BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13491
(69 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|66512323|ref|XP_393066.2| PREDICTED: polyadenylate-binding protein 2 [Apis mellifera]
Length = 228
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 56/72 (77%), Gaps = 7/72 (9%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG-----GPRGRGRGRVSRGAA 57
A+RD VQTAMAMDES+FRGRQIKV PKRTNRPG+S TNRG G RG RG + RG+A
Sbjct: 149 AERDSVQTAMAMDESMFRGRQIKVMPKRTNRPGLSVTNRGPRGTRGYRGIARG-IIRGSA 207
Query: 58 MYGGYRPVRRAR 69
Y GYRP+RR R
Sbjct: 208 -YFGYRPIRRPR 218
>gi|380018099|ref|XP_003692973.1| PREDICTED: polyadenylate-binding protein 2-like [Apis florea]
Length = 228
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 56/72 (77%), Gaps = 7/72 (9%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG-----GPRGRGRGRVSRGAA 57
A+RD VQTAMAMDES+FRGRQIKV PKRTNRPG+S TNRG G RG RG + RG+A
Sbjct: 149 AERDSVQTAMAMDESMFRGRQIKVMPKRTNRPGLSVTNRGPRGTRGYRGIARG-IIRGSA 207
Query: 58 MYGGYRPVRRAR 69
Y GYRP+RR R
Sbjct: 208 -YFGYRPIRRPR 218
>gi|270010566|gb|EFA07014.1| hypothetical protein TcasGA2_TC009984 [Tribolium castaneum]
Length = 225
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 52/68 (76%), Gaps = 3/68 (4%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGA--AMYGG 61
RD VQTAMAMDESLFRGR IKV PKRTNRPG+STTNR PRGRG R +RG Y G
Sbjct: 148 DRDSVQTAMAMDESLFRGRPIKVMPKRTNRPGLSTTNR-PPRGRGAFRGARGVGRGFYAG 206
Query: 62 YRPVRRAR 69
YRP+RR R
Sbjct: 207 YRPMRRPR 214
>gi|326518878|dbj|BAJ92600.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 246
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 55/74 (74%), Gaps = 7/74 (9%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG-GPRGRG--RGR-VSRGAA- 57
A D V TAMAMD+SLFRGRQIKVNPKRTN+PGISTTNR RGR RGR +SRG A
Sbjct: 161 ADMDSVNTAMAMDDSLFRGRQIKVNPKRTNKPGISTTNRPVASRGRAMFRGRPMSRGGAQ 220
Query: 58 --MYGGYRPVRRAR 69
YGGYRP RR R
Sbjct: 221 SSFYGGYRPSRRPR 234
>gi|193678811|ref|XP_001952437.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1
[Acyrthosiphon pisum]
Length = 246
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 55/74 (74%), Gaps = 7/74 (9%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG-GPRGRG--RGR-VSRGAA- 57
A D V TAMAMD+SLFRGRQIKVNPKRTN+PGISTTNR RGR RGR +SRG A
Sbjct: 161 ADMDSVNTAMAMDDSLFRGRQIKVNPKRTNKPGISTTNRPVASRGRAMFRGRPMSRGGAQ 220
Query: 58 --MYGGYRPVRRAR 69
YGGYRP RR R
Sbjct: 221 SSFYGGYRPSRRPR 234
>gi|383855268|ref|XP_003703137.1| PREDICTED: polyadenylate-binding protein 2-like [Megachile
rotundata]
Length = 228
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 55/72 (76%), Gaps = 7/72 (9%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG-----GPRGRGRGRVSRGAA 57
A+RD VQTAMAMDES+FRGRQIKV PKRTNRPG+S TNRG G RG RG + RG+A
Sbjct: 149 AERDSVQTAMAMDESMFRGRQIKVMPKRTNRPGLSVTNRGPRGTRGYRGVARG-IIRGSA 207
Query: 58 MYGGYRPVRRAR 69
Y GYRP RR R
Sbjct: 208 -YFGYRPTRRPR 218
>gi|340716338|ref|XP_003396656.1| PREDICTED: polyadenylate-binding protein 2-like [Bombus terrestris]
gi|350406230|ref|XP_003487700.1| PREDICTED: polyadenylate-binding protein 2-like [Bombus impatiens]
Length = 228
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 56/72 (77%), Gaps = 7/72 (9%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG-----GPRGRGRGRVSRGAA 57
A+RD VQTAMA+DES+FRGRQIKV PKRTNRPG+S TNRG G RG RG + RG+A
Sbjct: 149 AERDSVQTAMAIDESMFRGRQIKVMPKRTNRPGLSVTNRGPRGARGYRGIARG-IIRGSA 207
Query: 58 MYGGYRPVRRAR 69
Y GYRP+RR R
Sbjct: 208 -YFGYRPIRRPR 218
>gi|328725437|ref|XP_003248478.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Acyrthosiphon pisum]
Length = 329
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 55/74 (74%), Gaps = 7/74 (9%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG-GPRGRG--RGR-VSRGAA- 57
A D V TAMAMD+SLFRGRQIKVNPKRTN+PGISTTNR RGR RGR +SRG A
Sbjct: 244 ADMDSVNTAMAMDDSLFRGRQIKVNPKRTNKPGISTTNRPVASRGRAMFRGRPMSRGGAQ 303
Query: 58 --MYGGYRPVRRAR 69
YGGYRP RR R
Sbjct: 304 SSFYGGYRPSRRPR 317
>gi|332374616|gb|AEE62449.1| unknown [Dendroctonus ponderosae]
Length = 228
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/71 (74%), Positives = 55/71 (77%), Gaps = 8/71 (11%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG----RGR-VSRGAAM 58
RD VQTAMAMDESLFRGRQIKV PKRTNRPGISTTNR PRGRG RGR SRG
Sbjct: 150 DRDSVQTAMAMDESLFRGRQIKVMPKRTNRPGISTTNR-PPRGRGVSTFRGRGASRGG-- 206
Query: 59 YGGYRPVRRAR 69
+ GYRP+RR R
Sbjct: 207 FYGYRPMRRPR 217
>gi|332026434|gb|EGI66562.1| Polyadenylate-binding protein 2 [Acromyrmex echinatior]
Length = 228
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 54/72 (75%), Gaps = 7/72 (9%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG-----GPRGRGRGRVSRGAA 57
A+RD VQTAMAMDES+FRGRQIKV PKRTN+PG S TNRG G RG RG + RG+A
Sbjct: 149 AERDSVQTAMAMDESMFRGRQIKVMPKRTNKPGFSMTNRGPRGARGYRGMARG-IIRGSA 207
Query: 58 MYGGYRPVRRAR 69
Y GYRP RR R
Sbjct: 208 -YFGYRPTRRPR 218
>gi|307171015|gb|EFN63078.1| Polyadenylate-binding protein 2 [Camponotus floridanus]
Length = 228
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 55/71 (77%), Gaps = 5/71 (7%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG-RGRGRVSRG---AAM 58
A+RD VQTAMAMDES+FRGRQIKV PKRTN+PG S TNR GPRG RG ++RG ++
Sbjct: 149 AERDSVQTAMAMDESMFRGRQIKVMPKRTNKPGFSMTNR-GPRGARGYRGMTRGIIRSSA 207
Query: 59 YGGYRPVRRAR 69
Y GYRP RR R
Sbjct: 208 YFGYRPTRRPR 218
>gi|189239479|ref|XP_975440.2| PREDICTED: similar to polyadenylate binding protein 2 [Tribolium
castaneum]
Length = 222
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGA--AMYGG 61
RD VQTAMAMDESLFRGR IKV PKRTNRPG+STTNR PRGRG R +RG Y G
Sbjct: 148 DRDSVQTAMAMDESLFRGRPIKVMPKRTNRPGLSTTNR-PPRGRGAFRGARGVGRGFYAG 206
Query: 62 Y 62
Y
Sbjct: 207 Y 207
>gi|307196969|gb|EFN78344.1| Polyadenylate-binding protein 2 [Harpegnathos saltator]
Length = 228
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 48/63 (76%), Gaps = 6/63 (9%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG-----GPRGRGRGRVSRGAA 57
A+RD VQTAMAMDES+FRGRQIKV PKRTN+PG S TNRG G RG RG + RG+A
Sbjct: 149 AERDSVQTAMAMDESMFRGRQIKVMPKRTNKPGFSMTNRGPRGARGYRGMTRG-IIRGSA 207
Query: 58 MYG 60
YG
Sbjct: 208 YYG 210
>gi|47086087|ref|NP_998424.1| polyadenylate-binding protein nuclear 1 isoform 1 [Danio rerio]
gi|46250394|gb|AAH68437.1| Zgc:85979 [Danio rerio]
gi|50925993|gb|AAH79522.1| Pabpn1 protein [Danio rerio]
gi|182889100|gb|AAI64644.1| Pabpn1 protein [Danio rerio]
Length = 284
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR---GRVSRGAAMY 59
A ++ V+TAMA+DESLFRGRQIKV KRTNRPGISTT+RG PR R R G S A Y
Sbjct: 147 ADKESVRTAMALDESLFRGRQIKVGAKRTNRPGISTTDRGFPRARFRSRGGNFSSRARYY 206
Query: 60 GGYRPVR 66
GY P R
Sbjct: 207 SGYTPPR 213
>gi|324515910|gb|ADY46353.1| Polyadenylate-binding protein 2 [Ascaris suum]
Length = 217
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 48/63 (76%), Gaps = 3/63 (4%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRG--RVSRGAAMYG 60
A ++ VQTAMA+DESLFRGRQIKV PKRTNRPG+STTNR PR RGRG RV G
Sbjct: 140 ADKESVQTAMALDESLFRGRQIKVCPKRTNRPGVSTTNR-PPRARGRGGARVIVKYIYGG 198
Query: 61 GYR 63
GYR
Sbjct: 199 GYR 201
>gi|157109621|ref|XP_001650752.1| glycine rich RNA binding protein, putative [Aedes aegypti]
gi|94469160|gb|ABF18429.1| splicing factor RNPS1 [Aedes aegypti]
gi|108868426|gb|EAT32651.1| AAEL015143-PA [Aedes aegypti]
Length = 220
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 54/66 (81%), Gaps = 5/66 (7%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG--RGRG-RVSRGAAMYGG 61
++ V+TA+AM+E+LFRGRQIKVNPKRTNRPG+ TTNR PRG RGRG R+SR A YGG
Sbjct: 144 KEFVETALAMNETLFRGRQIKVNPKRTNRPGMCTTNR-FPRGSVRGRGARISR-ACCYGG 201
Query: 62 YRPVRR 67
+R RR
Sbjct: 202 HRGSRR 207
>gi|410908757|ref|XP_003967857.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Takifugu
rubripes]
Length = 284
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR---GRVSRGAAMY 59
A ++ V+TAMA+DESLFRGRQIKV KRTNRPGISTT+RG PR R R G S A Y
Sbjct: 147 ADKESVRTAMALDESLFRGRQIKVVAKRTNRPGISTTDRGFPRARFRSRGGSFSSRARYY 206
Query: 60 GGYRPVR 66
GY P R
Sbjct: 207 SGYTPPR 213
>gi|348544131|ref|XP_003459535.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Oreochromis niloticus]
Length = 284
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR---GRVSRGAAMY 59
A ++ V+TAMA+DESLFRGRQIKV KRTNRPGISTT+RG PR R R G S A Y
Sbjct: 147 ADKESVRTAMALDESLFRGRQIKVGAKRTNRPGISTTDRGFPRARFRSRGGNFSLRARYY 206
Query: 60 GGYRPVR 66
GY P R
Sbjct: 207 SGYTPPR 213
>gi|157109619|ref|XP_001650751.1| glycine rich RNA binding protein, putative [Aedes aegypti]
gi|108868425|gb|EAT32650.1| AAEL015143-PB [Aedes aegypti]
Length = 222
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 54/66 (81%), Gaps = 5/66 (7%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG--RGRG-RVSRGAAMYGG 61
++ V+TA+AM+E+LFRGRQIKVNPKRTNRPG+ TTNR PRG RGRG R+SR A YGG
Sbjct: 144 KEFVETALAMNETLFRGRQIKVNPKRTNRPGMCTTNR-FPRGSVRGRGARISR-ACCYGG 201
Query: 62 YRPVRR 67
+R RR
Sbjct: 202 HRGSRR 207
>gi|157311739|ref|NP_001098602.1| polyadenylate-binding protein nuclear 1 isoform 2 [Danio rerio]
gi|166158019|ref|NP_001107419.1| uncharacterized protein LOC100135259 [Xenopus (Silurana)
tropicalis]
gi|156914711|gb|AAI52624.1| Pabpn1 protein [Danio rerio]
gi|158253845|gb|AAI54029.1| Poly(A) binding protein, nuclear 1 [Danio rerio]
gi|163915712|gb|AAI57544.1| LOC100135259 protein [Xenopus (Silurana) tropicalis]
Length = 232
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 47/65 (72%), Gaps = 3/65 (4%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR---GRVSRGAAMY 59
A ++ V+TAMA+DESLFRGRQIKV KRTNRPGISTT+RG PR R R G S A Y
Sbjct: 147 ADKESVRTAMALDESLFRGRQIKVGAKRTNRPGISTTDRGFPRARFRSRGGNFSSRARYY 206
Query: 60 GGYRP 64
GY P
Sbjct: 207 SGYTP 211
>gi|47213059|emb|CAF93812.1| unnamed protein product [Tetraodon nigroviridis]
Length = 220
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR---GRVSRGAAMY 59
A ++ V+TAMA+DESLFRGRQIKV KRTNRPGISTT+RG PR R R G S A Y
Sbjct: 147 ADKESVRTAMALDESLFRGRQIKVVAKRTNRPGISTTDRGFPRARFRSRGGSFSSRARYY 206
Query: 60 GGYRPVR 66
GY P R
Sbjct: 207 SGYTPPR 213
>gi|410908755|ref|XP_003967856.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Takifugu
rubripes]
Length = 232
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 47/65 (72%), Gaps = 3/65 (4%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR---GRVSRGAAMY 59
A ++ V+TAMA+DESLFRGRQIKV KRTNRPGISTT+RG PR R R G S A Y
Sbjct: 147 ADKESVRTAMALDESLFRGRQIKVVAKRTNRPGISTTDRGFPRARFRSRGGSFSSRARYY 206
Query: 60 GGYRP 64
GY P
Sbjct: 207 SGYTP 211
>gi|348544129|ref|XP_003459534.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1
[Oreochromis niloticus]
Length = 232
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 47/65 (72%), Gaps = 3/65 (4%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR---GRVSRGAAMY 59
A ++ V+TAMA+DESLFRGRQIKV KRTNRPGISTT+RG PR R R G S A Y
Sbjct: 147 ADKESVRTAMALDESLFRGRQIKVGAKRTNRPGISTTDRGFPRARFRSRGGNFSLRARYY 206
Query: 60 GGYRP 64
GY P
Sbjct: 207 SGYTP 211
>gi|312373984|gb|EFR21644.1| hypothetical protein AND_16675 [Anopheles darlingi]
Length = 229
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 50/62 (80%), Gaps = 4/62 (6%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG-RGR-GRVSRGAAMYGGYRPV 65
V+TA+AM+E+LFRGRQIKVNPKRTNRPG+ TNR PRG RGR RVSR A YGG+R
Sbjct: 147 VETALAMNETLFRGRQIKVNPKRTNRPGLCQTNR-FPRGARGRAARVSR-ACCYGGHRGT 204
Query: 66 RR 67
RR
Sbjct: 205 RR 206
>gi|242004476|ref|XP_002423109.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
gi|212506055|gb|EEB10371.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
Length = 221
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGY 62
A +D VQTAMAMDESLFRGRQIKVNPKRTN+PG+ST+NR GR RGR RG +Y GY
Sbjct: 144 ADKDSVQTAMAMDESLFRGRQIKVNPKRTNKPGMSTSNRISRAGRYRGRAGRGYPLY-GY 202
Query: 63 RPVRRAR 69
R RR R
Sbjct: 203 RLPRRPR 209
>gi|327287898|ref|XP_003228665.1| PREDICTED: polyadenylate-binding protein 2-like [Anolis
carolinensis]
Length = 196
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 48/64 (75%), Gaps = 4/64 (6%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGP----RGRGRGRVSRGAAM 58
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG P RGRG G S A
Sbjct: 110 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRTRYRGRGSGYSSSRARF 169
Query: 59 YGGY 62
Y G+
Sbjct: 170 YSGF 173
>gi|170036993|ref|XP_001846345.1| polyadenylate-binding protein 2 [Culex quinquefasciatus]
gi|167879973|gb|EDS43356.1| polyadenylate-binding protein 2 [Culex quinquefasciatus]
Length = 218
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 52/65 (80%), Gaps = 4/65 (6%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG-RGRG-RVSRGAAMYGGY 62
++ V+TA+AM+E+LFRGRQIKVNPKRTNRPG+ TTNR PRG RGR RVSR A YG +
Sbjct: 144 KEFVETALAMNETLFRGRQIKVNPKRTNRPGMCTTNR-FPRGMRGRASRVSR-ACCYGAH 201
Query: 63 RPVRR 67
R RR
Sbjct: 202 RGTRR 206
>gi|345321135|ref|XP_003430388.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Ornithorhynchus anatinus]
Length = 338
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 48/64 (75%), Gaps = 4/64 (6%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAA----M 58
+ ++ V+T+MA+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R + ++
Sbjct: 253 SDKESVRTSMALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARFRARATNYSSSRARF 312
Query: 59 YGGY 62
Y G+
Sbjct: 313 YSGF 316
>gi|395503056|ref|XP_003755889.1| PREDICTED: polyadenylate-binding protein 2 [Sarcophilus harrisii]
Length = 333
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ +D V+T+MA+D+SLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 248 SDKDSVRTSMALDDSLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARAT 298
>gi|357612937|gb|EHJ68241.1| polyadenylate binding protein 2 [Danaus plexippus]
Length = 217
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR--GGPRGRGRGRVSRGAAMYGG 61
+D VQTAMAMDESLFRGRQIKV PKRTN+PG+STTNR G RGRGR + G
Sbjct: 146 DKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGLSTTNRPPRGARGRGRSYRGGFTPYFSG 205
Query: 62 YRPVRRAR 69
YRP+RR R
Sbjct: 206 YRPMRRGR 213
>gi|402590193|gb|EJW84124.1| hypothetical protein WUBG_04965 [Wuchereria bancrofti]
Length = 206
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 48/66 (72%), Gaps = 10/66 (15%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGA-----A 57
A ++ VQTA+A+DESLFRGRQIKV KRTNRPG+STTNR PR RGRG GA
Sbjct: 140 ADKEAVQTALALDESLFRGRQIKVCAKRTNRPGVSTTNR-PPRARGRG----GARVIVKY 194
Query: 58 MYGGYR 63
+Y GYR
Sbjct: 195 IYAGYR 200
>gi|431907175|gb|ELK11241.1| Polyadenylate-binding protein 2 [Pteropus alecto]
Length = 208
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 123 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 173
>gi|126277431|ref|XP_001369327.1| PREDICTED: polyadenylate-binding protein 2-like [Monodelphis
domestica]
Length = 306
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ +D V+T+MA+D+SLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 221 SDKDSVRTSMALDDSLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARAT 271
>gi|281353092|gb|EFB28676.1| hypothetical protein PANDA_022375 [Ailuropoda melanoleuca]
Length = 152
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 79 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 129
>gi|444728816|gb|ELW69258.1| Bcl-2-like protein 2 [Tupaia chinensis]
Length = 367
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 287 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 337
>gi|349603101|gb|AEP99036.1| Polyadenylate-binding protein 2-like protein, partial [Equus
caballus]
Length = 113
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 38 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 88
>gi|297297505|ref|XP_001107287.2| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Macaca
mulatta]
Length = 355
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 280 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 330
>gi|149063931|gb|EDM14201.1| poly(A) binding protein, nuclear 1, isoform CRA_c [Rattus
norvegicus]
Length = 194
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 109 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 159
>gi|315434255|ref|NP_001186793.1| BCL2L2-PABPN1 protein [Homo sapiens]
gi|332223067|ref|XP_003260692.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Nomascus
leucogenys]
gi|338717165|ref|XP_003363601.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Equus
caballus]
gi|397473278|ref|XP_003808142.1| PREDICTED: polyadenylate-binding protein 2 [Pan paniscus]
gi|403264162|ref|XP_003924360.1| PREDICTED: polyadenylate-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410961928|ref|XP_003987530.1| PREDICTED: polyadenylate-binding protein 2 isoform 3 [Felis catus]
gi|426232740|ref|XP_004010379.1| PREDICTED: polyadenylate-binding protein 2 [Ovis aries]
gi|410267786|gb|JAA21859.1| BCL2L2-PABPN1 readthrough [Pan troglodytes]
gi|417399112|gb|JAA46586.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 333
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 248 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 298
>gi|440893202|gb|ELR46056.1| Polyadenylate-binding protein 2, partial [Bos grunniens mutus]
Length = 189
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 104 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 154
>gi|354488039|ref|XP_003506178.1| PREDICTED: polyadenylate-binding protein 2-like [Cricetulus
griseus]
Length = 333
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 248 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 298
>gi|149063930|gb|EDM14200.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Rattus
norvegicus]
Length = 184
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 109 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 159
>gi|417398942|gb|JAA46504.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 323
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 248 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 298
>gi|351697106|gb|EHB00025.1| Polyadenylate-binding protein 2, partial [Heterocephalus glaber]
Length = 189
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 104 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 154
>gi|301792821|ref|XP_002931377.1| PREDICTED: polyadenylate-binding protein 2-like [Ailuropoda
melanoleuca]
Length = 178
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 93 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 143
>gi|158292594|ref|XP_313998.3| AGAP005117-PA [Anopheles gambiae str. PEST]
gi|157017065|gb|EAA09415.5| AGAP005117-PA [Anopheles gambiae str. PEST]
Length = 221
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 51/65 (78%), Gaps = 4/65 (6%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG-RGR-GRVSRGAAMYGGY 62
++ V+TA+AM+E+LFRGRQIKVNPKRTNRPG+ TNR PRG RGR RVSR A YG +
Sbjct: 144 KEFVETALAMNETLFRGRQIKVNPKRTNRPGMCQTNR-FPRGVRGRAARVSR-ACCYGAH 201
Query: 63 RPVRR 67
R RR
