BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13507
(238 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2C1C|A Chain A, Structural Basis Of The Resistance Of An Insect
Carboxypeptidase To Plant Protease Inhibitors
pdb|2C1C|B Chain B, Structural Basis Of The Resistance Of An Insect
Carboxypeptidase To Plant Protease Inhibitors
Length = 312
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Query: 37 INSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGN---PIIVLDGGIHAREWI 93
I+ YL +I Y V E+ EGRPI+ +KIS + P+I +DGGIHAREWI
Sbjct: 12 IDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKISTTNFEDENKPVIFIDGGIHAREWI 71
Query: 94 APATVLYVLQQLVENPENFPMFRKVDWILIPMLNPDGYVYSMT 136
+P +V + + +LVE+ + K DWIL+P++NPDGY Y+ T
Sbjct: 72 SPPSVTWAIHKLVEDVTENDLLEKFDWILLPVVNPDGYKYTFT 114
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
Query: 138 INSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGN---PIIVLDGGIHAREWI 194
I+ YL +I Y V E+ EGRPI+ +KIS + P+I +DGGIHAREWI
Sbjct: 12 IDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKISTTNFEDENKPVIFIDGGIHAREWI 71
Query: 195 APATVLYVLQQLVENPENFPMFRKVDWILIPMLNPDGYVYSMT 237
+P +V + + +LVE+ + K DWIL+P++NPDGY Y+ T
Sbjct: 72 SPPSVTWAIHKLVEDVTENDLLEKFDWILLPVVNPDGYKYTFT 114
>pdb|2BOA|A Chain A, Human Procarboxypeptidase A4.
pdb|2BOA|B Chain B, Human Procarboxypeptidase A4
Length = 404
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 14/196 (7%)
Query: 15 ENKIDENVNTTRLNHVEKVHQQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHG 74
+ + N N + +E ++ +++ +IA + IG + E RP+ +K S G
Sbjct: 94 QERSSNNFNYGAYHSLEAIYHEMD----NIAADFPDLARRVKIGHSFENRPMYVLKFSTG 149
Query: 75 -GVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFP----MFRKVDWILIPMLNPD 129
GV P + L+ GIH+REWI+ AT ++ +++V + + P + K+D L+P+ NPD
Sbjct: 150 KGVRRPAVWLNAGIHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPD 209
Query: 130 GYVYSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIH 189
GYVY+ T+ + K +R G S IG R A G NP + G H
Sbjct: 210 GYVYTQTQNRLWRKTRSRNPGS----SCIGAD-PNRNWNASFAGKGASDNPCSEVYHGPH 264
Query: 190 AREWIAPATVLYVLQQ 205
A + +V+ +Q+
Sbjct: 265 ANSEVEVKSVVDFIQK 280
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 5/114 (4%)
Query: 130 GYVYSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHG-GVGNPIIVLDGGI 188
G +S+ I + +IA + IG + E RP+ +K S G GV P + L+ GI
Sbjct: 104 GAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAVWLNAGI 163
Query: 189 HAREWIAPATVLYVLQQLVENPENFP----MFRKVDWILIPMLNPDGYVYSMTK 238
H+REWI+ AT ++ +++V + + P + K+D L+P+ NPDGYVY+ T+
Sbjct: 164 HSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQ 217
>pdb|4A94|A Chain A, Structure Of The Carboxypeptidase Inhibitor From Nerita
Versicolor In Complex With Human Cpa4
pdb|4A94|B Chain B, Structure Of The Carboxypeptidase Inhibitor From Nerita
Versicolor In Complex With Human Cpa4
Length = 310
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 14/194 (7%)
Query: 17 KIDENVNTTRLNHVEKVHQQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHG-G 75
+ N N + +E ++ +++ +IA + IG + E RP+ +K S G G
Sbjct: 2 RSSNNFNYGAYHSLEAIYHEMD----NIAADFPDLARRVKIGHSFENRPMYVLKFSTGKG 57
Query: 76 VGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFP----MFRKVDWILIPMLNPDGY 131
V P + L+ GIH+REWI+ AT ++ +++V + + P + K+D L+P+ NPDGY
Sbjct: 58 VRRPAVWLNAGIHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGY 117
Query: 132 VYSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAR 191
VY+ T+ + K +R G S IG R A G NP + G HA
Sbjct: 118 VYTQTQNRLWRKTRSRNPGS----SCIGAD-PNRNWNASFAGKGASDNPCSEVYHGPHAN 172
Query: 192 EWIAPATVLYVLQQ 205
+ +V+ +Q+
Sbjct: 173 SEVEVKSVVDFIQK 186
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 5/114 (4%)
Query: 130 GYVYSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHG-GVGNPIIVLDGGI 188
G +S+ I + +IA + IG + E RP+ +K S G GV P + L+ GI
Sbjct: 10 GAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAVWLNAGI 69
Query: 189 HAREWIAPATVLYVLQQLVENPENFP----MFRKVDWILIPMLNPDGYVYSMTK 238
H+REWI+ AT ++ +++V + + P + K+D L+P+ NPDGYVY+ T+
Sbjct: 70 HSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQ 123
>pdb|2BO9|A Chain A, Human Carboxypeptidase A4 In Complex With Human Latexin.
pdb|2BO9|C Chain C, Human Carboxypeptidase A4 In Complex With Human Latexin
Length = 308
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 14/190 (7%)
Query: 21 NVNTTRLNHVEKVHQQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHG-GVGNP 79
N N + +E ++ +++ +IA + IG + E RP+ +K S G GV P
Sbjct: 4 NFNYGAYHSLEAIYHEMD----NIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRP 59
Query: 80 IIVLDGGIHAREWIAPATVLYVLQQLVENPENFP----MFRKVDWILIPMLNPDGYVYSM 135
+ L+ GIH+REWI+ AT ++ +++V + + P + K+D L+P+ NPDGYVY+
Sbjct: 60 AVWLNAGIHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQ 119
Query: 136 TKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIA 195
T+ + K +R G S IG R A G NP + G HA +
Sbjct: 120 TQNRLWRKTRSRNPGS----SCIGAD-PNRNWNASFAGKGASDNPCSEVYHGPHANSEVE 174
Query: 196 PATVLYVLQQ 205
+V+ +Q+
Sbjct: 175 VKSVVDFIQK 184
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 5/114 (4%)
Query: 130 GYVYSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHG-GVGNPIIVLDGGI 188
G +S+ I + +IA + IG + E RP+ +K S G GV P + L+ GI
Sbjct: 8 GAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAVWLNAGI 67
Query: 189 HAREWIAPATVLYVLQQLVENPENFP----MFRKVDWILIPMLNPDGYVYSMTK 238
H+REWI+ AT ++ +++V + + P + K+D L+P+ NPDGYVY+ T+
Sbjct: 68 HSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQ 121
>pdb|2PCU|A Chain A, Human Carboxypeptidase A4 In Complex With A Cleaved
Hexapeptide
Length = 305
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 14/190 (7%)
Query: 21 NVNTTRLNHVEKVHQQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHG-GVGNP 79
N N + +E ++ +++ +IA + IG + E RP+ +K S G GV P
Sbjct: 2 NFNYGAYHSLEAIYHEMD----NIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRP 57
Query: 80 IIVLDGGIHAREWIAPATVLYVLQQLVENPENFP----MFRKVDWILIPMLNPDGYVYSM 135
+ L+ GIH+REWI+ AT ++ +++V + + P + K+D L+P+ NPDGYVY+
Sbjct: 58 AVWLNAGIHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQ 117
Query: 136 TKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIA 195
T+ + K +R G S IG R A G NP + G HA +
Sbjct: 118 TQNRLWRKTRSRNPGS----SCIGAD-PNRNWNASFAGKGASDNPCSEVYHGPHANSEVE 172
Query: 196 PATVLYVLQQ 205
+V+ +Q+
Sbjct: 173 VKSVVDFIQK 182
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 5/114 (4%)
Query: 130 GYVYSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHG-GVGNPIIVLDGGI 188
G +S+ I + +IA + IG + E RP+ +K S G GV P + L+ GI
Sbjct: 6 GAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAVWLNAGI 65
Query: 189 HAREWIAPATVLYVLQQLVENPENFP----MFRKVDWILIPMLNPDGYVYSMTK 238
H+REWI+ AT ++ +++V + + P + K+D L+P+ NPDGYVY+ T+
Sbjct: 66 HSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQ 119
>pdb|1AYE|A Chain A, Human Procarboxypeptidase A2
Length = 401
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Query: 21 NVNTTRLNHVEKVHQQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPI 80
N N + +E++ Q++++ + + KVN IG + E RP+ +K S GG P
Sbjct: 99 NFNFGAYHTLEEISQEMDNLVAEHPGLVS-KVN---IGSSFENRPMNVLKFSTGG-DKPA 153
Query: 81 IVLDGGIHAREWIAPATVLYVLQQLV----ENPENFPMFRKVDWILIPMLNPDGYVYSMT 136
I LD GIHAREW+ AT L+ ++V ++P + +D L+P+ NPDGYV+S T
Sbjct: 154 IWLDAGIHAREWVTQATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGYVFSQT 213
Query: 137 KINSYLKHIARIYG 150
K + K +++ G
Sbjct: 214 KNRMWRKTRSKVSG 227
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 5/113 (4%)
Query: 130 GYVYSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIH 189
G +++ +I+ + ++ + V+ IG + E RP+ +K S GG P I LD GIH
Sbjct: 103 GAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGG-DKPAIWLDAGIH 161
Query: 190 AREWIAPATVLYVLQQLV----ENPENFPMFRKVDWILIPMLNPDGYVYSMTK 238
AREW+ AT L+ ++V ++P + +D L+P+ NPDGYV+S TK
