RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy13489
         (172 letters)



>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces
           salmonicolor [TaxId: 5005]}
          Length = 342

 Score = 29.4 bits (64), Expect = 0.23
 Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 7/62 (11%)

Query: 82  RLDPEMTIIRSVVIEQPDYQWQYQLRHERDVTAQFDAIRALERFPTTTTRLALTDTIESE 141
           +L P  T       +  D         + D     + +++L R    +   ++ D + SE
Sbjct: 288 KLYPSKTFPADFPDQGQD-------LSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSE 340

Query: 142 RA 143
            A
Sbjct: 341 TA 342


>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine
           synthase, catalytic domain {Yeast (Saccharomyces
           kluyveri) [TaxId: 4934]}
          Length = 322

 Score = 26.9 bits (59), Expect = 1.4
 Identities = 8/44 (18%), Positives = 16/44 (36%), Gaps = 2/44 (4%)

Query: 111 DVTAQFDAIRALERFPTTT--TRLALTDTIESERAYVQVRCKAA 152
           +  +QF  +    +        RLA T    + R +    C++ 
Sbjct: 24  ETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESL 67


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.324    0.136    0.395 

Gapped
Lambda     K      H
   0.267   0.0373    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 661,698
Number of extensions: 30084
Number of successful extensions: 70
Number of sequences better than 10.0: 1
Number of HSP's gapped: 70
Number of HSP's successfully gapped: 7
Length of query: 172
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 93
Effective length of database: 1,322,926
Effective search space: 123032118
Effective search space used: 123032118
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (24.0 bits)