Your job contains 1 sequence.
>psy13489
MSPQYLDIMRKKAHLMIRMLEHRIGFELILQLRLPRPVDSVGSGDDYYSSDSPVLWIRLD
PEMTIIRSVVIEASDSPVLWIRLDPEMTIIRSVVIEQPDYQWQYQLRHERDVTAQFDAIR
ALERFPTTTTRLALTDTIESERAYVQVRCKAAQALTKVKEILVFAVALRSAK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13489
(172 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0011836 - symbol:Taf2 "TBP-associated factor 2" sp... 308 2.2e-34 2
UNIPROTKB|F1NKW6 - symbol:F1NKW6 "Uncharacterized protein... 228 9.9e-23 2
UNIPROTKB|F1MME0 - symbol:TAF2 "Uncharacterized protein" ... 229 2.9e-22 2
UNIPROTKB|Q5ZIT8 - symbol:TAF2 "Transcription initiation ... 228 3.4e-22 2
UNIPROTKB|Q6P1X5 - symbol:TAF2 "Transcription initiation ... 227 3.7e-22 2
UNIPROTKB|K7GP24 - symbol:TAF2 "Uncharacterized protein" ... 227 3.7e-22 2
UNIPROTKB|F1S282 - symbol:TAF2 "Uncharacterized protein" ... 227 3.7e-22 2
UNIPROTKB|E2QT19 - symbol:TAF2 "Uncharacterized protein" ... 227 4.7e-22 2
UNIPROTKB|F6UTN8 - symbol:TAF2 "Uncharacterized protein" ... 227 4.7e-22 2
ZFIN|ZDB-GENE-030131-3207 - symbol:taf2 "TAF2 RNA polymer... 225 7.4e-22 2
MGI|MGI:2443028 - symbol:Taf2 "TAF2 RNA polymerase II, TA... 224 7.7e-22 2
UNIPROTKB|F1LNY6 - symbol:Taf2 "Protein Taf2" species:101... 224 9.7e-22 2
WB|WBGene00006383 - symbol:taf-2 species:6239 "Caenorhabd... 189 3.7e-18 2
DICTYBASE|DDB_G0292724 - symbol:taf2 "TFIID subunit" spec... 172 6.4e-13 2
TAIR|locus:2031571 - symbol:TAF2 "TBP-associated factor 2... 118 8.5e-06 1
>FB|FBgn0011836 [details] [associations]
symbol:Taf2 "TBP-associated factor 2" species:7227
"Drosophila melanogaster" [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0001129 "TBP-class protein binding RNA
polymerase II transcription factor activity involved in
preinitiation complex assembly" evidence=IPI] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISS;IPI] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0001075 "RNA polymerase
II core promoter sequence-specific DNA binding transcription factor
activity involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046427 "positive regulation of JAK-STAT cascade"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR014782 Pfam:PF01433 EMBL:AE014296 GO:GO:0022008
GO:GO:0043565 GO:GO:0008270 eggNOG:COG0308 GO:GO:0004222
GO:GO:0046427 GO:GO:0005669 GO:GO:0060261 GO:GO:0001129 CTD:6873
GeneTree:ENSGT00390000000420 KO:K03128 OMA:PCVDSFA EMBL:X79243
EMBL:AY070564 PIR:A54063 RefSeq:NP_729571.1 UniGene:Dm.6380
ProteinModelPortal:Q24325 DIP:DIP-255N IntAct:Q24325 STRING:Q24325
PaxDb:Q24325 EnsemblMetazoa:FBtr0076361 EnsemblMetazoa:FBtr0332688
GeneID:39164 KEGG:dme:Dmel_CG6711 FlyBase:FBgn0011836
InParanoid:Q24325 OrthoDB:EOG4PC86W PhylomeDB:Q24325
GenomeRNAi:39164 NextBio:812285 Bgee:Q24325 GermOnline:CG6711
Uniprot:Q24325
Length = 1221
Score = 308 (113.5 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 56/89 (62%), Positives = 69/89 (77%)
