.6 0.026 8.9E-07 51.5 12.6 78 152-277 23-100 (266)
21 3e5z_A Putative gluconolactona 96.5 0.015 5.1E-07 50.2 9.8 123 84-279 27-168 (296)
22 3v65_B Low-density lipoprotein 96.4 0.069 2.4E-06 49.7 14.4 121 85-279 202-325 (386)
23 1npe_A Nidogen, entactin; glyc 96.4 0.15 5E-06 43.6 15.4 123 85-278 79-204 (267)
24 3vgz_A Uncharacterized protein 96.3 0.052 1.8E-06 46.7 12.3 83 151-277 42-125 (353)
25 3p5b_L Low density lipoprotein 96.3 0.086 2.9E-06 49.4 14.5 121 85-277 202-325 (400)
26 3mbr_X Glutamine cyclotransfer 96.3 0.11 3.7E-06 47.1 14.6 124 83-279 63-186 (243)
27 1ijq_A LDL receptor, low-densi 96.3 0.12 3.9E-06 46.5 14.8 123 85-279 120-245 (316)
28 3m0c_C LDL receptor, low-densi 96.2 0.11 3.8E-06 54.0 15.8 122 86-279 515-639 (791)
29 2qc5_A Streptogramin B lactona 96.1 0.046 1.6E-06 45.9 10.5 80 149-279 19-98 (300)
30 3sov_A LRP-6, low-density lipo 96.1 0.2 6.8E-06 45.6 15.3 122 84-279 121-245 (318)
31 3vgz_A Uncharacterized protein 96.0 0.075 2.6E-06 45.7 11.8 64 183-279 206-269 (353)
32 1rwi_B Serine/threonine-protei 96.0 0.015 5.2E-07 48.7 7.0 77 151-278 25-102 (270)
33 2dg1_A DRP35, lactonase; beta 96.0 0.048 1.6E-06 47.4 10.3 79 151-279 46-128 (333)
34 3v65_B Low-density lipoprotein 96.0 0.13 4.6E-06 47.7 13.9 118 85-274 159-279 (386)
35 3g4e_A Regucalcin; six bladed 95.9 0.17 5.9E-06 44.1 13.8 128 85-274 54-184 (297)
36 2iwa_A Glutamine cyclotransfer 95.9 0.22 7.4E-06 45.4 14.9 118 85-277 21-140 (266)
37 3v64_C Agrin; beta propeller, 95.9 0.14 4.9E-06 46.8 13.7 118 85-274 116-236 (349)
38 3u4y_A Uncharacterized protein 95.9 0.093 3.2E-06 45.1 11.6 37 239-279 223-259 (331)
39 3g4e_A Regucalcin; six bladed 95.9 0.073 2.5E-06 46.5 11.1 83 149-279 148-236 (297)
40 2fp8_A Strictosidine synthase; 95.8 0.054 1.9E-06 47.8 10.2 84 152-273 231-314 (322)
41 3nok_A Glutaminyl cyclase; bet 95.8 0.11 3.9E-06 47.9 12.5 125 82-279 93-217 (268)
42 4hw6_A Hypothetical protein, I 95.7 0.046 1.6E-06 52.1 10.0 110 145-278 134-266 (433)
43 3m0c_C LDL receptor, low-densi 95.7 0.18 6.3E-06 52.3 14.9 123 85-279 471-596 (791)
44 3tc9_A Hypothetical hydrolase; 95.6 0.029 1E-06 53.2 8.2 109 145-277 132-262 (430)
45 3mbr_X Glutamine cyclotransfer 95.6 0.1 3.4E-06 47.3 11.2 107 151-278 22-139 (243)
46 1pjx_A Dfpase, DIISOPROPYLFLUO 95.6 0.048 1.6E-06 46.6 8.7 130 85-278 18-167 (314)
47 2dg1_A DRP35, lactonase; beta 95.5 0.12 4.3E-06 44.7 11.1 125 86-278 46-177 (333)
48 3p5b_L Low density lipoprotein 95.5 0.35 1.2E-05 45.2 14.8 122 85-278 159-283 (400)
49 3nol_A Glutamine cyclotransfer 95.4 0.17 5.9E-06 46.4 12.1 123 84-279 86-208 (262)
50 3nol_A Glutamine cyclotransfer 95.3 0.086 2.9E-06 48.4 9.9 43 151-204 44-86 (262)
51 1ijq_A LDL receptor, low-densi 95.3 0.79 2.7E-05 41.0 16.1 124 84-277 29-156 (316)
52 2p4o_A Hypothetical protein; p 95.3 0.12 4.2E-06 45.5 10.5 40 150-202 32-71 (306)
53 2ghs_A AGR_C_1268P; regucalcin 95.2 0.76 2.6E-05 40.8 15.4 120 86-273 91-213 (326)
54 3dr2_A Exported gluconolactona 95.1 0.06 2E-06 47.1 7.9 81 152-279 88-185 (305)
55 3sre_A PON1, serum paraoxonase 95.0 0.38 1.3E-05 45.4 13.7 167 80-272 44-252 (355)
56 3e5z_A Putative gluconolactona 95.0 0.11 3.7E-06 44.7 9.0 79 149-279 27-106 (296)
57 3sov_A LRP-6, low-density lipo 94.9 0.57 1.9E-05 42.6 14.1 115 86-272 80-197 (318)
58 1jmx_B Amine dehydrogenase; ox 94.7 0.19 6.5E-06 43.0 9.9 72 158-277 8-79 (349)
59 1n7d_A LDL receptor, low-densi 94.7 0.11 3.8E-06 52.6 9.7 82 149-279 539-621 (699)
60 3hrp_A Uncharacterized protein 94.7 0.17 5.7E-06 47.4 10.1 80 148-278 129-209 (409)
61 3hrp_A Uncharacterized protein 94.6 0.21 7.2E-06 46.7 10.5 85 149-271 322-409 (409)
62 3s94_A LRP-6, low-density lipo 94.6 1.3 4.5E-05 44.2 16.9 117 85-275 435-554 (619)
63 3hfq_A Uncharacterized protein 94.5 0.43 1.5E-05 41.6 11.7 82 150-277 141-225 (347)
64 3sjl_D Methylamine dehydrogena 94.5 0.14 4.9E-06 49.0 9.3 81 159-279 290-370 (386)
65 1n7d_A LDL receptor, low-densi 94.4 0.82 2.8E-05 46.3 15.0 149 83-273 404-572 (699)
66 4a0p_A LRP6, LRP-6, low-densit 94.2 0.96 3.3E-05 45.4 15.1 120 85-280 123-245 (628)
67 3hfq_A Uncharacterized protein 94.2 0.44 1.5E-05 41.4 11.1 49 238-290 287-337 (347)
68 3tc9_A Hypothetical hydrolase; 94.0 0.23 7.9E-06 47.0 9.6 74 151-272 227-301 (430)
69 3c75_H MADH, methylamine dehyd 94.0 0.19 6.6E-06 48.5 9.1 129 93-276 83-213 (426)
70 2mad_H Methylamine dehydrogena 93.9 0.67 2.3E-05 42.9 12.4 82 156-278 273-356 (373)
71 4a0p_A LRP6, LRP-6, low-densit 93.9 1.3 4.5E-05 44.4 15.3 121 85-279 80-203 (628)
72 3s94_A LRP-6, low-density lipo 93.9 1.4 5E-05 44.0 15.6 118 85-274 392-512 (619)
73 3u4y_A Uncharacterized protein 93.8 0.37 1.3E-05 41.3 9.7 67 159-275 8-74 (331)
74 1pby_B Quinohemoprotein amine 93.6 1.5 5.2E-05 36.9 13.1 58 183-279 260-317 (337)
75 3qqz_A Putative uncharacterize 93.3 0.71 2.4E-05 41.7 11.1 75 151-275 28-103 (255)
76 2qe8_A Uncharacterized protein 93.3 0.89 3E-05 40.6 11.6 85 151-277 18-107 (343)
77 3bws_A Protein LP49; two-domai 93.2 0.91 3.1E-05 40.4 11.6 80 151-279 171-250 (433)
78 3c75_H MADH, methylamine dehyd 93.1 0.26 9E-06 47.6 8.4 83 155-278 324-408 (426)
79 1jmx_B Amine dehydrogenase; ox 93.0 0.28 9.6E-06 41.9 7.6 122 87-274 2-136 (349)
80 2ghs_A AGR_C_1268P; regucalcin 93.0 0.58 2E-05 41.6 9.9 74 84-197 48-123 (326)
81 1l0q_A Surface layer protein; 93.0 1.4 4.8E-05 38.6 12.3 78 152-279 34-112 (391)
82 1l0q_A Surface layer protein; 93.0 2.3 7.7E-05 37.2 13.6 59 183-279 224-282 (391)
83 2oiz_A Aromatic amine dehydrog 92.6 0.34 1.2E-05 44.1 8.0 91 154-278 54-146 (361)
84 4hw6_A Hypothetical protein, I 92.6 0.35 1.2E-05 46.0 8.4 73 151-271 229-303 (433)
85 3nok_A Glutaminyl cyclase; bet 92.4 0.39 1.3E-05 44.3 8.1 103 152-277 57-169 (268)
86 2ism_A Putative oxidoreductase 92.3 0.75 2.5E-05 42.2 10.0 82 148-273 29-115 (352)
87 1pby_B Quinohemoprotein amine 91.9 0.95 3.2E-05 38.2 9.5 60 183-277 11-70 (337)
88 2mad_H Methylamine dehydrogena 91.7 1.5 5E-05 40.6 11.3 46 154-202 70-116 (373)
89 3scy_A Hypothetical bacterial 91.6 2.7 9.4E-05 36.7 12.4 80 151-278 156-248 (361)
90 3kya_A Putative phosphatase; s 91.6 0.22 7.7E-06 49.3 5.9 113 145-276 134-289 (496)
91 3no2_A Uncharacterized protein 91.3 1.4 4.7E-05 38.8 10.2 124 87-280 39-163 (276)
92 1nir_A Nitrite reductase; hemo 91.1 1.9 6.5E-05 41.9 11.9 39 237-279 324-362 (543)
93 3kya_A Putative phosphatase; s 90.6 2 6.8E-05 42.6 11.6 122 86-271 187-340 (496)
94 3qqz_A Putative uncharacterize 90.5 8.5 0.00029 34.5 14.8 116 87-269 29-150 (255)
95 3hxj_A Pyrrolo-quinoline quino 90.2 1.1 3.8E-05 38.2 8.3 9 93-101 106-114 (330)
96 3bws_A Protein LP49; two-domai 90.2 3.6 0.00012 36.5 11.9 59 183-279 283-341 (433)
97 1ri6_A Putative isomerase YBHE 90.2 2.8 9.6E-05 35.4 10.8 78 152-277 40-120 (343)
98 1cru_A Protein (soluble quinop 90.2 1.6 5.5E-05 41.9 10.3 87 147-273 24-124 (454)
99 3hxj_A Pyrrolo-quinoline quino 89.7 1.4 4.7E-05 37.6 8.5 86 183-281 157-253 (330)
100 2oiz_A Aromatic amine dehydrog 89.5 3.4 0.00012 37.3 11.4 78 156-278 260-342 (361)
101 2ism_A Putative oxidoreductase 89.5 3.7 0.00013 37.5 11.7 81 86-195 32-117 (352)
102 1ri6_A Putative isomerase YBHE 89.5 6.8 0.00023 32.9 12.6 30 238-271 232-261 (343)
103 3q7m_A Lipoprotein YFGL, BAMB; 89.3 4.9 0.00017 35.5 12.1 77 160-279 53-130 (376)
104 1jof_A Carboxy-CIS,CIS-muconat 88.9 3.5 0.00012 36.6 10.9 77 151-274 146-228 (365)
105 3scy_A Hypothetical bacterial 88.9 2.9 0.0001 36.5 10.2 49 237-289 306-356 (361)
106 3sjl_D Methylamine dehydrogena 88.3 1.5 5E-05 42.0 8.5 85 94-203 44-129 (386)
107 2p9w_A MAL S 1 allergenic prot 88.0 3.5 0.00012 39.0 10.8 140 84-273 62-216 (334)
108 3a9g_A Putative uncharacterize 87.9 1.9 6.5E-05 39.7 8.7 82 148-273 27-115 (354)
109 1mda_H Methylamine dehydrogena 87.1 1.5 5E-05 41.3 7.5 71 160-277 31-110 (368)
110 1nir_A Nitrite reductase; hemo 86.9 4.5 0.00015 39.2 11.1 81 152-279 181-264 (543)
111 3q7m_A Lipoprotein YFGL, BAMB; 85.0 11 0.00038 33.2 11.9 69 159-280 102-171 (376)
112 1mda_H Methylamine dehydrogena 84.6 1.2 4.3E-05 41.8 5.7 79 155-278 269-352 (368)
113 3no2_A Uncharacterized protein 83.8 7.3 0.00025 34.0 10.1 74 154-279 129-203 (276)
114 1qks_A Cytochrome CD1 nitrite 83.1 16 0.00054 36.1 13.1 38 236-277 341-378 (567)
115 2ece_A 462AA long hypothetical 82.3 6.3 0.00021 39.0 9.8 84 151-275 139-240 (462)
116 2g8s_A Glucose/sorbosone dehyd 81.2 2.8 9.6E-05 38.4 6.5 84 148-273 16-108 (353)
117 1jof_A Carboxy-CIS,CIS-muconat 80.8 5.8 0.0002 35.2 8.3 36 237-276 145-181 (365)
118 1qks_A Cytochrome CD1 nitrite 80.7 5.6 0.00019 39.3 8.9 67 157-274 163-231 (567)
119 3ott_A Two-component system se 80.6 8.2 0.00028 38.3 10.1 113 151-281 147-269 (758)
120 3hx6_A Type 4 fimbrial biogene 79.6 5.9 0.0002 40.2 8.7 65 181-274 221-286 (570)
121 3ott_A Two-component system se 79.4 7.3 0.00025 38.7 9.3 34 151-196 473-506 (758)
122 4a2l_A BT_4663, two-component 78.7 8 0.00027 38.6 9.4 80 150-279 498-578 (795)
123 1kb0_A Quinohemoprotein alcoho 76.6 8.9 0.0003 38.4 9.0 63 184-279 139-207 (677)
124 4a2l_A BT_4663, two-component 76.0 19 0.00064 35.9 11.1 78 151-279 544-621 (795)
125 3das_A Putative oxidoreductase 75.9 5.7 0.0002 37.3 7.0 74 85-170 140-222 (347)
126 2ad6_A Methanol dehydrogenase 74.2 14 0.00047 36.3 9.5 63 183-279 125-193 (571)
127 4ggc_A P55CDC, cell division c 72.0 22 0.00074 29.5 9.0 60 184-279 46-105 (318)
128 3s9j_A Member of DUF4221 famil 71.9 10 0.00034 36.1 7.7 63 184-279 53-117 (369)
129 3v9f_A Two-component system se 70.8 37 0.0013 33.7 11.8 127 87-280 68-200 (781)
130 3das_A Putative oxidoreductase 70.5 23 0.00079 33.1 9.7 86 147-272 29-116 (347)
131 2hz6_A Endoplasmic reticulum t 70.1 4.9 0.00017 36.6 4.9 56 184-279 20-76 (369)
132 3odt_A Protein DOA1; ubiquitin 69.8 29 0.00098 28.5 9.3 53 184-275 247-299 (313)
133 3amr_A 3-phytase; beta-propell 67.7 19 0.00067 34.2 8.7 31 240-271 232-262 (355)
134 3a9g_A Putative uncharacterize 67.1 15 0.0005 33.7 7.5 74 85-170 135-218 (354)
135 3v9f_A Two-component system se 67.0 23 0.0008 35.1 9.5 80 150-279 495-575 (781)
136 1kv9_A Type II quinohemoprotei 66.9 20 0.00068 35.7 9.0 63 184-280 128-196 (668)
137 1yiq_A Quinohemoprotein alcoho 66.3 27 0.00091 35.0 9.8 58 183-279 455-513 (689)
138 2g8s_A Glucose/sorbosone dehyd 65.4 22 0.00075 32.3 8.3 80 84-170 129-218 (353)
139 1yiq_A Quinohemoprotein alcoho 64.9 24 0.00081 35.4 9.1 63 183-279 131-200 (689)
140 1sq9_A Antiviral protein SKI8; 63.4 18 0.0006 31.3 6.9 21 183-203 313-333 (397)
141 1kb0_A Quinohemoprotein alcoho 62.6 19 0.00065 36.0 7.9 58 183-279 457-515 (677)
142 2ece_A 462AA long hypothetical 62.5 52 0.0018 32.4 10.8 87 163-278 30-125 (462)
143 1kv9_A Type II quinohemoprotei 61.9 36 0.0012 33.8 9.8 58 183-279 438-496 (668)
144 2ojh_A Uncharacterized protein 59.0 39 0.0013 27.1 7.9 58 182-279 21-79 (297)
145 4a9v_A PHOX; hydrolase, beta-p 58.3 45 0.0015 34.0 9.7 55 147-202 473-528 (592)
146 1w6s_A Methanol dehydrogenase 57.3 39 0.0013 33.6 9.1 63 183-279 131-199 (599)
147 2ojh_A Uncharacterized protein 56.4 75 0.0026 25.4 9.2 34 152-198 44-78 (297)
148 3amr_A 3-phytase; beta-propell 55.9 16 0.00055 34.8 5.7 58 184-274 51-112 (355)
149 1cru_A Protein (soluble quinop 55.3 27 0.00093 33.3 7.3 78 84-170 143-248 (454)
150 3mmy_A MRNA export factor; mRN 54.5 84 0.0029 26.2 9.5 39 152-202 89-127 (368)
151 1gxr_A ESG1, transducin-like e 54.0 50 0.0017 27.3 7.9 57 184-279 206-262 (337)
152 1flg_A Protein (quinoprotein e 54.0 67 0.0023 31.5 10.1 65 184-279 79-144 (582)
153 4gga_A P55CDC, cell division c 52.9 59 0.002 29.0 8.8 60 184-279 126-185 (420)
154 2ynn_A Coatomer subunit beta'; 52.1 1.1E+02 0.0037 25.9 10.4 42 151-204 15-56 (304)
155 2aq5_A Coronin-1A; WD40 repeat 51.6 35 0.0012 30.1 7.0 34 237-274 268-301 (402)
156 3zwl_B Eukaryotic translation 51.5 1.1E+02 0.0036 25.6 9.7 17 263-279 295-311 (369)
157 1k8k_C P40, ARP2/3 complex 41 51.3 53 0.0018 27.8 7.8 36 238-280 246-283 (372)
158 1flg_A Protein (quinoprotein e 50.5 36 0.0012 33.5 7.4 57 184-279 467-524 (582)
159 2ad6_A Methanol dehydrogenase 49.4 40 0.0014 32.9 7.6 58 183-279 444-502 (571)
160 2vdu_B TRNA (guanine-N(7)-)-me 48.9 90 0.0031 28.1 9.4 38 238-279 104-143 (450)
161 3vl1_A 26S proteasome regulato 48.4 1.1E+02 0.0037 26.6 9.5 58 184-279 162-219 (420)
162 3q6k_A 43.2 kDa salivary prote 47.0 1.9E+02 0.0066 27.4 11.9 143 87-269 89-252 (381)
163 4aez_A CDC20, WD repeat-contai 46.5 1.2E+02 0.0042 26.6 9.8 60 183-278 327-386 (401)
164 3odt_A Protein DOA1; ubiquitin 46.3 81 0.0028 25.7 8.0 57 184-279 206-262 (313)
165 2ovr_B FBW7, F-BOX/WD repeat p 46.3 95 0.0033 27.6 9.0 35 238-279 364-398 (445)
166 2vdu_B TRNA (guanine-N(7)-)-me 46.2 83 0.0028 28.3 8.7 78 183-273 262-342 (450)
167 1got_B GT-beta; complex (GTP-b 45.8 83 0.0028 27.2 8.4 35 238-277 228-262 (340)
168 3vu4_A KMHSV2; beta-propeller 44.8 66 0.0023 28.2 7.7 80 184-275 82-171 (355)
169 3zwl_B Eukaryotic translation 44.3 1.4E+02 0.0047 24.9 11.0 79 151-279 34-112 (369)
170 1fwx_A Nitrous oxide reductase 43.8 32 0.0011 34.9 6.0 24 251-274 287-310 (595)
171 3ow8_A WD repeat-containing pr 43.5 1.6E+02 0.0054 25.4 10.2 58 184-279 187-244 (321)
172 1w6s_A Methanol dehydrogenase 42.8 55 0.0019 32.5 7.5 57 184-279 454-511 (599)
173 4gqb_B Methylosome protein 50; 42.8 50 0.0017 29.3 6.6 18 262-279 279-296 (344)
174 2hqs_A Protein TOLB; TOLB, PAL 41.8 1.1E+02 0.0036 27.8 8.7 26 254-279 237-263 (415)
175 1sq9_A Antiviral protein SKI8; 40.1 96 0.0033 26.6 7.8 72 183-279 258-329 (397)
176 3ei3_B DNA damage-binding prot 39.9 1.4E+02 0.0047 25.7 8.8 53 183-272 330-382 (383)
177 3mkq_A Coatomer beta'-subunit; 39.7 1.4E+02 0.0047 28.7 9.6 78 152-279 16-93 (814)
178 3gre_A Serine/threonine-protei 39.5 2E+02 0.0067 25.3 11.9 63 184-279 237-299 (437)
179 3k26_A Polycomb protein EED; W 39.3 1.1E+02 0.0036 25.6 7.8 59 184-279 96-154 (366)
180 3gre_A Serine/threonine-protei 38.2 99 0.0034 27.2 7.7 59 183-277 192-250 (437)
181 1gxr_A ESG1, transducin-like e 36.7 1.7E+02 0.006 23.9 10.9 58 184-279 164-221 (337)
182 2pm9_A Protein WEB1, protein t 35.6 55 0.0019 28.3 5.5 20 184-203 189-208 (416)
183 2pm9_A Protein WEB1, protein t 35.0 99 0.0034 26.6 7.1 32 239-274 308-339 (416)
184 4ery_A WD repeat-containing pr 34.8 2E+02 0.0068 23.9 8.8 79 151-279 67-145 (312)
185 4gga_A P55CDC, cell division c 34.6 2.4E+02 0.0083 24.9 10.1 22 258-279 339-360 (420)
186 4ery_A WD repeat-containing pr 34.6 1.4E+02 0.0048 24.9 7.8 36 239-279 195-230 (312)
187 4gqb_B Methylosome protein 50; 33.9 62 0.0021 28.7 5.7 17 184-200 150-166 (344)
188 4a11_B DNA excision repair pro 33.8 81 0.0028 26.9 6.2 57 183-277 314-370 (408)
189 4g56_B MGC81050 protein; prote 32.9 59 0.002 28.7 5.3 18 262-279 291-308 (357)
190 3frx_A Guanine nucleotide-bind 32.8 1.8E+02 0.0061 24.8 8.4 20 184-203 88-107 (319)
191 4ggc_A P55CDC, cell division c 32.4 2E+02 0.007 23.4 8.7 17 184-200 265-281 (318)
192 3c5m_A Oligogalacturonate lyas 32.3 1.2E+02 0.004 25.9 7.1 18 182-199 167-184 (396)
193 3vl1_A 26S proteasome regulato 32.3 2.4E+02 0.0084 24.2 10.8 20 184-203 204-223 (420)
194 4aez_A CDC20, WD repeat-contai 31.4 2.7E+02 0.0091 24.4 12.7 58 183-278 284-342 (401)
195 1r5m_A SIR4-interacting protei 31.4 2.4E+02 0.0082 23.9 9.8 36 238-279 291-326 (425)
196 2ovr_B FBW7, F-BOX/WD repeat p 31.2 1.7E+02 0.0058 26.0 8.2 58 184-273 383-443 (445)
197 4g56_B MGC81050 protein; prote 31.1 47 0.0016 29.3 4.4 20 184-203 162-181 (357)
198 4aow_A Guanine nucleotide-bind 31.0 90 0.0031 25.9 5.9 22 183-204 237-258 (340)
199 4fp5_D LT-IIB, heat-labIle ent 30.5 55 0.0019 25.4 4.0 33 253-286 23-57 (98)
200 1vyh_C Platelet-activating fac 30.3 99 0.0034 27.7 6.5 58 184-279 319-376 (410)
201 1p22_A F-BOX/WD-repeat protein 29.9 2.9E+02 0.01 24.4 10.0 21 183-203 276-296 (435)
202 1got_B GT-beta; complex (GTP-b 29.9 1.5E+02 0.0051 25.5 7.4 59 183-279 164-222 (340)
203 1qb5_D Protein (heat labIle en 29.7 57 0.0019 25.4 4.0 33 253-286 23-57 (99)
204 2pbi_B Guanine nucleotide-bind 29.6 1.5E+02 0.0051 25.9 7.4 19 183-201 220-238 (354)
205 3lrv_A PRE-mRNA-splicing facto 29.5 1.2E+02 0.0042 26.0 6.7 54 184-274 150-203 (343)
206 3frx_A Guanine nucleotide-bind 29.2 2.6E+02 0.0091 23.7 9.3 56 184-279 219-274 (319)
207 3v7d_B Cell division control p 29.1 1.8E+02 0.0061 25.8 7.9 18 183-200 290-307 (464)
208 4a11_B DNA excision repair pro 28.6 1.6E+02 0.0055 24.9 7.2 21 184-204 123-143 (408)
209 1k8k_C P40, ARP2/3 complex 41 28.3 2.4E+02 0.0083 23.5 8.3 74 152-275 11-86 (372)
210 1erj_A Transcriptional repress 28.0 2.2E+02 0.0074 25.1 8.2 19 184-202 188-206 (393)
211 3ow8_A WD repeat-containing pr 27.8 2.5E+02 0.0087 24.0 8.5 21 184-204 103-123 (321)
212 3iht_A S-adenosyl-L-methionine 27.2 19 0.00065 31.3 1.0 30 4-33 7-50 (174)
213 2pbi_B Guanine nucleotide-bind 27.0 3E+02 0.01 23.8 9.0 20 184-203 177-196 (354)
214 3k26_A Polycomb protein EED; W 26.9 2.7E+02 0.0093 23.0 8.3 67 184-279 45-111 (366)
215 3v7d_B Cell division control p 26.7 2.5E+02 0.0084 24.8 8.4 57 184-279 143-199 (464)
216 1r5m_A SIR4-interacting protei 26.2 75 0.0026 27.1 4.7 32 238-274 332-363 (425)
217 2ynn_A Coatomer subunit beta'; 26.2 2.6E+02 0.0088 23.5 8.1 19 261-279 248-266 (304)
218 3i2n_A WD repeat-containing pr 25.9 1.5E+02 0.0052 24.6 6.5 18 184-201 191-208 (357)
219 2xyi_A Probable histone-bindin 25.3 2.6E+02 0.0088 25.0 8.3 33 237-273 278-310 (430)
220 1xfd_A DIP, dipeptidyl aminope 25.2 2.9E+02 0.01 26.2 9.1 86 152-279 63-150 (723)
221 2z3z_A Dipeptidyl aminopeptida 24.8 2.8E+02 0.0097 26.3 8.9 76 150-279 82-162 (706)
222 3iz6_a 40S ribosomal protein R 24.6 3.5E+02 0.012 23.6 9.7 65 184-279 272-336 (380)
223 3dw8_B Serine/threonine-protei 24.4 3.2E+02 0.011 23.6 8.6 81 152-275 180-261 (447)
224 2oaj_A Protein SNI1; WD40 repe 24.2 1.8E+02 0.0061 29.9 7.8 53 184-275 80-132 (902)
225 3pe7_A Oligogalacturonate lyas 24.1 2.5E+02 0.0084 24.0 7.7 16 183-198 168-183 (388)
226 4aow_A Guanine nucleotide-bind 24.1 2.7E+02 0.0092 22.9 7.7 17 184-200 196-212 (340)
227 4h5i_A Guanine nucleotide-exch 24.0 2.8E+02 0.0094 24.4 8.2 73 152-273 272-344 (365)
228 2xdw_A Prolyl endopeptidase; a 23.6 1.6E+02 0.0053 28.7 6.9 16 259-274 401-416 (710)
229 1vyh_C Platelet-activating fac 23.5 2.8E+02 0.0097 24.6 8.2 59 183-279 214-272 (410)
230 2hqs_A Protein TOLB; TOLB, PAL 23.5 4E+02 0.014 23.9 10.4 28 252-279 279-307 (415)
231 3sre_A PON1, serum paraoxonase 23.2 1.2E+02 0.0042 28.1 5.9 24 80-103 107-135 (355)
232 2aq5_A Coronin-1A; WD40 repeat 22.8 1.8E+02 0.0062 25.4 6.6 59 184-278 155-213 (402)
233 4e54_B DNA damage-binding prot 22.7 82 0.0028 28.3 4.4 16 262-277 420-435 (435)
234 1k32_A Tricorn protease; prote 22.7 1.8E+02 0.0062 29.8 7.5 79 152-274 559-639 (1045)
235 1p22_A F-BOX/WD-repeat protein 22.5 2.1E+02 0.0071 25.4 7.1 18 184-201 154-171 (435)
236 3vu4_A KMHSV2; beta-propeller 22.1 2.4E+02 0.0082 24.5 7.3 32 238-274 242-273 (355)
237 3l48_A Outer membrane usher pr 22.0 1.2E+02 0.0041 23.2 4.6 28 252-279 42-69 (94)
238 3i2n_A WD repeat-containing pr 21.9 3.4E+02 0.012 22.4 8.8 66 184-279 140-206 (357)
239 3sfz_A APAF-1, apoptotic pepti 21.9 3.2E+02 0.011 28.0 9.1 81 151-279 659-739 (1249)
240 3sfz_A APAF-1, apoptotic pepti 20.7 4.8E+02 0.016 26.7 10.2 80 150-279 616-695 (1249)
No 1
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=100.00 E-value=3.7e-59 Score=450.61 Aligned_cols=196 Identities=26% Similarity=0.458 Sum_probs=180.2
Q ss_pred ceEEEEEeeceeeCCCHHHHHhhhcCCCCCCCCCceeeeEE--eCCcEEEEeccCCCCCCcEEEEEeCCCCC---CCCCc
Q psy13477 52 LQQVFQWRALDFEYPSEEIRQYAKFTKDFVPENNLPVGIEV--WRNKLFVTVPRWEDGVPSTLNYIPLDAAT---SSSPN 126 (295)
Q Consensus 52 l~~vy~Wk~ldf~~ps~~~r~~ai~~g~Yip~n~~p~gi~v--~~gRiFvT~PR~~~gvP~TL~~i~~~~~~---~~sP~ 126 (295)
++++||||++||+ |+.+|.|+|+|++|+||++ ++||+|||+|||++|+|+||++|..+... ..+|.
T Consensus 2 ~~~~~~Wk~ld~~---------ai~~g~y~p~n~~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ 72 (381)
T 3q6k_A 2 DTQGYKWKQLLYN---------NVTPGSYNPDNMISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSP 72 (381)
T ss_dssp CCEEEEESSCCBT---------TSCTTSSCGGGCCCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSC
T ss_pred cceEEEEEeeccc---------cccCCCcccCccceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcc
Confidence 6899999999998 9999999999999999999 79999999999999999999999864321 24788
Q ss_pred c-ccCCCccccCCCCCCCCCCCccEEEeEEEEcCCCcEEEEeCCCCCCCCCccc---cCCceEEEEECCCC--cEEEEEE
Q psy13477 127 L-IPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCDRLWVLDSGTVGIGNTTKQ---ICPYAIHVFDLKTD--RRIRKYQ 200 (295)
Q Consensus 127 l-~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~rLWVLDtG~~~~~~~~~~---~~~pKLvvfDL~td--~lir~y~ 200 (295)
| +||||| .+|++|+|||+++||+||||||||+|.++.++.+.| .|+|||++|||+|| +++|+|+
T Consensus 73 ll~PYP~w----------~~~~~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~ 142 (381)
T 3q6k_A 73 LLNKFSGH----------KTGKELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYY 142 (381)
T ss_dssp CBEECTTC----------SSSCSSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEE
T ss_pred cccCCCCC----------ccccceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEE
Confidence 8 999998 168999999999999999999999999999888788 99999999999999 9999999
Q ss_pred cCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccC---CCCCeEEEEEcCCCCeEEEEEcCCCeEEE
Q psy13477 201 FRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGK---NCEDTFLYASDELAYGLLSYSWEENTSWR 277 (295)
Q Consensus 201 ~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~---~c~~~~aYItD~~~~gLIVydl~~~~swR 277 (295)
||++ +++++|+|+||+||+.. +|+++||||||++.+||||||+++|++||
T Consensus 143 ~p~~---------------------------~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swR 195 (381)
T 3q6k_A 143 FPTR---------------------------LVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWN 195 (381)
T ss_dssp CCGG---------------------------GCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCHH---------------------------hcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEE
Confidence 9998 78889999999999532 69999999999999999999999999999
Q ss_pred EecCCcccCCCCCCccc
Q psy13477 278 ASHGFFFPDPLLVPYKE 294 (295)
Q Consensus 278 v~h~~f~pdp~~~~f~~ 294 (295)
++|++|+|| .++.|+|
T Consensus 196 v~~~~~~pd-~~~~~~i 211 (381)
T 3q6k_A 196 VTHPTFKAE-RPTKFDY 211 (381)
T ss_dssp EECGGGSCC-SCEEEEE
T ss_pred EccCCCccc-cCcceEE
Confidence 999999999 6667765
No 2
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.91 E-value=5.7e-24 Score=193.72 Aligned_cols=149 Identities=21% Similarity=0.339 Sum_probs=129.9
Q ss_pred CceeeeEEe-CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCCcE
Q psy13477 85 NLPVGIEVW-RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCDRL 163 (295)
Q Consensus 85 ~~p~gi~v~-~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~rL 163 (295)
+.|.||+++ +||+||+.|||..|+ .+|.++. + +.++|||+|+. ..|.++.++++|.+|+||+|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~-~~l~~~~-~------g~~~~~p~~~~--------~~~~~~~~p~gv~~d~~g~L 80 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPE-MQVAELT-Q------DGLIPFPPQSG--------NAIITFDTVLGIKSDGNGIV 80 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCS-CSEEEEE-T------TEEEESCCCCS--------SCCCCCSCEEEEEECSSSEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCc-eEEEEEC-C------CCeecCCCccc--------CcccceeEeeEEEEcCCCcE
Confidence 579999998 999999999998887 8999998 3 36899999872 24678999999999999999
Q ss_pred EEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEE
Q psy13477 164 WVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIA 243 (295)
Q Consensus 164 WVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~ 243 (295)
||+|+|. .+.|.++|++||++|+++++++.++.. ...+.+++++|+
T Consensus 81 ~v~D~g~-------~~~~~~~i~~~d~~tg~~~~~~~~~~~---------------------------~~~~~~~~~~v~ 126 (343)
T 2qe8_A 81 WMLDNGN-------QSKSVPKLVAWDTLNNQLSRVIYLPPP---------------------------ITLSNSFVNDLA 126 (343)
T ss_dssp EEEECHH-------HHTSCCEEEEEETTTTEEEEEEECCTT---------------------------TSCTTCCCCEEE
T ss_pred EEEcCCC-------CcCCCCeEEEEECCCCeEEEEEECChh---------------------------hcccccccceEE
Confidence 9999985 246899999999999999999999876 455678899999
Q ss_pred EeccCCCCCeEEEEEcC---CCCeEEEEEcCCCeEEEEe--cCCcccCC
Q psy13477 244 VDVGKNCEDTFLYASDE---LAYGLLSYSWEENTSWRAS--HGFFFPDP 287 (295)
Q Consensus 244 VD~~~~c~~~~aYItD~---~~~gLIVydl~~~~swRv~--h~~f~pdp 287 (295)
||.. ++++||+|. +.++|+|||+++++.||+. |..+.|++
T Consensus 127 vd~~----~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~ 171 (343)
T 2qe8_A 127 VDLI----HNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPED 171 (343)
T ss_dssp EETT----TTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCS
T ss_pred EecC----CCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccc
Confidence 9963 579999999 7899999999999999998 45777765
No 3
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.33 E-value=3.9e-06 Score=79.98 Aligned_cols=150 Identities=13% Similarity=0.086 Sum_probs=99.3
Q ss_pred CCCCceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEE--
Q psy13477 82 PENNLPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKA-- 157 (295)
Q Consensus 82 p~n~~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~i-- 157 (295)
..+.+|.|+... ++|+|++- +.. .++..++.++. ... .+ -+|.... +-+..+.+.++.+
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~--l~~---g~V~~~~~~~~-~~~-~~-~~~~~s~---------~g~~~~~~sGl~~~~ 72 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSN--LYK---GRIEVYNPKTQ-SHF-NV-VIDGASS---------NGDGEQQMSGLSLLT 72 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEE--TTT---TEEEEECTTTC-CEE-EE-CCTTTCC---------SSCCSEEEEEEEESS
T ss_pred CcccCCcCccCcCCCCEEEEEe--ccC---CEEEEEcCCCC-eEE-EE-ecCCccc---------cCCCcceeeEEEEec
Confidence 457789999986 69999998 434 47888876421 100 12 2343210 1134577799999
Q ss_pred -cCCCcEEE-EeCCCCCCCCCccccCCceEEEEECC---CCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcc
Q psy13477 158 -DSCDRLWV-LDSGTVGIGNTTKQICPYAIHVFDLK---TDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPED 232 (295)
Q Consensus 158 -D~c~rLWV-LDtG~~~~~~~~~~~~~pKLvvfDL~---td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~ 232 (295)
|+.||||| +|.|..-........+...|+.|||+ |++++....|+.. ++. +| +..
T Consensus 73 ~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~--------------~~~----~~--~~~ 132 (334)
T 2p9w_A 73 HDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKV--------------QDE----FE--KKA 132 (334)
T ss_dssp SSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHH--------------HHH----HH--HHH
T ss_pred cCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccc--------------ccc----cc--ccc
Confidence 78999999 78765322222233467889999999 9999999998753 000 00 000
Q ss_pred cCCCCCceeEEEeccCCCCCeEEEEEcCCC-CeEEEEEcCCC
Q psy13477 233 ILPGTFIANIAVDVGKNCEDTFLYASDELA-YGLLSYSWEEN 273 (295)
Q Consensus 233 ~~~~S~l~di~VD~~~~c~~~~aYItD~~~-~gLIVydl~~~ 273 (295)
-..-...+|++||. ++-+|++|+.. +.|+.+|-...
T Consensus 133 g~~~~~~nDvavD~-----~GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 133 GKRPFGVVQSAQDR-----DGNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp SSCCEEEEEEEECT-----TSCEEEEEEESSCEEEEECTTSC
T ss_pred cccccCCceeEECC-----CCCEEEeCCCCCCeEEEEeCCCC
Confidence 00123589999994 57899999999 99999998755
No 4
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.42 E-value=0.0053 Score=54.69 Aligned_cols=139 Identities=12% Similarity=0.104 Sum_probs=89.9
Q ss_pred CceeeeEEe-CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcC-CCc
Q psy13477 85 NLPVGIEVW-RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADS-CDR 162 (295)
Q Consensus 85 ~~p~gi~v~-~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~-c~r 162 (295)
..|.|+++. +|++||+-.. -.++..+..++. ...+..+..... . ......+....+|.+|+ .++
T Consensus 91 ~~p~gia~d~~g~l~v~d~~-----~~~v~~~~~~g~---~~~~~~~~~~~~--~----g~~~~~~~~P~~ia~~~~~g~ 156 (329)
T 3fvz_A 91 YLPHGLSIDTDGNYWVTDVA-----LHQVFKLDPHSK---EGPLLILGRSMQ--P----GSDQNHFCQPTDVAVEPSTGA 156 (329)
T ss_dssp SSEEEEEECTTSCEEEEETT-----TTEEEEECTTCS---SCCSEEESBTTB--C----CCSTTCCSSEEEEEECTTTCC
T ss_pred CCceEEEECCCCCEEEEECC-----CCEEEEEeCCCC---eEEEEEecccCC--C----CCCccccCCCcEEEEeCCCCe
Confidence 359999997 8999998642 235666665421 002333322110 0 01123577889999998 899
Q ss_pred EEEEeC-CCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCC--CCc
Q psy13477 163 LWVLDS-GTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPG--TFI 239 (295)
Q Consensus 163 LWVLDt-G~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~--S~l 239 (295)
|||.|+ +. .+|.+|| .++++++.+.-....- ...++ ...
T Consensus 157 lyv~d~~~~------------~~I~~~~-~~g~~~~~~~~~g~~~-------------------------~~~~~~~~~p 198 (329)
T 3fvz_A 157 VFVSDGYCN------------SRIVQFS-PSGKFVTQWGEESSGS-------------------------SPRPGQFSVP 198 (329)
T ss_dssp EEEEECSSC------------CEEEEEC-TTSCEEEEECEECCSS-------------------------SCCTTEESCE
T ss_pred EEEEeCCCC------------CeEEEEc-CCCCEEEEeccCCCCC-------------------------CCCCcccCCC
Confidence 999997 32 3688999 5778877664433200 00011 246
Q ss_pred eeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 240 ANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 240 ~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
..|++|. +++.+|++|.+...|.+||.++|+.-+..
T Consensus 199 ~gia~d~----~~g~l~v~d~~~~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 199 HSLALVP----HLDQLCVADRENGRIQCFKTDTKEFVREI 234 (329)
T ss_dssp EEEEEET----TTTEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred cEEEEEC----CCCEEEEEECCCCEEEEEECCCCcEEEEE
Confidence 7899994 23799999999999999999977765543
No 5
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.38 E-value=0.0085 Score=53.69 Aligned_cols=122 Identities=11% Similarity=0.071 Sum_probs=85.3
Q ss_pred CceeeeEEeCCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCCcEE
Q psy13477 85 NLPVGIEVWRNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCDRLW 164 (295)
Q Consensus 85 ~~p~gi~v~~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~rLW 164 (295)
..|.++.+.++++|++... . -+|..++.... -.+.-+|. ......+.++..++||
T Consensus 44 ~~~~~i~~~~~~lyv~~~~--~---~~v~viD~~t~----~~~~~i~~----------------~~~p~~i~~~~~g~ly 98 (328)
T 3dsm_A 44 DVAQSMVIRDGIGWIVVNN--S---HVIFAIDINTF----KEVGRITG----------------FTSPRYIHFLSDEKAY 98 (328)
T ss_dssp SCEEEEEEETTEEEEEEGG--G---TEEEEEETTTC----CEEEEEEC----------------CSSEEEEEEEETTEEE
T ss_pred ccceEEEEECCEEEEEEcC--C---CEEEEEECccc----EEEEEcCC----------------CCCCcEEEEeCCCeEE
Confidence 4578898999999999853 2 37777775321 12233321 1234566676678999
Q ss_pred EEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEE
Q psy13477 165 VLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAV 244 (295)
Q Consensus 165 VLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~V 244 (295)
|.|.+ .-+|.+||++|+++++++..+.. .........|++
T Consensus 99 v~~~~------------~~~v~~iD~~t~~~~~~i~~g~~----------------------------~~~~~~p~~i~~ 138 (328)
T 3dsm_A 99 VTQIW------------DYRIFIINPKTYEITGYIECPDM----------------------------DMESGSTEQMVQ 138 (328)
T ss_dssp EEEBS------------CSEEEEEETTTTEEEEEEECTTC----------------------------CTTTCBCCCEEE
T ss_pred EEECC------------CCeEEEEECCCCeEEEEEEcCCc----------------------------cccCCCcceEEE
Confidence 99963 13699999999999999988763 011123456777
Q ss_pred eccCCCCCeEEEEEcCC-CCeEEEEEcCCCeEEE
Q psy13477 245 DVGKNCEDTFLYASDEL-AYGLLSYSWEENTSWR 277 (295)
Q Consensus 245 D~~~~c~~~~aYItD~~-~~gLIVydl~~~~swR 277 (295)
+ ++.+|++|.+ ...|.|+|.++++.-+
T Consensus 139 ~------~~~lyv~~~~~~~~v~viD~~t~~~~~ 166 (328)
T 3dsm_A 139 Y------GKYVYVNCWSYQNRILKIDTETDKVVD 166 (328)
T ss_dssp E------TTEEEEEECTTCCEEEEEETTTTEEEE
T ss_pred E------CCEEEEEcCCCCCEEEEEECCCCeEEE
Confidence 5 5789999985 7899999999998654
No 6
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.37 E-value=0.0053 Score=52.44 Aligned_cols=127 Identities=11% Similarity=0.170 Sum_probs=83.5
Q ss_pred CceeeeEEe-CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEE-cCCCc
Q psy13477 85 NLPVGIEVW-RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKA-DSCDR 162 (295)
Q Consensus 85 ~~p~gi~v~-~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~i-D~c~r 162 (295)
.-|.++++. +|++||+--. -.+|..+..++ ..+..++.-. .....+..+..+.+ |..++
T Consensus 30 ~~p~~v~~~~~g~l~v~~~~-----~~~i~~~d~~g-----~~~~~~~~~~---------~~~~~~~~p~~i~~~~~~g~ 90 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVADTN-----NHRIQIFDKEG-----RFKFQFGECG---------KRDSQLLYPNRVAVVRNSGD 90 (286)
T ss_dssp SCEEEEEECTTCCEEEEEGG-----GTEEEEECTTS-----CEEEEECCBS---------SSTTCBSSEEEEEEETTTTE
T ss_pred CCCceEEECCCCCEEEEECC-----CCEEEEECCCC-----cEEEEecccC---------CCcccccCceEEEEEcCCCe
Confidence 459999997 8999998522 13566665432 1344443211 01124556788888 68999
Q ss_pred EEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeE
Q psy13477 163 LWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANI 242 (295)
Q Consensus 163 LWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di 242 (295)
|||.|.+. ...|.+|| .++++++++..+.. .....|
T Consensus 91 l~v~~~~~-----------~~~i~~~d-~~g~~~~~~~~~~~--------------------------------~~~~~i 126 (286)
T 1q7f_A 91 IIVTERSP-----------THQIQIYN-QYGQFVRKFGATIL--------------------------------QHPRGV 126 (286)
T ss_dssp EEEEECGG-----------GCEEEEEC-TTSCEEEEECTTTC--------------------------------SCEEEE
T ss_pred EEEEcCCC-----------CCEEEEEC-CCCcEEEEecCccC--------------------------------CCceEE
Confidence 99999652 13689999 67788777643321 246788
Q ss_pred EEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 243 AVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 243 ~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
++|. ++.+|++|.....|.+||......+.+.
T Consensus 127 ~~~~-----~g~l~v~~~~~~~i~~~~~~g~~~~~~~ 158 (286)
T 1q7f_A 127 TVDN-----KGRIIVVECKVMRVIIFDQNGNVLHKFG 158 (286)
T ss_dssp EECT-----TSCEEEEETTTTEEEEECTTSCEEEEEE
T ss_pred EEeC-----CCCEEEEECCCCEEEEEcCCCCEEEEeC
Confidence 8884 3569999998889999997655555443
No 7
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.23 E-value=0.0035 Score=52.66 Aligned_cols=119 Identities=17% Similarity=0.155 Sum_probs=78.0
Q ss_pred CceeeeEEe-CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCCcE
Q psy13477 85 NLPVGIEVW-RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCDRL 163 (295)
Q Consensus 85 ~~p~gi~v~-~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~rL 163 (295)
..|.++++. +|++||+-- . ..|..+..++. .+..++. .++..+.++.+|++|+|
T Consensus 67 ~~p~~i~~~~~g~l~v~~~---~---~~i~~~d~~~~-----~~~~~~~--------------~~~~~p~~i~~~~~g~l 121 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF---N---NRVVTLAAGSN-----NQTVLPF--------------DGLNYPEGLAVDTQGAV 121 (270)
T ss_dssp CSCCCEEECTTCCEEEEET---T---TEEEEECTTCS-----CCEECCC--------------CSCSSEEEEEECTTCCE
T ss_pred CCcceeEECCCCCEEEEcC---C---CEEEEEeCCCc-----eEeeeec--------------CCcCCCcceEECCCCCE
Confidence 458899997 889999863 2 36766765421 2333321 12345678999999999
Q ss_pred EEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEE
Q psy13477 164 WVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIA 243 (295)
Q Consensus 164 WVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~ 243 (295)
||.|.+. -+|.+||..+.+... .... .......|+
T Consensus 122 ~v~~~~~------------~~i~~~~~~~~~~~~---~~~~------------------------------~~~~p~~i~ 156 (270)
T 1rwi_B 122 YVADRGN------------NRVVKLAAGSKTQTV---LPFT------------------------------GLNDPDGVA 156 (270)
T ss_dssp EEEEGGG------------TEEEEECTTCCSCEE---CCCC------------------------------SCCSCCCEE
T ss_pred EEEECCC------------CEEEEEECCCceeEe---eccc------------------------------cCCCceeEE
Confidence 9999762 257778766654322 1111 112456788
Q ss_pred EeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEE
Q psy13477 244 VDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRA 278 (295)
Q Consensus 244 VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv 278 (295)
+|. ++.+|++|.....|.+||..++.....
T Consensus 157 ~~~-----~g~l~v~~~~~~~i~~~~~~~~~~~~~ 186 (270)
T 1rwi_B 157 VDN-----SGNVYVTDTDNNRVVKLEAESNNQVVL 186 (270)
T ss_dssp ECT-----TCCEEEEEGGGTEEEEECTTTCCEEEC
T ss_pred EeC-----CCCEEEEECCCCEEEEEecCCCceEee
Confidence 884 345999999888999999888776543
No 8
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.19 E-value=0.018 Score=50.92 Aligned_cols=117 Identities=12% Similarity=0.022 Sum_probs=80.1
Q ss_pred CceeeeEEe-CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCCcE
Q psy13477 85 NLPVGIEVW-RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCDRL 163 (295)
Q Consensus 85 ~~p~gi~v~-~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~rL 163 (295)
..|.|+++. +|++|++-.. . .+|..+..++ .+.. .+.. + -.+.++.+|++|+|
T Consensus 32 ~~pegia~~~~g~lyv~d~~--~---~~I~~~d~~g------~~~~----~~~~-~----------~~p~gia~~~dG~l 85 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHE--V---GEIVSITPDG------NQQI----HATV-E----------GKVSGLAFTSNGDL 85 (306)
T ss_dssp CCEEEEEECTTSCEEEEETT--T---TEEEEECTTC------CEEE----EEEC-S----------SEEEEEEECTTSCE
T ss_pred CCcceEEECCCCCEEEEeCC--C---CeEEEECCCC------ceEE----EEeC-C----------CCceeEEEcCCCcE
Confidence 569999996 8899999622 2 3576676432 1211 1111 0 14778899999999
Q ss_pred EEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEE
Q psy13477 164 WVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIA 243 (295)
Q Consensus 164 WVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~ 243 (295)
||.|.+.- ..+|+.||..++++.+...++.. .+.+.++
T Consensus 86 ~vad~~~~----------~~~v~~~d~~~g~~~~~~~~~~~--------------------------------~~~~g~~ 123 (306)
T 2p4o_A 86 VATGWNAD----------SIPVVSLVKSDGTVETLLTLPDA--------------------------------IFLNGIT 123 (306)
T ss_dssp EEEEECTT----------SCEEEEEECTTSCEEEEEECTTC--------------------------------SCEEEEE
T ss_pred EEEeccCC----------cceEEEEcCCCCeEEEEEeCCCc--------------------------------cccCccc
Confidence 99997641 13689999999998766665432 2445555
Q ss_pred EeccCCCCCeEEEEEcCCCCeEEEEEcCCCe
Q psy13477 244 VDVGKNCEDTFLYASDELAYGLLSYSWEENT 274 (295)
Q Consensus 244 VD~~~~c~~~~aYItD~~~~gLIVydl~~~~ 274 (295)
++ .++.+|++|...+.|.++|..+++
T Consensus 124 ~~-----~~~~~~v~d~~~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 124 PL-----SDTQYLTADSYRGAIWLIDVVQPS 149 (306)
T ss_dssp ES-----SSSEEEEEETTTTEEEEEETTTTE
T ss_pred cc-----CCCcEEEEECCCCeEEEEeCCCCc
Confidence 54 256799999988899999998763
No 9
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.13 E-value=0.015 Score=49.57 Aligned_cols=123 Identities=14% Similarity=0.184 Sum_probs=82.5
Q ss_pred CceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCCc
Q psy13477 85 NLPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCDR 162 (295)
Q Consensus 85 ~~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~r 162 (295)
..|.++++. +|++||+-... ...+..+..++ ..++.++. ..+..+.++.+|++|+
T Consensus 77 ~~p~~i~~~~~~g~l~v~~~~~----~~~i~~~d~~g-----~~~~~~~~--------------~~~~~~~~i~~~~~g~ 133 (286)
T 1q7f_A 77 LYPNRVAVVRNSGDIIVTERSP----THQIQIYNQYG-----QFVRKFGA--------------TILQHPRGVTVDNKGR 133 (286)
T ss_dssp SSEEEEEEETTTTEEEEEECGG----GCEEEEECTTS-----CEEEEECT--------------TTCSCEEEEEECTTSC
T ss_pred cCceEEEEEcCCCeEEEEcCCC----CCEEEEECCCC-----cEEEEecC--------------ccCCCceEEEEeCCCC
Confidence 458999993 89999996321 13566665332 12333321 1234567899999999
Q ss_pred EEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeE
Q psy13477 163 LWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANI 242 (295)
Q Consensus 163 LWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di 242 (295)
|||.|.+. -+|.+||. ++++++++..+.. ......|
T Consensus 134 l~v~~~~~------------~~i~~~~~-~g~~~~~~~~~~~-------------------------------~~~p~~i 169 (286)
T 1q7f_A 134 IIVVECKV------------MRVIIFDQ-NGNVLHKFGCSKH-------------------------------LEFPNGV 169 (286)
T ss_dssp EEEEETTT------------TEEEEECT-TSCEEEEEECTTT-------------------------------CSSEEEE
T ss_pred EEEEECCC------------CEEEEEcC-CCCEEEEeCCCCc-------------------------------cCCcEEE
Confidence 99999753 26889996 4667776654332 1246788
Q ss_pred EEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 243 AVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 243 ~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
++|. ++.+|++|.....|.+||......+.+.
