BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13500
(396 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 100/193 (51%), Gaps = 18/193 (9%)
Query: 64 IVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKFL-ADAAGTYF 122
+V DL N R T+IHWHGL QR T DG V QCPI G+ F YKF A AGT++
Sbjct: 48 VVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFW 107
Query: 123 WHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTSDERWPGLR 182
+HSH G Q DG+ G ++I +DP++ Y+ D+ + ++ + DWYH P
Sbjct: 108 YHSHFGTQYCDGLRGPMVIYD--DNDPHAALYDEDDENTIITLADWYH-------IPAPS 158
Query: 183 LHDVGQLPDTFLINGKGSYPVKGERYDFVIETSKAVSSYWIHIKGLGPCEDNKPF----- 237
+ Q PD LINGKG Y V G + I + Y + + L C+ N F
Sbjct: 159 IQGAAQ-PDATLINGKGRY-VGGPAAELSIVNVEQGKKYRMRLISLS-CDPNWQFSIDGH 215
Query: 238 QLGVLKYDGSLFQ 250
+L +++ DG L +
Sbjct: 216 ELTIIEVDGELTE 228
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 205 GERYDFVIETSKAVSSYWIHIK------GLGPCEDNKPFQLGVLKYDGSLFQKPPSS 255
G+RY FV++ ++ V +YWI + GL N +L+Y G+ P +S
Sbjct: 240 GQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANG-VNSAILRYAGAANADPTTS 295
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 100/193 (51%), Gaps = 18/193 (9%)
Query: 64 IVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKFL-ADAAGTYF 122
+V DL N R T+IHWHGL QR T DG V QCPI G+ F YKF A AGT++
Sbjct: 48 VVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFW 107
Query: 123 WHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTSDERWPGLR 182
+HSH G Q DG+ G ++I +DP++ Y+ D+ + ++ + DWYH P
Sbjct: 108 YHSHFGTQYCDGLRGPMVIYD--DNDPHAALYDEDDENTIITLADWYH-------IPAPS 158
Query: 183 LHDVGQLPDTFLINGKGSYPVKGERYDFVIETSKAVSSYWIHIKGLGPCEDNKPF----- 237
+ Q PD LINGKG Y V G + I + Y + + L C+ N F
Sbjct: 159 IQGAAQ-PDATLINGKGRY-VGGPAAELSIVNVEQGKKYRMRLISLS-CDPNWQFSIDGH 215
Query: 238 QLGVLKYDGSLFQ 250
+L +++ DG L +
Sbjct: 216 ELTIIEVDGELTE 228
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 205 GERYDFVIETSKAVSSYWIHIK------GLGPCEDNKPFQLGVLKYDGSLFQKPPSS 255
G+RY FV++ ++ V +YWI + GL N +L+Y G+ P +S
Sbjct: 240 GQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANG-VNSAILRYAGAANADPTTS 295
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 86/163 (52%), Gaps = 8/163 (4%)
Query: 61 GDTIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKFLADAAGT 120
GD++VV+L NK+ IHWHG+ QR TP DG ++QC I G F Y F D GT
Sbjct: 41 GDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGT 100
Query: 121 YFWHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTSDERWPG 180
+F+H H G Q+ G+ G+LI+ P+ + YD + +L++DW+H + + G
Sbjct: 101 FFYHGHLGMQRSAGLYGSLIVDPPQGK---KEPFHYDGEIN-LLLSDWWHQSIHKQE-VG 155
Query: 181 LRLHDVGQL--PDTFLINGKGSYPVK-GERYDFVIETSKAVSS 220
L + + P T L+NG+G + +YD +E K S
Sbjct: 156 LSSKPIRWIGEPQTILLNGRGQFDCSIAAKYDSNLEPCKLKGS 198
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 95/185 (51%), Gaps = 16/185 (8%)
Query: 60 KGDT----IVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKF-L 114
KGD ++ +L N ++TTIHWHGL Q T DG V QCPI GN F Y F +
Sbjct: 40 KGDNFQINVIDNLTNATMLKTTTIHWHGLFQHGTNWADGPAFVNQCPIASGNSFLYDFTV 99
Query: 115 ADAAGTYFWHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTS 174
D AGT+++HSH Q DG+ G L++ P SDP + Y+ D+ + V+ ++DWYH T+
Sbjct: 100 PDQAGTFWYHSHLSTQYCDGLRGPLVVYDP--SDPYASMYDVDDDTTVITLSDWYH--TA 155
Query: 175 DERWPGLRLHDVGQLPDTFLINGKGSYPVKGERYDFVIETSKAVSSYWIHIKGLGPCEDN 234
+ P + D+ LING G + G D + T + Y + L C+ N
Sbjct: 156 AKLGPAFPPN-----ADSVLINGLGRF-AGGNASDLAVITVEQNKRYRFRLVSLS-CDPN 208
Query: 235 KPFQL 239
F +
Sbjct: 209 FTFSI 213
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 97/210 (46%), Gaps = 24/210 (11%)
Query: 7 SRACGNCTSKGVCKGD-TIVVDLHNKMPGRSTTIHW----------HGLTQRLTPHMDGV 55
+ +C N + C G+ +I + ++ P T +W G T+ V
Sbjct: 36 TASCANSATSRSCWGEYSIDTNWYDVTPTGVTREYWLSVENSTITPDGYTRSAMTFNGTV 95
Query: 56 P----MVCKGDTIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRY 111
P + GD +++ + N + T+IHWHG+ Q + DGVP VTQCPI G+ Y
Sbjct: 96 PGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTY 155
Query: 112 KFLADAAGTYFWHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHN 171
KF GT ++HSH Q DG+ G LII P T+D YD V+ + DW H
Sbjct: 156 KFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPATAD-------YDEDVGVIFLQDWAHE 208
Query: 172 TTSDERWPGLRLHDVGQLPDTFLINGKGSY 201
+ E W RL L +T L+NG ++
Sbjct: 209 SVF-EIWDTARLGAPPALENT-LMNGTNTF 236
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 205 GERYDFVIETSKAVSSYWIHIKGLGPCEDNKPF--QLGVLKYDGSLFQKPPS 254
G+RYD ++E + A +YWI C N G+L+YD S P S
Sbjct: 308 GQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTS 359
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 97/210 (46%), Gaps = 24/210 (11%)
