BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13494
(143 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DEI8|MIA40_DANRE Mitochondrial intermembrane space import and assembly protein 40
OS=Danio rerio GN=chchd4 PE=2 SV=1
Length = 146
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 70/112 (62%), Positives = 84/112 (75%), Gaps = 5/112 (4%)
Query: 1 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEPQP-----GLILPDGSINWNCPCLGGMA 55
MS C++EGKD IIF TKEDH PS+ EL +P GLILP+G INWNCPCLGGMA
Sbjct: 1 MSYCKQEGKDCIIFVTKEDHEAPSNAELVEDDPNDPYEDHGLILPNGDINWNCPCLGGMA 60
Query: 56 TGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYKQNDDDD 107
+GPCG QF++AFSCFHYS +E KG +C E F+ MQ+CM +YP LY Q DD+D
Sbjct: 61 SGPCGQQFKDAFSCFHYSKEEIKGSDCVENFRGMQECMQKYPELYPQEDDND 112
>sp|Q8N4Q1|MIA40_HUMAN Mitochondrial intermembrane space import and assembly protein 40
OS=Homo sapiens GN=CHCHD4 PE=1 SV=1
Length = 142
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 82/107 (76%), Gaps = 5/107 (4%)
Query: 1 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEP-----QPGLILPDGSINWNCPCLGGMA 55
MS C++EGKD IIF TKEDH PSS EL +P + GLILP+G+INWNCPCLGGMA
Sbjct: 1 MSYCRQEGKDRIIFVTKEDHETPSSAELVADDPNDPYEEHGLILPNGNINWNCPCLGGMA 60
Query: 56 TGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYKQ 102
+GPCG QF+ AFSCFHYST+E KG +C + F+ MQ+CM +YP LY Q
Sbjct: 61 SGPCGEQFKSAFSCFHYSTEEIKGSDCVDQFRAMQECMQKYPDLYPQ 107
>sp|Q5BJN5|MIA40_RAT Mitochondrial intermembrane space import and assembly protein 40
OS=Rattus norvegicus GN=Chchd4 PE=2 SV=1
Length = 139
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 98/140 (70%), Gaps = 7/140 (5%)
Query: 1 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEP-----QPGLILPDGSINWNCPCLGGMA 55
MS C++EGKD IIF TKEDH PSS EL +P + GLILP+G INWNCPCLGGMA
Sbjct: 1 MSYCRQEGKDRIIFVTKEDHETPSSAELVADDPNDPYEEHGLILPNGDINWNCPCLGGMA 60
Query: 56 TGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYKQNDDDDEDLDDVKD 115
+GPCG QF+ AFSCFHYST++ KG +C + F+ MQ+CM +YP LY Q+++++E+ V
Sbjct: 61 SGPCGEQFKSAFSCFHYSTEDIKGSDCIDQFRAMQECMQKYPDLYPQDEEEEEEAKPV-- 118
Query: 116 ESIRKEAQEKADRIIEQADS 135
E + + A KA EQ S
Sbjct: 119 EPVEETADTKASAAKEQGAS 138
>sp|Q63ZK1|MI40B_XENLA Mitochondrial intermembrane space import and assembly protein 40-B
OS=Xenopus laevis GN=chchd4-b PE=2 SV=1
Length = 139
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 80/107 (74%), Gaps = 5/107 (4%)
Query: 1 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEP-----QPGLILPDGSINWNCPCLGGMA 55
MS C++EGKD IIF TKEDH PSS EL +P + GLILP+G INWNCPCLGGMA
Sbjct: 1 MSYCRQEGKDKIIFVTKEDHETPSSAELIADDPNDPFEEQGLILPNGDINWNCPCLGGMA 60
Query: 56 TGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYKQ 102
+GPCG QF+ AFSCFHYS +E KG +C + F+ MQ+CM +YP LY Q
Sbjct: 61 SGPCGEQFKSAFSCFHYSQEEIKGSDCLDQFRAMQECMQKYPELYPQ 107
>sp|Q8VEA4|MIA40_MOUSE Mitochondrial intermembrane space import and assembly protein 40
OS=Mus musculus GN=Chchd4 PE=1 SV=1
Length = 139