Query: 75 DSPVLWIRLDPEMTIIRSVVIEQPDYQWQYQLRHERDVTAQFDAIRALERFPXXXXXXXX 134
DSPVLWIRLDPEM ++R ++IEQPD+QWQYQLRHERDVTAQF AI+AL+++P
Sbjct: 625 DSPVLWIRLDPEMILLRDLIIEQPDFQWQYQLRHERDVTAQFQAIQALQKYPTNATRLAL 684
Query: 135 XXXIESERAYVQVRCKAAQALTKVKEILV 163
IESER + QVRC+AA +LTKV +V
Sbjct: 685 TDTIESERCFYQVRCEAAHSLTKVANQMV 713
Score = 107 (42.7 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 19/32 (59%), Positives = 29/32 (90%)
Query: 1 MSPQYLDIMRKKAHLMIRMLEHRIGFELILQL 32
+SP+Y++ MR+KAH +IRMLE+RIG EL++Q+
Sbjct: 444 VSPKYVEAMRRKAHFVIRMLENRIGQELLIQV 475
Score = 87 (35.7 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 15/23 (65%), Positives = 19/23 (82%)
Query: 53 PVLWIRLDPEMTIIRSVVIEASD 75
PVLWIRLDPEM ++R ++IE D
Sbjct: 627 PVLWIRLDPEMILLRDLIIEQPD 649
>UNIPROTKB|F1NKW6 [details] [associations]
symbol:F1NKW6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0033276 "transcription
factor TFTC complex" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR016024 GO:GO:0000086 SUPFAM:SSF48371
GO:GO:0045944 GO:GO:0044212 GO:GO:0006367 GO:GO:0005669
GO:GO:0033276 GeneTree:ENSGT00390000000420 EMBL:AADN02022570
EMBL:AADN02022571 EMBL:AADN02022572 EMBL:AADN02022573
EMBL:AADN02022574 EMBL:AADN02022575 EMBL:AADN02022576
EMBL:AADN02022577 EMBL:AADN02022578 EMBL:AADN02022579
EMBL:AADN02022580 IPI:IPI01017150 Ensembl:ENSGALT00000026491
OMA:ADFIANS ArrayExpress:F1NKW6 Uniprot:F1NKW6
Length = 770
Score = 228 (85.3 bits), Expect = 9.9e-23, Sum P(2) = 9.9e-23
Identities = 42/90 (46%), Positives = 59/90 (65%)
Query: 74 SDSPVLWIRLDPEMTIIRSVVIEQPDYQWQYQLRHERDVTAQFDAIRALERFPXXXXXXX 133
+DSP+LWIR+DP+M+++R V EQ D+ WQYQLR+ERDV AQ +AI ALE+FP
Sbjct: 196 ADSPLLWIRIDPDMSVLRKVEFEQSDFMWQYQLRYERDVVAQEEAILALEKFPTPASRLA 255
Query: 134 XXXXIESERAYVQVRCKAAQALTKVKEILV 163
+E E+ + +VR A L K+ +V
Sbjct: 256 LTDILEQEQCFYRVRMLACFCLAKIANSMV 285
Score = 82 (33.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 53 PVLWIRLDPEMTIIRSVVIEASDSPVLW 80
P+LWIR+DP+M+++R V E SD +W
Sbjct: 199 PLLWIRIDPDMSVLRKVEFEQSD--FMW 224
Score = 71 (30.1 bits), Expect = 9.9e-23, Sum P(2) = 9.9e-23
Identities = 13/32 (40%), Positives = 24/32 (75%)
Query: 1 MSPQYLDIMRKKAHLMIRMLEHRIGFELILQL 32
+S +Y + + KAHL++R++E+RI E +LQ+
Sbjct: 16 LSWEYYTMFQCKAHLVMRLIENRISMEFMLQV 47
>UNIPROTKB|F1MME0 [details] [associations]
symbol:TAF2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA]
InterPro:IPR014782 InterPro:IPR016024 Pfam:PF01433 GO:GO:0000086
SUPFAM:SSF48371 GO:GO:0008270 GO:GO:0045944 GO:GO:0008237
GO:GO:0044212 GO:GO:0006367 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00390000000420 OMA:PCVDSFA EMBL:DAAA02039690
EMBL:DAAA02039691 IPI:IPI00923924 Ensembl:ENSBTAT00000061330
Uniprot:F1MME0
Length = 1202
Score = 229 (85.7 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 43/90 (47%), Positives = 58/90 (64%)