Query: 7 SRACGNCTSKGVCKGD-TIVVDLHNKMPGRSTTIHW----------HGLTQRLTPHMDGV 55
+ +C N + C G+ +I + ++ P T +W G T+ V
Sbjct: 36 TASCANSATSRSCWGEYSIDTNWYDVTPTGVTREYWLSVENSTITPDGYTRSAMTFNGTV 95
Query: 56 P----MVCKGDTIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRY 111
P + GD +++ + N + T+IHWHG+ Q + DGVP VTQCPI G+ Y
Sbjct: 96 PGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTY 155
Query: 112 KFLADAAGTYFWHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHN 171
KF GT ++HSH Q DG+ G LII P T+D YD V+ + DW H
Sbjct: 156 KFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPATAD-------YDEDVGVIFLQDWAHE 208
Query: 172 TTSDERWPGLRLHDVGQLPDTFLINGKGSY 201
+ E W RL L +T L+NG ++
Sbjct: 209 SVF-EIWDTARLGAPPALENT-LMNGTNTF 236
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 205 GERYDFVIETSKAVSSYWIHIKGLGPCEDNKPF--QLGVLKYDGSLFQKPPS 254
G+RYD ++E + A +YWI C N G+L+YD S P S
Sbjct: 308 GQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTS 359
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 81/161 (50%), Gaps = 24/161 (14%)
Query: 64 IVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKF-LADAAGTYF 122
++ +L N +ST+IHWHG Q T DG + QCPI G+ F Y F + D AGT++
Sbjct: 48 VIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFW 107
Query: 123 WHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTS-DERWPGL 181
+HSH Q DG+ G ++ P +DP++ Y+ DN V+ + DWYH R+PG
Sbjct: 108 YHSHLSTQYCDGLRGPFVVYDP--NDPHASRYDVDNDDTVITLADWYHTAAKLGPRFPGG 165
Query: 182 RLHDVGQLPDTFLINGKGSYP------------VKGERYDF 210
D LINGKG P KG+RY F
Sbjct: 166 A--------DATLINGKGRAPSDSVAELSVIKVTKGKRYRF 198
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 81/161 (50%), Gaps = 24/161 (14%)
Query: 64 IVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKF-LADAAGTYF 122
++ +L N +ST+IHWHG Q T DG + QCPI G+ F Y F + D AGT++
Sbjct: 48 VIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFW 107
Query: 123 WHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTS-DERWPGL 181
+HSH Q DG+ G ++ P +DP++ Y+ DN V+ + DWYH R+PG
Sbjct: 108 YHSHLSTQYCDGLRGPFVVYDP--NDPHASRYDVDNDDTVITLADWYHTAAKLGPRFPGG 165
Query: 182 RLHDVGQLPDTFLINGKGSYP------------VKGERYDF 210
D LINGKG P KG+RY F
Sbjct: 166 A--------DATLINGKGRAPSDSVAELSVIKVTKGKRYRF 198
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 106/244 (43%), Gaps = 57/244 (23%)
Query: 64 IVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKF-LADAAGTYF 122
++ +L N +ST+IHWHG Q+ T DG + QCPI G+ F Y F + D AGT++
Sbjct: 48 VIDNLTNHTMLKSTSIHWHGFFQKGTNWADGPAFINQCPISSGHSFLYDFQVPDQAGTFW 107
Query: 123 WHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYH------------ 170
+HSH Q DG+ G ++ P +DP + Y+ DN V+ + DWYH
Sbjct: 108 YHSHLSTQYCDGLRGPFVVYDP--NDPAADLYDVDNDDTVITLVDWYHVAAKLGPAFPLG 165
Query: 171 --------------NTTSD----ERWPG----LRLHDVGQLPD-TFLINGKGSYPVK--- 204
TT+D PG RL + P+ TF I+G ++
Sbjct: 166 ADATLINGKGRSPSTTTADLSVISVTPGKRYRFRLVSLSCDPNYTFSIDGHNMTIIETDS 225
Query: 205 ---------------GERYDFVIETSKAVSSYWIHIK-GLGPCEDNKPFQLGVLKYDGSL 248
+RY FV+E ++AV +YWI G +L+YDG+
Sbjct: 226 INTAPLVVDSIQIFAAQRYSFVLEANQAVDNYWIRANPNFGNVGFTGGINSAILRYDGAA 285
Query: 249 FQKP 252
+P
Sbjct: 286 AVEP 289
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 88/217 (40%), Gaps = 62/217 (28%)
Query: 24 IVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVCKGDTIVVDLHNKMPGRSTTIHWHG 83
++ +L N +ST+IHWHG Q+ T +W
Sbjct: 48 VIDNLTNHTMLKSTSIHWHGFFQKGT------------------------------NW-- 75
Query: 84 LTQRLTPHMDGVPMVTQCPILEGNVFRYKF-LADAAGTYFWHSHDGFQKMDGIIGNLIIR 142
DG + QCPI G+ F Y F + D AGT+++HSH Q DG+ G ++
Sbjct: 76 --------ADGPAFINQCPISSGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVY 127
Query: 143 QPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTSDERWPGLRLHDVGQLPDTFLINGKGSYP 202
P +DP + Y+ DN V+ + DWYH + + P L D LINGKG P
Sbjct: 128 DP--NDPAADLYDVDNDDTVITLVDWYH--VAAKLGPAFPLG-----ADATLINGKGRSP 178
Query: 203 ------------VKGERYDFVIETSKAVSSYWIHIKG 227
G+RY F + + +Y I G
Sbjct: 179 STTTADLSVISVTPGKRYRFRLVSLSCDPNYTFSIDG 215
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 90/185 (48%), Gaps = 26/185 (14%)
Query: 60 KGD----TIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKF-L 114
KGD +V L N +ST+IHWHG Q T DG V QCPI G+ F Y F +
Sbjct: 40 KGDRFQLNVVDTLTNHTMLKSTSIHWHGFFQAGTNWADGPAFVNQCPIASGHSFLYDFHV 99
Query: 115 ADAAGTYFWHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTS 174
D AGT+++HSH Q DG+ G ++ P+ DP++ Y+ DN S V+ +TDWYH T+
Sbjct: 100 PDQAGTFWYHSHLSTQYCDGLRGPFVVYDPK--DPHASRYDVDNESTVITLTDWYH--TA 155
Query: 175 DERWPGLRLHDVGQLPDTFLINGKG---SYPVK---------GERYDFVIETSKAVSSYW 222
