Query psy135
Match_columns 418
No_of_seqs 294 out of 527
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 20:56:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy135.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/135hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2d8c_A Phosphatidylcholine:cer 99.8 6.5E-22 2.2E-26 165.0 4.0 82 4-88 13-94 (97)
2 1v85_A Similar to ring finger 99.7 6.6E-19 2.3E-23 145.0 2.7 73 5-78 14-88 (91)
3 3bs5_B Connector enhancer of k 99.7 2.8E-18 9.6E-23 137.5 3.7 73 5-80 1-75 (80)
4 3bs7_A Protein aveugle; sterIl 99.7 3.4E-18 1.1E-22 136.4 3.2 72 6-80 1-74 (78)
5 2e8o_A SAM domain and HD domai 99.7 6.6E-18 2.3E-22 142.0 4.0 71 5-78 24-96 (103)
6 2gle_A Neurabin-1; SAM domain, 99.7 2.9E-18 9.8E-23 135.4 1.7 71 6-79 2-72 (74)
7 3bq7_A Diacylglycerol kinase d 99.7 8.6E-18 3E-22 135.3 3.8 71 5-78 4-74 (81)
8 1kw4_A Polyhomeotic; SAM domai 99.7 1E-17 3.5E-22 137.5 4.2 70 5-78 11-82 (89)
9 2ean_A Connector enhancer of k 99.7 6.2E-18 2.1E-22 136.5 2.2 75 3-80 3-79 (83)
10 2f3n_A SH3 and multiple ankyri 99.7 1.1E-17 3.7E-22 133.2 3.3 68 8-78 2-69 (76)
11 3bs5_A Protein aveugle; sterIl 99.7 1.2E-17 4.1E-22 141.3 3.1 73 5-80 20-94 (106)
12 1wwv_A Connector enhancer of k 99.7 1.9E-17 6.6E-22 136.4 2.7 72 3-79 6-79 (91)
13 1pk1_B Sex COMB on midleg CG94 99.6 6.9E-17 2.4E-21 132.6 1.9 72 5-79 11-84 (89)
14 1uqv_A STE50 protein; SAM, ste 99.4 5.8E-14 2E-18 112.7 3.4 70 4-76 5-78 (85)
15 2kso_A Ephrin type-A receptor 99.4 1.3E-13 4.5E-18 111.3 2.1 69 7-78 10-79 (82)
16 2e8n_A Ephrin type-A receptor 99.3 7.5E-13 2.6E-17 108.0 3.6 70 6-78 4-75 (88)
17 2eam_A Putative 47 kDa protein 99.3 5.6E-13 1.9E-17 106.8 2.2 68 7-77 6-76 (80)
18 1ow5_A Serine/threonine-protei 99.3 2.6E-13 8.9E-18 109.2 0.1 64 14-80 16-80 (85)
19 2ke7_A Ankyrin repeat and ster 99.3 1.7E-13 5.7E-18 115.2 -1.3 69 6-77 15-86 (103)
20 2qkq_A Ephrin type-B receptor 99.3 2.2E-13 7.4E-18 110.0 -0.7 68 8-78 9-78 (83)
21 1ucv_A Ephrin type-A receptor 99.3 6.7E-13 2.3E-17 106.7 1.6 63 13-78 7-70 (81)
22 2eap_A Lymphocyte cytosolic pr 99.3 5.3E-13 1.8E-17 107.9 0.9 51 4-55 15-65 (90)
23 1b4f_A EPHB2; SAM domain, EPH 99.3 9.7E-13 3.3E-17 105.8 2.3 67 9-78 6-74 (82)
24 2kg5_A ARF-GAP, RHO-GAP domain 99.3 3.3E-13 1.1E-17 112.9 -0.7 68 8-78 21-89 (100)
25 3h8m_A Ephrin type-A receptor 99.3 1.2E-12 4.1E-17 107.5 2.3 67 9-78 21-88 (90)
26 2eao_A Ephrin type-B receptor 99.2 1.3E-12 4.5E-17 108.9 1.2 64 12-78 21-85 (99)
27 3k1r_B Usher syndrome type-1G 99.2 3.8E-12 1.3E-16 100.8 3.7 63 14-80 3-65 (74)
28 3tad_C Liprin-beta-1; protein 99.2 2.7E-12 9.3E-17 124.2 3.2 72 5-78 12-83 (265)
29 2k4p_A Phosphatidylinositol-3, 99.2 1.1E-12 3.9E-17 106.8 0.3 66 7-75 20-86 (86)
30 2dl0_A SAM and SH3 domain-cont 99.2 1E-12 3.6E-17 109.3 -0.0 72 4-78 14-86 (97)
31 1b0x_A Protein (EPHA4 receptor 99.2 3.2E-12 1.1E-16 105.6 1.6 65 11-78 24-89 (94)
32 3hil_A Ephrin type-A receptor 99.2 5E-12 1.7E-16 102.1 2.2 63 9-74 19-82 (82)
33 3kka_C Ephrin type-A receptor 99.2 3.6E-12 1.2E-16 103.8 1.0 65 11-78 19-84 (86)
34 1x40_A ARAP2; ASAP-related pro 99.2 1.2E-11 4.1E-16 101.6 3.8 63 13-78 15-78 (91)
35 2l5y_A Stromal interaction mol 99.1 5.9E-11 2E-15 105.7 4.0 61 6-68 76-140 (150)
36 2lmr_A ODIN, ankyrin repeat an 99.0 2.8E-11 9.4E-16 101.4 0.2 65 10-77 26-93 (101)
37 2k60_A Protein (stromal intera 99.0 1.3E-10 4.5E-15 103.4 3.6 61 6-68 76-140 (150)
38 2dkz_A Hypothetical protein LO 99.0 1.5E-10 5.1E-15 92.7 3.1 68 5-74 12-79 (84)
39 1v38_A SAM-domain protein sams 99.0 1.3E-10 4.3E-15 92.8 2.3 67 9-78 8-75 (78)
40 3sei_A Caskin-1; SAM domain, p 99.0 9.1E-11 3.1E-15 104.7 1.1 63 12-77 9-71 (149)
41 2kiv_A Ankyrin repeat and ster 98.9 1.2E-10 4.1E-15 103.6 0.1 63 12-77 13-78 (148)
42 3sei_A Caskin-1; SAM domain, p 98.9 4.1E-10 1.4E-14 100.4 2.4 65 10-77 76-141 (149)
43 3tac_B Liprin-alpha-2; transfe 98.8 1E-09 3.5E-14 108.4 3.9 72 5-78 33-106 (334)
44 3tad_C Liprin-beta-1; protein 98.7 6.4E-09 2.2E-13 100.7 3.8 69 7-78 86-154 (265)
45 2d3d_A VTS1 protein; RNA bindi 98.7 6.1E-09 2.1E-13 84.8 2.5 60 14-78 19-78 (88)
46 2es6_A VTS1P; SAM domain, prot 98.6 5.9E-09 2E-13 86.7 1.6 60 14-78 32-91 (101)
47 2kiv_A Ankyrin repeat and ster 98.6 6.3E-09 2.2E-13 92.4 1.3 61 10-73 85-147 (148)
48 2b6g_A VTS1P; alpha-helix, pen 98.5 1.6E-08 5.4E-13 86.7 1.6 61 13-78 49-109 (119)
49 2qar_B Telsam domain; polymer, 98.5 2.1E-08 7.2E-13 82.7 0.7 71 6-83 10-83 (93)
50 2y9u_A Tumor protein 63; apopt 98.4 9.7E-08 3.3E-12 74.5 3.2 62 15-79 6-67 (69)
51 2y9t_A Tumor protein 63; apopt 98.4 1.9E-07 6.4E-12 75.2 3.9 63 15-80 8-70 (82)
52 1oxj_A RNA-binding protein sma 98.2 5.6E-07 1.9E-11 81.4 2.4 59 14-78 8-66 (173)
53 1sv0_C Modulator of the activi 98.0 3.3E-06 1.1E-10 67.9 3.0 63 4-74 7-75 (82)
54 1ji7_A ETS-related protein TEL 98.0 1.1E-06 3.8E-11 71.8 0.1 68 5-78 9-78 (89)
55 3tac_B Liprin-alpha-2; transfe 97.8 9.9E-06 3.4E-10 80.2 3.7 66 11-78 160-226 (334)
56 1wwu_A Hypothetical protein FL 97.5 3.6E-05 1.2E-09 63.7 2.8 61 10-78 23-84 (99)
57 2e8m_A Epidermal growth factor 97.5 2.9E-05 1E-09 64.2 1.7 60 10-78 33-93 (99)
58 1x66_A Friend leukemia integra 97.2 8.8E-05 3E-09 61.5 1.7 66 6-78 22-92 (98)
59 1sxe_A Transcriptional regulat 97.2 0.00019 6.5E-09 59.4 3.2 65 6-77 25-94 (97)
60 1sv0_A ETS DNA-binding protein 97.1 0.00013 4.6E-09 58.9 1.5 66 5-78 7-76 (85)
61 2e8p_A ELF3 protein; cell-free 96.9 0.00032 1.1E-08 57.5 1.9 65 6-76 22-90 (92)
62 2dkx_A SAM pointed domain-cont 96.8 0.00031 1.1E-08 58.0 1.0 66 5-78 21-90 (96)
63 2ytu_A Friend leukemia integra 96.7 0.00032 1.1E-08 60.8 0.8 65 6-77 36-105 (128)
64 1sxd_A GA repeat binding prote 96.6 0.00033 1.1E-08 57.3 -0.2 64 6-78 21-88 (91)
65 2jv3_A ETS1 proto-oncogene; ET 96.4 0.00039 1.3E-08 58.8 -0.6 66 6-78 39-108 (110)
66 3idw_A Actin cytoskeleton-regu 95.6 0.0038 1.3E-07 48.6 1.7 52 19-74 8-64 (72)
67 2ipb_A PHON protein, class A n 95.3 0.025 8.7E-07 52.8 6.3 65 283-353 134-198 (230)
68 2qb0_B Telsam domain - lysozym 95.2 0.0041 1.4E-07 59.1 0.7 65 6-78 10-78 (241)
69 1dxs_A P53-like transcription 95.0 0.0099 3.4E-07 47.1 2.1 62 15-80 8-70 (80)
70 1d2t_A Acid phosphatase; all a 94.8 0.042 1.5E-06 51.4 6.4 67 282-354 145-211 (231)
71 2h80_A STAR-related lipid tran 90.6 0.071 2.4E-06 41.8 1.0 23 13-36 21-43 (81)
72 2dky_A RHO-GTPase-activating p 89.1 0.24 8.3E-06 39.6 3.0 23 13-36 23-45 (91)
73 1up8_A Vanadium-dependent brom 45.2 33 0.0011 36.5 6.5 67 283-351 483-572 (598)
74 2p2u_A HOST-nuclease inhibitor 42.0 7.5 0.00026 34.7 1.0 41 10-53 106-146 (171)
75 1qi9_A Protein (vanadium bromo 34.4 39 0.0013 35.7 5.1 29 322-350 476-504 (556)
76 2a2p_A Selenoprotein M, SELM p 30.7 24 0.00082 30.2 2.2 24 6-29 72-95 (129)
No 1
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2
Probab=99.84 E-value=6.5e-22 Score=164.97 Aligned_cols=82 Identities=28% Similarity=0.489 Sum_probs=77.3
Q ss_pred CccccCCCCHHHHHHHHHhcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHhhhccc
Q psy135 4 AENFVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEIHNDIR 83 (418)
Q Consensus 4 ~~~~v~~Ws~edV~~WL~~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~~~~~~ 83 (418)
...+|.+||+|||++||++.||++|++.| +| |||++||.||++||+++||||+++|+||||+++|++||+++..+++
T Consensus 13 ~~~~v~~Ws~edV~~WL~~~Gl~~Y~~~F--~~-IdG~~LL~Lt~~dLk~~~LgI~~~g~rkkl~~~I~~L~~~~~~~~~ 89 (97)
T 2d8c_A 13 TMKEVVYWSPKKVADWLLENAMPEYCEPL--EH-FTGQDLINLTQEDFKKPPLYRVSSDNGQRLLDMIETLKMEHHMEAH 89 (97)
T ss_dssp CCSCCSSCCTTHHHHHHHHTTCTTTTTTT--TT-CCHHHHHTCCHHHHHSSSSSSCSTTTTHHHHHHHHHHHHHSCCCCC
T ss_pred CCCchhhCCHHHHHHHHHHcCCHHHHHHH--Hc-CCCHHHhcCCHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 35789999999999999999999999888 57 9999999999999999889999999999999999999999999999
Q ss_pred ccCCC
Q psy135 84 DRGYD 88 (418)
Q Consensus 84 ~~g~~ 88 (418)
++|+.
T Consensus 90 ~~~~~ 94 (97)
T 2d8c_A 90 KNSGP 94 (97)
T ss_dssp CCCCC
T ss_pred hcCCC
Confidence 98885
No 2
>1v85_A Similar to ring finger protein 36; apoptosis, neuron, cell death, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=99.73 E-value=6.6e-19 Score=144.97 Aligned_cols=73 Identities=30% Similarity=0.493 Sum_probs=68.6
Q ss_pred ccccCCCCHHHHHHHHHhcCC--CchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 5 ENFVLDWTSEQVANWLTQKGH--GKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 5 ~~~v~~Ws~edV~~WL~~~G~--~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
.++|..||++||++||++.|+ ++|++.| ++|+|||+.|+.||++||+++||||.++|+|++|+++|++||+..
T Consensus 14 ~~~v~~Wt~~dV~~WL~~~gl~~~~Y~~~F-~~~~IdG~~Ll~Lt~~dL~~~~LGI~~~g~r~~il~~I~~Lr~~~ 88 (91)
T 1v85_A 14 HKAVDKWTTEEVVLWLEQLGPWASLYRDRF-LSERVNGRLLLTLTEEEFSRAPYTIENSSHRRVILTELERVRSGP 88 (91)
T ss_dssp HSCGGGCCHHHHHHHHHHHCGGGHHHHHHH-HHTTCCHHHHHHCCHHHHHSTTTCCCCHHHHHHHHHHHHHHHSCC
T ss_pred CCCcccCCHHHHHHHHHHcCCCHHHHHHHH-HHhCCCHHHHhcCCHHHHhccCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 368999999999999999999 9999998 799999999999999999977799999999999999999999754
No 3
>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens}
Probab=99.71 E-value=2.8e-18 Score=137.45 Aligned_cols=73 Identities=15% Similarity=0.368 Sum_probs=68.2
Q ss_pred ccccCCCCHHHHHHHHHhc--CCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHhhh
Q psy135 5 ENFVLDWTSEQVANWLTQK--GHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEIHN 80 (418)
Q Consensus 5 ~~~v~~Ws~edV~~WL~~~--G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~~~ 80 (418)
+++|.+||++||++||+.. |+++|++.| ++|+|||+.|+.||++||++ |||+++|+|++|+++|+.||..+..
T Consensus 1 ~~~v~~Ws~~~V~~WL~~l~~gl~~Y~~~F-~~~~i~G~~Ll~L~~~dL~~--lGI~~~ghr~~il~~I~~L~~~~~~ 75 (80)
T 3bs5_B 1 MEPVSKWSPSQVVDWMKGLDDCLQQYIKNF-EREKISGDQLLRITHQELED--LGVSRIGHQELILEAVDLLCALNYG 75 (80)
T ss_dssp -CCGGGCCHHHHHHHHHTSCGGGGGGHHHH-HHHTCCHHHHHTCCHHHHHH--TTCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred CCccccCCHHHHHHHHHHHhhhHHHHHHHH-HHcCCCHHHHHHCCHHHHHH--cCCCCHHHHHHHHHHHHHHHHhhhc
Confidence 4688999999999999988 699999999 79999999999999999999 9999999999999999999998754
No 4
>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster}
Probab=99.70 E-value=3.4e-18 Score=136.37 Aligned_cols=72 Identities=22% Similarity=0.395 Sum_probs=67.7
Q ss_pred cccCCCCHHHHHHHHHhc--CCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHhhh
Q psy135 6 NFVLDWTSEQVANWLTQK--GHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEIHN 80 (418)
Q Consensus 6 ~~v~~Ws~edV~~WL~~~--G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~~~ 80 (418)
++|.+||++||++||++. |+++|++.| ++|+|||+.|+.||++||++ |||+++|+|++|+++|++||.+.+.
