Query psy13490
Match_columns 138
No_of_seqs 109 out of 169
Neff 4.9
Searched_HMMs 29240
Date Fri Aug 16 20:43:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13490.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13490hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xdt_A Endoplasmic reticulum a 99.6 7.8E-15 2.7E-19 135.1 11.3 128 6-137 184-316 (897)
2 3b34_A Aminopeptidase N; prote 99.6 9.2E-15 3.1E-19 135.5 9.8 130 5-137 189-326 (891)
3 2gtq_A Aminopeptidase N; alani 99.5 1.8E-14 6E-19 132.9 10.6 129 6-137 165-301 (867)
4 3ebh_A PFA-M1, M1 family amino 99.5 1.9E-14 6.6E-19 133.6 9.0 130 5-137 171-309 (889)
5 3se6_A Endoplasmic reticulum a 99.5 7.1E-14 2.4E-18 130.3 11.2 129 5-137 245-378 (967)
6 1z5h_A Tricorn protease intera 99.4 2.8E-13 9.6E-18 123.2 7.7 127 6-137 145-273 (780)
7 3cia_A Cold-active aminopeptid 99.4 4E-13 1.4E-17 118.8 8.1 116 9-137 192-308 (605)
8 2xq0_A LTA-4 hydrolase, leukot 99.4 1.4E-13 4.9E-18 122.5 4.9 117 8-137 191-309 (632)
9 3u9w_A Leukotriene A-4 hydrola 99.4 3.2E-13 1.1E-17 119.5 6.0 118 7-137 183-301 (608)
10 4fke_A Aminopeptidase N; zinc 99.3 9E-13 3.1E-17 121.5 7.0 128 6-137 196-330 (909)
11 4fgm_A Aminopeptidase N family 94.6 0.069 2.4E-06 47.5 6.8 101 27-137 169-281 (597)
12 4g6x_A Glyoxalase/bleomycin re 23.3 36 0.0012 23.2 1.7 17 61-77 34-50 (155)
13 2kep_A General secretion pathw 22.3 82 0.0028 21.8 3.4 26 56-82 11-36 (110)
14 3gn9_A Type II secretory pathw 21.0 94 0.0032 21.9 3.5 27 55-82 12-38 (115)
No 1
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein, metal-binding, metalloprotease, protease, hydrolase, adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB: 2yd0_A* 3qnf_A* 3mdj_A*
Probab=99.57 E-value=7.8e-15 Score=135.12 Aligned_cols=128 Identities=14% Similarity=0.118 Sum_probs=109.5
Q ss_pred CCCeeEEEecccCCCcceeeeeeecCCCceEeeC--CCCCeEEEEeCCCCchhHhhHHHHHHHHHHHHHHHhcCCCCCCc
Q psy13490 6 ANPKFQHSDHQVCFFPHNIQILGGHRIPFDIYVD--PFMHEVTHFCLPPLKDLLKVSVRHVHQMFEFFEETLSNRYPYPC 83 (138)
Q Consensus 6 ~~~k~~~y~~~~p~~a~~Ig~AvG~~~pFe~~~d--p~~~~vt~fcLPg~~~~l~~T~~~~~~a~~ffe~~~g~syPf~s 83 (138)
++.++++|....|++++.++|+|| +|+.+.+ ....++..||.|+..+..+.+...+.++++|||++||.+|||+.