Sbjct: 162 AREWVTQATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGYVFSQTK 214
>pdb|1JQG|A Chain A, Crystal Structure Of The Carboxypeptidase A From
Helicoverpa Armigera
Length = 433
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 78/142 (54%), Gaps = 6/142 (4%)
Query: 13 LSENKIDENVNTTRLNHVEKVH--QQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVK 70
L+ N +RL+ +K+H +++++YL+ +A+ + + V V G++ EGR I+ ++
Sbjct: 102 LAAAAAKSNSTRSRLS-FDKIHSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLR 160
Query: 71 IS---HGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFRKVDWILIPMLN 127
IS P++++ +H REW+ LY + +LV + + +DWI++P+ N
Sbjct: 161 ISTTNFQDASKPVVMMQSLLHCREWVTLPATLYAIHKLVIDVTESDLINNIDWIILPVAN 220
Query: 128 PDGYVYSMTKINSYLKHIARIY 149
PDGYV++ + K+ A Y
Sbjct: 221 PDGYVHTFGGDRYWRKNRATGY 242
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 132 VYSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKIS---HGGVGNPIIVLDGGI 188
++S ++++YL+ +A+ + + V V G++ EGR I+ ++IS P++++ +
Sbjct: 121 IHSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRISTTNFQDASKPVVMMQSLL 180
Query: 189 HAREWIAPATVLYVLQQLVENPENFPMFRKVDWILIPMLNPDGYVYSM 236
H REW+ LY + +LV + + +DWI++P+ NPDGYV++
Sbjct: 181 HCREWVTLPATLYAIHKLVIDVTESDLINNIDWIILPVANPDGYVHTF 228
>pdb|1DTD|A Chain A, Crystal Structure Of The Complex Between The Leech
Carboxypeptidase Inhibitor And The Human
Carboxypeptidase A2 (Lci-Cpa2)
Length = 303
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 8/109 (7%)
Query: 51 KVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLV---- 106
KVN IG + E RP+ +K S GG P I LD GIHAREW+ AT L+ ++V
Sbjct: 29 KVN---IGSSFENRPMNVLKFSTGG-DKPAIWLDAGIHAREWVTQATALWTANKIVSDYG 84
Query: 107 ENPENFPMFRKVDWILIPMLNPDGYVYSMTKINSYLKHIARIYGHKVNV 155
++P + +D L+P+ NPDGYV+S TK + K +++ + V
Sbjct: 85 KDPSITSILDALDIFLLPVTNPDGYVFSQTKNRMWRKTRSKVSAGSLCV 133
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 5/113 (4%)
Query: 130 GYVYSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIH 189
G +++ +I+ + ++ + V+ IG + E RP+ +K S GG P I LD GIH
Sbjct: 4 GAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGG-DKPAIWLDAGIH 62
Query: 190 AREWIAPATVLYVLQQLV----ENPENFPMFRKVDWILIPMLNPDGYVYSMTK 238
AREW+ AT L+ ++V ++P + +D L+P+ NPDGYV+S TK
Sbjct: 63 AREWVTQATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGYVFSQTK 115
>pdb|1KWM|A Chain A, Human Procarboxypeptidase B: Three-Dimensional Structure
And Implications For Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|1KWM|B Chain B, Human Procarboxypeptidase B: Three-Dimensional Structure
And Implications For Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
Length = 402
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 7/135 (5%)
Query: 15 ENKIDENVNTTRLNHVEKVH--QQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKIS 72
E + D V T ++ EK + + I ++ + +A ++ S IG T EGR I +K+
Sbjct: 87 EAQFDSRVRATGHSY-EKYNKWETIEAWTQQVATENPALISRSVIGTTFEGRAIYLLKVG 145
Query: 73 HGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENP----ENFPMFRKVDWILIPMLNP 128
G P I +D G HAREWI+PA + +++ V + + K+D+ ++P+LN
Sbjct: 146 KAGQNKPAIFMDCGFHAREWISPAFCQWFVREAVRTYGREIQVTELLNKLDFYVLPVLNI 205
Query: 129 DGYVYSMTKINSYLK 143
DGY+Y+ TK + K
Sbjct: 206 DGYIYTWTKSRFWRK 220
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 153 VNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENP-- 210
++ S IG T EGR I +K+ G P I +D G HAREWI+PA + +++ V
Sbjct: 125 ISRSVIGTTFEGRAIYLLKVGKAGQNKPAIFMDCGFHAREWISPAFCQWFVREAVRTYGR 184
Query: 211 --ENFPMFRKVDWILIPMLNPDGYVYSMTK 238
+ + K+D+ ++P+LN DGY+Y+ TK
Sbjct: 185 EIQVTELLNKLDFYVLPVLNIDGYIYTWTK 214
>pdb|1ZLI|A Chain A, Crystal Structure Of The Tick Carboxypeptidase Inhibitor
In Complex With Human Carboxypeptidase B
Length = 309
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Query: 35 QQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIA 94
+ I ++ + +A ++ S IG T EGR I +K+ G P I +D G HAREWI+
Sbjct: 15 ETIEAWTQQVATENPALISRSVIGTTFEGRAIYLLKVGKAGQNKPAIFMDCGFHAREWIS 74
Query: 95 PATVLYVLQQLVENP----ENFPMFRKVDWILIPMLNPDGYVYSMTKINSYLK 143
PA + +++ V + + K+D+ ++P+LN DGY+Y+ TK + K
Sbjct: 75 PAFCQWFVREAVRTYGREIQVTELLNKLDFYVLPVLNIDGYIYTWTKSRFWRK 127
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 153 VNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENP-- 210
++ S IG T EGR I +K+ G P I +D G HAREWI+PA + +++ V
Sbjct: 32 ISRSVIGTTFEGRAIYLLKVGKAGQNKPAIFMDCGFHAREWISPAFCQWFVREAVRTYGR 91
Query: 211 --ENFPMFRKVDWILIPMLNPDGYVYSMTK 238
+ + K+D+ ++P+LN DGY+Y+ TK
Sbjct: 92 EIQVTELLNKLDFYVLPVLNIDGYIYTWTK 121
>pdb|1CPX|A Chain A, Beta Form Of Carboxypeptidase A (Residues 3-307) From
Bovine Pancreas In An Orthorhombic Crystal Form With Two
Zinc Ions In The Active Site.
pdb|1F57|A Chain A, Carboxypeptidase A Complex With D-Cysteine At 1.75 A
pdb|1M4L|A Chain A, Structure Of Native Carboxypeptidase A At 1.25 Resolution
pdb|1ARL|A Chain A, Carboxypeptidase A With Zn Removed
pdb|2RFH|A Chain A, Crystal Structure Analysis Of
Cpa-2-Benzyl-3-Nitropropanoic Acid Complex
Length = 307
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 57 IGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFR 116
IG + EGRPI +K S GG P I +D GIH+REWI AT ++ ++ E+ P F
Sbjct: 38 IGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFT 97
Query: 117 KV----DWILIPMLNPDGYVYSMTK 137
+ D L + NPDG+ ++ ++
Sbjct: 98 AILDSMDIFLEIVTNPDGFAFTHSQ 122
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 158 IGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFR 217
IG + EGRPI +K S GG P I +D GIH+REWI AT ++ ++ E+ P F
Sbjct: 38 IGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFT 97
Query: 218 KV----DWILIPMLNPDGYVYSMTK 238
+ D L + NPDG+ ++ ++
Sbjct: 98 AILDSMDIFLEIVTNPDGFAFTHSQ 122
>pdb|3FX6|A Chain A, X-Ray Crystallographic Studies On The Complex Of
Carboxypeptidase A With The Inhibitor Using Alpha-Nitro
Ketone As The Zinc-Binding Group
pdb|3FX6|C Chain C, X-Ray Crystallographic Studies On The Complex Of
Carboxypeptidase A With The Inhibitor Using Alpha-Nitro
Ketone As The Zinc-Binding Group
pdb|3FX6|E Chain E, X-Ray Crystallographic Studies On The Complex Of
Carboxypeptidase A With The Inhibitor Using Alpha-Nitro
Ketone As The Zinc-Binding Group
pdb|3FVL|A Chain A, Crystallogic Studies On The Complex Of Carboxypeptidase A
With Inhibitors Using Alpha-Hydroxy Ketone As
Zinc-Binding Group
pdb|3FVL|C Chain C, Crystallogic Studies On The Complex Of Carboxypeptidase A
With Inhibitors Using Alpha-Hydroxy Ketone As
Zinc-Binding Group
pdb|3FVL|E Chain E, Crystallogic Studies On The Complex Of Carboxypeptidase A
With Inhibitors Using Alpha-Hydroxy Ketone As
Zinc-Binding Group
Length = 307
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 57 IGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFR 116
IG + EGRPI +K S GG P I +D GIH+REWI AT ++ ++ E+ P F
Sbjct: 38 IGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFT 97
Query: 117 KV----DWILIPMLNPDGYVYSMTK 137
+ D L + NPDG+ ++ ++
Sbjct: 98 AILDSMDIFLEIVTNPDGFAFTHSQ 122
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 158 IGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFR 217
IG + EGRPI +K S GG P I +D GIH+REWI AT ++ ++ E+ P F
Sbjct: 38 IGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFT 97
Query: 218 KV----DWILIPMLNPDGYVYSMTK 238
+ D L + NPDG+ ++ ++
Sbjct: 98 AILDSMDIFLEIVTNPDGFAFTHSQ 122
>pdb|1HDQ|A Chain A, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With D-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|2CTB|A Chain A, The High Resolution Crystal Structure Of The Complex
Between Carboxypeptidase A And L-Phenyl Lactate
pdb|2CTC|A Chain A, The High Resolution Crystal Structure Of The Complex
Between Carboxypeptidase A And L-Phenyl Lactate
Length = 307
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 57 IGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFR 116