Query: 74 SDSPVLWIRLDPEMTIIRSVVIEQPDYQWQYQLRHERDVTAQFDAIRALERFPXXXXXXX 133
+DSP+LWIR+DP+M ++R V EQ D+ WQYQLR+ERDV AQ +AI ALERFP
Sbjct: 623 ADSPLLWIRIDPDMAVLRKVDSEQADFMWQYQLRYERDVVAQQEAISALERFPTPASRLA 682
Query: 134 XXXXIESERAYVQVRCKAAQALTKVKEILV 163
+E E+ + +VR A L K+ +V
Sbjct: 683 LTDVLEQEQCFYRVRMAACFCLAKIANSMV 712
Score = 71 (30.1 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 13/32 (40%), Positives = 24/32 (75%)
Query: 1 MSPQYLDIMRKKAHLMIRMLEHRIGFELILQL 32
+S +Y + + KAHL++R++E+RI E +LQ+
Sbjct: 441 LSWEYYTMFQCKAHLVMRLIENRISMEFMLQV 472
>UNIPROTKB|Q5ZIT8 [details] [associations]
symbol:TAF2 "Transcription initiation factor TFIID subunit
2" species:9031 "Gallus gallus" [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR014782 InterPro:IPR016024 Pfam:PF01433 GO:GO:0005634
SUPFAM:SSF48371 GO:GO:0006355 GO:GO:0008270 GO:GO:0008237
GO:GO:0006351 EMBL:AJ720696 IPI:IPI00583186 UniGene:Gga.21373
ProteinModelPortal:Q5ZIT8 MEROPS:M01.972 PRIDE:Q5ZIT8
HOVERGEN:HBG094022 Uniprot:Q5ZIT8
Length = 1168
Score = 228 (85.3 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 42/90 (46%), Positives = 59/90 (65%)
Query: 74 SDSPVLWIRLDPEMTIIRSVVIEQPDYQWQYQLRHERDVTAQFDAIRALERFPXXXXXXX 133
+DSP+LWIR+DP+M+++R V EQ D+ WQYQLR+ERDV AQ +AI ALE+FP
Sbjct: 611 ADSPLLWIRIDPDMSVLRKVEFEQSDFMWQYQLRYERDVVAQEEAILALEKFPTPASRLA 670
Query: 134 XXXXIESERAYVQVRCKAAQALTKVKEILV 163
+E E+ + +VR A L K+ +V
Sbjct: 671 LTDILEQEQCFYRVRMLACFCLAKIANSMV 700
Score = 82 (33.9 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 53 PVLWIRLDPEMTIIRSVVIEASDSPVLW 80
P+LWIR+DP+M+++R V E SD +W
Sbjct: 614 PLLWIRIDPDMSVLRKVEFEQSD--FMW 639
Score = 71 (30.1 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 13/32 (40%), Positives = 24/32 (75%)
Query: 1 MSPQYLDIMRKKAHLMIRMLEHRIGFELILQL 32
+S +Y + + KAHL++R++E+RI E +LQ+
Sbjct: 431 LSWEYYTMFQCKAHLVMRLIENRISMEFMLQV 462
>UNIPROTKB|Q6P1X5 [details] [associations]
symbol:TAF2 "Transcription initiation factor TFIID subunit
2" species:9606 "Homo sapiens" [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IMP] [GO:0005669 "transcription factor TFIID
complex" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=IMP] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] InterPro:IPR014782
InterPro:IPR016024 Pfam:PF01433 GO:GO:0000086 SUPFAM:SSF48371
GO:GO:0008270 GO:GO:0045944 GO:GO:0008237 eggNOG:COG0308
GO:GO:0044212 GO:GO:0014070 GO:GO:0006367 GO:GO:0005669
EMBL:AC107960 GO:GO:0033276 MEROPS:M01.972 HOVERGEN:HBG094022
CTD:6873 KO:K03128 OMA:PCVDSFA OrthoDB:EOG46HG8V EMBL:AF026445
EMBL:AF040701 EMBL:AF057694 EMBL:AK316592 EMBL:AC021945
EMBL:BC035673 EMBL:BC047732 EMBL:BC064830 IPI:IPI00328144
RefSeq:NP_003175.1 UniGene:Hs.122752 ProteinModelPortal:Q6P1X5
IntAct:Q6P1X5 STRING:Q6P1X5 PhosphoSite:Q6P1X5 DMDM:145559533
PaxDb:Q6P1X5 PRIDE:Q6P1X5 DNASU:6873 Ensembl:ENST00000378164