T Consensus 170 ~~~~-----~g~l~v~~~~~~~i~~~~~~g~~~~~~~ 201 (286)
T 1q7f_A 170 VVND-----KQEIFISDNRAHCVKVFNYEGQYLRQIG 201 (286)
T ss_dssp EECS-----SSEEEEEEGGGTEEEEEETTCCEEEEES
T ss_pred EECC-----CCCEEEEECCCCEEEEEcCCCCEEEEEc
Confidence 9984 4679999999999999998665555553
No 10
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.12 E-value=0.0025 Score=57.19 Aligned_cols=82 Identities=11% Similarity=0.211 Sum_probs=61.8
Q ss_pred eEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcc
Q psy13477 153 YRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPED 232 (295)
Q Consensus 153 ~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~ 232 (295)
.++.+|++|+|||.+.|..+.. +-.....+|.+||++|+++++++.++..
T Consensus 175 ~~i~~~~dG~l~v~~~~~~~~~--~~~~~~~~v~~id~~t~~v~~~~~~~~g---------------------------- 224 (328)
T 3dsm_A 175 TSLVMDKYNKMWTITDGGYEGS--PYGYEAPSLYRIDAETFTVEKQFKFKLG---------------------------- 224 (328)
T ss_dssp CCCEECTTSEEEEEBCCBCTTC--SSCBCCCEEEEEETTTTEEEEEEECCTT----------------------------
T ss_pred cceEEcCCCCEEEEECCCccCC--ccccCCceEEEEECCCCeEEEEEecCCC----------------------------
Confidence 4677899999999999874321 0011246899999999999999988753
Q ss_pred cCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeE
Q psy13477 233 ILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTS 275 (295)
Q Consensus 233 ~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~s 275 (295)
..-+.|+++. ++.++|++|. .+.++|.++++.
T Consensus 225 ----~~p~~la~~~----d~~~lyv~~~---~v~~~d~~t~~~ 256 (328)
T 3dsm_A 225 ----DWPSEVQLNG----TRDTLYWINN---DIWRMPVEADRV 256 (328)
T ss_dssp ----CCCEEEEECT----TSCEEEEESS---SEEEEETTCSSC
T ss_pred ----CCceeEEEec----CCCEEEEEcc---EEEEEECCCCce
Confidence 2356788884 3678999987 789999988874
No 11
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.09 E-value=0.0035 Score=55.84 Aligned_cols=89 Identities=12% Similarity=0.070 Sum_probs=63.1
Q ss_pred ccEEEeEEEEcCCCcEEEEeCCCCCCCC---C---------ccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeee
Q psy13477 148 TLTTTYRIKADSCDRLWVLDSGTVGIGN---T---------TKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANI 215 (295)
Q Consensus 148 ~lvsV~~i~iD~c~rLWVLDtG~~~~~~---~---------~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~i 215 (295)
.|-.+.++.+|++|+|||.|.+.-.... . ........|.+||..|+++++.+. ..
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~--~~----------- 88 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG--KN----------- 88 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC--TT-----------
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC--CC-----------
Confidence 4677899999999999999997721100 0 001123479999999999876442 22
Q ss_pred ecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCC
Q psy13477 216 AVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEEN 273 (295)
Q Consensus 216 a~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~ 273 (295)
.-.....|++|. ++.+|++|.....|.+||....
T Consensus 89 -------------------~~~~p~gia~d~-----~g~l~v~d~~~~~v~~~~~~g~ 122 (329)
T 3fvz_A 89 -------------------LFYLPHGLSIDT-----DGNYWVTDVALHQVFKLDPHSK 122 (329)
T ss_dssp -------------------TCSSEEEEEECT-----TSCEEEEETTTTEEEEECTTCS
T ss_pred -------------------ccCCceEEEECC-----CCCEEEEECCCCEEEEEeCCCC
Confidence 112467889984 3459999999999999998765
No 12
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.05 E-value=0.017 Score=48.64 Aligned_cols=119 Identities=12% Similarity=0.173 Sum_probs=79.9
Q ss_pred CceeeeEEe-CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCCcE
Q psy13477 85 NLPVGIEVW-RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCDRL 163 (295)
Q Consensus 85 ~~p~gi~v~-~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~rL 163 (295)
.-|.++.+. +|++|++-.. ...|..+..++ .+..|+. + ..+..+.++.+|++|+|
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~-----~~~v~~~~~~~------~~~~~~~------~-------~~~~~~~~i~~~~~g~l 75 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHK-----ANKISSLDQSG------RIKEFEV------P-------TPDAKVMCLIVSSLGDI 75 (300)
T ss_dssp CCEEEEEECTTSCEEEEETT-----TTEEEEECTTS------CEEEEEC------S-------STTCCEEEEEECTTSCE
T ss_pred CCcceeeECCCCCEEEEcCC-----CCeEEEECCCC------ceEEEEC------C-------CCCCcceeEEECCCCCE
Confidence 458899997 8999998632 23676666431 2332321 0 12356788999999999
Q ss_pred EEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEE
Q psy13477 164 WVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIA 243 (295)
Q Consensus 164 WVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~ 243 (295)
||.|.+. -.|..||.+ ++. +++.++.. ......|+
T Consensus 76 ~v~~~~~------------~~v~~~d~~-g~~-~~~~~~~~-------------------------------~~~~~~i~ 110 (300)
T 2qc5_A 76 WFTENGA------------NKIGKLSKK-GGF-TEYPLPQP-------------------------------DSGPYGIT 110 (300)
T ss_dssp EEEETTT------------TEEEEECTT-SCE-EEEECSST-------------------------------TCCEEEEE
T ss_pred EEEecCC------------CeEEEECCC-CCe-EEecCCCC-------------------------------CCCCccce
Confidence 9998643 258899988 665 56766643 13466778
Q ss_pred EeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEE
Q psy13477 244 VDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRA 278 (295)
Q Consensus 244 VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv 278 (295)
+|. ++.+|+++....+|.+||.+ ++..++
T Consensus 111 ~~~-----~g~l~v~~~~~~~i~~~~~~-g~~~~~ 139 (300)
T 2qc5_A 111 EGL-----NGDIWFTQLNGDRIGKLTAD-GTIYEY 139 (300)
T ss_dssp ECS-----TTCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred ECC-----CCCEEEEccCCCeEEEECCC-CCEEEc
Confidence 873 45688888877888888887 655444
No 13
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.04 E-value=0.018 Score=48.47 Aligned_cols=120 Identities=14% Similarity=0.148 Sum_probs=78.7
Q ss_pred CCceeeeEEe-CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCCc
Q psy13477 84 NNLPVGIEVW-RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCDR 162 (295)
Q Consensus 84 n~~p~gi~v~-~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~r 162 (295)
...|.++.+. +|++|++-.. ...|..+..++ .+..++. + .....+.++.+|+.|+
T Consensus 98 ~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~~g------~~~~~~~------~-------~~~~~~~~i~~~~~g~ 153 (299)
T 2z2n_A 98 DSAPYGITEGPNGDIWFTEMN-----GNRIGRITDDG------KIREYEL------P-------NKGSYPSFITLGSDNA 153 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETT-----TTEEEEECTTC------CEEEEEC------S-------STTCCEEEEEECTTSC
T ss_pred CCCceeeEECCCCCEEEEecC-----CceEEEECCCC------CEEEecC------C-------CCCCCCceEEEcCCCC
Confidence 3458899887 7999998632 23566665421 2333321 0 0123567889999999
Q ss_pred EEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeE
Q psy13477 163 LWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANI 242 (295)
Q Consensus 163 LWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di 242 (295)
||+.+.+. .+|..||+ ++++. .+.++.. ......|
T Consensus 154 l~v~~~~~------------~~i~~~~~-~g~~~-~~~~~~~-------------------------------~~~~~~i 188 (299)
T 2z2n_A 154 LWFTENQN------------NAIGRITE-SGDIT-EFKIPTP-------------------------------ASGPVGI 188 (299)
T ss_dssp EEEEETTT------------TEEEEECT-TCCEE-EEECSST-------------------------------TCCEEEE
T ss_pred EEEEeCCC------------CEEEEEcC-CCcEE-EeeCCCC-------------------------------CCcceeE
Confidence 99998642 25889999 77654 4555432 1245678
Q ss_pred EEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEE
Q psy13477 243 AVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRA 278 (295)
Q Consensus 243 ~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv 278 (295)
++|. ++.+|+++....+|.+||. +++.-.+
T Consensus 189 ~~~~-----~g~l~v~~~~~~~i~~~~~-~g~~~~~ 218 (299)
T 2z2n_A 189 TKGN-----DDALWFVEIIGNKIGRITT-SGEITEF 218 (299)
T ss_dssp EECT-----TSSEEEEETTTTEEEEECT-TCCEEEE
T ss_pred EECC-----CCCEEEEccCCceEEEECC-CCcEEEE
Confidence 8884 3458999988889999998 7764443
No 14
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.03 E-value=0.026 Score=47.41 Aligned_cols=119 Identities=13% Similarity=0.140 Sum_probs=77.2
Q ss_pred CceeeeEEe-CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCCcE
Q psy13477 85 NLPVGIEVW-RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCDRL 163 (295)
Q Consensus 85 ~~p~gi~v~-~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~rL 163 (295)
..|.++.+. +|++|++-.. . ..|..+..++ .+..++. + ..+..+.++.+|+.|+|
T Consensus 141 ~~~~~i~~~~~g~l~v~~~~--~---~~i~~~~~~g------~~~~~~~------~-------~~~~~~~~i~~~~~g~l 196 (299)
T 2z2n_A 141 SYPSFITLGSDNALWFTENQ--N---NAIGRITESG------DITEFKI------P-------TPASGPVGITKGNDDAL 196 (299)
T ss_dssp CCEEEEEECTTSCEEEEETT--T---TEEEEECTTC------CEEEEEC------S-------STTCCEEEEEECTTSSE
T ss_pred CCCceEEEcCCCCEEEEeCC--C---CEEEEEcCCC------cEEEeeC------C-------CCCCcceeEEECCCCCE
Confidence 347777776 7788887521 1 2455555421 2332211 0 12345678999999999
Q ss_pred EEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEE
Q psy13477 164 WVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIA 243 (295)
Q Consensus 164 WVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~ 243 (295)
||.+.+. -+|..||+ ++++ +.+.++.. ......|+
T Consensus 197 ~v~~~~~------------~~i~~~~~-~g~~-~~~~~~~~-------------------------------~~~~~~i~ 231 (299)
T 2z2n_A 197 WFVEIIG------------NKIGRITT-SGEI-TEFKIPTP-------------------------------NARPHAIT 231 (299)
T ss_dssp EEEETTT------------TEEEEECT-TCCE-EEEECSST-------------------------------TCCEEEEE
T ss_pred EEEccCC------------ceEEEECC-CCcE-EEEECCCC-------------------------------CCCceeEE
Confidence 9998652 25899999 7774 45655532 13467888
Q ss_pred EeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEE
Q psy13477 244 VDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRA 278 (295)
Q Consensus 244 VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv 278 (295)
+|. ++.+|+++....+|.+||. +++...+
T Consensus 232 ~~~-----~g~l~v~~~~~~~i~~~d~-~g~~~~~ 260 (299)
T 2z2n_A 232 AGA-----GIDLWFTEWGANKIGRLTS-NNIIEEY 260 (299)
T ss_dssp ECS-----TTCEEEEETTTTEEEEEET-TTEEEEE
T ss_pred ECC-----CCCEEEeccCCceEEEECC-CCceEEE
Confidence 884 4569999998899999998 5654444
No 15
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.85 E-value=0.064 Score=45.90 Aligned_cols=122 Identities=16% Similarity=0.141 Sum_probs=80.2
Q ss_pred CceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCC-C
Q psy13477 85 NLPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSC-D 161 (295)
Q Consensus 85 ~~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c-~ 161 (295)
.-|.|+++. ++++|++-.. . -..++..+..++. ..+.... ..+....++.+|.. +
T Consensus 122 ~~P~~i~vd~~~g~lyv~~~~--~-~~~~I~~~~~dg~-----~~~~~~~--------------~~~~~P~gia~d~~~~ 179 (267)
T 1npe_A 122 VNPRGIVTDPVRGNLYWTDWN--R-DNPKIETSHMDGT-----NRRILAQ--------------DNLGLPNGLTFDAFSS 179 (267)
T ss_dssp SSEEEEEEETTTTEEEEEECC--S-SSCEEEEEETTSC-----CCEEEEC--------------TTCSCEEEEEEETTTT
T ss_pred CCccEEEEeeCCCEEEEEECC--C-CCcEEEEEecCCC-----CcEEEEE--------------CCCCCCcEEEEcCCCC
Confidence 468999997 6899998632 1 1236666665532 1111100 12345778899984 7
Q ss_pred cEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCcee
Q psy13477 162 RLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIAN 241 (295)
Q Consensus 162 rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~d 241 (295)
+|||.|.+. -+|.+||+.+.++...+. .. ..-..
T Consensus 180 ~lyv~d~~~------------~~I~~~~~~g~~~~~~~~--~~--------------------------------~~P~g 213 (267)
T 1npe_A 180 QLCWVDAGT------------HRAECLNPAQPGRRKVLE--GL--------------------------------QYPFA 213 (267)
T ss_dssp EEEEEETTT------------TEEEEEETTEEEEEEEEE--CC--------------------------------CSEEE
T ss_pred EEEEEECCC------------CEEEEEecCCCceEEEec--CC--------------------------------CCceE
Confidence 899999875 268899997654332221 11 12346
Q ss_pred EEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEec
Q psy13477 242 IAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRASH 280 (295)
Q Consensus 242 i~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~h 280 (295)
|++| ++++|++|.+...|.++|.++++.-+...
T Consensus 214 i~~d------~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 214 VTSY------GKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp EEEE------TTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred EEEe------CCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 7777 47899999999999999999998665543
No 16
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.74 E-value=0.008 Score=51.46 Aligned_cols=74 Identities=15% Similarity=0.252 Sum_probs=56.2
Q ss_pred EEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCC
Q psy13477 151 TTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRP 230 (295)
Q Consensus 151 sV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~ 230 (295)
.+.++.+|++|+|||.+.+. -.|..||++|+++++.+.++..
T Consensus 227 ~p~~i~~d~~G~l~v~~~~~------------~~i~~~d~~~g~~~~~~~~~~~-------------------------- 268 (314)
T 1pjx_A 227 GADGMDFDEDNNLLVANWGS------------SHIEVFGPDGGQPKMRIRCPFE-------------------------- 268 (314)
T ss_dssp EEEEEEEBTTCCEEEEEETT------------TEEEEECTTCBSCSEEEECSSS--------------------------
T ss_pred CCCceEECCCCCEEEEEcCC------------CEEEEEcCCCCcEeEEEeCCCC--------------------------
Confidence 45667788889999987652 2588899988888777766543
Q ss_pred cccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCC
Q psy13477 231 EDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEEN 273 (295)
Q Consensus 231 ~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~ 273 (295)
....++++. ++.++|+++....+|.+|+++..
T Consensus 269 -------~~~~i~~~~----dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 269 -------KPSNLHFKP----QTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp -------CEEEEEECT----TSSEEEEEETTTTEEEEEECSSC
T ss_pred -------CceeEEECC----CCCEEEEEeCCCCeEEEEeCCCC
Confidence 466778863 35679999999899999998753
No 17
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.64 E-value=0.077 Score=48.67 Aligned_cols=121 Identities=15% Similarity=0.109 Sum_probs=81.5
Q ss_pred CceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEc-CCC
Q psy13477 85 NLPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKAD-SCD 161 (295)
Q Consensus 85 ~~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD-~c~ 161 (295)
.-|.|+++. +|+||+|- |. -+..+..+..++. ..+..- ..++....++.+| ..+
T Consensus 159 ~~P~~iavdp~~g~ly~td--~~--~~~~I~r~~~dG~-----~~~~~~--------------~~~~~~PnGla~d~~~~ 215 (349)
T 3v64_C 159 EKPRAIALHPMEGTIYWTD--WG--NTPRIEASSMDGS-----GRRIIA--------------DTHLFWPNGLTIDYAGR 215 (349)
T ss_dssp SCEEEEEEETTTTEEEEEE--CS--SSCEEEEEETTSC-----SCEESC--------------CSSCSCEEEEEEETTTT
T ss_pred CCcceEEEecCcCeEEEec--cC--CCCEEEEEeCCCC-----CcEEEE--------------ECCCCCcceEEEeCCCC
Confidence 458999997 78999996 32 2457877776542 111110 0235667899999 589
Q ss_pred cEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCcee
Q psy13477 162 RLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIAN 241 (295)
Q Consensus 162 rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~d 241 (295)
+||+.|++. .+|..+|+...... ++ +... ...-..
T Consensus 216 ~lY~aD~~~------------~~I~~~~~dG~~~~-~~-~~~~-------------------------------~~~P~g 250 (349)
T 3v64_C 216 RMYWVDAKH------------HVIERANLDGSHRK-AV-ISQG-------------------------------LPHPFA 250 (349)
T ss_dssp EEEEEETTT------------TEEEEEETTSCSCE-EE-ECSS-------------------------------CSSEEE
T ss_pred EEEEEECCC------------CEEEEEeCCCCceE-EE-EeCC-------------------------------CCCceE
Confidence 999999865 26888888653321 11 1111 124567
Q ss_pred EEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 242 IAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 242 i~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
|+|+ ++++|++|.+...|..+|..+|+..++.
T Consensus 251 iav~------~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 251 ITVF------EDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp EEEE------TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEEE------CCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 8886 4689999999999999997777665544
No 18
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.62 E-value=0.0068 Score=53.66 Aligned_cols=85 Identities=15% Similarity=0.189 Sum_probs=57.6
Q ss_pred cEEEeEEEEcC-CCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhcccc
Q psy13477 149 LTTTYRIKADS-CDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQ 227 (295)
Q Consensus 149 lvsV~~i~iD~-c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~ 227 (295)
+..+.++.+|+ .|+|||.|.+. .|+.||+.++++ +.+.-...
T Consensus 79 ~~~p~gi~~~~~~g~l~v~d~~~-------------~i~~~d~~~g~~-~~~~~~~~----------------------- 121 (322)
T 2fp8_A 79 CGRTYDISYNLQNNQLYIVDCYY-------------HLSVVGSEGGHA-TQLATSVD----------------------- 121 (322)
T ss_dssp HCCEEEEEEETTTTEEEEEETTT-------------EEEEECTTCEEC-EEEESEET-----------------------
T ss_pred CCCCceEEEcCCCCcEEEEECCC-------------CEEEEeCCCCEE-EEecccCC-----------------------
Confidence 34678999996 89999999762 288899887653 23311111
Q ss_pred CCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCC-----------------CeEEEEEcCCCeEEEEe
Q psy13477 228 FRPEDILPGTFIANIAVDVGKNCEDTFLYASDELA-----------------YGLLSYSWEENTSWRAS 279 (295)
Q Consensus 228 ~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~-----------------~gLIVydl~~~~swRv~ 279 (295)
-.+..+.++|++|.. ++.+|++|... .+|++||.++++.-.+.
T Consensus 122 -----~~~~~~p~~i~~d~~----~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~ 181 (322)
T 2fp8_A 122 -----GVPFKWLYAVTVDQR----TGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL 181 (322)
T ss_dssp -----TEECSCEEEEEECTT----TCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEE
T ss_pred -----CCcccccceEEEecC----CCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEec
Confidence 012246789999941 46799999762 56999999888765443
No 19
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.59 E-value=0.024 Score=49.70 Aligned_cols=131 Identities=11% Similarity=0.141 Sum_probs=80.6
Q ss_pred CCceeeeEEe-CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCCc
Q psy13477 84 NNLPVGIEVW-RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCDR 162 (295)
Q Consensus 84 n~~p~gi~v~-~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~r 162 (295)
...|.|+.+. +|+++++-.. -..|..+..++ .++.+..-. ....+.++..+.+|++|+
T Consensus 85 ~~~~~gl~~d~dG~l~v~~~~-----~~~v~~~~~~g------~~~~~~~~~----------~~~~~~~~~~i~~d~dG~ 143 (305)
T 3dr2_A 85 TAFTNGNAVDAQQRLVHCEHG-----RRAITRSDADG------QAHLLVGRY----------AGKRLNSPNDLIVARDGA 143 (305)
T ss_dssp CSCEEEEEECTTSCEEEEETT-----TTEEEEECTTS------CEEEEECEE----------TTEECSCCCCEEECTTSC
T ss_pred CCccceeeECCCCCEEEEECC-----CCEEEEECCCC------CEEEEEecc----------CCCccCCCCCEEECCCCC
Confidence 3458899997 8999998532 12566665432 233332100 001244567789999999
Q ss_pred EEEEeC--CCCCCC-C--CccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCC
Q psy13477 163 LWVLDS--GTVGIG-N--TTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGT 237 (295)
Q Consensus 163 LWVLDt--G~~~~~-~--~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S 237 (295)
||+-|. |..... + .........|..||++++++.... . . .
T Consensus 144 l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~----~---------------------------~----~ 188 (305)
T 3dr2_A 144 IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA----D---------------------------L----D 188 (305)
T ss_dssp EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE----E---------------------------E----S
T ss_pred EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe----c---------------------------C----C
Confidence 999997 443210 0 011122357999999888765432 2 1 1
Q ss_pred CceeEEEeccCCCCCeEEEEEcCCC-----CeEEEEEcCCCe
Q psy13477 238 FIANIAVDVGKNCEDTFLYASDELA-----YGLLSYSWEENT 274 (295)
Q Consensus 238 ~l~di~VD~~~~c~~~~aYItD~~~-----~gLIVydl~~~~ 274 (295)
..+.++++. ++..+|++|... ..|.+||+..+.
T Consensus 189 ~p~gl~~sp----dg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 189 HPNGLAFSP----DEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp SEEEEEECT----TSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred CCcceEEcC----CCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 345677764 356899999974 789999998764
No 20
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.59 E-value=0.026 Score=51.50 Aligned_cols=78 Identities=13% Similarity=0.032 Sum_probs=60.7
Q ss_pred EeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCc
Q psy13477 152 TYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPE 231 (295)
Q Consensus 152 V~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~ 231 (295)
.+++.++++++||+-.... ..-+|.++|++|+++++++.+++.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~----------~~s~v~~iD~~tg~v~~~i~l~~~--------------------------- 65 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLY----------GRSSVRQVALQTGKVENIHKMDDS--------------------------- 65 (266)
T ss_dssp EEEEEECSTTEEEEEECST----------TTCEEEEEETTTCCEEEEEECCTT---------------------------
T ss_pred cccEEEeCCCeEEEECCCC----------CCCEEEEEECCCCCEEEEEecCCC---------------------------
Confidence 4778888889999964321 234799999999999999998775
Q ss_pred ccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEE
Q psy13477 232 DILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWR 277 (295)
Q Consensus 232 ~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swR 277 (295)
.|-..++++ +..+|+++.....+.|||.++.+--+
T Consensus 66 -----~fgeGi~~~------g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 66 -----YFGEGLTLL------NEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp -----CCEEEEEEE------TTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred -----cceEEEEEe------CCEEEEEEecCCEEEEEECCCCcEEE
Confidence 133457776 35899999999999999999886544
No 21
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.50 E-value=0.015 Score=50.18 Aligned_cols=123 Identities=10% Similarity=-0.092 Sum_probs=77.6
Q ss_pred CCceeeeEEe-CCc-EEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCC
Q psy13477 84 NNLPVGIEVW-RNK-LFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCD 161 (295)
Q Consensus 84 n~~p~gi~v~-~gR-iFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~ 161 (295)
...|.|+.+. +|+ +|++--. . .+|..+..++ . ++.|.. . ...+..+.+|++|
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~--~---~~i~~~~~~~-----~-~~~~~~---~------------~~~~~~l~~~~dg 80 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVR--Q---NRTWAWSDDG-----Q-LSPEMH---P------------SHHQNGHCLNKQG 80 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGG--G---TEEEEEETTS-----C-EEEEES---S------------CSSEEEEEECTTC
T ss_pred CccccCCeEeCCCCEEEEEeCC--C---CEEEEEECCC-----C-eEEEEC---C------------CCCcceeeECCCC
Confidence 4467899887 666 6655422 2 2677776542 1 333321 0 0136788999999
Q ss_pred cEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCcee
Q psy13477 162 RLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIAN 241 (295)
Q Consensus 162 rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~d 241 (295)
+|||.+.|. ..|..||++++++......... .+....++
T Consensus 81 ~l~v~~~~~------------~~i~~~d~~~g~~~~~~~~~~~-----------------------------~~~~~~~~ 119 (296)
T 3e5z_A 81 HLIACSHGL------------RRLERQREPGGEWESIADSFEG-----------------------------KKLNSPND 119 (296)
T ss_dssp CEEEEETTT------------TEEEEECSTTCCEEEEECEETT-----------------------------EECCCCCC
T ss_pred cEEEEecCC------------CeEEEEcCCCCcEEEEeeccCC-----------------------------CCCCCCCC
Confidence 999998764 2589999999986433211111 12245788
Q ss_pred EEEeccCCCCCeEEEEEcCC-----------------CCeEEEEEcCCCeEEEEe
Q psy13477 242 IAVDVGKNCEDTFLYASDEL-----------------AYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 242 i~VD~~~~c~~~~aYItD~~-----------------~~gLIVydl~~~~swRv~ 279 (295)
+++|. ++.+|+||.. ..+|..||.. ++..++.
T Consensus 120 i~~d~-----~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (296)
T 3e5z_A 120 VCLAP-----DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPI 168 (296)
T ss_dssp EEECT-----TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEE
T ss_pred EEECC-----CCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEee
Confidence 99984 4669998762 3578888877 6665554
No 22
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.39 E-value=0.069 Score=49.66 Aligned_cols=121 Identities=15% Similarity=0.134 Sum_probs=80.3
Q ss_pred CceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEc-CCC
Q psy13477 85 NLPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKAD-SCD 161 (295)
Q Consensus 85 ~~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD-~c~ 161 (295)
..|.||++. +|+||++- |.. ...+..+..++. ..+..- ..++....+|.+| ..+
T Consensus 202 ~~P~giavdp~~g~ly~td--~~~--~~~I~r~~~dG~-----~~~~~~--------------~~~~~~PnGlavd~~~~ 258 (386)
T 3v65_B 202 EKPRAIALHPMEGTIYWTD--WGN--TPRIEASSMDGS-----GRRIIA--------------DTHLFWPNGLTIDYAGR 258 (386)
T ss_dssp SCEEEEEEETTTTEEEEEE--CSS--SCEEEEEETTSC-----SCEEEE--------------CSSCSCEEEEEEEGGGT
T ss_pred CCCcEEEEEcCCCeEEEec--cCC--CCEEEEEeCCCC-----CcEEEE--------------ECCCCCeeeEEEeCCCC
Confidence 458999997 78999996 322 357777776542 111100 0135567789999 589
Q ss_pred cEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCcee
Q psy13477 162 RLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIAN 241 (295)
Q Consensus 162 rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~d 241 (295)
+||+.|++. .+|..+|+..... +++ +... ...-..
T Consensus 259 ~lY~aD~~~------------~~I~~~d~dG~~~-~~~-~~~~-------------------------------~~~P~g 293 (386)
T 3v65_B 259 RMYWVDAKH------------HVIERANLDGSHR-KAV-ISQG-------------------------------LPHPFA 293 (386)
T ss_dssp EEEEEETTT------------TEEEEECTTSCSC-EEE-ECSS-------------------------------CSSEEE
T ss_pred EEEEEECCC------------CEEEEEeCCCCee-EEE-EECC-------------------------------CCCceE
Confidence 999999865 2688888864332 111 1111 124567
Q ss_pred EEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 242 IAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 242 i~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
|+|| +.++|++|.+...|.++|..+|+..++.
T Consensus 294 iav~------~~~ly~td~~~~~V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 294 ITVF------EDSLYWTDWHTKSINSANKFTGKNQEII 325 (386)
T ss_dssp EEEE------TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEEE------CCEEEEeeCCCCeEEEEECCCCcceEEE
Confidence 8887 4689999999999999997777655544
No 23
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.38 E-value=0.15 Score=43.61 Aligned_cols=123 Identities=14% Similarity=0.065 Sum_probs=77.8
Q ss_pred CceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcC-CC
Q psy13477 85 NLPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADS-CD 161 (295)
Q Consensus 85 ~~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~-c~ 161 (295)
.-|.|+++. ++++|++-.. -.++..+..++. . ...+. + .++....++.+|+ .+
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~-----~~~I~~~~~~g~-~-~~~~~--~---------------~~~~~P~~i~vd~~~g 134 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQ-----LDRIEVAKMDGT-Q-RRVLF--D---------------TGLVNPRGIVTDPVRG 134 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSC-S-CEEEE--C---------------SSCSSEEEEEEETTTT
T ss_pred CCccEEEEEecCCeEEEEECC-----CCEEEEEEcCCC-C-EEEEE--E---------------CCCCCccEEEEeeCCC
Confidence 468999996 5899998632 236777766531 0 00110 1 1234457899998 68
Q ss_pred cEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCcee
Q psy13477 162 RLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIAN 241 (295)
Q Consensus 162 rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~d 241 (295)
+||+.|.+.- ..+|..+++.... .+.+ ... ....-+.
T Consensus 135 ~lyv~~~~~~----------~~~I~~~~~dg~~-~~~~-~~~-------------------------------~~~~P~g 171 (267)
T 1npe_A 135 NLYWTDWNRD----------NPKIETSHMDGTN-RRIL-AQD-------------------------------NLGLPNG 171 (267)
T ss_dssp EEEEEECCSS----------SCEEEEEETTSCC-CEEE-ECT-------------------------------TCSCEEE
T ss_pred EEEEEECCCC----------CcEEEEEecCCCC-cEEE-EEC-------------------------------CCCCCcE
Confidence 9999997741 2467778875432 1111 111 1135678
Q ss_pred EEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEE
Q psy13477 242 IAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRA 278 (295)
Q Consensus 242 i~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv 278 (295)
|++|. ++.++|++|.+...|.++|+..+....+
T Consensus 172 ia~d~----~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 204 (267)
T 1npe_A 172 LTFDA----FSSQLCWVDAGTHRAECLNPAQPGRRKV 204 (267)
T ss_dssp EEEET----TTTEEEEEETTTTEEEEEETTEEEEEEE
T ss_pred EEEcC----CCCEEEEEECCCCEEEEEecCCCceEEE
Confidence 99985 2579999999999999999976543333
No 24
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.34 E-value=0.052 Score=46.71 Aligned_cols=83 Identities=8% Similarity=0.044 Sum_probs=63.2
Q ss_pred EEeEEEEcCCC-cEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCC
Q psy13477 151 TTYRIKADSCD-RLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFR 229 (295)
Q Consensus 151 sV~~i~iD~c~-rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~ 229 (295)
.++.+.+++++ +||+.+.+.... ....+|.+||+.++++++++..+..
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~------~~~~~v~~~d~~~~~~~~~~~~~~~------------------------- 90 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKL------DKGGVVYRLDPVTLEVTQAIHNDLK------------------------- 90 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTT------EESEEEEEECTTTCCEEEEEEESSC-------------------------
T ss_pred CccceEECCCCCEEEEEcCCCcCC------CCCccEEEEcCCCCeEEEEEecCCC-------------------------
Confidence 35677888875 788888765321 1245899999999999999987553
Q ss_pred CcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEE
Q psy13477 230 PEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWR 277 (295)
Q Consensus 230 ~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swR 277 (295)
...++++. ++.++|+++.....|.+||.++++..+
T Consensus 91 ---------~~~~~~s~----dg~~l~v~~~~~~~v~~~d~~~~~~~~ 125 (353)
T 3vgz_A 91 ---------PFGATINN----TTQTLWFGNTVNSAVTAIDAKTGEVKG 125 (353)
T ss_dssp ---------CCSEEEET----TTTEEEEEETTTTEEEEEETTTCCEEE
T ss_pred ---------cceEEECC----CCCEEEEEecCCCEEEEEeCCCCeeEE
Confidence 34567774 357899999998999999999998744
No 25
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.30 E-value=0.086 Score=49.44 Aligned_cols=121 Identities=17% Similarity=0.189 Sum_probs=78.5
Q ss_pred CceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEc-CCC
Q psy13477 85 NLPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKAD-SCD 161 (295)
Q Consensus 85 ~~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD-~c~ 161 (295)
.-|.||++. +|+||+|- |. ....+..+..++. ..+-.- ..+|....+|.+| ..+
T Consensus 202 ~~P~~iavdp~~g~ly~td--~~--~~~~I~~~~~dG~-----~~~~~~--------------~~~l~~P~glavd~~~~ 258 (400)
T 3p5b_L 202 SKPRAIVVDPVHGFMYWTD--WG--TPAKIKKGGLNGV-----DIYSLV--------------TENIQWPNGITLDLLSG 258 (400)
T ss_dssp CCEEEEEEETTTTEEEEEE--CS--SSCCEEEEETTSC-----SCEEEE--------------CSSCSCEEEEEEETTTT
T ss_pred CCcceEEEecccCeEEEEe--CC--CCCEEEEEeCCCC-----ccEEEE--------------ECCCCceEEEEEEeCCC
Confidence 348999996 78999997 42 2346777776542 111110 0245667889999 578
Q ss_pred cEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCcee
Q psy13477 162 RLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIAN 241 (295)
Q Consensus 162 rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~d 241 (295)
+|++.|++. .+|..+|+....+.....-+.. -..-..
T Consensus 259 ~lY~aD~~~------------~~I~~~d~dG~~~~~~~~~~~~-------------------------------l~~P~g 295 (400)
T 3p5b_L 259 RLYWVDSKL------------HSISSIDVNGGNRKTILEDEKR-------------------------------LAHPFS 295 (400)
T ss_dssp EEEEEETTT------------TEEEEEETTSCCCEEEEECSST-------------------------------TSSEEE
T ss_pred EEEEEECCC------------CEEEEEeCCCCccEEEEeCCCC-------------------------------CCCCEE
Confidence 999999874 2688899865433222221111 112346
Q ss_pred EEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEE
Q psy13477 242 IAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWR 277 (295)
Q Consensus 242 i~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swR 277 (295)
|+|+ +.++|++|.....|.++|..+|+..+
T Consensus 296 l~v~------~~~lywtd~~~~~V~~~~~~~G~~~~ 325 (400)
T 3p5b_L 296 LAVF------EDKVFWTDIINEAIFSANRLTGSDVN 325 (400)
T ss_dssp EEEE------TTEEEEEESSSCSEEEEESSSCCCCE
T ss_pred EEEe------CCEEEEecCCCCeEEEEEcCCCCceE
Confidence 6776 46899999999999999977775443
No 26
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.29 E-value=0.11 Score=47.12 Aligned_cols=124 Identities=19% Similarity=0.183 Sum_probs=84.7
Q ss_pred CCCceeeeEEeCCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCCc
Q psy13477 83 ENNLPVGIEVWRNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCDR 162 (295)
Q Consensus 83 ~n~~p~gi~v~~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~r 162 (295)
......|+++.++|+|+.. |+++ ++-.++.+.- . --.-.|||... -+|. -| .++
T Consensus 63 ~~~fgeGi~~~~~~ly~lt--w~~~---~v~v~D~~tl-~-~~~ti~~~~~G------------wglt------~d-g~~ 116 (243)
T 3mbr_X 63 PPYFGAGIVAWRDRLIQLT--WRNH---EGFVYDLATL-T-PRARFRYPGEG------------WALT------SD-DSH 116 (243)
T ss_dssp TTCCEEEEEEETTEEEEEE--SSSS---EEEEEETTTT-E-EEEEEECSSCC------------CEEE------EC-SSC
T ss_pred CCcceeEEEEeCCEEEEEE--eeCC---EEEEEECCcC-c-EEEEEeCCCCc------------eEEe------eC-CCE
Confidence 3445688999999999996 8765 4555554310 0 00123555311 1232 23 579
Q ss_pred EEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeE
Q psy13477 163 LWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANI 242 (295)
Q Consensus 163 LWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di 242 (295)
|||=| |. .+|.++|.+|.++++++..... -.+-.++|.+
T Consensus 117 L~vSd-gs------------~~l~~iDp~t~~~~~~I~V~~~----------------------------g~~~~~lNeL 155 (243)
T 3mbr_X 117 LYMSD-GT------------AVIRKLDPDTLQQVGSIKVTAG----------------------------GRPLDNLNEL 155 (243)
T ss_dssp EEEEC-SS------------SEEEEECTTTCCEEEEEECEET----------------------------TEECCCEEEE
T ss_pred EEEEC-CC------------CeEEEEeCCCCeEEEEEEEccC----------------------------Ccccccceee
Confidence 99988 53 2799999999999999998653 1233467776
Q ss_pred EEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 243 AVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 243 ~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
... ++.+|+..-....|+|.|.++|+--...
T Consensus 156 e~~------~G~lyanvw~s~~I~vIDp~tG~V~~~i 186 (243)
T 3mbr_X 156 EWV------NGELLANVWLTSRIARIDPASGKVVAWI 186 (243)
T ss_dssp EEE------TTEEEEEETTTTEEEEECTTTCBEEEEE
T ss_pred EEe------CCEEEEEECCCCeEEEEECCCCCEEEEE
Confidence 644 5789999988899999999999976654
No 27
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.29 E-value=0.12 Score=46.52 Aligned_cols=123 Identities=17% Similarity=0.203 Sum_probs=80.8
Q ss_pred CceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcC-CC
Q psy13477 85 NLPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADS-CD 161 (295)
Q Consensus 85 ~~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~-c~ 161 (295)
.-|.|+++. +|+||++- | |-...+..+..++. ..+..-. ..+....++.+|. .+
T Consensus 120 ~~P~~iavdp~~g~ly~~d--~--~~~~~I~~~~~dG~-----~~~~~~~--------------~~~~~P~gla~d~~~~ 176 (316)
T 1ijq_A 120 SKPRAIVVDPVHGFMYWTD--W--GTPAKIKKGGLNGV-----DIYSLVT--------------ENIQWPNGITLDLLSG 176 (316)
T ss_dssp CCEEEEEEETTTTEEEEEE--C--SSSCEEEEEETTSC-----CEEEEEC--------------SSCSCEEEEEEETTTT
T ss_pred CCcceEEeCCCCCEEEEEc--c--CCCCeEEEEcCCCC-----CeEEEEE--------------CCCCCceEEEEeccCC
Confidence 458999996 78999986 3 22357777776542 1111100 1355678899994 68
Q ss_pred cEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCcee
Q psy13477 162 RLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIAN 241 (295)
Q Consensus 162 rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~d 241 (295)
+||+.|++. .+|..+|+....+..-...+.. ...-..
T Consensus 177 ~lY~~D~~~------------~~I~~~d~dg~~~~~~~~~~~~-------------------------------~~~P~g 213 (316)
T 1ijq_A 177 RLYWVDSKL------------HSISSIDVNGGNRKTILEDEKR-------------------------------LAHPFS 213 (316)
T ss_dssp EEEEEETTT------------TEEEEEETTSCSCEEEEECTTT-------------------------------TSSEEE
T ss_pred EEEEEECCC------------CeEEEEecCCCceEEEeecCCc-------------------------------cCCcEE
Confidence 999999874 2688899875332211122111 123467
Q ss_pred EEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 242 IAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 242 i~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
|+|| ++++|++|.+...|.++|..+|+..+..
T Consensus 214 iav~------~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 214 LAVF------EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEE------TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEE------CCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 8887 4689999999999999999888755543
No 28
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.17 E-value=0.11 Score=54.02 Aligned_cols=122 Identities=17% Similarity=0.216 Sum_probs=79.5
Q ss_pred ceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEc-CCCc
Q psy13477 86 LPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKAD-SCDR 162 (295)
Q Consensus 86 ~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD-~c~r 162 (295)
-|.||+|. +|+||+|- | |....+..+..++. ..+-.- ..+|....+|.+| ..++
T Consensus 515 ~P~gIaVDp~~g~LYwtD--~--g~~~~I~~~~~dG~-----~~~~lv--------------~~~l~~P~GLavD~~~~~ 571 (791)
T 3m0c_C 515 KPRAIVVDPVHGFMYWTD--W--GTPAKIKKGGLNGV-----DIYSLV--------------TENIQWPNGITLDLLSGR 571 (791)
T ss_dssp CEEEEEEETTTTEEEEEE--C--SSSCEEEEEETTSC-----CEEEEE--------------CSSCSCEEEEEEETTTTE
T ss_pred CcceEEEecCCCCEEEec--C--CCCCeEEEEecCCC-----ceEEEE--------------eCCCCCceEEEEecCCCe
Confidence 49999996 69999997 4 33357777776542 111110 0246678899999 6899
Q ss_pred EEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeE
Q psy13477 163 LWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANI 242 (295)
Q Consensus 163 LWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di 242 (295)
|++.|.+. .+|..+|+....+...+.-... + ..-..|
T Consensus 572 LYwaD~~~------------~~I~~~d~dG~~~~~v~~~~~~----------------------------l---~~P~gl 608 (791)
T 3m0c_C 572 LYWVDSKL------------HSISSIDVNGGNRKTILEDEKR----------------------------L---AHPFSL 608 (791)
T ss_dssp EEEEETTT------------TEEEEEETTSCSCEEEEECTTT----------------------------T---SSEEEE
T ss_pred EEEEeCCC------------CcEEEEecCCCceEEEecCCCc----------------------------c---CCCCEE
Confidence 99999764 2688899865443322211111 0 112244
Q ss_pred EEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 243 AVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 243 ~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
+++ +.++|+||.....|.++|..+|+..++.
T Consensus 609 av~------~~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 609 AVF------EDKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEE------TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEe------CCEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 554 4599999999999999998888655544
No 29
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.10 E-value=0.046 Score=45.91 Aligned_cols=80 Identities=11% Similarity=0.129 Sum_probs=58.0
Q ss_pred cEEEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccC
Q psy13477 149 LTTTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQF 228 (295)
Q Consensus 149 lvsV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~ 228 (295)
+..+.++.+|++|+|||.+.+. ..|..||++ +++ +.+.++..
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~------------~~v~~~~~~-~~~-~~~~~~~~------------------------ 60 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKA------------NKISSLDQS-GRI-KEFEVPTP------------------------ 60 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTT------------TEEEEECTT-SCE-EEEECSST------------------------
T ss_pred CCCcceeeECCCCCEEEEcCCC------------CeEEEECCC-Cce-EEEECCCC------------------------
Confidence 4567789999999999998642 368899988 655 45666542
Q ss_pred CCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 229 RPEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 229 ~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
......|++|. ++.+|+++....+|.+||.+ ++..++.
T Consensus 61 -------~~~~~~i~~~~-----~g~l~v~~~~~~~v~~~d~~-g~~~~~~ 98 (300)
T 2qc5_A 61 -------DAKVMCLIVSS-----LGDIWFTENGANKIGKLSKK-GGFTEYP 98 (300)
T ss_dssp -------TCCEEEEEECT-----TSCEEEEETTTTEEEEECTT-SCEEEEE
T ss_pred -------CCcceeEEECC-----CCCEEEEecCCCeEEEECCC-CCeEEec
Confidence 12466788873 45689999888889999988 6654443
No 30
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.05 E-value=0.2 Score=45.64 Aligned_cols=122 Identities=15% Similarity=0.092 Sum_probs=81.0
Q ss_pred CCceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcC-C
Q psy13477 84 NNLPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADS-C 160 (295)
Q Consensus 84 n~~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~-c 160 (295)
-.-|.|+++. +|+||+|-.. ....+..+..++. . ...+. ..++....++.+|. .
T Consensus 121 ~~~P~giavdp~~g~ly~td~~----~~~~I~r~~~dG~-~-~~~~~-----------------~~~l~~Pnglavd~~~ 177 (318)
T 3sov_A 121 LDQPRAIALDPSSGFMYWTDWG----EVPKIERAGMDGS-S-RFIII-----------------NSEIYWPNGLTLDYEE 177 (318)
T ss_dssp CSSEEEEEEEGGGTEEEEEECS----SSCEEEEEETTSC-S-CEEEE-----------------CSSCSCEEEEEEETTT
T ss_pred CCCccEEEEeCCCCEEEEEecC----CCCEEEEEEcCCC-C-eEEEE-----------------ECCCCCccEEEEeccC
Confidence 3458999996 7999999732 2346777776542 0 00110 01356678999996 7
Q ss_pred CcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCce
Q psy13477 161 DRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIA 240 (295)
Q Consensus 161 ~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~ 240 (295)
++||+.|++. .+|..+|+..... +.+. ... ...-.
T Consensus 178 ~~lY~aD~~~------------~~I~~~d~dG~~~-~~~~-~~~-------------------------------~~~P~ 212 (318)
T 3sov_A 178 QKLYWADAKL------------NFIHKSNLDGTNR-QAVV-KGS-------------------------------LPHPF 212 (318)
T ss_dssp TEEEEEETTT------------TEEEEEETTSCSC-EEEE-CSC-------------------------------CSCEE
T ss_pred CEEEEEECCC------------CEEEEEcCCCCce-EEEe-cCC-------------------------------CCCce
Confidence 8999999864 2588888864322 1211 111 12446
Q ss_pred eEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 241 NIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 241 di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
.|+|| +..+|++|.+...|.++|..+|+..+..
T Consensus 213 glav~------~~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 213 ALTLF------EDILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp EEEEE------TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEEEe------CCEEEEEecCCCeEEEEECCCCCceEEE
Confidence 78888 3589999999999999999888765544
No 31
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.05 E-value=0.075 Score=45.71 Aligned_cols=64 Identities=13% Similarity=0.147 Sum_probs=49.5
Q ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELA 262 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~ 262 (295)
-+|.+||+.++++++++.++.. .+......++++. ++.++|+++...
T Consensus 206 ~~i~~~d~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~s~----dg~~l~~~~~~~ 252 (353)
T 3vgz_A 206 GELITIDTADNKILSRKKLLDD-----------------------------GKEHFFINISLDT----ARQRAFITDSKA 252 (353)
T ss_dssp SEEEEEETTTTEEEEEEECCCS-----------------------------SSCCCEEEEEEET----TTTEEEEEESSS
T ss_pred CeEEEEECCCCeEEEEEEcCCC-----------------------------CCCcccceEEECC----CCCEEEEEeCCC
Confidence 4788899999998888887543 1234567788885 367899999998
Q ss_pred CeEEEEEcCCCeEEEEe
Q psy13477 263 YGLLSYSWEENTSWRAS 279 (295)
Q Consensus 263 ~gLIVydl~~~~swRv~ 279 (295)
..|.+||.++++.-+..
T Consensus 253 ~~v~~~d~~~~~~~~~~ 269 (353)
T 3vgz_A 253 AEVLVVDTRNGNILAKV 269 (353)
T ss_dssp SEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCcEEEEE
Confidence 99999999998865533
No 32
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.98 E-value=0.015 Score=48.68 Aligned_cols=77 Identities=12% Similarity=0.025 Sum_probs=48.3
Q ss_pred EEeEEEEcCCCcEEE-EeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCC
Q psy13477 151 TTYRIKADSCDRLWV-LDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFR 229 (295)
Q Consensus 151 sV~~i~iD~c~rLWV-LDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~ 229 (295)
...++.+|++|+||| .|.+. ..|..||..+.+.. .+ +..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~------------~~i~~~~~~~~~~~-~~--~~~------------------------- 64 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMY------------GRVVKLATGSTGTT-VL--PFN------------------------- 64 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSS------------CEEEEECC-----E-EC--CCC-------------------------
T ss_pred CccceEECCCCCEEEEccCCC------------CcEEEecCCCcccc-eE--eeC-------------------------
Confidence 888999999999999 87643 25888888665432 11 111
Q ss_pred CcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEE
Q psy13477 230 PEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRA 278 (295)
Q Consensus 230 ~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv 278 (295)
.......|++|. ++.+|++|. ..+|.+||..++..+.+
T Consensus 65 -----~~~~p~~i~~~~-----~g~l~v~~~-~~~i~~~d~~~~~~~~~ 102 (270)
T 1rwi_B 65 -----GLYQPQGLAVDG-----AGTVYVTDF-NNRVVTLAAGSNNQTVL 102 (270)
T ss_dssp -----SCCSCCCEEECT-----TCCEEEEET-TTEEEEECTTCSCCEEC
T ss_pred -----CcCCcceeEECC-----CCCEEEEcC-CCEEEEEeCCCceEeee
Confidence 112345677773 344888887 67888888777665544
No 33
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.97 E-value=0.048 Score=47.36 Aligned_cols=79 Identities=15% Similarity=0.070 Sum_probs=56.2
Q ss_pred EEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCC
Q psy13477 151 TTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRP 230 (295)
Q Consensus 151 sV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~ 230 (295)
.+.++..|++|+||+.|+.. ..|.+||++++++.+....+.
T Consensus 46 ~~~~~~~~~~g~l~~~~~~~------------~~i~~~d~~~~~~~~~~~~~~--------------------------- 86 (333)
T 2dg1_A 46 QLEGLNFDRQGQLFLLDVFE------------GNIFKINPETKEIKRPFVSHK--------------------------- 86 (333)
T ss_dssp CEEEEEECTTSCEEEEETTT------------CEEEEECTTTCCEEEEEECSS---------------------------
T ss_pred cccCcEECCCCCEEEEECCC------------CEEEEEeCCCCcEEEEeeCCC---------------------------
Confidence 45678889999999998742 269999999988754332111
Q ss_pred cccCCCCCceeEEEeccCCCCCeEEEEEcCCC----CeEEEEEcCCCeEEEEe
Q psy13477 231 EDILPGTFIANIAVDVGKNCEDTFLYASDELA----YGLLSYSWEENTSWRAS 279 (295)
Q Consensus 231 ~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~----~gLIVydl~~~~swRv~ 279 (295)
.....|++|. ++.+|+++... .+|.+||.++++..++.