Sbjct: 202 RGTRR 206
>gi|291403571|ref|XP_002717950.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Oryctolagus
cuniculus]
Length = 366
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 281 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 331
>gi|194374387|dbj|BAG57089.1| unnamed protein product [Homo sapiens]
Length = 168
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 93 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 143
>gi|27807029|ref|NP_776994.1| polyadenylate-binding protein 2 [Bos taurus]
gi|46396285|sp|Q28165.3|PABP2_BOVIN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|1051125|emb|CAA62006.1| polyA binding protein II [Bos taurus]
gi|126920947|gb|AAI33559.1| Poly(A) binding protein, nuclear 1 [Bos taurus]
gi|296483592|tpg|DAA25707.1| TPA: polyadenylate-binding protein 2 [Bos taurus]
Length = 306
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 221 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 271
>gi|348577533|ref|XP_003474538.1| PREDICTED: polyadenylate-binding protein 2-like [Cavia porcellus]
Length = 306
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 221 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 271
>gi|4758876|ref|NP_004634.1| polyadenylate-binding protein 2 [Homo sapiens]
gi|343780920|ref|NP_001230477.1| polyadenylate-binding protein 2 [Sus scrofa]
gi|360039231|ref|NP_001123909.2| polyadenylate-binding protein 2 [Canis lupus familiaris]
gi|114652132|ref|XP_001162168.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pan
troglodytes]
gi|296214561|ref|XP_002753680.1| PREDICTED: polyadenylate-binding protein 2 isoform 2 [Callithrix
jacchus]
gi|395859297|ref|XP_003801976.1| PREDICTED: polyadenylate-binding protein 2 [Otolemur garnettii]
gi|402875708|ref|XP_003901638.1| PREDICTED: polyadenylate-binding protein 2 [Papio anubis]
gi|426376431|ref|XP_004055004.1| PREDICTED: polyadenylate-binding protein 2 [Gorilla gorilla
gorilla]
gi|46403176|sp|Q86U42.3|PABP2_HUMAN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2895276|gb|AAC39596.1| poly(A) binding protein II [Homo sapiens]
gi|15012075|gb|AAH10939.1| Poly(A) binding protein, nuclear 1 [Homo sapiens]
gi|119586571|gb|EAW66167.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|119586572|gb|EAW66168.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|387539310|gb|AFJ70282.1| polyadenylate-binding protein 2 [Macaca mulatta]
Length = 306
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 221 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 271
>gi|380800735|gb|AFE72243.1| polyadenylate-binding protein 2, partial [Macaca mulatta]
Length = 273
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 188 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 238
>gi|28193136|emb|CAD62310.1| unnamed protein product [Homo sapiens]
Length = 298
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 223 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 273
>gi|126717485|gb|AAI33469.1| PABPN1 protein [Bos taurus]
Length = 296
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 221 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 271
>gi|201860272|ref|NP_001128480.1| polyadenylate-binding protein 2 [Rattus norvegicus]
gi|149063929|gb|EDM14199.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Rattus
norvegicus]
Length = 302
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 217 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 267
>gi|126010727|gb|AAI33552.1| PABPN1 protein [Bos taurus]
Length = 275
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 190 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 240
>gi|112983360|ref|NP_001037644.1| polyadenylate binding protein 2 [Bombyx mori]
gi|109706831|gb|ABG43002.1| polyadenylate binding protein 2 [Bombyx mori]
Length = 218
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR--GGPRGRGRGRVSRGAAMYGGY 62
+D VQTAMAMDESLFRGRQIKV PKRTN+PG+S+TNR RGRGRG A Y G+
Sbjct: 148 KDSVQTAMAMDESLFRGRQIKVMPKRTNKPGLSSTNRPPRTMRGRGRGYRGGLAPYYTGF 207
Query: 63 RPVRRAR 69
RP RR R
Sbjct: 208 RPPRRGR 214
>gi|417409281|gb|JAA51155.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 278
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 203 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 253
>gi|9506945|ref|NP_062275.1| polyadenylate-binding protein 2 [Mus musculus]
gi|46396417|sp|Q8CCS6.3|PABP2_MOUSE RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2351846|gb|AAC00210.1| poly(A) binding protein II [Mus musculus]
gi|33585929|gb|AAH55866.1| Poly(A) binding protein, nuclear 1 [Mus musculus]
gi|148704376|gb|EDL36323.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Mus musculus]
Length = 302
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 217 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRSRYRARTT 267
>gi|291190353|ref|NP_001167243.1| Polyadenylate-binding protein 2 [Salmo salar]
gi|223648842|gb|ACN11179.1| Polyadenylate-binding protein 2 [Salmo salar]
Length = 237
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 48/67 (71%), Gaps = 6/67 (8%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR-----VSRGAA 57
+ ++ V+TAMA+DESLFRGRQIKV KRTNRPGISTT+RG PR R R R SR A
Sbjct: 151 SDKESVRTAMALDESLFRGRQIKVGVKRTNRPGISTTDRGFPRARFRSRGGNFNPSR-AR 209
Query: 58 MYGGYRP 64
Y GY P
Sbjct: 210 YYSGYTP 216
>gi|297694743|ref|XP_002824624.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pongo abelii]
Length = 296
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 221 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTT 271
>gi|148704375|gb|EDL36322.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Mus musculus]
Length = 294
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 219 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRSRYRARTT 269
>gi|26328001|dbj|BAC27741.1| unnamed protein product [Mus musculus]
Length = 292
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 217 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRSRYRARTT 267
>gi|312072775|ref|XP_003139219.1| pabpn1-prov protein [Loa loa]
gi|307765621|gb|EFO24855.1| pabpn1-prov protein [Loa loa]
Length = 214
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRG 50
A ++ VQTA+A+DESLFRGRQIKV KRTNRPG+STTNR PR RGRG
Sbjct: 140 ADKEAVQTALALDESLFRGRQIKVCAKRTNRPGVSTTNR-PPRTRGRG 186
>gi|389614949|dbj|BAM20476.1| glycine rich RNA binding protein, putative [Papilio polytes]
Length = 218
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGA---AMYGG 61
+D VQTAMAMDESLFRGRQIKV PKRTN+PG+S+TNR PR S +
Sbjct: 148 KDSVQTAMAMDESLFRGRQIKVMPKRTNKPGLSSTNR-PPRSMRGRGRSFRGGFNSYLAV 206
Query: 62 YRPVRRAR 69
YRP+RR R
Sbjct: 207 YRPIRRGR 214
>gi|164430255|gb|ABY55455.1| Pabp2 [Drosophila mauritiana]
gi|164430257|gb|ABY55456.1| Pabp2 [Drosophila mauritiana]
gi|164430259|gb|ABY55457.1| Pabp2 [Drosophila mauritiana]
gi|164430261|gb|ABY55458.1| Pabp2 [Drosophila mauritiana]
gi|164430263|gb|ABY55459.1| Pabp2 [Drosophila mauritiana]
gi|188504221|gb|ACD56226.1| PABP2 [Drosophila simulans]
gi|188504223|gb|ACD56227.1| PABP2 [Drosophila simulans]
gi|188504225|gb|ACD56228.1| PABP2 [Drosophila simulans]
gi|188504227|gb|ACD56229.1| PABP2 [Drosophila simulans]
gi|188504229|gb|ACD56230.1| PABP2 [Drosophila sechellia]
Length = 228
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 48/64 (75%), Gaps = 5/64 (7%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYGGYRP 64
V+TA+AM+E+LFRGRQIKV KRTNRPG+STTN RG RGRG RVSR A + +R
Sbjct: 154 VETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARVSR-ACCHSTFRG 211
Query: 65 VRRA 68
RRA
Sbjct: 212 ARRA 215
>gi|195332369|ref|XP_002032871.1| GM21011 [Drosophila sechellia]
gi|195581470|ref|XP_002080557.1| GD10545 [Drosophila simulans]
gi|194124841|gb|EDW46884.1| GM21011 [Drosophila sechellia]
gi|194192566|gb|EDX06142.1| GD10545 [Drosophila simulans]
Length = 229
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 48/64 (75%), Gaps = 5/64 (7%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYGGYRP 64
V+TA+AM+E+LFRGRQIKV KRTNRPG+STTN RG RGRG RVSR A + +R
Sbjct: 154 VETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARVSR-ACCHSTFRG 211
Query: 65 VRRA 68
RRA
Sbjct: 212 ARRA 215
>gi|195455316|ref|XP_002074665.1| GK23192 [Drosophila willistoni]
gi|194170750|gb|EDW85651.1| GK23192 [Drosophila willistoni]
Length = 225
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 50/67 (74%), Gaps = 5/67 (7%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYGG 61
++ V+TA+AM+E+LFRGRQIKV KRTNRPG+STTN RG RGRG RVSR A +
Sbjct: 147 KEYVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARVSR-ACCHST 204
Query: 62 YRPVRRA 68
+R RRA
Sbjct: 205 FRGARRA 211
>gi|195121132|ref|XP_002005075.1| GI19259 [Drosophila mojavensis]
gi|193910143|gb|EDW09010.1| GI19259 [Drosophila mojavensis]
Length = 224
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 50/67 (74%), Gaps = 5/67 (7%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYGG 61
++ V+TA+AM+E+LFRGRQIKV KRTNRPG+STTN RG RGRG RVSR A +
Sbjct: 147 KEYVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARVSR-ACCHST 204
Query: 62 YRPVRRA 68
+R RRA
Sbjct: 205 FRGARRA 211
>gi|17136784|ref|NP_476902.1| Pabp2, isoform A [Drosophila melanogaster]
gi|24586513|ref|NP_724648.1| Pabp2, isoform B [Drosophila melanogaster]
gi|75009760|sp|Q7KNF2.1|PABP2_DROME RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; Short=dPABP2; AltName:
Full=Nuclear poly(A)-binding protein 1; AltName:
Full=Poly(A)-binding protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1; AltName:
Full=Protein rox2
gi|6007612|gb|AAF00976.1|AF116341_1 poly(A)-binding protein II [Drosophila melanogaster]
gi|7304089|gb|AAF59127.1| Pabp2, isoform A [Drosophila melanogaster]
gi|17944423|gb|AAL48102.1| RE74211p [Drosophila melanogaster]
gi|18447531|gb|AAL68327.1| RE69521p [Drosophila melanogaster]
gi|21627704|gb|AAM68852.1| Pabp2, isoform B [Drosophila melanogaster]
gi|220949012|gb|ACL87049.1| Pabp2-PA [synthetic construct]
gi|220958188|gb|ACL91637.1| Pabp2-PA [synthetic construct]
Length = 224
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 48/64 (75%), Gaps = 5/64 (7%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYGGYRP 64
V+TA+AM+E+LFRGRQIKV KRTNRPG+STTN RG RGRG RVSR A + +R
Sbjct: 150 VETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARVSR-ACCHSTFRG 207
Query: 65 VRRA 68
RRA
Sbjct: 208 ARRA 211
>gi|606751|gb|AAA73522.1| RNA binding protein [Drosophila melanogaster]
Length = 224
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 48/64 (75%), Gaps = 5/64 (7%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYGGYRP 64
V+TA+AM+E+LFRGRQIKV KRTNRPG+STTN RG RGRG RVSR A + +R
Sbjct: 150 VETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARVSR-ACCHSTFRG 207
Query: 65 VRRA 68
RRA
Sbjct: 208 ARRA 211
>gi|195383378|ref|XP_002050403.1| GJ22134 [Drosophila virilis]
gi|194145200|gb|EDW61596.1| GJ22134 [Drosophila virilis]
Length = 224
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 50/67 (74%), Gaps = 5/67 (7%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYGG 61
++ V+TA+AM+E+LFRGRQIKV KRTNRPG+STTN RG RGRG RVSR A +
Sbjct: 147 KEYVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARVSR-ACCHST 204
Query: 62 YRPVRRA 68
+R RRA
Sbjct: 205 FRGARRA 211
>gi|194863574|ref|XP_001970507.1| GG23338 [Drosophila erecta]
gi|190662374|gb|EDV59566.1| GG23338 [Drosophila erecta]
Length = 224
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 50/67 (74%), Gaps = 5/67 (7%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYGG 61
++ V+TA+AM+E+LFRGRQIKV KRTNRPG+STTN RG RGRG RVSR A +
Sbjct: 147 KEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARVSR-ACCHST 204
Query: 62 YRPVRRA 68
+R RRA
Sbjct: 205 FRGARRA 211
>gi|195474616|ref|XP_002089587.1| Pabp2 [Drosophila yakuba]
gi|194175688|gb|EDW89299.1| Pabp2 [Drosophila yakuba]
Length = 225
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 50/67 (74%), Gaps = 5/67 (7%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYGG 61
++ V+TA+AM+E+LFRGRQIKV KRTNRPG+STTN RG RGRG RVSR A +
Sbjct: 147 KEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARVSR-ACCHST 204
Query: 62 YRPVRRA 68
+R RRA
Sbjct: 205 FRGARRA 211
>gi|194757557|ref|XP_001961031.1| GF13666 [Drosophila ananassae]
gi|190622329|gb|EDV37853.1| GF13666 [Drosophila ananassae]
Length = 224
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 50/67 (74%), Gaps = 5/67 (7%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYGG 61
++ V+TA+AM+E+LFRGRQIKV KRTNRPG+STTN RG RGRG RVSR A +
Sbjct: 147 KEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGTFRGRG-ARVSR-ACCHST 204
Query: 62 YRPVRRA 68
+R RRA
Sbjct: 205 FRGARRA 211
>gi|195029099|ref|XP_001987412.1| GH21908 [Drosophila grimshawi]
gi|193903412|gb|EDW02279.1| GH21908 [Drosophila grimshawi]
Length = 224
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 50/67 (74%), Gaps = 5/67 (7%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYGG 61
++ V+TA+AM+E+LFRGRQIKV KRTNRPG+STTN RG RGRG RVSR + +
Sbjct: 147 KEYVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARVSR-SCCHST 204
Query: 62 YRPVRRA 68
+R RRA
Sbjct: 205 FRGARRA 211
>gi|126304970|ref|XP_001376941.1| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Monodelphis domestica]
Length = 322
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGR--GRGRVSRGAAMYG 60
A D V+TA +DE+ FRGR IKV PKRTN PGISTTNRGGPR R GRG ++Y
Sbjct: 219 AHEDSVKTAAELDETTFRGRIIKVLPKRTNFPGISTTNRGGPRNRLSGRGCPPLRCSLYF 278
Query: 61 GYRPVRRAR 69
G R R R
Sbjct: 279 GDRLRPRGR 287
>gi|389609797|dbj|BAM18510.1| glycine rich RNA binding protein, putative [Papilio xuthus]
Length = 218
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 35/37 (94%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR 41
+D VQTAMAMDESLFRGRQIKV PKRTN+PG+S+TNR
Sbjct: 148 KDSVQTAMAMDESLFRGRQIKVMPKRTNKPGLSSTNR 184
>gi|289741433|gb|ADD19464.1| splicing factor RNPS1 [Glossina morsitans morsitans]
Length = 223
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 49/63 (77%), Gaps = 5/63 (7%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG--RGRG-RVSRGAAMYGGYRP 64
V+TA+AM+E+LFRGRQIKV KRTNRPG+STTNR PRG RGRG R+SR A + +R
Sbjct: 149 VETALAMNETLFRGRQIKVMSKRTNRPGLSTTNR-FPRGTFRGRGARISR-ACCHTSFRG 206
Query: 65 VRR 67
RR
Sbjct: 207 TRR 209
>gi|195153805|ref|XP_002017814.1| GL17107 [Drosophila persimilis]
gi|194113610|gb|EDW35653.1| GL17107 [Drosophila persimilis]
Length = 225
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 5/67 (7%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYGG 61
++ V+TA+AM+E+LFRGRQIKV KRTNRPG+STTN RG RGRG R SR A +
Sbjct: 147 KEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARASR-ACCHST 204
Query: 62 YRPVRRA 68
+R RRA
Sbjct: 205 FRGARRA 211
>gi|125808904|ref|XP_001360914.1| GA15278 [Drosophila pseudoobscura pseudoobscura]
gi|109892812|sp|Q28ZX3.1|PABP2_DROPS RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|54636086|gb|EAL25489.1| GA15278 [Drosophila pseudoobscura pseudoobscura]
Length = 225
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 5/67 (7%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN---RGGPRGRGRGRVSRGAAMYGG 61
++ V+TA+AM+E+LFRGRQIKV KRTNRPG+STTN RG RGRG R SR A +
Sbjct: 147 KEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNRFARGSFRGRG-ARASR-ACCHST 204
Query: 62 YRPVRRA 68
+R RRA
Sbjct: 205 FRGARRA 211
>gi|443723317|gb|ELU11799.1| hypothetical protein CAPTEDRAFT_18178 [Capitella teleta]
Length = 157
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 45/59 (76%), Gaps = 6/59 (10%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYG-GY 62
+D V+TA A+D+SLF+GRQIKV PKRTNRPGIS+TNR P GR R RG A +G GY
Sbjct: 95 KDSVETAQALDDSLFKGRQIKVTPKRTNRPGISSTNR-PPSGRFR----RGGARFGSGY 148
>gi|395508493|ref|XP_003758545.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Sarcophilus
harrisii]
Length = 384
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/64 (59%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGR--GRGRVSRGAAMYG 60
A +D V+TAM +DE+ FRGR IKV PKRTN PGISTT+RGG R R GRG ++Y
Sbjct: 218 AYKDSVKTAMDLDETTFRGRIIKVLPKRTNLPGISTTDRGGLRSRLPGRGGTPHRYSLYI 277
Query: 61 GYRP 64
G RP
Sbjct: 278 GDRP 281
>gi|345307423|ref|XP_001512125.2| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 412
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/69 (55%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGR--GRGRVSRGAAMYG 60
A V+ A+ +DES FRGR IKV PKRTN PGIS+T+RGG RG GRG +S A +G
Sbjct: 205 ASESSVKAAVDLDESTFRGRIIKVLPKRTNMPGISSTDRGGLRGHCIGRGALSHRATFHG 264
Query: 61 GYRPVRRAR 69
G R R R
Sbjct: 265 GSRSRPRGR 273
>gi|291232664|ref|XP_002736265.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Saccoglossus
kowalevskii]
Length = 231
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 35/38 (92%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
A +D VQT++A+DESLF+GRQIKV PKRTNRPGISTTN
Sbjct: 150 ADKDSVQTSLALDESLFKGRQIKVLPKRTNRPGISTTN 187
>gi|348516557|ref|XP_003445805.1| PREDICTED: polyadenylate-binding protein 2-like [Oreochromis
niloticus]
Length = 240
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 46/67 (68%), Gaps = 12/67 (17%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG---RGRGRVSRGAAMY 59
+ RD VQ+A+ + E+LFRGR +KV PKRTN PGISTT+RGG RG RGRGR
Sbjct: 109 SDRDSVQSAIGLHETLFRGRVLKVMPKRTNMPGISTTDRGGHRGAHSRGRGR-------- 160
Query: 60 GGYRPVR 66
GYRP R
Sbjct: 161 -GYRPPR 166
>gi|427796401|gb|JAA63652.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 34/37 (91%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR 41
+D +QTAMA+DESLFRGRQIKV KRTNRPGISTTNR
Sbjct: 172 KDSIQTAMALDESLFRGRQIKVMTKRTNRPGISTTNR 208
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 33/36 (91%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
+D +QTAMA+DESLFRGRQIKV KRTNRPGISTTN
Sbjct: 223 KDSIQTAMALDESLFRGRQIKVMTKRTNRPGISTTN 258
>gi|170592979|ref|XP_001901242.1| pabpn1-prov protein [Brugia malayi]
gi|158591309|gb|EDP29922.1| pabpn1-prov protein, putative [Brugia malayi]
Length = 219
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 41/53 (77%), Gaps = 6/53 (11%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIK-----VNPKRTNRPGISTTNRGGPRGRGRG 50
A ++ VQTA+A+DESLFRGRQIK V KRTNRPG+STTNR PR RGRG
Sbjct: 140 ADKEAVQTALALDESLFRGRQIKASFCSVCAKRTNRPGVSTTNR-PPRARGRG 191
>gi|327289636|ref|XP_003229530.1| PREDICTED: embryonic polyadenylate-binding protein 2-like, partial
[Anolis carolinensis]
Length = 262
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGR--GRGRVSRGAAMYG 60
A + V+ AM +DES+FR R IKV PKRTN PGISTT+RGG RGR GRG + R A G
Sbjct: 190 ADKSSVKVAMELDESVFRDRVIKVLPKRTNMPGISTTDRGGSRGRFHGRGALPRRAGFNG 249
Query: 61 GYR 63
R
Sbjct: 250 AQR 252
>gi|47575772|ref|NP_001001230.1| polyadenylate-binding protein 2 [Xenopus (Silurana) tropicalis]