GeneID:6873 KEGG:hsa:6873 UCSC:uc003you.3 GeneCards:GC08M120812
HGNC:HGNC:11536 MIM:604912 neXtProt:NX_Q6P1X5 PharmGKB:PA36311
InParanoid:Q6P1X5 ChiTaRS:TAF2 GenomeRNAi:6873 NextBio:26833
ArrayExpress:Q6P1X5 Bgee:Q6P1X5 CleanEx:HS_TAF2
Genevestigator:Q6P1X5 GermOnline:ENSG00000064313 Uniprot:Q6P1X5
Length = 1199
Score = 227 (85.0 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 41/90 (45%), Positives = 59/90 (65%)
Query: 74 SDSPVLWIRLDPEMTIIRSVVIEQPDYQWQYQLRHERDVTAQFDAIRALERFPXXXXXXX 133
+DSP+LWIR+DP+M+++R V EQ D+ WQYQLR+ERDV AQ ++I ALE+FP
Sbjct: 621 ADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVVAQQESILALEKFPTPASRLA 680
Query: 134 XXXXIESERAYVQVRCKAAQALTKVKEILV 163
+E E+ + +VR A L K+ +V
Sbjct: 681 LTDILEQEQCFYRVRMSACFCLAKIANSMV 710
Score = 81 (33.6 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 53 PVLWIRLDPEMTIIRSVVIEASDSPVLWIRLDPEMTIIRSVVIEQ 97
P+LWIR+DP+M+++R V E +D +W ++ R VV +Q
Sbjct: 624 PLLWIRIDPDMSVLRKVEFEQAD--FMW---QYQLRYERDVVAQQ 663
Score = 72 (30.4 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 13/32 (40%), Positives = 24/32 (75%)
Query: 1 MSPQYLDIMRKKAHLMIRMLEHRIGFELILQL 32
+S +Y + + KAHL++R++E+RI E +LQ+
Sbjct: 441 LSWEYYSMFQCKAHLVMRLIENRISMEFMLQV 472
>UNIPROTKB|K7GP24 [details] [associations]
symbol:TAF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] InterPro:IPR014782
InterPro:IPR016024 Pfam:PF01433 SUPFAM:SSF48371
GeneTree:ENSGT00390000000420 EMBL:CU467749 EMBL:CU326377
Ensembl:ENSSSCT00000033583 Uniprot:K7GP24
Length = 1100
Score = 227 (85.0 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 41/90 (45%), Positives = 59/90 (65%)
Query: 74 SDSPVLWIRLDPEMTIIRSVVIEQPDYQWQYQLRHERDVTAQFDAIRALERFPXXXXXXX 133
+DSP+LWIR+DP+M+++R V EQ D+ WQYQLR+ERDV AQ ++I ALE+FP
Sbjct: 522 ADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVVAQQESILALEKFPTPASRLA 581
Query: 134 XXXXIESERAYVQVRCKAAQALTKVKEILV 163
+E E+ + +VR A L K+ +V
Sbjct: 582 LTDILEQEQCFYRVRMSACFCLAKIANSMV 611
Score = 81 (33.6 bits), Expect = 0.00079, Sum P(2) = 0.00078
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 53 PVLWIRLDPEMTIIRSVVIEASDSPVLWIRLDPEMTIIRSVVIEQ 97
P+LWIR+DP+M+++R V E +D +W ++ R VV +Q
Sbjct: 525 PLLWIRIDPDMSVLRKVEFEQAD--FMW---QYQLRYERDVVAQQ 564
Score = 71 (30.1 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 13/32 (40%), Positives = 24/32 (75%)
Query: 1 MSPQYLDIMRKKAHLMIRMLEHRIGFELILQL 32
+S +Y + + KAHL++R++E+RI E +LQ+
Sbjct: 342 LSWEYYTMFQCKAHLVMRLIENRISMEFMLQV 373
>UNIPROTKB|F1S282 [details] [associations]
symbol:TAF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA]
InterPro:IPR014782 InterPro:IPR016024 Pfam:PF01433 GO:GO:0000086
SUPFAM:SSF48371 GO:GO:0008270 GO:GO:0045944 GO:GO:0008237
GO:GO:0044212 GO:GO:0006367 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00390000000420 OMA:PCVDSFA EMBL:CU467749
EMBL:CU326377 Ensembl:ENSSSCT00000006583 ArrayExpress:F1S282