P L D LING G S P G+RY F + + +Y
Sbjct: 156 ARLGPRFPLG-----ADATLINGLGRSASTPTAALAVINVQHGKRYRFRLVSISCDPNYT 210
Query: 223 IHIKG 227
I G
Sbjct: 211 FSIDG 215
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 96/197 (48%), Gaps = 23/197 (11%)
Query: 61 GDTIVVDLHNKMPG----RSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKF-LA 115
GD ++L N+M ++T+IHWHG Q+ T DG + QCPI GN F Y F +
Sbjct: 41 GDNFQLNLVNQMTNHTMLKTTSIHWHGFFQKGTNWADGPAFINQCPIASGNSFLYDFQVP 100
Query: 116 DAAGTYFWHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTS- 174
AGT+++HSH Q DG+ G ++ P +DP++ Y+ D+ S V+ + DWYH
Sbjct: 101 GQAGTFWYHSHLSTQYCDGLRGPFVVYDP--NDPHANLYDVDDESTVITLADWYHVAAKL 158
Query: 175 DERWPGLRLHDVGQLPDTFLINGKGSYPVKGERYDFVIETSKAVSSYWIHIKGLGPCEDN 234
R+P + D+ LING G VI +K Y + L C+ N
Sbjct: 159 GPRFP--------KGADSTLINGLGRSTSTPTADLAVISVTKG-KRYRFRLVSLS-CDPN 208
Query: 235 KPF-----QLGVLKYDG 246
F QL V++ DG
Sbjct: 209 YTFSIDSHQLTVIEADG 225
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 81/167 (48%), Gaps = 19/167 (11%)
Query: 75 RSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKFLA-DAAGTYFWHSHDGFQKMD 133
R+T+IHWHG Q T MDG V QCPI+ F Y F+ AGTY++HSH Q D
Sbjct: 80 RATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCD 139
Query: 134 GIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTSDERWPGLRLHDVGQLPDTF 193
G+ G ++ P +DP+ Y+ D+ S V+ + DWYH+ ++ + PDT
Sbjct: 140 GLRGAFVVYDP--NDPHLSLYDVDDASTVITIADWYHSLSTVLF---PNPNKAPPAPDTT 194
Query: 194 LINGKGSYPV-------------KGERYDFVIETSKAVSSYWIHIKG 227
LING G G+RY F I ++ +Y I G
Sbjct: 195 LINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDG 241
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 23/81 (28%)
Query: 204 KGERYDFVIETSKAVSSYWIHIKGLGPCEDNKPFQLG----VLKYDGSLFQKPPSS---- 255
G+RY V+E ++AV +YWI P F G + +Y G+ +P +S
Sbjct: 266 AGQRYSVVVEANQAVGNYWIRAN---PSNGRNGFTGGINSAIFRYQGAAVAEPTTSQNSG 322
Query: 256 ------------NPGYKGYPV 264
NPG G PV
Sbjct: 323 TALNEANLIPLINPGAPGNPV 343
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 88/186 (47%), Gaps = 28/186 (15%)
Query: 60 KGDTIVVDLHNKMPG----RSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKFLA 115
KGD +++ N + +ST++HWHG Q+ T DG V QCPI G+ F Y F
Sbjct: 40 KGDQFQLNVINNLTNFTMLKSTSVHWHGFFQKGTNWADGPAFVNQCPIAAGSSFLYDFST 99
Query: 116 D-AAGTYFWHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTS 174
AGT+++HSH Q DG G ++ P DP++ Y+ DN + V+ +TDWYH
Sbjct: 100 PIQAGTFWYHSHLSTQYCDGDRGPFVVYDPN--DPSANLYDVDNLNTVITLTDWYHTAAQ 157
Query: 175 DE-RWPGLRLHDVGQLPDTFLINGKGSYP------------VKGERYDFVIETSKAVSSY 221
+ PG D LING+G P G+RY F + ++ +Y
Sbjct: 158 NGPAKPGGA--------DATLINGQGRGPSSPSADLAVISVTAGKRYRFRLVSNSCDPNY 209
Query: 222 WIHIKG 227
I G
Sbjct: 210 TFSIDG 215
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 105/274 (38%), Gaps = 59/274 (21%)
Query: 20 KGDTIVVDLHNKMPG----RSTTIHWHGLTQRLTPHMDGVPMV-----CKGDTIVVDLHN 70
KGD +++ N + +ST++HWHG Q+ T DG V G + + D
Sbjct: 40 KGDQFQLNVINNLTNFTMLKSTSVHWHGFFQKGTNWADGPAFVNQCPIAAGSSFLYDFST 99
Query: 71 KMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCP-ILEGNVFRYKFLADAAGTYFWH---SH 126
+ + H H TQ D P V P N++ L W+ +
Sbjct: 100 PIQAGTFWYHSHLSTQYC--DGDRGPFVVYDPNDPSANLYDVDNLNTVITLTDWYHTAAQ 157
Query: 127 DGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTSDERWPGLRLHDV 186
+G K G LI Q R P+S PS + V + T+ +R+ R V
Sbjct: 158 NGPAKPGGADATLINGQGR--GPSS-------PSADLAVI----SVTAGKRY---RFRLV 201
Query: 187 GQLPD---TFLINGKGSYPVK------------------GERYDFVIETSKAVSSYWIHI 225
D TF I+G ++ +RY F++ ++AV++YWI
Sbjct: 202 SNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLKIQIYAAQRYSFILNANQAVNNYWIRA 261
Query: 226 KGLGPCEDNKPFQLG----VLKYDGSLFQKPPSS 255
P + N F G +L+Y G+ +P +S
Sbjct: 262 N---PNQGNVGFTNGINSAILRYSGAAATQPTTS 292
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 112/259 (43%), Gaps = 58/259 (22%)
Query: 64 IVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKF-LADAAGTYF 122
++ +L N ++T++HWHG Q+ T DG + QCPI G+ F Y F + + AGT++
Sbjct: 48 VIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPAFINQCPISPGHSFLYDFQVPNQAGTFW 107
Query: 123 WHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTS-DERWPG- 180
+HSH Q DG+ G ++ P +DP++ Y+ DN V+ + DWYH R+P
Sbjct: 108 YHSHLSTQYCDGLRGPFVVYDP--NDPHASRYDVDNDDTVITLADWYHTAAKLGPRFPAG 165
Query: 181 --------------------------------LRLHDVGQLPD-TFLING---------- 197
RL + P+ TF I+G
Sbjct: 166 ADATLINGKGRAPSDTSAELSVIKVTKGKRXRFRLVSLSCDPNFTFSIDGHNLTIIEVDS 225
Query: 198 KGSYPVK--------GERYDFVIETSKAVSSYWIHIK-GLGPCEDNKPFQLGVLKYDGSL 248
S P+ +RY FV+ ++AV +YWI G N +L+YDG+
Sbjct: 226 SNSQPLSVDSIQIFAAQRYSFVLNANQAVDNYWIRANPNFGNVGFNGGINSAILRYDGAP 285