T Consensus 1 k~v~~Wt~~~V~~WL~~~~~gl~~y~~~F-~~~~I~G~~Ll~L~~~dL~~--lGI~~~g~r~~il~~I~~Lr~~~~~ 74 (78)
T 3bs7_A 1 KAVYLWTVSDVLKWYRRHCGEYTQYEQLF-AQHDITGRALLRITDSSLQR--MGVTDNRDREAIWREIVKQRLKTDI 74 (78)
T ss_dssp CCGGGCCHHHHHHHHHHHSGGGGGGHHHH-HHTTCCHHHHTTCCHHHHHH--HTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhhCCHHHHHHHHHHHhcCHHHHHHHH-HHCCCCHHHHhhCCHHHHhH--cCCCCHHHHHHHHHHHHHHHhHHHH
Confidence 478999999999999995 999999999 79999999999999999999 9999999999999999999988643
No 5
>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=6.6e-18 Score=142.01 Aligned_cols=71 Identities=20% Similarity=0.339 Sum_probs=67.9
Q ss_pred ccccCCCCHHHHHHHHHhcCCCc--hHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 5 ENFVLDWTSEQVANWLTQKGHGK--YAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 5 ~~~v~~Ws~edV~~WL~~~G~~e--y~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
..++.+||++||++||++.|+++ |++.| ++|+|||+.|+.||++||++ |||+++|+|++|+++|++||+.+
T Consensus 24 ~~~v~~Ws~~~V~~WL~~lgl~~~~y~~~F-~~~~I~G~~Ll~Lt~~dLke--LGI~~~G~R~kil~~I~~Lr~~~ 96 (103)
T 2e8o_A 24 HPDYKTWGPEQVCSFLRRGGFEEPVLLKNI-RENEITGALLPCLDESRFEN--LGVSSLGERKKLLSYIQRLVQIH 96 (103)
T ss_dssp CSCGGGCHHHHHHHHHHHHTCCCHHHHHHH-HHTTCCTTTTTTCCHHHHHH--TTCCCHHHHHHHHHHHHHHHTTT
T ss_pred ccChhhCCHHHHHHHHHHcCCChHHHHHHH-HHcCCCHHHHHhCCHHHHHH--cCCCCHHHHHHHHHHHHHHHHhH
Confidence 46789999999999999999999 99998 89999999999999999999 99999999999999999999876
No 6
>2gle_A Neurabin-1; SAM domain, scaffold, protein protein interaction, protein binding; NMR {Rattus norvegicus}
Probab=99.69 E-value=2.9e-18 Score=135.44 Aligned_cols=71 Identities=20% Similarity=0.443 Sum_probs=67.4
Q ss_pred cccCCCCHHHHHHHHHhcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHhh
Q psy135 6 NFVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEIH 79 (418)
Q Consensus 6 ~~v~~Ws~edV~~WL~~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~~ 79 (418)
++|.+||++||++||++.|+++|++.| ++|+|||+.|+.||++||++ |||+++|+|++|+++|++||.+++
T Consensus 2 ~~v~~Ws~~~V~~WL~~~gl~~y~~~F-~~~~i~g~~Ll~l~~~dL~~--lGI~~~g~r~kil~~i~~L~~~~e 72 (74)
T 2gle_A 2 HMVHEWSVQQVSHWLVGLSLDQYVSEF-SAQNISGEQLLQLDGNKLKA--LGMTSSQDRALVKKKLKEMKMSLE 72 (74)
T ss_dssp CCGGGCCSGGGHHHHHHTTTHHHHHHH-TTTTCCHHHHHTCCHHHHHT--TTCCCHHHHHHHHHHHHSHHHHHH
T ss_pred CCcccCCHHHHHHHHHHCCCHHHHHHH-HHcCCCHHHHhhCCHHHHHH--cCCCCHHHHHHHHHHHHHHHHHhh
Confidence 468899999999999999999999988 79999999999999999999 999999999999999999998763
No 7
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens}
Probab=99.69 E-value=8.6e-18 Score=135.30 Aligned_cols=71 Identities=30% Similarity=0.603 Sum_probs=66.2
Q ss_pred ccccCCCCHHHHHHHHHhcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 5 ENFVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 5 ~~~v~~Ws~edV~~WL~~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
++++.+||++||++||++.|+++|++.| ++|+|||..|+.||++||++ |||+++|+|++|+++|++|+...
T Consensus 4 ~~~v~~Ws~~~V~~WL~~lgl~~Y~~~F-~~~~idg~~Ll~Lt~~dL~~--lGI~~~ghr~kIl~aI~~L~~~~ 74 (81)
T 3bq7_A 4 TRPVHLWGTEEVAAWLEHLSLCEYKDIF-TRHDIRGSGLLHLERRDLKD--LGVTKVGHMKRILCGIKELSRSS 74 (81)
T ss_dssp -CCGGGCCHHHHHHHHHHTTCGGGHHHH-HHTTCCHHHHTTCCHHHHHH--TTCCCHHHHHHHHHHHHHHHC--
T ss_pred CCChhhCCHHHHHHHHHHCCCHHHHHHH-HHcCCCHHHHCcCCHHHHhH--cCCCCHHHHHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999 79999999999999999999 99999999999999999999764
No 8
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A
Probab=99.69 E-value=1e-17 Score=137.52 Aligned_cols=70 Identities=26% Similarity=0.497 Sum_probs=63.6
Q ss_pred ccccCCCCHHHHHHHHHhc-CCCchHHHHhHhcCCCccccccCCcccc-CCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 5 ENFVLDWTSEQVANWLTQK-GHGKYAPLLCDQHRLDGRGLFLLHEEDL-KSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 5 ~~~v~~Ws~edV~~WL~~~-G~~ey~~~f~~~~~IdG~~LL~Lte~DL-k~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
..++.+||++||++||++. |+++|++.| ++|+|||++|+.||++|| ++ ||| ++|+|++|+++|++||+..
T Consensus 11 ~~~v~~Ws~edV~~wL~~l~gl~~y~~~F-~~~~IdG~~LL~Lt~~dL~k~--lgI-klG~r~kI~~~I~~L~~~~ 82 (89)
T 1kw4_A 11 RPPISSWSVDDVSNFIRELPGCQDYVDDF-IQQEIDGQALLRLKEKHLVNA--MGM-KLGPALKIVAKVESIKEVR 82 (89)
T ss_dssp CCCGGGCCHHHHHHHHHTSTTCGGGHHHH-HHTTCCHHHHHHCCHHHHHTT--TCC-CHHHHHHHHHHHHHHC---
T ss_pred CCCchhCCHHHHHHHHHHCcChHHHHHHH-HHhCccHHHHhcCCHHHHHHH--cCC-CHHHHHHHHHHHHHHHHHh
Confidence 4579999999999999999 999999988 899999999999999999 66 999 7999999999999998765
No 9
>2ean_A Connector enhancer of kinase suppressor of RAS 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=6.2e-18 Score=136.52 Aligned_cols=75 Identities=15% Similarity=0.376 Sum_probs=70.0
Q ss_pred CCccccCCCCHHHHHHHHHhc--CCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHhhh
Q psy135 3 NAENFVLDWTSEQVANWLTQK--GHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEIHN 80 (418)
Q Consensus 3 ~~~~~v~~Ws~edV~~WL~~~--G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~~~ 80 (418)
+++++|.+||++||++||+.. |+++|++.| ++|+|||+.|+.||++||++ |||.++|||++|+++|+.||..+..
T Consensus 3 ~~~~~v~~Wt~~~V~~WL~~l~~gl~~Y~~~F-~~~~I~G~~Ll~Lt~~dL~~--LGI~~~ghr~~il~~I~~L~~~~~~ 79 (83)
T 2ean_A 3 SGSSGVSKWSPSQVVDWMKGLDDCLQQYIKNF-EREKISGDQLLRITHQELED--LGVSRIGHQELILEAVDLLCALNSG 79 (83)
T ss_dssp SSCCSGGGCCTTHHHHHHTTSCGGGTTTHHHH-HHHTCCHHHHTTCCHHHHHH--HTCCCSHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCccccCCHHHHHHHHHHHHhhHHHHHHHH-HHCCCCHHHHhhCCHHHHHH--hCCCCHHHHHHHHHHHHHHHHHhhc
Confidence 456789999999999999988 699999999 79999999999999999999 9999999999999999999988743
No 10
>2f3n_A SH3 and multiple ankyrin repeat domains 3; postsynaptic density, SAM domain, shank, scaffolding protein, structural protein; 2.10A {Rattus norvegicus} SCOP: a.60.1.2 PDB: 2f44_A
Probab=99.68 E-value=1.1e-17 Score=133.18 Aligned_cols=68 Identities=19% Similarity=0.386 Sum_probs=62.2
Q ss_pred cCCCCHHHHHHHHHhcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 8 VLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 8 v~~Ws~edV~~WL~~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
|.+||++||++||++.|+++|++.| ++|+|||..|+.||++||++ |||+++|+|++|+++|++||...
T Consensus 2 v~~Ws~~~V~~WL~~lgl~~Y~~~F-~~~~idg~~Ll~Lt~~dL~~--lGI~~~Ghr~kIl~aI~~l~~~~ 69 (76)
T 2f3n_A 2 LQLWSKFDVGDWLESIHLGEHRDRF-EDHEIEGAHLPALTKEDFVE--LGVTRVGHRENIERALRQLDGSR 69 (76)
T ss_dssp GGGCCHHHHHHHHHHTTCGGGHHHH-HHTTCCGGGGGGCCHHHHHH--TTCCCHHHHHHHHHHHHTC----
T ss_pred hhhCCHHHHHHHHHHCCCHHHHHHH-HHcCCCHHHHccCCHHHHHH--cCCCChhHHHHHHHHHHHHHHHH
Confidence 6789999999999999999999998 79999999999999999988 99999999999999999998764
No 11
>3bs5_A Protein aveugle; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Drosophila melanogaster}
Probab=99.67 E-value=1.2e-17 Score=141.29 Aligned_cols=73 Identities=22% Similarity=0.387 Sum_probs=68.7
Q ss_pred ccccCCCCHHHHHHHHHhc--CCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHhhh
Q psy135 5 ENFVLDWTSEQVANWLTQK--GHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEIHN 80 (418)
Q Consensus 5 ~~~v~~Ws~edV~~WL~~~--G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~~~ 80 (418)
..++.+||++||++||++. |+++|++.| ++|+|||+.|+.||++||++ |||+++|||++|+++|++||.+...
T Consensus 20 ~~~v~~Wt~~~V~~WL~~~~~gl~~Y~~~F-~~~~I~G~~Ll~Lt~~dLk~--LGI~~~GhR~kIl~~I~~Lr~~~~~ 94 (106)
T 3bs5_A 20 PKAVYLWTVSDVLKWYRRHCGEYTQYEQLF-AQHDITGRALLRITDSSLQR--MGVTDNRDREAIWREIVKQRLKTDI 94 (106)
T ss_dssp CCCGGGCCHHHHHHHHHHHSGGGGGGHHHH-HHTTCCHHHHTTCCHHHHHH--HTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHHcchHHHHHHH-HHcCccHHHHhhCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHhhh
Confidence 4679999999999999999 999999999 89999999999999999998 9999999999999999999987643
No 12
>1wwv_A Connector enhancer of kinase suppressor of RAS 1; structural genomics, protein regulation, transcription; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=99.66 E-value=1.9e-17 Score=136.42 Aligned_cols=72 Identities=24% Similarity=0.465 Sum_probs=66.4
Q ss_pred CCccccCCCCHHHHHHHHH--hcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHhh
Q psy135 3 NAENFVLDWTSEQVANWLT--QKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEIH 79 (418)
Q Consensus 3 ~~~~~v~~Ws~edV~~WL~--~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~~ 79 (418)
+.+++|..||++||++||+ +.|+.+| .| ++|+|+|+.|+.||++||++ |||+++|||++|+++|++||+++.
T Consensus 6 ~~~~~v~~Wt~~~V~~WL~~l~~~l~~Y--~F-~~~~I~G~~LL~Lt~~dL~~--LGI~~~Ghr~~Il~~I~~L~~~~~ 79 (91)
T 1wwv_A 6 SGMEPVETWTPGKVATWLRGLDDSLQDY--PF-EDWQLPGKNLLQLCPQSLEA--LAVRSLGHQELILGGVEQLQALSS 79 (91)
T ss_dssp CSCCCTTTCCTTTHHHHHHHHCHHHHTS--CH-HHHCCCHHHHTTCCTTTGGG--GTCCCHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCccccCCHHHHHHHHHhcCCccccc--cH-HhcCccHHHHhhCCHHHHHH--cCCCcHhHHHHHHHHHHHHHHHhh
Confidence 3467899999999999999 5589999 56 79999999999999999999 999999999999999999998873
No 13
>1pk1_B Sex COMB on midleg CG9495-PA; hetero SAM domain, polymers, transcriptional repression, transcription repression; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk3_A
Probab=99.62 E-value=6.9e-17 Score=132.56 Aligned_cols=72 Identities=22% Similarity=0.416 Sum_probs=63.1
Q ss_pred ccccCCCCHHHHHHHHHhc--CCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHhh
Q psy135 5 ENFVLDWTSEQVANWLTQK--GHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEIH 79 (418)
Q Consensus 5 ~~~v~~Ws~edV~~WL~~~--G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~~ 79 (418)
..++.+||+|||++||++. |+++|++.| ++|+|||++||.||++||.+. ||+ ++|+++||+.+|++||...+
T Consensus 11 ~~~v~~WsvedV~~wl~~~~~g~~~y~~~F-~~~eIDG~aLL~Lt~~dl~~~-mgi-klGpalKi~~~I~~lk~~~~ 84 (89)
T 1pk1_B 11 RSQPIDWTIEEVIQYIESNDNSLAVHGDLF-RKHEIDGKALLRLNSERMMKY-MGL-KLGPALKICNLVNKVNGRDH 84 (89)
T ss_dssp CCCGGGCCHHHHHHHHHHHCGGGGGGHHHH-HHTTCCHHHHHTCCHHHHHHH-SCC-CHHHHHHHHHHHHHHC----
T ss_pred CCCchhCCHHHHHHHHHHHccchHHHHHHH-HHcCcChHHHhcCCHHHHHHc-cCC-CccHHHHHHHHHHHHHcccc
Confidence 3578899999999999987 899999988 899999999999999999765 998 59999999999999997653
No 14
>1uqv_A STE50 protein; SAM, sterIle alpha motif, helical, protein-protein interaction domain, growth arrest, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.60.1.2 PDB: 1z1v_A
Probab=99.42 E-value=5.8e-14 Score=112.73 Aligned_cols=70 Identities=14% Similarity=0.195 Sum_probs=63.7
Q ss_pred CccccCCCCHHHHHHHH-HhcCCCc---hHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHH
Q psy135 4 AENFVLDWTSEQVANWL-TQKGHGK---YAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKK 76 (418)
Q Consensus 4 ~~~~v~~Ws~edV~~WL-~~~G~~e---y~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~ 76 (418)
++.++.+||++||+.|+ .+.|+++ .++.| ++|+|+|.+|+.|+.+|+|+ |++.++|.|.||+..|.+||+
T Consensus 5 ~~~~v~~Wt~~~V~~W~~~~lg~~d~d~~~~~f-~~ndItG~vL~eL~leDlKE--L~i~s~~~r~~lk~~In~Lr~ 78 (85)
T 1uqv_A 5 NNEDFSQWSVDDVITWCISTLEVEETDPLCQRL-RENDIVGDLLPELCLQDCQD--LCDGDLNKAIKFKILINKMRD 78 (85)
T ss_dssp SCCCTTTCCHHHHHHHHHHHHSSCTTSTHHHHH-HHSCCCGGGHHHHHHHHHHH--TSSSCHHHHHHHHHHHHHHHH
T ss_pred cccccccCCHHHHHHHHHHHhCCCCccHHHHHH-HHcCCchhhHHHcCHHHHHH--hCchHHHHHHHHHHHHHHHHH
Confidence 35689999999999999 6779977 56666 89999999999999999999 999999999999999999984
No 15
>2kso_A Ephrin type-A receptor 2; SAM domain, heterodimer, cell signaling, angiogenesis, apopt ATP-binding, cataract; NMR {Homo sapiens}
Probab=99.36 E-value=1.3e-13 Score=111.28 Aligned_cols=69 Identities=20% Similarity=0.370 Sum_probs=58.8
Q ss_pred ccCCCCHHHHHHHHHhcCCCchHHHHhHhcCCC-ccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 7 FVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLD-GRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 7 ~v~~Ws~edV~~WL~~~G~~ey~~~f~~~~~Id-G~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
-+..|+.++|++||++.|+++|.+.| .+|+|| ++.|+.||++||++ +||.+.|+||||+.+|+.||.+.