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/140 (53%), Positives = 97/140 (69%), Gaps = 7/140 (5%)
Query: 1 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEP-----QPGLILPDGSINWNCPCLGGMA 55
MS C++EGKD IIF TKEDH PSS EL +P + GLILP+G INWNCPCLGGMA
Sbjct: 1 MSYCRQEGKDRIIFVTKEDHETPSSAELVADDPNDPYEEHGLILPNGDINWNCPCLGGMA 60
Query: 56 TGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYKQNDDDDEDLDDVKD 115
+GPCG QF+ AFSCFHYST++ KG +C + F+ MQ+CM +YP LY Q+++++E+ V
Sbjct: 61 SGPCGEQFKSAFSCFHYSTEDIKGSDCIDQFRAMQECMQKYPDLYPQDEEEEEEAKPV-- 118
Query: 116 ESIRKEAQEKADRIIEQADS 135
E + + A K EQ S
Sbjct: 119 EPVEETADTKVSAAKEQGTS 138
>sp|Q6PBC3|MIA40_XENTR Mitochondrial intermembrane space import and assembly protein 40
OS=Xenopus tropicalis GN=chchd4 PE=2 SV=1
Length = 139
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 79/107 (73%), Gaps = 5/107 (4%)
Query: 1 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEPQ-----PGLILPDGSINWNCPCLGGMA 55
MS C++EGKD IIF TKEDH PSS EL +P GLILP+G INWNCPCLGGMA
Sbjct: 1 MSYCRQEGKDKIIFVTKEDHETPSSAELIADDPNDPYEDHGLILPNGDINWNCPCLGGMA 60
Query: 56 TGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYKQ 102
+GPCG QF+ AFSCFHYS +E KG +C + F+ MQ+CM +YP +Y Q
Sbjct: 61 SGPCGEQFKSAFSCFHYSQEEIKGSDCLDQFRAMQECMQKYPDIYPQ 107
>sp|Q6NU12|MI40A_XENLA Mitochondrial intermembrane space import and assembly protein 40-A
OS=Xenopus laevis GN=chchd4-a PE=2 SV=1
Length = 139
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 78/105 (74%), Gaps = 5/105 (4%)
Query: 1 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEPQ-----PGLILPDGSINWNCPCLGGMA 55
MS C++EGKD IIF TKEDH PSS EL +P GLILP+G INWNCPCLGGMA
Sbjct: 1 MSYCRQEGKDKIIFVTKEDHETPSSAELIADDPNDPYEDQGLILPNGDINWNCPCLGGMA 60
Query: 56 TGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLY 100
+GPCG QF+ AFSCFHYS +E KG +C + F+ MQ+CM +YP LY
Sbjct: 61 SGPCGEQFKSAFSCFHYSQEEIKGSDCLDQFRGMQECMQKYPDLY 105
>sp|Q2KHZ4|MIA40_BOVIN Mitochondrial intermembrane space import and assembly protein 40
OS=Bos taurus GN=CHCHD4 PE=2 SV=1
Length = 137
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 80/107 (74%), Gaps = 5/107 (4%)
Query: 1 MSTCQREGKDFIIFATKEDHAIPSSVELPPPEP-----QPGLILPDGSINWNCPCLGGMA 55
M+ C++EGKD IIF TKEDH PS+ EL +P + GLILP+G INWNCPCLGGMA
Sbjct: 1 MAYCRQEGKDRIIFVTKEDHETPSNAELVADDPNDPYEEHGLILPNGDINWNCPCLGGMA 60
Query: 56 TGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYKQ 102
+GPCG QF+ AFSCFHYS ++ KG +C + F+ MQ+CM +YP LY Q
Sbjct: 61 SGPCGEQFKAAFSCFHYSKEDVKGSDCVDQFRAMQECMQKYPDLYPQ 107
>sp|P36046|MIA40_YEAST Mitochondrial intermembrane space import and assembly protein 40
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=MIA40 PE=1 SV=2
Length = 403
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 68/109 (62%), Gaps = 10/109 (9%)
Query: 36 GLILPD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMA 94
G PD G INW+CPCLGGMA GPCG +F+ AFSCF YS EPKG++C E F+ MQDC
Sbjct: 283 GAYNPDTGEINWDCPCLGGMAHGPCGEEFKSAFSCFVYSEAEPKGIDCVEKFQHMQDCFR 342
Query: 95 QYPTLY----KQNDDDDEDLDDVKDESIR-----KEAQEKADRIIEQAD 134
