Query psy13489
Match_columns 172
No_of_seqs 142 out of 203
Neff 4.5
Searched_HMMs 29240
Date Fri Aug 16 20:40:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13489.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13489hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b34_A Aminopeptidase N; prote 97.2 0.0011 3.8E-08 64.2 8.8 62 80-141 550-627 (891)
2 1te4_A Conserved protein MTH18 96.7 0.0054 1.8E-07 44.2 7.4 57 103-161 47-103 (131)
3 1te4_A Conserved protein MTH18 95.8 0.013 4.5E-07 42.2 5.1 56 100-158 76-131 (131)
4 3ltm_A Alpha-REP4; protein eng 95.7 0.019 6.6E-07 43.5 5.7 52 108-161 153-204 (211)
5 3ltm_A Alpha-REP4; protein eng 95.7 0.023 7.7E-07 43.1 6.1 56 102-160 24-79 (211)
6 3ltj_A Alpharep-4; protein eng 95.4 0.031 1.1E-06 42.0 6.1 55 105-161 114-168 (201)
7 3ltj_A Alpharep-4; protein eng 95.4 0.029 9.9E-07 42.2 5.8 51 108-160 86-136 (201)
8 1oyz_A Hypothetical protein YI 94.6 0.048 1.6E-06 43.1 5.2 50 108-159 169-220 (280)
9 2gtq_A Aminopeptidase N; alani 94.2 0.15 5.3E-06 49.0 8.8 74 80-153 524-613 (867)
10 1oyz_A Hypothetical protein YI 93.7 0.12 4E-06 40.8 5.8 58 100-160 26-83 (280)
11 3ebh_A PFA-M1, M1 family amino 88.9 0.43 1.5E-05 46.5 5.1 46 80-125 534-579 (889)
12 4db8_A Armadillo-repeat protei 84.1 1.5 5E-05 33.5 4.9 62 97-160 11-83 (252)
13 4db6_A Armadillo repeat protei 82.0 2.3 7.8E-05 31.5 5.2 62 97-160 11-83 (210)
14 2vgl_B AP-2 complex subunit be 76.7 4.6 0.00016 36.0 6.3 51 108-160 96-150 (591)
15 4db6_A Armadillo repeat protei 71.2 6.8 0.00023 28.8 5.1 56 103-160 59-125 (210)
16 1ibr_B P95, importin beta-1 su 69.7 14 0.00047 30.1 7.1 59 102-162 370-439 (462)
17 2jdq_A Importin alpha-1 subuni 69.0 8.6 0.00029 31.4 5.7 59 101-161 68-137 (450)
18 4hxt_A De novo protein OR329; 69.0 9.8 0.00033 28.3 5.6 54 105-160 51-115 (252)
19 1w63_A Adapter-related protein 68.8 7.7 0.00026 35.0 5.8 51 108-160 117-171 (618)
20 4hxt_A De novo protein OR329; 65.8 8.9 0.00031 28.5 4.8 57 102-161 7-74 (252)
21 3ul1_B Importin subunit alpha- 65.5 11 0.00038 32.8 6.0 60 99-160 59-130 (510)
22 4db8_A Armadillo-repeat protei 65.5 14 0.00049 27.8 6.0 55 105-161 61-126 (252)
23 3ul1_B Importin subunit alpha- 62.9 9.4 0.00032 33.2 5.0 60 100-161 103-173 (510)
24 4ady_A RPN2, 26S proteasome re 60.0 11 0.00038 37.2 5.5 57 103-161 617-677 (963)
25 2qk2_A LP04448P; mini spindles 59.0 20 0.00067 27.5 5.8 56 103-161 139-206 (242)
26 4b8j_A Importin subunit alpha- 57.8 14 0.00047 31.6 5.1 61 99-161 76-148 (528)
27 4fdd_A Transportin-1; heat rep 56.4 28 0.00095 31.8 7.2 61 99-161 360-430 (852)
28 1wa5_B Importin alpha subunit; 56.2 16 0.00055 31.3 5.3 60 100-161 133-203 (530)
29 3tpo_A Importin subunit alpha- 54.6 18 0.00062 31.4 5.4 59 101-161 123-192 (529)
30 4b8j_A Importin subunit alpha- 54.4 19 0.00065 30.7 5.4 61 99-161 119-190 (528)
31 1wa5_B Importin alpha subunit; 52.9 19 0.00064 30.9 5.1 61 98-160 88-160 (530)
32 1lsh_A Lipovitellin (LV-1N, LV 52.6 11 0.00037 36.8 4.0 65 97-161 439-508 (1056)
33 1b3u_A Protein (protein phosph 51.8 14 0.00048 31.2 4.1 55 104-160 170-232 (588)
34 2jdq_A Importin alpha-1 subuni 51.0 27 0.00092 28.4 5.6 54 105-160 241-305 (450)
35 1b3u_A Protein (protein phosph 50.6 18 0.00061 30.5 4.6 55 105-161 249-311 (588)
36 2qk2_A LP04448P; mini spindles 48.1 34 0.0012 26.1 5.5 59 102-163 20-89 (242)
37 3tpo_A Importin subunit alpha- 47.8 35 0.0012 29.6 6.1 60 99-160 78-149 (529)
38 1lrv_A LRV, leucine-rich repea 46.6 5.8 0.0002 32.5 0.9 43 105-156 177-219 (244)
39 1z5h_A Tricorn protease intera 44.4 8.6 0.0003 36.2 1.8 79 79-160 472-557 (780)
40 3b34_A Aminopeptidase N; prote 44.0 7.7 0.00026 37.6 1.4 28 5-32 397-424 (891)
41 3cia_A Cold-active aminopeptid 43.9 11 0.00037 34.4 2.3 25 7-31 383-407 (605)
42 2xdt_A Endoplasmic reticulum a 43.5 10 0.00036 36.3 2.3 82 77-159 549-639 (897)
43 2gtq_A Aminopeptidase N; alani 43.2 8.3 0.00028 37.1 1.5 28 5-32 372-399 (867)
44 2xq0_A LTA-4 hydrolase, leukot 42.4 11 0.00039 34.5 2.2 25 7-31 387-412 (632)
45 1qgr_A Protein (importin beta 41.5 53 0.0018 29.3 6.4 58 102-161 370-438 (876)
46 1jdh_A Beta-catenin; beta-cate 40.6 62 0.0021 26.9 6.4 59 101-161 63-131 (529)
47 2z6g_A B-catenin; FULL-length, 38.1 37 0.0012 31.5 5.0 59 101-161 196-264 (780)
48 2qk1_A Protein STU2; STU2P, XM 37.6 1.2E+02 0.0039 24.0 7.3 60 101-163 20-93 (249)
49 3jxy_A Alkylpurine DNA glycosy 36.8 26 0.00089 27.9 3.3 42 118-159 9-50 (232)
50 4ady_A RPN2, 26S proteasome re 35.9 80 0.0027 31.2 7.1 59 99-159 543-606 (963)
51 3tjz_B Coatomer subunit gamma; 35.8 49 0.0017 28.6 5.1 50 109-160 115-168 (355)
52 4fke_A Aminopeptidase N; zinc 34.2 18 0.00062 34.6 2.3 25 7-31 408-432 (909)
53 1xqr_A HSPBP1 protein; armadil 33.9 66 0.0023 26.5 5.5 59 101-161 128-197 (296)
54 2vgl_B AP-2 complex subunit be 33.9 39 0.0013 29.9 4.3 57 103-161 126-190 (591)
55 2vgl_A Adaptor protein complex 33.6 47 0.0016 30.1 4.8 54 108-161 121-178 (621)
56 2z6h_A Catenin beta-1, beta-ca 32.5 87 0.003 27.7 6.3 60 100-161 59-128 (644)
57 1jdh_A Beta-catenin; beta-cate 30.0 82 0.0028 26.2 5.4 62 100-161 268-340 (529)
58 1lrv_A LRV, leucine-rich repea 29.7 23 0.00079 28.8 1.9 45 102-156 198-242 (244)
59 1w63_A Adapter-related protein 29.1 1.1E+02 0.0039 27.2 6.5 60 100-161 352-415 (618)
60 2z6g_A B-catenin; FULL-length, 28.8 73 0.0025 29.5 5.3 55 106-161 158-223 (780)
61 3ebh_A PFA-M1, M1 family amino 28.3 24 0.00082 34.3 2.0 25 7-31 382-406 (889)
62 3u9w_A Leukotriene A-4 hydrola 28.3 26 0.00088 31.9 2.1 21 8-28 379-399 (608)
63 1lsh_A Lipovitellin (LV-1N, LV 27.5 41 0.0014 32.8 3.5 49 111-159 491-542 (1056)
64 1ibr_B P95, importin beta-1 su 26.3 74 0.0025 25.7 4.4 56 103-159 7-65 (462)
65 2qk1_A Protein STU2; STU2P, XM 24.3 1.2E+02 0.0041 23.9 5.3 57 102-161 151-221 (249)
66 3se6_A Endoplasmic reticulum a 23.9 35 0.0012 33.2 2.3 24 8-31 453-476 (967)
67 1u6g_C TIP120 protein, CAND1; 23.7 1.2E+02 0.004 29.0 5.8 57 102-161 53-116 (1230)
68 3now_A UNC-45 protein, SD10334 21.4 1.2E+02 0.0041 29.1 5.4 59 101-161 584-653 (810)
69 1xqr_A HSPBP1 protein; armadil 20.2 1.1E+02 0.0038 25.1 4.4 58 102-161 171-239 (296)
No 1
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=97.16 E-value=0.0011 Score=64.21 Aligned_cols=62 Identities=19% Similarity=0.153 Sum_probs=54.5
Q ss_pred eEEecCCCceeEEEeecCCHHHHHHHHhhCCChHHHHHHHHHHhcCC----------------ChhHHHHHHHHhhcC
Q psy13489 80 WIRLDPEMTIIRSVVIEQPDYQWQYQLRHERDVTAQFDAIRALERFP----------------TTTTRLALTDTIESE 141 (172)
Q Consensus 80 WIRiDpd~ewL~~v~~~QP~~Mw~~QLq~DrDVvAQ~EAI~aL~k~~----------------s~~~~~~L~r~L~d~ 141 (172)
||++|++|....+|+.++++++|..||++|+|+.+|.||++.|++.. +...+.++..+|.|+
T Consensus 550 ~~~l~~~~s~~~~v~~~~~~~~l~~~l~~d~d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 627 (891)
T 3b34_A 550 VPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWDAAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDE 627 (891)
T ss_dssp EEEESTTCCSSCEEECCCCHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHCS
T ss_pred cEEEcCCCcceEEEeCCCCHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHhhhcCCCcCccHHHHHHHHHHhcCC
Confidence 69999999999999999999999999999999999999999998742 134677888888764
No 2
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=96.74 E-value=0.0054 Score=44.23 Aligned_cols=57 Identities=18% Similarity=0.124 Sum_probs=49.4
Q ss_pred HHHHhhCCChHHHHHHHHHHhcCCChhHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 103 QYQLRHERDVTAQFDAIRALERFPTTTTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 103 ~~QLq~DrDVvAQ~EAI~aL~k~~s~~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
...+-.|+|...|..|+.+|++.+...++..|.+.+.|+ -+.||..|+.+|+++...