T Consensus 184 ~g~~~~~f~~t~pmstYL~a~~vg---~f~~~~~~~~~gv~v~v~~~~~~~~~~~~al~~~~~~l~~~e~~fg~~YP~~k 260 (897)
T 2xdt_A 184 EGLIEDHFDVTVKMSTYLVAFIIS---DFESVSKITKSGVKVSVYAVPDKINQADYALDAAVTLLEFYEDYFSIPYPLPK 260 (897)
T ss_dssp TTEEEEEECCCCSBCGGGCCEEEE---CCEEEEEECTTCCEEEEEECTTTGGGCHHHHHHHHHHHHHHHHHTTCCCCSSE
T ss_pred CCEEEEEEeCCCccchhheEEEEE---cceeeccccCCCeeEEEEcCCChHHHHHHHHHHHHHHHHHHHHHhCCCCCccc
Confidence 456889999999999999999999 9999976 45689999999999999999999999999999999999999999
Q ss_pred ceEEeecCcccccccceeeeeec-CCCCccccccccc-h-hhHHHHhHhcCcccccc
Q psy13490 84 YKQVFVDSTVTDVTAYASMSILS-SDSPVLWIRLDPE-M-TIIRSVVIEQPDYQWHF 137 (138)
Q Consensus 84 yk~VFVd~~~~~~~~~Aslsi~s-s~LL~~~~iIDp~-~-~~tR~l~~~~lA~QW~~ 137 (138)
|.+|+|++.....+-..||.++. +.|||.++..+.. . ...+.+.| .+|.|||-
T Consensus 261 ~d~v~vpdf~~GaMEn~glit~~e~~ll~~~~~~~~~~~~~~~~viaH-ElAHqWFG 316 (897)
T 2xdt_A 261 QDLAAIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLGITMTVAH-ELAHQWFG 316 (897)
T ss_dssp EEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHH-HHHTTTBT
T ss_pred eeEEEeCCCcccchhcCCeeEEeeeeEeECCCCCcHHHHHHHHHHHHH-HHHHHHcC
Confidence 99999999877777778998887 4588888776542 2 33444555 59999995
No 2
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=99.55 E-value=9.2e-15 Score=135.51 Aligned_cols=130 Identities=14% Similarity=0.066 Sum_probs=107.9
Q ss_pred cCCCeeEEEecccCCCcceeeeeeecCCCceEeeCC----C--CCeEEEEeCCCCchhHhhHHHHHHHHHHHHHHHhcCC
Q psy13490 5 KANPKFQHSDHQVCFFPHNIQILGGHRIPFDIYVDP----F--MHEVTHFCLPPLKDLLKVSVRHVHQMFEFFEETLSNR 78 (138)
Q Consensus 5 ~~~~k~~~y~~~~p~~a~~Ig~AvG~~~pFe~~~dp----~--~~~vt~fcLPg~~~~l~~T~~~~~~a~~ffe~~~g~s 78 (138)
++++++++|....|++++.++|+|| +|+.+.+. . .+++..||.|+..+..+.....+.++++|||+.||..
T Consensus 189 ~~g~~~~~f~~t~pmstYL~A~~vG---~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~al~~~~~~l~~~e~~fG~p 265 (891)
T 3b34_A 189 ENGRHWVQWQDPFPKPCYLFALVAG---DFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNSMKWDEERFGLE 265 (891)
T ss_dssp STTEEEEEEEEEEEECGGGCCEEEE---CCEEEEEEEECTTCCEEEEEEEECTTCGGGCHHHHHHHHHHHHHHHHHHCCC
T ss_pred cCCeEEEEEEeCCCccceeeEEEec---cceEEeeeeeccCCCceEEEEEeccCcHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3456889999999999999999999 99999762 2 3689999999999999999999999999999999999
Q ss_pred CCCCcceEEeecCcccccccceeeeeecC-CCCccccc-cccchhhHHHHhHhcCcccccc
Q psy13490 79 YPYPCYKQVFVDSTVTDVTAYASMSILSS-DSPVLWIR-LDPEMTIIRSVVIEQPDYQWHF 137 (138)
Q Consensus 79 yPf~syk~VFVd~~~~~~~~~Aslsi~ss-~LL~~~~i-IDp~~~~tR~l~~~~lA~QW~~ 137 (138)
|||+.|.+|+|++.....+-..||.+++. .+|+.++. .|..+.....++.+.+|.|||-
T Consensus 266 YP~~k~diVavPdf~~GaMEn~GLitf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHqWFG 326 (891)
T 3b34_A 266 YDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWTG 326 (891)
T ss_dssp CCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBT
T ss_pred CCCcceeEEEcCCCCcCccccCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999998877888889988776 46666543 3344443444555569999985