+YP Y K+ DD+E D VK +I A+E A + EQ+D
Sbjct: 343 KYPEHYAEQLKETSDDEEPQDKVKVNTIESAPNVSSAKENAAKKAEQSD 391
>sp|P0CM68|MIA40_CRYNJ Mitochondrial intermembrane space import and assembly protein 40
OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21 / ATCC MYA-565) GN=MIA40 PE=3 SV=1
Length = 242
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 27 ELPPPEPQPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEA 85
E EP G P+ G INW+CPCLGGMATGPCG QF+ AFSCF YS EPKGV+C E
Sbjct: 122 EAEASEPSQGAYNPETGEINWDCPCLGGMATGPCGEQFKAAFSCFVYSEAEPKGVDCVEL 181
Query: 86 FKTMQDCMAQYPTLYKQND 104
FK MQDC ++P +Y + D
Sbjct: 182 FKVMQDCFREHPEIYGEVD 200
>sp|P0CM69|MIA40_CRYNB Mitochondrial intermembrane space import and assembly protein 40
OS=Cryptococcus neoformans var. neoformans serotype D
(strain B-3501A) GN=MIA40 PE=3 SV=1
Length = 242
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 32 EPQPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQ 90
EP G P+ G INW+CPCLGGMATGPCG QF+ AFSCF YS EPKGV+C E FK MQ
Sbjct: 127 EPSQGAYNPETGEINWDCPCLGGMATGPCGEQFKAAFSCFVYSEAEPKGVDCVELFKVMQ 186
Query: 91 DCMAQYPTLYKQND 104
DC ++P +Y + D
Sbjct: 187 DCFREHPEIYGEVD 200
>sp|Q4P8D2|MIA40_USTMA Mitochondrial intermembrane space import and assembly protein 40
OS=Ustilago maydis (strain 521 / FGSC 9021) GN=MIA40
PE=3 SV=1
Length = 247
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 51/67 (76%)
Query: 42 GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYK 101
G INW+CPCLGGMA GPCG QF+ AFSCF YS EPKG++C + FK MQDC ++P +YK
Sbjct: 143 GEINWDCPCLGGMAHGPCGEQFKLAFSCFVYSEAEPKGIDCVDKFKAMQDCFREHPDVYK 202
Query: 102 QNDDDDE 108
+DDE
Sbjct: 203 DEIEDDE 209
>sp|Q6CSA1|MIA40_KLULA Mitochondrial intermembrane space import and assembly protein 40
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=MIA40
PE=3 SV=1
Length = 406
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 50/68 (73%)
Query: 42 GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYK 101
G INW+CPCLGGMA GPCG +F+ AFSCF YS +PKG+NC E F TMQ+C +YP Y
Sbjct: 276 GEINWDCPCLGGMAYGPCGEEFKSAFSCFVYSEADPKGINCVEKFSTMQNCFRKYPDYYA 335
Query: 102 QNDDDDED 109
+ D+E+
Sbjct: 336 EQIKDEEE 343
>sp|P0C1D2|MIA40_EMENI Mitochondrial intermembrane space import and assembly protein 40
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=mia40 PE=3 SV=1
Length = 283
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 49/66 (74%)
Query: 42 GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYK 101
G INW+CPCLGGMA GPCG +FR AFSCF YS +EPKG++C + FK MQDC +P +Y
Sbjct: 146 GEINWDCPCLGGMAYGPCGEEFRAAFSCFVYSEEEPKGMDCIDKFKAMQDCFRAHPDVYG 205
Query: 102 QNDDDD 107
DDD
Sbjct: 206 AELDDD 211
>sp|Q6FW26|MIA40_CANGA Mitochondrial intermembrane space import and assembly protein 40
OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=MIA40 PE=3 SV=1
Length = 404
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 58/86 (67%), Gaps = 4/86 (4%)
Query: 34 QPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDC 92