Uniprot:F1S282
Length = 1101
Score = 227 (85.0 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 41/90 (45%), Positives = 59/90 (65%)
Query: 74 SDSPVLWIRLDPEMTIIRSVVIEQPDYQWQYQLRHERDVTAQFDAIRALERFPXXXXXXX 133
+DSP+LWIR+DP+M+++R V EQ D+ WQYQLR+ERDV AQ ++I ALE+FP
Sbjct: 523 ADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVVAQQESILALEKFPTPASRLA 582
Query: 134 XXXXIESERAYVQVRCKAAQALTKVKEILV 163
+E E+ + +VR A L K+ +V
Sbjct: 583 LTDILEQEQCFYRVRMSACFCLAKIANSMV 612
Score = 81 (33.6 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 53 PVLWIRLDPEMTIIRSVVIEASDSPVLWIRLDPEMTIIRSVVIEQ 97
P+LWIR+DP+M+++R V E +D +W ++ R VV +Q
Sbjct: 526 PLLWIRIDPDMSVLRKVEFEQAD--FMW---QYQLRYERDVVAQQ 565
Score = 71 (30.1 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 13/32 (40%), Positives = 24/32 (75%)
Query: 1 MSPQYLDIMRKKAHLMIRMLEHRIGFELILQL 32
+S +Y + + KAHL++R++E+RI E +LQ+
Sbjct: 342 LSWEYYTMFQCKAHLVMRLIENRISMEFMLQV 373
>UNIPROTKB|E2QT19 [details] [associations]
symbol:TAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA]
Ensembl:ENSCAFT00000001363 GO:GO:0008237 GO:GO:0008270
InterPro:IPR016024 InterPro:IPR014782 Pfam:PF01433 SUPFAM:SSF48371
Uniprot:E2QT19
Length = 1202
Score = 227 (85.0 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 41/90 (45%), Positives = 59/90 (65%)
Query: 74 SDSPVLWIRLDPEMTIIRSVVIEQPDYQWQYQLRHERDVTAQFDAIRALERFPXXXXXXX 133
+DSP+LWIR+DP+M+++R V EQ D+ WQYQLR+ERDV AQ ++I ALE+FP
Sbjct: 622 ADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVVAQQESILALEKFPTPASRLA 681
Query: 134 XXXXIESERAYVQVRCKAAQALTKVKEILV 163
+E E+ + +VR A L K+ +V
Sbjct: 682 LTDILEQEQCFYRVRMSACFCLAKIANSMV 711
Score = 81 (33.6 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 53 PVLWIRLDPEMTIIRSVVIEASDSPVLWIRLDPEMTIIRSVVIEQ 97
P+LWIR+DP+M+++R V E +D +W ++ R VV +Q
Sbjct: 625 PLLWIRIDPDMSVLRKVEFEQAD--FMW---QYQLRYERDVVAQQ 664
Score = 71 (30.1 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 13/32 (40%), Positives = 24/32 (75%)
Query: 1 MSPQYLDIMRKKAHLMIRMLEHRIGFELILQL 32
+S +Y + + KAHL++R++E+RI E +LQ+
Sbjct: 442 LSWEYYTMFQCKAHLVMRLIENRISMEFMLQV 473
Score = 35 (17.4 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 55 LWIRLDPEMTIIRSVVIEASDSP 77
LW +D E+ +++ + + D P
Sbjct: 134 LWKHVDAELKVLKIHINFSLDQP 156
>UNIPROTKB|F6UTN8 [details] [associations]
symbol:TAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA]
InterPro:IPR014782 InterPro:IPR016024 Pfam:PF01433 SUPFAM:SSF48371
GO:GO:0008270 GO:GO:0008237 GeneTree:ENSGT00390000000420
Ensembl:ENSCAFT00000001363 EMBL:AAEX03008768 OMA:CFCLAKX
Uniprot:F6UTN8
Length = 1206
Score = 227 (85.0 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 41/90 (45%), Positives = 59/90 (65%)
Query: 74 SDSPVLWIRLDPEMTIIRSVVIEQPDYQWQYQLRHERDVTAQFDAIRALERFPXXXXXXX 133
+DSP+LWIR+DP+M+++R V EQ D+ WQYQLR+ERDV AQ ++I ALE+FP