Query: 249 FQKPPSSNPGYKGYPVNRI 267
+ P++N P+N +
Sbjct: 286 AVE-PTTNQTTSVKPLNEV 303
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 52/196 (26%)
Query: 24 IVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVCKGDTIVVDLHNKMPGRSTTIHWHG 83
++ +L N ++T++HWHG Q+ T +W
Sbjct: 48 VIDNLTNHTMLKTTSVHWHGFFQQGT------------------------------NW-- 75
Query: 84 LTQRLTPHMDGVPMVTQCPILEGNVFRYKF-LADAAGTYFWHSHDGFQKMDGIIGNLIIR 142
DG + QCPI G+ F Y F + + AGT+++HSH Q DG+ G ++
Sbjct: 76 --------ADGPAFINQCPISPGHSFLYDFQVPNQAGTFWYHSHLSTQYCDGLRGPFVVY 127
Query: 143 QPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTS-DERWPGLRLHDVGQLPDTFLINGKGSY 201
P +DP++ Y+ DN V+ + DWYH R+P D LINGKG
Sbjct: 128 DP--NDPHASRYDVDNDDTVITLADWYHTAAKLGPRFPAGA--------DATLINGKGRA 177
Query: 202 PVKGERYDFVIETSKA 217
P VI+ +K
Sbjct: 178 PSDTSAELSVIKVTKG 193
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 113/265 (42%), Gaps = 73/265 (27%)
Query: 60 KGD----TIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKF-L 114
KGD ++ ++ N +ST+IHWHG Q T DG V QCPI G+ F Y F +
Sbjct: 40 KGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPAFVNQCPISTGHAFLYDFQV 99
Query: 115 ADAAGTYFWHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYH---- 170
D AGT+++HSH Q DG+ G +++ P DP++ Y+ D+ S V+ + DWYH
Sbjct: 100 PDQAGTFWYHSHLSTQYCDGLRGPIVVYDPN--DPHASLYDVDDDSTVITLADWYHLAAK 157
Query: 171 ------------------------------NTTSDERWPGLRLHDVGQLPD-TFLINGKG 199
T +R+ RL + P+ TF I+G
Sbjct: 158 VGAPVPTADATLINGLGRSAATLAADLAVITVTKGKRY-RFRLVSLSCDPNYTFSIDGHS 216
Query: 200 SYPVK------------------GERYDFVIETSKAVSSYWIHIKGLGPCEDNKPFQLG- 240
++ +RY FV+ + V +YWI P + F G
Sbjct: 217 LTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQDVDNYWIRAL---PNSGTQNFAGGT 273
Query: 241 ---VLKYDGSLFQKP-----PSSNP 257
+L+YDG+ +P PS+NP
Sbjct: 274 NSAILRYDGAAPVEPTTSQTPSTNP 298
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 113/265 (42%), Gaps = 73/265 (27%)
Query: 60 KGD----TIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKF-L 114
KGD ++ ++ N +ST+IHWHG Q T DG V QCPI G+ F Y F +
Sbjct: 40 KGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPAFVNQCPISTGHAFLYDFQV 99
Query: 115 ADAAGTYFWHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYH---- 170
D AGT+++HSH Q DG+ G +++ P DP++ Y+ D+ S V+ + DWYH
Sbjct: 100 PDQAGTFWYHSHLSTQYCDGLRGPIVVYDPN--DPHASLYDVDDDSTVITLADWYHLAAK 157
Query: 171 ------------------------------NTTSDERWPGLRLHDVGQLPD-TFLINGKG 199
T +R+ RL + P+ TF I+G
Sbjct: 158 VGAPVPTADATLINGLGRSAATLAADLAVITVTKGKRY-RFRLVSLSCDPNYTFSIDGHS 216
Query: 200 SYPVK------------------GERYDFVIETSKAVSSYWIHIKGLGPCEDNKPFQLG- 240
++ +RY FV+ + V +YWI P + F G
Sbjct: 217 LTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQDVDNYWIRAL---PNSGTQNFAGGT 273
Query: 241 ---VLKYDGSLFQKP-----PSSNP 257
+L+YDG+ +P PS+NP
Sbjct: 274 NSAILRYDGAAPVEPTTSQTPSTNP 298
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 64 IVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKF-LADAAGTYF 122
++ +L N ++T++HWHG Q+ T DG + QCPI G+ F Y F + + AGT++
Sbjct: 48 VIDNLTNHTMLKTTSVHWHGFFQQGTNWADGPAFINQCPISPGHSFLYDFQVPNQAGTFW 107
Query: 123 WHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTSDERWPGLR 182
+HSH Q DG+ G ++ P DP++ Y+ DN + + DWYH T+ + P
Sbjct: 108 YHSHLSTQYCDGLRGPFVVYDPN--DPHASRYDVDNDDTTITLADWYH--TAAKLGPAFP 163
Query: 183 LHDVGQLPDTFLINGKGSYPVKGERYDFVIETSKA 217
D+ LINGKG P V+ +K
Sbjct: 164 -----NGADSTLINGKGRAPSDSSAQLSVVSVTKG 193
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 7/116 (6%)
Query: 60 KGD----TIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKF-L 114
KGD ++ ++ N +ST+IHWHG Q T DG V QCPI G+ F Y F +
Sbjct: 40 KGDRFQLNVIDNMTNHTMLKSTSIHWHGFFQHGTNWADGPAFVNQCPISTGHAFLYDFQV 99
Query: 115 ADAAGTYFWHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYH 170
D AGT+++HSH Q DG+ G +++ P+ DP+ Y+ D+ S V+ + DWYH
Sbjct: 100 PDQAGTFWYHSHLSTQYCDGLRGPIVVYDPQ--DPHKSLYDVDDDSTVITLADWYH 153
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 12/63 (19%)
Query: 204 KGERYDFVIETSKAVSSYWIHIKGLGPCEDNKPFQLGV----LKYDGSLFQKP-----PS 254
+RY FV+ + V +YWI P + F GV L+YDG+ +P PS
Sbjct: 239 AAQRYSFVLNADQDVGNYWIRAL---PNSGTRNFDGGVNSAILRYDGAAPVEPTTSQTPS 295
Query: 255 SNP 257
+NP
Sbjct: 296 TNP 298
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 10/164 (6%)
Query: 77 TTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKF-LADAAGTYFWHSHDGFQKMDGI 135
T+IHWHG Q+ T DG +TQCPI+ GN F Y F + AGTY++HSH Q DG+
Sbjct: 62 TSIHWHGEFQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGL 121
Query: 136 IGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTSDERWPGLRLHDVGQLPDTFLI 195