IG + EGRPI +K S GG P I +D GIH+REWI AT ++ ++ E+ P F
Sbjct: 38 IGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFT 97
Query: 117 KV----DWILIPMLNPDGYVYSMTK 137
+ D L + NPDG+ ++ ++
Sbjct: 98 AILDSMDIFLEIVTNPDGFAFTHSQ 122
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 158 IGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFR 217
IG + EGRPI +K S GG P I +D GIH+REWI AT ++ ++ E+ P F
Sbjct: 38 IGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFT 97
Query: 218 KV----DWILIPMLNPDGYVYSMTK 238
+ D L + NPDG+ ++ ++
Sbjct: 98 AILDSMDIFLEIVTNPDGFAFTHSQ 122
>pdb|1CBX|A Chain A, Crystal Structure Of The Complex Between Carboxypeptidase
A And The Biproduct Analog Inhibitor L-Benzylsuccinate
At 2.0 Angstroms Resolution
pdb|1CPS|A Chain A, Structural Comparison Of Sulfodiimine And Sulfonamide
Inhibitors In Their Complexes With Zinc Enzymes
Length = 307
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 15/182 (8%)
Query: 57 IGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFR 116
IG + EGRPI +K S GG P I +D GIH+REWI AT ++ ++ EN P F
Sbjct: 38 IGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREWITQATGVWFAKKFTENYGQNPSFT 97
Query: 117 KV----DWILIPMLNPDGYVYSMTKINSYLKHIARIYGHKVNVSTIGETIEG-RPIQAVK 171
+ D L + NP+G+ ++ ++ + K V S++ ++ R A
Sbjct: 98 AILDSMDIFLEIVTNPNGFAFTHSENRLWRK------TRSVTSSSLCVGVDANRNWDAGF 151
Query: 172 ISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFRKVDWILIPMLNPDG 231
G +P G +A + +++ V+N NF F + +L P G
Sbjct: 152 GKAGASSSPCSETYHGKYANSEVEVKSIV----DFVKNHGNFKAFLSIHSYSQLLLYPYG 207
Query: 232 YV 233
Y
Sbjct: 208 YT 209
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 158 IGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFR 217
IG + EGRPI +K S GG P I +D GIH+REWI AT ++ ++ EN P F
Sbjct: 38 IGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREWITQATGVWFAKKFTENYGQNPSFT 97
Query: 218 KV----DWILIPMLNPDGYVYSMTK 238
+ D L + NP+G+ ++ ++
Sbjct: 98 AILDSMDIFLEIVTNPNGFAFTHSE 122
>pdb|1HDU|A Chain A, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HDU|B Chain B, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HDU|D Chain D, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HDU|E Chain E, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HEE|A Chain A, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1HEE|B Chain B, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1HEE|D Chain D, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1HEE|E Chain E, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1IY7|A Chain A, Crystal Structure Of Cpa And Sulfamide-based Inhibitor
Complex
pdb|5CPA|A Chain A, Refined Crystal Structure Of Carboxypeptidase A At 1.54
Angstroms Resolution.
pdb|6CPA|A Chain A, Crystal Structure Of The Complex Of Carboxypeptidase A
With A Strongly Bound Phosphonate In A New Crystalline
Form: Comparison With Structures Of Other Complexes
pdb|7CPA|A Chain A, Comparison Of The Structures Of Three Carboxypeptidase A-
Phosphonate Complexes Determined By X-Ray
Crystallography
pdb|8CPA|A Chain A, Comparison Of The Structures Of Three Carboxypeptidase A-
Phosphonate Complexes Determined By X-Ray
Crystallography
pdb|3CPA|A Chain A, X-Ray Crystallographic Investigation Of Substrate Binding
To Carboxypeptidase A At Subzero Temperature
pdb|4CPA|A Chain A, Refined Crystal Structure Of The Potato Inhibitor Complex
Of Carboxypeptidase A At 2.5 Angstroms Resolution
pdb|4CPA|B Chain B, Refined Crystal Structure Of The Potato Inhibitor Complex
Of Carboxypeptidase A At 2.5 Angstroms Resolution
Length = 307
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 15/182 (8%)
Query: 57 IGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFR 116
IG + EGRPI +K S GG P I +D GIH+REWI AT ++ ++ EN P F
Sbjct: 38 IGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREWITQATGVWFAKKFTENYGQNPSFT 97
Query: 117 KV----DWILIPMLNPDGYVYSMTKINSYLKHIARIYGHKVNVSTIGETIEG-RPIQAVK 171
+ D L + NP+G+ ++ ++ + K V S++ ++ R A
Sbjct: 98 AILDSMDIFLEIVTNPNGFAFTHSENRLWRK------TRSVTSSSLCVGVDANRNWDAGF 151
Query: 172 ISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFRKVDWILIPMLNPDG 231
G +P G +A + +++ V+N NF F + +L P G
Sbjct: 152 GKAGASSSPCSETYHGKYANSEVEVKSIV----DFVKNHGNFKAFLSIHSYSQLLLYPYG 207
Query: 232 YV 233
Y
Sbjct: 208 YT 209
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 158 IGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFR 217
IG + EGRPI +K S GG P I +D GIH+REWI AT ++ ++ EN P F
Sbjct: 38 IGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREWITQATGVWFAKKFTENYGQNPSFT 97
Query: 218 KV----DWILIPMLNPDGYVYSMTK 238
+ D L + NP+G+ ++ ++
Sbjct: 98 AILDSMDIFLEIVTNPNGFAFTHSE 122
>pdb|1EE3|P Chain P, Cadmium-Substituted Bovine Pancreatic Carboxypeptidase A
(Alfa-Form) At Ph 7.5 And 2 Mm Chloride In Monoclinic
Crystal Form
pdb|1ELL|P Chain P, Cadmium-Substituted Bovine Pancreatic Carboxypeptidase A
(Alfa-Form) At Ph 7.5 And 0.25 M Chloride In Monoclinic
Crystal Form.
pdb|1ELM|P Chain P, Cadmium-Substituted Bovine Pacreatic Carboxypeptidase A
(Alfa-Form) At Ph 5.5 And 2 Mm Chloride In Monoclinic
Crystal Form.
pdb|1ZLH|A Chain A, Crystal Structure Of The Tick Carboxypeptidase Inhibitor
In Complex With Bovine Carboxypeptidase A
pdb|2ABZ|A Chain A, Crystal Structure Of C19aC43A MUTANT OF LEECH
Carboxypeptidase Inhibitor In Complex With Bovine
Carboxypeptidase A
pdb|2ABZ|B Chain B, Crystal Structure Of C19aC43A MUTANT OF LEECH
Carboxypeptidase Inhibitor In Complex With Bovine
Carboxypeptidase A
pdb|1ARM|A Chain A, Carboxypeptidase A With Zn Replaced By Hg
pdb|1YME|A Chain A, Structure Of Carboxypeptidase
pdb|3I1U|A Chain A, Carboxypeptidase A Inhibited By A Thiirane Mechanism-Based
Inactivator
pdb|3HLP|A Chain A, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
pdb|3HLP|B Chain B, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
pdb|3HUV|A Chain A, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
Length = 309
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 57 IGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFR 116
IG + EGRPI +K S GG P I +D GIH+REWI AT ++ ++ E+ P F
Sbjct: 38 IGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFT 97
Query: 117 KV----DWILIPMLNPDGYVYSMTK 137
+ D L + NPDG+ ++ ++
Sbjct: 98 AILDSMDIFLEIVTNPDGFAFTHSQ 122
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 158 IGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFR 217
IG + EGRPI +K S GG P I +D GIH+REWI AT ++ ++ E+ P F
Sbjct: 38 IGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFT 97
Query: 218 KV----DWILIPMLNPDGYVYSMTK 238
+ D L + NPDG+ ++ ++
Sbjct: 98 AILDSMDIFLEIVTNPDGFAFTHSQ 122
>pdb|1BAV|A Chain A, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
pdb|1BAV|B Chain B, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
pdb|1BAV|C Chain C, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
pdb|1BAV|D Chain D, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
Length = 309
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 15/182 (8%)
Query: 57 IGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFR 116
IG + EGRPI +K S GG P I +D GIH+REWI AT ++ ++ EN P F
Sbjct: 38 IGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREWITQATGVWFAKKFTENYGQNPSFT 97
Query: 117 KV----DWILIPMLNPDGYVYSMTKINSYLKHIARIYGHKVNVSTIGETIEG-RPIQAVK 171
+ D L + NP+G+ ++ ++ + K V S++ ++ R A
Sbjct: 98 AILDSMDIFLEIVTNPNGFAFTHSENRLWRK------TRSVTSSSLCVGVDANRNWDAGF 151
Query: 172 ISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFRKVDWILIPMLNPDG 231
G +P G +A + +++ V+N NF F + +L P G
Sbjct: 152 GKAGASSSPCSETYHGKYANSEVEVKSIV----DFVKNHGNFKAFLSIHSYSQLLLYPYG 207
Query: 232 YV 233
Y
Sbjct: 208 YT 209
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 158 IGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFR 217
IG + EGRPI +K S GG P I +D GIH+REWI AT ++ ++ EN P F