T Consensus 10 ~~~~~~~~~V~~WL~~lgL~qY~~~F-~~~gid~~~~L~~lt~~DL~~--lGI~~~GhRkkIl~ai~~Lr~~~ 79 (82)
T 2kso_A 10 LVPRGSHMTVSEWLESIKMQQYTEHF-MAAGYTAIEKVVQMTNDDIKR--IGVRLPGHQKRIAYSLLGLKDQV 79 (82)
T ss_dssp --------CHHHHHHHTTCTTHHHHH-HHTTCCSHHHHTTCCHHHHHH--HHCCCTTHHHHHHHHHHHHHHHT
T ss_pred CCCCCCcchHHHHHHHCCCHHHHHHH-HHcCCChHHHHHhCCHHHHHH--CCCCChhHHHHHHHHHHHHHHHH
Confidence 35679999999999999999999999 799999 89999999999999 99999999999999999999875
No 16
>2e8n_A Ephrin type-A receptor 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=7.5e-13 Score=108.04 Aligned_cols=70 Identities=19% Similarity=0.314 Sum_probs=63.4
Q ss_pred cccCCCC-HHHHHHHHHhcCCCchHHHHhHhcCCC-ccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 6 NFVLDWT-SEQVANWLTQKGHGKYAPLLCDQHRLD-GRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 6 ~~v~~Ws-~edV~~WL~~~G~~ey~~~f~~~~~Id-G~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
.+..+++ .++|++||+..|+++|.+.| .+|+|| ++.|+.||++||++ +||.+.||||||+++|++||.+.
T Consensus 4 ~~~p~~~~~~~V~~WL~~lgL~~Y~~~F-~~~~~~~~~~l~~lt~~dL~~--lGI~~~GhRkkIl~ai~~l~~~~ 75 (88)
T 2e8n_A 4 GSSGEGVPFRTVSEWLESIKMQQYTEHF-MAAGYTAIEKVVQMTNDDVKR--IGVRLPGHQKRIAYSLLGLKDQV 75 (88)
T ss_dssp SCCCCCCSCSSHHHHHHHTTCGGGHHHH-HHHTCSSHHHHTTSCTTHHHH--TTCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCchhhHHHHHHHCCCHHHHHHH-HHcCCChHHHHHhCCHHHHHH--CCCCChhHHHHHHHHHHHHHHhh
Confidence 3444554 58999999999999999999 799999 89999999999999 99999999999999999999875
No 17
>2eam_A Putative 47 kDa protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=5.6e-13 Score=106.85 Aligned_cols=68 Identities=22% Similarity=0.330 Sum_probs=62.0
Q ss_pred ccCCCCHHHHHHHHHhcCCCchHHHHhHhcCCCccccc---cCCccccCCCCCCccccchHHHHHHHHHHHHHH
Q psy135 7 FVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLF---LLHEEDLKSPPISIEILGDIKRIIYDIESFKKE 77 (418)
Q Consensus 7 ~v~~Ws~edV~~WL~~~G~~ey~~~f~~~~~IdG~~LL---~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~ 77 (418)
+-..++.++|++||+..|+++|.+.| .+|+|||..++ .||++||++ +||.+.|||+||+++|++||..
T Consensus 6 ~~~~~~~~~V~~WL~~lgL~~Y~~~F-~~~~i~~~~~l~~~~lt~~dL~~--lGI~~~ghR~kIl~ai~~L~~~ 76 (80)
T 2eam_A 6 SGPRCPVQTVGQWLESIGLPQYENHL-MANGFDNVQFMGSNVMEDQDLLE--IGILNSGHRQRILQAIQLLPSG 76 (80)
T ss_dssp SCCCCCCCCHHHHHHHHTCGGGHHHH-HHTTCCCTTTSSSSSSCTTHHHH--SSCCCHHHHHHHHHHHHHSCCC
T ss_pred CCCCCChhHHHHHHHHCCCHHHHHHH-HHcCCChHHHHhhccCCHHHHHH--CCCCCHHHHHHHHHHHHHHhcC
Confidence 33467889999999999999999999 79999999876 999999999 9999999999999999999854
No 18
>1ow5_A Serine/threonine-protein kinase STE11; MAP kinase, MAPKKK, SAM domain, pointed domain, SCM domain, STE50 regulator, transferase; NMR {Saccharomyces cerevisiae} SCOP: a.60.1.2 PDB: 1x9x_A
Probab=99.29 E-value=2.6e-13 Score=109.18 Aligned_cols=64 Identities=20% Similarity=0.284 Sum_probs=57.5
Q ss_pred HHHHHHHHhcCCCchHHHHhHhcCCCc-cccccCCccccCCCCCCccccchHHHHHHHHHHHHHHhhh
Q psy135 14 EQVANWLTQKGHGKYAPLLCDQHRLDG-RGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEIHN 80 (418)
Q Consensus 14 edV~~WL~~~G~~ey~~~f~~~~~IdG-~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~~~ 80 (418)
++|++||++.|+++|++.| .+|+|+| +.|+.|+.++|++ |||+++|||.||+++++.||++..+
T Consensus 16 ~~v~~wL~si~c~qY~~~F-~eN~I~g~d~L~eLd~e~LkE--lGI~kvGdRirIlk~vk~Lr~~~~a 80 (85)
T 1ow5_A 16 PFVQLFLEEIGCTQYLDSF-IQCNLVTEEEIKYLDKDILIA--LGVNKIGDRLKILRKSKSFQRDKRI 80 (85)
T ss_dssp CHHHHHHHHHSCTHHHHHH-HHHTCCCHHHHHHCCHHHHHH--HTCCCHHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHcCChhHHHHH-HHcCCCcHHHHHHcCHHHHHH--hCCCcccHHHHHHHHHHHHHHHHhc
Confidence 3999999999999999999 7999999 9999999999999 9999999999999999999987643
No 19
>2ke7_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, alternative splicing, ANK repeat, cell junction, cell membrane; NMR {Homo sapiens}
Probab=99.29 E-value=1.7e-13 Score=115.17 Aligned_cols=69 Identities=23% Similarity=0.322 Sum_probs=57.6
Q ss_pred cccCCCCHHHHHHHHHhcCCCchHHHHhHhcCCCccccc---cCCccccCCCCCCccccchHHHHHHHHHHHHHH
Q psy135 6 NFVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLF---LLHEEDLKSPPISIEILGDIKRIIYDIESFKKE 77 (418)
Q Consensus 6 ~~v~~Ws~edV~~WL~~~G~~ey~~~f~~~~~IdG~~LL---~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~ 77 (418)
..+..|+.++|++||++.|+++|.+.| .+|+|||..++ .||++||++ +||++.|||+||+++|++||+.
T Consensus 15 ~~~~~w~~~~V~~WL~~igL~qY~~~F-~~~gid~~~~l~~~~lt~~DL~~--lGI~~~GhRkkIl~ai~~L~~~ 86 (103)
T 2ke7_A 15 MNGPRCPVQTVGQWLESIGLPQYENHL-MANGFDNVQFMGSNVMEDQDLLE--IGILNSGHRQRILQAIQLLPKM 86 (103)
T ss_dssp --------CCTTHHHHHTTCTTCHHHH-HHTTCCCHHHHHTTCCCHHHHHH--HTCCCHHHHHHHHHHHHHSCC-
T ss_pred ccccCCCHhHHHHHHHHCCCHHHHHHH-HHcCCCcHHHHhcccCCHHHHhH--CCCCCHHHHHHHHHHHHHHHhc
Confidence 457899999999999999999999999 79999999876 999999999 9999999999999999999753
No 20
>2qkq_A Ephrin type-B receptor 4; ATP-binding, glycoprotein, kinase, membrane, nucleotide- binding, phosphorylation, repeat, signal, transferase; 2.10A {Homo sapiens}
Probab=99.29 E-value=2.2e-13 Score=109.98 Aligned_cols=68 Identities=19% Similarity=0.313 Sum_probs=57.0
Q ss_pred cCCCC-HHHHHHHHHhcCCCchHHHHhHhcC-CCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 8 VLDWT-SEQVANWLTQKGHGKYAPLLCDQHR-LDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 8 v~~Ws-~edV~~WL~~~G~~ey~~~f~~~~~-IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
+.+|+ .++|++||++.|+++|.+.| .+|+ |||+.|+.||++||++ +||.+.||||||+++|++||.+.
T Consensus 9 ~p~~~~~~~V~~WL~~lgL~~Y~~~F-~~~~~~~~~~l~~lt~~dL~~--lGI~~~GhrkkIl~ai~~l~~~~ 78 (83)
T 2qkq_A 9 QPHYSAFGSVGEWLRAIKMGRYEESF-AAAGFGSFELVSQISAEDLLR--IGVTLAGHQKKILASVQHMKSQA 78 (83)
T ss_dssp -----CCSSHHHHHHHTTCGGGHHHH-HHTTCCSHHHHTTCCHHHHHH--HTCCCHHHHHHHHHHHTTC----
T ss_pred CCCCCccchHHHHHHHCCCHHHHHHH-HHcCCCcHHHHhhCCHHHHHH--CCCCCHHHHHHHHHHHHHHHHHh
Confidence 44555 58999999999999999999 6888 9999999999999999 99999999999999999999765
No 21
>1ucv_A Ephrin type-A receptor 8; receptor oligomerization, developmental regulation, tyrosine kinase, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=99.27 E-value=6.7e-13 Score=106.74 Aligned_cols=63 Identities=17% Similarity=0.438 Sum_probs=59.8
Q ss_pred HHHHHHHHHhcCCCchHHHHhHhcCCC-ccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 13 SEQVANWLTQKGHGKYAPLLCDQHRLD-GRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 13 ~edV~~WL~~~G~~ey~~~f~~~~~Id-G~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
.++|++||+..|+++|.+.| .+|+|| ++.|+.||++||++ +||.+.||||||+++|++||.+.
T Consensus 7 ~~~V~~WL~~lgL~~Y~~~F-~~~~~d~~~~l~~lt~~DL~~--lGI~~~GhrkkIl~ai~~l~~~~ 70 (81)
T 1ucv_A 7 GLTVGDWLDSIRMGRYRDHF-AAGGYSSLGMVLRMNAQDVRA--LGITLMGHQKKILGSIQTMRAQL 70 (81)
T ss_dssp CSBHHHHHHHTTCGGGHHHH-HHTTCCBHHHHTTCCHHHHHH--HTCCCHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHCCCHHHHHHH-HHcCCChHHHHHHcCHHHHHh--CCCCChhHHHHHHHHHHHHHHHH
Confidence 56899999999999999999 799999 79999999999999 99999999999999999999876
No 22
>2eap_A Lymphocyte cytosolic protein 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=5.3e-13 Score=107.85 Aligned_cols=51 Identities=20% Similarity=0.402 Sum_probs=47.9
Q ss_pred CccccCCCCHHHHHHHHHhcCCCchHHHHhHhcCCCccccccCCccccCCCC
Q psy135 4 AENFVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPP 55 (418)
Q Consensus 4 ~~~~v~~Ws~edV~~WL~~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~p 55 (418)
++.+|..||+++|++||+++||.+ ++.++++|+|||++||.|||+||+++|
T Consensus 15 s~seV~~Wsp~~VadWLkk~g~~~-cd~lv~Kh~IDG~~lL~LtE~Dlrk~P 65 (90)
T 2eap_A 15 FRSEVLGWDPDSLADYFKKLNYKD-CEKAVKKYHIDGARFLNLTENDIQKFP 65 (90)
T ss_dssp CHHHHTTCCTTTHHHHHHHTTCHH-HHHHHHHTTCCHHHHHTCCHHHHTTSC
T ss_pred cCccccccCHHHHHHHHHHcCCch-HHHHHHHhccCchhhhcccHHHhccCC
Confidence 457899999999999999999999 999988999999999999999999975
No 23
>1b4f_A EPHB2; SAM domain, EPH receptor, signal transduction, oligomer; 1.95A {Homo sapiens} SCOP: a.60.1.2 PDB: 1f0m_A 1sgg_A
Probab=99.27 E-value=9.7e-13 Score=105.84 Aligned_cols=67 Identities=18% Similarity=0.370 Sum_probs=61.4
Q ss_pred CCC-CHHHHHHHHHhcCCCchHHHHhHhcCC-CccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 9 LDW-TSEQVANWLTQKGHGKYAPLLCDQHRL-DGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 9 ~~W-s~edV~~WL~~~G~~ey~~~f~~~~~I-dG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
.+| +.++|++||++.|+++|.+.| .+|+| |++.|+.||++||++ +||.+.||||||+.+|++||.+.
T Consensus 6 p~~~~~~~v~~WL~~lgL~~Y~~~F-~~~~~~~~~~l~~lt~~dL~~--lGI~~~GhrkkIl~ai~~l~~~~ 74 (82)
T 1b4f_A 6 PDYTSFNTVDEWLEAIKMGQYKESF-ANAGFTSFDVVSQMMMEDILR--VGVTLAGHQKKILNSIQVMRAQM 74 (82)
T ss_dssp CCCCCCSSHHHHHHHTTCGGGHHHH-HHTTCCSHHHHTTCCHHHHHH--TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccHHHHHHHHCCCHHHHHHH-HHcCCCCHHHHHhCCHHHHHH--cCCCCHHHHHHHHHHHHHHHHHH
Confidence 344 457999999999999999999 78999 789999999999999 99999999999999999999776
No 24
>2kg5_A ARF-GAP, RHO-GAP domain, ANK repeat and PH domain-containing protein 3; SAM domain, helix bundle, cell membrane, cell projection, cytoplasm; NMR {Homo sapiens}
Probab=99.26 E-value=3.3e-13 Score=112.93 Aligned_cols=68 Identities=25% Similarity=0.293 Sum_probs=63.1
Q ss_pred cCCCCHHHHHHHHHhcCCCchHHHHhHhcCCC-ccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 8 VLDWTSEQVANWLTQKGHGKYAPLLCDQHRLD-GRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 8 v~~Ws~edV~~WL~~~G~~ey~~~f~~~~~Id-G~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
-..++.++|++||++.|+++|.+.| .+|+|| |+.|+.||++||++ |||.++|+||||+++|++||.+.