No 3
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=99.54 E-value=1.8e-14 Score=132.93 Aligned_cols=129 Identities=12% Similarity=0.076 Sum_probs=107.0
Q ss_pred CCCeeEEEecccCCCcceeeeeeecCCCceEeeCC----C--CCeEEEEeCCCCchhHhhHHHHHHHHHHHHHHHhcCCC
Q psy13490 6 ANPKFQHSDHQVCFFPHNIQILGGHRIPFDIYVDP----F--MHEVTHFCLPPLKDLLKVSVRHVHQMFEFFEETLSNRY 79 (138)
Q Consensus 6 ~~~k~~~y~~~~p~~a~~Ig~AvG~~~pFe~~~dp----~--~~~vt~fcLPg~~~~l~~T~~~~~~a~~ffe~~~g~sy 79 (138)
+++++++|....|++++.++|+|| +|+.+.+. . .+++..||.|+..+..+.....+.++++|||+.||..|
T Consensus 165 ~g~~~~~f~~t~pmstYL~A~~vG---~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~al~~~~~~l~~~e~~fG~pY 241 (867)
T 2gtq_A 165 DGRHWVKWEDPFSKPSYLFALVAG---DLAVTEDYFTTMSGRNVKIEFYTTEADKPKVGFAVESLKNAMKWDETRFGLEY 241 (867)
T ss_dssp TSEEEEEEECCSCBCGGGCCEEEE---CCEEEEEEEECTTSCEEEEEEEECTTTGGGCHHHHHHHHHHHHHHHHHHCCCC
T ss_pred CCeEEEEEEeCCCccccceeEEEe---cceEeeeceeccCCCceEEEEEeccccHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 445789999999999999999999 99999762 2 36899999999999999999999999999999999999
Q ss_pred CCCcceEEeecCcccccccceeeeeecC-CCCccccc-cccchhhHHHHhHhcCcccccc
Q psy13490 80 PYPCYKQVFVDSTVTDVTAYASMSILSS-DSPVLWIR-LDPEMTIIRSVVIEQPDYQWHF 137 (138)
Q Consensus 80 Pf~syk~VFVd~~~~~~~~~Aslsi~ss-~LL~~~~i-IDp~~~~tR~l~~~~lA~QW~~ 137 (138)
||+.|.+|+|++.....+-..||.++++ .+|+.++. .|........++.+.+|.|||-
T Consensus 242 P~~k~d~Vavpdf~~GaMEn~glitf~e~~ll~~~~~~~~~~~~~i~~vIaHElAHqWfG 301 (867)
T 2gtq_A 242 DLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWTG 301 (867)
T ss_dssp CSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBT
T ss_pred CCcceeEEEcCCCCccccccCCceeecccccccCcccCcHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999998777788888987764 56666543 3334443444555569999985
No 4
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=99.52 E-value=1.9e-14 Score=133.57 Aligned_cols=130 Identities=12% Similarity=0.012 Sum_probs=107.5
Q ss_pred cCCCeeEEEecccCCCcceeeeeeecCCCceEeeCC-----CC--CeEEEEeCCCCchhHhhHHHHHHHHHHHHHHHhcC
Q psy13490 5 KANPKFQHSDHQVCFFPHNIQILGGHRIPFDIYVDP-----FM--HEVTHFCLPPLKDLLKVSVRHVHQMFEFFEETLSN 77 (138)
Q Consensus 5 ~~~~k~~~y~~~~p~~a~~Ig~AvG~~~pFe~~~dp-----~~--~~vt~fcLPg~~~~l~~T~~~~~~a~~ffe~~~g~ 77 (138)
.++.++++|....|++.+.++|+|| +|+.+.+. .. +++..||.|+..+..+.....+.++++|||++||.
T Consensus 171 ~~g~~~~~f~~t~pmstYLvA~~vG---~f~~~~~~~~t~~~G~~v~l~vy~~p~~~~~~~~al~~~~~~l~~~e~~fG~ 247 (889)
T 3ebh_A 171 PGGRHGARFNDPPLKPCYLFAVVAG---DLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECLKKSMAFDEDYFGL 247 (889)
T ss_dssp TTTEEEEEEEEEEEECGGGCCEEEE---CEEEEEEEEECSSSCCEEEEEEEEEGGGGGGGHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCeEEEEEecCCccchhheeeEEe---cceEEeeeeeecCCCCceEEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 3455789999999999999999999 99998752 22 57899999999999999999999999999999999