T Consensus 47 L~~~L~d~~~~vR~~A~~aL~~~~~~~a~~~L~~~L~d~--~~~VR~~A~~aL~~~~~~ 103 (131)
T 1te4_A 47 LLESLSNEDWRIRGAAAWIIGNFQDERAVEPLIKLLEDD--SGFVRSGAARSLEQIGGE 103 (131)
T ss_dssp HHHGGGCSCHHHHHHHHHHHGGGCSHHHHHHHHHHHHHC--CTHHHHHHHHHHHHHCSH
T ss_pred HHHHHcCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHcCC--CHHHHHHHHHHHHHhCcH
Confidence 334446899999999999999999999999999999875 679999999999998764
No 3
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=95.83 E-value=0.013 Score=42.15 Aligned_cols=56 Identities=20% Similarity=0.079 Sum_probs=47.8
Q ss_pred HHHHHHHhhCCChHHHHHHHHHHhcCCChhHHHHHHHHhhcCCcchHHHHHHHHHHHhh
Q psy13489 100 YQWQYQLRHERDVTAQFDAIRALERFPTTTTRLALTDTIESERAYVQVRCKAAQALTKV 158 (172)
Q Consensus 100 ~Mw~~QLq~DrDVvAQ~EAI~aL~k~~s~~~~~~L~r~L~d~~~FygVR~eAA~aLak~ 158 (172)
......| .|+|..-+..|+.+|++.+.+.+...|...+.++ -..||..|+.+|+++
T Consensus 76 ~~L~~~L-~d~~~~VR~~A~~aL~~~~~~~a~~~L~~~l~d~--~~~vr~~A~~aL~~i 131 (131)
T 1te4_A 76 EPLIKLL-EDDSGFVRSGAARSLEQIGGERVRAAMEKLAETG--TGFARKVAVNYLETH 131 (131)
T ss_dssp HHHHHHH-HHCCTHHHHHHHHHHHHHCSHHHHHHHHHHTTSC--CTHHHHHHHHHGGGC
T ss_pred HHHHHHH-cCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHhCC--CHHHHHHHHHHHHhC
Confidence 3444555 6899999999999999999999999999999765 468999999999874
No 4
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=95.67 E-value=0.019 Score=43.49 Aligned_cols=52 Identities=21% Similarity=0.126 Sum_probs=24.6
Q ss_pred hCCChHHHHHHHHHHhcCCChhHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 108 HERDVTAQFDAIRALERFPTTTTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 108 ~DrDVvAQ~EAI~aL~k~~s~~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
.|+|..-+..|+.+|++.+.+.+...|.+.+.++. ..||..|+.+|.++.+.
T Consensus 153 ~d~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~d~~--~~vr~~A~~aL~~~~~~ 204 (211)
T 3ltm_A 153 KDEDGWVRQSAADALGEIGGERVRAAMEKLAETGT--GFARKVAVNYLETHKSF 204 (211)
T ss_dssp TCSSHHHHHHHHHHHHHHCSHHHHHHHHHHHHHCC--HHHHHHHHHHHHC----
T ss_pred cCCCHHHHHHHHHHHHHhCchhHHHHHHHHHhCCC--HHHHHHHHHHHHhcCCC
Confidence 44555555555555555555555555555554432 33555555555555443
No 5
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=95.65 E-value=0.023 Score=43.10 Aligned_cols=56 Identities=21% Similarity=0.225 Sum_probs=30.0
Q ss_pred HHHHHhhCCChHHHHHHHHHHhcCCChhHHHHHHHHhhcCCcchHHHHHHHHHHHhhhh
Q psy13489 102 WQYQLRHERDVTAQFDAIRALERFPTTTTRLALTDTIESERAYVQVRCKAAQALTKVKE 160 (172)
Q Consensus 102 w~~QLq~DrDVvAQ~EAI~aL~k~~s~~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~ 160 (172)
+...|. |+|..-|..|+.+|++.+.+.+...|.+.+.++ ...||..|+.+|+++..
T Consensus 24 L~~~L~-~~~~~vR~~A~~~L~~~~~~~~~~~L~~~l~~~--~~~vr~~a~~aL~~~~~ 79 (211)
T 3ltm_A 24 YIKNLQ-DDSYYVRRAAAYALGKIGDERAVEPLIKALKDE--DAWVRRAAADALGQIGD 79 (211)
T ss_dssp HHHHTT-CSSHHHHHHHHHHHHHHCCGGGHHHHHHHTTCS--CHHHHHHHHHHHHHHCC
T ss_pred HHHHHc-CCCHHHHHHHHHHHHHhCCccHHHHHHHHHcCC--CHHHHHHHHHHHHhhCC
Confidence 444443 455555555555555555555555555555443 34555555555555543
No 6
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=95.42 E-value=0.031 Score=42.00 Aligned_cols=55 Identities=22% Similarity=0.147 Sum_probs=36.5
Q ss_pred HHhhCCChHHHHHHHHHHhcCCChhHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 105 QLRHERDVTAQFDAIRALERFPTTTTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 105 QLq~DrDVvAQ~EAI~aL~k~~s~~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
.+-.|+|..-|..|+.+|++.+.+.++..|.+.+.|+ -..||..|+.+|+++..+
T Consensus 114 ~~l~d~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~d~--~~~vr~~A~~aL~~~~~~ 168 (201)
T 3ltj_A 114 KALKDEDWFVRIAAAFALGEIGDERAVEPLIKALKDE--DGWVRQSAADALGEIGGE 168 (201)
T ss_dssp HHTTCSSHHHHHHHHHHHHHHTCGGGHHHHHHHTTCS--SHHHHHHHHHHHHHHCSH
T ss_pred HHHcCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHcCC--CHHHHHHHHHHHHHhCch
Confidence 3345667777777777777777666777777777654 456777777777776543
No 7
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=95.40 E-value=0.029 Score=42.18 Aligned_cols=51 Identities=24% Similarity=0.182 Sum_probs=26.7
Q ss_pred hCCChHHHHHHHHHHhcCCChhHHHHHHHHhhcCCcchHHHHHHHHHHHhhhh
Q psy13489 108 HERDVTAQFDAIRALERFPTTTTRLALTDTIESERAYVQVRCKAAQALTKVKE 160 (172)
Q Consensus 108 ~DrDVvAQ~EAI~aL~k~~s~~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~ 160 (172)
.|+|..-|..|+.+|++.+.+.+...|.+.+.++ -+.||..|+.+|+++..
T Consensus 86 ~d~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~d~--~~~vr~~a~~aL~~~~~ 136 (201)
T 3ltj_A 86 KDEDGWVRQSAAVALGQIGDERAVEPLIKALKDE--DWFVRIAAAFALGEIGD 136 (201)
T ss_dssp TCSSHHHHHHHHHHHHHHCCGGGHHHHHHHTTCS--SHHHHHHHHHHHHHHTC
T ss_pred cCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHcCC--CHHHHHHHHHHHHHhCC
Confidence 3455555555555555555555555555555432 34555555555555543
No 8
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=94.58 E-value=0.048 Score=43.10 Aligned_cols=50 Identities=16% Similarity=0.118 Sum_probs=23.9
Q ss_pred hCCChHHHHHHHHHHhcCC--ChhHHHHHHHHhhcCCcchHHHHHHHHHHHhhh
Q psy13489 108 HERDVTAQFDAIRALERFP--TTTTRLALTDTIESERAYVQVRCKAAQALTKVK 159 (172)
Q Consensus 108 ~DrDVvAQ~EAI~aL~k~~--s~~~~~~L~r~L~d~~~FygVR~eAA~aLak~a 159 (172)
.|+|..-+..|+.+|+..+ ++.+...|.+.+.|+ -..||..|+.+|++++
T Consensus 169 ~d~~~~vr~~a~~aL~~~~~~~~~~~~~L~~~l~d~--~~~vR~~A~~aL~~~~ 220 (280)
T 1oyz_A 169 KDPNGDVRNWAAFAININKYDNSDIRDCFVEMLQDK--NEEVRIEAIIGLSYRK 220 (280)
T ss_dssp TCSSHHHHHHHHHHHHHHTCCCHHHHHHHHHHTTCS--CHHHHHHHHHHHHHTT
T ss_pred cCCCHHHHHHHHHHHHhhccCcHHHHHHHHHHhcCC--CHHHHHHHHHHHHHhC
Confidence 3444445555555555443 344444555554433 2445555555555544
No 9
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=94.20 E-value=0.15 Score=49.03 Aligned_cols=74 Identities=14% Similarity=0.054 Sum_probs=57.3
Q ss_pred eEEecCCCceeEEEeecCCHHHHHHHHhhCCChHHHHHHHHHHhcC-------------C---ChhHHHHHHHHhhcCCc
Q psy13489 80 WIRLDPEMTIIRSVVIEQPDYQWQYQLRHERDVTAQFDAIRALERF-------------P---TTTTRLALTDTIESERA 143 (172)
Q Consensus 80 WIRiDpd~ewL~~v~~~QP~~Mw~~QLq~DrDVvAQ~EAI~aL~k~-------------~---s~~~~~~L~r~L~d~~~ 143 (172)
|++++++|.-..+++.++++.+|..+|.+|+|+..|.+|++.|++. . ......++..++.++.-
T Consensus 524 ~~~l~r~fs~~~~l~~~~~~~~l~~l~~~~~d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 603 (867)
T 2gtq_A 524 VPSLLRGFSAPVHLNYPYSDDDLLLLLAHDSDAFTRWEAAQTLYRRAVAANLATLSDGVELPKHEKLLAAVEKVISDDLL 603 (867)
T ss_dssp EEEESTTCCSSCEEECCCCHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHCSSS
T ss_pred ceEecCCCCccEEEECCCCHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHhcCcCC
Confidence 6999999999999999999999999999999999999997766542 1 23466777777756543
Q ss_pred chHHHHHHHH
Q psy13489 144 YVQVRCKAAQ 153 (172)
Q Consensus 144 FygVR~eAA~ 153 (172)
-+.|+.++..
T Consensus 604 d~~~~a~~l~ 613 (867)
T 2gtq_A 604 DNAFKALLLG 613 (867)
T ss_dssp CHHHHHHHTC
T ss_pred CHHHHHHHhc
Confidence 5555555443
No 10
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=93.66 E-value=0.12 Score=40.80 Aligned_cols=58 Identities=12% Similarity=0.004 Sum_probs=43.3
Q ss_pred HHHHHHHhhCCChHHHHHHHHHHhcCCChhHHHHHHHHhhcCCcchHHHHHHHHHHHhhhh
Q psy13489 100 YQWQYQLRHERDVTAQFDAIRALERFPTTTTRLALTDTIESERAYVQVRCKAAQALTKVKE 160 (172)
Q Consensus 100 ~Mw~~QLq~DrDVvAQ~EAI~aL~k~~s~~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~ 160 (172)
..+...| .|+|..-|..|+.+|++.+++.+...|.+.+.++ -+.||..|+.+|++++.