Q PD G INW+CPCLGGMA GPCG +F+ AFSCF YS EPKG++C E F+ MQDC
Sbjct: 276 QESAYNPDTGEINWDCPCLGGMAHGPCGEEFKAAFSCFVYSEAEPKGIDCVEKFQHMQDC 335
Query: 93 MAQYPTLYKQ---NDDDDEDLDDVKD 115
+YP Y + + DDE++D K+
Sbjct: 336 FRRYPEHYAEQLADPADDENVDHEKN 361
>sp|Q7S3S2|MIA40_NEUCR Mitochondrial intermembrane space import and assembly protein 40
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=mia-40 PE=3 SV=1
Length = 298
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 49/66 (74%)
Query: 42 GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYK 101
G INW+CPCLGGMA GPCG +F+ AFSCF YST+EPKG++C E F MQDC +YP +Y
Sbjct: 185 GEINWDCPCLGGMAHGPCGEEFKAAFSCFVYSTEEPKGMDCIEKFSHMQDCFRKYPEVYG 244
Query: 102 QNDDDD 107
DD
Sbjct: 245 AELADD 250
>sp|Q4IK03|MIA40_GIBZE Mitochondrial intermembrane space import and assembly protein 40
OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=MIA40 PE=3 SV=2
Length = 368
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 34 QPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDC 92
Q G P+ G INW+CPCLGGMA GPCG +F+ AFSCF +S +EPKG++C + F+ MQ+C
Sbjct: 137 QQGAFNPETGEINWDCPCLGGMADGPCGEEFKTAFSCFVFSQEEPKGMDCIDKFQGMQEC 196
Query: 93 MAQYPTLYKQNDDDDED 109
+YP +Y DDED
Sbjct: 197 FKKYPDIYGAELADDED 213
>sp|Q6BSK8|MIA40_DEBHA Mitochondrial intermembrane space import and assembly protein 40
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=MIA40 PE=3 SV=1
Length = 249
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 58/79 (73%)
Query: 42 GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLYK 101
G INW+CPCLGGMA GPCG +F+EAF+CF YS EPKG+ C + F++M++C ++P YK
Sbjct: 140 GEINWDCPCLGGMAHGPCGEEFKEAFACFIYSESEPKGIECIKKFESMRNCFREHPEHYK 199
Query: 102 QNDDDDEDLDDVKDESIRK 120
+ DDE+ + + D + +K
Sbjct: 200 EELYDDEEQEPLVDVNEKK 218
>sp|O94030|MIA40_CANAL Mitochondrial intermembrane space import and assembly protein 40
OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=MIA40 PE=3 SV=2
Length = 252
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 34 QPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDC 92
Q PD G INW+CPCLGGMA GPCG +F+EAFSCF +S EPKG++C + F+ M+ C
Sbjct: 137 QEAAFNPDTGEINWDCPCLGGMAHGPCGEEFKEAFSCFVFSETEPKGIDCIKKFENMRSC 196
Query: 93 MAQYPTLYKQN--DDDDEDLDDVKDESIRKEAQEKADRIIEQA 133
+YP YK DD +E+ E + E E A IEQ
Sbjct: 197 FKRYPEHYKDELYDDGEEEASTEVVEHVVLETSEPAIEQIEQG 239
>sp|Q4WGL2|MIA40_ASPFU Mitochondrial intermembrane space import and assembly protein 40
OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 /
CBS 101355 / FGSC A1100) GN=mia40 PE=3 SV=1
Length = 297
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 48/59 (81%)
Query: 42 GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPTLY 100
G INW+CPCLGGMA GPCG +F+ AFSCF YST+EPKG++C + FK MQ+C +YP +Y
Sbjct: 146 GEINWDCPCLGGMAHGPCGEEFKAAFSCFVYSTEEPKGMDCIDKFKGMQECFRRYPDVY 204
>sp|Q757A5|MIA40_ASHGO Mitochondrial intermembrane space import and assembly protein 40
OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=MIA40 PE=3 SV=1
Length = 266