Q ss_pred CCCCCcceEEeecCcccccccceeeeeecC-CCCcccc-ccccchhhHHHHhHhcCcccccc
Q psy13490 78 RYPYPCYKQVFVDSTVTDVTAYASMSILSS-DSPVLWI-RLDPEMTIIRSVVIEQPDYQWHF 137 (138)
Q Consensus 78 syPf~syk~VFVd~~~~~~~~~Aslsi~ss-~LL~~~~-iIDp~~~~tR~l~~~~lA~QW~~ 137 (138)
.|||+.|.+|+|++.....+-..||.++.. .+|+.++ ..|...+....++.+.+|.|||-
T Consensus 248 pYP~~kyd~VavPdF~~GaMEN~GLvtf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHQWFG 309 (889)
T 3ebh_A 248 EYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTG 309 (889)
T ss_dssp CCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTSCTHHHHHHHHHHHHHHHTTTBT
T ss_pred CCCCCceEEEEeccccchhhcCCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999998877888889988766 4666654 34554543444444569999985
No 5
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=99.50 E-value=7.1e-14 Score=130.29 Aligned_cols=129 Identities=9% Similarity=0.091 Sum_probs=108.3
Q ss_pred cCCCeeEEEecccCCCcceeeeeeecCCCceEeeC--CCCCeEEEEeCCCCchhHhhHHHHHHHHHHHHHHHhcCCCCCC
Q psy13490 5 KANPKFQHSDHQVCFFPHNIQILGGHRIPFDIYVD--PFMHEVTHFCLPPLKDLLKVSVRHVHQMFEFFEETLSNRYPYP 82 (138)
Q Consensus 5 ~~~~k~~~y~~~~p~~a~~Ig~AvG~~~pFe~~~d--p~~~~vt~fcLPg~~~~l~~T~~~~~~a~~ffe~~~g~syPf~ 82 (138)
.++.++++|....|++.+.++|+|| +|+.+.+ ....++..||.|+..+..+.......++++|||++||.+|||+
T Consensus 245 ~~g~~~~~F~~t~pmstYLva~~vg---~f~~~~~~~~~gv~v~v~~~p~~~~~~~~al~~~~~~l~~~e~~fg~~YP~~ 321 (967)
T 3se6_A 245 EGGLLEDHFETTVKMSTYLVAYIVC---DFHSLSGFTSSGVKVSIYASPDKRNQTHYALQASLKLLDFYEKYFDIYYPLS 321 (967)
T ss_dssp TTSCEEEEECCCCSBCGGGCCEEEE---CCEEEEEECTTCCEEEEEECGGGGGGGHHHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred CCCeEEEEEecCCCccceeEEEEEe---ceEEEEeecCCCcEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Confidence 4567899999999999999999999 9999975 4568999999999999999999999999999999999999999
Q ss_pred cceEEeecCcccccccceeeeeecC-CCCccccccccc--hhhHHHHhHhcCcccccc
Q psy13490 83 CYKQVFVDSTVTDVTAYASMSILSS-DSPVLWIRLDPE--MTIIRSVVIEQPDYQWHF 137 (138)
Q Consensus 83 syk~VFVd~~~~~~~~~Aslsi~ss-~LL~~~~iIDp~--~~~tR~l~~~~lA~QW~~ 137 (138)
.|.+|.|++.....+-..||.++.. .||+.++.-+.. ....+.+.| .+|.|||-
T Consensus 322 k~d~v~vPdf~~GaMEn~Glity~e~~ll~d~~~s~~~~k~~~~~vIaH-ElAHqWFG 378 (967)
T 3se6_A 322 KLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAH-ELAHQWFG 378 (967)
T ss_dssp EEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHH-HHGGGTBT
T ss_pred cccEEEecCCCCcccccCCccccchhheecCcccCCHHhhHhHHHHHHH-HHHHHHhc
Confidence 9999999998877777888888765 567776643322 223444555 59999995
No 6
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=99.41 E-value=2.8e-13 Score=123.17 Aligned_cols=127 Identities=11% Similarity=0.018 Sum_probs=99.9
Q ss_pred CCCeeEEEecccCCCcceeeeeeecCCCceEeeCCC-CCeEEEEeCCCCchhHhhHHHHHHHHHHHHHHHhcCCCCCCcc
Q psy13490 6 ANPKFQHSDHQVCFFPHNIQILGGHRIPFDIYVDPF-MHEVTHFCLPPLKDLLKVSVRHVHQMFEFFEETLSNRYPYPCY 84 (138)
Q Consensus 6 ~~~k~~~y~~~~p~~a~~Ig~AvG~~~pFe~~~dp~-~~~vt~fcLPg~~~~l~~T~~~~~~a~~ffe~~~g~syPf~sy 84 (138)