T Consensus 26 ~~L~~~L-~~~~~~vr~~A~~~L~~~~~~~~~~~L~~~l~d~--~~~vR~~A~~aL~~l~~ 83 (280)
T 1oyz_A 26 DELFRLL-DDHNSLKRISSARVLQLRGGQDAVRLAIEFCSDK--NYIRRDIGAFILGQIKI 83 (280)
T ss_dssp HHHHHHT-TCSSHHHHHHHHHHHHHHCCHHHHHHHHHHHTCS--SHHHHHHHHHHHHHSCC
T ss_pred HHHHHHH-HcCCHHHHHHHHHHHHccCCchHHHHHHHHHcCC--CHHHHHHHHHHHHHhcc
Confidence 4455666 4678888888888888888877888888888765 45788888888887763
No 11
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=88.90 E-value=0.43 Score=46.47 Aligned_cols=46 Identities=9% Similarity=-0.010 Sum_probs=41.8
Q ss_pred eEEecCCCceeEEEeecCCHHHHHHHHhhCCChHHHHHHHHHHhcC
Q psy13489 80 WIRLDPEMTIIRSVVIEQPDYQWQYQLRHERDVTAQFDAIRALERF 125 (172)
Q Consensus 80 WIRiDpd~ewL~~v~~~QP~~Mw~~QLq~DrDVvAQ~EAI~aL~k~ 125 (172)
|..++++|.-..+++.++++.++..||++|.|..++.||++.|++.
T Consensus 534 ~~sl~r~fsa~v~l~~~~~~~~l~~l~~~d~d~~~r~~a~~~l~~~ 579 (889)
T 3ebh_A 534 IPSLFRGFSAPVYIEDQLTDEERILLLKYDSDAFVRYNSCTNIYMK 579 (889)
T ss_dssp EEEESTTCCSSSEEECCCCHHHHHHHHHHCSCHHHHHHHHHHHHHH
T ss_pred eEEEcCCCCceEEEeCCCCHHHHHHHHhhCCChhHHHHHHHHHHHH
Confidence 4479999999999999999999999999999999999999998643
No 12
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=84.13 E-value=1.5 Score=33.45 Aligned_cols=62 Identities=19% Similarity=0.190 Sum_probs=47.9
Q ss_pred CCHHHHHHHHhhCCChHHHHHHHHHHhcCCC-----------hhHHHHHHHHhhcCCcchHHHHHHHHHHHhhhh
Q psy13489 97 QPDYQWQYQLRHERDVTAQFDAIRALERFPT-----------TTTRLALTDTIESERAYVQVRCKAAQALTKVKE 160 (172)
Q Consensus 97 QP~~Mw~~QLq~DrDVvAQ~EAI~aL~k~~s-----------~~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~ 160 (172)
.+.|.+...+-++.|..-|..|+.+|.+.-+ ..++..|.+.|.+.. ..||..|+.+|+.++.
T Consensus 11 ~~~~~~~~~~L~s~~~~~~~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L~~lL~~~~--~~v~~~a~~~L~~l~~ 83 (252)
T 4db8_A 11 GSELPQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPN--EQILQEALWALSNIAS 83 (252)
T ss_dssp TCSHHHHHHHHHSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHGGGCSC--HHHHHHHHHHHHHHTT
T ss_pred cchHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCchHHHHHHcCcHHHHHHHHcCCC--HHHHHHHHHHHHHHhc
Confidence 3456666666677999999999999965322 135778889998764 8999999999999986
No 13
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=81.98 E-value=2.3 Score=31.48 Aligned_cols=62 Identities=19% Similarity=0.160 Sum_probs=48.7
Q ss_pred CCHHHHHHHHhhCCChHHHHHHHHHHhcCCC--h---------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhh
Q psy13489 97 QPDYQWQYQLRHERDVTAQFDAIRALERFPT--T---------TTRLALTDTIESERAYVQVRCKAAQALTKVKE 160 (172)
Q Consensus 97 QP~~Mw~~QLq~DrDVvAQ~EAI~aL~k~~s--~---------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~ 160 (172)
.+.+.....|-++.|...|.+|+.+|+.... . .++..|.+.|.+. -..||..|+.+|+.++.
T Consensus 11 ~~~~~~l~~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~--~~~v~~~a~~~L~~l~~ 83 (210)
T 4db6_A 11 GSELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIAS 83 (210)
T ss_dssp --CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHTT
T ss_pred cchhHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHHHhc
Confidence 4566777788888999999999999987642 2 2567888888765 57999999999999874
No 14
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=76.69 E-value=4.6 Score=35.97 Aligned_cols=51 Identities=18% Similarity=0.173 Sum_probs=41.5
Q ss_pred hCCChHHHHHHHHHHhcCCChhHHHH----HHHHhhcCCcchHHHHHHHHHHHhhhh
Q psy13489 108 HERDVTAQFDAIRALERFPTTTTRLA----LTDTIESERAYVQVRCKAAQALTKVKE 160 (172)
Q Consensus 108 ~DrDVvAQ~EAI~aL~k~~s~~~~~~----L~r~L~d~~~FygVR~eAA~aLak~a~ 160 (172)
.|+|..-|--|+++|++.+++..... |.+++.+. -..||..||.+|+++..
T Consensus 96 ~~~n~~ir~~AL~~L~~i~~~~~~~~l~~~l~~~L~d~--~~~VRk~A~~al~~i~~ 150 (591)
T 2vgl_B 96 EDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDE--DPYVRKTAAVCVAKLHD 150 (591)
T ss_dssp SSSSHHHHHHHHHHHHTCCSGGGHHHHHHHHHHHSSCS--CHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHcCCC--ChHHHHHHHHHHHHHHh
Confidence 56888999999999999988765544 77777654 67899999999999875
No 15
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=71.20 E-value=6.8 Score=28.84 Aligned_cols=56 Identities=21% Similarity=0.172 Sum_probs=43.7
Q ss_pred HHHHhhCCChHHHHHHHHHHhcCCC--hh---------HHHHHHHHhhcCCcchHHHHHHHHHHHhhhh
Q psy13489 103 QYQLRHERDVTAQFDAIRALERFPT--TT---------TRLALTDTIESERAYVQVRCKAAQALTKVKE 160 (172)
Q Consensus 103 ~~QLq~DrDVvAQ~EAI~aL~k~~s--~~---------~~~~L~r~L~d~~~FygVR~eAA~aLak~a~ 160 (172)
.-++-.+.|...|..|+.+|+.... .. ++..|.+.|.+. -..||..|+.+|+.++.
T Consensus 59 L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~--~~~v~~~a~~~L~~l~~ 125 (210)
T 4db6_A 59 LVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIAS 125 (210)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTTCS--CHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHcCC--cHHHHHHHHHHHHHHHc
Confidence 3444466789999999999998642 21 567888888775 48999999999999974
No 16
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=69.65 E-value=14 Score=30.11 Aligned_cols=59 Identities=19% Similarity=0.142 Sum_probs=46.1
Q ss_pred HHHHHhhCCChHHHHHHHHHHhcCCC-----------hhHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhhh
Q psy13489 102 WQYQLRHERDVTAQFDAIRALERFPT-----------TTTRLALTDTIESERAYVQVRCKAAQALTKVKEIL 162 (172)
Q Consensus 102 w~~QLq~DrDVvAQ~EAI~aL~k~~s-----------~~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~~ 162 (172)
...++-.+++-..+..|+.+|+.... +.+...|.+.+.|+ .+.||..|+.+|++++...
T Consensus 370 ~l~~~l~~~~~~~r~aal~~l~~l~~~~~~~~~~~~l~~~~~~l~~~l~d~--~~~Vr~~a~~~l~~~~~~~ 439 (462)
T 1ibr_B 370 FIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDP--SVVVRDTAAWTVGRICELL 439 (462)
T ss_dssp HHHHHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCTTTTTHHHHHHHGGGCS--CHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHhcCCChHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHhc
Confidence 44455568898889999999887632 23677888888775 5899999999999998763
No 17
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=69.04 E-value=8.6 Score=31.43 Aligned_cols=59 Identities=19% Similarity=0.267 Sum_probs=45.7
Q ss_pred HHHHHHhhCCChHHHHHHHHHHhcCCC-----------hhHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 101 QWQYQLRHERDVTAQFDAIRALERFPT-----------TTTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 101 Mw~~QLq~DrDVvAQ~EAI~aL~k~~s-----------~~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
....-|+.+.|...|.+|+.+|....+ ..++..|.+.+.+. -..||..|+.+|+.++..
T Consensus 68 ~L~~~L~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~--~~~vr~~a~~~L~~l~~~ 137 (450)
T 2jdq_A 68 RFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSE--FEDVQEQAVWALGNIAGD 137 (450)
T ss_dssp HHHHHHTCTTCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCCHHHHHHHHcCC--CHHHHHHHHHHHHHHccC
Confidence 445566555588999999999988643 23677888888764 679999999999998864
No 18
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=68.99 E-value=9.8 Score=28.27 Aligned_cols=54 Identities=26% Similarity=0.266 Sum_probs=43.4
Q ss_pred HHhhCCChHHHHHHHHHHhcCCCh-----------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhh
Q psy13489 105 QLRHERDVTAQFDAIRALERFPTT-----------TTRLALTDTIESERAYVQVRCKAAQALTKVKE 160 (172)
Q Consensus 105 QLq~DrDVvAQ~EAI~aL~k~~s~-----------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~ 160 (172)
++-.+.|...|..|+.+|+..... .++..|.+.+.++ -..||..|+.+|+.++.
T Consensus 51 ~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~~~--~~~v~~~a~~~L~~l~~ 115 (252)
T 4hxt_A 51 KLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTST--DSEVQKEAARALANIAS 115 (252)
T ss_dssp HHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS--SHHHHHHHHHHHHHHTT
T ss_pred HHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHcCC--CHHHHHHHHHHHHHHHc
Confidence 444567889999999999987543 3678888888764 48999999999999984
No 19
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=68.81 E-value=7.7 Score=34.96 Aligned_cols=51 Identities=16% Similarity=0.062 Sum_probs=43.0
Q ss_pred hCCChHHHHHHHHHHhcCCChhH----HHHHHHHhhcCCcchHHHHHHHHHHHhhhh
Q psy13489 108 HERDVTAQFDAIRALERFPTTTT----RLALTDTIESERAYVQVRCKAAQALTKVKE 160 (172)
Q Consensus 108 ~DrDVvAQ~EAI~aL~k~~s~~~----~~~L~r~L~d~~~FygVR~eAA~aLak~a~ 160 (172)
.|++..-+.-|+++|+..+++.. ...+.+.+.+.+ .-||..||.+|+++..
T Consensus 117 ~~~n~~vr~lAL~~L~~i~~~~~~~~l~~~l~~~L~~~~--~~VRk~A~~al~~l~~ 171 (618)
T 1w63_A 117 NHSTQFVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSN--SYLRKKAALCAVHVIR 171 (618)
T ss_dssp SCSSSHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHSCC--HHHHHHHHHHHHHHHH
T ss_pred CCCCHhHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCC--HHHHHHHHHHHHHHHH
Confidence 46888999999999999998765 677788887764 6799999999999875
No 20
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=65.84 E-value=8.9 Score=28.49 Aligned_cols=57 Identities=23% Similarity=0.208 Sum_probs=43.8
Q ss_pred HHHHHhhCCChHHHHHHHHHHhcCCC--h---------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 102 WQYQLRHERDVTAQFDAIRALERFPT--T---------TTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 102 w~~QLq~DrDVvAQ~EAI~aL~k~~s--~---------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
....| .+.|...|.+|+.+|....+ + .++..|.+.+.+.. -.||..|+.+|+.++..