Sbjct: 38 IGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREWITQATGVWFAKKFTENYGQNPSFT 97
Query: 218 KV----DWILIPMLNPDGYVYSMTK 238
+ D L + NP+G+ ++ ++
Sbjct: 98 AILDSMDIFLEIVTNPNGFAFTHSE 122
>pdb|1PYT|B Chain B, Ternary Complex Of Procarboxypeptidase A, Proproteinase E,
And Chymotrypsinogen C
pdb|3KGQ|A Chain A, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
Length = 309
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 57 IGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFR 116
IG + EGRPI +K S GG P I +D GIH+REWI AT ++ ++ E+ P F
Sbjct: 38 IGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFT 97
Query: 117 KV----DWILIPMLNPDGYVYSMTK 137
+ D L + NPDG+ ++ ++
Sbjct: 98 AILDSMDIFLEIVTNPDGFAFTHSQ 122
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 158 IGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFR 217
IG + EGRPI +K S GG P I +D GIH+REWI AT ++ ++ E+ P F
Sbjct: 38 IGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFT 97
Query: 218 KV----DWILIPMLNPDGYVYSMTK 238
+ D L + NPDG+ ++ ++
Sbjct: 98 AILDSMDIFLEIVTNPDGFAFTHSQ 122
>pdb|3FJU|A Chain A, Ascaris Suum Carboxypeptidase Inhibitor In Complex With
Human Carboxypeptidase A1
Length = 307
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 35 QQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIA 94
++I +L + H V+ IG T EGRPI +K S GG P I +D GIH+REW+
Sbjct: 15 EEIYDFLDLLVAENPHLVSKIQIGNTYEGRPIYVLKFSTGGSKRPAIWIDTGIHSREWVT 74
Query: 95 PATVLYVLQQLVENPENFPMFRKV----DWILIPMLNPDGYVYS 134
A+ ++ +++ ++ F + D L + NPDG+ ++
Sbjct: 75 QASGVWFAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFT 118
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 151 HKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENP 210
H V+ IG T EGRPI +K S GG P I +D GIH+REW+ A+ ++ +++ ++
Sbjct: 30 HLVSKIQIGNTYEGRPIYVLKFSTGGSKRPAIWIDTGIHSREWVTQASGVWFAKKITQDY 89
Query: 211 ENFPMFRKV----DWILIPMLNPDGYVYS 235
F + D L + NPDG+ ++
Sbjct: 90 GQDAAFTAILDTLDIFLEIVTNPDGFAFT 118
>pdb|2V77|A Chain A, Crystal Structure Of Human Carboxypeptidase A1
pdb|2V77|B Chain B, Crystal Structure Of Human Carboxypeptidase A1
Length = 309
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 35 QQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIA 94
++I +L + H V+ IG T EGRPI +K S GG P I +D GIH+REW+
Sbjct: 16 EEIYDFLDLLVAENPHLVSKIQIGNTYEGRPIYVLKFSTGGSKRPAIWIDTGIHSREWVT 75
Query: 95 PATVLYVLQQLVENPENFPMFRKV----DWILIPMLNPDGYVYS 134
A+ ++ +++ ++ F + D L + NPDG+ ++
Sbjct: 76 QASGVWFAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFT 119
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 151 HKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENP 210
H V+ IG T EGRPI +K S GG P I +D GIH+REW+ A+ ++ +++ ++
Sbjct: 31 HLVSKIQIGNTYEGRPIYVLKFSTGGSKRPAIWIDTGIHSREWVTQASGVWFAKKITQDY 90
Query: 211 ENFPMFRKV----DWILIPMLNPDGYVYS 235
F + D L + NPDG+ ++
Sbjct: 91 GQDAAFTAILDTLDIFLEIVTNPDGFAFT 119
>pdb|1PCA|A Chain A, Three Dimensional Structure Of Porcine Pancreatic
Procarboxypeptidase A. A Comparison Of The A And B
Zymogens And Their Determinants For Inhibition And
Activation
Length = 403
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 57 IGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFR 116
IG + EGRPI +K S GG P I +D GIH+REWI A+ ++ +++ EN F
Sbjct: 133 IGRSYEGRPIYVLKFSTGGSNRPAIWIDSGIHSREWITQASGVWFAKKITENYGQNSSFT 192
Query: 117 KV----DWILIPMLNPDGYVYSMTKINSYLKHIARIYG 150
+ D L + NP+G+ ++ + + K ++ G
Sbjct: 193 AILDSMDIFLEIVTNPNGFAFTHSDNRLWRKTRSKASG 230
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 158 IGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFR 217
IG + EGRPI +K S GG P I +D GIH+REWI A+ ++ +++ EN F
Sbjct: 133 IGRSYEGRPIYVLKFSTGGSNRPAIWIDSGIHSREWITQASGVWFAKKITENYGQNSSFT 192
Query: 218 KV----DWILIPMLNPDGYVYS 235
+ D L + NP+G+ ++
Sbjct: 193 AILDSMDIFLEIVTNPNGFAFT 214
>pdb|3GLJ|A Chain A, A Polymorph Of Carboxypeptidase B Zymogen Structure
Length = 401
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 15 ENKIDENVNTTRLNHVEKVH--QQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKIS 72
E + D V TT ++ EK + + I ++ K + ++ + IG T G I +K+
Sbjct: 87 EAQFDSRVRTTGHSY-EKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVG 145
Query: 73 HGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLV----ENPENFPMFRKVDWILIPMLNP 128
G P I +D G HAREWI+ A + +++ V K+D+ ++P+LN
Sbjct: 146 KPGPNKPAIFMDCGFHAREWISHAFCQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNI 205
Query: 129 DGYVYSMTK 137
DGY+Y+ TK
Sbjct: 206 DGYIYTWTK 214
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 138 INSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPA 197
I ++ K + ++ + IG T G I +K+ G P I +D G HAREWI+ A
Sbjct: 110 IEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPGPNKPAIFMDCGFHAREWISHA 169
Query: 198 TVLYVLQQLV----ENPENFPMFRKVDWILIPMLNPDGYVYSMTK 238
+ +++ V K+D+ ++P+LN DGY+Y+ TK
Sbjct: 170 FCQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNIDGYIYTWTK 214
>pdb|1NSA|A Chain A, Three-Dimensional Structure Of Porcine Procarboxypeptidase
B: A Structural Basis Of Its Inactivity
Length = 395
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 52 VNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVEN--- 108
++ S IG T +G I +K+ G P I +D G HAREWI+ A + ++ V
Sbjct: 119 ISRSAIGTTFDGDNIYLLKVGKPGSNKPAIFMDCGFHAREWISQAFCQWFVRDAVRTYGY 178
Query: 109 -PENFPMFRKVDWILIPMLNPDGYVYSMTK 137
+D+ ++P+LN DGY+Y+ TK
Sbjct: 179 EAHMTEFLDNLDFYVLPVLNIDGYIYTWTK 208
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 153 VNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVEN--- 209
++ S IG T +G I +K+ G P I +D G HAREWI+ A + ++ V
Sbjct: 119 ISRSAIGTTFDGDNIYLLKVGKPGSNKPAIFMDCGFHAREWISQAFCQWFVRDAVRTYGY 178
Query: 210 -PENFPMFRKVDWILIPMLNPDGYVYSMTK 238
+D+ ++P+LN DGY+Y+ TK
Sbjct: 179 EAHMTEFLDNLDFYVLPVLNIDGYIYTWTK 208
>pdb|1Z5R|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
pdb|1Z5R|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
pdb|1Z5R|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
pdb|1ZG7|A Chain A, Crystal Structure Of 2-(5-{[amino(Imino)methyl]amino}-2-
Chlorophenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG7|B Chain B, Crystal Structure Of 2-(5-{[amino(Imino)methyl]amino}-2-
Chlorophenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG7|C Chain C, Crystal Structure Of 2-(5-{[amino(Imino)methyl]amino}-2-
Chlorophenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG8|A Chain A, Crystal Structure Of (R)-2-(3-{[amino(Imino)
Methyl]amino}phenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG8|B Chain B, Crystal Structure Of (R)-2-(3-{[amino(Imino)
Methyl]amino}phenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG8|C Chain C, Crystal Structure Of (R)-2-(3-{[amino(Imino)
Methyl]amino}phenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG9|A Chain A, Crystal Structure Of 5-{[amino(Imino)methyl]amino}-2-
(Sulfanylmethyl)pentanoic Acid Bound To Activated
Porcine Pancreatic Carboxypeptidase B
pdb|1ZG9|B Chain B, Crystal Structure Of 5-{[amino(Imino)methyl]amino}-2-
(Sulfanylmethyl)pentanoic Acid Bound To Activated
Porcine Pancreatic Carboxypeptidase B
pdb|1ZG9|C Chain C, Crystal Structure Of 5-{[amino(Imino)methyl]amino}-2-
(Sulfanylmethyl)pentanoic Acid Bound To Activated
Porcine Pancreatic Carboxypeptidase B
pdb|2JEW|A Chain A, Crystal Structure Of ( (2s)-5-Amino-2-((1-N-Propyl-1h-
Imidazol-4-Yl)methyl)pentanoic Acid) Uk396,082 A Tafia
Inhibitor, Bound To Activated Porcine Pancreatic
Carboxypeptidaseb
pdb|2PIY|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
(S)-2-(3-Aminomethyl-Phenyl)-3-{hydroxy-
[(R)-2-Methyl-1-(3-Phenyl-Propane-1-Sulfonylamino)-
Propyl]- Phosphinoyl}-Propionic Acid {zk 528} Complex
pdb|2PIY|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
(S)-2-(3-Aminomethyl-Phenyl)-3-{hydroxy-