++.++++|....|++.+.++|+|| +|+...+.. ..++..||.|+ +..+.+...+.++++||++.||.+|||+.|
T Consensus 145 ~g~~~~~f~~t~~mstYL~a~~vg---~f~~~~~~~~gv~~~v~~~~~--~~~~~al~~~~~~l~~~e~~fg~~YP~~k~ 219 (780)
T 1z5h_A 145 SERKVVEFQDTPRMSTYLLYVGIG---KFRYEYEKYRDIDLILASLKD--IRSKYPLDMARKSVEFYENYFGIPYALPKM 219 (780)
T ss_dssp SSSEEEEECCCCSBCGGGCCEEEE---CCEEEEEEETTEEEEEEESSC--CCCSHHHHHHHHHHHHHHHHHSSCCSSSEE
T ss_pred CCceEEEEecCCcccceEEEEEEe---ccEEEeeccCCeeEEEEEccc--hhHHHHHHHHHHHHHHHHHHhCCCCCCccC
Confidence 456899999999999999999999 999997532 68899999999 667888999999999999999999999999
Q ss_pred eEEeecCcccccccceeeeeec-CCCCccccccccchhhHHHHhHhcCcccccc
Q psy13490 85 KQVFVDSTVTDVTAYASMSILS-SDSPVLWIRLDPEMTIIRSVVIEQPDYQWHF 137 (138)
Q Consensus 85 k~VFVd~~~~~~~~~Aslsi~s-s~LL~~~~iIDp~~~~tR~l~~~~lA~QW~~ 137 (138)
.+|+|++.....+-..||.++. +.+|+.+..-+...+....++.+.+|.|||-
T Consensus 220 d~v~vpdf~~GaMEn~glit~~e~~ll~~~~~~~~~~~~~~~viaHElaHqWfG 273 (780)
T 1z5h_A 220 HLISVPEFGAGAMENWGAITFREIYMDIAENSAVTVKRNSANVIAHEIAHQWFG 273 (780)
T ss_dssp EEEEETTCTTCEECCTTEEEEEHHHHSCCTTSCHHHHHHHHHHHHHHHHHTTBT
T ss_pred CEEEcCCCCCCcccccCeeEeecceEeecCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 9999998765556666775554 4577763222222222334444459999985
No 7
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}
Probab=99.40 E-value=4e-13 Score=118.78 Aligned_cols=116 Identities=12% Similarity=0.089 Sum_probs=96.0
Q ss_pred eeEEEecccCCCcceeeeeeecCCCceEeeCCCCCeEEEEeCCCCchhHhhHHHHHHHHHHHHHHHhcCCCCCCcceEEe
Q psy13490 9 KFQHSDHQVCFFPHNIQILGGHRIPFDIYVDPFMHEVTHFCLPPLKDLLKVSVRHVHQMFEFFEETLSNRYPYPCYKQVF 88 (138)
Q Consensus 9 k~~~y~~~~p~~a~~Ig~AvG~~~pFe~~~dp~~~~vt~fcLPg~~~~l~~T~~~~~~a~~ffe~~~g~syPf~syk~VF 88 (138)
++++|....|++++.++|+|| +|+...+ ..++..||.|+..+..+.....+.++++|||+.|| +|||+.|.+|+
T Consensus 192 ~~~~f~~t~pmstYl~a~~vg---~f~~~~~--g~~~~v~~~p~~~~~~~~~~~~~~~~l~~~e~~fG-~YP~~k~d~v~ 265 (605)
T 3cia_A 192 GDYFFSMPQAIPPYLIAIGVG---DLEFKAM--SHQTGIYAESYILDAAVAEFDDTQAMIDKAEQMYG-KYRWGRYDLLM 265 (605)
T ss_dssp SEEEEEEEEEECGGGCCEEEE---SCEEEES--SSSEEEEECSTTHHHHHHHSTTHHHHHHHHHHHHC-CCTTSCEEEEE
T ss_pred CeEEEeeCCCccceeEEEEEe---eeeEecC--CCeEEEEeccChHHHHHHHHHHHHHHHHHHHHHhC-CCCCccccEEE
Confidence 589999999999999999999 9999975 35689999999999999999999999999999999 99999999999
Q ss_pred ec-CcccccccceeeeeecCCCCccccccccchhhHHHHhHhcCcccccc
Q psy13490 89 VD-STVTDVTAYASMSILSSDSPVLWIRLDPEMTIIRSVVIEQPDYQWHF 137 (138)
Q Consensus 89 Vd-~~~~~~~~~Aslsi~ss~LL~~~~iIDp~~~~tR~l~~~~lA~QW~~ 137 (138)
++ +.....+-..||++.+..+|.... +.++.+.|+ +|.|||-
T Consensus 266 ~p~~f~~GgMEn~gltf~~~~ll~~~~------~~~~viaHE-laHqWfG 308 (605)
T 3cia_A 266 LPPSFPFGGMENPRLSFITPTVVAGDK------SLVNLIAHE-LAHSWSG 308 (605)
T ss_dssp CCTTCSSSEECCTTEEEECGGGCCSSS------CSTHHHHHH-HHHTTBT
T ss_pred ECCccCCCcccCCcEEEecchhccCcH------HHHHHHHHH-HHHHhhc
Confidence 95 655444444577777777776532 224556664 8999985
No 8
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*