G ++ P DP++ Y+ D+ + ++ + DWYH + E G + D+ LI
Sbjct: 122 RGPFVVYDPN--DPDANLYDVDDDTTIITLADWYH-VLAKEMGAGGAI-----TADSTLI 173
Query: 196 NGKGSYPVKGERYDFVIETSKAVSSYWIHIKGLGPCEDNKPFQL 239
+G G V + T + Y + + + C+ N F +
Sbjct: 174 DGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSIS-CDPNYDFSI 216
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
Query: 204 KGERYDFVIETSKAVSSYWIHIKGLGPCEDNKPFQLG----VLKYDGSLFQKP 252
+RY FV+ ++ V +YWI P + F G +L+YDG+ P
Sbjct: 243 AAQRYSFVLNANQPVGNYWIRAN---PNSGGEGFDGGINSAILRYDGATTADP 292
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 68/119 (57%), Gaps = 8/119 (6%)
Query: 58 VCKGDTIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKFLADA 117
V KGD + + L N M +T++H+HGL Q T MDGVP +TQCPI G+ Y F D
Sbjct: 38 VNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDY 97
Query: 118 -AGTYFWHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTSD 175
GTY++HSH Q DG+ G II+ +S Y+YD + L ++WYH+ +D
Sbjct: 98 NVGTYWYHSHTDGQYEDGMKGLFIIKD------DSFPYDYDEELSLSL-SEWYHDLVTD 149
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 77/146 (52%), Gaps = 16/146 (10%)
Query: 60 KGD----TIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKF-L 114
KGD ++ L N ++++IHWHG Q+ T DG V QCPI G+ F Y F +
Sbjct: 40 KGDRFQLNVIDQLTNHTMLKTSSIHWHGFFQQGTNWADGPAFVNQCPIASGHSFLYDFQV 99
Query: 115 ADAAGTYFWHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTS 174
D AGT+++HSH Q DG+ G ++ P +DP++ Y+ DN V+ + DWYH
Sbjct: 100 PDQAGTFWYHSHLSTQYCDGLRGPFVVYDP--NDPHASLYDIDNDDTVITLADWYHVAAK 157
Query: 175 -DERWPGLRLHDVGQLPDTFLINGKG 199
R+P G D+ LING G
Sbjct: 158 LGPRFP------FGS--DSTLINGLG 175
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Query: 204 KGERYDFVIETSKAVSSYWIHIKGLGPCEDNKPFQLG----VLKYDGSLFQKPPS 254
+RY FV++ S+ V +YWI P N F G +L+YDG+ +P S
Sbjct: 240 AAQRYSFVLDASQPVDNYWIRAN---PAFGNTGFAGGINSAILRYDGAPEIEPTS 291
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 61 GDTIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPI-LEGNVFRYKFLADAAG 119
GDT+ V + N + T+IHWHG+ Q+ T DG VT+CPI +G Y++ A G
Sbjct: 74 GDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYG 133
Query: 120 TYFWHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTSDERWP 179
T ++HSH Q +G++G + I P + YD V +TD+Y+ D
Sbjct: 134 TSWYHSHFSAQYGNGVVGTIQINGPAS-------LPYDIDLGVFPITDYYYRAADDLV-- 184
Query: 180 GLRLHDVGQLPDTFLINGKGSYPVKGE 206
++ D LING P GE
Sbjct: 185 HFTQNNAPPFSDNVLINGTAVNPNTGE 211
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 205 GERYDFVIETSKAVSSYWIHIK--GLGPCEDN-KPFQLGVLKYDGS 247
G+RYD VI+ S+A +YW ++ G C + P + Y G+
Sbjct: 270 GQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGA 315
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 15/160 (9%)
Query: 58 VCKGDTIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKFLADA 117
V +GD + V++ N M TIHWHG+ QR T DGVP TQ I G+ F YKF A+
Sbjct: 38 VMEGDDVTVNVTN-MTTLPHTIHWHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKAEP 96
Query: 118 AGTYFWHSHDGFQK---MDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTS 174
AGT ++H H + M G+ G LI+ +P+ P + D ++++++DW + +
Sbjct: 97 AGTMWYHCHVNVNEHVTMRGMWGPLIV-EPKNPLPIEKTVTKD---YILMLSDWVSSWAN 152
Query: 175 DERWPGLRLHDVGQLPDTFLINGKG---SYPVKGERYDFV 211
G+ G + D + IN K + P++ ++ D +
Sbjct: 153 KPGEGGIP----GDVFDYYTINAKSFPETQPIRVKKGDVI 188
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 103/258 (39%), Gaps = 59/258 (22%)
Query: 61 GDTIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPI-LEGNVFRYKFLADAAG 119
GD I V + N + T++HWHGL Q DG VT+CPI +G YKF A G
Sbjct: 115 GDNIEVTVINNLKTNGTSMHWHGLRQLGNVFNDGANGVTECPIPPKGGRKTYKFRATQYG 174
Query: 120 TYFWHSHDGFQKMDGIIGNLIIRQP-------------------RTSDPNSRYYEYDN-- 158
T ++HSH Q +G++G + I P R++D + + +
Sbjct: 175 TSWYHSHFSAQYGNGVVGTIQIDGPASLPYDIDLGVFPLMDYYYRSADELVHFTQSNGAP 234
Query: 159 PSHVVLVT-----------DWYHNTTSDERWPGLRL--------HDVGQLPDTFLINGKG 199
PS VL WY+ T + + LR+ V + +
Sbjct: 235 PSDNVLFNGTARHPETGAGQWYNVTLTPGKRHRLRIINTSTDNHFQVSLVGHNMTVIATD 294
Query: 200 SYPVK-----------GERYDFVIETSKAVSSYWIHIK-GLGPC-EDNKPFQLGVLKYDG 246
PV G+RYD I+ + V +YW ++ G G C N F + +Y G
Sbjct: 295 MVPVNAFTVSSLFLAVGQRYDVTIDANSPVGNYWFNVTFGDGLCGSSNNKFPAAIFRYQG 354
Query: 247 SLFQKPPSSNPGYKGYPV 264
+ P++ P +G PV
Sbjct: 355 A-----PATLPTDQGLPV 367
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 61 GDTIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPI-LEGNVFRYKFLADAAG 119
GDT+ V + N + T+IHWHG+ Q+ T DG VT+CPI +G Y++ A G
Sbjct: 74 GDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYG 133
Query: 120 TYFWHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTSDERWP 179
T ++HSH Q +G++G + I P + YD V +TD+Y+ D