T Consensus 21 m~~~~~~~V~~WL~~lgL~qY~~~F-~~~gid~~~~L~~Lt~eDLke--LGIt~~GhRkkIL~aI~~Lr~~~ 89 (100)
T 2kg5_A 21 MAAPQDLDIAVWLATVHLEQYADTF-RRHGLATAGAARGLGHEELKQ--LGISATGHRKRILRLLQTGTEEG 89 (100)
T ss_dssp CSCCTTCBHHHHHGGGTCGGGHHHH-HHTTCCBHHHHTTCCHHHHHH--HTCCCHHHHHHHHHHHTTTTTCC
T ss_pred cCCCCcChHHHHHHHCCCHHHHHHH-HHcCCChHHHHHhcCHHHHHH--CCCCChhHHHHHHHHHHHHHhcc
Confidence 4556788999999999999999999 799999 89999999999999 99999999999999999998653
No 25
>3h8m_A Ephrin type-A receptor 7; SAM domain, kinase,structural genomics, structural genomics consortium, SGC, alternative splicing, ATP-binding; 2.10A {Homo sapiens}
Probab=99.26 E-value=1.2e-12 Score=107.53 Aligned_cols=67 Identities=19% Similarity=0.293 Sum_probs=63.1
Q ss_pred CCCCHHHHHHHHHhcCCCchHHHHhHhcCCC-ccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 9 LDWTSEQVANWLTQKGHGKYAPLLCDQHRLD-GRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 9 ~~Ws~edV~~WL~~~G~~ey~~~f~~~~~Id-G~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
..|+.++|++||+..|+++|.+.| .+++|| ++.|..+|++||++ +||.+.|+||||+.+|++||.+.
T Consensus 21 ~~~~~~~V~~WL~~lgL~qY~~~F-~~~g~d~~e~l~~lt~~DL~~--lGIt~~GHRkkIL~ai~~Lr~qm 88 (90)
T 3h8m_A 21 DFTTFCSVGEWLQAIKMERYKDNF-TAAGYNSLESVARMTIEDVMS--LGITLVGHQKKIMSSIQTMRAQM 88 (90)
T ss_dssp CCCCCSSHHHHHHHTTCGGGHHHH-HHTTCCSHHHHHTCCHHHHHH--TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCcchhHHHHHHHHCChHHHHHHH-HHcCCChHHHHhhCCHHHHHH--CCCCCHHHHHHHHHHHHHHHHHh
Confidence 568889999999999999999999 799999 89999999999999 99999999999999999999764
No 26
>2eao_A Ephrin type-B receptor 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=1.3e-12 Score=108.90 Aligned_cols=64 Identities=23% Similarity=0.334 Sum_probs=60.8
Q ss_pred CHHHHHHHHHhcCCCchHHHHhHhcCCC-ccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 12 TSEQVANWLTQKGHGKYAPLLCDQHRLD-GRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 12 s~edV~~WL~~~G~~ey~~~f~~~~~Id-G~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
+.++|++||+..|+++|.+.| .+|+|| ++.|+.||++||++ |||.+.||||||+++|++||.+.
T Consensus 21 ~~~~V~~WL~~lgL~~Y~~~F-~~~~~~~~~~L~~lt~~DL~~--lGI~~~GhRkkIl~ai~~l~~~~ 85 (99)
T 2eao_A 21 AFTTVDDWLSAIKMVQYRDSF-LTAGFTSLQLVTQMTSEDLLR--IGITLAGHQKKILNSIHSMRVQI 85 (99)
T ss_dssp SCCBHHHHHHTTTCGGGHHHH-HHHTCCBHHHHTTCCHHHHHH--HTCCCHHHHHHHHHHHHHHHHHS
T ss_pred chHHHHHHHHHCCcHHHHHHH-HHcCCChHHHHhhCCHHHHHH--CCCCChhHHHHHHHHHHHHHHHh
Confidence 568999999999999999999 799999 89999999999999 99999999999999999999876
No 27
>3k1r_B Usher syndrome type-1G protein; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens}
Probab=99.23 E-value=3.8e-12 Score=100.81 Aligned_cols=63 Identities=25% Similarity=0.438 Sum_probs=59.0
Q ss_pred HHHHHHHHhcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHhhh
Q psy135 14 EQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEIHN 80 (418)
Q Consensus 14 edV~~WL~~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~~~ 80 (418)
..|.+||++.|+++|.+.| .+|+||++.|+.||++||++ |||. +|+||||+++|+++|++...
T Consensus 3 ~~v~~wL~~lgL~~Y~~~F-~~~~id~e~l~~lt~~DL~~--lGI~-~G~RkkIl~ai~~~~~~~~~ 65 (74)
T 3k1r_B 3 SPLETFLASLHMEDFAALL-RQEKIDLEALMLCSDLDLRS--ISVP-LGPREKILGAVRRRRQAMER 65 (74)
T ss_dssp CHHHHHHHTTTCGGGHHHH-HHTTCCHHHHTTCCHHHHHH--TTCC-HHHHHHHHHHHHHHHHHHHS
T ss_pred chHHHHHHHCCCHHHHHHH-HHcCcCHHHHhHCCHHHHHH--cCCC-cchHHHHHHHHHHHHHHhcC
Confidence 4699999999999999999 78999999999999999999 9999 99999999999999987644
No 28
>3tad_C Liprin-beta-1; protein binding; 2.90A {Mus musculus}
Probab=99.22 E-value=2.7e-12 Score=124.24 Aligned_cols=72 Identities=24% Similarity=0.438 Sum_probs=66.0
Q ss_pred ccccCCCCHHHHHHHHHhcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 5 ENFVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 5 ~~~v~~Ws~edV~~WL~~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
..++.+|+.++|+.||++.|+++|++.| ++|.+||..|+.||++||+++ |||++.+|||||+.+|++|+...
T Consensus 12 ~~p~~~W~~e~V~~WLe~~GL~~Y~~~f-~~n~~dG~~Ll~lt~~dLe~e-LGI~nplHRkKL~laI~el~~~~ 83 (265)
T 3tad_C 12 DMPFAKWTKEQVCSWLAEQGLGSYLSSG-KHWIISGQTLLQASQQDLEKE-LGIKHSLHRKKLQLALQALGSEE 83 (265)
T ss_dssp --CGGGSCHHHHHHHHHHTTCCTTHHHH-TTTCSCSHHHHHSCHHHHHHH-TCCCSHHHHHHHHHHHHHHHHCS
T ss_pred CCChhhCChHHHHHHHHHHCHHHHHHHH-HHhCCchHHHHhCCHHHHHHH-hCCCCHHHHHHHHHHHHHhcccc
Confidence 4678999999999999999999999988 899999999999999999744 99999999999999999999753
No 29
>2k4p_A Phosphatidylinositol-3,4,5-trisphosphate 5- phosphatase 2; helix bundle, signaling protein, actin-binding, alternative splicing, cell adhesion; NMR {Homo sapiens} PDB: 2kso_B
Probab=99.22 E-value=1.1e-12 Score=106.78 Aligned_cols=66 Identities=18% Similarity=0.237 Sum_probs=60.4
Q ss_pred ccCCCCHHHHHHHHHhcCCCchHHHHhHhcCCCc-cccccCCccccCCCCCCccccchHHHHHHHHHHHH
Q psy135 7 FVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDG-RGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFK 75 (418)
Q Consensus 7 ~v~~Ws~edV~~WL~~~G~~ey~~~f~~~~~IdG-~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr 75 (418)
....|+.++|++||+..|+++|.+.| .+|++|+ +.|..||++||++ +||+..|+|+||+.+|++||
T Consensus 20 ~~~~~~~~~V~eWL~~lgL~qY~~~F-~~~g~~~le~l~~lt~~DL~~--lGIt~~GHRkkIL~aI~~LK 86 (86)
T 2k4p_A 20 HMSGLGEAGMSAWLRAIGLERYEEGL-VHNGWDDLEFLSDITEEDLEE--AGVQDPAHKRLLLDTLQLSK 86 (86)
T ss_dssp --CCCCSCSSHHHHHTTTCGGGHHHH-HTTTCCCHHHHTTCCHHHHHH--TTCCCHHHHHHHHHHHHHCC
T ss_pred cCCCCCcCcHHHHHHHCCCHHHHHHH-HHcCCChHHHHHhCCHHHHHH--CCCCCHHHHHHHHHHHHHcC
Confidence 34789999999999999999999999 7899975 8899999999999 99999999999999999885
No 30
>2dl0_A SAM and SH3 domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=1e-12 Score=109.29 Aligned_cols=72 Identities=19% Similarity=0.197 Sum_probs=66.5
Q ss_pred CccccCCCCHHHHHHHHHhcCCCchHHHHhHhcCCCc-cccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 4 AENFVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDG-RGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 4 ~~~~v~~Ws~edV~~WL~~~G~~ey~~~f~~~~~IdG-~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
..+++..|..++|++||...|+++|.+.| .+|++|+ +.+..||++||++ +||.+.||||||+++|+.||.+.
T Consensus 14 ~~~p~~~~~~~sV~eWL~~igL~qY~~~F-~~~g~d~le~l~~lt~~DL~~--lGIt~~gHrkkIl~ai~~lr~~~ 86 (97)
T 2dl0_A 14 CRKPVSPGCISSVSDWLISIGLPMYAGTL-STAGFSTLSQVPSLSHTCLQE--AGITEERHIRKLLSAARLFKLPP 86 (97)
T ss_dssp CCCCCCCSCCCSHHHHHHHHTCGGGHHHH-HHHTCCSTTSGGGCCHHHHHH--HTCCCHHHHHHHHHHHHTCCCCC
T ss_pred ccCCCCccccCcHHHHHHHCCCHHHHHHH-HHcCCCcHHHHHhcCHHHHHH--CCCCCHHHHHHHHHHHHHHHccc
Confidence 34677889999999999999999999999 7999998 7899999999999 99999999999999999998653
No 31
>1b0x_A Protein (EPHA4 receptor tyrosine kinase); protein interaction module, dimerization domain, transferase; 2.00A {Mus musculus} SCOP: a.60.1.2
Probab=99.19 E-value=3.2e-12 Score=105.56 Aligned_cols=65 Identities=14% Similarity=0.327 Sum_probs=60.8
Q ss_pred CCHHHHHHHHHhcCCCchHHHHhHhcCC-CccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 11 WTSEQVANWLTQKGHGKYAPLLCDQHRL-DGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 11 Ws~edV~~WL~~~G~~ey~~~f~~~~~I-dG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
-+.++|++||+..|+++|.+.| .+|+| |++.|+.||++||++ +||...||||||+.+|++||.+.
T Consensus 24 ~~~~~V~~WL~~lgL~~Y~~~F-~~~g~~~~~~l~~lt~~DL~~--lGI~~~GhrkkIl~ai~~L~~~~ 89 (94)
T 1b0x_A 24 SAVVSVGDWLQAIKMDRYKDNF-TAAGYTTLEAVVHMSQDDLAR--IGITAITHQNKILSSVQAMRTQM 89 (94)
T ss_dssp CSSCCHHHHHHHTTCGGGHHHH-HHTTCCSHHHHTTCCHHHHHH--HTCCCHHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHCCcHHHHHHH-HHcCCCCHHHHhhCCHHHHHH--CCCCChhHHHHHHHHHHHHHHHH
Confidence 3567999999999999999999 78999 889999999999999 99999999999999999999775
No 32
>3hil_A Ephrin type-A receptor 1; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.00A {Homo sapiens} PDB: 3kka_A
Probab=99.18 E-value=5e-12 Score=102.07 Aligned_cols=63 Identities=27% Similarity=0.416 Sum_probs=57.6
Q ss_pred CCCCHHHHHHHHHhcCCCchHHHHhHhcCCC-ccccccCCccccCCCCCCccccchHHHHHHHHHHH
Q psy135 9 LDWTSEQVANWLTQKGHGKYAPLLCDQHRLD-GRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESF 74 (418)
Q Consensus 9 ~~Ws~edV~~WL~~~G~~ey~~~f~~~~~Id-G~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~L 74 (418)
...+.++|++||+..|+++|.+.| .++++| ++.|..||++||++ +||.+.|+||||+.+|+.|
T Consensus 19 ~~~~~~~V~~WL~~lgL~qY~~~F-~~~g~~s~e~l~~lt~~DL~~--lGIt~~GHRkkIL~aiq~l 82 (82)
T 3hil_A 19 DGIPYRTVSEWLESIRMKRYILHF-HSAGLDTMECVLELTAEDLTQ--MGITLPGHQKRILCSIQGF 82 (82)
T ss_dssp -CCCCSSHHHHHHHTTCGGGHHHH-HHTTCCSGGGGTTCCHHHHHH--TTCCCHHHHHHHHHHHHHC
T ss_pred CCcchhHHHHHHHhCCHHHHHHHH-HHcCCChHHHHhcCCHHHHHH--CCCCCHHHHHHHHHHHHhC
Confidence 345678999999999999999999 799999 99999999999999 9999999999999999864
No 33
>3kka_C Ephrin type-A receptor 2; ATP-binding, kinase, nucleotide-binding, transferase, tyrosine-protein kinase, signal, sterIle alpha motif; 2.40A {Homo sapiens} SCOP: a.60.1.0
Probab=99.17 E-value=3.6e-12 Score=103.78 Aligned_cols=65 Identities=20% Similarity=0.377 Sum_probs=55.9
Q ss_pred CCHHHHHHHHHhcCCCchHHHHhHhcCCC-ccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 11 WTSEQVANWLTQKGHGKYAPLLCDQHRLD-GRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 11 Ws~edV~~WL~~~G~~ey~~~f~~~~~Id-G~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
-+.++|++||+..|+++|.+.| .++++| .+.|..||++||++ +||.+.|+||||+.+|++||.+.
T Consensus 19 ~~~~~V~~WL~~lgL~qY~~~F-~~~g~d~le~l~~lt~~DL~~--LGIt~~GHRkkIL~ai~~Lr~qm 84 (86)
T 3kka_C 19 VPFRTVSEWLESIKMQQYTEHF-MAAGYTAIEKVVQMTNDDIKR--IGVRLPGHQKRIAYSLLGLKDQV 84 (86)
T ss_dssp ----CHHHHHHHTTCGGGHHHH-HHTTCCSHHHHHTCCHHHHHH--TTCCCHHHHHHHHHHHHHCC---
T ss_pred cchhHHHHHHHhCCcHHHHHHH-HHcCCChHHHHHhCCHHHHHH--CCCCCHHHHHHHHHHHHHHHHHh
Confidence 4568999999999999999999 799999 58899999999999 99999999999999999998754
No 34
>1x40_A ARAP2; ASAP-related protein2, GTPase activity, signal transduction, SAM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.2
Probab=99.16 E-value=1.2e-11 Score=101.60 Aligned_cols=63 Identities=13% Similarity=0.251 Sum_probs=58.9
Q ss_pred HHHHHHHHHhcCCCchHHHHhHhcCCC-ccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 13 SEQVANWLTQKGHGKYAPLLCDQHRLD-GRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 13 ~edV~~WL~~~G~~ey~~~f~~~~~Id-G~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
..+|++||+..|+++|.+.| .+|++| .+.|..||++||++ +||++.||||||+++|++||.+.