T Consensus 7 L~~~L-~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~--~~v~~~a~~~L~~l~~~ 74 (252)
T 4hxt_A 7 LVKLL-TSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTD--SEVQKEAARALANIASG 74 (252)
T ss_dssp HHHHT-TCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSC--HHHHHHHHHHHHHHTTS
T ss_pred HHHHH-cCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCCC--HHHHHHHHHHHHHHHcC
Confidence 34455 44678899999999987632 2 26788888888754 89999999999998864
No 21
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=65.53 E-value=11 Score=32.80 Aligned_cols=60 Identities=13% Similarity=0.172 Sum_probs=46.1
Q ss_pred HHHHHHHHhhCCChHHHHHHHHHHhcC------CCh------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhh
Q psy13489 99 DYQWQYQLRHERDVTAQFDAIRALERF------PTT------TTRLALTDTIESERAYVQVRCKAAQALTKVKE 160 (172)
Q Consensus 99 ~~Mw~~QLq~DrDVvAQ~EAI~aL~k~------~s~------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~ 160 (172)
-...+..|.. .|...|++|+.++.|. |.. .++..|.+.|... -...|+.+||.+|+.++.
T Consensus 59 i~~~v~~l~s-~d~~~q~~a~~~~rklls~e~~ppi~~ii~~G~ip~LV~lL~~~-~~~~lq~~Aa~aL~nias 130 (510)
T 3ul1_B 59 VEDIVKGINS-NNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKT-DCSPIQFESAWALTNIAS 130 (510)
T ss_dssp HHHHHHHHTS-SCHHHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHTTCT-TCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcC-CCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHCCC-CCHHHHHHHHHHHHHHhc
Confidence 4567888854 8999999999998874 221 1467888888653 457899999999999874
No 22
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=65.50 E-value=14 Score=27.78 Aligned_cols=55 Identities=22% Similarity=0.158 Sum_probs=43.6
Q ss_pred HHhhCCChHHHHHHHHHHhcCCC--h---------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 105 QLRHERDVTAQFDAIRALERFPT--T---------TTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 105 QLq~DrDVvAQ~EAI~aL~k~~s--~---------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
++-.+.+...|..|+.+|+.... + .++..|.+.|.++ -..||..|+.+|+.++..
T Consensus 61 ~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~--~~~v~~~a~~~L~~l~~~ 126 (252)
T 4db8_A 61 QLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIASG 126 (252)
T ss_dssp HGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCS--CHHHHHHHHHHHHHHTTS
T ss_pred HHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHHhhcC
Confidence 44456778899999999998754 2 2678888888775 579999999999998754
No 23
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=62.87 E-value=9.4 Score=33.22 Aligned_cols=60 Identities=17% Similarity=0.130 Sum_probs=47.0
Q ss_pred HHHHHHHhhCCChHHHHHHHHHHhcCCC--h---------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 100 YQWQYQLRHERDVTAQFDAIRALERFPT--T---------TTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 100 ~Mw~~QLq~DrDVvAQ~EAI~aL~k~~s--~---------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
-.++.-|+.+.+..-|.+|+.+|....+ . .++..|.+.|.+. .-.||..|+.+|+.++..
T Consensus 103 p~LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~lL~s~--~~~v~e~A~~aL~nLa~d 173 (510)
T 3ul1_B 103 PKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASP--HAHISEQAVWALGNIAGD 173 (510)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHcCC--CHHHHHHHHHHHHHHHhC
Confidence 3456667777788999999999988633 2 1577888888764 689999999999999864
No 24
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=60.01 E-value=11 Score=37.19 Aligned_cols=57 Identities=16% Similarity=0.044 Sum_probs=46.8
Q ss_pred HHHHhhCCChHHHHHHHHHHhcC----CChhHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 103 QYQLRHERDVTAQFDAIRALERF----PTTTTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 103 ~~QLq~DrDVvAQ~EAI~aL~k~----~s~~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
...|.++.|...+.-|+.+|+.. |...++..|.+...|.+.| ||..|+.||+.+.-.
T Consensus 617 v~~L~~~~d~~VR~gAalALGli~aGn~~~~aid~L~~L~~D~d~~--Vrq~Ai~ALG~Ig~g 677 (963)
T 4ady_A 617 VQLLSKSHNAHVRCGTAFALGIACAGKGLQSAIDVLDPLTKDPVDF--VRQAAMIALSMILIQ 677 (963)
T ss_dssp TTTGGGCSCHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHTCSSHH--HHHHHHHHHHHHSTT
T ss_pred HHHHHhcCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHHccCCCHH--HHHHHHHHHHHHhcC
Confidence 34566788999999999999875 5567899999999887655 999999999998854
No 25
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=58.99 E-value=20 Score=27.51 Aligned_cols=56 Identities=20% Similarity=0.245 Sum_probs=43.3
Q ss_pred HHHHhhCCChHHHHHHHHHHhcC-----CCh-------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 103 QYQLRHERDVTAQFDAIRALERF-----PTT-------TTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 103 ~~QLq~DrDVvAQ~EAI~aL~k~-----~s~-------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
...| .+++...+.+++..|+.. +.. ..+..|..++.| ..+.||..|..+|+.++..
T Consensus 139 ~~~l-~~~~~~vr~~~l~~l~~~l~~~~~~~~~~~~l~~l~p~l~~~l~D--~~~~VR~~A~~~l~~l~~~ 206 (242)
T 2qk2_A 139 VESL-SNKNPSVKSETALFIARALTRTQPTALNKKLLKLLTTSLVKTLNE--PDPTVRDSSAEALGTLIKL 206 (242)
T ss_dssp HHHT-TCSCHHHHHHHHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHTS--SCHHHHHHHHHHHHHHHHH
T ss_pred HHHH-cCCChHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHhcC--CChHHHHHHHHHHHHHHHH
Confidence 3445 468999999999998773 211 357788888876 4899999999999998765
No 26
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=57.78 E-value=14 Score=31.60 Aligned_cols=61 Identities=16% Similarity=0.121 Sum_probs=46.8
Q ss_pred HHHHHHHHhhCCChHHHHHHHHHHhcCCC----h--------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 99 DYQWQYQLRHERDVTAQFDAIRALERFPT----T--------TTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 99 ~~Mw~~QLq~DrDVvAQ~EAI~aL~k~~s----~--------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
.......|.. .|...|.+|+.+|.+.-+ + .++..|.+.|.+. ....||.+|+.+|+.++..
T Consensus 76 l~~lv~~L~s-~~~~~~~~A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~lL~~~-~~~~v~~~A~~~L~~l~~~ 148 (528)
T 4b8j_A 76 LPAMIGGVYS-DDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTRE-DFPQLQFEAAWALTNIASG 148 (528)
T ss_dssp HHHHHHHHTS-SCHHHHHHHHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHHHTCT-TCHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHcC-CCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHhCCC-CCHHHHHHHHHHHHHHhCC
Confidence 4567777754 689999999999977511 1 2578888888764 3589999999999998864
No 27
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=56.42 E-value=28 Score=31.83 Aligned_cols=61 Identities=11% Similarity=0.045 Sum_probs=47.4
Q ss_pred HHHHHHHHhhCCChHHHHHHHHHHhcCCCh----------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 99 DYQWQYQLRHERDVTAQFDAIRALERFPTT----------TTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 99 ~~Mw~~QLq~DrDVvAQ~EAI~aL~k~~s~----------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
-.-...++-.+.+...+..|+.+|+..... .....|.+.+.|+ ...||..|+.+|++++..
T Consensus 360 l~~~l~~~l~~~~~~~R~aa~~alg~i~~~~~~~~~~~l~~~l~~l~~~l~d~--~~~Vr~~a~~~l~~l~~~ 430 (852)
T 4fdd_A 360 ILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDK--KALVRSITCWTLSRYAHW 430 (852)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHTTTTTHHHHGGGHHHHHHHHHHHTTCS--SHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHcCCC--CHHHHHHHHHHHHHHHHH
Confidence 344555555778999999999999988542 3566777778664 789999999999998864
No 28
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=56.23 E-value=16 Score=31.32 Aligned_cols=60 Identities=18% Similarity=0.117 Sum_probs=45.5
Q ss_pred HHHHHHHhhCCChHHHHHHHHHHhcCCCh-----------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 100 YQWQYQLRHERDVTAQFDAIRALERFPTT-----------TTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 100 ~Mw~~QLq~DrDVvAQ~EAI~aL~k~~s~-----------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
..+..-|..+.|...|.+|+.+|....+. .++..|.+.|.+. -..||..|+.+|+.++..
T Consensus 133 ~~Lv~~L~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~--~~~vr~~A~~aL~~l~~~ 203 (530)
T 1wa5_B 133 PRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTG--SVEVKEQAIWALGNVAGD 203 (530)
T ss_dssp HHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHC--CHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHcCC--CHHHHHHHHHHHHHHhCC
Confidence 34455554444889999999999987551 2467888888764 689999999999999854
No 29
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=54.63 E-value=18 Score=31.41 Aligned_cols=59 Identities=17% Similarity=0.171 Sum_probs=46.2
Q ss_pred HHHHHHhhCCChHHHHHHHHHHhcCCC--h---------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 101 QWQYQLRHERDVTAQFDAIRALERFPT--T---------TTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 101 Mw~~QLq~DrDVvAQ~EAI~aL~k~~s--~---------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
.++.-|..+.+..-|.+|+.+|....+ . .++..|...+.+ ....||..|+.+|+.++..
T Consensus 123 ~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~~~~~~~vv~~Gaip~Lv~LL~s--~~~~v~e~A~~aL~nLa~~ 192 (529)
T 3tpo_A 123 KFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLAS--PHAHISEQAVWALGNIAGA 192 (529)
T ss_dssp HHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTC--SCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcC--CCHHHHHHHHHHHHHHhcc
Confidence 456677777889999999999988633 2 156778887765 4689999999999999864
No 30
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=54.44 E-value=19 Score=30.69 Aligned_cols=61 Identities=23% Similarity=0.118 Sum_probs=46.5
Q ss_pred HHHHHHHHhhCCChHHHHHHHHHHhcCCCh-----------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 99 DYQWQYQLRHERDVTAQFDAIRALERFPTT-----------TTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 99 ~~Mw~~QLq~DrDVvAQ~EAI~aL~k~~s~-----------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
.......|..+.+...|.+|+.+|....+. .++..|.+.|.+. ...||..|+.+|+.++..