gi|82237242|sp|Q6NVP7.1|PABP2_XENTR RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|45708904|gb|AAH67958.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|89268254|emb|CAJ82538.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 296
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 38/42 (90%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGP 44
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG P
Sbjct: 212 SDKESVRTSLALDESLFRGRQIKVVPKRTNRPGISTTDRGFP 253
>gi|147907300|ref|NP_001080719.1| polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82241535|sp|Q7ZXB8.1|PAB2B_XENLA RecName: Full=Polyadenylate-binding protein 2-B; Short=PABP-2-B;
Short=Poly(A)-binding protein 2-B; AltName: Full=Nuclear
poly(A)-binding protein 1-B; AltName:
Full=Poly(A)-binding protein II-B; Short=PABII-B;
AltName: Full=Polyadenylate-binding nuclear protein 1-B;
AltName: Full=XLnPABP2-B; AltName: Full=nPABP2-B;
AltName: Full=xPABPII-B
gi|27924235|gb|AAH45063.1| Pabpn1-prov protein [Xenopus laevis]
Length = 295
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 38/42 (90%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGP 44
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG P
Sbjct: 211 SDKESVRTSLALDESLFRGRQIKVVPKRTNRPGISTTDRGFP 252
>gi|148232022|ref|NP_001082057.1| polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82247012|sp|Q9DDY9.1|PAB2A_XENLA RecName: Full=Polyadenylate-binding protein 2-A; Short=PABP-2-A;
Short=Poly(A)-binding protein 2-A; AltName: Full=Nuclear
poly(A)-binding protein 1-A; AltName:
Full=Poly(A)-binding protein II-A; Short=PABII-A;
AltName: Full=Polyadenylate-binding nuclear protein 1-A;
AltName: Full=XLnPABP2-A; AltName: Full=nPABP2-A;
AltName: Full=xPABPII-A
gi|11527140|gb|AAG36902.1|AF257236_1 poly(A) binding protein II [Xenopus laevis]
gi|38641397|gb|AAR26262.1| nuclear poly(A) binding protein 2 [Xenopus laevis]
gi|49257355|gb|AAH73657.1| PABPII protein [Xenopus laevis]
Length = 296
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 37/42 (88%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGP 44
++ V+T++A+DESLFRGRQIKV PKRTNRPGISTT+RG P
Sbjct: 212 CDKESVRTSLALDESLFRGRQIKVVPKRTNRPGISTTDRGFP 253
>gi|67969697|dbj|BAE01197.1| unnamed protein product [Macaca fascicularis]
Length = 147
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 37/43 (86%)
Query: 11 AMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
++A+DESLFRG++IKV PKRTNRPGISTT+RG PR R R R +
Sbjct: 70 SLALDESLFRGKEIKVIPKRTNRPGISTTDRGFPRARYRARTT 112
>gi|349803921|gb|AEQ17433.1| putative poly binding nuclear 1 [Hymenochirus curtipes]
Length = 255
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 38/42 (90%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGP 44
++++ V+T+MA+DESLFRGRQIKV KRTN+PGISTT+RG P
Sbjct: 183 SEKESVRTSMALDESLFRGRQIKVGAKRTNKPGISTTDRGFP 224
>gi|391328788|ref|XP_003738866.1| PREDICTED: polyadenylate-binding protein 2-like [Metaseiulus
occidentalis]
Length = 193
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 33/38 (86%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
A +D V+TAMAMD+SLFRGRQIKV KRTN PGISTTN
Sbjct: 117 ADKDSVETAMAMDDSLFRGRQIKVLQKRTNMPGISTTN 154
>gi|196012776|ref|XP_002116250.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
gi|190581205|gb|EDV21283.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
Length = 139
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 14/61 (22%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR--------------GGPRGRG 48
+ ++ V+TAMA+D+SLFRGRQIKV+PKRTNRPG+S+T+R GGPR R
Sbjct: 60 SDKESVKTAMALDDSLFRGRQIKVSPKRTNRPGVSSTDRGFRRGRRPFRHGGVGGPRRRS 119
Query: 49 R 49
R
Sbjct: 120 R 120
>gi|449282485|gb|EMC89318.1| Polyadenylate-binding protein 2, partial [Columba livia]
Length = 178
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG--RGRGRVSRGAAMYGG 61
++ V+ A+ +DES+FRGR IKV PKRTN PGIS+T+RGG RG + RG +S+ Y G
Sbjct: 96 EKSSVKAAVELDESVFRGRVIKVLPKRTNMPGISSTDRGGYRGCFQARGGLSQHGGYYRG 155
Query: 62 YRPVRRAR 69
+P R R
Sbjct: 156 QQPRVRGR 163
>gi|427796791|gb|JAA63847.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 249
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/36 (83%), Positives = 33/36 (91%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
+D +QTAMA+DESLFRGRQIKV KRTNRPGISTTN
Sbjct: 172 KDSIQTAMALDESLFRGRQIKVMTKRTNRPGISTTN 207
>gi|260784963|ref|XP_002587533.1| hypothetical protein BRAFLDRAFT_237106 [Branchiostoma floridae]
gi|229272681|gb|EEN43544.1| hypothetical protein BRAFLDRAFT_237106 [Branchiostoma floridae]
Length = 100
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 34/38 (89%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
A +D ++TA A+D+SLFRGRQIKV PKRTNRPG+STT+
Sbjct: 43 ADKDSIETAKALDDSLFRGRQIKVVPKRTNRPGVSTTD 80
>gi|260797827|ref|XP_002593902.1| hypothetical protein BRAFLDRAFT_61143 [Branchiostoma floridae]
gi|229279134|gb|EEN49913.1| hypothetical protein BRAFLDRAFT_61143 [Branchiostoma floridae]
Length = 166
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 34/38 (89%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
A +D ++TA A+D+SLFRGRQIKV PKRTNRPG+STT+
Sbjct: 97 ADKDSIETAKALDDSLFRGRQIKVVPKRTNRPGVSTTD 134
>gi|321477676|gb|EFX88634.1| hypothetical protein DAPPUDRAFT_206317 [Daphnia pulex]
Length = 222
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
+D VQTAMA+DESLFRGRQIKV KRTNRPGIS++N
Sbjct: 148 KDSVQTAMALDESLFRGRQIKVMLKRTNRPGISSSN 183
>gi|405978177|gb|EKC42587.1| Polyadenylate-binding protein 2 [Crassostrea gigas]
Length = 244
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/39 (76%), Positives = 34/39 (87%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR 41
A +D V TA A+DESLFRGRQIKV+ KRTNRPGIS+TNR
Sbjct: 150 ADKDSVTTAQALDESLFRGRQIKVSAKRTNRPGISSTNR 188
>gi|118096584|ref|XP_001232211.1| PREDICTED: polyadenylate-binding protein 2 [Gallus gallus]
Length = 249
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG--RGRGRVSRGAAMYGG 61
++ V+ A+ +DES+FRGR IKV PKRTN PGIS+T+RGG RG + RG + YGG
Sbjct: 167 QKSSVKAAVELDESIFRGRVIKVLPKRTNMPGISSTDRGGRRGHFQARGGLIPRWGYYGG 226
Query: 62 YRPVR 66
+PVR
Sbjct: 227 -QPVR 230
>gi|344242620|gb|EGV98723.1| Polyadenylate-binding protein 2 [Cricetulus griseus]
Length = 244
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 27/78 (34%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVN---------------------------PKRTNRPG 35
+ ++ V+T++A+DESLFRGRQIKV+ PKRTNRPG
Sbjct: 132 SDKESVRTSLALDESLFRGRQIKVSIVPWLWVLCRFSALKPRLSVLSPLQVIPKRTNRPG 191
Query: 36 ISTTNRGGPRGRGRGRVS 53
ISTT+RG PR R R R +
Sbjct: 192 ISTTDRGFPRARYRARTT 209
>gi|341898366|gb|EGT54301.1| hypothetical protein CAEBREN_10290 [Caenorhabditis brenneri]
Length = 223
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/38 (68%), Positives = 33/38 (86%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR 41
++D +Q A+AM +SL RGRQIKV+ KRTNRPG+STTNR
Sbjct: 146 EKDGMQNALAMTDSLLRGRQIKVDQKRTNRPGLSTTNR 183
>gi|189521749|ref|XP_001923043.1| PREDICTED: polyadenylate-binding protein 2-B-like isoform 1 [Danio
rerio]
Length = 192
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 4/51 (7%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN---RGGPRGRGRG 50
+ R+ V+TAMA+DE+LFRGR IKV+PKRTN PG STT+ RGG RGRG
Sbjct: 115 SDRESVRTAMALDETLFRGRVIKVSPKRTNIPGFSTTDVYLRGG-WSRGRG 164
>gi|296474988|tpg|DAA17103.1| TPA: ePABP2-like [Bos taurus]
Length = 271
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGG 61
A Q A+ +D+S+FRGR IKV PKRTN PGIS+T+RGG RG RV G+ YGG
Sbjct: 189 ATESSAQAAVELDKSIFRGRVIKVLPKRTNLPGISSTDRGGLRGHPGARV--GSFPYGG 245
>gi|268564716|ref|XP_002639198.1| C. briggsae CBR-PABP-2 protein [Caenorhabditis briggsae]
Length = 205
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 34/38 (89%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR 41
++D +Q A+AM +SL RGRQIKV+PKRTNRPG+STTNR
Sbjct: 128 EKDGMQNALAMTDSLLRGRQIKVDPKRTNRPGLSTTNR 165
>gi|296478138|tpg|DAA20253.1| TPA: ePABP2-like [Bos taurus]
Length = 272
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGG 61
A Q A+ +D+S+FRGR IKV PKRTN PGIS+T+RGG RG RV G+ YGG
Sbjct: 190 ATESSAQAAVELDKSIFRGRVIKVLPKRTNLPGISSTDRGGLRGHPGARV--GSFPYGG 246
>gi|292616346|ref|XP_002662984.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
gi|292616348|ref|XP_002662985.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
Length = 163
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 4/51 (7%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN---RGGPRGRGRG 50
+ R+ V+TAMA+DE+LFRGR IKV+PKRTN PG STT+ RGG RGRG
Sbjct: 86 SDRESVRTAMALDETLFRGRVIKVSPKRTNIPGFSTTDVYLRGG-WSRGRG 135
>gi|417399667|gb|JAA46825.1| Putative apoptosis regulator [Desmodus rotundus]
Length = 361
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 28/79 (35%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVN----------------------------PKRTNRP 34
+ ++ V+T++A+DESLFRGRQIKV+ PKRTNRP
Sbjct: 248 SDKESVRTSLALDESLFRGRQIKVSSMLVTVLVLCKFSRLTKALLYIPHSQVIPKRTNRP 307
Query: 35 GISTTNRGGPRGRGRGRVS 53
GISTT+RG PR R R R +
Sbjct: 308 GISTTDRGFPRARYRARTT 326
>gi|297284777|ref|XP_001117810.2| PREDICTED: embryonic polyadenylate-binding protein 2-like, partial
[Macaca mulatta]
Length = 147
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGR 47
A + VQ A+ +D+SLFRGR IKV PKRTN PGIS+T+RGG RG
Sbjct: 65 ATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGH 109
>gi|417399469|gb|JAA46738.1| Putative apoptosis regulator [Desmodus rotundus]
Length = 351
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 28/79 (35%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVN----------------------------PKRTNRP 34
+ ++ V+T++A+DESLFRGRQIKV+ PKRTNRP
Sbjct: 248 SDKESVRTSLALDESLFRGRQIKVSSMLVTVLVLCKFSRLTKALLYIPHSQVIPKRTNRP 307
Query: 35 GISTTNRGGPRGRGRGRVS 53
GISTT+RG PR R R R +
Sbjct: 308 GISTTDRGFPRARYRARTT 326
>gi|417409509|gb|JAA51255.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 303
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 28/79 (35%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVN----------------------------PKRTNRP 34
+ ++ V+T++A+DESLFRGRQIKV+ PKRTNRP
Sbjct: 190 SDKESVRTSLALDESLFRGRQIKVSSMLVTVLVLCKFSRLTKALLYIPHSQVIPKRTNRP 249
Query: 35 GISTTNRGGPRGRGRGRVS 53
GISTT+RG PR R R R +
Sbjct: 250 GISTTDRGFPRARYRARTT 268
>gi|417409417|gb|JAA51214.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 293
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 28/79 (35%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVN----------------------------PKRTNRP 34
+ ++ V+T++A+DESLFRGRQIKV+ PKRTNRP
Sbjct: 190 SDKESVRTSLALDESLFRGRQIKVSSMLVTVLVLCKFSRLTKALLYIPHSQVIPKRTNRP 249
Query: 35 GISTTNRGGPRGRGRGRVS 53
GISTT+RG PR R R R +
Sbjct: 250 GISTTDRGFPRARYRARTT 268
>gi|359075107|ref|XP_002694906.2| PREDICTED: embryonic polyadenylate-binding protein 2 [Bos taurus]
Length = 319
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGG 61
A Q A+ +D+S+FRGR IKV PKRTN PGIS+T+RGG RG RV G+ YGG
Sbjct: 237 ATESSAQAAVELDKSIFRGRVIKVLPKRTNLPGISSTDRGGLRGHPGARV--GSFPYGG 293
>gi|308494172|ref|XP_003109275.1| CRE-PABP-2 protein [Caenorhabditis remanei]
gi|308246688|gb|EFO90640.1| CRE-PABP-2 protein [Caenorhabditis remanei]
Length = 205
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 34/38 (89%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR 41
++D +Q A+AM +SL RGRQIKV+PKRTNRPG+S+TNR
Sbjct: 128 EKDGMQNALAMTDSLLRGRQIKVDPKRTNRPGLSSTNR 165
>gi|256071830|ref|XP_002572241.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360043836|emb|CCD81382.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 223
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 4/60 (6%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYRP 64
RD V+ A+A+D+S FR RQ+KV PKRTN PG+S TNR P RGR +RG M G+RP
Sbjct: 146 RDAVEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNR-PPFVRGR---ARGRGMSIGFRP 201
>gi|256071828|ref|XP_002572240.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360043837|emb|CCD81383.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 214
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 4/60 (6%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYRP 64
RD V+ A+A+D+S FR RQ+KV PKRTN PG+S TNR P RGR +RG M G+RP
Sbjct: 137 RDAVEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNR-PPFVRGR---ARGRGMSIGFRP 192
>gi|341904125|gb|EGT59958.1| hypothetical protein CAEBREN_16301 [Caenorhabditis brenneri]
Length = 336
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 36/45 (80%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 48
++D +Q A+AM +SL RGRQIKV+ KR NRPG+STTNR RGRG
Sbjct: 128 EKDGMQNALAMTDSLLRGRQIKVDQKRANRPGLSTTNRPPFRGRG 172
>gi|432851905|ref|XP_004067100.1| PREDICTED: embryonic polyadenylate-binding protein 2-like [Oryzias
latipes]
Length = 259
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG---RGRGRVSRGAAMY 59
+ R Q+A+ + E++FRGR +KV PKRTN PGISTT+RGG RG RGRG R
Sbjct: 128 SDRSAAQSAVGLHETMFRGRVLKVLPKRTNMPGISTTDRGGHRGSHSRGRGSGHRPPRYQ 187
Query: 60 GGYR 63
G+R
Sbjct: 188 NGFR 191
>gi|171474005|gb|AAX31042.2| SJCHGC09749 protein [Schistosoma japonicum]
gi|226468246|emb|CAX69800.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489703|emb|CAX75002.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489705|emb|CAX75003.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489707|emb|CAX75004.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 4/60 (6%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYRP 64
RD V+ A+A+D+S FR RQ+KV PKRTN PG+S TNR P RGR R RG + G+RP
Sbjct: 137 RDAVEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNR-PPFVRGRAR-GRGVSF--GFRP 192
>gi|426383231|ref|XP_004058190.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Gorilla
gorilla gorilla]
Length = 275
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 36/49 (73%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR 51
A + VQ A+ +D+SLFRGR IKV PKRTN PGIS+T+RGG RG R
Sbjct: 193 ATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGHPGSR 241
>gi|426243462|ref|XP_004015574.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Ovis aries]
Length = 272
Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 35/50 (70%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRV 52
A Q A+ +D+S+FRGR IKV PKRTN PGIS+T+RGG RG RV
Sbjct: 190 ATESSAQAAVELDKSIFRGRVIKVLPKRTNLPGISSTDRGGLRGHPGARV 239
>gi|151555091|gb|AAI48674.1| Similar to poly(A)binding protein nuclear-like 1 [synthetic
construct]
gi|162319022|gb|AAI56596.1| Similar to poly(A)binding protein nuclear-like 1 [synthetic
construct]
gi|261860988|dbj|BAI47016.1| Embryonic polyadenylate-binding protein 2 [synthetic construct]
Length = 289
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 36/49 (73%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR 51
A + VQ A+ +D+SLFRGR IKV PKRTN PGIS+T+RGG RG R
Sbjct: 196 ATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGHPGSR 244
>gi|338723296|ref|XP_001488137.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Equus
caballus]
Length = 271
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 35/49 (71%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR 51
A QTA+ +DES+FRGR IKV PKRTN PGIS+T+RGG RG R
Sbjct: 189 ATESAAQTAVELDESIFRGRVIKVLPKRTNLPGISSTDRGGLRGHPGAR 237
>gi|440908773|gb|ELR58758.1| Embryonic polyadenylate-binding protein 2, partial [Bos grunniens
mutus]
Length = 272
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 36/73 (49%), Positives = 45/73 (61%), Gaps = 8/73 (10%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGG- 61
A Q A+ +D+S+FRGR IKV PKRTN PGIS+T+RGG RG RV G+ Y G
Sbjct: 190 ATESSAQAAVELDKSIFRGRVIKVLPKRTNLPGISSTDRGGLRGHPGARV--GSFPYSGL 247
Query: 62 -----YRPVRRAR 69
+RP R+R
Sbjct: 248 QGGARFRPRGRSR 260
>gi|402909310|ref|XP_003917365.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Papio anubis]
Length = 291
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 36/49 (73%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR 51
A + VQ A+ +D+SLFRGR IKV PKRTN PGIS+T+RGG RG R
Sbjct: 209 ATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGHPGSR 257
>gi|159794905|pdb|2JWN|A Chain A, Solution Nmr Structure Of The Protease-Resistent Domain Of
Xenopus Laevis Epabp2
gi|159794906|pdb|2JWN|B Chain B, Solution Nmr Structure Of The Protease-Resistent Domain Of
Xenopus Laevis Epabp2
Length = 124
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 33/39 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR 41
A+R+ V A+AMDE++FRGR IKV PKRTN PGIS+T+R
Sbjct: 86 AERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGISSTDR 124
>gi|17505625|ref|NP_492504.1| Protein PABP-2 [Caenorhabditis elegans]
gi|3874370|emb|CAB02750.1| Protein PABP-2 [Caenorhabditis elegans]
Length = 205
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 31/34 (91%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR 41
+Q A+AM +SL RGRQIKV+PKRTN+PG+STTNR
Sbjct: 132 MQNALAMTDSLLRGRQIKVDPKRTNKPGMSTTNR 165
>gi|403260900|ref|XP_003922888.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Saimiri
boliviensis boliviensis]
Length = 274
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 36/49 (73%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR 51
A + VQ A+ +D+SLFRGR IKV PKRTN PGIS+T+RGG RG R
Sbjct: 192 ATKGSVQAAVQLDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGHPGSR 240
>gi|341895192|gb|EGT51127.1| hypothetical protein CAEBREN_00953 [Caenorhabditis brenneri]
Length = 205
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 33/38 (86%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR 41
++D +Q A+AM +SL RGRQIKV+ KRTNRPG+STTNR
Sbjct: 128 EKDGMQNALAMTDSLLRGRQIKVDQKRTNRPGLSTTNR 165
>gi|62858583|ref|NP_001016352.1| poly(A) binding protein, nuclear 1-like (cytoplasmic) [Xenopus
(Silurana) tropicalis]
gi|89266764|emb|CAJ81799.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|111305754|gb|AAI21547.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 218
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
A+R+ V A+AMDE++FRGR IKV PKRTN PGISTT+
Sbjct: 142 AERNSVDVAVAMDETVFRGRTIKVLPKRTNMPGISTTD 179
>gi|312283705|ref|NP_001073956.2| embryonic polyadenylate-binding protein 2 [Homo sapiens]
gi|205716472|sp|A6NDY0.1|EPAB2_HUMAN RecName: Full=Embryonic polyadenylate-binding protein 2;
Short=Embryonic poly(A)-binding protein 2;
Short=ePABP-2; Short=ePABP2; AltName: Full=Embryonic
poly(A)-binding protein type II; AltName:
Full=Poly(A)-binding protein nuclear-like 1
Length = 278
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 36/49 (73%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR 51
A + VQ A+ +D+SLFRGR IKV PKRTN PGIS+T+RGG RG R
Sbjct: 196 ATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGHPGSR 244
>gi|395748220|ref|XP_003778730.1| PREDICTED: LOW QUALITY PROTEIN: embryonic polyadenylate-binding
protein 2 [Pongo abelii]
Length = 278
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 40/54 (74%), Gaps = 3/54 (5%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGA 56