[(R)-2-Methyl-1-(3-Phenyl-Propane-1-Sulfonylamino)-
Propyl]- Phosphinoyl}-Propionic Acid {zk 528} Complex
pdb|2PIY|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
(S)-2-(3-Aminomethyl-Phenyl)-3-{hydroxy-
[(R)-2-Methyl-1-(3-Phenyl-Propane-1-Sulfonylamino)-
Propyl]- Phosphinoyl}-Propionic Acid {zk 528} Complex
pdb|2PIZ|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Guanidino-Phenyl)-3-[hydroxy-(3-
Phenyl-Propyl)-Phosphinoyl]-Propionic Acid Complex
pdb|2PIZ|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Guanidino-Phenyl)-3-[hydroxy-(3-
Phenyl-Propyl)-Phosphinoyl]-Propionic Acid Complex
pdb|2PIZ|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Guanidino-Phenyl)-3-[hydroxy-(3-
Phenyl-Propyl)-Phosphinoyl]-Propionic Acid Complex
pdb|2PJ0|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-2-Methyl-
Propyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ0|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-2-Methyl-
Propyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ0|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-2-Methyl-
Propyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ1|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-aminomethyl-phenyl)-[((r)-1-
Benzyloxycarbonylamino-2-methyl-propyl)-hydroxy-
Phosphinoyloxy]-acetic Acid Complex
pdb|2PJ1|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-aminomethyl-phenyl)-[((r)-1-
Benzyloxycarbonylamino-2-methyl-propyl)-hydroxy-
Phosphinoyloxy]-acetic Acid Complex
pdb|2PJ1|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-aminomethyl-phenyl)-[((r)-1-
Benzyloxycarbonylamino-2-methyl-propyl)-hydroxy-
Phosphinoyloxy]-acetic Acid Complex
pdb|2PJ2|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzyloxycarbonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]-Propionic Acid Complex
pdb|2PJ2|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzyloxycarbonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]-Propionic Acid Complex
pdb|2PJ2|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzyloxycarbonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]-Propionic Acid Complex
pdb|2PJ3|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-Guanidino-Phenyl)-{hydroxy-[(R)-2-
Methyl-1-(3-Phenyl-Propionylamino)-Propyl]-
Phosphinoyloxy}- Acetic Acid Complex
pdb|2PJ3|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-Guanidino-Phenyl)-{hydroxy-[(R)-2-
Methyl-1-(3-Phenyl-Propionylamino)-Propyl]-
Phosphinoyloxy}- Acetic Acid Complex
pdb|2PJ3|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-Guanidino-Phenyl)-{hydroxy-[(R)-2-
Methyl-1-(3-Phenyl-Propionylamino)-Propyl]-
Phosphinoyloxy}- Acetic Acid Complex
pdb|2PJ4|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-Benzyloxycarbonylamino-Cyclohexyl-
Methyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ4|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-Benzyloxycarbonylamino-Cyclohexyl-
Methyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ5|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-Hexyl)-
Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJ5|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-Hexyl)-
Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJ5|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-Hexyl)-
Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJ6|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{hydroxy-
[(R)-2-Methyl-1-(2-Phenyl-Ethanesulfonylamino)-Propyl]-
Phosphinoyl}-Propionic Acid Complex
pdb|2PJ7|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzenesulfonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]- Propionic Acid Complex
pdb|2PJ7|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzenesulfonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]- Propionic Acid Complex
pdb|2PJ7|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzenesulfonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]- Propionic Acid Complex
pdb|2PJ8|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{[(R)-1-
(Biphenyl-4-Sulfonylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-Propionic Acid Complex
pdb|2PJ8|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{[(R)-1-
(Biphenyl-4-Sulfonylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-Propionic Acid Complex
pdb|2PJ8|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{[(R)-1-
(Biphenyl-4-Sulfonylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-Propionic Acid Complex
pdb|2PJ9|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{[(R)-1-
(Benzo[1,2,
5]thiadiazole-4-Sulfonylamino)-2-Methyl-Propyl]-
Hydroxy-Phosphinoyl}-Propionic Acid Complex
pdb|2PJA|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
3-{[(R)-1-((S)-2-Benzyloxycarbonylamino-
3-Phenyl-Propionylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-2-(3-Guanidino-Phenyl)-Propionic Acid
Complex
pdb|2PJA|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
3-{[(R)-1-((S)-2-Benzyloxycarbonylamino-
3-Phenyl-Propionylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-2-(3-Guanidino-Phenyl)-Propionic Acid
Complex
pdb|2PJA|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
3-{[(R)-1-((S)-2-Benzyloxycarbonylamino-
3-Phenyl-Propionylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-2-(3-Guanidino-Phenyl)-Propionic Acid
Complex
pdb|2PJB|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
2-(3-aminomethyl-phenyl)-3-{[1-((s)-2-
Benzyloxycarbonylamino-3-phenyl-propane-1-
sulfonylamino)-2-
Methyl-propyl]-hydroxy-phosphinoyl}-propionic Acid
Complex
pdb|2PJB|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
2-(3-aminomethyl-phenyl)-3-{[1-((s)-2-
Benzyloxycarbonylamino-3-phenyl-propane-1-
sulfonylamino)-2-
Methyl-propyl]-hydroxy-phosphinoyl}-propionic Acid
Complex
pdb|2PJB|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
2-(3-aminomethyl-phenyl)-3-{[1-((s)-2-
Benzyloxycarbonylamino-3-phenyl-propane-1-
sulfonylamino)-2-
Methyl-propyl]-hydroxy-phosphinoyl}-propionic Acid
Complex
pdb|2PJC|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
({(R)-1-[(S)-2-Benzyloxycarbonylamino-3-
(4-Hydroxy-Phenyl)-Propionylamino]-2-Methyl-Propyl}-
Hydroxy-Phosphinoyloxy)-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJC|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
({(R)-1-[(S)-2-Benzyloxycarbonylamino-3-
(4-Hydroxy-Phenyl)-Propionylamino]-2-Methyl-Propyl}-
Hydroxy-Phosphinoyloxy)-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJC|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
({(R)-1-[(S)-2-Benzyloxycarbonylamino-3-
(4-Hydroxy-Phenyl)-Propionylamino]-2-Methyl-Propyl}-
Hydroxy-Phosphinoyloxy)-(3-Guanidino-Phenyl)-Acetic Acid
Complex
Length = 306
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 35 QQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIA 94
+ I ++ K + ++ + IG T G I +K+ G P I +D G HAREWI+
Sbjct: 13 ETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPGPNKPAIFMDCGFHAREWIS 72
Query: 95 PATVLYVLQQLV----ENPENFPMFRKVDWILIPMLNPDGYVYSMTK 137
A + +++ V K+D+ ++P+LN DGY+Y+ TK
Sbjct: 73 HAFCQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNIDGYIYTWTK 119
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 138 INSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPA 197
I ++ K + ++ + IG T G I +K+ G P I +D G HAREWI+ A
Sbjct: 15 IEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPGPNKPAIFMDCGFHAREWISHA 74
Query: 198 TVLYVLQQLV----ENPENFPMFRKVDWILIPMLNPDGYVYSMTK 238
+ +++ V K+D+ ++P+LN DGY+Y+ TK
Sbjct: 75 FCQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNIDGYIYTWTK 119
>pdb|3D66|A Chain A, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3D66|B Chain B, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3D66|C Chain C, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3D67|A Chain A, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi) In Complex With
