BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13486
(91 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9GP71|YELL_DROMD Protein yellow OS=Drosophila madeirensis GN=y PE=3 SV=1
Length = 568
Score = 101 bits (251), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/84 (52%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Query: 1 MDHNGILYFNLIDRNAVGCWNSQYPYKPENIGHIDIDNEALIFPSDVKV-VGDDLWVISD 59
M +G+ FNLID+NAVGCW+S PY P++ G +D D+ L+FP+DVK+ ++WV+SD
Sbjct: 320 MSDDGVELFNLIDQNAVGCWHSSMPYSPQSHGIVDRDDVGLVFPADVKIDENKNVWVLSD 379
Query: 60 RMPIHLESELNFNDVNFRIFTVPL 83
RMP+ L S+L+++D NFRI+T PL
Sbjct: 380 RMPVFLLSDLDYSDTNFRIYTAPL 403
>sp|O02437|YELL_DROSU Protein yellow OS=Drosophila subobscura GN=y PE=3 SV=1
Length = 568
Score = 100 bits (250), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Query: 1 MDHNGILYFNLIDRNAVGCWNSQYPYKPENIGHIDIDNEALIFPSDVKV-VGDDLWVISD 59
M +G+ FNLID+NAVGCW+S PY P++ G +D D+ L+FP+D+K+ ++WV+SD
Sbjct: 320 MSDDGVELFNLIDQNAVGCWHSSMPYSPQSHGIVDRDDVGLVFPADIKIDENKNVWVLSD 379
Query: 60 RMPIHLESELNFNDVNFRIFTVPL 83
RMP+ L S+L+++D NFRI+T PL
Sbjct: 380 RMPVFLLSDLDYSDTNFRIYTAPL 403
>sp|Q9GP81|YELL_DROGU Protein yellow OS=Drosophila guanche GN=y PE=3 SV=1
Length = 568
Score = 100 bits (248), Expect = 4e-21, Method: Composition-based stats.
Identities = 44/84 (52%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Query: 1 MDHNGILYFNLIDRNAVGCWNSQYPYKPENIGHIDIDNEALIFPSDVKV-VGDDLWVISD 59
M +G+ FNLID+NAVGCW+S PY P+ G +D D+ L+FP+DVK+ ++WV+SD
Sbjct: 320 MSDDGVELFNLIDQNAVGCWHSSMPYSPQFHGIVDRDDVGLVFPADVKIDENKNVWVLSD 379
Query: 60 RMPIHLESELNFNDVNFRIFTVPL 83
RMP+ L S+L+++D NFRI+T PL
Sbjct: 380 RMPVFLLSDLDYSDTNFRIYTAPL 403
>sp|Q9BI18|YELL_DROPS Protein yellow OS=Drosophila pseudoobscura pseudoobscura GN=y PE=3
SV=2
Length = 560
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Query: 1 MDHNGILYFNLIDRNAVGCWNSQYPYKPENIGHIDIDNEALIFPSDVKV-VGDDLWVISD 59
M +G+ FNLID+NAVGCW+S PY P+ G +D D+ L+FP+DVK+ ++WV+SD
Sbjct: 322 MSDDGVELFNLIDQNAVGCWHSSMPYSPQFHGIVDRDDVGLVFPADVKIDENKNVWVLSD 381
Query: 60 RMPIHLESELNFNDVNFRIFTVPLQEAV 87
RMP+ L S+L+++D+NFRI+T PL +
Sbjct: 382 RMPVFLLSDLDYSDINFRIYTAPLATLI 409
>sp|Q9BI17|YELL_DROYA Protein yellow OS=Drosophila yakuba GN=y PE=3 SV=1
Length = 541
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Query: 1 MDHNGILYFNLIDRNAVGCWNSQYPYKPENIGHIDIDNEALIFPSDVKV-VGDDLWVISD 59
M +GI FNLID+NAVGCW+S PY P+ G +D D+ L+FP+DVK+ ++WV+SD
Sbjct: 313 MSDDGIELFNLIDQNAVGCWHSSMPYSPQFHGIVDRDDVGLVFPADVKIDENKNVWVLSD 372
Query: 60 RMPIHLESELNFNDVNFRIFTVPLQEAV 87
RMP+ L S+L+++D NFRI+T PL +