T Consensus 87 ------~~~~~i~~~~-----dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~ 128 (333)
T 2dg1_A 87 ------ANPAAIKIHK-----DGRLFVCYLGDFKSTGGIFAATENGDNLQDII 128 (333)
T ss_dssp ------SSEEEEEECT-----TSCEEEEECTTSSSCCEEEEECTTSCSCEEEE
T ss_pred ------CCcceEEECC-----CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEE
Confidence 2466777773 35688888766 68999998888766543
No 34
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.95 E-value=0.13 Score=47.69 Aligned_cols=118 Identities=17% Similarity=0.156 Sum_probs=75.8
Q ss_pred CceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcC-CC
Q psy13477 85 NLPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADS-CD 161 (295)
Q Consensus 85 ~~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~-c~ 161 (295)
.-|.|+++. .++||++-.. . .++..+..++. ....+. . .++....+|.+|+ .+
T Consensus 159 ~~p~glavd~~~g~lY~~d~~--~---~~I~~~~~dg~--~~~~l~-------~----------~~l~~P~giavdp~~g 214 (386)
T 3v65_B 159 ESPGGLAVDWVHDKLYWTDSG--T---SRIEVANLDGA--HRKVLL-------W----------QSLEKPRAIALHPMEG 214 (386)
T ss_dssp SCCCCEEEETTTTEEEEEETT--T---TEEEECBTTSC--SCEEEE-------C----------SSCSCEEEEEEETTTT
T ss_pred CCccEEEEEeCCCeEEEEcCC--C---CeEEEEeCCCC--ceEEee-------c----------CCCCCCcEEEEEcCCC
Confidence 358999996 7899998633 1 25655555431 000110 0 1355678999995 78
Q ss_pred cEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCcee
Q psy13477 162 RLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIAN 241 (295)
Q Consensus 162 rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~d 241 (295)
+||+.|.|. .++|..+|+...... .+ +... -..-+.
T Consensus 215 ~ly~td~~~-----------~~~I~r~~~dG~~~~-~~-~~~~-------------------------------~~~PnG 250 (386)
T 3v65_B 215 TIYWTDWGN-----------TPRIEASSMDGSGRR-II-ADTH-------------------------------LFWPNG 250 (386)
T ss_dssp EEEEEECSS-----------SCEEEEEETTSCSCE-EE-ECSS-------------------------------CSCEEE
T ss_pred eEEEeccCC-----------CCEEEEEeCCCCCcE-EE-EECC-------------------------------CCCeee
Confidence 899999765 257888888654321 11 1111 124578
Q ss_pred EEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCe
Q psy13477 242 IAVDVGKNCEDTFLYASDELAYGLLSYSWEENT 274 (295)
Q Consensus 242 i~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~ 274 (295)
|++|.. ++.+|++|.....|.++|+....
T Consensus 251 lavd~~----~~~lY~aD~~~~~I~~~d~dG~~ 279 (386)
T 3v65_B 251 LTIDYA----GRRMYWVDAKHHVIERANLDGSH 279 (386)
T ss_dssp EEEEGG----GTEEEEEETTTTEEEEECTTSCS
T ss_pred EEEeCC----CCEEEEEECCCCEEEEEeCCCCe
Confidence 999863 57899999988889999986543
No 35
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.93 E-value=0.17 Score=44.13 Aligned_cols=128 Identities=7% Similarity=0.080 Sum_probs=78.7
Q ss_pred CceeeeEEe-CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCCcE
Q psy13477 85 NLPVGIEVW-RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCDRL 163 (295)
Q Consensus 85 ~~p~gi~v~-~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~rL 163 (295)
..|.++... +|+++++. . ..|..+..+. ..++.+..-. .......+..+.+|++|+|
T Consensus 54 ~~~~~i~~~~dG~l~v~~---~----~~l~~~d~~~-----g~~~~~~~~~----------~~~~~~~~~di~~d~dG~l 111 (297)
T 3g4e_A 54 APVSSVALRQSGGYVATI---G----TKFCALNWKE-----QSAVVLATVD----------NDKKNNRFNDGKVDPAGRY 111 (297)
T ss_dssp SCEEEEEEBTTSSEEEEE---T----TEEEEEETTT-----TEEEEEEECC----------TTCSSEEEEEEEECTTSCE
T ss_pred CceEEEEECCCCCEEEEE---C----CeEEEEECCC-----CcEEEEEecC----------CCCCCCCCCCEEECCCCCE
Confidence 347888887 89999986 1 2577776532 2344432211 0123577889999999999
Q ss_pred EEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEE
Q psy13477 164 WVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIA 243 (295)
Q Consensus 164 WVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~ 243 (295)
|+-+.+.-.... .......+|..+|.. +++.+.. .. ...-+.|+
T Consensus 112 ~~~~~~~~~~~~-~~~~~~~~l~~~d~~-g~~~~~~---~~-------------------------------~~~pngi~ 155 (297)
T 3g4e_A 112 FAGTMAEETAPA-VLERHQGALYSLFPD-HHVKKYF---DQ-------------------------------VDISNGLD 155 (297)
T ss_dssp EEEEEECCSBTT-BCCTTCEEEEEECTT-SCEEEEE---EE-------------------------------ESBEEEEE
T ss_pred EEecCCcccccc-cccCCCcEEEEEECC-CCEEEEe---ec-------------------------------cccccceE
Confidence 998876532110 011233578888764 3433211 11 02346778
Q ss_pred EeccCCCCCeEEEEEcCCCCeEEEEEc--CCCe
Q psy13477 244 VDVGKNCEDTFLYASDELAYGLLSYSW--EENT 274 (295)
Q Consensus 244 VD~~~~c~~~~aYItD~~~~gLIVydl--~~~~ 274 (295)
++. ++.++|++|.....|.+||+ ++|+
T Consensus 156 ~sp----dg~~lyv~~~~~~~i~~~~~d~~~G~ 184 (297)
T 3g4e_A 156 WSL----DHKIFYYIDSLSYSVDAFDYDLQTGQ 184 (297)
T ss_dssp ECT----TSCEEEEEEGGGTEEEEEEECTTTCC
T ss_pred EcC----CCCEEEEecCCCCcEEEEeccCCCCc
Confidence 874 35689999998889999987 5554
No 36
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.92 E-value=0.22 Score=45.37 Aligned_cols=118 Identities=15% Similarity=0.118 Sum_probs=76.9
Q ss_pred CceeeeEEe-CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCCcE
Q psy13477 85 NLPVGIEVW-RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCDRL 163 (295)
Q Consensus 85 ~~p~gi~v~-~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~rL 163 (295)
..|.|+++. +|++|++-.... -.+|..|+... +. .++-.|- + .. ....++.+| .++|
T Consensus 21 ~f~~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~t-g~---v~~~i~l------~----~~----~fgeGi~~~-g~~l 78 (266)
T 2iwa_A 21 AFTQGLVYAENDTLFESTGLYG---RSSVRQVALQT-GK---VENIHKM------D----DS----YFGEGLTLL-NEKL 78 (266)
T ss_dssp CCEEEEEECSTTEEEEEECSTT---TCEEEEEETTT-CC---EEEEEEC------C----TT----CCEEEEEEE-TTEE
T ss_pred CCcccEEEeCCCeEEEECCCCC---CCEEEEEECCC-CC---EEEEEec------C----CC----cceEEEEEe-CCEE
Confidence 458999998 499999986542 36898888642 11 2222210 0 00 111245555 4799
Q ss_pred EEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcC-CCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeE
Q psy13477 164 WVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFR-PEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANI 242 (295)
Q Consensus 164 WVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p-~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di 242 (295)
|+++-.. -.+.++|++|.++++++..+ ++ +.. +
T Consensus 79 yv~t~~~------------~~v~viD~~t~~v~~~i~~g~~~-------------------------------g~g---l 112 (266)
T 2iwa_A 79 YQVVWLK------------NIGFIYDRRTLSNIKNFTHQMKD-------------------------------GWG---L 112 (266)
T ss_dssp EEEETTC------------SEEEEEETTTTEEEEEEECCSSS-------------------------------CCE---E
T ss_pred EEEEecC------------CEEEEEECCCCcEEEEEECCCCC-------------------------------eEE---E
Confidence 9997532 36999999999999999887 43 111 3
Q ss_pred EEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEE
Q psy13477 243 AVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWR 277 (295)
Q Consensus 243 ~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swR 277 (295)
.-| +..+|++| +...|.|+|.++.+--+
T Consensus 113 t~D------g~~l~vs~-gs~~l~viD~~t~~v~~ 140 (266)
T 2iwa_A 113 ATD------GKILYGSD-GTSILYEIDPHTFKLIK 140 (266)
T ss_dssp EEC------SSSEEEEC-SSSEEEEECTTTCCEEE
T ss_pred EEC------CCEEEEEC-CCCeEEEEECCCCcEEE
Confidence 333 46688888 67788888888876544
No 37
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.90 E-value=0.14 Score=46.82 Aligned_cols=118 Identities=16% Similarity=0.130 Sum_probs=77.4
Q ss_pred CceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcC-CC
Q psy13477 85 NLPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADS-CD 161 (295)
Q Consensus 85 ~~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~-c~ 161 (295)
..|.|+++. +++||++-.. ..++..+..++. ..+..- . ..+....+|.+|+ .+
T Consensus 116 ~~p~glavd~~~g~ly~~d~~-----~~~I~~~~~dG~-----~~~~l~----~----------~~l~~P~~iavdp~~g 171 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSG-----TSRIEVANLDGA-----HRKVLL----W----------QSLEKPRAIALHPMEG 171 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETT-----TTEEEEEETTSC-----SCEEEE----C----------TTCSCEEEEEEETTTT
T ss_pred CCccEEEEecCCCeEEEEcCC-----CCeEEEEcCCCC-----ceEEEE----e----------CCCCCcceEEEecCcC
Confidence 358999996 7899998632 236777776532 111100 0 1355678899996 78
Q ss_pred cEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCcee
Q psy13477 162 RLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIAN 241 (295)
Q Consensus 162 rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~d 241 (295)
+||+.|.|. .++|..+|+...... . +-.. ....-+.
T Consensus 172 ~ly~td~~~-----------~~~I~r~~~dG~~~~-~--~~~~------------------------------~~~~PnG 207 (349)
T 3v64_C 172 TIYWTDWGN-----------TPRIEASSMDGSGRR-I--IADT------------------------------HLFWPNG 207 (349)
T ss_dssp EEEEEECSS-----------SCEEEEEETTSCSCE-E--SCCS------------------------------SCSCEEE
T ss_pred eEEEeccCC-----------CCEEEEEeCCCCCcE-E--EEEC------------------------------CCCCcce
Confidence 899999875 357888888653221 1 1111 1134678
Q ss_pred EEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCe
Q psy13477 242 IAVDVGKNCEDTFLYASDELAYGLLSYSWEENT 274 (295)
Q Consensus 242 i~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~ 274 (295)
|++|.. ++.+|++|.....|-++|+....
T Consensus 208 la~d~~----~~~lY~aD~~~~~I~~~~~dG~~ 236 (349)
T 3v64_C 208 LTIDYA----GRRMYWVDAKHHVIERANLDGSH 236 (349)
T ss_dssp EEEETT----TTEEEEEETTTTEEEEEETTSCS
T ss_pred EEEeCC----CCEEEEEECCCCEEEEEeCCCCc
Confidence 999963 57899999998899999987543
No 38
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.87 E-value=0.093 Score=45.09 Aligned_cols=37 Identities=14% Similarity=0.138 Sum_probs=29.4
Q ss_pred ceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 239 IANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 239 l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
...++++. ++.++|+++.+...|.+||+++++..++.
T Consensus 223 ~~~~~~sp----dg~~l~v~~~~~~~i~~~d~~~~~~~~~~ 259 (331)
T 3u4y_A 223 PGTIVVSR----DGSTVYVLTESTVDVFNFNQLSGTLSFVK 259 (331)
T ss_dssp CCCEEECT----TSSEEEEECSSEEEEEEEETTTTEEEEEE
T ss_pred CceEEECC----CCCEEEEEEcCCCEEEEEECCCCceeeec
Confidence 45677764 36789999998889999999999885554
No 39
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.86 E-value=0.073 Score=46.53 Aligned_cols=83 Identities=12% Similarity=0.222 Sum_probs=57.4
Q ss_pred cEEEeEEEEcCCCc-EEEEeCCCCCCCCCccccCCceEEEEEC--CCCcEEEE---EEcCCCCCCCCceeeeeecchhhh
Q psy13477 149 LTTTYRIKADSCDR-LWVLDSGTVGIGNTTKQICPYAIHVFDL--KTDRRIRK---YQFRPEDILPGTFIANIAVDTDRR 222 (295)
Q Consensus 149 lvsV~~i~iD~c~r-LWVLDtG~~~~~~~~~~~~~pKLvvfDL--~td~lir~---y~~p~~~~~~~~~~~~ia~~~~~~ 222 (295)
+....++.++++++ ||+.|++. -+|.+||+ .++++..+ +.++..
T Consensus 148 ~~~pngi~~spdg~~lyv~~~~~------------~~i~~~~~d~~~G~~~~~~~~~~~~~~------------------ 197 (297)
T 3g4e_A 148 VDISNGLDWSLDHKIFYYIDSLS------------YSVDAFDYDLQTGQISNRRSVYKLEKE------------------ 197 (297)
T ss_dssp ESBEEEEEECTTSCEEEEEEGGG------------TEEEEEEECTTTCCEEEEEEEEECCGG------------------
T ss_pred cccccceEEcCCCCEEEEecCCC------------CcEEEEeccCCCCcccCcEEEEECCCC------------------
Confidence 33456788888875 99999864 25788887 56765422 122221
Q ss_pred hccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 223 IRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 223 ~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
......|++|. ++.+|+++..+..|.+||.++|+.-+..
T Consensus 198 -------------~~~p~g~~~d~-----~G~lwva~~~~~~v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 198 -------------EQIPDGMCIDA-----EGKLWVACYNGGRVIRLDPVTGKRLQTV 236 (297)
T ss_dssp -------------GCEEEEEEEBT-----TSCEEEEEETTTEEEEECTTTCCEEEEE
T ss_pred -------------CCCCCeeEECC-----CCCEEEEEcCCCEEEEEcCCCceEEEEE
Confidence 13456789994 5689999998889999999988765433
No 40
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.83 E-value=0.054 Score=47.80 Aligned_cols=84 Identities=15% Similarity=0.160 Sum_probs=56.7
Q ss_pred EeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCc
Q psy13477 152 TYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPE 231 (295)
Q Consensus 152 V~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~ 231 (295)
..++.+|..|+|||-+.+..... +......+|..||. .+++++.|..|..
T Consensus 231 P~gi~~d~~G~l~va~~~~~~~~--~~~~~~~~v~~~d~-~G~~~~~~~~~~g--------------------------- 280 (322)
T 2fp8_A 231 PGNIKRNADGHFWVSSSEELDGN--MHGRVDPKGIKFDE-FGNILEVIPLPPP--------------------------- 280 (322)
T ss_dssp EEEEEECTTSCEEEEEEEETTSS--TTSCEEEEEEEECT-TSCEEEEEECCTT---------------------------
T ss_pred CCCeEECCCCCEEEEecCccccc--ccCCCccEEEEECC-CCCEEEEEECCCC---------------------------
Confidence 56789999999999997732211 11112357999998 4889999988764
Q ss_pred ccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCC
Q psy13477 232 DILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEEN 273 (295)
Q Consensus 232 ~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~ 273 (295)
. .-.....++.+ ++.+||++.....|.+|+++..
T Consensus 281 ~--~~~~~~~~~~~------~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 281 F--AGEHFEQIQEH------DGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp T--TTSCCCEEEEE------TTEEEEECSSCSEEEEEEC---
T ss_pred C--ccccceEEEEe------CCEEEEeecCCCceEEEecccc
Confidence 1 11223344443 5789999999999999998754
No 41
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.80 E-value=0.11 Score=47.86 Aligned_cols=125 Identities=14% Similarity=0.076 Sum_probs=84.8
Q ss_pred CCCCceeeeEEeCCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCC
Q psy13477 82 PENNLPVGIEVWRNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCD 161 (295)
Q Consensus 82 p~n~~p~gi~v~~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~ 161 (295)
+......|+++.++++|+.. |+++ ++-.++.+.- .. -.-.|||... -+|. -| .+
T Consensus 93 ~~~~FgeGit~~g~~Ly~lt--w~~~---~v~V~D~~Tl-~~-~~ti~~~~eG------------wGLt------~D-g~ 146 (268)
T 3nok_A 93 LGNIFAEGLASDGERLYQLT--WTEG---LLFTWSGMPP-QR-ERTTRYSGEG------------WGLC------YW-NG 146 (268)
T ss_dssp CTTCCEEEEEECSSCEEEEE--SSSC---EEEEEETTTT-EE-EEEEECSSCC------------CCEE------EE-TT
T ss_pred CCCcceeEEEEeCCEEEEEE--ccCC---EEEEEECCcC-cE-EEEEeCCCce------------eEEe------cC-CC
Confidence 33445578999999999996 8665 5555554310 00 0112454211 1333 34 47
Q ss_pred cEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCcee
Q psy13477 162 RLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIAN 241 (295)
Q Consensus 162 rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~d 241 (295)
+||+-| |. .+|.++|.+|.++++++..... -.+-.++|.
T Consensus 147 ~L~vSd-Gs------------~~l~~iDp~T~~v~~~I~V~~~----------------------------g~~v~~lNe 185 (268)
T 3nok_A 147 KLVRSD-GG------------TMLTFHEPDGFALVGAVQVKLR----------------------------GQPVELINE 185 (268)
T ss_dssp EEEEEC-SS------------SEEEEECTTTCCEEEEEECEET----------------------------TEECCCEEE
T ss_pred EEEEEC-CC------------CEEEEEcCCCCeEEEEEEeCCC----------------------------Ccccccccc
Confidence 999998 52 2799999999999999998664 123346777
Q ss_pred EEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 242 IAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 242 i~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
+... ++.+|++......|.|.|.++|+--+..
T Consensus 186 Le~~------dG~lyanvw~s~~I~vIDp~TG~V~~~I 217 (268)
T 3nok_A 186 LECA------NGVIYANIWHSSDVLEIDPATGTVVGVI 217 (268)
T ss_dssp EEEE------TTEEEEEETTCSEEEEECTTTCBEEEEE
T ss_pred cEEe------CCEEEEEECCCCeEEEEeCCCCcEEEEE
Confidence 6654 5689999988899999999999876654
No 42
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.72 E-value=0.046 Score=52.09 Aligned_cols=110 Identities=15% Similarity=0.133 Sum_probs=71.0
Q ss_pred CCCccEEEeEEEEcC---CCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhh
Q psy13477 145 QCDTLTTTYRIKADS---CDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDR 221 (295)
Q Consensus 145 ~c~~lvsV~~i~iD~---c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~ 221 (295)
.|..|.+..++.+|+ .|+|||.|.+ .+|..||++++++..... . ....+.||++.+.
T Consensus 134 ~a~~~~~P~gvavd~~s~~g~Lyv~D~~-------------~~I~~id~~~g~v~~~~~--~-----~~~P~giavd~dG 193 (433)
T 4hw6_A 134 DCGAFDNIWRMMFDPNSNYDDLYWVGQR-------------DAFRHVDFVNQYVDIKTT--N-----IGQCADVNFTLNG 193 (433)
T ss_dssp SCCCCSCCCEEEECTTTTTCEEEEECBT-------------SCEEEEETTTTEEEEECC--C-----CSCEEEEEECTTC
T ss_pred HhcccCCCceEEEccccCCCEEEEEeCC-------------CCEEEEECCCCEEEEeec--C-----CCCccEEEECCCC
Confidence 455788999999997 4999999987 258889998887654322 1 1234455555542
Q ss_pred hh------------ccccCCCc-------ccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeE-EEE
Q psy13477 222 RI------------RKYQFRPE-------DILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTS-WRA 278 (295)
Q Consensus 222 ~~------------~~~~~~~~-------~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~s-wRv 278 (295)
++ +.+.+.++ .+......++++||. .++.+|++|.....|.+||.++++. ..+
T Consensus 194 ~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~----~~G~lyv~d~~~~~V~~~d~~~g~~~~~~ 266 (433)
T 4hw6_A 194 DMVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHP----QNGKIYYTRYHHAMISSYDPATGTLTEEE 266 (433)
T ss_dssp CEEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECT----TTCCEEECBTTCSEEEEECTTTCCEEEEE
T ss_pred CEEEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeC----CCCeEEEEECCCCEEEEEECCCCeEEEEE
Confidence 21 11111111 111123456678874 2578999999999999999998876 444
No 43
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.65 E-value=0.18 Score=52.33 Aligned_cols=123 Identities=15% Similarity=0.049 Sum_probs=79.6
Q ss_pred CceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCC-C
Q psy13477 85 NLPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSC-D 161 (295)
Q Consensus 85 ~~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c-~ 161 (295)
.-|.||++. .++||++=.. --++..+..++. ..+..- ...|....+|.+|.. |
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~-----~~~I~v~~ldG~-----~~~~l~--------------~~~l~~P~gIaVDp~~g 526 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSV-----LGTVSVADTKGV-----KRKTLF--------------RENGSKPRAIVVDPVHG 526 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETT-----TTEEEEEETTSS-----SEEEEE--------------ECTTCCEEEEEEETTTT
T ss_pred CCcceeeeeecCCcEEEEecC-----CCeEEEEeCCCC-----eEEEEE--------------eCCCCCcceEEEecCCC
Confidence 348999995 6799998632 236777776542 111100 023566889999974 8
Q ss_pred cEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCcee
Q psy13477 162 RLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIAN 241 (295)
Q Consensus 162 rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~d 241 (295)
+||+-|.|.. ++|..+++....+ +.+ +... -..-+.
T Consensus 527 ~LYwtD~g~~-----------~~I~~~~~dG~~~-~~l-v~~~-------------------------------l~~P~G 562 (791)
T 3m0c_C 527 FMYWTDWGTP-----------AKIKKGGLNGVDI-YSL-VTEN-------------------------------IQWPNG 562 (791)
T ss_dssp EEEEEECSSS-----------CEEEEEETTSCCE-EEE-ECSS-------------------------------CSCEEE
T ss_pred CEEEecCCCC-----------CeEEEEecCCCce-EEE-EeCC-------------------------------CCCceE
Confidence 9999998752 5788898864433 222 2221 124677
Q ss_pred EEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 242 IAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 242 i~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
|+||.. ++.+|++|.....|-++|+.......+.
T Consensus 563 LavD~~----~~~LYwaD~~~~~I~~~d~dG~~~~~v~ 596 (791)
T 3m0c_C 563 ITLDLL----SGRLYWVDSKLHSISSIDVNGGNRKTIL 596 (791)
T ss_dssp EEEETT----TTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred EEEecC----CCeEEEEeCCCCcEEEEecCCCceEEEe
Confidence 899863 5789999988888888888655444443
No 44
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=95.65 E-value=0.029 Score=53.24 Aligned_cols=109 Identities=13% Similarity=0.193 Sum_probs=69.5
Q ss_pred CCCccEEEeEEEEcC--CCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhh
Q psy13477 145 QCDTLTTTYRIKADS--CDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRR 222 (295)
Q Consensus 145 ~c~~lvsV~~i~iD~--c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~ 222 (295)
.|.+|.+...+.+|+ .++|||.|.+ .+|..||++++++..... . +.....||+|.+.+
T Consensus 132 ~~~~~~~P~~lavdp~~~g~Lyv~d~~-------------~~I~~id~~~~~v~~~~~--~-----~~~P~~ia~d~~G~ 191 (430)
T 3tc9_A 132 DCGGFGGAVWLSFDPKNHNHLYLVGEQ-------------HPTRLIDFEKEYVSTVYS--G-----LSKVRTICWTHEAD 191 (430)
T ss_dssp GCBCCSCCCEEEEETTEEEEEEEEEBT-------------EEEEEEETTTTEEEEEEC--C-----CSCEEEEEECTTSS
T ss_pred HccCCCCCCEEEECCCCCCeEEEEeCC-------------CcEEEEECCCCEEEEEec--C-----CCCcceEEEeCCCC
Confidence 455688999999994 6999999997 268899998887654332 1 12234455554422
Q ss_pred -----------hc--cccCCCc-------ccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEE
Q psy13477 223 -----------IR--KYQFRPE-------DILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWR 277 (295)
Q Consensus 223 -----------~~--~~~~~~~-------~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swR 277 (295)
++ -+.+.++ .+........++||. +++++|++|.+...|.+||..++....
T Consensus 192 ~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp----~~g~lyv~d~~~~~V~~~~~~~~~~~~ 262 (430)
T 3tc9_A 192 SMIITNDQNNNDRPNNYILTRESGFKVITELTKGQNCNGAETHP----INGELYFNSWNAGQVFRYDFTTQETTP 262 (430)
T ss_dssp EEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEECSSCCCEEECT----TTCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEEeCCCCcccceEEEEeCCCceeeeeeeccCCCceEEEEeC----CCCEEEEEECCCCEEEEEECCCCcEEE
Confidence 11 1111110 111123346677774 268899999999999999999887633
No 45
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.62 E-value=0.1 Score=47.34 Aligned_cols=107 Identities=21% Similarity=0.125 Sum_probs=61.6
Q ss_pred EEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccC--
Q psy13477 151 TTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQF-- 228 (295)
Q Consensus 151 sV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~-- 228 (295)
-++++..|. ++||+= +|. .+.-+|.++|++|+++++++.+++. -|=+-|+.+.+ +-||-
T Consensus 22 ftqGL~~~~-~~Lyes-tG~---------~g~S~v~~vD~~tgkv~~~~~l~~~-----~fgeGi~~~~~---~ly~ltw 82 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYES-TGE---------TGRSSVRKVDLETGRILQRAEVPPP-----YFGAGIVAWRD---RLIQLTW 82 (243)
T ss_dssp CEEEEEEET-TEEEEE-ECC---------TTSCEEEEEETTTCCEEEEEECCTT-----CCEEEEEEETT---EEEEEES
T ss_pred ccccEEEEC-CEEEEE-CCC---------CCCceEEEEECCCCCEEEEEeCCCC-----cceeEEEEeCC---EEEEEEe
Confidence 357788876 899982 222 1234799999999999999999986 23343444322 12221
Q ss_pred CCccc---CC--CCCceeEEEeccCC---C-CCeEEEEEcCCCCeEEEEEcCCCeEEEE
Q psy13477 229 RPEDI---LP--GTFIANIAVDVGKN---C-EDTFLYASDELAYGLLSYSWEENTSWRA 278 (295)
Q Consensus 229 ~~~~~---~~--~S~l~di~VD~~~~---c-~~~~aYItD~~~~gLIVydl~~~~swRv 278 (295)
+...+ -. ...+..|...- .+ | ++..+|+|| +...|.++|-++.+--+-
T Consensus 83 ~~~~v~v~D~~tl~~~~ti~~~~-~Gwglt~dg~~L~vSd-gs~~l~~iDp~t~~~~~~ 139 (243)
T 3mbr_X 83 RNHEGFVYDLATLTPRARFRYPG-EGWALTSDDSHLYMSD-GTAVIRKLDPDTLQQVGS 139 (243)
T ss_dssp SSSEEEEEETTTTEEEEEEECSS-CCCEEEECSSCEEEEC-SSSEEEEECTTTCCEEEE
T ss_pred eCCEEEEEECCcCcEEEEEeCCC-CceEEeeCCCEEEEEC-CCCeEEEEeCCCCeEEEE
Confidence 00000 00 01112222111 11 2 366788888 577888888888776553
No 46
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.60 E-value=0.048 Score=46.56 Aligned_cols=130 Identities=12% Similarity=0.024 Sum_probs=77.7
Q ss_pred CceeeeEEe-CCcEEEEeccCC--CCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCC-
Q psy13477 85 NLPVGIEVW-RNKLFVTVPRWE--DGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSC- 160 (295)
Q Consensus 85 ~~p~gi~v~-~gRiFvT~PR~~--~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c- 160 (295)
..|.++.+. +|++|++.|.-. +.-..+|..+.... ..++.+..-... .....+.++.+|.+
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~-----g~~~~~~~~~~~----------~~~~~~~~i~~~~~~ 82 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKT-----GKKTVICKPEVN----------GYGGIPAGCQCDRDA 82 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTT-----CCEEEEECCEET----------TEECCEEEEEECSSS
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCC-----CcEEEEEecccC----------CCCCCCceEEEecCC
Confidence 357888886 889999844210 11123566665321 133333210000 01234778899999
Q ss_pred CcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEE-EEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCc
Q psy13477 161 DRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRK-YQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFI 239 (295)
Q Consensus 161 ~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~-y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l 239 (295)
|+|||.+.+. .|..||++ +++.+. ...... .+....
T Consensus 83 g~l~v~~~~~-------------~l~~~d~~-g~~~~~~~~~~~~-----------------------------~~~~~~ 119 (314)
T 1pjx_A 83 NQLFVADMRL-------------GLLVVQTD-GTFEEIAKKDSEG-----------------------------RRMQGC 119 (314)
T ss_dssp SEEEEEETTT-------------EEEEEETT-SCEEECCSBCTTS-----------------------------CBCBCC
T ss_pred CcEEEEECCC-------------CEEEEeCC-CCEEEEEeccCCC-----------------------------ccccCC
Confidence 9999998731 58999998 775422 111111 123457
Q ss_pred eeEEEeccCCCCCeEEEEEcCCC---------------CeEEEEEcCCCeEEEE
Q psy13477 240 ANIAVDVGKNCEDTFLYASDELA---------------YGLLSYSWEENTSWRA 278 (295)
Q Consensus 240 ~di~VD~~~~c~~~~aYItD~~~---------------~gLIVydl~~~~swRv 278 (295)
++|++|. ++.+|+++... .+|.+||.+ ++..++
T Consensus 120 ~~i~~d~-----~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (314)
T 1pjx_A 120 NDCAFDY-----EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV 167 (314)
T ss_dssp CEEEECT-----TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE
T ss_pred cCEEECC-----CCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe
Confidence 8899984 45689998865 589999877 655443
No 47
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.50 E-value=0.12 Score=44.72 Aligned_cols=125 Identities=15% Similarity=0.029 Sum_probs=76.0
Q ss_pred ceeeeEEe-CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCCcEE
Q psy13477 86 LPVGIEVW-RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCDRLW 164 (295)
Q Consensus 86 ~p~gi~v~-~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~rLW 164 (295)
.|.++.+. +|++|++--. . .+|..++.+. ..++.+.. .. -..+..+..|++|+||
T Consensus 46 ~~~~~~~~~~g~l~~~~~~--~---~~i~~~d~~~-----~~~~~~~~----~~----------~~~~~~i~~~~dg~l~ 101 (333)
T 2dg1_A 46 QLEGLNFDRQGQLFLLDVF--E---GNIFKINPET-----KEIKRPFV----SH----------KANPAAIKIHKDGRLF 101 (333)
T ss_dssp CEEEEEECTTSCEEEEETT--T---CEEEEECTTT-----CCEEEEEE----CS----------SSSEEEEEECTTSCEE
T ss_pred cccCcEECCCCCEEEEECC--C---CEEEEEeCCC-----CcEEEEee----CC----------CCCcceEEECCCCcEE
Confidence 47888886 8899886422 2 2676665432 12333211 00 0236788899999999
Q ss_pred EEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEE
Q psy13477 165 VLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAV 244 (295)
Q Consensus 165 VLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~V 244 (295)
|.+.+... ....|.+||++++++.+.+ ... ..+...++|++
T Consensus 102 v~~~~~~~--------~~~~i~~~d~~~~~~~~~~--~~~-----------------------------~~~~~~~~i~~ 142 (333)
T 2dg1_A 102 VCYLGDFK--------STGGIFAATENGDNLQDII--EDL-----------------------------STAYCIDDMVF 142 (333)
T ss_dssp EEECTTSS--------SCCEEEEECTTSCSCEEEE--CSS-----------------------------SSCCCEEEEEE
T ss_pred EEeCCCCC--------CCceEEEEeCCCCEEEEEE--ccC-----------------------------ccCCcccceEE
Confidence 99876521 1247999999998865332 211 12235677777
Q ss_pred eccCCCCCeEEEEEcCC------CCeEEEEEcCCCeEEEE
Q psy13477 245 DVGKNCEDTFLYASDEL------AYGLLSYSWEENTSWRA 278 (295)
Q Consensus 245 D~~~~c~~~~aYItD~~------~~gLIVydl~~~~swRv 278 (295)
|. ++.+|+++.. ..+|.+||.++++..++
T Consensus 143 d~-----~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 143 DS-----KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp CT-----TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred CC-----CCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 73 3457777764 35677777776655544
No 48
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.45 E-value=0.35 Score=45.25 Aligned_cols=122 Identities=15% Similarity=0.058 Sum_probs=78.1
Q ss_pred CceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcC-CC
Q psy13477 85 NLPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADS-CD 161 (295)
Q Consensus 85 ~~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~-c~ 161 (295)
.-|.|+++. .++||++-.. . -++..+..++. ..+.. .+ ..+....+|.+|+ .|
T Consensus 159 ~~p~glavD~~~~~lY~~d~~--~---~~I~~~~~~g~-----~~~~l----~~----------~~~~~P~~iavdp~~g 214 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSV--L---GTVSVADTKGV-----KRKTL----FR----------ENGSKPRAIVVDPVHG 214 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETT--T---TEEEEECTTTC-----SEEEE----EE----------CSSCCEEEEEEETTTT
T ss_pred CCcccEEEEecCCceEEEECC--C---CeEEEEeCCCC-----ceEEE----Ee----------CCCCCcceEEEecccC
Confidence 358999995 7999999633 2 25666665431 11100 01 1356678999997 68
Q ss_pred cEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCcee
Q psy13477 162 RLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIAN 241 (295)
Q Consensus 162 rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~d 241 (295)
+|++-|.|.. ++|..+|+..... +.+ +... -..-+.
T Consensus 215 ~ly~td~~~~-----------~~I~~~~~dG~~~-~~~-~~~~-------------------------------l~~P~g 250 (400)
T 3p5b_L 215 FMYWTDWGTP-----------AKIKKGGLNGVDI-YSL-VTEN-------------------------------IQWPNG 250 (400)
T ss_dssp EEEEEECSSS-----------CCEEEEETTSCSC-EEE-ECSS-------------------------------CSCEEE
T ss_pred eEEEEeCCCC-----------CEEEEEeCCCCcc-EEE-EECC-------------------------------CCceEE
Confidence 8999998742 4688888864332 121 1111 134678
Q ss_pred EEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEE
Q psy13477 242 IAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRA 278 (295)
Q Consensus 242 i~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv 278 (295)
|+||.. ++.+|++|.....|-++|+....-..+
T Consensus 251 lavd~~----~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (400)
T 3p5b_L 251 ITLDLL----SGRLYWVDSKLHSISSIDVNGGNRKTI 283 (400)
T ss_dssp EEEETT----TTEEEEEETTTTEEEEEETTSCCCEEE
T ss_pred EEEEeC----CCEEEEEECCCCEEEEEeCCCCccEEE
Confidence 999963 578999999888899999865444434
No 49
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.38 E-value=0.17 Score=46.40 Aligned_cols=123 Identities=15% Similarity=0.117 Sum_probs=84.2
Q ss_pred CCceeeeEEeCCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCCcE
Q psy13477 84 NNLPVGIEVWRNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCDRL 163 (295)
Q Consensus 84 n~~p~gi~v~~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~rL 163 (295)
.....|+++.++|+|+.. |+++ ++-.++.+.. . --.-.|||... -+|. -| .++|
T Consensus 86 ~~FgeGit~~g~~ly~lt--w~~~---~v~v~D~~t~-~-~~~ti~~~~eG------------~glt------~d-g~~L 139 (262)
T 3nol_A 86 RYFGEGISDWKDKIVGLT--WKNG---LGFVWNIRNL-R-QVRSFNYDGEG------------WGLT------HN-DQYL 139 (262)
T ss_dssp TCCEEEEEEETTEEEEEE--SSSS---EEEEEETTTC-C-EEEEEECSSCC------------CCEE------EC-SSCE
T ss_pred ccceeEEEEeCCEEEEEE--eeCC---EEEEEECccC-c-EEEEEECCCCc------------eEEe------cC-CCEE
Confidence 445678999999999996 8665 5666664311 1 00123454311 1233 23 4799
Q ss_pred EEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEE
Q psy13477 164 WVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIA 243 (295)
Q Consensus 164 WVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~ 243 (295)
|+-| |. + +|..+|.+|.++++++..... -.+-.++|.+.
T Consensus 140 ~~Sd-Gs-~-----------~i~~iDp~T~~v~~~I~V~~~----------------------------g~~~~~lNELe 178 (262)
T 3nol_A 140 IMSD-GT-P-----------VLRFLDPESLTPVRTITVTAH----------------------------GEELPELNELE 178 (262)
T ss_dssp EECC-SS-S-----------EEEEECTTTCSEEEEEECEET----------------------------TEECCCEEEEE
T ss_pred EEEC-CC-C-----------eEEEEcCCCCeEEEEEEeccC----------------------------CccccccceeE
Confidence 9988 53 2 699999999999999999653 12334677666
Q ss_pred EeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 244 VDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 244 VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
.. ++.+|+..-....|.|.|.++|+--+..
T Consensus 179 ~~------~G~lyan~w~~~~I~vIDp~tG~V~~~I 208 (262)
T 3nol_A 179 WV------DGEIFANVWQTNKIVRIDPETGKVTGII 208 (262)
T ss_dssp EE------TTEEEEEETTSSEEEEECTTTCBEEEEE
T ss_pred EE------CCEEEEEEccCCeEEEEECCCCcEEEEE
Confidence 54 4689999988899999999999986655
No 50
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.34 E-value=0.086 Score=48.43 Aligned_cols=43 Identities=9% Similarity=0.100 Sum_probs=32.3
Q ss_pred EEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCC
Q psy13477 151 TTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPE 204 (295)
Q Consensus 151 sV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~ 204 (295)
-++++..+ .++||+=- |. .+.-+|.++|++|+++++++.+++.
T Consensus 44 ftqGL~~~-~~~Lyest-G~---------~g~S~v~~vD~~Tgkv~~~~~l~~~ 86 (262)
T 3nol_A 44 FTEGFFYR-NGYFYEST-GL---------NGRSSIRKVDIESGKTLQQIELGKR 86 (262)
T ss_dssp EEEEEEEE-TTEEEEEE-EE---------TTEEEEEEECTTTCCEEEEEECCTT
T ss_pred ccceEEEE-CCEEEEEC-CC---------CCCceEEEEECCCCcEEEEEecCCc
Confidence 45777777 68999832 21 1234799999999999999999875
No 51
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.30 E-value=0.79 Score=40.98 Aligned_cols=124 Identities=18% Similarity=0.137 Sum_probs=75.2
Q ss_pred CCceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcC-C
Q psy13477 84 NNLPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADS-C 160 (295)
Q Consensus 84 n~~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~-c 160 (295)
-.-|.|+++. ++++|++=.. ..++..+..++...++....-.+ .++..+.++.+|. .
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~-----~~~I~~~~~~g~~~~~~~~~~~~---------------~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVIS---------------RDIQAPDGLAVDWIH 88 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEEC---------------SSCSCCCEEEEETTT
T ss_pred CCceEEEEEEeCCCEEEEEECC-----CCcEEEEECCCCCCCcccEEEEe---------------CCCCCcCEEEEeecC
Confidence 3448999996 6899998632 23676676543100010000000 1345567889994 7
Q ss_pred CcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCce
Q psy13477 161 DRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIA 240 (295)
Q Consensus 161 ~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~ 240 (295)
++||+.|.+. -+|.++|+..... +.+ +... ....+
T Consensus 89 ~~ly~~d~~~------------~~I~~~~~~g~~~-~~~-~~~~-------------------------------~~~P~ 123 (316)
T 1ijq_A 89 SNIYWTDSVL------------GTVSVADTKGVKR-KTL-FREN-------------------------------GSKPR 123 (316)
T ss_dssp TEEEEEETTT------------TEEEEEETTSSSE-EEE-EECT-------------------------------TCCEE
T ss_pred CeEEEEECCC------------CEEEEEeCCCCce-EEE-EECC-------------------------------CCCcc
Confidence 8999999874 2588899875433 221 1221 12457
Q ss_pred eEEEeccCCCCCeEEEEEcCCC-CeEEEEEcCCCeEEE
Q psy13477 241 NIAVDVGKNCEDTFLYASDELA-YGLLSYSWEENTSWR 277 (295)
Q Consensus 241 di~VD~~~~c~~~~aYItD~~~-~gLIVydl~~~~swR 277 (295)
+|+||.. ++++|++|.+. +.|.++++.. +..+
T Consensus 124 ~iavdp~----~g~ly~~d~~~~~~I~~~~~dG-~~~~ 156 (316)
T 1ijq_A 124 AIVVDPV----HGFMYWTDWGTPAKIKKGGLNG-VDIY 156 (316)
T ss_dssp EEEEETT----TTEEEEEECSSSCEEEEEETTS-CCEE
T ss_pred eEEeCCC----CCEEEEEccCCCCeEEEEcCCC-CCeE
Confidence 8999953 57999999886 7899999854 3344
No 52
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.28 E-value=0.12 Score=45.49 Aligned_cols=40 Identities=8% Similarity=-0.013 Sum_probs=29.3
Q ss_pred EEEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcC
Q psy13477 150 TTTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFR 202 (295)
Q Consensus 150 vsV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p 202 (295)
....++.+|+.|+|||.|.+. .+|..||+.+ ++.+.+.++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~------------~~I~~~d~~g-~~~~~~~~~ 71 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEV------------GEIVSITPDG-NQQIHATVE 71 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTT------------TEEEEECTTC-CEEEEEECS
T ss_pred CCcceEEECCCCCEEEEeCCC------------CeEEEECCCC-ceEEEEeCC
Confidence 345678999999999999642 3689999876 455555554
No 53
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=95.15 E-value=0.76 Score=40.81 Aligned_cols=120 Identities=13% Similarity=0.079 Sum_probs=74.8
Q ss_pred ceeeeEEe-CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCCcEE
Q psy13477 86 LPVGIEVW-RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCDRLW 164 (295)
Q Consensus 86 ~p~gi~v~-~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~rLW 164 (295)
.+.++... +|+++++. .. .|..+..+. ..++.+..-. .......+..+.+|++|+||
T Consensus 91 ~v~~i~~~~dg~l~v~~---~~----gl~~~d~~~-----g~~~~~~~~~----------~~~~~~~~~~i~~d~~G~l~ 148 (326)
T 2ghs_A 91 MGSALAKISDSKQLIAS---DD----GLFLRDTAT-----GVLTLHAELE----------SDLPGNRSNDGRMHPSGALW 148 (326)
T ss_dssp CEEEEEEEETTEEEEEE---TT----EEEEEETTT-----CCEEEEECSS----------TTCTTEEEEEEEECTTSCEE
T ss_pred cceEEEEeCCCeEEEEE---CC----CEEEEECCC-----CcEEEEeeCC----------CCCCCCCCCCEEECCCCCEE
Confidence 36777775 89999986 22 366666432 1333332100 00124678889999999999
Q ss_pred EEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEE
Q psy13477 165 VLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAV 244 (295)
Q Consensus 165 VLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~V 244 (295)
+-+.+.-. .....+|..+| ++++. .+. .. . ...+.+++
T Consensus 149 v~~~~~~~------~~~~~~l~~~~--~g~~~-~~~--~~---------------------------~----~~~~~i~~ 186 (326)
T 2ghs_A 149 IGTMGRKA------ETGAGSIYHVA--KGKVT-KLF--AD---------------------------I----SIPNSICF 186 (326)
T ss_dssp EEEEETTC------CTTCEEEEEEE--TTEEE-EEE--EE---------------------------E----SSEEEEEE
T ss_pred EEeCCCcC------CCCceEEEEEe--CCcEE-Eee--CC---------------------------C----cccCCeEE
Confidence 98875421 12345788898 55543 221 11 0 13456777
Q ss_pred eccCCCCCeEEEEEcCCCCeEEEEEcC--CC
Q psy13477 245 DVGKNCEDTFLYASDELAYGLLSYSWE--EN 273 (295)
Q Consensus 245 D~~~~c~~~~aYItD~~~~gLIVydl~--~~ 273 (295)
+. ++.++|++|.....|.+||+. +|
T Consensus 187 s~----dg~~lyv~~~~~~~I~~~d~~~~~G 213 (326)
T 2ghs_A 187 SP----DGTTGYFVDTKVNRLMRVPLDARTG 213 (326)
T ss_dssp CT----TSCEEEEEETTTCEEEEEEBCTTTC
T ss_pred cC----CCCEEEEEECCCCEEEEEEcccccC
Confidence 73 356899999988899999986 55
No 54
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=95.14 E-value=0.06 Score=47.15 Aligned_cols=81 Identities=16% Similarity=0.026 Sum_probs=54.7
Q ss_pred EeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCc
Q psy13477 152 TYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPE 231 (295)
Q Consensus 152 V~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~ 231 (295)
+.++.+|++|+||+.+.|.- .|..||+. +++ +.+.-...
T Consensus 88 ~~gl~~d~dG~l~v~~~~~~------------~v~~~~~~-g~~-~~~~~~~~--------------------------- 126 (305)
T 3dr2_A 88 TNGNAVDAQQRLVHCEHGRR------------AITRSDAD-GQA-HLLVGRYA--------------------------- 126 (305)
T ss_dssp EEEEEECTTSCEEEEETTTT------------EEEEECTT-SCE-EEEECEET---------------------------
T ss_pred cceeeECCCCCEEEEECCCC------------EEEEECCC-CCE-EEEEeccC---------------------------
Confidence 56788999999999987642 48888886 653 33321111
Q ss_pred ccCCCCCceeEEEeccCCCCCeEEEEEcCC-----------------CCeEEEEEcCCCeEEEEe
Q psy13477 232 DILPGTFIANIAVDVGKNCEDTFLYASDEL-----------------AYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 232 ~~~~~S~l~di~VD~~~~c~~~~aYItD~~-----------------~~gLIVydl~~~~swRv~ 279 (295)
-.+....+++++|. ++.+|+||.. ..+|..||.++++.-++.
T Consensus 127 -~~~~~~~~~i~~d~-----dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 127 -GKRLNSPNDLIVAR-----DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp -TEECSCCCCEEECT-----TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred -CCccCCCCCEEECC-----CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 01223578899994 5679999851 357999999888766554
No 55
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.04 E-value=0.38 Score=45.43 Aligned_cols=167 Identities=13% Similarity=0.142 Sum_probs=90.0
Q ss_pred CCCC-CCceeeeEEe-CCcEEEEeccCCCCCC-------cEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccE
Q psy13477 80 FVPE-NNLPVGIEVW-RNKLFVTVPRWEDGVP-------STLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLT 150 (295)
Q Consensus 80 Yip~-n~~p~gi~v~-~gRiFvT~PR~~~gvP-------~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lv 150 (295)
+++. ..-|.+|++. +|++|++.--|.+|.+ -.+..+..++. .+..+.... -.. +.+ ..--
T Consensus 44 ~i~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~---~~~~~~l~~---~g~----~~~-~~~f 112 (355)
T 3sre_A 44 LVKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEK---EPAVSELEI---IGN----TLD-ISSF 112 (355)
T ss_dssp ECTTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSS---SCCEEECEE---ECS----SCC-GGGC
T ss_pred EeCCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCC---CCceEEEEc---cCC----CCC-cCce
Confidence 4444 2347888886 8999999866666643 24555554321 112221110 000 000 0122
Q ss_pred EEeEEEE--c--CCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhh----
Q psy13477 151 TTYRIKA--D--SCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRR---- 222 (295)
Q Consensus 151 sV~~i~i--D--~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~---- 222 (295)
..++|.+ | ...+|||+|.+.-+ ..-.|+-+|..++.+...-.+... +-.+.|+++++.+.+
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~--------s~ielf~~d~~~~~~~~~~~~~g~---~~~~pND~~v~~~G~fyvt 181 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSS--------STVEVFKFQEEEKSLLHLKTIRHK---LLPSVNDIVAVGPEHFYAT 181 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTC--------CEEEEEEEETTTTEEEEEEEECCT---TCSSEEEEEEEETTEEEEE
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCC--------CeEEEEEEECCCCEEEEEeccccC---CCCCCceEEEeCCCCEEec
Confidence 5666666 3 23479999998521 223577777776654444344433 346789999998643
Q ss_pred --h-------------------ccccCCCcccC---C-CCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCC
Q psy13477 223 --I-------------------RKYQFRPEDIL---P-GTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEE 272 (295)
Q Consensus 223 --~-------------------~~~~~~~~~~~---~-~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~ 272 (295)
+ +-|.+.|..++ . -.+-|.|+++. ++.++|++|+....|.+|++..
T Consensus 182 ~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~~l~~pNGia~sp----Dg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 182 NDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISP----DGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp ESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEEEEESSEEEEEECT----TSSEEEEEEGGGTEEEEEEECT
T ss_pred CCcEeCCcccccchhhccCCccEEEEEECCeEEEeecCCcccCcceECC----CCCEEEEEeCCCCeEEEEEECC
Confidence 1 11233221110 0 12334455543 4679999999999999999974
No 56
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.97 E-value=0.11 Score=44.66 Aligned_cols=79 Identities=8% Similarity=-0.125 Sum_probs=60.2
Q ss_pred cEEEeEEEEcCCCc-EEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhcccc
Q psy13477 149 LTTTYRIKADSCDR-LWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQ 227 (295)
Q Consensus 149 lvsV~~i~iD~c~r-LWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~ 227 (295)
+...-++..|+.|+ ||++|+.. -+|..||+.++ ++.+..+..
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~------------~~i~~~~~~~~--~~~~~~~~~----------------------- 69 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQ------------NRTWAWSDDGQ--LSPEMHPSH----------------------- 69 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGG------------TEEEEEETTSC--EEEEESSCS-----------------------
T ss_pred CccccCCeEeCCCCEEEEEeCCC------------CEEEEEECCCC--eEEEECCCC-----------------------
Confidence 44566888999987 89988643 26899999988 667765443
Q ss_pred CCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 228 FRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 228 ~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
....|++|. ++.+|+++.+..+|.+||.++|+.-++.
T Consensus 70 ----------~~~~l~~~~-----dg~l~v~~~~~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 70 ----------HQNGHCLNK-----QGHLIACSHGLRRLERQREPGGEWESIA 106 (296)
T ss_dssp ----------SEEEEEECT-----TCCEEEEETTTTEEEEECSTTCCEEEEE
T ss_pred ----------CcceeeECC-----CCcEEEEecCCCeEEEEcCCCCcEEEEe
Confidence 356788884 4568999999899999999999866553
No 57
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=94.91 E-value=0.57 Score=42.58 Aligned_cols=115 Identities=17% Similarity=0.112 Sum_probs=74.5
Q ss_pred ceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcC-CCc
Q psy13477 86 LPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADS-CDR 162 (295)
Q Consensus 86 ~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~-c~r 162 (295)
-|.|+++. .+++|++-.. ..++..+..++. ..+... + ..+....++.+|+ .|+
T Consensus 80 ~p~glavd~~~g~ly~~d~~-----~~~I~~~~~dG~-----~~~~l~----~----------~~~~~P~giavdp~~g~ 135 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSE-----TNRIEVSNLDGS-----LRKVLF----W----------QELDQPRAIALDPSSGF 135 (318)
T ss_dssp CCCEEEEETTTTEEEEEETT-----TTEEEEEETTSC-----SCEEEE----C----------SSCSSEEEEEEEGGGTE
T ss_pred CccEEEEEcCCCeEEEEECC-----CCEEEEEECCCC-----cEEEEE----e----------CCCCCccEEEEeCCCCE
Confidence 48899995 7899998632 236666665532 111110 0 1345567899996 689
Q ss_pred EEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeE
Q psy13477 163 LWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANI 242 (295)
Q Consensus 163 LWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di 242 (295)
||+-|.|. .++|..+|+..... +.+ +... -..-+.|
T Consensus 136 ly~td~~~-----------~~~I~r~~~dG~~~-~~~-~~~~-------------------------------l~~Pngl 171 (318)
T 3sov_A 136 MYWTDWGE-----------VPKIERAGMDGSSR-FII-INSE-------------------------------IYWPNGL 171 (318)
T ss_dssp EEEEECSS-----------SCEEEEEETTSCSC-EEE-ECSS-------------------------------CSCEEEE
T ss_pred EEEEecCC-----------CCEEEEEEcCCCCe-EEE-EECC-------------------------------CCCccEE
Confidence 99999873 25788888864321 111 1121 1245789
Q ss_pred EEeccCCCCCeEEEEEcCCCCeEEEEEcCC
Q psy13477 243 AVDVGKNCEDTFLYASDELAYGLLSYSWEE 272 (295)
Q Consensus 243 ~VD~~~~c~~~~aYItD~~~~gLIVydl~~ 272 (295)
++|.. ++.+|++|.....|-++|+..