2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
pdb|3D67|B Chain B, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi) In Complex With
2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
pdb|3D67|C Chain C, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi) In Complex With
2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
Length = 424
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 133 YSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKIS-HGGVGNPIIVLDGGIHAR 191
+S+ +I S+++ I + + IG + E P+ +K+S I +D GIHAR
Sbjct: 125 HSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQTAKNAIWIDCGIHAR 184
Query: 192 EWIAPATVLYVLQQLVEN----PENFPMFRKVDWILIPMLNPDGYVYSMTK 238
EWI+PA L+ + + + + + R VD+ ++P++N DGY YS K
Sbjct: 185 EWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKK 235
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 28 NHVEKVHQ--QINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKIS-HGGVGNPIIVLD 84
++ E+ H +I S+++ I + + IG + E P+ +K+S I +D
Sbjct: 119 SYYEQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQTAKNAIWID 178
Query: 85 GGIHAREWIAPATVLYVLQQLVEN----PENFPMFRKVDWILIPMLNPDGYVYSMTK 137
GIHAREWI+PA L+ + + + + + R VD+ ++P++N DGY YS K
Sbjct: 179 CGIHAREWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKK 235
>pdb|3D68|A Chain A, Crystal Structure Of A T325i/t329i/h333y/h335q Mutant Of
Thrombin- Activatable Fibrinolysis Inhibitor (tafi-iiyq)
pdb|3D68|B Chain B, Crystal Structure Of A T325i/t329i/h333y/h335q Mutant Of
Thrombin- Activatable Fibrinolysis Inhibitor (tafi-iiyq)
pdb|3D68|C Chain C, Crystal Structure Of A T325i/t329i/h333y/h335q Mutant Of
Thrombin- Activatable Fibrinolysis Inhibitor (tafi-iiyq)
Length = 424
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 133 YSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKIS-HGGVGNPIIVLDGGIHAR 191
+S+ +I S+++ I + + IG + E P+ +K+S I +D GIHAR
Sbjct: 125 HSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQTAKNAIWIDCGIHAR 184
Query: 192 EWIAPATVLYVLQQLVEN----PENFPMFRKVDWILIPMLNPDGYVYSMTK 238
EWI+PA L+ + + + + + R VD+ ++P++N DGY YS K
Sbjct: 185 EWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKK 235
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 28 NHVEKVHQ--QINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKIS-HGGVGNPIIVLD 84
++ E+ H +I S+++ I + + IG + E P+ +K+S I +D
Sbjct: 119 SYYEQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQTAKNAIWID 178
Query: 85 GGIHAREWIAPATVLYVLQQLVEN----PENFPMFRKVDWILIPMLNPDGYVYSMTK 137
GIHAREWI+PA L+ + + + + + R VD+ ++P++N DGY YS K
Sbjct: 179 CGIHAREWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKK 235
>pdb|3LMS|A Chain A, Structure Of Human Activated Thrombin-Activatable
Fibrinolys Inhibitor, Tafia, In Complex With
Tick-Derived Funnelin Inh Tci
Length = 309
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 133 YSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKIS-HGGVGNPIIVLDGGIHAR 191
+S+ +I S+++ I + + IG + E P+ +K+S I +D GIHAR
Sbjct: 10 HSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQAAKNAIWIDCGIHAR 69
Query: 192 EWIAPATVLYVLQQLVEN----PENFPMFRKVDWILIPMLNPDGYVYSMTK 238
EWI+PA L+ + + + + + R VD+ ++P++N DGY YS K
Sbjct: 70 EWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKK 120
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 28 NHVEKVHQ--QINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKIS-HGGVGNPIIVLD 84
++ E+ H +I S+++ I + + IG + E P+ +K+S I +D
Sbjct: 4 SYYEQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQAAKNAIWID 63
Query: 85 GGIHAREWIAPATVLYVLQQLVEN----PENFPMFRKVDWILIPMLNPDGYVYSMTK 137
GIHAREWI+PA L+ + + + + + R VD+ ++P++N DGY YS K
Sbjct: 64 CGIHAREWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKK 120
>pdb|3DGV|A Chain A, Crystal Structure Of Thrombin Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3DGV|B Chain B, Crystal Structure Of Thrombin Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3DGV|C Chain C, Crystal Structure Of Thrombin Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3OSL|A Chain A, Structure Of Bovine Thrombin-Activatable Fibrinolysis
Inhibitor In Complex With Tick Carboxypeptidase
Inhibitor
pdb|3OSL|C Chain C, Structure Of Bovine Thrombin-Activatable Fibrinolysis
Inhibitor In Complex With Tick Carboxypeptidase
Inhibitor
Length = 401
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 7/141 (4%)
Query: 105 LVENPENFPMFRKVDWILIPMLNPDGY--VYSMTKINSYLKHIARIYGHKVNVSTIGETI 162
LVEN E+ + + + P + Y +S+ +I S+++ + Y V IG +
Sbjct: 72 LVENVEDLIRQQTSNDTISPRASSSYYEQYHSLNEIYSWIEVMTERYPDMVEKIHIGSSY 131
Query: 163 EGRPIQAVKISHG-GVGNPIIVLDGGIHAREWIAPATVLYVLQQLV----ENPENFPMFR 217
E P+ +K+S + +D GIHAREWI+PA L+ + + + + + +
Sbjct: 132 EKYPLYVLKVSKKEQRAKNAMWIDCGIHAREWISPAFCLWFVGSVTYYYGKEKMHTNLLK 191
Query: 218 KVDWILIPMLNPDGYVYSMTK 238
+D+ ++P++N DGY Y+ K
Sbjct: 192 HMDFYIMPVVNVDGYDYTWKK 212
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 28 NHVEKVHQ--QINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHG-GVGNPIIVLD 84
++ E+ H +I S+++ + Y V IG + E P+ +K+S + +D
Sbjct: 96 SYYEQYHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKEQRAKNAMWID 155
Query: 85 GGIHAREWIAPATVLYVLQQLV----ENPENFPMFRKVDWILIPMLNPDGYVYSMTK 137
GIHAREWI+PA L+ + + + + + + +D+ ++P++N DGY Y+ K
Sbjct: 156 CGIHAREWISPAFCLWFVGSVTYYYGKEKMHTNLLKHMDFYIMPVVNVDGYDYTWKK 212
>pdb|3D4U|A Chain A, Bovine Thrombin-Activatable Fibrinolysis Inhibitor (Tafia)
In Complex With Tick-Derived Carboxypeptidase Inhibitor
Length = 309
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 133 YSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHG-GVGNPIIVLDGGIHAR 191
+S+ +I S+++ + Y V IG + E P+ +K+S + +D GIHAR
Sbjct: 10 HSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKEQRAKNAMWIDCGIHAR 69
Query: 192 EWIAPATVLYVLQQLV----ENPENFPMFRKVDWILIPMLNPDGYVYSMTK 238
EWI+PA L+ + + + + + + +D+ ++P++N DGY Y+ K
Sbjct: 70 EWISPAFCLWFVGSVTYYYGKEKMHTNLLKHMDFYIMPVVNVDGYDYTWKK 120
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 28 NHVEKVHQ--QINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHG-GVGNPIIVLD 84
++ E+ H +I S+++ + Y V IG + E P+ +K+S + +D
Sbjct: 4 SYYEQYHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKEQRAKNAMWID 63
Query: 85 GGIHAREWIAPATVLYVLQQLV----ENPENFPMFRKVDWILIPMLNPDGYVYSMTK 137
GIHAREWI+PA L+ + + + + + + +D+ ++P++N DGY Y+ K
Sbjct: 64 CGIHAREWISPAFCLWFVGSVTYYYGKEKMHTNLLKHMDFYIMPVVNVDGYDYTWKK 120
>pdb|1CPB|A Chain A, Structure Of Carboxypeptidase B At 2.8 Angstroms
Resolution
Length = 82
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 35 QQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIA 94
+ I ++ + +A ++ S IG T G I +K+ G P + +D G HAREWI+
Sbjct: 13 ETIEAWTEQVASENPDLISRSAIGTTFLGNTIYLLKVGKPGSNKPAVFMDCGFHAREWIS 72
Query: 95 PATVLYVLQQ 104
PA + +++
Sbjct: 73 PAFCQWFVRE 82
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 138 INSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPA 197
I ++ + +A ++ S IG T G I +K+ G P + +D G HAREWI+PA
Sbjct: 15 IEAWTEQVASENPDLISRSAIGTTFLGNTIYLLKVGKPGSNKPAVFMDCGFHAREWISPA 74
Query: 198 TVLYVLQQ 205
+ +++
Sbjct: 75 FCQWFVRE 82
>pdb|3MN8|A Chain A, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
pdb|3MN8|B Chain B, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
pdb|3MN8|C Chain C, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
pdb|3MN8|D Chain D, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
Length = 435
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 34 HQQINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHG----GVGNPIIVLDGGIHA 89
+Q+ + + Y ++ V +G ++EGR + A++IS + P + +H
Sbjct: 43 QEQLEDLFAGLEKAYPNQAKVHFLGRSLEGRNLLALQISRNTRSRNLLTPPVKYIANMHG 102
Query: 90 REWIAPATVLYVLQQLVENPENFP----MFRKVDWILIPMLNPDGYVYS 134
E + ++Y+ Q L+ N E + D L+P +NPDGY S
Sbjct: 103 DETVGRQLLVYMAQYLLGNHERISDLGQLVNSTDIYLVPTMNPDGYALS 151