Sbjct: 373 RMPVFLLSDLDYSDTNFRIYTAPLATLI 400
>sp|Q9BI23|YELL_DROER Protein yellow OS=Drosophila erecta GN=y PE=3 SV=1
Length = 541
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Query: 1 MDHNGILYFNLIDRNAVGCWNSQYPYKPENIGHIDIDNEALIFPSDVKV-VGDDLWVISD 59
M +GI FNLID+NAVGCW+S PY P+ G +D D+ L+FP+DVK+ ++WV+SD
Sbjct: 313 MSDDGIELFNLIDQNAVGCWHSSMPYSPQFHGIVDRDDVGLVFPADVKIDENKNVWVLSD 372
Query: 60 RMPIHLESELNFNDVNFRIFTVPLQEAV 87
RMP+ L S+L+++D NFRI+T PL +
Sbjct: 373 RMPVFLLSDLDYSDTNFRIYTAPLATLI 400
>sp|P09957|YELL_DROME Protein yellow OS=Drosophila melanogaster GN=y PE=1 SV=1
Length = 541
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Query: 1 MDHNGILYFNLIDRNAVGCWNSQYPYKPENIGHIDIDNEALIFPSDVKV-VGDDLWVISD 59
M +GI FNLID+NAVGCW+S PY P+ G +D D+ L+FP+DVK+ ++WV+SD
Sbjct: 313 MSDDGIELFNLIDQNAVGCWHSSMPYSPQFHGIVDRDDVGLVFPADVKIDENKNVWVLSD 372
Query: 60 RMPIHLESELNFNDVNFRIFTVPLQEAV 87
RMP+ L S+L+++D NFRI+T PL +
Sbjct: 373 RMPVFLLSDLDYSDTNFRIYTAPLATLI 400
>sp|P62407|YELL_DROSI Protein yellow OS=Drosophila simulans GN=y PE=3 SV=1
Length = 541
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Query: 1 MDHNGILYFNLIDRNAVGCWNSQYPYKPENIGHIDIDNEALIFPSDVKV-VGDDLWVISD 59
M +GI FNLID+NAVGCW+S PY P+ G +D D+ L+FP+DVK+ ++WV+SD
Sbjct: 313 MSDDGIELFNLIDQNAVGCWHSSMPYSPQFHGIVDRDDVGLVFPADVKIDENKNVWVLSD 372
Query: 60 RMPIHLESELNFNDVNFRIFTVPLQEAV 87
RMP+ L S+L+++D NFRI+T PL +
Sbjct: 373 RMPVFLLSDLDYSDTNFRIYTAPLATLI 400
>sp|P62408|YELL_DROMA Protein yellow OS=Drosophila mauritiana GN=y PE=3 SV=1
Length = 541
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Query: 1 MDHNGILYFNLIDRNAVGCWNSQYPYKPENIGHIDIDNEALIFPSDVKV-VGDDLWVISD 59
M +GI FNLID+NAVGCW+S PY P+ G +D D+ L+FP+DVK+ ++WV+SD
Sbjct: 313 MSDDGIELFNLIDQNAVGCWHSSMPYSPQFHGIVDRDDVGLVFPADVKIDENKNVWVLSD 372
Query: 60 RMPIHLESELNFNDVNFRIFTVPLQEAV 87
RMP+ L S+L+++D NFRI+T PL +
Sbjct: 373 RMPVFLLSDLDYSDTNFRIYTAPLATLI 400
>sp|O77061|MRJP2_APIME Major royal jelly protein 2 OS=Apis mellifera GN=MRJP2 PE=1 SV=1
Length = 452
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 1 MDHNGILYFNLIDRNAVGCWNSQYPYKPENIGHIDIDNEALIFPSDVKV-------VGDD 53
+ NG+L+ L+ +AVGCWN + +N+ + ++ L + +K+ VG +
Sbjct: 309 VSKNGVLFVGLVGNSAVGCWNEHQSLQRQNLEMVAQNDRTLQMIAGMKIKEELPHFVGSN 368
Query: 54 -------LWVISDRMPIHLESELNFNDVNFRIFTVPLQEAVR 88
+ V+S+RM + + NF+DVNFRI ++E +R
Sbjct: 369 KPVKDEYMLVLSNRMQKIVNDDFNFDDVNFRILGANVKELIR 410
>sp|O18330|MRJP1_APIME Major royal jelly protein 1 OS=Apis mellifera GN=MRJP1 PE=1 SV=1
Length = 432
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 14/101 (13%)
Query: 1 MDHNGILYFNLIDRNAVGCWNSQYPYKPENIGHIDIDNEALIFPSDVKVV---------- 50