T Consensus 15 ~~~V~~WL~~lgL~qY~~~F-~~~g~~~~~~l~~lt~~DL~~--lGI~~~GHrkkIl~ai~~L~~~~ 78 (91)
T 1x40_A 15 NVDIKDFLMSINLEQYLLHF-HESGFTTVKDCAAINDSLLQK--IGISPTGHRRRILKQLQIILSKM 78 (91)
T ss_dssp CCBHHHHHHTTTCGGGHHHH-HHHTCCBSGGGGGCCHHHHHH--HTCCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHCCCHHHHHHH-HHcCCCcHHHHhhcCHHHHHH--CCCCCHhHHHHHHHHHHHHHhhc
Confidence 46899999999999999999 789996 57899999999999 99999999999999999999886
No 35
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}
Probab=99.07 E-value=5.9e-11 Score=105.68 Aligned_cols=61 Identities=18% Similarity=0.297 Sum_probs=54.3
Q ss_pred cccCCCCHHHHHHHHHhc-CCCchHHHHhHhcCCCccccccCCccccC---CCCCCccccchHHHHH
Q psy135 6 NFVLDWTSEQVANWLTQK-GHGKYAPLLCDQHRLDGRGLFLLHEEDLK---SPPISIEILGDIKRII 68 (418)
Q Consensus 6 ~~v~~Ws~edV~~WL~~~-G~~ey~~~f~~~~~IdG~~LL~Lte~DLk---~~plgi~s~G~rkrl~ 68 (418)
.+|..||+|||++||+.. |+++|++.| ++|+|||+.|+.|++++.. .. |||++.+||.||.
T Consensus 76 s~V~nWTvedV~~WL~~~v~LpqY~~~F-r~~~IdG~~LprL~~~~~~~L~~~-LGI~~~~hR~Kl~ 140 (150)
T 2l5y_A 76 SEVHNWTLEDTLQWLIEFVELPQYEKNF-RDNNVKGTTLPRIAVHEPSFMISQ-LKISDRSHRQKLQ 140 (150)
T ss_dssp SHHHHCCHHHHHHHHHHHTCCTTSHHHH-HHHHCSSSTTTTCCSSSCCSTTTT-SSCCCHHHHHHHH
T ss_pred CcchhCCHHHHHHHHHHcCCcHHHHHHH-HHcCCCHHHhhhhhhcchHHHHHH-hCCCCHHHHHHHH
Confidence 467899999999999985 999999998 9999999999999997632 22 9999999999987
No 36
>2lmr_A ODIN, ankyrin repeat and SAM domain-containing protein; signaling protein; NMR {Homo sapiens}
Probab=99.03 E-value=2.8e-11 Score=101.41 Aligned_cols=65 Identities=22% Similarity=0.363 Sum_probs=58.5
Q ss_pred CCCHHHHHHHHHhcCCCchHHHHhHhcCCCccccc---cCCccccCCCCCCccccchHHHHHHHHHHHHHH
Q psy135 10 DWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLF---LLHEEDLKSPPISIEILGDIKRIIYDIESFKKE 77 (418)
Q Consensus 10 ~Ws~edV~~WL~~~G~~ey~~~f~~~~~IdG~~LL---~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~ 77 (418)
....++|++||++.|+++|.+.| .+|++||..++ .||++||++ |||++.|+||||+.+|+.|+..
T Consensus 26 ~~~~~~V~eWL~~LgL~qY~~~F-~~~g~d~~e~l~~~~Lt~eDL~e--LGIt~~GHRkkIL~aI~~L~~~ 93 (101)
T 2lmr_A 26 RTLEQSVGEWLESIGLQQYESKL-LLNGFDDVHFLGSNVMEEQDLRD--IGISDPQHRRKLLQAARSLPKV 93 (101)
T ss_dssp CCSSCCHHHHHHHHTCGGGHHHH-HHTTCCCTTSTTTSCCCHHHHHH--HTCCCHHHHHHHHHHHHTSSSC
T ss_pred CCCcccHHHHHHHCCCHHHHHHH-HHcCCChHHHHhhccCCHHHHHH--CCCCCHHHHHHHHHHHHHHHhc
Confidence 34456899999999999999999 79999998666 599999999 9999999999999999998865
No 37
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens}
Probab=99.00 E-value=1.3e-10 Score=103.43 Aligned_cols=61 Identities=16% Similarity=0.334 Sum_probs=55.0
Q ss_pred cccCCCCHHHHHHHHHhc-CCCchHHHHhHhcCCCccccccCCccc---cCCCCCCccccchHHHHH
Q psy135 6 NFVLDWTSEQVANWLTQK-GHGKYAPLLCDQHRLDGRGLFLLHEED---LKSPPISIEILGDIKRII 68 (418)
Q Consensus 6 ~~v~~Ws~edV~~WL~~~-G~~ey~~~f~~~~~IdG~~LL~Lte~D---Lk~~plgi~s~G~rkrl~ 68 (418)
.+|..||+|||++||++. |+++|++.| ++|+|||..|+.|+.++ |... |||++.+||.||.
T Consensus 76 s~V~nWTvedV~~WL~~~v~LpqY~~~F-r~~~I~G~~LprLa~~~~~~L~~~-LgI~~~~hRqKl~ 140 (150)
T 2k60_A 76 SEVYNWTVDEVVQWLITYVELPQYEETF-RKLQLSGHAMPRLAVTNTTMTGTV-LKMTDRSHRQKLQ 140 (150)
T ss_dssp SHHHHCCHHHHHHHHHHHHCCTTHHHHH-HHHCCSTTHHHHHSSCHHHHCSSC-SCSCHHHHHHHHH
T ss_pred CccccCCHHHHHHHHHHcCCcHHHHHHH-HHcCCCHHHHHhhccccHHHHHHh-cCCCCHHHHHHHH
Confidence 467899999999999765 899999999 99999999999999996 6454 9999999999976
No 38
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.99 E-value=1.5e-10 Score=92.69 Aligned_cols=68 Identities=21% Similarity=0.167 Sum_probs=57.3
Q ss_pred ccccCCCCHHHHHHHHHhcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHH
Q psy135 5 ENFVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESF 74 (418)
Q Consensus 5 ~~~v~~Ws~edV~~WL~~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~L 74 (418)
..+...||++||++||+-.|+++|+...|++|+|||..|+.|+|++|+++ +++++ =++|||+..|+-.
T Consensus 12 P~dLs~lSv~EVs~~Lr~igL~e~vv~~F~~e~IDG~lL~~L~ee~L~ed-f~ls~-Lq~kKi~~fI~GW 79 (84)
T 2dkz_A 12 PADLSGLSIEEVSKSLRFIGLSEDVISFFVTEKIDGNLLVQLTEEILSED-FKLSK-LQVKKIMQFINGS 79 (84)
T ss_dssp CSCCSSCCHHHHHHHGGGTCCCHHHHHHHHTTTCCHHHHHHCCHHHHHHT-SCCCH-HHHHHHHHHHHCC
T ss_pred chhhhhcCHHHHHHHHHHcCCcHHHHHHHHHHccchHHHHhCCHHHHHhh-cCCCH-HHHHHHHHHHhcC
Confidence 45789999999999999999998754444899999999999999999888 99944 4778888777543
No 39
>1v38_A SAM-domain protein samsn-1; structural genomics, hypothetical protein, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: a.60.1.2
Probab=98.98 E-value=1.3e-10 Score=92.84 Aligned_cols=67 Identities=16% Similarity=0.147 Sum_probs=61.1
Q ss_pred CCCCHHHHHHHHHhcCCCchHHHHhHhcCCCc-cccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 9 LDWTSEQVANWLTQKGHGKYAPLLCDQHRLDG-RGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 9 ~~Ws~edV~~WL~~~G~~ey~~~f~~~~~IdG-~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
.....++|.+||...|+++|.+.| .+|++|+ +.+..+|++||++ +||...|||+||+.+|+.|+.+.
T Consensus 8 ~~~~~~~V~eWL~~i~L~~Y~~~F-~~~gy~~~~~~~~lt~~DL~~--lGI~~~ghrkkil~ai~~L~~~~ 75 (78)
T 1v38_A 8 RRENHQTIQEFLERIHLQEYTSTL-LLNGYETLDDLKDIKESHLIE--LNIADPEDRARLLSAAESLLSGP 75 (78)
T ss_dssp CCSSCCBHHHHHHTTTCGGGHHHH-HHHTCCBHHHHTTCCHHHHHH--TTTCCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCcCcHHHHHHHCCCHHHHHHH-HHcCCCCHHHHhhcCHHHHHH--cCCCCHHHHHHHHHHHHHHHhcc
Confidence 556788999999999999999999 7899987 5688999999999 99999999999999999998754
No 40
>3sei_A Caskin-1; SAM domain, protein-protein interaction, signaling protein; 2.40A {Homo sapiens} PDB: 3sen_A
Probab=98.97 E-value=9.1e-11 Score=104.65 Aligned_cols=63 Identities=29% Similarity=0.360 Sum_probs=59.4
Q ss_pred CHHHHHHHHHhcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHH
Q psy135 12 TSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKE 77 (418)
Q Consensus 12 s~edV~~WL~~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~ 77 (418)
+.++|++||...|+++|.+.| .+|++||+.|+.||++||++ +||++.|+||||+++|+.|+..
T Consensus 9 ~~~~V~~WL~~lgL~~Y~~~F-~~~g~d~~~l~~lt~~DL~~--lGIt~~gHrkkil~ai~~L~~~ 71 (149)
T 3sei_A 9 SSEAVSQWLTAFQLQLYAPNF-ISAGYDLPTISRMTPEDLTA--IGVTKPGHRKKIAAEISGLSIP 71 (149)
T ss_dssp HHHHHHHHHHTTTCGGGHHHH-HHTTCCHHHHTTCCHHHHHH--TTCCSHHHHHHHHHHHHTCCCC
T ss_pred cHHHHHHHHHHCCcHHHHHHH-HHcCCCHHHHccCCHHHHHH--cCCCCHHHHHHHHHHHHHHHhc
Confidence 468999999999999999999 78999999999999999998 9999999999999999998764
No 41
>2kiv_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, tandem, signaling protein, alternative splicing, ANK repeat; NMR {Homo sapiens}
Probab=98.92 E-value=1.2e-10 Score=103.58 Aligned_cols=63 Identities=25% Similarity=0.408 Sum_probs=57.7
Q ss_pred CHHHHHHHHHhcCCCchHHHHhHhcCCCccccc---cCCccccCCCCCCccccchHHHHHHHHHHHHHH
Q psy135 12 TSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLF---LLHEEDLKSPPISIEILGDIKRIIYDIESFKKE 77 (418)
Q Consensus 12 s~edV~~WL~~~G~~ey~~~f~~~~~IdG~~LL---~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~ 77 (418)
+.++|++||++.|+++|.+.| .+|++||..++ .||++||++ +||++.|+||||+.+|+.|+..
T Consensus 13 ~~~~V~~WL~~igL~~Y~~~F-~~~g~d~~~~l~~~~lt~~DL~~--lGI~~~ghRkkil~ai~~L~~~ 78 (148)
T 2kiv_A 13 SVQTVGQWLESIGLPQYENHL-MANGFDNVQAMGSNVMEDQDLLE--IGILNSGHRQRILQAIQLLPKM 78 (148)
T ss_dssp -CCBHHHHHHHHSCTTSHHHH-HHTTTTBGGGGTSSCCCHHHHHH--HCCSSTTSHHHHHHHHHHCSCC
T ss_pred CcchHHHHHHHCCCHHHHHHH-HHcCCCHHHHhhhccCCHHHHHH--CCCCCHHHHHHHHHHHHHHHHh
Confidence 557899999999999999999 79999997776 899999998 9999999999999999999864
No 42
>3sei_A Caskin-1; SAM domain, protein-protein interaction, signaling protein; 2.40A {Homo sapiens} PDB: 3sen_A
Probab=98.89 E-value=4.1e-10 Score=100.37 Aligned_cols=65 Identities=22% Similarity=0.354 Sum_probs=59.2
Q ss_pred CCCHHHHHHHHHhcCCCchHHHHhHhcCCC-ccccccCCccccCCCCCCccccchHHHHHHHHHHHHHH
Q psy135 10 DWTSEQVANWLTQKGHGKYAPLLCDQHRLD-GRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKE 77 (418)
Q Consensus 10 ~Ws~edV~~WL~~~G~~ey~~~f~~~~~Id-G~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~ 77 (418)
.-++.+|++||+..|+++|.+.| .+|++| ++.|..||++||++ +||++.|||+||+.+|+.|+..
T Consensus 76 ~~~p~~v~~WL~~igL~qY~~~F-~~~g~d~~~~l~~lt~~dL~~--lGI~~~gHr~kIl~ai~~l~~~ 141 (149)
T 3sei_A 76 EHKPANLAVWLSMIGLAQYYKVL-VDNGYENIDFITDITWEDLQE--IGITKLGHQKKLMLAVRKLAEL 141 (149)
T ss_dssp SSCCSCHHHHHHHTTCGGGHHHH-HHTTCCSHHHHTTCCHHHHHH--HTCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHcCchhhHHHH-HHCCCchHHHHhhCCHHHHHH--CCCCCHHHHHHHHHHHHHHHHH
Confidence 33567899999999999999999 799999 78999999999998 9999999999999999998754
No 43
>3tac_B Liprin-alpha-2; transferase-protein binding complex; 2.20A {Homo sapiens} PDB: 3tad_A
Probab=98.85 E-value=1e-09 Score=108.39 Aligned_cols=72 Identities=15% Similarity=0.201 Sum_probs=66.5
Q ss_pred ccccCCCCHHHHHHHHHh-cCCCc-hHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 5 ENFVLDWTSEQVANWLTQ-KGHGK-YAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 5 ~~~v~~Ws~edV~~WL~~-~G~~e-y~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
..+..+|+.++|+.||+. .||++ |++.| ++|.+||+.|+.||++||.++ |||++.+|||||..+|++++...
T Consensus 33 ~~Pfs~W~~~~V~aWLe~~iGmp~~Yv~~~-r~nvkSG~~Ll~LSd~dLeke-LGI~nPLHRKKL~LAIqel~~~~ 106 (334)
T 3tac_B 33 GLPFAQWDGPTVVAWLELWLGMPAWYVAAC-RANVKSGAIMSALSDTEIQRE-IGISNPLHRLKLRLAIQEMVSLT 106 (334)
T ss_dssp TCCGGGCCHHHHHHHHHHTTCCCHHHHHHH-HHHCCSHHHHHTCCHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHT
T ss_pred CCChhhCCcHHHHHHHHHHhcChHHHHHHH-HHHccchHHHHhCCHHHHHHH-hCCCCHHHHHHHHHHHHHHHhcc
Confidence 356899999999999999 89998 99988 899999999999999999765 99999999999999999998764
No 44
>3tad_C Liprin-beta-1; protein binding; 2.90A {Mus musculus}
Probab=98.69 E-value=6.4e-09 Score=100.68 Aligned_cols=69 Identities=23% Similarity=0.297 Sum_probs=64.5
Q ss_pred ccCCCCHHHHHHHHHhcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 7 FVLDWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 7 ~v~~Ws~edV~~WL~~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
...+++...|++||...|+++|.+.| .+|.|||+.|..||++||++ +||.+.|||++|+.+|+.||+..
T Consensus 86 ~~~~~d~~wv~~WL~~IGL~QY~~~F-~~~~iDg~~L~~LT~~DL~~--LGIt~~~HR~kil~aI~~L~~~~ 154 (265)
T 3tad_C 86 NYGKLDFNWVTRWLDDIGLPQYKTQF-DEGRVDGRMLHYMTVDDLLS--LKVVSVLHHLSIKRAIQVLRINN 154 (265)
T ss_dssp SGGGCCHHHHHHHHHHHTCGGGHHHH-HHHTCCHHHHHTCBHHHHHH--TTCCBHHHHHHHHHHHHHHHHTT
T ss_pred cccccChHHHHHHHHHcCcHHHHHHH-HHcCCCHHHhcccCHHHHHH--cCCCcHHhHHHHHHHHHHHhhcC
Confidence 34688999999999999999999999 69999999999999999997 99999999999999999998765
No 45
>2d3d_A VTS1 protein; RNA binding, SAM domain, SRE hairpin binding, RNA binding protein; 1.60A {Saccharomyces cerevisiae} PDB: 2f8k_A 2fe9_A
Probab=98.67 E-value=6.1e-09 Score=84.80 Aligned_cols=60 Identities=18% Similarity=0.259 Sum_probs=55.3
Q ss_pred HHHHHHHHhcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 14 EQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 14 edV~~WL~~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
++|.+||++.|+.+|.+.| .+++=+.++.|||+||++ +|++.+|+|+|++.+|++||...