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Query: 134 SMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHG----GVGNPIIVLDGGIH 189
S ++ + + Y ++ V +G ++EGR + A++IS + P + +H
Sbjct: 42 SQEQLEDLFAGLEKAYPNQAKVHFLGRSLEGRNLLALQISRNTRSRNLLTPPVKYIANMH 101
Query: 190 AREWIAPATVLYVLQQLVENPENFP----MFRKVDWILIPMLNPDGYVYS 235
E + ++Y+ Q L+ N E + D L+P +NPDGY S
Sbjct: 102 GDETVGRQLLVYMAQYLLGNHERISDLGQLVNSTDIYLVPTMNPDGYALS 151
>pdb|3L2N|A Chain A, Crystal Structure Of Putative Carboxypeptidase A
(yp_562911.1) From Shewanella Denitrificans Os-217 At
2.39 A Resolution
pdb|3L2N|B Chain B, Crystal Structure Of Putative Carboxypeptidase A
(yp_562911.1) From Shewanella Denitrificans Os-217 At
2.39 A Resolution
Length = 395
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 39 SYLKHIARIYGHKVN--VST--IGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIA 94
SY +H+ I +++ VST +G T++GR VK+ I + H E A
Sbjct: 132 SYERHLDLISAVQLHPLVSTEHLGLTLDGRDXTLVKVGDDDPSKKSIWITARQHPGETXA 191
Query: 95 PATVLYVLQQLVEN--PENFPMFRKVDWILIPMLNPDGYVYSMTKINSYLKHIAR 147
V +L QL++N P + + K ++ ++P NPDG V + N+ ++ R
Sbjct: 192 EWLVEGLLNQLLDNDCPTSKALLDKANFYIVPNXNPDGSVRGHLRTNAVGANLNR 246
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 107 ENPENFPMFRKVDWILIPMLNPDGYVYSMTKIN------------SYLKHIARIYGHKVN 154
E+ + + + W +P DG + +++ SY +H+ I +++
Sbjct: 87 EDYQAVASYDRQTWFRLPTEYKDGKLSISVELDCEAIQIAYFTPYSYERHLDLISAVQLH 146
Query: 155 --VST--IGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLVEN- 209
VST +G T++GR VK+ I + H E A V +L QL++N
Sbjct: 147 PLVSTEHLGLTLDGRDXTLVKVGDDDPSKKSIWITARQHPGETXAEWLVEGLLNQLLDND 206
Query: 210 -PENFPMFRKVDWILIPMLNPDGYV 233
P + + K ++ ++P NPDG V
Sbjct: 207 CPTSKALLDKANFYIVPNXNPDGSV 231
>pdb|2NSM|A Chain A, Crystal Structure Of The Human Carboxypeptidase N
(kininase I) Catalytic Domain
Length = 439
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 129 DGYVYSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKIS-HGGVGNPI---IVL 184
D V ++ K+ + I R+Y +IG ++EGR + ++ S H G+ P+ +
Sbjct: 10 DDLVRTLYKVQNECPGITRVY-------SIGRSVEGRHLYVLEFSDHPGIHEPLEPEVKY 62
Query: 185 DGGIHAREWIAPATVLYVLQQLVENPEN-----FPMFRKVDWILIPMLNPDGY 232
G +H E + +L + + L E N + + ++P +NPDGY
Sbjct: 63 VGNMHGNEALGRELMLQLSEFLCEEFRNRNQRIVQLIQDTRIHILPSMNPDGY 115
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 54 VSTIGETIEGRPIQAVKIS-HGGVGNPI---IVLDGGIHAREWIAPATVLYVLQQLVENP 109
V +IG ++EGR + ++ S H G+ P+ + G +H E + +L + + L E
Sbjct: 29 VYSIGRSVEGRHLYVLEFSDHPGIHEPLEPEVKYVGNMHGNEALGRELMLQLSEFLCEEF 88
Query: 110 EN-----FPMFRKVDWILIPMLNPDGY 131
N + + ++P +NPDGY
Sbjct: 89 RNRNQRIVQLIQDTRIHILPSMNPDGY 115
>pdb|1QMU|A Chain A, Duck Carboxypeptidase D Domain Ii
pdb|1H8L|A Chain A, Duck Carboxypeptidase D Domain Ii In Complex With Gemsa
Length = 380
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 40 YLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHG----GVGNPIIVLDGGIHAREWIAP 95
+L+ A Y + ++G+++E R + ++IS G P G +H E +
Sbjct: 19 FLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGIHEAGEPEFKYIGNMHGNEVVGR 78
Query: 96 ATVLYVLQQLVEN----PENFPMFRKVDWILIPMLNPDGYVYSM 135
+L +++ L +N PE + + ++P +NPDGY S
Sbjct: 79 ELLLNLIEYLCKNFGTDPEVTDLVQSTRIHIMPSMNPDGYEKSQ 122
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 141 YLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHG----GVGNPIIVLDGGIHAREWIAP 196
+L+ A Y + ++G+++E R + ++IS G P G +H E +
Sbjct: 19 FLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGIHEAGEPEFKYIGNMHGNEVVGR 78
Query: 197 ATVLYVLQQLVEN----PENFPMFRKVDWILIPMLNPDGYVYSM 236
+L +++ L +N PE + + ++P +NPDGY S
Sbjct: 79 ELLLNLIEYLCKNFGTDPEVTDLVQSTRIHIMPSMNPDGYEKSQ 122
>pdb|2QVP|A Chain A, Crystal Structure Of A Putative Metallopeptidase
(Sama_0725) From Shewanella Amazonensis Sb2b At 2.00 A
Resolution
pdb|2QVP|B Chain B, Crystal Structure Of A Putative Metallopeptidase
(Sama_0725) From Shewanella Amazonensis Sb2b At 2.00 A
Resolution
pdb|2QVP|C Chain C, Crystal Structure Of A Putative Metallopeptidase
(Sama_0725) From Shewanella Amazonensis Sb2b At 2.00 A
Resolution
Length = 275
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 76 VGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFRKVDWILIPMLNPDGYV 132
G P +++ G H E P +L+ L QL + +F++V+ ++P++NP G+
Sbjct: 63 AGLPNLLISAGFHGEESAGPWGLLHFLSQL-----DGELFKRVNLSVLPLVNPTGFA 114
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 177 VGNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFRKVDWILIPMLNPDGYV 233
G P +++ G H E P +L+ L QL + +F++V+ ++P++NP G+
Sbjct: 63 AGLPNLLISAGFHGEESAGPWGLLHFLSQL-----DGELFKRVNLSVLPLVNPTGFA 114
>pdb|3IEH|A Chain A, Crystal Structure Of Putative Metallopeptidase
(Yp_001051774.1) From Shewanella Baltica Os155 At 2.45 A
Resolution
Length = 276
Score = 34.3 bits (77), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 77 GNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFRKVDWILIPMLNPDGY 131
G P +++ G H E P +L+ L + + +F +V+ L+P++NP G+
Sbjct: 65 GLPSLLISAGFHGEESAGPWGLLHFLSEASAD-----LFERVNLSLLPLVNPTGF 114
Score = 34.3 bits (77), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 178 GNPIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFRKVDWILIPMLNPDGY 232
G P +++ G H E P +L+ L + + +F +V+ L+P++NP G+
Sbjct: 65 GLPSLLISAGFHGEESAGPWGLLHFLSEASAD-----LFERVNLSLLPLVNPTGF 114
>pdb|1UWY|A Chain A, Crystal Structure Of Human Carboxypeptidase M
Length = 426
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 34 HQQ--INSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKI----SHGGVGNPIIVLDGGI 87
H+Q + ++LK +A+ Y ++ +IG++++GR + + + +G P +
Sbjct: 6 HRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFPKEHRIGIPEFKYVANM 65
Query: 88 HAREWIAPATVLYVLQQLV----ENPENFPMFRKVDWILIPMLNPDGY 131
H E + +L+++ LV ++PE + ++P +NPDG+
Sbjct: 66 HGDETVGRELLLHLIDYLVTSDGKDPEITNLINSTRIHIMPSMNPDGF 113
Score = 33.5 bits (75), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 138 INSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKI----SHGGVGNPIIVLDGGIHAREW 193
+ ++LK +A+ Y ++ +IG++++GR + + + +G P +H E
Sbjct: 11 MEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFPKEHRIGIPEFKYVANMHGDET 70
Query: 194 IAPATVLYVLQQLV----ENPENFPMFRKVDWILIPMLNPDGY 232
+ +L+++ LV ++PE + ++P +NPDG+
Sbjct: 71 VGRELLLHLIDYLVTSDGKDPEITNLINSTRIHIMPSMNPDGF 113
>pdb|3QNV|A Chain A, Carboxypeptidase T
pdb|4DJL|A Chain A, Carboxypeptidase T With N-sulfamoyl-l-phenylalanine
Length = 323
Score = 33.9 bits (76), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 137 KINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGN----PIIVLDGGIHARE 192
KIN+ +A Y + V +IG++ EGR + AVKIS VG P ++ HARE
Sbjct: 18 KINT----VASNYPNIVKKFSIGKSYEGRELWAVKISD-NVGTDENEPEVLYTALHHARE 72
Query: 193 WIAPATVLYVLQQLVEN 209
+ LY L +N
Sbjct: 73 HLTVEMALYTLDLFTQN 89
Score = 33.5 bits (75), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 44 IARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGN----PIIVLDGGIHAREWIAPATVL 99
+A Y + V +IG++ EGR + AVKIS VG P ++ HARE + L
Sbjct: 22 VASNYPNIVKKFSIGKSYEGRELWAVKISD-NVGTDENEPEVLYTALHHAREHLTVEMAL 80
Query: 100 YVLQQLVEN 108
Y L +N
Sbjct: 81 YTLDLFTQN 89
>pdb|1OBR|A Chain A, Carboxypeptidase T
pdb|3V7Z|A Chain A, Carboxypeptidase T With Gemsa
pdb|4DUK|A Chain A, Carboxypeptidase T With L-benzylsuccinic Acid
Length = 326
Score = 33.9 bits (76), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 137 KINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGN----PIIVLDGGIHARE 192
KIN+ +A Y + V +IG++ EGR + AVKIS VG P ++ HARE
Sbjct: 18 KINT----VASNYPNIVKKFSIGKSYEGRELWAVKISD-NVGTDENEPEVLYTALHHARE 72
Query: 193 WIAPATVLYVLQQLVEN 209
+ LY L +N
Sbjct: 73 HLTVEMALYTLDLFTQN 89
Score = 33.5 bits (75), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 44 IARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGN----PIIVLDGGIHAREWIAPATVL 99
+A Y + V +IG++ EGR + AVKIS VG P ++ HARE + L