T Consensus 172 avd~~----~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 172 TLDYE----EQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp EEETT----TTEEEEEETTTTEEEEEETTS
T ss_pred EEecc----CCEEEEEECCCCEEEEEcCCC
Confidence 99963 578999999988999999864
No 58
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.75 E-value=0.19 Score=42.95 Aligned_cols=72 Identities=7% Similarity=0.057 Sum_probs=53.8
Q ss_pred cCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCC
Q psy13477 158 DSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGT 237 (295)
Q Consensus 158 D~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S 237 (295)
...++++|...+. .+|.+||+.++++++++.++.. .
T Consensus 8 ~~~~~~~v~~~~~------------~~v~~~d~~~~~~~~~~~~~~~--------------------------------~ 43 (349)
T 1jmx_B 8 KAGHEYMIVTNYP------------NNLHVVDVASDTVYKSCVMPDK--------------------------------F 43 (349)
T ss_dssp CTTCEEEEEEETT------------TEEEEEETTTTEEEEEEECSSC--------------------------------C
T ss_pred cCCCEEEEEeCCC------------CeEEEEECCCCcEEEEEecCCC--------------------------------C
Confidence 3456777766542 3699999999999999988763 0
Q ss_pred CceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEE
Q psy13477 238 FIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWR 277 (295)
Q Consensus 238 ~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swR 277 (295)
....++++. ++.++|+++.....|.+||+++++.-+
T Consensus 44 ~~~~~~~s~----dg~~~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 44 GPGTAMMAP----DNRTAYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp SSCEEEECT----TSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCceeEECC----CCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence 134566663 356899999888899999999987654
No 59
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.72 E-value=0.11 Score=52.65 Aligned_cols=82 Identities=17% Similarity=0.138 Sum_probs=55.7
Q ss_pred cEEEeEEEEcC-CCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhcccc
Q psy13477 149 LTTTYRIKADS-CDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQ 227 (295)
Q Consensus 149 lvsV~~i~iD~-c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~ 227 (295)
|....+|.+|. .++||+.|++. .+|.++|+....+. .+ +...
T Consensus 539 l~~PnGlavd~~~~~LY~aD~~~------------~~I~~~d~dG~~~~-~~-~~~~----------------------- 581 (699)
T 1n7d_A 539 IQWPNGITLDLLSGRLYWVDSKL------------HSISSIDVNGGNRK-TI-LEDE----------------------- 581 (699)
T ss_dssp CSSCCCEEECTTTCCEEEEETTT------------TEEEEECSSSSCCE-EE-CCCS-----------------------
T ss_pred CCCccEEEEeccCCEEEEEecCC------------CeEEEEccCCCceE-EE-EecC-----------------------
Confidence 44566889995 58999999764 36888888653322 11 1111
Q ss_pred CCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 228 FRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 228 ~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
.....-..|+|| +.++|++|.....|.++|..+|+..++.
T Consensus 582 ------~~~~~P~glavd------~~~lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 582 ------KRLAHPFSLAVF------EDKVFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp ------SSCSSCCCCEEE------TTEEEEECSTTTCEEEEETTTEEEEECC
T ss_pred ------CcCCCceEeEEE------CCEEEEEeCCCCeEEEEEccCCCceEEe
Confidence 001223456787 3489999998999999999998877755
No 60
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.67 E-value=0.17 Score=47.45 Aligned_cols=80 Identities=8% Similarity=-0.034 Sum_probs=58.8
Q ss_pred ccEEEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhcccc
Q psy13477 148 TLTTTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQ 227 (295)
Q Consensus 148 ~lvsV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~ 227 (295)
.|.+...+.+|+.|+|||.|.+. .+|..||++++++...... ..
T Consensus 129 ~~~~P~~la~d~~g~lyv~d~~~------------~~I~~id~~~g~~~~~~~~-~~----------------------- 172 (409)
T 3hrp_A 129 KFKYMWGIAAVGNNTVLAYQRDD------------PRVRLISVDDNKVTTVHPG-FK----------------------- 172 (409)
T ss_dssp CCCCEEEEEECSTTEEEEEETTT------------TEEEEEETTTTEEEEEEET-CC-----------------------
T ss_pred ccCCceEEEEeCCCCEEEEecCC------------CcEEEEECCCCEEEEeecc-CC-----------------------
Confidence 58899999999999999999852 3699999999887654433 11
Q ss_pred CCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC-eEEEEEcCCCeEEEE
Q psy13477 228 FRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY-GLLSYSWEENTSWRA 278 (295)
Q Consensus 228 ~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~-gLIVydl~~~~swRv 278 (295)
.-. +++|. ++.++|++|.... .|.++|..++...+.
T Consensus 173 ----------~~~-ia~~~----~g~~l~~~d~~~~~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 173 ----------GGK-PAVTK----DKQRVYSIGWEGTHTVYVYMKASGWAPTR 209 (409)
T ss_dssp ----------BCB-CEECT----TSSEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred ----------CCc-eeEec----CCCcEEEEecCCCceEEEEEcCCCceeEE
Confidence 112 67774 3568888888654 888888887765443
No 61
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.57 E-value=0.21 Score=46.73 Aligned_cols=85 Identities=12% Similarity=0.144 Sum_probs=56.0
Q ss_pred cEEEeEEEEcCCCcEEEEeC-CCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhcccc
Q psy13477 149 LTTTYRIKADSCDRLWVLDS-GTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQ 227 (295)
Q Consensus 149 lvsV~~i~iD~c~rLWVLDt-G~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~ 227 (295)
|....++.+|++|+|||.|+ +. -+|..||+.++++....--+.. . .|.. +
T Consensus 322 ~~~P~gia~d~dG~lyvad~~~~------------~~I~~~~~~~G~v~~~~g~~~~---~-g~~~--------g----- 372 (409)
T 3hrp_A 322 FAQPNGMTVDEDGNFYIVDGFKG------------YCLRKLDILDGYVSTVAGQVDV---A-SQID--------G----- 372 (409)
T ss_dssp CSSEEEEEECTTCCEEEEETTTT------------CEEEEEETTTTEEEEEEECTTC---B-SCCC--------B-----
T ss_pred eCCCeEEEEeCCCCEEEEeCCCC------------CEEEEEECCCCEEEEEeCCCCC---C-CcCC--------C-----
Confidence 56788999999999999998 64 2588999888875433322111 0 0000 0
Q ss_pred CCCcccCC--CCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcC
Q psy13477 228 FRPEDILP--GTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWE 271 (295)
Q Consensus 228 ~~~~~~~~--~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~ 271 (295)
.... -..-..|+||. ++.+||+|.+...|-.++++
T Consensus 373 ----~~~~~~~~~P~giavd~-----~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 373 ----TPLEATFNYPYDICYDG-----EGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp ----STTTCCBSSEEEEEECS-----SSEEEEEESTTCEEEEEEEC
T ss_pred ----ChhceEeCCceEEEEcC-----CCCEEEEECCCCeEEEEEeC
Confidence 0001 12356799994 57999999999888888764
No 62
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.57 E-value=1.3 Score=44.23 Aligned_cols=117 Identities=15% Similarity=0.170 Sum_probs=78.0
Q ss_pred CceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcC-CC
Q psy13477 85 NLPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADS-CD 161 (295)
Q Consensus 85 ~~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~-c~ 161 (295)
.-|.||++. +|.||+|- | |-+..+..+..++. ..+..-+ +.|....++.+|. .+
T Consensus 435 ~~P~~iavdp~~G~ly~tD--~--g~~~~I~r~~~dG~-----~~~~l~~--------------~~l~~P~GlalD~~~~ 491 (619)
T 3s94_A 435 EEPRAIVLDPMVGYMYWTD--W--GEIPKIERAALDGS-----DRVVLVN--------------TSLGWPNGLALDYDEG 491 (619)
T ss_dssp CSEEEEEEETTTTEEEEEE--C--SSSCEEEEEETTSC-----SCEEEEC--------------SSCSCEEEEEEETTTT
T ss_pred CCeeeEEEEcCCCcEEEec--C--CCCCEEEEEccCCC-----ccEEEEe--------------CCCCCCeeeEEcccCC
Confidence 459999997 69999997 3 22456777776642 1111110 1366778899995 79
Q ss_pred cEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCcee
Q psy13477 162 RLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIAN 241 (295)
Q Consensus 162 rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~d 241 (295)
+|++.|++.- +|..+|+..... +++ +... . ...-.
T Consensus 492 ~LY~aD~~~~------------~I~~~~~dG~~~-~~~-~~~~---------------------------l----~~P~g 526 (619)
T 3s94_A 492 KIYWGDAKTD------------KIEVMNTDGTGR-RVL-VEDK---------------------------I----PHIFG 526 (619)
T ss_dssp EEEEEETTTT------------EEEEEESSSCCC-EEE-EECC---------------------------C----CSSCC
T ss_pred EEEEEECCCC------------EEEEEecCCCce-EEE-eccC---------------------------C----CCcEE
Confidence 9999998752 577888854332 222 1121 1 12346
Q ss_pred EEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeE
Q psy13477 242 IAVDVGKNCEDTFLYASDELAYGLLSYSWEENTS 275 (295)
Q Consensus 242 i~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~s 275 (295)
|+|+ +.++|+||.....|...|..+|..
T Consensus 527 lav~------~~~ly~tD~~~~~I~~~~k~~g~~ 554 (619)
T 3s94_A 527 FTLL------GDYVYWTDWQRRSIERVHKRSAER 554 (619)
T ss_dssp EEEE------TTEEEEECTTSSCEEEEESSSCCE
T ss_pred EEEE------CCEEEEeecCCCeEEEEEcCCCce
Confidence 7887 359999999999999999999943
No 63
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=94.50 E-value=0.43 Score=41.55 Aligned_cols=82 Identities=13% Similarity=0.206 Sum_probs=56.8
Q ss_pred EEEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECC-CCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccC
Q psy13477 150 TTTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLK-TDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQF 228 (295)
Q Consensus 150 vsV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~-td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~ 228 (295)
..+..+.++++|+|++.|.|. .+|.+||+. ++++...-.+...
T Consensus 141 ~~~~~~~~spdg~l~v~~~~~------------~~v~~~~~~~~g~~~~~~~~~~~------------------------ 184 (347)
T 3hfq_A 141 SHIHYTDLTPDNRLAVIDLGS------------DKVYVYNVSDAGQLSEQSVLTME------------------------ 184 (347)
T ss_dssp CCEEEEEECTTSCEEEEETTT------------TEEEEEEECTTSCEEEEEEEECC------------------------
T ss_pred CCceEEEECCCCcEEEEeCCC------------CEEEEEEECCCCcEEEeeeEEcC------------------------
Confidence 456778899999999988764 268899998 5655433322221
Q ss_pred CCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCC--CeEEE
Q psy13477 229 RPEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEE--NTSWR 277 (295)
Q Consensus 229 ~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~--~~swR 277 (295)
.++....++++. ++.++|+++.....+.||++.. ++...
T Consensus 185 ------~g~~p~~~~~sp----dg~~l~v~~~~~~~v~v~~~~~~~g~~~~ 225 (347)
T 3hfq_A 185 ------AGFGPRHLVFSP----DGQYAFLAGELSSQIASLKYDTQTGAFTQ 225 (347)
T ss_dssp ------TTCCEEEEEECT----TSSEEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred ------CCCCCceEEECC----CCCEEEEEeCCCCEEEEEEecCCCCceEE
Confidence 223456678774 3678999999999999999884 65433
No 64
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=94.48 E-value=0.14 Score=49.00 Aligned_cols=81 Identities=25% Similarity=0.298 Sum_probs=59.2
Q ss_pred CCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCC
Q psy13477 159 SCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTF 238 (295)
Q Consensus 159 ~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~ 238 (295)
..+||+|+....-+ +. ....+..|.++|++|.++++++.++..
T Consensus 290 ~~~~lyV~~~~~~~--~~-hk~~~~~V~viD~~t~kv~~~i~vg~~---------------------------------- 332 (386)
T 3sjl_D 290 ALDRIYLLVDQRDE--WR-HKTASRFVVVLDAKTGERLAKFEMGHE---------------------------------- 332 (386)
T ss_dssp TTTEEEEEEEECCT--TC-TTSCEEEEEEEETTTCCEEEEEEEEEE----------------------------------
T ss_pred CCCeEEEEeccccc--cc-cCCCCCEEEEEECCCCeEEEEEECCCC----------------------------------
Confidence 46899998541111 11 112235899999999999999999874
Q ss_pred ceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 239 IANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 239 l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
...|+|+.. +...+|+++.+...+.|||.++++--+-.
T Consensus 333 ~~~lavs~D---~~~~ly~tn~~~~~VsViD~~t~k~~~~i 370 (386)
T 3sjl_D 333 IDSINVSQD---EKPLLYALSTGDKTLYIHDAESGEELRSV 370 (386)
T ss_dssp ECEEEECSS---SSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred cceEEECCC---CCeEEEEEcCCCCeEEEEECCCCcEEEEe
Confidence 456788742 13589999998999999999999876643
No 65
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.36 E-value=0.82 Score=46.29 Aligned_cols=149 Identities=17% Similarity=0.121 Sum_probs=77.9
Q ss_pred CCCceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEc-C
Q psy13477 83 ENNLPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKAD-S 159 (295)
Q Consensus 83 ~n~~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD-~ 159 (295)
...-|.|+++. +++||++=.. ..+|..+..++...++....- -..++..+.+|.+| .
T Consensus 404 ~~~~p~gla~d~~~~~Ly~sD~~-----~~~I~~~~~~g~~~~~~~~~~---------------i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 404 NLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTV---------------ISRDIQAPDGLAVDWI 463 (699)
T ss_dssp CCTTCCCCEEETTTTEEEECCTT-----TTSBEEEESCCCCC-CCCCCB---------------CCSCC--CCCEECCCS
T ss_pred cCcceEEEccccccCeEEEEecC-----CCeEEEEecCCCCCCcceEEE---------------EeCCCCCcceEEEEee
Confidence 33458899986 7899987422 224556665431000000000 01235566778888 5
Q ss_pred CCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhh------------hhcccc
Q psy13477 160 CDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDR------------RIRKYQ 227 (295)
Q Consensus 160 c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~------------~~~~~~ 227 (295)
.++|++.|.+.- +|.++|+....+... +.... ..-+.||+|... .|.++.
T Consensus 464 ~g~LY~tD~~~~------------~I~v~d~dg~~~~~l--~~~~~----~~P~giavDp~~g~ly~td~~~~~~I~~~~ 525 (699)
T 1n7d_A 464 HSNIYWTDSVLG------------TVSVADTKGVKRKTL--FREQG----SKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 525 (699)
T ss_dssp SSBCEECCTTTS------------CEEEEBSSSCCEEEE--CCCSS----CCCCCEECCSSSSCCEECCCSSSCCEEBCC
T ss_pred CCcEEEEeccCC------------eEEEEecCCCceEEE--EeCCC----CCcceEEEccCCCcEEEcccCCCCeEEEEe
Confidence 678888887641 366677665433221 11110 011235554321 122211
Q ss_pred CC----CcccC-CCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCC
Q psy13477 228 FR----PEDIL-PGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEEN 273 (295)
Q Consensus 228 ~~----~~~~~-~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~ 273 (295)
.- ..++. .-..-+.|+||.. ++.+|++|.....|.++|+...
T Consensus 526 ~dG~~~~~l~~~~l~~PnGlavd~~----~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 526 LNGVDIYSLVTENIQWPNGITLDLL----SGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp SSSCCCCEESCSSCSSCCCEEECTT----TCCEEEEETTTTEEEEECSSSS
T ss_pred CCCCCeeEEEeCCCCCccEEEEecc----CCEEEEEecCCCeEEEEccCCC
Confidence 10 01111 1234567999863 5789999999999999999754
No 66
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.24 E-value=0.96 Score=45.39 Aligned_cols=120 Identities=12% Similarity=0.132 Sum_probs=82.0
Q ss_pred CceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcC-CC
Q psy13477 85 NLPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADS-CD 161 (295)
Q Consensus 85 ~~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~-c~ 161 (295)
.-|.||++. +|.||+|- | |-...+..+..++. ..+.. -+++....++.+|. .+
T Consensus 123 ~~P~~iavdp~~G~lY~tD--~--g~~~~I~r~~~dG~-----~~~~l---------------~~~~~~P~GlalD~~~~ 178 (628)
T 4a0p_A 123 DSPRALALDPAEGFMYWTE--W--GGKPKIDRAAMDGS-----ERTTL---------------VPNVGRANGLTIDYAKR 178 (628)
T ss_dssp CCEEEEEEETTTTEEEEEE--C--SSSCEEEEEETTSC-----SCEEE---------------ECSCSSEEEEEEETTTT
T ss_pred CCcccEEEccCCCeEEEeC--C--CCCCEEEEEeCCCC-----ceEEE---------------ECCCCCcceEEEccccC
Confidence 348999997 79999996 4 22457777776642 11110 01355678899998 58
Q ss_pred cEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCcee
Q psy13477 162 RLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIAN 241 (295)
Q Consensus 162 rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~d 241 (295)
+|++.|++. .+|..+|+..... +. +... ....-.
T Consensus 179 ~LY~aD~~~------------~~I~~~d~dG~~~-~v--~~~~-------------------------------l~~P~g 212 (628)
T 4a0p_A 179 RLYWTDLDT------------NLIESSNMLGLNR-EV--IADD-------------------------------LPHPFG 212 (628)
T ss_dssp EEEEEETTT------------TEEEEEETTSCSC-EE--EEEC-------------------------------CSCEEE
T ss_pred EEEEEECCC------------CEEEEEcCCCCce-EE--eecc-------------------------------CCCceE
Confidence 999999864 2588889876443 21 1111 123447
Q ss_pred EEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEec
Q psy13477 242 IAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRASH 280 (295)
Q Consensus 242 i~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~h 280 (295)
|+|| +.++|+||.....|.++|..+|+...+.+
T Consensus 213 lav~------~~~ly~tD~~~~~I~~~dk~tg~~~~~l~ 245 (628)
T 4a0p_A 213 LTQY------QDYIYWTDWSRRSIERANKTSGQNRTIIQ 245 (628)
T ss_dssp EEEE------TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEE------CCEEEEecCCCCEEEEEECCCCCceEEEe
Confidence 8888 36899999999999999998887666553
No 67
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=94.17 E-value=0.44 Score=41.44 Aligned_cols=49 Identities=12% Similarity=0.183 Sum_probs=37.0
Q ss_pred CceeEEEeccCCCCCeEEEEEcCCCCeEEEE--EcCCCeEEEEecCCcccCCCCC
Q psy13477 238 FIANIAVDVGKNCEDTFLYASDELAYGLLSY--SWEENTSWRASHGFFFPDPLLV 290 (295)
Q Consensus 238 ~l~di~VD~~~~c~~~~aYItD~~~~gLIVy--dl~~~~swRv~h~~f~pdp~~~ 290 (295)
....++++. ++.++|+++.....+.|| |.++|+.-++.+..-.|.|...
T Consensus 287 ~~~~~~~sp----dg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~~~~~~p~p~~~ 337 (347)
T 3hfq_A 287 FPRDFDLDP----TEAFVVVVNQNTDNATLYARDLTSGKLSLLQKDVTVPEGVCV 337 (347)
T ss_dssp CCCEEEECT----TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEECTTEEEE
T ss_pred CcCeEEECC----CCCEEEEEEcCCCcEEEEEEeCCCCeEEecccceecCCCcEE
Confidence 456778874 357999999988899999 7778988888776666766543
No 68
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=94.01 E-value=0.23 Score=47.02 Aligned_cols=74 Identities=8% Similarity=0.105 Sum_probs=54.6
Q ss_pred EEeEEEEcC-CCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCC
Q psy13477 151 TTYRIKADS-CDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFR 229 (295)
Q Consensus 151 sV~~i~iD~-c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~ 229 (295)
...++.+|+ .|+|||.|.|. -+|..||+.+.++.....++.
T Consensus 227 ~p~giavdp~~g~lyv~d~~~------------~~V~~~~~~~~~~~~~~~~~~-------------------------- 268 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNA------------GQVFRYDFTTQETTPLFTIQD-------------------------- 268 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTT------------TEEEEEETTTTEEEEEEECSS--------------------------
T ss_pred CceEEEEeCCCCEEEEEECCC------------CEEEEEECCCCcEEEEEEcCC--------------------------
Confidence 345677898 89999999864 269999998776543333332
Q ss_pred CcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCC
Q psy13477 230 PEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEE 272 (295)
Q Consensus 230 ~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~ 272 (295)
...-+.|++|. ++.++|++|.....|.++|...
T Consensus 269 ------~~~P~gia~~p----dG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 269 ------SGWEFHIQFHP----SGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp ------SSCCEEEEECT----TSSEEEEEETTTTEEEEEEEET
T ss_pred ------CCcceeEEEcC----CCCEEEEEECCCCEEEEEeCCc
Confidence 13467899995 3568999999999999987663
No 69
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=93.99 E-value=0.19 Score=48.55 Aligned_cols=129 Identities=14% Similarity=-0.028 Sum_probs=74.4
Q ss_pred eCCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCC-cEEEEeCCCC
Q psy13477 93 WRNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCD-RLWVLDSGTV 171 (295)
Q Consensus 93 ~~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~-rLWVLDtG~~ 171 (295)
+..++||+-..+.... .+|..|+.... -.+.-.|- +. .. ++.++++| +|||-+++.-
T Consensus 83 ~~~~vyV~n~~~~~~~-~~VsVID~~t~----~vv~~I~v---------------G~-~P-gia~SpDgk~lyVan~~~~ 140 (426)
T 3c75_H 83 DARRVYIQDPAHFAAI-TQQFVIDGSTG----RILGMTDG---------------GF-LP-HPVAAEDGSFFAQASTVFE 140 (426)
T ss_dssp CTTEEEEEECTTTCSS-EEEEEEETTTT----EEEEEEEE---------------CS-SC-EEEECTTSSCEEEEEEEEE
T ss_pred CCCEEEEECCCcCCCC-CeEEEEECCCC----EEEEEEEC---------------CC-CC-ceEECCCCCEEEEEecccc
Confidence 3678999997653222 68888876421 11211111 01 12 67777776 4999986421
Q ss_pred CCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCC
Q psy13477 172 GIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCE 251 (295)
Q Consensus 172 ~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~ 251 (295)
... .-.....|.+||+.|.++++++.++..- -...+..-..++++. +
T Consensus 141 ~~~---~G~~~~~VsviD~~t~~vv~~I~v~g~~--------------------------r~~~g~~P~~~~~sp----D 187 (426)
T 3c75_H 141 RIA---RGKRTDYVEVFDPVTFLPIADIELPDAP--------------------------RFLVGTYQWMNALTP----D 187 (426)
T ss_dssp ETT---EEEEEEEEEEECTTTCCEEEEEEETTCC--------------------------CCCBSCCGGGSEECT----T
T ss_pred ccc---cCCCCCEEEEEECCCCcEEEEEECCCcc--------------------------ccccCCCcceEEEcC----C
Confidence 100 0012347999999999999999997210 000112344566663 3
Q ss_pred CeEEEEEcCC-CCeEEEEEcCCCeEE
Q psy13477 252 DTFLYASDEL-AYGLLSYSWEENTSW 276 (295)
Q Consensus 252 ~~~aYItD~~-~~gLIVydl~~~~sw 276 (295)
+.++|+++.. ...|.|+|+++++--
T Consensus 188 Gk~lyV~n~~~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 188 NKNLLFYQFSPAPAVGVVDLEGKTFD 213 (426)
T ss_dssp SSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred CCEEEEEecCCCCeEEEEECCCCeEE
Confidence 5677777654 456777777776653
No 70
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=93.95 E-value=0.67 Score=42.89 Aligned_cols=82 Identities=12% Similarity=0.067 Sum_probs=56.5
Q ss_pred EEcCC-CcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccC
Q psy13477 156 KADSC-DRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDIL 234 (295)
Q Consensus 156 ~iD~c-~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~ 234 (295)
.++++ +||||......+. ......-.|.++|++|+++++++.++..
T Consensus 273 ~~s~d~~~lyV~~~~~~~~---~~~~~~~~V~VID~~t~~vv~~i~~g~~------------------------------ 319 (373)
T 2mad_H 273 AYLKSSDGIYLLTSEQSAW---KLHAAAKEVTSVTGLVGQTSSQISLGHD------------------------------ 319 (373)
T ss_pred EECCCCCEEEEEeccCCcc---cccCCCCeEEEEECCCCEEEEEEECCCC------------------------------
Confidence 34443 6788864322110 0111234799999999999999987663
Q ss_pred CCCCceeEEEeccCCCCCe-EEEEEcCCCCeEEEEEcCCCeEEEE
Q psy13477 235 PGTFIANIAVDVGKNCEDT-FLYASDELAYGLLSYSWEENTSWRA 278 (295)
Q Consensus 235 ~~S~l~di~VD~~~~c~~~-~aYItD~~~~gLIVydl~~~~swRv 278 (295)
-..|+++. ++. .+|++..+...|.|||.++++--+.
T Consensus 320 ----p~~i~~s~----Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 320 ----VDAISVAQ----DGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred ----cCeEEECC----CCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 34566664 234 8999998888999999999987654
No 71
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=93.90 E-value=1.3 Score=44.43 Aligned_cols=121 Identities=14% Similarity=0.111 Sum_probs=80.6
Q ss_pred CceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcC-CC
Q psy13477 85 NLPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADS-CD 161 (295)
Q Consensus 85 ~~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~-c~ 161 (295)
.-|.|+++. .++||++-.. --++..+..++. .. -.|. . ..+....+|.+|+ .|
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~-----~~~I~v~~~dG~-~~-~~l~---~--------------~~l~~P~~iavdp~~G 135 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTG-----TNRIEVSKLDGQ-HR-QVLV---W--------------KDLDSPRALALDPAEG 135 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETT-----TTEEEEEETTST-TC-EEEE---C--------------SSCCCEEEEEEETTTT
T ss_pred CCcceEEEEeCCCEEEEEECC-----CCEEEEEecCCC-cE-EEEE---e--------------CCCCCcccEEEccCCC
Confidence 358999995 7899998532 246777776542 10 0111 0 1355678999996 79
Q ss_pred cEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCcee
Q psy13477 162 RLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIAN 241 (295)
Q Consensus 162 rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~d 241 (295)
.||+-|.|. .++|..+++....+. .+ +. . ...-+.
T Consensus 136 ~lY~tD~g~-----------~~~I~r~~~dG~~~~-~l-~~-~-------------------------------~~~P~G 170 (628)
T 4a0p_A 136 FMYWTEWGG-----------KPKIDRAAMDGSERT-TL-VP-N-------------------------------VGRANG 170 (628)
T ss_dssp EEEEEECSS-----------SCEEEEEETTSCSCE-EE-EC-S-------------------------------CSSEEE
T ss_pred eEEEeCCCC-----------CCEEEEEeCCCCceE-EE-EC-C-------------------------------CCCcce
Confidence 999999874 358888888654422 11 11 1 134678
Q ss_pred EEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 242 IAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 242 i~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
|++|.. +..+|++|.....|-++|+..+.. ++.
T Consensus 171 lalD~~----~~~LY~aD~~~~~I~~~d~dG~~~-~v~ 203 (628)
T 4a0p_A 171 LTIDYA----KRRLYWTDLDTNLIESSNMLGLNR-EVI 203 (628)
T ss_dssp EEEETT----TTEEEEEETTTTEEEEEETTSCSC-EEE
T ss_pred EEEccc----cCEEEEEECCCCEEEEEcCCCCce-EEe
Confidence 999963 578999999999999999866433 444
No 72
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=93.89 E-value=1.4 Score=43.95 Aligned_cols=118 Identities=18% Similarity=0.155 Sum_probs=78.4
Q ss_pred CceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCC-C
Q psy13477 85 NLPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSC-D 161 (295)
Q Consensus 85 ~~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c-~ 161 (295)
.-|.|+++. .++||+|=.. ..++..+..++. .. ..|. ..+|....+|.+|+. |
T Consensus 392 ~~p~GlAvD~~~~~lY~tD~~-----~~~I~v~~~~G~-~~-~~l~-----------------~~~l~~P~~iavdp~~G 447 (619)
T 3s94_A 392 AHPDGIAVDWVARNLYWTDTG-----TDRIEVTRLNGT-MR-KILI-----------------SEDLEEPRAIVLDPMVG 447 (619)
T ss_dssp SCCCEEEEETTTTEEEEEETT-----TTEEEEEETTSC-SC-EEEE-----------------CTTCCSEEEEEEETTTT
T ss_pred CCcCceEEecccCcEEEEeCC-----CCcEEEEeCCCC-eE-EEEE-----------------ECCCCCeeeEEEEcCCC
Confidence 358899995 7889999532 346766766542 10 0111 024677889999985 9
Q ss_pred cEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCcee
Q psy13477 162 RLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIAN 241 (295)
Q Consensus 162 rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~d 241 (295)
.||+-|.|. .|+|..+++.-... +.+ + .+ .-..-+.
T Consensus 448 ~ly~tD~g~-----------~~~I~r~~~dG~~~-~~l-~-~~------------------------------~l~~P~G 483 (619)
T 3s94_A 448 YMYWTDWGE-----------IPKIERAALDGSDR-VVL-V-NT------------------------------SLGWPNG 483 (619)
T ss_dssp EEEEEECSS-----------SCEEEEEETTSCSC-EEE-E-CS------------------------------SCSCEEE
T ss_pred cEEEecCCC-----------CCEEEEEccCCCcc-EEE-E-eC------------------------------CCCCCee
Confidence 999999986 36788888753221 111 1 21 1124678
Q ss_pred EEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCe
Q psy13477 242 IAVDVGKNCEDTFLYASDELAYGLLSYSWEENT 274 (295)
Q Consensus 242 i~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~ 274 (295)
|+||.. +..+|++|.....|-.+++....
T Consensus 484 lalD~~----~~~LY~aD~~~~~I~~~~~dG~~ 512 (619)
T 3s94_A 484 LALDYD----EGKIYWGDAKTDKIEVMNTDGTG 512 (619)
T ss_dssp EEEETT----TTEEEEEETTTTEEEEEESSSCC
T ss_pred eEEccc----CCEEEEEECCCCEEEEEecCCCc
Confidence 999963 57899999999999999986544
No 73
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=93.81 E-value=0.37 Score=41.31 Aligned_cols=67 Identities=10% Similarity=0.154 Sum_probs=52.7
Q ss_pred CCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCC
Q psy13477 159 SCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTF 238 (295)
Q Consensus 159 ~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~ 238 (295)
..+++||.+.+. -.|.+||+.++++++++.++.. .
T Consensus 8 ~~~~~~v~~~~~------------~~v~~~d~~~~~~~~~~~~~~~---------------------------------~ 42 (331)
T 3u4y_A 8 TSNFGIVVEQHL------------RRISFFSTDTLEILNQITLGYD---------------------------------F 42 (331)
T ss_dssp CCCEEEEEEGGG------------TEEEEEETTTCCEEEEEECCCC---------------------------------E
T ss_pred CCCEEEEEecCC------------CeEEEEeCcccceeeeEEccCC---------------------------------c
Confidence 357888887643 2699999999999999887643 1
Q ss_pred ceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeE
Q psy13477 239 IANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTS 275 (295)
Q Consensus 239 l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~s 275 (295)
. .++++. ++.++|+++.+...|.+||+++++.
T Consensus 43 ~-~~~~s~----dg~~l~~~~~~~~~i~~~d~~~~~~ 74 (331)
T 3u4y_A 43 V-DTAITS----DCSNVVVTSDFCQTLVQIETQLEPP 74 (331)
T ss_dssp E-EEEECS----SSCEEEEEESTTCEEEEEECSSSSC
T ss_pred c-eEEEcC----CCCEEEEEeCCCCeEEEEECCCCce
Confidence 2 567764 3568999999989999999999985
No 74
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=93.64 E-value=1.5 Score=36.93 Aligned_cols=58 Identities=14% Similarity=0.208 Sum_probs=42.9
Q ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELA 262 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~ 262 (295)
-.|.+||++++++++++..+.. ...++++. ++.++|++ ...
T Consensus 260 ~~v~~~d~~~~~~~~~~~~~~~----------------------------------~~~~~~s~----dg~~l~~~-~~~ 300 (337)
T 1pby_B 260 NVLESFDLEKNASIKRVPLPHS----------------------------------YYSVNVST----DGSTVWLG-GAL 300 (337)
T ss_dssp SEEEEEETTTTEEEEEEECSSC----------------------------------CCEEEECT----TSCEEEEE-SBS
T ss_pred CeEEEEECCCCcCcceecCCCc----------------------------------eeeEEECC----CCCEEEEE-cCC
Confidence 3699999999999988876543 34566663 35689998 446
Q ss_pred CeEEEEEcCCCeEEEEe
Q psy13477 263 YGLLSYSWEENTSWRAS 279 (295)
Q Consensus 263 ~gLIVydl~~~~swRv~ 279 (295)
..|.|||+++++.-+..
T Consensus 301 ~~i~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 301 GDLAAYDAETLEKKGQV 317 (337)
T ss_dssp SEEEEEETTTCCEEEEE
T ss_pred CcEEEEECcCCcEEEEE
Confidence 78999999998755433
No 75
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=93.30 E-value=0.71 Score=41.66 Aligned_cols=75 Identities=19% Similarity=0.163 Sum_probs=57.9
Q ss_pred EEeEEEEcC-CCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCC
Q psy13477 151 TTYRIKADS-CDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFR 229 (295)
Q Consensus 151 sV~~i~iD~-c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~ 229 (295)
.+-++..|+ .++||++... +++|+.+|+. +++++++.+...
T Consensus 28 ~lSGla~~~~~~~L~aV~d~------------~~~I~~ld~~-g~v~~~i~l~g~------------------------- 69 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINK------------PAAIVEMTTN-GDLIRTIPLDFV------------------------- 69 (255)
T ss_dssp CEEEEEEETTTTEEEEEEET------------TEEEEEEETT-CCEEEEEECSSC-------------------------
T ss_pred CcceeEEeCCCCEEEEEECC------------CCeEEEEeCC-CCEEEEEecCCC-------------------------
Confidence 467778876 5789997554 3679999998 999999988652
Q ss_pred CcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeE
Q psy13477 230 PEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTS 275 (295)
Q Consensus 230 ~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~s 275 (295)
.=...|+++ .++..||+|.+...|++|++.....
T Consensus 70 -------~D~EGIa~~-----~~g~~~vs~E~~~~l~~~~v~~~~~ 103 (255)
T 3qqz_A 70 -------KDLETIEYI-----GDNQFVISDERDYAIYVISLTPNSE 103 (255)
T ss_dssp -------SSEEEEEEC-----STTEEEEEETTTTEEEEEEECTTCC
T ss_pred -------CChHHeEEe-----CCCEEEEEECCCCcEEEEEcCCCCe
Confidence 126677887 2456789999999999999877664
No 76
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=93.26 E-value=0.89 Score=40.59 Aligned_cols=85 Identities=16% Similarity=0.140 Sum_probs=57.0
Q ss_pred EEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCC
Q psy13477 151 TTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRP 230 (295)
Q Consensus 151 sV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~ 230 (295)
.+.+|.++++||++|-+...-+ + . .+|..+| ++++. .||... .+
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~--~----~--~~l~~~~--~g~~~---~~p~~~-----------~~------------ 61 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQ--P----E--MQVAELT--QDGLI---PFPPQS-----------GN------------ 61 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGC--C----S--CSEEEEE--TTEEE---ESCCCC-----------SS------------
T ss_pred CcceEEECCCCCEEEEeCCCCC--C----c--eEEEEEC--CCCee---cCCCcc-----------cC------------
Confidence 5678899999999998653321 0 1 5788888 56542 566430 00
Q ss_pred cccCCCCCceeEEEeccCCCCCeEEEEEcCC-----CCeEEEEEcCCCeEEE
Q psy13477 231 EDILPGTFIANIAVDVGKNCEDTFLYASDEL-----AYGLLSYSWEENTSWR 277 (295)
Q Consensus 231 ~~~~~~S~l~di~VD~~~~c~~~~aYItD~~-----~~gLIVydl~~~~swR 277 (295)
....-.....|++|. ++.+|++|.+ ...|++||+++|+--+
T Consensus 62 -~~~~~~~p~gv~~d~-----~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~ 107 (343)
T 2qe8_A 62 -AIITFDTVLGIKSDG-----NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSR 107 (343)
T ss_dssp -CCCCCSCEEEEEECS-----SSEEEEEECHHHHTSCCEEEEEETTTTEEEE
T ss_pred -cccceeEeeEEEEcC-----CCcEEEEcCCCCcCCCCeEEEEECCCCeEEE
Confidence 001123467889983 4679999987 6899999999998433
No 77
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=93.24 E-value=0.91 Score=40.41 Aligned_cols=80 Identities=20% Similarity=0.251 Sum_probs=60.3
Q ss_pred EEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCC
Q psy13477 151 TTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRP 230 (295)
Q Consensus 151 sV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~ 230 (295)
.|..+..+.++++|+...+. ..|.+||+++++.++++.....
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d------------~~v~~~d~~~~~~~~~~~~~~~-------------------------- 212 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQA------------NAVHVFDLKTLAYKATVDLTGK-------------------------- 212 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGG------------TEEEEEETTTCCEEEEEECSSS--------------------------
T ss_pred ceeEEEEcCCCEEEEEECCC------------CEEEEEECCCceEEEEEcCCCC--------------------------
Confidence 56667778888998876532 3689999999999888773332
Q ss_pred cccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 231 EDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 231 ~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
....++++. ++.++|+++..+..|.+||+++++.-+..
T Consensus 213 -------~~~~~~~~~----~~~~l~~~~~~~~~i~~~d~~~~~~~~~~ 250 (433)
T 3bws_A 213 -------WSKILLYDP----IRDLVYCSNWISEDISVIDRKTKLEIRKT 250 (433)
T ss_dssp -------SEEEEEEET----TTTEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred -------CeeEEEEcC----CCCEEEEEecCCCcEEEEECCCCcEEEEe
Confidence 356677774 36789999988889999999998765543
No 78
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=93.11 E-value=0.26 Score=47.59 Aligned_cols=83 Identities=22% Similarity=0.255 Sum_probs=58.4
Q ss_pred EEEcCC-CcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCccc
Q psy13477 155 IKADSC-DRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDI 233 (295)
Q Consensus 155 i~iD~c-~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~ 233 (295)
+.++++ +||||.+..... +.. ......|.++|++|.++++++.++..
T Consensus 324 va~s~dg~rlyVa~~~~~~--gth-k~~s~~VsVID~~T~kvv~~I~vg~~----------------------------- 371 (426)
T 3c75_H 324 TAYHRQSDRIYLLVDQRDE--WKH-KAASRFVVVLNAETGERINKIELGHE----------------------------- 371 (426)
T ss_dssp EEEEGGGTEEEEEEEECCT--TCT-TSCEEEEEEEETTTCCEEEEEEEEEE-----------------------------
T ss_pred eEEcCCCCEEEEEeccccc--ccc-cCCCCEEEEEECCCCeEEEEEECCCC-----------------------------
Confidence 344444 678888642211 110 11245799999999999999988763
Q ss_pred CCCCCceeEEEeccCCCCCe-EEEEEcCCCCeEEEEEcCCCeEEEE
Q psy13477 234 LPGTFIANIAVDVGKNCEDT-FLYASDELAYGLLSYSWEENTSWRA 278 (295)
Q Consensus 234 ~~~S~l~di~VD~~~~c~~~-~aYItD~~~~gLIVydl~~~~swRv 278 (295)
-..|+++. ++. .+|++......|.|||.++++--+-
T Consensus 372 -----P~gia~sp----Dg~~~lyv~n~~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 372 -----IDSINVSQ----DAEPLLYALSAGTQTLHIYDAATGEELRS 408 (426)
T ss_dssp -----ECEEEECC----SSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred -----cCeEEEcc----CCCEEEEEEcCCCCeEEEEECCCCCEEEE
Confidence 34566664 245 9999999999999999999987653
No 79
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=93.01 E-value=0.28 Score=41.88 Aligned_cols=122 Identities=13% Similarity=0.083 Sum_probs=74.1
Q ss_pred eeeeEEe-CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCCc-EE
Q psy13477 87 PVGIEVW-RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCDR-LW 164 (295)
Q Consensus 87 p~gi~v~-~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~r-LW 164 (295)
.+|++.. ++++|++-.. ..+|..++.... ..++-++. .. ...+..+.++++|+ ||
T Consensus 2 ~~g~~~~~~~~~~v~~~~-----~~~v~~~d~~~~----~~~~~~~~---~~-----------~~~~~~~~~s~dg~~~~ 58 (349)
T 1jmx_B 2 DTGPALKAGHEYMIVTNY-----PNNLHVVDVASD----TVYKSCVM---PD-----------KFGPGTAMMAPDNRTAY 58 (349)
T ss_dssp --CCCCCTTCEEEEEEET-----TTEEEEEETTTT----EEEEEEEC---SS-----------CCSSCEEEECTTSSEEE
T ss_pred CccccccCCCEEEEEeCC-----CCeEEEEECCCC----cEEEEEec---CC-----------CCCCceeEECCCCCEEE
Confidence 3577765 7888888743 347777765321 11211111 00 00134567778876 88
Q ss_pred EEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEE
Q psy13477 165 VLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAV 244 (295)
Q Consensus 165 VLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~V 244 (295)
+...+. .+|.+||++++++++++.++.. --..+.....+++
T Consensus 59 v~~~~~------------~~i~~~d~~t~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~ 99 (349)
T 1jmx_B 59 VLNNHY------------GDIYGIDLDTCKNTFHANLSSV---------------------------PGEVGRSMYSFAI 99 (349)
T ss_dssp EEETTT------------TEEEEEETTTTEEEEEEESCCS---------------------------TTEEEECSSCEEE
T ss_pred EEeCCC------------CcEEEEeCCCCcEEEEEEcccc---------------------------cccccccccceEE
Confidence 886432 3699999999999999988653 0000123456777
Q ss_pred eccCCCCCeEEEEEcCC-----------CCeEEEEEcCCCe
Q psy13477 245 DVGKNCEDTFLYASDEL-----------AYGLLSYSWEENT 274 (295)
Q Consensus 245 D~~~~c~~~~aYItD~~-----------~~gLIVydl~~~~ 274 (295)
+. ++.++|+++.. ...|.+||+++++
T Consensus 100 sp----dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 100 SP----DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp CT----TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred CC----CCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 63 35688888744 5689999999854
No 80
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=92.98 E-value=0.58 Score=41.61 Aligned_cols=74 Identities=11% Similarity=-0.060 Sum_probs=44.6
Q ss_pred CCceeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCC
Q psy13477 84 NNLPVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCD 161 (295)
Q Consensus 84 n~~p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~ 161 (295)
..++.|.... ++++|++=-. -.+|..+..+. ..++.++. + ..+..+..|++|
T Consensus 48 ~~~~egp~~~~~~~~l~~~d~~-----~~~i~~~d~~~-----~~~~~~~~------~----------~~v~~i~~~~dg 101 (326)
T 2ghs_A 48 MLLGEGPTFDPASGTAWWFNIL-----ERELHELHLAS-----GRKTVHAL------P----------FMGSALAKISDS 101 (326)
T ss_dssp CSBEEEEEEETTTTEEEEEEGG-----GTEEEEEETTT-----TEEEEEEC------S----------SCEEEEEEEETT
T ss_pred CCCCcCCeEeCCCCEEEEEECC-----CCEEEEEECCC-----CcEEEEEC------C----------CcceEEEEeCCC
Confidence 3467777775 4677776422 13677776532 12322210 0 125566778899
Q ss_pred cEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEE
Q psy13477 162 RLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIR 197 (295)
Q Consensus 162 rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir 197 (295)
++||...+ .|..||++++++.+
T Consensus 102 ~l~v~~~~--------------gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 102 KQLIASDD--------------GLFLRDTATGVLTL 123 (326)
T ss_dssp EEEEEETT--------------EEEEEETTTCCEEE
T ss_pred eEEEEECC--------------CEEEEECCCCcEEE
Confidence 99997620 39999999998654
No 81
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=92.98 E-value=1.4 Score=38.61 Aligned_cols=78 Identities=13% Similarity=0.117 Sum_probs=58.7
Q ss_pred EeEEEEcCCCc-EEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCC
Q psy13477 152 TYRIKADSCDR-LWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRP 230 (295)
Q Consensus 152 V~~i~iD~c~r-LWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~ 230 (295)
+..+...++++ |++...+. -.|.+||+.++++++++..+..
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d------------~~i~v~d~~~~~~~~~~~~~~~-------------------------- 75 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHS------------NDVSIIDTATNNVIATVPAGSS-------------------------- 75 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGG------------TEEEEEETTTTEEEEEEECSSS--------------------------
T ss_pred cceEEECCCCCEEEEECCCC------------CeEEEEECCCCeEEEEEECCCC--------------------------
Confidence 56778888886 45654321 2699999999999988776543
Q ss_pred cccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 231 EDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 231 ~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
...+++.. ++.++|++......|.+||+++++..+..
T Consensus 76 --------v~~~~~sp----dg~~l~~~~~~~~~v~v~d~~~~~~~~~~ 112 (391)
T 1l0q_A 76 --------PQGVAVSP----DGKQVYVTNMASSTLSVIDTTSNTVAGTV 112 (391)
T ss_dssp --------EEEEEECT----TSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred --------ccceEECC----CCCEEEEEECCCCEEEEEECCCCeEEEEE
Confidence 55667764 36789999888889999999999887655
No 82
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=92.95 E-value=2.3 Score=37.24 Aligned_cols=59 Identities=17% Similarity=0.173 Sum_probs=43.5
Q ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELA 262 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~ 262 (295)
..|.+||+++++.++.+..... ...++++. ++.++|++....
T Consensus 224 ~~v~~~d~~~~~~~~~~~~~~~----------------------------------~~~~~~s~----dg~~l~~s~~~d 265 (391)
T 1l0q_A 224 NTVSMIDTGTNKITARIPVGPD----------------------------------PAGIAVTP----DGKKVYVALSFX 265 (391)
T ss_dssp CEEEEEETTTTEEEEEEECCSS----------------------------------EEEEEECT----TSSEEEEEETTT
T ss_pred CcEEEEECCCCeEEEEEecCCC----------------------------------ccEEEEcc----CCCEEEEEcCCC
Confidence 4678888888887776655332 34566653 357899998888
Q ss_pred CeEEEEEcCCCeEEEEe
Q psy13477 263 YGLLSYSWEENTSWRAS 279 (295)
Q Consensus 263 ~gLIVydl~~~~swRv~ 279 (295)
..|.+||+++++.-+..
T Consensus 266 ~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 266 NTVSVIDTATNTITATM 282 (391)
T ss_dssp TEEEEEETTTTEEEEEE
T ss_pred CEEEEEECCCCcEEEEE
Confidence 99999999999876654
No 83
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=92.58 E-value=0.34 Score=44.07 Aligned_cols=91 Identities=7% Similarity=0.082 Sum_probs=64.8
Q ss_pred EEEEcCCC-cEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcc
Q psy13477 154 RIKADSCD-RLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPED 232 (295)
Q Consensus 154 ~i~iD~c~-rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~ 232 (295)
.+.++++| +|||.....-... .-...-.|.+||+.|.++++++.+++. .
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~---~g~~~~~v~v~d~~t~~~~~~i~~~~~---------------------------~ 103 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERIT---RGKRSDVVEVWDADKLTFEKEISLPPK---------------------------R 103 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSS---SSCEEEEEEEEETTTCCEEEEEEECTT---------------------------B
T ss_pred ceEECCCCCEEEEEEecccccc---cCCCCCEEEEEECcCCcEEEEEEcCcc---------------------------c
Confidence 77888876 5899875321100 000123699999999999999999865 2
Q ss_pred cCCCCCceeEEEeccCCCCCeEEEEEcCC-CCeEEEEEcCCCeEEEE
Q psy13477 233 ILPGTFIANIAVDVGKNCEDTFLYASDEL-AYGLLSYSWEENTSWRA 278 (295)
Q Consensus 233 ~~~~S~l~di~VD~~~~c~~~~aYItD~~-~~gLIVydl~~~~swRv 278 (295)
...+..-..|+++. ++.++|+++.+ ...|.|||+++++.-+-
T Consensus 104 ~~~g~~p~~i~~sp----dg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 104 VQGLNYDGLFRQTT----DGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp CCBCCCGGGEEECT----TSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred cccCCCcceEEECC----CCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 22345677889985 46799999976 67899999999976554
No 84
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=92.58 E-value=0.35 Score=45.98 Aligned_cols=73 Identities=7% Similarity=0.008 Sum_probs=52.9
Q ss_pred EEeEEEEcC-CCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEE-EcCCCCCCCCceeeeeecchhhhhccccC
Q psy13477 151 TTYRIKADS-CDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKY-QFRPEDILPGTFIANIAVDTDRRIRKYQF 228 (295)
Q Consensus 151 sV~~i~iD~-c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y-~~p~~~~~~~~~~~~ia~~~~~~~~~~~~ 228 (295)
...++.+|+ .|+|||.|.+. -+|..||+.+++++..+ .....
T Consensus 229 ~P~giavd~~~G~lyv~d~~~------------~~V~~~d~~~g~~~~~~~~~~~~------------------------ 272 (433)
T 4hw6_A 229 GAKTCAVHPQNGKIYYTRYHH------------AMISSYDPATGTLTEEEVMMDTK------------------------ 272 (433)
T ss_dssp SBCCCEECTTTCCEEECBTTC------------SEEEEECTTTCCEEEEEEECSCC------------------------
T ss_pred CCCEEEEeCCCCeEEEEECCC------------CEEEEEECCCCeEEEEEeccCCC------------------------
Confidence 346688898 89999999753 26899999988874433 22221
Q ss_pred CCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcC
Q psy13477 229 RPEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWE 271 (295)
Q Consensus 229 ~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~ 271 (295)
..-..|++|. ++.++|++|.....|.++|+.