A + VQ A+ +D+SLFRGR IKV PKRTN PGIS+T+RGG RG + SRGA
Sbjct: 196 ATKRSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGH---QGSRGA 246
>gi|348550266|ref|XP_003460953.1| PREDICTED: embryonic polyadenylate-binding protein 2-like [Cavia
porcellus]
Length = 273
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRV 52
A + Q A+ +DES+FRGR +KV PKRTN PGIS+T+RGG RG RV
Sbjct: 191 ATQRSAQAAVELDESIFRGRALKVLPKRTNFPGISSTDRGGLRGHLGTRV 240
>gi|226470148|emb|CAX70355.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 4/60 (6%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYRP 64
RD + A+A+D+S FR RQ+KV PKRTN PG+S TNR P RGR R RG + G+RP
Sbjct: 137 RDAFEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNR-PPFVRGRAR-GRGVSF--GFRP 192
>gi|397468279|ref|XP_003805819.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Pan paniscus]
Length = 278
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 36/49 (73%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR 51
A + VQ A+ +D+SLFRGR IKV PKRTN PGIS+T+RGG RG R
Sbjct: 196 ATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGHPGSR 244
>gi|332846661|ref|XP_003315290.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Pan
troglodytes]
Length = 266
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 36/49 (73%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR 51
A + VQ A+ +D+SLFRGR IKV PKRTN PGIS+T+RGG RG R
Sbjct: 196 ATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGHPGSR 244
>gi|164651984|gb|ABY64767.1| ePABP2 [Homo sapiens]
Length = 278
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 36/49 (73%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR 51
A + VQ A+ +D+SLFRGR IKV PKRTN PGIS+T+RGG RG R
Sbjct: 196 ATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGHPGSR 244
>gi|339245105|ref|XP_003378478.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316972604|gb|EFV56277.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 561
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR 49
A ++ Q ++AM ++LFRGRQIKV KRTNRPG+ T P GR R
Sbjct: 136 ADKESAQASLAMTDTLFRGRQIKVLEKRTNRPGMGNTRARRPYGRAR 182
>gi|226482504|emb|CAX73851.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 4/60 (6%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYRP 64
RD V+ A+A+D+S FR RQ+KV PKR N PG+S TNR P RGR R RG + G+RP
Sbjct: 137 RDAVEAAIALDDSSFRSRQLKVLPKRINVPGMSMTNR-PPFVRGRAR-GRGVSF--GFRP 192
>gi|358009812|pdb|3UCG|A Chain A, Crystal Structure Of A Rna Binding Domain Of
Hypothetical Polyadenylate-Binding Protein (Pabpn1)
From Homo Sapiens At 1.95 A Resolution
Length = 89
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 31/34 (91%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGI
Sbjct: 56 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 89
>gi|165761289|pdb|3B4D|A Chain A, Crystal Structure Of Human Pabpn1 Rrm
gi|165761291|pdb|3B4M|A Chain A, Crystal Structure Of Human Pabpn1 Rrm
gi|165761292|pdb|3B4M|B Chain B, Crystal Structure Of Human Pabpn1 Rrm
gi|165761293|pdb|3B4M|C Chain C, Crystal Structure Of Human Pabpn1 Rrm
gi|165761294|pdb|3B4M|D Chain D, Crystal Structure Of Human Pabpn1 Rrm
Length = 96
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 31/34 (91%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
+ ++ V+T++A+DESLFRGRQIKV PKRTNRPGI
Sbjct: 55 SDKESVRTSLALDESLFRGRQIKVIPKRTNRPGI 88
>gi|166157542|ref|NP_001107251.1| embryonic polyadenylate-binding protein 2 [Rattus norvegicus]
gi|205716473|sp|B0BNE4.1|EPAB2_RAT RecName: Full=Embryonic polyadenylate-binding protein 2;
Short=Embryonic poly(A)-binding protein 2;
Short=ePABP-2; Short=ePABP2; AltName: Full=Embryonic
poly(A)-binding protein type II; AltName:
Full=Poly(A)-binding protein nuclear-like 1
gi|165970991|gb|AAI58790.1| Pabpnl1 protein [Rattus norvegicus]
Length = 269
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 35/51 (68%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
A + VQ A+ +DES FRGR IKV PKRTN PGIS+T+RGG R R +
Sbjct: 188 ASKSSVQAAVRLDESTFRGRVIKVLPKRTNFPGISSTDRGGLRTHSSSRAA 238
>gi|410984123|ref|XP_003998381.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Felis catus]
Length = 277
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 36/49 (73%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR 51
A Q A+A+D+S+FRGR IKV PKRTN PGIS+T+RGG RGR R
Sbjct: 195 AAESSAQAAVALDKSIFRGRVIKVLPKRTNLPGISSTDRGGFRGRPGAR 243
>gi|351712927|gb|EHB15846.1| Embryonic polyadenylate-binding protein 2 [Heterocephalus glaber]
Length = 308
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 9 QTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG 46
Q A+ +DES+FRGR IKV PKRTN PGIS+T+RGG +G
Sbjct: 235 QAAVELDESIFRGRVIKVLPKRTNFPGISSTDRGGLQG 272
>gi|354465338|ref|XP_003495137.1| PREDICTED: embryonic polyadenylate-binding protein 2-like isoform 2
[Cricetulus griseus]
Length = 281
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPR 45
A ++ VQ A+ +DES FRGR IKV PKRTN PGIS+T+RGG R
Sbjct: 199 ASQNSVQAAVELDESTFRGRVIKVLPKRTNFPGISSTDRGGLR 241
>gi|390362827|ref|XP_799120.2| PREDICTED: polyadenylate-binding protein 2-like [Strongylocentrotus
purpuratus]
Length = 249
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR 41
++D + TA ++ SLF+GRQI+VN KRTNRPGISTT+R
Sbjct: 152 EKDSIDTACTLNLSLFKGRQIRVNAKRTNRPGISTTDR 189
>gi|149038404|gb|EDL92764.1| similar to embryonic pol(yA) binding protein 2 (predicted) [Rattus
norvegicus]
Length = 284
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 35/51 (68%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
A + VQ A+ +DES FRGR IKV PKRTN PGIS+T+RGG R R +
Sbjct: 203 ASKSSVQAAVRLDESTFRGRVIKVLPKRTNFPGISSTDRGGLRTHSSSRAA 253
>gi|395856895|ref|XP_003800852.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Otolemur
garnettii]
Length = 274
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPR 45
A + Q A+ +D+S+FRGR IKV PKRTN PGIS+T+RGG R
Sbjct: 192 ATKSSAQAAVELDDSVFRGRVIKVLPKRTNFPGISSTDRGGLR 234
>gi|213623852|gb|AAI70311.1| LOC403372 protein [Xenopus laevis]
Length = 218
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
A+R+ V A+AMDE++FRGR IKV PKRTN PGIS+T+
Sbjct: 142 AERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGISSTD 179
>gi|213626875|gb|AAI70309.1| Embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
A+R+ V A+AMDE++FRGR IKV PKRTN PGIS+T+
Sbjct: 142 AERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGISSTD 179
>gi|147899481|ref|NP_001084418.1| embryonic polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82238228|sp|Q6TY21.1|EPA2B_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-B;
Short=Embryonic poly(A)-binding protein 2-B;
Short=XePABP2-B; Short=ePABP-2B; Short=ePABP2-B;
AltName: Full=Embryonic poly(A)-binding protein type
II-B
gi|38641399|gb|AAR26263.1| embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
A+R+ V A+AMDE++FRGR IKV PKRTN PGIS+T+
Sbjct: 142 AERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGISSTD 179
>gi|354465336|ref|XP_003495136.1| PREDICTED: embryonic polyadenylate-binding protein 2-like isoform 1
[Cricetulus griseus]
Length = 275
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPR 45
A ++ VQ A+ +DES FRGR IKV PKRTN PGIS+T+RGG R
Sbjct: 193 ASQNSVQAAVELDESTFRGRVIKVLPKRTNFPGISSTDRGGLR 235
>gi|344292774|ref|XP_003418100.1| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Loxodonta africana]
Length = 280
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 32/57 (56%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMY 59
A VQ A+ +DES+FR R IKV PKRTN PGIS+T+RGG RG +RG A Y
Sbjct: 198 AATTSVQAAVKLDESVFRDRVIKVCPKRTNFPGISSTDRGGLRGHPS---ARGGAFY 251
>gi|291575265|gb|ADE10198.1| ePABP2 [Cynoglossus semilaevis]
Length = 260
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
+ RD VQ+A+ + E+LFRGR +KV PKRTN PGISTT+
Sbjct: 129 SDRDSVQSAIGLHETLFRGRVLKVLPKRTNMPGISTTD 166
>gi|358340157|dbj|GAA28424.2| polyadenylate-binding protein 2 [Clonorchis sinensis]
Length = 288
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/37 (67%), Positives = 29/37 (78%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR 41
RD V+ AMA+DES FR R +KV PKRTN PG+S TNR
Sbjct: 137 RDAVEAAMALDESNFRNRALKVLPKRTNVPGMSMTNR 173
>gi|340372421|ref|XP_003384742.1| PREDICTED: polyadenylate-binding protein 2-like [Amphimedon
queenslandica]
Length = 273
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
D V+ A+ +DESLFRGRQIKV KRTNRPG++ TN
Sbjct: 189 DSVKMALDLDESLFRGRQIKVTAKRTNRPGLAVTN 223
>gi|148227694|ref|NP_001082505.1| embryonic polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82241899|sp|Q804A5.1|EPA2A_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-A;
Short=Embryonic poly(A)-binding protein 2-A;
Short=XePABP2-A; Short=ePABP-2A; Short=ePABP2-A;
AltName: Full=Embryonic poly(A)-binding protein type
II-A; AltName: Full=PABPN2; AltName: Full=p32
gi|28273596|gb|AAO33927.1| putative polyA-binding protein PABPN2/ePABP2 [Xenopus laevis]
Length = 218
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
A+R+ V A+ MDE++FRGR IKV PKRTN PGIS+T+
Sbjct: 142 AERNSVDAAVTMDETVFRGRTIKVLPKRTNMPGISSTD 179
>gi|148679749|gb|EDL11696.1| poly(A)binding protein nuclear-like 1 [Mus musculus]
Length = 288
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/67 (49%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGY 62
A V+ A+ +DES FRGR IKV PKRTN PGIS+T+RGG R SR A ++G
Sbjct: 207 ASHRSVKAAVGLDESTFRGRVIKVLPKRTNFPGISSTDRGGLRTHSG---SRAAFLHGSL 263
Query: 63 RPVRRAR 69
R R
Sbjct: 264 HRKARLR 270
>gi|55925591|ref|NP_001007463.1| embryonic polyadenylate-binding protein 2 [Mus musculus]
gi|81910338|sp|Q5XFR0.1|EPAB2_MOUSE RecName: Full=Embryonic polyadenylate-binding protein 2;
Short=Embryonic poly(A)-binding protein 2;
Short=ePABP-2; Short=ePABP2; AltName: Full=Embryonic
poly(A)-binding protein type II; AltName:
Full=Poly(A)-binding protein nuclear-like 1
gi|54111431|tpg|DAA02003.1| TPA_exp: embryonic poly(A) binding protein 2 [Mus musculus]
gi|223461244|gb|AAI41318.1| Poly(A)binding protein nuclear-like 1 [Mus musculus]
gi|223461425|gb|AAI41317.1| Poly(A)binding protein nuclear-like 1 [Mus musculus]
Length = 273
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 34/51 (66%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
A V+ A+ +DES FRGR IKV PKRTN PGIS+T+RGG R R +
Sbjct: 192 ASHRSVKAAVGLDESTFRGRVIKVLPKRTNFPGISSTDRGGLRTHSGNRAA 242
>gi|335289034|ref|XP_003126854.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Sus
scrofa]
Length = 285
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGR--GRGR 51
A Q A+ +D S+FRGR IKV PKRTN PGIS+T+RGG RG RGR
Sbjct: 201 ATESSAQAAVELDNSVFRGRVIKVLPKRTNFPGISSTDRGGLRGHPSARGR 251
>gi|219519920|gb|AAI45635.1| Pabpnl1 protein [Mus musculus]
Length = 288
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 34/51 (66%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
A V+ A+ +DES FRGR IKV PKRTN PGIS+T+RGG R R +
Sbjct: 207 ASHRSVKAAVGLDESTFRGRVIKVLPKRTNFPGISSTDRGGLRTHSGNRAA 257
>gi|198438310|ref|XP_002131910.1| PREDICTED: similar to Polyadenylate-binding protein 2
(Poly(A)-binding protein 2) (Poly(A)-binding protein II)
(PABII) (Polyadenylate-binding nuclear protein 1)
(Nuclear poly(A)-binding protein 1) [Ciona intestinalis]
Length = 225
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 44/58 (75%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYG 60
A + V+TA A+D +LFRGRQ++VNPKRTN+ GIS+++RG PR RGRGR A YG
Sbjct: 150 ADTESVETATALDGTLFRGRQLQVNPKRTNKHGISSSDRGRPRYRGRGRGRHYAPYYG 207
>gi|410912492|ref|XP_003969723.1| PREDICTED: polyadenylate-binding protein 2-like [Takifugu rubripes]
Length = 262
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
+ RD V +A+ + E+LFRGR +KV PKRTN PGISTT+
Sbjct: 131 SDRDSVNSAIGLHETLFRGRVLKVLPKRTNLPGISTTD 168
>gi|313214618|emb|CBY40937.1| unnamed protein product [Oikopleura dioica]
gi|313226203|emb|CBY21346.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 31/37 (83%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
+++ V A+A+D S+FR RQIKV PKRTN+PG+S+T+
Sbjct: 138 EKESVDAAIALDGSMFRDRQIKVMPKRTNKPGVSSTD 174
>gi|449679958|ref|XP_002163300.2| PREDICTED: polyadenylate-binding protein 2-like [Hydra
magnipapillata]
Length = 224
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
+D V+ A+ + +SLF+GRQIKV KRTN PGISTTN
Sbjct: 142 KDSVENAVQLSDSLFKGRQIKVTAKRTNVPGISTTN 177
>gi|156399361|ref|XP_001638470.1| predicted protein [Nematostella vectensis]
gi|156225591|gb|EDO46407.1| predicted protein [Nematostella vectensis]
Length = 173
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
+ +D V A+ + +SLF+GRQIKV KRTNRPG+S+T+
Sbjct: 89 SDKDSVDNAVLLSDSLFKGRQIKVVLKRTNRPGVSSTD 126
>gi|345800807|ref|XP_851081.2| PREDICTED: LOW QUALITY PROTEIN: embryonic polyadenylate-binding
protein 2 [Canis lupus familiaris]
Length = 310
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKV-NPKRTNRPGISTTNRGGPRGR--GRGRVSRGAAMY 59
A + Q A+ +D+S+FRGR IKV +RTN PGIS+T RGG RG+ RG+ +++
Sbjct: 227 AAKSSAQAAVELDQSIFRGRVIKVCAAQRTNLPGISSTYRGGLRGQPHARGQPLPLSSLQ 286
Query: 60 GGYR 63
GG R
Sbjct: 287 GGAR 290
>gi|313247139|emb|CBY35961.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 30/37 (81%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
+++ V ++A+D S+ GRQIKV PKRTNRPG+S+T+
Sbjct: 140 EKESVDASLALDGSILCGRQIKVMPKRTNRPGVSSTD 176
>gi|313235350|emb|CBY19695.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 30/37 (81%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
+++ V ++A+D S+ GRQIKV PKRTNRPG+S+T+
Sbjct: 140 EKESVDASLALDGSILCGRQIKVMPKRTNRPGVSSTD 176
>gi|350585423|ref|XP_003356120.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Sus
scrofa]
Length = 285
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGR--GRGR 51
A Q + +D S+FRG IKV PKRTN PGIS+T+RGG RG RGR
Sbjct: 201 ATESSAQAPVELDNSVFRGPVIKVLPKRTNFPGISSTDRGGLRGHPSARGR 251
>gi|339253200|ref|XP_003371823.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316967866|gb|EFV52232.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 208
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 5/51 (9%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVS 53
A ++ + ++AM ++LFRGRQIKV KRTNRPG+ G R R RGRV+
Sbjct: 113 ADKESARASLAMTDTLFRGRQIKVVEKRTNRPGM-----GFNRRRMRGRVA 158
>gi|167517171|ref|XP_001742926.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778025|gb|EDQ91640.1| predicted protein [Monosiga brevicollis MX1]
Length = 95
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
A+ + V AMA+DES+F GRQIKV KRTN PG++
Sbjct: 60 AEPNAVPLAMALDESMFHGRQIKVKSKRTNLPGLA 94
>gi|395330550|gb|EJF62933.1| RNA-binding domain-containing protein, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 168
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
A+ + + A+AMD SLFRGR IKV PKRTN PG +
Sbjct: 102 AEPEFIDAALAMDNSLFRGRLIKVTPKRTNIPGFN 136
>gi|393246337|gb|EJD53846.1| RNA-binding domain-containing protein, partial [Auricularia
delicata TFB-10046 SS5]
Length = 170
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
VQ AM ++ESLFRGR IKV PKRTN PG +
Sbjct: 103 VQHAMVLNESLFRGRLIKVVPKRTNVPGFN 132
>gi|298706878|emb|CBJ25842.1| similar to Polyadenylate-binding protein 2 (Poly(A)-binding protein
2) (Poly(A)-binding protein II) (PABII)
(Polyadenylate-binding nuclear protein 1) (Nuclear
poly(A)-binding protein 1) [Ectocarpus siliculosus]
Length = 265
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
A +D + A+A+D S F+GR +KV PKRTN PG+S
Sbjct: 172 ADKDGSENALALDNSPFKGRNLKVTPKRTNVPGLS 206
>gi|452822710|gb|EME29727.1| RNA-binding protein [Galdieria sulphuraria]
Length = 198
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 11 AMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
A+ ++ESLFRGR +KV+ KRTN PGISTT+
Sbjct: 129 AVILNESLFRGRNLKVSIKRTNVPGISTTD 158
>gi|392592926|gb|EIW82252.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 197
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 25/35 (71%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
A+ D + A+AMD SLFRGR IKV KRTN PG +
Sbjct: 132 AEPDFIDAALAMDNSLFRGRLIKVTAKRTNIPGFN 166
>gi|320168622|gb|EFW45521.1| RNP domain-containing protein [Capsaspora owczarzaki ATCC 30864]
Length = 224
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 28/35 (80%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
A +D V AM++++++FRGRQ+KV PKRTN P ++
Sbjct: 143 ADKDAVNNAMSLNDTVFRGRQLKVTPKRTNVPFMN 177
>gi|331215415|ref|XP_003320388.1| apoptosis regulator BCL-W [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309299378|gb|EFP75969.1| apoptosis regulator BCL-W [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 195
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A +++SLFRGRQIKV PKRTN PG+S
Sbjct: 135 VPQACLLNDSLFRGRQIKVTPKRTNVPGLS 164
>gi|71013016|ref|XP_758548.1| hypothetical protein UM02401.1 [Ustilago maydis 521]
gi|46098206|gb|EAK83439.1| hypothetical protein UM02401.1 [Ustilago maydis 521]
Length = 204
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V AM ++ESLFRGR IKV KRTN PG+S
Sbjct: 149 VANAMVLNESLFRGRLIKVTAKRTNMPGLS 178
>gi|440636403|gb|ELR06322.1| hypothetical protein GMDG_07913 [Geomyces destructans 20631-21]
Length = 209
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ESLFRGR +KV+PKRTN PG++
Sbjct: 121 VAQALVLNESLFRGRNLKVDPKRTNIPGMT 150
>gi|328860711|gb|EGG09816.1| hypothetical protein MELLADRAFT_29239 [Melampsora larici-populina
98AG31]
Length = 150
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 22/29 (75%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
V A +++SLFRGRQIKV PKRTN PG
Sbjct: 107 VHQACQLNDSLFRGRQIKVTPKRTNLPGF 135
>gi|348679138|gb|EGZ18955.1| hypothetical protein PHYSODRAFT_409429 [Phytophthora sojae]
Length = 167
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGG 43
A RD V++A+ +++++FRGRQ+KV PKR N G + T RGG
Sbjct: 127 ASRDAVESALLLNDTMFRGRQLKVTPKRQNVRGFNMT-RGG 166
>gi|164662126|ref|XP_001732185.1| hypothetical protein MGL_0778 [Malassezia globosa CBS 7966]
gi|159106087|gb|EDP44971.1| hypothetical protein MGL_0778 [Malassezia globosa CBS 7966]
Length = 215
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIST 38
V+ A ++ESLFRGR +KV PKRTN PGI+T
Sbjct: 147 VENAAVLNESLFRGRLLKVTPKRTNVPGITT 177
>gi|389635639|ref|XP_003715472.1| polyadenylate-binding protein 2 [Magnaporthe oryzae 70-15]
gi|351647805|gb|EHA55665.1| polyadenylate-binding protein 2 [Magnaporthe oryzae 70-15]
Length = 193
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+F+GR IKV+PKRTN PG+S
Sbjct: 127 VAQALVLNESVFKGRNIKVSPKRTNYPGMS 156
>gi|326469996|gb|EGD94005.1| hypothetical protein TESG_01534 [Trichophyton tonsurans CBS 112818]
Length = 186
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ESLFRGR IKV PKRTN PG++
Sbjct: 121 VAQALVLNESLFRGRNIKVVPKRTNLPGMT 150
>gi|303320527|ref|XP_003070263.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109949|gb|EER28118.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320041356|gb|EFW23289.1| hypothetical protein CPSG_01188 [Coccidioides posadasii str.
