RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy13490
         (138 letters)



>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic
          domain {Human (Homo sapiens) [TaxId: 9606]}
          Length = 252

 Score = 28.8 bits (63), Expect = 0.21
 Identities = 4/44 (9%), Positives = 11/44 (25%), Gaps = 1/44 (2%)

Query: 48 FCLPPLKDLLKVSVRHVHQMFEFFEETLSNRYPYPCYKQVFVDS 91
          +      +           M +  E+     Y +  Y  + +  
Sbjct: 13 WSEKEQVEKSAYEFSETESMLKIAEDLG-GPYVWGQYDLLVLPP 55


>d1u9ya1 c.61.1.2 (A:1-155) Phosphoribosylpyrophosphate synthetase
           {Methanocaldococcus jannaschii [TaxId: 2190]}
          Length = 155

 Score = 25.8 bits (56), Expect = 1.8
 Identities = 8/33 (24%), Positives = 10/33 (30%)

Query: 3   KLKANPKFQHSDHQVCFFPHNIQILGGHRIPFD 35
           +  A       D  +   PH   I     IPF 
Sbjct: 106 RALAKIYSNIVDKLITINPHETHIKDFFTIPFI 138


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.327    0.140    0.457 

Gapped
Lambda     K      H
   0.267   0.0425    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 561,599
Number of extensions: 23864
Number of successful extensions: 65
Number of sequences better than 10.0: 1
Number of HSP's gapped: 65
Number of HSP's successfully gapped: 10
Length of query: 138
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 62
Effective length of database: 1,364,116
Effective search space: 84575192
Effective search space used: 84575192
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 48 (23.0 bits)