T Consensus 119 v~~Lv~lL~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~L~~lL~~~--~~~v~~~a~~aL~~l~~~ 190 (528)
T 4b8j_A 119 VPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSS--SDDVREQAVWALGNVAGD 190 (528)
T ss_dssp HHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCCcHHHHHHHhcCC--CHHHHHHHHHHHHHHhCC
Confidence 344566676554589999999999886542 2677888888764 679999999999999754
No 31
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=52.88 E-value=19 Score=30.91 Aligned_cols=61 Identities=20% Similarity=0.155 Sum_probs=46.4
Q ss_pred CHHHHHHHHhhCCChHHHHHHHHHHhcCCC----h--------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhh
Q psy13489 98 PDYQWQYQLRHERDVTAQFDAIRALERFPT----T--------TTRLALTDTIESERAYVQVRCKAAQALTKVKE 160 (172)
Q Consensus 98 P~~Mw~~QLq~DrDVvAQ~EAI~aL~k~~s----~--------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~ 160 (172)
-.......|+. .|...|..|+.+|.+.-+ + .++..|.+.|.+. .-..||.+||.+|+.++.
T Consensus 88 ~i~~lv~~L~s-~~~~~~~~A~~~L~~ll~~~~~~~~~~~~~~g~i~~Lv~~L~~~-~~~~v~~~A~~~L~~l~~ 160 (530)
T 1wa5_B 88 ELPQMTQQLNS-DDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMREN-QPEMLQLEAAWALTNIAS 160 (530)
T ss_dssp CHHHHHHHHSC-SSHHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTSTT-SCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcC-CCHHHHHHHHHHHHHHhCCCCCccHHHHHHCCCHHHHHHHhCCC-CCHHHHHHHHHHHHHHhC
Confidence 35556677765 589999999999987522 1 2577888888654 368999999999999886
No 32
>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1
Probab=52.62 E-value=11 Score=36.80 Aligned_cols=65 Identities=15% Similarity=0.107 Sum_probs=50.8
Q ss_pred CCHHHHHHHHhhCCChHHHHHHHHHHhcCCChhHHHHHHHHhhc-----CCcchHHHHHHHHHHHhhhhh
Q psy13489 97 QPDYQWQYQLRHERDVTAQFDAIRALERFPTTTTRLALTDTIES-----ERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 97 QP~~Mw~~QLq~DrDVvAQ~EAI~aL~k~~s~~~~~~L~r~L~d-----~~~FygVR~eAA~aLak~a~~ 161 (172)
+|-.....+.....|-.-++-++++|+..+.+.+...|.++|.+ ...+-+||.+|..||-+++..
T Consensus 439 ~~i~~~l~~~~~~~~~~~~~~~LkaLGN~g~p~~l~~l~~~l~~~~~~~~~~~~rvr~aAi~ALr~~~~~ 508 (1056)
T 1lsh_A 439 QPLHDLLSQSSDRAKEEEIVLALKALGNAGQPNSIKKIQRFLPGQGKSLDEYSTRVQAEAIMALRNIAKR 508 (1056)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCGGGHHHHHTTSTTSSSCCCCSCHHHHHHHHHTTTTGGGT
T ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhccCChhHHHHHHHhhcCccccccccchHHHHHHHHHHHHhhhh
Confidence 33333333333557888899999999999999999999999864 346889999999999999875
No 33
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=51.83 E-value=14 Score=31.16 Aligned_cols=55 Identities=16% Similarity=0.141 Sum_probs=36.0
Q ss_pred HHHhhCCChHHHHHHHHHHhcCC----C----hhHHHHHHHHhhcCCcchHHHHHHHHHHHhhhh
Q psy13489 104 YQLRHERDVTAQFDAIRALERFP----T----TTTRLALTDTIESERAYVQVRCKAAQALTKVKE 160 (172)
Q Consensus 104 ~QLq~DrDVvAQ~EAI~aL~k~~----s----~~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~ 160 (172)
.++-.|+|..-|..|+++|++.. . ......|...+.|+ .+.||..|+.+|+.++.
T Consensus 170 ~~l~~d~~~~VR~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~--~~~vr~~a~~~l~~l~~ 232 (588)
T 1b3u_A 170 RNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDE--QDSVRLLAVEACVNIAQ 232 (588)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHHHHTSCHHHHHHTHHHHHHHHHTCS--CHHHHTTHHHHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHhcHHhHHHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHH
Confidence 35567888888888988888752 2 12344555555554 46777777777776654
No 34
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=50.96 E-value=27 Score=28.41 Aligned_cols=54 Identities=17% Similarity=0.195 Sum_probs=42.0
Q ss_pred HHhhCCChHHHHHHHHHHhcCCCh-----------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhh
Q psy13489 105 QLRHERDVTAQFDAIRALERFPTT-----------TTRLALTDTIESERAYVQVRCKAAQALTKVKE 160 (172)
Q Consensus 105 QLq~DrDVvAQ~EAI~aL~k~~s~-----------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~ 160 (172)
++-.++|...|..|+.+|+..... .+...|.+.+.+. -..||.+|+.+|+.++.
T Consensus 241 ~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~--~~~vr~~a~~~L~~l~~ 305 (450)
T 2jdq_A 241 ELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSSP--KESIKKEACWTISNITA 305 (450)
T ss_dssp HHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHTTCS--SHHHHHHHHHHHHHHTT
T ss_pred HHHCCCchhHHHHHHHHHHHHhhCChHHHHHHHHCccHHHHHHHHcCC--CHHHHHHHHHHHHHHHc
Confidence 344578889999999999876432 2567788888764 58999999999999874
No 35
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=50.60 E-value=18 Score=30.54 Aligned_cols=55 Identities=13% Similarity=0.166 Sum_probs=32.7
Q ss_pred HHhhCCChHHHHHHHHHHhcCCC--------hhHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 105 QLRHERDVTAQFDAIRALERFPT--------TTTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 105 QLq~DrDVvAQ~EAI~aL~k~~s--------~~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
++..|++..-|..|+++|+.... ......|...+.|+ -+.||..|+.+|+.+...
T Consensus 249 ~~~~d~~~~vR~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~l~d~--~~~vr~~a~~~l~~~~~~ 311 (588)
T 1b3u_A 249 QAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDC--EAEVRAAASHKVKEFCEN 311 (588)
T ss_dssp HHHTCSSHHHHHHHHHTHHHHHHHHCHHHHHHTHHHHHHHHHTCS--SHHHHHHHHHHHHHHHHT
T ss_pred HHccCCCHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHhCCC--cHHHHHHHHHHHHHHHHH
Confidence 44566666666667666665432 12345555555543 467777777777776653
No 36
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=48.15 E-value=34 Score=26.15 Aligned_cols=59 Identities=22% Similarity=0.292 Sum_probs=45.5
Q ss_pred HHHHHhhCCChHHHHHHHHHHhcC----CC------hhHHHHHHHHhh-cCCcchHHHHHHHHHHHhhhhhhh
Q psy13489 102 WQYQLRHERDVTAQFDAIRALERF----PT------TTTRLALTDTIE-SERAYVQVRCKAAQALTKVKEILV 163 (172)
Q Consensus 102 w~~QLq~DrDVvAQ~EAI~aL~k~----~s------~~~~~~L~r~L~-d~~~FygVR~eAA~aLak~a~~~~ 163 (172)
+...+ +|+|.--+.+|+..|... +. ...+..|.+.+. | ....||..|+.+|+.++....
T Consensus 20 l~~~l-~s~~w~~R~~a~~~L~~l~~~~~~~~~~~~~~i~~~L~~~l~kd--~~~~V~~~a~~~l~~la~~l~ 89 (242)
T 2qk2_A 20 FYDKL-EEKKWTLRKESLEVLEKLLTDHPKLENGEYGALVSALKKVITKD--SNVVLVAMAGKCLALLAKGLA 89 (242)
T ss_dssp HHHHH-TCSSHHHHHHHHHHHHHHHHHCSSBCCCCCHHHHHHHHHHHHHC--SCHHHHHHHHHHHHHHHHHHG
T ss_pred HHhhh-ccCCHHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHh
Confidence 55566 689999999999888654 21 246888888885 5 478999999999999997643
No 37
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=47.76 E-value=35 Score=29.59 Aligned_cols=60 Identities=12% Similarity=0.130 Sum_probs=44.9
Q ss_pred HHHHHHHHhhCCChHHHHHHHHHHhcC----CCh--------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhh
Q psy13489 99 DYQWQYQLRHERDVTAQFDAIRALERF----PTT--------TTRLALTDTIESERAYVQVRCKAAQALTKVKE 160 (172)
Q Consensus 99 ~~Mw~~QLq~DrDVvAQ~EAI~aL~k~----~s~--------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~ 160 (172)
....+..|.. .|...|++|++++.+. ..+ .++..|.+.|... -...++.+||.+|+.++.
T Consensus 78 l~~lv~~l~s-~d~~~q~~a~~~~rklLs~~~~~~i~~ii~~G~ip~Lv~lL~~~-~~~~~q~~Aa~aL~nia~ 149 (529)
T 3tpo_A 78 VEDIVKGINS-NNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKT-DCSPIQFESAWALTNIAS 149 (529)
T ss_dssp HHHHHHHHTS-SCHHHHHHHHHHHHHHHTSSSCCCHHHHHHTTHHHHHHHHHTCT-TCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcC-CCHHHHHHHHHHHHHHHcCCCCchHHHHHHCCCHHHHHHHHcCC-CCHHHHHHHHHHHHHHHc
Confidence 3456777754 8999999999999763 111 2466788888643 468899999999999975
No 38
>1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5
Probab=46.59 E-value=5.8 Score=32.51 Aligned_cols=43 Identities=12% Similarity=0.072 Sum_probs=24.6
Q ss_pred HHhhCCChHHHHHHHHHHhcCCChhHHHHHHHHhhcCCcchHHHHHHHHHHH
Q psy13489 105 QLRHERDVTAQFDAIRALERFPTTTTRLALTDTIESERAYVQVRCKAAQALT 156 (172)
Q Consensus 105 QLq~DrDVvAQ~EAI~aL~k~~s~~~~~~L~r~L~d~~~FygVR~eAA~aLa 156 (172)
.|-.|+|..-+..|+..| ....|...+.| ..|.||..||.+|+
T Consensus 177 ~ll~D~d~~VR~aaa~~l-------~~~~L~~Ll~D--~d~~VR~~aa~~l~ 219 (244)
T 1lrv_A 177 LMTQDPEPEVRRIVASRL-------RGDDLLELLHD--PDWTVRLAAVEHAS 219 (244)
T ss_dssp GSTTCSSHHHHHHHHHHC-------CGGGGGGGGGC--SSHHHHHHHHHHSC
T ss_pred HHHcCCCHHHHHHHHHhC-------CHHHHHHHHcC--CCHHHHHHHHHcCC
Confidence 455566666666666553 11334444554 36777777777765
No 39
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=44.42 E-value=8.6 Score=36.25 Aligned_cols=79 Identities=10% Similarity=0.034 Sum_probs=54.4
Q ss_pred eeEEecCCCceeEEEeecCCHHHHHHHHhh--CCChHHH---HHHHHHHhcCCChh--HHHHHHHHhhcCCcchHHHHHH
Q psy13489 79 LWIRLDPEMTIIRSVVIEQPDYQWQYQLRH--ERDVTAQ---FDAIRALERFPTTT--TRLALTDTIESERAYVQVRCKA 151 (172)
Q Consensus 79 lWIRiDpd~ewL~~v~~~QP~~Mw~~QLq~--DrDVvAQ---~EAI~aL~k~~s~~--~~~~L~r~L~d~~~FygVR~eA 151 (172)
.||.++++..=..+|.. ++..|..-+++ .=++..| +..+-+|++.+... ..-.|...|.++ ..|.|...|
T Consensus 472 ~~i~~N~~~~gyyrv~Y--d~~~~~~l~~~l~~i~~~~Ra~li~D~~~l~~~g~~~~~~~l~l~~~l~~E-~~~~~w~~~ 548 (780)
T 1z5h_A 472 GLIKINADSAGFYRVLY--DDATFSDVMGHYRDLSPLDRIGLVDDLFAFLLSGHIDPETYRQRIRNFFDD-EDHNVITAI 548 (780)
T ss_dssp TEEEESGGGCSSSEEEC--CHHHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHGGGTTC-CCHHHHHHH
T ss_pred ceEEEeCCCCEEEEEEC--CHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhccC-CcHHHHHHH
Confidence 78888888877776654 56677664432 3477777 66677777766543 344455677776 589999999
Q ss_pred HHHHHhhhh
Q psy13489 152 AQALTKVKE 160 (172)
Q Consensus 152 A~aLak~a~ 160 (172)
...|..+..