Silveira]
Length = 196
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ESLFRGR +KV PKRTN PG+S
Sbjct: 120 VAQALVLNESLFRGRNLKVVPKRTNLPGMS 149
>gi|119184697|ref|XP_001243223.1| hypothetical protein CIMG_07119 [Coccidioides immitis RS]
gi|392866108|gb|EAS28718.2| polyadenylate-binding protein 2 [Coccidioides immitis RS]
Length = 196
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ESLFRGR +KV PKRTN PG+S
Sbjct: 120 VAQALVLNESLFRGRNLKVVPKRTNLPGMS 149
>gi|428671247|gb|EKX72165.1| conserved hypothetical protein [Babesia equi]
Length = 146
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGR 51
+ D V A+ ++ESLF+ R IKV PKR N PG+ R P GR RGR
Sbjct: 87 SSEDAVNNAVMLNESLFKERIIKVTPKRKNIPGLG---RKRPTGRSRGR 132
>gi|403416120|emb|CCM02820.1| predicted protein [Fibroporia radiculosa]
Length = 255
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
+ + V A+AMD SLFRGR IKV KRTN PG +
Sbjct: 132 EAEHVDAALAMDNSLFRGRLIKVTAKRTNIPGFN 165
>gi|58263254|ref|XP_569037.1| poly(A) binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107872|ref|XP_777318.1| hypothetical protein CNBB1200 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260008|gb|EAL22671.1| hypothetical protein CNBB1200 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223687|gb|AAW41730.1| poly(A) binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 210
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
VQ A+ ++ES+FRGR ++V KRTN PG++ TN
Sbjct: 147 VQNALVLNESMFRGRMLQVKEKRTNVPGMNMTN 179
>gi|171677925|ref|XP_001903913.1| hypothetical protein [Podospora anserina S mat+]
gi|170937031|emb|CAP61689.1| unnamed protein product [Podospora anserina S mat+]
Length = 209
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ +++SLF+GR IKV PKRTN PG+S
Sbjct: 126 VAQALVLNDSLFKGRNIKVEPKRTNLPGMS 155
>gi|321248626|ref|XP_003191185.1| poly(A) binding protein [Cryptococcus gattii WM276]
gi|317457652|gb|ADV19398.1| Poly(A) binding protein, putative [Cryptococcus gattii WM276]
Length = 217
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
VQ A+ ++ES+FRGR ++V KRTN PG++ TN
Sbjct: 154 VQNALVLNESMFRGRMLQVKEKRTNVPGMNMTN 186
>gi|358378925|gb|EHK16606.1| hypothetical protein TRIVIDRAFT_19040, partial [Trichoderma virens
Gv29-8]
Length = 171
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+F+GR IKV PKRTN PG+S
Sbjct: 98 VAQALVLNESVFKGRNIKVTPKRTNIPGMS 127
>gi|358391874|gb|EHK41278.1| hypothetical protein TRIATDRAFT_169914, partial [Trichoderma
atroviride IMI 206040]
Length = 167
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+F+GR IKV PKRTN PG+S
Sbjct: 98 VAQALVLNESVFKGRNIKVTPKRTNIPGMS 127
>gi|340520405|gb|EGR50641.1| predicted protein [Trichoderma reesei QM6a]
Length = 168
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+F+GR IKV PKRTN PG+S
Sbjct: 98 VAQALVLNESVFKGRNIKVTPKRTNIPGMS 127
>gi|224287039|gb|ACN41220.1| unknown [Picea sitchensis]
Length = 201
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 11/59 (18%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYRPVR 66
VQ A+ ++ES GRQ+KV KRTN PG+ + RGR R +A Y GYRP R
Sbjct: 128 VQNAILLNESELHGRQLKVTAKRTNVPGMK-------QFRGR----RFSAPYMGYRPWR 175
>gi|70995100|ref|XP_752316.1| RNP domain protein [Aspergillus fumigatus Af293]
gi|66849951|gb|EAL90278.1| RNP domain protein [Aspergillus fumigatus Af293]
gi|159131072|gb|EDP56185.1| RNP domain protein [Aspergillus fumigatus A1163]
Length = 215
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIST 38
V A+ ++ES+FRGR +KV PKRTN PG+S+
Sbjct: 146 VAQALVLNESVFRGRNLKVVPKRTNLPGMSS 176
>gi|407928590|gb|EKG21444.1| hypothetical protein MPH_01242 [Macrophomina phaseolina MS6]
Length = 221
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+FRGR IKV PKRTN PG+S
Sbjct: 145 VAQALVLNESVFRGRNIKVVPKRTNLPGMS 174
>gi|342887594|gb|EGU87076.1| hypothetical protein FOXB_02470 [Fusarium oxysporum Fo5176]
Length = 205
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+F+GR IKV PKRTN PG+S
Sbjct: 136 VAQALVLNESVFKGRNIKVTPKRTNVPGMS 165
>gi|322694379|gb|EFY86210.1| putative rrm-type rna binding protein [Metarhizium acridum CQMa
102]
Length = 196
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+F+GR IKV PKRTN PG+S
Sbjct: 127 VAQALILNESVFKGRNIKVTPKRTNVPGMS 156
>gi|302912552|ref|XP_003050726.1| hypothetical protein NECHADRAFT_40692 [Nectria haematococca mpVI
77-13-4]
gi|256731664|gb|EEU45013.1| hypothetical protein NECHADRAFT_40692 [Nectria haematococca mpVI
77-13-4]
Length = 167
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+F+GR IKV PKRTN PG+S
Sbjct: 97 VAQALVLNESVFKGRNIKVTPKRTNIPGMS 126
>gi|116780872|gb|ABK21856.1| unknown [Picea sitchensis]
Length = 215
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 11/59 (18%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYRPVR 66
VQ A+ ++ES GRQ+KV KRTN PG+ + RGR R +A Y GYRP R
Sbjct: 142 VQNAILLNESELHGRQLKVTAKRTNVPGMK-------QFRGR----RFSAPYMGYRPWR 189
>gi|322711381|gb|EFZ02954.1| putative rrm-type rna binding protein [Metarhizium anisopliae ARSEF
23]
Length = 196
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+F+GR IKV PKRTN PG+S
Sbjct: 127 VAQALILNESVFKGRNIKVTPKRTNVPGMS 156
>gi|119496085|ref|XP_001264816.1| RNP domain protein [Neosartorya fischeri NRRL 181]
gi|119412978|gb|EAW22919.1| RNP domain protein [Neosartorya fischeri NRRL 181]
Length = 190
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIST 38
V A+ ++ES+FRGR +KV PKRTN PG+S+
Sbjct: 121 VAQALVLNESVFRGRNLKVVPKRTNLPGMSS 151
>gi|67521766|ref|XP_658944.1| hypothetical protein AN1340.2 [Aspergillus nidulans FGSC A4]
gi|40746367|gb|EAA65523.1| hypothetical protein AN1340.2 [Aspergillus nidulans FGSC A4]
gi|259488327|tpe|CBF87685.1| TPA: RNP domain protein (AFU_orthologue; AFUA_1G09490) [Aspergillus
nidulans FGSC A4]
Length = 187
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIST 38
V A+ ++ES+FRGR +KV PKRTN PG+S+
Sbjct: 122 VAQALVLNESVFRGRNLKVVPKRTNLPGMSS 152
>gi|224093736|ref|XP_002309968.1| predicted protein [Populus trichocarpa]
gi|222852871|gb|EEE90418.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 24/29 (82%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+A++ES GRQ+KV+PKRTN PG+
Sbjct: 143 VQEALALNESELHGRQLKVSPKRTNVPGM 171
>gi|238006378|gb|ACR34224.1| unknown [Zea mays]
gi|413952637|gb|AFW85286.1| polyadenylate-binding protein 2 [Zea mays]
Length = 199
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 5/41 (12%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 48
VQ A+ ++ES GRQ+KV PKRTN PG+ PRGRG
Sbjct: 132 VQEAIKLNESELHGRQLKVAPKRTNVPGMKQ-----PRGRG 167
>gi|224081120|ref|XP_002306300.1| predicted protein [Populus trichocarpa]
gi|222855749|gb|EEE93296.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 24/29 (82%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+A++ES GRQ+KV+PKRTN PG+
Sbjct: 143 VQEALALNESELHGRQLKVSPKRTNVPGM 171
>gi|402085387|gb|EJT80285.1| polyadenylate-binding protein 2 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 200
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+F+GR IKV PKRTN PG+S
Sbjct: 129 VAQALVLNESVFKGRNIKVVPKRTNYPGMS 158
>gi|392568671|gb|EIW61845.1| polyadenylate-binding protein 2 [Trametes versicolor FP-101664 SS1]
Length = 192
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
++ + V A++MD SLFRGR IKV KRTN PG +
Sbjct: 126 SETEHVDAALSMDNSLFRGRLIKVTAKRTNIPGFN 160
>gi|226509296|ref|NP_001152340.1| polyadenylate-binding protein 2 [Zea mays]
gi|195655291|gb|ACG47113.1| polyadenylate-binding protein 2 [Zea mays]
Length = 203
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 5/41 (12%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 48
VQ A+ ++ES GRQ+KV PKRTN PG+ PRGRG
Sbjct: 134 VQEAIKLNESELHGRQLKVAPKRTNVPGMKQ-----PRGRG 169
>gi|194706900|gb|ACF87534.1| unknown [Zea mays]
gi|195622774|gb|ACG33217.1| polyadenylate-binding protein 2 [Zea mays]
Length = 203
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 5/41 (12%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 48
VQ A+ ++ES GRQ+KV PKRTN PG+ PRGRG
Sbjct: 134 VQEAIKLNESELHGRQLKVAPKRTNVPGMKQ-----PRGRG 169
>gi|405118694|gb|AFR93468.1| poly(A) binding protein [Cryptococcus neoformans var. grubii H99]
Length = 201
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTN 40
VQ A+ ++ES+F+GR ++V KRTN PG++ TN
Sbjct: 138 VQNALVLNESMFKGRMLQVKEKRTNVPGMNMTN 170
>gi|452984683|gb|EME84440.1| hypothetical protein MYCFIDRAFT_122613, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 185
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+FRGR IKV PKRTN PG++
Sbjct: 123 VTQALVLNESVFRGRNIKVVPKRTNLPGMT 152
>gi|409050235|gb|EKM59712.1| hypothetical protein PHACADRAFT_250387 [Phanerochaete carnosa
HHB-10118-sp]
Length = 203
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
A+ + + TA+AMD SLFRGR IKV KRTN G +
Sbjct: 131 AEPESIDTALAMDNSLFRGRLIKVTSKRTNIHGFN 165
>gi|326512910|dbj|BAK03362.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 131
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
+++ VQ A+ ++ES GRQIKV+PKRTN PG+
Sbjct: 54 EQEAVQEALNLNESELHGRQIKVSPKRTNVPGM 86
>gi|440461571|gb|ELQ32355.1| polyadenylate-binding protein 2 [Magnaporthe oryzae Y34]
gi|440489256|gb|ELQ68921.1| polyadenylate-binding protein 2 [Magnaporthe oryzae P131]
Length = 213
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+F+GR IKV+PKRTN PG+S
Sbjct: 147 VAQALVLNESVFKGRNIKVSPKRTNYPGMS 176
>gi|258568696|ref|XP_002585092.1| polyadenylate-binding protein 2 [Uncinocarpus reesii 1704]
gi|237906538|gb|EEP80939.1| polyadenylate-binding protein 2 [Uncinocarpus reesii 1704]
Length = 194
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+FRGR +KV PKRTN PG+S
Sbjct: 120 VAQALVLNESVFRGRNLKVVPKRTNLPGMS 149
>gi|242092470|ref|XP_002436725.1| hypothetical protein SORBIDRAFT_10g007620 [Sorghum bicolor]
gi|241914948|gb|EER88092.1| hypothetical protein SORBIDRAFT_10g007620 [Sorghum bicolor]
Length = 203
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 5/41 (12%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 48
VQ A+ ++ES GRQ+KV PKRTN PG+ PRGRG
Sbjct: 134 VQEAVKLNESELHGRQLKVAPKRTNVPGMKQ-----PRGRG 169
>gi|145239151|ref|XP_001392222.1| polyadenylate-binding protein 2 [Aspergillus niger CBS 513.88]
gi|134076726|emb|CAK39785.1| unnamed protein product [Aspergillus niger]
Length = 189
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+FRGR +KV PKRTN PG+S
Sbjct: 121 VAQALVLNESVFRGRNLKVVPKRTNLPGMS 150
>gi|358370907|dbj|GAA87517.1| RNP domain protein [Aspergillus kawachii IFO 4308]
Length = 190
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+FRGR +KV PKRTN PG+S
Sbjct: 121 VAQALVLNESVFRGRNLKVVPKRTNLPGMS 150
>gi|350629412|gb|EHA17785.1| hypothetical protein ASPNIDRAFT_55885 [Aspergillus niger ATCC 1015]
Length = 192
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+FRGR +KV PKRTN PG+S
Sbjct: 124 VAQALVLNESVFRGRNLKVVPKRTNLPGMS 153
>gi|169763928|ref|XP_001727864.1| polyadenylate-binding protein 2 [Aspergillus oryzae RIB40]
gi|83770892|dbj|BAE61025.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871171|gb|EIT80336.1| splicing factor RNPS1, SR protein superfamily [Aspergillus oryzae
3.042]
Length = 187
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+FRGR +KV PKRTN PG+S
Sbjct: 121 VAQALVLNESVFRGRNLKVVPKRTNLPGMS 150
>gi|343172515|gb|AEL98961.1| polyadenylate-binding protein, partial [Silene latifolia]
Length = 213
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 11/62 (17%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGY 62
+++ VQ A+ ++ES GRQ+KV+PKRTN PG+ + RGR RG Y +
Sbjct: 134 VEQEAVQQALLLNESELHGRQLKVSPKRTNVPGLK-------QFRGR----RGFNPYMPF 182
Query: 63 RP 64
RP
Sbjct: 183 RP 184
>gi|238605300|ref|XP_002396414.1| hypothetical protein MPER_03357 [Moniliophthora perniciosa FA553]
gi|215468958|gb|EEB97344.1| hypothetical protein MPER_03357 [Moniliophthora perniciosa FA553]
Length = 216
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNP---KRTNRPGIS 37
A+ + V TA+ MD SLF GR IKV P KRTN PG +
Sbjct: 141 AEPEHVDTALTMDNSLFHGRLIKVQPVTAKRTNVPGFN 178
>gi|413936733|gb|AFW71284.1| hypothetical protein ZEAMMB73_459562 [Zea mays]
Length = 228
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 15/59 (25%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYRP 64
+ VQ A+ ++ES GRQ+KV PKRTN PG+ PRGRG + YRP
Sbjct: 174 EAVQEAIKLNESELHGRQLKVAPKRTNVPGMKQ-----PRGRG----------FNPYRP 217
>gi|310800127|gb|EFQ35020.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 203
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+F+GR IKV PKRTN PG+S
Sbjct: 133 VAQALVLNESVFKGRNIKVVPKRTNVPGMS 162
>gi|388852116|emb|CCF54292.1| related to poly(a) binding protein II [Ustilago hordei]
Length = 205
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V AM ++ESLFRGR IK+ KRTN PG++
Sbjct: 150 VANAMVLNESLFRGRLIKITAKRTNMPGMA 179
>gi|334187575|ref|NP_001190273.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332004147|gb|AED91530.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 128
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG 42
+ VQ A+ ++ES GRQ+KV+PKRTN PG+ + G
Sbjct: 51 EAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPG 87
>gi|320586503|gb|EFW99173.1| rnp domain containing protein [Grosmannia clavigera kw1407]
Length = 194
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+F+GR IKV PKRTN PG+S
Sbjct: 122 VAQALVLNESVFKGRNIKVVPKRTNIPGMS 151
>gi|380491263|emb|CCF35443.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 203
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+F+GR IKV PKRTN PG+S
Sbjct: 133 VAQALVLNESVFKGRNIKVVPKRTNVPGMS 162
>gi|357138034|ref|XP_003570603.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 216
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
+++ VQ A+ ++ES GRQIKV+PKRTN PG+
Sbjct: 139 EQEAVQEALNLNESELHGRQIKVSPKRTNVPGM 171
>gi|326505260|dbj|BAK03017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
+++ VQ A+ ++ES GRQIKV+PKRTN PG+
Sbjct: 133 EQEAVQEALNLNESELHGRQIKVSPKRTNVPGM 165
>gi|325186974|emb|CCA21518.1| polyadenylatebinding protein 2 putative [Albugo laibachii Nc14]
Length = 235
Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTT 39
A +D V++A+ +++++FRGRQ+KV PKR N G + T
Sbjct: 160 ASKDAVESALLLNDTMFRGRQLKVTPKRQNVRGFNYT 196
>gi|336466383|gb|EGO54548.1| hypothetical protein NEUTE1DRAFT_69316 [Neurospora tetrasperma FGSC
2508]
Length = 229
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+F+GR IKV PKRTN PG+S
Sbjct: 154 VAQALVLNESVFKGRNIKVVPKRTNIPGMS 183
>gi|164426633|ref|XP_957585.2| polyadenylate-binding protein 2 [Neurospora crassa OR74A]
gi|157071415|gb|EAA28349.2| polyadenylate-binding protein 2 [Neurospora crassa OR74A]
Length = 229
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+F+GR IKV PKRTN PG+S
Sbjct: 154 VAQALVLNESVFKGRNIKVVPKRTNIPGMS 183
>gi|408396974|gb|EKJ76125.1| hypothetical protein FPSE_03600 [Fusarium pseudograminearum CS3096]
Length = 207
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
V A+ ++ES+F+GR IKV PKRTN PG+
Sbjct: 137 VAQALVLNESMFKGRSIKVTPKRTNVPGM 165
>gi|357138032|ref|XP_003570602.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 210
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
+++ VQ A+ ++ES GRQIKV+PKRTN PG+
Sbjct: 133 EQEAVQEALNLNESELHGRQIKVSPKRTNVPGM 165
>gi|242767348|ref|XP_002341352.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
gi|218724548|gb|EED23965.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
Length = 188
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+FRGR +KV PKRTN PG++
Sbjct: 121 VAQALVLNESVFRGRNLKVTPKRTNVPGMA 150
>gi|330846765|ref|XP_003295173.1| hypothetical protein DICPUDRAFT_24800 [Dictyostelium purpureum]
gi|325074172|gb|EGC28303.1| hypothetical protein DICPUDRAFT_24800 [Dictyostelium purpureum]
Length = 145
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRP 34
++ + AMA+++S+F RQIK+ PKRTN P
Sbjct: 59 KESINNAMALNDSIFNDRQIKITPKRTNLP 88
>gi|212528088|ref|XP_002144201.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
gi|210073599|gb|EEA27686.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
Length = 190
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+FRGR +KV PKRTN PG++
Sbjct: 121 VAQALVLNESVFRGRNLKVTPKRTNVPGMA 150
>gi|343427618|emb|CBQ71145.1| related to poly(a) binding protein II [Sporisorium reilianum SRZ2]
Length = 208
Score = 42.0 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V AM ++ESLFRGR IKV KRTN PG++
Sbjct: 152 VANAMVLNESLFRGRLIKVTAKRTNMPGMA 181
>gi|367041013|ref|XP_003650887.1| hypothetical protein THITE_2110808 [Thielavia terrestris NRRL 8126]
gi|346998148|gb|AEO64551.1| hypothetical protein THITE_2110808 [Thielavia terrestris NRRL 8126]
Length = 193
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ +++S+F+GR IKV PKRTN PG+S
Sbjct: 122 VAQALVLNDSVFKGRNIKVEPKRTNIPGMS 151
>gi|367030447|ref|XP_003664507.1| hypothetical protein MYCTH_2307416 [Myceliophthora thermophila ATCC
42464]
gi|347011777|gb|AEO59262.1| hypothetical protein MYCTH_2307416 [Myceliophthora thermophila ATCC
42464]
Length = 186
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ +++S+F+GR IKV PKRTN PG+S
Sbjct: 115 VAQALVLNDSVFKGRNIKVEPKRTNIPGMS 144
>gi|15238140|ref|NP_196597.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7671468|emb|CAB89408.1| RNA binding protein-like [Arabidopsis thaliana]
gi|28393013|gb|AAO41941.1| putative polyadenylate-binding protein II (PAB2) [Arabidopsis
thaliana]
gi|28827384|gb|AAO50536.1| putative polyadenylate-binding protein II (PAB2) [Arabidopsis
thaliana]
gi|332004146|gb|AED91529.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 217
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG 42
VQ A+ ++ES GRQ+KV+PKRTN PG+ + G
Sbjct: 142 VQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPG 176
>gi|297811137|ref|XP_002873452.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319289|gb|EFH49711.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 202
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG 42
VQ A+ ++ES GRQ+KV+PKRTN PG+ + G
Sbjct: 142 VQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPG 176
>gi|30683122|ref|NP_850803.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332004145|gb|AED91528.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 202
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRG 42
VQ A+ ++ES GRQ+KV+PKRTN PG+ + G
Sbjct: 142 VQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPG 176
>gi|240281788|gb|EER45291.1| RNP domain-containing protein [Ajellomyces capsulatus H143]
Length = 188
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+FRGR +KV PKRTN PG++
Sbjct: 120 VAQALVLNESVFRGRNLKVVPKRTNLPGMT 149
>gi|261205936|ref|XP_002627705.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239592764|gb|EEQ75345.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239611077|gb|EEQ88064.1| RNP domain-containing protein [Ajellomyces dermatitidis ER-3]
gi|327350679|gb|EGE79536.1| RNP domain-containing protein [Ajellomyces dermatitidis ATCC 18188]
Length = 189
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+FRGR +KV PKRTN PG++
Sbjct: 120 VAQALVLNESVFRGRNLKVVPKRTNLPGMT 149
>gi|218197814|gb|EEC80241.1| hypothetical protein OsI_22184 [Oryza sativa Indica Group]
Length = 230
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSR--GAAMYGGY 62
VQ A+ ++ES GRQIKV PKRTN PG+ RGG RG G R GA Y Y
Sbjct: 161 VQEAVKLNESELHGRQIKVAPKRTNVPGMKQP-RGG-RGFGGHPYMRPYGAPFYNPY 215
>gi|115467128|ref|NP_001057163.1| Os06g0219600 [Oryza sativa Japonica Group]
gi|51535367|dbj|BAD37238.1| putative poly(A) binding protein II [Oryza sativa Japonica Group]
gi|113595203|dbj|BAF19077.1| Os06g0219600 [Oryza sativa Japonica Group]
gi|215704439|dbj|BAG93873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765746|dbj|BAG87443.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635211|gb|EEE65343.1| hypothetical protein OsJ_20615 [Oryza sativa Japonica Group]
Length = 204
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSR--GAAMYGGY 62
VQ A+ ++ES GRQIKV PKRTN PG+ RGG RG G R GA Y Y
Sbjct: 135 VQEAVKLNESELHGRQIKVAPKRTNVPGMKQP-RGG-RGFGGHPYMRPYGAPFYNPY 189
>gi|430811633|emb|CCJ30944.1| unnamed protein product [Pneumocystis jirovecii]