Sbjct: 621 ADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVVAQQESILALEKFPTPASRLA 680
Query: 134 XXXXIESERAYVQVRCKAAQALTKVKEILV 163
+E E+ + +VR A L K+ +V
Sbjct: 681 LTDILEQEQCFYRVRMSACFCLAKIANSMV 710
Score = 81 (33.6 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 53 PVLWIRLDPEMTIIRSVVIEASDSPVLWIRLDPEMTIIRSVVIEQ 97
P+LWIR+DP+M+++R V E +D +W ++ R VV +Q
Sbjct: 624 PLLWIRIDPDMSVLRKVEFEQAD--FMW---QYQLRYERDVVAQQ 663
Score = 71 (30.1 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 13/32 (40%), Positives = 24/32 (75%)
Query: 1 MSPQYLDIMRKKAHLMIRMLEHRIGFELILQL 32
+S +Y + + KAHL++R++E+RI E +LQ+
Sbjct: 441 LSWEYYTMFQCKAHLVMRLIENRISMEFMLQV 472
>ZFIN|ZDB-GENE-030131-3207 [details] [associations]
symbol:taf2 "TAF2 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR014782 Pfam:PF01433
ZFIN:ZDB-GENE-030131-3207 GO:GO:0005634 GO:GO:0006355 GO:GO:0008270
GO:GO:0008237 GO:GO:0006351 eggNOG:COG0308 HOVERGEN:HBG094022
EMBL:AY648781 EMBL:BC076415 EMBL:BC091664 EMBL:BC107957
IPI:IPI00508952 RefSeq:NP_001003835.1 UniGene:Dr.20641
ProteinModelPortal:Q32PW3 STRING:Q32PW3 Ensembl:ENSDART00000056072
GeneID:324486 KEGG:dre:324486 CTD:6873 GeneTree:ENSGT00390000000420
HOGENOM:HOG000046103 InParanoid:Q32PW3 KO:K03128 OMA:PCVDSFA
OrthoDB:EOG46HG8V NextBio:20808797 Uniprot:Q32PW3
Length = 1191
Score = 225 (84.3 bits), Expect = 7.4e-22, Sum P(2) = 7.4e-22
Identities = 42/90 (46%), Positives = 59/90 (65%)
Query: 74 SDSPVLWIRLDPEMTIIRSVVIEQPDYQWQYQLRHERDVTAQFDAIRALERFPXXXXXXX 133
+DSP+LWIR+DP+M+I+R V EQ D+ WQYQLR+ERDV AQ +AI ALE+FP
Sbjct: 610 ADSPLLWIRIDPDMSILRKVEFEQADFMWQYQLRYERDVVAQEEAILALEKFPTPPSRRA 669
Query: 134 XXXXIESERAYVQVRCKAAQALTKVKEILV 163
+E ++ + +VR A L K+ +V
Sbjct: 670 LTDILEQDQCFYKVRMHACFCLAKIANSMV 699
Score = 71 (30.1 bits), Expect = 7.4e-22, Sum P(2) = 7.4e-22
Identities = 13/32 (40%), Positives = 24/32 (75%)
Query: 1 MSPQYLDIMRKKAHLMIRMLEHRIGFELILQL 32
+S +Y + + KAHL++R++E+RI E +LQ+
Sbjct: 430 LSWEYYKMFQCKAHLVMRLIENRISMEFMLQV 461
>MGI|MGI:2443028 [details] [associations]
symbol:Taf2 "TAF2 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=ISO;ISA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] InterPro:IPR014782
InterPro:IPR016024 Pfam:PF01433 MGI:MGI:2443028 SUPFAM:SSF48371
GO:GO:0006355 GO:GO:0008270 GO:GO:0008237 GO:GO:0006351
eggNOG:COG0308 GO:GO:0005669 MEROPS:M01.972 HOVERGEN:HBG094022
OrthoDB:EOG46HG8V ChiTaRS:TAF2 EMBL:AC137950 EMBL:AK028828
EMBL:AK051126 IPI:IPI00658461 UniGene:Mm.380957
ProteinModelPortal:Q8C176 STRING:Q8C176 PhosphoSite:Q8C176
PRIDE:Q8C176 InParanoid:Q8C176 Genevestigator:Q8C176
GermOnline:ENSMUSG00000037343 Uniprot:Q8C176
Length = 1104
Score = 224 (83.9 bits), Expect = 7.7e-22, Sum P(2) = 7.7e-22
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 74 SDSPVLWIRLDPEMTIIRSVVIEQPDYQWQYQLRHERDVTAQFDAIRALERFPXXXXXXX 133
+DSP+LWIR+DP+M+++R V EQ D+ WQY+LR+ERDV AQ ++I ALE+FP