Probab=99.40 E-value=1.4e-13 Score=122.51 Aligned_cols=117 Identities=12% Similarity=0.028 Sum_probs=96.8
Q ss_pred CeeEEEecccCCCcceeeeeeecCCCceEeeCCCCCeEEEEeCCCCchhHhhHHH-HHHHHHHHHHHHhcCCCCCCcceE
Q psy13490 8 PKFQHSDHQVCFFPHNIQILGGHRIPFDIYVDPFMHEVTHFCLPPLKDLLKVSVR-HVHQMFEFFEETLSNRYPYPCYKQ 86 (138)
Q Consensus 8 ~k~~~y~~~~p~~a~~Ig~AvG~~~pFe~~~dp~~~~vt~fcLPg~~~~l~~T~~-~~~~a~~ffe~~~g~syPf~syk~ 86 (138)
.++++|....|++++.++|||| +|+...+ ..++..||.|+..+..+.... .+.++++|||+.+| +|||+.|.+
T Consensus 191 ~~~~~F~~t~pmstYLva~~vg---~f~~~~~--g~~~~v~~~p~~~~~~~~~~~~~~~~~l~~~e~~fG-pYP~~k~d~ 264 (632)
T 2xq0_A 191 TNIYRFEQKVPIPAYLIGIASG---DLSSAPI--GPRSTVYTEPFRLKDCQWEFENDVEKFIQTAEKIIF-EYEWGTYDI 264 (632)
T ss_dssp -CEEEEEEEEEECGGGCCEEES---SCEEEEE--ETTEEEEECHHHHHHHHHHHTTTHHHHHHHHHHHSC-CCCSSCCCE
T ss_pred CCeEEEEeCCccchhheeeeEe---cceeecc--CCeeEEEEccchHHHHHHHHHHHHHHHHHHHHHhcc-cCCcccccE
Confidence 3589999999999999999999 9999975 356889999999998888888 89999999999999 999999999
Q ss_pred Eeec-CcccccccceeeeeecCCCCccccccccchhhHHHHhHhcCcccccc
Q psy13490 87 VFVD-STVTDVTAYASMSILSSDSPVLWIRLDPEMTIIRSVVIEQPDYQWHF 137 (138)
Q Consensus 87 VFVd-~~~~~~~~~Aslsi~ss~LL~~~~iIDp~~~~tR~l~~~~lA~QW~~ 137 (138)
|+++ +.+...+...||++.+..+|.... +.++.+.| .+|.|||.
T Consensus 265 v~~pp~f~~GgMEn~glt~~~~~ll~~~~------~~~~viaH-ElAHqWfG 309 (632)
T 2xq0_A 265 LVNVDSYPYGGMESPNMTFATPTLLAHDR------SNIDVIAH-ELAHSWSG 309 (632)
T ss_dssp EECCTTCCSSEECCTTCEEECGGGCCSSS------CSTHHHHH-HHHHTTBT
T ss_pred EEECCCCCCCccccceEEEeeceeccCch------hHHHHHHH-HHHHHHhc
Confidence 9995 666555555678888777776542 22455666 48999985
No 9
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=99.38 E-value=3.2e-13 Score=119.50 Aligned_cols=118 Identities=10% Similarity=0.004 Sum_probs=99.4
Q ss_pred CCeeEEEecccCCCcceeeeeeecCCCceEeeCCCCCeEEEEeCCCCchhHhhHHHHHHHHHHHHHHHhcCCCCCCcceE
Q psy13490 7 NPKFQHSDHQVCFFPHNIQILGGHRIPFDIYVDPFMHEVTHFCLPPLKDLLKVSVRHVHQMFEFFEETLSNRYPYPCYKQ 86 (138)
Q Consensus 7 ~~k~~~y~~~~p~~a~~Ig~AvG~~~pFe~~~dp~~~~vt~fcLPg~~~~l~~T~~~~~~a~~ffe~~~g~syPf~syk~ 86 (138)
++|+++|....|++++.++|||| +|+...+ ..++..|+.|+..+..+.....+.++++|||+.+| .|||+.|.+
T Consensus 183 ~~~~~~f~~t~pmstYL~a~~vg---~f~~~~~--~~~~~v~~~p~~~~~~~~~~~~~~~~l~~~e~~~g-~Yp~~~~~~ 256 (608)
T 3u9w_A 183 SRKIYKFIQKVPIPCYLIALVVG---ALESRQI--GPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLGG-PYVWGQYDL 256 (608)
T ss_dssp TEEEEEEEEEEEECGGGCCEEEE---SCEEEEE--ETTEEEEECHHHHHHHHHHTTTHHHHHHHHHHHHC-CCCSSCCEE
T ss_pred CeEEEEEEecCCcccEEEEEEEe---eeeeEec--CCceEEEeChhhHHHHHHHHHHHHHHHHhHHhcCC-CCCchhhce
Confidence 45899999999999999999999 9998754 35677999999999999999999999999999999 999999999
Q ss_pred Eee-cCcccccccceeeeeecCCCCccccccccchhhHHHHhHhcCcccccc
Q psy13490 87 VFV-DSTVTDVTAYASMSILSSDSPVLWIRLDPEMTIIRSVVIEQPDYQWHF 137 (138)
Q Consensus 87 VFV-d~~~~~~~~~Aslsi~ss~LL~~~~iIDp~~~~tR~l~~~~lA~QW~~ 137 (138)
+++ ++.+...+-..||.+++..+|.....+ .+.+.|| ||.|||.