Length = 176
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
V A+ ++ESLFRGR +KV PKRTN PG+
Sbjct: 117 VPQALVLNESLFRGRLLKVVPKRTNLPGM 145
>gi|121702091|ref|XP_001269310.1| RNP domain protein [Aspergillus clavatus NRRL 1]
gi|119397453|gb|EAW07884.1| RNP domain protein [Aspergillus clavatus NRRL 1]
Length = 188
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+FRGR +KV PKRTN PG++
Sbjct: 121 VAQALVLNESVFRGRNLKVVPKRTNLPGMT 150
>gi|413924475|gb|AFW64407.1| hypothetical protein ZEAMMB73_935050 [Zea mays]
Length = 171
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 12/59 (20%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGY 62
+++ VQ A+ ++ES GRQIKV PKRTN PG+ + R RG Y GY
Sbjct: 94 EQEAVQEALNLNESELHGRQIKVAPKRTNVPGM------------KQRPPRGYNPYHGY 140
>gi|295668084|ref|XP_002794591.1| hypothetical protein PAAG_03136 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|225679740|gb|EEH18024.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
gi|226286007|gb|EEH41573.1| hypothetical protein PAAG_03136 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 188
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+FRGR +KV PKRTN PG++
Sbjct: 120 VAQALVLNESVFRGRNLKVVPKRTNLPGMA 149
>gi|195637520|gb|ACG38228.1| polyadenylate-binding protein 2 [Zea mays]
Length = 194
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 12/59 (20%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGY 62
+++ VQ A+ ++ES GRQIKV PKRTN PG+ + R RG Y GY
Sbjct: 117 EQEAVQEALNLNESELHGRQIKVAPKRTNVPGM------------KQRPPRGYNPYHGY 163
>gi|413924471|gb|AFW64403.1| polyadenylate-binding protein 2 [Zea mays]
Length = 194
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 12/59 (20%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGY 62
+++ VQ A+ ++ES GRQIKV PKRTN PG+ + R RG Y GY
Sbjct: 117 EQEAVQEALNLNESELHGRQIKVAPKRTNVPGM------------KQRPPRGYNPYHGY 163
>gi|393215597|gb|EJD01088.1| polyadenylate-binding protein 2 [Fomitiporia mediterranea MF3/22]
Length = 201
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 22/27 (81%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRP 34
V+TA ++ESLF+GR IKV PKRTN P
Sbjct: 137 VETAQTLNESLFKGRLIKVVPKRTNIP 163
>gi|226529568|ref|NP_001148500.1| polyadenylate-binding protein 2 [Zea mays]
gi|195619834|gb|ACG31747.1| polyadenylate-binding protein 2 [Zea mays]
gi|413924473|gb|AFW64405.1| polyadenylate-binding protein 2 [Zea mays]
Length = 212
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 12/59 (20%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGY 62
+++ VQ A+ ++ES GRQIKV PKRTN PG+ + R RG Y GY
Sbjct: 135 EQEAVQEALNLNESELHGRQIKVAPKRTNVPGM------------KQRPPRGYNPYHGY 181
>gi|296425243|ref|XP_002842152.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638411|emb|CAZ86343.1| unnamed protein product [Tuber melanosporum]
Length = 190
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+FRGR +KV PKRTN PG++
Sbjct: 119 VAQALVLNESVFRGRSLKVVPKRTNLPGMN 148
>gi|115448789|ref|NP_001048174.1| Os02g0757900 [Oryza sativa Japonica Group]
gi|46805689|dbj|BAD17090.1| putative poly(A) binding protein [Oryza sativa Japonica Group]
gi|113537705|dbj|BAF10088.1| Os02g0757900 [Oryza sativa Japonica Group]
gi|215692407|dbj|BAG87827.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623708|gb|EEE57840.1| hypothetical protein OsJ_08453 [Oryza sativa Japonica Group]
Length = 212
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
+++ VQ A+ ++ES GRQIKV PKRTN PG+
Sbjct: 135 EQEAVQEALNLNESELHGRQIKVAPKRTNVPGM 167
>gi|11359595|pir||T49743 probable rrm-type rna binding protein [imported] - Neurospora
crassa
gi|40882336|emb|CAF06158.1| probable RRM-type RNA binding protein [Neurospora crassa]
Length = 215
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+F+GR IKV PKRTN PG+S
Sbjct: 140 VAQALVLNESVFKGRNIKVVPKRTNIPGMS 169
>gi|350286752|gb|EGZ67999.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 215
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+F+GR IKV PKRTN PG+S
Sbjct: 140 VAQALVLNESVFKGRNIKVVPKRTNIPGMS 169
>gi|46805690|dbj|BAD17091.1| putative poly(A) binding protein [Oryza sativa Japonica Group]
gi|125541200|gb|EAY87595.1| hypothetical protein OsI_09006 [Oryza sativa Indica Group]
gi|215678683|dbj|BAG92338.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
+++ VQ A+ ++ES GRQIKV PKRTN PG+
Sbjct: 139 EQEAVQEALNLNESELHGRQIKVAPKRTNVPGM 171
>gi|226291492|gb|EEH46920.1| hypothetical protein PADG_03018 [Paracoccidioides brasiliensis
Pb18]
Length = 264
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+FRGR +KV PKRTN PG++
Sbjct: 196 VAQALVLNESVFRGRNLKVVPKRTNLPGMA 225
>gi|156082802|ref|XP_001608885.1| RNA binding protein [Babesia bovis T2Bo]
gi|154796135|gb|EDO05317.1| RNA binding protein, putative [Babesia bovis]
Length = 163
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRG 50
A D V A+ +++ LF+ R IKV PKR N PG + RGRGRG
Sbjct: 91 ASEDAVNNAVMLNDCLFKERIIKVIPKRKNIPGYNRKRAQPSRGRGRG 138
>gi|449550073|gb|EMD41038.1| hypothetical protein CERSUDRAFT_62981 [Ceriporiopsis subvermispora
B]
Length = 195
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 22/32 (68%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRP 34
A+ + V A AMD SLFRGR IKV KRTN P
Sbjct: 131 AEPEHVDAATAMDNSLFRGRLIKVTAKRTNVP 162
>gi|357124786|ref|XP_003564078.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 209
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 11/55 (20%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGY 62
+Q A+ + ES GRQIKV PKRTN PG+ PRG RG YGG+
Sbjct: 135 IQEAVKLSESELHGRQIKVAPKRTNVPGLKQ-----PRG------GRGYNPYGGH 178
>gi|351698678|gb|EHB01597.1| Polyadenylate-binding protein 2 [Heterocephalus glaber]
Length = 118
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 24/27 (88%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPK 29
+ ++ V+T++A+DESLFRGRQIKV PK
Sbjct: 92 SDKESVRTSLALDESLFRGRQIKVIPK 118
>gi|429860717|gb|ELA35441.1| rnp domain protein [Colletotrichum gloeosporioides Nara gc5]
Length = 218
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+F+GR IKV PKRTN PG+S
Sbjct: 145 VAQALVLNESIFKGRNIKVVPKRTNVPGMS 174
>gi|425774334|gb|EKV12642.1| hypothetical protein PDIG_42430 [Penicillium digitatum PHI26]
gi|425777024|gb|EKV15220.1| hypothetical protein PDIP_41010 [Penicillium digitatum Pd1]
Length = 191
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
V A+ ++ES+FRGR +KV PKRTN PG+
Sbjct: 125 VAQALVLNESVFRGRNLKVVPKRTNLPGM 153
>gi|448101244|ref|XP_004199515.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
gi|359380937|emb|CCE81396.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
Length = 213
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 6 DEVQTAMA-MDESLFRGRQIKVNPKRTNRPGISTTN 40
D V A+A +D S FR R+IKV+ KRTN PG+S+TN
Sbjct: 141 DAVNKAIATLDGSTFRDREIKVSSKRTNVPGLSSTN 176
>gi|255939756|ref|XP_002560647.1| Pc16g02770 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585270|emb|CAP92947.1| Pc16g02770 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 191
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
V A+ ++ES+FRGR +KV PKRTN PG+
Sbjct: 125 VAQALVLNESVFRGRNLKVVPKRTNLPGM 153
>gi|147827572|emb|CAN77560.1| hypothetical protein VITISV_031100 [Vitis vinifera]
Length = 175
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTT--NRGGPRG-RGRGRVSRGAAMYGGY 62
D VQ A+ ++ES GRQ+KV+ KRTN PG+ R P G RGR G + Y Y
Sbjct: 99 DAVQNALLLNESELHGRQLKVSAKRTNIPGMKQYRGRRPNPFGFRGRRPFMPGPSFYPPY 158
>gi|219120225|ref|XP_002180856.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407572|gb|EEC47508.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 97
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V+ A+ +DES F+GRQ+K+ KR N+PG++
Sbjct: 57 VENALKLDESEFKGRQLKITHKRVNQPGMA 86
>gi|217074200|gb|ACJ85460.1| unknown [Medicago truncatula]
gi|388522377|gb|AFK49250.1| unknown [Medicago truncatula]
Length = 217
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR--GGPRGR 47
D VQ A+ ++E+ GRQ+KV+ KRTN PG+ R G RGR
Sbjct: 145 DAVQNALILNETELHGRQLKVSAKRTNVPGLKQYGRRPAGFRGR 188
>gi|212722530|ref|NP_001132591.1| uncharacterized protein LOC100194063 [Zea mays]
gi|194694844|gb|ACF81506.1| unknown [Zea mays]
gi|195635091|gb|ACG37014.1| polyadenylate-binding protein 2 [Zea mays]
gi|413938966|gb|AFW73517.1| polyadenylate-binding protein 2 [Zea mays]
Length = 212
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+ ++ES GRQIKV PKRTN PG+
Sbjct: 139 VQEALNLNESELHGRQIKVAPKRTNVPGM 167
>gi|46137511|ref|XP_390447.1| hypothetical protein FG10271.1 [Gibberella zeae PH-1]
Length = 208
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
V A+ ++ES+F+GR IKV PKRTN PG+
Sbjct: 138 VAQALVLNESMFKGRSIKVTPKRTNVPGM 166
>gi|301097894|ref|XP_002898041.1| polyadenylate-binding protein 2 [Phytophthora infestans T30-4]
gi|262106486|gb|EEY64538.1| polyadenylate-binding protein 2 [Phytophthora infestans T30-4]
Length = 225
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTT 39
A D V++A+ +++++FRGRQ+KV PKR N G + +
Sbjct: 153 ASHDAVESALLLNDTMFRGRQLKVTPKRQNVRGFNMS 189
>gi|308479093|ref|XP_003101756.1| hypothetical protein CRE_12048 [Caenorhabditis remanei]
gi|308262666|gb|EFP06619.1| hypothetical protein CRE_12048 [Caenorhabditis remanei]
Length = 172
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
V++A+ M+ S FRGRQI V KRTN+PG+
Sbjct: 96 VESAIVMNSSTFRGRQIVVTAKRTNKPGM 124
>gi|308459095|ref|XP_003091873.1| hypothetical protein CRE_30215 [Caenorhabditis remanei]
gi|308254853|gb|EFO98805.1| hypothetical protein CRE_30215 [Caenorhabditis remanei]
Length = 182
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
V+ A M+ S+FRGRQI V KRTN+PG+
Sbjct: 107 VENATVMNASIFRGRQIVVTAKRTNKPGL 135
>gi|345561633|gb|EGX44721.1| hypothetical protein AOL_s00188g59 [Arthrobotrys oligospora ATCC
24927]
Length = 204
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
V A+ ++ES+FRGR +KV PKRTN PG+
Sbjct: 121 VAQALVLNESIFRGRALKVVPKRTNIPGM 149
>gi|452842735|gb|EME44671.1| hypothetical protein DOTSEDRAFT_72205 [Dothistroma septosporum
NZE10]
Length = 238
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ ++ES+FR R IKV PKRTN PG++
Sbjct: 145 VTQALVLNESVFRSRNIKVVPKRTNLPGMN 174
>gi|225454892|ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-like [Vitis vinifera]
Length = 226
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTT--NRGGPRG-RGRGRVSRGAAMYGGY 62
D VQ A+ ++ES GRQ+KV+ KRTN PG+ R P G RGR G + Y Y
Sbjct: 150 DAVQNALLLNESELHGRQLKVSAKRTNIPGMKQYRGRRPNPFGFRGRRPFMPGPSFYPPY 209
>gi|449458283|ref|XP_004146877.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+ ++ES GRQ+KV PKRTN PG+
Sbjct: 139 VQEALVLNESELHGRQLKVLPKRTNVPGM 167
>gi|294882178|ref|XP_002769641.1| glycine-rich RNA-binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239873203|gb|EER02359.1| glycine-rich RNA-binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 88
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
VQ A+ +++++FRGRQ+KV KRTN PG +
Sbjct: 17 VQNALLLNDTMFRGRQLKVLQKRTNLPGYN 46
>gi|449513137|ref|XP_004164242.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+ ++ES GRQ+KV PKRTN PG+
Sbjct: 139 VQEALVLNESELHGRQLKVLPKRTNVPGM 167
>gi|388491050|gb|AFK33591.1| unknown [Medicago truncatula]
Length = 179
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR--GGPRGR 47
D VQ A+ ++E+ GRQ+KV+ KRTN PG+ R G RGR
Sbjct: 121 DAVQNALILNETELHGRQLKVSAKRTNVPGLKQYGRRPAGFRGR 164
>gi|294924689|ref|XP_002778856.1| Embryonic polyadenylate-binding protein 2-B, putative [Perkinsus
marinus ATCC 50983]
gi|239887665|gb|EER10651.1| Embryonic polyadenylate-binding protein 2-B, putative [Perkinsus
marinus ATCC 50983]
Length = 94
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
VQ A+ +++++FRGRQ+KV KRTN PG +
Sbjct: 23 VQNALLLNDTMFRGRQLKVLQKRTNLPGYN 52
>gi|351723063|ref|NP_001235474.1| uncharacterized protein LOC100527139 [Glycine max]
gi|255631638|gb|ACU16186.1| unknown [Glycine max]
Length = 214
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
A+ D VQ A+ ++ES GRQ+KV+ KRTN PG+
Sbjct: 138 AEIDAVQNALLLNESELHGRQLKVSAKRTNVPGM 171
>gi|294878913|ref|XP_002768513.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239871063|gb|EER01231.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 196
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 23/28 (82%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPG 35
VQ A+ +++++FRGRQ+KV KRTN PG
Sbjct: 153 VQNALLLNDTMFRGRQLKVLQKRTNLPG 180
>gi|358056102|dbj|GAA97956.1| hypothetical protein E5Q_04636 [Mixia osmundae IAM 14324]
Length = 203
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A++M+E+LFRGR I V KRTN PG+S
Sbjct: 134 VANAISMNETLFRGRMILVKAKRTNVPGMS 163
>gi|328873645|gb|EGG22012.1| polyadenylate-binding protein 2 [Dictyostelium fasciculatum]
Length = 243
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRP 34
+R+ V A+ ++E++F+ RQIKV PKRTN P
Sbjct: 149 EREAVTNALMLNETMFKDRQIKVTPKRTNLP 179
>gi|384244690|gb|EIE18189.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 210
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
+ D V A+ +D S RGR++KV PKRTN PG+
Sbjct: 128 ETDAVANALLLDSSELRGRELKVLPKRTNVPGL 160
>gi|169604234|ref|XP_001795538.1| hypothetical protein SNOG_05129 [Phaeosphaeria nodorum SN15]
gi|111066400|gb|EAT87520.1| hypothetical protein SNOG_05129 [Phaeosphaeria nodorum SN15]
Length = 214
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ +D S+FR R +KV PKRTN PG++
Sbjct: 123 VNEALVLDNSVFRSRNLKVVPKRTNLPGMT 152
>gi|336260077|ref|XP_003344835.1| hypothetical protein SMAC_06118 [Sordaria macrospora k-hell]
gi|380089032|emb|CCC12976.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 213
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
V A+ ++ES+F+GR IKV PKRTN PG+
Sbjct: 136 VAQALVLNESVFKGRNIKVVPKRTNIPGM 164
>gi|226532872|ref|NP_001149957.1| polyadenylate-binding protein 2 [Zea mays]
gi|195635741|gb|ACG37339.1| polyadenylate-binding protein 2 [Zea mays]
Length = 199
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 48
VQ A+ ++ES GRQ+KV PKRTN PG+ RGRG
Sbjct: 132 VQEAIKLNESELHGRQLKVAPKRTNIPGMKQL-----RGRG 167
>gi|356525457|ref|XP_003531341.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 220
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+ ++ES GRQ+KV PKRTN PG+
Sbjct: 146 VQEALLLNESELHGRQLKVLPKRTNVPGM 174
>gi|224134274|ref|XP_002321779.1| predicted protein [Populus trichocarpa]
gi|222868775|gb|EEF05906.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTT--NRGGPRGRGRGRVSRGAAMYGGY 62
D VQ A+ ++ES GRQ+KV+ KRTN PG+ R P G R A Y Y
Sbjct: 148 DAVQNAVLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSPYGFRSQRAFMPAPFYPAY 206
>gi|342320561|gb|EGU12501.1| Polyadenylate-binding protein 2 [Rhodotorula glutinis ATCC 204091]
Length = 238
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRP 34
VQ A+ ++ES+ RGRQIKV+ KRTN P
Sbjct: 168 VQNALHLNESVLRGRQIKVSEKRTNLP 194
>gi|255637596|gb|ACU19123.1| unknown [Glycine max]
Length = 205
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+ ++ES GRQ+KV PKRTN PG+
Sbjct: 140 VQEALLLNESELHGRQLKVLPKRTNVPGM 168
>gi|255539947|ref|XP_002511038.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550153|gb|EEF51640.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 234
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
D VQ A+ ++ES GRQ+KV+ KRTN PG+
Sbjct: 172 DAVQNALLLNESELHGRQLKVSAKRTNIPGM 202
>gi|294926226|ref|XP_002779060.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239887927|gb|EER10855.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 242
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 23/28 (82%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPG 35
VQ A+ +++++FRGRQ+KV KRTN PG
Sbjct: 170 VQNALLLNDTMFRGRQLKVLQKRTNLPG 197
>gi|443713406|gb|ELU06276.1| hypothetical protein CAPTEDRAFT_174932 [Capitella teleta]
Length = 184
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/22 (72%), Positives = 20/22 (90%)
Query: 5 RDEVQTAMAMDESLFRGRQIKV 26
+D VQTA A+D+SLF+GRQIKV
Sbjct: 162 KDSVQTAQALDDSLFKGRQIKV 183
>gi|356512681|ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 215
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+ ++ES GRQ+KV PKRTN PG+
Sbjct: 140 VQEALLLNESELHGRQLKVLPKRTNVPGM 168
>gi|351725805|ref|NP_001237617.1| uncharacterized protein LOC100527545 [Glycine max]
gi|255632582|gb|ACU16641.1| unknown [Glycine max]
Length = 214
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
D VQ A+ ++ES GRQ+KV+ KRTN PG+
Sbjct: 141 DAVQNALLLNESELHGRQLKVSAKRTNVPGM 171
>gi|119720774|gb|ABL97957.1| poly(A)-binding protein II-like [Brassica rapa]
Length = 220
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
+Q A+ ++ES GRQ+KV PKRTN PG+
Sbjct: 145 IQEALQLNESELHGRQLKVLPKRTNVPGL 173
>gi|255633822|gb|ACU17272.1| unknown [Glycine max]
Length = 183
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
D VQ A+ ++ES GRQ+KV+ KRTN PG+
Sbjct: 141 DAVQNALLLNESELHGRQLKVSAKRTNVPGM 171
>gi|154310272|ref|XP_001554468.1| hypothetical protein BC1G_07056 [Botryotinia fuckeliana B05.10]
gi|347836575|emb|CCD51147.1| hypothetical protein [Botryotinia fuckeliana]
Length = 194
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
V A+ ++ES+F+GR +KV PKRTN PG+
Sbjct: 120 VAQALVLNESVFKGRNLKVVPKRTNVPGM 148
>gi|159476716|ref|XP_001696457.1| poly(A) binding protein [Chlamydomonas reinhardtii]
gi|158282682|gb|EDP08434.1| poly(A) binding protein [Chlamydomonas reinhardtii]
Length = 136
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
D V A+ +D S RGRQIKV+ KRTN PG+
Sbjct: 105 DAVNNAVLLDNSELRGRQIKVSHKRTNVPGL 135
>gi|449458309|ref|XP_004146890.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
2-like [Cucumis sativus]
Length = 237
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
D VQ A+ ++ES GRQ+KV+ KRTN PG+
Sbjct: 162 DAVQNALLLNESELHGRQLKVSAKRTNVPGM 192
>gi|449519186|ref|XP_004166616.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 229
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
D VQ A+ ++ES GRQ+KV+ KRTN PG+
Sbjct: 154 DAVQNALLLNESELHGRQLKVSAKRTNVPGM 184
>gi|157093141|gb|ABV22225.1| RNA recognition motif protein [Karlodinium micrum]
Length = 197
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
A VQ ++ ++ SLFRGRQ+KV KRTN PG
Sbjct: 110 ADEQSVQNSLLLNGSLFRGRQLKVMQKRTNVPGF 143
>gi|323454513|gb|EGB10383.1| hypothetical protein AURANDRAFT_23087 [Aureococcus anophagefferens]
Length = 187
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPG 35
V TA+ +D S+F+GRQ+KV KRTN PG
Sbjct: 129 VPTAVLLDNSIFKGRQLKVVAKRTNVPG 156
>gi|449301196|gb|EMC97207.1| hypothetical protein BAUCODRAFT_68306 [Baudoinia compniacensis UAMH
10762]
Length = 223
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ +++S FRGR IKV PKRTN PG++
Sbjct: 127 VTQALVLNDSQFRGRAIKVVPKRTNLPGMT 156
>gi|308459099|ref|XP_003091875.1| hypothetical protein CRE_30220 [Caenorhabditis remanei]
gi|308254855|gb|EFO98807.1| hypothetical protein CRE_30220 [Caenorhabditis remanei]
Length = 188
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
D V+ AM M+ S FR RQI V KRTN+PG+
Sbjct: 107 DSVENAMVMNGSTFRERQIVVTSKRTNKPGM 137
>gi|299747315|ref|XP_002911154.1| polyadenylate-binding protein 2 [Coprinopsis cinerea okayama7#130]
gi|298407463|gb|EFI27660.1| polyadenylate-binding protein 2 [Coprinopsis cinerea okayama7#130]
Length = 194
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRP 34
A+ + V A+AMD SLF+GR +KV KRTN P
Sbjct: 126 AEPEHVDAAVAMDNSLFKGRLLKVTAKRTNIP 157
>gi|217072312|gb|ACJ84516.1| unknown [Medicago truncatula]
gi|388501418|gb|AFK38775.1| unknown [Medicago truncatula]
Length = 216
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+ + ES GRQ+KV PKRTN PG+
Sbjct: 141 VQEALLLSESELHGRQLKVLPKRTNVPGM 169
>gi|398389564|ref|XP_003848243.1| hypothetical protein MYCGRDRAFT_77177 [Zymoseptoria tritici IPO323]
gi|339468117|gb|EGP83219.1| hypothetical protein MYCGRDRAFT_77177 [Zymoseptoria tritici IPO323]
Length = 199
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ +++S FRGR IKV PKRTN PG++
Sbjct: 128 VTPALVLNDSTFRGRAIKVVPKRTNLPGMT 157
>gi|302829278|ref|XP_002946206.1| hypothetical protein VOLCADRAFT_72471 [Volvox carteri f.