T Consensus 549 ~~~l~~~~~ 557 (780)
T 1z5h_A 549 VGQMEYLRM 557 (780)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 998887654
No 40
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=43.96 E-value=7.7 Score=37.58 Aligned_cols=28 Identities=25% Similarity=0.250 Sum_probs=23.2
Q ss_pred HHHHHHhhhhHHHHHHHhhhchhhhhhh
Q psy13489 5 YLDIMRKKAHLMIRMLEHRIGFELILQL 32 (172)
Q Consensus 5 ~~~~~~~k~hl~~r~~e~r~~~e~~lq~ 32 (172)
|..+.-.||.+|+|||+..+|.|.|.+.
T Consensus 397 f~~i~Y~KGa~VLrML~~~lG~e~F~~g 424 (891)
T 3b34_A 397 YTLTVYEKGAEVIRMIHTLLGEENFQKG 424 (891)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHHHHCHHHHHHH
Confidence 3446678999999999999999887763
No 41
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}
Probab=43.94 E-value=11 Score=34.39 Aligned_cols=25 Identities=24% Similarity=0.295 Sum_probs=21.2
Q ss_pred HHHHhhhhHHHHHHHhhhchhhhhh
Q psy13489 7 DIMRKKAHLMIRMLEHRIGFELILQ 31 (172)
Q Consensus 7 ~~~~~k~hl~~r~~e~r~~~e~~lq 31 (172)
.+.-.||.+|+|||++.+|.|.|.+
T Consensus 383 ~i~Y~KGa~vl~mL~~~lG~e~F~~ 407 (605)
T 3cia_A 383 GVPYVKGQLFLMYLEEKFGRERFDA 407 (605)
T ss_dssp SHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred ccchhHHHHHHHHHHHHhChHHHHH
Confidence 3456899999999999999887765
No 42
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein, metal-binding, metalloprotease, protease, hydrolase, adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB: 2yd0_A* 3qnf_A* 3mdj_A*
Probab=43.50 E-value=10 Score=36.28 Aligned_cols=82 Identities=15% Similarity=0.150 Sum_probs=50.1
Q ss_pred CceeEEecCCCceeEEEeecCCHH-HHHHHHhhCC---ChHHH---HHHHHHHhcCCChhH--HHHHHHHhhcCCcchHH
Q psy13489 77 PVLWIRLDPEMTIIRSVVIEQPDY-QWQYQLRHER---DVTAQ---FDAIRALERFPTTTT--RLALTDTIESERAYVQV 147 (172)
Q Consensus 77 p~lWIRiDpd~ewL~~v~~~QP~~-Mw~~QLq~Dr---DVvAQ---~EAI~aL~k~~s~~~--~~~L~r~L~d~~~FygV 147 (172)
+..||.++++..=..+|..+...+ ....+|..+. ++..+ +..+-+|+..+...+ .--|.+.|.++. =|-|
T Consensus 549 ~~~~i~~N~~~~gyyrV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~-~~~~ 627 (897)
T 2xdt_A 549 EVEWIKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHET-EIMP 627 (897)
T ss_dssp CCSCEEESGGGCSSCEEEECTTHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHTTTSSCHHHHHHHHGGGGGCC-CHHH
T ss_pred CCceEEECCCceEEEEEEcCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCC-cHHH
Confidence 457888888888778888776544 4566787665 55444 455667777665432 223446666663 4555
Q ss_pred HHHHHHHHHhhh
Q psy13489 148 RCKAAQALTKVK 159 (172)
Q Consensus 148 R~eAA~aLak~a 159 (172)
-..|...|..+.
T Consensus 628 w~~~~~~l~~l~ 639 (897)
T 2xdt_A 628 VFQGLNELIPMY 639 (897)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555655555544
No 43
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=43.23 E-value=8.3 Score=37.09 Aligned_cols=28 Identities=21% Similarity=0.202 Sum_probs=23.2
Q ss_pred HHHHHHhhhhHHHHHHHhhhchhhhhhh
Q psy13489 5 YLDIMRKKAHLMIRMLEHRIGFELILQL 32 (172)
Q Consensus 5 ~~~~~~~k~hl~~r~~e~r~~~e~~lq~ 32 (172)
|..+.-.||.+|+|||+..+|.|.|.+.
T Consensus 372 f~~i~Y~KGa~vl~mL~~~lG~e~F~~g 399 (867)
T 2gtq_A 372 YTMTVYEKGAEVVRMYHTLLGEEGFQKG 399 (867)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhHHHHHHHHHHHHHCHHHHHHH
Confidence 3456678999999999999999887663
No 44
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*
Probab=42.38 E-value=11 Score=34.54 Aligned_cols=25 Identities=16% Similarity=0.067 Sum_probs=21.1
Q ss_pred HHHHhhhhHHHHHHHhhhch-hhhhh
Q psy13489 7 DIMRKKAHLMIRMLEHRIGF-ELILQ 31 (172)
Q Consensus 7 ~~~~~k~hl~~r~~e~r~~~-e~~lq 31 (172)
.+.-.||.+|+||||+.+|. |.|.+
T Consensus 387 ~i~Y~KGa~vL~mL~~~lG~~e~F~~ 412 (632)
T 2xq0_A 387 TVPYEKGFNLLFHLETILGGKAEFDP 412 (632)
T ss_dssp SHHHHHHHHHHHHHHHHTTSHHHHHH
T ss_pred chhhHHHHHHHHHHHHHhCChHHHHH
Confidence 45568999999999999998 77655
No 45
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=41.54 E-value=53 Score=29.28 Aligned_cols=58 Identities=17% Similarity=0.118 Sum_probs=43.5
Q ss_pred HHHHHhhCCChHHHHHHHHHHhcCCCh-----------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 102 WQYQLRHERDVTAQFDAIRALERFPTT-----------TTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 102 w~~QLq~DrDVvAQ~EAI~aL~k~~s~-----------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
...+.-.|++...|..|+.+|+..... .....|...+.|+ .+.||..|+.+|+++...
T Consensus 370 ~l~~~l~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~~~~~l~~l~~~l~d~--~~~vr~~a~~~l~~~~~~ 438 (876)
T 1qgr_A 370 FIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDP--SVVVRDTAAWTVGRICEL 438 (876)
T ss_dssp HHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHHHTCS--SHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccCCChHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHh
Confidence 344555688999999999999876431 1355667777664 589999999999998865
No 46
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=40.63 E-value=62 Score=26.93 Aligned_cols=59 Identities=15% Similarity=0.039 Sum_probs=45.5
Q ss_pred HHHHHHhhCCChHHHHHHHHHHhcCCCh----------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 101 QWQYQLRHERDVTAQFDAIRALERFPTT----------TTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 101 Mw~~QLq~DrDVvAQ~EAI~aL~k~~s~----------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
.....|+.+.|...|..|+.+|.+.... .++..|.+.+.++. ..||..|+.+|++++..
T Consensus 63 ~Lv~~L~~~~~~~~~~~a~~~L~~ls~~~~~~~~i~~~g~i~~L~~lL~~~~--~~v~~~a~~~L~~l~~~ 131 (529)
T 1jdh_A 63 AIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPV--DSVLFYAITTLHNLLLH 131 (529)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHTTCSC--HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHcCchhHHHHHHcCCHHHHHHHHcCCC--HHHHHHHHHHHHHHhcC
Confidence 3455666667888999999999885432 25778888887653 78999999999998764
No 47
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=38.12 E-value=37 Score=31.50 Aligned_cols=59 Identities=15% Similarity=0.073 Sum_probs=46.1
Q ss_pred HHHHHHhhCCChHHHHHHHHHHhcCCC----------hhHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 101 QWQYQLRHERDVTAQFDAIRALERFPT----------TTTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 101 Mw~~QLq~DrDVvAQ~EAI~aL~k~~s----------~~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
.....|+.+.|...|..|+.+|.+... ..++..|.+.|.+. --.||..|+.+|..++..
T Consensus 196 ~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~~~~~~~~i~~~g~I~~Lv~lL~~~--~~~v~~~A~~aL~nLa~~ 264 (780)
T 2z6g_A 196 AIVRTMQNTNDVETARCTSGTLHNLSHHREGLLAIFKSGGIPALVNMLGSP--VDSVLFHAITTLHNLLLH 264 (780)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHhCCchhHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHHHhCC
Confidence 445677777899999999999987422 13677888888765 478999999999999764
No 48
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=37.55 E-value=1.2e+02 Score=24.01 Aligned_cols=60 Identities=15% Similarity=0.142 Sum_probs=45.8
Q ss_pred HHHHHHhhCCChHHHHHHHHHHhc-CC---------C---hhHHHHHHHHh-hcCCcchHHHHHHHHHHHhhhhhhh
Q psy13489 101 QWQYQLRHERDVTAQFDAIRALER-FP---------T---TTTRLALTDTI-ESERAYVQVRCKAAQALTKVKEILV 163 (172)
Q Consensus 101 Mw~~QLq~DrDVvAQ~EAI~aL~k-~~---------s---~~~~~~L~r~L-~d~~~FygVR~eAA~aLak~a~~~~ 163 (172)
-|..+| .+.+-.-+.+|+..|.. .- . ...+..|...+ .| .-..||..|+.+|+.+++...