T Consensus 19 ~~V~~WL~sLrLhKY~~~F---~~~~~~~l~~LtdedL~~--~GVta~GaRrKil~aI~~lr~~~ 78 (88)
T 2d3d_A 19 KNIPMWLKSLRLHKYSDAL---SGTPWIELIYLDDETLEK--KGVLALGARRKLLKAFGIVIDYK 78 (88)
T ss_dssp TCHHHHHHHTTCGGGHHHH---TTSCHHHHTTCCHHHHHH--TTCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHcccchhHHHH---hcCCHHHHHHcCHHHHHH--cCCccHhHHHHHHHHHHHHHHHH
Confidence 5899999999999999999 346778999999999999 99999999999999999999865
No 46
>2es6_A VTS1P; SAM domain, protein structure, gene regulation; NMR {Saccharomyces cerevisiae} PDB: 2ese_A
Probab=98.64 E-value=5.9e-09 Score=86.66 Aligned_cols=60 Identities=18% Similarity=0.259 Sum_probs=55.4
Q ss_pred HHHHHHHHhcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 14 EQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 14 edV~~WL~~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
+||.+||++.|+.+|.+.| .+++=+.++.|||+||++ +|++.+|.|+||+.+|++||...
T Consensus 32 ~dV~~WLksLrLhKY~~~F---~~~~~~~l~~LTdedL~~--~GVta~GARrKiL~aI~~Lr~~k 91 (101)
T 2es6_A 32 KNIPMWLKSLRLHKYSDAL---SGTPWIELIYLDDETLEK--KGVLALGARRKLLKAFGIVIDYK 91 (101)
T ss_dssp TCHHHHHHTTTCCCTHHHH---TTSCHHHHTTCCHHHHHH--HTCCSHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHccCcchHHHH---ccCCHHHHHhcCHHHHHH--cCCccHhHHHHHHHHHHHHHHHH
Confidence 5899999999999999999 336778999999999999 99999999999999999999864
No 47
>2kiv_A Ankyrin repeat and sterIle alpha motif domain- containing protein 1B; SAM domain, tandem, signaling protein, alternative splicing, ANK repeat; NMR {Homo sapiens}
Probab=98.62 E-value=6.3e-09 Score=92.44 Aligned_cols=61 Identities=23% Similarity=0.357 Sum_probs=55.9
Q ss_pred CCCHHHHHHHHHhcCCCchHHHHhHhcCCCc-cccccCCcccc-CCCCCCccccchHHHHHHHHHH
Q psy135 10 DWTSEQVANWLTQKGHGKYAPLLCDQHRLDG-RGLFLLHEEDL-KSPPISIEILGDIKRIIYDIES 73 (418)
Q Consensus 10 ~Ws~edV~~WL~~~G~~ey~~~f~~~~~IdG-~~LL~Lte~DL-k~~plgi~s~G~rkrl~~~I~~ 73 (418)
..++++|++||+..|+++|.+.| .++++|| +.|..+|++|| ++ +||.+.||||||+.+|++
T Consensus 85 ~~~~~~v~~WL~~i~L~qY~~~F-~~~g~~~~~~l~~lt~~dLl~~--lGI~~~gHrkrIl~ai~~ 147 (148)
T 2kiv_A 85 GAHPTSVAEWLDSIELGDYTKAF-LINGYTSMDLLKKIAEVELINV--LKINLIGHRKRILASLGD 147 (148)
T ss_dssp CCCCSSHHHHHHTTTCCTHHHHH-HHHTCCSHHHHTSCCHHHHHHH--TCCCCHHHHHHHHHHHTC
T ss_pred CCCcchHHHHHHHCCcHHHHHHH-HHcCCChHHHHHhCCHHHHHHh--CCCCChhHHHHHHHHHhh
Confidence 46778999999999999999999 7999998 78999999997 88 999999999999999864
No 48
>2b6g_A VTS1P; alpha-helix, pentaloop, hairpin, RNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=98.54 E-value=1.6e-08 Score=86.67 Aligned_cols=61 Identities=18% Similarity=0.244 Sum_probs=56.6
Q ss_pred HHHHHHHHHhcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 13 SEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 13 ~edV~~WL~~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
-++|.+||+..|+.+|.+.| .+++-+.|+.||++||++ +|+..+|+|+|++.+|++||+..
T Consensus 49 ~~dV~~WL~sLrL~KY~~~F---~~~~~d~l~~LTeeDL~~--lGVta~GaRrKlL~AI~~Lr~~k 109 (119)
T 2b6g_A 49 LKNIPMWLKSLRLHKYSDAL---SGTPWIELIYLDDETLEK--KGVLALGARRKLLKAFGIVIDYK 109 (119)
T ss_dssp HHCHHHHHHHHTCHHHHHHH---TTSCHHHHTTCCHHHHHH--HSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHCCChhHHHHH---ccCCHHHHHhcCHHHHHH--CCCCccccHHHHHHHHHHHHhhh
Confidence 47899999999999999999 458889999999999999 99999999999999999999864
No 49
>2qar_B Telsam domain; polymer, crystallization modules, sterIle alpha motif, hydro regulator; 2.40A {Escherichia coli}
Probab=98.48 E-value=2.1e-08 Score=82.65 Aligned_cols=71 Identities=21% Similarity=0.455 Sum_probs=54.7
Q ss_pred cccCCCCHHHHHHHHHhcCCCchH-HH-HhHhcCCCccccccCCccccCC-CCCCccccchHHHHHHHHHHHHHHhhhcc
Q psy135 6 NFVLDWTSEQVANWLTQKGHGKYA-PL-LCDQHRLDGRGLFLLHEEDLKS-PPISIEILGDIKRIIYDIESFKKEIHNDI 82 (418)
Q Consensus 6 ~~v~~Ws~edV~~WL~~~G~~ey~-~~-f~~~~~IdG~~LL~Lte~DLk~-~plgi~s~G~rkrl~~~I~~Lr~~~~~~~ 82 (418)
.++..||.+||.+||+..+ .+|. .. -+.+++|||+.|+.||++|++. .|. .|+. |+..++.||++....+
T Consensus 10 ~DP~~WS~~~V~~WL~w~~-~ef~L~~i~~~~f~mdGk~Lc~Lt~edF~~~~p~----~Gdi--L~~hL~~Lk~~~~~~~ 82 (93)
T 2qar_B 10 LQPIYWSRDDVAQWLKWAE-NEFSLSPIDSNTFEMNGKALLLLTKEDFRYRSPH----SGDV--LYELLQHILKQRDLEA 82 (93)
T ss_dssp SCGGGCCHHHHHHHHHHHH-HHTTCCCCCGGGGCSCHHHHTTCCHHHHHHHCTT----THHH--HHHHHHHHHHHHHHHH
T ss_pred CChhhCCHHHHHHHHHHHH-HhcCCCCcchhcCCCCHHHHHcCCHHHHhhhCCc----chHH--HHHHHHHHHHhcHHHH
Confidence 5789999999999998654 4444 11 1367889999999999999987 433 3776 9999999998875544
Q ss_pred c
Q psy135 83 R 83 (418)
Q Consensus 83 ~ 83 (418)
+
T Consensus 83 ~ 83 (93)
T 2qar_B 83 E 83 (93)
T ss_dssp H
T ss_pred H
Confidence 3
No 50
>2y9u_A Tumor protein 63; apoptosis, sterIle alpha motif, 5-helix bundle, mutations, A syndrome; 1.60A {Homo sapiens} PDB: 1rg6_A
Probab=98.43 E-value=9.7e-08 Score=74.50 Aligned_cols=62 Identities=15% Similarity=0.069 Sum_probs=54.4
Q ss_pred HHHHHHHhcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHhh
Q psy135 15 QVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEIH 79 (418)
Q Consensus 15 dV~~WL~~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~~ 79 (418)
.|.+||...++++|.+.|....--+=..+..||.+||++ +||.. ||+||+|.+|..||.+++
T Consensus 6 sv~~WLd~i~m~~Y~d~F~~~g~~s~~~v~~lt~eDL~~--~GIt~-ghqkkIl~siq~lr~~~~ 67 (69)
T 2y9u_A 6 SIVSFLARLGCSSCLDYFTTQGLTTIYQIEHYSMDDLAS--LKIPE-QFRHAIWKGILDHRQLHE 67 (69)
T ss_dssp BHHHHHHTTTCGGGHHHHHTTTCCBHHHHTTCCHHHHHH--TTCCH-HHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHcCChHHHHHHHHcCCCcHHHHHHcCHHHHHh--cCCCh-hhHHHHHHhHHHHHhccc
Confidence 488999999999999999544445566799999999999 89987 999999999999998864
No 51
>2y9t_A Tumor protein 63; apoptosis, sterIle alpha motif, 5-helix bundle; NMR {Homo sapiens}
Probab=98.38 E-value=1.9e-07 Score=75.24 Aligned_cols=63 Identities=14% Similarity=0.052 Sum_probs=55.5
Q ss_pred HHHHHHHhcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHhhh
Q psy135 15 QVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEIHN 80 (418)
Q Consensus 15 dV~~WL~~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~~~ 80 (418)
.|.+||..+|+++|.+.|....--+=..+..||.+||++ +||.. ||+||+|.+|..||.+...
T Consensus 8 SV~~WLd~i~m~~Y~d~F~~~G~~sl~~V~~lt~eDL~~--mGIt~-gHqkkIl~siq~lr~~~~~ 70 (82)
T 2y9t_A 8 SIVSFLARLGCSSCLDYFTTQGLTTIYQIEHYSMDDLAS--LKIPE-QFRHAIWKGILDHRQLHEF 70 (82)
T ss_dssp BHHHHHHHHTCGGGHHHHHTTTCCBSGGGTTCCHHHHHH--TTCCH-HHHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHcCchHHHHHHHHcCCCcHHHHHhcCHHHHHh--cCCCh-hhHHHHHhhHHHHHHHhcc
Confidence 589999999999999999544446667799999999999 89987 9999999999999998743
No 52
>1oxj_A RNA-binding protein smaug; SAM domain, PHAT domain; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 a.118.1.13
Probab=98.16 E-value=5.6e-07 Score=81.35 Aligned_cols=59 Identities=20% Similarity=0.405 Sum_probs=53.6
Q ss_pred HHHHHHHHhcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 14 EQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 14 edV~~WL~~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
.+|..||++.++.+|.+.| .+++=+.++.|||+||.+ +|++. |+|+|++.+|++||.+.
T Consensus 8 ~dV~~WLksLrLhKY~~~F---~~~~~e~~~~LTdedL~~--~GVT~-GARrKIL~aIq~Lrer~ 66 (173)
T 1oxj_A 8 SGIGLWLKSLRLHKYIELF---KNMTYEEMLLITEDFLQS--VGVTK-GASHKLALCIDKLKERA 66 (173)
T ss_dssp TTHHHHHHHTTCGGGGGGG---TTCCHHHHTTCCHHHHHH--TTCCH-HHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHcccchhHHHH---ccCCHHHHHhcCHHHHHH--CCCch-HHHHHHHHHHHHHHHHh
Confidence 4899999999999999999 346677999999999999 89996 99999999999999765
No 53
>1sv0_C Modulator of the activity of ETS CG15085-PA; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1
Probab=97.96 E-value=3.3e-06 Score=67.87 Aligned_cols=63 Identities=22% Similarity=0.370 Sum_probs=47.6
Q ss_pred CccccCCCCHHHHHHHHHh----cCCC-chHHHHhHhcCCCccccccCCccccCC-CCCCccccchHHHHHHHHHHH
Q psy135 4 AENFVLDWTSEQVANWLTQ----KGHG-KYAPLLCDQHRLDGRGLFLLHEEDLKS-PPISIEILGDIKRIIYDIESF 74 (418)
Q Consensus 4 ~~~~v~~Ws~edV~~WL~~----~G~~-ey~~~f~~~~~IdG~~LL~Lte~DLk~-~plgi~s~G~rkrl~~~I~~L 74 (418)
-+.++..||.+||.+||+. .+++ +-+ .+ .++++||++|+.||++|+++ .| ..|+. |+..++.+
T Consensus 7 i~~dP~~Ws~~~V~~WL~w~~~e~~l~l~~~-~~-~~f~m~G~~Lc~ls~edF~~~~p----~~Gdi--L~~hL~~~ 75 (82)
T 1sv0_C 7 LPLDPRDWTRADVWKWLINMAVSEGLEVTAE-LP-QKFPMNGKALCLMSLDMYLCRVP----VGGKM--LYRDFRVR 75 (82)
T ss_dssp SBSSGGGCCHHHHHHHHHHHHHHHTCCCCTH-HH-HTCCSCHHHHHHCCHHHHHHHCT----TTHHH--HHHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHHHHHhCCCCCCC-cc-ccCCCCHHHHHhCCHHHHHhhCC----CchHH--HHHHHHHH
Confidence 4578899999999999963 3443 222 24 46789999999999999998 43 56776 88888844
No 54
>1ji7_A ETS-related protein TEL1; helical polymer, transcription; 1.45A {Homo sapiens} SCOP: a.60.1.1 PDB: 2qar_A 2qb0_A 1lky_A 1lky_B 2qb1_A
Probab=97.96 E-value=1.1e-06 Score=71.79 Aligned_cols=68 Identities=18% Similarity=0.365 Sum_probs=48.3
Q ss_pred ccccCCCCHHHHHHHHHhcCCCchH-H-HHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 5 ENFVLDWTSEQVANWLTQKGHGKYA-P-LLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 5 ~~~v~~Ws~edV~~WL~~~G~~ey~-~-~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
..++..||++||++||+.. ..||. . .-+.+++|||++|+.||++|+++- .+. . ..-|+..++.|+..-
T Consensus 9 ~~DP~~WS~~~V~~WL~w~-~~ef~L~~~~~~~f~mdGk~Lc~Ls~edF~~~-~p~--~--GdiL~~hL~~l~~~~ 78 (89)
T 1ji7_A 9 RLQPIYWSRDDVAQWLKWA-ENEFSLRPIDSNTFEMNGKALLLLTKEDFRYR-SPH--S--GDELYELLQHILKQR 78 (89)
T ss_dssp CSCGGGCCHHHHHHHHHHH-HHHTTCSCCCTTTTCSCHHHHTTCCHHHHHHH-CTT--T--HHHHHHHHHHHHHC-
T ss_pred CCChhhCCHHHHHHHHHHH-HHhcCCCCCchhcCCCCHHHHHcCCHHHHHhH-cCC--c--hHHHHHHHHHHHhCc
Confidence 3578999999999999854 33443 1 112567899999999999999862 232 2 445778888887653
No 55
>3tac_B Liprin-alpha-2; transferase-protein binding complex; 2.20A {Homo sapiens} PDB: 3tad_A
Probab=97.79 E-value=9.9e-06 Score=80.17 Aligned_cols=66 Identities=21% Similarity=0.280 Sum_probs=59.0
Q ss_pred CCHHHHH-HHHHhcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 11 WTSEQVA-NWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 11 Ws~edV~-~WL~~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
-+.+=|. +||...|++||.+.| .+|.|||+.|-.||++||+.. +||.+..||++|..+|+-||+.+
T Consensus 160 ldh~WV~~~WL~dIGLpQY~~~F-~~~~VDgR~L~~Lt~~DL~~~-LgIt~~~Hr~sI~~gI~~Lr~~~ 226 (334)
T 3tac_B 160 MNHEWIGNEWLPSLGLPQYRSYF-MECLVDARMLDHLTKKDLRVH-LKMVDSFHRTSLQYGIMCLKRLN 226 (334)
T ss_dssp CCHHHHHHTHHHHTTCGGGHHHH-HHTTCCHHHHTTCCHHHHHHT-TCCCCHHHHHHHHHHHHHHHHTT
T ss_pred CccCcchhhhccccChHHhHHHH-HhcCcchhhhhhccHHHHHhc-cCCCcHHHHHHHHHHHHHhhhcC
Confidence 3455677 899999999999999 699999999999999999544 99999999999999999998655
No 56
>1wwu_A Hypothetical protein FLJ21935; structural genomics, protein regulation, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens}
Probab=97.53 E-value=3.6e-05 Score=63.68 Aligned_cols=61 Identities=25% Similarity=0.298 Sum_probs=51.7
Q ss_pred CCCHHHHHHHHHhcCCCch-HHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 10 DWTSEQVANWLTQKGHGKY-APLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 10 ~Ws~edV~~WL~~~G~~ey-~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
+=+++||.+||+.+||++| ++.| ...+|..|+.||.+||+. .+-.+.-|+...|..-|...