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 34 QPGLILPD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDC 92
Q G PD G INW+CPCLGGMA GPCG +F+ AF+CF YS EPKG++C E F+ MQDC
Sbjct: 172 QQGAYNPDTGEINWDCPCLGGMAHGPCGEEFKAAFACFVYSEAEPKGIDCVEKFQVMQDC 231
Query: 93 MAQYPTLYKQNDDDDED 109
Q+P Y + + +E
Sbjct: 232 FRQHPEHYAEQLESEEQ 248
>sp|P87059|MIA40_SCHPO Mitochondrial intermembrane space import and assembly protein 40
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mia40 PE=3 SV=1
Length = 313
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 40 PD-GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFKTMQDCMAQYPT 98
PD G INW+CPCLGGMA GPCG +F+ AFSCF YS EPKG+ C + F+ MQ C ++P
Sbjct: 190 PDTGEINWDCPCLGGMAHGPCGEEFKAAFSCFVYSKSEPKGMECLDKFQAMQACFQKHPE 249
Query: 99 LYKQNDDDDEDLDDVKDE 116
+Y+ + E+ D +E
Sbjct: 250 IYQDMVGESEEEDAETNE 267
>sp|Q2USJ2|MIA40_ASPOR Mitochondrial intermembrane space import and assembly protein 40
OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=mia40 PE=3 SV=1
Length = 187
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 38/46 (82%)
Query: 42 GSINWNCPCLGGMATGPCGVQFREAFSCFHYSTDEPKGVNCFEAFK 87
G INW+CPCLGGMA GPCG +F+ AFSCF YS +EPKG++C E FK
Sbjct: 140 GEINWDCPCLGGMAHGPCGEEFKAAFSCFVYSEEEPKGMDCIEKFK 185
>sp|P34415|YLZ2_CAEEL Uncharacterized protein F42H10.2 OS=Caenorhabditis elegans
GN=F42H10.2 PE=4 SV=1
Length = 115
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 31 PEPQPGLILPDGSINWNCPCLGGMATGPCGVQFREAFSCFHYSTD-EPKGVNCFEAFKTM 89
P PG DG IN+ C C+G + PCG +FREA +C ++D E + C + +
Sbjct: 38 PSNNPGPTTADGQINFECHCVGHLVGSPCGFEFREAITCQKTNSDGEIEQGACGKELMSF 97
Query: 90 QDCMAQ 95
+C+ +
Sbjct: 98 MECVTR 103
>sp|A4SG85|DNLJ_PROVI DNA ligase OS=Prosthecochloris vibrioformis (strain DSM 265)
GN=ligA PE=3 SV=1
Length = 674
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 7/43 (16%)
Query: 24 SSVELPPPEPQPG--LILPDGSINWNCPCLGGMATGPCGVQFR 64
S+ ELP P G L+ P+G ++W CP G CG Q R
Sbjct: 407 SAKELPTHCPDCGTPLVQPEGEVSWYCPNEEG-----CGAQIR 444
>sp|Q2GYV9|SSN3_CHAGB Serine/threonine-protein kinase SSN3 OS=Chaetomium globosum (strain
ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL
1970) GN=SSN3 PE=3 SV=1
Length = 512
Score = 29.6 bits (65), Expect = 6.7, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 6/36 (16%)
Query: 72 YSTDEPKGVNCFEAFKTMQDCMAQYPTLYKQNDDDD 107
+ST +P NCFE KT +YP DD+D
Sbjct: 455 FSTGDPVSANCFEGLKT------EYPHRRVSQDDND 484
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.134 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,082,715
Number of Sequences: 539616
Number of extensions: 2660139
Number of successful extensions: 12999
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 12715
Number of HSP's gapped (non-prelim): 262
length of query: 143
length of database: 191,569,459
effective HSP length: 106
effective length of query: 37
effective length of database: 134,370,163
effective search space: 4971696031
effective search space used: 4971696031
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)