+ +G+L+F L+ +A+GCWN + NI + +E L + +K+
Sbjct: 311 VSKSGVLFFGLVGDSALGCWNEHRTLERHNIRTVAQSDETLQMIASMKIKEALPHVPIFD 370
Query: 51 ----GDDLWVISDRMPIHLESELNFNDVNFRIFTVPLQEAV 87
+ + V+S++M + ++ NF+DVNFRI + E +
Sbjct: 371 RYINREYILVLSNKMQKMVNNDFNFDDVNFRIMNANVNELI 411
>sp|O97432|MRJP5_APIME Major royal jelly protein 5 OS=Apis mellifera GN=MRJP5 PE=2 SV=1
Length = 598
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 1 MDHNGILYFNLIDRNAVGCWNSQYPYKPENIGHIDIDNEAL 41
M NG+L+F L++ +A+GCWN P + EN+ + + E L
Sbjct: 312 MSKNGVLFFGLMNNSAIGCWNEHQPLQRENMDMVAQNEETL 352
>sp|Q17061|MRJP4_APIME Major royal jelly protein 4 OS=Apis mellifera GN=MRJP4 PE=1 SV=1
Length = 464
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 15/99 (15%)
Query: 4 NGILYFNLIDRNAVGCWNSQYPYKPENIGHIDIDNEALIFPSDVKVV------------- 50
NG+L F L + N + CWN +NI + + + L +K+
Sbjct: 313 NGVLLFGLAN-NTLSCWNEHQSLDRQNIDVVARNEDTLQMVVSMKIKQNVPQSGRVNNTQ 371
Query: 51 -GDDLWVISDRMPIHLESELNFNDVNFRIFTVPLQEAVR 88
+ L +SDR L ++LN VNF+I + + +R
Sbjct: 372 RNEYLLALSDRNQNVLNNDLNLEHVNFQILGANVNDLIR 410
>sp|P09315|G3PA_MAIZE Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea
mays GN=GAPA PE=2 SV=1
Length = 403
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 21/78 (26%)
Query: 9 FNLIDRNAVGCWNSQYPYKPENIGHID-------------IDNEALIFPSDVKVVGDD-- 53
F I RN + CW+ + P ++ I+ D+ IF +DVK VGD+
Sbjct: 75 FGRIGRNFLRCWHGRGDASPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGDNAI 134
Query: 54 ------LWVISDRMPIHL 65
+ V+SDR P +L
Sbjct: 135 SVDGKVIKVVSDRNPSNL 152
>sp|Q8KC74|SYV_CHLTE Valine--tRNA ligase OS=Chlorobium tepidum (strain ATCC 49652 / DSM
12025 / TLS) GN=valS PE=3 SV=1
Length = 901
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 13 DRNAVGCWNSQYPYKPENIG----HIDIDNEALIFPSDVKVVGDDL---WVISDRMP-IH 64
D + + W S + + +G H D D+ +P+D V G D+ WV M +H
Sbjct: 454 DEDVLDTWFSSWLWPLTTLGWTGPHSDNDDLRAFYPTDTLVTGPDIIFFWVARMIMAGLH 513
Query: 65 LESELNFNDVNF 76
+ ++ F DV F
Sbjct: 514 FKGDVPFRDVYF 525
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.142 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,884,211
Number of Sequences: 539616
Number of extensions: 1361374
Number of successful extensions: 2573
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2544
Number of HSP's gapped (non-prelim): 19
length of query: 91
length of database: 191,569,459
effective HSP length: 61
effective length of query: 30
effective length of database: 158,652,883
effective search space: 4759586490
effective search space used: 4759586490
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)