nagariensis]
gi|300269021|gb|EFJ53201.1| hypothetical protein VOLCADRAFT_72471 [Volvox carteri f.
nagariensis]
Length = 242
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGIST 38
D VQ A+ +D S RGRQ+KV KRTN PG+
Sbjct: 153 DAVQNAVLLDNSELRGRQLKVLQKRTNVPGLKV 185
>gi|255539953|ref|XP_002511041.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550156|gb|EEF51643.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 231
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
D VQ A+ ++ES GRQ+KV+ KRTN PG+
Sbjct: 156 DAVQNALLLNESELHGRQLKVSAKRTNIPGM 186
>gi|406603845|emb|CCH44661.1| hypothetical protein BN7_4230 [Wickerhamomyces ciferrii]
Length = 180
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRP 34
V ++ +++S+FRGR +KVNPKRTN P
Sbjct: 124 VVNSLVLNDSVFRGRNLKVNPKRTNIP 150
>gi|255581746|ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
gi|223528706|gb|EEF30719.1| poly-A binding protein, putative [Ricinus communis]
Length = 218
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
+Q A+ ++ES GRQ+KV PKRTN PG+
Sbjct: 143 IQEALLLNESELHGRQLKVLPKRTNVPGM 171
>gi|357440891|ref|XP_003590723.1| Polyadenylate-binding protein [Medicago truncatula]
gi|217072228|gb|ACJ84474.1| unknown [Medicago truncatula]
gi|355479771|gb|AES60974.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 187
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
D VQ A+ ++E+ GRQ+KV+ KRTN PG+
Sbjct: 145 DAVQNALILNETELHGRQLKVSAKRTNVPGL 175
>gi|406860694|gb|EKD13751.1| polyadenylate-binding protein 2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 194
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ +++S+F GR +KV PKRTN PG++
Sbjct: 119 VAQALVLNDSMFHGRNLKVVPKRTNLPGMT 148
>gi|414868204|tpg|DAA46761.1| TPA: hypothetical protein ZEAMMB73_590191 [Zea mays]
Length = 261
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMY 59
+ VQ A+ ++ES GRQ+KV KRTN PG+ PRGRG + A +Y
Sbjct: 207 EAVQEAIKLNESELHGRQLKVALKRTNIPGMKQ-----PRGRGFNQYRPYAFLY 255
>gi|440800318|gb|ELR21357.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 195
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRP 34
++ D V A+ +++++ GRQIKVNPKRTN P
Sbjct: 128 SEEDAVGNAVLLNDTVVHGRQIKVNPKRTNVP 159
>gi|384494630|gb|EIE85121.1| hypothetical protein RO3G_09831 [Rhizopus delemar RA 99-880]
Length = 203
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRP 34
V A+++D SLFR R +KV+PKRTN P
Sbjct: 133 VNAAVSLDNSLFRARLLKVSPKRTNVP 159
>gi|414868203|tpg|DAA46760.1| TPA: hypothetical protein ZEAMMB73_590191 [Zea mays]
Length = 306
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMY 59
+ VQ A+ ++ES GRQ+KV KRTN PG+ PRGRG + A +Y
Sbjct: 252 EAVQEAIKLNESELHGRQLKVALKRTNIPGMKQ-----PRGRGFNQYRPYAFLY 300
>gi|224114678|ref|XP_002339510.1| predicted protein [Populus trichocarpa]
gi|222832586|gb|EEE71063.1| predicted protein [Populus trichocarpa]
Length = 212
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
D +Q A+ ++ES GRQ+KV+ KRTN PG+
Sbjct: 151 DAIQNALLLNESELHGRQLKVSAKRTNVPGM 181
>gi|68076033|ref|XP_679936.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56500788|emb|CAH95197.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 172
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGR 47
V+TA+++ ES F+ RQIKV KR N PG + G RGR
Sbjct: 120 VRTALSLSESFFKKRQIKVCSKRRNIPGFNRPRMGAFRGR 159
>gi|334188309|ref|NP_001190511.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
gi|332008656|gb|AED96039.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
Length = 265
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR 49
VQ ++ ++ES GRQIKV+ KRTN PG+ RGRGR
Sbjct: 194 VQNSLILNESELHGRQIKVSAKRTNVPGMRQF-----RGRGR 230
>gi|290984354|ref|XP_002674892.1| predicted protein [Naegleria gruberi]
gi|284088485|gb|EFC42148.1| predicted protein [Naegleria gruberi]
Length = 155
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTT 39
V+ A+ ++ S FR R++KV KRTN PG+STT
Sbjct: 85 VENALQLNGSTFRNRELKVFAKRTNIPGLSTT 116
>gi|327302280|ref|XP_003235832.1| hypothetical protein TERG_02884 [Trichophyton rubrum CBS 118892]
gi|326461174|gb|EGD86627.1| hypothetical protein TERG_02884 [Trichophyton rubrum CBS 118892]
Length = 186
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 20/25 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTN 32
V A+ ++ESLFRGR IKV PKRTN
Sbjct: 121 VAQALVLNESLFRGRNIKVVPKRTN 145
>gi|315039445|ref|XP_003169098.1| polyadenylate-binding protein 2 [Arthroderma gypseum CBS 118893]
gi|311337519|gb|EFQ96721.1| polyadenylate-binding protein 2 [Arthroderma gypseum CBS 118893]
Length = 186
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 20/25 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTN 32
V A+ ++ESLFRGR IKV PKRTN
Sbjct: 121 VAQALVLNESLFRGRNIKVVPKRTN 145
>gi|401400261|ref|XP_003880750.1| hypothetical protein NCLIV_011840 [Neospora caninum Liverpool]
gi|325115161|emb|CBZ50717.1| hypothetical protein NCLIV_011840 [Neospora caninum Liverpool]
Length = 285
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 13/75 (17%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR---------GGPRGRGRGR----VSR 54
VQ A+ + +++F+ RQIKV KR N PG + GG GRGR + + R
Sbjct: 200 VQNAILLSDTVFKQRQIKVVAKRKNIPGFARGRGWRGGRMAAAGGMMGRGRPKRSLNLER 259
Query: 55 GAAMYGGYRPVRRAR 69
GG+RP+ R R
Sbjct: 260 DRGARGGFRPIYRPR 274
>gi|8843848|dbj|BAA97374.1| unnamed protein product [Arabidopsis thaliana]
Length = 267
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR 49
+ VQ ++ ++ES GRQIKV+ KRTN PG+ RGRGR
Sbjct: 154 EAVQNSLILNESELHGRQIKVSAKRTNVPGMRQF-----RGRGR 192
>gi|124507026|ref|XP_001352110.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23505139|emb|CAD51921.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 202
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG-------RGRVSRG 55
A V+TA+++ ES F+ RQIKV KR N PG + RGRG RGR+ +
Sbjct: 120 ADASSVRTALSLSESFFKKRQIKVCSKRRNIPGFNRPKISPFRGRGMKSALGVRGRLRQP 179
Query: 56 AAMYGGYRPVRRAR 69
+ +RP R R
Sbjct: 180 S-----FRPFYRGR 188
>gi|334188311|ref|NP_001190512.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
gi|332008657|gb|AED96040.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
Length = 142
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR 49
+ VQ ++ ++ES GRQIKV+ KRTN PG+ RGRGR
Sbjct: 69 EAVQNSLILNESELHGRQIKVSAKRTNVPGMRQF-----RGRGR 107
>gi|399217186|emb|CCF73873.1| unnamed protein product [Babesia microti strain RI]
Length = 145
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
A+ + V+ A+ ++E+LF+ R IKV KR N PG+S
Sbjct: 90 AQEESVENALLLNETLFKERLIKVTSKRKNIPGMS 124
>gi|68471223|ref|XP_720388.1| hypothetical protein CaO19.7097 [Candida albicans SC5314]
gi|77022430|ref|XP_888659.1| hypothetical protein CaO19_7097 [Candida albicans SC5314]
gi|46442253|gb|EAL01544.1| hypothetical protein CaO19.7097 [Candida albicans SC5314]
gi|76573472|dbj|BAE44556.1| hypothetical protein [Candida albicans]
gi|238883199|gb|EEQ46837.1| polyadenylate-binding protein 2 [Candida albicans WO-1]
Length = 187
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 3 AKRDEVQTAMA-MDESLFRGRQIKVNPKRTNRPGISTTNRGGP 44
A D V A+A +D S FR RQ+KV+ KRTN PGIS RG P
Sbjct: 112 ADTDAVNKAVATLDGSTFRERQLKVSAKRTNIPGIS-VKRGFP 153
>gi|66818257|ref|XP_642788.1| polyadenylate-binding protein 2 [Dictyostelium discoideum AX4]
gi|74997256|sp|Q54ZS8.1|PABP2_DICDI RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName:
Full=Poly(A)-binding protein II; Short=PABII
gi|60470900|gb|EAL68872.1| polyadenylate-binding protein 2 [Dictyostelium discoideum AX4]
Length = 222
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRP 34
++ + AMA+++S F RQ+K+ PKRTN P
Sbjct: 152 KESIINAMALNDSFFNERQLKITPKRTNLP 181
>gi|388498836|gb|AFK37484.1| unknown [Lotus japonicus]
Length = 200
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+A++ES GRQ+KV+ KRTN PG+
Sbjct: 124 VQEALALNESELHGRQLKVSGKRTNVPGM 152
>gi|390601291|gb|EIN10685.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 194
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRP 34
+ V A+A+D SLFRGR +KV KRTN P
Sbjct: 121 EHVDAAVALDNSLFRGRLLKVTAKRTNIP 149
>gi|21536704|gb|AAM61036.1| contains similarity to poly(A)-binding protein II [Arabidopsis
thaliana]
Length = 227
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR 49
VQ ++ ++ES GRQIKV+ KRTN PG+ RGRGR
Sbjct: 156 VQNSLILNESELHGRQIKVSAKRTNVPGMRQF-----RGRGR 192
>gi|18423239|ref|NP_568751.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
gi|15809838|gb|AAL06847.1| AT5g51120/MWD22_6 [Arabidopsis thaliana]
gi|15982733|gb|AAL09819.1| unknown protein [Arabidopsis thaliana]
gi|19310785|gb|AAL85123.1| unknown protein [Arabidopsis thaliana]
gi|21358850|gb|AAM47151.1| unknown protein [Arabidopsis thaliana]
gi|332008655|gb|AED96038.1| polyadenylate-binding protein 1 [Arabidopsis thaliana]
Length = 227
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR 49
VQ ++ ++ES GRQIKV+ KRTN PG+ RGRGR
Sbjct: 156 VQNSLILNESELHGRQIKVSAKRTNVPGMRQF-----RGRGR 192
>gi|66475216|ref|XP_627424.1| Sgn1p-like RRM domain containing protein [Cryptosporidium parvum
Iowa II]
gi|46228897|gb|EAK89746.1| Sgn1p-like RRM domain containing protein [Cryptosporidium parvum
Iowa II]
Length = 262
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPG 35
V+TA+ D ++FRGRQIKV+ KR N PG
Sbjct: 164 VETALKFDGAMFRGRQIKVSTKRKNIPG 191
>gi|85000163|ref|XP_954800.1| RNA poly(A)-binding protein [Theileria annulata strain Ankara]
gi|65302946|emb|CAI75324.1| RNA poly(A)-binding protein, putative [Theileria annulata]
Length = 176
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPG 35
+ D V A+ ++ESLF+ R IKV PKR N PG
Sbjct: 91 SNEDAVNNAIMLNESLFKERIIKVIPKRKNIPG 123
>gi|320582005|gb|EFW96224.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Ogataea parapolymorpha DL-1]
Length = 156
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNR 41
Q A+AM+ + FRGR + V PKRTN PGI+ R
Sbjct: 81 AQKAVAMNGTEFRGRTLTVTPKRTNYPGITNARR 114
>gi|67592644|ref|XP_665658.1| poly(A) binding protein II [Cryptosporidium hominis TU502]
gi|54656446|gb|EAL35428.1| poly(A) binding protein II [Cryptosporidium hominis]
Length = 263
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPG 35
V+TA+ D ++FRGRQIKV+ KR N PG
Sbjct: 165 VETALKFDGAMFRGRQIKVSTKRKNIPG 192
>gi|451855129|gb|EMD68421.1| hypothetical protein COCSADRAFT_272630 [Cochliobolus sativus
ND90Pr]
gi|452004159|gb|EMD96615.1| hypothetical protein COCHEDRAFT_1018478 [Cochliobolus
heterostrophus C5]
Length = 206
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ +D S FR R +KV PKRTN PG++
Sbjct: 123 VNEALVLDNSQFRNRNLKVVPKRTNLPGMT 152
>gi|358248311|ref|NP_001240115.1| uncharacterized protein LOC100784473 [Glycine max]
gi|255635956|gb|ACU18324.1| unknown [Glycine max]
Length = 197
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 8/48 (16%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS------TTN--RGGPRGR 47
VQ A+ ++ES GRQ+KV KRTN PG+ +TN GG RGR
Sbjct: 120 VQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSTNPYMGGLRGR 167
>gi|294933484|ref|XP_002780736.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239890777|gb|EER12531.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 226
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 23/28 (82%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPG 35
VQ A+ +++++FRGRQ+KV KRTN PG
Sbjct: 155 VQNALLLNDTMFRGRQLKVLQKRTNLPG 182
>gi|116201543|ref|XP_001226583.1| hypothetical protein CHGG_08656 [Chaetomium globosum CBS 148.51]
gi|88177174|gb|EAQ84642.1| hypothetical protein CHGG_08656 [Chaetomium globosum CBS 148.51]
Length = 250
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
V A+ +++S+F+GR IKV PKRTN PG+
Sbjct: 181 VAQALVLNDSVFKGRNIKVEPKRTNIPGM 209
>gi|71026927|ref|XP_763107.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350060|gb|EAN30824.1| RNA binding protein, putative [Theileria parva]
Length = 151
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
+ D V A+ ++ESLF+ R IKV PKR N PG +
Sbjct: 91 SNEDAVNNAIMLNESLFKERIIKVIPKRKNIPGFN 125
>gi|225462880|ref|XP_002273141.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Vitis
vinifera]
Length = 179
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+ ++ES GRQ+KV+ KRTN PG+
Sbjct: 109 VQEALLLNESELHGRQLKVSAKRTNVPGL 137
>gi|8918490|dbj|BAA97656.1| RNA-binding protein [Candida boidinii]
Length = 255
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+++++SLF+GR +K++ KRTN PG S
Sbjct: 178 VPQALSLNDSLFKGRNLKISAKRTNVPGFS 207
>gi|241957093|ref|XP_002421266.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
gi|223644610|emb|CAX40598.1| cytoplasmic RNA-binding protein, putative [Candida dubliniensis
CD36]
Length = 187
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 6 DEVQTAMA-MDESLFRGRQIKVNPKRTNRPGISTTNRGGP 44
D V A+A +D S FR RQ+KV+ KRTN PGIS RG P
Sbjct: 115 DAVDKAVATLDGSTFRERQLKVSAKRTNIPGIS-VKRGFP 153
>gi|296087478|emb|CBI34067.3| unnamed protein product [Vitis vinifera]
Length = 180
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+ ++ES GRQ+KV+ KRTN PG+
Sbjct: 110 VQEALLLNESELHGRQLKVSAKRTNVPGL 138
>gi|225462878|ref|XP_002273112.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Vitis
vinifera]
Length = 186
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+ ++ES GRQ+KV+ KRTN PG+
Sbjct: 116 VQEALLLNESELHGRQLKVSAKRTNVPGL 144
>gi|255647938|gb|ACU24426.1| unknown [Glycine max]
Length = 218
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
+ VQ A+ ++ES GRQ+KV PKRTN PG+
Sbjct: 144 EAVQEALLLNESELHGRQLKVLPKRTNVPGM 174
>gi|209877356|ref|XP_002140120.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555726|gb|EEA05771.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 206
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
+ + V TA+ D ++FRGRQIKV KR N PG +
Sbjct: 115 CEPEAVDTALKFDGAMFRGRQIKVCSKRKNIPGFT 149
>gi|302421908|ref|XP_003008784.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
gi|261351930|gb|EEY14358.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
Length = 205
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRP 34
V A+ ++ES+F+GR IKV PKRTN P
Sbjct: 135 VAQALVLNESVFKGRNIKVVPKRTNIP 161
>gi|346969940|gb|EGY13392.1| polyadenylate-binding protein [Verticillium dahliae VdLs.17]
Length = 205
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRP 34
V A+ ++ES+F+GR IKV PKRTN P
Sbjct: 135 VAQALVLNESVFKGRNIKVVPKRTNIP 161
>gi|296803623|ref|XP_002842664.1| RNP domain-containing protein [Arthroderma otae CBS 113480]
gi|238846014|gb|EEQ35676.1| RNP domain-containing protein [Arthroderma otae CBS 113480]
Length = 186
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 20/25 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTN 32
V A+ ++ESLFRGR +KV PKRTN
Sbjct: 121 VAQALVLNESLFRGRNLKVVPKRTN 145
>gi|70943999|ref|XP_741979.1| RNA-binding protein [Plasmodium chabaudi chabaudi]
gi|56520699|emb|CAH74539.1| RNA-binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 194
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 17/60 (28%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPG-----------------ISTTNRGGPRGRGRG 50
V+TA+++ ES F+ RQIKV KR N PG +S+ R GP RGRG
Sbjct: 122 VRTALSLSESFFKKRQIKVCSKRRNIPGFNRPRMSAFRGRVMKSPLSSRGRFGPFYRGRG 181
>gi|345121426|gb|AEN74948.1| poly(A)-binding protein 1 [Citrus sinensis]
Length = 234
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTT-----NRGGPRGR 47
D VQ A+ ++E+ GRQ+KV+ KRTN PG+ N G RGR
Sbjct: 159 DAVQNALLLNETELHGRQLKVSAKRTNIPGMKQFRGRRPNTFGFRGR 205
>gi|346464877|gb|AEO32283.1| hypothetical protein [Amblyomma maculatum]
Length = 207
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+ ++ES GRQ+KV+ KRTN PG+
Sbjct: 142 VQEALQLNESELHGRQLKVSAKRTNVPGM 170
>gi|403363390|gb|EJY81440.1| RNA recognition motif protein [Oxytricha trifallax]
Length = 388
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRP 34
A + Q + ++ESLF+GRQI V PKR N+P
Sbjct: 274 ATLEGAQRSKLLNESLFKGRQITVQPKRKNKP 305
>gi|168028169|ref|XP_001766601.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682246|gb|EDQ68666.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 238
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYRPV 65
+ VQ A+ + ES R IKV KRTN PG+ +G R A Y GYRP
Sbjct: 147 EAVQNAILLSESELHNRPIKVTAKRTNVPGM------------KGYRGRPYAPYYGYRPR 194
Query: 66 R 66
R
Sbjct: 195 R 195
>gi|268536756|ref|XP_002633513.1| Hypothetical protein CBG05375 [Caenorhabditis briggsae]
Length = 180
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRP 34
A + ++ A+ M+ SLFR RQI V KRTN+P
Sbjct: 103 ASAESIENALVMNGSLFRSRQIVVTAKRTNKP 134
>gi|400601143|gb|EJP68786.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 194
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 20/25 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTN 32
V A+ ++ES+F+GR IKV PKRTN
Sbjct: 125 VAQALVLNESVFKGRNIKVTPKRTN 149
>gi|242035047|ref|XP_002464918.1| hypothetical protein SORBIDRAFT_01g028780 [Sorghum bicolor]
gi|241918772|gb|EER91916.1| hypothetical protein SORBIDRAFT_01g028780 [Sorghum bicolor]
Length = 209
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYG 60
VQ A+ ++E+ GR +KV PKRTN PG+ + RGR V YG
Sbjct: 147 VQNALLLNETELHGRPLKVCPKRTNIPGMK-------QSRGRHSVYPFYPSYG 192
>gi|268536758|ref|XP_002633514.1| Hypothetical protein CBG05376 [Caenorhabditis briggsae]
Length = 182
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRP 34
A + ++ A+ M+ SLFR RQI V KRTN+P
Sbjct: 102 ASAESIENALVMNGSLFRSRQIVVTAKRTNKP 133
>gi|389583077|dbj|GAB65813.1| RNA-binding protein, partial [Plasmodium cynomolgi strain B]
Length = 213
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 48
A V+TA+++ ES F+ RQIKV KR N PG + RGR
Sbjct: 78 ADASSVRTALSLSESFFKKRQIKVCSKRRNIPGFNRPKISPFRGRS 123
>gi|297792425|ref|XP_002864097.1| hypothetical protein ARALYDRAFT_918145 [Arabidopsis lyrata subsp.