T Consensus 23 ~Ssp~EV~~WL~~kgFS~~tv~~L---g~ltGaqLf~Ltk~eL~~-----vCg~EG~RlysqL~~qk~~l 84 (99)
T 1wwu_A 23 ESGPDEVRAWLEAKAFSPRIVENL---GILTGPQLFSLNKEELKK-----VCGEEGVRVYSQLTMQKAFL 84 (99)
T ss_dssp TCCHHHHHHHHHHHTCCTTHHHHT---TSSCHHHHHTCCHHHHHH-----HHTTTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHH---cCCCHHHHHcCCHHHHHH-----HCcchhHHHHHHHHHHHHHH
Confidence 4589999999999999999 7766 889999999999999988 23368889999887777654
No 57
>2e8m_A Epidermal growth factor receptor kinase substrate 8; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.49 E-value=2.9e-05 Score=64.17 Aligned_cols=60 Identities=30% Similarity=0.481 Sum_probs=51.0
Q ss_pred CCCHHHHHHHHHhcCCCch-HHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 10 DWTSEQVANWLTQKGHGKY-APLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 10 ~Ws~edV~~WL~~~G~~ey-~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
+=+++||.+||+.+||++| ++.| ...+|..|+.||.+||+. + +- +.-|+...|..-|...
T Consensus 33 ~Ssp~EV~~WL~~kgFS~~tv~~L---g~ltGaqLl~Ltk~eL~~--v---Cg-EG~RlysqL~vqk~~l 93 (99)
T 2e8m_A 33 DSTPEDVKTWLQSKGFNPVTVNSL---GVLNGAQLFSLNKDELRT--V---CP-EGARVYSQITVQKAAL 93 (99)
T ss_dssp TCCTTHHHHHHHHHTCCHHHHHHT---SSSCHHHHHHCCHHHHHH--H---CT-THHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHH---cCCCHHHHHcCCHHHHHH--H---CC-chHHHHHHHHHHHHHH
Confidence 4588999999999999998 7766 889999999999999998 2 22 8899999887777654
No 58
>1x66_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.23 E-value=8.8e-05 Score=61.52 Aligned_cols=66 Identities=17% Similarity=0.291 Sum_probs=47.9
Q ss_pred cccCCCCHHHHHHHHH----hcCCCchHHHHhHhc-CCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 6 NFVLDWTSEQVANWLT----QKGHGKYAPLLCDQH-RLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 6 ~~v~~Ws~edV~~WL~----~~G~~ey~~~f~~~~-~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
.+...||.+||.+||+ +-++... ++ ... ++||+.|+.|+.+|+.+ .--...|+. |+..++.||+..
T Consensus 22 ~DP~~Ws~~~V~~WL~W~~~ef~L~~v--~~-~~F~~m~G~~LC~ls~edF~~--~~~~~~Gdi--L~~hL~~Lk~~~ 92 (98)
T 1x66_A 22 ADPTLWTQEHVRQWLEWAIKEYSLMEI--DT-SFFQNMDGKELCKMNKEDFLR--ATTLYNTEV--LLSHLSYLRESS 92 (98)
T ss_dssp SSGGGCCTTHHHHHHHHHHHHTTCCSC--CG-GGGTTCCHHHHHHCCHHHHHT--TSCHHHHHH--HHHHHHHHHTCS
T ss_pred CChhhcCHHHHHHHHHHHHHhcCCCCC--Ch-hhCCCCCHHHHHcCCHHHHHH--HcCCCchHH--HHHHHHHHHhcC
Confidence 5678999999999998 3344332 12 334 79999999999999977 221224555 889999999753
No 59
>1sxe_A Transcriptional regulator ERG; alpha helical, signaling protein; NMR {Homo sapiens} SCOP: a.60.1.1
Probab=97.18 E-value=0.00019 Score=59.38 Aligned_cols=65 Identities=15% Similarity=0.379 Sum_probs=47.2
Q ss_pred cccCCCCHHHHHHHHH----hcCCCchHHHHhHhc-CCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHH
Q psy135 6 NFVLDWTSEQVANWLT----QKGHGKYAPLLCDQH-RLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKE 77 (418)
Q Consensus 6 ~~v~~Ws~edV~~WL~----~~G~~ey~~~f~~~~-~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~ 77 (418)
.+...||.++|++||+ +.+++..- + ... .+||+.|..||.+|+.. ..-...|+ -|+..++.||+.
T Consensus 25 ~DP~~Ws~~~V~~WL~W~~~ef~L~~i~--~-~~F~~m~G~~LC~lt~edF~~--~~p~~~Gd--iL~~hL~~Lk~~ 94 (97)
T 1sxe_A 25 ADPTLWSTDHVRQWLEWAVKEYGLPDVN--I-LLFQNIDGKELCKMTKDDFQR--LTPSYNAD--ILLSHLHYLRET 94 (97)
T ss_dssp SSTTSCCHHHHHHHHHHHHHHHTCSSCC--G-GGSTTCCHHHHTTCCHHHHTT--TSCHHHHH--HHHHHHHHHTTS
T ss_pred cchhccCHHHHHHHHHHHHHhcCCCCCC--H-HhcCCCCHHHHHhCCHHHHHH--HcCCCchH--HHHHHHHHHHhC
Confidence 4678999999999998 34554321 2 344 79999999999999987 22112344 478888888865
No 60
>1sv0_A ETS DNA-binding protein pokkuri; alpha-helix, 3(10) helix, transcription; 2.07A {Drosophila melanogaster} SCOP: a.60.1.1 PDB: 1sv4_A
Probab=97.11 E-value=0.00013 Score=58.91 Aligned_cols=66 Identities=20% Similarity=0.222 Sum_probs=48.5
Q ss_pred ccccCCCCHHHHHHHHH----hcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 5 ENFVLDWTSEQVANWLT----QKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 5 ~~~v~~Ws~edV~~WL~----~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
..+...||.++|.+||+ +-++++- ++ ...++||+.|+.||.+|+..- .+ +...-|+..++.||+..
T Consensus 7 p~DP~~Ws~~~V~~WL~W~~~ef~L~~i--~~-~~F~m~G~~LC~ls~edF~~~-~p----~~GdiL~~hL~~Lk~~~ 76 (85)
T 1sv0_A 7 PSDPRLWSREDVLVFLRFCVREFDLPKL--DF-DLFQMNGKRLCLLTRADFGHR-CP----GAGDVLHNVLQMLIIES 76 (85)
T ss_dssp CSSGGGCCHHHHHHHHHHHHHHTTCCCC--CG-GGGCSCHHHHTTCCHHHHHHH-ST----TTHHHHHHHHHHHHHHH
T ss_pred CCChhhCCHHHHHHHHHHHHHccCCCCC--Ch-hhCCCCHHHHHcCCHHHHHHH-cC----CchHHHHHHHHHHHHhh
Confidence 35678999999999998 2333332 23 345699999999999999872 12 24566888999998765
No 61
>2e8p_A ELF3 protein; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.88 E-value=0.00032 Score=57.48 Aligned_cols=65 Identities=15% Similarity=0.200 Sum_probs=47.3
Q ss_pred cccCCCCHHHHHHHHHh----cCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHH
Q psy135 6 NFVLDWTSEQVANWLTQ----KGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKK 76 (418)
Q Consensus 6 ~~v~~Ws~edV~~WL~~----~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~ 76 (418)
.+...||.++|.+||.- .+|+--...+ ...++||+.|..|+.||+..- -+ ....-|+..++.||+
T Consensus 22 ~dP~~Ws~~~V~~WL~Wavke~~~dl~~i~~-~~f~m~G~~LC~mskedF~~~-~p----~~GdiL~~hL~~L~~ 90 (92)
T 2e8p_A 22 EQPQFWSKTQVLDWISYQVEKNKYDASAIDF-SRCDMDGATLCNCALEELRLV-FG----PLGDQLHAQLRDLTS 90 (92)
T ss_dssp SCGGGCCHHHHHHHHHHHHHHTTCCCSSCCT-TTCCCCSHHHHHSCHHHHHHH-SG----GGHHHHHHHHHHHHH
T ss_pred CChhhcCHHHHHHHHHHHHHHhCCCCCCCCh-hhcCCCHHHHHcCCHHHHHHH-cC----CcHHHHHHHHHHHHh
Confidence 46789999999999983 3564212223 456799999999999999872 11 134567888888886
No 62
>2dkx_A SAM pointed domain-containing ETS transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.77 E-value=0.00031 Score=57.97 Aligned_cols=66 Identities=21% Similarity=0.356 Sum_probs=49.0
Q ss_pred ccccCCCCHHHHHHHHH----hcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 5 ENFVLDWTSEQVANWLT----QKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 5 ~~~v~~Ws~edV~~WL~----~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
..+...||.++|++||+ +-+++..- + ...++||+.|..|+.+|+.. ..- ..| .-|+..++.||...
T Consensus 21 p~DP~~Ws~~~V~~WL~W~~~ef~L~~i~--~-~~f~m~G~~LC~lskedF~~--~~p-~~G--diL~~hL~~Lk~~~ 90 (96)
T 2dkx_A 21 TADPMDWSPSNVQKWLLWTEHQYRLPPMG--K-AFQELAGKELCAMSEEQFRQ--RSP-LGG--DVLHAHLDIWKSAA 90 (96)
T ss_dssp CSCGGGCCSSTHHHHHHHHHHHTTCCCCH--H-HHSSCCHHHHHHSCHHHHHH--HCS-SST--HHHHHHHHHHHHHH
T ss_pred CCChhhCCHHHHHHHHHHHHHhcCCCCCC--c-ccCCCCHHHHHhCCHHHHHH--HcC-cch--HHHHHHHHHHHhcc
Confidence 35678999999999998 34555432 2 33569999999999999987 222 234 45889999999865
No 63
>2ytu_A Friend leukemia integration 1 transcription factor; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.73 E-value=0.00032 Score=60.82 Aligned_cols=65 Identities=17% Similarity=0.305 Sum_probs=47.2
Q ss_pred cccCCCCHHHHHHHHH----hcCCCchHHHHhHhc-CCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHH
Q psy135 6 NFVLDWTSEQVANWLT----QKGHGKYAPLLCDQH-RLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKE 77 (418)
Q Consensus 6 ~~v~~Ws~edV~~WL~----~~G~~ey~~~f~~~~-~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~ 77 (418)
.+...||.++|++||+ +-++..- .+ ... .+||+.|+.|+.+|+.+ .--...|+. |+..++.||+.
T Consensus 36 ~DP~~WS~~~V~~WL~Wa~~ef~L~~i--d~-~~Fq~mnGk~LC~LskeDF~~--~~p~~~GDi--L~~hL~~Lr~~ 105 (128)
T 2ytu_A 36 ADPTLWTQEHVRQWLEWAIKEYSLMEI--DT-SFFQNMDGKELCKMNKEDFLR--ATTLYNTEV--LLSHLSYLRES 105 (128)
T ss_dssp SCGGGCCTTHHHHHHHHHHHHTCCCSC--CC-GGGSSCCTTHHHHCCHHHHHH--HSCHHHHHH--HHHHHHHHHHH
T ss_pred cchhhCCHHHHHHHHHHHHHhcCCCCC--Ch-HhCCCCCHHHHHcCCHHHHHH--HcCCCchHH--HHHHHHHHHhc
Confidence 4678999999999998 2344332 12 233 79999999999999976 211124555 88999999987
No 64
>1sxd_A GA repeat binding protein, alpha; alpha helical, transcription, signaling protein; NMR {Mus musculus} SCOP: a.60.1.1
Probab=96.57 E-value=0.00033 Score=57.28 Aligned_cols=64 Identities=22% Similarity=0.384 Sum_probs=48.0
Q ss_pred cccCCCCHHHHHHHHH----hcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 6 NFVLDWTSEQVANWLT----QKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 6 ~~v~~Ws~edV~~WL~----~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
.+...||.+||.+||. +.++++. ++ ...++||+.|..|+.+|+..- . ..|+ -|+..++.||+..
T Consensus 21 ~DP~~Ws~~~V~~WL~W~~~ef~L~~v--~~-~~f~m~G~~LC~ls~edF~~~--~--p~Gd--iL~~hL~~L~k~~ 88 (91)
T 1sxd_A 21 YDPIHWSTDQVLHWVVWVMKEFSMTDI--DL-TTLNISGRELCSLNQEDFFQR--V--PRGE--ILWSHLELLRKYV 88 (91)
T ss_dssp SSGGGCCHHHHHHHHHHHHHHTTCCCS--CS-GGGCSCHHHHHHSCHHHHHHH--C--TTCH--HHHHHHHHHHHTT
T ss_pred CChhhCCHHHHHHHHHHHHHccCCCCC--Ch-hhCCCCHHHHHcCCHHHHHHH--C--CCch--HHHHHHHHHHHhh
Confidence 5678999999999998 3444422 12 456799999999999999872 2 1254 6889999998765
No 65
>2jv3_A ETS1 proto-oncogene; ETS-1 pointed (PNT) domain, MAP kinase phosphorylation site, alpha-helical bundle, transcription factor, DNA-binding, nucleus; NMR {Mus musculus} PDB: 2kmd_A*
Probab=96.44 E-value=0.00039 Score=58.80 Aligned_cols=66 Identities=17% Similarity=0.252 Sum_probs=47.9
Q ss_pred cccCCCCHHHHHHHHH----hcCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 6 NFVLDWTSEQVANWLT----QKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 6 ~~v~~Ws~edV~~WL~----~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
.+...||.+||.+||+ +-++++. ++ ...++||+.|..|+.+|+.. ..-... ..-|+..++.||+.+
T Consensus 39 ~DP~~WS~~~V~~WL~W~~~ef~L~~v--~~-~~F~m~G~~LC~ls~edF~~--~~p~~~--GdiL~~hL~~Lk~~~ 108 (110)
T 2jv3_A 39 KDPRQWTETHVRDWVMWAVNEFSLKGV--DF-QKFCMSGAALCALGKECFLE--LAPDFV--GDILWEHLEILQKED 108 (110)
T ss_dssp SSSTTCCHHHHHHHHHHHHHHHTCCCC--CT-TTTCCCHHHHHHTHHHHHHH--HSCHHH--HHHHHHHHHHHHHTT
T ss_pred CChHhCCHHHHHHHHHHHHHhcCCCCC--Ch-hcCCCCHHHHHhCCHHHHHH--HcCCCc--HHHHHHHHHHHHHhc
Confidence 5789999999999997 3344432 12 34579999999999999987 211112 455789999998864
No 66
>3idw_A Actin cytoskeleton-regulatory complex protein SLA; clathrin adaptor, endocytosis, SAM domain, yeast, actin-BIND membrane, endosome; 1.85A {Saccharomyces cerevisiae}
Probab=95.63 E-value=0.0038 Score=48.61 Aligned_cols=52 Identities=17% Similarity=0.349 Sum_probs=44.6
Q ss_pred HHHhcCC-----CchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHH
Q psy135 19 WLTQKGH-----GKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESF 74 (418)
Q Consensus 19 WL~~~G~-----~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~L 74 (418)
|..+-|. ++|+..| .+++||-..|..|+.+-|++ ||++ .||+-|+++.+++.