T Consensus 273 --------~~~~~ia~dp----dG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 273 --------GSNFHIVWHP----TGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp --------SSCEEEEECT----TSSEEEEEETTTTEEEEEEBC
T ss_pred --------CCcccEEEeC----CCCEEEEEeCCCCEEEEEeCC
Confidence 1123689985 356899999999999998865
No 85
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=92.42 E-value=0.39 Score=44.32 Aligned_cols=103 Identities=15% Similarity=0.056 Sum_probs=57.8
Q ss_pred EeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCC--
Q psy13477 152 TYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFR-- 229 (295)
Q Consensus 152 V~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~-- 229 (295)
++++..| .++||+-.. .-+ +|.++|++|+++++++ +++. -|-+-|+.+.+ +-||--
T Consensus 57 tqGL~~~-~~~Ly~stG-~~g-----------~v~~iD~~Tgkv~~~~-l~~~-----~FgeGit~~g~---~Ly~ltw~ 114 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTG-HQG-----------TLRQLSLESAQPVWME-RLGN-----IFAEGLASDGE---RLYQLTWT 114 (268)
T ss_dssp EEEEEEE-TTEEEEEET-TTT-----------EEEECCSSCSSCSEEE-ECTT-----CCEEEEEECSS---CEEEEESS
T ss_pred cceEEEE-CCEEEEEcC-CCC-----------EEEEEECCCCcEEeEE-CCCC-----cceeEEEEeCC---EEEEEEcc
Confidence 4566676 479998532 211 2999999999999999 8875 24334444322 223210
Q ss_pred Cccc---C--CCCCceeEEEecc-CC-C-CCeEEEEEcCCCCeEEEEEcCCCeEEE
Q psy13477 230 PEDI---L--PGTFIANIAVDVG-KN-C-EDTFLYASDELAYGLLSYSWEENTSWR 277 (295)
Q Consensus 230 ~~~~---~--~~S~l~di~VD~~-~~-c-~~~~aYItD~~~~gLIVydl~~~~swR 277 (295)
...+ - ....+..|.+... -+ | ++..+|+|| +..-|.++|-++.+--+
T Consensus 115 ~~~v~V~D~~Tl~~~~ti~~~~eGwGLt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~ 169 (268)
T 3nok_A 115 EGLLFTWSGMPPQRERTTRYSGEGWGLCYWNGKLVRSD-GGTMLTFHEPDGFALVG 169 (268)
T ss_dssp SCEEEEEETTTTEEEEEEECSSCCCCEEEETTEEEEEC-SSSEEEEECTTTCCEEE
T ss_pred CCEEEEEECCcCcEEEEEeCCCceeEEecCCCEEEEEC-CCCEEEEEcCCCCeEEE
Confidence 0000 0 0111222222110 01 2 366888888 67788888888877665
No 86
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=92.33 E-value=0.75 Score=42.16 Aligned_cols=82 Identities=11% Similarity=0.117 Sum_probs=55.8
Q ss_pred ccEEEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhcccc
Q psy13477 148 TLTTTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQ 227 (295)
Q Consensus 148 ~lvsV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~ 227 (295)
+|.....|.++++|+|||.|.+ + +|.+++ +++......++ -
T Consensus 29 ~l~~P~~ia~~pdG~l~V~e~~--g-----------~I~~i~--~g~~~~~~~~~-v----------------------- 69 (352)
T 2ism_A 29 GLEVPWALAFLPDGGMLIAERP--G-----------RIRLFR--EGRLSTYAELS-V----------------------- 69 (352)
T ss_dssp CCSCEEEEEECTTSCEEEEETT--T-----------EEEEEE--TTEEEEEEECC-C-----------------------
T ss_pred CCCCceEEEEcCCCeEEEEeCC--C-----------eEEEEE--CCCccEeecce-E-----------------------
Confidence 5677889999999999999975 1 588888 44432222333 1
Q ss_pred CCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCC-----CeEEEEEcCCC
Q psy13477 228 FRPEDILPGTFIANIAVDVGKNCEDTFLYASDELA-----YGLLSYSWEEN 273 (295)
Q Consensus 228 ~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~-----~gLIVydl~~~ 273 (295)
.......+..|+++..- -.++++|+++... ..|..|+...+
T Consensus 70 ----~~~g~~~p~gia~~pdf-~~~g~lYv~~~~~~~~~~~~v~r~~~~~~ 115 (352)
T 2ism_A 70 ----YHRGESGLLGLALHPRF-PQEPYVYAYRTVAEGGLRNQVVRLRHLGE 115 (352)
T ss_dssp ----CCSTTCSEEEEEECTTT-TTSCEEEEEEEECTTSSEEEEEEEEECSS
T ss_pred ----eecCCCCceeEEECCCC-CCCCEEEEEEecCCCCCccEEEEEEeCCC
Confidence 12233568899998520 1247999999864 68999999865
No 87
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=91.94 E-value=0.95 Score=38.21 Aligned_cols=60 Identities=10% Similarity=-0.018 Sum_probs=46.7
Q ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELA 262 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~ 262 (295)
-+|.+||+.++++++++.++.. . .....++++. ++.++|+++...
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~---------------------------~----~~~~~~~~s~----dg~~l~v~~~~~ 55 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADA---------------------------G----PTPMVPMVAP----GGRIAYATVNKS 55 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTC---------------------------T----TCCCCEEECT----TSSEEEEEETTT
T ss_pred CeEEEEECCCCcEEEEEEcCCC---------------------------C----CCccceEEcC----CCCEEEEEeCCC
Confidence 4799999999999999988763 0 0134567764 356899999988
Q ss_pred CeEEEEEcCCCeEEE
Q psy13477 263 YGLLSYSWEENTSWR 277 (295)
Q Consensus 263 ~gLIVydl~~~~swR 277 (295)
..|.+||+.+++.-+
T Consensus 56 ~~v~~~d~~~~~~~~ 70 (337)
T 1pby_B 56 ESLVKIDLVTGETLG 70 (337)
T ss_dssp TEEEEEETTTCCEEE
T ss_pred CeEEEEECCCCCeEe
Confidence 899999999988654
No 88
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=91.66 E-value=1.5 Score=40.57 Aligned_cols=46 Identities=17% Similarity=0.065 Sum_probs=31.9
Q ss_pred EEEEcCCC-cEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcC
Q psy13477 154 RIKADSCD-RLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFR 202 (295)
Q Consensus 154 ~i~iD~c~-rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p 202 (295)
.+.+.++| +|||..+...... .-...-.|.+||+.|.++++++.++
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~---rg~~~~~v~viD~~t~~~~~~i~~~ 116 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIA---KGKRTDYVEVFDPVTFLPIADIELP 116 (373)
T ss_pred CeEECCCCCEEEEEeccccccc---cCCCCCeEEEEECCCCcEEEEEECC
Confidence 66777776 5999986532210 0012346889999999999999987
No 89
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=91.60 E-value=2.7 Score=36.67 Aligned_cols=80 Identities=15% Similarity=0.311 Sum_probs=55.0
Q ss_pred EEeEEEEcCCCc-EEEEeCCCCCCCCCccccCCceEEEEECCCCc-------EE-----EEEEcCCCCCCCCceeeeeec
Q psy13477 151 TTYRIKADSCDR-LWVLDSGTVGIGNTTKQICPYAIHVFDLKTDR-------RI-----RKYQFRPEDILPGTFIANIAV 217 (295)
Q Consensus 151 sV~~i~iD~c~r-LWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~-------li-----r~y~~p~~~~~~~~~~~~ia~ 217 (295)
.+..+.++++|+ |++.|.|. -++.+||+..+. +. ....++.
T Consensus 156 ~~~~~~~spdg~~l~~~~~~~------------~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~-------------- 209 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLGT------------DQIHKFNINPNANADNKEKFLTKGTPEAFKVAP-------------- 209 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTT------------TEEEEEEECTTCCTTTCCCCEEEEEEEEEECCT--------------
T ss_pred cceEEEECCCCCEEEEEeCCC------------CEEEEEEEcCCCCcccccceeecccccceecCC--------------
Confidence 467789999987 88988653 247777776543 32 2233332
Q ss_pred chhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEE
Q psy13477 218 DTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRA 278 (295)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv 278 (295)
+.....++++. ++.++|+++.....|.|||+++++.-.+
T Consensus 210 ------------------~~~~~~~~~sp----dg~~l~v~~~~~~~v~v~~~~~g~~~~~ 248 (361)
T 3scy_A 210 ------------------GSGPRHLIFNS----DGKFAYLINEIGGTVIAFRYADGMLDEI 248 (361)
T ss_dssp ------------------TCCEEEEEECT----TSSEEEEEETTTCEEEEEEEETTEEEEE
T ss_pred ------------------CCCCeEEEEcC----CCCEEEEEcCCCCeEEEEEecCCceEEe
Confidence 23456778874 3569999999889999999998865433
No 90
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=91.59 E-value=0.22 Score=49.34 Aligned_cols=113 Identities=19% Similarity=0.245 Sum_probs=69.0
Q ss_pred CCCccEEEeEEEEcC--CCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeec-----
Q psy13477 145 QCDTLTTTYRIKADS--CDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAV----- 217 (295)
Q Consensus 145 ~c~~lvsV~~i~iD~--c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~----- 217 (295)
+|.+|....+|.+|+ .++|||.|.+. -.|..+|++++++......... .-.-.+.||.
T Consensus 134 ~~~~~~~p~~la~dp~~~~~Lyv~~~~~------------~~i~~ID~~~~~v~~l~~~~~~---~~~~p~~ia~~~~~~ 198 (496)
T 3kya_A 134 KCCGFSDNGRLAFDPLNKDHLYICYDGH------------KAIQLIDLKNRMLSSPLNINTI---PTNRIRSIAFNKKIE 198 (496)
T ss_dssp SCBCCCSEEEEEEETTEEEEEEEEEETE------------EEEEEEETTTTEEEEEECCTTS---SCSBEEEEEECCCBT
T ss_pred cccccCCCCEEEEccCCCCEEEEEECCC------------CeEEEEECCCCEEEEEEccCcc---ccCCCcEEEEeeccc
Confidence 477888999999996 58999998752 2488888888887655544321 0011455666
Q ss_pred --chhhh-----h--------c--cccCC--C--c--------ccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEE
Q psy13477 218 --DTDRR-----I--------R--KYQFR--P--E--------DILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSY 268 (295)
Q Consensus 218 --~~~~~-----~--------~--~~~~~--~--~--------~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVy 268 (295)
+.+.+ - + -|.|. + + .+.....-+.+++|. +++++|++|.....|.+|
T Consensus 199 ~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp----~~g~LYvtd~~~g~V~r~ 274 (496)
T 3kya_A 199 GYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHP----INGELYFNSYEKGQVFRL 274 (496)
T ss_dssp TTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECT----TTCCEEEEETTTTEEEEE
T ss_pred ccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcC----CCCeEEEEECCCCEEEEE
Confidence 44432 0 0 11110 0 0 000011123455553 268999999999999999
Q ss_pred EcC-------CCeEE
Q psy13477 269 SWE-------ENTSW 276 (295)
Q Consensus 269 dl~-------~~~sw 276 (295)
|++ +++.|
T Consensus 275 d~~~~~~~~~tg~~~ 289 (496)
T 3kya_A 275 DLVDYFKTIKNGGSW 289 (496)
T ss_dssp CHHHHHHHHHTTCCC
T ss_pred ecccccccccCceee
Confidence 998 77764
No 91
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=91.32 E-value=1.4 Score=38.78 Aligned_cols=124 Identities=10% Similarity=0.027 Sum_probs=78.7
Q ss_pred eeeeEEe-CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCCcEEE
Q psy13477 87 PVGIEVW-RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCDRLWV 165 (295)
Q Consensus 87 p~gi~v~-~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~rLWV 165 (295)
+.++.+. +|+++++. ..++.+++.++ -.+ |++... .. ..++.+....+|++.|
T Consensus 39 ~~~~~~~pdG~ilvs~-------~~~V~~~d~~G-----~~~-----W~~~~~-----~~----~~~~~~~~~~dG~~lv 92 (276)
T 3no2_A 39 CNSVAATKAGEILFSY-------SKGAKMITRDG-----REL-----WNIAAP-----AG----CEMQTARILPDGNALV 92 (276)
T ss_dssp CCEEEECTTSCEEEEC-------BSEEEEECTTS-----CEE-----EEEECC-----TT----CEEEEEEECTTSCEEE
T ss_pred CcCeEECCCCCEEEeC-------CCCEEEECCCC-----CEE-----EEEcCC-----CC----ccccccEECCCCCEEE
Confidence 5566665 89999953 12577776532 123 554421 01 2355677788999999
Q ss_pred EeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEe
Q psy13477 166 LDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVD 245 (295)
Q Consensus 166 LDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD 245 (295)
.|.|. ..++++||. ++++++++.+... ...+......++++
T Consensus 93 ~~~~~-----------~~~v~~vd~-~Gk~l~~~~~~~~---------------------------~~~~~~~~~~v~~~ 133 (276)
T 3no2_A 93 AWCGH-----------PSTILEVNM-KGEVLSKTEFETG---------------------------IERPHAQFRQINKN 133 (276)
T ss_dssp EEEST-----------TEEEEEECT-TSCEEEEEEECCS---------------------------CSSGGGSCSCCEEC
T ss_pred EecCC-----------CCEEEEEeC-CCCEEEEEeccCC---------------------------CCcccccccCceEC
Confidence 99872 136899997 8999999998764 11111122334444
Q ss_pred ccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEec
Q psy13477 246 VGKNCEDTFLYASDELAYGLLSYSWEENTSWRASH 280 (295)
Q Consensus 246 ~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~h 280 (295)
. ++-.+++|.....+++||.+...-|++..
T Consensus 134 ~-----~G~~lv~~~~~~~v~~~d~~G~~~w~~~~ 163 (276)
T 3no2_A 134 K-----KGNYLVPLFATSEVREIAPNGQLLNSVKL 163 (276)
T ss_dssp T-----TSCEEEEETTTTEEEEECTTSCEEEEEEC
T ss_pred C-----CCCEEEEecCCCEEEEECCCCCEEEEEEC
Confidence 2 34466788888888899988667787763
No 92
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=91.12 E-value=1.9 Score=41.86 Aligned_cols=39 Identities=5% Similarity=0.049 Sum_probs=32.1
Q ss_pred CCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 237 TFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 237 S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
.++.++++|. ++.|+|++......|.|||.++++--...
T Consensus 324 ~~~~~~~~sp----dg~~l~va~~~~~~v~v~D~~tg~l~~~i 362 (543)
T 1nir_A 324 PFLHDGGWDS----SHRYFMTAANNSNKVAVIDSKDRRLSALV 362 (543)
T ss_dssp SSCCCEEECT----TSCEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred cCccCceECC----CCCEEEEEecCCCeEEEEECCCCeEEEee
Confidence 4677888885 36799999998889999999999876644
No 93
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=90.65 E-value=2 Score=42.55 Aligned_cols=122 Identities=7% Similarity=0.069 Sum_probs=74.2
Q ss_pred ceeeeEE-------e-CCc-EEEEeccCCC-CCCcEEEEEeCCCCCCCC--CccccCCCccccCCCCCCCCCCCccEEEe
Q psy13477 86 LPVGIEV-------W-RNK-LFVTVPRWED-GVPSTLNYIPLDAATSSS--PNLIPYPSWEANQVPPQPQDQCDTLTTTY 153 (295)
Q Consensus 86 ~p~gi~v-------~-~gR-iFvT~PR~~~-gvP~TL~~i~~~~~~~~s--P~l~PYPsw~~n~~~~~~~~~c~~lvsV~ 153 (295)
-|.+|++ . +|+ ||++-+.-.. -....+..+.....+.-. +..+.++ .+....
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~----------------~~~~p~ 250 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA----------------AYKQCN 250 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE----------------EESCCC
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeec----------------cCCCce
Confidence 4899998 6 555 9998754211 123456677543211100 1011222 122335
Q ss_pred EEEEcC-CCcEEEEeCCCCCCCCCccccCCceEEEEECC-------CCcE-----------EEE-EEcCCCCCCCCceee
Q psy13477 154 RIKADS-CDRLWVLDSGTVGIGNTTKQICPYAIHVFDLK-------TDRR-----------IRK-YQFRPEDILPGTFIA 213 (295)
Q Consensus 154 ~i~iD~-c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~-------td~l-----------ir~-y~~p~~~~~~~~~~~ 213 (295)
++.+|+ .++|++.|.+. -+|..||++ ++++ .+. +.++.
T Consensus 251 giavdp~~g~LYvtd~~~------------g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~---------- 308 (496)
T 3kya_A 251 GATIHPINGELYFNSYEK------------GQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIAD---------- 308 (496)
T ss_dssp CEEECTTTCCEEEEETTT------------TEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSS----------
T ss_pred EEEEcCCCCeEEEEECCC------------CEEEEEecccccccccCceeecccccccccccceeEecCC----------
Confidence 667788 78999999854 269999998 6655 222 33332
Q ss_pred eeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcC
Q psy13477 214 NIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWE 271 (295)
Q Consensus 214 ~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~ 271 (295)
.+.-..|++|. ++.++||+|.....|..+|..
T Consensus 309 ----------------------~~~p~~ia~~p----~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 309 ----------------------PSWEFQIFIHP----TGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp ----------------------SSCCEEEEECT----TSSEEEEEETTTTEEEEEEEE
T ss_pred ----------------------CCCceEEEEcC----CCCEEEEEeCCCCEEEEEecC
Confidence 23446799995 356899999999999996653
No 94
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=90.53 E-value=8.5 Score=34.49 Aligned_cols=116 Identities=15% Similarity=0.149 Sum_probs=77.8
Q ss_pred eeeeEEe--CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCCcEE
Q psy13477 87 PVGIEVW--RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCDRLW 164 (295)
Q Consensus 87 p~gi~v~--~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~rLW 164 (295)
+.|+++. ++++|+..=. +.+|.+++.++ ..++-.|-- ++-..-+|.++..|++|
T Consensus 29 lSGla~~~~~~~L~aV~d~-----~~~I~~ld~~g-----~v~~~i~l~--------------g~~D~EGIa~~~~g~~~ 84 (255)
T 3qqz_A 29 ISSLTWSAQSNTLFSTINK-----PAAIVEMTTNG-----DLIRTIPLD--------------FVKDLETIEYIGDNQFV 84 (255)
T ss_dssp EEEEEEETTTTEEEEEEET-----TEEEEEEETTC-----CEEEEEECS--------------SCSSEEEEEECSTTEEE
T ss_pred cceeEEeCCCCEEEEEECC-----CCeEEEEeCCC-----CEEEEEecC--------------CCCChHHeEEeCCCEEE
Confidence 8999997 6789987622 67899998753 244444320 12235566778999999
Q ss_pred EEeCCCCCCCCCccccCCceEEEEECCCCc---EEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCcee
Q psy13477 165 VLDSGTVGIGNTTKQICPYAIHVFDLKTDR---RIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIAN 241 (295)
Q Consensus 165 VLDtG~~~~~~~~~~~~~pKLvvfDL~td~---lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~d 241 (295)
|.|-+. .+|.+|++.++. .++++.++-. ....+..+..
T Consensus 85 vs~E~~------------~~l~~~~v~~~~~i~~~~~~~~~~~---------------------------~~~~N~g~EG 125 (255)
T 3qqz_A 85 ISDERD------------YAIYVISLTPNSEVKILKKIKIPLQ---------------------------ESPTNCGFEG 125 (255)
T ss_dssp EEETTT------------TEEEEEEECTTCCEEEEEEEECCCS---------------------------SCCCSSCCEE
T ss_pred EEECCC------------CcEEEEEcCCCCeeeeeeeeccccc---------------------------cccccCCcce
Confidence 998765 258899887765 4566666531 1233556889
Q ss_pred EEEeccCCCCCeEEEEEcCCCC-eEEEEE
Q psy13477 242 IAVDVGKNCEDTFLYASDELAY-GLLSYS 269 (295)
Q Consensus 242 i~VD~~~~c~~~~aYItD~~~~-gLIVyd 269 (295)
|++|.. +..+|++-...+ +|+.|+
T Consensus 126 LA~d~~----~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 126 LAYSRQ----DHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp EEEETT----TTEEEEEEESSSEEEEEEE
T ss_pred EEEeCC----CCEEEEEECcCCceEEEEc
Confidence 999964 346777777666 677776
No 95
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=90.21 E-value=1.1 Score=38.25 Aligned_cols=9 Identities=33% Similarity=0.671 Sum_probs=5.3
Q ss_pred eCCcEEEEe
Q psy13477 93 WRNKLFVTV 101 (295)
Q Consensus 93 ~~gRiFvT~ 101 (295)
.+|++++..
T Consensus 106 ~~~~l~v~t 114 (330)
T 3hxj_A 106 FEDILYVTS 114 (330)
T ss_dssp ETTEEEEEC
T ss_pred ECCEEEEEe
Confidence 366666654
No 96
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=90.19 E-value=3.6 Score=36.51 Aligned_cols=59 Identities=12% Similarity=0.151 Sum_probs=41.6
Q ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELA 262 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~ 262 (295)
.+|.+||+.++++++.+..+. ....++++. ++.++|++....
T Consensus 283 g~i~~~d~~~~~~~~~~~~~~----------------------------------~~~~~~~~~----~g~~l~~~~~~~ 324 (433)
T 3bws_A 283 GRLGIYSMDKEKLIDTIGPPG----------------------------------NKRHIVSGN----TENKIYVSDMCC 324 (433)
T ss_dssp EEEEEEETTTTEEEEEEEEEE----------------------------------CEEEEEECS----STTEEEEEETTT
T ss_pred CeEEEEECCCCcEEeeccCCC----------------------------------CcceEEECC----CCCEEEEEecCC
Confidence 467788888877776654332 233456553 355899999999
Q ss_pred CeEEEEEcCCCeEEEEe
Q psy13477 263 YGLLSYSWEENTSWRAS 279 (295)
Q Consensus 263 ~gLIVydl~~~~swRv~ 279 (295)
+.|.+||+++++.-+..
T Consensus 325 ~~v~v~d~~~~~~~~~~ 341 (433)
T 3bws_A 325 SKIEVYDLKEKKVQKSI 341 (433)
T ss_dssp TEEEEEETTTTEEEEEE
T ss_pred CEEEEEECCCCcEEEEe
Confidence 99999999998765544
No 97
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=90.19 E-value=2.8 Score=35.35 Aligned_cols=78 Identities=10% Similarity=0.085 Sum_probs=51.0
Q ss_pred EeEEEEcCCCc-EEEEeCCCCCCCCCccccCCceEEEEECC--CCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccC
Q psy13477 152 TYRIKADSCDR-LWVLDSGTVGIGNTTKQICPYAIHVFDLK--TDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQF 228 (295)
Q Consensus 152 V~~i~iD~c~r-LWVLDtG~~~~~~~~~~~~~pKLvvfDL~--td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~ 228 (295)
+..+.++++|+ |++.+.+. .+|.+||+. ++++...-.++..
T Consensus 40 ~~~~~~spdg~~l~~~~~~~------------~~v~~~~~~~~~~~~~~~~~~~~~------------------------ 83 (343)
T 1ri6_A 40 VQPMVVSPDKRYLYVGVRPE------------FRVLAYRIAPDDGALTFAAESALP------------------------ 83 (343)
T ss_dssp CCCEEECTTSSEEEEEETTT------------TEEEEEEECTTTCCEEEEEEEECS------------------------
T ss_pred CceEEECCCCCEEEEeecCC------------CeEEEEEecCCCCceeeccccccC------------------------
Confidence 44567777776 88877642 257888887 6664433333322
Q ss_pred CCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEE
Q psy13477 229 RPEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWR 277 (295)
Q Consensus 229 ~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swR 277 (295)
.....++++. ++.++|+++...+.|.+||+.+++..+
T Consensus 84 --------~~~~~~~~s~----dg~~l~~~~~~~~~i~~~d~~~~~~~~ 120 (343)
T 1ri6_A 84 --------GSLTHISTDH----QGQFVFVGSYNAGNVSVTRLEDGLPVG 120 (343)
T ss_dssp --------SCCSEEEECT----TSSEEEEEETTTTEEEEEEEETTEEEE
T ss_pred --------CCCcEEEEcC----CCCEEEEEecCCCeEEEEECCCCcccc
Confidence 1345677764 367899999888889999996554444
No 98
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=90.16 E-value=1.6 Score=41.95 Aligned_cols=87 Identities=10% Similarity=0.131 Sum_probs=59.9
Q ss_pred CccEEEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccc
Q psy13477 147 DTLTTTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKY 226 (295)
Q Consensus 147 ~~lvsV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~ 226 (295)
++|...-.|.++++|||||.+... .+|+.++..+++......++..
T Consensus 24 ~~l~~P~~~a~~pdG~l~V~e~~g------------g~I~~~~~~~g~~~~~~~~~~~---------------------- 69 (454)
T 1cru_A 24 SNLNKPHALLWGPDNQIWLTERAT------------GKILRVNPESGSVKTVFQVPEI---------------------- 69 (454)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTT------------CEEEEECTTTCCEEEEEECTTC----------------------
T ss_pred CCCCCceEEEEcCCCcEEEEEcCC------------CEEEEEECCCCcEeEEecCCcc----------------------
Confidence 357777899999999999998631 2688888877765545566653
Q ss_pred cCCCcccC--CCCCceeEEEeccCCCCCeEEEEEcCC------------CCeEEEEEcCCC
Q psy13477 227 QFRPEDIL--PGTFIANIAVDVGKNCEDTFLYASDEL------------AYGLLSYSWEEN 273 (295)
Q Consensus 227 ~~~~~~~~--~~S~l~di~VD~~~~c~~~~aYItD~~------------~~gLIVydl~~~ 273 (295)
... ....+.+|+++..- ..++++|++++. ...|..|++..+
T Consensus 70 -----~~~~~g~~Gllgia~~Pdf-~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~ 124 (454)
T 1cru_A 70 -----VNDADGQNGLLGFAFHPDF-KNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKS 124 (454)
T ss_dssp -----CCCTTSSCSEEEEEECTTT-TTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETT
T ss_pred -----ccccCCCCceeEEEECCCc-CcCCEEEEEEeccccCCCccccccccEEEEEEECCC
Confidence 111 23567899998521 236899999863 346888887654
No 99
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=89.73 E-value=1.4 Score=37.63 Aligned_cols=86 Identities=10% Similarity=0.132 Sum_probs=49.2
Q ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchh-------hhhccccCCCc----ccCCCCCceeEEEeccCCCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTD-------RRIRKYQFRPE----DILPGTFIANIAVDVGKNCE 251 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~-------~~~~~~~~~~~----~~~~~S~l~di~VD~~~~c~ 251 (295)
-.|.+||.+ ++++.++.++.. .+..++.|.+ .++..|.-.-+ .......+..+.+| .
T Consensus 157 ~~l~~~d~~-g~~~~~~~~~~~------~~~~~~~d~~g~l~v~t~~l~~~d~~g~~~~~~~~~~~~~~~~~~~-----~ 224 (330)
T 3hxj_A 157 NYLYAINPD-GTEKWRFKTNDA------ITSAASIGKDGTIYFGSDKVYAINPDGTEKWNFYAGYWTVTRPAIS-----E 224 (330)
T ss_dssp SEEEEECTT-SCEEEEEECSSC------CCSCCEECTTCCEEEESSSEEEECTTSCEEEEECCSSCCCSCCEEC-----T
T ss_pred CEEEEECCC-CCEeEEEecCCC------ceeeeEEcCCCEEEEEeCEEEEECCCCcEEEEEccCCcceeceEEC-----C
Confidence 368899998 888888887654 2233333322 22222220000 00112335556665 2
Q ss_pred CeEEEEEcCCCCeEEEEEcCCCeEEEEecC
Q psy13477 252 DTFLYASDELAYGLLSYSWEENTSWRASHG 281 (295)
Q Consensus 252 ~~~aYItD~~~~gLIVydl~~~~swRv~h~ 281 (295)
++.+|++.. ..+|..||......|+....
T Consensus 225 ~g~l~v~t~-~~gl~~~~~~g~~~~~~~~~ 253 (330)
T 3hxj_A 225 DGTIYVTSL-DGHLYAINPDGTEKWRFKTG 253 (330)
T ss_dssp TSCEEEEET-TTEEEEECTTSCEEEEEECS
T ss_pred CCeEEEEcC-CCeEEEECCCCCEeEEeeCC
Confidence 567888764 68899998777777877654
No 100
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=89.48 E-value=3.4 Score=37.34 Aligned_cols=78 Identities=19% Similarity=0.301 Sum_probs=52.6
Q ss_pred EEcCC-CcEEEEeC--CCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcc
Q psy13477 156 KADSC-DRLWVLDS--GTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPED 232 (295)
Q Consensus 156 ~iD~c-~rLWVLDt--G~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~ 232 (295)
.++++ ++|||... |..+. .....-.|.+||++|+++++++....
T Consensus 260 a~~~dg~~lyv~~~~~~~~~~----~~~~~~~v~viD~~t~~~v~~i~~~~----------------------------- 306 (361)
T 2oiz_A 260 GLHRASGRMYVFMHPDGKEGT----HKFPAAEIWVMDTKTKQRVARIPGRD----------------------------- 306 (361)
T ss_dssp EEETTTTEEEEEEESSCCTTC----TTCCCSEEEEEETTTTEEEEEEECTT-----------------------------
T ss_pred EEecCCCeEEEEEccCCCccc----ccCCCceEEEEECCCCcEEEEEecCC-----------------------------
Confidence 44444 67777642 32211 01123479999999999999875422
Q ss_pred cCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCC--eEEEE
Q psy13477 233 ILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEEN--TSWRA 278 (295)
Q Consensus 233 ~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~--~swRv 278 (295)
...|+++. ++.++|++.. ..|.|||.+++ +--+.
T Consensus 307 ------p~~ia~sp----dg~~l~v~n~--~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 307 ------ALSMTIDQ----QRNLMLTLDG--GNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp ------CCEEEEET----TTTEEEEECS--SCEEEEECSSSSCEEEEE
T ss_pred ------eeEEEECC----CCCEEEEeCC--CeEEEEECCCCcceeeEE
Confidence 45677874 3569999985 78999999999 76544
No 101
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=89.47 E-value=3.7 Score=37.49 Aligned_cols=81 Identities=7% Similarity=0.104 Sum_probs=51.7
Q ss_pred ceeeeEEe-CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCC----
Q psy13477 86 LPVGIEVW-RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSC---- 160 (295)
Q Consensus 86 ~p~gi~v~-~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c---- 160 (295)
-|.++++. +||+||+-.. -.|..+. ++ ..+++-... . .+.++....+|.++++
T Consensus 32 ~P~~ia~~pdG~l~V~e~~------g~I~~i~-~g------~~~~~~~~~---v------~~~g~~~p~gia~~pdf~~~ 89 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERP------GRIRLFR-EG------RLSTYAELS---V------YHRGESGLLGLALHPRFPQE 89 (352)
T ss_dssp CEEEEEECTTSCEEEEETT------TEEEEEE-TT------EEEEEEECC---C------CCSTTCSEEEEEECTTTTTS
T ss_pred CceEEEEcCCCeEEEEeCC------CeEEEEE-CC------CccEeecce---E------eecCCCCceeEEECCCCCCC
Confidence 48999996 8999999632 3666666 32 222221111 0 1223456788899987
Q ss_pred CcEEEEeCCCCCCCCCccccCCceEEEEECCCCcE
Q psy13477 161 DRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRR 195 (295)
Q Consensus 161 ~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~l 195 (295)
++|||.+++..+ ....+|+.|++..+++
T Consensus 90 g~lYv~~~~~~~-------~~~~~v~r~~~~~~~~ 117 (352)
T 2ism_A 90 PYVYAYRTVAEG-------GLRNQVVRLRHLGERG 117 (352)
T ss_dssp CEEEEEEEECTT-------SSEEEEEEEEECSSCE
T ss_pred CEEEEEEecCCC-------CCccEEEEEEeCCCCc
Confidence 899999986532 1235799999987643
No 102
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=89.46 E-value=6.8 Score=32.93 Aligned_cols=30 Identities=27% Similarity=0.379 Sum_probs=23.9
Q ss_pred CceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcC
Q psy13477 238 FIANIAVDVGKNCEDTFLYASDELAYGLLSYSWE 271 (295)
Q Consensus 238 ~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~ 271 (295)
....++++. ++.++|+++.....|.+||++
T Consensus 232 ~~~~i~~s~----dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 232 WAADIHITP----DGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp CEEEEEECT----TSSEEEEEETTTTEEEEEEEC
T ss_pred CccceEECC----CCCEEEEEecCCCEEEEEEEc
Confidence 344677764 356999999988999999998
No 103
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=89.29 E-value=4.9 Score=35.52 Aligned_cols=77 Identities=12% Similarity=0.231 Sum_probs=47.4
Q ss_pred CCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCc
Q psy13477 160 CDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFI 239 (295)
Q Consensus 160 c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l 239 (295)
.++||+.+.. -.|.+||++|++++-++.++..... .........
T Consensus 53 ~~~v~~~~~~-------------g~v~a~d~~tG~~~W~~~~~~~~~~-----------------------~~~~~~~~~ 96 (376)
T 3q7m_A 53 DNVVYAADRA-------------GLVKALNADDGKEIWSVSLAEKDGW-----------------------FSKEPALLS 96 (376)
T ss_dssp TTEEEEECTT-------------SEEEEEETTTCCEEEEEECCC---C-----------------------CSCCCCCEE
T ss_pred CCEEEEEcCC-------------CeEEEEEccCCceeeeecCcccccc-----------------------ccccCcccc
Confidence 6788887531 2699999999999999998764100 000011122
Q ss_pred eeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCe-EEEEe
Q psy13477 240 ANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENT-SWRAS 279 (295)
Q Consensus 240 ~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~-swRv~ 279 (295)
..++++ ++.+|+.... ..|+.+|.++|+ .|+..
T Consensus 97 ~~~~~~------~~~v~v~~~~-g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 97 GGVTVS------GGHVYIGSEK-AQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp EEEEEE------TTEEEEEETT-SEEEEEETTTCCEEEEEE
T ss_pred cCceEe------CCEEEEEcCC-CEEEEEECCCCCEEEEEe
Confidence 344454 4677776542 468888887765 46665
No 104
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=88.87 E-value=3.5 Score=36.64 Aligned_cols=77 Identities=14% Similarity=0.146 Sum_probs=52.9
Q ss_pred EEeEEEEcCCCc-EEEEeCCCCCCCCCccccCCceEEEEECC-CCcEEE--EEEcCCCCCCCCceeeeeecchhhhhccc
Q psy13477 151 TTYRIKADSCDR-LWVLDSGTVGIGNTTKQICPYAIHVFDLK-TDRRIR--KYQFRPEDILPGTFIANIAVDTDRRIRKY 226 (295)
Q Consensus 151 sV~~i~iD~c~r-LWVLDtG~~~~~~~~~~~~~pKLvvfDL~-td~lir--~y~~p~~~~~~~~~~~~ia~~~~~~~~~~ 226 (295)
.+..+.++++|+ |++.|.|. -+|.+||+. ++++.. .+.++.
T Consensus 146 ~~~~~~~spdG~~l~~~~~~~------------~~v~~~~~~~~g~~~~~~~~~~~~----------------------- 190 (365)
T 1jof_A 146 GIHGMVFDPTETYLYSADLTA------------NKLWTHRKLASGEVELVGSVDAPD----------------------- 190 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTT------------TEEEEEEECTTSCEEEEEEEECSS-----------------------
T ss_pred cceEEEECCCCCEEEEEcCCC------------CEEEEEEECCCCCEEEeeeEecCC-----------------------
Confidence 466778888886 77777653 258889998 787643 333332
Q ss_pred cCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcC--CCe
Q psy13477 227 QFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWE--ENT 274 (295)
Q Consensus 227 ~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~--~~~ 274 (295)
.+.....++++. ++.++|+++.....+.||++. +|+
T Consensus 191 --------~g~~p~~~~~sp----dg~~l~v~~~~~~~v~v~~~~~~~g~ 228 (365)
T 1jof_A 191 --------PGDHPRWVAMHP----TGNYLYALMEAGNRICEYVIDPATHM 228 (365)
T ss_dssp --------TTCCEEEEEECT----TSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred --------CCCCCCEeEECC----CCCEEEEEECCCCeEEEEEEeCCCCc
Confidence 123567788874 356999999888888898765 565
No 105
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=88.86 E-value=2.9 Score=36.48 Aligned_cols=49 Identities=6% Similarity=-0.025 Sum_probs=34.0
Q ss_pred CCceeEEEeccCCCCCeEEEEEcCCCCeEEE--EEcCCCeEEEEecCCcccCCCC
Q psy13477 237 TFIANIAVDVGKNCEDTFLYASDELAYGLLS--YSWEENTSWRASHGFFFPDPLL 289 (295)
Q Consensus 237 S~l~di~VD~~~~c~~~~aYItD~~~~gLIV--ydl~~~~swRv~h~~f~pdp~~ 289 (295)
....+++++. ++.++|+++.....+.| +|.++|+.-++.+..-.|.|.+
T Consensus 306 ~~~~~~~~sp----dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~ 356 (361)
T 3scy_A 306 IHPRNFIITP----NGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVC 356 (361)
T ss_dssp SCCCEEEECT----TSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEE
T ss_pred CCCceEEECC----CCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeE
Confidence 3456777774 36799999988888888 4667888777665544455543
No 106
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=88.31 E-value=1.5 Score=41.98 Aligned_cols=85 Identities=11% Similarity=-0.059 Sum_probs=49.2
Q ss_pred CCcEEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEEEEcCCCc-EEEEeCCCCC
Q psy13477 94 RNKLFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRIKADSCDR-LWVLDSGTVG 172 (295)
Q Consensus 94 ~gRiFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i~iD~c~r-LWVLDtG~~~ 172 (295)
.+++||+-..... .-.+|..|+.... -.+.-.|- + . . .. +.++++|+ |||-++....
T Consensus 44 ~~~vyV~~~~~~~-~~~~V~ViD~~t~----~v~~~I~v------G----~---~---P~-va~spDG~~lyVan~~~~r 101 (386)
T 3sjl_D 44 ARRVYVNDPAHFA-AVTQQFVIDGEAG----RVIGMIDG------G----F---L---PN-PVVADDGSFIAHASTVFSR 101 (386)
T ss_dssp TTEEEEEECGGGC-SSEEEEEEETTTT----EEEEEEEE------C----S---S---CE-EEECTTSSCEEEEEEEEEE
T ss_pred CCEEEEEcCcccC-CCCEEEEEECCCC----eEEEEEEC------C----C---C---Cc-EEECCCCCEEEEEcccccc
Confidence 7899999865211 1247888875421 11211111 0 0 1 13 77777765 8998863211
Q ss_pred CCCCccccCCceEEEEECCCCcEEEEEEcCC
Q psy13477 173 IGNTTKQICPYAIHVFDLKTDRRIRKYQFRP 203 (295)
Q Consensus 173 ~~~~~~~~~~pKLvvfDL~td~lir~y~~p~ 203 (295)
.. .-...-.|.+||+.|.++++++.++.
T Consensus 102 ~~---~G~~~~~VsviD~~t~~v~~~I~v~~ 129 (386)
T 3sjl_D 102 IA---RGERTDYVEVFDPVTLLPTADIELPD 129 (386)
T ss_dssp TT---EEEEEEEEEEECTTTCCEEEEEEETT
T ss_pred cc---cCCCCCEEEEEECCCCeEEEEEECCC
Confidence 00 00012359999999999999999986
No 107
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=88.00 E-value=3.5 Score=39.01 Aligned_cols=140 Identities=13% Similarity=0.100 Sum_probs=82.1
Q ss_pred CCceeeeEE---e-CCcEEEEecc---CCC-C----CCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCC---CCCCc
Q psy13477 84 NNLPVGIEV---W-RNKLFVTVPR---WED-G----VPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQ---DQCDT 148 (295)
Q Consensus 84 n~~p~gi~v---~-~gRiFvT~PR---~~~-g----vP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~---~~c~~ 148 (295)
...+.|+.+ + +|||+|.+.. |.. | -...|.....+....+ .+. |..+-.....+ .+-..
T Consensus 62 ~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg--~~~----~~~dL~~~~~~~~~~~g~~ 135 (334)
T 2p9w_A 62 EQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENS--KPV----WSVNFEKVQDEFEKKAGKR 135 (334)
T ss_dssp SEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTC--CCS----EEEESHHHHHHHHHHHSSC
T ss_pred cceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCC--CEE----EEecCcccccccccccccc
Confidence 446799999 4 8999996642 211 2 1345766665411011 111 11110000000 00013
Q ss_pred cEEEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccC
Q psy13477 149 LTTTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQF 228 (295)
Q Consensus 149 lvsV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~ 228 (295)
.-..+.|.+|.+|+.+|.|+... ++|+.+|.....+ ..+.+...
T Consensus 136 ~~~~nDvavD~~GnaYVt~s~~~-----------~~I~rV~pdG~~~-~~~~~~~~------------------------ 179 (334)
T 2p9w_A 136 PFGVVQSAQDRDGNSYVAFALGM-----------PAIARVSADGKTV-STFAWESG------------------------ 179 (334)
T ss_dssp CEEEEEEEECTTSCEEEEEEESS-----------CEEEEECTTSCCE-EEEEECCC------------------------
T ss_pred ccCCceeEECCCCCEEEeCCCCC-----------CeEEEEeCCCCEE-eeeeecCC------------------------
Confidence 45699999999999999998331 5688888875533 33333322
Q ss_pred CCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCC
Q psy13477 229 RPEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEEN 273 (295)
Q Consensus 229 ~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~ 273 (295)
-....-+++.|++.. ++..++++|. .+.|..+|+++-
T Consensus 180 ---~~~~~~G~nGIv~~p----dg~~Liv~~~-~g~L~~fD~~~p 216 (334)
T 2p9w_A 180 ---NGGQRPGYSGITFDP----HSNKLIAFGG-PRALTAFDVSKP 216 (334)
T ss_dssp ---CSSSCCSCSEEEEET----TTTEEEEESS-SSSEEEEECSSS
T ss_pred ---CcccccCcceEEEeC----CCCEEEEEcC-CCeEEEEcCCCC
Confidence 112235789999985 3568888888 888999998843
No 108
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=87.90 E-value=1.9 Score=39.68 Aligned_cols=82 Identities=10% Similarity=0.123 Sum_probs=54.6
Q ss_pred ccEEEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhcccc
Q psy13477 148 TLTTTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQ 227 (295)
Q Consensus 148 ~lvsV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~ 227 (295)
+|.....|.++++|+|||.|.+ + +|.++| .+++ .....++ -
T Consensus 27 ~l~~P~~ia~~pdG~l~V~e~~--g-----------~I~~~d-~~G~-~~~~~~~-v----------------------- 67 (354)
T 3a9g_A 27 DLEVPWSIAPLGGGRYLVTERP--G-----------RLVLIS-PSGK-KLVASFD-V----------------------- 67 (354)
T ss_dssp SCSCEEEEEEEETTEEEEEETT--T-----------EEEEEC-SSCE-EEEEECC-C-----------------------
T ss_pred CCCCCeEEEEcCCCeEEEEeCC--C-----------EEEEEe-CCCc-eEeeccc-e-----------------------
Confidence 5777889999999999999875 1 578887 3454 1112333 1
Q ss_pred CCCcccCCCCCceeEEEeccCCCCCeEEEEEcCC---C----CeEEEEEcCCC
Q psy13477 228 FRPEDILPGTFIANIAVDVGKNCEDTFLYASDEL---A----YGLLSYSWEEN 273 (295)
Q Consensus 228 ~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~---~----~gLIVydl~~~ 273 (295)
.......+..|+++.. -..++++|+++.. . ..|..|+...+
T Consensus 68 ----~~~g~~g~~gia~~pd-f~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~ 115 (354)
T 3a9g_A 68 ----ANVGEAGLLGLALHPE-FPKKSWVYLYASYFAEGGHIRNRVIRGRLDGS 115 (354)
T ss_dssp ----CCSTTCSEEEEEECTT-TTTSCEEEEEEEEECGGGCEEEEEEEEEECSS
T ss_pred ----eecCCCceeeEEeCCC-CCcCCEEEEEEeccCCCCCcceEEEEEEECCC
Confidence 1112346889999852 1235899999874 3 57999998765
No 109
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=87.06 E-value=1.5 Score=41.30 Aligned_cols=71 Identities=3% Similarity=-0.261 Sum_probs=54.4
Q ss_pred CCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCc
Q psy13477 160 CDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFI 239 (295)
Q Consensus 160 c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l 239 (295)
-.|+||.+.|.-. ... .+.++|+.|+++++++..... |
T Consensus 31 ~~~~yV~~~~~~~-------~~d-~vsvID~~t~~v~~~i~vG~~------------------------------P---- 68 (368)
T 1mda_H 31 SRRSHITLPAYFA-------GTT-ENWVSCAGCGVTLGHSLGAFL------------------------------S---- 68 (368)
T ss_dssp TTEEEEEECTTTC-------SSE-EEEEEETTTTEEEEEEEECTT------------------------------C----
T ss_pred CCeEEEECCccCC-------ccc-eEEEEECCCCeEEEEEeCCCC------------------------------C----
Confidence 3689999987532 122 799999999999999998764 2
Q ss_pred eeEEEeccCCCCCeEEEEEcC---------CCCeEEEEEcCCCeEEE
Q psy13477 240 ANIAVDVGKNCEDTFLYASDE---------LAYGLLSYSWEENTSWR 277 (295)
Q Consensus 240 ~di~VD~~~~c~~~~aYItD~---------~~~gLIVydl~~~~swR 277 (295)
.+++.. ++.++|+++. .+..|-|||..+++--+
T Consensus 69 -~i~~sp----Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 69 -LAVAGH----SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp -EEEECT----TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred -ceEECC----CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence 467764 4679999984 34679999999988655
No 110
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=86.88 E-value=4.5 Score=39.18 Aligned_cols=81 Identities=15% Similarity=0.114 Sum_probs=57.7
Q ss_pred EeEEEEcCCCc-EEEEeCCCCCCCCCccccCCceEEEEEC--CCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccC
Q psy13477 152 TYRIKADSCDR-LWVLDSGTVGIGNTTKQICPYAIHVFDL--KTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQF 228 (295)
Q Consensus 152 V~~i~iD~c~r-LWVLDtG~~~~~~~~~~~~~pKLvvfDL--~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~ 228 (295)
+..+.++++|+ |++.+.+ + .|.+||+ +|+++++++....
T Consensus 181 ~~~v~~spdg~~l~v~~~d--~-----------~V~v~D~~~~t~~~~~~i~~g~------------------------- 222 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRD--A-----------RIDMIDLWAKEPTKVAEIKIGI------------------------- 222 (543)
T ss_dssp EEEEEECTTSCEEEEEETT--S-----------EEEEEETTSSSCEEEEEEECCS-------------------------
T ss_pred cceEEECCCCCEEEEECCC--C-----------eEEEEECcCCCCcEEEEEecCC-------------------------
Confidence 66777887764 7777643 1 5899999 8888888776422
Q ss_pred CCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 229 RPEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 229 ~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
....++++..++-++.++|+++...+.+.|||.++++--+..
T Consensus 223 ---------~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i 264 (543)
T 1nir_A 223 ---------EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIV 264 (543)
T ss_dssp ---------EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEE
T ss_pred ---------CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceee
Confidence 245667763111136799999988889999999998876654
No 111
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=85.04 E-value=11 Score=33.20 Aligned_cols=69 Identities=9% Similarity=0.139 Sum_probs=48.8
Q ss_pred CCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCC
Q psy13477 159 SCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTF 238 (295)
Q Consensus 159 ~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~ 238 (295)
..++||+.... -.|.++|++|++++-++.++.. .
T Consensus 102 ~~~~v~v~~~~-------------g~l~a~d~~tG~~~W~~~~~~~---------------------------~------ 135 (376)
T 3q7m_A 102 SGGHVYIGSEK-------------AQVYALNTSDGTVAWQTKVAGE---------------------------A------ 135 (376)
T ss_dssp ETTEEEEEETT-------------SEEEEEETTTCCEEEEEECSSC---------------------------C------
T ss_pred eCCEEEEEcCC-------------CEEEEEECCCCCEEEEEeCCCc---------------------------e------
Confidence 36899996421 2699999999999999988765 1
Q ss_pred ceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCe-EEEEec
Q psy13477 239 IANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENT-SWRASH 280 (295)
Q Consensus 239 l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~-swRv~h 280 (295)
....+++ ++.+|+... ...|+.+|.++|+ .|+...
T Consensus 136 ~~~p~~~------~~~v~v~~~-~g~l~~~d~~tG~~~W~~~~ 171 (376)
T 3q7m_A 136 LSRPVVS------DGLVLIHTS-NGQLQALNEADGAVKWTVNL 171 (376)
T ss_dssp CSCCEEE------TTEEEEECT-TSEEEEEETTTCCEEEEEEC
T ss_pred EcCCEEE------CCEEEEEcC-CCeEEEEECCCCcEEEEEeC
Confidence 1222344 357887643 4589999998886 577764
No 112
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=84.62 E-value=1.2 Score=41.77 Aligned_cols=79 Identities=6% Similarity=-0.068 Sum_probs=54.8
Q ss_pred EEEcCC-CcEEEEeC---CCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCC
Q psy13477 155 IKADSC-DRLWVLDS---GTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRP 230 (295)
Q Consensus 155 i~iD~c-~rLWVLDt---G~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~ 230 (295)
+.++++ +||||... |..-. ....+.+||++|+++++++.++..
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~-------~~~~~~ViD~~t~~vv~~i~vg~~-------------------------- 315 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLA-------AAENTSSVTASVGQTSGPISNGHD-------------------------- 315 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTS-------CEEEEEEEESSSCCEEECCEEEEE--------------------------
T ss_pred eEEcCCCCEEEEEeccccCcccc-------cCCCEEEEECCCCeEEEEEECCCC--------------------------
Confidence 445554 67998754 52110 022455999999999999888653
Q ss_pred cccCCCCCceeEEEeccCCCCCeEEEEEcC-CCCeEEEEEcCCCeEEEE
Q psy13477 231 EDILPGTFIANIAVDVGKNCEDTFLYASDE-LAYGLLSYSWEENTSWRA 278 (295)
Q Consensus 231 ~~~~~~S~l~di~VD~~~~c~~~~aYItD~-~~~gLIVydl~~~~swRv 278 (295)
-..|++.. ++.++|++-. +...|-|+|+++++--+-
T Consensus 316 --------p~gi~~s~----Dg~~l~va~~~~~~~VsVID~~t~kvv~~ 352 (368)
T 1mda_H 316 --------SDAIIAAQ----DGASDNYANSAGTEVLDIYDAASDQDQSS 352 (368)
T ss_dssp --------ECEEEECC----SSSCEEEEEETTTTEEEEEESSSCEEEEE
T ss_pred --------cceEEECC----CCCEEEEEccCCCCeEEEEECCCCcEEEE
Confidence 34566663 3567888888 689999999999876553
No 113
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=83.79 E-value=7.3 Score=34.03 Aligned_cols=74 Identities=12% Similarity=0.027 Sum_probs=53.8
Q ss_pred EEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCccc
Q psy13477 154 RIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDI 233 (295)
Q Consensus 154 ~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~ 233 (295)
.+..+..|.++|.|.+. -+|.+||++ ++++.+|..+..
T Consensus 129 ~v~~~~~G~~lv~~~~~------------~~v~~~d~~-G~~~w~~~~~~~----------------------------- 166 (276)
T 3no2_A 129 QINKNKKGNYLVPLFAT------------SEVREIAPN-GQLLNSVKLSGT----------------------------- 166 (276)
T ss_dssp CCEECTTSCEEEEETTT------------TEEEEECTT-SCEEEEEECSSC-----------------------------
T ss_pred CceECCCCCEEEEecCC------------CEEEEECCC-CCEEEEEECCCC-----------------------------
Confidence 34567889999888642 369999998 999999988643
Q ss_pred CCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCC-eEEEEe
Q psy13477 234 LPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEEN-TSWRAS 279 (295)
Q Consensus 234 ~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~-~swRv~ 279 (295)
+ ..+.++. ++.++|++.....|+++|.++| .-|++.