Sbjct: 611 ADSPLLWIRIDPDMSVLRKVEFEQADFMWQYELRYERDVVAQQESILALEKFPTPASRLA 670
Query: 134 XXXXIESERAYVQVRCKAAQALTKVKEILV 163
+E E+ + +VR A L K+ +V
Sbjct: 671 LTDILEQEQCFYRVRMSACFCLAKIANSMV 700
Score = 84 (34.6 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 53 PVLWIRLDPEMTIIRSVVIEASDSPVLWIRLDPEMTIIRSVVIEQ 97
P+LWIR+DP+M+++R V E +D +W E+ R VV +Q
Sbjct: 614 PLLWIRIDPDMSVLRKVEFEQAD--FMW---QYELRYERDVVAQQ 653
Score = 71 (30.1 bits), Expect = 7.7e-22, Sum P(2) = 7.7e-22
Identities = 13/32 (40%), Positives = 24/32 (75%)
Query: 1 MSPQYLDIMRKKAHLMIRMLEHRIGFELILQL 32
+S +Y + + KAHL++R++E+RI E +LQ+
Sbjct: 431 LSWEYYTMFQCKAHLVMRLIENRISMEFMLQV 462
>UNIPROTKB|F1LNY6 [details] [associations]
symbol:Taf2 "Protein Taf2" species:10116 "Rattus
norvegicus" [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR014782 InterPro:IPR016024 Pfam:PF01433 RGD:621487
GO:GO:0000086 SUPFAM:SSF48371 GO:GO:0008270 GO:GO:0045944
GO:GO:0008237 GO:GO:0044212 GO:GO:0006367 GO:GO:0005669
GO:GO:0033276 CTD:6873 GeneTree:ENSGT00390000000420 KO:K03128
IPI:IPI00366255 RefSeq:NP_579853.1 UniGene:Rn.33143
Ensembl:ENSRNOT00000040836 GeneID:170844 KEGG:rno:170844
NextBio:621269 ArrayExpress:F1LNY6 Uniprot:F1LNY6
Length = 1200
Score = 224 (83.9 bits), Expect = 9.7e-22, Sum P(2) = 9.7e-22
Identities = 40/90 (44%), Positives = 59/90 (65%)
Query: 74 SDSPVLWIRLDPEMTIIRSVVIEQPDYQWQYQLRHERDVTAQFDAIRALERFPXXXXXXX 133
+DSP+LWIR+DP+M+++R V EQ D+ WQY+LR+ERDV AQ ++I ALE+FP
Sbjct: 621 ADSPLLWIRIDPDMSVLRKVEFEQADFMWQYELRYERDVVAQQESILALEKFPTPASRLA 680
Query: 134 XXXXIESERAYVQVRCKAAQALTKVKEILV 163
+E E+ + +VR A L K+ +V
Sbjct: 681 LTDILEQEQCFYRVRMSACFCLAKIANSMV 710
Score = 84 (34.6 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 53 PVLWIRLDPEMTIIRSVVIEASDSPVLWIRLDPEMTIIRSVVIEQ 97
P+LWIR+DP+M+++R V E +D +W E+ R VV +Q
Sbjct: 624 PLLWIRIDPDMSVLRKVEFEQAD--FMW---QYELRYERDVVAQQ 663
Score = 71 (30.1 bits), Expect = 9.7e-22, Sum P(2) = 9.7e-22
Identities = 13/32 (40%), Positives = 24/32 (75%)
Query: 1 MSPQYLDIMRKKAHLMIRMLEHRIGFELILQL 32
+S +Y + + KAHL++R++E+RI E +LQ+
Sbjct: 441 LSWEYYTMFQCKAHLVMRLIENRISMEFMLQV 472
>WB|WBGene00006383 [details] [associations]
symbol:taf-2 species:6239 "Caenorhabditis elegans"
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] InterPro:IPR014782 Pfam:PF01433
GO:GO:0009792 GO:GO:0008270 GO:GO:0045944 GO:GO:0008237
eggNOG:COG0308 GeneTree:ENSGT00390000000420 KO:K03128 OMA:PCVDSFA
EMBL:FO080119 PIR:T33893 RefSeq:NP_500378.1
ProteinModelPortal:Q9TYN3 IntAct:Q9TYN3 STRING:Q9TYN3 PaxDb:Q9TYN3
EnsemblMetazoa:Y37E11B.4 GeneID:192051 KEGG:cel:CELE_Y37E11B.4
UCSC:Y37E11B.4 CTD:192051 WormBase:Y37E11B.4 HOGENOM:HOG000018552
InParanoid:Q9TYN3 NextBio:951382 Uniprot:Q9TYN3
Length = 1086
Score = 189 (71.6 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 31/86 (36%), Positives = 54/86 (62%)
Query: 74 SDSPVLWIRLDPEMTIIRSVVIEQPDYQWQYQLRHERDVTAQFDAIRALERFPXXXXXXX 133