T Consensus 8 FFl~aGv~~~~c~rYA~~F-~~~ri~e~mL~Dl~~~~Lr~--LGi~-eGDIIrVmk~l~~k 64 (72)
T 3idw_A 8 FFLNCGVDVSNCQRYTINF-DREQLTEDMMPDINNSMLRT--LGLR-EGDIVRVMKHLDKK 64 (72)
T ss_dssp HHHHTTCCHHHHHHHHHHH-HHTTCCGGGGGGCCHHHHHH--TTCC-HHHHHHHHHHHHHH
T ss_pred HHHHcCCChHHHHHHHHHH-HHccCCHHHHhhCCHHHHHH--cCCc-hhhHHHHHHHHHHH
Confidence 4445555 4699999 79999999999999999999 9996 79999999888765
No 67
>2ipb_A PHON protein, class A nonspecific acid phosphatase PHON; class-A bacterial non-specific acid phosphatase; 2.23A {Salmonella typhimurium} PDB: 2a96_A 2akc_A
Probab=95.26 E-value=0.025 Score=52.82 Aligned_cols=65 Identities=17% Similarity=0.118 Sum_probs=47.1
Q ss_pred eecchhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHHhcCccceehhhHHHHHHHHHHHHHHh
Q psy135 283 LFSGHTTAVTFLNFFITEYTPNTQIFYVLHLLAWVVNILAIGCILASHEHYSIDVFIAFYITSRLFLYYHS 353 (418)
Q Consensus 283 iFSGHT~~ltl~~l~i~eYsp~~~~~~~l~~i~~~l~~~g~~~Il~sr~HYTVDV~iA~~it~~lf~~YH~ 353 (418)
+-||||+..+..+.++..+.|++ ... .++++....+.=+....||--||+.|..++..+....|.
T Consensus 134 FPSGHa~~a~a~a~~l~~~~~~~--~~~----~~~~a~~v~~SRv~~G~H~~sDVlaG~~lG~~~~~~~~~ 198 (230)
T 2ipb_A 134 YPSGHDAYSTLLALVLSQARPER--AQE----LARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLQT 198 (230)
T ss_dssp SSCHHHHHHHHHHHHHHHHCGGG--HHH----HHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHTT
T ss_pred cChHHHHHHHHHHHHHHHHHHHH--HHH----HHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHc
Confidence 67999999988888777777765 321 123334444444567889999999999999988766553
No 68
>2qb0_B Telsam domain - lysozyme chimera; helical polymer, hydrolase regulator; 2.56A {Escherichia coli}
Probab=95.21 E-value=0.0041 Score=59.12 Aligned_cols=65 Identities=18% Similarity=0.279 Sum_probs=46.9
Q ss_pred cccCCCCHHHHHHHHHh----cCCCchHHHHhHhcCCCccccccCCccccCCCCCCccccchHHHHHHHHHHHHHHh
Q psy135 6 NFVLDWTSEQVANWLTQ----KGHGKYAPLLCDQHRLDGRGLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEI 78 (418)
Q Consensus 6 ~~v~~Ws~edV~~WL~~----~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~ 78 (418)
.+..+||.+||++||+- -.++.. .+ ..-.+||+.|+.|+.+|+.+- -. .. ..-|+..++.|+++.
T Consensus 10 ~dP~~Wt~~~V~~Wl~w~~~~f~l~~~--~~-~~f~~~G~~Lc~m~~~~F~~~-~p--~~--G~iL~~hl~~l~k~~ 78 (241)
T 2qb0_B 10 LQPIYWSRDDVAQWLKWAENEFSLRPI--DS-NTFEMNGKALLLLTKEDFRYR-SP--HS--GDVLYELLQHILKQA 78 (241)
T ss_dssp SCGGGCCHHHHHHHHHHHHHHTTCSCC--CT-TTTCSCHHHHTTCCHHHHHHH-CT--TT--HHHHHHHHHHHHHTC
T ss_pred CChhhCCHHHHHHHHHHHHHhcCCCCC--CH-HhcCCChHHHHHcCHHHHHhh-cC--Cc--chhhHHHHHHHHHhh
Confidence 56789999999999983 344332 12 344599999999999999862 11 23 456788888887766
No 69
>1dxs_A P53-like transcription factor; P73 SAM-like domain, gene regulation, P53 P63 homologue, sterIle alpha motif, tumour supressor; 2.54A {Homo sapiens} SCOP: a.60.1.2 PDB: 1cok_A
Probab=94.98 E-value=0.0099 Score=47.08 Aligned_cols=62 Identities=19% Similarity=0.176 Sum_probs=46.1
Q ss_pred HHHHHHHhcCCCchHHHHhHhcCCCcc-ccccCCccccCCCCCCccccchHHHHHHHHHHHHHHhhh
Q psy135 15 QVANWLTQKGHGKYAPLLCDQHRLDGR-GLFLLHEEDLKSPPISIEILGDIKRIIYDIESFKKEIHN 80 (418)
Q Consensus 15 dV~~WL~~~G~~ey~~~f~~~~~IdG~-~LL~Lte~DLk~~plgi~s~G~rkrl~~~I~~Lr~~~~~ 80 (418)
.|+.||...|++.|++.| .+++..-. -|-.++-|||.. |.|- -.+|.++|+.+-++|+.++.
T Consensus 8 Sv~s~Lt~LGc~~~Id~F-~~qgl~~i~qL~~~~ledL~~--mkIp-e~~R~kIWk~l~e~~q~~~~ 70 (80)
T 1dxs_A 8 SLVSFLTGLGCPNCIEYF-TSQGLQSIYHLQNLTIEDLGA--LKIP-EQYRMTIWRGLQDLKQGHDY 70 (80)
T ss_dssp CHHHHHHHTTCTTSHHHH-HTTTCCCHHHHHTCCHHHHHH--TTCC-TTTHHHHHHHHHHC------
T ss_pred cHHHHHHhcCchHHHHHH-HHcCcccchhhccCCHHHHHh--CCCC-HHHHHHHHhhHHHhccccCC
Confidence 489999999999999999 56665443 477899999999 4542 46899999999999987643
No 70
>1d2t_A Acid phosphatase; all alpha, hydrolase; 1.90A {Escherichia blattae} SCOP: a.111.1.1 PDB: 1eoi_A 1iw8_A
Probab=94.78 E-value=0.042 Score=51.38 Aligned_cols=67 Identities=18% Similarity=0.041 Sum_probs=47.4
Q ss_pred ceecchhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHHhcCccceehhhHHHHHHHHHHHHHHhh
Q psy135 282 YLFSGHTTAVTFLNFFITEYTPNTQIFYVLHLLAWVVNILAIGCILASHEHYSIDVFIAFYITSRLFLYYHSL 354 (418)
Q Consensus 282 liFSGHT~~ltl~~l~i~eYsp~~~~~~~l~~i~~~l~~~g~~~Il~sr~HYTVDV~iA~~it~~lf~~YH~l 354 (418)
=+-||||+..+..+.++..+.|++ .+ ....++....+.=+....||--||+.|..++..+....|.-
T Consensus 145 SFPSGHa~~a~a~a~~l~~~~~~~--~~----~~~~~a~~v~~SRvylGvH~psDVlaG~~lG~~~~~~~~~~ 211 (231)
T 1d2t_A 145 SYPSGHTSIGWATALVLAEINPQR--QN----EILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATLHTN 211 (231)
T ss_dssp CSSCHHHHHHHHHHHHHHHHCGGG--HH----HHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCChHHHHHHHHHHHHHHHHHHHH--HH----HHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHcC
Confidence 477999999988887777777755 21 12233333344445678899999999999999887665543
No 71
>2h80_A STAR-related lipid transfer protein 13; helical bundle, lipid binding protein; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2jw2_A
Probab=90.64 E-value=0.071 Score=41.84 Aligned_cols=23 Identities=26% Similarity=0.696 Sum_probs=19.8
Q ss_pred HHHHHHHHHhcCCCchHHHHhHhc
Q psy135 13 SEQVANWLTQKGHGKYAPLLCDQH 36 (418)
Q Consensus 13 ~edV~~WL~~~G~~ey~~~f~~~~ 36 (418)
..|.|+||+.-||++|++.| ++.
T Consensus 21 A~eAC~WLRaaGFPQYAqly-ed~ 43 (81)
T 2h80_A 21 AKEACDWLRAAGFPQYAQLY-EDS 43 (81)
T ss_dssp HHHHHHHHHHTTCHHHHHTT-TTT
T ss_pred HHHHHHHHHHcCCcHHHHHh-hcc
Confidence 46899999999999999988 444
No 72
>2dky_A RHO-GTPase-activating protein 7; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2gyt_A 2kap_A
Probab=89.14 E-value=0.24 Score=39.63 Aligned_cols=23 Identities=26% Similarity=0.704 Sum_probs=19.9
Q ss_pred HHHHHHHHHhcCCCchHHHHhHhc
Q psy135 13 SEQVANWLTQKGHGKYAPLLCDQH 36 (418)
Q Consensus 13 ~edV~~WL~~~G~~ey~~~f~~~~ 36 (418)
..|.|+||+.-||++|++.+ ++.
T Consensus 23 A~eAC~WLRaaGFPQYAqly-ed~ 45 (91)
T 2dky_A 23 AKEACDWLRATGFPQYAQLY-EDF 45 (91)
T ss_dssp HHHHHHHHHHHTCTTHHHHH-HTT
T ss_pred HHHHHHHHHHcCChHHHHhc-ccc
Confidence 46899999999999999988 544
No 73
>1up8_A Vanadium-dependent bromoperoxidase 1; haloperoxidase, vanadate; 2.20A {Corallina pilulifera} SCOP: a.111.1.2 PDB: 1qhb_A
Probab=45.24 E-value=33 Score=36.54 Aligned_cols=67 Identities=10% Similarity=-0.047 Sum_probs=43.2
Q ss_pred eecchhHHHHHHHHHHHhcCCCchhHH---------------H--------HHHHHHHHHHHHHHHHHhcCccceehhhH
Q psy135 283 LFSGHTTAVTFLNFFITEYTPNTQIFY---------------V--------LHLLAWVVNILAIGCILASHEHYSIDVFI 339 (418)
Q Consensus 283 iFSGHT~~ltl~~l~i~eYsp~~~~~~---------------~--------l~~i~~~l~~~g~~~Il~sr~HYTVDV~i 339 (418)
.=|||+++...++..+..+.+.. .. + +......++....+-=+..-.||--||+.
T Consensus 483 YPSGHAt~S~A~A~vL~~lf~~~--~~~~~~~~~~~~G~~R~~p~~g~~ltv~~sl~~lA~eig~SRVYlGVHypSDVlA 560 (598)
T 1up8_A 483 YGSGHAVVAGACVTILKAFFDSG--IEIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIGRNMAGVHYFSDQFE 560 (598)
T ss_dssp SSCHHHHHHHHHHHHHHHHBTTT--CBCSCCEEECSSSSSEEECCCCSCCBHHHHHHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHhccc--cccccccccccCcccccccccccchhHHHHHHHHHHHHHHHhheeeeecHHHHHH
Confidence 34999999888877777665543 10 0 01122333344444445677899999999
Q ss_pred HHHHHHHHHHHH
Q psy135 340 AFYITSRLFLYY 351 (418)
Q Consensus 340 A~~it~~lf~~Y 351 (418)
|+.+...+-.+-
T Consensus 561 G~~LG~aVa~~v 572 (598)
T 1up8_A 561 SLLLGEQVAIGI 572 (598)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999998876533
No 74
>2p2u_A HOST-nuclease inhibitor protein GAM, putative; structural genomics, unknown function, PSI-2, protein structure initiative; 2.75A {Desulfovibrio vulgaris} SCOP: h.4.18.1
Probab=41.97 E-value=7.5 Score=34.70 Aligned_cols=41 Identities=15% Similarity=0.084 Sum_probs=32.4
Q ss_pred CCCHHHHHHHHHhcCCCchHHHHhHhcCCCccccccCCccccCC
Q psy135 10 DWTSEQVANWLTQKGHGKYAPLLCDQHRLDGRGLFLLHEEDLKS 53 (418)
Q Consensus 10 ~Ws~edV~~WL~~~G~~ey~~~f~~~~~IdG~~LL~Lte~DLk~ 53 (418)
.|+.++|.+||++.|+.+|+. .+.++|=.+|+...++.+..
T Consensus 106 ~~~~~~vle~Lk~~gl~~~Ir---~keevnK~al~~~~~~~~~~ 146 (171)
T 2p2u_A 106 KITKDMTLERLRQFGISEGIR---IKEDVNKEAMQGWPDERLEM 146 (171)
T ss_dssp TCCHHHHHHHHHHTTCCTTCC---CCCCCCHHHHTTSCHHHHHH
T ss_pred cCCHHHHHHHHHHCCcHhhee---eccccCHHHHhcCcccceee
Confidence 489999999999999998876 35788888888866544433
No 75
>1qi9_A Protein (vanadium bromoperoxidase); haloperoxidase, oxidoreductase; 2.05A {Ascophyllum nodosum} SCOP: a.111.1.2
Probab=34.39 E-value=39 Score=35.66 Aligned_cols=29 Identities=10% Similarity=0.015 Sum_probs=22.2
Q ss_pred HHHHHHhcCccceehhhHHHHHHHHHHHH
Q psy135 322 AIGCILASHEHYSIDVFIAFYITSRLFLY 350 (418)
Q Consensus 322 g~~~Il~sr~HYTVDV~iA~~it~~lf~~ 350 (418)
..+.=+..-.||--||+.|+.++..+-..
T Consensus 476 Ig~SRVYlGVHYPSDVlaG~lLG~~va~~ 504 (556)
T 1qi9_A 476 VAFGRQMLGIHYRFDGIQGLLLGETITVR 504 (556)
T ss_dssp HHHHHHHTTSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHeeCccCHHHHHHHHHHHHHHHHH
Confidence 33444567789999999999999877643
No 76
>2a2p_A Selenoprotein M, SELM protein; redox enzyme, oxidoreductase; NMR {Mus musculus} SCOP: c.47.1.23
Probab=30.68 E-value=24 Score=30.24 Aligned_cols=24 Identities=8% Similarity=0.101 Sum_probs=20.8
Q ss_pred cccCCCCHHHHHHHHHhcCCCchH
Q psy135 6 NFVLDWTSEQVANWLTQKGHGKYA 29 (418)
Q Consensus 6 ~~v~~Ws~edV~~WL~~~G~~ey~ 29 (418)
.++.+|+.|+|.+.|++.||-+-+
T Consensus 72 I~Iekw~~d~I~efL~e~GF~rk~ 95 (129)
T 2a2p_A 72 IPLSQMTRDEINALVQELGFYRKS 95 (129)
T ss_dssp EECSSSCHHHHHHHHHHHTCCBCS
T ss_pred eecccCCHHHHHHHHHHcCCcccc
Confidence 478999999999999999996543
Done!