T Consensus 167 -~----~~~~~~~-----~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 167 -P----FSSAFLD-----NGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp -C----CEEEECT-----TSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred -c----cceeEcC-----CCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 1 1233332 4567888888778999999955 558876
No 114
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=83.08 E-value=16 Score=36.08 Aligned_cols=38 Identities=11% Similarity=0.136 Sum_probs=31.8
Q ss_pred CCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEE
Q psy13477 236 GTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWR 277 (295)
Q Consensus 236 ~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swR 277 (295)
+.++.++.+|. ++.|+|+++.....|.|+|+++++--.
T Consensus 341 ~~~~~d~~~~p----dgr~~~va~~~sn~V~ViD~~t~kl~~ 378 (567)
T 1qks_A 341 ERFLHDGGLDG----SHRYFITAANARNKLVVIDTKEGKLVA 378 (567)
T ss_dssp CSSEEEEEECT----TSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred cccccCceECC----CCCEEEEEeCCCCeEEEEECCCCcEEE
Confidence 45778888884 578999999999999999999997544
No 115
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=82.27 E-value=6.3 Score=38.95 Aligned_cols=84 Identities=8% Similarity=0.075 Sum_probs=58.1
Q ss_pred EEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCC
Q psy13477 151 TTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRP 230 (295)
Q Consensus 151 sV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~ 230 (295)
....+.+-++| |+|=-.|..+. ..+..|+++|.+|++++++++.+..
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g------~~~g~v~vlD~~T~~v~~~~~~~~~-------------------------- 185 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEG------EGPGGILMLDHYSFEPLGKWEIDRG-------------------------- 185 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTS------CSCCEEEEECTTTCCEEEECCSBCT--------------------------
T ss_pred cccceeECCCe-EEEEcCCCcCC------CCCCeEEEEECCCCeEEEEEccCCC--------------------------
Confidence 44455666667 77766666432 3457899999999999999987654
Q ss_pred cccCCCCCceeEEEeccCCCCCeEEEEEcC------------------CCCeEEEEEcCCCeE
Q psy13477 231 EDILPGTFIANIAVDVGKNCEDTFLYASDE------------------LAYGLLSYSWEENTS 275 (295)
Q Consensus 231 ~~~~~~S~l~di~VD~~~~c~~~~aYItD~------------------~~~gLIVydl~~~~s 275 (295)
+..+--++....+ +..+|.++- .+..|.|||+.+++-
T Consensus 186 ----~~~~~Yd~~~~p~----~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~ 240 (462)
T 2ece_A 186 ----DQYLAYDFWWNLP----NEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR 240 (462)
T ss_dssp ----TCCCCCCEEEETT----TTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE
T ss_pred ----CccccceEEECCC----CCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE
Confidence 2222235666543 458899973 368899999998753
No 116
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=81.23 E-value=2.8 Score=38.37 Aligned_cols=84 Identities=4% Similarity=-0.066 Sum_probs=52.3
Q ss_pred ccEEEeEEEEcCCCc-EEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEE-EcCCCCCCCCceeeeeecchhhhhcc
Q psy13477 148 TLTTTYRIKADSCDR-LWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKY-QFRPEDILPGTFIANIAVDTDRRIRK 225 (295)
Q Consensus 148 ~lvsV~~i~iD~c~r-LWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y-~~p~~~~~~~~~~~~ia~~~~~~~~~ 225 (295)
+|.....|..|++|| |||.+.+ -+|.++|.. +++...+ .++.-
T Consensus 16 ~l~~P~~i~~~pdG~~l~V~e~~-------------G~i~~~~~~-g~~~~~~~~~~~v--------------------- 60 (353)
T 2g8s_A 16 KLDHPWALAFLPDNHGMLITLRG-------------GELRHWQAG-KGLSAPLSGVPDV--------------------- 60 (353)
T ss_dssp EESSEEEEEECSTTCCEEEEETT-------------TEEEEEETT-TEECCCCBSCCCC---------------------
T ss_pred CCCCcEEEEEcCCCCEEEEEeCC-------------ceEEEEeCC-CceeeEecCCccc---------------------
Confidence 466778899999999 9999973 158888853 3321111 11111
Q ss_pred ccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCC-------CCeEEEEEcCCC
Q psy13477 226 YQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDEL-------AYGLLSYSWEEN 273 (295)
Q Consensus 226 ~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~-------~~gLIVydl~~~ 273 (295)
.......+..|+++..- -.++++|+++.. ...|..|++..+
T Consensus 61 ------~~~g~~g~~gia~~pdf-~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~ 108 (353)
T 2g8s_A 61 ------WAHGQGGLLDVVLAPDF-AQSRRIWLSYSEVGDDGKAGTAVGYGRLSDD 108 (353)
T ss_dssp ------CCSTTCSEEEEEECTTH-HHHCEEEEEEEEECSSSCEEEEEEEEEECTT
T ss_pred ------ccCCCCCceeEEECCCC-CCCCEEEEEEeCCCCCCCceeEEEEEEECCC
Confidence 11223567899998510 015789999865 346888888765
No 117
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=80.80 E-value=5.8 Score=35.18 Aligned_cols=36 Identities=25% Similarity=0.210 Sum_probs=27.7
Q ss_pred CCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcC-CCeEE
Q psy13477 237 TFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWE-ENTSW 276 (295)
Q Consensus 237 S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~-~~~sw 276 (295)
.....++++. ++.++|++|.+...|.+||++ +|+.-
T Consensus 145 ~~~~~~~~sp----dG~~l~~~~~~~~~v~~~~~~~~g~~~ 181 (365)
T 1jof_A 145 TGIHGMVFDP----TETYLYSADLTANKLWTHRKLASGEVE 181 (365)
T ss_dssp CCEEEEEECT----TSSEEEEEETTTTEEEEEEECTTSCEE
T ss_pred CcceEEEECC----CCCEEEEEcCCCCEEEEEEECCCCCEE
Confidence 3567778774 356899999988899999998 77653
No 118
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=80.74 E-value=5.6 Score=39.31 Aligned_cols=67 Identities=12% Similarity=-0.055 Sum_probs=46.8
Q ss_pred EcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCC
Q psy13477 157 ADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPG 236 (295)
Q Consensus 157 iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~ 236 (295)
.|..++++|...+. -.|.+||+.|+++++++.....
T Consensus 163 ~d~~~~~~V~~~~~------------~~V~viD~~t~~v~~~i~~g~~-------------------------------- 198 (567)
T 1qks_A 163 WDLENLFSVTLRDA------------GQIALIDGSTYEIKTVLDTGYA-------------------------------- 198 (567)
T ss_dssp CCGGGEEEEEETTT------------TEEEEEETTTCCEEEEEECSSC--------------------------------
T ss_pred cCCCceEEEEeCCC------------CeEEEEECCCCeEEEEEeCCCC--------------------------------
Confidence 34456677665432 3699999999999999887653
Q ss_pred CCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcC--CCe
Q psy13477 237 TFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWE--ENT 274 (295)
Q Consensus 237 S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~--~~~ 274 (295)
...+++.. ++.|+|+++. ...|.+||+. +++
T Consensus 199 --p~~v~~Sp----DGr~lyv~~~-dg~V~viD~~~~t~~ 231 (567)
T 1qks_A 199 --VHISRLSA----SGRYLFVIGR-DGKVNMIDLWMKEPT 231 (567)
T ss_dssp --EEEEEECT----TSCEEEEEET-TSEEEEEETTSSSCC
T ss_pred --ccceEECC----CCCEEEEEcC-CCeEEEEECCCCCCc
Confidence 23556653 3678999874 5689999995 554
No 119
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=80.60 E-value=8.2 Score=38.28 Aligned_cols=113 Identities=17% Similarity=0.184 Sum_probs=57.0
Q ss_pred EEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhh-------
Q psy13477 151 TTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRI------- 223 (295)
Q Consensus 151 sV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~------- 223 (295)
.|..+..|..|+|||- .-+ -|..||.++++. +.+.++...-.+..++..|+.|.+.+.
T Consensus 147 ~i~~i~~d~~g~lWig---t~~-----------Gl~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~ 211 (758)
T 3ott_A 147 TIYSIIRTKDNQIYVG---TYN-----------GLCRYIPSNGKF-EGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEG 211 (758)
T ss_dssp CEEEEEECTTCCEEEE---ETT-----------EEEEEETTTTEE-EEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEE
T ss_pred eEEEEEEcCCCCEEEE---eCC-----------CHhhCccCCCce-EEecCCCccccccceeEEEEEECCCCEEEEEECC
Confidence 4778889999999994 211 277899888764 455555431112234556665543221
Q ss_pred ccccCCCcc--cCCCCCcee-EEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEecC
Q psy13477 224 RKYQFRPED--ILPGTFIAN-IAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRASHG 281 (295)
Q Consensus 224 ~~~~~~~~~--~~~~S~l~d-i~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~h~ 281 (295)
|-|.|.++. +..-..+.+ .+-.+.. -.++.++|+- ..||.+||.++++..++.|.
T Consensus 212 Gl~~~~~~~~~~~~~~~l~~~~i~~i~~-d~~g~lWigT--~~Gl~~~~~~~~~~~~~~~~ 269 (758)
T 3ott_A 212 YLFQYFPSTGQIKQTEAFHNNSIKSLAL-DGNGDLLAGT--DNGLYVYHNDTTPLQHIIHD 269 (758)
T ss_dssp EEEEEETTTTEEEEEEEEEEEEEEEEEE-CTTCCEEEEE--TTEEEEECCTTSCCEEECCC
T ss_pred CCeEEcCCCCeEEeccCCCCCeEEEEEE-cCCCCEEEEe--CCceeEEecCCCcEEEEEcC
Confidence 222232211 000000000 0001100 0234444442 67888888888876666654
No 120
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=79.56 E-value=5.9 Score=40.19 Aligned_cols=65 Identities=15% Similarity=0.128 Sum_probs=44.1
Q ss_pred CCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEE-EeccCCCCCeEEEEEc
Q psy13477 181 CPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIA-VDVGKNCEDTFLYASD 259 (295)
Q Consensus 181 ~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~-VD~~~~c~~~~aYItD 259 (295)
..++|.++|++|+++++++..+.. . ...+.|..++ +|...+---.+||..|
T Consensus 221 ~~~~Lyv~d~~tG~li~~i~~~~~---------------------------~-~~~~Gls~~~~~D~d~Dg~~D~~YaGD 272 (570)
T 3hx6_A 221 DKAALLIIDMETGAITRKLEVTGR---------------------------T-GVPNGLSSPRLADNNSDGVADYAYAGD 272 (570)
T ss_dssp CCEEEEEEETTTCCEEEEEEECCS---------------------------T-TSCCCEEEEEEECTTSSSBCCEEEEEE
T ss_pred CccEEEEEECCCCceEEEEecCCC---------------------------C-ccCCccccceEEecCCCCceeEEEEEe
Confidence 468999999999999999998753 1 1223455554 6643222235899999
Q ss_pred CCCCeEEEEEcCCCe
Q psy13477 260 ELAYGLLSYSWEENT 274 (295)
Q Consensus 260 ~~~~gLIVydl~~~~ 274 (295)
.+ +.|--+|+....
T Consensus 273 l~-GnlWRfDl~~~~ 286 (570)
T 3hx6_A 273 LQ-GNLWRFDLIAGK 286 (570)
T ss_dssp TT-SEEEEEECSCSS
T ss_pred CC-CcEEEEEcCCCC
Confidence 85 357777776653
No 121
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=79.45 E-value=7.3 Score=38.65 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=25.4
Q ss_pred EEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEE
Q psy13477 151 TTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRI 196 (295)
Q Consensus 151 sV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~li 196 (295)
.|+.|..|..|+|||+-... + -|..||+++++..
T Consensus 473 ~i~~i~~d~~g~lWi~~~t~-~-----------Gl~~~d~~~~~~~ 506 (758)
T 3ott_A 473 FINQIIPDNEGNVWVLLYNN-K-----------GIDKINPRTREVT 506 (758)
T ss_dssp CEEEEEECTTSCEEEEETTC-S-----------SEEEEETTTTEEE
T ss_pred eeeeEEEcCCCCEEEEccCC-C-----------CcEEEeCCCCceE
Confidence 37888999999999964221 1 2889999988754
No 122
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=78.69 E-value=8 Score=38.58 Aligned_cols=80 Identities=15% Similarity=0.208 Sum_probs=53.2
Q ss_pred EEEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcC-CCCCCCCceeeeeecchhhhhccccC
Q psy13477 150 TTTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFR-PEDILPGTFIANIAVDTDRRIRKYQF 228 (295)
Q Consensus 150 vsV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p-~~~~~~~~~~~~ia~~~~~~~~~~~~ 228 (295)
..|+.+..|..|+|||--. + -|..||.++++. +|... ..
T Consensus 498 ~~i~~i~~d~~g~lWigt~---~-----------Gl~~~~~~~~~~--~~~~~~~~------------------------ 537 (795)
T 4a2l_A 498 KQITTLFRDSHKRLWIGGE---E-----------GLSVFKQEGLDI--QKASILPV------------------------ 537 (795)
T ss_dssp CCEEEEEECTTCCEEEEES---S-----------CEEEEEEETTEE--EECCCSCS------------------------
T ss_pred ceEEEEEECCCCCEEEEeC---C-----------ceEEEeCCCCeE--EEecCCCC------------------------
Confidence 3577889999999999543 1 288899988876 33311 11
Q ss_pred CCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 229 RPEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 229 ~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
...+...+..|..|. ++.++|+-.+ ||..||.++++..+..
T Consensus 538 ---~~l~~~~i~~i~~d~-----~g~lWigT~~--Gl~~~d~~~~~~~~~~ 578 (795)
T 4a2l_A 538 ---SNVTKLFTNCIYEAS-----NGIIWVGTRE--GFYCFNEKDKQIKRYN 578 (795)
T ss_dssp ---CGGGGSCEEEEEECT-----TSCEEEEESS--CEEEEETTTTEEEEEC
T ss_pred ---CCCCCCeeEEEEECC-----CCCEEEEeCC--CceeECCCCCcEEEeC
Confidence 111234567777773 4668887654 8999999888766554
No 123
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=76.62 E-value=8.9 Score=38.38 Aligned_cols=63 Identities=13% Similarity=0.020 Sum_probs=44.0
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCC--
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDEL-- 261 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~-- 261 (295)
+|+++|++|++++-++....+ .-.........+|+ ++.+|+...+
T Consensus 139 ~l~alD~~tG~~~W~~~~~~~---------------------------~~~~~~~~~~p~v~------~~~v~v~~~~~~ 185 (677)
T 1kb0_A 139 RLIALDAATGKEVWHQNTFEG---------------------------QKGSLTITGAPRVF------KGKVIIGNGGAE 185 (677)
T ss_dssp EEEEEETTTCCEEEEEETTTT---------------------------CCSSCBCCSCCEEE------TTEEEECCBCTT
T ss_pred EEEEEECCCCCEEeeecCCcC---------------------------cCcCcccccCcEEE------CCEEEEEecccc
Confidence 699999999999999998722 00011122334454 4678887653
Q ss_pred ---CCeEEEEEcCCCe-EEEEe
Q psy13477 262 ---AYGLLSYSWEENT-SWRAS 279 (295)
Q Consensus 262 ---~~gLIVydl~~~~-swRv~ 279 (295)
.+.|..||.++|+ .|+..
T Consensus 186 ~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 186 YGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp TCCBCEEEEEETTTCCEEEEEE
T ss_pred cCCCCEEEEEECCCCcEEEEec
Confidence 4679999999887 68876
No 124
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=75.97 E-value=19 Score=35.92 Aligned_cols=78 Identities=21% Similarity=0.234 Sum_probs=52.4
Q ss_pred EEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCC
Q psy13477 151 TTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRP 230 (295)
Q Consensus 151 sV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~ 230 (295)
.|..|..|..|+||+--.| -|..||.++++. +.|.....
T Consensus 544 ~i~~i~~d~~g~lWigT~~--------------Gl~~~d~~~~~~-~~~~~~~g-------------------------- 582 (795)
T 4a2l_A 544 FTNCIYEASNGIIWVGTRE--------------GFYCFNEKDKQI-KRYNTTNG-------------------------- 582 (795)
T ss_dssp CEEEEEECTTSCEEEEESS--------------CEEEEETTTTEE-EEECGGGT--------------------------
T ss_pred eeEEEEECCCCCEEEEeCC--------------CceeECCCCCcE-EEeCCCCC--------------------------
Confidence 5678889999999985332 288899988754 34532221
Q ss_pred cccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 231 EDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 231 ~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
.+...+..|..|. ++.++++- ..||..||.++++.....
T Consensus 583 ---l~~~~i~~i~~d~-----~g~lWi~t--~~Gl~~~~~~~~~~~~~~ 621 (795)
T 4a2l_A 583 ---LPNNVVYGILEDS-----FGRLWLST--NRGISCFNPETEKFRNFT 621 (795)
T ss_dssp ---CSCSCEEEEEECT-----TSCEEEEE--TTEEEEEETTTTEEEEEC
T ss_pred ---CchhheEEEEECC-----CCCEEEEc--CCceEEEcCCCCcEEEcC
Confidence 2333466777773 46678875 368999999888765544
No 125
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=75.94 E-value=5.7 Score=37.29 Aligned_cols=74 Identities=14% Similarity=0.104 Sum_probs=48.7
Q ss_pred CceeeeEEe-CCcEEEEeccCCC--------CCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEE
Q psy13477 85 NLPVGIEVW-RNKLFVTVPRWED--------GVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRI 155 (295)
Q Consensus 85 ~~p~gi~v~-~gRiFvT~PR~~~--------gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i 155 (295)
....++.+. +|+|||++---.+ ..-..+-.|..++. -|.--||++.+.- +.++-+.+++
T Consensus 140 H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~---ip~~nPf~~~~i~---------a~G~RNp~Gl 207 (347)
T 3das_A 140 HNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGE---PAPGNPFPGSPVY---------SYGHRNVQGL 207 (347)
T ss_dssp CCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSS---BCTTCSSTTCCEE---------EBCCSBCCEE
T ss_pred ccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCC---ccCCCCCCCCeEE---------eeCCCCcceE
Confidence 345568776 8999999832100 11235666665532 2344577754322 2478899999
Q ss_pred EEcCCCcEEEEeCCC
Q psy13477 156 KADSCDRLWVLDSGT 170 (295)
Q Consensus 156 ~iD~c~rLWVLDtG~ 170 (295)
..|+.|+||+.|.|.
T Consensus 208 a~dp~G~L~~~d~g~ 222 (347)
T 3das_A 208 AWDDKQRLFASEFGQ 222 (347)
T ss_dssp EECTTCCEEEEECCS
T ss_pred EECCCCCEEEEecCC
Confidence 999999999999986
No 126
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=74.16 E-value=14 Score=36.26 Aligned_cols=63 Identities=13% Similarity=0.096 Sum_probs=44.6
Q ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCC-
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDEL- 261 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~- 261 (295)
-.|+++|++|++++-++.++.. . .........+|+ ++.+|+...+
T Consensus 125 g~l~alD~~tG~~~W~~~~~~~---------------------------~-~~~~~~~~P~v~------~g~v~vg~~~~ 170 (571)
T 2ad6_A 125 GHLLALDAKTGKINWEVEVCDP---------------------------K-VGSTLTQAPFVA------KDTVLMGCSGA 170 (571)
T ss_dssp SEEEEEETTTCCEEEEEECCCG---------------------------G-GTCBCCSCCEEE------TTEEEEECBCG
T ss_pred CEEEEEECCCCCEEEEecCCCC---------------------------C-ccceeccCCEEE------CCEEEEEecCC
Confidence 3699999999999999988763 0 011122333444 3578888764
Q ss_pred ----CCeEEEEEcCCCe-EEEEe
Q psy13477 262 ----AYGLLSYSWEENT-SWRAS 279 (295)
Q Consensus 262 ----~~gLIVydl~~~~-swRv~ 279 (295)
.+.|..||.++|+ -|+..
T Consensus 171 ~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 171 ELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp GGTCCCEEEEEETTTCCEEEEEE
T ss_pred ccCCCCEEEEEECCCCcEEEEEc
Confidence 5789999999876 68876
No 127
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=71.96 E-value=22 Score=29.50 Aligned_cols=60 Identities=12% Similarity=0.229 Sum_probs=40.9
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
.|.+||++|+++++.+.+... ...+..++... ++.++... ..++
T Consensus 46 tV~iWd~~tg~~~~~~~~~~~-------------------------------~~~V~~v~~~~----~~~~l~sg-s~Dg 89 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQP-------------------------------GEYISSVAWIK----EGNYLAVG-TSSA 89 (318)
T ss_dssp EEEEEETTTCCEEEEEECCST-------------------------------TCCEEEEEECT----TSSEEEEE-ETTS
T ss_pred EEEEEECCCCCEEEEEEecCC-------------------------------CCeEEEEEECC----CCCEEEEE-ECCC
Confidence 588999999999999988654 12356666653 23344333 3345
Q ss_pred eEEEEEcCCCeEEEEe
Q psy13477 264 GLLSYSWEENTSWRAS 279 (295)
Q Consensus 264 gLIVydl~~~~swRv~ 279 (295)
.|.+||+++++.-+..
T Consensus 90 ~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 90 EVQLWDVQQQKRLRNM 105 (318)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred cEEEeecCCceeEEEe
Confidence 7889999998876654
No 128
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=71.92 E-value=10 Score=36.11 Aligned_cols=63 Identities=10% Similarity=0.192 Sum_probs=47.3
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeE--EEeccCCCCCeEEEEEcCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANI--AVDVGKNCEDTFLYASDEL 261 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di--~VD~~~~c~~~~aYItD~~ 261 (295)
+|.++||++.+++++|.|..+ .|++ +..+ .+.+. +..-+||++..
T Consensus 53 ~i~~iDL~~~kl~k~i~~ekE-----------------------------GPNg-i~~~~~~~~i~---~~DsI~i~~~~ 99 (369)
T 3s9j_A 53 DIVIFDIENQQIAKRIPLHKT-----------------------------GPNG-LPAVFGSRPSP---DSQYILVAQNN 99 (369)
T ss_dssp EEEEEETTTTEEEEEEECBSS-----------------------------STTB-CTTCCCEEESS---STTSEEEEEGG
T ss_pred cEEEEECCCCceeeeeccccC-----------------------------CCCC-cccceeeEEec---CCCEEEEEeCC
Confidence 899999999999999999987 1221 1112 23322 24568999998
Q ss_pred CCeEEEEEcCCCeEEEEe
Q psy13477 262 AYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 262 ~~gLIVydl~~~~swRv~ 279 (295)
.++|..+|.+...-.++.
T Consensus 100 ~~~i~l~n~~G~~~~k~~ 117 (369)
T 3s9j_A 100 ISRLSSINSQGEIIRNYN 117 (369)
T ss_dssp GTEEEEECTTCCEEEEEE
T ss_pred cceEEEECCCceEEEEEe
Confidence 899999999998888875
No 129
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=70.85 E-value=37 Score=33.69 Aligned_cols=127 Identities=18% Similarity=0.206 Sum_probs=74.6
Q ss_pred eeeeEEe-CCc-EEEEeccCCCCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCcc--EEEeEEEEcC--C
Q psy13477 87 PVGIEVW-RNK-LFVTVPRWEDGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTL--TTTYRIKADS--C 160 (295)
Q Consensus 87 p~gi~v~-~gR-iFvT~PR~~~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~l--vsV~~i~iD~--c 160 (295)
...+... +|+ |+|.... .| |....... ..++.|+.-.... ..+ ..|..|..|. .
T Consensus 68 I~~i~~d~~g~~lWigt~~--~G----l~~~d~~~-----~~f~~~~~~~~~~---------~~l~~~~i~~i~~d~~~~ 127 (781)
T 3v9f_A 68 LNEVYTDPVQPVIWIATQR--AG----LNAYNYET-----QSFSVYQYNPEDP---------QSLITNDVTHITSSVQAG 127 (781)
T ss_dssp EEEEEECSSSSEEEEEESS--SC----EEEEETTT-----TEEEEECCCTTCS---------SSCSCSCEEEEEECSSTT
T ss_pred cceEEEcCCCCEEEEEeCC--CC----cceECCCC-----CeEEeeccccCCC---------CCcccCcceEEEecCccC
Confidence 4455555 688 9987621 13 66666432 2455664211000 011 2467788999 9
Q ss_pred CcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCce
Q psy13477 161 DRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIA 240 (295)
Q Consensus 161 ~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~ 240 (295)
|+|||.-.+. .|..||.++++.. .|..... ...+...+.
T Consensus 128 g~lwi~t~~~-------------gl~~~~~~~~~~~-~~~~~~~---------------------------~~l~~~~i~ 166 (781)
T 3v9f_A 128 KGLWVCTYYR-------------GIEYLDIATGKFT-HYNKSTV---------------------------PALPSEQTW 166 (781)
T ss_dssp SEEEEEESSS-------------CEEEEETTTTEEE-EESTTTC---------------------------TTCSCCCEE
T ss_pred CCEEEEECCC-------------CeeEEECCCCeEE-eeccCcc---------------------------cCCCccceE
Confidence 9999953211 3788999887753 4432221 011234467
Q ss_pred eEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEec
Q psy13477 241 NIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRASH 280 (295)
Q Consensus 241 di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~h 280 (295)
.|..|. ++.+||.-. ..||..||.++++.-++.|
T Consensus 167 ~i~~d~-----~g~lwigt~-~~Gl~~~~~~~~~~~~~~~ 200 (781)
T 3v9f_A 167 TATEAE-----DGKLYIGHV-EGGLSILSLNDKSVKHFVH 200 (781)
T ss_dssp EEEEEE-----TTEEEEEET-TTEEEEEETTTTEEEEECC
T ss_pred EEEECC-----CCCEEEEec-CCCeEEEcCCCCceEeeec
Confidence 788874 578888643 2489999999987766554
No 130
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=70.52 E-value=23 Score=33.13 Aligned_cols=86 Identities=16% Similarity=0.124 Sum_probs=56.3
Q ss_pred CccEEEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccc
Q psy13477 147 DTLTTTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKY 226 (295)
Q Consensus 147 ~~lvsV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~ 226 (295)
++|.....|..+++|+|||.+.+ .-+|..++..+++......+|.-
T Consensus 29 ~gL~~P~~ia~~pdG~llVter~------------~G~I~~v~~~~g~~~~v~~~~~v---------------------- 74 (347)
T 3das_A 29 TGLNSPWGLAPLPGGDLLVSSRD------------EATITRVDAKTGRKTELGEVPGV---------------------- 74 (347)
T ss_dssp CCCSSEEEEEECTTSCEEEEETT------------TCEEEEECTTTCCEEEEEECTTC----------------------
T ss_pred cCCCCceEEEEcCCCcEEEEEec------------CCEEEEEECCCCcEeeecccCce----------------------
Confidence 46777889999999999999862 12577888776665333345542
Q ss_pred cCCCcccCCCCCceeEEEeccCCCCCeEEEEEcC--CCCeEEEEEcCC
Q psy13477 227 QFRPEDILPGTFIANIAVDVGKNCEDTFLYASDE--LAYGLLSYSWEE 272 (295)
Q Consensus 227 ~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~--~~~gLIVydl~~ 272 (295)
.......+.+|+++..- -.++++|++.+ ....|+-|.+..
T Consensus 75 -----~~~g~~GllGia~~Pdf-~~~g~lYv~yt~~~~~~v~R~~~~~ 116 (347)
T 3das_A 75 -----SPSGEGGLLGIALSPDY-ASDHMVYAYFTSASDNRIVRMLYDE 116 (347)
T ss_dssp -----CCBTTBSEEEEEECTTH-HHHCEEEEEEECSSSEEEEEEEBCT
T ss_pred -----eecCCCCceeeEecccc-ccCCEEEEEEecCCCCEEEEEEeCC
Confidence 22334678999998510 01467777654 456788887765
No 131
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=70.11 E-value=4.9 Score=36.60 Aligned_cols=56 Identities=9% Similarity=0.009 Sum_probs=33.3
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
.|.+||++|++++.++.. .. .. ...+++ ++.+|++....+
T Consensus 20 ~v~a~d~~tG~~~W~~~~-~~---------------------------~~------s~p~~~------~g~~~v~~s~dg 59 (369)
T 2hz6_A 20 SLHAVSKRTGSIKWTLKE-DP---------------------------VL------QVPTHV------EEPAFLPDPNDG 59 (369)
T ss_dssp EEEEEETTTCCEEEEEEC-CC---------------------------SC------CCC-----------CCEEECTTTC
T ss_pred EEEEEECCCCCEEEEecC-CC---------------------------ce------ecceEc------CCCEEEEeCCCC
Confidence 699999999999999988 33 11 111222 244677766677
Q ss_pred eEEEEEcCCCeE-EEEe
Q psy13477 264 GLLSYSWEENTS-WRAS 279 (295)
Q Consensus 264 gLIVydl~~~~s-wRv~ 279 (295)
.|..+|.++|+. |+..
T Consensus 60 ~l~a~d~~tG~~~w~~~ 76 (369)
T 2hz6_A 60 SLYTLGSKNNEGLTKLP 76 (369)
T ss_dssp CEEEC-----CCSEECS
T ss_pred EEEEEECCCCceeeeee
Confidence 899999988764 6654
No 132
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=69.80 E-value=29 Score=28.55 Aligned_cols=53 Identities=6% Similarity=-0.009 Sum_probs=33.7
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
+|.+||++++++++++..+.. .+..+.+... +.+ ++=..++
T Consensus 247 ~v~iwd~~~~~~~~~~~~~~~---------------------------------~i~~~~~~~~----~~~--~~~~~dg 287 (313)
T 3odt_A 247 TVRIWSKENGSLKQVITLPAI---------------------------------SIWSVDCMSN----GDI--IVGSSDN 287 (313)
T ss_dssp EEEEECTTTCCEEEEEECSSS---------------------------------CEEEEEECTT----SCE--EEEETTS
T ss_pred EEEEEECCCCceeEEEeccCc---------------------------------eEEEEEEccC----CCE--EEEeCCC
Confidence 577888888887777766543 3555665531 233 3323356
Q ss_pred eEEEEEcCCCeE
Q psy13477 264 GLLSYSWEENTS 275 (295)
Q Consensus 264 gLIVydl~~~~s 275 (295)
.|.+||+++++.
T Consensus 288 ~i~iw~~~~~~~ 299 (313)
T 3odt_A 288 LVRIFSQEKSRW 299 (313)
T ss_dssp CEEEEESCGGGC
T ss_pred cEEEEeCCCCce
Confidence 799999988754
No 133
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=67.75 E-value=19 Score=34.20 Aligned_cols=31 Identities=13% Similarity=0.204 Sum_probs=24.0
Q ss_pred eeEEEeccCCCCCeEEEEEcCCCCeEEEEEcC
Q psy13477 240 ANIAVDVGKNCEDTFLYASDELAYGLLSYSWE 271 (295)
Q Consensus 240 ~di~VD~~~~c~~~~aYItD~~~~gLIVydl~ 271 (295)
..|+++...+ ..+|+++++-+...+.|||.+
T Consensus 232 EGLai~~~~~-g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 232 EGLTIYYAAD-GKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEEEECGG-GCEEEEEEEGGGTEEEEEESS
T ss_pred ceEEEEecCC-CCEEEEEEcCCCCEEEEEECC
Confidence 4567764321 247999999999999999997
No 134
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=67.06 E-value=15 Score=33.66 Aligned_cols=74 Identities=12% Similarity=0.105 Sum_probs=46.9
Q ss_pred CceeeeEEe-CCcEEEEeccCCC--------CCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeEE
Q psy13477 85 NLPVGIEVW-RNKLFVTVPRWED--------GVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYRI 155 (295)
Q Consensus 85 ~~p~gi~v~-~gRiFvT~PR~~~--------gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~i 155 (295)
..+.++.+. +|+||++.--... ..-..+-.+..++. -|.--||+..+. -+.++.+.+++
T Consensus 135 h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~---~p~~npf~~~~i---------~a~G~rnp~Gl 202 (354)
T 3a9g_A 135 HNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGR---PPADNPFPNSPI---------WSYGHRNPQGI 202 (354)
T ss_dssp CCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSC---CCTTSSSTTCCE---------EEECCSCCCEE
T ss_pred cCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCC---CCCCCCCCCCcE---------EEEccCCcceE
Confidence 457888886 8999999742110 01135666665431 133345543221 12367789999
Q ss_pred EEcC-CCcEEEEeCCC
Q psy13477 156 KADS-CDRLWVLDSGT 170 (295)
Q Consensus 156 ~iD~-c~rLWVLDtG~ 170 (295)
.+|+ .|+||+.|.|.
T Consensus 203 a~d~~~g~l~v~d~g~ 218 (354)
T 3a9g_A 203 DWHRASGVMVATEHGP 218 (354)
T ss_dssp EECTTTCCEEEEECCS
T ss_pred EEeCCCCCEEEEecCC
Confidence 9999 89999999986
No 135
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=67.05 E-value=23 Score=35.12 Aligned_cols=80 Identities=16% Similarity=0.133 Sum_probs=51.6
Q ss_pred EEEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCC
Q psy13477 150 TTTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFR 229 (295)
Q Consensus 150 vsV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~ 229 (295)
..|..+..|..|+|||--.|. -|..||.++++. +.|..+..
T Consensus 495 ~~i~~i~~d~~g~lWigt~~~-------------Gl~~~~~~~~~~-~~~~~~~~------------------------- 535 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWIGTFGG-------------GVGIYTPDMQLV-RKFNQYEG------------------------- 535 (781)
T ss_dssp SCEEEEEECTTCCEEEEESSS-------------CEEEECTTCCEE-EEECTTTT-------------------------
T ss_pred ceeEEEEEcCCCCEEEEEcCC-------------CEEEEeCCCCeE-EEccCCCC-------------------------
Confidence 356788899999999853321 278899888764 44543222
Q ss_pred CcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeE-EEEEcCCCeEEEEe
Q psy13477 230 PEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGL-LSYSWEENTSWRAS 279 (295)
Q Consensus 230 ~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gL-IVydl~~~~swRv~ 279 (295)
.+...+..|..|. ++.++|+-. .|| ..||.++++..+..
T Consensus 536 ----l~~~~i~~i~~d~-----~g~lWi~T~--~Glv~~~d~~~~~~~~~~ 575 (781)
T 3v9f_A 536 ----FCSNTINQIYRSS-----KGQMWLATG--EGLVCFPSARNFDYQVFQ 575 (781)
T ss_dssp ----CSCSCEEEEEECT-----TSCEEEEET--TEEEEESCTTTCCCEEEC
T ss_pred ----CCCCeeEEEEECC-----CCCEEEEEC--CCceEEECCCCCcEEEcc
Confidence 2334566777773 456777655 477 88888777655543
No 136
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=66.93 E-value=20 Score=35.70 Aligned_cols=63 Identities=16% Similarity=0.102 Sum_probs=43.2
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCC--
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDEL-- 261 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~-- 261 (295)
.|+++|.+|++++-++...... .........+|+ ++.+|+...+
T Consensus 128 ~l~alD~~tG~~~W~~~~~~~~----------------------------~~~~~~~~P~v~------~~~v~vg~~~~~ 173 (668)
T 1kv9_A 128 RLIALDAKTGKAIWSQQTTDPA----------------------------KPYSITGAPRVV------KGKVIIGNGGAE 173 (668)
T ss_dssp EEEEEETTTCCEEEEEECSCTT----------------------------SSCBCCSCCEEE------TTEEEECCBCTT
T ss_pred EEEEEECCCCCEeeeeccCCCC----------------------------CcceecCCCEEE------CCEEEEeCCCCC
Confidence 6999999999999999886430 011112233444 3578887553
Q ss_pred ---CCeEEEEEcCCCeE-EEEec
Q psy13477 262 ---AYGLLSYSWEENTS-WRASH 280 (295)
Q Consensus 262 ---~~gLIVydl~~~~s-wRv~h 280 (295)
.+.|..||.++|+. |+...
T Consensus 174 ~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 174 YGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp TCCBCEEEEEETTTCCEEEEEES
T ss_pred cCCCCEEEEEECCCCcEEEEecc
Confidence 46799999998875 88763
No 137
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=66.30 E-value=27 Score=34.99 Aligned_cols=58 Identities=7% Similarity=0.208 Sum_probs=41.7
Q ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELA 262 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~ 262 (295)
-.|.+||++|++++-++..+.. .. ++ .++. .++.+|+.. .+
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~---------------------------~~--~g---~~~t------agglvf~gt-~d 495 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTI---------------------------FN--GG---TLST------AGNLVFEGS-AD 495 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSS---------------------------CC--CC---EEEE------TTTEEEEEC-TT
T ss_pred eeEEEEECCCCCeEeEccCCCC---------------------------cc--Cc---cceE------CCCEEEEEC-CC
Confidence 3599999999999999887654 11 11 2222 256888884 46
Q ss_pred CeEEEEEcCCCeE-EEEe
Q psy13477 263 YGLLSYSWEENTS-WRAS 279 (295)
Q Consensus 263 ~gLIVydl~~~~s-wRv~ 279 (295)
+.|.+||.++|+- |+..
T Consensus 496 g~l~a~D~~tG~~lw~~~ 513 (689)
T 1yiq_A 496 GRVIAYAADTGEKLWEQP 513 (689)
T ss_dssp SEEEEEETTTCCEEEEEE
T ss_pred CcEEEEECCCCccceeee
Confidence 7899999999975 7776
No 138
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=65.39 E-value=22 Score=32.33 Aligned_cols=80 Identities=13% Similarity=0.201 Sum_probs=49.5
Q ss_pred CCceeeeEEe-CCcEEEEeccCC--------CCCCcEEEEEeCCCCCCCCCccccCCCccccCCCCCCCCCCCccEEEeE
Q psy13477 84 NNLPVGIEVW-RNKLFVTVPRWE--------DGVPSTLNYIPLDAATSSSPNLIPYPSWEANQVPPQPQDQCDTLTTTYR 154 (295)
Q Consensus 84 n~~p~gi~v~-~gRiFvT~PR~~--------~gvP~TL~~i~~~~~~~~sP~l~PYPsw~~n~~~~~~~~~c~~lvsV~~ 154 (295)
+..+.++.+. +|+|||+.=--. ...-..+-.|..++. -|.--||.+-.-. ..+--+.++-+.++
T Consensus 129 ~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~---~p~~npf~~~~~~----~~~i~a~G~rnp~g 201 (353)
T 2g8s_A 129 NHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE---IPDDNPFIKESGV----RAEIWSYGIRNPQG 201 (353)
T ss_dssp SCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC---CCTTCTTTTSTTS----CTTEEEECCSEEEE
T ss_pred cccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC---CCCCCCCcCCCCC----CccEEEEcCcCccc
Confidence 4557889987 899999982110 011236777776532 2334466541100 01112236789999
Q ss_pred EEEcC-CCcEEEEeCCC
Q psy13477 155 IKADS-CDRLWVLDSGT 170 (295)
Q Consensus 155 i~iD~-c~rLWVLDtG~ 170 (295)
+.+|+ .|+||+.|.|.
T Consensus 202 l~~d~~~g~l~~~d~g~ 218 (353)
T 2g8s_A 202 MAMNPWSNALWLNEHGP 218 (353)
T ss_dssp EEEETTTTEEEEEEECS
T ss_pred eEEECCCCCEEEEecCC
Confidence 99999 89999999994
No 139
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=64.95 E-value=24 Score=35.37 Aligned_cols=63 Identities=17% Similarity=0.122 Sum_probs=42.3
Q ss_pred ceEEEEECCCCcEEEEEEcC-CCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFR-PEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDEL 261 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p-~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~ 261 (295)
-.|+++|.+|++++-++... ... .........+|. ++.+|+...+
T Consensus 131 g~l~AlDa~TG~~~W~~~~~~~~~----------------------------~~~~~~~sP~v~------~g~v~vg~~~ 176 (689)
T 1yiq_A 131 GRLEAIDAKTGQRAWSVDTRADHK----------------------------RSYTITGAPRVV------NGKVVIGNGG 176 (689)
T ss_dssp SEEEEEETTTCCEEEEEECCSCTT----------------------------SCCBCCSCCEEE------TTEEEECCBC
T ss_pred CEEEEEECCCCCEeeeecCcCCCC----------------------------CCccccCCcEEE------CCEEEEEeCC
Confidence 36999999999999999886 320 011112223333 3567876543
Q ss_pred -----CCeEEEEEcCCCe-EEEEe
Q psy13477 262 -----AYGLLSYSWEENT-SWRAS 279 (295)
Q Consensus 262 -----~~gLIVydl~~~~-swRv~ 279 (295)
.+.|+.||.++|+ .|+..
T Consensus 177 ~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 177 AEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CccCCCCEEEEEECCCCcEEEEec
Confidence 4679999999988 58876
No 140
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=63.44 E-value=18 Score=31.34 Aligned_cols=21 Identities=24% Similarity=0.385 Sum_probs=17.0
Q ss_pred ceEEEEECCCCcEEEEEEcCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRP 203 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~ 203 (295)
-+|.+||+++++.++++..+.
T Consensus 313 g~i~iwd~~~~~~~~~~~~~~ 333 (397)
T 1sq9_A 313 GKLRFWDVKTKERITTLNMHC 333 (397)
T ss_dssp SEEEEEETTTTEEEEEEECCG
T ss_pred CeEEEEEcCCCceeEEEeccc
Confidence 368899999999998888543
No 141
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=62.55 E-value=19 Score=35.99 Aligned_cols=58 Identities=10% Similarity=0.191 Sum_probs=41.7
Q ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELA 262 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~ 262 (295)
-.|.+||++|++++-++..+.. .. + ..+..+ ++.+|+. ...
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~---------------------------~~--~---g~~~~~------g~~v~~g-~~d 497 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSP---------------------------WN--G---GTLTTA------GNVVFQG-TAD 497 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSS---------------------------CC--C---CEEEET------TTEEEEE-CTT
T ss_pred cEEEEEeCCCCcEEeecCCCCC---------------------------Cc--C---cceEeC------CCEEEEE-CCC
Confidence 4799999999999999887653 10 1 112222 5678888 456
Q ss_pred CeEEEEEcCCCeE-EEEe
Q psy13477 263 YGLLSYSWEENTS-WRAS 279 (295)
Q Consensus 263 ~gLIVydl~~~~s-wRv~ 279 (295)
+.|.+||.++|+- |++.
T Consensus 498 g~l~a~D~~tG~~lw~~~ 515 (677)
T 1kb0_A 498 GRLVAYHAATGEKLWEAP 515 (677)
T ss_dssp SEEEEEETTTCCEEEEEE
T ss_pred CcEEEEECCCCceeeeee
Confidence 7899999998875 6665
No 142
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=62.51 E-value=52 Score=32.40 Aligned_cols=87 Identities=14% Similarity=0.073 Sum_probs=54.8
Q ss_pred EEEEeCCCCCCCCCccccCCceEEEEECCC-----CcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCC
Q psy13477 163 LWVLDSGTVGIGNTTKQICPYAIHVFDLKT-----DRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGT 237 (295)
Q Consensus 163 LWVLDtG~~~~~~~~~~~~~pKLvvfDL~t-----d~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S 237 (295)
+|.++.|... ..+-.|.++|++. +|+|++..+|.. |.=+|-.+=|+- .|
T Consensus 30 ~~~~~~~~~~-------~~~d~la~vDvdp~s~ty~~vi~~~~~p~~----gde~HH~gwn~c---------------ss 83 (462)
T 2ece_A 30 VACLYTGTGI-------NRADFIAVVDVNPKSETYSKIVHKVELPYI----NDELHHFGWNAC---------------SS 83 (462)
T ss_dssp EEEECTTTTC-------CCCCEEEEEECCTTSTTTTSEEEEEECSSS----CCCBCCCEESCC---------------GG
T ss_pred EEeeccCCCC-------CCCCeEEEEECCCCCCCcceEEEEEECCCC----CCcccccchhhh---------------hh
Confidence 4667775432 2466899999998 899999999984 111222111110 11
Q ss_pred CceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCC----eEEEE
Q psy13477 238 FIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEEN----TSWRA 278 (295)
Q Consensus 238 ~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~----~swRv 278 (295)
.+-. +..+.-++.++|++......|.|+|.+++ +..++
T Consensus 84 ~~~~---~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ 125 (462)
T 2ece_A 84 ALCP---NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKV 125 (462)
T ss_dssp GGST---TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEE
T ss_pred hccc---ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeee
Confidence 1222 10100247899999999999999999887 55553
No 143
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=61.88 E-value=36 Score=33.79 Aligned_cols=58 Identities=12% Similarity=0.209 Sum_probs=41.9
Q ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELA 262 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~ 262 (295)
-.|.+||++|++++-++..+.. . .-..+++. ++.+|+.+ .+
T Consensus 438 g~l~A~D~~tG~~~W~~~~~~~---------------------------~-----~~~~~~t~------gg~vf~g~-~d 478 (668)
T 1kv9_A 438 GALLAWDPVKQKAAWKVPYPTH---------------------------W-----NGGTLSTA------GNLVFQGT-AA 478 (668)
T ss_dssp EEEEEEETTTTEEEEEEEESSS---------------------------C-----CCCEEEET------TTEEEEEC-TT
T ss_pred ceEEEEeCCCCcEEEEccCCCC---------------------------C-----cCceeEeC------CCEEEEEC-Cc
Confidence 3599999999999988887654 1 11223332 57888884 46
Q ss_pred CeEEEEEcCCCeE-EEEe
Q psy13477 263 YGLLSYSWEENTS-WRAS 279 (295)
Q Consensus 263 ~gLIVydl~~~~s-wRv~ 279 (295)
+.|.+||.++|+. |++.
T Consensus 479 g~l~a~d~~tG~~l~~~~ 496 (668)
T 1kv9_A 479 GQMHAYSADKGEALWQFE 496 (668)
T ss_dssp SEEEEEETTTCCEEEEEE
T ss_pred ccchhhhhhcChhheEec
Confidence 7899999998874 6765
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=58.96 E-value=39 Score=27.12 Aligned_cols=58 Identities=12% Similarity=0.146 Sum_probs=36.9
Q ss_pred CceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCC
Q psy13477 182 PYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDEL 261 (295)
Q Consensus 182 ~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~ 261 (295)
..+|.+||+.++++.+....+. .+..+++.. ++.+++.+.
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~----------------------------------~v~~~~~sp----dg~~l~~~~-- 60 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPE----------------------------------LFEAPNWSP----DGKYLLLNS-- 60 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESS----------------------------------CCEEEEECT----TSSEEEEEE--
T ss_pred ceeEEEEeCCCCceeeeccCCc----------------------------------ceEeeEECC----CCCEEEEEc--
Confidence 4689999999998775554322 244556553 233444443
Q ss_pred CCeEEEEEcCC-CeEEEEe
Q psy13477 262 AYGLLSYSWEE-NTSWRAS 279 (295)
Q Consensus 262 ~~gLIVydl~~-~~swRv~ 279 (295)
...|.+||+++ ++..++.
T Consensus 61 ~~~i~~~d~~~~~~~~~~~ 79 (297)
T 2ojh_A 61 EGLLYRLSLAGDPSPEKVD 79 (297)
T ss_dssp TTEEEEEESSSCCSCEECC
T ss_pred CCeEEEEeCCCCCCceEec
Confidence 34788999988 7766654
No 145
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=58.32 E-value=45 Score=34.01 Aligned_cols=55 Identities=15% Similarity=0.153 Sum_probs=39.3
Q ss_pred CccEEEeEEEEcCCCcEEE-EeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcC
Q psy13477 147 DTLTTTYRIKADSCDRLWV-LDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFR 202 (295)
Q Consensus 147 ~~lvsV~~i~iD~c~rLWV-LDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p 202 (295)
+.|-|.-.+.+|+.|+||+ =|.+.-. .+.-.......++.+|..++++.+-..-|
T Consensus 473 ~~fnsPDnL~fd~~G~LWf~TD~~~~~-~g~~~~~gnn~v~~~dp~tGel~~fl~~P 528 (592)
T 4a9v_A 473 NMFNSPDGLGFDKAGRLWILTDGDSSN-AGDFAGMGNNQMLCADPATGEIRRFMVGP 528 (592)
T ss_dssp TCCCCEEEEEECTTCCEEEEECCCCCC-SGGGTTCCSCEEEEECTTTCCEEEEEECC
T ss_pred CccCCCCceEECCCCCEEEEeCCCcCc-cccccccCCceEEEEeCCCCeEEEEEeCC
Confidence 3699999999999999999 6876421 11111234558999999999976655444
No 146
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=57.25 E-value=39 Score=33.61 Aligned_cols=63 Identities=14% Similarity=0.131 Sum_probs=43.4
Q ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcC--
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDE-- 260 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~-- 260 (295)
-.|+++|.+|++++-++.++.. . .........+|. ++.+|+...
T Consensus 131 g~l~AlDa~TG~~~W~~~~~~~---------------------------~-~~~~~~ssP~v~------~g~V~vg~~g~ 176 (599)
T 1w6s_A 131 GNVAALNAETGETVWKVENSDI---------------------------K-VGSTLTIAPYVV------KDKVIIGSSGA 176 (599)
T ss_dssp SEEEEEETTTCCEEEEEECCCG---------------------------G-GTCBCCSCCEEE------TTEEEECCBCG
T ss_pred CEEEEEECCCCCEEEeecCCCC---------------------------C-ccceeecCCEEE------CCEEEEEeccc
Confidence 3799999999999999988653 0 001122333443 346788654
Q ss_pred ---CCCeEEEEEcCCCe-EEEEe
Q psy13477 261 ---LAYGLLSYSWEENT-SWRAS 279 (295)
Q Consensus 261 ---~~~gLIVydl~~~~-swRv~ 279 (295)
..+.|..||.++|+ .||..
T Consensus 177 e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 177 ELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp GGTCCCEEEEEETTTCCEEEEEE
T ss_pred ccCCCCeEEEEECCCCcEEEEEc
Confidence 25689999999887 58887
No 147
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=56.44 E-value=75 Score=25.39 Aligned_cols=34 Identities=9% Similarity=-0.061 Sum_probs=21.8
Q ss_pred EeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCC-CcEEEE
Q psy13477 152 TYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKT-DRRIRK 198 (295)
Q Consensus 152 V~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~t-d~lir~ 198 (295)
|..+...++|++.+... .-+|.+||+.+ ++..+.
T Consensus 44 v~~~~~spdg~~l~~~~-------------~~~i~~~d~~~~~~~~~~ 78 (297)
T 2ojh_A 44 FEAPNWSPDGKYLLLNS-------------EGLLYRLSLAGDPSPEKV 78 (297)
T ss_dssp CEEEEECTTSSEEEEEE-------------TTEEEEEESSSCCSCEEC
T ss_pred eEeeEECCCCCEEEEEc-------------CCeEEEEeCCCCCCceEe
Confidence 44566777777666531 12688899888 776543
No 148
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=55.86 E-value=16 Score=34.77 Aligned_cols=58 Identities=21% Similarity=0.284 Sum_probs=36.9
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCC--
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDEL-- 261 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~-- 261 (295)
-|.+||| ++++++.+.... +||| .+.++--|..=.+| .||++|-.