T Consensus 20 ~f~~~l-~s~~w~eRk~al~~L~~~~~~~~~~i~~~~~~~~~~~~~L~~~l~~D--~n~~v~~~A~~al~~la~~l~ 93 (249)
T 2qk1_A 20 DFQERI-TSSKWKDRVEALEEFWDSVLSQTKKLKSTSQNYSNLLGIYGHIIQKD--ANIQAVALAAQSVELICDKLK 93 (249)
T ss_dssp THHHHH-TCSSHHHHHHHHHHHHHHTGGGCCCBCCTTCCCHHHHHHHHHHHHHC--SCHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHh-hcCCHHHHHHHHHHHHHHHHhcCCccccCcccHHHHHHHHHHHhccC--CCHHHHHHHHHHHHHHHHhcc
Confidence 467777 45899999999988888 51 1 24677888888 44 457899999999999997644
No 49
>3jxy_A Alkylpurine DNA glycosylase ALKD; heat repeat, DNA binding, DNA glycosylase, DNA alkylation, L complex, hydrolase-DNA complex; HET: DNA; 1.50A {Bacillus cereus} SCOP: a.118.1.0 PDB: 3jx7_A* 3bvs_A 3jy1_A* 3jxz_A*
Probab=36.85 E-value=26 Score=27.89 Aligned_cols=42 Identities=5% Similarity=0.064 Sum_probs=34.1
Q ss_pred HHHHHhcCCChhHHHHHHHHhhcCCcchHHHHHHHHHHHhhh
Q psy13489 118 AIRALERFPTTTTRLALTDTIESERAYVQVRCKAAQALTKVK 159 (172)
Q Consensus 118 AI~aL~k~~s~~~~~~L~r~L~d~~~FygVR~eAA~aLak~a 159 (172)
-...|.....+.......+.+.+...|+|||+-.-+.|||--
T Consensus 9 i~~~L~~~ad~~~a~~~~~~~k~~~~~lGVr~P~lR~laK~~ 50 (232)
T 3jxy_A 9 LQEHFTAHQNPEKAEPMARYMKNHFLFLGIQTPERRQLLKDI 50 (232)
T ss_dssp HHHHHHTTCCHHHHHHHHHHTTTSSBCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHCCCCCeeeccChHHHHHHHHHH
Confidence 356778888888888888888887789999998888888743
No 50
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=35.91 E-value=80 Score=31.22 Aligned_cols=59 Identities=12% Similarity=0.049 Sum_probs=38.1
Q ss_pred HHHHHHHHhhCCChHHHHHHHHHHh----cCCChhHHHHHHH-HhhcCCcchHHHHHHHHHHHhhh
Q psy13489 99 DYQWQYQLRHERDVTAQFDAIRALE----RFPTTTTRLALTD-TIESERAYVQVRCKAAQALTKVK 159 (172)
Q Consensus 99 ~~Mw~~QLq~DrDVvAQ~EAI~aL~----k~~s~~~~~~L~r-~L~d~~~FygVR~eAA~aLak~a 159 (172)
-.+.+..|..+.|...+.-|+-+++ .-+...++..|.. +..+..-+ ||..|+.+||.+.
T Consensus 543 ~~~li~~L~~~~dp~vRygaa~alglAyaGTGn~~aIq~LL~~~~~d~~d~--VRraAViaLGlI~ 606 (963)
T 4ady_A 543 ADDLITKMLASDESLLRYGGAFTIALAYAGTGNNSAVKRLLHVAVSDSNDD--VRRAAVIALGFVL 606 (963)
T ss_dssp GHHHHHHHHHCSCHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHCSCHH--HHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhccCCcHH--HHHHHHHHHHhhc
Confidence 3466778888888888888877665 3455566664433 34443333 6777888887754
No 51
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=35.75 E-value=49 Score=28.58 Aligned_cols=50 Identities=16% Similarity=0.143 Sum_probs=36.3
Q ss_pred CCChHHHHHHHHHHhcCCChh----HHHHHHHHhhcCCcchHHHHHHHHHHHhhhh
Q psy13489 109 ERDVTAQFDAIRALERFPTTT----TRLALTDTIESERAYVQVRCKAAQALTKVKE 160 (172)
Q Consensus 109 DrDVvAQ~EAI~aL~k~~s~~----~~~~L~r~L~d~~~FygVR~eAA~aLak~a~ 160 (172)
+++.+-+--|+++|++...+. ....+.++|.|.+. -||..|+.+..++-.
T Consensus 115 ~~N~~iR~lALRtL~~I~~~~m~~~l~~~lk~~L~d~~p--yVRk~A~l~~~kL~~ 168 (355)
T 3tjz_B 115 GKEDSYRGPAVRALCQITDSTMLQAIERYMKQAIVDKVP--SVSSSALVSSLHLLK 168 (355)
T ss_dssp SSCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHHHTCSSH--HHHHHHHHHHHHHTT
T ss_pred CCcHhHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCH--HHHHHHHHHHHHHhc
Confidence 467788888999999987754 45566666766543 489999988887543
No 52
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=34.16 E-value=18 Score=34.64 Aligned_cols=25 Identities=28% Similarity=0.323 Sum_probs=21.3
Q ss_pred HHHHhhhhHHHHHHHhhhchhhhhh
Q psy13489 7 DIMRKKAHLMIRMLEHRIGFELILQ 31 (172)
Q Consensus 7 ~~~~~k~hl~~r~~e~r~~~e~~lq 31 (172)
.+.-.||-.|+|||++.+|.|.|.+
T Consensus 408 ~i~Y~KGa~vL~mL~~~lG~e~F~~ 432 (909)
T 4fke_A 408 SISYSKGASVIRMLSNFLTEDLFKE 432 (909)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 3556799999999999999988754
No 53
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=33.90 E-value=66 Score=26.48 Aligned_cols=59 Identities=14% Similarity=0.089 Sum_probs=44.4
Q ss_pred HHHHHHhhCCChHHHHHHHHHHhcC--CCh---------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 101 QWQYQLRHERDVTAQFDAIRALERF--PTT---------TTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 101 Mw~~QLq~DrDVvAQ~EAI~aL~k~--~s~---------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
-....|+.+.+...+..|+.+|+.. +.+ .....|.+.|.+. =..||.+||.+|+.+...
T Consensus 128 ~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~--d~~v~~~A~~aLs~L~~~ 197 (296)
T 1xqr_A 128 KLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQ--VQKLKVKSAFLLQNLLVG 197 (296)
T ss_dssp HHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSS--CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCC--CHHHHHHHHHHHHHHHhC
Confidence 4567777777888899999998874 221 2466888888764 469999999999987643
No 54
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=33.89 E-value=39 Score=29.93 Aligned_cols=57 Identities=18% Similarity=0.131 Sum_probs=45.6
Q ss_pred HHHHhhCCChHHHHHHHHHHhcC----CCh----hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 103 QYQLRHERDVTAQFDAIRALERF----PTT----TTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 103 ~~QLq~DrDVvAQ~EAI~aL~k~----~s~----~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
.-++-.|++..-|..|+.+|.+. |.. .....|.+.|.|+ -.+||..|+.+|+.+...
T Consensus 126 l~~~L~d~~~~VRk~A~~al~~i~~~~p~~~~~~~~~~~l~~lL~d~--d~~V~~~A~~aL~~i~~~ 190 (591)
T 2vgl_B 126 LRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADS--NPMVVANAVAALSEISES 190 (591)
T ss_dssp HHHHSSCSCHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHTTSCS--CHHHHHHHHHHHHHHTTS
T ss_pred HHHHcCCCChHHHHHHHHHHHHHHhhChhhcccccHHHHHHHHhCCC--ChhHHHHHHHHHHHHHhh
Confidence 44666799999999999999875 321 2567888888765 479999999999998875
No 55
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=33.63 E-value=47 Score=30.10 Aligned_cols=54 Identities=13% Similarity=0.085 Sum_probs=41.2
Q ss_pred hCCChHHHHHHHHHHhcCCChhHHH----HHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 108 HERDVTAQFDAIRALERFPTTTTRL----ALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 108 ~DrDVvAQ~EAI~aL~k~~s~~~~~----~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
.|++..-+--|+++|+...++..+. .+.+++...+.-.-||..||.++.++..-
T Consensus 121 ~~~n~~ir~lALr~L~~i~~~e~~~~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~~ 178 (621)
T 2vgl_A 121 ASRNPTFMGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRT 178 (621)
T ss_dssp HSCCHHHHHHHHHHHHHHCCHHHHHHHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHh
Confidence 3688888999999999998876544 44555622335678999999999998763
No 56
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=32.46 E-value=87 Score=27.70 Aligned_cols=60 Identities=15% Similarity=0.032 Sum_probs=46.4
Q ss_pred HHHHHHHhhCCChHHHHHHHHHHhcCCCh----------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 100 YQWQYQLRHERDVTAQFDAIRALERFPTT----------TTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 100 ~Mw~~QLq~DrDVvAQ~EAI~aL~k~~s~----------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
...+..|..+.|...|..|+.+|...... .++..|.+.|.+. --.||..|+.+|++++..
T Consensus 59 ~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~--~~~v~~~A~~aL~nL~~~ 128 (644)
T 2z6h_A 59 SAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSP--VDSVLFYAITTLHNLLLH 128 (644)
T ss_dssp HHHHHHHHSCCCHHHHHHHHHHHHHHTTSHHHHHHHHTTTHHHHHHHHTTCS--SHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhcChhhHHHHHHcCCHHHHHHHHhCC--CHHHHHHHHHHHHHHHhC
Confidence 44567777767899999999998865321 3677888888765 478999999999998754
No 57
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=29.99 E-value=82 Score=26.18 Aligned_cols=62 Identities=18% Similarity=0.034 Sum_probs=45.7
Q ss_pred HHHHHHHhhCCChHHHHHHHHHHhcCCCh-----------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 100 YQWQYQLRHERDVTAQFDAIRALERFPTT-----------TTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 100 ~Mw~~QLq~DrDVvAQ~EAI~aL~k~~s~-----------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
-...-+|-++.|...+..|+.+|+..... .++..|.+.+.+...-..||..|+.+|+.++..
T Consensus 268 i~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~L~~ll~~~~~~~~v~~~a~~~L~nl~~~ 340 (529)
T 1jdh_A 268 LGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSR 340 (529)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCChHHHHHHHHccCCHHHHHHHHHHHHHHHHcC
Confidence 34445555788999999999999876442 256778888865433478999999999988653
No 58
>1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5
Probab=29.68 E-value=23 Score=28.85 Aligned_cols=45 Identities=24% Similarity=0.245 Sum_probs=34.3
Q ss_pred HHHHHhhCCChHHHHHHHHHHhcCCChhHHHHHHHHhhcCCcchHHHHHHHHHHH
Q psy13489 102 WQYQLRHERDVTAQFDAIRALERFPTTTTRLALTDTIESERAYVQVRCKAAQALT 156 (172)
Q Consensus 102 w~~QLq~DrDVvAQ~EAI~aL~k~~s~~~~~~L~r~L~d~~~FygVR~eAA~aLa 156 (172)
....|-.|+|-.-+..++++|. ...|.. |. +..|.||..|+.+|+
T Consensus 198 ~L~~Ll~D~d~~VR~~aa~~l~-------~~~L~~-L~--D~~~~VR~aa~~~L~ 242 (244)
T 1lrv_A 198 DLLELLHDPDWTVRLAAVEHAS-------LEALRE-LD--EPDPEVRLAIAGRLG 242 (244)
T ss_dssp GGGGGGGCSSHHHHHHHHHHSC-------HHHHHH-CC--CCCHHHHHHHHCCC-
T ss_pred HHHHHHcCCCHHHHHHHHHcCC-------HHHHHH-cc--CCCHHHHHHHHHHhC
Confidence 4666778999999999999975 244544 53 468999999998875
No 59
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=29.10 E-value=1.1e+02 Score=27.24 Aligned_cols=60 Identities=12% Similarity=-0.024 Sum_probs=45.3
Q ss_pred HHHHHHHhhCCChHHHHHHHHHHhcCCCh----hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 100 YQWQYQLRHERDVTAQFDAIRALERFPTT----TTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 100 ~Mw~~QLq~DrDVvAQ~EAI~aL~k~~s~----~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
.+-+-.+.+|+|..-+..|++.|.+..+. .++..|...+.+. -..+|.+++.++++++..