Sbjct: 134 TSWYHSHFSAQYGNGVVGTIQINGPAS-------LPYDIDLGVFPITDYYYRAADDLV-- 184
Query: 180 GLRLHDVGQLPDTFLINGKGSYPVKGE 206
++ D LING P GE
Sbjct: 185 HFTQNNAPPFSDNVLINGTAVNPNTGE 211
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 205 GERYDFVIETSKAVSSYWIHIK--GLGPCEDN-KPFQLGVLKYDGS 247
G+RYD VI+ S+A +YW ++ G C + P + Y G+
Sbjct: 270 GQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGA 315
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 61 GDTIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPI-LEGNVFRYKFLADAAG 119
GDT+ V + N + T+IHWHG+ Q+ T DG VT+CPI +G Y++ A G
Sbjct: 74 GDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYG 133
Query: 120 TYFWHSHDGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTSDERWP 179
T ++HSH Q +G++G + I P + YD V +TD+Y+ D
Sbjct: 134 TSWYHSHFSAQYGNGVVGTIQINGPAS-------LPYDIDLGVFPITDYYYRAADDLV-- 184
Query: 180 GLRLHDVGQLPDTFLINGKGSYPVKGE 206
++ D LING P GE
Sbjct: 185 HFTQNNAPPFSDNVLINGTAVNPNTGE 211
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 205 GERYDFVIETSKAVSSYWIHIK--GLGPCEDN-KPFQLGVLKYDGS 247
G+RYD VI+ S+A +YW ++ G C + P + Y G+
Sbjct: 270 GQRYDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGA 315
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 35/150 (23%)
Query: 58 VCKGDTIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGN--VFRYKFLA 115
V +GD + + + NK+ +TTIHWHG+ + P DG P PIL G ++R++
Sbjct: 86 VFEGDKLEILVKNKLK-EATTIHWHGVP--VPPDQDGSP---HDPILAGEERIYRFEIPQ 139
Query: 116 DAAGTYFWHSHDGF----QKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHN 171
D+AGTY++H H + Q G+ G +I+ + D S E D ++++D
Sbjct: 140 DSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKK--DALSHLKEKD-----LMISD---- 188
Query: 172 TTSDERWPGLRLHDVGQLPDTFL---INGK 198
LRL + Q+P+ L +NG+
Sbjct: 189 ---------LRLDENAQIPNNNLNDWLNGR 209
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 23/115 (20%)
Query: 62 DTIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILE---GNVFRYKFLA--D 116
DT+ + L N++P T +HWHGL ++P +D P LE G + Y+F +
Sbjct: 55 DTVRLTLENRLP-EPTNLHWHGLP--ISPKVDD-------PFLEIPPGESWTYEFTVPKE 104
Query: 117 AAGTYFWHSH----DGFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTD 167
AGT+++H H Q G++G L++ + P R E H++++ D
Sbjct: 105 LAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPELREAE----EHLLVLKD 155
>pdb|3GDC|A Chain A, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|B Chain B, Crystal Structure Of Multicopper Oxidase
pdb|3GDC|C Chain C, Crystal Structure Of Multicopper Oxidase
Length = 288
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 24/155 (15%)
Query: 60 KGDTIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKFLADAAG 119
+GD + + N TIH+HG+ R T MDG P + I G F Y+F A G
Sbjct: 72 EGDALRIHFTNA-GAHPHTIHFHGV-HRAT--MDGTPGIGAGSIAPGQSFTYEFDATPFG 127
Query: 120 TYFWHSHD---GFQKMDGIIGNLIIRQPRTSDPNSRYYEYDNPSHVVLVTDWYHNTTSDE 176
T+ +H H G+ G I+ +P+ P + +V+V + Y+ D+
Sbjct: 128 THLYHCHQSPLAPHIAKGLYGGFIV-EPKEGRPPAD-------DEMVMVMNGYNTDGGDD 179
Query: 177 RWPGLRLHDVGQLPDTFLINGKGSYPVKGERYDFV 211
+ V LP F+ +PVK ++++ V
Sbjct: 180 N----EFYSVNGLPFHFM-----DFPVKVKQHELV 205
>pdb|2YXV|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXV|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
Length = 446
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 20 KGDTIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVP--MVCKGDTIVVDLHNKMPGRST 77
+G + VD++N++ TT+HWHGL + +DG P ++ G V L+ P +
Sbjct: 54 RGKAVTVDIYNQLT-EETTLHWHGL--EVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATC 110
Query: 78 TI--HWHGLTQR 87
H HG T R
Sbjct: 111 WFHPHQHGKTGR 122
>pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser
Mutations (M358s, M361s,M362s,M364s,M366s,M368s)
Length = 511
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 20 KGDTIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVP--MVCKGDTIVVDLHNKMPGRST 77
+G + VD++N++ TT+HWHGL + +DG P ++ G V L+ P +
Sbjct: 54 RGKAVTVDIYNQLT-EETTLHWHGL--EVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATC 110
Query: 78 TI--HWHGLTQR 87
H HG T R
Sbjct: 111 WFHPHQHGKTGR 122
>pdb|1PF3|A Chain A, Crystal Structure Of The M441l Mutant Of The Multicopper
Oxidase Cueo
Length = 498
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 20 KGDTIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVP--MVCKGDTIVVDLHNKMPGRST 77
+G + VD++N++ TT+HWHGL + +DG P ++ G V L+ P +
Sbjct: 54 RGKAVTVDIYNQLT-EETTLHWHGL--EVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATC 110
Query: 78 TI--HWHGLTQR 87
H HG T R
Sbjct: 111 WFHPHQHGKTGR 122
>pdb|1KV7|A Chain A, Crystal Structure Of Cueo, A Multi-Copper Oxidase From E.