T Consensus 51 gL~Vydl-~G~~l~~~~~g~--------~nnV----------------D~r~~~~l~g~~~d--------la~as~R~~~ 97 (355)
T 3amr_A 51 GLVVYSL-DGKMLHSYNTGK--------LNNV----------------DIRYDFPLNGKKVD--------IAAASNRSEG 97 (355)
T ss_dssp EEEEEET-TSCEEEEECCSC--------EEEE----------------EEEEEEEETTEEEE--------EEEEEECSTT
T ss_pred CEEEEcC-CCcEEEEccCCC--------cccE----------------EEecccccCCceEe--------EEEEeCCCCC
Confidence 6999999 999998864322 3443 22221112222233 58999988
Q ss_pred CCeEEEEEc--CCCe
Q psy13477 262 AYGLLSYSW--EENT 274 (295)
Q Consensus 262 ~~gLIVydl--~~~~ 274 (295)
...|-+|++ ++++
T Consensus 98 ~n~l~vf~iDp~~~~ 112 (355)
T 3amr_A 98 KNTIEIYAIDGKNGT 112 (355)
T ss_dssp CCEEEEEEECTTTCC
T ss_pred CCeEEEEEECCCCCc
Confidence 889999966 5554
No 149
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=55.31 E-value=27 Score=33.31 Aligned_cols=78 Identities=10% Similarity=0.049 Sum_probs=48.4
Q ss_pred CCceeeeEEe-CCcEEEEeccCCC---------------------------CCCcEEEEEeCCCCCCCCCccccCCCccc
Q psy13477 84 NNLPVGIEVW-RNKLFVTVPRWED---------------------------GVPSTLNYIPLDAATSSSPNLIPYPSWEA 135 (295)
Q Consensus 84 n~~p~gi~v~-~gRiFvT~PR~~~---------------------------gvP~TL~~i~~~~~~~~sP~l~PYPsw~~ 135 (295)
+..+.++.+. +|+|||++=--.. ..-..+-.|..++. -|.--||++ ..
T Consensus 143 ~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~---ip~~Npf~~-~~ 218 (454)
T 1cru_A 143 DHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGS---IPKDNPSFN-GV 218 (454)
T ss_dssp SCCEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSC---CCTTCCEET-TE
T ss_pred CCCCCeEeECCCCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCC---CCCCCCCCC-CC
Confidence 4568899997 9999999721100 01235666665432 223335542 00
Q ss_pred cCCCCCCCCCCCccEEEeEEEEcCCCcEEEEeCCC
Q psy13477 136 NQVPPQPQDQCDTLTTTYRIKADSCDRLWVLDSGT 170 (295)
Q Consensus 136 n~~~~~~~~~c~~lvsV~~i~iD~c~rLWVLDtG~ 170 (295)
..+--+.++-+.+++..|..|+||+.|.|.
T Consensus 219 -----~~ei~a~G~RNp~gla~dp~G~L~~~d~g~ 248 (454)
T 1cru_A 219 -----VSHIYTLGHRNPQGLAFTPNGKLLQSEQGP 248 (454)
T ss_dssp -----ECSEEEBCCSEEEEEEECTTSCEEEEEECS
T ss_pred -----cceEEEECCCCcceEEECCCCCEEEEecCC
Confidence 001123478899999999999999999885
No 150
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=54.47 E-value=84 Score=26.20 Aligned_cols=39 Identities=10% Similarity=0.118 Sum_probs=24.9
Q ss_pred EeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcC
Q psy13477 152 TYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFR 202 (295)
Q Consensus 152 V~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p 202 (295)
|..+...+++++-+ +|..+ -.|.+||+.++++++.....
T Consensus 89 v~~~~~~~~~~~l~--s~~~d----------g~v~iwd~~~~~~~~~~~~~ 127 (368)
T 3mmy_A 89 VLDVCWSDDGSKVF--TASCD----------KTAKMWDLSSNQAIQIAQHD 127 (368)
T ss_dssp EEEEEECTTSSEEE--EEETT----------SEEEEEETTTTEEEEEEECS
T ss_pred EEEEEECcCCCEEE--EEcCC----------CcEEEEEcCCCCceeecccc
Confidence 55667777766544 22221 26899999999988755433
No 151
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=54.03 E-value=50 Score=27.32 Aligned_cols=57 Identities=12% Similarity=0.261 Sum_probs=35.1
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
.|.+||+++++.++.+..+.. +..+++.. ++.+++++.. .+
T Consensus 206 ~i~~~d~~~~~~~~~~~~~~~----------------------------------v~~~~~s~----~~~~l~~~~~-~~ 246 (337)
T 1gxr_A 206 TVRSWDLREGRQLQQHDFTSQ----------------------------------IFSLGYCP----TGEWLAVGME-SS 246 (337)
T ss_dssp EEEEEETTTTEEEEEEECSSC----------------------------------EEEEEECT----TSSEEEEEET-TS
T ss_pred cEEEEECCCCceEeeecCCCc----------------------------------eEEEEECC----CCCEEEEEcC-CC
Confidence 577777777777776654432 34455542 2344554433 34
Q ss_pred eEEEEEcCCCeEEEEe
Q psy13477 264 GLLSYSWEENTSWRAS 279 (295)
Q Consensus 264 gLIVydl~~~~swRv~ 279 (295)
.|.+||+++++..++.
T Consensus 247 ~i~~~~~~~~~~~~~~ 262 (337)
T 1gxr_A 247 NVEVLHVNKPDKYQLH 262 (337)
T ss_dssp CEEEEETTSSCEEEEC
T ss_pred cEEEEECCCCCeEEEc
Confidence 6889999888876654
No 152
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=54.01 E-value=67 Score=31.50 Aligned_cols=65 Identities=14% Similarity=0.226 Sum_probs=43.0
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
.|+++|++|++++-+++++..... ....+..-..++++ ++.+|+... ..
T Consensus 79 ~v~AlD~~tG~~~W~~~~~~~~~~------------------------~~~~~~~~~g~a~~------~~~v~~~t~-dg 127 (582)
T 1flg_A 79 RLFALDAKTGKRLWTYNHRLPDDI------------------------RPCCDVVNRGAAIY------GDKVFFGTL-DA 127 (582)
T ss_dssp EEEEEESSSCCEEEEEECCCCTTC------------------------CCSSCSCCCCCEEE------TTEEEEEET-TT
T ss_pred CEEEEECCCCcEEEEEcCCCCccc------------------------ccccccCCCccEEE------CCEEEEEeC-CC
Confidence 699999999999999998765100 00000001234454 467888754 35
Q ss_pred eEEEEEcCCCeE-EEEe
Q psy13477 264 GLLSYSWEENTS-WRAS 279 (295)
Q Consensus 264 gLIVydl~~~~s-wRv~ 279 (295)
.|+.+|.++|+- |+..
T Consensus 128 ~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 128 SVVALNKNTGKVVWKKK 144 (582)
T ss_dssp EEEEEESSSCCEEEEEE
T ss_pred EEEEEECCCCCEEeeec
Confidence 799999998874 8766
No 153
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=52.89 E-value=59 Score=29.00 Aligned_cols=60 Identities=12% Similarity=0.229 Sum_probs=41.7
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
.|.+||+.|+++++.+.+... +..+..++... ++.++.... .++
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~-------------------------------~~~V~sv~fsp----dg~~lasgs-~Dg 169 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQP-------------------------------GEYISSVAWIK----EGNYLAVGT-SSA 169 (420)
T ss_dssp EEEEEETTTCCEEEEEECCST-------------------------------TCCEEEEEECT----TSSEEEEEE-TTS
T ss_pred EEEEEECCCCCEEEEEEecCC-------------------------------CCcEEEEEECC----CCCEEEEEE-CCC
Confidence 689999999999999888654 12466666653 234544433 345
Q ss_pred eEEEEEcCCCeEEEEe
Q psy13477 264 GLLSYSWEENTSWRAS 279 (295)
Q Consensus 264 gLIVydl~~~~swRv~ 279 (295)
.|.+||+++++.-+..
T Consensus 170 ~v~iWd~~~~~~~~~~ 185 (420)
T 4gga_A 170 EVQLWDVQQQKRLRNM 185 (420)
T ss_dssp CEEEEETTTTEEEEEE
T ss_pred eEEEEEcCCCcEEEEE
Confidence 7899999998876654
No 154
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=52.13 E-value=1.1e+02 Score=25.93 Aligned_cols=42 Identities=10% Similarity=0.134 Sum_probs=28.6
Q ss_pred EEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCC
Q psy13477 151 TTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPE 204 (295)
Q Consensus 151 sV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~ 204 (295)
.|..+...+++.+-+ +|..+ -.+.+||+.+++.++++.....
T Consensus 15 ~V~~~~fsp~~~~l~--s~~~d----------g~v~lWd~~~~~~~~~~~~~~~ 56 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVL--TTLYS----------GRVELWNYETQVEVRSIQVTET 56 (304)
T ss_dssp CEEEEEECSSSSEEE--EEETT----------SEEEEEETTTTEEEEEEECCSS
T ss_pred ceEEEEECCCCCEEE--EEcCC----------CcEEEEECCCCceeEEeeccCC
Confidence 366677777766543 22222 3688999999999998876654
No 155
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=51.59 E-value=35 Score=30.06 Aligned_cols=34 Identities=6% Similarity=0.050 Sum_probs=26.7
Q ss_pred CCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCe
Q psy13477 237 TFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENT 274 (295)
Q Consensus 237 S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~ 274 (295)
+.+..+.++. ++.++|++-..++.|.+||+.+++
T Consensus 268 ~~v~~~~~s~----~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 268 SGVLLPFFDP----DTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp SSCEEEEEET----TTTEEEEEETTCSCEEEEEECSST
T ss_pred CceeEEEEcC----CCCEEEEEEcCCCeEEEEEecCCC
Confidence 3466677774 357888888778899999999988
No 156
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=51.48 E-value=1.1e+02 Score=25.59 Aligned_cols=17 Identities=6% Similarity=-0.150 Sum_probs=13.2
Q ss_pred CeEEEEEcCCCeEEEEe
Q psy13477 263 YGLLSYSWEENTSWRAS 279 (295)
Q Consensus 263 ~gLIVydl~~~~swRv~ 279 (295)
..+.+||+.+++.-+..
T Consensus 295 ~~i~~~d~~~~~~~~~~ 311 (369)
T 3zwl_B 295 FEARFYHKIFEEEIGRV 311 (369)
T ss_dssp CEEEEEETTTCCEEEEE
T ss_pred ceeEEEecCCCcchhhe
Confidence 37899999988877654
No 157
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=51.32 E-value=53 Score=27.78 Aligned_cols=36 Identities=6% Similarity=0.066 Sum_probs=23.8
Q ss_pred CceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCC--CeEEEEec
Q psy13477 238 FIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEE--NTSWRASH 280 (295)
Q Consensus 238 ~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~--~~swRv~h 280 (295)
.+..+.+.. ++.++..+ .++.|.+||+.+ + .|.+.+
T Consensus 246 ~v~~~~~~~----~~~~l~~~--~d~~i~i~~~~~~~~-~~~~~~ 283 (372)
T 1k8k_C 246 PLLAVTFIT----ESSLVAAG--HDCFPVLFTYDSAAG-KLSFGG 283 (372)
T ss_dssp CEEEEEEEE----TTEEEEEE--TTSSCEEEEEETTTT-EEEECC
T ss_pred CeEEEEEec----CCCEEEEE--eCCeEEEEEccCcCc-eEEEee
Confidence 356666663 24556555 567899999988 5 466654
No 158
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=50.49 E-value=36 Score=33.48 Aligned_cols=57 Identities=5% Similarity=0.131 Sum_probs=40.5
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
.|.+||++|++++-++..+.. .. + .-+++. ++.+|+.+. ++
T Consensus 467 ~l~A~D~~tG~~~W~~~~~~~---------------------------~~--~---g~~~ta------gglvf~g~~-dg 507 (582)
T 1flg_A 467 SLRAMDPVSGKVVWEHKEHLP---------------------------LW--A---GVLATA------GNLVFTGTG-DG 507 (582)
T ss_dssp EEEEECTTTCCEEEEEEESSC---------------------------CC--S---CCEEET------TTEEEEECT-TS
T ss_pred eEEEEECCCCCEEEEecCCCC---------------------------Cc--c---cceEeC------CCEEEEECC-CC
Confidence 699999999999988877543 10 1 112322 567888764 56
Q ss_pred eEEEEEcCCCe-EEEEe
Q psy13477 264 GLLSYSWEENT-SWRAS 279 (295)
Q Consensus 264 gLIVydl~~~~-swRv~ 279 (295)
.|.+||.++|+ -|+..
T Consensus 508 ~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 508 YFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp EEEEEETTTCCEEEEEE
T ss_pred cEEEEECCCCCEEEEec
Confidence 89999999886 58776
No 159
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=49.39 E-value=40 Score=32.88 Aligned_cols=58 Identities=14% Similarity=0.137 Sum_probs=40.6
Q ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELA 262 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~ 262 (295)
-.|.++|++|++++-++..+.. .. + .-+++. ++.+|+.+. +
T Consensus 444 g~l~a~D~~tG~~~W~~~~~~~---------------------------~~--~---~~~~t~------gg~v~~g~~-d 484 (571)
T 2ad6_A 444 GQIRAFDLTTGKAKWTKWEKFA---------------------------AW--G---GTLYTK------GGLVWYATL-D 484 (571)
T ss_dssp EEEEEECTTTCCEEEEEEESSC---------------------------CC--S---BCEEET------TTEEEEECT-T
T ss_pred CeEEEEECCCCCEEEEecCCCC---------------------------cc--c---eeEEEC------CCEEEEEcC-C
Confidence 3799999999999999887654 10 1 112222 467888743 5
Q ss_pred CeEEEEEcCCCe-EEEEe
Q psy13477 263 YGLLSYSWEENT-SWRAS 279 (295)
Q Consensus 263 ~gLIVydl~~~~-swRv~ 279 (295)
+.|.++|.++|+ -|++.
T Consensus 485 g~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 485 GYLKALDNKDGKELWNFK 502 (571)
T ss_dssp SEEEEEETTTCCEEEEEE
T ss_pred CeEEEEECCCCCEEEEEe
Confidence 689999999887 46665
No 160
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=48.86 E-value=90 Score=28.10 Aligned_cols=38 Identities=16% Similarity=0.325 Sum_probs=25.4
Q ss_pred CceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcC--CCeEEEEe
Q psy13477 238 FIANIAVDVGKNCEDTFLYASDELAYGLLSYSWE--ENTSWRAS 279 (295)
Q Consensus 238 ~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~--~~~swRv~ 279 (295)
.+..+++.. ++.++|++=...+.|.|||+. +++.-+..
T Consensus 104 ~v~~~~~s~----d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~ 143 (450)
T 2vdu_B 104 YIRNLRLTS----DESRLIACADSDKSLLVFDVDKTSKNVLKLR 143 (450)
T ss_dssp CEEEEEECT----TSSEEEEEEGGGTEEEEEEECSSSSSCEEEE
T ss_pred ceEEEEEcC----CCCEEEEEECCCCeEEEEECcCCCCceeeee
Confidence 466666663 356765555556789999999 77665543
No 161
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=48.44 E-value=1.1e+02 Score=26.59 Aligned_cols=58 Identities=10% Similarity=0.115 Sum_probs=37.9
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
.|.+||+.+++.++++.-.. ..+..+++.. ++.+++.+. .++
T Consensus 162 ~i~iwd~~~~~~~~~~~~h~---------------------------------~~v~~~~~~~----~~~~l~s~~-~d~ 203 (420)
T 3vl1_A 162 QLKIWSVKDGSNPRTLIGHR---------------------------------ATVTDIAIID----RGRNVLSAS-LDG 203 (420)
T ss_dssp EEEEEETTTCCCCEEEECCS---------------------------------SCEEEEEEET----TTTEEEEEE-TTS
T ss_pred eEEEEeCCCCcCceEEcCCC---------------------------------CcEEEEEEcC----CCCEEEEEc-CCC
Confidence 58888998888777664322 2466667663 233444333 345
Q ss_pred eEEEEEcCCCeEEEEe
Q psy13477 264 GLLSYSWEENTSWRAS 279 (295)
Q Consensus 264 gLIVydl~~~~swRv~ 279 (295)
.|.+||+++++..+..
T Consensus 204 ~v~iwd~~~~~~~~~~ 219 (420)
T 3vl1_A 204 TIRLWECGTGTTIHTF 219 (420)
T ss_dssp CEEEEETTTTEEEEEE
T ss_pred cEEEeECCCCceeEEe
Confidence 7999999999877755
No 162
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=46.97 E-value=1.9e+02 Score=27.35 Aligned_cols=143 Identities=14% Similarity=0.101 Sum_probs=75.5
Q ss_pred eeeeEEe-CCcEEEEeccCCC----------CCCcEEEEEeCCCCCCCCCccc--cCCCccccCCCCCCCCCCCccEEEe
Q psy13477 87 PVGIEVW-RNKLFVTVPRWED----------GVPSTLNYIPLDAATSSSPNLI--PYPSWEANQVPPQPQDQCDTLTTTY 153 (295)
Q Consensus 87 p~gi~v~-~gRiFvT~PR~~~----------gvP~TL~~i~~~~~~~~sP~l~--PYPsw~~n~~~~~~~~~c~~lvsV~ 153 (295)
..++.+. .|||+|-=..... .-|+.|..+++.. +....++ ++|.--.. .+.+ ..
T Consensus 89 V~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t--~~~~li~~y~~p~~~~~---------~~S~--l~ 155 (381)
T 3q6k_A 89 IYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQ--PNYPEVVRYYFPTRLVE---------KPTY--FG 155 (381)
T ss_dssp EEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSS--TTCCEEEEEECCGGGCC---------CGGG--EE
T ss_pred eeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCC--CCceeEEEEECCHHhcc---------cCCc--cc
Confidence 5778886 8999985322110 1256788888743 1002333 45542211 1233 33
Q ss_pred EEEEc------CC--CcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhcc
Q psy13477 154 RIKAD------SC--DRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRK 225 (295)
Q Consensus 154 ~i~iD------~c--~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~ 225 (295)
.+++| .| +..+|-|+|. +.|+++|+++++--|.-+ +. |..+-+.+-+ |..
T Consensus 156 di~VD~~~~~~~c~~~~aYItD~~~------------~gLIVydl~~~~swRv~~--~~------~~pd~~~~~~--i~G 213 (381)
T 3q6k_A 156 GFAVDVANPKGDCSETFVYITNFLR------------GALFIYDHKKQDSWNVTH--PT------FKAERPTKFD--YGG 213 (381)
T ss_dssp EEEEEESCTTTTSCSEEEEEEETTT------------TEEEEEETTTTEEEEEEC--GG------GSCCSCEEEE--ETT
T ss_pred eEEEecccCCCCCCccEEEEEcCCC------------CcEEEEECCCCcEEEEcc--CC------CccccCcceE--ECC
Confidence 55666 35 4578889862 579999999998665432 11 1111000000 000
Q ss_pred ccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEE
Q psy13477 226 YQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYS 269 (295)
Q Consensus 226 ~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVyd 269 (295)
-.| .-...+..|++.....+++.++|..-..+..|....
T Consensus 214 ~~~-----~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~ 252 (381)
T 3q6k_A 214 KEY-----EFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVN 252 (381)
T ss_dssp EEE-----EECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEE
T ss_pred EEe-----EeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEE
Confidence 000 112356777777644445678888877766666665
No 163
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=46.54 E-value=1.2e+02 Score=26.62 Aligned_cols=60 Identities=7% Similarity=0.084 Sum_probs=34.1
Q ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELA 262 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~ 262 (295)
-.|.+||+.+++..+.+.++.. ...+..+.+.. ++.+++.+. .+
T Consensus 327 g~i~v~~~~~~~~~~~~~~~~h-------------------------------~~~v~~~~~s~----dg~~l~s~~-~d 370 (401)
T 4aez_A 327 NNLSIWSYSSSGLTKQVDIPAH-------------------------------DTRVLYSALSP----DGRILSTAA-SD 370 (401)
T ss_dssp CEEEEEEEETTEEEEEEEEECC-------------------------------SSCCCEEEECT----TSSEEEEEC-TT
T ss_pred CcEEEEecCCccceeEEEecCC-------------------------------CCCEEEEEECC----CCCEEEEEe-CC
Confidence 3577777777776666666543 12455666653 244555543 34
Q ss_pred CeEEEEEcCCCeEEEE
Q psy13477 263 YGLLSYSWEENTSWRA 278 (295)
Q Consensus 263 ~gLIVydl~~~~swRv 278 (295)
+.|.+||+.+++.-+.
T Consensus 371 g~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 371 ENLKFWRVYDGDHVKR 386 (401)
T ss_dssp SEEEEEECCC------
T ss_pred CcEEEEECCCCccccc
Confidence 6899999999876543
No 164
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=46.31 E-value=81 Score=25.75 Aligned_cols=57 Identities=18% Similarity=0.138 Sum_probs=34.0
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
.|.+||+++++.++++.-... .+..+++.. ++.++ +=..++
T Consensus 206 ~i~i~d~~~~~~~~~~~~~~~---------------------------------~i~~~~~~~-----~~~l~-~~~~dg 246 (313)
T 3odt_A 206 LIKLVDMHTGDVLRTYEGHES---------------------------------FVYCIKLLP-----NGDIV-SCGEDR 246 (313)
T ss_dssp EEEEEETTTCCEEEEEECCSS---------------------------------CEEEEEECT-----TSCEE-EEETTS
T ss_pred eEEEEECCchhhhhhhhcCCc---------------------------------eEEEEEEec-----CCCEE-EEecCC
Confidence 577888888887777654332 355556553 12222 222345
Q ss_pred eEEEEEcCCCeEEEEe
Q psy13477 264 GLLSYSWEENTSWRAS 279 (295)
Q Consensus 264 gLIVydl~~~~swRv~ 279 (295)
.|.+||+++++.-+..
T Consensus 247 ~v~iwd~~~~~~~~~~ 262 (313)
T 3odt_A 247 TVRIWSKENGSLKQVI 262 (313)
T ss_dssp EEEEECTTTCCEEEEE
T ss_pred EEEEEECCCCceeEEE
Confidence 7888888888755544
No 165
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=46.29 E-value=95 Score=27.65 Aligned_cols=35 Identities=9% Similarity=0.079 Sum_probs=21.8
Q ss_pred CceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 238 FIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 238 ~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
.+..+..| +.+++.+. .++.|.+||+++++.-+..
T Consensus 364 ~v~~~~~~------~~~l~s~~-~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 364 AVTCLQFN------KNFVITSS-DDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp CEEEEEEC------SSEEEEEE-TTSEEEEEETTTCCEEEEE
T ss_pred CEEEEEEC------CCEEEEEe-CCCeEEEEECCCCceeeee
Confidence 34555554 23444443 3468999999999876644
No 166
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=46.23 E-value=83 Score=28.32 Aligned_cols=78 Identities=14% Similarity=0.192 Sum_probs=41.0
Q ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCccc-CCCCCceeEEEeccCCCCCeEEEEEcCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDI-LPGTFIANIAVDVGKNCEDTFLYASDEL 261 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~-~~~S~l~di~VD~~~~c~~~~aYItD~~ 261 (295)
-.|.+||++++++++++.+... +..+..+.. ...-.|..+.. .....+..|+... ++.++|++-..
T Consensus 262 ~~v~vwd~~~~~~~~~~~~~~~-------~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~i~~~~----~~~~l~~~~~~ 328 (450)
T 2vdu_B 262 DKIFAWDWKTGKNLSTFDYNSL-------IKPYLNDQH--LAPPRFQNENNDIIEFAVSKIIKSK----NLPFVAFFVEA 328 (450)
T ss_dssp SEEEEEETTTCCEEEEEECHHH-------HGGGCCTTS--BC----------CBCCCEEEEEECS----SSSEEEEEETT
T ss_pred CeEEEEECCCCcEeeeecchhh-------hhhhhhhcc--cccccccccccccceEEEEEEEEeC----CCCEEEEEECC
Confidence 3688899999999988876431 000000000 00000000000 1122345555542 46788888767
Q ss_pred CCeEEEEEc--CCC
Q psy13477 262 AYGLLSYSW--EEN 273 (295)
Q Consensus 262 ~~gLIVydl--~~~ 273 (295)
...|.|||+ .++
T Consensus 329 d~~i~iw~~~~~~~ 342 (450)
T 2vdu_B 329 TKCIIILEMSEKQK 342 (450)
T ss_dssp CSEEEEEEECSSST
T ss_pred CCeEEEEEeccCCC
Confidence 789999999 555
No 167
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=45.75 E-value=83 Score=27.16 Aligned_cols=35 Identities=9% Similarity=-0.054 Sum_probs=19.7
Q ss_pred CceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEE
Q psy13477 238 FIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWR 277 (295)
Q Consensus 238 ~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swR 277 (295)
.+..+++... +.++ ++=..++.|-+||+++++.-.
T Consensus 228 ~v~~v~~~p~----~~~l-~s~s~d~~v~iwd~~~~~~~~ 262 (340)
T 1got_B 228 DINAICFFPN----GNAF-ATGSDDATCRLFDLRADQELM 262 (340)
T ss_dssp CEEEEEECTT----SSEE-EEEETTSCEEEEETTTTEEEE
T ss_pred CEEEEEEcCC----CCEE-EEEcCCCcEEEEECCCCcEEE
Confidence 3556666531 2232 232334578899998876544
No 168
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=44.78 E-value=66 Score=28.23 Aligned_cols=80 Identities=10% Similarity=0.187 Sum_probs=42.0
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecch-------hhhhccccCCCc--ccCCCCCce-eEEEeccCCCCCe
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDT-------DRRIRKYQFRPE--DILPGTFIA-NIAVDVGKNCEDT 253 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~-------~~~~~~~~~~~~--~~~~~S~l~-di~VD~~~~c~~~ 253 (295)
+|.+||+++++.+.++.++.. +..++.+. +..|+-|.+... .+.. +-. .-.+.+. ...
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~~-------v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~--~~~~~~~~~~s---~~~ 149 (355)
T 3vu4_A 82 VVHIWDDVKKQDVSRIKVDAP-------VKDLFLSREFIVVSYGDVISVFKFGNPWKRITD--DIRFGGVCEFS---NGL 149 (355)
T ss_dssp EEEEEETTTTEEEEEEECSSC-------EEEEEECSSEEEEEETTEEEEEESSTTCCBSSC--CEEEEEEEEEE---TTE
T ss_pred EEEEEECCCCcEEEEEECCCc-------eEEEEEcCCEEEEEEcCEEEEEECCCCceeeEE--eccCCceEEEE---ccE
Confidence 799999999999999987664 22232221 223444433322 1111 000 0001110 133
Q ss_pred EEEEEcCCCCeEEEEEcCCCeE
Q psy13477 254 FLYASDELAYGLLSYSWEENTS 275 (295)
Q Consensus 254 ~aYItD~~~~gLIVydl~~~~s 275 (295)
.|+.+....+.|.+||+.+++.
T Consensus 150 la~~sg~~~g~v~iwd~~~~~~ 171 (355)
T 3vu4_A 150 LVYSNEFNLGQIHITKLQSSGS 171 (355)
T ss_dssp EEEEESSCTTCEEEEECCC---
T ss_pred EEEeCCCcCcEEEEEECCCCCc
Confidence 4454467788899999999983
No 169
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=44.32 E-value=1.4e+02 Score=24.86 Aligned_cols=79 Identities=11% Similarity=0.073 Sum_probs=48.0
Q ss_pred EEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCC
Q psy13477 151 TTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRP 230 (295)
Q Consensus 151 sV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~ 230 (295)
.|..+...+++++-+. |.. .-.|.+||+.+++.++++.-...
T Consensus 34 ~v~~~~~s~~~~~l~~--~~~----------dg~i~vwd~~~~~~~~~~~~h~~-------------------------- 75 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFS--CSK----------DSSASVWYSLNGERLGTLDGHTG-------------------------- 75 (369)
T ss_dssp CEEEEEECTTSCEEEE--EES----------SSCEEEEETTTCCEEEEECCCSS--------------------------
T ss_pred eEEEEEEcCCCCEEEE--EeC----------CCEEEEEeCCCchhhhhhhhcCC--------------------------
Confidence 4566667666664443 111 12589999999999887653332
Q ss_pred cccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 231 EDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 231 ~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
.+..+++.. ++.+++.+.. ++.|.+||+.+++.-+..
T Consensus 76 -------~v~~~~~~~----~~~~l~s~~~-dg~i~iwd~~~~~~~~~~ 112 (369)
T 3zwl_B 76 -------TIWSIDVDC----FTKYCVTGSA-DYSIKLWDVSNGQCVATW 112 (369)
T ss_dssp -------CEEEEEECT----TSSEEEEEET-TTEEEEEETTTCCEEEEE
T ss_pred -------cEEEEEEcC----CCCEEEEEeC-CCeEEEEECCCCcEEEEe
Confidence 355666653 2334444432 457899999888765544
No 170
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=43.75 E-value=32 Score=34.94 Aligned_cols=24 Identities=8% Similarity=0.068 Sum_probs=21.6
Q ss_pred CCeEEEEEcCCCCeEEEEEcCCCe
Q psy13477 251 EDTFLYASDELAYGLLSYSWEENT 274 (295)
Q Consensus 251 ~~~~aYItD~~~~gLIVydl~~~~ 274 (295)
++.|+|++|.+.+.+-|||.++.+
T Consensus 287 DGk~v~V~~~~s~~VsVid~~~~~ 310 (595)
T 1fwx_A 287 DKKHLCVAGKLSPTVTVLDVTRFD 310 (595)
T ss_dssp TSSEEEEECTTSSBEEEEEGGGHH
T ss_pred CCCEEEEeCCCCCeEEEEECcccc
Confidence 478999999999999999999763
No 171
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=43.55 E-value=1.6e+02 Score=25.37 Aligned_cols=58 Identities=12% Similarity=0.134 Sum_probs=34.7
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
.|.+||++++++++++.-... .+..+++.. ++.++..+. .++
T Consensus 187 ~i~iwd~~~~~~~~~~~~h~~---------------------------------~v~~l~~sp----d~~~l~s~s-~dg 228 (321)
T 3ow8_A 187 IINIFDIATGKLLHTLEGHAM---------------------------------PIRSLTFSP----DSQLLVTAS-DDG 228 (321)
T ss_dssp CEEEEETTTTEEEEEECCCSS---------------------------------CCCEEEECT----TSCEEEEEC-TTS
T ss_pred eEEEEECCCCcEEEEEcccCC---------------------------------ceeEEEEcC----CCCEEEEEc-CCC
Confidence 577889988888776543221 245566653 133443332 345
Q ss_pred eEEEEEcCCCeEEEEe
Q psy13477 264 GLLSYSWEENTSWRAS 279 (295)
Q Consensus 264 gLIVydl~~~~swRv~ 279 (295)
.|.+||+++++.-+..
T Consensus 229 ~i~iwd~~~~~~~~~~ 244 (321)
T 3ow8_A 229 YIKIYDVQHANLAGTL 244 (321)
T ss_dssp CEEEEETTTCCEEEEE
T ss_pred eEEEEECCCcceeEEE
Confidence 6888888887765543
No 172
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=42.81 E-value=55 Score=32.54 Aligned_cols=57 Identities=12% Similarity=0.107 Sum_probs=39.8
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
.|.+||++|++++-++..+.. .. + .-+++. ++.+|+.+. ++
T Consensus 454 ~l~A~D~~tG~~~W~~~~~~~---------------------------~~--~---g~~~ta------gg~vf~gt~-dg 494 (599)
T 1w6s_A 454 QIKAYNAITGDYKWEKMERFA---------------------------VW--G---GTMATA------GDLVFYGTL-DG 494 (599)
T ss_dssp EEEEECTTTCCEEEEEEESSC---------------------------CC--S---BCEEET------TTEEEEECT-TS
T ss_pred eEEEEECCCCCEEeEecCCCC---------------------------cc--C---cceEec------CCEEEEECC-CC
Confidence 799999999999988876543 10 0 113332 567888754 56
Q ss_pred eEEEEEcCCCe-EEEEe
Q psy13477 264 GLLSYSWEENT-SWRAS 279 (295)
Q Consensus 264 gLIVydl~~~~-swRv~ 279 (295)
.|..||.++|+ -|+..
T Consensus 495 ~l~A~D~~tG~~lW~~~ 511 (599)
T 1w6s_A 495 YLKARDSDTGDLLWKFK 511 (599)
T ss_dssp EEEEEETTTCCEEEEEE
T ss_pred eEEEEECCCCCEEEEee
Confidence 79999999887 47765
No 173
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=42.81 E-value=50 Score=29.30 Aligned_cols=18 Identities=11% Similarity=0.082 Sum_probs=12.6
Q ss_pred CCeEEEEEcCCCeEEEEe
Q psy13477 262 AYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 262 ~~gLIVydl~~~~swRv~ 279 (295)
++.|.|||+++++..+..
T Consensus 279 D~~i~vwd~~~~~~~~~~ 296 (344)
T 4gqb_B 279 DCSLAVLDSSLSELFRSQ 296 (344)
T ss_dssp TSCEEEECTTCCEEEEEC
T ss_pred CCeEEEEECCCCcEEEEc
Confidence 346778888888766654
No 174
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=41.84 E-value=1.1e+02 Score=27.83 Aligned_cols=26 Identities=8% Similarity=0.104 Sum_probs=17.4
Q ss_pred EEEEEcC-CCCeEEEEEcCCCeEEEEe
Q psy13477 254 FLYASDE-LAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 254 ~aYItD~-~~~gLIVydl~~~~swRv~ 279 (295)
.||.... +...|.+||+++++..++.
T Consensus 237 la~~~~~~g~~~i~~~d~~~~~~~~l~ 263 (415)
T 2hqs_A 237 LAFALSKTGSLNLYVMDLASGQIRQVT 263 (415)
T ss_dssp EEEEECTTSSCEEEEEETTTCCEEECC
T ss_pred EEEEEecCCCceEEEEECCCCCEEeCc
Confidence 4445443 3456899999988876655
No 175
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=40.15 E-value=96 Score=26.57 Aligned_cols=72 Identities=7% Similarity=0.127 Sum_probs=41.5
Q ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELA 262 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~ 262 (295)
-.|.+||+++++.++++.-+... ...++. .......+..+.+.. ++.+++... .+
T Consensus 258 g~i~i~d~~~~~~~~~~~~~~~~--~~~~~~------------------~~~~~~~v~~~~~~~----~~~~l~~~~-~d 312 (397)
T 1sq9_A 258 GCITLYETEFGERIGSLSVPTHS--SQASLG------------------EFAHSSWVMSLSFND----SGETLCSAG-WD 312 (397)
T ss_dssp EEEEEEETTTCCEEEEECBC----------C------------------CBSBSSCEEEEEECS----SSSEEEEEE-TT
T ss_pred ceEEEEECCCCcccceeccCccc--cccccc------------------ccccCCcEEEEEECC----CCCEEEEEe-CC
Confidence 47899999999988887664320 000000 000223466666653 234555544 45
Q ss_pred CeEEEEEcCCCeEEEEe
Q psy13477 263 YGLLSYSWEENTSWRAS 279 (295)
Q Consensus 263 ~gLIVydl~~~~swRv~ 279 (295)
+.|.|||+++++..+..
T Consensus 313 g~i~iwd~~~~~~~~~~ 329 (397)
T 1sq9_A 313 GKLRFWDVKTKERITTL 329 (397)
T ss_dssp SEEEEEETTTTEEEEEE
T ss_pred CeEEEEEcCCCceeEEE
Confidence 68999999998766544
No 176
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=39.87 E-value=1.4e+02 Score=25.73 Aligned_cols=53 Identities=11% Similarity=0.214 Sum_probs=34.3
Q ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELA 262 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~ 262 (295)
-.|.+||++++++++++.-+.. ...+..+++.. ++.++..+. +
T Consensus 330 ~~i~iwd~~~~~~~~~l~~~~~-------------------------------~~~~~~~~~s~----~g~~l~s~s--d 372 (383)
T 3ei3_B 330 RTIDIYDANSGGLVHQLRDPNA-------------------------------AGIISLNKFSP----TGDVLASGM--G 372 (383)
T ss_dssp CCEEEEETTTCCEEEEECBTTB-------------------------------CSCCCEEEECT----TSSEEEEEE--T
T ss_pred CeEEEEecCCCceeeeecCCCC-------------------------------CceEEEEEEec----CccEEEEec--C
Confidence 3689999999999888765432 12234445553 245565553 5
Q ss_pred CeEEEEEcCC
Q psy13477 263 YGLLSYSWEE 272 (295)
Q Consensus 263 ~gLIVydl~~ 272 (295)
+.|.+||+++
T Consensus 373 ~~i~iw~~~~ 382 (383)
T 3ei3_B 373 FNILIWNRED 382 (383)
T ss_dssp TEEEEEECC-
T ss_pred CcEEEEecCC
Confidence 7899999875
No 177
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=39.72 E-value=1.4e+02 Score=28.72 Aligned_cols=78 Identities=5% Similarity=0.095 Sum_probs=49.7
Q ss_pred EeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCc
Q psy13477 152 TYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPE 231 (295)
Q Consensus 152 V~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~ 231 (295)
|..+...+++++-+. |.. ...|.+||+.+++.++++.....
T Consensus 16 v~~i~~sp~~~~la~--~~~----------~g~v~iwd~~~~~~~~~~~~~~~--------------------------- 56 (814)
T 3mkq_A 16 VKGIDFHPTEPWVLT--TLY----------SGRVEIWNYETQVEVRSIQVTET--------------------------- 56 (814)
T ss_dssp EEEEEECSSSSEEEE--EET----------TSEEEEEETTTTEEEEEEECCSS---------------------------
T ss_pred eEEEEECCCCCEEEE--EeC----------CCEEEEEECCCCceEEEEecCCC---------------------------
Confidence 555666666664432 111 13699999999999998885543
Q ss_pred ccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 232 DILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 232 ~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
.+..++.... +.++..+.. .+.|.|||+.+++.-+..
T Consensus 57 ------~v~~~~~s~~----~~~l~~~~~-dg~i~vw~~~~~~~~~~~ 93 (814)
T 3mkq_A 57 ------PVRAGKFIAR----KNWIIVGSD-DFRIRVFNYNTGEKVVDF 93 (814)
T ss_dssp ------CEEEEEEEGG----GTEEEEEET-TSEEEEEETTTCCEEEEE
T ss_pred ------cEEEEEEeCC----CCEEEEEeC-CCeEEEEECCCCcEEEEE
Confidence 3556666642 344444433 457999999988765544
No 178
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=39.52 E-value=2e+02 Score=25.27 Aligned_cols=63 Identities=14% Similarity=0.185 Sum_probs=39.5
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
.|.+||+++++.++++.++.. .-+..+.+...-. .++...++=..++
T Consensus 237 ~i~iwd~~~~~~~~~~~~~~~--------------------------------~~v~~~~~~~~~s-~~~~~l~s~~~dg 283 (437)
T 3gre_A 237 IIDIWDIRFNVLIRSWSFGDH--------------------------------APITHVEVCQFYG-KNSVIVVGGSSKT 283 (437)
T ss_dssp CEEEEETTTTEEEEEEBCTTC--------------------------------EEEEEEEECTTTC-TTEEEEEEESTTE
T ss_pred eEEEEEcCCccEEEEEecCCC--------------------------------CceEEEEeccccC-CCccEEEEEcCCC
Confidence 477888888888888776554 1244554442211 1343444444456
Q ss_pred eEEEEEcCCCeEEEEe
Q psy13477 264 GLLSYSWEENTSWRAS 279 (295)
Q Consensus 264 gLIVydl~~~~swRv~ 279 (295)
.|.+||+++++.-+..
T Consensus 284 ~i~iwd~~~~~~~~~~ 299 (437)
T 3gre_A 284 FLTIWNFVKGHCQYAF 299 (437)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred cEEEEEcCCCcEEEEE
Confidence 7999999999877655
No 179
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=39.35 E-value=1.1e+02 Score=25.61 Aligned_cols=59 Identities=14% Similarity=0.137 Sum_probs=38.9
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
.|.+||+.++++++++.-... .+..+.+... ++.+++.... ++
T Consensus 96 ~i~v~d~~~~~~~~~~~~~~~---------------------------------~i~~~~~~~~---~~~~l~s~~~-dg 138 (366)
T 3k26_A 96 IIRIINPITMQCIKHYVGHGN---------------------------------AINELKFHPR---DPNLLLSVSK-DH 138 (366)
T ss_dssp EEEEECTTTCCEEEEEESCCS---------------------------------CEEEEEECSS---CTTEEEEEET-TS
T ss_pred EEEEEEchhceEeeeecCCCC---------------------------------cEEEEEECCC---CCCEEEEEeC-CC
Confidence 689999999999888763332 3555666531 1234444332 45
Q ss_pred eEEEEEcCCCeEEEEe
Q psy13477 264 GLLSYSWEENTSWRAS 279 (295)
Q Consensus 264 gLIVydl~~~~swRv~ 279 (295)
.|.+||+++++..+..
T Consensus 139 ~i~iwd~~~~~~~~~~ 154 (366)
T 3k26_A 139 ALRLWNIQTDTLVAIF 154 (366)
T ss_dssp CEEEEETTTTEEEEEE
T ss_pred eEEEEEeecCeEEEEe
Confidence 7999999998877764
No 180
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=38.25 E-value=99 Score=27.23 Aligned_cols=59 Identities=19% Similarity=0.200 Sum_probs=38.8
Q ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELA 262 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~ 262 (295)
-.|.+||+++++.++++.-+.. ...+..+++.. ++.++..+.. +
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~~h-------------------------------~~~v~~~~~s~----~~~~l~s~~~-d 235 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENSPR-------------------------------HGAVSSICIDE----ECCVLILGTT-R 235 (437)
T ss_dssp SEEEEEETTTCCEEEEEECCGG-------------------------------GCCEEEEEECT----TSCEEEEEET-T
T ss_pred CeEEEEeCCCCeeeEEEccCCC-------------------------------CCceEEEEECC----CCCEEEEEcC-C
Confidence 4689999999999998887532 02456666653 1344444433 3
Q ss_pred CeEEEEEcCCCeEEE
Q psy13477 263 YGLLSYSWEENTSWR 277 (295)
Q Consensus 263 ~gLIVydl~~~~swR 277 (295)
+.|.+||+++++.-+
T Consensus 236 g~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 236 GIIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEETTTTEEEE
T ss_pred CeEEEEEcCCccEEE
Confidence 468888888877655
No 181
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=36.73 E-value=1.7e+02 Score=23.90 Aligned_cols=58 Identities=21% Similarity=0.316 Sum_probs=35.8
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
.|.+||+++++.++++.-... .+..+.+.. ++.+++.+. ..+
T Consensus 164 ~v~~~d~~~~~~~~~~~~~~~---------------------------------~i~~~~~~~----~~~~l~~~~-~dg 205 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQGHTD---------------------------------GASCIDISN----DGTKLWTGG-LDN 205 (337)
T ss_dssp CEEEEETTTTEEEEEECCCSS---------------------------------CEEEEEECT----TSSEEEEEE-TTS
T ss_pred cEEEEeCCCCceeeeeecccC---------------------------------ceEEEEECC----CCCEEEEEe-cCC
Confidence 477888888887776643222 355666653 234444443 345
Q ss_pred eEEEEEcCCCeEEEEe
Q psy13477 264 GLLSYSWEENTSWRAS 279 (295)
Q Consensus 264 gLIVydl~~~~swRv~ 279 (295)
.|.+||+++++.-+..
T Consensus 206 ~i~~~d~~~~~~~~~~ 221 (337)
T 1gxr_A 206 TVRSWDLREGRQLQQH 221 (337)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred cEEEEECCCCceEeee
Confidence 7889999888765543
No 182
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=35.65 E-value=55 Score=28.27 Aligned_cols=20 Identities=15% Similarity=0.439 Sum_probs=16.0
Q ss_pred eEEEEECCCCcEEEEEEcCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRP 203 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~ 203 (295)
.|.+||+++++.++++..+.
T Consensus 189 ~v~iwd~~~~~~~~~~~~~~ 208 (416)
T 2pm9_A 189 FASIWDLKAKKEVIHLSYTS 208 (416)
T ss_dssp CEEEEETTTTEEEEEECCCC
T ss_pred CEEEEECCCCCcceEEeccc
Confidence 48889999988888877764
No 183
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=34.95 E-value=99 Score=26.62 Aligned_cols=32 Identities=9% Similarity=0.000 Sum_probs=18.6
Q ss_pred ceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCe
Q psy13477 239 IANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENT 274 (295)
Q Consensus 239 l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~ 274 (295)
+..+++... +...+++=..++.|.+||+.+++
T Consensus 308 v~~~~~s~~----~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 308 CFKTKFAPE----APDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp CCCEEECTT----CTTEEEECCSSSEEEEEESCCCC
T ss_pred eEEEEECCC----CCCEEEEEecCCcEEEEEccCCC
Confidence 445555531 21344444445679999998775
No 184
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=34.76 E-value=2e+02 Score=23.93 Aligned_cols=79 Identities=5% Similarity=0.115 Sum_probs=47.3
Q ss_pred EEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCC
Q psy13477 151 TTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRP 230 (295)
Q Consensus 151 sV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~ 230 (295)
.|..+...+++++.+. |.- .-.|.+||+++++.++++.-...
T Consensus 67 ~v~~~~~~~~~~~l~s--~~~----------d~~i~vwd~~~~~~~~~~~~~~~-------------------------- 108 (312)
T 4ery_A 67 GISDVAWSSDSNLLVS--ASD----------DKTLKIWDVSSGKCLKTLKGHSN-------------------------- 108 (312)
T ss_dssp CEEEEEECTTSSEEEE--EET----------TSEEEEEETTTCCEEEEEECCSS--------------------------
T ss_pred ceEEEEEcCCCCEEEE--ECC----------CCEEEEEECCCCcEEEEEcCCCC--------------------------
Confidence 3566777777765542 211 13688999999999887764443
Q ss_pred cccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 231 EDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 231 ~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
.+..+.+.. ++.+++.... ++.|.+||+++++.-+..
T Consensus 109 -------~v~~~~~~~----~~~~l~s~~~-d~~i~iwd~~~~~~~~~~ 145 (312)
T 4ery_A 109 -------YVFCCNFNP----QSNLIVSGSF-DESVRIWDVKTGKCLKTL 145 (312)
T ss_dssp -------CEEEEEECS----SSSEEEEEET-TSCEEEEETTTCCEEEEE
T ss_pred -------CEEEEEEcC----CCCEEEEEeC-CCcEEEEECCCCEEEEEe
Confidence 244445442 2334443332 346888998888765543
No 185
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=34.60 E-value=2.4e+02 Score=24.91 Aligned_cols=22 Identities=5% Similarity=-0.041 Sum_probs=14.9
Q ss_pred EcCCCCeEEEEEcCCCeEEEEe
Q psy13477 258 SDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 258 tD~~~~gLIVydl~~~~swRv~ 279 (295)
+-...+.|.|||+.+++--+..
T Consensus 339 sg~~d~~I~iwd~~~~~~v~~l 360 (420)
T 4gga_A 339 HGFAQNQLVIWKYPTMAKVAEL 360 (420)
T ss_dssp ECTTTCCEEEEETTTCCEEEEE
T ss_pred EecCCCEEEEEECCCCcEEEEE
Confidence 3334567888998888766544
No 186
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=34.57 E-value=1.4e+02 Score=24.90 Aligned_cols=36 Identities=6% Similarity=0.194 Sum_probs=22.3
Q ss_pred ceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 239 IANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 239 l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
+..++++. ++.++..+.. .+.|.+||+++++.-+..
T Consensus 195 ~~~~~~~~----~~~~l~~~~~-d~~i~iwd~~~~~~~~~~ 230 (312)
T 4ery_A 195 VSFVKFSP----NGKYILAATL-DNTLKLWDYSKGKCLKTY 230 (312)
T ss_dssp EEEEEECT----TSSEEEEEET-TTEEEEEETTTTEEEEEE
T ss_pred eEEEEECC----CCCEEEEEcC-CCeEEEEECCCCcEEEEE
Confidence 44555553 2345444433 457999999999876654
No 187
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=33.92 E-value=62 Score=28.68 Aligned_cols=17 Identities=29% Similarity=0.575 Sum_probs=13.7
Q ss_pred eEEEEECCCCcEEEEEE
Q psy13477 184 AIHVFDLKTDRRIRKYQ 200 (295)
Q Consensus 184 KLvvfDL~td~lir~y~ 200 (295)
.|.+||++++++++++.
T Consensus 150 ~i~iwd~~~~~~~~~~~ 166 (344)
T 4gqb_B 150 CIKVWDLAQQVVLSSYR 166 (344)
T ss_dssp CEEEEETTTTEEEEEEC
T ss_pred eEEEEECCCCcEEEEEc
Confidence 47889999998887764
No 188
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=33.82 E-value=81 Score=26.85 Aligned_cols=57 Identities=11% Similarity=0.062 Sum_probs=33.3
Q ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELA 262 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~ 262 (295)
-.|.+||+.+++.++++.-.. ..+..+++.. ++.+++.+. .+
T Consensus 314 ~~i~v~d~~~~~~~~~~~~~~---------------------------------~~v~~~~~s~----~~~~l~s~~-~d 355 (408)
T 4a11_B 314 STIAVYTVYSGEQITMLKGHY---------------------------------KTVDCCVFQS----NFQELYSGS-RD 355 (408)
T ss_dssp TEEEEEETTTCCEEEEECCCS---------------------------------SCEEEEEEET----TTTEEEEEE-TT
T ss_pred CEEEEEECcCCcceeeeccCC---------------------------------CeEEEEEEcC----CCCEEEEEC-CC
Confidence 357788888888877664322 2456677764 234444443 34
Q ss_pred CeEEEEEcCCCeEEE
Q psy13477 263 YGLLSYSWEENTSWR 277 (295)
Q Consensus 263 ~gLIVydl~~~~swR 277 (295)
+.|.+||+++++.-.
T Consensus 356 g~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 356 CNILAWVPSLYEPVP 370 (408)
T ss_dssp SCEEEEEECC-----
T ss_pred CeEEEEeCCCCCccC
Confidence 579999999887544
No 189
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=32.87 E-value=59 Score=28.66 Aligned_cols=18 Identities=6% Similarity=-0.014 Sum_probs=13.9
Q ss_pred CCeEEEEEcCCCeEEEEe
Q psy13477 262 AYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 262 ~~gLIVydl~~~~swRv~ 279 (295)
++.|.|||+++++.-+..
T Consensus 291 D~~i~iwd~~~~~~~~~~ 308 (357)
T 4g56_B 291 DCTVAVLDADFSEVFRDL 308 (357)
T ss_dssp TSCEEEECTTSCEEEEEC
T ss_pred CCEEEEEECCCCcEeEEC
Confidence 346889999998877765
No 190
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=32.82 E-value=1.8e+02 Score=24.78 Aligned_cols=20 Identities=10% Similarity=0.338 Sum_probs=16.1
Q ss_pred eEEEEECCCCcEEEEEEcCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRP 203 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~ 203 (295)
.|-+||+++++.++++.-..
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~ 107 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHK 107 (319)
T ss_dssp EEEEEETTTTEEEEEEECCS
T ss_pred EEEEEECCCCCeeEEEccCC
Confidence 68899999999988776433
No 191
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=32.37 E-value=2e+02 Score=23.38 Aligned_cols=17 Identities=6% Similarity=0.276 Sum_probs=13.3
Q ss_pred eEEEEECCCCcEEEEEE
Q psy13477 184 AIHVFDLKTDRRIRKYQ 200 (295)
Q Consensus 184 KLvvfDL~td~lir~y~ 200 (295)
.|.+||+.++++++++.
T Consensus 265 ~i~iwd~~~~~~~~~l~ 281 (318)
T 4ggc_A 265 QLVIWKYPTMAKVAELK 281 (318)
T ss_dssp CEEEEETTTCCEEEEEC
T ss_pred EEEEEECCCCcEEEEEc
Confidence 57888888888887653
No 192
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=32.33 E-value=1.2e+02 Score=25.90 Aligned_cols=18 Identities=11% Similarity=-0.025 Sum_probs=13.1
Q ss_pred CceEEEEECCCCcEEEEE
Q psy13477 182 PYAIHVFDLKTDRRIRKY 199 (295)
Q Consensus 182 ~pKLvvfDL~td~lir~y 199 (295)
...|.++|+.+++..+..
T Consensus 167 ~~~l~~~d~~~g~~~~~~ 184 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIH 184 (396)
T ss_dssp CEEEEEEETTTCCEEEEE
T ss_pred cceEEEEECCCCcEEeec
Confidence 357889999888765444
No 193
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=32.28 E-value=2.4e+02 Score=24.25 Aligned_cols=20 Identities=15% Similarity=0.375 Sum_probs=16.7
Q ss_pred eEEEEECCCCcEEEEEEcCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRP 203 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~ 203 (295)
.|.+||+++++.++++....