lyrata]
gi|297309932|gb|EFH40356.1| hypothetical protein ARALYDRAFT_918145 [Arabidopsis lyrata subsp.
lyrata]
Length = 228
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ ++ ++ES GRQIKV+ KRTN PG+
Sbjct: 158 VQNSLILNESELHGRQIKVSAKRTNVPGM 186
>gi|281209044|gb|EFA83219.1| polyadenylate-binding protein 2 [Polysphondylium pallidum PN500]
Length = 202
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPG 35
R+ VQ A+ ++++ F RQIKV KRTN P
Sbjct: 133 VDRESVQNALVLNDTTFNNRQIKVTAKRTNLPA 165
>gi|387169522|gb|AFJ66183.1| hypothetical protein 11M19.19 [Arabidopsis halleri]
Length = 228
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ ++ ++ES GRQIKV+ KRTN PG+
Sbjct: 158 VQNSLILNESELHGRQIKVSAKRTNVPGM 186
>gi|330933365|ref|XP_003304145.1| hypothetical protein PTT_16602 [Pyrenophora teres f. teres 0-1]
gi|311319437|gb|EFQ87756.1| hypothetical protein PTT_16602 [Pyrenophora teres f. teres 0-1]
Length = 193
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPG 35
V A+ +D S FR R +KV PKRTN PG
Sbjct: 123 VNEALVLDNSEFRSRNLKVVPKRTNLPG 150
>gi|224140775|ref|XP_002323754.1| predicted protein [Populus trichocarpa]
gi|222866756|gb|EEF03887.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+ ++ES GRQ+KV KRTN PG+
Sbjct: 124 VQEALLLNESELHGRQLKVTAKRTNVPGM 152
>gi|358248734|ref|NP_001239931.1| uncharacterized protein LOC100791351 [Glycine max]
gi|255647673|gb|ACU24298.1| unknown [Glycine max]
Length = 197
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+ ++ES GRQ+KV KRTN PG+
Sbjct: 120 VQEALLLNESELHGRQLKVTAKRTNIPGM 148
>gi|357476333|ref|XP_003608452.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355509507|gb|AES90649.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 199
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+ ++ES GRQ+KV KRTN PG+
Sbjct: 121 VQEALLLNESELHGRQLKVTAKRTNVPGM 149
>gi|388515797|gb|AFK45960.1| unknown [Lotus japonicus]
Length = 171
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
+ VQ A+ ++ES GRQ+KV+ KRTN PG+
Sbjct: 98 EAVQNAVMLNESELHGRQLKVSAKRTNVPGM 128
>gi|449438769|ref|XP_004137160.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 196
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+ ++ES GRQ+KV KRTN PG+
Sbjct: 121 VQEALLLNESELHGRQLKVTAKRTNIPGM 149
>gi|115533906|ref|NP_495022.2| Protein EEED8.4 [Caenorhabditis elegans]
gi|114152917|sp|Q09295.2|YQO4_CAEEL RecName: Full=Putative RNA-binding protein EEED8.4
gi|351060984|emb|CCD68731.1| Protein EEED8.4 [Caenorhabditis elegans]
Length = 191
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG 46
++ A+ M+ SLFR R I V KRTN PG+ RG RG
Sbjct: 109 IENALVMNGSLFRSRPIVVTAKRTNIPGMGHGVRGSSRG 147
>gi|156097476|ref|XP_001614771.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148803645|gb|EDL45044.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 202
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 11/58 (18%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGIS----TTNRG-------GPRGRGR 49
A V+TA+++ ES F+ RQIKV KR N PG + + RG GPRGR R
Sbjct: 120 ADASSVRTALSLSESFFKKRQIKVCSKRRNIPGFNRPKISPFRGRSMKATLGPRGRLR 177
>gi|50420005|ref|XP_458535.1| DEHA2D01540p [Debaryomyces hansenii CBS767]
gi|49654202|emb|CAG86667.1| DEHA2D01540p [Debaryomyces hansenii CBS767]
Length = 218
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 3 AKRDEVQTAMA-MDESLFRGRQIKVNPKRTNRPGISTTN 40
A D V A+A +D S FR R++KV KRTN PG+S+TN
Sbjct: 138 ADIDGVNKAVATLDGSTFRDRELKVCAKRTNVPGMSSTN 176
>gi|255569758|ref|XP_002525843.1| poly-A binding protein, putative [Ricinus communis]
gi|223534848|gb|EEF36537.1| poly-A binding protein, putative [Ricinus communis]
Length = 198
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+ ++ES GRQ+KV KRTN PG+
Sbjct: 123 VQEALLLNESELHGRQLKVTAKRTNVPGM 151
>gi|17532829|ref|NP_495021.1| Protein EEED8.12 [Caenorhabditis elegans]
gi|2500592|sp|Q09301.1|YQOC_CAEEL RecName: Full=Putative RNA-binding protein EEED8.12
gi|351060993|emb|CCD68740.1| Protein EEED8.12 [Caenorhabditis elegans]
Length = 197
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRG 46
++ A+ M+ SLFR R I V KRTN PG+ RG RG
Sbjct: 115 IENALVMNGSLFRSRPIVVTAKRTNIPGMGHGVRGSSRG 153
>gi|344299871|gb|EGW30224.1| hypothetical protein SPAPADRAFT_144523 [Spathaspora passalidarum
NRRL Y-27907]
Length = 217
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 3 AKRDEVQTAMA-MDESLFRGRQIKVNPKRTNRPGI 36
A D V A+A +D S+FR RQ+KV+ KRTN PGI
Sbjct: 143 ADVDGVNKAVATLDGSMFRDRQLKVSAKRTNIPGI 177
>gi|308456423|ref|XP_003090653.1| hypothetical protein CRE_01432 [Caenorhabditis remanei]
gi|308261964|gb|EFP05917.1| hypothetical protein CRE_01432 [Caenorhabditis remanei]
Length = 183
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
D + AM M+ S FRGR I V KRTN+PG+
Sbjct: 106 DNAENAMVMNGSTFRGRPIVVTTKRTNKPGM 136
>gi|354544353|emb|CCE41076.1| hypothetical protein CPAR2_300650 [Candida parapsilosis]
Length = 217
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 21/24 (87%)
Query: 14 MDESLFRGRQIKVNPKRTNRPGIS 37
+D+S+FR R++KV PKRTN PGI+
Sbjct: 155 LDDSVFRDRRLKVLPKRTNIPGIN 178
>gi|308459109|ref|XP_003091880.1| hypothetical protein CRE_30217 [Caenorhabditis remanei]
gi|308254860|gb|EFO98812.1| hypothetical protein CRE_30217 [Caenorhabditis remanei]
Length = 205
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
V+ AM M+ S FR RQI V KRTN+PG+
Sbjct: 130 VENAMVMNGSAFRERQIVVTAKRTNKPGM 158
>gi|388515309|gb|AFK45716.1| unknown [Lotus japonicus]
Length = 218
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+ ++ES GRQ+KV+ KRTN PG+
Sbjct: 146 VQNAVMLNESELHGRQLKVSAKRTNVPGM 174
>gi|224060413|ref|XP_002300187.1| predicted protein [Populus trichocarpa]
gi|222847445|gb|EEE84992.1| predicted protein [Populus trichocarpa]
Length = 199
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+ ++ES GRQ+KV KRTN PG+
Sbjct: 124 VQEALLLNESELHGRQLKVTVKRTNLPGM 152
>gi|189195646|ref|XP_001934161.1| polyadenylate-binding protein 2 (Poly(A)-binding protein 2)
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187980040|gb|EDU46666.1| polyadenylate-binding protein 2 (Poly(A)-binding protein 2)
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 207
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V A+ +D S FR R +KV PKRTN PG++
Sbjct: 123 VNEALVLDGSEFRNRNLKVVPKRTNLPGMT 152
>gi|392576908|gb|EIW70038.1| hypothetical protein TREMEDRAFT_43661 [Tremella mesenterica DSM
1558]
Length = 186
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
VQ A+ +++S+FRGR + V KRTN PG++
Sbjct: 131 VQNALVLNDSMFRGRLLSVREKRTNIPGMN 160
>gi|221054742|ref|XP_002258510.1| rna-binding protein [Plasmodium knowlesi strain H]
gi|193808579|emb|CAQ39282.1| rna-binding protein, putative [Plasmodium knowlesi strain H]
Length = 202
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGR--GRVSRGAAMYG 60
A V+TA+++ ES F+ RQIKV KR N PG + RGR RG
Sbjct: 120 ADASSVRTALSLSESFFKKRQIKVCSKRRNIPGFNRPRISPFRGRSIKPSFAPRGRLRQP 179
Query: 61 GYRPVRRAR 69
+RP R R
Sbjct: 180 SFRPFYRGR 188
>gi|359497541|ref|XP_003635560.1| PREDICTED: polyadenylate-binding protein 2-like, partial [Vitis
vinifera]
Length = 130
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
+ VQ A+ ++ES GRQ+KV KRTN PG+
Sbjct: 53 EAVQEALLLNESELHGRQLKVLAKRTNVPGM 83
>gi|15238390|ref|NP_201329.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|14423494|gb|AAK62429.1|AF386984_1 poly(A)-binding protein II-like [Arabidopsis thaliana]
gi|10178188|dbj|BAB11662.1| poly(A)-binding protein II-like [Arabidopsis thaliana]
gi|23197620|gb|AAN15337.1| poly(A)-binding protein II-like [Arabidopsis thaliana]
gi|332010647|gb|AED98030.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 220
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+ ++ES GRQ+KV KRTN PG+
Sbjct: 145 VQEALQLNESELHGRQLKVLQKRTNVPGL 173
>gi|71993551|ref|NP_500666.2| Protein T08B6.5 [Caenorhabditis elegans]
gi|373220496|emb|CCD73994.1| Protein T08B6.5 [Caenorhabditis elegans]
Length = 177
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
K + VQ A+ + ++FR R+I V KRTN+PG+
Sbjct: 96 KLESVQLALVLSGTMFRNRKIMVTLKRTNKPGM 128
>gi|296087007|emb|CBI33270.3| unnamed protein product [Vitis vinifera]
Length = 145
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
+ VQ A+ ++ES GRQ+KV KRTN PG+
Sbjct: 68 EAVQEALLLNESELHGRQLKVLAKRTNVPGM 98
>gi|308459103|ref|XP_003091877.1| hypothetical protein CRE_30228 [Caenorhabditis remanei]
gi|308254857|gb|EFO98809.1| hypothetical protein CRE_30228 [Caenorhabditis remanei]
Length = 90
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTT 39
K V A+ M+ S+FR R+I V KRTN+PG+ T
Sbjct: 10 KISSVDNAIVMNGSIFRDRKIVVTSKRTNKPGMGAT 45
>gi|297797553|ref|XP_002866661.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312496|gb|EFH42920.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 220
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
VQ A+ ++ES GRQ+KV KRTN PG+
Sbjct: 145 VQEALQLNESELHGRQLKVLQKRTNVPGL 173
>gi|378729234|gb|EHY55693.1| apoptosis regulator BCL-W [Exophiala dermatitidis NIH/UT8656]
Length = 206
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 20/25 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTN 32
V A+ ++ES+FRGR +KV PKRTN
Sbjct: 122 VAQALVLNESVFRGRNLKVVPKRTN 146
>gi|453080432|gb|EMF08483.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 211
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 20/25 (80%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTN 32
V +A+ ++ES+FR R IKV PKRTN
Sbjct: 123 VTSALVLNESVFRNRNIKVVPKRTN 147
>gi|390478033|ref|XP_002761311.2| PREDICTED: embryonic polyadenylate-binding protein 2-like
[Callithrix jacchus]
Length = 212
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 24 IKVNPKRTNRPGISTTNRGGPRGR 47
+V PKRTN PGIS+T+RGG RG
Sbjct: 155 FQVLPKRTNFPGISSTDRGGLRGH 178
>gi|448113963|ref|XP_004202460.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
gi|359383328|emb|CCE79244.1| Piso0_001296 [Millerozyma farinosa CBS 7064]
Length = 211
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 6 DEVQTAMA-MDESLFRGRQIKVNPKRTNRPGISTTN 40
D V A+A +D S FR R+IKV KRTN PG+S++N
Sbjct: 141 DAVNKAIATLDGSTFRDREIKVLSKRTNVPGLSSSN 176
>gi|302814589|ref|XP_002988978.1| hypothetical protein SELMODRAFT_159820 [Selaginella moellendorffii]
gi|300143315|gb|EFJ10007.1| hypothetical protein SELMODRAFT_159820 [Selaginella moellendorffii]
Length = 178
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRG 48
+ VQ A+ ++ES GR IKV KRTN PG+ RGRG
Sbjct: 98 EAVQNALILNESELHGRPIKVAAKRTNVPGLKQH-----RGRG 135
>gi|307107787|gb|EFN56029.1| hypothetical protein CHLNCDRAFT_13079, partial [Chlorella
variabilis]
Length = 132
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
D V A +D S R R IKV+PKRTN PG+
Sbjct: 101 DAVTNACLLDGSELRNRAIKVSPKRTNVPGM 131
>gi|168065663|ref|XP_001784768.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663676|gb|EDQ50428.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 219
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 12/57 (21%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTTNRGGPRGRGRGRVSRGAAMYGGYRP 64
VQ A+ ++ES RQ+KV KRTN PG+ RG P A + GYRP
Sbjct: 151 VQNAILLNESELHNRQLKVTAKRTNVPGMKAY-RGRPY-----------APFYGYRP 195
>gi|449451417|ref|XP_004143458.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449496421|ref|XP_004160130.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
+Q A+ ++E+ GRQ+KV KRTN PG+
Sbjct: 136 IQEALLLNETELHGRQLKVQQKRTNVPGM 164
>gi|340939483|gb|EGS20105.1| putative poly(A) binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 211
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRP 34
V A+ +++S+F+GR IKV PKRTN P
Sbjct: 128 VAQALVLNDSVFKGRNIKVAPKRTNIP 154
>gi|341895844|gb|EGT51779.1| hypothetical protein CAEBREN_09841 [Caenorhabditis brenneri]
Length = 187
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRP 34
+D V+ A+ M E++FR R+I V KRTN P
Sbjct: 104 KDSVEMALVMHETMFRDRRIVVTAKRTNVP 133
>gi|268536830|ref|XP_002633550.1| Hypothetical protein CBG05418 [Caenorhabditis briggsae]
Length = 181
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRP 34
+ ++ A+ M+ SLFR RQI V KRTN P
Sbjct: 101 ESIENALVMNGSLFRARQIVVTAKRTNVP 129
>gi|388500100|gb|AFK38116.1| unknown [Medicago truncatula]
Length = 199
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 9 QTAMAMDESLFRGRQIKVNPKRTNRPGI 36
Q A+ ++ES GRQ+KV KRTN PG+
Sbjct: 122 QEALLLNESELHGRQLKVTAKRTNVPGM 149
>gi|341890455|gb|EGT46390.1| hypothetical protein CAEBREN_09794 [Caenorhabditis brenneri]
Length = 188
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 5 RDEVQTAMAMDESLFRGRQIKVNPKRTNRP 34
++ V+ A+ M ES+FR R+I V KRTN P
Sbjct: 106 KNSVEMALLMHESIFRDRKIVVTAKRTNVP 135
>gi|403223382|dbj|BAM41513.1| predicted protein [Theileria orientalis strain Shintoku]
Length = 150
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 3 AKRDEVQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
+ D V A+ +++SLF+ R IKV PKR N PG +
Sbjct: 91 SSEDAVGNAVMLNDSLFKERIIKVIPKRKNIPGFN 125
>gi|341895850|gb|EGT51785.1| hypothetical protein CAEBREN_00783 [Caenorhabditis brenneri]
Length = 186
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 4 KRDEVQTAMAMDESLFRGRQIKVNPKRTNRP 34
+++ V+ A+ M E+ FR RQI V KRTN P
Sbjct: 103 EKESVEMALIMHETTFRDRQIVVTAKRTNVP 133
>gi|145348085|ref|XP_001418487.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578716|gb|ABO96780.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 144
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 6 DEVQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
D V A+ +D + RGR+IKV+ KRTN PG+
Sbjct: 113 DAVHNAILLDGTEIRGRKIKVSAKRTNVPGM 143
>gi|118371394|ref|XP_001018896.1| polyadenylate-binding protein 2 [Tetrahymena thermophila]
gi|89300663|gb|EAR98651.1| polyadenylate-binding protein 2 [Tetrahymena thermophila SB210]
Length = 180
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGI 36
V+ A A+ +S+ RGR IKV PKRTN+ G
Sbjct: 112 VELAKALSDSIHRGRAIKVLPKRTNQHGF 140
>gi|308459121|ref|XP_003091886.1| hypothetical protein CRE_30229 [Caenorhabditis remanei]
gi|308254866|gb|EFO98818.1| hypothetical protein CRE_30229 [Caenorhabditis remanei]
Length = 183
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTT 39
V A+ M+ S+FR R+I V KRTN+PG+ T
Sbjct: 107 VDNAIVMNGSIFRDRKIVVTSKRTNKPGMGAT 138
>gi|388582273|gb|EIM22578.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 202
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGIS 37
V+ A A++ESLF+GR IKV KR N P +
Sbjct: 145 VENASALNESLFKGRLIKVVAKRKNVPFFA 174
>gi|308456413|ref|XP_003090648.1| hypothetical protein CRE_01435 [Caenorhabditis remanei]
gi|308261959|gb|EFP05912.1| hypothetical protein CRE_01435 [Caenorhabditis remanei]
Length = 197
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTT 39
V A+ M+ S FR RQI V KRTN+PG+ T
Sbjct: 122 VANAIVMNGSTFRERQIVVTLKRTNKPGMGAT 153
>gi|308448720|ref|XP_003087733.1| hypothetical protein CRE_13229 [Caenorhabditis remanei]
gi|308253205|gb|EFO97157.1| hypothetical protein CRE_13229 [Caenorhabditis remanei]
Length = 194
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTT 39
V A+ M+ S FR RQI V KRTN+PG+ T
Sbjct: 119 VANAIVMNGSTFRERQIVVTLKRTNKPGMGAT 150
>gi|308466761|ref|XP_003095632.1| hypothetical protein CRE_13667 [Caenorhabditis remanei]
gi|308244631|gb|EFO88583.1| hypothetical protein CRE_13667 [Caenorhabditis remanei]
Length = 160
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 8 VQTAMAMDESLFRGRQIKVNPKRTNRPGISTT 39
V A+ M+ S FR RQI V KRTN+PG+ T
Sbjct: 85 VANAIVMNGSTFRERQIVVTLKRTNKPGMGAT 116
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,063,129,306
Number of Sequences: 23463169
Number of extensions: 37525758
Number of successful extensions: 144036
Number of sequences better than 100.0: 537
Number of HSP's better than 100.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 143114
Number of HSP's gapped (non-prelim): 729
length of query: 69
length of database: 8,064,228,071
effective HSP length: 41
effective length of query: 28
effective length of database: 7,102,238,142
effective search space: 198862667976
effective search space used: 198862667976
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)