T Consensus 352 ~~~i~~~l~d~d~~Ir~~alelL~~l~~~~nv~~iv~eL~~~l~~~--d~e~r~~~v~~I~~la~k 415 (618)
T 1w63_A 352 RSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSC--EPEFKADCASGIFLAAEK 415 (618)
T ss_dssp HHHHHHGGGSSCHHHHHHHHHHHHHHCCSSSTHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHccCCChhHHHHHHHHHHHHcccccHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHH
Confidence 34555566889999999999998876553 3566677777664 367899999999999875
No 60
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=28.80 E-value=73 Score=29.47 Aligned_cols=55 Identities=13% Similarity=0.126 Sum_probs=42.3
Q ss_pred HhhCCChHHHHHHHHHHhcCCC-----------hhHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 106 LRHERDVTAQFDAIRALERFPT-----------TTTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 106 Lq~DrDVvAQ~EAI~aL~k~~s-----------~~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
|-.++|...|..|+.+|..... +.++..|.+.|.+. .-..+|..|+.+|.+++..
T Consensus 158 lL~~~d~~vr~~A~~~L~~L~~~~~~~~~i~~~~~~i~~Lv~~L~~~-~d~~vr~~Aa~aL~~Ls~~ 223 (780)
T 2z6g_A 158 LLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNT-NDVETARCTSGTLHNLSHH 223 (780)
T ss_dssp HHHCSCHHHHHHHHHHHHHHHTSHHHHHHHTTCHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHTS
T ss_pred HHCCCCHHHHHHHHHHHHHHhCCChhHHHHHhccChHHHHHHHHcCC-CCHHHHHHHHHHHHHHhCC
Confidence 3357899999999999887542 34677888888754 3678999999999997654
No 61
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=28.33 E-value=24 Score=34.30 Aligned_cols=25 Identities=20% Similarity=0.212 Sum_probs=21.3
Q ss_pred HHHHhhhhHHHHHHHhhhchhhhhh
Q psy13489 7 DIMRKKAHLMIRMLEHRIGFELILQ 31 (172)
Q Consensus 7 ~~~~~k~hl~~r~~e~r~~~e~~lq 31 (172)
.+.-.||-.|+|||++.+|.|.|.+
T Consensus 382 ~i~Y~KGa~vLrML~~~lGde~F~~ 406 (889)
T 3ebh_A 382 TTVYDKGSEVMRMYLTILGEEYYKK 406 (889)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHhCHHHHHH
Confidence 4566899999999999999988754
No 62
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=28.30 E-value=26 Score=31.89 Aligned_cols=21 Identities=19% Similarity=0.195 Sum_probs=17.3
Q ss_pred HHHhhhhHHHHHHHhhhchhh
Q psy13489 8 IMRKKAHLMIRMLEHRIGFEL 28 (172)
Q Consensus 8 ~~~~k~hl~~r~~e~r~~~e~ 28 (172)
+.=.||-+|+||||+.+|.+-
T Consensus 379 i~Y~KGa~vL~mL~~~lG~~~ 399 (608)
T 3u9w_A 379 VPYEKGFALLFYLEQLLGGPE 399 (608)
T ss_dssp HHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHhHHHHHHHHHHHHhCCHH
Confidence 345799999999999999543
No 63
>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1
Probab=27.53 E-value=41 Score=32.77 Aligned_cols=49 Identities=14% Similarity=0.133 Sum_probs=41.0
Q ss_pred ChHHHHHHHHHHhcCCCh---hHHHHHHHHhhcCCcchHHHHHHHHHHHhhh
Q psy13489 111 DVTAQFDAIRALERFPTT---TTRLALTDTIESERAYVQVRCKAAQALTKVK 159 (172)
Q Consensus 111 DVvAQ~EAI~aL~k~~s~---~~~~~L~r~L~d~~~FygVR~eAA~aLak~a 159 (172)
..--|..||.||.+.+.. .+..+|-.+..|...-.-||+.|...|-++.
T Consensus 491 ~~rvr~aAi~ALr~~~~~~p~~v~~il~~i~~n~~e~~EvRiaA~~~Lm~t~ 542 (1056)
T 1lsh_A 491 STRVQAEAIMALRNIAKRDPRKVQEIVLPIFLNVAIKSELRIRSCIVFFESK 542 (1056)
T ss_dssp CHHHHHHHHHTTTTGGGTCHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTC
T ss_pred chHHHHHHHHHHHHhhhhchHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHC
Confidence 345678899999988653 4888999999999999999999999998754
No 64
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=26.34 E-value=74 Score=25.68 Aligned_cols=56 Identities=16% Similarity=0.052 Sum_probs=43.6
Q ss_pred HHHHhhCCChHHHHHHHHHHhcCCC---hhHHHHHHHHhhcCCcchHHHHHHHHHHHhhh
Q psy13489 103 QYQLRHERDVTAQFDAIRALERFPT---TTTRLALTDTIESERAYVQVRCKAAQALTKVK 159 (172)
Q Consensus 103 ~~QLq~DrDVvAQ~EAI~aL~k~~s---~~~~~~L~r~L~d~~~FygVR~eAA~aLak~a 159 (172)
..++ .++|-..|.+|-+.|.+... +.....|...+.+...-..||..||..|.+.-
T Consensus 7 L~~~-~s~d~~~r~~Ae~~L~~~~~~~~~~~~~~L~~il~~~~~~~~vR~~a~~~Lk~~i 65 (462)
T 1ibr_B 7 LEKT-VSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQIKNSL 65 (462)
T ss_dssp HHHT-TCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHH
T ss_pred HHHh-cCCCHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHcCCCChHHHHHHHHHHHHhc
Confidence 3444 35777888888888888654 56778888888886667899999999998875
No 65
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=24.30 E-value=1.2e+02 Score=23.89 Aligned_cols=57 Identities=5% Similarity=0.121 Sum_probs=43.4
Q ss_pred HHHHHhhCCChHHHHHHHHHHhcC----C----------ChhHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 102 WQYQLRHERDVTAQFDAIRALERF----P----------TTTTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 102 w~~QLq~DrDVvAQ~EAI~aL~k~----~----------s~~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
....|++ ++.-.+.+|+.+|+.. + ++..+..|.+++.|+ .-.||..|..+|+.+..-
T Consensus 151 l~~~l~~-k~~~vk~~al~~l~~~~~~~~~~~~~l~~~l~~~iip~l~~~l~D~--~~~VR~aA~~~l~~i~~~ 221 (249)
T 2qk1_A 151 ILEHMKH-KTPQIRMECTQLFNASMKEEKDGYSTLQRYLKDEVVPIVIQIVNDT--QPAIRTIGFESFAILIKI 221 (249)
T ss_dssp HHHHTTC-SSHHHHHHHHHHHHHHHHHCCSCSHHHHHHHTTTHHHHHHHHHTCS--SHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcC-CChHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHH
Confidence 4455655 5888999999888664 3 245677888899664 889999999999997654
No 66
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=23.89 E-value=35 Score=33.19 Aligned_cols=24 Identities=21% Similarity=0.311 Sum_probs=20.3
Q ss_pred HHHhhhhHHHHHHHhhhchhhhhh
Q psy13489 8 IMRKKAHLMIRMLEHRIGFELILQ 31 (172)
Q Consensus 8 ~~~~k~hl~~r~~e~r~~~e~~lq 31 (172)
+.-.||-+|+|||++.+|.|.|.+
T Consensus 453 i~Y~KGa~vL~mL~~~lG~e~F~~ 476 (967)
T 3se6_A 453 VSYNKGACILNMLKDFLGEEKFQK 476 (967)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred hhhhHHHHHHHHHHHHhHHHHHHH
Confidence 445799999999999999887754
No 67
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=23.73 E-value=1.2e+02 Score=29.02 Aligned_cols=57 Identities=19% Similarity=0.133 Sum_probs=42.1
Q ss_pred HHHHHhhCCChHHHHHHHHHHhcCCC---h----hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 102 WQYQLRHERDVTAQFDAIRALERFPT---T----TTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 102 w~~QLq~DrDVvAQ~EAI~aL~k~~s---~----~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
....| .|++..-|..|+.+|+.... . .....|.+.+.++. -.||..|+.+|+.++..
T Consensus 53 Ll~~L-~d~~~~vR~~A~~~L~~l~~~~~~~~~~~i~~~Ll~~l~d~~--~~vR~~a~~~L~~i~~~ 116 (1230)
T 1u6g_C 53 ILKLL-EDKNGEVQNLAVKCLGPLVSKVKEYQVETIVDTLCTNMLSDK--EQLRDISSIGLKTVIGE 116 (1230)
T ss_dssp HHHHT-TCSSHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTCSS--SHHHHHHHHHHHHHHHH
T ss_pred HHHHh-cCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHh
Confidence 44455 48999999999999876532 1 35666777776654 47899999999998865
No 68
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=21.42 E-value=1.2e+02 Score=29.12 Aligned_cols=59 Identities=14% Similarity=0.141 Sum_probs=43.6
Q ss_pred HHHHHHhhCCChHHHHHHHHHHhcCCCh-----------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 101 QWQYQLRHERDVTAQFDAIRALERFPTT-----------TTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 101 Mw~~QLq~DrDVvAQ~EAI~aL~k~~s~-----------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
-....|.+|.++..+.+|+.+|....+. .++..|.+.+.+. --.||..|+.+|+.++..
T Consensus 584 pLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~--~~~Vq~~A~~~L~NLa~~ 653 (810)
T 3now_A 584 PLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMED--HLYLTRAAAQCLCNLVMS 653 (810)
T ss_dssp HHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSC--CTTHHHHHHHHHHHHTTS
T ss_pred HHHHHhCCCCcHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHHHhCC
Confidence 3456677777888888999988876442 1456677777664 367999999999998754
No 69
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=20.19 E-value=1.1e+02 Score=25.11 Aligned_cols=58 Identities=9% Similarity=-0.014 Sum_probs=43.8
Q ss_pred HHHHHhhCCChHHHHHHHHHHhcCC--Ch---------hHHHHHHHHhhcCCcchHHHHHHHHHHHhhhhh
Q psy13489 102 WQYQLRHERDVTAQFDAIRALERFP--TT---------TTRLALTDTIESERAYVQVRCKAAQALTKVKEI 161 (172)
Q Consensus 102 w~~QLq~DrDVvAQ~EAI~aL~k~~--s~---------~~~~~L~r~L~d~~~FygVR~eAA~aLak~a~~ 161 (172)
..-+|-++.|...|.+|+.+|+... ++ .++..|.+.|.+. -..||..|+.+|+.+...
T Consensus 171 ~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~Lv~LL~~~--d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 171 VLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTE--HSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp HHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHTSC--CSTHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHHHHHHHcCC--ChhHHHHHHHHHHHHHhC
Confidence 3344446789999999999987742 11 2577888888764 568999999999998865
Done!