T Consensus 257 vv~~p~f~~GgMEn~gl~~~~~~~l~~~~~~------~~viaHE-lAHqWfG 301 (608)
T 3u9w_A 257 LVLPPSFPYGGMENPCLTFVTPTLLAGDKSL------SNVIAHE-ISHSWTG 301 (608)
T ss_dssp EECCTTCSSSEECCTTEEEECGGGCCSSSTT------THHHHHH-HHTTTBT
T ss_pred eeecccccchhhhcCcceeeeeeeecccchh------HHHHHHH-hhhhhhc
Confidence 988 566666666678999988888765433 2345565 8999995
No 10
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=99.35 E-value=9e-13 Score=121.49 Aligned_cols=128 Identities=9% Similarity=0.040 Sum_probs=102.1
Q ss_pred CCCeeEEEecccCCCcceeeeeeecCCCceEeeC--CCCCeEEEEeCCCCchhHh--hHHHHHHHHHHHHHHHhcCCCCC
Q psy13490 6 ANPKFQHSDHQVCFFPHNIQILGGHRIPFDIYVD--PFMHEVTHFCLPPLKDLLK--VSVRHVHQMFEFFEETLSNRYPY 81 (138)
Q Consensus 6 ~~~k~~~y~~~~p~~a~~Ig~AvG~~~pFe~~~d--p~~~~vt~fcLPg~~~~l~--~T~~~~~~a~~ffe~~~g~syPf 81 (138)
.+.++++|....|++.+.++|+|| +|+.+.+ ....++..||.|+..+..+ .......++++|||+++|..|||
T Consensus 196 ~~~~~~~f~~t~pmstYL~a~~vg---~f~~~~~~~~~g~~~~v~~~p~~~~~~~~~~al~~~~~~l~~~e~~~~~~Yp~ 272 (909)
T 4fke_A 196 PNWSVTEFETTPVMSTYLLAYIVS---EFQSVNETAQNGVLIRIWARPNAIAEGHGMYALNVTGPILNFFANHYNTSYPL 272 (909)
T ss_dssp TTEEEEEBCCCCSBCGGGCCEEEE---SCEEEEEECTTSCEEEEEECHHHHHTTTTHHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred CCeEEEEEecCCCccceeeEEEec---ceEEEeeccCCCcEEEEEEecchhhhhhHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 345899999999999999999999 9999965 4568999999999766544 66788999999999999889999
Q ss_pred CcceEEeecCcccccccceeeeeec-CCCCccccccccch--hhHHHHhHhcCcccccc
Q psy13490 82 PCYKQVFVDSTVTDVTAYASMSILS-SDSPVLWIRLDPEM--TIIRSVVIEQPDYQWHF 137 (138)
Q Consensus 82 ~syk~VFVd~~~~~~~~~Aslsi~s-s~LL~~~~iIDp~~--~~tR~l~~~~lA~QW~~ 137 (138)
+.|.+|.|++.....+-..||.++. +.||+.++.-+... ...+.+.| .||.|||.