T Consensus 204 ~v~iwd~~~~~~~~~~~~~~ 223 (420)
T 3vl1_A 204 TIRLWECGTGTTIHTFNRKE 223 (420)
T ss_dssp CEEEEETTTTEEEEEECBTT
T ss_pred cEEEeECCCCceeEEeecCC
Confidence 58899999999998887654
No 194
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=31.38 E-value=2.7e+02 Score=24.39 Aligned_cols=58 Identities=10% Similarity=0.127 Sum_probs=35.8
Q ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEE-cCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYAS-DEL 261 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYIt-D~~ 261 (295)
-.|.+||+.+++.++.+.... -+..+++.. ++.+++.+ -..
T Consensus 284 ~~i~i~d~~~~~~~~~~~~~~----------------------------------~v~~~~~s~----~~~~l~~~~g~~ 325 (401)
T 4aez_A 284 KQIHFWNAATGARVNTVDAGS----------------------------------QVTSLIWSP----HSKEIMSTHGFP 325 (401)
T ss_dssp CEEEEEETTTCCEEEEEECSS----------------------------------CEEEEEECS----SSSEEEEEECTT
T ss_pred CEEEEEECCCCCEEEEEeCCC----------------------------------cEEEEEECC----CCCeEEEEeecC
Confidence 457777777777776665332 255556553 24455554 334
Q ss_pred CCeEEEEEcCCCeEEEE
Q psy13477 262 AYGLLSYSWEENTSWRA 278 (295)
Q Consensus 262 ~~gLIVydl~~~~swRv 278 (295)
.+.|.|||+.+++.-++
T Consensus 326 dg~i~v~~~~~~~~~~~ 342 (401)
T 4aez_A 326 DNNLSIWSYSSSGLTKQ 342 (401)
T ss_dssp TCEEEEEEEETTEEEEE
T ss_pred CCcEEEEecCCccceeE
Confidence 56899999988765554
No 195
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=31.37 E-value=2.4e+02 Score=23.89 Aligned_cols=36 Identities=19% Similarity=0.025 Sum_probs=22.7
Q ss_pred CceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 238 FIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 238 ~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
.+..+.+.. ++ .+++-...+.|.+||+++++.-+..
T Consensus 291 ~i~~~~~~~-----~~-~l~~~~~d~~i~i~d~~~~~~~~~~ 326 (425)
T 1r5m_A 291 SIVSASWVG-----DD-KVISCSMDGSVRLWSLKQNTLLALS 326 (425)
T ss_dssp CEEEEEEET-----TT-EEEEEETTSEEEEEETTTTEEEEEE
T ss_pred cEEEEEECC-----CC-EEEEEeCCCcEEEEECCCCcEeEec
Confidence 455666653 23 3344444568999999998866544
No 196
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=31.17 E-value=1.7e+02 Score=25.97 Aligned_cols=58 Identities=17% Similarity=0.165 Sum_probs=34.0
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCC--
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDEL-- 261 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~-- 261 (295)
.|.+||++++++++++..... -...+.+..+++.. ++.++..+...
T Consensus 383 ~v~iwd~~~~~~~~~~~~~~~----------------------------~~~~~~v~~~~~s~----~~~~la~~~~dg~ 430 (445)
T 2ovr_B 383 TVKLWDLKTGEFIRNLVTLES----------------------------GGSGGVVWRIRASN----TKLVCAVGSRNGT 430 (445)
T ss_dssp EEEEEETTTCCEEEEEEECTT----------------------------GGGTCEEEEEEECS----SEEEEEEECSSSS
T ss_pred eEEEEECCCCceeeeeecccc----------------------------CCCCceEEEEEecC----CEEEEEEcccCCC
Confidence 577788888887777754332 11234566777763 23444444332
Q ss_pred -CCeEEEEEcCCC
Q psy13477 262 -AYGLLSYSWEEN 273 (295)
Q Consensus 262 -~~gLIVydl~~~ 273 (295)
...|.|||++..
T Consensus 431 ~~~~l~v~df~~~ 443 (445)
T 2ovr_B 431 EETKLLVLDFDVD 443 (445)
T ss_dssp SCCEEEEEECCCC
T ss_pred CccEEEEEECCCC
Confidence 235999998764
No 197
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=31.11 E-value=47 Score=29.34 Aligned_cols=20 Identities=20% Similarity=0.522 Sum_probs=14.6
Q ss_pred eEEEEECCCCcEEEEEEcCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRP 203 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~ 203 (295)
.|.+||+++++.++.+.-..
T Consensus 162 ~v~iwd~~~~~~~~~~~~h~ 181 (357)
T 4g56_B 162 SVKVWDLSQKAVLKSYNAHS 181 (357)
T ss_dssp CEEEEETTTTEEEEEECCCS
T ss_pred eEEEEECCCCcEEEEEcCCC
Confidence 47788998888887765433
No 198
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=31.02 E-value=90 Score=25.91 Aligned_cols=22 Identities=9% Similarity=0.067 Sum_probs=15.3
Q ss_pred ceEEEEECCCCcEEEEEEcCCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPE 204 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~ 204 (295)
-.|.+||+.+.+.++.+.-...
T Consensus 237 g~i~iwd~~~~~~~~~~~~~~~ 258 (340)
T 4aow_A 237 GQAMLWDLNEGKHLYTLDGGDI 258 (340)
T ss_dssp CEEEEEETTTTEEEEEEECSSC
T ss_pred CeEEEEEeccCceeeeecCCce
Confidence 3678888888887776665443
No 199
>4fp5_D LT-IIB, heat-labIle enterotoxin IIB, B chain; B pentamer LT-IIB S74A mutant; 1.40A {Escherichia coli} PDB: 1qb5_D 1qcb_D 1tii_D 4fnf_D 4fo2_D
Probab=30.47 E-value=55 Score=25.40 Aligned_cols=33 Identities=30% Similarity=0.363 Sum_probs=25.0
Q ss_pred eEEEEEcCC--CCeEEEEEcCCCeEEEEecCCcccC
Q psy13477 253 TFLYASDEL--AYGLLSYSWEENTSWRASHGFFFPD 286 (295)
Q Consensus 253 ~~aYItD~~--~~gLIVydl~~~~swRv~h~~f~pd 286 (295)
-.-||+|.. ..|+.|++- +|--||+...-=+||
T Consensus 23 l~kyi~din~nt~g~yvvs~-tggvw~i~~~~dypd 57 (98)
T 4fp5_D 23 LTKYISDINNNTDGMYVVSS-TGGVWRISRAKDYPD 57 (98)
T ss_dssp EEEEEEECSTTTCEEEEEET-TCCEEEECCCSSTTH
T ss_pred hhhhhhhccCCCccEEEEec-CCcEEEecCCCCCCh
Confidence 457999996 479999986 555999986655554
No 200
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=30.35 E-value=99 Score=27.69 Aligned_cols=58 Identities=9% Similarity=0.178 Sum_probs=35.5
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
.|.+||+.+++.++++.-.. ..+..+++.. ++.+++. =..++
T Consensus 319 ~i~iwd~~~~~~~~~~~~h~---------------------------------~~v~~v~~~~----~g~~l~s-~s~D~ 360 (410)
T 1vyh_C 319 TIKMWDVSTGMCLMTLVGHD---------------------------------NWVRGVLFHS----GGKFILS-CADDK 360 (410)
T ss_dssp EEEEEETTTTEEEEEEECCS---------------------------------SCEEEEEECS----SSSCEEE-EETTT
T ss_pred eEEEEECCCCceEEEEECCC---------------------------------CcEEEEEEcC----CCCEEEE-EeCCC
Confidence 47788888888877664322 2355666653 1333333 23345
Q ss_pred eEEEEEcCCCeEEEEe
Q psy13477 264 GLLSYSWEENTSWRAS 279 (295)
Q Consensus 264 gLIVydl~~~~swRv~ 279 (295)
.|-|||+++++..+..
T Consensus 361 ~i~vwd~~~~~~~~~~ 376 (410)
T 1vyh_C 361 TLRVWDYKNKRCMKTL 376 (410)
T ss_dssp EEEEECCTTSCCCEEE
T ss_pred eEEEEECCCCceEEEE
Confidence 7888998887765544
No 201
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=29.92 E-value=2.9e+02 Score=24.42 Aligned_cols=21 Identities=19% Similarity=0.181 Sum_probs=15.3
Q ss_pred ceEEEEECCCCcEEEEEEcCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRP 203 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~ 203 (295)
-.|.+||+++++.++++.-..
T Consensus 276 g~i~vwd~~~~~~~~~~~~~~ 296 (435)
T 1p22_A 276 RTIKVWNTSTCEFVRTLNGHK 296 (435)
T ss_dssp SEEEEEETTTCCEEEEEECCS
T ss_pred CeEEEEECCcCcEEEEEcCCC
Confidence 467888888888887776433
No 202
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=29.90 E-value=1.5e+02 Score=25.51 Aligned_cols=59 Identities=8% Similarity=0.138 Sum_probs=35.5
Q ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELA 262 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~ 262 (295)
-.|.+||+++++.++++.-... .+..+++... +. .+++=..+
T Consensus 164 ~~i~~wd~~~~~~~~~~~~h~~---------------------------------~v~~~~~~~~----~~-~l~sg~~d 205 (340)
T 1got_B 164 TTCALWDIETGQQTTTFTGHTG---------------------------------DVMSLSLAPD----TR-LFVSGACD 205 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSS---------------------------------CEEEEEECTT----SS-EEEEEETT
T ss_pred CcEEEEECCCCcEEEEEcCCCC---------------------------------ceEEEEECCC----CC-EEEEEeCC
Confidence 3588899999988876542221 2445555431 22 33333345
Q ss_pred CeEEEEEcCCCeEEEEe
Q psy13477 263 YGLLSYSWEENTSWRAS 279 (295)
Q Consensus 263 ~gLIVydl~~~~swRv~ 279 (295)
+.+.+||+++++.-+..
T Consensus 206 ~~v~~wd~~~~~~~~~~ 222 (340)
T 1got_B 206 ASAKLWDVREGMCRQTF 222 (340)
T ss_dssp SCEEEEETTTCSEEEEE
T ss_pred CcEEEEECCCCeeEEEE
Confidence 57888998888765543
No 203
>1qb5_D Protein (heat labIle enterotoxin type IIB B- pentamer); 1.90A {Escherichia coli} SCOP: b.40.2.1 PDB: 1qcb_D 1tii_D
Probab=29.67 E-value=57 Score=25.38 Aligned_cols=33 Identities=30% Similarity=0.363 Sum_probs=25.2
Q ss_pred eEEEEEcCC--CCeEEEEEcCCCeEEEEecCCcccC
Q psy13477 253 TFLYASDEL--AYGLLSYSWEENTSWRASHGFFFPD 286 (295)
Q Consensus 253 ~~aYItD~~--~~gLIVydl~~~~swRv~h~~f~pd 286 (295)
-.-||+|.. ..|+.|++- +|--||+...-=+||
T Consensus 23 l~kyi~din~nt~g~yvvs~-tggvw~i~~~~dypd 57 (99)
T 1qb5_D 23 LTKYISDINNNTDGMYVVSS-TGGVWRISRAKDYPD 57 (99)
T ss_dssp EEEEEEECSTTTCEEEEEET-TSCEEEECCCSSTTH
T ss_pred hhhhhhhccCCCccEEEEec-CCcEEEecCCCCCCh
Confidence 457999996 479999986 555999986655554
No 204
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=29.63 E-value=1.5e+02 Score=25.87 Aligned_cols=19 Identities=11% Similarity=0.392 Sum_probs=13.5
Q ss_pred ceEEEEECCCCcEEEEEEc
Q psy13477 183 YAIHVFDLKTDRRIRKYQF 201 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~ 201 (295)
-+|.+||+++++.++.+.-
T Consensus 220 g~v~~wd~~~~~~~~~~~~ 238 (354)
T 2pbi_B 220 KKAMVWDMRSGQCVQAFET 238 (354)
T ss_dssp SCEEEEETTTCCEEEEECC
T ss_pred CeEEEEECCCCcEEEEecC
Confidence 3577888888887776543
No 205
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=29.51 E-value=1.2e+02 Score=25.96 Aligned_cols=54 Identities=13% Similarity=0.026 Sum_probs=0.0
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
.|.+||+.+++.++.+..... ..+..+++.. ++-..++=..++
T Consensus 150 ~i~~wd~~~~~~~~~~~~~~~--------------------------------~~i~~~~~~p-----dg~~lasg~~dg 192 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAKSD--------------------------------VEYSSGVLHK-----DSLLLALYSPDG 192 (343)
T ss_dssp CEEEEESSSSCEEEEECCCSS--------------------------------CCCCEEEECT-----TSCEEEEECTTS
T ss_pred cEEEEECCCCcEEEEEecCCC--------------------------------CceEEEEECC-----CCCEEEEEcCCC
Q ss_pred eEEEEEcCCCe
Q psy13477 264 GLLSYSWEENT 274 (295)
Q Consensus 264 gLIVydl~~~~ 274 (295)
.|.+||+++++
T Consensus 193 ~i~iwd~~~~~ 203 (343)
T 3lrv_A 193 ILDVYNLSSPD 203 (343)
T ss_dssp CEEEEESSCTT
T ss_pred EEEEEECCCCC
No 206
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=29.21 E-value=2.6e+02 Score=23.69 Aligned_cols=56 Identities=14% Similarity=0.229 Sum_probs=35.8
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
.|.+||+.+.+.++++..... +..+++.. ++.++..+.. .
T Consensus 219 ~i~iwd~~~~~~~~~~~~~~~----------------------------------v~~~~~sp----~~~~la~~~~--~ 258 (319)
T 3frx_A 219 EIMLWNLAAKKAMYTLSAQDE----------------------------------VFSLAFSP----NRYWLAAATA--T 258 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSC----------------------------------EEEEEECS----SSSEEEEEET--T
T ss_pred eEEEEECCCCcEEEEecCCCc----------------------------------EEEEEEcC----CCCEEEEEcC--C
Confidence 577888888888777664332 44555553 2344444443 4
Q ss_pred eEEEEEcCCCeEEEEe
Q psy13477 264 GLLSYSWEENTSWRAS 279 (295)
Q Consensus 264 gLIVydl~~~~swRv~ 279 (295)
++.||++..+...+..
T Consensus 259 ~i~v~~~~~~~~~~~~ 274 (319)
T 3frx_A 259 GIKVFSLDPQYLVDDL 274 (319)
T ss_dssp EEEEEEETTEEEEEEE
T ss_pred CcEEEEeCcCeeeecc
Confidence 7999999887766544
No 207
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=29.13 E-value=1.8e+02 Score=25.80 Aligned_cols=18 Identities=11% Similarity=0.178 Sum_probs=13.5
Q ss_pred ceEEEEECCCCcEEEEEE
Q psy13477 183 YAIHVFDLKTDRRIRKYQ 200 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~ 200 (295)
-.|.+||+.+++.++++.
T Consensus 290 ~~i~vwd~~~~~~~~~~~ 307 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYILS 307 (464)
T ss_dssp SCEEEEETTTTEEEEEEC
T ss_pred CeEEEEECCCCcEEEEec
Confidence 358888888888877664
No 208
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=28.56 E-value=1.6e+02 Score=24.92 Aligned_cols=21 Identities=19% Similarity=0.395 Sum_probs=18.1
Q ss_pred eEEEEECCCCcEEEEEEcCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPE 204 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~ 204 (295)
.|.+||+.+++.++.+.++..
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~ 143 (408)
T 4a11_B 123 TLKVWDTNTLQTADVFNFEET 143 (408)
T ss_dssp EEEEEETTTTEEEEEEECSSC
T ss_pred eEEEeeCCCCccceeccCCCc
Confidence 689999999999999987654
No 209
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=28.26 E-value=2.4e+02 Score=23.54 Aligned_cols=74 Identities=3% Similarity=0.034 Sum_probs=44.2
Q ss_pred EeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCc--EEEEEEcCCCCCCCCceeeeeecchhhhhccccCC
Q psy13477 152 TYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDR--RIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFR 229 (295)
Q Consensus 152 V~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~--lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~ 229 (295)
|..+...+++++-+. |.. .-.|.+||+.+++ .++++.-...
T Consensus 11 i~~~~~s~~~~~l~~--~~~----------d~~v~i~~~~~~~~~~~~~~~~h~~------------------------- 53 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAI--CPN----------NHEVHIYEKSGNKWVQVHELKEHNG------------------------- 53 (372)
T ss_dssp CCEEEECTTSSEEEE--ECS----------SSEEEEEEEETTEEEEEEEEECCSS-------------------------
T ss_pred eEEEEECCCCCEEEE--EeC----------CCEEEEEeCCCCcEEeeeeecCCCC-------------------------
Confidence 455666677765543 111 2369999999998 6666553222
Q ss_pred CcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeE
Q psy13477 230 PEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTS 275 (295)
Q Consensus 230 ~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~s 275 (295)
.+..+++.. ++.+++.+. .++.|.+||+++++.
T Consensus 54 --------~v~~~~~~~----~~~~l~~~~-~dg~i~vwd~~~~~~ 86 (372)
T 1k8k_C 54 --------QVTGVDWAP----DSNRIVTCG-TDRNAYVWTLKGRTW 86 (372)
T ss_dssp --------CEEEEEEET----TTTEEEEEE-TTSCEEEEEEETTEE
T ss_pred --------cccEEEEeC----CCCEEEEEc-CCCeEEEEECCCCee
Confidence 356666663 234444443 235688888888863
No 210
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=28.02 E-value=2.2e+02 Score=25.12 Aligned_cols=19 Identities=16% Similarity=0.387 Sum_probs=12.9
Q ss_pred eEEEEECCCCcEEEEEEcC
Q psy13477 184 AIHVFDLKTDRRIRKYQFR 202 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p 202 (295)
.+.+||+++++.+.++...
T Consensus 188 ~v~iwd~~~~~~~~~~~~~ 206 (393)
T 1erj_A 188 TVRIWDLRTGQCSLTLSIE 206 (393)
T ss_dssp EEEEEETTTTEEEEEEECS
T ss_pred cEEEEECCCCeeEEEEEcC
Confidence 5677788777776666543
No 211
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=27.81 E-value=2.5e+02 Score=24.02 Aligned_cols=21 Identities=24% Similarity=0.529 Sum_probs=17.7
Q ss_pred eEEEEECCCCcEEEEEEcCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPE 204 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~ 204 (295)
.|.+||+.+++.++++...+.
T Consensus 103 ~i~lWd~~~~~~~~~~~~~~~ 123 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAGPV 123 (321)
T ss_dssp EEEEEETTTTEEEEEEECCTT
T ss_pred cEEEEECCCCCEEEEEeCCCc
Confidence 688999999999998876554
No 212
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=27.17 E-value=19 Score=31.34 Aligned_cols=30 Identities=43% Similarity=0.705 Sum_probs=20.2
Q ss_pred CCchhhhhhHHHHHHhhh--------------cccceEeecccc
Q psy13477 4 MSSRSQMSRLEAFIVRLT--------------NLSGVVVDFGSG 33 (295)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~ 33 (295)
|+.-+|||||+-||.|++ -+.+-|.++|-|
T Consensus 7 ~~~~~~mSRLDsfirRltaQR~~L~~a~~~v~~~~GpVlElGLG 50 (174)
T 3iht_A 7 IMSQPEQSRLDLFIDRMVSQRACLEHAIAQTAGLSGPVYELGLG 50 (174)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHHHHHHHTTTCCSCEEEECCT
T ss_pred ccCccchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEecCC
Confidence 667899999999998873 467788888844
No 213
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=27.04 E-value=3e+02 Score=23.84 Aligned_cols=20 Identities=5% Similarity=0.288 Sum_probs=15.4
Q ss_pred eEEEEECCCCcEEEEEEcCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRP 203 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~ 203 (295)
.|.+||+.++++++++.-..
T Consensus 177 ~v~lwd~~~~~~~~~~~~h~ 196 (354)
T 2pbi_B 177 TCALWDVESGQLLQSFHGHG 196 (354)
T ss_dssp EEEEEETTTCCEEEEEECCS
T ss_pred cEEEEeCCCCeEEEEEcCCC
Confidence 57889999999888776433
No 214
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=26.87 E-value=2.7e+02 Score=23.04 Aligned_cols=67 Identities=9% Similarity=-0.021 Sum_probs=40.5
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
+|.+||+.+++.++.+.--.. ......+..++.......++.+++.+.. ++
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~----------------------------~~~~~~v~~~~~~~~~~~~~~~l~~~~~-dg 95 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVD----------------------------ADADENFYTCAWTYDSNTSHPLLAVAGS-RG 95 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEEC----------------------------SCTTCCEEEEEEEECTTTCCEEEEEEET-TC
T ss_pred EEEEEEcCCCcEEEeeeeccc----------------------------cCCCCcEEEEEeccCCCCCCCEEEEecC-CC
Confidence 699999999887766653221 0112346666665432112345555543 45
Q ss_pred eEEEEEcCCCeEEEEe
Q psy13477 264 GLLSYSWEENTSWRAS 279 (295)
Q Consensus 264 gLIVydl~~~~swRv~ 279 (295)
.|.+||+.+++.-+..
T Consensus 96 ~i~v~d~~~~~~~~~~ 111 (366)
T 3k26_A 96 IIRIINPITMQCIKHY 111 (366)
T ss_dssp EEEEECTTTCCEEEEE
T ss_pred EEEEEEchhceEeeee
Confidence 7999999988776544
No 215
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=26.70 E-value=2.5e+02 Score=24.84 Aligned_cols=57 Identities=7% Similarity=0.008 Sum_probs=36.5
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
.|.+||+++++.++++.-... .+..++... ++++..+ ..++
T Consensus 143 ~i~vwd~~~~~~~~~~~~h~~---------------------------------~V~~l~~~~-----~~~l~s~-s~dg 183 (464)
T 3v7d_B 143 MIRVYDSINKKFLLQLSGHDG---------------------------------GVWALKYAH-----GGILVSG-STDR 183 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSS---------------------------------CEEEEEECS-----TTEEEEE-ETTS
T ss_pred cEEEEECCCCcEEEEEeCCCc---------------------------------CEEEEEEcC-----CCEEEEE-eCCC
Confidence 588999999998887652222 345555531 2333333 3345
Q ss_pred eEEEEEcCCCeEEEEe
Q psy13477 264 GLLSYSWEENTSWRAS 279 (295)
Q Consensus 264 gLIVydl~~~~swRv~ 279 (295)
.|.|||+++++.-+..
T Consensus 184 ~i~vwd~~~~~~~~~~ 199 (464)
T 3v7d_B 184 TVRVWDIKKGCCTHVF 199 (464)
T ss_dssp CEEEEETTTTEEEEEE
T ss_pred CEEEEECCCCcEEEEE
Confidence 7889999988766554
No 216
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=26.24 E-value=75 Score=27.15 Aligned_cols=32 Identities=6% Similarity=-0.137 Sum_probs=19.6
Q ss_pred CceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCe
Q psy13477 238 FIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENT 274 (295)
Q Consensus 238 ~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~ 274 (295)
.+..+++.. ++.+++.+.. .+.|.+||+.+++
T Consensus 332 ~i~~~~~s~----~~~~l~~~~~-dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 332 PIFAGRISQ----DGQKYAVAFM-DGQVNVYDLKKLN 363 (425)
T ss_dssp CEEEEEECT----TSSEEEEEET-TSCEEEEECHHHH
T ss_pred cEEEEEEcC----CCCEEEEEEC-CCeEEEEECCCCc
Confidence 355566653 2345554443 4579999998877
No 217
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=26.19 E-value=2.6e+02 Score=23.52 Aligned_cols=19 Identities=5% Similarity=-0.202 Sum_probs=13.7
Q ss_pred CCCeEEEEEcCCCeEEEEe
Q psy13477 261 LAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 261 ~~~gLIVydl~~~~swRv~ 279 (295)
.++.|-+||.++++.-+..
T Consensus 248 ~Dg~i~iWd~~~~~~~~~~ 266 (304)
T 2ynn_A 248 EDGTLKIWNSSTYKVEKTL 266 (304)
T ss_dssp TTSCEEEEETTTCCEEEEE
T ss_pred CCCeEEEEECCCCceeeec
Confidence 3457888998888766554
No 218
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=25.88 E-value=1.5e+02 Score=24.61 Aligned_cols=18 Identities=22% Similarity=0.302 Sum_probs=12.0
Q ss_pred eEEEEECCCCcEEEEEEc
Q psy13477 184 AIHVFDLKTDRRIRKYQF 201 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~ 201 (295)
.|.+||+++++++.....
T Consensus 191 ~i~i~d~~~~~~~~~~~~ 208 (357)
T 3i2n_A 191 DIKLFDLRNMALRWETNI 208 (357)
T ss_dssp EEEEEETTTTEEEEEEEC
T ss_pred eEEEEECccCceeeecCC
Confidence 677788887776555443
No 219
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=25.34 E-value=2.6e+02 Score=24.97 Aligned_cols=33 Identities=6% Similarity=0.101 Sum_probs=20.9
Q ss_pred CCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCC
Q psy13477 237 TFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEEN 273 (295)
Q Consensus 237 S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~ 273 (295)
+.++.|.+.. .+.+++++=...+.|.+||+++.
T Consensus 278 ~~v~~i~~~p----~~~~~l~tg~~dg~v~vwd~~~~ 310 (430)
T 2xyi_A 278 AEVNCLSFNP----YSEFILATGSADKTVALWDLRNL 310 (430)
T ss_dssp SCEEEEEECS----SCTTEEEEEETTSEEEEEETTCT
T ss_pred CCeEEEEeCC----CCCCEEEEEeCCCeEEEEeCCCC
Confidence 3466666653 23455655555667999999873
No 220
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=25.24 E-value=2.9e+02 Score=26.18 Aligned_cols=86 Identities=3% Similarity=0.016 Sum_probs=49.8
Q ss_pred EeEEEEcCCCcEEEEe--CCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCC
Q psy13477 152 TYRIKADSCDRLWVLD--SGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFR 229 (295)
Q Consensus 152 V~~i~iD~c~rLWVLD--tG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~ 229 (295)
|..+.+.++|+.-+.= .+... .......|.+||+.+++. ++ +...
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~-----~~~~~~~i~~~d~~~~~~-~~--l~~~------------------------- 109 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIY-----QHSYTGYYVLSKIPHGDP-QS--LDPP------------------------- 109 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCS-----SSCCCSEEEEEESSSCCC-EE--CCCT-------------------------
T ss_pred cceEEECCCCCEEEEEecCccce-----eecceeeEEEEECCCCce-Ee--ccCC-------------------------
Confidence 5566777777744332 22211 112346899999999986 32 3221
Q ss_pred CcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 230 PEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 230 ~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
......+..+++.. .++..||.++ ..|.++|+.+++..++.
T Consensus 110 ---~~~~~~~~~~~~SP---dG~~la~~~~---~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 110 ---EVSNAKLQYAGWGP---KGQQLIFIFE---NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp ---TCCSCCCSBCCBCS---STTCEEEEET---TEEEEESSSSSCCEEEE
T ss_pred ---ccccccccccEECC---CCCEEEEEEC---CeEEEEECCCCceEEEe
Confidence 00111233333332 1357888887 48999999999888876
No 221
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=24.82 E-value=2.8e+02 Score=26.29 Aligned_cols=76 Identities=9% Similarity=0.075 Sum_probs=46.4
Q ss_pred EEEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCC
Q psy13477 150 TTTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFR 229 (295)
Q Consensus 150 vsV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~ 229 (295)
.+|..+.+.++++|-+- .+ ..|.+||+.++++.+....+.
T Consensus 82 ~~v~~~~~spd~~~~~~-~~-------------~~i~~~d~~~~~~~~l~~~~~-------------------------- 121 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQ-------------GGLVGFDMLARKVTYLFDTNE-------------------------- 121 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ET-------------TEEEEEETTTTEEEEEECCTT--------------------------
T ss_pred cCceeEEECCCCeEEEE-EC-------------CEEEEEECCCCceEEccCCcc--------------------------
Confidence 34666777766443332 11 369999999987754332211
Q ss_pred CcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCC-----CeEEEEe
Q psy13477 230 PEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEE-----NTSWRAS 279 (295)
Q Consensus 230 ~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~-----~~swRv~ 279 (295)
.+.++++... ++..||..| ..|.++|+.+ ++..++.
T Consensus 122 --------~~~~~~~Spd---G~~la~~~~---~~i~v~~~~~~~~~~g~~~~~~ 162 (706)
T 2z3z_A 122 --------ETASLDFSPV---GDRVAYVRN---HNLYIARGGKLGEGMSRAIAVT 162 (706)
T ss_dssp --------CCTTCEECTT---SSEEEEEET---TEEEEEECBCTTSCCCCCEESC
T ss_pred --------cccCCcCCCC---CCEEEEEEC---CeEEEEecCcccccCCCcEEec
Confidence 1344555431 345677654 5899999999 8877755
No 222
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=24.58 E-value=3.5e+02 Score=23.57 Aligned_cols=65 Identities=12% Similarity=0.189 Sum_probs=40.7
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
.|-+||+++++.++.+...... .......+..+++.. ++.+++... .++
T Consensus 272 ~i~lwd~~~~~~~~~~~~~~~~--------------------------~~~~~~~v~~~~~s~----~g~~l~~g~-~dg 320 (380)
T 3iz6_a 272 TCRLFDMRTGHQLQVYNREPDR--------------------------NDNELPIVTSVAFSI----SGRLLFAGY-SNG 320 (380)
T ss_dssp CEEEEETTTTEEEEEECCCCSS--------------------------SCCSSCSCSEEEECS----SSSEEEEEC-TTS
T ss_pred eEEEEECCCCcEEEEecccccc--------------------------cccccCceEEEEECC----CCCEEEEEE-CCC
Confidence 5778999999888887765530 001112355666654 245565553 356
Q ss_pred eEEEEEcCCCeEEEEe
Q psy13477 264 GLLSYSWEENTSWRAS 279 (295)
Q Consensus 264 gLIVydl~~~~swRv~ 279 (295)
.|.+||..+++.-+..
T Consensus 321 ~i~vwd~~~~~~~~~~ 336 (380)
T 3iz6_a 321 DCYVWDTLLAEMVLNL 336 (380)
T ss_dssp CEEEEETTTCCEEEEE
T ss_pred CEEEEECCCCceEEEE
Confidence 7999999888765543
No 223
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=24.37 E-value=3.2e+02 Score=23.64 Aligned_cols=81 Identities=12% Similarity=0.072 Sum_probs=48.2
Q ss_pred EeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECC-CCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCC
Q psy13477 152 TYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLK-TDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRP 230 (295)
Q Consensus 152 V~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~-td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~ 230 (295)
|..+...+++++.+. | -+ -.|.+||+. +++.++.+.+.+..
T Consensus 180 v~~~~~~~~~~~l~s--~-~d----------~~i~iwd~~~~~~~~~~~~~~~~~------------------------- 221 (447)
T 3dw8_B 180 INSISINSDYETYLS--A-DD----------LRINLWHLEITDRSFNIVDIKPAN------------------------- 221 (447)
T ss_dssp CCEEEECTTSSEEEE--E-CS----------SEEEEEETTEEEEEEEEEECCCSS-------------------------
T ss_pred eEEEEEcCCCCEEEE--e-CC----------CeEEEEECCCCCceeeeeeccccc-------------------------
Confidence 455666666665553 3 12 368999999 56677777776641
Q ss_pred cccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeE
Q psy13477 231 EDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTS 275 (295)
Q Consensus 231 ~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~s 275 (295)
.......+..+++... +..+++.+. .++.|.+||+++++.
T Consensus 222 -~~~~~~~v~~~~~~p~---~~~~l~s~~-~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 222 -MEELTEVITAAEFHPN---SCNTFVYSS-SKGTIRLCDMRASAL 261 (447)
T ss_dssp -GGGCCCCEEEEEECSS---CTTEEEEEE-TTSCEEEEETTTCSS
T ss_pred -ccccCcceEEEEECCC---CCcEEEEEe-CCCeEEEEECcCCcc
Confidence 1122345677777642 112333332 245799999999874
No 224
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=24.23 E-value=1.8e+02 Score=29.88 Aligned_cols=53 Identities=11% Similarity=0.191 Sum_probs=37.6
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
.|.+||++++++++++..+. .+..++++. ++.++++.+. .+
T Consensus 80 ~v~lWd~~~~~~~~~~~~~~----------------------------------~V~~v~~sp----~g~~l~sgs~-dg 120 (902)
T 2oaj_A 80 TVYVLSLYSQKVLTTVFVPG----------------------------------KITSIDTDA----SLDWMLIGLQ-NG 120 (902)
T ss_dssp EEEEEETTTCSEEEEEECSS----------------------------------CEEEEECCT----TCSEEEEEET-TS
T ss_pred eEEEEECCCCcEEEEEcCCC----------------------------------CEEEEEECC----CCCEEEEEcC-CC
Confidence 68999999999998886432 244555553 3567777654 45
Q ss_pred eEEEEEcCCCeE
Q psy13477 264 GLLSYSWEENTS 275 (295)
Q Consensus 264 gLIVydl~~~~s 275 (295)
.|.+||+++++.
T Consensus 121 ~V~lwd~~~~~~ 132 (902)
T 2oaj_A 121 SMIVYDIDRDQL 132 (902)
T ss_dssp CEEEEETTTTEE
T ss_pred cEEEEECCCCcc
Confidence 789999988874
No 225
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=24.14 E-value=2.5e+02 Score=23.99 Aligned_cols=16 Identities=25% Similarity=0.179 Sum_probs=12.4
Q ss_pred ceEEEEECCCCcEEEE
Q psy13477 183 YAIHVFDLKTDRRIRK 198 (295)
Q Consensus 183 pKLvvfDL~td~lir~ 198 (295)
..|.++|+.++++.+.
T Consensus 168 ~~l~~~d~~~g~~~~l 183 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVI 183 (388)
T ss_dssp EEEEEEETTTCCEEEE
T ss_pred ceEEEEECCCCceEEe
Confidence 5799999999876443
No 226
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=24.09 E-value=2.7e+02 Score=22.90 Aligned_cols=17 Identities=12% Similarity=0.149 Sum_probs=12.2
Q ss_pred eEEEEECCCCcEEEEEE
Q psy13477 184 AIHVFDLKTDRRIRKYQ 200 (295)
Q Consensus 184 KLvvfDL~td~lir~y~ 200 (295)
.|.+||+.++++++++.
T Consensus 196 ~i~i~d~~~~~~~~~~~ 212 (340)
T 4aow_A 196 LVKVWNLANCKLKTNHI 212 (340)
T ss_dssp CEEEEETTTTEEEEEEC
T ss_pred EEEEEECCCCceeeEec
Confidence 46778888887776654
No 227
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=24.04 E-value=2.8e+02 Score=24.37 Aligned_cols=73 Identities=16% Similarity=0.084 Sum_probs=0.0
Q ss_pred EeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCc
Q psy13477 152 TYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPE 231 (295)
Q Consensus 152 V~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~ 231 (295)
|..+.+.++|++-+ +|..+. .|.+||++++++++++.=...
T Consensus 272 V~~~~~Spdg~~la--sgs~D~----------~V~iwd~~~~~~~~~~~~gH~--------------------------- 312 (365)
T 4h5i_A 272 ITSMDVDMKGELAV--LASNDN----------SIALVKLKDLSMSKIFKQAHS--------------------------- 312 (365)
T ss_dssp EEEEEECTTSCEEE--EEETTS----------CEEEEETTTTEEEEEETTSSS---------------------------
T ss_pred eEeEEECCCCCceE--EEcCCC----------EEEEEECCCCcEEEEecCccc---------------------------
Q ss_pred ccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCC
Q psy13477 232 DILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEEN 273 (295)
Q Consensus 232 ~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~ 273 (295)
..+..+++-. ++-..+|=+.+..|-|||+.++
T Consensus 313 -----~~V~~v~fSp-----dg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 313 -----FAITEVTISP-----DSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp -----SCEEEEEECT-----TSCEEEEEETTSEEEEEECCTT
T ss_pred -----CCEEEEEECC-----CCCEEEEEeCCCeEEEEEcCCC
No 228
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=23.60 E-value=1.6e+02 Score=28.69 Aligned_cols=16 Identities=0% Similarity=-0.284 Sum_probs=12.3
Q ss_pred cCCCCeEEEEEcCCCe
Q psy13477 259 DELAYGLLSYSWEENT 274 (295)
Q Consensus 259 D~~~~gLIVydl~~~~ 274 (295)
......|..||+++++
T Consensus 401 ~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 401 FLSPGIIYHCDLTKEE 416 (710)
T ss_dssp SSCCCEEEEEETTSSS
T ss_pred CCCCCEEEEEECCCCc
Confidence 3345679999999987
No 229
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=23.49 E-value=2.8e+02 Score=24.63 Aligned_cols=59 Identities=10% Similarity=0.152 Sum_probs=34.7
Q ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCC
Q psy13477 183 YAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELA 262 (295)
Q Consensus 183 pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~ 262 (295)
..|.+||+.+++.++++.-... .+..+.... ++.++ ++=..+
T Consensus 214 ~~i~~wd~~~~~~~~~~~~h~~---------------------------------~v~~~~~~~----~g~~l-~s~s~D 255 (410)
T 1vyh_C 214 KTIKMWEVQTGYCVKTFTGHRE---------------------------------WVRMVRPNQ----DGTLI-ASCSND 255 (410)
T ss_dssp SEEEEEETTTCCEEEEEECCSS---------------------------------CEEEEEECT----TSSEE-EEEETT
T ss_pred CeEEEEECCCCcEEEEEeCCCc---------------------------------cEEEEEECC----CCCEE-EEEcCC
Confidence 3577888888887776653332 344444442 12333 333334
Q ss_pred CeEEEEEcCCCeEEEEe
Q psy13477 263 YGLLSYSWEENTSWRAS 279 (295)
Q Consensus 263 ~gLIVydl~~~~swRv~ 279 (295)
+.+.+||+.+++.-...
T Consensus 256 ~~v~vwd~~~~~~~~~~ 272 (410)
T 1vyh_C 256 QTVRVWVVATKECKAEL 272 (410)
T ss_dssp SCEEEEETTTCCEEEEE
T ss_pred CeEEEEECCCCceeeEe
Confidence 67999999988765544
No 230
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=23.49 E-value=4e+02 Score=23.87 Aligned_cols=28 Identities=11% Similarity=0.139 Sum_probs=19.4
Q ss_pred CeEEEEEcC-CCCeEEEEEcCCCeEEEEe
Q psy13477 252 DTFLYASDE-LAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 252 ~~~aYItD~-~~~gLIVydl~~~~swRv~ 279 (295)
...+|.++. +...|.+||+.+++..++.
T Consensus 279 ~~l~~~s~~~g~~~i~~~d~~~~~~~~l~ 307 (415)
T 2hqs_A 279 QNLAFTSDQAGRPQVYKVNINGGAPQRIT 307 (415)
T ss_dssp SEEEEEECTTSSCEEEEEETTSSCCEECC
T ss_pred CEEEEEECCCCCcEEEEEECCCCCEEEEe
Confidence 345666653 4567899999988866654
No 231
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=23.20 E-value=1.2e+02 Score=28.14 Aligned_cols=24 Identities=25% Similarity=0.224 Sum_probs=16.7
Q ss_pred CCCCCCceeeeEEeC---C--cEEEEecc
Q psy13477 80 FVPENNLPVGIEVWR---N--KLFVTVPR 103 (295)
Q Consensus 80 Yip~n~~p~gi~v~~---g--RiFvT~PR 103 (295)
+.+...-|.||+++. | ++||.=++
T Consensus 107 ~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~ 135 (355)
T 3sre_A 107 LDISSFNPHGISTFIDDDNTVYLLVVNHP 135 (355)
T ss_dssp CCGGGCCEEEEEEEECTTCCEEEEEEECS
T ss_pred CCcCceeeeeeEEEECCCCcEEEEEEECC
Confidence 555556799999852 4 68888665
No 232
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=22.75 E-value=1.8e+02 Score=25.37 Aligned_cols=59 Identities=12% Similarity=0.021 Sum_probs=35.4
Q ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCCC
Q psy13477 184 AIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELAY 263 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 263 (295)
.|.+||+.+++.++++..... ...+..+.+.. ++.+++.+. .++
T Consensus 155 ~i~iwd~~~~~~~~~~~~~~~-------------------------------~~~v~~~~~~~----~~~~l~~~~-~d~ 198 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPDVH-------------------------------PDTIYSVDWSR----DGALICTSC-RDK 198 (402)
T ss_dssp CEEEEETTTTEEEEEECTTTC-------------------------------CSCEEEEEECT----TSSCEEEEE-TTS
T ss_pred EEEEEECCCCCccEEEecCCC-------------------------------CCceEEEEECC----CCCEEEEEe-cCC
Confidence 588999999998877742221 12355566653 123333333 235
Q ss_pred eEEEEEcCCCeEEEE
Q psy13477 264 GLLSYSWEENTSWRA 278 (295)
Q Consensus 264 gLIVydl~~~~swRv 278 (295)
.|.+||+++++.-+.
T Consensus 199 ~i~iwd~~~~~~~~~ 213 (402)
T 2aq5_A 199 RVRVIEPRKGTVVAE 213 (402)
T ss_dssp EEEEEETTTTEEEEE
T ss_pred cEEEEeCCCCceeee
Confidence 688888888765543
No 233
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=22.67 E-value=82 Score=28.27 Aligned_cols=16 Identities=25% Similarity=0.478 Sum_probs=8.7
Q ss_pred CCeEEEEEcCCCeEEE
Q psy13477 262 AYGLLSYSWEENTSWR 277 (295)
Q Consensus 262 ~~gLIVydl~~~~swR 277 (295)
+..|.|||+++|+.+|
T Consensus 420 d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 420 GYHILIWSQQEARTRK 435 (435)
T ss_dssp SSEEEECCCC------
T ss_pred CCcEEEEECCcCeeeC
Confidence 4589999999998764
No 234
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=22.66 E-value=1.8e+02 Score=29.83 Aligned_cols=79 Identities=10% Similarity=-0.044 Sum_probs=0.0
Q ss_pred EeEEEEcCCCcEEEEeCCCCCCC--CCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCC
Q psy13477 152 TYRIKADSCDRLWVLDSGTVGIG--NTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFR 229 (295)
Q Consensus 152 V~~i~iD~c~rLWVLDtG~~~~~--~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~ 229 (295)
+..+.+.++|++|++ .+..+.. .......+++|..||++++++..-. +
T Consensus 559 ~~~~~~s~dg~~~~~-~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~----~------------------------- 608 (1045)
T 1k32_A 559 YRMIIPLESSILIYS-VPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK----N------------------------- 608 (1045)
T ss_dssp EEEEEECSSEEEEEE-CCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEE----E-------------------------
T ss_pred hhheEEcCCCeEEEE-ecccCcccccccccCCCceEEEEECCCCcEEEee----c-------------------------
Q ss_pred CcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCe
Q psy13477 230 PEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENT 274 (295)
Q Consensus 230 ~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~ 274 (295)
....+++.. ++.+++++..+ ++.+||+++++
T Consensus 609 --------~v~~~~~S~----DG~~l~~~~~~--~i~~~d~~~~~ 639 (1045)
T 1k32_A 609 --------NLTDLRLSA----DRKTVMVRKDD--GKIYTFPLEKP 639 (1045)
T ss_dssp --------EEEEEEECT----TSCEEEEEETT--SCEEEEESSCT
T ss_pred --------CcceEEECC----CCCEEEEEcCC--cEEEEeCccCc
No 235
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=22.52 E-value=2.1e+02 Score=25.43 Aligned_cols=18 Identities=22% Similarity=0.137 Sum_probs=14.8
Q ss_pred eEEEEECCCCcEEEEEEc
Q psy13477 184 AIHVFDLKTDRRIRKYQF 201 (295)
Q Consensus 184 KLvvfDL~td~lir~y~~ 201 (295)
.|.+||+.+++.++++.-
T Consensus 154 ~i~iwd~~~~~~~~~~~~ 171 (435)
T 1p22_A 154 TIKIWDKNTLECKRILTG 171 (435)
T ss_dssp CEEEEESSSCCEEEEECC
T ss_pred eEEEEeCCCCeEEEEEcC
Confidence 588999999998877653
No 236
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=22.11 E-value=2.4e+02 Score=24.54 Aligned_cols=32 Identities=6% Similarity=0.059 Sum_probs=18.5
Q ss_pred CceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCe
Q psy13477 238 FIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENT 274 (295)
Q Consensus 238 ~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~ 274 (295)
.+..+++.. ++.++..+ ..++.|-+||++++.
T Consensus 242 ~v~~~~~s~----~~~~l~s~-s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 242 DVVDMKWST----DGSKLAVV-SDKWTLHVFEIFNDQ 273 (355)
T ss_dssp CEEEEEECT----TSCEEEEE-ETTCEEEEEESSCCS
T ss_pred cEEEEEECC----CCCEEEEE-ECCCEEEEEEccCCC
Confidence 356666653 13333332 234679999998764
No 237
>3l48_A Outer membrane usher protein PAPC; IG fold, greek KEY, cell outer membrane, fimbrium, transmembrane, transport, transport protein; 2.10A {Escherichia coli} PDB: 2kt6_A
Probab=22.05 E-value=1.2e+02 Score=23.18 Aligned_cols=28 Identities=14% Similarity=0.271 Sum_probs=24.5
Q ss_pred CeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 252 DTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 252 ~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
++.+|+++....+-+.+.|.++..+++.
T Consensus 42 ~G~vyl~gl~~~g~L~V~Wg~~~~C~i~ 69 (94)
T 3l48_A 42 EGLAWLSGVTPGETLSVNWDGKIQCQVN 69 (94)
T ss_dssp GGEEEESSCCTTCEEEEECSSSEEEEEE
T ss_pred CCEEEEECCCCCCEEEEEECCCCeEEEE
Confidence 7899999998888777788888899998
No 238
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=21.94 E-value=3.4e+02 Score=22.41 Aligned_cols=66 Identities=9% Similarity=0.046 Sum_probs=37.5
Q ss_pred eEEEEECCCCc-EEEEEEcCCCCCCCCceeeeeecchhhhhccccCCCcccCCCCCceeEEEeccCCCCCeEEEEEcCCC
Q psy13477 184 AIHVFDLKTDR-RIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRPEDILPGTFIANIAVDVGKNCEDTFLYASDELA 262 (295)
Q Consensus 184 KLvvfDL~td~-lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~ 262 (295)
.|.+||+.+++ .++.+..... .....+..++....-..++.+++.+.. .
T Consensus 140 ~i~vwd~~~~~~~~~~~~~~~~-----------------------------~~~~~v~~~~~~~~~~~~~~~l~~~~~-d 189 (357)
T 3i2n_A 140 TVKVWDPRQKDDPVANMEPVQG-----------------------------ENKRDCWTVAFGNAYNQEERVVCAGYD-N 189 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCTT-----------------------------SCCCCEEEEEEECCCC-CCCEEEEEET-T
T ss_pred eEEEEeCCCCCCcceeccccCC-----------------------------CCCCceEEEEEEeccCCCCCEEEEEcc-C
Confidence 58889998887 6666655433 112235555544311123444444433 3
Q ss_pred CeEEEEEcCCCeEEEEe
Q psy13477 263 YGLLSYSWEENTSWRAS 279 (295)
Q Consensus 263 ~gLIVydl~~~~swRv~ 279 (295)
+.|.+||+++++.-...
T Consensus 190 ~~i~i~d~~~~~~~~~~ 206 (357)
T 3i2n_A 190 GDIKLFDLRNMALRWET 206 (357)
T ss_dssp SEEEEEETTTTEEEEEE
T ss_pred CeEEEEECccCceeeec
Confidence 57999999998864433
No 239
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=21.87 E-value=3.2e+02 Score=28.04 Aligned_cols=81 Identities=11% Similarity=0.115 Sum_probs=48.8
Q ss_pred EEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCCC
Q psy13477 151 TTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFRP 230 (295)
Q Consensus 151 sV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~~ 230 (295)
.|..+...++|++-+. |.. .-.|.+||+.+++.++++.-...
T Consensus 659 ~v~~~~~s~~~~~l~s--~~~----------d~~v~vwd~~~~~~~~~~~~~~~-------------------------- 700 (1249)
T 3sfz_A 659 EVLCCAFSSDDSYIAT--CSA----------DKKVKIWDSATGKLVHTYDEHSE-------------------------- 700 (1249)
T ss_dssp CEEEEEECTTSSEEEE--EET----------TSEEEEEETTTCCEEEEEECCSS--------------------------
T ss_pred CEEEEEEecCCCEEEE--EeC----------CCeEEEEECCCCceEEEEcCCCC--------------------------
Confidence 3555666666665442 211 23699999999999988875443
Q ss_pred cccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 231 EDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 231 ~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
.+..+++... .+..+.++-..++.|.+||+.+++.-+..
T Consensus 701 -------~v~~~~~~~~---~~~~~l~sg~~d~~v~vwd~~~~~~~~~~ 739 (1249)
T 3sfz_A 701 -------QVNCCHFTNK---SNHLLLATGSNDFFLKLWDLNQKECRNTM 739 (1249)
T ss_dssp -------CEEEEEECSS---SSCCEEEEEETTSCEEEEETTSSSEEEEE
T ss_pred -------cEEEEEEecC---CCceEEEEEeCCCeEEEEECCCcchhhee
Confidence 2444444321 12334444444567889999888766544
No 240
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=20.75 E-value=4.8e+02 Score=26.69 Aligned_cols=80 Identities=8% Similarity=0.071 Sum_probs=51.0
Q ss_pred EEEeEEEEcCCCcEEEEeCCCCCCCCCccccCCceEEEEECCCCcEEEEEEcCCCCCCCCceeeeeecchhhhhccccCC
Q psy13477 150 TTTYRIKADSCDRLWVLDSGTVGIGNTTKQICPYAIHVFDLKTDRRIRKYQFRPEDILPGTFIANIAVDTDRRIRKYQFR 229 (295)
Q Consensus 150 vsV~~i~iD~c~rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~~~~~~ia~~~~~~~~~~~~~ 229 (295)
..|..+...++|++-+. |.. .-.|.+||+.+++.++++.-...
T Consensus 616 ~~v~~~~~s~~~~~l~s--~~~----------d~~i~vw~~~~~~~~~~~~~h~~------------------------- 658 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIAS--CGA----------DKTLQVFKAETGEKLLDIKAHED------------------------- 658 (1249)
T ss_dssp SCEEEEEECTTSSEEEE--EET----------TSCEEEEETTTCCEEEEECCCSS-------------------------
T ss_pred ccEEEEEECCCCCEEEE--EeC----------CCeEEEEECCCCCEEEEeccCCC-------------------------
Confidence 45777777777775542 221 12699999999998887653222
Q ss_pred CcccCCCCCceeEEEeccCCCCCeEEEEEcCCCCeEEEEEcCCCeEEEEe
Q psy13477 230 PEDILPGTFIANIAVDVGKNCEDTFLYASDELAYGLLSYSWEENTSWRAS 279 (295)
Q Consensus 230 ~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 279 (295)
.+..+++.. ++.++..+. .++.|.|||+.+++.-+..
T Consensus 659 --------~v~~~~~s~----~~~~l~s~~-~d~~v~vwd~~~~~~~~~~ 695 (1249)
T 3sfz_A 659 --------EVLCCAFSS----DDSYIATCS-ADKKVKIWDSATGKLVHTY 695 (1249)
T ss_dssp --------CEEEEEECT----TSSEEEEEE-TTSEEEEEETTTCCEEEEE
T ss_pred --------CEEEEEEec----CCCEEEEEe-CCCeEEEEECCCCceEEEE
Confidence 355566653 234555443 3457999999998866654
Done!