Coli Involved In Copper Homeostasis
pdb|1N68|A Chain A, Copper Bound To The Multicopper Oxidase Cueo
pdb|2FQD|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQE|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQF|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQG|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|3NSD|A Chain A, Silver Bound To The Multicopper Oxidase Cueo (Untagged)
pdb|3OD3|A Chain A, Cueo At 1.1 A Resolution Including Residues In Previously
Disordered Region
pdb|3PAU|A Chain A, Cueo In The Resting Oxidized State
pdb|3PAV|A Chain A, The Reduced Form Of Cueo
Length = 488
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 20 KGDTIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVP--MVCKGDTIVVDLHNKMPGRST 77
+G + VD++N++ TT+HWHGL + +DG P ++ G V L+ P +
Sbjct: 54 RGKAVTVDIYNQLT-EETTLHWHGL--EVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATC 110
Query: 78 TI--HWHGLTQR 87
H HG T R
Sbjct: 111 WFHPHQHGKTGR 122
>pdb|3UAA|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data1)
pdb|3UAB|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data2)
pdb|3UAC|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data4)
pdb|3UAD|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data5)
pdb|3UAE|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data6)
Length = 489
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 20 KGDTIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVP--MVCKGDTIVVDLHNKMPGRST 77
+G + VD++N++ TT+HWHGL + +DG P ++ G V L+ P +
Sbjct: 54 RGKAVTVDIYNQLT-EETTLHWHGL--EVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATC 110
Query: 78 TI--HWHGLTQR 87
H HG T R
Sbjct: 111 WFHPHQHGKTGR 122
>pdb|3QQX|A Chain A, Reduced Native Intermediate Of The Multicopper Oxidase
Cueo
Length = 505
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 20 KGDTIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVP--MVCKGDTIVVDLHNKMPGRST 77
+G + VD++N++ TT+HWHGL + +DG P ++ G V L+ P +
Sbjct: 54 RGKAVTVDIYNQLT-EETTLHWHGL--EVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATC 110
Query: 78 TI--HWHGLTQR 87
H HG T R
Sbjct: 111 WFHPHQHGKTGR 122
>pdb|3NSC|A Chain A, C500s Mutant Of Cueo Bound To Cu(Ii)
pdb|3NT0|A Chain A, C500s (T1d) Mutant Of Cueo Soaked In And Bound To Cu(I)
Length = 505
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 20 KGDTIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVP--MVCKGDTIVVDLHNKMPGRST 77
+G + VD++N++ TT+HWHGL + +DG P ++ G V L+ P +
Sbjct: 54 RGKAVTVDIYNQLT-EETTLHWHGL--EVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATC 110
Query: 78 TI--HWHGLTQR 87
H HG T R
Sbjct: 111 WFHPHQHGKTGR 122
>pdb|3NSF|A Chain A, Apo Form Of The Multicopper Oxidase Cueo
Length = 505
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 20 KGDTIVVDLHNKMPGRSTTIHWHGLTQRLTPHMDGVP--MVCKGDTIVVDLHNKMPGRST 77
+G + VD++N++ TT+HWHGL + +DG P ++ G V L+ P +
Sbjct: 54 RGKAVTVDIYNQLT-EETTLHWHGL--EVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATC 110
Query: 78 TI--HWHGLTQR 87
H HG T R
Sbjct: 111 WFHPHQHGKTGR 122
>pdb|1T3T|A Chain A, Structure Of Formylglycinamide Synthetase
pdb|3UJN|A Chain A, Formyl Glycinamide Ribonucleotide Amidotransferase From
Salmonella Typhimurium : Role Of The Atp Complexation
And Glutaminase Domain In Catalytic Coupling
pdb|3UMM|A Chain A, Formylglycinamide Ribonucleotide Amidotransferase From
Salmonella Typhimurium: Role Of The Atp Complexation And
Glutaminase Domain In Catalytic Coupling
Length = 1303
Score = 30.0 bits (66), Expect = 2.4, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 147 SDPNS-RYYEYDNPSHVVLVTDWYHNTTSDERWPGLRLHDVGQLPDTFLINGKGSYPVKG 205
+D N+ RY + P+H+++ + +++ T+ WPG G++ D G+G+ P G
Sbjct: 281 ADHNTGRYDFHQEPAHILMKVETHNHPTAISPWPGAATGSGGEIRDEG-ATGRGAKPKAG 339
>pdb|3UGJ|A Chain A, Formyl Glycinamide Ribonucletide Amidotransferase From
Salmonella Typhimurum: Role Of The Atp Complexation And
Glutaminase Domain In Catalytic Coupling
Length = 1303
Score = 30.0 bits (66), Expect = 2.4, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 147 SDPNS-RYYEYDNPSHVVLVTDWYHNTTSDERWPGLRLHDVGQLPDTFLINGKGSYPVKG 205
+D N+ RY + P+H+++ + +++ T+ WPG G++ D G+G+ P G
Sbjct: 281 ADHNTGRYDFHQEPAHILMKVETHNHPTAISPWPGAATGSGGEIRDEG-ATGRGAKPKAG 339
>pdb|1E0W|A Chain A, Xylanase 10a From Sreptomyces Lividans. Native Structure
At 1.2 Angstrom Resolution
pdb|1E0X|A Chain A, Xylanase 10a From Sreptomyces Lividans. Xylobiosyl-Enzyme
Intermediate At 1.65 A
pdb|1E0X|B Chain B, Xylanase 10a From Sreptomyces Lividans. Xylobiosyl-Enzyme
Intermediate At 1.65 A
pdb|1OD8|A Chain A, Xylanase Xyn10a From Streptomyces Lividans In Complex With
Xylobio-Isofagomine Lactam
pdb|1V0K|A Chain A, Xylanase Xyn10a From Streptomyces Lividans In Complex With
Xylobio-Deoxynojirimycin At Ph 5.8
pdb|1V0L|A Chain A, Xylanase Xyn10a From Streptomyces Lividans In Complex With
Xylobio-isofagomine At Ph 5.8
pdb|1V0M|A Chain A, Xylanase Xyn10a From Streptomyces Lividans In Complex With
Xylobio-deoxynojirimycin At Ph 7.5
pdb|1V0N|A Chain A, Xylanase Xyn10a From Streptomyces Lividans In Complex With
Xylobio-Isofagomine At Ph 7.5
Length = 313
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 51/121 (42%), Gaps = 5/121 (4%)
Query: 69 HNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKFLADAAGTYFWHSHDG 128
H++ PG ++ L Q + H++GV + I++ +V F ++G
Sbjct: 86 HSQQPGWMQSLSGSALRQAMIDHINGVMAHYKGKIVQWDVVNEAFADGSSGA---RRDSN 142