T Consensus 273 ~k~d~v~vpdf~~gaMEn~glit~~e~~ll~d~~~s~~~~~~~~~~viaH-ElAHqWFG 330 (909)
T 4fke_A 273 PKSDQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAH-ELAHQWFG 330 (909)
T ss_dssp SEEEEEEETTCTTCEECCTTEEEEEHHHHCCCTTTCCHHHHHHHHHHHHH-HHHTTTBT
T ss_pred CcccEEEecCCCCcccccCcccccccceeecCcccCChHHHHHHHHHHHH-HHHhhhhc
Confidence 9999999999877777667777665 45777766543322 22334455 59999995
No 11
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=94.58 E-value=0.069 Score=47.47 Aligned_cols=101 Identities=10% Similarity=0.034 Sum_probs=56.5
Q ss_pred eeecCCCceEeeC-CCCCeEEEEeCCCCchhHhhHHHHHHHHHHHHHHHhcCCCCCCcceEEee--cCcccccccceeee
Q psy13490 27 LGGHRIPFDIYVD-PFMHEVTHFCLPPLKDLLKVSVRHVHQMFEFFEETLSNRYPYPCYKQVFV--DSTVTDVTAYASMS 103 (138)
Q Consensus 27 AvG~~~pFe~~~d-p~~~~vt~fcLPg~~~~l~~T~~~~~~a~~ffe~~~g~syPf~syk~VFV--d~~~~~~~~~Asls 103 (138)
.+| +|++... ....++....-+........-...+.++++++++.|| .|||..|..+.+ +. .+-||-
T Consensus 169 ~~G---~~~~~~~~~~g~p~~l~v~~~~~~d~~~~~~~~~~~~~~~~~~fG-~yP~~~Y~fl~~~~~~------~~GgmE 238 (597)
T 4fgm_A 169 LIG---DLTIEEFIAHGIKHSLVLSGRHYADTSRITADLAKICETQISLFE-EAPFQSYTFLTMVVGN------GFGGLE 238 (597)
T ss_dssp EEE---SCEEEEEEETTEEEEEEEESSCCCCHHHHHHHHHHHHHHHHHHHT-SCSCSEEEEEEEEESS------CCEEEE
T ss_pred ccc---CcEEEEeccCCeEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHhC-CCCCCceEEEEEccCC------CCcccc
Confidence 567 6766642 2233333222222222356777788999999999999 999999998753 32 233333
Q ss_pred eecCC-CCcccccc--------ccchhhHHHHhHhcCcccccc
Q psy13490 104 ILSSD-SPVLWIRL--------DPEMTIIRSVVIEQPDYQWHF 137 (138)
Q Consensus 104 i~ss~-LL~~~~iI--------Dp~~~~tR~l~~~~lA~QW~~ 137 (138)
--++. ++++++.+ +..+.....++.+.++-||+-
T Consensus 239 h~~st~l~~~~~~l~~~~~~~~~~~~~~~~~liaHE~~H~W~g 281 (597)
T 4fgm_A 239 HRNSTALLCSRKDLISAHQYEMNDNYQTFLSLCCHEYFHSWNI 281 (597)
T ss_dssp CSSEEEEEEEGGGSCCTTCCSCCHHHHHHHHHHHHHHHHTTBT
T ss_pred cCCceEEEeCchhccccccccchhhhhchhhhHhhhhheeecc
Confidence 22221 22333322 112333444555558999974
No 12
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=23.26 E-value=36 Score=23.16 Aligned_cols=17 Identities=18% Similarity=0.216 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHhcC
Q psy13490 61 VRHVHQMFEFFEETLSN 77 (138)
Q Consensus 61 ~~~~~~a~~ffe~~~g~ 77 (138)
+.-+.+|.+||++.||.
T Consensus 34 V~Dle~A~~FY~dvLGf 50 (155)
T 4g6x_A 34 VDDQAKAESFYTGKLGF 50 (155)
T ss_dssp ESCHHHHHHHHHHTTCC
T ss_pred eCCHHHHHHHHHHHhCC
Confidence 34578999999999993
No 13
>2kep_A General secretion pathway protein G; methylation, transport, transport protein; NMR {Pseudomonas aeruginosa}
Probab=22.29 E-value=82 Score=21.84 Aligned_cols=26 Identities=12% Similarity=0.314 Sum_probs=21.7
Q ss_pred hHhhHHHHHHHHHHHHHHHhcCCCCCC
Q psy13490 56 LLKVSVRHVHQMFEFFEETLSNRYPYP 82 (138)
Q Consensus 56 ~l~~T~~~~~~a~~ffe~~~g~syPf~ 82 (138)
..+.-+..+..|++.|....| +||=+
T Consensus 11 ~a~a~i~~l~~Al~~Y~lD~G-~YPtt 36 (110)
T 2kep_A 11 VAKGDIKAIAAALDMYKLDNF-AYPST 36 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHTS-SCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCc
Confidence 455667789999999999999 99954
No 14
>3gn9_A Type II secretory pathway, pseudopilin EPSG; general secretory pathway, major pilin, protein transport, C methylation; 1.86A {Vibrio vulnificus} PDB: 3fu1_A
Probab=21.00 E-value=94 Score=21.88 Aligned_cols=27 Identities=11% Similarity=0.238 Sum_probs=23.0
Q ss_pred hhHhhHHHHHHHHHHHHHHHhcCCCCCC
Q psy13490 55 DLLKVSVRHVHQMFEFFEETLSNRYPYP 82 (138)
Q Consensus 55 ~~l~~T~~~~~~a~~ffe~~~g~syPf~ 82 (138)
..++.-...+..|++-|....| +||=+
T Consensus 12 ~~a~~di~~l~~ALd~Y~lD~G-~YPtt 38 (115)
T 3gn9_A 12 QKAITDIVALENALDMYKLDNS-VYPTT 38 (115)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHS-SCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCCCc
Confidence 4567778889999999999999 99954
Done!