Sbjct: 22 VASNYPNIVKKFSIGKSYEGRELWAVKISD-NVGTDENEPEVLYTALHHAREHLTVEMAL 80
Query: 100 YVLQQLVEN 108
Y L +N
Sbjct: 81 YTLDLFTQN 89
>pdb|3V38|A Chain A, Carboxypeptidase T Mutant L254n
Length = 326
Score = 33.9 bits (76), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 137 KINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGN----PIIVLDGGIHARE 192
KIN+ +A Y + V +IG++ EGR + AVKIS VG P ++ HARE
Sbjct: 18 KINT----VASNYPNIVKKFSIGKSYEGRELWAVKISD-NVGTDENEPEVLYTALHHARE 72
Query: 193 WIAPATVLYVLQQLVEN 209
+ LY L +N
Sbjct: 73 HLTVEMALYTLDLFTQN 89
Score = 33.5 bits (75), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 44 IARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGN----PIIVLDGGIHAREWIAPATVL 99
+A Y + V +IG++ EGR + AVKIS VG P ++ HARE + L
Sbjct: 22 VASNYPNIVKKFSIGKSYEGRELWAVKISD-NVGTDENEPEVLYTALHHAREHLTVEMAL 80
Query: 100 YVLQQLVEN 108
Y L +N
Sbjct: 81 YTLDLFTQN 89
>pdb|3PRT|A Chain A, Mutant Of The Carboxypeptidase T
Length = 323
Score = 33.9 bits (76), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 137 KINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGN----PIIVLDGGIHARE 192
KIN+ +A Y + V +IG++ EGR + AVKIS VG P ++ HARE
Sbjct: 18 KINT----VASNYPNIVKKFSIGKSYEGRELWAVKISD-NVGTDENEPEVLYTALHHARE 72
Query: 193 WIAPATVLYVLQQLVEN 209
+ LY L +N
Sbjct: 73 HLTVEMALYTLDLFTQN 89
Score = 33.5 bits (75), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 44 IARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGN----PIIVLDGGIHAREWIAPATVL 99
+A Y + V +IG++ EGR + AVKIS VG P ++ HARE + L
Sbjct: 22 VASNYPNIVKKFSIGKSYEGRELWAVKISD-NVGTDENEPEVLYTALHHAREHLTVEMAL 80
Query: 100 YVLQQLVEN 108
Y L +N
Sbjct: 81 YTLDLFTQN 89
>pdb|4A37|A Chain A, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa
pdb|4A37|B Chain B, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa
pdb|4A38|A Chain A, Metallo-Carboxypeptidase From Pseudomonas Aureginosa In
Complex With L-Benzylsuccinic Acid
pdb|4A38|B Chain B, Metallo-Carboxypeptidase From Pseudomonas Aureginosa In
Complex With L-Benzylsuccinic Acid
pdb|4A39|A Chain A, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa In
Complex With (2-Guanidinoethylmercapto)succinic Acid
pdb|4A39|B Chain B, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa In
Complex With (2-Guanidinoethylmercapto)succinic Acid
Length = 388
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 12/101 (11%)
Query: 56 TIGETIEGRPIQAVKIS-HGGVGNPIIVLDG---GIHAREWIAPATVLYVLQQLVENPEN 111
+G +++GR I+ +++ H + V+ G H EW + + ++ P++
Sbjct: 148 AVGTSVQGRDIELLRVRRHPDSHLKLWVIAQQHPGEHMAEWFMEGLI-----ERLQRPDD 202
Query: 112 FPMFR---KVDWILIPMLNPDGYVYSMTKINSYLKHIARIY 149
M R K D L+P +NPDG + + N+ + + R +
Sbjct: 203 TEMQRLLEKADLYLVPNMNPDGAFHGNLRTNAAGQDLNRAW 243
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 12/85 (14%)
Query: 157 TIGETIEGRPIQAVKIS-HGGVGNPIIVLDG---GIHAREWIAPATVLYVLQQLVENPEN 212
+G +++GR I+ +++ H + V+ G H EW + + ++ P++
Sbjct: 148 AVGTSVQGRDIELLRVRRHPDSHLKLWVIAQQHPGEHMAEWFMEGLI-----ERLQRPDD 202
Query: 213 FPMFR---KVDWILIPMLNPDGYVY 234
M R K D L+P +NPDG +
Sbjct: 203 TEMQRLLEKADLYLVPNMNPDGAFH 227
>pdb|3B2Y|A Chain A, Crystal Structure Of A Putative Metallopeptidase
(Sden_2526) From Shewanella Denitrificans Os217 At 1.74
A Resolution
pdb|3B2Y|B Chain B, Crystal Structure Of A Putative Metallopeptidase
(Sden_2526) From Shewanella Denitrificans Os217 At 1.74
A Resolution
Length = 275
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 79 PIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFRKVDWILIPMLNPDGY 131
P +++ G H E P L+ L+ L +F +V+ L+P++NP G+
Sbjct: 67 PSLLISSGFHGEEAAGPWGXLHFLRGLQP-----ALFERVNLSLLPLVNPTGF 114
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 180 PIIVLDGGIHAREWIAPATVLYVLQQLVENPENFPMFRKVDWILIPMLNPDGY 232
P +++ G H E P L+ L+ L +F +V+ L+P++NP G+
Sbjct: 67 PSLLISSGFHGEEAAGPWGXLHFLRGLQP-----ALFERVNLSLLPLVNPTGF 114
>pdb|1R5M|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Sif2
Length = 425
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 37 INSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGGVGNPIIVLDGGIHAREWIAPA 96
I+ + R++ K N ++G PI A +IS G + +DG ++
Sbjct: 304 ISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVN-------- 355
Query: 97 TVLYVLQQLVENPENFPMFRKVDWILIPMLNPDGYVYSMTKINSYLKHIA-RIYGHKVNV 155
+Y L++L N ++ ++ D IL P+ P Y ++ N Y+ ++ G+K++V
Sbjct: 356 --VYDLKKL--NSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISV 411
Query: 156 S 156
+
Sbjct: 412 A 412
>pdb|2EX2|A Chain A, Crystal Structure Of Penicillin Binding Protein 4 (Dacb)
From Escherichia Coli
pdb|2EX6|A Chain A, Crystal Structure Of Penicillin Binding Protein 4 (Dacb)
From Escherichia Coli, Complexed With Ampicillin
pdb|2EX8|A Chain A, Crystal Structure Of Penicillin Binding Protein 4 (Dacb)
From Escherichia Coli, Complexed With Penicillin-G
pdb|2EX9|A Chain A, Crystal Structure Of Penicillin Binding Protein 4 (Dacb)
From Escherichia Coli, Complexed With Penicillin-V
pdb|2EXA|A Chain A, Crystal Structure Of Penicillin Binding Protein 4 (Dacb)
From Escherichia Coli, Complexed With Farom
pdb|2EXB|A Chain A, Crystal Structure Of Penicillin Binding Protein 4 (Dacb)
From Escherichia Coli, Complexed With Flomox
Length = 458
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 76 VGNPIIVLDGGIHAREWIAPATVLYVLQQLV--ENPENF 112
+GN II G+ IAPAT++ VLQ + +N NF
Sbjct: 329 IGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNF 367
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 177 VGNPIIVLDGGIHAREWIAPATVLYVLQQLV--ENPENF 213
+GN II G+ IAPAT++ VLQ + +N NF
Sbjct: 329 IGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNF 367
>pdb|3K2K|A Chain A, Crystal Structure Of Putative Carboxypeptidase
(Yp_103406.1) From Burkholderia Mallei Atcc 23344 At
2.49 A Resolution
Length = 403
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Query: 51 KVNVSTIGETIEGRPIQAVKI---SHGGVGNPIIVLDGGIHAREWIAPATVLYVLQQLV- 106
+ +V +G T+EGRP V + G + + H E A + ++++LV
Sbjct: 150 QASVVELGRTVEGRPXSLVVLGTPDEAGAAKKKVWIIARQHPGESXAEWFIEGLVKRLVG 209
Query: 107 -----ENPENFPMFRKVDWILIPMLNPDGYVYSMTKINSYLKHIAR 147
+P ++ + ++P NPDG V+ + N+ ++ R
Sbjct: 210 WGDWSGDPVARKLYDHATFYIVPNXNPDGSVHGNLRTNAAGANLNR 255
>pdb|4H3W|A Chain A, Crystal Structure Of A Hypothetical Protein (Bdi_1231)
From Parabacteroides Distasonis Atcc 8503 At 2.00 A
Resolution
pdb|4H3W|B Chain B, Crystal Structure Of A Hypothetical Protein (Bdi_1231)
From Parabacteroides Distasonis Atcc 8503 At 2.00 A
Resolution
Length = 330
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 84 DGGIHAREWIAPATVLYVLQQLVENPENFPMFRKVD 119
D + W+AP YV V N E P R+VD
Sbjct: 10 DDAVXGESWVAPLGXGYVTSDDVVNVEXVPSIREVD 45
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 185 DGGIHAREWIAPATVLYVLQQLVENPENFPMFRKVD 220
D + W+AP YV V N E P R+VD
Sbjct: 10 DDAVXGESWVAPLGXGYVTSDDVVNVEXVPSIREVD 45
>pdb|1CPB|B Chain B, Structure Of Carboxypeptidase B At 2.8 Angstroms
Resolution
Length = 217
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 117 KVDWILIPMLNPDGYVYSMTKINSYLKHIARIYGHKVNVSTIGETIEGRPIQAVKISHGG 176
K+D+ ++P++N DGY+Y+ T + K + G S+ T R A S G
Sbjct: 10 KLDFYVLPVVNIDGYIYTWTTNRMWRKTRSTRAG-----SSCTGTDLNRNFDAGWCSIGA 64
Query: 177 VGNPI 181
NP
Sbjct: 65 SNNPC 69
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.140 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,797,924
Number of Sequences: 62578
Number of extensions: 341390
Number of successful extensions: 887
Number of sequences better than 100.0: 51
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 767
Number of HSP's gapped (non-prelim): 100
length of query: 238
length of database: 14,973,337
effective HSP length: 96
effective length of query: 142
effective length of database: 8,965,849
effective search space: 1273150558
effective search space used: 1273150558
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)