Query: 129 FQKMDGIIGNLIIRQPRTSDPNSR--YYEYDNPSHVVLVTDWYHNTTSDERWPGLRLHDV 186
Q+ + R R +DP+++ Y +Y+ + T +N D + G+ + V
Sbjct: 143 LQRSGNDWIEVAFRTARAADPSAKLCYNDYNVENWTWAKTQAMYNMVRDFKQRGVPIDCV 202
Query: 187 G 187
G
Sbjct: 203 G 203
>pdb|1E0V|A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme
Intermediate At 1.7 A
Length = 313
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 51/121 (42%), Gaps = 5/121 (4%)
Query: 69 HNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKFLADAAGTYFWHSHDG 128
H++ PG ++ L Q + H++GV + I++ +V F ++G
Sbjct: 86 HSQQPGWMQSLSGSALRQAMIDHINGVMAHYKGKIVQWDVVNEAFADGSSGA---RRDSN 142
Query: 129 FQKMDGIIGNLIIRQPRTSDPNSR--YYEYDNPSHVVLVTDWYHNTTSDERWPGLRLHDV 186
Q+ + R R +DP+++ Y +Y+ + T +N D + G+ + V
Sbjct: 143 LQRSGNDWIEVAFRTARAADPSAKLCYNDYNVENWTWAKTQAMYNMVRDFKQRGVPIDCV 202
Query: 187 G 187
G
Sbjct: 203 G 203
>pdb|3CDZ|A Chain A, Crystal Structure Of Human Factor Viii
Length = 754
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 9/59 (15%)
Query: 61 GDTIVVDLHNKMPGRSTTIHWHGLT------QRLTPHMDGVPMVTQCPILEGNVFRYKF 113
GDT+++ N+ R I+ HG+T R P GV + PIL G +F+YK+
Sbjct: 458 GDTLLIIFKNQ-ASRPYNIYPHGITDVRPLYSRRLP--KGVKHLKDFPILPGEIFKYKW 513
>pdb|2R7E|A Chain A, Crystal Structure Analysis Of Coagulation Factor Viii
Length = 742
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 9/59 (15%)
Query: 61 GDTIVVDLHNKMPGRSTTIHWHGLT------QRLTPHMDGVPMVTQCPILEGNVFRYKF 113
GDT+++ N+ R I+ HG+T R P GV + PIL G +F+YK+
Sbjct: 459 GDTLLIIFKNQ-ASRPYNIYPHGITDVRPLYSRRLP--KGVKHLKDFPILPGEIFKYKW 514
>pdb|2D1Z|A Chain A, Crystal Structure Of Catalytic-Site Mutant Xylanase From
Streptomyces Olivaceoviridis E-86
pdb|2D1Z|B Chain B, Crystal Structure Of Catalytic-Site Mutant Xylanase From
Streptomyces Olivaceoviridis E-86
pdb|2D20|A Chain A, Crystal Structure Of Michaelis Complex Of Catalytic-Site
Mutant Xylanase From Streptomyces Olivaceoviridis E-86
pdb|2D20|B Chain B, Crystal Structure Of Michaelis Complex Of Catalytic-Site
Mutant Xylanase From Streptomyces Olivaceoviridis E-86
pdb|2D22|A Chain A, Crystal Structure Of Covalent Glycosyl-Enzyme Intermediate
Of Catalytic-Site Mutant Xylanase From Streptomyces
Olivaceoviridis E-86
pdb|2D22|B Chain B, Crystal Structure Of Covalent Glycosyl-Enzyme Intermediate
Of Catalytic-Site Mutant Xylanase From Streptomyces
Olivaceoviridis E-86
pdb|2D23|A Chain A, Crystal Structure Of Ep Complex Of Catalytic-Site Mutant
Xylanase From Streptomyces Olivaceoviridis E-86
pdb|2D23|B Chain B, Crystal Structure Of Ep Complex Of Catalytic-Site Mutant
Xylanase From Streptomyces Olivaceoviridis E-86
pdb|2D24|A Chain A, Crystal Structure Of Es Complex Of Catalytic-Site Mutant
Xylanase From Streptomyces Olivaceoviridis E-86
pdb|2D24|B Chain B, Crystal Structure Of Es Complex Of Catalytic-Site Mutant
Xylanase From Streptomyces Olivaceoviridis E-86
Length = 436
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 5/121 (4%)
Query: 69 HNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKFLADAAGTYFWHSHDG 128
H++ PG ++ L Q + H++GV + I + +V + F D +G
Sbjct: 86 HSQQPGWMQSLSGSTLRQAMIDHINGVMGHYKGKIAQWDVVSHAFSDDGSGG---RRDSN 142
Query: 129 FQKMDGIIGNLIIRQPRTSDPNSR--YYEYDNPSHVVLVTDWYHNTTSDERWPGLRLHDV 186
Q+ + R R +DP ++ Y +Y+ + T +N D + G+ + V
Sbjct: 143 LQRTGNDWIEVAFRTARAADPAAKLCYNDYNIENWTWAKTQGVYNMVRDFKQRGVPIDCV 202
Query: 187 G 187
G
Sbjct: 203 G 203
>pdb|1XAS|A Chain A, Crystal Structure, At 2.6 Angstroms Resolution, Of The
Streptomyces Lividans Xylanase A, A Member Of The F
Family Of Beta-1,4-D-Glycanses
Length = 299
Score = 28.1 bits (61), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 51/121 (42%), Gaps = 5/121 (4%)
Query: 69 HNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKFLADAAGTYFWHSHDG 128
H++ PG ++ L Q + H++GV + I++ +V F ++G
Sbjct: 86 HSQQPGWMQSLSGRPLRQAMIDHINGVMAHYKGKIVQWDVVNEAFADGSSGA---RRDSN 142
Query: 129 FQKMDGIIGNLIIRQPRTSDPNSR--YYEYDNPSHVVLVTDWYHNTTSDERWPGLRLHDV 186
Q+ + R R +DP+++ Y +Y+ + T +N D + G+ + V
Sbjct: 143 LQRSGNDWIEVAFRTARAADPSAKLCYNDYNVENWTWAKTQAMYNMVRDFKQRGVPIDCV 202
Query: 187 G 187
G
Sbjct: 203 G 203
>pdb|1V6Y|A Chain A, Crystal Structure Of Chimeric Xylanase Between
Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas
Fimi Cex
Length = 324
Score = 28.1 bits (61), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 54/138 (39%), Gaps = 13/138 (9%)
Query: 69 HNKMPGRSTTIHWHGLTQRLTPHMDGVPMVTQCPILEGNVFRYKFLADAAGTYFWHSHDG 128
H++ PG ++ L Q + H++GV + I + +V F D +G
Sbjct: 86 HSQQPGWMQSLSGSTLRQAMIDHINGVMGHYKGKIAQWDVVNEAFSDDGSGG---RRDSN 142
Query: 129 FQKMDGIIGNLIIRQPRTSDPNSR--YYEYDNPSHVVLVTDWYHNTTSDERWPGLRLH-- 184
Q+ + R R +DP ++ Y +Y+ + T +N D + G+ +
Sbjct: 143 LQRTGNDWIEVAFRTARAADPAAKLCYNDYNIENWTWAKTQGVYNMVRDFKQRGVPIDCV 202
Query: 185 ------DVGQLPDTFLIN 196
VGQ+P F N
Sbjct: 203 GFQSHLIVGQVPGDFRQN 220
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.140 0.461
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,313,204
Number of Sequences: 62578
Number of extensions: 675573
Number of successful extensions: 1200
Number of sequences better than 100.0: 54
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1040
Number of HSP's gapped (non-prelim): 120
length of query: 396
length of database: 14,973,337
effective HSP length: 101
effective length of query: 295
effective length of database: 8,652,959
effective search space: 2552622905
effective search space used: 2552622905
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)