++SP+LW+R+DP+ +IR + I QP + W+Y LR+ERDV AQ +A+ ++ P
Sbjct: 657 AESPILWLRIDPDYLLIREITISQPMFHWEYMLRYERDVIAQMEALERIQALPSAHSRSV 716
Query: 134 XXXXIESERAYVQVRCKAAQALTKVK 159
+ +E+ + ++R +AA LT V+
Sbjct: 717 IVDAVANEKFFYRIRYRAAFVLTFVQ 742
Score = 71 (30.1 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 2 SPQYLDIMRKKAHLMIRMLEHRIGFELILQL 32
SP Y++ M KK L +RML+ RIG E +++
Sbjct: 477 SPLYVEAMLKKGFLTMRMLQRRIGLEPFMRV 507
>DICTYBASE|DDB_G0292724 [details] [associations]
symbol:taf2 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
InterPro:IPR014782 Pfam:PF01433 dictyBase:DDB_G0292724
GenomeReviews:CM000155_GR EMBL:AAFI02000194 GO:GO:0008270
eggNOG:COG0308 GO:GO:0004222 GO:GO:0006366 GO:GO:0003743
GO:GO:0005669 KO:K03128 RefSeq:XP_002649090.1
EnsemblProtists:DDB0304679 GeneID:8628785 KEGG:ddi:DDB_G0292724
OMA:DRDKEHR Uniprot:C7G081
Length = 2044
Score = 172 (65.6 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 75 DSPVLWIRLDPEMTIIRSVVIEQPDYQWQYQLRHERDVTAQFDAIRALERFPXXXXXXXX 134
++P+LW R+DPE+ I + QP+Y W +QL +RDV AQ +AI+ L+ +
Sbjct: 707 ETPLLWFRIDPELEWIHRITFRQPEYMWIHQLELDRDVIAQMEAIKGLKDYISFNSVRAV 766
Query: 135 XXXIESERAYVQVRCKAAQALTKV 158
I++ R + +VRC AA L+K+
Sbjct: 767 FKFIQNSRYFYRVRCDAAMLLSKL 790
Score = 44 (20.5 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 5 YLDIMRKKAHLMIRMLEHRIGFE 27
Y ++ ++K+ L+I M+E RI E
Sbjct: 458 YSELAQRKSPLVIYMIEKRISEE 480
>TAIR|locus:2031571 [details] [associations]
symbol:TAF2 "TBP-associated factor 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR014782 Pfam:PF01433 EMBL:CP002684 GO:GO:0009506
GO:GO:0008270 GO:GO:0004222 KO:K03128 OMA:YNDNSGN EMBL:AY102124
IPI:IPI00546623 RefSeq:NP_177536.2 UniGene:At.21897
ProteinModelPortal:Q8LPF0 IntAct:Q8LPF0 STRING:Q8LPF0 PRIDE:Q8LPF0
EnsemblPlants:AT1G73960.1 GeneID:843733 KEGG:ath:AT1G73960
TAIR:At1g73960 HOGENOM:HOG000084774 InParanoid:Q8LPF0
PhylomeDB:Q8LPF0 ProtClustDB:CLSN2690496 Genevestigator:Q8LPF0
Uniprot:Q8LPF0
Length = 1390
Score = 118 (46.6 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 28/85 (32%), Positives = 40/85 (47%)
Query: 75 DSPVLWIRLDPEMTIIRSVVIEQPDYQWQYQLRHERDVTAQFDAIRALERFPXXXXXXXX 134
+SP+ WI+ DPEM I + + QP W QL + DV AQ AI +LE
Sbjct: 636 ESPLAWIKADPEMEYIAEIHLHQPLQMWVNQLEKDGDVVAQAQAIASLEALKQHSFSIVN 695
Query: 135 XXX--IESERAYVQVRCKAAQALTK 157
+ + + ++R AA AL K
Sbjct: 696 ALKNVLTDSKVFWRIRIAAAFALAK 720
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.328 0.139 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 172 146 0.00079 103 3 11 22 0.36 31
30 0.49 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 550 (59 KB)
Total size of DFA: 132 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.44u 0.08s 10.52t Elapsed: 00:00:06
Total cpu time: 10.44u 0.08s 10.52t Elapsed: 00:00:09
Start: Thu Aug 15 12:13:07 2013 End: Thu Aug 15 12:13:16 2013